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author | Alyssa Ross <hi@alyssa.is> | 2023-06-16 06:56:35 +0000 |
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committer | Alyssa Ross <hi@alyssa.is> | 2023-06-16 06:56:35 +0000 |
commit | 99fcaeccb89621dd492203ce1f2d551c06f228ed (patch) | |
tree | 41cb730ae07383004789779b0f6e11cb3f4642a3 /nixpkgs/pkgs/development/python-modules/cnvkit/default.nix | |
parent | 59c5f5ac8682acc13bb22bc29c7cf02f7d75f01f (diff) | |
parent | 75a5ebf473cd60148ba9aec0d219f72e5cf52519 (diff) | |
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Merge branch 'nixos-unstable' of https://github.com/NixOS/nixpkgs
Conflicts: nixpkgs/nixos/modules/config/console.nix nixpkgs/nixos/modules/services/mail/mailman.nix nixpkgs/nixos/modules/services/mail/public-inbox.nix nixpkgs/nixos/modules/services/mail/rss2email.nix nixpkgs/nixos/modules/services/networking/ssh/sshd.nix nixpkgs/pkgs/applications/networking/instant-messengers/dino/default.nix nixpkgs/pkgs/applications/networking/irc/weechat/default.nix nixpkgs/pkgs/applications/window-managers/sway/default.nix nixpkgs/pkgs/build-support/go/module.nix nixpkgs/pkgs/build-support/rust/build-rust-package/default.nix nixpkgs/pkgs/development/interpreters/python/default.nix nixpkgs/pkgs/development/node-packages/overrides.nix nixpkgs/pkgs/development/tools/b4/default.nix nixpkgs/pkgs/servers/dict/dictd-db.nix nixpkgs/pkgs/servers/mail/public-inbox/default.nix nixpkgs/pkgs/tools/security/pinentry/default.nix nixpkgs/pkgs/tools/text/unoconv/default.nix nixpkgs/pkgs/top-level/all-packages.nix
Diffstat (limited to 'nixpkgs/pkgs/development/python-modules/cnvkit/default.nix')
-rw-r--r-- | nixpkgs/pkgs/development/python-modules/cnvkit/default.nix | 15 |
1 files changed, 10 insertions, 5 deletions
diff --git a/nixpkgs/pkgs/development/python-modules/cnvkit/default.nix b/nixpkgs/pkgs/development/python-modules/cnvkit/default.nix index 36e4bcf2760d..35195b1db529 100644 --- a/nixpkgs/pkgs/development/python-modules/cnvkit/default.nix +++ b/nixpkgs/pkgs/development/python-modules/cnvkit/default.nix @@ -16,18 +16,22 @@ , pomegranate , pyfaidx , python +, pythonOlder , R }: buildPythonPackage rec { - pname = "CNVkit"; - version = "0.9.9"; + pname = "cnvkit"; + version = "0.9.10"; + format = "setuptools"; + + disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "etal"; repo = "cnvkit"; - rev = "v${version}"; - sha256 = "1q4l7jhr1k135an3n9aa9wsid5lk6fwxb0hcldrr6v6y76zi4gj1"; + rev = "refs/tags/v${version}"; + hash = "sha256-mCQXo3abwC06x/g51UBshqUk3dpqEVNUvx+cJ/EdYGQ="; }; postPatch = '' @@ -55,7 +59,7 @@ buildPythonPackage rec { rPackages.DNAcopy ]; - checkInputs = [ R ]; + nativeCheckInputs = [ R ]; checkPhase = '' pushd test/ @@ -74,6 +78,7 @@ buildPythonPackage rec { meta = with lib; { homepage = "https://cnvkit.readthedocs.io"; description = "A Python library and command-line software toolkit to infer and visualize copy number from high-throughput DNA sequencing data"; + changelog = "https://github.com/etal/cnvkit/releases/tag/v${version}"; license = licenses.asl20; maintainers = [ maintainers.jbedo ]; }; |