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authorAlyssa Ross <hi@alyssa.is>2019-04-14 17:50:16 +0000
committerAlyssa Ross <hi@alyssa.is>2019-04-14 17:50:16 +0000
commit439ebf093f2779d73bc76484a36be2889cc807bf (patch)
tree7dd3b84fb345c228165c2dae6c7cdd54b433db9e /nixpkgs/pkgs/applications/science/biology/stacks
parentd7417c2c1096b13fe903af802c7cf019fca14a7b (diff)
parent0c0954781e257b8b0dc49341795a2fe7d96945a3 (diff)
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Merge commit '0c0954781e257b8b0dc49341795a2fe7d96945a3'
Diffstat (limited to 'nixpkgs/pkgs/applications/science/biology/stacks')
-rw-r--r--nixpkgs/pkgs/applications/science/biology/stacks/default.nix19
1 files changed, 19 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/stacks/default.nix b/nixpkgs/pkgs/applications/science/biology/stacks/default.nix
new file mode 100644
index 000000000000..01b1c0ba81bf
--- /dev/null
+++ b/nixpkgs/pkgs/applications/science/biology/stacks/default.nix
@@ -0,0 +1,19 @@
+{ stdenv, fetchurl, zlib }:
+    
+stdenv.mkDerivation rec {
+  pname = "stacks";
+  version = "2.3e";
+  src = fetchurl {
+    url = "http://catchenlab.life.illinois.edu/stacks/source/${pname}-${version}.tar.gz";
+    sha256 = "046gmq8nzqy5v70ydqrhib2aiyrlja3cljvd37w4qbd4ryj3jr0w";
+  };
+
+  buildInputs = [ zlib ];
+
+  meta = {
+    description = "Software pipeline for building loci from short-read sequences";
+    homepage = http://catchenlab.life.illinois.edu/stacks/;
+    maintainers = [ stdenv.lib.maintainers.bzizou ];
+    license = stdenv.lib.licenses.gpl3;
+  };
+}