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* Merge pull request #41178 from ryantm/simgridSarah Brofeldt2018-05-28
|\ | | | | simgrid: 3.17 -> 3.19.1
| * simgrid: 3.17 -> 3.19.1Ryan Mulligan2018-05-28
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* | celf: init at 2013-07-25 (#41141)Ben Darwin2018-05-28
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* | treewide: fix derivation namesRyan Mulligan2018-05-28
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* Merge staging into masterFrederik Rietdijk2018-05-27
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| * Merge branch 'master' into stagingJan Malakhovski2018-05-26
| |\ | | | | | | | | | | | | | | | Fixed conflicts: - lib/systems/for-meta.nix: in favor of staging - pkgs/os-specific/darwin/xcode/default.nix: in favor of master
| * \ Merge pull request #41009 from matthewbauer/normalize-namesMatthew Justin Bauer2018-05-25
| |\ \ | | | | | | | | Add versions to packages missing it
| | * | simgrid: cleanupYegor Timoshenko2018-05-25
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| | * | treewide: add version to packagesMatthew Bauer2018-05-25
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Lots of packages are missing versions in their name. This adds them where appropriate. These were found with this command: $ nix-env -qa -f. | grep -v '\-[0-9A-Za-z.-_+]*$' | grep -v '^hook$' See issue #41007.
* | | | picard-tools: 2.18.4 -> 2.18.5R. RyanTM2018-05-26
| |_|/ |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/picard-tools/versions. These checks were done: - built on NixOS - Warning: no invocation of /nix/store/y7q0bsph0zldfjkz4ci3f41ba5va810w-picard-tools-2.18.5/bin/picard had a zero exit code or showed the expected version - 0 of 1 passed binary check by having a zero exit code. - 0 of 1 passed binary check by having the new version present in output. - found 2.18.5 with grep in /nix/store/y7q0bsph0zldfjkz4ci3f41ba5va810w-picard-tools-2.18.5 - directory tree listing: https://gist.github.com/1938ad634fa882d94e8d28fd1625547c - du listing: https://gist.github.com/4b51e89646327900f6ef6f2242f5d0bd
* | | python.pkgs.spyder: fix setup.py patchJörg Thalheim2018-05-25
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* | | qalculate-gtk: 2.3.0 -> 2.5.0Gabriel Ebner2018-05-24
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* | gmsh: gfortran -> nativeBuildInputs (fix #40976) (#40984)Sarah Brofeldt2018-05-23
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* | form: init at 4.2.0 (#40693)Dmitry Kalinkin2018-05-22
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* | proverif: 1.97pl1 -> 2.00Vincent Laporte2018-05-22
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* pari: 2.9.4 -> 2.9.5R. RyanTM2018-05-21
| | | | | | | | | | | | | | | | | | | Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/pari/versions. These checks were done: - built on NixOS - /nix/store/18hjz56shfnp00r1pgslfy3zci2wk6m9-pari-2.9.5/bin/gp passed the binary check. - /nix/store/18hjz56shfnp00r1pgslfy3zci2wk6m9-pari-2.9.5/bin/tex2mail passed the binary check. - /nix/store/18hjz56shfnp00r1pgslfy3zci2wk6m9-pari-2.9.5/bin/gphelp passed the binary check. - /nix/store/18hjz56shfnp00r1pgslfy3zci2wk6m9-pari-2.9.5/bin/gp-2.9 passed the binary check. - 4 of 4 passed binary check by having a zero exit code. - 0 of 4 passed binary check by having the new version present in output. - found 2.9.5 with grep in /nix/store/18hjz56shfnp00r1pgslfy3zci2wk6m9-pari-2.9.5 - directory tree listing: https://gist.github.com/63c5da24ace1d863b434a462fc0d0123 - du listing: https://gist.github.com/d275cd2f3b274f52576dbab1bf9ebc9c
* gtkwave: 3.3.89 -> 3.3.90R. RyanTM2018-05-18
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/gtkwave/versions. These checks were done: - built on NixOS - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/evcd2vcd passed the binary check. - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/fst2vcd passed the binary check. - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/vcd2fst passed the binary check. - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/fstminer passed the binary check. - Warning: no invocation of /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/ghwdump had a zero exit code or showed the expected version - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/lxt2miner passed the binary check. - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/lxt2vcd passed the binary check. - Warning: no invocation of /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/shmidcat had a zero exit code or showed the expected version - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/vcd2lxt passed the binary check. - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/vcd2lxt2 passed the binary check. - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/vcd2vzt passed the binary check. - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/vzt2vcd passed the binary check. - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/vztminer passed the binary check. - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/gtkwave passed the binary check. - Warning: no invocation of /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/twinwave had a zero exit code or showed the expected version - Warning: no invocation of /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/rtlbrowse had a zero exit code or showed the expected version - /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90/bin/vermin passed the binary check. - 13 of 17 passed binary check by having a zero exit code. - 0 of 17 passed binary check by having the new version present in output. - found 3.3.90 with grep in /nix/store/hhpifj7x2j4nr80kiksdhqyfny1hlyvh-gtkwave-3.3.90 - directory tree listing: https://gist.github.com/cf30f5f6dd398a3083156aed84f02f36 - du listing: https://gist.github.com/6d77f0a1fdfe06cfe325c3873fdfd97c
* Merge pull request #40614 from symphorien/riesPascal Wittmann2018-05-17
|\ | | | | ries: init at 2018-04-11
| * ries: init at 2018-04-11Symphorien Gibol2018-05-17
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* | nauty: 26r7 -> 26r10R. RyanTM2018-05-17
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/nauty/versions. These checks were done: - built on NixOS - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/dreadnaut passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/copyg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/listg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/labelg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/dretog passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/amtog passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/geng passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/complg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/showg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/NRswitchg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/biplabg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/addedgeg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/deledgeg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/countg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/pickg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/genrang passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/newedgeg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/catg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/genbg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/directg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/gentreeg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/genquarticg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/ranlabg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/multig passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/planarg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/gentourng passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/linegraphg passed the binary check. - Warning: no invocation of /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/watercluster2 had a zero exit code or showed the expected version - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/dretodot passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/subdivideg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/vcolg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/delptg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/cubhamg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/twohamg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/hamheuristic passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/converseg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/genspecialg passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/genbgL passed the binary check. - /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/shortg passed the binary check. - Warning: no invocation of /nix/store/f2icw60ljw5s4nkj8hlgwxz83szfi1m7-nauty-26r10/bin/configure had a zero exit code or showed the expected version - 38 of 40 passed binary check by having a zero exit code. - 0 of 40 passed binary check by having the new version present in output. - directory tree listing: https://gist.github.com/3bca602211d416ba58097f4f8880b6d0 - du listing: https://gist.github.com/4ac19efe14e18aae8fece0ec1a500bf1
* | pspp: provide default icons & settingsMatthew Bauer2018-05-15
| | | | | | | | | | | | | | | | | | | | | | | | | | psppire needs to be wrapped so that it will work outside of GNOME desktop. We provide hicolor-icon-theme & gsettings-desktop-schemas. Note that at runtime, I still get this error: - Cannot create a converter for `IBM864' to `UTF-8': Invalid argument Possibly a locale issue. Fixes #40558
* | star: 2.5.3a -> 2.6.0c (#40518)Arcadio Rubio García2018-05-15
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* | minimap2: init at 2.10Arcadio Rubio García2018-05-14
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* | giac: re-add lapack without atlas (#40 (#40458)Timo Kaufmann2018-05-14
| | | | | | giac: re-add lapack without atlas
* | elan: 0.3.2 -> 0.5.0Gabriel Ebner2018-05-14
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* | giac: remove liblapackWithAtlas dependency (#40430)Timo Kaufmann2018-05-13
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* | sasview: fix build (#40433)Maximilian Bosch2018-05-13
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | The package breaks currently breaks with the following message: ``` fixed-output derivation produced path '/nix/store/5dh1mdj027ad8sprk12fqa5h5bpdxs5n-sasview' with sha256 hash '12k1w4yq1mzjxcp2cqb562c7cbwzhi54rsbmgi0fax0i1660q167' instead of the expected hash '05la54wwzzlkhmj8vkr0bvzagyib6z6mgwqbddzjs5y1wd48vpcx' ``` To fix the build the following changes were applied: * Switched to latest master for now as the older releases have a broken `py.test` configuration and altering hashes. * Added `checkPhase` which invokes `py.test` directly and drops duplicated files from `dist/tmpbuild`. * Rebased the patches `pyparsing-fix.patch` and `local_config.patch` for the latest master revision. Additionally refer to the discussion in #40381 for further reference.
* | picard-tools: 2.18.3 -> 2.18.4R. RyanTM2018-05-12
| | | | | | | | | | | | | | | | | | | | | | | | | | Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/picard-tools/versions. These checks were done: - built on NixOS - Warning: no binary found that responded to help or version flags. (This warning appears even if the package isn't expected to have binaries.) - found 2.18.4 with grep in /nix/store/k62ym9i08d0w9sgmdjjfyy4lf2n9ig7p-picard-tools-2.18.4 - directory tree listing: https://gist.github.com/4d9e3062e701681d9b53033dc9511663
* | yacas: 1.2.2 -> 1.6.1John Ericson2018-05-10
| | | | | | | | | | They switched to cmake and talk about mingw cross, so I can kill crossAttrs too.
* | tamarin-prover: 1.3.1 -> 1.4.0Austin Seipp2018-05-07
| | | | | | | | Signed-off-by: Austin Seipp <aseipp@pobox.com>
* | Merge pull request #40113 from wchresta/tamarin/fixJörg Thalheim2018-05-07
|\ \ | | | | | | tamarin-prover: Fix compile issues
| * | tamarin-prover: Fix compile issuesWanja Chresta2018-05-07
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* | | Merge pull request #40093 from r-ryantm/auto-update/leanGabriel Ebner2018-05-07
|\ \ \ | |/ / |/| | lean: 3.3.0 -> 3.4.1
| * | lean: 3.3.0 -> 3.4.1R. RyanTM2018-05-07
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/lean/versions. These checks were done: - built on NixOS - ran ‘/nix/store/kdbjdracd2m6fv18k9kc5bcmr0p60glx-lean-3.4.1/bin/lean -h’ got 0 exit code - ran ‘/nix/store/kdbjdracd2m6fv18k9kc5bcmr0p60glx-lean-3.4.1/bin/lean --help’ got 0 exit code - ran ‘/nix/store/kdbjdracd2m6fv18k9kc5bcmr0p60glx-lean-3.4.1/bin/leanpkg help’ got 0 exit code - found 3.4.1 with grep in /nix/store/kdbjdracd2m6fv18k9kc5bcmr0p60glx-lean-3.4.1 - directory tree listing: https://gist.github.com/198504c00746718749b3019653fe78fd
* | | Merge pull request #39972 from ikervagyok/mathematicaMatthew Justin Bauer2018-05-05
|\ \ \ | | | | | | | | mathematica: add mesa, fix `libGL.so.1 not found` messages
| * | | mathematica: add mesa, fix `libGL.so.1 not found` messagesLengyel Balazs2018-05-04
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* | | | Merge pull request #39740 from r-ryantm/auto-update/picard-toolsMatthew Justin Bauer2018-05-04
|\ \ \ \ | |/ / / |/| | | picard-tools: 2.18.2 -> 2.18.3
| * | | picard-tools: 2.18.2 -> 2.18.3R. RyanTM2018-04-30
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/picard-tools/versions. These checks were done: - built on NixOS - Warning: no binary found that responded to help or version flags. (This warning appears even if the package isn't expected to have binaries.) - found 2.18.3 with grep in /nix/store/q67hqz7716nf3c4f8rjmlpf2dqbb06rz-picard-tools-2.18.3 - directory tree listing: https://gist.github.com/6b71ce718f18ef6a48c05457cd0e583b
* | | | symbiyosys: 2018.03.21 -> 2018.05.03Austin Seipp2018-05-03
| |/ / |/| | | | | | | | Signed-off-by: Austin Seipp <aseipp@pobox.com>
* | | Merge pull request #39907 from matthewbauer/workMatthew Justin Bauer2018-05-03
|\ \ \ | | | | | | | | Miscellaneous cleanups
| * | | treewide: remove platform assertionsMatthew Bauer2018-05-03
| | | | | | | | | | | | | | | | linux: readd assertion
* | | | paml: 4.9g -> 4.9hR. RyanTM2018-05-03
|/ / / | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools. This update was made based on information from https://repology.org/metapackage/paml/versions. These checks were done: - built on NixOS - ran ‘/nix/store/39cfy96430yznv6h3cg7zd8850i6kdl1-paml-4.9h/bin/chi2 -h’ got 0 exit code - ran ‘/nix/store/39cfy96430yznv6h3cg7zd8850i6kdl1-paml-4.9h/bin/chi2 --help’ got 0 exit code - ran ‘/nix/store/39cfy96430yznv6h3cg7zd8850i6kdl1-paml-4.9h/bin/chi2 help’ got 0 exit code - found 4.9h with grep in /nix/store/39cfy96430yznv6h3cg7zd8850i6kdl1-paml-4.9h - directory tree listing: https://gist.github.com/b2a37e7cd2b4b41178f0698f3aac69e2
* | | Merge pull request #39790 from matthewbauer/gnu-on-darwinMatthew Justin Bauer2018-05-01
|\ \ \ | | | | | | | | GNUs on Darwin
| * | | pspp: supports darwinMatthew Bauer2018-05-01
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* | | | Merge pull request #37855 from Mounium/chem3Matthew Justin Bauer2018-05-01
|\ \ \ \ | | | | | | | | | | jmol init, pymol -> 2.1.0 and tidied up all-packages.nix
| * | | | jmol: made it runnableKatona László2018-04-25
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| * | | | pymol: 1.8.4 -> 2.1.0Katona László2018-04-25
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* | | | | Merge pull request #39630 from bcdarwin/conglomerateMatthew Justin Bauer2018-05-01
|\ \ \ \ \ | | | | | | | | | | | | conglomerate: init at 2017-09-10
| * | | | | conglomerate: init at 2017-09-10Ben Darwin2018-04-27
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* | | | | | Merge pull request #39586 from MatrixAI/labelImgMatthew Justin Bauer2018-05-01
|\ \ \ \ \ \ | |_|_|/ / / |/| | | | | labelImg: init at 1.6.0
generated by cgit-pink 1.4.1 (git 2.36.1) at 2024-07-25 14:33:30 +0000