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-rw-r--r--pkgs/applications/editors/android-studio/default.nix6
-rw-r--r--pkgs/applications/editors/emacs-modes/elpa-generated.nix268
-rw-r--r--pkgs/applications/editors/standardnotes/default.nix6
-rw-r--r--pkgs/applications/graphics/rapid-photo-downloader/default.nix10
-rw-r--r--pkgs/applications/misc/menumaker/default.nix4
-rw-r--r--pkgs/applications/networking/browsers/chromium/upstream-info.nix6
-rw-r--r--pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix18
-rw-r--r--pkgs/applications/networking/mailreaders/nylas-mail-bin/default.nix133
-rw-r--r--pkgs/applications/networking/mullvad-vpn/default.nix4
-rw-r--r--pkgs/applications/networking/syncthing-gtk/default.nix4
-rw-r--r--pkgs/applications/networking/syncthing/default.nix30
-rw-r--r--pkgs/applications/networking/syncthing/deps.nix480
-rw-r--r--pkgs/applications/radio/chirp/default.nix4
-rw-r--r--pkgs/applications/radio/fldigi/default.nix4
-rw-r--r--pkgs/applications/radio/flrig/default.nix4
-rw-r--r--pkgs/applications/radio/wsjtx/default.nix16
-rw-r--r--pkgs/applications/radio/wsjtx/wsjtx.patch11
-rw-r--r--pkgs/applications/science/math/sage/sage-tests.nix2
-rw-r--r--pkgs/applications/science/misc/motu-client/default.nix23
-rw-r--r--pkgs/applications/version-management/gitkraken/default.nix7
-rw-r--r--pkgs/applications/version-management/subversion/default.nix4
21 files changed, 255 insertions, 789 deletions
diff --git a/pkgs/applications/editors/android-studio/default.nix b/pkgs/applications/editors/android-studio/default.nix
index 794a881090cb..b3a7c2c817c7 100644
--- a/pkgs/applications/editors/android-studio/default.nix
+++ b/pkgs/applications/editors/android-studio/default.nix
@@ -13,9 +13,9 @@ let
     sha256Hash = "090rc307mfm0yw4h592l9307lq4aas8zq0ci49csn6kxhds8rsrm";
   };
   betaVersion = {
-    version = "3.5.0.19"; # "Android Studio 3.5 RC 2"
-    build = "191.5763348";
-    sha256Hash = "0z7mjpk0cqwk4ysd3cdsahlg70ax90353qvvag9wgyzl2x2sr6d2";
+    version = "3.5.0.20"; # "Android Studio 3.5 RC 3"
+    build = "191.5781497";
+    sha256Hash = "03c5f01dqjvz55l8vyrpypjmmip96kc27p8sw0c5jky0igiyym5j";
   };
   latestVersion = { # canary & dev
     version = "3.6.0.3"; # "Android Studio 3.6 Canary 3"
diff --git a/pkgs/applications/editors/emacs-modes/elpa-generated.nix b/pkgs/applications/editors/emacs-modes/elpa-generated.nix
index 7f0a318741fc..eeb025a88c61 100644
--- a/pkgs/applications/editors/emacs-modes/elpa-generated.nix
+++ b/pkgs/applications/editors/emacs-modes/elpa-generated.nix
@@ -39,10 +39,10 @@
       elpaBuild {
         pname = "ada-mode";
         ename = "ada-mode";
-        version = "6.1.0";
+        version = "6.1.1";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/ada-mode-6.1.0.tar";
-          sha256 = "1qa4kjv5xxlj50fghg5516cxn8ckv8vlyarcab2isxjnnxnb6g7s";
+          url = "https://elpa.gnu.org/packages/ada-mode-6.1.1.tar";
+          sha256 = "090zyspc32fmfqwr0qpzi6qclsaarvb5484b0lq0cdyzgjhimdla";
         };
         packageRequires = [ cl-lib emacs wisi ];
         meta = {
@@ -84,10 +84,10 @@
       elpaBuild {
         pname = "adjust-parens";
         ename = "adjust-parens";
-        version = "3.0";
+        version = "3.1";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/adjust-parens-3.0.tar";
-          sha256 = "16gmrgdfyqs7i617669f7xy5mds1svbyfv12xhdjk96rbssfngzg";
+          url = "https://elpa.gnu.org/packages/adjust-parens-3.1.tar";
+          sha256 = "059v0njd52vxidr5xwv2jmknm2shnwpj3101069q6lsmz1wq242a";
         };
         packageRequires = [];
         meta = {
@@ -178,10 +178,10 @@
       elpaBuild {
         pname = "arbitools";
         ename = "arbitools";
-        version = "0.976";
+        version = "0.977";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/arbitools-0.976.el";
-          sha256 = "08lvm921zhm22aghz17pps0b5g4f1xyyrl0qisdvd98kz1ajq7xr";
+          url = "https://elpa.gnu.org/packages/arbitools-0.977.el";
+          sha256 = "0nvdy14lqvy2ca4vw2qlr2kg2vv4y4sr8sa7kqrpf8cg7k9q3mbv";
         };
         packageRequires = [ cl-lib ];
         meta = {
@@ -204,7 +204,7 @@
           license = lib.licenses.free;
         };
       }) {};
-    async = callPackage ({ elpaBuild, fetchurl, lib }:
+    async = callPackage ({ cl-lib ? null, elpaBuild, fetchurl, lib, nadvice }:
       elpaBuild {
         pname = "async";
         ename = "async";
@@ -213,7 +213,7 @@
           url = "https://elpa.gnu.org/packages/async-1.9.2.tar";
           sha256 = "17fnvrj7jww29sav6a6jpizclg4w2962m6h37akpii71gf0vrffw";
         };
-        packageRequires = [];
+        packageRequires = [ cl-lib nadvice ];
         meta = {
           homepage = "https://elpa.gnu.org/packages/async.html";
           license = lib.licenses.free;
@@ -735,10 +735,10 @@
       elpaBuild {
         pname = "debbugs";
         ename = "debbugs";
-        version = "0.18";
+        version = "0.19";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/debbugs-0.18.tar";
-          sha256 = "00kich80zdg7v3v613f9prqddkpwpm1nf9sj10f0n6wh15rzwv07";
+          url = "https://elpa.gnu.org/packages/debbugs-0.19.tar";
+          sha256 = "0cpby8f088cqb5mpd756a2mb706x763k15cg2xdmmsxl415k3yw4";
         };
         packageRequires = [ cl-lib emacs soap-client ];
         meta = {
@@ -746,7 +746,7 @@
           license = lib.licenses.free;
         };
       }) {};
-    delight = callPackage ({ elpaBuild, fetchurl, lib }:
+    delight = callPackage ({ cl-lib ? null, elpaBuild, fetchurl, lib, nadvice }:
       elpaBuild {
         pname = "delight";
         ename = "delight";
@@ -755,7 +755,7 @@
           url = "https://elpa.gnu.org/packages/delight-1.5.el";
           sha256 = "0kzlvzwmn6zj0874086q2xw0pclyi7wlkq48zh2lkd2796xm8vw7";
         };
-        packageRequires = [];
+        packageRequires = [ cl-lib nadvice ];
         meta = {
           homepage = "https://elpa.gnu.org/packages/delight.html";
           license = lib.licenses.free;
@@ -780,10 +780,10 @@
       elpaBuild {
         pname = "diff-hl";
         ename = "diff-hl";
-        version = "1.8.6";
+        version = "1.8.7";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/diff-hl-1.8.6.tar";
-          sha256 = "02hvi5jxv2anf62lw878bdz6xk7xjhjd5q85pqihmadbpj6i6pfq";
+          url = "https://elpa.gnu.org/packages/diff-hl-1.8.7.tar";
+          sha256 = "1qcwicflvm6dxcflnlg891hyzwp2q79fdkdbdwp1440a0j09riam";
         };
         packageRequires = [ cl-lib emacs ];
         meta = {
@@ -870,10 +870,10 @@
       elpaBuild {
         pname = "djvu";
         ename = "djvu";
-        version = "1.0.1";
+        version = "1.1";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/djvu-1.0.1.el";
-          sha256 = "1am4cm9csc5df3mbdby7j197j8yxv0x0maf6kfmn2ww1iwcyv8x6";
+          url = "https://elpa.gnu.org/packages/djvu-1.1.el";
+          sha256 = "0njgyx09q225hliacsnjk8wallg5i6xkz6bj501pb05nwqfbvfk7";
         };
         packageRequires = [];
         meta = {
@@ -930,10 +930,10 @@
       elpaBuild {
         pname = "ebdb";
         ename = "ebdb";
-        version = "0.6.8";
+        version = "0.6.10";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/ebdb-0.6.8.tar";
-          sha256 = "0bcs4f2l6cdg6hx3crk0vchhljhgwd1ik8n0p001gs1mk91178jp";
+          url = "https://elpa.gnu.org/packages/ebdb-0.6.10.tar";
+          sha256 = "0z0q7kcwczvdh0ddd775vv233j74sjlllv8pjm446bmy9cy6pg8j";
         };
         packageRequires = [ cl-lib emacs seq ];
         meta = {
@@ -990,10 +990,10 @@
       elpaBuild {
         pname = "eev";
         ename = "eev";
-        version = "20190425";
+        version = "20190517";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/eev-20190425.tar";
-          sha256 = "0wffwdkk68hcnkggrfmx0ag3pmapdzwzq54sx8y0m68aw0by90y1";
+          url = "https://elpa.gnu.org/packages/eev-20190517.tar";
+          sha256 = "0hgjdax0kg2w7bf3idl6mw6m8j2wkh1253px42v2lbaxp6897m07";
         };
         packageRequires = [ emacs ];
         meta = {
@@ -1030,10 +1030,10 @@
       elpaBuild {
         pname = "el-search";
         ename = "el-search";
-        version = "1.12.5";
+        version = "1.12.6.1";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/el-search-1.12.5.tar";
-          sha256 = "0q6fnjp2hh8p1l7wj7645szlz6qxdfy71s0xljjrmc2836i32xzc";
+          url = "https://elpa.gnu.org/packages/el-search-1.12.6.1.tar";
+          sha256 = "150f4rirg107hmzpv8ifa32k2mgf07smbf9z44ln5rh8n17xwqah";
         };
         packageRequires = [ cl-print emacs stream ];
         meta = {
@@ -1132,10 +1132,10 @@
       elpaBuild {
         pname = "excorporate";
         ename = "excorporate";
-        version = "0.8.1";
+        version = "0.8.3";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/excorporate-0.8.1.tar";
-          sha256 = "1k89472x80wsn14y16km5bgynmmd2kbdfhylb3cc17jvdn1xr53y";
+          url = "https://elpa.gnu.org/packages/excorporate-0.8.3.tar";
+          sha256 = "04bsbiwgfbfd501qvwh0iwyk0xh442kjfj73b3876idwj3p8alr5";
         };
         packageRequires = [ emacs fsm nadvice soap-client url-http-ntlm ];
         meta = {
@@ -1207,10 +1207,10 @@
       elpaBuild {
         pname = "flymake";
         ename = "flymake";
-        version = "1.0.6";
+        version = "1.0.8";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/flymake-1.0.6.el";
-          sha256 = "10n9vnabiz3m5gs3azc76x7y1p9qhc6aspgygw7awq9ff6hhkhbw";
+          url = "https://elpa.gnu.org/packages/flymake-1.0.8.el";
+          sha256 = "1hqxrqb227v4ncjjqx8im3c4mhg8w5yjbz9hpfcm5x8xnr2yd6bp";
         };
         packageRequires = [ emacs ];
         meta = {
@@ -1222,10 +1222,10 @@
       elpaBuild {
         pname = "fountain-mode";
         ename = "fountain-mode";
-        version = "2.7.1";
+        version = "2.7.3";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/fountain-mode-2.7.1.el";
-          sha256 = "198ls0rvzgpb942mvjyljgbaxp05wjys1a003bfq528przv0vpaz";
+          url = "https://elpa.gnu.org/packages/fountain-mode-2.7.3.el";
+          sha256 = "1sz3qp3y52d05jd006zc99r4ryignpa2jgfk72rw3zfqmikzv15j";
         };
         packageRequires = [ emacs ];
         meta = {
@@ -1252,10 +1252,10 @@
       elpaBuild {
         pname = "frog-menu";
         ename = "frog-menu";
-        version = "0.2.8";
+        version = "0.2.9";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/frog-menu-0.2.8.el";
-          sha256 = "18f937lvhw2dxwldahim13pr3ppndssjp0dis95iaspiwg9mwc4h";
+          url = "https://elpa.gnu.org/packages/frog-menu-0.2.9.el";
+          sha256 = "1gjhypsafpqybcbwi49qi1g419hcq9qv4p940ybspydg9gqk3gmp";
         };
         packageRequires = [ avy emacs posframe ];
         meta = {
@@ -1596,10 +1596,10 @@
       elpaBuild {
         pname = "ivy";
         ename = "ivy";
-        version = "0.11.0";
+        version = "0.12.0";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/ivy-0.11.0.tar";
-          sha256 = "1pxapdc7jarqc8lf3a3fsn4nsi4j146dh07f89xkj087psq30v50";
+          url = "https://elpa.gnu.org/packages/ivy-0.12.0.tar";
+          sha256 = "14q9kh48iabrnhwcmhlvgk7sg4a0j5c3zjp0yzj1ijrz5zbdhxxz";
         };
         packageRequires = [ emacs ];
         meta = {
@@ -1746,10 +1746,10 @@
       elpaBuild {
         pname = "let-alist";
         ename = "let-alist";
-        version = "1.0.5";
+        version = "1.0.6";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/let-alist-1.0.5.el";
-          sha256 = "0r7b9jni50la1m79kklml11syg8d2fmdlr83pv005sv1wh02jszw";
+          url = "https://elpa.gnu.org/packages/let-alist-1.0.6.el";
+          sha256 = "0szj7vnjzz4zci5fvz7xqgcpi4pzdyyf4qi2s8xar2hi7v3yaawr";
         };
         packageRequires = [ emacs ];
         meta = {
@@ -2250,10 +2250,10 @@
       elpaBuild {
         pname = "org";
         ename = "org";
-        version = "9.2.3";
+        version = "9.2.5";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/org-9.2.3.tar";
-          sha256 = "0hqy4lns9q5p0l1ylgmlckqprn9sbasszhznanmv0rsh0gzhsbyw";
+          url = "https://elpa.gnu.org/packages/org-9.2.5.tar";
+          sha256 = "1pid1sykgz83i4ry5n8f270finag6sm7ckqxn5lkikyya43wlzx1";
         };
         packageRequires = [];
         meta = {
@@ -2366,6 +2366,21 @@
           license = lib.licenses.free;
         };
       }) {};
+    path-iterator = callPackage ({ elpaBuild, emacs, fetchurl, lib }:
+      elpaBuild {
+        pname = "path-iterator";
+        ename = "path-iterator";
+        version = "1.0";
+        src = fetchurl {
+          url = "https://elpa.gnu.org/packages/path-iterator-1.0.tar";
+          sha256 = "0kgl7rhv9x23jyr6ahfy6ql447zpz9fnmfwldkpn69g7jdx6a3cc";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://elpa.gnu.org/packages/path-iterator.html";
+          license = lib.licenses.free;
+        };
+      }) {};
     peg = callPackage ({ elpaBuild, emacs, fetchurl, lib }:
       elpaBuild {
         pname = "peg";
@@ -2381,6 +2396,36 @@
           license = lib.licenses.free;
         };
       }) {};
+    persist = callPackage ({ elpaBuild, fetchurl, lib }:
+      elpaBuild {
+        pname = "persist";
+        ename = "persist";
+        version = "0.4";
+        src = fetchurl {
+          url = "https://elpa.gnu.org/packages/persist-0.4.tar";
+          sha256 = "0gpxy41qawzss2526j9a7lys60vqma1lvamn4bfabwza7gfhac0q";
+        };
+        packageRequires = [];
+        meta = {
+          homepage = "https://elpa.gnu.org/packages/persist.html";
+          license = lib.licenses.free;
+        };
+      }) {};
+    phps-mode = callPackage ({ elpaBuild, emacs, fetchurl, lib }:
+      elpaBuild {
+        pname = "phps-mode";
+        ename = "phps-mode";
+        version = "0.2.3";
+        src = fetchurl {
+          url = "https://elpa.gnu.org/packages/phps-mode-0.2.3.tar";
+          sha256 = "1wp04d5mi97287qwhic239kkf4r69839gl0hsn5m8qr3dbkhqxy5";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://elpa.gnu.org/packages/phps-mode.html";
+          license = lib.licenses.free;
+        };
+      }) {};
     pinentry = callPackage ({ elpaBuild, fetchurl, lib }:
       elpaBuild {
         pname = "pinentry";
@@ -2415,10 +2460,10 @@
       elpaBuild {
         pname = "posframe";
         ename = "posframe";
-        version = "0.4.3";
+        version = "0.5.0";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/posframe-0.4.3.el";
-          sha256 = "06q0p4qim6lha2xr9fxaspbzw01xn01ik9gxlld6hdhh19b65cmi";
+          url = "https://elpa.gnu.org/packages/posframe-0.5.0.el";
+          sha256 = "1fjnpwg1fj9j54nymh802vd4viggrg3qnqwh52281n7zv6xfv0qb";
         };
         packageRequires = [ emacs ];
         meta = {
@@ -2556,10 +2601,10 @@
       elpaBuild {
         pname = "realgud";
         ename = "realgud";
-        version = "1.5.0";
+        version = "1.5.1";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/realgud-1.5.0.tar";
-          sha256 = "0bfshrgkfrfb1d8insnb5n25230xd0scdk6bijhgh34q2phjy2fy";
+          url = "https://elpa.gnu.org/packages/realgud-1.5.1.tar";
+          sha256 = "01155sydricdvxy3djk64w2zc6x0q4j669bvz8m8rd766wsmida8";
         };
         packageRequires = [ emacs load-relative loc-changes test-simple ];
         meta = {
@@ -2710,10 +2755,10 @@
       elpaBuild {
         pname = "relint";
         ename = "relint";
-        version = "1.8";
+        version = "1.9";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/relint-1.8.el";
-          sha256 = "1bl6m2h7131acbmr0kqfnjjpv2syiv2mxfnm61g874ynnvkmmkm3";
+          url = "https://elpa.gnu.org/packages/relint-1.9.el";
+          sha256 = "0y386kch263199mwl93ambwib948s2vrw466kf0ly9cxv7xpv6hr";
         };
         packageRequires = [ xr ];
         meta = {
@@ -2971,10 +3016,10 @@
       elpaBuild {
         pname = "sql-indent";
         ename = "sql-indent";
-        version = "1.3";
+        version = "1.4";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/sql-indent-1.3.tar";
-          sha256 = "0zira8my1q975bad2h76bz4yddjzf0dskvy6x865np86rmzd0c9w";
+          url = "https://elpa.gnu.org/packages/sql-indent-1.4.tar";
+          sha256 = "1nilxfm30nb2la1463729rgbgbma7igkf0z325k8cbapqanb1wgl";
         };
         packageRequires = [ cl-lib ];
         meta = {
@@ -3016,10 +3061,10 @@
       elpaBuild {
         pname = "svg";
         ename = "svg";
-        version = "0.2";
+        version = "1.0";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/svg-0.2.el";
-          sha256 = "14yfi27v3zdzh1chcjiq4l63iwh0vd99wv1z4w7agr33540jybc5";
+          url = "https://elpa.gnu.org/packages/svg-1.0.el";
+          sha256 = "1hh0x7sz2rqb7zdhcm2q9knr8nnwqrsbz1zfp29k8l1318li9f62";
         };
         packageRequires = [ emacs ];
         meta = {
@@ -3046,10 +3091,10 @@
       elpaBuild {
         pname = "system-packages";
         ename = "system-packages";
-        version = "1.0.10";
+        version = "1.0.11";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/system-packages-1.0.10.tar";
-          sha256 = "1vwf2j0fxrsqmrgc7x5nkkg0vlhwgxppc4w7kb5is6dgrssskpb5";
+          url = "https://elpa.gnu.org/packages/system-packages-1.0.11.tar";
+          sha256 = "0xf2q5bslxpw0wycgi2k983lnfpw182rgdzq0f99f64kb7ifns9y";
         };
         packageRequires = [ emacs ];
         meta = {
@@ -3132,6 +3177,21 @@
           license = lib.licenses.free;
         };
       }) {};
+    tramp = callPackage ({ elpaBuild, emacs, fetchurl, lib }:
+      elpaBuild {
+        pname = "tramp";
+        ename = "tramp";
+        version = "2.4.2.1";
+        src = fetchurl {
+          url = "https://elpa.gnu.org/packages/tramp-2.4.2.1.tar";
+          sha256 = "139y05b2m715zryxqw7k438cc137mziz2k5nbzrrahddfz0i3cf9";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://elpa.gnu.org/packages/tramp.html";
+          license = lib.licenses.free;
+        };
+      }) {};
     tramp-theme = callPackage ({ elpaBuild, emacs, fetchurl, lib }:
       elpaBuild {
         pname = "tramp-theme";
@@ -3207,6 +3267,21 @@
           license = lib.licenses.free;
         };
       }) {};
+    uniquify-files = callPackage ({ elpaBuild, emacs, fetchurl, lib }:
+      elpaBuild {
+        pname = "uniquify-files";
+        ename = "uniquify-files";
+        version = "1.0";
+        src = fetchurl {
+          url = "https://elpa.gnu.org/packages/uniquify-files-1.0.tar";
+          sha256 = "1n1r3pmnh9b8zb7pyv158pzmvha4gqqrfrapvpjdcrcnnd2dynkm";
+        };
+        packageRequires = [ emacs ];
+        meta = {
+          homepage = "https://elpa.gnu.org/packages/uniquify-files.html";
+          license = lib.licenses.free;
+        };
+      }) {};
     url-http-ntlm = callPackage ({ cl-lib ? null
                                  , elpaBuild
                                  , fetchurl
@@ -3276,6 +3351,23 @@
           license = lib.licenses.free;
         };
       }) {};
+    verilog-mode = callPackage ({ elpaBuild
+                                , fetchurl
+                                , lib }:
+      elpaBuild {
+        pname = "verilog-mode";
+        ename = "verilog-mode";
+        version = "2019.6.21.103209889";
+        src = fetchurl {
+          url = "https://elpa.gnu.org/packages/verilog-mode-2019.6.21.103209889.el";
+          sha256 = "0hlcp2jhm30bzx6iabdb31aqv0dmmim30g9z5kqb0hl1bd1dnm9m";
+        };
+        packageRequires = [];
+        meta = {
+          homepage = "https://elpa.gnu.org/packages/verilog-mode.html";
+          license = lib.licenses.free;
+        };
+      }) {};
     vigenere = callPackage ({ elpaBuild, emacs, fetchurl, lib }:
       elpaBuild {
         pname = "vigenere";
@@ -3358,10 +3450,10 @@
       elpaBuild {
         pname = "wcheck-mode";
         ename = "wcheck-mode";
-        version = "2016.1.30";
+        version = "2019.6.17";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/wcheck-mode-2016.1.30.el";
-          sha256 = "0hzrxnslfl04h083njy7wp4hhgrqpyz0cnm73v348kr1i4wx9xjq";
+          url = "https://elpa.gnu.org/packages/wcheck-mode-2019.6.17.el";
+          sha256 = "0579a3p9swq0j0fca9s885kzv69y9lhhnqa6m4pzdgrr6pfrirqv";
         };
         packageRequires = [];
         meta = {
@@ -3418,10 +3510,10 @@
       elpaBuild {
         pname = "websocket";
         ename = "websocket";
-        version = "1.9";
+        version = "1.11.1";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/websocket-1.9.tar";
-          sha256 = "00sd0dawpjcr79w6klya5ywq9r1p86d97z62vqpjij6yg5qv470f";
+          url = "https://elpa.gnu.org/packages/websocket-1.11.1.tar";
+          sha256 = "09s8qyi012djmm3vrj1qg1zqqy0h0cbcfzfkhybvqi4amy4jgliw";
         };
         packageRequires = [ cl-lib ];
         meta = {
@@ -3463,10 +3555,10 @@
       elpaBuild {
         pname = "wisi";
         ename = "wisi";
-        version = "2.1.0";
+        version = "2.1.1";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/wisi-2.1.0.tar";
-          sha256 = "143xfdr7agyc52wz9zsx67rvvnjs4rlj7j3cbdhvs6wyl7whyg38";
+          url = "https://elpa.gnu.org/packages/wisi-2.1.1.tar";
+          sha256 = "0j7pnjik07j2ipj3xavhayngnmk5jdglq78azrjvwni88m12920n";
         };
         packageRequires = [ cl-lib emacs seq ];
         meta = {
@@ -3493,10 +3585,10 @@
       elpaBuild {
         pname = "xclip";
         ename = "xclip";
-        version = "1.8";
+        version = "1.9";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/xclip-1.8.el";
-          sha256 = "1ymc9dhpwbh92ad7w64p8xlrjdws5c9h90h47ckh6479h8r697xg";
+          url = "https://elpa.gnu.org/packages/xclip-1.9.el";
+          sha256 = "0xbs6fw0dfm5iynhdx62cwixzizjkrwrib6n0fjnsj31kajbkf3y";
         };
         packageRequires = [];
         meta = {
@@ -3538,10 +3630,10 @@
       elpaBuild {
         pname = "xr";
         ename = "xr";
-        version = "1.12";
+        version = "1.13";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/xr-1.12.tar";
-          sha256 = "1vv87h0h8ldc1mbsn45w5z1m6jq8j2js4xz23a9ixdby06g60y3g";
+          url = "https://elpa.gnu.org/packages/xr-1.13.tar";
+          sha256 = "1km4x92pii8c4bcimks4xzhmwpypdf183z0zh7raj062jz4jb74r";
         };
         packageRequires = [];
         meta = {
@@ -3586,10 +3678,10 @@
       elpaBuild {
         pname = "zones";
         ename = "zones";
-        version = "2019.4.30";
+        version = "2019.7.13";
         src = fetchurl {
-          url = "https://elpa.gnu.org/packages/zones-2019.4.30.el";
-          sha256 = "0f0ryd9wnkg7vh2jv30bqhpzzkaf0gc2ysmib6y36s3m8c2sa9b6";
+          url = "https://elpa.gnu.org/packages/zones-2019.7.13.el";
+          sha256 = "0qp1ba2pkqx9d35g7z8hf8qs2k455krf2a92l4rka3ipsbnmq5k1";
         };
         packageRequires = [];
         meta = {
diff --git a/pkgs/applications/editors/standardnotes/default.nix b/pkgs/applications/editors/standardnotes/default.nix
index d20f413700e8..2d52aedc831c 100644
--- a/pkgs/applications/editors/standardnotes/default.nix
+++ b/pkgs/applications/editors/standardnotes/default.nix
@@ -1,7 +1,7 @@
 { stdenv, appimage-run, fetchurl, runtimeShell }:
 
 let
-  version = "3.0.6";
+  version = "3.0.15";
 
   plat = {
     "i386-linux" = "i386";
@@ -9,8 +9,8 @@ let
   }.${stdenv.hostPlatform.system};
 
   sha256 = {
-    "i386-linux" = "0czhlbacjks9x8y2w46nzlvk595psqhqw0vl0bvsq7sz768dk0ni";
-    "x86_64-linux" = "0haji9h8rrm9yvqdv6i2y6xdd0yhsssjjj83hmf6cb868lwyigsf";
+    "i386-linux" = "0v2nsis6vb1lnhmjd28vrfxqwwpycv02j0nvjlfzcgj4b3400j7a";
+    "x86_64-linux" = "130n586cw0836zsbwqcz3pp3h0d4ny74ngqs4k4cvfb92556r7xh";
   }.${stdenv.hostPlatform.system};
 in
 
diff --git a/pkgs/applications/graphics/rapid-photo-downloader/default.nix b/pkgs/applications/graphics/rapid-photo-downloader/default.nix
index 5991a3351ee1..c007f4f3de89 100644
--- a/pkgs/applications/graphics/rapid-photo-downloader/default.nix
+++ b/pkgs/applications/graphics/rapid-photo-downloader/default.nix
@@ -1,16 +1,16 @@
-{ stdenv, fetchurl, python3Packages
+{ stdenv, mkDerivationWith, fetchurl, python3Packages
 , file, intltool, gobject-introspection, libgudev
 , udisks, gexiv2, gst_all_1, libnotify
 , exiftool, gdk-pixbuf, libmediainfo, vmtouch
 }:
 
-python3Packages.buildPythonApplication rec {
+mkDerivationWith python3Packages.buildPythonApplication rec {
   pname = "rapid-photo-downloader";
-  version = "0.9.14";
+  version = "0.9.15";
 
   src = fetchurl {
     url = "https://launchpad.net/rapid/pyqt/${version}/+download/${pname}-${version}.tar.gz";
-    sha256 = "1nywkkyxlpzq3s9anza9k67j5689pfclfha218frih36qdb0j258";
+    sha256 = "14s8x2qp1li05pailflw1nprp79q0aa7lb92hnwa1air8756z7al";
   };
 
   # Disable version check and fix install tests
@@ -64,6 +64,7 @@ python3Packages.buildPythonApplication rec {
     requests
     colorlog
     pyprind
+    tenacity
   ];
 
   makeWrapperArgs = [
@@ -72,6 +73,7 @@ python3Packages.buildPythonApplication rec {
     "--prefix PATH : ${stdenv.lib.makeBinPath [ exiftool vmtouch ]}"
     "--prefix LD_LIBRARY_PATH : ${stdenv.lib.makeLibraryPath [ libmediainfo ]}"
     "--prefix GST_PLUGIN_SYSTEM_PATH_1_0 : \"$GST_PLUGIN_SYSTEM_PATH_1_0\""
+    "\${qtWrapperArgs[@]}"
   ];
 
   meta = with stdenv.lib; {
diff --git a/pkgs/applications/misc/menumaker/default.nix b/pkgs/applications/misc/menumaker/default.nix
index 56854e7863fe..718f2e46fa00 100644
--- a/pkgs/applications/misc/menumaker/default.nix
+++ b/pkgs/applications/misc/menumaker/default.nix
@@ -2,11 +2,11 @@
 
 pythonPackages.buildPythonApplication rec {
   name = "menumaker-${version}";
-  version = "0.99.10";
+  version = "0.99.11";
 
   src = fetchurl {
     url = "mirror://sourceforge/menumaker/${name}.tar.gz";
-    sha256 = "1mm4cvg3kphkkd8nwrhcg6d9nm5ar7mgc0wf6fxk6zck1l7xn8ky";
+    sha256 = "0dprndnhwm7b803zkp4pisiq06ic9iv8vr42in5is47jmvdim0wx";
   };
 
   format = "other";
diff --git a/pkgs/applications/networking/browsers/chromium/upstream-info.nix b/pkgs/applications/networking/browsers/chromium/upstream-info.nix
index d8d2aff0d097..f8e56937021a 100644
--- a/pkgs/applications/networking/browsers/chromium/upstream-info.nix
+++ b/pkgs/applications/networking/browsers/chromium/upstream-info.nix
@@ -11,8 +11,8 @@
     version = "77.0.3860.5";
   };
   stable = {
-    sha256 = "1521vh38mfgy7aj1lw1vpbdm8m6wyh52d5p7bz4x6kvvxsnacp11";
-    sha256bin64 = "0hnfn2zxdrp96a4p98r08w4krzwkpb1kp4rjk03754akjyg1b3xx";
-    version = "76.0.3809.87";
+    sha256 = "0vfjfxsqf8jrmd7y08ln1lpbilwi150875zn2bawwdq87vd3mncc";
+    sha256bin64 = "1c5rlqgshv5295wg5cji12z2b38l6a81l94spmzr46h5z9nn1gqx";
+    version = "76.0.3809.100";
   };
 }
diff --git a/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix b/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix
index 13c03b419097..4f9bbe021d18 100644
--- a/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix
+++ b/pkgs/applications/networking/instant-messengers/telegram/tdesktop/default.nix
@@ -1,4 +1,4 @@
-{ mkDerivation, lib, fetchFromGitHub, fetchsvn
+{ mkDerivation, lib, fetchFromGitHub, fetchsvn, fetchpatch
 , pkgconfig, pythonPackages, cmake, wrapGAppsHook, wrapQtAppsHook, gcc8
 , qtbase, qtimageformats, gtk3, libappindicator-gtk3, libnotify, xdg_utils
 , dee, ffmpeg, openalSoft, minizip, libopus, alsaLib, libpulseaudio, range-v3
@@ -8,14 +8,14 @@ with lib;
 
 mkDerivation rec {
   name = "telegram-desktop-${version}";
-  version = "1.7.14";
+  version = "1.8.0";
 
   # Telegram-Desktop with submodules
   src = fetchFromGitHub {
     owner = "telegramdesktop";
     repo = "tdesktop";
     rev = "v${version}";
-    sha256 = "1bw804a9kffmn23wv0570wihbvfm7jy9cqmxlv196f4j7bw7zkv3";
+    sha256 = "09r62dra6gab8hiyzyysslgqkzswf8vwfkcixbcb0jk5la0m07yy";
     fetchSubmodules = true;
   };
 
@@ -23,8 +23,12 @@ mkDerivation rec {
   archPatches = fetchsvn {
     url = "svn://svn.archlinux.org/community/telegram-desktop/trunk";
     # svn log svn://svn.archlinux.org/community/telegram-desktop/trunk
-    rev = "487779";
-    sha256 = "0f09hvimb66xqksb2v0zc4ryshx7y7z0rafzjd99x37rpib9f3kq";
+    rev = "498563";
+    sha256 = "0g2y6impygqhfiqnyxc1ivxwl8j82q9qcnkqcjn6mwj3cisyxwnl";
+  };
+  privateHeadersPatch = fetchpatch {
+    url = "https://github.com/telegramdesktop/tdesktop/commit/b9d3ba621eb8af638af46c6b3cfd7a8330bf0dd5.patch";
+    sha256 = "1s5xvcp9dk0jfywssk8xfcsh7bk5xxif8xqnba0413lfx5rgvs5v";
   };
 
   patches = [
@@ -32,7 +36,6 @@ mkDerivation rec {
     "${archPatches}/no-gtk2.patch"
     # "${archPatches}/Use-system-wide-font.patch"
     "${archPatches}/tdesktop_lottie_animation_qtdebug.patch"
-    "${archPatches}/issue6219.patch"
   ];
 
   postPatch = ''
@@ -79,8 +82,11 @@ mkDerivation rec {
   CPPFLAGS = NIX_CFLAGS_COMPILE;
 
   preConfigure = ''
+    # Patches to revert:
     patch -R -Np1 -i "${archPatches}/demibold.patch"
+    patch -R -Np1 -i "${privateHeadersPatch}"
 
+    # Patches to apply:
     pushd "Telegram/ThirdParty/libtgvoip"
     patch -Np1 -i "${archPatches}/libtgvoip.patch"
     popd
diff --git a/pkgs/applications/networking/mailreaders/nylas-mail-bin/default.nix b/pkgs/applications/networking/mailreaders/nylas-mail-bin/default.nix
deleted file mode 100644
index 5bb24c9ded7e..000000000000
--- a/pkgs/applications/networking/mailreaders/nylas-mail-bin/default.nix
+++ /dev/null
@@ -1,133 +0,0 @@
-{ dpkg, fetchurl, lib, pkgs, stdenv
-, alsaLib
-, atk
-, cairo
-, coreutils
-, cups
-, dbus
-, desktop-file-utils
-, expat
-, fontconfig
-, freetype
-, gcc-unwrapped
-, gdk-pixbuf
-, glib
-, gnome2
-, libgnome-keyring
-, libnotify
-, makeWrapper
-, nodejs
-, nspr
-, nss
-, pango
-, python2
-, udev
-, wget
-, xorg
-}:
-
-stdenv.mkDerivation rec {
-  name = "${pkgname}-${version}";
-  pkgname = "nylas-mail-bin";
-  version = "2.0.32";
-  subVersion = "fec7941";
-
-  src =
-    if stdenv.hostPlatform.system == "x86_64-linux" then
-      fetchurl {
-        url = "https://edgehill.s3.amazonaws.com/${version}-${subVersion}/linux-deb/x64/NylasMail.deb";
-        sha256 = "40060aa1dc3b5187b8ed4a07b9de3427e3c5a291df98c2c82395647fa2aa4ada";
-      }
-    else
-      throw "NylasMail is not supported on ${stdenv.hostPlatform.system}";
-
-  propagatedBuildInputs = [
-    alsaLib
-    atk
-    cairo
-    coreutils
-    cups
-    dbus
-    desktop-file-utils
-    expat
-    fontconfig
-    freetype
-    gcc-unwrapped
-    gdk-pixbuf
-    glib
-    gnome2.GConf
-    gnome2.gtk
-    libgnome-keyring
-    libnotify
-    nodejs
-    nspr
-    nss
-    pango
-    python2
-    udev
-    wget
-    xorg.libX11
-    xorg.libXScrnSaver
-    xorg.libXcomposite
-    xorg.libXcursor
-    xorg.libXdamage
-    xorg.libXext
-    xorg.libXfixes
-    xorg.libXi
-    xorg.libXrandr
-    xorg.libXrender
-    xorg.libXtst
-    xorg.libxkbfile
-  ];
-
-
-  nativeBuildInputs = [ makeWrapper ];
-
-  buildCommand = ''
-    mkdir -p $out
-
-    ${dpkg}/bin/dpkg-deb -x $src unpacked
-    mv unpacked/usr/* $out/
-
-    # Fix path in desktop file
-    substituteInPlace $out/share/applications/nylas-mail.desktop \
-      --replace /usr/bin/nylas-mail $out/bin/nylas-mail
-
-    # Patch librariess
-    noderp=$(patchelf --print-rpath $out/share/nylas-mail/libnode.so)
-    patchelf --set-rpath $noderp:$out/lib:${stdenv.cc.cc.lib}/lib:${xorg.libxkbfile.out}/lib:${lib.makeLibraryPath propagatedBuildInputs } \
-      $out/share/nylas-mail/libnode.so
-
-    ffrp=$(patchelf --print-rpath $out/share/nylas-mail/libffmpeg.so)
-    patchelf --set-rpath $ffrp:$out/lib:${stdenv.cc.cc.lib}/lib:${lib.makeLibraryPath propagatedBuildInputs } \
-      $out/share/nylas-mail/libffmpeg.so
-
-    # Patch binaries
-    binrp=$(patchelf --print-rpath $out/share/nylas-mail/nylas)
-    patchelf --interpreter $(cat "$NIX_CC"/nix-support/dynamic-linker) \
-      --set-rpath $binrp:$out/lib:${stdenv.cc.cc.lib}/lib:${lib.makeLibraryPath propagatedBuildInputs } \
-      $out/share/nylas-mail/nylas
-
-    wrapProgram $out/share/nylas-mail/nylas --set LD_LIBRARY_PATH "${xorg.libxkbfile}/lib:${pkgs.gnome3.libgnome-keyring}/lib";
-
-    # Fix path to bash so apm can install plugins.
-    substituteInPlace $out/share/nylas-mail/resources/apm/bin/apm \
-      --replace /bin/bash ${stdenv.shell}
-
-    wrapProgram $out/share/nylas-mail/resources/apm/bin/apm \
-      --set PATH "${coreutils}/bin"
-    patchelf --interpreter $(cat "$NIX_CC"/nix-support/dynamic-linker) \
-      --set-rpath ${gcc-unwrapped.lib}/lib $out/share/nylas-mail/resources/apm/bin/node
-  '';
-
-  meta = with stdenv.lib; {
-    description = "Open-source mail client built on the modern web with Electron, React, and Flux";
-    longDescription = ''
-      Nylas Mail is an open-source mail client built on the modern web with Electron, React, and Flux. It is designed to be extensible, so it's easy to create new experiences and workflows around email. Nylas Mail can be enabled with it's requirements by enabling 'services.nylas-mail.enable=true'. Alternatively, make sure to have services.gnome3.gnome-keyring.enable = true; in your configuration.nix before running nylas-mail. If you happen to miss this step, you should remove ~/.nylas-mail and "~/.config/Nylas Mail" for a blank setup".
-    '';
-    license = licenses.gpl3;
-    maintainers = with maintainers; [ johnramsden ];
-    homepage = https://nylas.com;
-    platforms = [ "x86_64-linux" ];
-  };
-}
diff --git a/pkgs/applications/networking/mullvad-vpn/default.nix b/pkgs/applications/networking/mullvad-vpn/default.nix
index 2cbf83c16aee..9ee16298ef1c 100644
--- a/pkgs/applications/networking/mullvad-vpn/default.nix
+++ b/pkgs/applications/networking/mullvad-vpn/default.nix
@@ -40,11 +40,11 @@ in
 
 stdenv.mkDerivation rec {
   pname = "mullvad-vpn";
-  version = "2019.5";
+  version = "2019.6";
 
   src = fetchurl {
     url = "https://www.mullvad.net/media/app/MullvadVPN-${version}_amd64.deb";
-    sha256 = "542a93521906cd5e97075c9f3e9088c19562b127556a3de151e25bc66b11fe0b";
+    sha256 = "0hlkka8mk7qzfhgsl10nz495nswh27gn7l9bd24c6lpkqnapz0vg";
   };
 
   nativeBuildInputs = [
diff --git a/pkgs/applications/networking/syncthing-gtk/default.nix b/pkgs/applications/networking/syncthing-gtk/default.nix
index 696ced2d2465..328561529ce5 100644
--- a/pkgs/applications/networking/syncthing-gtk/default.nix
+++ b/pkgs/applications/networking/syncthing-gtk/default.nix
@@ -1,7 +1,8 @@
 { stdenv, fetchFromGitHub, fetchpatch, libnotify, librsvg, killall
 , gtk3, libappindicator-gtk3, substituteAll, syncthing, wrapGAppsHook
 , gnome3, buildPythonApplication, dateutil, pyinotify, pygobject3
-, bcrypt, gobject-introspection, gsettings-desktop-schemas }:
+, bcrypt, gobject-introspection, gsettings-desktop-schemas
+, pango, gdk-pixbuf, atk }:
 
 buildPythonApplication rec {
   version = "0.9.4";
@@ -18,6 +19,7 @@ buildPythonApplication rec {
     wrapGAppsHook
     # For setup hook populating GI_TYPELIB_PATH
     gobject-introspection
+    pango gdk-pixbuf atk libnotify
   ];
 
   buildInputs = [
diff --git a/pkgs/applications/networking/syncthing/default.nix b/pkgs/applications/networking/syncthing/default.nix
index cc916e069a00..5b847163a2a7 100644
--- a/pkgs/applications/networking/syncthing/default.nix
+++ b/pkgs/applications/networking/syncthing/default.nix
@@ -1,21 +1,21 @@
-{ buildGoPackage, stdenv, lib, procps, fetchFromGitHub }:
+{ buildGoModule, stdenv, lib, procps, fetchFromGitHub }:
 
 let
   common = { stname, target, postInstall ? "" }:
-    buildGoPackage rec {
-      version = "1.1.4";
+    buildGoModule rec {
+      version = "1.2.1";
       name = "${stname}-${version}";
 
       src = fetchFromGitHub {
         owner  = "syncthing";
         repo   = "syncthing";
         rev    = "v${version}";
-        sha256 = "0a19l1kp4cwyzcd53v9yzv3ms69gn78gajkyfawafr7ls0i8x82f";
+        sha256 = "0q1x6kd5kaij8mvs6yll2vqfzrbb31y5hpg6g5kjc8gngwv4rl6v";
       };
 
       goPackagePath = "github.com/syncthing/syncthing";
 
-      goDeps = ./deps.nix;
+      modSha256 = "1daixrpdj97ck02853hwp8l158sja5a7a37h0gdbwb1lgf5hsn05";
 
       patches = [
         ./add-stcli-target.patch
@@ -25,18 +25,14 @@ let
 
       buildPhase = ''
         runHook preBuild
-        pushd go/src/${goPackagePath}
         go run build.go -no-upgrade -version v${version} build ${target}
-        popd
         runHook postBuild
       '';
 
       installPhase = ''
-        pushd go/src/${goPackagePath}
         runHook preInstall
-        install -Dm755 ${target} $bin/bin/${target}
+        install -Dm755 ${target} $out/bin/${target}
         runHook postInstall
-        popd
       '';
 
       inherit postInstall;
@@ -65,19 +61,19 @@ in {
       done
 
     '' + lib.optionalString (stdenv.isLinux) ''
-      mkdir -p $bin/lib/systemd/{system,user}
+      mkdir -p $out/lib/systemd/{system,user}
 
       substitute etc/linux-systemd/system/syncthing-resume.service \
-                 $bin/lib/systemd/system/syncthing-resume.service \
+                 $out/lib/systemd/system/syncthing-resume.service \
                  --replace /usr/bin/pkill ${procps}/bin/pkill
 
       substitute etc/linux-systemd/system/syncthing@.service \
-                 $bin/lib/systemd/system/syncthing@.service \
-                 --replace /usr/bin/syncthing $bin/bin/syncthing
+                 $out/lib/systemd/system/syncthing@.service \
+                 --replace /usr/bin/syncthing $out/bin/syncthing
 
       substitute etc/linux-systemd/user/syncthing.service \
-                 $bin/lib/systemd/user/syncthing.service \
-                 --replace /usr/bin/syncthing $bin/bin/syncthing
+                 $out/lib/systemd/user/syncthing.service \
+                 --replace /usr/bin/syncthing $out/bin/syncthing
     '';
   };
 
@@ -101,7 +97,7 @@ in {
 
       substitute cmd/strelaysrv/etc/linux-systemd/strelaysrv.service \
                  $out/lib/systemd/system/strelaysrv.service \
-                 --replace /usr/bin/strelaysrv $bin/bin/strelaysrv
+                 --replace /usr/bin/strelaysrv $out/bin/strelaysrv
     '';
   };
 }
diff --git a/pkgs/applications/networking/syncthing/deps.nix b/pkgs/applications/networking/syncthing/deps.nix
deleted file mode 100644
index 4a58a490cc5a..000000000000
--- a/pkgs/applications/networking/syncthing/deps.nix
+++ /dev/null
@@ -1,480 +0,0 @@
-# file generated from go.mod using vgo2nix (https://github.com/adisbladis/vgo2nix)
-[
-  {
-    goPackagePath = "github.com/AudriusButkevicius/go-nat-pmp";
-    fetch = {
-      type = "git";
-      url = "https://github.com/AudriusButkevicius/go-nat-pmp";
-      rev = "452c97607362";
-      sha256 = "1accmpl1llk16a19nlyy991fqrgfay6l53gb64hgmdfmqljdvbk7";
-    };
-  }
-  {
-    goPackagePath = "github.com/AudriusButkevicius/recli";
-    fetch = {
-      type = "git";
-      url = "https://github.com/AudriusButkevicius/recli";
-      rev = "v0.0.5";
-      sha256 = "1m1xna1kb78pkmr1lfmvvnpk9j7c4x71j3a7c6vj7zpzc4srpsmf";
-    };
-  }
-  {
-    goPackagePath = "github.com/beorn7/perks";
-    fetch = {
-      type = "git";
-      url = "https://github.com/beorn7/perks";
-      rev = "3a771d992973";
-      sha256 = "1l2lns4f5jabp61201sh88zf3b0q793w4zdgp9nll7mmfcxxjif3";
-    };
-  }
-  {
-    goPackagePath = "github.com/bkaradzic/go-lz4";
-    fetch = {
-      type = "git";
-      url = "https://github.com/bkaradzic/go-lz4";
-      rev = "7224d8d8f27e";
-      sha256 = "10lmya17vdqg2pvqni0p73iahni48s1v11ya9a0hcz4jh5vw4dkb";
-    };
-  }
-  {
-    goPackagePath = "github.com/calmh/du";
-    fetch = {
-      type = "git";
-      url = "https://github.com/calmh/du";
-      rev = "v1.0.1";
-      sha256 = "0qb3a6y3p9nkyn3s66k6zcm16y8n8578qh23ddj14cxf2scrr2n2";
-    };
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-  {
-    goPackagePath = "github.com/calmh/xdr";
-    fetch = {
-      type = "git";
-      url = "https://github.com/calmh/xdr";
-      rev = "v1.1.0";
-      sha256 = "072wqdncz3nd4a3zkhvzzx1y3in1lm29wfvl0d8wrnqs5pyqh0mh";
-    };
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-  {
-    goPackagePath = "github.com/chmduquesne/rollinghash";
-    fetch = {
-      type = "git";
-      url = "https://github.com/chmduquesne/rollinghash";
-      rev = "a60f8e7142b5";
-      sha256 = "0fpaqq4zb0wikgbhn7vwqqj1h865f5xy195vkhivsp922p7qwsjr";
-    };
-  }
-  {
-    goPackagePath = "github.com/d4l3k/messagediff";
-    fetch = {
-      type = "git";
-      url = "https://github.com/d4l3k/messagediff";
-      rev = "v1.2.1";
-      sha256 = "104hl8x57ciaz7mzafg1vp9qggxcyfm8hsv9bmlihbz9ml3nyr8v";
-    };
-  }
-  {
-    goPackagePath = "github.com/davecgh/go-spew";
-    fetch = {
-      type = "git";
-      url = "https://github.com/davecgh/go-spew";
-      rev = "v1.1.1";
-      sha256 = "0hka6hmyvp701adzag2g26cxdj47g21x6jz4sc6jjz1mn59d474y";
-    };
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-    fetch = {
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-      url = "https://github.com/flynn-archive/go-shlex";
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-      sha256 = "1j743lysygkpa2s2gii2xr32j7bxgc15zv4113b0q9jhn676ysia";
-    };
-  }
-  {
-    goPackagePath = "github.com/gobwas/glob";
-    fetch = {
-      type = "git";
-      url = "https://github.com/gobwas/glob";
-      rev = "51eb1ee00b6d";
-      sha256 = "090wzpwsjana1qas8ipwh1pj959gvc4b7vwybzi01f3bmd79jwlp";
-    };
-  }
-  {
-    goPackagePath = "github.com/gogo/protobuf";
-    fetch = {
-      type = "git";
-      url = "https://github.com/gogo/protobuf";
-      rev = "v1.2.0";
-      sha256 = "1c3y5m08mvrgvlw0kb9pldh3kkqcj99pa8gqmk1g3hp8ih3b2dv0";
-    };
-  }
-  {
-    goPackagePath = "github.com/golang/groupcache";
-    fetch = {
-      type = "git";
-      url = "https://github.com/golang/groupcache";
-      rev = "84a468cf14b4";
-      sha256 = "1ky1r9qh54yi9zp2769qrjngzndgd8fn7mja2qfac285n06chmcn";
-    };
-  }
-  {
-    goPackagePath = "github.com/golang/protobuf";
-    fetch = {
-      type = "git";
-      url = "https://github.com/golang/protobuf";
-      rev = "v1.2.0";
-      sha256 = "0kf4b59rcbb1cchfny2dm9jyznp8ri2hsb14n8iak1q8986xa0ab";
-    };
-  }
-  {
-    goPackagePath = "github.com/golang/snappy";
-    fetch = {
-      type = "git";
-      url = "https://github.com/golang/snappy";
-      rev = "553a64147049";
-      sha256 = "0kssxnih1l722hx9219c7javganjqkqhvl3i0hp0hif6xm6chvqk";
-    };
-  }
-  {
-    goPackagePath = "github.com/jackpal/gateway";
-    fetch = {
-      type = "git";
-      url = "https://github.com/jackpal/gateway";
-      rev = "5795ac81146e";
-      sha256 = "0fkwkwmhfadwk3cha8616bhqxfkr9gjjnynhhxyldlphixgs3f25";
-    };
-  }
-  {
-    goPackagePath = "github.com/kballard/go-shellquote";
-    fetch = {
-      type = "git";
-      url = "https://github.com/kballard/go-shellquote";
-      rev = "cd60e84ee657";
-      sha256 = "1xjpin4jq1zl84dcn96xhjmn9bsfyszf6g9aqyj2dc0xfi6c88y0";
-    };
-  }
-  {
-    goPackagePath = "github.com/kr/pretty";
-    fetch = {
-      type = "git";
-      url = "https://github.com/kr/pretty";
-      rev = "v0.1.0";
-      sha256 = "18m4pwg2abd0j9cn5v3k2ksk9ig4vlwxmlw9rrglanziv9l967qp";
-    };
-  }
-  {
-    goPackagePath = "github.com/kr/pty";
-    fetch = {
-      type = "git";
-      url = "https://github.com/kr/pty";
-      rev = "v1.1.1";
-      sha256 = "0383f0mb9kqjvncqrfpidsf8y6ns5zlrc91c6a74xpyxjwvzl2y6";
-    };
-  }
-  {
-    goPackagePath = "github.com/kr/text";
-    fetch = {
-      type = "git";
-      url = "https://github.com/kr/text";
-      rev = "v0.1.0";
-      sha256 = "1gm5bsl01apvc84bw06hasawyqm4q84vx1pm32wr9jnd7a8vjgj1";
-    };
-  }
-  {
-    goPackagePath = "github.com/lib/pq";
-    fetch = {
-      type = "git";
-      url = "https://github.com/lib/pq";
-      rev = "v1.0.0";
-      sha256 = "1zqnnyczaf00xi6xh53vq758v5bdlf0iz7kf22l02cal4i6px47i";
-    };
-  }
-  {
-    goPackagePath = "github.com/mattn/go-isatty";
-    fetch = {
-      type = "git";
-      url = "https://github.com/mattn/go-isatty";
-      rev = "v0.0.4";
-      sha256 = "0zs92j2cqaw9j8qx1sdxpv3ap0rgbs0vrvi72m40mg8aa36gd39w";
-    };
-  }
-  {
-    goPackagePath = "github.com/matttproud/golang_protobuf_extensions";
-    fetch = {
-      type = "git";
-      url = "https://github.com/matttproud/golang_protobuf_extensions";
-      rev = "v1.0.1";
-      sha256 = "1d0c1isd2lk9pnfq2nk0aih356j30k3h1gi2w0ixsivi5csl7jya";
-    };
-  }
-  {
-    goPackagePath = "github.com/minio/sha256-simd";
-    fetch = {
-      type = "git";
-      url = "https://github.com/minio/sha256-simd";
-      rev = "cc1980cb0338";
-      sha256 = "04fp98nal0wsb26zwhw82spn5camxslc68g3xp8g4af9w6k9g31j";
-    };
-  }
-  {
-    goPackagePath = "github.com/onsi/ginkgo";
-    fetch = {
-      type = "git";
-      url = "https://github.com/onsi/ginkgo";
-      rev = "6c46eb8334b3";
-      sha256 = "0lxmpg3zhn7r2q8c29wcw0sqn5c48ihhb7qfh9m676c9j455rpm8";
-    };
-  }
-  {
-    goPackagePath = "github.com/onsi/gomega";
-    fetch = {
-      type = "git";
-      url = "https://github.com/onsi/gomega";
-      rev = "ba3724c94e4d";
-      sha256 = "0fqs7kyqzz2lykbr2xbvd8imvx748xv4lh4d6fdy3wkwxs2f9fhp";
-    };
-  }
-  {
-    goPackagePath = "github.com/oschwald/geoip2-golang";
-    fetch = {
-      type = "git";
-      url = "https://github.com/oschwald/geoip2-golang";
-      rev = "v1.1.0";
-      sha256 = "10pvjmbm1wc8xxwqlcfhdj2mciiyfddghmp6jyn7brd4mg65ppy2";
-    };
-  }
-  {
-    goPackagePath = "github.com/oschwald/maxminddb-golang";
-    fetch = {
-      type = "git";
-      url = "https://github.com/oschwald/maxminddb-golang";
-      rev = "26fe5ace1c70";
-      sha256 = "0szb96zq1jbd9zpf4qn9zng4582ww9mg8zgrqxbkkpf3862r6n49";
-    };
-  }
-  {
-    goPackagePath = "github.com/petermattis/goid";
-    fetch = {
-      type = "git";
-      url = "https://github.com/petermattis/goid";
-      rev = "3db12ebb2a59";
-      sha256 = "0z18a3mr72c52g7g94n08gxw0ksnaafbfwdl5p5jav2sffirb0kd";
-    };
-  }
-  {
-    goPackagePath = "github.com/pkg/errors";
-    fetch = {
-      type = "git";
-      url = "https://github.com/pkg/errors";
-      rev = "v0.8.1";
-      sha256 = "0g5qcb4d4fd96midz0zdk8b9kz8xkzwfa8kr1cliqbg8sxsy5vd1";
-    };
-  }
-  {
-    goPackagePath = "github.com/pmezard/go-difflib";
-    fetch = {
-      type = "git";
-      url = "https://github.com/pmezard/go-difflib";
-      rev = "v1.0.0";
-      sha256 = "0c1cn55m4rypmscgf0rrb88pn58j3ysvc2d0432dp3c6fqg6cnzw";
-    };
-  }
-  {
-    goPackagePath = "github.com/prometheus/client_golang";
-    fetch = {
-      type = "git";
-      url = "https://github.com/prometheus/client_golang";
-      rev = "v0.9.2";
-      sha256 = "02b4yg6rfag0m3j0i39sillcm5xczwv8h133vn12yr8qw04cnigs";
-    };
-  }
-  {
-    goPackagePath = "github.com/prometheus/client_model";
-    fetch = {
-      type = "git";
-      url = "https://github.com/prometheus/client_model";
-      rev = "5c3871d89910";
-      sha256 = "04psf81l9fjcwascsys428v03fx4fi894h7fhrj2vvcz723q57k0";
-    };
-  }
-  {
-    goPackagePath = "github.com/prometheus/common";
-    fetch = {
-      type = "git";
-      url = "https://github.com/prometheus/common";
-      rev = "4724e9255275";
-      sha256 = "0pcx8hlnrxx5nnmpk786cn99rsgqk1jrd3c9f6fsx8qd8y5iwjy6";
-    };
-  }
-  {
-    goPackagePath = "github.com/prometheus/procfs";
-    fetch = {
-      type = "git";
-      url = "https://github.com/prometheus/procfs";
-      rev = "1dc9a6cbc91a";
-      sha256 = "1zlv1x30xp7z5c3vn5vp870v4bjim0zcidzc3mr2l3xhazc0svab";
-    };
-  }
-  {
-    goPackagePath = "github.com/rcrowley/go-metrics";
-    fetch = {
-      type = "git";
-      url = "https://github.com/rcrowley/go-metrics";
-      rev = "e181e095bae9";
-      sha256 = "1pwkyw801hy7n94skzk6h177zqcil6ayrmb5gs3jdpsfayh8ia5w";
-    };
-  }
-  {
-    goPackagePath = "github.com/sasha-s/go-deadlock";
-    fetch = {
-      type = "git";
-      url = "https://github.com/sasha-s/go-deadlock";
-      rev = "v0.2.0";
-      sha256 = "13p7b7pakd9k1c2k0fs1hfim3c8mivz679977ai6zb01s4aw7gyg";
-    };
-  }
-  {
-    goPackagePath = "github.com/stretchr/testify";
-    fetch = {
-      type = "git";
-      url = "https://github.com/stretchr/testify";
-      rev = "v1.2.2";
-      sha256 = "0dlszlshlxbmmfxj5hlwgv3r22x0y1af45gn1vd198nvvs3pnvfs";
-    };
-  }
-  {
-    goPackagePath = "github.com/syncthing/notify";
-    fetch = {
-      type = "git";
-      url = "https://github.com/syncthing/notify";
-      rev = "4e389ea6c0d8";
-      sha256 = "19gvl14s1l9m82f8c2xsjcr8lmbqrvw1mxkayvfcpimvxfz0j61i";
-    };
-  }
-  {
-    goPackagePath = "github.com/syndtr/goleveldb";
-    fetch = {
-      type = "git";
-      url = "https://github.com/syndtr/goleveldb";
-      rev = "34011bf325bc";
-      sha256 = "097ja0vyj6p27zrxha9nhk09fj977xsvhmd3bk2hbyvnbw4znnhd";
-    };
-  }
-  {
-    goPackagePath = "github.com/thejerf/suture";
-    fetch = {
-      type = "git";
-      url = "https://github.com/thejerf/suture";
-      rev = "v3.0.2";
-      sha256 = "03bdrl78jfwk0kw40lj63ga9cxhgccgss8yi9lp5j0m0ml7921gh";
-    };
-  }
-  {
-    goPackagePath = "github.com/urfave/cli";
-    fetch = {
-      type = "git";
-      url = "https://github.com/urfave/cli";
-      rev = "v1.20.0";
-      sha256 = "0y6f4sbzkiiwrxbl15biivj8c7qwxnvm3zl2dd3mw4wzg4x10ygj";
-    };
-  }
-  {
-    goPackagePath = "github.com/vitrun/qart";
-    fetch = {
-      type = "git";
-      url = "https://github.com/vitrun/qart";
-      rev = "bf64b92db6b0";
-      sha256 = "1xk7qki703xmay9ghi3kq2bjf1iw9dz8wik55739d6i7sn77vvkc";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/crypto";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/crypto";
-      rev = "c2843e01d9a2";
-      sha256 = "01xgxbj5r79nmisdvpq48zfy8pzaaj90bn6ngd4nf33j9ar1dp8r";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/net";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/net";
-      rev = "351d144fa1fc";
-      sha256 = "1c5x25qjyz83y92bq0lll5kmznyi3m02wd4c54scgf0866gy938k";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/sync";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/sync";
-      rev = "42b317875d0f";
-      sha256 = "0mrjhk7al7yyh76x9flvxy4jm5jyqh2fxbxagpaazxn1xdgkaif3";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/sys";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/sys";
-      rev = "d0b11bdaac8a";
-      sha256 = "18yfsmw622l7gc5sqriv5qmck6903vvhivpzp8i3xfy3z33dybdl";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/text";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/text";
-      rev = "e19ae1496984";
-      sha256 = "1cvnnx8nwx5c7gr6ajs7sldhbqh52n7h6fsa3i21l2lhx6xrsh4w";
-    };
-  }
-  {
-    goPackagePath = "golang.org/x/time";
-    fetch = {
-      type = "git";
-      url = "https://go.googlesource.com/time";
-      rev = "6dc17368e09b";
-      sha256 = "1fx4cf5fpdz00g3c7vxzy92hdcg0vh4yqw00qp5s52j72qixynbk";
-    };
-  }
-  {
-    goPackagePath = "gopkg.in/asn1-ber.v1";
-    fetch = {
-      type = "git";
-      url = "https://gopkg.in/asn1-ber.v1";
-      rev = "379148ca0225";
-      sha256 = "1y8bvzbxpw0lfnn7pbcdwzqj4l90qj6xf88dvv9pxd9yl5g6cskx";
-    };
-  }
-  {
-    goPackagePath = "gopkg.in/check.v1";
-    fetch = {
-      type = "git";
-      url = "https://gopkg.in/check.v1";
-      rev = "788fd7840127";
-      sha256 = "0v3bim0j375z81zrpr5qv42knqs0y2qv2vkjiqi5axvb78slki1a";
-    };
-  }
-  {
-    goPackagePath = "gopkg.in/ldap.v2";
-    fetch = {
-      type = "git";
-      url = "https://gopkg.in/ldap.v2";
-      rev = "v2.5.1";
-      sha256 = "1wf81wy04nhkqs0dg5zkivr4sh37r83bxrfwjz9vr4jq6vmljr3h";
-    };
-  }
-  {
-    goPackagePath = "gopkg.in/yaml.v2";
-    fetch = {
-      type = "git";
-      url = "https://gopkg.in/yaml.v2";
-      rev = "287cf08546ab";
-      sha256 = "15502klds9wwv567vclb9kx95gs8lnyzn4ybsk6l9fc7a67lk831";
-    };
-  }
-]
diff --git a/pkgs/applications/radio/chirp/default.nix b/pkgs/applications/radio/chirp/default.nix
index 1c6d0478f76c..aeadf49f8989 100644
--- a/pkgs/applications/radio/chirp/default.nix
+++ b/pkgs/applications/radio/chirp/default.nix
@@ -3,11 +3,11 @@
 
 stdenv.mkDerivation rec {
   pname = "chirp-daily";
-  version = "20190511";
+  version = "20190718";
 
   src = fetchurl {
     url = "https://trac.chirp.danplanet.com/chirp_daily/daily-${version}/${pname}-${version}.tar.gz";
-    sha256 = "1k5smkzkvbr4d8gbl1yczf2i5xrdkgk6i8pmwnlfghzcgy8n4jzj";
+    sha256 = "1zngdqqqrlm8qpv8dzinamhwq6rr8zcq7db3vb284wrq0jcvrry5";
   };
 
   nativeBuildInputs = [ makeWrapper ];
diff --git a/pkgs/applications/radio/fldigi/default.nix b/pkgs/applications/radio/fldigi/default.nix
index fd8c542fb42e..b9af3a712330 100644
--- a/pkgs/applications/radio/fldigi/default.nix
+++ b/pkgs/applications/radio/fldigi/default.nix
@@ -2,12 +2,12 @@
   libsamplerate, libpulseaudio, libXinerama, gettext, pkgconfig, alsaLib }:
 
 stdenv.mkDerivation rec {
-  version = "4.1.04";
+  version = "4.1.07";
   pname = "fldigi";
 
   src = fetchurl {
     url = "mirror://sourceforge/${pname}/${pname}-${version}.tar.gz";
-    sha256 = "0idv6yr5l5z1icziv1shpjqxhjlxmb6qkpwlmcxws15gkqs9rhc9";
+    sha256 = "1w11d6vbcvi3y7pps3rqb1ss3kxyyzd7nn1jv6fqns1wwsv68j6w";
   };
 
   buildInputs = [ libXinerama gettext hamlib fltk13 libjpeg libpng portaudio
diff --git a/pkgs/applications/radio/flrig/default.nix b/pkgs/applications/radio/flrig/default.nix
index 2b4a679accab..5bb561f14260 100644
--- a/pkgs/applications/radio/flrig/default.nix
+++ b/pkgs/applications/radio/flrig/default.nix
@@ -6,12 +6,12 @@
 }:
 
 stdenv.mkDerivation rec {
-  version = "1.3.45";
+  version = "1.3.47";
   pname = "flrig";
 
   src = fetchurl {
     url = "mirror://sourceforge/fldigi/${pname}-${version}.tar.gz";
-    sha256 = "14rnyqwlk35j2027l7hxfig6v7j7302w4vsvx0l33b782i8phs2v";
+    sha256 = "1xih3ik5dssa40lx48228pcrds8r7xmd8rmk2fcr1mw6apw6q141";
   };
 
   buildInputs = [
diff --git a/pkgs/applications/radio/wsjtx/default.nix b/pkgs/applications/radio/wsjtx/default.nix
index 6e287b571d75..212f93fb093d 100644
--- a/pkgs/applications/radio/wsjtx/default.nix
+++ b/pkgs/applications/radio/wsjtx/default.nix
@@ -1,22 +1,22 @@
 { stdenv, fetchurl, asciidoc, asciidoctor, autoconf, automake, cmake,
-  docbook_xsl, fftw, fftwFloat, gfortran, libtool, qtbase,
-  qtmultimedia, qtserialport, texinfo, libusb1 }:
+  docbook_xsl, fftw, fftwFloat, gfortran, libtool, libusb1, qtbase,
+  qtmultimedia, qtserialport, qttools, texinfo }:
 
 stdenv.mkDerivation rec {
   name = "wsjtx-${version}";
-  version = "2.0.1";
+  version = "2.1.0";
 
   # This is a "superbuild" tarball containing both wsjtx and a hamlib fork
   src = fetchurl {
     url = "http://physics.princeton.edu/pulsar/k1jt/wsjtx-${version}.tgz";
-    sha256 = "1kd0w57i9d9srbbfacza491vah8wa8100zjzzwqwdv70yy9qzw8q";
+    sha256 = "04flhyfw0djnnbrzh3f5lx06bnn92khchz3bmswk8if8n8j58v4y";
   };
 
   # Hamlib builds with autotools, wsjtx builds with cmake
   # Omitting pkgconfig because it causes issues locating the built hamlib
   nativeBuildInputs = [
     asciidoc asciidoctor autoconf automake cmake docbook_xsl gfortran libtool
-    texinfo
+    qttools texinfo
   ];
   buildInputs = [ fftw fftwFloat libusb1 qtbase qtmultimedia qtserialport ];
 
@@ -29,8 +29,8 @@ stdenv.mkDerivation rec {
   meta = with stdenv.lib; {
     description = "Weak-signal digital communication modes for amateur radio";
     longDescription = ''
-      WSJT-X implements communication protocols or "modes" called FT8, JT4, JT9,
-      JT65, QRA64, ISCAT, MSK144, and WSPR, as well as one called Echo for
+      WSJT-X implements communication protocols or "modes" called FT4, FT8, JT4,
+      JT9, JT65, QRA64, ISCAT, MSK144, and WSPR, as well as one called Echo for
       detecting and measuring your own radio signals reflected from the Moon.
       These modes were all designed for making reliable, confirmed ham radio
       contacts under extreme weak-signal conditions.
@@ -39,6 +39,6 @@ stdenv.mkDerivation rec {
     # Older licenses are for the statically-linked hamlib
     license = with licenses; [ gpl3Plus gpl2Plus lgpl21Plus ];
     platforms = platforms.linux;
-    maintainers = [ maintainers.lasandell ];
+    maintainers = with maintainers; [ lasandell ];
   };
 }
diff --git a/pkgs/applications/radio/wsjtx/wsjtx.patch b/pkgs/applications/radio/wsjtx/wsjtx.patch
index e92b420e58a4..fd7c40fdc13d 100644
--- a/pkgs/applications/radio/wsjtx/wsjtx.patch
+++ b/pkgs/applications/radio/wsjtx/wsjtx.patch
@@ -2,11 +2,12 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt
 index 3e7e816b..e7dbb14a 100644
 --- a/CMakeLists.txt
 +++ b/CMakeLists.txt
-@@ -860,6 +860,7 @@ find_package (Qt5Widgets 5 REQUIRED)
- find_package (Qt5Multimedia 5 REQUIRED)
- find_package (Qt5PrintSupport 5 REQUIRED)
- find_package (Qt5Sql 5 REQUIRED)
-+find_package (Qt5SerialPort 5 REQUIRED)
+@@ -885,6 +885,6 @@
+ #
+ 
+ # Widgets finds its own dependencies.
+-find_package (Qt5 COMPONENTS Widgets Multimedia PrintSupport Sql LinguistTools REQUIRED)
++find_package (Qt5 COMPONENTS Widgets Multimedia PrintSupport Sql LinguistTools SerialPort REQUIRED)
  
  if (WIN32)
    add_definitions (-DQT_NEEDS_QTMAIN)
diff --git a/pkgs/applications/science/math/sage/sage-tests.nix b/pkgs/applications/science/math/sage/sage-tests.nix
index 3e3c32b2c8da..591fa192d563 100644
--- a/pkgs/applications/science/math/sage/sage-tests.nix
+++ b/pkgs/applications/science/math/sage/sage-tests.nix
@@ -3,7 +3,7 @@
 , sage-with-env
 , makeWrapper
 , files ? null # "null" means run all tests
-, longTests ? false # run tests marked as "long time" (roughly doubles runtime)
+, longTests ? true # run tests marked as "long time" (roughly doubles runtime)
 # Run as many tests as possible in approximately n seconds. This will give each
 # file to test a "time budget" and stop tests if it is exceeded. 300 is the
 # upstream default value.
diff --git a/pkgs/applications/science/misc/motu-client/default.nix b/pkgs/applications/science/misc/motu-client/default.nix
deleted file mode 100644
index d4367ef7e2d3..000000000000
--- a/pkgs/applications/science/misc/motu-client/default.nix
+++ /dev/null
@@ -1,23 +0,0 @@
-{ python27Packages, fetchurl, lib } :
-python27Packages.buildPythonApplication rec {
-  pname = "motu-client";
-  version = "1.5.00";
-
-  src = fetchurl {
-    url = "https://github.com/quiet-oceans/motuclient-setuptools/archive/${version}.tar.gz";
-    sha256 = "1iqsws3wa2gpb36ms21xmaxfi83i8p8cdya4cxpn4r47c8mz74x8";
-  };
-
-  meta = with lib; {
-    homepage = https://github.com/quiet-oceans/motuclient-setuptools;
-    description = "CLI to query oceanographic data to Motu servers";
-    longDescription = ''
-      Access data from (motu)[https://sourceforge.net/projects/cls-motu/] servers.
-      This is a refactored fork of the original release in order to simplify integration,
-      deployment and packaging. Upstream code can be found at
-      https://sourceforge.net/projects/cls-motu/ .
-    '';
-    license = licenses.lgpl3Plus;
-    maintainers = [ maintainers.lsix ];
-  };
-}
diff --git a/pkgs/applications/version-management/gitkraken/default.nix b/pkgs/applications/version-management/gitkraken/default.nix
index ffca24ab27d1..5b7fc119b5b3 100644
--- a/pkgs/applications/version-management/gitkraken/default.nix
+++ b/pkgs/applications/version-management/gitkraken/default.nix
@@ -3,6 +3,7 @@
 , libX11, libXi, libxcb, libXext, libXcursor, glib, libXScrnSaver, libxkbfile, libXtst
 , nss, nspr, cups, fetchurl, expat, gdk-pixbuf, libXdamage, libXrandr, dbus
 , dpkg, makeDesktopItem, openssl, wrapGAppsHook, hicolor-icon-theme, at-spi2-atk, libuuid
+, e2fsprogs, krb5
 }:
 
 with stdenv.lib;
@@ -12,11 +13,11 @@ let
 in
 stdenv.mkDerivation rec {
   name = "gitkraken-${version}";
-  version = "6.0.0";
+  version = "6.1.1";
 
   src = fetchurl {
     url = "https://release.axocdn.com/linux/GitKraken-v${version}.deb";
-    sha256 = "1ykjdnzl34pqr6dhfnswix44i412c7gcba1pk95a8670wmc29a1f";
+    sha256 = "1ks8dscidqzmxy650xda6gvqg04iwidanidlsmgsi8365iqxvb1k";
   };
 
   libPath = makeLibraryPath [
@@ -55,6 +56,8 @@ stdenv.mkDerivation rec {
     openssl
     at-spi2-atk
     libuuid
+    e2fsprogs
+    krb5
   ];
 
   desktopItem = makeDesktopItem {
diff --git a/pkgs/applications/version-management/subversion/default.nix b/pkgs/applications/version-management/subversion/default.nix
index 81949f951069..a203e63b215d 100644
--- a/pkgs/applications/version-management/subversion/default.nix
+++ b/pkgs/applications/version-management/subversion/default.nix
@@ -123,8 +123,8 @@ in {
   };
 
   subversion = common {
-    version = "1.12.0";
-    sha256 = "1prfbrd1jnndb5fcsvwnzvdi7c0bpirb6pmfq03w21x0v1rprbkz";
+    version = "1.12.2";
+    sha256 = "0wgpw3kzsiawzqk4y0xgh1z93kllxydgv4lsviim45y5wk4bbl1v";
     extraBuildInputs = [ lz4 utf8proc ];
   };
 }