diff options
Diffstat (limited to 'pkgs/development')
21 files changed, 1850 insertions, 13 deletions
diff --git a/pkgs/development/python-modules/tensorflow-estimator/1_15_1.nix b/pkgs/development/python-modules/tensorflow-estimator/1/default.nix index 39c667357c8f..39c667357c8f 100644 --- a/pkgs/development/python-modules/tensorflow-estimator/1_15_1.nix +++ b/pkgs/development/python-modules/tensorflow-estimator/1/default.nix diff --git a/pkgs/development/python-modules/tensorflow-estimator/default.nix b/pkgs/development/python-modules/tensorflow-estimator/2/default.nix index 47ce0f83b02d..47ce0f83b02d 100644 --- a/pkgs/development/python-modules/tensorflow-estimator/default.nix +++ b/pkgs/development/python-modules/tensorflow-estimator/2/default.nix diff --git a/pkgs/development/python-modules/tensorflow-probability/default.nix b/pkgs/development/python-modules/tensorflow-probability/default.nix index 99a3a978a4e7..b585ab4f81b5 100644 --- a/pkgs/development/python-modules/tensorflow-probability/default.nix +++ b/pkgs/development/python-modules/tensorflow-probability/default.nix @@ -42,7 +42,7 @@ let bazelTarget = ":pip_pkg"; fetchAttrs = { - sha256 = "0135nxxvkmjzpd80r1g9fdkk9h62g0xlvp32g5zgk0hkma5kq0bx"; + sha256 = "0sjjj9z1dhilhpc8pq4154czrb79z9cm044jvn75kxcjv6v5l2m5"; }; buildAttrs = { diff --git a/pkgs/development/python-modules/tensorflow-tensorboard/1/default.nix b/pkgs/development/python-modules/tensorflow-tensorboard/1/default.nix new file mode 100644 index 000000000000..e0108aed5ef6 --- /dev/null +++ b/pkgs/development/python-modules/tensorflow-tensorboard/1/default.nix @@ -0,0 +1,66 @@ +{ lib, fetchPypi, buildPythonPackage, isPy3k +, numpy +, wheel +, werkzeug +, protobuf +, grpcio +, markdown +, futures +, absl-py +}: + +# tensorflow/tensorboard is built from a downloaded wheel, because +# https://github.com/tensorflow/tensorboard/issues/719 blocks +# buildBazelPackage. + +buildPythonPackage rec { + pname = "tensorflow-tensorboard"; + version = "1.15.0"; + format = "wheel"; + + src = fetchPypi ({ + pname = "tensorboard"; + inherit version; + format = "wheel"; + } // (if isPy3k then { + python = "py3"; + sha256 = "1g62i3nrgp8q9wfsyqqjkkfnsz7x2k018c26kdh527h1yrjjrbac"; + } else { + python = "py2"; + sha256 = "0l3zc8j2sh7h1z4qpy8kfvclv3kzndri55p10i42q6xahs9phav1"; + })); + + propagatedBuildInputs = [ + numpy + werkzeug + protobuf + markdown + grpcio + absl-py + # not declared in install_requires, but used at runtime + # https://github.com/NixOS/nixpkgs/issues/73840 + wheel + ] ++ lib.optional (!isPy3k) futures; + + # in the absence of a real test suite, run cli and imports + checkPhase = '' + $out/bin/tensorboard --help > /dev/null + ''; + + pythonImportsCheck = [ + "tensorboard" + "tensorboard.backend" + "tensorboard.compat" + "tensorboard.data" + "tensorboard.plugins" + "tensorboard.summary" + "tensorboard.util" + ]; + + meta = with lib; { + description = "TensorFlow's Visualization Toolkit"; + homepage = http://tensorflow.org; + license = licenses.asl20; + maintainers = with maintainers; [ abbradar ]; + }; +} diff --git a/pkgs/development/python-modules/tensorflow-tensorboard/default.nix b/pkgs/development/python-modules/tensorflow-tensorboard/2/default.nix index 202b167c7e6c..202b167c7e6c 100644 --- a/pkgs/development/python-modules/tensorflow-tensorboard/default.nix +++ b/pkgs/development/python-modules/tensorflow-tensorboard/2/default.nix diff --git a/pkgs/development/python-modules/tensorflow/1/bin.nix b/pkgs/development/python-modules/tensorflow/1/bin.nix new file mode 100644 index 000000000000..05d59f9ed0ae --- /dev/null +++ b/pkgs/development/python-modules/tensorflow/1/bin.nix @@ -0,0 +1,121 @@ +{ stdenv +, lib +, fetchurl +, buildPythonPackage +, isPy3k, pythonOlder, isPy38 +, astor +, gast +, google-pasta +, wrapt +, numpy +, six +, termcolor +, protobuf +, absl-py +, grpcio +, mock +, backports_weakref +, tensorflow-estimator_1 +, tensorflow-tensorboard +, cudaSupport ? false +, cudatoolkit ? null +, cudnn ? null +, nvidia_x11 ? null +, zlib +, python +, symlinkJoin +, keras-applications +, keras-preprocessing +, addOpenGLRunpath +}: + +# We keep this binary build for two reasons: +# - the source build doesn't work on Darwin. +# - the source build is currently brittle and not easy to maintain + +assert cudaSupport -> cudatoolkit != null + && cudnn != null + && nvidia_x11 != null; + +# unsupported combination +assert ! (stdenv.isDarwin && cudaSupport); + +let + packages = import ./binary-hashes.nix; + + variant = if cudaSupport then "-gpu" else ""; + pname = "tensorflow${variant}"; + +in buildPythonPackage { + inherit pname; + inherit (packages) version; + format = "wheel"; + + disabled = isPy38; + + src = let + pyVerNoDot = lib.strings.stringAsChars (x: if x == "." then "" else x) python.pythonVersion; + pyver = if stdenv.isDarwin then builtins.substring 0 1 pyVerNoDot else pyVerNoDot; + platform = if stdenv.isDarwin then "mac" else "linux"; + unit = if cudaSupport then "gpu" else "cpu"; + key = "${platform}_py_${pyver}_${unit}"; + in fetchurl packages.${key}; + + propagatedBuildInputs = [ + protobuf + numpy + termcolor + grpcio + six + astor + absl-py + gast + google-pasta + wrapt + tensorflow-estimator_1 + tensorflow-tensorboard + keras-applications + keras-preprocessing + ] ++ lib.optional (!isPy3k) mock + ++ lib.optionals (pythonOlder "3.4") [ backports_weakref ]; + + nativeBuildInputs = lib.optional cudaSupport addOpenGLRunpath; + + # Upstream has a pip hack that results in bin/tensorboard being in both tensorflow + # and the propageted input tensorflow-tensorboard which causes environment collisions. + # another possibility would be to have tensorboard only in the buildInputs + # https://github.com/tensorflow/tensorflow/blob/v1.7.1/tensorflow/tools/pip_package/setup.py#L79 + postInstall = '' + rm $out/bin/tensorboard + ''; + + # Note that we need to run *after* the fixup phase because the + # libraries are loaded at runtime. If we run in preFixup then + # patchelf --shrink-rpath will remove the cuda libraries. + postFixup = let + rpath = stdenv.lib.makeLibraryPath + ([ stdenv.cc.cc.lib zlib ] ++ lib.optionals cudaSupport [ cudatoolkit.out cudatoolkit.lib cudnn nvidia_x11 ]); + in + lib.optionalString stdenv.isLinux '' + rrPath="$out/${python.sitePackages}/tensorflow/:$out/${python.sitePackages}/tensorflow/contrib/tensor_forest/:${rpath}" + internalLibPath="$out/${python.sitePackages}/tensorflow/python/_pywrap_tensorflow_internal.so" + find $out -type f \( -name '*.so' -or -name '*.so.*' \) | while read lib; do + patchelf --set-rpath "$rrPath" "$lib" + ${lib.optionalString cudaSupport '' + addOpenGLRunpath "$lib" + ''} + done + ''; + + + meta = with stdenv.lib; { + description = "Computation using data flow graphs for scalable machine learning"; + homepage = http://tensorflow.org; + license = licenses.asl20; + maintainers = with maintainers; [ jyp abbradar ]; + platforms = [ "x86_64-linux" "x86_64-darwin" ]; + # Python 2.7 build uses different string encoding. + # See https://github.com/NixOS/nixpkgs/pull/37044#issuecomment-373452253 + broken = stdenv.isDarwin && !isPy3k; + }; +} diff --git a/pkgs/development/python-modules/tensorflow/1/binary-hashes.nix b/pkgs/development/python-modules/tensorflow/1/binary-hashes.nix new file mode 100644 index 000000000000..fa4809dc3f19 --- /dev/null +++ b/pkgs/development/python-modules/tensorflow/1/binary-hashes.nix @@ -0,0 +1,43 @@ +{ +version = "1.14.0"; +linux_py_27_cpu = { + url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-1.14.0-cp27-none-linux_x86_64.whl"; + sha256 = "0yywdrfk97dh1bxhibspg0raz70fx9lcczj6xlimqy4xb60clx7k"; +}; +linux_py_35_cpu = { + url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-1.14.0-cp35-cp35m-linux_x86_64.whl"; + sha256 = "1xvyb6xcrjhlwvrmrhn5vs9xy7g98smqmpv4i3hhpry4qyasphhj"; +}; +linux_py_36_cpu = { + url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-1.14.0-cp36-cp36m-linux_x86_64.whl"; + sha256 = "1psd9vyxz9f39dwj77nvrg373sxv3p5vdp9fnz81dpsm0b0mwl44"; +}; +linux_py_37_cpu = { + url = "https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-1.14.0-cp37-cp37m-linux_x86_64.whl"; + sha256 = "0bg2sb1n2ag27r7ww695kg5hb0mjrw4kc5893krmixx2j71860c5"; +}; +linux_py_27_gpu = { + url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-1.14.0-cp27-none-linux_x86_64.whl"; + sha256 = "0y1x91gayg6pjddgl8ndcm63wfzhyv4s5khgl7ffzsgni1ivaqw5"; +}; +linux_py_35_gpu = { + url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-1.14.0-cp35-cp35m-linux_x86_64.whl"; + sha256 = "03piggpbz1jx8m2b95spq3jrdff4w6xx63ji07am7hyw2nsgx3mx"; +}; +linux_py_36_gpu = { + url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-1.14.0-cp36-cp36m-linux_x86_64.whl"; + sha256 = "0ypkp8cfhharsyyikb1qgf44cfm6284km9xswzvzymjzz75vg3gd"; +}; +linux_py_37_gpu = { + url = "https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow_gpu-1.14.0-cp37-cp37m-linux_x86_64.whl"; + sha256 = "0virp8nn2ysx4855hq29kas6fm6b3dsiybwzdxy9nnb9n2d8qlm2"; +}; +mac_py_2_cpu = { + url = "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-1.14.0-py2-none-any.whl"; + sha256 = "14f86k3pgq7z6i4s4im55zpp38f0drnm7xlclavsgcc0nxnj3z26"; +}; +mac_py_3_cpu = { + url = "https://storage.googleapis.com/tensorflow/mac/cpu/tensorflow-1.14.0-py3-none-any.whl"; + sha256 = "0f3swpcjfgqhj6h5wnx8snc0xjkx4hnkqx83fmlrwpncs8c131d3"; +}; +} diff --git a/pkgs/development/python-modules/tensorflow/default.nix b/pkgs/development/python-modules/tensorflow/1/default.nix index 7c80452b20fd..78843c612ee1 100644 --- a/pkgs/development/python-modules/tensorflow/default.nix +++ b/pkgs/development/python-modules/tensorflow/1/default.nix @@ -1,13 +1,13 @@ -{ stdenv, pkgs, bazel_0, buildBazelPackage, lib, fetchFromGitHub, fetchpatch, symlinkJoin +{ stdenv, pkgs, bazel_0_26, buildBazelPackage, lib, fetchFromGitHub, fetchpatch, symlinkJoin , addOpenGLRunpath # Python deps , buildPythonPackage, isPy3k, isPy27, pythonOlder, pythonAtLeast, python # Python libraries -, numpy, tensorflow-tensorboard, backports_weakref, mock, enum34, absl-py +, numpy, tensorflow-tensorboard_1, backports_weakref, mock, enum34, absl-py , future, setuptools, wheel, keras-preprocessing, keras-applications, google-pasta , functools32 , opt-einsum -, termcolor, grpcio, six, wrapt, protobuf, tensorflow-estimator_1_15_1 +, termcolor, grpcio, six, wrapt, protobuf, tensorflow-estimator_1 # Common deps , git, swig, which, binutils, glibcLocales, cython # Common libraries @@ -94,7 +94,7 @@ let bazel-build = buildBazelPackage { name = "${pname}-${version}"; - bazel = bazel_0; + bazel = bazel_0_26; src = fetchFromGitHub { owner = "tensorflow"; @@ -105,9 +105,9 @@ let patches = [ # Work around https://github.com/tensorflow/tensorflow/issues/24752 - ./no-saved-proto.patch + ../no-saved-proto.patch # Fixes for NixOS jsoncpp - ./system-jsoncpp.patch + ../system-jsoncpp.patch # https://github.com/tensorflow/tensorflow/pull/29673 (fetchpatch { @@ -121,7 +121,6 @@ let sha256 = "1n9ypbrx36fc1kc9cz5b3p9qhg15xxhq4nz6ap3hwqba535nakfz"; }) - (fetchpatch { # be compatible with gast >0.2 instead of only gast 0.2.2 name = "gast-update.patch"; @@ -132,7 +131,7 @@ let # cuda 10.2 does not have "-bin2c-path" option anymore # https://github.com/tensorflow/tensorflow/issues/34429 - ./cuda-10.2-no-bin2c-path.patch + ../cuda-10.2-no-bin2c-path.patch ]; # On update, it can be useful to steal the changes from gentoo @@ -373,7 +372,7 @@ in buildPythonPackage { numpy six protobuf - tensorflow-estimator_1_15_1 + tensorflow-estimator_1 termcolor wrapt grpcio @@ -385,7 +384,7 @@ in buildPythonPackage { ] ++ lib.optionals (pythonOlder "3.4") [ backports_weakref enum34 ] ++ lib.optionals withTensorboard [ - tensorflow-tensorboard + tensorflow-tensorboard_1 ]; nativeBuildInputs = lib.optional cudaSupport addOpenGLRunpath; diff --git a/pkgs/development/python-modules/tensorflow/lift-gast-restriction.patch b/pkgs/development/python-modules/tensorflow/1/lift-gast-restriction.patch index 30861d923417..30861d923417 100644 --- a/pkgs/development/python-modules/tensorflow/lift-gast-restriction.patch +++ b/pkgs/development/python-modules/tensorflow/1/lift-gast-restriction.patch diff --git a/pkgs/development/python-modules/tensorflow/1/prefetcher.sh b/pkgs/development/python-modules/tensorflow/1/prefetcher.sh new file mode 100755 index 000000000000..d590fb0f1732 --- /dev/null +++ b/pkgs/development/python-modules/tensorflow/1/prefetcher.sh @@ -0,0 +1,33 @@ +#!/usr/bin/env bash + +version=1.14.0 +hashfile=binary-hashes.nix +rm -f $hashfile +echo "{" >> $hashfile +echo "version = \"$version\";" >> $hashfile +for sys in "linux" "mac"; do + for tfpref in "cpu/tensorflow" "gpu/tensorflow_gpu"; do + for pykind in "py2-none-any" "py3-none-any" "cp27-none-linux_x86_64" "cp35-cp35m-linux_x86_64" "cp36-cp36m-linux_x86_64" "cp37-cp37m-linux_x86_64"; do + if [ $sys == "mac" ]; then + [[ $pykind =~ py.* ]] && [[ $tfpref =~ cpu.* ]] + result=$? + pyver=${pykind:2:1} + flavour=cpu + else + [[ $pykind =~ .*linux.* ]] + result=$? + pyver=${pykind:2:2} + flavour=${tfpref:0:3} + fi + if [ $result == 0 ]; then + url=https://storage.googleapis.com/tensorflow/$sys/$tfpref-$version-$pykind.whl + hash=$(nix-prefetch-url $url) + echo "${sys}_py_${pyver}_${flavour} = {" >> $hashfile + echo " url = \"$url\";" >> $hashfile + echo " sha256 = \"$hash\";" >> $hashfile + echo "};" >> $hashfile + fi + done + done +done +echo "}" >> $hashfile diff --git a/pkgs/development/python-modules/tensorflow/bin.nix b/pkgs/development/python-modules/tensorflow/2/bin.nix index e81dc2dbd002..95a7b2a37485 100644 --- a/pkgs/development/python-modules/tensorflow/bin.nix +++ b/pkgs/development/python-modules/tensorflow/2/bin.nix @@ -18,7 +18,7 @@ , wheel , opt-einsum , backports_weakref -, tensorflow-estimator +, tensorflow-estimator_2 , tensorflow-tensorboard , cudaSupport ? false , cudatoolkit ? null @@ -76,7 +76,7 @@ in buildPythonPackage { opt-einsum google-pasta wrapt - tensorflow-estimator + tensorflow-estimator_2 tensorflow-tensorboard keras-applications keras-preprocessing diff --git a/pkgs/development/python-modules/tensorflow/binary-hashes.nix b/pkgs/development/python-modules/tensorflow/2/binary-hashes.nix index 90848e93273f..90848e93273f 100644 --- a/pkgs/development/python-modules/tensorflow/binary-hashes.nix +++ b/pkgs/development/python-modules/tensorflow/2/binary-hashes.nix diff --git a/pkgs/development/python-modules/tensorflow/2/default.nix b/pkgs/development/python-modules/tensorflow/2/default.nix new file mode 100644 index 000000000000..294303230847 --- /dev/null +++ b/pkgs/development/python-modules/tensorflow/2/default.nix @@ -0,0 +1,421 @@ +{ stdenv, pkgs, bazel_0_29, buildBazelPackage, lib, fetchFromGitHub, fetchpatch, symlinkJoin +, addOpenGLRunpath +# Python deps +, buildPythonPackage, isPy3k, isPy27, pythonOlder, pythonAtLeast, python +# Python libraries +, numpy, tensorflow-tensorboard_2, backports_weakref, mock, enum34, absl-py +, future, setuptools, wheel, keras-preprocessing, keras-applications, google-pasta +, functools32 +, opt-einsum +, termcolor, grpcio, six, wrapt, protobuf, tensorflow-estimator_2 +# Common deps +, git, swig, which, binutils, glibcLocales, cython +# Common libraries +, jemalloc, openmpi, astor, gast, grpc, sqlite, openssl, jsoncpp, re2 +, curl, snappy, flatbuffers, icu, double-conversion, libpng, libjpeg, giflib +# Upsteam by default includes cuda support since tensorflow 1.15. We could do +# that in nix as well. It would make some things easier and less confusing, but +# it would also make the default tensorflow package unfree. See +# https://groups.google.com/a/tensorflow.org/forum/#!topic/developers/iRCt5m4qUz0 +, cudaSupport ? false, nvidia_x11 ? null, cudatoolkit ? null, cudnn ? null, nccl ? null +# XLA without CUDA is broken +, xlaSupport ? cudaSupport +# Default from ./configure script +, cudaCapabilities ? [ "3.5" "5.2" ] +, sse42Support ? builtins.elem (stdenv.hostPlatform.platform.gcc.arch or "default") ["westmere" "sandybridge" "ivybridge" "haswell" "broadwell" "skylake" "skylake-avx512"] +, avx2Support ? builtins.elem (stdenv.hostPlatform.platform.gcc.arch or "default") [ "haswell" "broadwell" "skylake" "skylake-avx512"] +, fmaSupport ? builtins.elem (stdenv.hostPlatform.platform.gcc.arch or "default") [ "haswell" "broadwell" "skylake" "skylake-avx512"] +# Darwin deps +, Foundation, Security +}: + +assert cudaSupport -> nvidia_x11 != null + && cudatoolkit != null + && cudnn != null; + +# unsupported combination +assert ! (stdenv.isDarwin && cudaSupport); + +let + withTensorboard = pythonOlder "3.6"; + + cudatoolkit_joined = symlinkJoin { + name = "${cudatoolkit.name}-merged"; + paths = [ + cudatoolkit.lib + cudatoolkit.out + # for some reason some of the required libs are in the targets/x86_64-linux + # directory; not sure why but this works around it + "${cudatoolkit}/targets/${stdenv.system}" + ]; + }; + + cudatoolkit_cc_joined = symlinkJoin { + name = "${cudatoolkit.cc.name}-merged"; + paths = [ + cudatoolkit.cc + binutils.bintools # for ar, dwp, nm, objcopy, objdump, strip + ]; + }; + + # Needed for _some_ system libraries, grep INCLUDEDIR. + includes_joined = symlinkJoin { + name = "tensorflow-deps-merged"; + paths = [ + pkgs.protobuf + jsoncpp + ]; + }; + + tfFeature = x: if x then "1" else "0"; + + version = "2.1.0"; + variant = if cudaSupport then "-gpu" else ""; + pname = "tensorflow${variant}"; + + pythonEnv = python.withPackages (_: + [ # python deps needed during wheel build time (not runtime, see the buildPythonPackage part for that) + numpy + keras-preprocessing + protobuf + wrapt + gast + astor + absl-py + termcolor + keras-applications + setuptools + wheel + ] ++ lib.optionals (!isPy3k) + [ future + functools32 + mock + ]); + + bazel-build = buildBazelPackage { + name = "${pname}-${version}"; + bazel = bazel_0_29; + + src = fetchFromGitHub { + owner = "tensorflow"; + repo = "tensorflow"; + rev = "v${version}"; + sha256 = "1g79xi8yl4sjia8ysk9b7xfzrz83zy28v5dlb2wzmcf0k5pmz60p"; + }; + + patches = [ + # Work around https://github.com/tensorflow/tensorflow/issues/24752 + ../no-saved-proto.patch + # Fixes for NixOS jsoncpp + ../system-jsoncpp.patch + + (fetchpatch { + name = "backport-pr-18950.patch"; + url = "https://github.com/tensorflow/tensorflow/commit/73640aaec2ab0234d9fff138e3c9833695570c0a.patch"; + sha256 = "1n9ypbrx36fc1kc9cz5b3p9qhg15xxhq4nz6ap3hwqba535nakfz"; + }) + + (fetchpatch { + # Don't try to fetch things that don't exist + name = "prune-missing-deps.patch"; + url = "https://github.com/tensorflow/tensorflow/commit/b39b1ed24b4814db27d2f748dc85c10730ae851d.patch"; + sha256 = "1skysz53nancvw1slij6s7flar2kv3gngnsq60ff4lap88kx5s6c"; + excludes = [ "tensorflow/cc/saved_model/BUILD" ]; + }) + + ./lift-gast-restriction.patch + + # cuda 10.2 does not have "-bin2c-path" option anymore + # https://github.com/tensorflow/tensorflow/issues/34429 + ../cuda-10.2-no-bin2c-path.patch + ]; + + # On update, it can be useful to steal the changes from gentoo + # https://gitweb.gentoo.org/repo/gentoo.git/tree/sci-libs/tensorflow + + nativeBuildInputs = [ + swig which pythonEnv + ] ++ lib.optional cudaSupport addOpenGLRunpath; + + buildInputs = [ + jemalloc + openmpi + glibcLocales + git + + # libs taken from system through the TF_SYS_LIBS mechanism + # grpc + sqlite + openssl + jsoncpp + pkgs.protobuf + curl + snappy + flatbuffers + icu + double-conversion + libpng + libjpeg + giflib + re2 + pkgs.lmdb + ] ++ lib.optionals cudaSupport [ + cudatoolkit + cudnn + nvidia_x11 + ] ++ lib.optionals stdenv.isDarwin [ + Foundation + Security + ]; + + # arbitrarily set to the current latest bazel version, overly careful + TF_IGNORE_MAX_BAZEL_VERSION = true; + + # Take as many libraries from the system as possible. Keep in sync with + # list of valid syslibs in + # https://github.com/tensorflow/tensorflow/blob/master/third_party/systemlibs/syslibs_configure.bzl + TF_SYSTEM_LIBS = lib.concatStringsSep "," [ + "absl_py" + "astor_archive" + "boringssl" + # Not packaged in nixpkgs + # "com_github_googleapis_googleapis" + # "com_github_googlecloudplatform_google_cloud_cpp" + "com_google_protobuf" + "com_googlesource_code_re2" + "curl" + "cython" + "double_conversion" + "flatbuffers" + "gast_archive" + # Lots of errors, requires an older version + # "grpc" + "hwloc" + "icu" + "jpeg" + "jsoncpp_git" + "keras_applications_archive" + "lmdb" + "nasm" + # "nsync" # not packaged in nixpkgs + "opt_einsum_archive" + "org_sqlite" + "pasta" + "pcre" + "six_archive" + "snappy" + "swig" + "termcolor_archive" + "wrapt" + "zlib_archive" + ]; + + INCLUDEDIR = "${includes_joined}/include"; + + PYTHON_BIN_PATH = pythonEnv.interpreter; + + TF_NEED_GCP = true; + TF_NEED_HDFS = true; + TF_ENABLE_XLA = tfFeature xlaSupport; + + CC_OPT_FLAGS = " "; + + # https://github.com/tensorflow/tensorflow/issues/14454 + TF_NEED_MPI = tfFeature cudaSupport; + + TF_NEED_CUDA = tfFeature cudaSupport; + TF_CUDA_PATHS = lib.optionalString cudaSupport "${cudatoolkit_joined},${cudnn},${nccl}"; + GCC_HOST_COMPILER_PREFIX = lib.optionalString cudaSupport "${cudatoolkit_cc_joined}/bin"; + GCC_HOST_COMPILER_PATH = lib.optionalString cudaSupport "${cudatoolkit_cc_joined}/bin/gcc"; + TF_CUDA_COMPUTE_CAPABILITIES = lib.concatStringsSep "," cudaCapabilities; + + postPatch = '' + # https://github.com/tensorflow/tensorflow/issues/20919 + sed -i '/androidndk/d' tensorflow/lite/kernels/internal/BUILD + + # Tensorboard pulls in a bunch of dependencies, some of which may + # include security vulnerabilities. So we make it optional. + # https://github.com/tensorflow/tensorflow/issues/20280#issuecomment-400230560 + sed -i '/tensorboard >=/d' tensorflow/tools/pip_package/setup.py + ''; + + preConfigure = let + opt_flags = [] + ++ lib.optionals sse42Support ["-msse4.2"] + ++ lib.optionals avx2Support ["-mavx2"] + ++ lib.optionals fmaSupport ["-mfma"]; + in '' + patchShebangs configure + + # dummy ldconfig + mkdir dummy-ldconfig + echo "#!${stdenv.shell}" > dummy-ldconfig/ldconfig + chmod +x dummy-ldconfig/ldconfig + export PATH="$PWD/dummy-ldconfig:$PATH" + + export PYTHON_LIB_PATH="$NIX_BUILD_TOP/site-packages" + export CC_OPT_FLAGS="${lib.concatStringsSep " " opt_flags}" + mkdir -p "$PYTHON_LIB_PATH" + + # To avoid mixing Python 2 and Python 3 + unset PYTHONPATH + ''; + + configurePhase = '' + runHook preConfigure + ./configure + runHook postConfigure + ''; + + # FIXME: Tensorflow uses dlopen() for CUDA libraries. + NIX_LDFLAGS = lib.optionalString cudaSupport "-lcudart -lcublas -lcufft -lcurand -lcusolver -lcusparse -lcudnn"; + + hardeningDisable = [ "format" ]; + + bazelFlags = [ + # temporary fixes to make the build work with bazel 0.27 + "--incompatible_no_support_tools_in_action_inputs=false" + ]; + bazelBuildFlags = [ + "--config=opt" # optimize using the flags set in the configure phase + ]; + + bazelTarget = "//tensorflow/tools/pip_package:build_pip_package //tensorflow/tools/lib_package:libtensorflow"; + + fetchAttrs = { + # So that checksums don't depend on these. + TF_SYSTEM_LIBS = null; + + # cudaSupport causes fetch of ncclArchive, resulting in different hashes + sha256 = if cudaSupport then + "0hg3ysy644950a34j28hrb317cz8gcbb9n84d36wdailvnlshghb" + else + "1gy4pz9kn30wb9c4a9584fibb88c3h38y3dqa99yw1lbsbyyi28c"; + }; + + buildAttrs = { + outputs = [ "out" "python" ]; + + preBuild = '' + patchShebangs . + ''; + + installPhase = '' + mkdir -p "$out" + tar -xf bazel-bin/tensorflow/tools/lib_package/libtensorflow.tar.gz -C "$out" + # Write pkgconfig file. + mkdir "$out/lib/pkgconfig" + cat > "$out/lib/pkgconfig/tensorflow.pc" << EOF + Name: TensorFlow + Version: ${version} + Description: Library for computation using data flow graphs for scalable machine learning + Requires: + Libs: -L$out/lib -ltensorflow + Cflags: -I$out/include/tensorflow + EOF + + # build the source code, then copy it to $python (build_pip_package + # actually builds a symlink farm so we must dereference them). + bazel-bin/tensorflow/tools/pip_package/build_pip_package --src "$PWD/dist" + cp -Lr "$PWD/dist" "$python" + ''; + + postFixup = lib.optionalString cudaSupport '' + find $out -type f \( -name '*.so' -or -name '*.so.*' \) | while read lib; do + addOpenGLRunpath "$lib" + done + ''; + }; + + meta = with stdenv.lib; { + description = "Computation using data flow graphs for scalable machine learning"; + homepage = http://tensorflow.org; + license = licenses.asl20; + maintainers = with maintainers; [ jyp abbradar ]; + platforms = with platforms; linux ++ darwin; + # The py2 build fails due to some issue importing protobuf. Possibly related to the fix in + # https://github.com/akesandgren/easybuild-easyblocks/commit/1f2e517ddfd1b00a342c6abb55aef3fd93671a2b + broken = !(xlaSupport -> cudaSupport) || !isPy3k; + }; + }; + +in buildPythonPackage { + inherit version pname; + disabled = isPy27 || (pythonAtLeast "3.8"); + + src = bazel-build.python; + + # Upstream has a pip hack that results in bin/tensorboard being in both tensorflow + # and the propagated input tensorflow-tensorboard, which causes environment collisions. + # Another possibility would be to have tensorboard only in the buildInputs + # https://github.com/tensorflow/tensorflow/blob/v1.7.1/tensorflow/tools/pip_package/setup.py#L79 + postInstall = '' + rm $out/bin/tensorboard + ''; + + setupPyGlobalFlags = [ "--project_name ${pname}" ]; + + # tensorflow/tools/pip_package/setup.py + propagatedBuildInputs = [ + absl-py + astor + gast + google-pasta + keras-applications + keras-preprocessing + numpy + six + protobuf + tensorflow-estimator_2 + termcolor + wrapt + grpcio + opt-einsum + ] ++ lib.optionals (!isPy3k) [ + mock + future + functools32 + ] ++ lib.optionals (pythonOlder "3.4") [ + backports_weakref enum34 + ] ++ lib.optionals withTensorboard [ + tensorflow-tensorboard_2 + ]; + + nativeBuildInputs = lib.optional cudaSupport addOpenGLRunpath; + + postFixup = lib.optionalString cudaSupport '' + find $out -type f \( -name '*.so' -or -name '*.so.*' \) | while read lib; do + addOpenGLRunpath "$lib" + done + ''; + + # Actual tests are slow and impure. + # TODO try to run them anyway + # TODO better test (files in tensorflow/tools/ci_build/builds/*test) + checkPhase = '' + ${python.interpreter} <<EOF + # A simple "Hello world" + import tensorflow as tf + hello = tf.constant("Hello, world!") + tf.print(hello) + + # Fit a simple model to random data + import numpy as np + np.random.seed(0) + tf.random.set_seed(0) + model = tf.keras.models.Sequential([ + tf.keras.layers.Dense(1, activation="linear") + ]) + model.compile(optimizer="sgd", loss="mse") + + x = np.random.uniform(size=(1,1)) + y = np.random.uniform(size=(1,)) + model.fit(x, y, epochs=1) + EOF + ''; + # Regression test for #77626 removed because not more `tensorflow.contrib`. + + passthru.libtensorflow = bazel-build.out; + + inherit (bazel-build) meta; +} diff --git a/pkgs/development/python-modules/tensorflow/2/lift-gast-restriction.patch b/pkgs/development/python-modules/tensorflow/2/lift-gast-restriction.patch new file mode 100644 index 000000000000..e0d367f4924f --- /dev/null +++ b/pkgs/development/python-modules/tensorflow/2/lift-gast-restriction.patch @@ -0,0 +1,11 @@ +diff --git a/tensorflow/tools/pip_package/setup.py b/tensorflow/tools/pip_package/setup.py +index 992f2eae22..d9386f9b13 100644 +--- a/tensorflow/tools/pip_package/setup.py ++++ b/tensorflow/tools/pip_package/setup.py +@@ -54,5 +54,5 @@ REQUIRED_PACKAGES = [ + 'enum34 >= 1.1.6;python_version<"3.4"', +- 'gast == 0.2.2', ++ 'gast >= 0.2.2', + 'google_pasta >= 0.1.6', + 'keras_applications >= 1.0.8', + 'keras_preprocessing >= 1.0.5', diff --git a/pkgs/development/python-modules/tensorflow/prefetcher.sh b/pkgs/development/python-modules/tensorflow/2/prefetcher.sh index abb0faac2834..abb0faac2834 100755 --- a/pkgs/development/python-modules/tensorflow/prefetcher.sh +++ b/pkgs/development/python-modules/tensorflow/2/prefetcher.sh diff --git a/pkgs/development/tools/build-managers/bazel/bazel_0/default.nix b/pkgs/development/tools/build-managers/bazel/bazel_0_26/default.nix index f54868de533c..f54868de533c 100644 --- a/pkgs/development/tools/build-managers/bazel/bazel_0/default.nix +++ b/pkgs/development/tools/build-managers/bazel/bazel_0_26/default.nix diff --git a/pkgs/development/tools/build-managers/bazel/bazel_0/glibc.patch b/pkgs/development/tools/build-managers/bazel/bazel_0_26/glibc.patch index c4de48068f11..c4de48068f11 100644 --- a/pkgs/development/tools/build-managers/bazel/bazel_0/glibc.patch +++ b/pkgs/development/tools/build-managers/bazel/bazel_0_26/glibc.patch diff --git a/pkgs/development/tools/build-managers/bazel/bazel_0/python-stub-path-fix.patch b/pkgs/development/tools/build-managers/bazel/bazel_0_26/python-stub-path-fix.patch index cbc4192d2d9b..cbc4192d2d9b 100644 --- a/pkgs/development/tools/build-managers/bazel/bazel_0/python-stub-path-fix.patch +++ b/pkgs/development/tools/build-managers/bazel/bazel_0_26/python-stub-path-fix.patch diff --git a/pkgs/development/tools/build-managers/bazel/bazel_0_29/default.nix b/pkgs/development/tools/build-managers/bazel/bazel_0_29/default.nix new file mode 100644 index 000000000000..68adddebb0ac --- /dev/null +++ b/pkgs/development/tools/build-managers/bazel/bazel_0_29/default.nix @@ -0,0 +1,559 @@ +{ stdenv, callPackage, lib, fetchurl, fetchFromGitHub +, runCommand, runCommandCC, makeWrapper, recurseIntoAttrs +# this package (through the fixpoint glass) +, bazel_1 +, lr, xe, zip, unzip, bash, writeCBin, coreutils +, which, gawk, gnused, gnutar, gnugrep, gzip, findutils +# updater +, python27, python3, writeScript +# Apple dependencies +, cctools, libcxx, CoreFoundation, CoreServices, Foundation +# Allow to independently override the jdks used to build and run respectively +, buildJdk, runJdk +, buildJdkName +, runtimeShell +# Downstream packages for tests +, bazel-watcher +# Always assume all markers valid (this is needed because we remove markers; they are non-deterministic). +# Also, don't clean up environment variables (so that NIX_ environment variables are passed to compilers). +, enableNixHacks ? false +, gcc-unwrapped +, autoPatchelfHook +, file +, substituteAll +, writeTextFile +}: + +let + version = "0.29.1"; + + src = fetchurl { + url = "https://github.com/bazelbuild/bazel/releases/download/${version}/bazel-${version}-dist.zip"; + sha256 = "1rcd6xy61n07n7m6dgcw23275r8z3gkwmqdkd48nwrq8yb7m4al7"; + }; + + # Update with `eval $(nix-build -A bazel.updater)`, + # then add new dependencies from the dict in ./src-deps.json as required. + srcDeps = lib.attrsets.attrValues srcDepsSet; + srcDepsSet = + let + srcs = (builtins.fromJSON (builtins.readFile ./src-deps.json)); + toFetchurl = d: lib.attrsets.nameValuePair d.name (fetchurl { + urls = d.urls; + sha256 = d.sha256; + }); + in builtins.listToAttrs (map toFetchurl [ + srcs.desugar_jdk_libs + srcs.io_bazel_skydoc + srcs.bazel_skylib + srcs.io_bazel_rules_sass + srcs.platforms + (if stdenv.hostPlatform.isDarwin + then srcs."java_tools_javac11_darwin-v4.0.zip" + else srcs."java_tools_javac11_linux-v4.0.zip") + srcs."coverage_output_generator-v1.0.zip" + srcs.build_bazel_rules_nodejs + srcs."android_tools_pkg-0.8.tar.gz" + srcs."0.27.1.tar.gz" + srcs.rules_pkg + srcs.rules_cc + srcs.rules_java + srcs.rules_proto + ]); + + distDir = runCommand "bazel-deps" {} '' + mkdir -p $out + for i in ${builtins.toString srcDeps}; do cp $i $out/$(stripHash $i); done + ''; + + defaultShellPath = lib.makeBinPath + # Keep this list conservative. For more exotic tools, prefer to use + # @rules_nixpkgs to pull in tools from the nix repository. Example: + # + # WORKSPACE: + # + # nixpkgs_git_repository( + # name = "nixpkgs", + # revision = "def5124ec8367efdba95a99523dd06d918cb0ae8", + # ) + # + # # This defines an external Bazel workspace. + # nixpkgs_package( + # name = "bison", + # repositories = { "nixpkgs": "@nixpkgs//:default.nix" }, + # ) + # + # some/BUILD.bazel: + # + # genrule( + # ... + # cmd = "$(location @bison//:bin/bison) -other -args", + # tools = [ + # ... + # "@bison//:bin/bison", + # ], + # ) + # + [ bash coreutils findutils gawk gnugrep gnutar gnused gzip which unzip file zip ]; + + # Java toolchain used for the build and tests + javaToolchain = "@bazel_tools//tools/jdk:toolchain_host${buildJdkName}"; + + platforms = lib.platforms.linux ++ lib.platforms.darwin; + + # This repository is fetched by bazel at runtime + # however it contains prebuilt java binaries, with wrong interpreter + # and libraries path. + # We prefetch it, patch it, and override it in a global bazelrc. + system = if stdenv.hostPlatform.isDarwin then "darwin" else "linux"; + + remote_java_tools = stdenv.mkDerivation { + name = "remote_java_tools_${system}"; + + src = srcDepsSet."java_tools_javac11_${system}-v4.0.zip"; + + nativeBuildInputs = [ autoPatchelfHook unzip ]; + buildInputs = [ gcc-unwrapped ]; + + sourceRoot = "."; + + buildPhase = '' + mkdir $out; + ''; + + installPhase = '' + cp -Ra * $out/ + touch $out/WORKSPACE + ''; + }; + + bazelRC = writeTextFile { + name = "bazel-rc"; + text = '' + build --override_repository=${remote_java_tools.name}=${remote_java_tools} + build --distdir=${distDir} + startup --server_javabase=${runJdk} + + # load default location for the system wide configuration + try-import /etc/bazel.bazelrc + ''; + }; + +in +stdenv.mkDerivation rec { + pname = "bazel"; + inherit version; + + meta = with lib; { + homepage = "https://github.com/bazelbuild/bazel/"; + description = "Build tool that builds code quickly and reliably"; + license = licenses.asl20; + maintainers = [ maintainers.mboes ]; + inherit platforms; + }; + + inherit src; + sourceRoot = "."; + + patches = [ + # On Darwin, the last argument to gcc is coming up as an empty string. i.e: '' + # This is breaking the build of any C target. This patch removes the last + # argument if it's found to be an empty string. + ../trim-last-argument-to-gcc-if-empty.patch + ./glibc.patch + + # --experimental_strict_action_env (which may one day become the default + # see bazelbuild/bazel#2574) hardcodes the default + # action environment to a non hermetic value (e.g. "/usr/local/bin"). + # This is non hermetic on non-nixos systems. On NixOS, bazel cannot find the required binaries. + # So we are replacing this bazel paths by defaultShellPath, + # improving hermeticity and making it work in nixos. + (substituteAll { + src = ../strict_action_env.patch; + strictActionEnvPatch = defaultShellPath; + }) + + # bazel reads its system bazelrc in /etc + # override this path to a builtin one + (substituteAll { + src = ../bazel_rc.patch; + bazelSystemBazelRCPath = bazelRC; + }) + ] ++ lib.optional enableNixHacks ../nix-hacks.patch; + + + # Additional tests that check bazel’s functionality. Execute + # + # nix-build . -A bazel.tests + # + # in the nixpkgs checkout root to exercise them locally. + passthru.tests = + let + runLocal = name: attrs: script: + let + attrs' = removeAttrs attrs [ "buildInputs" ]; + buildInputs = [ python3 ] ++ (attrs.buildInputs or []); + in + runCommandCC name ({ + inherit buildInputs; + preferLocalBuild = true; + meta.platforms = platforms; + } // attrs') script; + + # bazel wants to extract itself into $install_dir/install every time it runs, + # so let’s do that only once. + extracted = bazelPkg: + let install_dir = + # `install_base` field printed by `bazel info`, minus the hash. + # yes, this path is kinda magic. Sorry. + "$HOME/.cache/bazel/_bazel_nixbld"; + in runLocal "bazel-extracted-homedir" { passthru.install_dir = install_dir; } '' + export HOME=$(mktemp -d) + touch WORKSPACE # yeah, everything sucks + install_base="$(${bazelPkg}/bin/bazel info | grep install_base)" + # assert it’s actually below install_dir + [[ "$install_base" =~ ${install_dir} ]] \ + || (echo "oh no! $install_base but we are \ + trying to copy ${install_dir} to $out instead!"; exit 1) + cp -R ${install_dir} $out + ''; + + bazelTest = { name, bazelScript, workspaceDir, bazelPkg, buildInputs ? [] }: + let + be = extracted bazelPkg; + in runLocal name { inherit buildInputs; } ( + # skip extraction caching on Darwin, because nobody knows how Darwin works + (lib.optionalString (!stdenv.hostPlatform.isDarwin) '' + # set up home with pre-unpacked bazel + export HOME=$(mktemp -d) + mkdir -p ${be.install_dir} + cp -R ${be}/install ${be.install_dir} + + # https://stackoverflow.com/questions/47775668/bazel-how-to-skip-corrupt-installation-on-centos6 + # Bazel checks whether the mtime of the install dir files + # is >9 years in the future, otherwise it extracts itself again. + # see PosixFileMTime::IsUntampered in src/main/cpp/util + # What the hell bazel. + ${lr}/bin/lr -0 -U ${be.install_dir} | ${xe}/bin/xe -N0 -0 touch --date="9 years 6 months" {} + '') + + + '' + # Note https://github.com/bazelbuild/bazel/issues/5763#issuecomment-456374609 + # about why to create a subdir for the workspace. + cp -r ${workspaceDir} wd && chmod u+w wd && cd wd + + ${bazelScript} + + touch $out + ''); + + bazelWithNixHacks = bazel_1.override { enableNixHacks = true; }; + + bazel-examples = fetchFromGitHub { + owner = "bazelbuild"; + repo = "examples"; + rev = "5d8c8961a2516ebf875787df35e98cadd08d43dc"; + sha256 = "03c1bwlq5bs3hg96v4g4pg2vqwhqq6w538h66rcpw02f83yy7fs8"; + }; + + in (if !stdenv.hostPlatform.isDarwin then { + # `extracted` doesn’t work on darwin + shebang = callPackage ./shebang-test.nix { inherit runLocal extracted bazelTest distDir; }; + } else {}) // { + bashTools = callPackage ./bash-tools-test.nix { inherit runLocal bazelTest distDir; }; + cpp = callPackage ./cpp-test.nix { inherit runLocal bazelTest bazel-examples distDir; }; + java = callPackage ./java-test.nix { inherit runLocal bazelTest bazel-examples distDir; }; + protobuf = callPackage ./protobuf-test.nix { inherit runLocal bazelTest distDir; }; + pythonBinPath = callPackage ./python-bin-path-test.nix { inherit runLocal bazelTest distDir; }; + + bashToolsWithNixHacks = callPackage ./bash-tools-test.nix { inherit runLocal bazelTest distDir; bazel = bazelWithNixHacks; }; + + cppWithNixHacks = callPackage ./cpp-test.nix { inherit runLocal bazelTest bazel-examples distDir; bazel = bazelWithNixHacks; }; + javaWithNixHacks = callPackage ./java-test.nix { inherit runLocal bazelTest bazel-examples distDir; bazel = bazelWithNixHacks; }; + protobufWithNixHacks = callPackage ./protobuf-test.nix { inherit runLocal bazelTest distDir; bazel = bazelWithNixHacks; }; + pythonBinPathWithNixHacks = callPackage ./python-bin-path-test.nix { inherit runLocal bazelTest distDir; bazel = bazelWithNixHacks; }; + + # downstream packages using buildBazelPackage + # fixed-output hashes of the fetch phase need to be spot-checked manually + downstream = recurseIntoAttrs ({ + inherit bazel-watcher; + } + # dm-sonnet is only packaged for linux + // (lib.optionalAttrs stdenv.isLinux { + # TODO(timokau) dm-sonnet is broken currently + # dm-sonnet-linux = python3.pkgs.dm-sonnet; + })); + }; + + # update the list of workspace dependencies + passthru.updater = writeScript "update-bazel-deps.sh" '' + #!${runtimeShell} + cat ${runCommand "bazel-deps.json" {} '' + ${unzip}/bin/unzip ${src} WORKSPACE + ${python3}/bin/python3 ${../update-srcDeps.py} ./WORKSPACE > $out + ''} > ${builtins.toString ./src-deps.json} + ''; + + # Necessary for the tests to pass on Darwin with sandbox enabled. + # Bazel starts a local server and needs to bind a local address. + __darwinAllowLocalNetworking = true; + + # Bazel expects several utils to be available in Bash even without PATH. Hence this hack. + customBash = writeCBin "bash" '' + #include <stdio.h> + #include <stdlib.h> + #include <string.h> + #include <unistd.h> + + extern char **environ; + + int main(int argc, char *argv[]) { + char *path = getenv("PATH"); + char *pathToAppend = "${defaultShellPath}"; + char *newPath; + if (path != NULL) { + int length = strlen(path) + 1 + strlen(pathToAppend) + 1; + newPath = malloc(length * sizeof(char)); + snprintf(newPath, length, "%s:%s", path, pathToAppend); + } else { + newPath = pathToAppend; + } + setenv("PATH", newPath, 1); + execve("${bash}/bin/bash", argv, environ); + return 0; + } + ''; + + postPatch = let + + darwinPatches = '' + bazelLinkFlags () { + eval set -- "$NIX_LDFLAGS" + local flag + for flag in "$@"; do + printf ' -Wl,%s' "$flag" + done + } + + # Disable Bazel's Xcode toolchain detection which would configure compilers + # and linkers from Xcode instead of from PATH + export BAZEL_USE_CPP_ONLY_TOOLCHAIN=1 + + # Explicitly configure gcov since we don't have it on Darwin, so autodetection fails + export GCOV=${coreutils}/bin/false + + # Framework search paths aren't added by bintools hook + # https://github.com/NixOS/nixpkgs/pull/41914 + export NIX_LDFLAGS+=" -F${CoreFoundation}/Library/Frameworks -F${CoreServices}/Library/Frameworks -F${Foundation}/Library/Frameworks" + + # libcxx includes aren't added by libcxx hook + # https://github.com/NixOS/nixpkgs/pull/41589 + export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -isystem ${libcxx}/include/c++/v1" + + # don't use system installed Xcode to run clang, use Nix clang instead + sed -i -E "s;/usr/bin/xcrun (--sdk macosx )?clang;${stdenv.cc}/bin/clang $NIX_CFLAGS_COMPILE $(bazelLinkFlags) -framework CoreFoundation;g" \ + scripts/bootstrap/compile.sh \ + src/tools/xcode/realpath/BUILD \ + src/tools/xcode/stdredirect/BUILD \ + tools/osx/BUILD + + # nixpkgs's libSystem cannot use pthread headers directly, must import GCD headers instead + sed -i -e "/#include <pthread\/spawn.h>/i #include <dispatch/dispatch.h>" src/main/cpp/blaze_util_darwin.cc + + # clang installed from Xcode has a compatibility wrapper that forwards + # invocations of gcc to clang, but vanilla clang doesn't + sed -i -e 's;_find_generic(repository_ctx, "gcc", "CC", overriden_tools);_find_generic(repository_ctx, "clang", "CC", overriden_tools);g' tools/cpp/unix_cc_configure.bzl + + sed -i -e 's;/usr/bin/libtool;${cctools}/bin/libtool;g' tools/cpp/unix_cc_configure.bzl + wrappers=( tools/cpp/osx_cc_wrapper.sh tools/cpp/osx_cc_wrapper.sh.tpl ) + for wrapper in "''${wrappers[@]}"; do + sed -i -e "s,/usr/bin/install_name_tool,${cctools}/bin/install_name_tool,g" $wrapper + done + ''; + + genericPatches = '' + # Substitute j2objc and objc wrapper's python shebang to plain python path. + # These scripts explicitly depend on Python 2.7, hence we use python27. + # See also `postFixup` where python27 is added to $out/nix-support + substituteInPlace tools/j2objc/j2objc_header_map.py --replace "$!/usr/bin/python2.7" "#!${python27}/bin/python" + substituteInPlace tools/j2objc/j2objc_wrapper.py --replace "$!/usr/bin/python2.7" "#!${python27}/bin/python" + substituteInPlace tools/objc/j2objc_dead_code_pruner.py --replace "$!/usr/bin/python2.7" "#!${python27}/bin/python" + + # md5sum is part of coreutils + sed -i 's|/sbin/md5|md5sum|' \ + src/BUILD + + # substituteInPlace is rather slow, so prefilter the files with grep + grep -rlZ /bin src/main/java/com/google/devtools | while IFS="" read -r -d "" path; do + # If you add more replacements here, you must change the grep above! + # Only files containing /bin are taken into account. + # We default to python3 where possible. See also `postFixup` where + # python3 is added to $out/nix-support + substituteInPlace "$path" \ + --replace /bin/bash ${customBash}/bin/bash \ + --replace "/usr/bin/env bash" ${customBash}/bin/bash \ + --replace "/usr/bin/env python" ${python3}/bin/python \ + --replace /usr/bin/env ${coreutils}/bin/env \ + --replace /bin/true ${coreutils}/bin/true + done + + # bazel test runner include references to /bin/bash + substituteInPlace tools/build_rules/test_rules.bzl \ + --replace /bin/bash ${customBash}/bin/bash + + for i in $(find tools/cpp/ -type f) + do + substituteInPlace $i \ + --replace /bin/bash ${customBash}/bin/bash + done + + # Fixup scripts that generate scripts. Not fixed up by patchShebangs below. + substituteInPlace scripts/bootstrap/compile.sh \ + --replace /bin/bash ${customBash}/bin/bash + + # add nix environment vars to .bazelrc + cat >> .bazelrc <<EOF + build --distdir=${distDir} + fetch --distdir=${distDir} + build --copt="$(echo $NIX_CFLAGS_COMPILE | sed -e 's/ /" --copt="/g')" + build --host_copt="$(echo $NIX_CFLAGS_COMPILE | sed -e 's/ /" --host_copt="/g')" + build --linkopt="-Wl,$(echo $NIX_LDFLAGS | sed -e 's/ /" --linkopt="-Wl,/g')" + build --host_linkopt="-Wl,$(echo $NIX_LDFLAGS | sed -e 's/ /" --host_linkopt="-Wl,/g')" + build --host_javabase='@local_jdk//:jdk' + build --host_java_toolchain='${javaToolchain}' + EOF + + # add the same environment vars to compile.sh + sed -e "/\$command \\\\$/a --copt=\"$(echo $NIX_CFLAGS_COMPILE | sed -e 's/ /" --copt=\"/g')\" \\\\" \ + -e "/\$command \\\\$/a --host_copt=\"$(echo $NIX_CFLAGS_COMPILE | sed -e 's/ /" --host_copt=\"/g')\" \\\\" \ + -e "/\$command \\\\$/a --linkopt=\"-Wl,$(echo $NIX_LDFLAGS | sed -e 's/ /" --linkopt=\"-Wl,/g')\" \\\\" \ + -e "/\$command \\\\$/a --host_linkopt=\"-Wl,$(echo $NIX_LDFLAGS | sed -e 's/ /" --host_linkopt=\"-Wl,/g')\" \\\\" \ + -e "/\$command \\\\$/a --host_javabase='@local_jdk//:jdk' \\\\" \ + -e "/\$command \\\\$/a --host_java_toolchain='${javaToolchain}' \\\\" \ + -i scripts/bootstrap/compile.sh + + # This is necessary to avoid: + # "error: no visible @interface for 'NSDictionary' declares the selector + # 'initWithContentsOfURL:error:'" + # This can be removed when the apple_sdk is upgraded beyond 10.13+ + sed -i '/initWithContentsOfURL:versionPlistUrl/ { + N + s/error:nil\];/\];/ + }' tools/osx/xcode_locator.m + + # append the PATH with defaultShellPath in tools/bash/runfiles/runfiles.bash + echo "PATH=\$PATH:${defaultShellPath}" >> runfiles.bash.tmp + cat tools/bash/runfiles/runfiles.bash >> runfiles.bash.tmp + mv runfiles.bash.tmp tools/bash/runfiles/runfiles.bash + + patchShebangs . + ''; + in lib.optionalString stdenv.hostPlatform.isDarwin darwinPatches + + genericPatches; + + buildInputs = [ + buildJdk + python3 + ]; + + # when a command can’t be found in a bazel build, you might also + # need to add it to `defaultShellPath`. + nativeBuildInputs = [ + zip + python3 + unzip + makeWrapper + which + customBash + ] ++ lib.optionals (stdenv.isDarwin) [ cctools libcxx CoreFoundation CoreServices Foundation ]; + + # Bazel makes extensive use of symlinks in the WORKSPACE. + # This causes problems with infinite symlinks if the build output is in the same location as the + # Bazel WORKSPACE. This is why before executing the build, the source code is moved into a + # subdirectory. + # Failing to do this causes "infinite symlink expansion detected" + preBuildPhases = ["preBuildPhase"]; + preBuildPhase = '' + mkdir bazel_src + shopt -s dotglob extglob + mv !(bazel_src) bazel_src + ''; + + buildPhase = '' + # Increasing memory during compilation might be necessary. + # export BAZEL_JAVAC_OPTS="-J-Xmx2g -J-Xms200m" + ./bazel_src/compile.sh + ./bazel_src/scripts/generate_bash_completion.sh \ + --bazel=./bazel_src/output/bazel \ + --output=./bazel_src/output/bazel-complete.bash \ + --prepend=./bazel_src/scripts/bazel-complete-header.bash \ + --prepend=./bazel_src/scripts/bazel-complete-template.bash + ''; + + installPhase = '' + mkdir -p $out/bin + + # official wrapper scripts that searches for $WORKSPACE_ROOT/tools/bazel + # if it can’t find something in tools, it calls $out/bin/bazel-real + cp ./bazel_src/scripts/packages/bazel.sh $out/bin/bazel + mv ./bazel_src/output/bazel $out/bin/bazel-real + + # shell completion files + mkdir -p $out/share/bash-completion/completions $out/share/zsh/site-functions + mv ./bazel_src/output/bazel-complete.bash $out/share/bash-completion/completions/bazel + cp ./bazel_src/scripts/zsh_completion/_bazel $out/share/zsh/site-functions/ + ''; + + doInstallCheck = true; + installCheckPhase = '' + export TEST_TMPDIR=$(pwd) + + hello_test () { + $out/bin/bazel test --distdir=${distDir} \ + --test_output=errors \ + --java_toolchain='${javaToolchain}' \ + examples/cpp:hello-success_test \ + examples/java-native/src/test/java/com/example/myproject:hello + } + + cd ./bazel_src + + # test whether $WORKSPACE_ROOT/tools/bazel works + + mkdir -p tools + cat > tools/bazel <<"EOF" + #!${runtimeShell} -e + exit 1 + EOF + chmod +x tools/bazel + + # first call should fail if tools/bazel is used + ! hello_test + + cat > tools/bazel <<"EOF" + #!${runtimeShell} -e + exec "$BAZEL_REAL" "$@" + EOF + + # second call succeeds because it defers to $out/bin/bazel-real + hello_test + ''; + + # Save paths to hardcoded dependencies so Nix can detect them. + postFixup = '' + mkdir -p $out/nix-support + echo "${customBash} ${defaultShellPath}" >> $out/nix-support/depends + # The templates get tar’d up into a .jar, + # so nix can’t detect python is needed in the runtime closure + # Some of the scripts explicitly depend on Python 2.7. Otherwise, we + # default to using python3. Therefore, both python27 and python3 are + # runtime dependencies. + echo "${python27}" >> $out/nix-support/depends + echo "${python3}" >> $out/nix-support/depends + '' + lib.optionalString stdenv.isDarwin '' + echo "${cctools}" >> $out/nix-support/depends + ''; + + dontStrip = true; + dontPatchELF = true; +} diff --git a/pkgs/development/tools/build-managers/bazel/bazel_0_29/glibc.patch b/pkgs/development/tools/build-managers/bazel/bazel_0_29/glibc.patch new file mode 100644 index 000000000000..c4de48068f11 --- /dev/null +++ b/pkgs/development/tools/build-managers/bazel/bazel_0_29/glibc.patch @@ -0,0 +1,78 @@ +From https://github.com/grpc/grpc/commit/57586a1ca7f17b1916aed3dea4ff8de872dbf853 +From: Benjamin Peterson <benjamin@dropbox.com> +Date: Fri, 3 May 2019 08:11:00 -0700 +Subject: [PATCH] Rename gettid() functions. + +glibc 2.30 will declare its own gettid; see https://sourceware.org/git/?p=glibc.git;a=commit;h=1d0fc213824eaa2a8f8c4385daaa698ee8fb7c92. Rename the grpc versions to avoid naming conflicts. +--- + src/core/lib/gpr/log_linux.cc | 6 ++---- + src/core/lib/gpr/log_posix.cc | 4 ++-- + src/core/lib/iomgr/ev_epollex_linux.cc | 4 ++-- + 3 files changed, 6 insertions(+), 8 deletions(-) + +diff --git a/third_party/grpc/src/core/lib/gpr/log_linux.cc b/src/core/lib/gpr/log_linux.cc +index 81026e5689b..8b597b4cf2f 100644 +--- a/third_party/grpc/src/core/lib/gpr/log_linux.cc ++++ b/third_party/grpc/src/core/lib/gpr/log_linux.cc +@@ -40,7 +40,7 @@ + #include <time.h> + #include <unistd.h> + +-static long gettid(void) { return syscall(__NR_gettid); } ++static long sys_gettid(void) { return syscall(__NR_gettid); } + + void gpr_log(const char* file, int line, gpr_log_severity severity, + const char* format, ...) { +@@ -70,7 +70,7 @@ void gpr_default_log(gpr_log_func_args* args) { + gpr_timespec now = gpr_now(GPR_CLOCK_REALTIME); + struct tm tm; + static __thread long tid = 0; +- if (tid == 0) tid = gettid(); ++ if (tid == 0) tid = sys_gettid(); + + timer = static_cast<time_t>(now.tv_sec); + final_slash = strrchr(args->file, '/'); +diff --git a/third_party/grpc/src/core/lib/gpr/log_posix.cc b/src/core/lib/gpr/log_posix.cc +index b6edc14ab6b..2f7c6ce3760 100644 +--- a/third_party/grpc/src/core/lib/gpr/log_posix.cc ++++ b/third_party/grpc/src/core/lib/gpr/log_posix.cc +@@ -31,7 +31,7 @@ + #include <string.h> + #include <time.h> + +-static intptr_t gettid(void) { return (intptr_t)pthread_self(); } ++static intptr_t sys_gettid(void) { return (intptr_t)pthread_self(); } + + void gpr_log(const char* file, int line, gpr_log_severity severity, + const char* format, ...) { +@@ -86,7 +86,7 @@ void gpr_default_log(gpr_log_func_args* args) { + char* prefix; + gpr_asprintf(&prefix, "%s%s.%09d %7" PRIdPTR " %s:%d]", + gpr_log_severity_string(args->severity), time_buffer, +- (int)(now.tv_nsec), gettid(), display_file, args->line); ++ (int)(now.tv_nsec), sys_gettid(), display_file, args->line); + + fprintf(stderr, "%-70s %s\n", prefix, args->message); + gpr_free(prefix); +diff --git a/third_party/grpc/src/core/lib/iomgr/ev_epollex_linux.cc b/src/core/lib/iomgr/ev_epollex_linux.cc +index c2d80c08ddb..4a83cb6c215 100644 +--- a/third_party/grpc/src/core/lib/iomgr/ev_epollex_linux.cc ++++ b/third_party/grpc/src/core/lib/iomgr/ev_epollex_linux.cc +@@ -1077,7 +1077,7 @@ static void end_worker(grpc_pollset* pollset, grpc_pollset_worker* worker, + } + + #ifndef NDEBUG +-static long gettid(void) { return syscall(__NR_gettid); } ++static long sys_gettid(void) { return syscall(__NR_gettid); } + #endif + + /* pollset->mu lock must be held by the caller before calling this. +@@ -1097,7 +1097,7 @@ static grpc_error* pollset_work(grpc_pollset* pollset, + #define WORKER_PTR (&worker) + #endif + #ifndef NDEBUG +- WORKER_PTR->originator = gettid(); ++ WORKER_PTR->originator = sys_gettid(); + #endif + if (GRPC_TRACE_FLAG_ENABLED(grpc_polling_trace)) { + gpr_log(GPR_INFO, diff --git a/pkgs/development/tools/build-managers/bazel/bazel_0_29/src-deps.json b/pkgs/development/tools/build-managers/bazel/bazel_0_29/src-deps.json new file mode 100644 index 000000000000..f93794249ec7 --- /dev/null +++ b/pkgs/development/tools/build-managers/bazel/bazel_0_29/src-deps.json @@ -0,0 +1,506 @@ +{ + "0.16.2.zip": { + "name": "0.16.2.zip", + "sha256": "9b72bb0aea72d7cbcfc82a01b1e25bf3d85f791e790ddec16c65e2d906382ee0", + "urls": [ + "https://mirror.bazel.build/github.com/bazelbuild/rules_nodejs/archive/0.16.2.zip", + "https://github.com/bazelbuild/rules_nodejs/archive/0.16.2.zip" + ] + }, + "0.27.1.tar.gz": { + "name": "0.27.1.tar.gz", + "sha256": "28cb3666da80fbc62d4c46814f5468dd5d0b59f9064c0b933eee3140d706d330", + "urls": [ + "https://mirror.bazel.build/github.com/bazelbuild/bazel-toolchains/archive/0.27.1.tar.gz", + "https://github.com/bazelbuild/bazel-toolchains/archive/0.27.1.tar.gz" + ] + }, + "0d5f3f2768c6ca2faca0079a997a97ce22997a0c.zip": { + "name": 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