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-rw-r--r--pkgs/applications/science/math/eigenmath/default.nix6
-rw-r--r--pkgs/applications/science/misc/openrefine/default.nix1
-rw-r--r--pkgs/applications/science/misc/snakemake/default.nix4
3 files changed, 6 insertions, 5 deletions
diff --git a/pkgs/applications/science/math/eigenmath/default.nix b/pkgs/applications/science/math/eigenmath/default.nix
index e23d252e3f27..c43add48fcb6 100644
--- a/pkgs/applications/science/math/eigenmath/default.nix
+++ b/pkgs/applications/science/math/eigenmath/default.nix
@@ -7,13 +7,13 @@
 
 stdenv.mkDerivation rec {
   pname = "eigenmath";
-  version = "unstable-2024-01-23";
+  version = "unstable-2024-02-04";
 
   src = fetchFromGitHub {
     owner = "georgeweigt";
     repo = pname;
-    rev = "1d55696b742fee0b4ef8e39b7a420c00c2f1e329";
-    hash = "sha256-AQdCFKDUWfNKxZoWp82DdxUA2GiMGWyuyh7Fkofm9kc=";
+    rev = "3e37263611e181e2927d63b97b7656790c7f4fe1";
+    hash = "sha256-gjmz9Ma7OLQyIry6i2HMNy4Ai5Wh5NUzDKPO2a9Hp+s=";
   };
 
   checkPhase = let emulator = stdenv.hostPlatform.emulator buildPackages; in ''
diff --git a/pkgs/applications/science/misc/openrefine/default.nix b/pkgs/applications/science/misc/openrefine/default.nix
index fafdcb03ec03..8e3ea473d113 100644
--- a/pkgs/applications/science/misc/openrefine/default.nix
+++ b/pkgs/applications/science/misc/openrefine/default.nix
@@ -132,5 +132,6 @@ in maven'.buildMavenPackage {
       binaryBytecode  # maven dependencies
     ];
     broken = stdenv.isDarwin;  # builds, doesn't run
+    mainProgram = "refine";
   };
 }
diff --git a/pkgs/applications/science/misc/snakemake/default.nix b/pkgs/applications/science/misc/snakemake/default.nix
index 8590334449be..ba9cfb41f09c 100644
--- a/pkgs/applications/science/misc/snakemake/default.nix
+++ b/pkgs/applications/science/misc/snakemake/default.nix
@@ -6,14 +6,14 @@
 
 python3.pkgs.buildPythonApplication rec {
   pname = "snakemake";
-  version = "8.3.2";
+  version = "8.4.4";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "snakemake";
     repo = pname;
     rev = "refs/tags/v${version}";
-    hash = "sha256-urC8IVfliVzyWu7zqZN5EI6d3vXz80vHPhQaKBzTEVA=";
+    hash = "sha256-d3pUVhn9oi1ILDR4sfRh6HypbDn2JZMha27h0twixPc=";
     # https://github.com/python-versioneer/python-versioneer/issues/217
     postFetch = ''
       sed -i "$out"/snakemake/_version.py -e 's#git_refnames = ".*"#git_refnames = " (tag: v${version})"#'