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{ lib
, buildPythonPackage
, fetchFromGitHub
, fetchpatch
, cython
, gfortran
, git
, meson-python
, pkg-config
, blas
, lapack
, numpy
, setuptools
, wheel
, pytestCheckHook
}:
buildPythonPackage rec {
pname = "scikit-misc";
version = "0.3.0";
pyproject = true;
src = fetchFromGitHub {
owner = "has2k1";
repo = "scikit-misc";
rev = "refs/tags/v${version}";
hash = "sha256-XV3s+y3JdMr1770S91ek6Y7MqvTg7/2cphLQldUPe5s=";
};
postPatch = ''
patchShebangs .
# unbound numpy and disable coverage testing in pytest
substituteInPlace pyproject.toml \
--replace 'numpy==' 'numpy>=' \
--replace 'addopts = "' '#addopts = "'
# provide a version to use when git fails to get the tag
[[ -f skmisc/_version.py ]] || \
echo '__version__ = "${version}"' > skmisc/_version.py
'';
nativeBuildInputs = [
cython
gfortran
git
meson-python
numpy
pkg-config
setuptools
wheel
];
propagatedBuildInputs = [
numpy
];
buildInputs = [
blas
lapack
];
mesonFlags = [
"-Dblas=${blas.pname}"
"-Dlapack=${lapack.pname}"
];
nativeCheckInputs = [
pytestCheckHook
];
# can not run tests from source directory
preCheck = ''
cd "$(mktemp -d)"
'';
pytestFlagsArray = [
"--pyargs skmisc"
];
pythonImportsCheck = [
"skmisc"
];
meta = with lib; {
description = "Miscellaneous tools for scientific computing";
homepage = "https://github.com/has2k1/scikit-misc";
license = licenses.bsd3;
maintainers = with maintainers; [ onny ];
};
}
|