1 files changed, 36 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/minc-tools/default.nix b/nixpkgs/pkgs/applications/science/biology/minc-tools/default.nix
new file mode 100644
index 000000000000..3dece25915b4
--- /dev/null
+++ b/nixpkgs/pkgs/applications/science/biology/minc-tools/default.nix
@@ -0,0 +1,36 @@
+{ lib, stdenv, fetchFromGitHub, cmake, makeWrapper, flex, bison, perl, TextFormat,
+  libminc, libjpeg, nifticlib, zlib }:
+
+stdenv.mkDerivation rec {
+  pname   = "minc-tools";
+  version = "unstable-2020-07-25";
+
+  src = fetchFromGitHub {
+    owner  = "BIC-MNI";
+    repo   = pname;
+    rev    = "fb0a68a07d281e4e099c5d54df29925240de14c1";
+    sha256 = "0zcv2sdj3k6k0xjqdq8j5bxq8smm48dzai90vwsmz8znmbbm6kvw";
+  };
+
+  nativeBuildInputs = [ cmake flex bison makeWrapper ];
+  buildInputs = [ libminc libjpeg nifticlib zlib ];
+  propagatedBuildInputs = [ perl TextFormat ];
+
+  cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake"
+                 "-DZNZ_INCLUDE_DIR=${nifticlib}/include/nifti"
+                 "-DNIFTI_INCLUDE_DIR=${nifticlib}/include/nifti" ];
+
+  postFixup = ''
+    for prog in minccomplete minchistory mincpik; do
+      wrapProgram $out/bin/$prog --prefix PERL5LIB : $PERL5LIB
+    done
+  '';
+
+  meta = with lib; {
+    homepage = "https://github.com/BIC-MNI/minc-tools";
+    description = "Command-line utilities for working with MINC files";
+    maintainers = with maintainers; [ bcdarwin ];
+    platforms = platforms.unix;
+    license   = licenses.free;
+  };
+}