1 files changed, 34 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/star/default.nix b/nixpkgs/pkgs/applications/science/biology/star/default.nix
new file mode 100644
index 000000000000..4d1d60469f0e
--- /dev/null
+++ b/nixpkgs/pkgs/applications/science/biology/star/default.nix
@@ -0,0 +1,34 @@
+{ stdenv, fetchFromGitHub, zlib }:
+
+stdenv.mkDerivation rec {
+  name = "star-${version}";
+  version = "2.7.0a";
+
+  src = fetchFromGitHub {
+    repo = "STAR";
+    owner = "alexdobin";
+    rev = version;
+    sha256 = "1yx28gra6gqdx1ps5y8mpdinsn8r0dhsc2m3gcvjfrk71i9yhd6l";
+  };
+
+  sourceRoot = "source/source";
+  
+  postPatch = "sed 's:/bin/rm:rm:g' -i Makefile";
+  
+  buildInputs = [ zlib ];
+  
+  buildPhase = "make STAR STARlong";
+
+  installPhase = ''
+    mkdir -p $out/bin
+    cp STAR STARlong $out/bin
+  '';
+  
+  meta = with stdenv.lib; {
+    description = "Spliced Transcripts Alignment to a Reference";
+    homepage = https://github.com/alexdobin/STAR;
+    license = licenses.gpl3Plus;
+    platforms = platforms.linux;
+    maintainers = [ maintainers.arcadio ];
+  };
+}