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| * Merge pull request #39197 from r-ryantm/auto-update/picard-toolsJörg Thalheim2018-04-21
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| | * picard-tools: 2.18.1 -> 2.18.2R. RyanTM2018-04-20
| * | samtools: 1.7 -> 1.8R. RyanTM2018-04-10
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* | ezminc: init at 2017-08-29Ben Darwin2018-04-09
* | address license/version issues for PR #29782Ben Darwin2018-04-09
* | inormalize: init at 1.0.20 (develop branch)Ben Darwin2018-04-09
* | n3: init at 1.0.20Ben Darwin2018-04-09
* | minc-widgets: init at "1.0.0" (package seems to lack a consistent version)Ben Darwin2018-04-09
* | mni_autoreg: init at 0.99.70Ben Darwin2018-04-09
* | minc-tools: 2.3.00 -> 2.3.01 (develop branch)Ben Darwin2018-04-09
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* Merge pull request #38165 from r-ryantm/auto-update/picard-toolsMatthew Justin Bauer2018-04-08
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| * picard-tools: 2.17.11 -> 2.18.1R. RyanTM2018-03-30
* | bcftools: python/perl is needed for shebangsJörg Thalheim2018-04-08
* | bcftools: 1.7 -> 1.8R. RyanTM2018-04-07
* | igv: 2.4.9 -> 2.4.10R. RyanTM2018-03-31
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* Merge pull request #36846 from jbedo/snpeffMatthew Justin Bauer2018-03-19
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| * snpeff: 4.3t -> 4.3qJustin Bedo2018-03-12
* | Merge pull request #37079 from ryantm/auto-update/picard-toolsMatthew Justin Bauer2018-03-19
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| * | picard-tools: 2.17.10 -> 2.17.11Ryan Mulligan2018-03-15
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* | Merge pull request #37009 from ryantm/auto-update/igvGabriel Ebner2018-03-17
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| * | igv: 2.4.8 -> 2.4.9Ryan Mulligan2018-03-14
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* / paml: 4.9c -> 4.9gRyan Mulligan2018-03-09
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* picard-tools: 2.17.4 -> 2.17.10Ryan Mulligan2018-02-28
* igv: 2.4.6 -> 2.4.8Ryan Mulligan2018-02-26
* Merge pull request #35555 from ryantm/auto-update/bcftools-1.6-to-1.7adisbladis2018-02-26
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| * bcftools: 1.6 -> 1.7Ryan Mulligan2018-02-25
* | bowtie2: 2.3.4 -> 2.3.4.1Ryan Mulligan2018-02-25
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* Merge pull request #34530 from unode/samtools-oldJörg Thalheim2018-02-10
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| * samtools_0_1_19: init at 0.1.19Renato Alves2018-02-02
* | Merge pull request #34531 from unode/raxmlJörg Thalheim2018-02-10
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| * | RAxML: init at 8.2.11 (SSE3 & MPI)Renato Alves2018-02-02
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* / samtools: 1.6 -> 1.7Renato Alves2018-02-06
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* muscle: init at 3.8.31Renato Alves2018-01-28
* Merge pull request #34156 from arcadio/starAlexey Shmalko2018-01-27
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| * star: init at 2.5.3aArcadio Rubio García2018-01-24
* | Merge pull request #34119 from arcadio/masteradisbladis2018-01-25
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| * | igv: 2.3.98 -> 2.4.6Arcadio Rubio García2018-01-21
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* | Merge pull request #34199 from arcadio/kallistoSamuel Leathers2018-01-24
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| * | kallisto: init at 0.43.1Arcadio Rubio García2018-01-24
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* | Merge pull request #34125 from arcadio/bwaadisbladis2018-01-23
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| * | bwa: 0.7.16a -> 0.7.17Arcadio Rubio García2018-01-22
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* | Merge pull request #34139 from arcadio/bedtoolsadisbladis2018-01-23
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| * | bedtools: 2.26.0 -> 2.27.1Arcadio Rubio García2018-01-22
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* | Merge pull request #34140 from arcadio/picardadisbladis2018-01-22
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| * | picard-tools: 2.7.1 -> 2.17.4Arcadio Rubio García2018-01-22
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* / bowtie2: 2.3.3.1 -> 2.3.4Arcadio Rubio García2018-01-22
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* dcm2niix: cmake is native, styleAshley Gillman2018-01-15
* dcm2niix: init at 1.0.20170130Ashley Gillman2018-01-15
* snpeff: 4.3p -> 4.3tJustin Bedo2017-12-21
* libminc: fix build after hdf5 upgrade by using hdf5_1_8Orivej Desh2017-12-01
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