blob: 200d00395e2a61d84882b49f4268acadf15d63c9 (
plain) (
blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
|
{ stdenv, fetchurl, makeDesktopItem, python3Packages, glew, freeglut, libpng, libxml2, tk, freetype }:
let
pname = "pymol";
ver_maj = "1.8";
ver_min = "4";
version = "${ver_maj}.${ver_min}.0";
description = "A Python-enhanced molecular graphics tool";
desktopItem = makeDesktopItem {
name = "${pname}";
exec = "${pname}";
desktopName = "PyMol Molecular Graphics System";
genericName = "Molecular Modeller";
comment = description;
mimeType = "chemical/x-pdb;chemical/x-mdl-molfile;chemical/x-mol2;chemical/seq-aa-fasta;chemical/seq-na-fasta;chemical/x-xyz;chemical/x-mdl-sdf;";
categories = "Graphics;Education;Science;Chemistry;";
};
in
python3Packages.buildPythonApplication {
name = "pymol-${version}";
src = fetchurl {
url = "mirror://sourceforge/project/pymol/pymol/${ver_maj}/pymol-v${version}.tar.bz2";
sha256 = "0yfj8g5yic9zz6f0bw2n8h6ifvgsn8qvhq84alixsi28wzppn55n";
};
buildInputs = [ python3Packages.numpy glew freeglut libpng libxml2 tk freetype ];
NIX_CFLAGS_COMPILE = "-I ${libxml2.dev}/include/libxml2";
installPhase = ''
python setup.py install --home=$out
cp -r ${desktopItem}/share/ $out/
runHook postInstall
'';
postInstall = ''
wrapProgram $out/bin/pymol \
--prefix PYTHONPATH : ${python3Packages.Pmw}/lib/python3.6/site-packages \
--prefix PYTHONPATH : ${python3Packages.tkinter}/lib/python3.6/site-packages
'';
meta = with stdenv.lib; {
description = description;
homepage = "https://www.pymol.org/";
license = licenses.psfl;
};
}
|