2 files changed, 13 insertions, 7 deletions
diff --git a/pkgs/stdenv/cross/default.nix b/pkgs/stdenv/cross/default.nix
index 31ca9f2c82e4..daa9f66615c9 100644
--- a/pkgs/stdenv/cross/default.nix
+++ b/pkgs/stdenv/cross/default.nix
@@ -53,12 +53,15 @@ in lib.init bootStages ++ [
            else buildPackages.gcc;
 
       extraNativeBuildInputs = old.extraNativeBuildInputs
+        ++ lib.optionals
+             (hostPlatform.isLinux && !buildPlatform.isLinux)
+             [ buildPackages.patchelf buildPackages.paxctl ]
+        ++ lib.optional
+             (let f = p: !p.isx86 || p.libc == "musl"; in f hostPlatform && !(f buildPlatform))
+             buildPackages.updateAutotoolsGnuConfigScriptsHook
            # without proper `file` command, libtool sometimes fails
            # to recognize 64-bit DLLs
         ++ lib.optional (hostPlatform.config == "x86_64-w64-mingw32") buildPackages.file
-        ++ lib.optional
-             (hostPlatform.isAarch64 || hostPlatform.isMips || hostPlatform.libc == "musl")
-             buildPackages.updateAutotoolsGnuConfigScriptsHook
         ;
     });
   })
diff --git a/pkgs/stdenv/linux/default.nix b/pkgs/stdenv/linux/default.nix
index de58178a34ba..884730cfe904 100644
--- a/pkgs/stdenv/linux/default.nix
+++ b/pkgs/stdenv/linux/default.nix
@@ -251,7 +251,8 @@ in
     };
     extraNativeBuildInputs = [ prevStage.patchelf prevStage.paxctl ] ++
       # Many tarballs come with obsolete config.sub/config.guess that don't recognize aarch64.
-      lib.optional (!localSystem.isx86) prevStage.updateAutotoolsGnuConfigScriptsHook;
+      lib.optional (!localSystem.isx86 || localSystem.libc == "musl")
+                   prevStage.updateAutotoolsGnuConfigScriptsHook;
   })
 
 
@@ -292,7 +293,8 @@ in
     };
     extraNativeBuildInputs = [ prevStage.patchelf prevStage.xz ] ++
       # Many tarballs come with obsolete config.sub/config.guess that don't recognize aarch64.
-      lib.optional (!localSystem.isx86) prevStage.updateAutotoolsGnuConfigScriptsHook;
+      lib.optional (!localSystem.isx86 || localSystem.libc == "musl")
+                   prevStage.updateAutotoolsGnuConfigScriptsHook;
   })
 
   # Construct the final stdenv.  It uses the Glibc and GCC, and adds
@@ -324,7 +326,8 @@ in
 
       extraNativeBuildInputs = [ prevStage.patchelf prevStage.paxctl ] ++
         # Many tarballs come with obsolete config.sub/config.guess that don't recognize aarch64.
-        lib.optional (!localSystem.isx86) prevStage.updateAutotoolsGnuConfigScriptsHook;
+        lib.optional (!localSystem.isx86 || localSystem.libc == "musl")
+        prevStage.updateAutotoolsGnuConfigScriptsHook;
 
       cc = prevStage.gcc;
 
@@ -357,7 +360,7 @@ in
         ++  [ /*propagated from .dev*/ linuxHeaders
             binutils gcc gcc.cc gcc.cc.lib gcc.expand-response-params
           ]
-          ++ lib.optionals (!localSystem.isx86)
+          ++ lib.optionals (!localSystem.isx86 || localSystem.libc == "musl")
             [ prevStage.updateAutotoolsGnuConfigScriptsHook prevStage.gnu-config ];
 
       overrides = self: super: {