diff options
Diffstat (limited to 'nixpkgs/pkgs/by-name/ja/jasp-desktop/modules.nix')
| -rw-r--r-- | nixpkgs/pkgs/by-name/ja/jasp-desktop/modules.nix | 134 |
1 files changed, 134 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/by-name/ja/jasp-desktop/modules.nix b/nixpkgs/pkgs/by-name/ja/jasp-desktop/modules.nix new file mode 100644 index 000000000000..1660daa764c1 --- /dev/null +++ b/nixpkgs/pkgs/by-name/ja/jasp-desktop/modules.nix @@ -0,0 +1,134 @@ +{ R +, rPackages +, fetchFromGitHub +, jasp-src +, jasp-version +}: + +with rPackages; +let + jaspColumnEncoder-src = fetchFromGitHub { + owner = "jasp-stats"; + repo = "jaspColumnEncoder"; + rev = "c54987bb25de8963866ae69ad3a6ae5a9a9f1240"; + hash = "sha256-aWfRG7DXO1MYFvmMLkX/xtHvGeIhFRcRDrVBrhkvYuI="; + }; + + jaspGraphs = buildRPackage { + name = "jaspGraphs-${jasp-version}"; + version = jasp-version; + + src = jasp-src; + sourceRoot = "${jasp-src.name}/Engine/jaspGraphs"; + + propagatedBuildInputs = [ ggplot2 gridExtra gtable lifecycle jsonlite R6 RColorBrewer rlang scales viridisLite ]; + }; + + jaspBase = buildRPackage { + name = "jaspBase-${jasp-version}"; + version = jasp-version; + + src = jasp-src; + sourceRoot = "${jasp-src.name}/Engine/jaspBase"; + + env.INCLUDE_DIR = "../inst/include/jaspColumnEncoder"; + + postPatch = '' + mkdir -p inst/include + cp -r --no-preserve=all ${jaspColumnEncoder-src} inst/include/jaspColumnEncoder + ''; + + propagatedBuildInputs = [ cli codetools ggplot2 gridExtra gridGraphics jaspGraphs jsonlite lifecycle modules officer pkgbuild plyr qgraph ragg R6 Rcpp renv remotes rjson rvg svglite systemfonts withr ]; + }; + + stanova = buildRPackage { + name = "stanova"; + src = fetchFromGitHub { + owner = "bayesstuff"; + repo = "stanova"; + rev = "988ad8e07cda1674b881570a85502be7795fbd4e"; + hash = "sha256-tAeHqTHao2KVRNFBDWmuF++H31aNN6O1ss1Io500QBY="; + }; + propagatedBuildInputs = [ emmeans lme4 coda rstan MASS ]; + }; + + bstats = buildRPackage { + name = "bstats"; + src = fetchFromGitHub { + owner = "AlexanderLyNL"; + repo = "bstats"; + rev = "42d34c18df08d233825bae34fdc0dfa0cd70ce8c"; + hash = "sha256-N2KmbTPbyvzsZTWBRE2x7bteccnzokUWDOB4mOWUdJk="; + }; + propagatedBuildInputs = [ hypergeo purrr SuppDists ]; + }; + + flexplot = buildRPackage { + name = "flexplot"; + src = fetchFromGitHub { + owner = "dustinfife"; + repo = "flexplot"; + rev = "4223ad5fb56028018b964d6f9f5aa5bac8710821"; + hash = "sha256-L+Ed2bIWjq3ZIAGookp8dAjDSeldEbcwynwFVVZ9IcU="; + }; + propagatedBuildInputs = [ cowplot MASS tibble withr dplyr magrittr forcats purrr plyr R6 ggplot2 patchwork ggsci lme4 party mgcv rlang ]; + }; + + # conting has been removed from CRAN + conting' = buildRPackage { + name = "conting"; + src = fetchFromGitHub { + owner = "vandenman"; + repo = "conting"; + rev = "03a4eb9a687e015d602022a01d4e638324c110c8"; + hash = "sha256-Sp09YZz1WGyefn31Zy1qGufoKjtuEEZHO+wJvoLArf0="; + }; + propagatedBuildInputs = [ mvtnorm gtools tseries coda ]; + }; + + buildJaspModule = name: deps: buildRPackage { + name = "${name}-${jasp-version}"; + version = jasp-version; + src = jasp-src; + sourceRoot = "${jasp-src.name}/Modules/${name}"; + propagatedBuildInputs = deps; + }; +in +{ + engine = { inherit jaspBase jaspGraphs; }; + modules = rec { + jaspAcceptanceSampling = buildJaspModule "jaspAcceptanceSampling" [ abtest BayesFactor conting' ggplot2 jaspBase jaspGraphs plyr stringr vcd vcdExtra AcceptanceSampling ]; + jaspAnova = buildJaspModule "jaspAnova" [ afex BayesFactor boot car colorspace emmeans ggplot2 jaspBase jaspDescriptives jaspGraphs jaspTTests KernSmooth matrixStats multcomp onewaytests plyr stringi stringr restriktor ]; + jaspAudit = buildJaspModule "jaspAudit" [ bstats extraDistr ggplot2 ggrepel jaspBase jaspGraphs jfa ]; + jaspBain = buildJaspModule "jaspBain" [ bain lavaan ggplot2 semPlot stringr jaspBase jaspGraphs jaspSem ]; + jaspBsts = buildJaspModule "jaspBsts" [ Boom bsts ggplot2 jaspBase jaspGraphs matrixStats reshape2 ]; + jaspCircular = buildJaspModule "jaspCircular" [ jaspBase jaspGraphs circular ggplot2 ]; + jaspCochrane = buildJaspModule "jaspCochrane" [ jaspBase jaspGraphs jaspDescriptives jaspMetaAnalysis ]; + jaspDescriptives = buildJaspModule "jaspDescriptives" [ ggplot2 ggrepel jaspBase jaspGraphs ]; + jaspDistributions = buildJaspModule "jaspDistributions" [ car fitdistrplus ggplot2 goftest gnorm jaspBase jaspGraphs MASS sgt sn ]; + jaspEquivalenceTTests = buildJaspModule "jaspEquivalenceTTests" [ BayesFactor ggplot2 jaspBase jaspGraphs metaBMA TOSTER jaspTTests ]; + jaspFactor = buildJaspModule "jaspFactor" [ ggplot2 jaspBase jaspGraphs jaspSem lavaan psych qgraph reshape2 semPlot GPArotation Rcsdp semTools ]; + jaspFrequencies = buildJaspModule "jaspFrequencies" [ abtest BayesFactor conting' multibridge ggplot2 jaspBase jaspGraphs plyr stringr vcd vcdExtra ]; + jaspJags = buildJaspModule "jaspJags" [ coda ggplot2 ggtext hexbin jaspBase jaspGraphs rjags scales stringr ]; + jaspLearnBayes = buildJaspModule "jaspLearnBayes" [ extraDistr ggplot2 HDInterval jaspBase jaspGraphs MASS MCMCpack MGLM scales ggalluvial ragg runjags ggdist png posterior ]; + jaspLearnStats = buildJaspModule "jaspLearnStats" [ extraDistr ggplot2 jaspBase jaspGraphs jaspDistributions jaspDescriptives jaspTTests ggforce tidyr igraph ]; + jaspMachineLearning = buildJaspModule "jaspMachineLearning" [ kknn AUC cluster colorspace DALEX dbscan e1071 fpc gbm Gmedian ggparty ggdendro ggnetwork ggplot2 ggrepel ggridges glmnet jaspBase jaspGraphs MASS mvnormalTest neuralnet network partykit plyr randomForest rpart ROCR Rtsne signal ]; + jaspMetaAnalysis = buildJaspModule "jaspMetaAnalysis" [ dplyr ggplot2 jaspBase jaspGraphs MASS metaBMA metafor psych purrr rstan stringr tibble tidyr weightr BayesTools RoBMA metamisc ggmcmc pema ]; + jaspMixedModels = buildJaspModule "jaspMixedModels" [ afex emmeans ggplot2 ggpol jaspBase jaspGraphs lme4 loo mgcv rstan rstanarm stanova withr ]; + jaspNetwork = buildJaspModule "jaspNetwork" [ bootnet BDgraph corpcor dplyr foreach ggplot2 gtools HDInterval huge IsingSampler jaspBase jaspGraphs mvtnorm qgraph reshape2 snow stringr ]; + jaspPower = buildJaspModule "jaspPower" [ pwr jaspBase jaspGraphs ]; + jaspPredictiveAnalytics = buildJaspModule "jaspPredictiveAnalytics" [ jaspBase jaspGraphs bsts bssm precrec reshape2 Boom lubridate prophet BART EBMAforecast imputeTS ]; + jaspProcess = buildJaspModule "jaspProcess" [ dagitty ggplot2 ggraph jaspBase jaspGraphs ]; + jaspProphet = buildJaspModule "jaspProphet" [ rstan ggplot2 jaspBase jaspGraphs prophet scales ]; + jaspQualityControl = buildJaspModule "jaspQualityControl" [ car cowplot daewr desirability DoE_base EnvStats FAdist fitdistrplus FrF2 ggplot2 ggrepel goftest ggpp irr jaspBase jaspDescriptives jaspGraphs mle_tools psych qcc rsm Rspc tidyr tibble vipor weibullness ]; + jaspRegression = buildJaspModule "jaspRegression" [ BAS boot bstats combinat emmeans ggplot2 ggrepel hmeasure jaspAnova jaspBase jaspDescriptives jaspGraphs jaspTTests lmtest logistf MASS matrixStats mdscore ppcor purrr Rcpp statmod VGAM ]; + jaspReliability = buildJaspModule "jaspReliability" [ Bayesrel coda ggplot2 ggridges irr jaspBase jaspGraphs LaplacesDemon lme4 MASS psych ]; + jaspRobustTTests = buildJaspModule "jaspRobustTTests" [ RoBTT ggplot2 jaspBase jaspGraphs ]; + jaspSem = buildJaspModule "jaspSem" [ forcats ggplot2 jaspBase jaspGraphs lavaan cSEM reshape2 semPlot semTools stringr tibble tidyr ]; + jaspSummaryStatistics = buildJaspModule "jaspSummaryStatistics" [ BayesFactor bstats jaspBase jaspFrequencies jaspGraphs jaspRegression jaspTTests jaspAnova jaspDescriptives SuppDists bayesplay ]; + jaspSurvival = buildJaspModule "jaspSurvival" [ survival survminer jaspBase jaspGraphs ]; + jaspTTests = buildJaspModule "jaspTTests" [ BayesFactor car ggplot2 jaspBase jaspGraphs logspline plotrix plyr ]; + jaspTimeSeries = buildJaspModule "jaspTimeSeries" [ jaspBase jaspGraphs forecast ]; + jaspVisualModeling = buildJaspModule "jaspVisualModeling" [ flexplot jaspBase jaspGraphs ]; + }; +} |