From 1ba3f3f00fc24ffaa2b9f075d66f738831f7a392 Mon Sep 17 00:00:00 2001
From: Bruno Bzeznik <Bruno.Bzeznik@imag.fr>
Date: Thu, 3 Oct 2019 11:18:48 +0200
Subject: SPAdes: init at 3.13.1 (#63082)

---
 .../science/biology/spades/default.nix             | 27 ++++++++++++++++++++++
 1 file changed, 27 insertions(+)
 create mode 100644 pkgs/applications/science/biology/spades/default.nix

(limited to 'pkgs/applications/science')

diff --git a/pkgs/applications/science/biology/spades/default.nix b/pkgs/applications/science/biology/spades/default.nix
new file mode 100644
index 000000000000..a195f79010a7
--- /dev/null
+++ b/pkgs/applications/science/biology/spades/default.nix
@@ -0,0 +1,27 @@
+{ stdenv, fetchurl, zlib, bzip2, cmake }:
+
+stdenv.mkDerivation rec {
+  pname = "SPAdes";
+  version = "3.13.1";
+
+  src = fetchurl {
+    url = "http://cab.spbu.ru/files/release${version}/${pname}-${version}.tar.gz";
+    sha256 = "0giayz197lmq2108filkn9izma3i803sb3iskv9hs5snzdr9p8ld";
+  };
+
+  nativeBuildInputs = [ cmake ];
+
+  buildInputs = [ zlib bzip2 ];
+
+  doCheck = true;
+
+  sourceRoot = "${pname}-${version}/src";
+
+  meta = with stdenv.lib; {
+    description = "St. Petersburg genome assembler: assembly toolkit containing various assembly pipelines";
+    license = licenses.gpl2;
+    homepage = "http://cab.spbu.ru/software/spades/";
+    platforms = platforms.unix;
+    maintainers = [ maintainers.bzizou ];
+  };
+}
-- 
cgit 1.4.1