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* | | | | | | | Merge pull request #292044 from r-ryantm/auto-update/mavproxyWeijia Wang2024-03-07
|\ \ \ \ \ \ \ \ | |_|_|_|/ / / / |/| | | | | | | mavproxy: 1.8.66 -> 1.8.70
| * | | | | | | mavproxy: 1.8.66 -> 1.8.70R. Ryantm2024-02-28
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* | | | | | | Merge pull request #289177 from r-ryantm/auto-update/clingconWeijia Wang2024-03-06
|\ \ \ \ \ \ \ | | | | | | | | | | | | | | | | clingcon: 5.2.0 -> 5.2.1
| * | | | | | | clingcon: 5.2.0 -> 5.2.1R. Ryantm2024-02-16
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* | | | | | | | Merge pull request #290917 from r-ryantm/auto-update/magic-vlsiWeijia Wang2024-03-06
|\ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | magic-vlsi: 8.3.460 -> 8.3.463
| * | | | | | | | magic-vlsi: 8.3.460 -> 8.3.463R. Ryantm2024-03-05
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* | | | | | | | | cadical: 1.9.4 -> 1.9.5R. Ryantm2024-03-06
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* | | | | | | | | gromacs: 2024 -> 2024.1Markus Kowalewski2024-03-05
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* | | | | | | | lean4: 4.6.0 -> 4.6.1Mario Rodas2024-03-04
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Diff: https://github.com/leanprover/lean4/compare/v4.6.0...v4.6.1 Changelog: https://github.com/leanprover/lean4/blob/v4.6.1/RELEASES.md
* | | | | | | | lammps-mpi: 2Aug2023_update2 -> 2Aug2023_update3R. Ryantm2024-03-02
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* | | | | | | | Merge pull request #292584 from r-ryantm/auto-update/wxmaximaDoron Behar2024-03-02
|\ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | wxmaxima: 24.02.1 -> 24.02.2
| * | | | | | | | wxmaxima: 24.02.1 -> 24.02.2R. Ryantm2024-03-01
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* | | | | | | | Merge pull request #287403 from trofi/graphia-gcc-13-fix-updateMario Rodas2024-03-01
|\ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | graphia: 3.2 -> 4.2
| * | | | | | | | graphia: 3.2 -> 4.2Sergei Trofimovich2024-02-08
| | |_|_|_|_|/ / | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | The main change is the build fis against `gcc-13` https://hydra.nixos.org/build/247540136: /build/source/source/thirdparty/breakpad/src/client/linux/handler/minidump_descriptor.h:115:3: error: 'uintptr_t' does not name a type 115 | uintptr_t address_within_principal_mapping() const { | ^~~~~~~~~ Changes: - https://github.com/graphia-app/graphia/releases/tag/4.0 - https://github.com/graphia-app/graphia/releases/tag/4.1 - https://github.com/graphia-app/graphia/releases/tag/4.2
* | | | | | | | nnpdf: 4.0.8 -> 4.0.9R. Ryantm2024-03-01
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* | | | | | | Merge pull request #292202 from marsam/update-lean4Mario Rodas2024-02-29
|\ \ \ \ \ \ \ | | | | | | | | | | | | | | | | lean4: 4.5.0 -> 4.6.0
| * | | | | | | lean4: 4.5.0 -> 4.6.0Mario Rodas2024-02-28
| | |_|_|_|_|/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Diff: https://github.com/leanprover/lean4/compare/v4.5.0...v4.6.0 Changelog: https://github.com/leanprover/lean4/blob/v4.6.0/RELEASES.md
* | | | | | | Merge pull request #289911 from r-ryantm/auto-update/lastJustin Bedő2024-03-01
|\ \ \ \ \ \ \ | |/ / / / / / |/| | | | | | last: 1541 -> 1542
| * | | | | | last: 1541 -> 1542R. Ryantm2024-02-19
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* | | | | | | eigenmath: unstable-2024-02-04 -> unstable-2024-02-25R. Ryantm2024-02-28
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* | | | | | Merge pull request #291307 from trofi/sortmerna-gcc-13-fixNick Cao2024-02-25
|\ \ \ \ \ \ | | | | | | | | | | | | | | sortmerna: fix `gcc-13` build
| * | | | | | sortmerna: fix `gcc-13` buildSergei Trofimovich2024-02-25
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Without the change the build on `master` fails as https://hydra.nixos.org/build/249070958: In file included from /build/source/src/sortmerna/kseq_load.cpp:38: /build/source/include/kseq_load.hpp:61:12: error: 'uint64_t' has not been declared 61 | uint64_t number_total_read, | ^~~~~~~~
* | | | | | | starspace: mark brokenSergei Trofimovich2024-02-24
|/ / / / / / | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | THe build fails against `zlib-1.3` in `master` as https://hydra.nixos.org/build/249158742: 3rdparty/zlib.h:1468:32: error: expected initializer before 'Z_ARG' 1468 | ZEXTERN int ZEXPORTVA gzprintf Z_ARG((gzFile file, const char *format, ...)); | ^~~~~ The upstream repository did not see updates for past 5 years and is archived. Let's schedule it for removal.
* | | | | | Merge remote-tracking branch 'origin/master' into staging-nextFabián Heredia Montiel2024-02-23
|\ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | fastcdr was moved to by-name Related to: - https://github.com/NixOS/nixpkgs/pull/290836
| * \ \ \ \ \ Merge pull request #290850 from raboof/gnucap-by-namePol Dellaiera2024-02-23
| |\ \ \ \ \ \ | | | | | | | | | | | | | | | | gnucap: move to by-name
| | * | | | | | gnucap: move to by-nameArnout Engelen2024-02-23
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | tested gnucap-full still works as well
* | | | | | | | Merge master into staging-nextgithub-actions[bot]2024-02-23
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| * | | | | | | snakemake: 8.4.8 -> 8.4.12R. Ryantm2024-02-23
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* | | | | | | | Merge master into staging-nextgithub-actions[bot]2024-02-23
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| * | | | | | | Merge pull request #290735 from marsam/update-elanMario Rodas2024-02-23
| |\ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | elan: 3.1.0 -> 3.1.1
| | * | | | | | | elan: 3.1.0 -> 3.1.1Mario Rodas2024-02-22
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Diff: https://github.com/leanprover/elan/compare/v3.1.0...v3.1.1 Changelog: https://github.com/leanprover/elan/blob/v3.1.1/CHANGELOG.md
* | | | | | | | | Merge pull request #290693 from simonhollingshead/boolector-3.2.3-plus-cpp14Luke Granger-Brown2024-02-23
|\ \ \ \ \ \ \ \ \ | |/ / / / / / / / |/| | | | | | | | boolector: 3.2.2 -> 3.2.3 + upstream patch for C++14 compatibility.
| * | | | | | | | boolector: 3.2.2 -> 3.2.3 + upstream patch for C++14 compatibility.Simon Hollingshead2024-02-22
| |/ / / / / / / | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | https://github.com/Boolector/boolector/compare/3.2.2...3.2.3 https://github.com/Boolector/boolector/commit/cc13f371c0c5093d98638ddd213dc835ef3aadf3
* | | | | | | | Merge pull request #290162 from trofi/octopus-caller-gcc-13-fixJustin Bedő2024-02-23
|\ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | octopus-caller: fix `gcc-13` build failure (drop `-Werror`)
| * | | | | | | | octopus-caller: fix `gcc-13` build failure (drop `-Werror`)Sergei Trofimovich2024-02-20
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Without the change the build on `master` fails as https://hydra.nixos.org/build/249090788: /build/source/src/config/option_collation.cpp: In function 'auto octopus::options::make_variant_generator_builder(const OptionMap&, boost::optional<const octopus::ReadSetProfile&>)': /build/source/src/config/option_collation.cpp:1298: error: redundant move in initialization [-Werror=redundant-move] 1298 | throw ConflictingSourceVariantFile {std::move(source_path), *output_path}; | Blanket `-Werror` frequently causes build failures unless upstream is quick at addressing build failures.
* | | | | | | | | Merge pull request #290665 from markuskowa/fix-gromacsmarkuskowa2024-02-22
|\ \ \ \ \ \ \ \ \ | |_|/ / / / / / / |/| | | | | | | | gromacs: fix CUDA build
| * | | | | | | | gromacs: require single precssion when building with CUDAMarkus Kowalewski2024-02-22
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| * | | | | | | | gromacs: fix CUDA buildMarkus Kowalewski2024-02-22
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* | | | | | | | | Merge pull request #290040 from r-ryantm/auto-update/primesieveMauricio Collares2024-02-22
|\ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | primesieve: 11.2 -> 12.0
| * | | | | | | | | primesieve: 11.2 -> 12.0R. Ryantm2024-02-19
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* | | | | | | | | Merge pull request #290454 from fabaff/strictdoc-fixFabian Affolter2024-02-22
|\ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | strictdoc: refactor
| * | | | | | | | | strictdoc: refactorFabian Affolter2024-02-21
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* | | | | | | | | Merge pull request #290031 from voidIess/masterNikolay Korotkiy2024-02-22
|\ \ \ \ \ \ \ \ \ | |/ / / / / / / / |/| | | | | | | | geogebra: linked icon to archive.org
| * | | | | | | | geogebra: linked icon to archive.orgJulius Schmitt2024-02-19
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* | | | | | | | Merge pull request #256087 from raboof/gnucap-updateArnout Engelen2024-02-20
|\ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | gnucap: update to 20240130-dev and add gnucap-modelgen-verilog
| * | | | | | | | gnucap-modelgen-verilog: init at 20240130-devArnout Engelen2024-01-31
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Introducing 'withPlugins' infrastructure to gnucap
| * | | | | | | | gnucap: 20210107 -> 20240130-devArnout Engelen2024-01-31
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | The last full release is so old the upgrade to a development release seems reasonable: there may be new bugs, but also old bugs have been fixed. It doesn't seem worth it to support both side-by-side at this point.
* | | | | | | | | Merge pull request #288514 from sheepforce/avogadro2markuskowa2024-02-20
|\ \ \ \ \ \ \ \ \ | |_|_|/ / / / / / |/| | | | | | | | avogadro2: 1.98.1 -> 1.99.0
| * | | | | | | | avogadro2: 1.98.1 -> 1.99.0Phillip Seeber2024-02-14
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* | | | | | | | | openmolcas: 23.10 -> 24.02Phillip Seeber2024-02-20
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