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* qt5: rename qmakeHook to qmakeThomas Tuegel2017-06-18
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* qt5: use distinct `lib/qt-5.x` prefix for each minor versionThomas Tuegel2017-06-18
| | | | | Using a distinct prefix for plugins and QML libraries allows multiple Qt 5 minor versions to coexist in the same environment.
* snpeff: 4.3i -> 4.3pJustin Bedo2017-06-13
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* pymol: set PYTHONPATH in a future wayJörg Thalheim2017-06-02
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* pymol: added Pmw + python version bumpKatona László2017-06-02
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* geogebra: 5-0-355-0 -> 5-0-361-0Maximilian Bosch2017-05-30
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* msieve: update and enable on DarwinDan Peebles2017-05-26
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* ecm: enable on DarwinDan Peebles2017-05-26
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* Merge branch 'master' into stagingVladimír Čunát2017-05-24
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| * minisat: fix maintainerSamuel Leathers2017-05-22
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| * stp: 2014.01.07 -> 2.2.0Jörg Thalheim2017-05-22
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| * cryptominisat: init at 5.0.1Jörg Thalheim2017-05-22
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| * minisatUnstable: init at 2013-09-25Jörg Thalheim2017-05-22
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* | Merge remote-tracking branch 'upstream/master' into HEADFrederik Rietdijk2017-05-22
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| * coq: nix-buffer: Inherit variables to PG shellShea Levy2017-05-22
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| * Merge pull request #25231 from veprbl/root_6.09.02Jörg Thalheim2017-05-20
| |\ | | | | | | root: 6.08.02 -> 6.09.02
| | * sherpa: fix for llvm 4Dmitry Kalinkin2017-05-02
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| | * root: 6.08.02 -> 6.09.02Dmitry Kalinkin2017-04-26
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This also fixes breakage on darwin due to LLVM4.0 migration. I had to enable opengl because otherwise macOS build is broken. See root commit 23f8871c7 ('Do not include OpenGL directly but use our TGLIncludes for that purpose.') I've enabled xml because TUnfold depends on it.
| * | treewide: s,enableParallelBuild(s),enableParallelBuilding,gJoachim Fasting2017-05-20
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| * | cvc4: 1.5pre-smtcomp2016 -> unstable-2017-05-18 (#25808)marcnnn2017-05-20
| | | | | | | | | | | | | | | | | | | | | | | | * cvc4: 1.5pre-smtcomp2016 -> 1.5pre-20170514 * cvc4: use stable url upstream delete their tarballs
| * | coq: Add emacs buffer setupShea Levy2017-05-20
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* | | treewide: fixup packages with RPATH problemsVladimír Čunát2017-05-16
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* | openmvs: init at current master (#25672)Matthew Daiter2017-05-12
| | | | | | | | | | | | | | | | * openmvs: init at current master * openmvs: simplify expression * openmvs: init at unstable-2017-05-01
* | Merge pull request #25594 from mimadrid/update/htslib-1.4Jörg Thalheim2017-05-11
|\ \ | | | | | | Update/htslib 1.4
| * | bcftools: 1.3.1 -> 1.4mimadrid2017-05-11
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| * | samtools: 1.3.1 -> 1.4mimadrid2017-05-07
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* | | Merge pull request #25588 from mimadrid/update/weka-3.8.1Peter Hoeg2017-05-09
|\ \ \ | | | | | | | | weka: 3.8.0 -> 3.8.1
| * | | weka: 3.8.0 -> 3.8.1mimadrid2017-05-07
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* | | openmvg: clarify Git versionmdaiter2017-05-09
| | | | | | | | | | | | fixes #25615
* | | Merge pull request #25590 from mimadrid/update/cytoscape-3.5.1Frederik Rietdijk2017-05-09
|\ \ \ | | | | | | | | cytoscape: 3.4.0 -> 3.5.1
| * | | cytoscape: 3.4.0 -> 3.5.1mimadrid2017-05-07
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* | | Merge pull request #25480 from mdaiter/openmvgMichael Raskin2017-05-05
|\ \ \ | | | | | | | | openmvg: init at v1.1
| * | | openmvg: init at v1.1Matthew Daiter2017-05-05
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* | | | kicad: update to 4.0.6Daniel Frank2017-05-04
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* | | | R: import upstream patch to fix broken "R CMD Sweave" commandPeter Simons2017-05-03
|/ / / | | | | | | | | | | | | The command "R CMD Sweave" always exits with error code "1", even if the command was successful. This upstream patch remedies this issue.
* | | treewide: Always use integers for meta.priorityAneesh Agrawal2017-05-02
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Meta attributes types are now enforce as of commit 90b9719f4fc95e54400a66bffcc8044c568cfa4b, so ensure meta.priority is always set to an integer. This fixes evaluation of `linuxPackages_latest.virtualbox` (the impetus for this commit) and other packages that use lowPrio or hiPrio.
* | | Merge pull request #25164 from marsam/masterMichael Raskin2017-05-01
|\ \ \ | | | | | | | | Homogenize abc-verifier, dwm, osmctools homepages
| * | | abc-verifier: Add http url scheme to abc homepageMario Rodas2017-04-23
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* | | | Merge pull request #25117 from lucas8/cubicleMichael Raskin2017-05-01
|\ \ \ \ | | | | | | | | | | cubicle: init at 1.0.2
| * | | | cubicle: init at 1.0.2lucas82017-04-25
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* | | | Merge pull request #24085 from bcdarwin/antsMichael Raskin2017-04-30
|\ \ \ \ | | | | | | | | | | ants: set $ANTSPATH variable in shell scripts
| * | | | ants: set $ANTSPATH variable in shell scriptsBen Darwin2017-03-22
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* | | | | Merge pull request #25217 from LnL7/darwin-csdpDaiderd Jordan2017-04-30
|\ \ \ \ \ | | | | | | | | | | | | csdp: fix darwin build
| * | | | | csdp: fix darwin buildDaiderd Jordan2017-04-27
| | |_|_|/ | |/| | | | | | | | | | | | | the build sets CC=clang causing it to essentially ignore the cc wrapper
* | | | | Merge pull request #21822 from rht/masterMichael Raskin2017-04-30
|\ \ \ \ \ | | | | | | | | | | | | coq_HEAD: Update to the latest commit
| * | | | | coq_HEAD: Update once morerht2017-03-18
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| * | | | | Fold in specific ocaml version choice into letrht2017-03-18
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| * | | | | coq_HEAD: Update to the latest commitrht2017-03-18
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* | | | | | geogebra: 5-0-350-0 -> 5-0-355-0 (#25324)Maximilian Bosch2017-04-29
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* | | | | | speedcrunch: allow building with qt 5.8Peter Hoeg2017-04-28
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