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| author | Alyssa Ross <hi@alyssa.is> | 2020-01-11 23:37:02 +0000 |
|---|---|---|
| committer | Alyssa Ross <hi@alyssa.is> | 2020-01-11 23:41:30 +0000 |
| commit | 6c557e3f1c28cf87e9fba232811d6875dd1399c1 (patch) | |
| tree | 035a071d5d8980df6de0fa42e2ef8fc0cce7055e /nixpkgs/pkgs/applications/science/biology/macse/default.nix | |
| parent | da7500bc026e937ac7fce7b50f67a0e1765737a7 (diff) | |
| parent | e4134747f5666bcab8680aff67fa3b63384f9a0f (diff) | |
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Merge commit 'e4134747f5666bcab8680aff67fa3b63384f9a0f'
Diffstat (limited to 'nixpkgs/pkgs/applications/science/biology/macse/default.nix')
| -rw-r--r-- | nixpkgs/pkgs/applications/science/biology/macse/default.nix | 32 |
1 files changed, 32 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/macse/default.nix b/nixpkgs/pkgs/applications/science/biology/macse/default.nix new file mode 100644 index 000000000000..59938addbe82 --- /dev/null +++ b/nixpkgs/pkgs/applications/science/biology/macse/default.nix @@ -0,0 +1,32 @@ +{ stdenv, fetchurl, jre, makeWrapper }: + +stdenv.mkDerivation rec { + pname = "macse"; + version = "2.03"; + + src = fetchurl { + url = "https://bioweb.supagro.inra.fr/${pname}/releases/${pname}_v${version}.jar"; + sha256 = "0jnjyz4f255glg37rawzdv4m6nfs7wfwc5dny7afvx4dz2sv4ssh"; + }; + + nativeBuildInputs = [ makeWrapper ]; + + dontBuild = true; + unpackPhase = ":"; + + installPhase = '' + runHook preInstall + mkdir -p $out/share/java + cp -s $src $out/share/java/macse.jar + makeWrapper ${jre}/bin/java $out/bin/macse --add-flags "-jar $out/share/java/macse.jar" + runHook postInstall + ''; + + meta = with stdenv.lib; { + description = "Multiple alignment of coding sequences"; + homepage = "https://bioweb.supagro.inra.fr/macse/"; + license = licenses.gpl2; + maintainers = [ maintainers.bzizou ]; + platforms = platforms.all; + }; +} |