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| author | Alyssa Ross <hi@alyssa.is> | 2022-02-22 10:43:06 +0000 |
|---|---|---|
| committer | Alyssa Ross <hi@alyssa.is> | 2022-03-11 16:17:56 +0000 |
| commit | ca1aada113c0ebda1ab8667199f6453f8e01c4fc (patch) | |
| tree | 55e402280096f62eb0bc8bcad5ce6050c5a0aec7 /nixpkgs/pkgs/development/python-modules/batchgenerators/default.nix | |
| parent | e4df5a52a6a6531f32626f57205356a773ac2975 (diff) | |
| parent | 93883402a445ad467320925a0a5dbe43a949f25b (diff) | |
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Merge commit '93883402a445ad467320925a0a5dbe43a949f25b'
Conflicts: nixpkgs/nixos/modules/programs/ssh.nix nixpkgs/pkgs/applications/networking/browsers/firefox/packages.nix nixpkgs/pkgs/data/fonts/noto-fonts/default.nix nixpkgs/pkgs/development/go-modules/generic/default.nix nixpkgs/pkgs/development/interpreters/ruby/default.nix nixpkgs/pkgs/development/libraries/mesa/default.nix
Diffstat (limited to 'nixpkgs/pkgs/development/python-modules/batchgenerators/default.nix')
| -rw-r--r-- | nixpkgs/pkgs/development/python-modules/batchgenerators/default.nix | 46 |
1 files changed, 36 insertions, 10 deletions
diff --git a/nixpkgs/pkgs/development/python-modules/batchgenerators/default.nix b/nixpkgs/pkgs/development/python-modules/batchgenerators/default.nix index 336c6b2e5134..a20d0c696cd6 100644 --- a/nixpkgs/pkgs/development/python-modules/batchgenerators/default.nix +++ b/nixpkgs/pkgs/development/python-modules/batchgenerators/default.nix @@ -1,12 +1,12 @@ { lib , buildPythonPackage -, isPy27 +, pythonOlder , fetchFromGitHub , pytestCheckHook -, unittest2 , future , numpy , pillow +, fetchpatch , scipy , scikit-learn , scikitimage @@ -16,27 +16,53 @@ buildPythonPackage rec { pname = "batchgenerators"; version = "0.21"; + format = "setuptools"; - disabled = isPy27; + disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "MIC-DKFZ"; repo = pname; rev = "v${version}"; - sha256 = "16bk4r0q3m2c9fawpmj4l7kz0x3fyv1spb92grf44gmyricq3jdb"; - + hash = "sha256-q8mBWcy+PkJcfiKtq8P2bnTw56FE1suVS0zUgUEmc5k="; }; propagatedBuildInputs = [ - future numpy pillow scipy scikit-learn scikitimage threadpoolctl + future + numpy + pillow + scipy + scikit-learn + scikitimage + threadpoolctl + ]; + + checkInputs = [ + pytestCheckHook ]; - checkInputs = [ pytestCheckHook unittest2 ]; + patches = [ + # Remove deprecated unittest2, https://github.com/MIC-DKFZ/batchgenerators/pull/78 + (fetchpatch { + name = "remove-unittest2.patch"; + url = "https://github.com/MIC-DKFZ/batchgenerators/commit/87a9437057df8a7550aa3b3eaf840871cc0d5cef.patch"; + sha256 = "sha256-vozBK7g2dLxx9din/R2vU28Mm+LoGAO/BmQlt/ShmEo="; + }) + ]; + + postPatch = '' + substituteInPlace setup.py \ + --replace '"unittest2",' "" + ''; + + pythonImportsCheck = [ + "batchgenerators" + ]; - meta = { + meta = with lib; { description = "2D and 3D image data augmentation for deep learning"; homepage = "https://github.com/MIC-DKFZ/batchgenerators"; - license = lib.licenses.asl20; - maintainers = with lib.maintainers; [ bcdarwin ]; + license = licenses.asl20; + maintainers = with maintainers; [ bcdarwin ]; }; } |