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-rw-r--r--nixpkgs/pkgs/applications/science/biology/emboss/default.nix30
1 files changed, 30 insertions, 0 deletions
diff --git a/nixpkgs/pkgs/applications/science/biology/emboss/default.nix b/nixpkgs/pkgs/applications/science/biology/emboss/default.nix
new file mode 100644
index 000000000000..d590a5da8a67
--- /dev/null
+++ b/nixpkgs/pkgs/applications/science/biology/emboss/default.nix
@@ -0,0 +1,30 @@
+{ lib, stdenv, fetchurl, readline, perl, libharu, libX11, libpng, libXt, zlib }:
+
+stdenv.mkDerivation rec {
+  pname = "emboss";
+  version = "6.6.0";
+
+  src = fetchurl {
+    url = "ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-${version}.tar.gz";
+    sha256 = "7184a763d39ad96bb598bfd531628a34aa53e474db9e7cac4416c2a40ab10c6e";
+  };
+
+  buildInputs = [ readline perl libharu libpng libX11 libXt zlib ];
+
+  configureFlags = [ "--with-hpdf=${libharu}" "--with-pngdriver=${zlib}" ];
+
+  postConfigure = ''
+    sed -i 's@$(bindir)/embossupdate@true@' Makefile
+  '';
+
+  meta = {
+    description = "The European Molecular Biology Open Software Suite";
+    longDescription = ''EMBOSS is a free Open Source software analysis package
+    specially developed for the needs of the molecular biology (e.g. EMBnet)
+    user community, including libraries. The software automatically copes with
+    data in a variety of formats and even allows transparent retrieval of
+    sequence data from the web.'';
+    license = lib.licenses.gpl2;
+    homepage = "https://emboss.sourceforge.net/";
+  };
+}