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{ lib
, stdenv
, pythonOlder
, buildPythonPackage
, fetchFromGitHub
, setuptools-scm
, gmt
, numpy
, netcdf4
, pandas
, packaging
, xarray
, pytest-mpl
, ipython
, ghostscript
, pytestCheckHook
}:
buildPythonPackage rec {
pname = "pygmt";
version = "0.10.0";
format = "pyproject";
disabled = pythonOlder "3.9";
src = fetchFromGitHub {
owner = "GenericMappingTools";
repo = "pygmt";
rev = "refs/tags/v${version}";
hash = "sha256-+bkjqHjJIwk44u226q6xqeGmwMWleyc4lRfMZdDjVBA=";
};
postPatch = ''
substituteInPlace pygmt/clib/loading.py \
--replace "env.get(\"GMT_LIBRARY_PATH\", \"\")" "env.get(\"GMT_LIBRARY_PATH\", \"${gmt}/lib\")"
'';
nativeBuildInputs = [
setuptools-scm
];
propagatedBuildInputs = [
numpy
netcdf4
pandas
packaging
xarray
];
nativeCheckInputs = [
pytestCheckHook
pytest-mpl
ghostscript
ipython
];
# The *entire* test suite requires network access
doCheck = false;
postBuild = ''
export HOME=$TMP
'';
pythonImportsCheck = [
"pygmt"
];
meta = with lib; {
description = "A Python interface for the Generic Mapping Tools";
homepage = "https://github.com/GenericMappingTools/pygmt";
license = licenses.bsd3;
changelog = "https://github.com/GenericMappingTools/pygmt/releases/tag/v${version}";
# pygmt.exceptions.GMTCLibNotFoundError: Error loading the GMT shared library '/nix/store/r3xnnqgl89vrnq0kzxx0bmjwzks45mz8-gmt-6.1.1/lib/libgmt.dylib'
broken = stdenv.isDarwin;
maintainers = with maintainers; [ sikmir ];
};
}
|