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authorAlyssa Ross <hi@alyssa.is>2019-04-14 17:50:16 +0000
committerAlyssa Ross <hi@alyssa.is>2019-04-14 17:50:16 +0000
commit439ebf093f2779d73bc76484a36be2889cc807bf (patch)
tree7dd3b84fb345c228165c2dae6c7cdd54b433db9e /nixpkgs/pkgs/applications/science/biology/megahit
parentd7417c2c1096b13fe903af802c7cf019fca14a7b (diff)
parent0c0954781e257b8b0dc49341795a2fe7d96945a3 (diff)
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Merge commit '0c0954781e257b8b0dc49341795a2fe7d96945a3'
Diffstat (limited to 'nixpkgs/pkgs/applications/science/biology/megahit')
-rw-r--r--nixpkgs/pkgs/applications/science/biology/megahit/default.nix29
1 files changed, 29 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/megahit/default.nix b/nixpkgs/pkgs/applications/science/biology/megahit/default.nix
new file mode 100644
index 000000000000..56bb35b64df8
--- /dev/null
+++ b/nixpkgs/pkgs/applications/science/biology/megahit/default.nix
@@ -0,0 +1,29 @@
+{ stdenv, fetchFromGitHub, zlib }:
+
+stdenv.mkDerivation rec {
+  pname    = "megahit";
+  version = "1.1.4";
+
+  src = fetchFromGitHub {
+    owner = "voutcn";
+    repo = "megahit";
+    rev = "v${version}";
+    sha256 = "011k0776w76l03zmy70kfd3y9zjmdnspfbs9fcxmnl3bdwd36kcw";
+  };
+
+  buildInputs = [ zlib ];
+
+  installPhase = ''
+    for bin in megahit_sdbg_build megahit megahit_asm_core megahit_toolkit; do
+        install -vD $bin $out/bin/$bin
+    done
+  '';
+
+  meta = with stdenv.lib; {
+    description = "An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph";
+    license     = licenses.gpl3;
+    homepage    = https://github.com/voutcn/megahit;
+    maintainers = with maintainers; [ luispedro ];
+    platforms = [ "x86_64-linux" ];
+  };
+}