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-rw-r--r--nixpkgs/pkgs/applications/science/biology/niftyseg/default.nix25
1 files changed, 25 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/niftyseg/default.nix b/nixpkgs/pkgs/applications/science/biology/niftyseg/default.nix
new file mode 100644
index 000000000000..0fd658b0addc
--- /dev/null
+++ b/nixpkgs/pkgs/applications/science/biology/niftyseg/default.nix
@@ -0,0 +1,25 @@
+{ lib, stdenv, fetchFromGitHub, cmake, eigen, zlib }:
+
+stdenv.mkDerivation rec {
+  pname   = "niftyseg";
+  version = "1.0";
+
+  src = fetchFromGitHub {
+    owner = "KCL-BMEIS";
+    repo = "NiftySeg";
+    rev = "v${version}";
+    sha256 = "sha256-FDthq1ild9XOw3E3O7Lpfn6hBF1Frhv1NxfEA8500n8=";
+  };
+
+  nativeBuildInputs = [ cmake ];
+  buildInputs = [ eigen zlib ];
+
+  meta = with lib; {
+    homepage = "http://cmictig.cs.ucl.ac.uk/research/software/software-nifty/niftyseg";
+    description = "Software for medical image segmentation, bias field correction, and cortical thickness calculation";
+    maintainers = with maintainers; [ bcdarwin ];
+    platforms = platforms.unix;
+    license   = licenses.bsd3;
+  };
+
+}