1 files changed, 23 insertions, 0 deletions
diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix
index fd1428615072..3fb8eacaa9e2 100644
--- a/pkgs/development/r-modules/default.nix
+++ b/pkgs/development/r-modules/default.nix
@@ -309,6 +309,7 @@ let
   };
 
   packagesWithNativeBuildInputs = {
+    adbcpostgresql = [ pkgs.postgresql ];
     arrow = [ pkgs.pkg-config pkgs.arrow-cpp ];
     adimpro = [ pkgs.imagemagick ];
     animation = [ pkgs.which ];
@@ -316,11 +317,13 @@ let
     BayesSAE = [ pkgs.gsl ];
     BayesVarSel = [ pkgs.gsl ];
     BayesXsrc = with pkgs; [ readline.dev ncurses gsl ];
+    bioacoustics = [ pkgs.fftw.dev pkgs.cmake ];
     bigGP = [ pkgs.mpi ];
     bio3d = [ pkgs.zlib ];
     BiocCheck = [ pkgs.which ];
     Biostrings = [ pkgs.zlib ];
     CellBarcode = [ pkgs.zlib ];
+    cld3 = [ pkgs.protobuf ];
     bnpmr = [ pkgs.gsl ];
     cairoDevice = [ pkgs.gtk2.dev ];
     Cairo = with pkgs; [ libtiff libjpeg cairo.dev xorg.libXt.dev fontconfig.lib ];
@@ -338,6 +341,7 @@ let
     fftwtools = with pkgs; [ fftw.dev pkg-config ];
     Formula = [ pkgs.gmp ];
     gdtools = with pkgs; [ cairo.dev fontconfig.lib freetype.dev ];
+    GeneralizedWendland = [ pkgs.gsl ];
     ggiraph = with pkgs; [ pkgs.libpng.dev ];
     git2r = with pkgs; [ zlib.dev openssl.dev libssh2.dev libgit2 pkg-config ];
     GLAD = [ pkgs.gsl ];
@@ -346,10 +350,12 @@ let
     GPBayes = [ pkgs.gsl ];
     graphscan = [ pkgs.gsl ];
     gsl = [ pkgs.gsl ];
+    gslnls = [ pkgs.gsl ];
     gert = [ pkgs.libgit2 ];
     haven = with pkgs; [ zlib.dev ];
     h5vc = [ pkgs.zlib.dev ];
     highs = [ pkgs.which pkgs.cmake ];
+    rbedrock = [ pkgs.zlib.dev pkgs.which pkgs.cmake ];
     HiCseg = [ pkgs.gsl ];
     imager = [ pkgs.xorg.libX11.dev ];
     iBMQ = [ pkgs.gsl ];
@@ -359,6 +365,7 @@ let
     jqr = [ pkgs.jq.dev ];
     KFKSDS = [ pkgs.gsl ];
     kza = [ pkgs.fftw.dev ];
+    leidenAlg = [ pkgs.gmp.dev ];
     Libra = [ pkgs.gsl ];
     LOMAR = [ pkgs.gmp.dev ];
     lpsymphony = with pkgs; [ pkg-config gfortran gettext ];
@@ -380,6 +387,7 @@ let
     pbdMPI = [ pkgs.mpi ];
     pbdPROF = [ pkgs.mpi ];
     pbdZMQ = [ pkgs.pkg-config ] ++ lib.optionals stdenv.isDarwin [ pkgs.which ];
+    pcaL1 = [ pkgs.pkg-config pkgs.clp ];
     pdftools = [ pkgs.poppler.dev ];
     phytools = [ pkgs.which ];
     PKI = [ pkgs.openssl.dev ];
@@ -426,6 +434,7 @@ let
     httpuv = [ pkgs.zlib.dev ];
     clustermq = [ pkgs.zeromq ];
     SAVE = with pkgs; [ zlib bzip2 icu xz pcre ];
+    salso = [ pkgs.cargo ];
     sdcTable = with pkgs; [ gmp glpk ];
     seewave = with pkgs; [ fftw.dev libsndfile.dev ];
     seqinr = [ pkgs.zlib.dev ];
@@ -435,6 +444,7 @@ let
     strawr = with pkgs; [ curl.dev ];
     terra = with pkgs; [ gdal proj geos ];
     apcf = with pkgs; [ geos ];
+    SemiCompRisks = [ pkgs.gsl ];
     showtext = with pkgs; [ zlib libpng icu freetype.dev ];
     simplexreg = [ pkgs.gsl ];
     spate = [ pkgs.fftw.dev ];
@@ -446,6 +456,7 @@ let
     sysfonts = with pkgs; [ zlib libpng freetype.dev ];
     systemfonts = with pkgs; [ fontconfig.dev freetype.dev ];
     TAQMNGR = [ pkgs.zlib.dev ];
+    TDA = [ pkgs.gmp ];
     tesseract = with pkgs; [ tesseract leptonica ];
     tiff = [ pkgs.libtiff.dev ];
     tkrplot = with pkgs; [ xorg.libX11 tk.dev ];
@@ -501,6 +512,7 @@ let
     RDieHarder = [ pkgs.gsl ];
     QF = [ pkgs.gsl ];
     PICS = [ pkgs.gsl ];
+    RationalMatrix = [ pkgs.pkg-config pkgs.gmp.dev];
     RcppCWB = [ pkgs.pkg-config pkgs.pcre2 ];
     redux = [ pkgs.pkg-config ];
     rrd = [ pkgs.pkg-config ];
@@ -513,6 +525,7 @@ let
     textshaping = [ pkgs.pkg-config ];
     ragg = [ pkgs.pkg-config ];
     qqconf = [ pkgs.pkg-config ];
+    vapour = [ pkgs.pkg-config ];
   };
 
   packagesWithBuildInputs = {
@@ -520,11 +533,14 @@ let
     asciicast = with pkgs; [ xz.dev bzip2.dev zlib.dev icu.dev ];
     island = [ pkgs.gsl.dev ];
     svKomodo = [ pkgs.which ];
+    ulid = [ pkgs.zlib.dev ];
     nat = [ pkgs.which ];
     nat_templatebrains = [ pkgs.which ];
     pbdZMQ = [ pkgs.zeromq ] ++ lib.optionals stdenv.isDarwin [ pkgs.darwin.binutils ];
     bigmemory = lib.optionals stdenv.isLinux [ pkgs.libuuid.dev ];
+    bayesWatch = [ pkgs.boost.dev ];
     clustermq = [  pkgs.pkg-config ];
+    coga = [ pkgs.gsl.dev ];
     webp = [ pkgs.libwebp ];
     RMark = [ pkgs.which ];
     RPushbullet = [ pkgs.which ];
@@ -588,6 +604,7 @@ let
     DiffBind = with pkgs; [ zlib.dev ];
     CNEr = with pkgs; [ zlib ];
     GMMAT = with pkgs; [ zlib.dev bzip2.dev ];
+    rmumps = with pkgs; [ zlib.dev ];
     HiCDCPlus = [ pkgs.zlib.dev ];
     PopGenome = [ pkgs.zlib.dev ];
     QuasR = [ pkgs.zlib.dev ];
@@ -642,6 +659,7 @@ let
     redux = [ pkgs.hiredis ];
     RmecabKo = [ pkgs.mecab ];
     PoissonBinomial = [ pkgs.fftw.dev ];
+    poisbinom = [ pkgs.fftw.dev ];
     PoissonMultinomial = [ pkgs.fftw.dev ];
     rrd = [ pkgs.rrdtool ];
     flowWorkspace = [ pkgs.zlib.dev ];
@@ -657,6 +675,7 @@ let
     ijtiff = [ pkgs.libtiff ];
     ragg = with pkgs; [ freetype.dev libpng.dev libtiff.dev zlib.dev libjpeg.dev bzip2.dev ];
     qqconf = [ pkgs.fftw.dev ];
+    vapour = with pkgs; [ proj.dev gdal ];
   };
 
   packagesRequiringX = [
@@ -835,6 +854,7 @@ let
     "svWidgets"
     "SYNCSA"
     "SyNet"
+    "switchboard"
     "tcltk2"
     "TestScorer"
     "TIMP"
@@ -867,10 +887,12 @@ let
     "R_filesets"
     "RKorAPClient"
     "R_rsp"
+    "salso"
     "scholar"
     "stepR"
     "styler"
     "TreeTools"
+    "TreeSearch"
     "ACNE"
     "APAlyzer"
     "EstMix"
@@ -896,6 +918,7 @@ let
     "fixest"
     "paxtoolsr"
     "systemPipeShiny"
+    "matlab2r"
   ];
 
   packagesToSkipCheck = [