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| author | Justin Bedo <cu@cua0.org> | 2019-12-18 15:55:20 +1100 |
|---|---|---|
| committer | Justin Bedo <cu@cua0.org> | 2019-12-20 11:27:02 +1100 |
| commit | 6741cff52769f7fe28a1cf1988dee8c9d76f4088 (patch) | |
| tree | fb3713cec02a16c4d253c9dc3d2633200a60c4d4 | |
| parent | 4b3112f8a4798470e5896670e6f7536eae01337e (diff) | |
| download | nixlib-6741cff52769f7fe28a1cf1988dee8c9d76f4088.tar nixlib-6741cff52769f7fe28a1cf1988dee8c9d76f4088.tar.gz nixlib-6741cff52769f7fe28a1cf1988dee8c9d76f4088.tar.bz2 nixlib-6741cff52769f7fe28a1cf1988dee8c9d76f4088.tar.lz nixlib-6741cff52769f7fe28a1cf1988dee8c9d76f4088.tar.xz nixlib-6741cff52769f7fe28a1cf1988dee8c9d76f4088.tar.zst nixlib-6741cff52769f7fe28a1cf1988dee8c9d76f4088.zip | |
last: init at 1042
| -rw-r--r-- | pkgs/applications/science/biology/last/default.nix | 30 | ||||
| -rw-r--r-- | pkgs/top-level/all-packages.nix | 2 |
2 files changed, 32 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/last/default.nix b/pkgs/applications/science/biology/last/default.nix new file mode 100644 index 000000000000..5ece9a463d43 --- /dev/null +++ b/pkgs/applications/science/biology/last/default.nix @@ -0,0 +1,30 @@ +{ stdenv, fetchurl, unzip, zlib, python3, parallel }: + +stdenv.mkDerivation rec { + pname = "last"; + version = "1042"; + + src = fetchurl { + url = "http://last.cbrc.jp/last-${version}.zip"; + sha256 = "0mgbhd01m9riqza2gx56qk6x5682kg71zflhisr6d3q05wrv103f"; + }; + + nativeBuildInputs = [ unzip ]; + buildInputs = [ zlib python3 ]; + + makeFlags = [ "prefix=${placeholder "out"}" ]; + + postFixup = '' + for f in $out/bin/parallel-* ; do + sed -i 's|parallel |${parallel}/bin/parallel |' $f + done + ''; + + meta = with stdenv.lib; { + description = "Genomic sequence aligner"; + homepage = "http://last.cbrc.jp/"; + license = licenses.gpl3; + maintainers = with maintainers; [ jbedo ]; + platforms = platforms.x86_64; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index e11f942c6fb3..d10c7ad1a763 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -23581,6 +23581,8 @@ in kssd = callPackage ../applications/science/biology/kssd { }; + last = callPackage ../applications/science/biology/last { }; + macse = callPackage ../applications/science/biology/macse { }; migrate = callPackage ../applications/science/biology/migrate { }; |