diff options
Diffstat (limited to 'nixpkgs/pkgs/applications/science/biology/kssd')
-rw-r--r-- | nixpkgs/pkgs/applications/science/biology/kssd/default.nix | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/kssd/default.nix b/nixpkgs/pkgs/applications/science/biology/kssd/default.nix new file mode 100644 index 000000000000..34d997252f5b --- /dev/null +++ b/nixpkgs/pkgs/applications/science/biology/kssd/default.nix @@ -0,0 +1,38 @@ +{ lib, stdenv, fetchFromGitHub, fetchpatch, zlib, automake, autoconf, libtool }: + +stdenv.mkDerivation rec { + pname = "kssd"; + version = "1.1"; + + src = fetchFromGitHub { + owner = "yhg926"; + repo = "public_kssd"; + rev = "v${version}"; + sha256 = "sha256-8jzYqo9LXF66pQ1EIusm+gba2VbTYpJz2K3NVlA3QxY="; + }; + + patches = [ + # Pull upstream patch for -fno-common toolchain support: + # https://github.com/yhg926/public_kssd/pull/9 + (fetchpatch { + name = "fno-common.patch"; + url = "https://github.com/yhg926/public_kssd/commit/cdd1e8aae256146f5913a3b4c723b638d53bdf27.patch"; + sha256 = "sha256-HhaTRqPfKR+ouh0PwEH6u22pbuqbX2OypRzw8BXm0W4="; + }) + ]; + + nativeBuildInputs = [ autoconf automake ]; + buildInputs = [ zlib libtool ]; + + installPhase = '' + install -vD kssd $out/bin/kssd + ''; + + meta = with lib; { + description = "K-mer substring space decomposition"; + license = licenses.asl20; + homepage = "https://github.com/yhg926/public_kssd"; + maintainers = with maintainers; [ unode ]; + platforms = [ "x86_64-linux" ]; + }; +} |