diff options
Diffstat (limited to 'pkgs/top-level/python-packages.nix')
| -rw-r--r-- | pkgs/top-level/python-packages.nix | 454 |
1 files changed, 108 insertions, 346 deletions
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 355d470ca5d3..3222e4f1155e 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -175,6 +175,8 @@ in { }; }; + asn1crypto = callPackage ../development/python-modules/asn1crypto { }; + # packages defined elsewhere bap = callPackage ../development/python-modules/bap { @@ -4542,25 +4544,39 @@ in { cryptography = buildPythonPackage rec { # also bump cryptography_vectors - name = "cryptography-${version}"; - version = "1.7.2"; + pname = "cryptography"; + name = "${pname}${version}"; + version = "1.8.1"; - src = pkgs.fetchurl { - url = "mirror://pypi/c/cryptography/${name}.tar.gz"; - sha256 = "1ad9zmzi31fnz31qfchxcwiydvlxq88xndlgsvzr7m537n5vd347"; + src = fetchPypi { + inherit pname version; + sha256 = "323524312bb467565ebca7e50c8ae5e9674e544951d28a2904a50012a8828190"; }; - buildInputs = [ pkgs.openssl self.pretend self.cryptography_vectors - self.iso8601 self.pyasn1 self.pytest_29 self.py self.hypothesis self.pytz ] + buildInputs = [ pkgs.openssl self.cryptography_vectors ] ++ optional stdenv.isDarwin pkgs.darwin.apple_sdk.frameworks.Security; - propagatedBuildInputs = with self; [ six idna ipaddress pyasn1 cffi pyasn1-modules pytz ] - ++ optional (pythonOlder "3.4") self.enum34; + propagatedBuildInputs = with self; [ + idna + asn1crypto + packaging + six + ] ++ optional (pythonOlder "3.4") enum34 + ++ optional (pythonOlder "3.3") ipaddress + ++ optional (!isPyPy) cffi; + + checkInputs = with self; [ + pytest + pretend + iso8601 + pytz + hypothesis + ]; # The test assumes that if we're on Sierra or higher, that we use `getentropy`, but for binary # compatibility with pre-Sierra for binary caches, we hide that symbol so the library doesn't # use it. This boils down to them checking compatibility with `getentropy` in two different places, # so let's neuter the second test. - patchPhase = '' + postPatch = '' substituteInPlace ./tests/hazmat/backends/test_openssl.py --replace '"16.0"' '"99.0"' ''; @@ -4571,13 +4587,17 @@ in { cryptography_vectors = buildPythonPackage rec { # also bump cryptography - name = "cryptography_vectors-${version}"; - version = "1.7.2"; + pname = "cryptography_vectors"; + name = "${pname}${version}"; + version = "1.8.1"; - src = pkgs.fetchurl { - url = "mirror://pypi/c/cryptography-vectors/${name}.tar.gz"; - sha256 = "1p5cw3dzgcpzmp81qb9860hn9qlcvr4rnf0fy31fbvhxl7lfxr2b"; + src = fetchPypi { + inherit pname version; + sha256 = "2fd61facea08800ca98ac923f6d02f48a7ae6648025b29cdeb51987c1532add6"; }; + + # No tests included + doCheck = false; }; oslo-vmware = buildPythonPackage rec { @@ -4788,11 +4808,13 @@ in { idna = buildPythonPackage rec { - name = "idna-2.0"; + pname = "idna"; + version = "2.5"; + name = "${pname}-${version}"; - src = pkgs.fetchurl { - url = "mirror://pypi/i/idna/${name}.tar.gz"; - sha256 = "0frxgmgi234lr9hylg62j69j4ik5zhg0wz05w5dhyacbjfnrl68n"; + src = fetchPypi { + inherit pname version; + sha256 = "3cb5ce08046c4e3a560fc02f138d0ac63e00f8ce5901a56b32ec8b7994082aab"; }; meta = { @@ -4928,6 +4950,9 @@ in { sha256 = "0r5r7ygz9m6d2bklflbl84cqhjkc2q12xgis8268ygjh30g2q3wk"; }; + # No tests in archive + doCheck = false; + meta = { homepage = https://github.com/alex/pretend; license = licenses.bsd3; @@ -5637,12 +5662,13 @@ in { }); dask = buildPythonPackage rec { - name = "dask-${version}"; - version = "0.13.0"; + pname = "dask"; + name = "${pname}-${version}"; + version = "0.14.1"; - src = pkgs.fetchurl { - url = "mirror://pypi/d/dask/${name}.tar.gz"; - sha256 = "1f8r6jj9666cnvx3f8bilcx0017smmlw4i4v2p1nwxshs0k514hs"; + src = fetchPypi { + inherit pname version; + sha256 = "46c8ef9aa41a5755f2194b535bff7fdef1343d3993ab294b198caf95155ec94e"; }; buildInputs = with self; [ pytest ]; @@ -6120,11 +6146,11 @@ in { decorator = buildPythonPackage rec { name = "decorator-${version}"; - version = "4.0.10"; + version = "4.0.11"; src = pkgs.fetchurl { url = "mirror://pypi/d/decorator/${name}.tar.gz"; - sha256 = "9c6e98edcb33499881b86ede07d9968c81ab7c769e28e9af24075f0a5379f070"; + sha256 = "953d6bf082b100f43229cf547f4f97f97e970f5ad645ee7601d55ff87afdfe76"; }; meta = { @@ -6289,16 +6315,14 @@ in { dill = buildPythonPackage rec { name = "dill-${version}"; - version = "0.2.5"; + version = "0.2.6"; src = pkgs.fetchurl { - url = "mirror://pypi/d/dill/${name}.tgz"; - sha256 = "431c9d46e190dcdf1397234cf659d66e2e22e33b0474ed6ee2d0b16c9c0ea319"; + url = "mirror://pypi/d/dill/${name}.zip"; + sha256 = "6c1ccca68be483fa8c66e85a89ffc850206c26373aa77a97b83d8d0994e7f1fd"; }; - propagatedBuildInputs = with self; [objgraph]; - - # failing tests + # TypeError: don't know how to make test from: {'byref': False, 'recurse': False, 'protocol': 3, 'fmode': 0} doCheck = false; meta = { @@ -13057,96 +13081,11 @@ in { }; }; - ipykernel = buildPythonPackage rec { - version = "4.5.2"; - name = "ipykernel-${version}"; - - src = pkgs.fetchurl { - url = "mirror://pypi/i/ipykernel/${name}.tar.gz"; - sha256 = "5a54f25f0e6c8ee74c362c23f9a95e10e74c6b7f5ef42059c861ff6f26d89462"; - }; - - buildInputs = with self; [ nose ] ++ optionals isPy27 [mock]; - propagatedBuildInputs = with self; [ - ipython - jupyter_client - pexpect - traitlets - tornado - ]; - - # Tests require backends. - # I don't want to add all supported backends as propagatedBuildInputs - doCheck = false; - - meta = { - description = "IPython Kernel for Jupyter"; - homepage = http://ipython.org/; - license = licenses.bsd3; - maintainers = with maintainers; [ fridh ]; - }; - }; - - ipyparallel = buildPythonPackage rec { - version = "6.0.0"; - name = "ipyparallel-${version}"; - - src = pkgs.fetchurl { - url = "mirror://pypi/i/ipyparallel/${name}.tar.gz"; - sha256 = "9bb5032e98a8c73ddb3da5fb8eecd93c676a5278b68799ab19257b348a0a27f6"; - }; - - buildInputs = with self; [ nose ]; - - propagatedBuildInputs = with self; [ dateutil ipython_genutils decorator pyzmq ipython jupyter_client ipykernel tornado - ] ++ optionals (!isPy3k) [ futures ]; - - # Requires access to cluster - doCheck = false; - - meta = { - description = "Interactive Parallel Computing with IPython"; - homepage = http://ipython.org/; - license = licenses.bsd3; - maintainers = with maintainers; [ fridh ]; - }; - - }; - - ipython = buildPythonPackage rec { - version = "5.3.0"; - name = "ipython-${version}"; - - src = pkgs.fetchurl { - url = "mirror://pypi/i/ipython/${name}.tar.gz"; - sha256 = "bf5e615e7d96dac5a61fbf98d9e2926d98aa55582681bea7e9382992a3f43c1d"; - }; - - prePatch = stdenv.lib.optionalString stdenv.isDarwin '' - substituteInPlace setup.py --replace "'gnureadline'" " " - ''; + ipykernel = callPackage ../development/python-modules/ipykernel { }; - buildInputs = with self; [ nose pkgs.glibcLocales pygments ] ++ optionals isPy27 [mock]; + ipyparallel = callPackage ../development/python-modules/ipyparallel { }; - propagatedBuildInputs = with self; - [ backports_shutil_get_terminal_size decorator pickleshare prompt_toolkit - simplegeneric traitlets requests2 pathlib2 pexpect ] - ++ optionals stdenv.isDarwin [appnope]; - - LC_ALL="en_US.UTF-8"; - - doCheck = false; # Circular dependency with ipykernel - - checkPhase = '' - nosetests - ''; - meta = { - description = "IPython: Productive Interactive Computing"; - homepage = http://ipython.org/; - license = licenses.bsd3; - maintainers = with maintainers; [ bjornfor jgeerds fridh ]; - }; - }; + ipython = callPackage ../development/python-modules/ipython { }; ipython_genutils = buildPythonPackage rec { version = "0.2.0"; @@ -13173,28 +13112,7 @@ in { }; - ipywidgets = buildPythonPackage rec { - version = "5.2.2"; - name = "ipywidgets-${version}"; - - src = pkgs.fetchurl { - url = "mirror://pypi/i/ipywidgets/${name}.tar.gz"; - sha256 = "baf6098f054dd5eacc2934b8ea3bef908b81ca8660d839f1f940255a72c660d2"; - }; - - # Tests are not distributed - doCheck = false; - - buildInputs = with self; [ nose pytest ]; - propagatedBuildInputs = with self; [ipython ipykernel traitlets notebook widgetsnbextension ]; - - meta = { - description = "IPython HTML widgets for Jupyter"; - homepage = http://ipython.org/; - license = licenses.bsd3; - maintainers = with maintainers; [ fridh ]; - }; - }; + ipywidgets = callPackage ../development/python-modules/ipywidgets { }; ipaddr = buildPythonPackage rec { name = "ipaddr-2.1.10"; @@ -13325,30 +13243,7 @@ in { jabberbot = callPackage ../development/python-modules/jabberbot.nix {}; - jedi = buildPythonPackage (rec { - name = "jedi-0.9.0"; - - src = pkgs.fetchurl { - url = "mirror://pypi/j/jedi/${name}.tar.gz"; - sha256 = "0c8x962ynpx001fdvp07m2q5jk4igkxbj3rmnydavphvlgxijk1v"; - }; - - buildInputs = [ self.pytest ]; - - checkPhase = '' - py.test test - ''; - - # 7 failed - doCheck = false; - - meta = { - homepage = https://github.com/davidhalter/jedi; - description = "An autocompletion tool for Python that can be used for text editors"; - license = licenses.lgpl3Plus; - maintainers = with maintainers; [ garbas ]; - }; - }); + jedi = callPackage ../development/python-modules/jedi { }; jellyfish = buildPythonPackage rec { version = "0.5.2"; @@ -13487,32 +13382,7 @@ in { inherit (pkgs.jsonnet) name src; }; - jupyter_client = buildPythonPackage rec { - version = "5.0.0"; - name = "jupyter_client-${version}"; - - src = pkgs.fetchurl { - url = "mirror://pypi/j/jupyter_client/${name}.tar.gz"; - sha256 = "2766f9c2deb9ae826e65d53a56a36d69b184f63d0dcb7710835273327126bc5b"; - }; - - buildInputs = with self; [ nose ]; - propagatedBuildInputs = with self; [traitlets jupyter_core pyzmq dateutil] ++ optional isPyPy py; - - checkPhase = '' - nosetests -v - ''; - - # Circular dependency with ipykernel - doCheck = false; - - meta = { - description = "Jupyter protocol implementation and client libraries"; - homepage = http://jupyter.org/; - license = licenses.bsd3; - maintainers = with maintainers; [ fridh ]; - }; - }; + jupyter_client = callPackage ../development/python-modules/jupyter_client { }; jupyter_core = buildPythonPackage rec { version = "4.3.0"; @@ -13928,26 +13798,7 @@ in { }; }; - line_profiler = buildPythonPackage rec{ - version = "1.0"; - name = "line_profiler-${version}"; - - src = pkgs.fetchurl { - url = "mirror://pypi/l/line_profiler/${name}.tar.gz"; - sha256 = "a9e0c9ffa814f1215107c86c890afa8e63bec5a37d951f6f9d3668c1df2b1900"; - }; - - buildInputs = with self; [ cython ]; - - disabled = isPyPy; - - meta = { - description = "Line-by-line profiler"; - homepage = https://github.com/rkern/line_profiler; - license = licenses.bsd3; - maintainers = with maintainers; [ fridh ]; - }; - }; + line_profiler = callPackage ../development/python-modules/line_profiler { }; linode = buildPythonPackage rec { name = "linode-${version}"; @@ -14059,7 +13910,7 @@ in { }; }; - llvmlite = callPackage ../development/python-modules/llvmlite {llvm=pkgs.llvm_38;}; + llvmlite = callPackage ../development/python-modules/llvmlite {llvm=pkgs.llvm_39;}; lockfile = buildPythonPackage rec { pname = "lockfile"; @@ -14209,17 +14060,19 @@ in { src = pkgs.file.src; patchPhase = '' - substituteInPlace python/magic.py --replace "find_library('magic')" "'${pkgs.file}/lib/libmagic.so'" + substituteInPlace python/magic.py --replace "find_library('magic')" "'${pkgs.file}/lib/libmagic.${if stdenv.isDarwin then "dylib" else "so"}'" ''; - buildInputs = with self; [ python pkgs.file ]; + buildInputs = with self; [ pkgs.file ]; preConfigure = "cd python"; + # No test suite + doCheck = false; + meta = { description = "A Python wrapper around libmagic"; homepage = http://www.darwinsys.com/file/; - broken = true; }; }; @@ -15154,6 +15007,9 @@ in { sha256 = "bda6abb8188d9abb429bd17ed15bc7433f77f1b05a78cfff761711ed81daa7a2"; }; + # No tests in archive + doCheck = false; + meta = { homepage = http://github.com/mrocklin/multipledispatch/; description = "A relatively sane approach to multiple dispatch in Python"; @@ -15734,16 +15590,28 @@ in { }; netaddr = buildPythonPackage rec { - name = "netaddr-0.7.18"; - doCheck = !isPy35; # https://github.com/drkjam/netaddr/issues/117 + pname = "netaddr"; + version = "0.7.19"; + name = "${pname}-${version}"; - src = pkgs.fetchurl { - url = "mirror://pypi/n/netaddr/${name}.tar.gz"; - sha256 = "06dxjlbcicq7q3vqy8agq11ra01kvvd47j4mk6dmghjsyzyckxd1"; + src = fetchPypi { + inherit pname version; + sha256 = "38aeec7cdd035081d3a4c306394b19d677623bf76fa0913f6695127c7753aefd"; }; LC_ALL = "en_US.UTF-8"; - buildInputs = [ pkgs.glibcLocales ]; + buildInputs = with self; [ pkgs.glibcLocales pytest ]; + + checkPhase = '' + py.test netaddr/tests + ''; + + patches = [ + (pkgs.fetchpatch { + url = https://github.com/drkjam/netaddr/commit/2ab73f10be7069c9412e853d2d0caf29bd624012.patch; + sha256 = "08rn1s3w9424jhandy4j9sksy852ny00088zh15nirw5ajqg1dn7"; + }) + ]; meta = { homepage = https://github.com/drkjam/netaddr/; @@ -16099,35 +15967,7 @@ in { buildInputs = with self; [ nose ]; }; - notebook = buildPythonPackage rec { - version = "4.4.1"; - name = "notebook-${version}"; - - src = pkgs.fetchurl { - url = "mirror://pypi/n/notebook/${name}.tar.gz"; - sha256 = "dfadef2babd7c04c6c257df7d07d7ba587e503dbb4e4c95305f9a95b8d3a9765"; - }; - - LC_ALL = "en_US.UTF-8"; - - buildInputs = with self; [nose pkgs.glibcLocales] ++ optionals isPy27 [mock]; - - propagatedBuildInputs = with self; [jinja2 tornado ipython_genutils traitlets jupyter_core jupyter_client nbformat nbconvert ipykernel terminado requests2 pexpect]; - - checkPhase = '' - nosetests -v - ''; - - # Certain tests fail due to being in a chroot. - # PermissionError - doCheck = false; - meta = { - description = "The Jupyter HTML notebook is a web-based notebook environment for interactive computing"; - homepage = http://jupyter.org/; - license = licenses.bsd3; - maintainers = with maintainers; [ fridh ]; - }; - }; + notebook = callPackage ../development/python-modules/notebook { }; notify = pkgs.stdenv.mkDerivation (rec { name = "python-notify-0.1.1"; @@ -16281,13 +16121,13 @@ in { # Therefore we create a separate env for it. scons = pkgs.python27.withPackages(ps: [ pkgs.scons ]); in buildPythonPackage rec { - version = "0.5.21.3"; + version = "0.5.25"; name = "Nuitka-${version}"; # Latest version is not yet on PyPi src = pkgs.fetchurl { url = "https://github.com/kayhayen/Nuitka/archive/${version}.tar.gz"; - sha256 = "1i2069hxb94q9kkwcbky59fin8hk1vlj90lwgmrdhn1srvig1cq3"; + sha256 = "11psz0pyj56adv4b3f47hl8jakvp2mc2c85s092a5rsv1la1a0aa"; }; buildInputs = with self; stdenv.lib.optionals doCheck [ vmprof pyqt4 ]; @@ -18206,6 +18046,9 @@ in { checkPhase = '' nosetests -v $out/${python.sitePackages} ''; + postPatch = '' + substituteInPlace setup.py --replace "__builtins__.__NUMPY_SETUP__ = False" "" + ''; }; paho-mqtt = buildPythonPackage rec { @@ -19373,10 +19216,10 @@ in { prompt_toolkit = buildPythonPackage rec { name = "prompt_toolkit-${version}"; - version = "1.0.13"; + version = "1.0.14"; src = pkgs.fetchurl { - sha256 = "33d68ca09f76cd73287fde7df5748ffacf26a8238dd61ee81ac50860ea7c6776"; + sha256 = "cc66413b1b4b17021675d9f2d15d57e640b06ddfd99bb724c73484126d22622f"; url = "mirror://pypi/p/prompt_toolkit/${name}.tar.gz"; }; checkPhase = '' @@ -19796,11 +19639,11 @@ in { }; pygit2 = buildPythonPackage rec { - name = "pygit2-0.24.0"; + name = "pygit2-0.25.0"; src = pkgs.fetchurl { url = "mirror://pypi/p/pygit2/${name}.tar.gz"; - sha256 = "01c155ls0h5pvpdkrk8ld6fscshmz4fchcwxrg488dbij1zdjxms"; + sha256 = "0wf5rp0fvrw7j3j18dvwjq6xqlbm611wd55aphrfpps0v1gxh3ny"; }; preConfigure = ( if stdenv.isDarwin then '' @@ -22331,28 +22174,7 @@ in { }; }; - qtconsole = buildPythonPackage rec { - version = "4.2.1"; - name = "qtconsole-${version}"; - - src = pkgs.fetchurl { - url = "mirror://pypi/q/qtconsole/${name}.tar.gz"; - sha256 = "1vqqx9hdvrg2d336wjyw0vr5b5v97kflkqqvr7ryicr8als7vv15"; - }; - - buildInputs = with self; [ nose ] ++ optionals isPy27 [mock]; - propagatedBuildInputs = with self; [traitlets jupyter_core jupyter_client pygments ipykernel pyqt5]; - - # : cannot connect to X server - doCheck = false; - - meta = { - description = "Jupyter Qt console"; - homepage = http://jupyter.org/; - license = licenses.bsd3; - maintainers = with maintainers; [ fridh ]; - }; - }; + qtconsole = callPackage ../development/python-modules/qtconsole { }; quantities = buildPythonPackage rec { name = "quantities-0.10.1"; @@ -25130,29 +24952,7 @@ in { }; }; - statsmodels = buildPythonPackage rec { - name = "statsmodels-${version}"; - version = "0.6.1"; - - src = pkgs.fetchurl { - url = "mirror://pypi/s/statsmodels/${name}.tar.gz"; - sha256 = "be4e44374aec9e848b73e5a230dee190ac0c4519e1d40f69a5813190b13ec676"; - }; - - buildInputs = with self; [ nose ]; - propagatedBuildInputs = with self; [numpy scipy pandas patsy cython matplotlib]; - - meta = { - description = "Statistical computations and models for use with SciPy"; - homepage = "https://www.github.com/statsmodels/statsmodels"; - license = licenses.bsd3; - maintainers = with maintainers; [ fridh ]; - }; - - # Many tests fail when using latest numpy and pandas. - # See also https://github.com/statsmodels/statsmodels/issues/2602 - doCheck = false; - }; + statsmodels = callPackage ../development/python-modules/statsmodels { }; python_statsd = buildPythonPackage rec { name = "python-statsd-${version}"; @@ -27183,27 +26983,7 @@ EOF }; }; - widgetsnbextension = buildPythonPackage rec { - name = "widgetsnbextension-${version}"; - version = "1.2.6"; - - src = pkgs.fetchurl { - url = "mirror://pypi/w/widgetsnbextension/${name}.tar.gz"; - sha256 = "c618cfb32978c9517caf0b4ef3aec312f8dd138577745e7b0d4abfcc7315ce51"; - }; - - propagatedBuildInputs = with self; [ notebook ]; - - # No tests in archive - doCheck = false; - - meta = { - description = "IPython HTML widgets for Jupyter"; - homepage = http://ipython.org/; - license = self.ipywidgets.meta.license; # Build from same repo - maintainers = with maintainers; [ fridh ]; - }; - }; + widgetsnbextension = callPackage ../development/python-modules/widgetsnbextension { }; willie = buildPythonPackage rec { name = "willie-${version}"; @@ -27345,29 +27125,7 @@ EOF }; }); - xarray = buildPythonPackage rec { - name = "xarray-${version}"; - version = "0.9.1"; - - src = pkgs.fetchurl { - url = "mirror://pypi/x/xarray/${name}.tar.gz"; - sha256 = "89772ed0e23f0e71c3fb8323746374999ecbe79c113e3fadc7ae6374e6dc0525"; - }; - - buildInputs = with self; [ pytest ]; - propagatedBuildInputs = with self; [numpy pandas]; - - checkPhase = '' - py.test $out/${python.sitePackages} - ''; - - meta = { - description = "N-D labeled arrays and datasets in Python"; - homepage = https://github.com/pydata/xarray; - license = licenses.asl20; - maintainers = with maintainers; [ fridh ]; - }; - }; + xarray = callPackage ../development/python-modules/xarray { }; xlwt = callPackage ../development/python-modules/xlwt { }; @@ -32002,6 +31760,10 @@ EOF license = [ licenses.bsd2 licenses.asl20 ]; maintainers = with maintainers; [ bennofs ]; }; + + checkPhase = '' + py.test + ''; }; pypandoc = buildPythonPackage rec { |