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* Merge branch 'master' of github.com:NixOS/nixpkgs into feat/acme/delayGregor Kleen2018-04-21
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| * hydra-eval-faliures: Print Dependency failures as well as direct failures ↵berdario2018-04-21
| | | | | | | | | | | | | | | | | | | | and update to Python3 (#29760) * Print Dependency failures as well as direct failures and update to Python3 some package fail due to non-exposed dependencies and would thus not appear in the list, for example gcj * hydra-eval-failures: simpler hashbang
| * Merge pull request #30908 from kierdavis/boinc-fhsMatthew Justin Bauer2018-04-21
| |\ | | | | | | boinc service: use an FHS environment (CI now passing)
| | * boinc service: use an FHS environmentKier Davis2017-11-24
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | While BOINC itself is open source, many of the project applications it runs are not. Additionally, these project applications are checksummed before they are run, so they can't be patched. This means we can't make the project applications find required binaries/libraries on a NixOS system. The solution is therefore to make said binaries and libraries appear in the expected locations, by wrapping BOINC in an FHS-compatible environment [1]. An `extraEnvPackages` is also added to allow more packages to be added into this environment. The documentation for this option describes some practical use cases for it. [1] https://nixos.org/nixpkgs/manual/#sec-fhs-environments Version 2: fixed Docbook list formatting, minor rewording Version 3: rebase onto master (9c048f4fb66adc33c6b379f2edefcb615fd53de6) Version 4: fix usage of targetPkgs argument to buildFHSUserEnv
| * | Merge pull request #27257 from hectorj/init-zipkin-server-1.28.1Matthew Justin Bauer2018-04-21
| |\ \ | | | | | | | | zipkin-server: init at 1.28.1
| | * | zipkin-server => zipkin in all-packageshectorj2017-07-09
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| | * | remove extra-linehectorj2017-07-09
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| | * | zipkin-server: init at 1.28.1hectorj2017-07-09
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| * | | Merge pull request #27250 from ck3d/fix-emscriptenStdenv-autogenMatthew Justin Bauer2018-04-21
| |\ \ \ | | | | | | | | | | emsciptenStdenv: allow reuse without ./autogen.sh
| | * | | emsciptenStdenv: allow reuse without ./autogen.shChristian Kögler2018-03-20
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | The configure phase of emscriptenStdenv exspects an ./autogen.sh script, which is anoying when this step is not needed. Good example is emscriptenPackages.zlib which needs to override configurePhase.
| * | | | Merge pull request #31724 from pngwjpgh/feat/nsd/dnssecMatthew Justin Bauer2018-04-21
| |\ \ \ \ | | | | | | | | | | | | Automatic DNSSEC signatures & key schedule for nsd
| | * \ \ \ Merge branch 'master' into feat/nsd/dnssecMatthew Justin Bauer2018-04-21
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| | * | | | | nixpkgs/bind: use python3Gregor Kleen2017-11-17
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| | * | | | | nixos/nsd: automatic DNSSEC using BIND toolsetGregor Kleen2017-11-16
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| * | | | | | Revert "libupnp: 1.6.21 -> 1.8.3"Jörg Thalheim2018-04-21
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | This reverts commit ee45689f1430c564acda19efa5d2b12dd267cafb. 1.8.x branch break compatibility. This should become a new package instead.
| * | | | | | cloudfoundry-cli: 6.32.0 -> 6.36.1Jörg Thalheim2018-04-21
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* | | | | | | Merge branch 'master' into feat/acme/delayMatthew Justin Bauer2018-04-21
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| * | | | | | Merge pull request #38658 from dasJ/dnsdist-pkgJoachim F2018-04-21
| |\ \ \ \ \ \ | | |_|/ / / / | |/| | | | | dnsdist: init at 1.3.0
| | * | | | | dnsdist: init at 1.3.0Janne Heß2018-04-09
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| * | | | | | Merge pull request #39095 from moaxcp/masterJoachim F2018-04-21
| |\ \ \ \ \ \ | | | | | | | | | | | | | | | | visualvm: 1.3.9 -> 1.4
| | * | | | | | visualvm: 1.3.9 -> 1.4John Mercier2018-04-18
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| * | | | | | | cocoapods: init at 1.3.1 (#32583)Peter Romfeld2018-04-21
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * cocoapods: init at 1.3.1 * requires xcode
| * | | | | | | Merge pull request #31969 from Assassinkin/masterMatthew Justin Bauer2018-04-21
| |\ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | Update sssd integration with pam as documented by RedHat
| | * | | | | | | Update sssd integration with pam as documented by RedHatAssassinkin2017-11-22
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| * | | | | | | | Merge pull request #38664 from bcdarwin/minc_ecosystemJörg Thalheim2018-04-21
| |\ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | MINC ecosystem
| | * | | | | | | | perlPackages.MNI-Perllib: use callPackage instead of importJörg Thalheim2018-04-21
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| | * | | | | | | | Merge branch 'master' into minc_ecosystemJörg Thalheim2018-04-21
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| | * | | | | | | | | c3d: updated rev still won't compile; mark brokenBen Darwin2018-04-10
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| | * | | | | | | | | Merge branch 'minc_ecosystem' of github.com:bcdarwin/nixpkgs into minc_ecosystemBen Darwin2018-04-10
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| | | * | | | | | | | | metadata fixes: EBTKS, MNI::Perllib, Text::FormatBen Darwin2018-04-10
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| | * | | | | | | | | | elastix: 4.8 -> 4.9.0Ben Darwin2018-04-10
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| | * | | | | | | | | delete broken aliasBen Darwin2018-04-09
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| | * | | | | | | | | disable a second libminc testBen Darwin2018-04-09
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| | * | | | | | | | | oobicpl: init at 2016-03-02Ben Darwin2018-04-09
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| | * | | | | | | | | arguments: init at 2015-11-30Ben Darwin2018-04-09
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| | * | | | | | | | | fix EBTKS version namingBen Darwin2018-04-09
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| | * | | | | | | | | ezminc: init at 2017-08-29Ben Darwin2018-04-09
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| | * | | | | | | | | bicpl: init at 2017-09-10Ben Darwin2018-04-09
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| | * | | | | | | | | itk: enable more MINC supportBen Darwin2018-04-09
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| | * | | | | | | | | address license/version issues for PR #29782Ben Darwin2018-04-09
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| | * | | | | | | | | inormalize: init at 1.0.20 (develop branch)Ben Darwin2018-04-09
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| | * | | | | | | | | n3: init at 1.0.20Ben Darwin2018-04-09
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| | * | | | | | | | | minc-widgets: init at "1.0.0" (package seems to lack a consistent version)Ben Darwin2018-04-09
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| | * | | | | | | | | mni_autoreg: init at 0.99.70Ben Darwin2018-04-09
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| | * | | | | | | | | perlPackages.MNI-Perllib: init at 0.08Ben Darwin2018-04-09
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| | * | | | | | | | | EBTKS: init at 1.6.50 (develop branch)Ben Darwin2018-04-09
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| | * | | | | | | | | minc-tools: 2.3.00 -> 2.3.01 (develop branch)Ben Darwin2018-04-09
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| | * | | | | | | | | perlPackages.TextFormat: init at 0.60Ben Darwin2018-04-09
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| | * | | | | | | | | libminc: 2.3.00 -> 2.3.01 (develop branch)Ben Darwin2018-04-09
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| * | | | | | | | | | Merge pull request #32311 from jbgi/patch-1Matthew Justin Bauer2018-04-21
| |\ \ \ \ \ \ \ \ \ \ | | | | | | | | | | | | | | | | | | | | | | | | Add bash to jira PATH: required by health checks.