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-rw-r--r--nixpkgs/pkgs/applications/science/biology/mrbayes/default.nix29
1 files changed, 29 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/mrbayes/default.nix b/nixpkgs/pkgs/applications/science/biology/mrbayes/default.nix
new file mode 100644
index 000000000000..1dd92af58eb1
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+++ b/nixpkgs/pkgs/applications/science/biology/mrbayes/default.nix
@@ -0,0 +1,29 @@
+{stdenv, fetchurl, readline}:
+
+stdenv.mkDerivation rec {
+  # FIXME: replace Makefile so we can build MPI & MAC support
+
+  name = "mrbayes-3.1.2";
+  src = fetchurl {
+    url = "mirror://sourceforge/mrbayes/${name}.tar.gz";
+    sha256 = "1x7j8ca5wjrqrxmcpvd375ydm3s2pbkzykv8xfhg1jc037g560n6";
+  };
+  builder = ./builder.sh;
+  buildInputs = [readline];
+
+  meta = {
+    description     = "Bayesian Inference of Phylogeny";
+    longDescription = ''
+      Bayesian inference of phylogeny is based upon a
+      quantity called the posterior probability distribution of trees, which is
+      the probability of a tree conditioned on the observations. The conditioning
+      is accomplished using Bayes's theorem. The posterior probability
+      distribution of trees is impossible to calculate analytically; instead,
+      MrBayes uses a simulation technique called Markov chain Monte Carlo (or
+      MCMC) to approximate the posterior probabilities of trees.
+    '';
+    license     = "GPL2";
+    homepage    = http://mrbayes.csit.fsu.edu/;
+    platforms = stdenv.lib.platforms.linux;
+  };
+}