diff options
Diffstat (limited to 'nixpkgs/pkgs/applications/science/biology/kallisto/default.nix')
-rw-r--r-- | nixpkgs/pkgs/applications/science/biology/kallisto/default.nix | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/kallisto/default.nix b/nixpkgs/pkgs/applications/science/biology/kallisto/default.nix new file mode 100644 index 000000000000..d80ffea9a780 --- /dev/null +++ b/nixpkgs/pkgs/applications/science/biology/kallisto/default.nix @@ -0,0 +1,25 @@ +{ stdenv, fetchFromGitHub, cmake, hdf5, zlib }: + +stdenv.mkDerivation rec { + name = "kallisto-${version}"; + version = "0.43.1"; + + src = fetchFromGitHub { + repo = "kallisto"; + owner = "pachterlab"; + rev = "v${version}"; + sha256 = "04697pf7jvy7vw126s1rn09q4iab9223jvb1nb0jn7ilwkq7pgwz"; + }; + + nativeBuildInputs = [ cmake ]; + + buildInputs = [ hdf5 zlib ]; + + meta = with stdenv.lib; { + description = "kallisto is a program for quantifying abundances of transcripts from RNA-Seq data"; + homepage = https://pachterlab.github.io/kallisto; + license = licenses.bsd2; + platforms = platforms.linux; + maintainers = [ maintainers.arcadio ]; + }; +} |