diff options
995 files changed, 21935 insertions, 8920 deletions
diff --git a/.editorconfig b/.editorconfig index 7b40ff1ff568..f5df33889e6b 100644 --- a/.editorconfig +++ b/.editorconfig @@ -26,3 +26,7 @@ indent_size = 4 # Match diffs, avoid to trim trailing whitespace [*.{diff,patch}] trim_trailing_whitespace = false + +# https://github.com/NixOS/nixpkgs/pull/39336#discussion_r183387754 +[.version] +insert_final_newline = false diff --git a/.version b/.version index 770bde1f44b3..c1b80a502792 100644 --- a/.version +++ b/.version @@ -1 +1 @@ -18.09 +18.09 \ No newline at end of file diff --git a/doc/configuration.xml b/doc/configuration.xml index 55c5ea809d35..5370265c53ad 100644 --- a/doc/configuration.xml +++ b/doc/configuration.xml @@ -14,6 +14,8 @@ true:</para> its <literal>meta.broken</literal> set to <literal>true</literal>.</para></listitem> + <listitem><para>The package isn't intended to run on the given system, as none of its <literal>meta.platforms</literal> match the given system.</para></listitem> + <listitem><para>The package's <literal>meta.license</literal> is set to a license which is considered to be unfree.</para></listitem> @@ -88,6 +90,42 @@ distributing the software.</para> </itemizedlist> </section> +<section xml:id="sec-allow-unsupported-system"> + <title>Installing packages on unsupported systems</title> + + + <para> + There are also two ways to try compiling a package which has been marked as unsuported for the given system. + </para> + + <itemizedlist> + <listitem><para> + For allowing the build of a broken package once, you can use an environment variable for a single invocation of the nix tools: + + <programlisting>$ export NIXPKGS_ALLOW_UNSUPPORTED_SYSTEM=1</programlisting> + </para></listitem> + + <listitem> + <para> + For permanently allowing broken packages to be built, you may add <literal>allowUnsupportedSystem = true;</literal> to your user's configuration file, like this: + +<programlisting> +{ + allowUnsupportedSystem = true; +} +</programlisting> + </para> + </listitem> + </itemizedlist> + + <para> + The difference between an a package being unsupported on some system and being broken is admittedly a bit fuzzy. + If a program <emphasis>ought</emphasis> to work on a certain platform, but doesn't, the platform should be included in <literal>meta.platforms</literal>, but marked as broken with e.g. <literal>meta.broken = !hostPlatform.isWindows</literal>. + Of course, this begs the question of what "ought" means exactly. + That is left to the package maintainer. + </para> +</section> + <section xml:id="sec-allow-unfree"> <title>Installing unfree packages</title> @@ -397,7 +435,7 @@ fi </para> </section> - + <section xml:id="sec-gnu-info-setup"> <title>GNU info setup</title> diff --git a/doc/languages-frameworks/haskell.section.md b/doc/languages-frameworks/haskell.section.md index 1623e0d276f2..3b8971c295bb 100644 --- a/doc/languages-frameworks/haskell.section.md +++ b/doc/languages-frameworks/haskell.section.md @@ -666,6 +666,56 @@ prefer one built with GHC 7.8.x in the first place. However, for users who cannot use GHC 7.10.x at all for some reason, the approach of downgrading to an older version might be useful. +### How to override packages in all compiler-specific package sets + +In the previous section we learned how to override a package in a single +compiler-specific package set. You may have some overrides defined that you want +to use across multiple package sets. To accomplish this you could use the +technique that we learned in the previous section by repeating the overrides for +all the compiler-specific package sets. For example: + +```nix +{ + packageOverrides = super: let self = super.pkgs; in + { + haskell = super.haskell // { + packages = super.haskell.packages // { + ghc784 = super.haskell.packages.ghc784.override { + overrides = self: super: { + my-package = ...; + my-other-package = ...; + }; + }; + ghc822 = super.haskell.packages.ghc784.override { + overrides = self: super: { + my-package = ...; + my-other-package = ...; + }; + }; + ... + }; + }; + }; +} +``` + +However there's a more convenient way to override all compiler-specific package +sets at once: + +```nix +{ + packageOverrides = super: let self = super.pkgs; in + { + haskell = super.haskell // { + packageOverrides = self: super: { + my-package = ...; + my-other-package = ...; + }; + }; + }; +} +``` + ### How to recover from GHC's infamous non-deterministic library ID bug GHC and distributed build farms don't get along well: diff --git a/doc/languages-frameworks/python.section.md b/doc/languages-frameworks/python.section.md index 0f871395854c..23ceb82eb31e 100644 --- a/doc/languages-frameworks/python.section.md +++ b/doc/languages-frameworks/python.section.md @@ -374,7 +374,7 @@ and `CFLAGS`. description = "A pythonic wrapper around FFTW, the FFT library, presenting a unified interface for all the supported transforms"; homepage = http://hgomersall.github.com/pyFFTW/; license = with licenses; [ bsd2 bsd3 ]; - maintainer = with maintainers; [ fridh ]; + maintainers = with maintainers; [ fridh ]; }; }; } diff --git a/doc/multiple-output.xml b/doc/multiple-output.xml index 2f23da8df01e..277d3d814136 100644 --- a/doc/multiple-output.xml +++ b/doc/multiple-output.xml @@ -36,10 +36,16 @@ <para>Here you find how to write a derivation that produces multiple outputs.</para> <para>In nixpkgs there is a framework supporting multiple-output derivations. It tries to cover most cases by default behavior. You can find the source separated in <<filename>nixpkgs/pkgs/build-support/setup-hooks/multiple-outputs.sh</filename>>; it's relatively well-readable. The whole machinery is triggered by defining the <varname>outputs</varname> attribute to contain the list of desired output names (strings).</para> <programlisting>outputs = [ "bin" "dev" "out" "doc" ];</programlisting> - <para>Often such a single line is enough. For each output an equally named environment variable is passed to the builder and contains the path in nix store for that output. By convention, the first output should contain the executable programs provided by the package as that output is used by Nix in string conversions, allowing references to binaries like <literal>${pkgs.perl}/bin/perl</literal> to always work. Typically you also want to have the main <varname>out</varname> output, as it catches any files that didn't get elsewhere.</para> - + <para>Often such a single line is enough. For each output an equally named environment variable is passed to the builder and contains the path in nix store for that output. Typically you also want to have the main <varname>out</varname> output, as it catches any files that didn't get elsewhere.</para> <note><para>There is a special handling of the <varname>debug</varname> output, described at <xref linkend="stdenv-separateDebugInfo" />.</para></note> + <section xml:id="multiple-output-file-binaries-first-convention"> + <title><quote>Binaries first</quote></title> + <para>A commonly adopted convention in <literal>nixpkgs</literal> is that executables provided by the package are contained within its first output. This convention allows the dependent packages to reference the executables provided by packages in a uniform manner. For instance, provided with the knowledge that the <literal>perl</literal> package contains a <literal>perl</literal> executable it can be referenced as <literal>${pkgs.perl}/bin/perl</literal> within a Nix derivation that needs to execute a Perl script.</para> + <para>The <literal>glibc</literal> package is a deliberate single exception to the <quote>binaries first</quote> convention. The <literal>glibc</literal> has <literal>libs</literal> as its first output allowing the libraries provided by <literal>glibc</literal> to be referenced directly (e.g. <literal>${stdenv.glibc}/lib/ld-linux-x86-64.so.2</literal>). The executables provided by <literal>glibc</literal> can be accessed via its <literal>bin</literal> attribute (e.g. <literal>${stdenv.glibc.bin}/bin/ldd</literal>).</para> + <para>The reason for why <literal>glibc</literal> deviates from the convention is because referencing a library provided by <literal>glibc</literal> is a very common operation among Nix packages. For instance, third-party executables packaged by Nix are typically patched and relinked with the relevant version of <literal>glibc</literal> libraries from Nix packages (please see the documentation on <link xlink:href="https://nixos.org/patchelf.html">patchelf</link> for more details).</para> + </section> + <section xml:id="multiple-output-file-type-groups"> <title>File type groups</title> <para>The support code currently recognizes some particular kinds of outputs and either instructs the build system of the package to put files into their desired outputs or it moves the files during the fixup phase. Each group of file types has an <varname>outputFoo</varname> variable specifying the output name where they should go. If that variable isn't defined by the derivation writer, it is guessed – a default output name is defined, falling back to other possibilities if the output isn't defined.</para> diff --git a/doc/reviewing-contributions.xml b/doc/reviewing-contributions.xml index d6f33ccd1cdb..7b017f0a8cc4 100644 --- a/doc/reviewing-contributions.xml +++ b/doc/reviewing-contributions.xml @@ -23,7 +23,9 @@ xlink:href="https://github.com/NixOS/nixpkgs/pulls?q=is%3Apr+is%3Aopen+sort%3Aupdated-desc">most recently</link> and the <link xlink:href="https://github.com/NixOS/nixpkgs/pulls?q=is%3Apr+is%3Aopen+sort%3Aupdated-asc">least - recently</link> updated pull-requests.</para> + recently</link> updated pull-requests. + We highly encourage looking at <link xlink:href="https://github.com/NixOS/nixpkgs/pulls?q=is%3Apr+is%3Aopen+review%3Anone+status%3Asuccess+-label%3A%222.status%3A+work-in-progress%22+no%3Aproject+no%3Aassignee+no%3Amilestone"> + this list of ready to merge, unreviewed pull requests</link>.</para> <para>When reviewing a pull request, please always be nice and polite. Controversial changes can lead to controversial opinions, but it is important diff --git a/lib/generators.nix b/lib/generators.nix index d1a8f6bf8dcd..c09384c00f57 100644 --- a/lib/generators.nix +++ b/lib/generators.nix @@ -143,18 +143,13 @@ rec { (This means fn is type Val -> String.) */ allowPrettyValues ? false }@args: v: with builtins; - if isInt v then toString v + let isPath = v: typeOf v == "path"; + in if isInt v then toString v else if isString v then ''"${libStr.escape [''"''] v}"'' else if true == v then "true" else if false == v then "false" - else if null == v then "null" - else if isFunction v then - let fna = lib.functionArgs v; - showFnas = concatStringsSep "," (libAttr.mapAttrsToList - (name: hasDefVal: if hasDefVal then "(${name})" else name) - fna); - in if fna == {} then "<λ>" - else "<λ:{${showFnas}}>" + else if null == v then "null" + else if isPath v then toString v else if isList v then "[ " + libStr.concatMapStringsSep " " (toPretty args) v + " ]" @@ -163,12 +158,21 @@ rec { if attrNames v == [ "__pretty" "val" ] && allowPrettyValues then v.__pretty v.val # TODO: there is probably a better representation? - else if v ? type && v.type == "derivation" then "<δ>" + else if v ? type && v.type == "derivation" then + "<δ:${v.name}>" + # "<δ:${concatStringsSep "," (builtins.attrNames v)}>" else "{ " + libStr.concatStringsSep " " (libAttr.mapAttrsToList (name: value: "${toPretty args name} = ${toPretty args value};") v) + " }" - else abort "generators.toPretty: should never happen (v = ${v})"; + else if isFunction v then + let fna = lib.functionArgs v; + showFnas = concatStringsSep "," (libAttr.mapAttrsToList + (name: hasDefVal: if hasDefVal then "(${name})" else name) + fna); + in if fna == {} then "<λ>" + else "<λ:{${showFnas}}>" + else abort "toPretty: should never happen (v = ${v})"; } diff --git a/lib/systems/default.nix b/lib/systems/default.nix index bd408e00bb14..e7346a538d35 100644 --- a/lib/systems/default.nix +++ b/lib/systems/default.nix @@ -44,6 +44,8 @@ rec { }; # Misc boolean options useAndroidPrebuilt = false; + useiOSPrebuilt = false; + isiPhoneSimulator = false; } // mapAttrs (n: v: v final.parsed) inspect.predicates // args; in assert final.useAndroidPrebuilt -> final.isAndroid; diff --git a/lib/systems/doubles.nix b/lib/systems/doubles.nix index 012a1786a3cc..c6618083ce72 100644 --- a/lib/systems/doubles.nix +++ b/lib/systems/doubles.nix @@ -26,7 +26,7 @@ in rec { none = []; - arm = filterDoubles predicates.isArm; + arm = filterDoubles predicates.isAarch32; aarch64 = filterDoubles predicates.isAarch64; x86 = filterDoubles predicates.isx86; i686 = filterDoubles predicates.isi686; diff --git a/lib/systems/for-meta.nix b/lib/systems/for-meta.nix index 43c0195c3f18..9e85cea3ad11 100644 --- a/lib/systems/for-meta.nix +++ b/lib/systems/for-meta.nix @@ -7,7 +7,7 @@ in rec { all = [ {} ]; # `{}` matches anything none = []; - arm = [ patterns.isArm ]; + arm = [ patterns.isAarch32 ]; aarch64 = [ patterns.isAarch64 ]; x86 = [ patterns.isx86 ]; i686 = [ patterns.isi686 ]; diff --git a/lib/systems/inspect.nix b/lib/systems/inspect.nix index d7fabf684b72..b87320594cab 100644 --- a/lib/systems/inspect.nix +++ b/lib/systems/inspect.nix @@ -9,8 +9,8 @@ rec { isx86_64 = { cpu = cpuTypes.x86_64; }; isPowerPC = { cpu = cpuTypes.powerpc; }; isx86 = { cpu = { family = "x86"; }; }; - isArm = { cpu = { family = "arm"; }; }; - isAarch64 = { cpu = { family = "aarch64"; }; }; + isAarch32 = { cpu = { family = "arm"; bits = 32; }; }; + isAarch64 = { cpu = { family = "arm"; bits = 64; }; }; isMips = { cpu = { family = "mips"; }; }; isRiscV = { cpu = { family = "riscv"; }; }; isWasm = { cpu = { family = "wasm"; }; }; @@ -41,6 +41,9 @@ rec { isEfi = map (family: { cpu.family = family; }) [ "x86" "arm" "aarch64" ]; + + # Deprecated + isArm = isAarch32; }; matchAnyAttrs = patterns: diff --git a/lib/systems/parse.nix b/lib/systems/parse.nix index 641a7f5d7584..018fd172e687 100644 --- a/lib/systems/parse.nix +++ b/lib/systems/parse.nix @@ -34,7 +34,7 @@ rec { ################################################################################ - types.openSignifiantByte = mkOptionType { + types.openSignificantByte = mkOptionType { name = "significant-byte"; description = "Endianness"; merge = mergeOneOption; @@ -42,7 +42,7 @@ rec { types.significantByte = enum (attrValues significantBytes); - significantBytes = setTypes types.openSignifiantByte { + significantBytes = setTypes types.openSignificantByte { bigEndian = {}; littleEndian = {}; }; @@ -72,7 +72,7 @@ rec { armv6l = { bits = 32; significantByte = littleEndian; family = "arm"; }; armv7a = { bits = 32; significantByte = littleEndian; family = "arm"; }; armv7l = { bits = 32; significantByte = littleEndian; family = "arm"; }; - aarch64 = { bits = 64; significantByte = littleEndian; family = "aarch64"; }; + aarch64 = { bits = 64; significantByte = littleEndian; family = "arm"; }; i686 = { bits = 32; significantByte = littleEndian; family = "x86"; }; x86_64 = { bits = 64; significantByte = littleEndian; family = "x86"; }; mips = { bits = 32; significantByte = bigEndian; family = "mips"; }; @@ -201,7 +201,7 @@ rec { ################################################################################ - types.system = mkOptionType { + types.parsedPlatform = mkOptionType { name = "system"; description = "fully parsed representation of llvm- or nix-style platform tuple"; merge = mergeOneOption; @@ -215,7 +215,7 @@ rec { isSystem = isType "system"; mkSystem = components: - assert types.system.check components; + assert types.parsedPlatform.check components; setType "system" components; mkSkeletonFromList = l: { diff --git a/lib/tests/misc.nix b/lib/tests/misc.nix index 5f19dd63f2d8..c683df7d7ca3 100644 --- a/lib/tests/misc.nix +++ b/lib/tests/misc.nix @@ -317,7 +317,8 @@ runTests { expr = mapAttrs (const (generators.toPretty {})) rec { int = 42; bool = true; - string = "fnord"; + string = ''fno"rd''; + path = /. + "/foo"; # toPath returns a string null_ = null; function = x: x; functionArgs = { arg ? 4, foo }: arg; @@ -328,13 +329,14 @@ runTests { expected = rec { int = "42"; bool = "true"; - string = "\"fnord\""; + string = ''"fno\"rd"''; + path = "/foo"; null_ = "null"; function = "<λ>"; functionArgs = "<λ:{(arg),foo}>"; list = "[ 3 4 ${function} [ false ] ]"; attrs = "{ \"foo\" = null; \"foo bar\" = \"baz\"; }"; - drv = "<δ>"; + drv = "<δ:test>"; }; }; diff --git a/maintainers/maintainer-list.nix b/maintainers/maintainer-list.nix index 5f47c859a8ec..0f05c363a656 100644 --- a/maintainers/maintainer-list.nix +++ b/maintainers/maintainer-list.nix @@ -28,6 +28,11 @@ github = "AndersonTorres"; name = "Anderson Torres"; }; + Anton-Latukha = { + email = "anton.latuka+nixpkgs@gmail.com"; + github = "Anton-Latukha"; + name = "Anton Latukha"; + }; Baughn = { email = "sveina@gmail.com"; github = "Baughn"; @@ -305,6 +310,16 @@ github = "akru"; name = "Alexander Krupenkin "; }; + alexchapman = { + name = "Alex Chapman"; + email = "alex@farfromthere.net"; + github = "AJChapman"; + }; + alexfmpe = { + email = "alexandre.fmp.esteves@gmail.com"; + github = "alexfmpe"; + name = "Alexandre Esteves"; + }; alexvorobiev = { email = "alexander.vorobiev@gmail.com"; github = "alexvorobiev"; @@ -582,6 +597,11 @@ github = "bergey"; name = "Daniel Bergey"; }; + bfortz = { + email = "bernard.fortz@gmail.com"; + github = "bfortz"; + name = "Bernard Fortz"; + }; bgamari = { email = "ben@smart-cactus.org"; github = "bgamari"; @@ -700,6 +720,11 @@ github = "canndrew"; name = "Andrew Cann"; }; + carlosdagos = { + email = "m@cdagostino.io"; + github = "carlosdagos"; + name = "Carlos D'Agostino"; + }; carlsverre = { email = "accounts@carlsverre.com"; github = "carlsverre"; @@ -1716,7 +1741,7 @@ name = "Jeffrey David Johnson"; }; jensbin = { - email = "jensbin@protonmail.com"; + email = "jensbin+git@pm.me"; github = "jensbin"; name = "Jens Binkert"; }; @@ -1966,6 +1991,11 @@ github = "kragniz"; name = "Louis Taylor"; }; + krav = { + email = "kristoffer@microdisko.no"; + github = "krav"; + name = "Kristoffer Thømt Ravneberg"; + }; kristoff3r = { email = "k.soeholm@gmail.com"; github = "kristoff3r"; @@ -2645,6 +2675,11 @@ github = "nmattia"; name = "Nicolas Mattia"; }; + nocent = { + email = "nocent@protonmail.ch"; + github = "nocent"; + name = "nocent"; + }; nocoolnametom = { email = "nocoolnametom@gmail.com"; github = "nocoolnametom"; @@ -3406,6 +3441,11 @@ github = "grwlf"; name = "Sergey Mironov"; }; + sna = { + email = "abouzahra.9@wright.edu"; + github = "s-na"; + name = "S. Nordin Abouzahra"; + }; snyh = { email = "snyh@snyh.org"; github = "snyh"; @@ -3451,6 +3491,11 @@ github = "spwhitt"; name = "Spencer Whitt"; }; + srghma = { + email = "srghma@gmail.com"; + github = "srghma"; + name = "Sergei Khoma"; + }; srhb = { email = "sbrofeldt@gmail.com"; github = "srhb"; @@ -3971,6 +4016,11 @@ github = "womfoo"; name = "Kranium Gikos Mendoza"; }; + worldofpeace = { + email = "worldofpeace@users.noreply.github.com"; + github = "worldofpeace"; + name = "Worldofpeace"; + }; wscott = { email = "wsc9tt@gmail.com"; github = "wscott"; @@ -4135,9 +4185,4 @@ github = "zzamboni"; name = "Diego Zamboni"; }; - srghma = { - email = "srghma@gmail.com"; - github = "srghma"; - name = "Sergei Khoma"; - }; } diff --git a/maintainers/scripts/hydra-eval-failures.py b/maintainers/scripts/hydra-eval-failures.py index d0bd1913ba8a..23669502e46d 100755 --- a/maintainers/scripts/hydra-eval-failures.py +++ b/maintainers/scripts/hydra-eval-failures.py @@ -1,5 +1,5 @@ #!/usr/bin/env nix-shell -#!nix-shell -i python -p pythonFull pythonPackages.requests pythonPackages.pyquery pythonPackages.click +#!nix-shell -i python3 -p 'python3.withPackages(ps: with ps; [ requests pyquery click ])' # To use, just execute this script with --help to display help. @@ -16,7 +16,7 @@ maintainers_json = subprocess.check_output([ 'nix-instantiate', '-E', 'import ./maintainers/maintainer-list.nix {}', '--eval', '--json' ]) maintainers = json.loads(maintainers_json) -MAINTAINERS = {v: k for k, v in maintainers.iteritems()} +MAINTAINERS = {v: k for k, v in maintainers.items()} def get_response_text(url): @@ -45,6 +45,17 @@ def get_maintainers(attr_name): except: return [] +def print_build(table_row): + a = pq(table_row)('a')[1] + print("- [ ] [{}]({})".format(a.text, a.get('href')), flush=True) + + maintainers = get_maintainers(a.text) + if maintainers: + print(" - maintainers: {}".format(", ".join(map(lambda u: '@' + u, maintainers)))) + # TODO: print last three persons that touched this file + # TODO: pinpoint the diff that broke this build, or maybe it's transient or maybe it never worked? + + sys.stdout.flush() @click.command() @click.option( @@ -73,23 +84,17 @@ def cli(jobset): # TODO: aborted evaluations # TODO: dependency failed without propagated builds + print('\nFailures:') for tr in d('img[alt="Failed"]').parents('tr'): - a = pq(tr)('a')[1] - print("- [ ] [{}]({})".format(a.text, a.get('href'))) + print_build(tr) - sys.stdout.flush() - - maintainers = get_maintainers(a.text) - if maintainers: - print(" - maintainers: {}".format(", ".join(map(lambda u: '@' + u, maintainers)))) - # TODO: print last three persons that touched this file - # TODO: pinpoint the diff that broke this build, or maybe it's transient or maybe it never worked? - - sys.stdout.flush() + print('\nDependency failures:') + for tr in d('img[alt="Dependency failed"]').parents('tr'): + print_build(tr) if __name__ == "__main__": try: cli() - except: + except Exception as e: import pdb;pdb.post_mortem() diff --git a/nixos/doc/manual/installation/installing-usb.xml b/nixos/doc/manual/installation/installing-usb.xml index 122a4745f194..d68cd6162632 100644 --- a/nixos/doc/manual/installation/installing-usb.xml +++ b/nixos/doc/manual/installation/installing-usb.xml @@ -51,7 +51,7 @@ ISO, copy its contents verbatim to your drive, then either: <listitem> <para>If you want to load the contents of the ISO to ram after bootin (So you can remove the stick after bootup) you can append the parameter - <literal>copytoram</literal>to the <literal>options</literal> field.</para> + <literal>copytoram</literal> to the <literal>options</literal> field.</para> </listitem> </itemizedlist> </para> diff --git a/nixos/doc/manual/installation/installing.xml b/nixos/doc/manual/installation/installing.xml index e20b6574b725..1f09704bce53 100644 --- a/nixos/doc/manual/installation/installing.xml +++ b/nixos/doc/manual/installation/installing.xml @@ -115,23 +115,17 @@ for a UEFI installation is by and large the same as a BIOS installation. The dif <varlistentry><term>UEFI systems</term> <listitem><para>For creating boot partitions: <command>mkfs.fat</command>. Again it’s recommended to assign a - label to the boot partition: <option>-L + label to the boot partition: <option>-n <replaceable>label</replaceable></option>. For example: <screen> -# mkfs.fat -F 32 -L boot /dev/sda3</screen> +# mkfs.fat -F 32 -n boot /dev/sda3</screen> </para></listitem></varlistentry></variablelist></listitem> <listitem><para>For creating LVM volumes, the LVM commands, e.g., - -<screen> -# pvcreate /dev/sda1 /dev/sdb1 -# vgcreate MyVolGroup /dev/sda1 /dev/sdb1 -# lvcreate --size 2G --name bigdisk MyVolGroup -# lvcreate --size 1G --name smalldisk MyVolGroup</screen> - - </para></listitem> + <command>pvcreate</command>, <command>vgcreate</command>, and + <command>lvcreate</command>.</para></listitem> <listitem><para>For creating software RAID devices, use <command>mdadm</command>.</para></listitem> @@ -155,6 +149,7 @@ for a UEFI installation is by and large the same as a BIOS installation. The dif <listitem><para>Mount the boot file system on <filename>/mnt/boot</filename>, e.g. <screen> +# mkdir -p /mnt/boot # mount /dev/disk/by-label/boot /mnt/boot </screen> @@ -366,8 +361,9 @@ drive (here <filename>/dev/sda</filename>). <xref linkend="ex-config" # mkfs.ext4 -L nixos /dev/sda1 # mkswap -L swap /dev/sda2 # swapon /dev/sda2 -# mkfs.fat -F 32 -L boot /dev/sda3 # <lineannotation>(for UEFI systems only)</lineannotation> +# mkfs.fat -F 32 -n boot /dev/sda3 # <lineannotation>(for UEFI systems only)</lineannotation> # mount /dev/disk/by-label/nixos /mnt +# mkdir -p /mnt/boot # <lineannotation>(for UEFI systems only)</lineannotation> # mount /dev/disk/by-label/boot /mnt/boot # <lineannotation>(for UEFI systems only)</lineannotation> # nixos-generate-config --root /mnt # nano /mnt/etc/nixos/configuration.nix diff --git a/nixos/doc/manual/man-nixos-build-vms.xml b/nixos/doc/manual/man-nixos-build-vms.xml index 878ebee05273..f4b59a7c6d4b 100644 --- a/nixos/doc/manual/man-nixos-build-vms.xml +++ b/nixos/doc/manual/man-nixos-build-vms.xml @@ -40,7 +40,7 @@ points to the generated virtual network. test1 = {pkgs, config, ...}: { services.openssh.enable = true; - nixpkgs.system = "i686-linux"; + nixpkgs.localSystem.system = "i686-linux"; deployment.targetHost = "test1.example.net"; # Other NixOS options @@ -51,7 +51,7 @@ points to the generated virtual network. services.openssh.enable = true; services.httpd.enable = true; environment.systemPackages = [ pkgs.lynx ]; - nixpkgs.system = "x86_64-linux"; + nixpkgs.localSystem.system = "x86_64-linux"; deployment.targetHost = "test2.example.net"; # Other NixOS options @@ -66,7 +66,7 @@ In each NixOS configuration, two attributes have a special meaning. The <varname>deployment.targetHost</varname> specifies the address (domain name or IP address) of the system which is used by <command>ssh</command> to perform -remote deployment operations. The <varname>nixpkgs.system</varname> +remote deployment operations. The <varname>nixpkgs.localSystem.system</varname> attribute can be used to specify an architecture for the target machine, such as <varname>i686-linux</varname> which builds a 32-bit NixOS configuration. Omitting this property will build the configuration diff --git a/nixos/lib/eval-config.nix b/nixos/lib/eval-config.nix index 2e7971cca810..97c79487df4c 100644 --- a/nixos/lib/eval-config.nix +++ b/nixos/lib/eval-config.nix @@ -26,7 +26,7 @@ , lib ? import ../../lib }: -let extraArgs_ = extraArgs; pkgs_ = pkgs; system_ = system; +let extraArgs_ = extraArgs; pkgs_ = pkgs; extraModules = let e = builtins.getEnv "NIXOS_EXTRA_MODULE_PATH"; in if e == "" then [] else [(import (builtins.toPath e))]; in @@ -36,7 +36,7 @@ let _file = ./eval-config.nix; key = _file; config = { - nixpkgs.system = lib.mkDefault system_; + nixpkgs.localSystem = lib.mkDefault { inherit system; }; _module.args.pkgs = lib.mkIf (pkgs_ != null) (lib.mkForce pkgs_); }; }; diff --git a/nixos/lib/qemu-flags.nix b/nixos/lib/qemu-flags.nix index fcdcbf1b0077..e4c95ebdfb0d 100644 --- a/nixos/lib/qemu-flags.nix +++ b/nixos/lib/qemu-flags.nix @@ -9,7 +9,7 @@ ]; qemuSerialDevice = if pkgs.stdenv.isi686 || pkgs.stdenv.isx86_64 then "ttyS0" - else if pkgs.stdenv.isArm || pkgs.stdenv.isAarch64 then "ttyAMA0" + else if pkgs.stdenv.isAarch32 || pkgs.stdenv.isAarch64 then "ttyAMA0" else throw "Unknown QEMU serial device for system '${pkgs.stdenv.system}'"; qemuBinary = qemuPkg: { diff --git a/nixos/modules/config/gnu.nix b/nixos/modules/config/gnu.nix index ef48ccb7b4fe..93d130970190 100644 --- a/nixos/modules/config/gnu.nix +++ b/nixos/modules/config/gnu.nix @@ -26,11 +26,11 @@ with lib; nano zile texinfo # for the stand-alone Info reader ] - ++ stdenv.lib.optional (!stdenv.isArm) grub2; + ++ stdenv.lib.optional (!stdenv.isAarch32) grub2; # GNU GRUB, where available. - boot.loader.grub.enable = !pkgs.stdenv.isArm; + boot.loader.grub.enable = !pkgs.stdenv.isAarch32; boot.loader.grub.version = 2; # GNU lsh. diff --git a/nixos/modules/config/pulseaudio.nix b/nixos/modules/config/pulseaudio.nix index a9c5fc75660d..90cea47b70ae 100644 --- a/nixos/modules/config/pulseaudio.nix +++ b/nixos/modules/config/pulseaudio.nix @@ -214,6 +214,8 @@ in { (mkIf cfg.enable { environment.systemPackages = [ overriddenPackage ]; + sound.enable = true; + environment.etc = [ { target = "asound.conf"; source = alsaConf; } diff --git a/nixos/modules/config/zram.nix b/nixos/modules/config/zram.nix index ae1b0a6c8e11..c1748812821e 100644 --- a/nixos/modules/config/zram.nix +++ b/nixos/modules/config/zram.nix @@ -25,16 +25,16 @@ in type = types.bool; description = '' Enable in-memory compressed swap space provided by the zram kernel - module. It is recommended to enable only for kernel 3.14 or higher. + module. + See https://www.kernel.org/doc/Documentation/blockdev/zram.txt ''; }; numDevices = mkOption { - default = 4; + default = 1; type = types.int; description = '' - Number of zram swap devices to create. It should be equal to the - number of CPU cores your system has. + Number of zram swap devices to create. ''; }; diff --git a/nixos/modules/installer/cd-dvd/channel.nix b/nixos/modules/installer/cd-dvd/channel.nix index 4a1983167957..01cfe8a02e10 100644 --- a/nixos/modules/installer/cd-dvd/channel.nix +++ b/nixos/modules/installer/cd-dvd/channel.nix @@ -21,7 +21,9 @@ let if [ ! -e $out/nixos/nixpkgs ]; then ln -s . $out/nixos/nixpkgs fi + echo -n ${config.system.nixos.revision} > $out/nixos/.git-revision echo -n ${config.system.nixos.versionSuffix} > $out/nixos/.version-suffix + echo ${config.system.nixos.versionSuffix} | sed -e s/pre// > $out/nixos/svn-revision ''; in diff --git a/nixos/modules/installer/cd-dvd/iso-image.nix b/nixos/modules/installer/cd-dvd/iso-image.nix index e7cbf415a223..83f8a2586bd3 100644 --- a/nixos/modules/installer/cd-dvd/iso-image.nix +++ b/nixos/modules/installer/cd-dvd/iso-image.nix @@ -59,7 +59,7 @@ let INITRD /boot/${config.system.boot.loader.initrdFile} # A variant to boot with verbose logging to the console - LABEL boot-nomodeset + LABEL boot-debug MENU LABEL NixOS ${config.system.nixos.label}${config.isoImage.appendToMenuLabel} (debug) LINUX /boot/${config.system.boot.loader.kernelFile} APPEND init=${config.system.build.toplevel}/init ${toString config.boot.kernelParams} loglevel=7 diff --git a/nixos/modules/installer/tools/nix-fallback-paths.nix b/nixos/modules/installer/tools/nix-fallback-paths.nix index 4774cf39c030..6bb556a0123c 100644 --- a/nixos/modules/installer/tools/nix-fallback-paths.nix +++ b/nixos/modules/installer/tools/nix-fallback-paths.nix @@ -1,6 +1,6 @@ { - x86_64-linux = "/nix/store/6p2gambjac7xdkd2a7w1dsxdk1q5cq4d-nix-2.0"; - i686-linux = "/nix/store/zznnaijjk3nwx0cmpczxsvngmqzhl7r4-nix-2.0"; - aarch64-linux = "/nix/store/ci96w9kxfkmlc7x2vwqiz4da0r6abxnq-nix-2.0"; - x86_64-darwin = "/nix/store/xmi4fylvx4qc79ji9v5q3zfy9vfdy4sv-nix-2.0"; + x86_64-linux = "/nix/store/2gk7rk2sx2dkmsjr59gignrfdmya8f6s-nix-2.0.1"; + i686-linux = "/nix/store/5160glkphiv13qggnivyidg8r0491pbl-nix-2.0.1"; + aarch64-linux = "/nix/store/jk29zz3ns9vdkkclcyzzkpzp8dhv1x3i-nix-2.0.1"; + x86_64-darwin = "/nix/store/4a9czmrpd4hf3r80zcmga2c2lm3hbbvv-nix-2.0.1"; } diff --git a/nixos/modules/installer/tools/nixos-enter.sh b/nixos/modules/installer/tools/nixos-enter.sh index 679391189612..518dbbbf21e3 100644 --- a/nixos/modules/installer/tools/nixos-enter.sh +++ b/nixos/modules/installer/tools/nixos-enter.sh @@ -51,8 +51,9 @@ if [[ ! -e $mountPoint/etc/NIXOS ]]; then exit 126 fi -mkdir -m 0755 -p "$mountPoint/dev" +mkdir -m 0755 -p "$mountPoint/dev" "$mountPoint/sys" mount --rbind /dev "$mountPoint/dev" +mount --rbind /sys "$mountPoint/sys" # Run the activation script. Set $LOCALE_ARCHIVE to supress some Perl locale warnings. LOCALE_ARCHIVE=$system/sw/lib/locale/locale-archive chroot "$mountPoint" "$system/activate" >&2 || true diff --git a/nixos/modules/installer/tools/nixos-generate-config.pl b/nixos/modules/installer/tools/nixos-generate-config.pl index 0e0744a52e42..14c611e18bc3 100644 --- a/nixos/modules/installer/tools/nixos-generate-config.pl +++ b/nixos/modules/installer/tools/nixos-generate-config.pl @@ -585,7 +585,6 @@ $bootLoaderConfig # Some programs need SUID wrappers, can be configured further or are # started in user sessions. - # programs.bash.enableCompletion = true; # programs.mtr.enable = true; # programs.gnupg.agent = { enable = true; enableSSHSupport = true; }; diff --git a/nixos/modules/misc/documentation.nix b/nixos/modules/misc/documentation.nix index cea8981370bb..2e426c017080 100644 --- a/nixos/modules/misc/documentation.nix +++ b/nixos/modules/misc/documentation.nix @@ -16,7 +16,10 @@ let cfg = config.documentation; in description = '' Whether to install documentation of packages from <option>environment.systemPackages</option> into the generated system path. + + See "Multiple-output packages" chapter in the nixpkgs manual for more info. ''; + # which is at ../../../doc/multiple-output.xml }; man.enable = mkOption { @@ -28,6 +31,15 @@ let cfg = config.documentation; in ''; }; + info.enable = mkOption { + type = types.bool; + default = true; + description = '' + Whether to install info pages and the <command>info</command> command. + This also includes "info" outputs. + ''; + }; + doc.enable = mkOption { type = types.bool; default = true; @@ -38,12 +50,19 @@ let cfg = config.documentation; in ''; }; - info.enable = mkOption { + dev.enable = mkOption { type = types.bool; - default = true; + default = false; description = '' - Whether to install info pages and the <command>info</command> command. - This also includes "info" outputs. + Whether to install documentation targeted at developers. + <itemizedlist> + <listitem><para>This includes man pages targeted at developers if <option>man.enable</option> is + set (this also includes "devman" outputs).</para></listitem> + <listitem><para>This includes info pages targeted at developers if <option>info.enable</option> + is set (this also includes "devinfo" outputs).</para></listitem> + <listitem><para>This includes other pages targeted at developers if <option>doc.enable</option> + is set (this also includes "devdoc" outputs).</para></listitem> + </itemizedlist> ''; }; @@ -56,20 +75,20 @@ let cfg = config.documentation; in (mkIf cfg.man.enable { environment.systemPackages = [ pkgs.man-db ]; environment.pathsToLink = [ "/share/man" ]; - environment.extraOutputsToInstall = [ "man" ]; + environment.extraOutputsToInstall = [ "man" ] ++ optional cfg.dev.enable [ "devman" ]; + }) + + (mkIf cfg.info.enable { + environment.systemPackages = [ pkgs.texinfoInteractive ]; + environment.pathsToLink = [ "/share/info" ]; + environment.extraOutputsToInstall = [ "info" ] ++ optional cfg.dev.enable [ "devinfo" ]; }) (mkIf cfg.doc.enable { # TODO(@oxij): put it here and remove from profiles? # environment.systemPackages = [ pkgs.w3m ]; # w3m-nox? environment.pathsToLink = [ "/share/doc" ]; - environment.extraOutputsToInstall = [ "doc" ]; - }) - - (mkIf cfg.info.enable { - environment.systemPackages = [ pkgs.texinfoInteractive ]; - environment.pathsToLink = [ "/share/info" ]; - environment.extraOutputsToInstall = [ "info" ]; + environment.extraOutputsToInstall = [ "doc" ] ++ optional cfg.dev.enable [ "devdoc" ]; }) ]); diff --git a/nixos/modules/misc/ids.nix b/nixos/modules/misc/ids.nix index 3594f57595c7..ab3cbcab0646 100644 --- a/nixos/modules/misc/ids.nix +++ b/nixos/modules/misc/ids.nix @@ -56,7 +56,7 @@ #dialout = 27; # unused polkituser = 28; #utmp = 29; # unused - ddclient = 30; + # ddclient = 30; # converted to DynamicUser = true davfs2 = 31; #disnix = 33; # unused osgi = 34; @@ -344,7 +344,7 @@ dialout = 27; #polkituser = 28; # currently unused, polkitd doesn't need a group utmp = 29; - ddclient = 30; + # ddclient = 30; # converted to DynamicUser = true davfs2 = 31; disnix = 33; osgi = 34; diff --git a/nixos/modules/misc/locate.nix b/nixos/modules/misc/locate.nix index 51953d1110c4..ce5765cf1978 100644 --- a/nixos/modules/misc/locate.nix +++ b/nixos/modules/misc/locate.nix @@ -97,7 +97,7 @@ in { Whether not to index bind mounts ''; }; - + }; config = mkIf cfg.enable { @@ -133,13 +133,26 @@ in { systemd.services.update-locatedb = { description = "Update Locate Database"; path = mkIf (!isMLocate) [ pkgs.su ]; + + # mlocate's updatedb takes flags via a configuration file or + # on the command line, but not by environment variable. script = + if isMLocate + then let toFlags = x: optional (cfg.${x} != []) + "--${lib.toLower x} '${concatStringsSep " " cfg.${x}}'"; + args = concatLists (map toFlags ["pruneFS" "pruneNames" "prunePaths"]); + in '' + exec ${cfg.locate}/bin/updatedb \ + --output ${toString cfg.output} ${concatStringsSep " " args} \ + --prune-bind-mounts ${if cfg.pruneBindMounts then "yes" else "no"} \ + ${concatStringsSep " " cfg.extraFlags} '' + else '' exec ${cfg.locate}/bin/updatedb \ ${optionalString (cfg.localuser != null && ! isMLocate) ''--localuser=${cfg.localuser}''} \ --output=${toString cfg.output} ${concatStringsSep " " cfg.extraFlags} ''; - environment = { + environment = optionalAttrs (!isMLocate) { PRUNEFS = concatStringsSep " " cfg.pruneFS; PRUNEPATHS = concatStringsSep " " cfg.prunePaths; PRUNENAMES = concatStringsSep " " cfg.pruneNames; diff --git a/nixos/modules/misc/nixpkgs.nix b/nixos/modules/misc/nixpkgs.nix index 9217250eec29..b8a55a24394e 100644 --- a/nixos/modules/misc/nixpkgs.nix +++ b/nixos/modules/misc/nixpkgs.nix @@ -58,10 +58,13 @@ in pkgs = mkOption { defaultText = literalExample ''import "''${nixos}/.." { - inherit (config.nixpkgs) config overlays system; + inherit (config.nixpkgs) config overlays localSystem crossSystem; } ''; - default = import ../../.. { inherit (cfg) config overlays system crossSystem; }; + default = import ../../.. { + localSystem = { inherit (cfg) system; } // cfg.localSystem; + inherit (cfg) config overlays crossSystem; + }; type = pkgsType; example = literalExample ''import <nixpkgs> {}''; description = '' @@ -73,8 +76,9 @@ in relative to the location of this NixOS module, because NixOS and Nixpkgs are distributed together for consistency, so the <code>nixos</code> in the default value is in fact a - relative path. The <code>config</code>, <code>overlays</code> - and <code>system</code> come from this option's siblings. + relative path. The <code>config</code>, <code>overlays</code>, + <code>localSystem</code>, and <code>crossSystem</code> come + from this option's siblings. This option can be used by applications like NixOps to increase the performance of evaluation, or to create packages that depend @@ -130,13 +134,40 @@ in ''; }; + localSystem = mkOption { + type = types.attrs; # TODO utilize lib.systems.parsedPlatform + default = { system = builtins.currentSystem; }; + example = { system = "aarch64-linux"; config = "aarch64-unknown-linux-gnu"; }; + defaultText = literalExample + ''(import "''${nixos}/../lib").lib.systems.examples.aarch64-multiplatform''; + description = '' + Specifies the platform on which NixOS should be built. When + <code>nixpkgs.crossSystem</code> is unset, it also specifies + the platform <emphasis>for</emphasis> which NixOS should be + built. If this option is unset, it defaults to the platform + type of the machine where evaluation happens. Specifying this + option is useful when doing distributed multi-platform + deployment, or when building virtual machines. See its + description in the Nixpkgs manual for more details. + + Ignored when <code>nixpkgs.pkgs</code> is set. + ''; + }; + crossSystem = mkOption { - type = types.nullOr types.attrs; + type = types.nullOr types.attrs; # TODO utilize lib.systems.parsedPlatform default = null; + example = { system = "aarch64-linux"; config = "aarch64-unknown-linux-gnu"; }; + defaultText = literalExample + ''(import "''${nixos}/../lib").lib.systems.examples.aarch64-multiplatform''; description = '' - The description of the system we're cross-compiling to, or null - if this isn't a cross-compile. See the description of the - crossSystem argument in the nixpkgs manual. + Specifies the platform for which NixOS should be + built. Specify this only if it is different from + <code>nixpkgs.localSystem</code>, the platform + <emphasis>on</emphasis> which NixOS should be built. In other + words, specify this to cross-compile NixOS. Otherwise it + should be set as null, the default. See its description in the + Nixpkgs manual for more details. Ignored when <code>nixpkgs.pkgs</code> is set. ''; @@ -146,10 +177,20 @@ in type = types.str; example = "i686-linux"; description = '' - Specifies the Nix platform type for which NixOS should be built. - If unset, it defaults to the platform type of your host system. - Specifying this option is useful when doing distributed - multi-platform deployment, or when building virtual machines. + Specifies the Nix platform type on which NixOS should be built. + It is better to specify <code>nixpkgs.localSystem</code> instead. + <programlisting> + { + nixpkgs.system = ..; + } + </programlisting> + is the same as + <programlisting> + { + nixpkgs.localSystem.system = ..; + } + </programlisting> + See <code>nixpkgs.localSystem</code> for more information. Ignored when <code>nixpkgs.pkgs</code> is set. ''; diff --git a/nixos/modules/misc/version.nix b/nixos/modules/misc/version.nix index 7519d9176982..b8f0a223c910 100644 --- a/nixos/modules/misc/version.nix +++ b/nixos/modules/misc/version.nix @@ -16,21 +16,6 @@ in options.system = { - # XXX: Reintroduce old options to make nixops before 1.6 able to evaluate configurations - # XXX: Remove after nixops has been bumped to a compatible version - nixosVersion = mkOption { - readOnly = true; - internal = true; - type = types.str; - default = config.system.nixos.version; - }; - nixosVersionSuffix = mkOption { - readOnly = true; - internal = true; - type = types.str; - default = config.system.nixos.versionSuffix; - }; - nixos.version = mkOption { internal = true; type = types.str; diff --git a/nixos/modules/module-list.nix b/nixos/modules/module-list.nix index 3a9a2bf86616..1261fe950928 100644 --- a/nixos/modules/module-list.nix +++ b/nixos/modules/module-list.nix @@ -166,6 +166,7 @@ ./services/backup/crashplan-small-business.nix ./services/backup/mysql-backup.nix ./services/backup/postgresql-backup.nix + ./services/backup/restic.nix ./services/backup/rsnapshot.nix ./services/backup/tarsnap.nix ./services/backup/znapzend.nix @@ -194,6 +195,7 @@ ./services/databases/clickhouse.nix ./services/databases/couchdb.nix ./services/databases/firebird.nix + ./services/databases/foundationdb.nix ./services/databases/hbase.nix ./services/databases/influxdb.nix ./services/databases/memcached.nix @@ -480,6 +482,7 @@ ./services/networking/gnunet.nix ./services/networking/gogoclient.nix ./services/networking/gvpe.nix + ./services/networking/hans.nix ./services/networking/haproxy.nix ./services/networking/heyefi.nix ./services/networking/hostapd.nix @@ -533,7 +536,7 @@ ./services/networking/prayer.nix ./services/networking/privoxy.nix ./services/networking/prosody.nix - # ./services/networking/quagga.nix + ./services/networking/quagga.nix ./services/networking/quassel.nix ./services/networking/racoon.nix ./services/networking/radicale.nix @@ -547,6 +550,7 @@ ./services/networking/searx.nix ./services/networking/seeks.nix ./services/networking/skydns.nix + ./services/networking/shadowsocks.nix ./services/networking/shairport-sync.nix ./services/networking/shout.nix ./services/networking/sniproxy.nix @@ -558,6 +562,7 @@ ./services/networking/ssh/lshd.nix ./services/networking/ssh/sshd.nix ./services/networking/strongswan.nix + ./services/networking/strongswan-swanctl/module.nix ./services/networking/stunnel.nix ./services/networking/supplicant.nix ./services/networking/supybot.nix diff --git a/nixos/modules/programs/bash/bash.nix b/nixos/modules/programs/bash/bash.nix index c0967316c0c7..69a1a482d074 100644 --- a/nixos/modules/programs/bash/bash.nix +++ b/nixos/modules/programs/bash/bash.nix @@ -110,7 +110,7 @@ in }; enableCompletion = mkOption { - default = false; + default = true; description = '' Enable Bash completion for all interactive bash shells. ''; diff --git a/nixos/modules/rename.nix b/nixos/modules/rename.nix index 0c3ac054292d..a1ead80cc215 100644 --- a/nixos/modules/rename.nix +++ b/nixos/modules/rename.nix @@ -23,6 +23,8 @@ with lib; (config: let enabled = getAttrFromPath [ "services" "printing" "gutenprint" ] config; in if enabled then [ pkgs.gutenprint ] else [ ])) + (mkRenamedOptionModule [ "services" "ddclient" "domain" ] [ "services" "ddclient" "domains" ]) + (mkRemovedOptionModule [ "services" "ddclient" "homeDir" ] "") (mkRenamedOptionModule [ "services" "elasticsearch" "host" ] [ "services" "elasticsearch" "listenAddress" ]) (mkRenamedOptionModule [ "services" "graphite" "api" "host" ] [ "services" "graphite" "api" "listenAddress" ]) (mkRenamedOptionModule [ "services" "graphite" "web" "host" ] [ "services" "graphite" "web" "listenAddress" ]) @@ -187,22 +189,20 @@ with lib; (mkRenamedOptionModule [ "services" "xserver" "desktopManager" "kde5" ] [ "services" "xserver" "desktopManager" "plasma5" ]) # Fontconfig - (mkRenamedOptionModule [ "config" "fonts" "fontconfig" "ultimate" "allowBitmaps" ] [ "config" "fonts" "fontconfig" "allowBitmaps" ]) - (mkRenamedOptionModule [ "config" "fonts" "fontconfig" "ultimate" "allowType1" ] [ "config" "fonts" "fontconfig" "allowType1" ]) - (mkRenamedOptionModule [ "config" "fonts" "fontconfig" "ultimate" "useEmbeddedBitmaps" ] [ "config" "fonts" "fontconfig" "useEmbeddedBitmaps" ]) - (mkRenamedOptionModule [ "config" "fonts" "fontconfig" "ultimate" "forceAutohint" ] [ "config" "fonts" "fontconfig" "forceAutohint" ]) - (mkRenamedOptionModule [ "config" "fonts" "fontconfig" "ultimate" "renderMonoTTFAsBitmap" ] [ "config" "fonts" "fontconfig" "renderMonoTTFAsBitmap" ]) + (mkRenamedOptionModule [ "fonts" "fontconfig" "ultimate" "allowBitmaps" ] [ "fonts" "fontconfig" "allowBitmaps" ]) + (mkRenamedOptionModule [ "fonts" "fontconfig" "ultimate" "allowType1" ] [ "fonts" "fontconfig" "allowType1" ]) + (mkRenamedOptionModule [ "fonts" "fontconfig" "ultimate" "useEmbeddedBitmaps" ] [ "fonts" "fontconfig" "useEmbeddedBitmaps" ]) + (mkRenamedOptionModule [ "fonts" "fontconfig" "ultimate" "forceAutohint" ] [ "fonts" "fontconfig" "forceAutohint" ]) + (mkRenamedOptionModule [ "fonts" "fontconfig" "ultimate" "renderMonoTTFAsBitmap" ] [ "fonts" "fontconfig" "renderMonoTTFAsBitmap" ]) # Profile splitting (mkRenamedOptionModule [ "virtualization" "growPartition" ] [ "boot" "growPartition" ]) # misc/version.nix - #(mkRenamedOptionModule [ "config" "system" "nixosVersion" ] [ "config" "system" "nixos" "version" ]) - (mkRenamedOptionModule [ "config" "system" "nixosRelease" ] [ "config" "system" "nixos" "release" ]) - #(mkRenamedOptionModule [ "config" "system" "nixosVersionSuffix" ] [ "config" "system" "nixos" "versionSuffix" ]) - (mkRenamedOptionModule [ "config" "system" "nixosRevision" ] [ "config" "system" "nixos" "revision" ]) - (mkRenamedOptionModule [ "config" "system" "nixosCodeName" ] [ "config" "system" "nixos" "codeName" ]) - (mkRenamedOptionModule [ "config" "system" "nixosLabel" ] [ "config" "system" "nixos" "label" ]) + (mkRenamedOptionModule [ "system" "nixosVersion" ] [ "system" "nixos" "version" ]) + (mkRenamedOptionModule [ "system" "nixosVersionSuffix" ] [ "system" "nixos" "versionSuffix" ]) + (mkRenamedOptionModule [ "system" "nixosRevision" ] [ "system" "nixos" "revision" ]) + (mkRenamedOptionModule [ "system" "nixosLabel" ] [ "system" "nixos" "label" ]) # Users (mkAliasOptionModule [ "users" "extraUsers" ] [ "users" "users" ]) diff --git a/nixos/modules/security/acme.nix b/nixos/modules/security/acme.nix index e9676d9dfb15..e430c2ddb903 100644 --- a/nixos/modules/security/acme.nix +++ b/nixos/modules/security/acme.nix @@ -58,9 +58,11 @@ let default = ""; example = "systemctl reload nginx.service"; description = '' - Commands to run after certificates are re-issued. Typically + Commands to run after new certificates go live. Typically the web server and other servers using certificates need to be reloaded. + + Executed in the same directory with the new certificate. ''; }; @@ -78,6 +80,27 @@ let ''; }; + activationDelay = mkOption { + type = types.nullOr types.str; + default = null; + description = '' + Systemd time span expression to delay copying new certificates to main + state directory. See <citerefentry><refentrytitle>systemd.time</refentrytitle> + <manvolnum>7</manvolnum></citerefentry>. + ''; + }; + + preDelay = mkOption { + type = types.lines; + default = ""; + description = '' + Commands to run after certificates are re-issued but before they are + activated. Typically the new certificate is published to DNS. + + Executed in the same directory with the new certificate. + ''; + }; + extraDomains = mkOption { type = types.attrsOf (types.nullOr types.str); default = {}; @@ -186,14 +209,15 @@ in servicesLists = mapAttrsToList certToServices cfg.certs; certToServices = cert: data: let - cpath = "${cfg.directory}/${cert}"; + domain = if data.domain != null then data.domain else cert; + cpath = lpath + optionalString (data.activationDelay != null) ".staging"; + lpath = "${cfg.directory}/${cert}"; rights = if data.allowKeysForGroup then "750" else "700"; cmdline = [ "-v" "-d" data.domain "--default_root" data.webroot "--valid_min" cfg.validMin ] ++ optionals (data.email != null) [ "--email" data.email ] ++ concatMap (p: [ "-f" p ]) data.plugins ++ concatLists (mapAttrsToList (name: root: [ "-d" (if root == null then name else "${name}:${root}")]) data.extraDomains) - ++ (if cfg.production then [] - else ["--server" "https://acme-staging.api.letsencrypt.org/directory"]); + ++ optionals (!cfg.production) ["--server" "https://acme-staging.api.letsencrypt.org/directory"]; acmeService = { description = "Renew ACME Certificate for ${cert}"; after = [ "network.target" "network-online.target" ]; @@ -206,7 +230,7 @@ in Group = data.group; PrivateTmp = true; }; - path = [ pkgs.simp_le ]; + path = with pkgs; [ simp_le systemd ]; preStart = '' mkdir -p '${cfg.directory}' chown 'root:root' '${cfg.directory}' @@ -229,17 +253,39 @@ in exit "$EXITCODE" ''; postStop = '' + cd '${cpath}' + if [ -e /tmp/lastExitCode ] && [ "$(cat /tmp/lastExitCode)" = "0" ]; then - echo "Executing postRun hook..." - ${data.postRun} + ${if data.activationDelay != null then '' + + ${data.preDelay} + + if [ -d '${lpath}' ]; then + systemd-run --no-block --on-active='${data.activationDelay}' --unit acme-setlive-${cert}.service + else + systemctl --wait start acme-setlive-${cert}.service + fi + '' else data.postRun} fi ''; before = [ "acme-certificates.target" ]; wantedBy = [ "acme-certificates.target" ]; }; + delayService = { + description = "Set certificate for ${cert} live"; + path = with pkgs; [ rsync ]; + serviceConfig = { + Type = "oneshot"; + }; + script = '' + rsync -a --delete-after '${cpath}/' '${lpath}' + ''; + postStop = data.postRun; + }; selfsignedService = { description = "Create preliminary self-signed certificate for ${cert}"; + path = [ pkgs.openssl ]; preStart = '' if [ ! -d '${cpath}' ] then @@ -250,37 +296,41 @@ in ''; script = '' - # Create self-signed key - workdir="/run/acme-selfsigned-${cert}" - ${pkgs.openssl.bin}/bin/openssl genrsa -des3 -passout pass:x -out $workdir/server.pass.key 2048 - ${pkgs.openssl.bin}/bin/openssl rsa -passin pass:x -in $workdir/server.pass.key -out $workdir/server.key - ${pkgs.openssl.bin}/bin/openssl req -new -key $workdir/server.key -out $workdir/server.csr \ + workdir="$(mktemp -d)" + + # Create CA + openssl genrsa -des3 -passout pass:x -out $workdir/ca.pass.key 2048 + openssl rsa -passin pass:x -in $workdir/ca.pass.key -out $workdir/ca.key + openssl req -new -key $workdir/ca.key -out $workdir/ca.csr \ + -subj "/C=UK/ST=Warwickshire/L=Leamington/O=OrgName/OU=Security Department/CN=example.com" + openssl x509 -req -days 1 -in $workdir/ca.csr -signkey $workdir/ca.key -out $workdir/ca.crt + + # Create key + openssl genrsa -des3 -passout pass:x -out $workdir/server.pass.key 2048 + openssl rsa -passin pass:x -in $workdir/server.pass.key -out $workdir/server.key + openssl req -new -key $workdir/server.key -out $workdir/server.csr \ -subj "/C=UK/ST=Warwickshire/L=Leamington/O=OrgName/OU=IT Department/CN=example.com" - ${pkgs.openssl.bin}/bin/openssl x509 -req -days 1 -in $workdir/server.csr -signkey $workdir/server.key -out $workdir/server.crt + openssl x509 -req -days 1 -in $workdir/server.csr -CA $workdir/ca.crt \ + -CAkey $workdir/ca.key -CAserial $workdir/ca.srl -CAcreateserial \ + -out $workdir/server.crt - # Move key to destination - mv $workdir/server.key ${cpath}/key.pem - mv $workdir/server.crt ${cpath}/fullchain.pem + # Copy key to destination + cp $workdir/server.key ${cpath}/key.pem - # Create full.pem for e.g. lighttpd (same format as "simp_le ... -f full.pem" creates) - cat "${cpath}/key.pem" "${cpath}/fullchain.pem" > "${cpath}/full.pem" + # Create fullchain.pem (same format as "simp_le ... -f fullchain.pem" creates) + cat $workdir/{server.crt,ca.crt} > "${cpath}/fullchain.pem" - # Clean up working directory - rm $workdir/server.csr - rm $workdir/server.pass.key + # Create full.pem for e.g. lighttpd + cat $workdir/{server.key,server.crt,ca.crt} > "${cpath}/full.pem" # Give key acme permissions - chmod ${rights} '${cpath}/key.pem' - chown '${data.user}:${data.group}' '${cpath}/key.pem' - chmod ${rights} '${cpath}/fullchain.pem' - chown '${data.user}:${data.group}' '${cpath}/fullchain.pem' - chmod ${rights} '${cpath}/full.pem' - chown '${data.user}:${data.group}' '${cpath}/full.pem' + chown '${data.user}:${data.group}' "${cpath}/"{key,fullchain,full}.pem + chmod ${rights} "${cpath}/"{key,fullchain,full}.pem ''; serviceConfig = { Type = "oneshot"; - RuntimeDirectory = "acme-selfsigned-${cert}"; PermissionsStartOnly = true; + PrivateTmp = true; User = data.user; Group = data.group; }; @@ -297,11 +347,8 @@ in }; in ( [ { name = "acme-${cert}"; value = acmeService; } ] - ++ - (if cfg.preliminarySelfsigned - then [ { name = "acme-selfsigned-${cert}"; value = selfsignedService; } ] - else [] - ) + ++ optional cfg.preliminarySelfsigned { name = "acme-selfsigned-${cert}"; value = selfsignedService; } + ++ optional (data.activationDelay != null) { name = "acme-setlive-${cert}"; value = delayService; } ); servicesAttr = listToAttrs services; injectServiceDep = { diff --git a/nixos/modules/security/pam.nix b/nixos/modules/security/pam.nix index f2bdfcf885ee..48998285d89d 100644 --- a/nixos/modules/security/pam.nix +++ b/nixos/modules/security/pam.nix @@ -234,6 +234,11 @@ let password, KDE will prompt separately after login. ''; }; + sssdStrictAccess = mkOption { + default = false; + type = types.bool; + description = "enforce sssd access control"; + }; enableGnomeKeyring = mkOption { default = false; @@ -264,11 +269,13 @@ let text = mkDefault ('' # Account management. - account sufficient pam_unix.so + account ${if cfg.sssdStrictAccess then "required" else "sufficient"} pam_unix.so ${optionalString use_ldap "account sufficient ${pam_ldap}/lib/security/pam_ldap.so"} - ${optionalString config.services.sssd.enable + ${optionalString (config.services.sssd.enable && cfg.sssdStrictAccess==false) "account sufficient ${pkgs.sssd}/lib/security/pam_sss.so"} + ${optionalString (config.services.sssd.enable && cfg.sssdStrictAccess) + "account [default=bad success=ok user_unknown=ignore] ${pkgs.sssd}/lib/security/pam_sss.so"} ${optionalString config.krb5.enable "account sufficient ${pam_krb5}/lib/security/pam_krb5.so"} diff --git a/nixos/modules/services/backup/restic.nix b/nixos/modules/services/backup/restic.nix new file mode 100644 index 000000000000..21d82469c605 --- /dev/null +++ b/nixos/modules/services/backup/restic.nix @@ -0,0 +1,150 @@ +{ config, lib, pkgs, ... }: + +with lib; +{ + options.services.restic.backups = mkOption { + description = '' + Periodic backups to create with Restic. + ''; + type = types.attrsOf (types.submodule ({ name, config, ... }: { + options = { + passwordFile = mkOption { + type = types.str; + description = '' + Read the repository password from a file. + ''; + example = "/etc/nixos/restic-password"; + + }; + + repository = mkOption { + type = types.str; + description = '' + repository to backup to. + ''; + example = "sftp:backup@192.168.1.100:/backups/${name}"; + }; + + paths = mkOption { + type = types.listOf types.str; + default = []; + description = '' + Which paths to backup. + ''; + example = [ + "/var/lib/postgresql" + "/home/user/backup" + ]; + }; + + timerConfig = mkOption { + type = types.attrsOf types.str; + default = { + OnCalendar = "daily"; + }; + description = '' + When to run the backup. See man systemd.timer for details. + ''; + example = { + OnCalendar = "00:05"; + RandomizedDelaySec = "5h"; + }; + }; + + user = mkOption { + type = types.str; + default = "root"; + description = '' + As which user the backup should run. + ''; + example = "postgresql"; + }; + + extraBackupArgs = mkOption { + type = types.listOf types.str; + default = []; + description = '' + Extra arguments passed to restic backup. + ''; + example = [ + "--exclude-file=/etc/nixos/restic-ignore" + ]; + }; + + extraOptions = mkOption { + type = types.listOf types.str; + default = []; + description = '' + Extra extended options to be passed to the restic --option flag. + ''; + example = [ + "sftp.command='ssh backup@192.168.1.100 -i /home/user/.ssh/id_rsa -s sftp'" + ]; + }; + + initialize = mkOption { + type = types.bool; + default = false; + description = '' + Create the repository if it doesn't exist. + ''; + }; + }; + })); + default = {}; + example = { + localbackup = { + paths = [ "/home" ]; + repository = "/mnt/backup-hdd"; + passwordFile = "/etc/nixos/secrets/restic-password"; + initialize = true; + }; + remotebackup = { + paths = [ "/home" ]; + repository = "sftp:backup@host:/backups/home"; + passwordFile = "/etc/nixos/secrets/restic-password"; + extraOptions = [ + "sftp.command='ssh backup@host -i /etc/nixos/secrets/backup-private-key -s sftp'" + ]; + timerConfig = { + OnCalendar = "00:05"; + RandomizedDelaySec = "5h"; + }; + }; + }; + }; + + config = { + systemd.services = + mapAttrs' (name: backup: + let + extraOptions = concatMapStrings (arg: " -o ${arg}") backup.extraOptions; + connectTo = elemAt (splitString ":" backup.repository) 1; + resticCmd = "${pkgs.restic}/bin/restic${extraOptions}"; + in nameValuePair "restic-backups-${name}" ({ + environment = { + RESTIC_PASSWORD_FILE = backup.passwordFile; + RESTIC_REPOSITORY = backup.repository; + }; + path = with pkgs; [ + openssh + ]; + restartIfChanged = false; + serviceConfig = { + Type = "oneshot"; + ExecStart = "${resticCmd} backup ${concatStringsSep " " backup.extraBackupArgs} ${concatStringsSep " " backup.paths}"; + User = backup.user; + }; + } // optionalAttrs backup.initialize { + preStart = '' + ${resticCmd} snapshots || ${resticCmd} init + ''; + }) + ) config.services.restic.backups; + systemd.timers = + mapAttrs' (name: backup: nameValuePair "restic-backups-${name}" { + wantedBy = [ "timers.target" ]; + timerConfig = backup.timerConfig; + }) config.services.restic.backups; + }; +} diff --git a/nixos/modules/services/computing/boinc/client.nix b/nixos/modules/services/computing/boinc/client.nix index e43b6bbb2536..8abe3c5b8c9b 100644 --- a/nixos/modules/services/computing/boinc/client.nix +++ b/nixos/modules/services/computing/boinc/client.nix @@ -6,6 +6,13 @@ let cfg = config.services.boinc; allowRemoteGuiRpcFlag = optionalString cfg.allowRemoteGuiRpc "--allow_remote_gui_rpc"; + fhsEnv = pkgs.buildFHSUserEnv { + name = "boinc-fhs-env"; + targetPkgs = pkgs': [ cfg.package ] ++ cfg.extraEnvPackages; + runScript = "/bin/boinc_client"; + }; + fhsEnvExecutable = "${fhsEnv}/bin/${fhsEnv.name}"; + in { options.services.boinc = { @@ -49,6 +56,43 @@ in See also: <link xlink:href="http://boinc.berkeley.edu/wiki/Controlling_BOINC_remotely#Remote_access"/> ''; }; + + extraEnvPackages = mkOption { + type = types.listOf types.package; + default = []; + example = "[ pkgs.virtualbox ]"; + description = '' + Additional packages to make available in the environment in which + BOINC will run. Common choices are: + <variablelist> + <varlistentry> + <term><varname>pkgs.virtualbox</varname></term> + <listitem><para> + The VirtualBox virtual machine framework. Required by some BOINC + projects, such as ATLAS@home. + </para></listitem> + </varlistentry> + <varlistentry> + <term><varname>pkgs.ocl-icd</varname></term> + <listitem><para> + OpenCL infrastructure library. Required by BOINC projects that + use OpenCL, in addition to a device-specific OpenCL driver. + </para></listitem> + </varlistentry> + <varlistentry> + <term><varname>pkgs.linuxPackages.nvidia_x11</varname></term> + <listitem><para> + Provides CUDA libraries. Required by BOINC projects that use + CUDA. Note that this requires an NVIDIA graphics device to be + present on the system. + </para><para> + Also provides OpenCL drivers for NVIDIA GPUs; + <varname>pkgs.ocl-icd</varname> is also needed in this case. + </para></listitem> + </varlistentry> + </variablelist> + ''; + }; }; config = mkIf cfg.enable { @@ -70,7 +114,7 @@ in chown boinc ${cfg.dataDir} ''; script = '' - ${cfg.package}/bin/boinc_client --dir ${cfg.dataDir} --redirectio ${allowRemoteGuiRpcFlag} + ${fhsEnvExecutable} --dir ${cfg.dataDir} --redirectio ${allowRemoteGuiRpcFlag} ''; serviceConfig = { PermissionsStartOnly = true; # preStart must be run as root diff --git a/nixos/modules/services/databases/foundationdb.nix b/nixos/modules/services/databases/foundationdb.nix new file mode 100644 index 000000000000..22acddc8ca91 --- /dev/null +++ b/nixos/modules/services/databases/foundationdb.nix @@ -0,0 +1,360 @@ +{ config, lib, pkgs, ... }: + +with lib; + +let + cfg = config.services.foundationdb; + + # used for initial cluster configuration + initialIpAddr = if (cfg.publicAddress != "auto") then cfg.publicAddress else "127.0.0.1"; + + fdbServers = n: + concatStringsSep "\n" (map (x: "[fdbserver.${toString (x+cfg.listenPortStart)}]") (range 0 (n - 1))); + + backupAgents = n: + concatStringsSep "\n" (map (x: "[backup_agent.${toString x}]") (range 1 n)); + + configFile = pkgs.writeText "foundationdb.conf" '' + [general] + cluster_file = /etc/foundationdb/fdb.cluster + + [fdbmonitor] + restart_delay = ${toString cfg.restartDelay} + user = ${cfg.user} + group = ${cfg.group} + + [fdbserver] + command = ${pkgs.foundationdb}/bin/fdbserver + public_address = ${cfg.publicAddress}:$ID + listen_address = ${cfg.listenAddress} + datadir = ${cfg.dataDir}/$ID + logdir = ${cfg.logDir} + logsize = ${cfg.logSize} + maxlogssize = ${cfg.maxLogSize} + ${optionalString (cfg.class != null) "class = ${cfg.class}"} + memory = ${cfg.memory} + storage_memory = ${cfg.storageMemory} + + ${optionalString (cfg.locality.machineId != null) "locality_machineid=${cfg.locality.machineId}"} + ${optionalString (cfg.locality.zoneId != null) "locality_zoneid=${cfg.locality.zoneId}"} + ${optionalString (cfg.locality.datacenterId != null) "locality_dcid=${cfg.locality.datacenterId}"} + ${optionalString (cfg.locality.dataHall != null) "locality_data_hall=${cfg.locality.dataHall}"} + + ${fdbServers cfg.serverProcesses} + + [backup_agent] + command = ${pkgs.foundationdb}/libexec/backup_agent + ${backupAgents cfg.backupProcesses} + ''; +in +{ + options.services.foundationdb = { + + enable = mkEnableOption "FoundationDB Server"; + + publicAddress = mkOption { + type = types.str; + default = "auto"; + description = "Publicly visible IP address of the process. Port is determined by process ID"; + }; + + listenAddress = mkOption { + type = types.str; + default = "public"; + description = "Publicly visible IP address of the process. Port is determined by process ID"; + }; + + listenPortStart = mkOption { + type = types.int; + default = 4500; + description = '' + Starting port number for database listening sockets. Every FDB process binds to a + subsequent port, to this number reflects the start of the overall range. e.g. having + 8 server processes will use all ports between 4500 and 4507. + ''; + }; + + openFirewall = mkOption { + type = types.bool; + default = false; + description = '' + Open the firewall ports corresponding to FoundationDB processes and coordinators + using <option>config.networking.firewall.*</option>. + ''; + }; + + dataDir = mkOption { + type = types.path; + default = "/var/lib/foundationdb"; + description = "Data directory. All cluster data will be put under here."; + }; + + logDir = mkOption { + type = types.path; + default = "/var/log/foundationdb"; + description = "Log directory."; + }; + + user = mkOption { + type = types.str; + default = "foundationdb"; + description = "User account under which FoundationDB runs."; + }; + + group = mkOption { + type = types.str; + default = "foundationdb"; + description = "Group account under which FoundationDB runs."; + }; + + class = mkOption { + type = types.nullOr (types.enum [ "storage" "transaction" "stateless" ]); + default = null; + description = "Process class"; + }; + + restartDelay = mkOption { + type = types.int; + default = 10; + description = "Number of seconds to wait before restarting servers."; + }; + + logSize = mkOption { + type = types.string; + default = "10MiB"; + description = '' + Roll over to a new log file after the current log file + reaches the specified size. + ''; + }; + + maxLogSize = mkOption { + type = types.string; + default = "100MiB"; + description = '' + Delete the oldest log file when the total size of all log + files exceeds the specified size. If set to 0, old log files + will not be deleted. + ''; + }; + + serverProcesses = mkOption { + type = types.int; + default = 1; + description = "Number of fdbserver processes to run."; + }; + + backupProcesses = mkOption { + type = types.int; + default = 1; + description = "Number of backup_agent processes to run for snapshots."; + }; + + memory = mkOption { + type = types.string; + default = "8GiB"; + description = '' + Maximum memory used by the process. The default value is + <literal>8GiB</literal>. When specified without a unit, + <literal>MiB</literal> is assumed. This parameter does not + change the memory allocation of the program. Rather, it sets + a hard limit beyond which the process will kill itself and + be restarted. The default value of <literal>8GiB</literal> + is double the intended memory usage in the default + configuration (providing an emergency buffer to deal with + memory leaks or similar problems). It is not recommended to + decrease the value of this parameter below its default + value. It may be increased if you wish to allocate a very + large amount of storage engine memory or cache. In + particular, when the <literal>storageMemory</literal> + parameter is increased, the <literal>memory</literal> + parameter should be increased by an equal amount. + ''; + }; + + storageMemory = mkOption { + type = types.string; + default = "1GiB"; + description = '' + Maximum memory used for data storage. The default value is + <literal>1GiB</literal>. When specified without a unit, + <literal>MB</literal> is assumed. Clusters using the memory + storage engine will be restricted to using this amount of + memory per process for purposes of data storage. Memory + overhead associated with storing the data is counted against + this total. If you increase the + <literal>storageMemory</literal>, you should also increase + the <literal>memory</literal> parameter by the same amount. + ''; + }; + + locality = mkOption { + default = { + machineId = null; + zoneId = null; + datacenterId = null; + dataHall = null; + }; + + description = '' + FoundationDB locality settings. + ''; + + type = types.submodule ({ + options = { + machineId = mkOption { + default = null; + type = types.nullOr types.str; + description = '' + Machine identifier key. All processes on a machine should share a + unique id. By default, processes on a machine determine a unique id to share. + This does not generally need to be set. + ''; + }; + + zoneId = mkOption { + default = null; + type = types.nullOr types.str; + description = '' + Zone identifier key. Processes that share a zone id are + considered non-unique for the purposes of data replication. + If unset, defaults to machine id. + ''; + }; + + datacenterId = mkOption { + default = null; + type = types.nullOr types.str; + description = '' + Data center identifier key. All processes physically located in a + data center should share the id. If you are depending on data + center based replication this must be set on all processes. + ''; + }; + + dataHall = mkOption { + default = null; + type = types.nullOr types.str; + description = '' + Data hall identifier key. All processes physically located in a + data hall should share the id. If you are depending on data + hall based replication this must be set on all processes. + ''; + }; + }; + }); + }; + + extraReadWritePaths = mkOption { + default = [ ]; + type = types.listOf types.path; + description = '' + An extra set of filesystem paths that FoundationDB can read to + and write from. By default, FoundationDB runs under a heavily + namespaced systemd environment without write access to most of + the filesystem outside of its data and log directories. By + adding paths to this list, the set of writeable paths will be + expanded. This is useful for allowing e.g. backups to local files, + which must be performed on behalf of the foundationdb service. + ''; + }; + + pidfile = mkOption { + type = types.path; + default = "/run/foundationdb.pid"; + description = "Path to pidfile for fdbmonitor."; + }; + }; + + config = mkIf cfg.enable { + meta.doc = ./foundationdb.xml; + meta.maintainers = with lib.maintainers; [ thoughtpolice ]; + + environment.systemPackages = [ pkgs.foundationdb ]; + + users.extraUsers = optionalAttrs (cfg.user == "foundationdb") (singleton + { name = "foundationdb"; + description = "FoundationDB User"; + uid = config.ids.uids.foundationdb; + group = cfg.group; + }); + + users.extraGroups = optionalAttrs (cfg.group == "foundationdb") (singleton + { name = "foundationdb"; + gid = config.ids.gids.foundationdb; + }); + + networking.firewall.allowedTCPPortRanges = mkIf cfg.openFirewall + [ { from = cfg.listenPortStart; + to = (cfg.listenPortStart + cfg.serverProcesses) - 1; + } + ]; + + systemd.services.foundationdb = { + description = "FoundationDB Service"; + + after = [ "network.target" ]; + wantedBy = [ "multi-user.target" ]; + unitConfig = + { RequiresMountsFor = "${cfg.dataDir} ${cfg.logDir}"; + }; + + serviceConfig = + let rwpaths = [ cfg.dataDir cfg.logDir cfg.pidfile "/etc/foundationdb" ] + ++ cfg.extraReadWritePaths; + in + { Type = "simple"; + Restart = "always"; + RestartSec = 5; + User = cfg.user; + Group = cfg.group; + PIDFile = "${cfg.pidfile}"; + + PermissionsStartOnly = true; # setup needs root perms + TimeoutSec = 120; # give reasonable time to shut down + + # Security options + NoNewPrivileges = true; + ProtectHome = true; + ProtectSystem = "strict"; + ProtectKernelTunables = true; + ProtectControlGroups = true; + PrivateTmp = true; + PrivateDevices = true; + ReadWritePaths = lib.concatStringsSep " " (map (x: "-" + x) rwpaths); + }; + + path = [ pkgs.foundationdb pkgs.coreutils ]; + + preStart = '' + rm -f ${cfg.pidfile} && \ + touch ${cfg.pidfile} && \ + chown -R ${cfg.user}:${cfg.group} ${cfg.pidfile} + + for x in "${cfg.logDir}" "${cfg.dataDir}" /etc/foundationdb; do + [ ! -d "$x" ] && mkdir -m 0700 -vp "$x" && chown -R ${cfg.user}:${cfg.group} "$x"; + done + + if [ ! -f /etc/foundationdb/fdb.cluster ]; then + cf=/etc/foundationdb/fdb.cluster + desc=$(tr -dc A-Za-z0-9 </dev/urandom 2>/dev/null | head -c8) + rand=$(tr -dc A-Za-z0-9 </dev/urandom 2>/dev/null | head -c8) + echo ''${desc}:''${rand}@${initialIpAddr}:${builtins.toString cfg.listenPortStart} > $cf + chmod 0660 $cf && chown -R ${cfg.user}:${cfg.group} $cf + touch "${cfg.dataDir}/.first_startup" + fi + ''; + + script = '' + exec fdbmonitor --lockfile ${cfg.pidfile} --conffile ${configFile}; + ''; + + postStart = '' + if [ -e "${cfg.dataDir}/.first_startup" ]; then + fdbcli --exec "configure new single ssd" + rm -f "${cfg.dataDir}/.first_startup"; + fi + ''; + }; + }; +} diff --git a/nixos/modules/services/databases/foundationdb.xml b/nixos/modules/services/databases/foundationdb.xml new file mode 100644 index 000000000000..2a0e3c76c9d8 --- /dev/null +++ b/nixos/modules/services/databases/foundationdb.xml @@ -0,0 +1,280 @@ +<chapter xmlns="http://docbook.org/ns/docbook" + xmlns:xlink="http://www.w3.org/1999/xlink" + xmlns:xi="http://www.w3.org/2001/XInclude" + version="5.0" + xml:id="module-foundationdb"> + +<title>FoundationDB</title> + +<para><emphasis>Source:</emphasis> <filename>modules/services/databases/foundationdb.nix</filename></para> + +<para><emphasis>Upstream documentation:</emphasis> <link xlink:href="https://apple.github.io/foundationdb/"/></para> + +<para><emphasis>Maintainer:</emphasis> Austin Seipp</para> + +<para><emphasis>Default version:</emphasis> 5.1.x</para> + +<para>FoundationDB (or "FDB") is a distributed, open source, high performance, +transactional key-value store. It can store petabytes of data and deliver +exceptional performance while maintaining consistency and ACID semantics +(serializable transactions) over a large cluster.</para> + +<section><title>Configuring and basic setup</title> + +<para>To enable FoundationDB, add the following to your +<filename>configuration.nix</filename>: + +<programlisting> +services.foundationdb.enable = true; +</programlisting> +</para> + +<para>After running <command>nixos-rebuild</command>, you can verify whether +FoundationDB is running by executing <command>fdbcli</command> (which is added +to <option>environment.systemPackages</option>): + +<programlisting> +$ sudo -u foundationdb fdbcli +Using cluster file `/etc/foundationdb/fdb.cluster'. + +The database is available. + +Welcome to the fdbcli. For help, type `help'. +fdb> status + +Using cluster file `/etc/foundationdb/fdb.cluster'. + +Configuration: + Redundancy mode - single + Storage engine - memory + Coordinators - 1 + +Cluster: + FoundationDB processes - 1 + Machines - 1 + Memory availability - 5.4 GB per process on machine with least available + Fault Tolerance - 0 machines + Server time - 04/20/18 15:21:14 + +... + +fdb> +</programlisting> +</para> + +<para>FoundationDB is run under the <command>foundationdb</command> user and +group by default, but this may be changed in the NixOS configuration. The +systemd unit <command>foundationdb.service</command> controls the +<command>fdbmonitor</command> process.</para> + +<para>By default, the NixOS module for FoundationDB creates a single +SSD-storage based database for development and basic usage. This storage engine +is designed for SSDs and will perform poorly on HDDs; however it can handle far +more data than the alternative "memory" engine and is a better default choice +for most deployments. (Note that you can change the storage backend on-the-fly +for a given FoundationDB cluster using <command>fdbcli</command>.)</para> + +<para>Furthermore, only 1 server process and 1 backup agent are started in the +default configuration. See below for more on scaling to increase this.</para> + +<para>FoundationDB stores all data for all server processes under +<filename>/var/lib/foundationdb</filename>. You can override this using +<option>services.foundationdb.dataDir</option>, e.g. + +<programlisting> +services.foundationdb.dataDir = "/data/fdb"; +</programlisting> + +</para> + +<para>Similarly, logs are stored under +<filename>/var/log/foundationdb</filename> by default, and there is a +corresponding <option>services.foundationdb.logDir</option> as well.</para> + +</section> + +<section><title>Scaling processes and backup agents</title> + +<para>Scaling the number of server processes is quite easy; simply specify +<option>services.foundationdb.serverProcesses</option> to be the number of +FoundationDB worker processes that should be started on the machine.</para> + +<para>FoundationDB worker processes typically require 4GB of RAM per-process at +minimum for good performance, so this option is set to 1 by default since the +maximum amount of RAM is unknown. You're advised to abide by this restriction, +so pick a number of processes so that each has 4GB or more.</para> + +<para>A similar option exists in order to scale backup agent processes, +<option>services.foundationdb.backupProcesses</option>. Backup agents are not +as performance/RAM sensitive, so feel free to experiment with the number of +available backup processes.</para> + +</section> + +<section><title>Clustering</title> + +<para>FoundationDB on NixOS works similarly to other Linux systems, so this +section will be brief. Please refer to the full FoundationDB documentation for +more on clustering.</para> + +<para>FoundationDB organizes clusters using a set of +<emphasis>coordinators</emphasis>, which are just specially-designated worker +processes. By default, every installation of FoundationDB on NixOS will start +as its own individual cluster, with a single coordinator: the first worker +process on <command>localhost</command>.</para> + +<para>Coordinators are specified globally using the +<command>/etc/foundationdb/fdb.cluster</command> file, which all servers and +client applications will use to find and join coordinators. Note that this file +<emphasis>can not</emphasis> be managed by NixOS so easily: FoundationDB is +designed so that it will rewrite the file at runtime for all clients and nodes +when cluster coordinators change, with clients transparently handling this +without intervention. It is fundamentally a mutable file, and you should not +try to manage it in any way in NixOS.</para> + +<para>When dealing with a cluster, there are two main things you want to +do:</para> + +<itemizedlist> + <listitem><para>Add a node to the cluster for storage/compute.</para></listitem> + <listitem><para>Promote an ordinary worker to a coordinator.</para></listitem> +</itemizedlist> + +<para>A node must already be a member of the cluster in order to properly be +promoted to a coordinator, so you must always add it first if you wish to +promote it.</para> + +<para>To add a machine to a FoundationDB cluster:</para> + +<itemizedlist> + <listitem><para>Choose one of the servers to start as the initial coordinator. + </para></listitem> + <listitem><para>Copy the <command>/etc/foundationdb/fdb.cluster</command> file + from this server to all the other servers. Restart FoundationDB on all of + these other servers, so they join the cluster.</para></listitem> + <listitem><para>All of these servers are now connected and working together + in the cluster, under the chosen coordinator.</para></listitem> +</itemizedlist> + +<para>At this point, you can add as many nodes as you want by just repeating +the above steps. By default there will still be a single coordinator: you can +use <command>fdbcli</command> to change this and add new coordinators.</para> + +<para>As a convenience, FoundationDB can automatically assign coordinators +based on the redundancy mode you wish to achieve for the cluster. Once all the +nodes have been joined, simply set the replication policy, and then issue the +<command>coordinators auto</command> command</para> + +<para>For example, assuming we have 3 nodes available, we can enable double +redundancy mode, then auto-select coordinators. For double redundancy, 3 +coordinators is ideal: therefore FoundationDB will make +<emphasis>every</emphasis> node a coordinator automatically:</para> + +<programlisting> +fdbcli> configure double ssd +fdbcli> coordinators auto +</programlisting> + +<para>This will transparently update all the servers within seconds, and +appropriately rewrite the <command>fdb.cluster</command> file, as well as +informing all client processes to do the same.</para> + +</section> + +<section><title>Client connectivity</title> + +<para>By default, all clients must use the current +<command>fdb.cluster</command> file to access a given FoundationDB cluster. +This file is located by default in +<command>/etc/foundationdb/fdb.cluster</command> on all machines with the +FoundationDB service enabled, so you may copy the active one from your cluster +to a new node in order to connect, if it is not part of the cluster.</para> + +</section> + +<section><title>Backups and Disaster Recovery</title> + +<para>The usual rules for doing FoundationDB backups apply on NixOS as written +in the FoundationDB manual. However, one important difference is the security +profile for NixOS: by default, the <command>foundationdb</command> systemd unit +uses <emphasis>Linux namespaces</emphasis> to restrict write access to the +system, except for the log directory, data directory, and the +<command>/etc/foundationdb/</command> directory. This is enforced by default +and cannot be disabled.</para> + +<para>However, a side effect of this is that the <command>fdbbackup</command> +command doesn't work properly for local filesystem backups: FoundationDB uses a +server process alongside the database processes to perform backups and copy the +backups to the filesystem. As a result, this process is put under the +restricted namespaces above: the backup process can only write to a limited +number of paths.</para> + +<para>In order to allow flexible backup locations on local disks, the +FoundationDB NixOS module supports a +<option>services.foundationdb.extraReadWritePaths</option> option. This option +takes a list of paths, and adds them to the systemd unit, allowing the +processes inside the service to write (and read) the specified +directories.</para> + +<para>For example, to create backups in <command>/opt/fdb-backups</command>, +first set up the paths in the module options:</para> + +<programlisting> +services.foundationdb.extraReadWritePaths = [ "/opt/fdb-backups" ]; +</programlisting> + +<para>Restart the FoundationDB service, and it will now be able to write to +this directory (even if it does not yet exist.) Note: this path +<emphasis>must</emphasis> exist before restarting the unit. Otherwise, systemd +will not include it in the private FoundationDB namespace (and it will not add +it dynamically at runtime).</para> + +<para>You can now perform a backup:</para> + +<programlisting> +$ sudo -u foundationdb fdbbackup start -t default -d file:///opt/fdb-backups +$ sudo -u foundationdb fdbbackup status -t default +</programlisting> + +</section> + +<section><title>Known limitations</title> + +<para>The FoundationDB setup for NixOS should currently be considered beta. +FoundationDB is not new software, but the NixOS compilation and integration has +only undergone fairly basic testing of all the available functionality.</para> + +<itemizedlist> + <listitem><para>TLS plugin support is compiled in, but it's currently not + possible to specify the set of TLS certificate options in + <command>services.foundationdb</command></para></listitem> + <listitem><para>There is no way to specify individual parameters for + individual <command>fdbserver</command> processes. Currently, all server + processes inherit all the global <command>fdbmonitor</command> settings. + </para></listitem> + <listitem><para>Python bindings are not currently installed.</para></listitem> + <listitem><para>Ruby bindings are not currently installed.</para></listitem> + <listitem><para>Java bindings are not currently installed.</para></listitem> + <listitem><para>Go bindings are not currently installed.</para></listitem> +</itemizedlist> + +</section> + +<section><title>Options</title> + +<para>NixOS's FoundationDB module allows you to configure all of the most +relevant configuration options for <command>fdbmonitor</command>, matching it +quite closely. For a complete list of all options, check <command>man +configuration.nix</command>.</para> + +</section> + +<section><title>Full documentation</title> + +<para>FoundationDB is a complex piece of software, and requires careful +administration to properly use. Full documentation for administration can be +found here: <link xlink:href="https://apple.github.io/foundationdb/"/>.</para> + +</section> + +</chapter> diff --git a/nixos/modules/services/databases/pgmanage.nix b/nixos/modules/services/databases/pgmanage.nix index 86733a3e5a07..d1b48c06440e 100644 --- a/nixos/modules/services/databases/pgmanage.nix +++ b/nixos/modules/services/databases/pgmanage.nix @@ -22,7 +22,7 @@ let web_root = ${cfg.package}/etc/pgmanage/web_root - data_root = ${cfg.dataRoot} + sql_root = ${cfg.sqlRoot} ${optionalString (!isNull cfg.tls) '' tls_cert = ${cfg.tls.cert} @@ -130,7 +130,7 @@ let ''; }; - dataRoot = mkOption { + sqlRoot = mkOption { type = types.str; default = "/var/lib/pgmanage"; description = '' @@ -210,7 +210,7 @@ in { users."${pgmanage}" = { name = pgmanage; group = pgmanage; - home = cfg.dataRoot; + home = cfg.sqlRoot; createHome = true; }; groups."${pgmanage}" = { diff --git a/nixos/modules/services/editors/emacs.nix b/nixos/modules/services/editors/emacs.nix index bbc9bcf3dae1..ba7ec967919e 100644 --- a/nixos/modules/services/editors/emacs.nix +++ b/nixos/modules/services/editors/emacs.nix @@ -15,6 +15,25 @@ let fi ''; +desktopApplicationFile = pkgs.writeTextFile { + name = "emacsclient.desktop"; + destination = "/share/applications/emacsclient.desktop"; + text = '' +[Desktop Entry] +Name=Emacsclient +GenericName=Text Editor +Comment=Edit text +MimeType=text/english;text/plain;text/x-makefile;text/x-c++hdr;text/x-c++src;text/x-chdr;text/x-csrc;text/x-java;text/x-moc;text/x-pascal;text/x-tcl;text/x-tex;application/x-shellscript;text/x-c;text/x-c++; +Exec=emacseditor %F +Icon=emacs +Type=Application +Terminal=false +Categories=Development;TextEditor; +StartupWMClass=Emacs +Keywords=Text;Editor; +''; +}; + in { options.services.emacs = { @@ -74,7 +93,7 @@ in { }; } // optionalAttrs cfg.enable { wantedBy = [ "default.target" ]; }; - environment.systemPackages = [ cfg.package editorScript ]; + environment.systemPackages = [ cfg.package editorScript desktopApplicationFile ]; environment.variables = { # This is required so that GTK applications launched from Emacs diff --git a/nixos/modules/services/hardware/bluetooth.nix b/nixos/modules/services/hardware/bluetooth.nix index 4a8cd86b0b11..d7ca8a431794 100644 --- a/nixos/modules/services/hardware/bluetooth.nix +++ b/nixos/modules/services/hardware/bluetooth.nix @@ -3,8 +3,8 @@ with lib; let - bluez-bluetooth = pkgs.bluez; cfg = config.hardware.bluetooth; + bluez-bluetooth = cfg.package; in { @@ -21,6 +21,16 @@ in { description = "Whether to power up the default Bluetooth controller on boot."; }; + package = mkOption { + type = types.package; + default = pkgs.bluez; + defaultText = "pkgs.bluez"; + example = "pkgs.bluez.override { enableMidi = true; }"; + description = '' + Which BlueZ package to use. + ''; + }; + extraConfig = mkOption { type = types.lines; default = ""; diff --git a/nixos/modules/services/hardware/trezord.nix b/nixos/modules/services/hardware/trezord.nix index fa0496114684..f2ec00a7d3e1 100644 --- a/nixos/modules/services/hardware/trezord.nix +++ b/nixos/modules/services/hardware/trezord.nix @@ -26,8 +26,15 @@ in { name = "trezord-udev-rules"; destination = "/etc/udev/rules.d/51-trezor.rules"; text = '' - SUBSYSTEM=="usb", ATTR{idVendor}=="534c", ATTR{idProduct}=="0001", MODE="0666", GROUP="dialout", SYMLINK+="trezor%n" - KERNEL=="hidraw*", ATTRS{idVendor}=="534c", ATTRS{idProduct}=="0001", MODE="0666", GROUP="dialout" + # Trezor 1 + SUBSYSTEM=="usb", ATTR{idVendor}=="534c", ATTR{idProduct}=="0001", MODE="0666", GROUP="dialout", SYMLINK+="trezor%n" + KERNEL=="hidraw*", ATTRS{idVendor}=="534c", ATTRS{idProduct}=="0001", MODE="0666", GROUP="dialout" + + # Trezor 2 (Model-T) + SUBSYSTEM=="usb", ATTR{idVendor}=="1209", ATTR{idProduct}=="53c0", MODE="0661", GROUP="dialout", TAG+="uaccess", TAG+="udev-acl", SYMLINK+="trezor%n" + SUBSYSTEM=="usb", ATTR{idVendor}=="1209", ATTR{idProduct}=="53c1", MODE="0660", GROUP="dialout", TAG+="uaccess", TAG+="udev-acl", SYMLINK+="trezor%n" + KERNEL=="hidraw*", ATTRS{idVendor}=="1209", ATTRS{idProduct}=="53c1", MODE="0660", GROUP="dialout", TAG+="uaccess", TAG+="udev-acl" + ]; ''; }); diff --git a/nixos/modules/services/misc/dysnomia.nix b/nixos/modules/services/misc/dysnomia.nix index 25cd0038e36d..9e66e0811ab7 100644 --- a/nixos/modules/services/misc/dysnomia.nix +++ b/nixos/modules/services/misc/dysnomia.nix @@ -158,7 +158,7 @@ in services.dysnomia.properties = { hostname = config.networking.hostName; - system = if config.nixpkgs.system == "" then builtins.currentSystem else config.nixpkgs.system; + inherit (config.nixpkgs.localSystem) system; supportedTypes = (import "${pkgs.stdenv.mkDerivation { name = "supportedtypes"; diff --git a/nixos/modules/services/misc/gitweb.nix b/nixos/modules/services/misc/gitweb.nix index b0e34a690ca5..ca21366b7796 100644 --- a/nixos/modules/services/misc/gitweb.nix +++ b/nixos/modules/services/misc/gitweb.nix @@ -32,6 +32,14 @@ in ''; }; + gitwebTheme = mkOption { + default = false; + type = types.bool; + description = '' + Use an alternative theme for gitweb, strongly inspired by GitHub. + ''; + }; + gitwebConfigFile = mkOption { default = pkgs.writeText "gitweb.conf" '' # path to git projects (<project>.git) diff --git a/nixos/modules/services/misc/home-assistant.nix b/nixos/modules/services/misc/home-assistant.nix index ac37c11106ef..1dc7b44ee37b 100644 --- a/nixos/modules/services/misc/home-assistant.nix +++ b/nixos/modules/services/misc/home-assistant.nix @@ -5,7 +5,10 @@ with lib; let cfg = config.services.home-assistant; - configFile = pkgs.writeText "configuration.yaml" (builtins.toJSON cfg.config); + # cfg.config != null can be assumed here + configFile = pkgs.writeText "configuration.json" + (builtins.toJSON (if cfg.applyDefaultConfig then + (lib.recursiveUpdate defaultConfig cfg.config) else cfg.config)); availableComponents = pkgs.home-assistant.availableComponents; @@ -38,6 +41,12 @@ let then (cfg.package.override { inherit extraComponents; }) else cfg.package; + # If you are changing this, please update the description in applyDefaultConfig + defaultConfig = { + homeassistant.time_zone = config.time.timeZone; + http.server_port = (toString cfg.port); + }; + in { meta.maintainers = with maintainers; [ dotlambda ]; @@ -50,6 +59,26 @@ in { description = "The config directory, where your <filename>configuration.yaml</filename> is located."; }; + port = mkOption { + default = 8123; + type = types.int; + description = "The port on which to listen."; + }; + + applyDefaultConfig = mkOption { + default = true; + type = types.bool; + description = '' + Setting this option enables a few configuration options for HA based on NixOS configuration (such as time zone) to avoid having to manually specify configuration we already have. + </para> + <para> + Currently one side effect of enabling this is that the <literal>http</literal> component will be enabled. + </para> + <para> + This only takes effect if <literal>config != null</literal> in order to ensure that a manually managed <filename>configuration.yaml</filename> is not overwritten. + ''; + }; + config = mkOption { default = null; type = with types; nullOr attrs; @@ -106,19 +135,20 @@ in { description = "Home Assistant"; after = [ "network.target" ]; preStart = lib.optionalString (cfg.config != null) '' - rm -f ${cfg.configDir}/configuration.yaml - ln -s ${configFile} ${cfg.configDir}/configuration.yaml + config=${cfg.configDir}/configuration.yaml + rm -f $config + ${pkgs.remarshal}/bin/json2yaml -i ${configFile} -o $config + chmod 444 $config ''; serviceConfig = { - ExecStart = '' - ${package}/bin/hass --config "${cfg.configDir}" - ''; + ExecStart = "${package}/bin/hass --config '${cfg.configDir}'"; User = "hass"; Group = "hass"; Restart = "on-failure"; ProtectSystem = "strict"; ReadWritePaths = "${cfg.configDir}"; PrivateTmp = true; + RemoveIPC = true; }; path = [ "/run/wrappers" # needed for ping diff --git a/nixos/modules/services/misc/logkeys.nix b/nixos/modules/services/misc/logkeys.nix index df0b3ae24c90..ad13d9eaa674 100644 --- a/nixos/modules/services/misc/logkeys.nix +++ b/nixos/modules/services/misc/logkeys.nix @@ -7,6 +7,13 @@ let in { options.services.logkeys = { enable = mkEnableOption "logkeys service"; + + device = mkOption { + description = "Use the given device as keyboard input event device instead of /dev/input/eventX default."; + default = null; + type = types.nullOr types.string; + example = "/dev/input/event15"; + }; }; config = mkIf cfg.enable { @@ -14,7 +21,7 @@ in { description = "LogKeys Keylogger Daemon"; wantedBy = [ "multi-user.target" ]; serviceConfig = { - ExecStart = "${pkgs.logkeys}/bin/logkeys -s"; + ExecStart = "${pkgs.logkeys}/bin/logkeys -s${lib.optionalString (cfg.device != null) " -d ${cfg.device}"}"; ExecStop = "${pkgs.logkeys}/bin/logkeys -k"; Type = "forking"; }; diff --git a/nixos/modules/services/misc/mesos-slave.nix b/nixos/modules/services/misc/mesos-slave.nix index 12485141e219..effa29b64f63 100644 --- a/nixos/modules/services/misc/mesos-slave.nix +++ b/nixos/modules/services/misc/mesos-slave.nix @@ -213,7 +213,7 @@ in { PermissionsStartOnly = true; }; preStart = '' - mkdir -m 0700 -p ${cfg.workDir} + mkdir -m 0701 -p ${cfg.workDir} ''; }; }; diff --git a/nixos/modules/services/misc/nixos-manual.nix b/nixos/modules/services/misc/nixos-manual.nix index abf506ea7c67..4bd1c20edf71 100644 --- a/nixos/modules/services/misc/nixos-manual.nix +++ b/nixos/modules/services/misc/nixos-manual.nix @@ -23,7 +23,7 @@ let options = let scrubbedEval = evalModules { - modules = [ { nixpkgs.system = config.nixpkgs.system; } ] ++ baseModules; + modules = [ { nixpkgs.localSystem = config.nixpkgs.localSystem; } ] ++ baseModules; args = (config._module.args) // { modules = [ ]; }; specialArgs = { pkgs = scrubDerivations "pkgs" pkgs; }; }; diff --git a/nixos/modules/services/monitoring/grafana.nix b/nixos/modules/services/monitoring/grafana.nix index a5b6dbab1577..eceb91525db4 100644 --- a/nixos/modules/services/monitoring/grafana.nix +++ b/nixos/modules/services/monitoring/grafana.nix @@ -50,7 +50,7 @@ in { protocol = mkOption { description = "Which protocol to listen."; default = "http"; - type = types.enum ["http" "https"]; + type = types.enum ["http" "https" "socket"]; }; addr = mkOption { diff --git a/nixos/modules/services/monitoring/prometheus/exporters.nix b/nixos/modules/services/monitoring/prometheus/exporters.nix index 8d6ca1e40a19..180b273d177e 100644 --- a/nixos/modules/services/monitoring/prometheus/exporters.nix +++ b/nixos/modules/services/monitoring/prometheus/exporters.nix @@ -20,6 +20,7 @@ let exporterOpts = { blackbox = import ./exporters/blackbox.nix { inherit config lib pkgs; }; collectd = import ./exporters/collectd.nix { inherit config lib pkgs; }; + dovecot = import ./exporters/dovecot.nix { inherit config lib pkgs; }; fritzbox = import ./exporters/fritzbox.nix { inherit config lib pkgs; }; json = import ./exporters/json.nix { inherit config lib pkgs; }; minio = import ./exporters/minio.nix { inherit config lib pkgs; }; diff --git a/nixos/modules/services/monitoring/prometheus/exporters/dovecot.nix b/nixos/modules/services/monitoring/prometheus/exporters/dovecot.nix new file mode 100644 index 000000000000..4ca6d4e5f8b6 --- /dev/null +++ b/nixos/modules/services/monitoring/prometheus/exporters/dovecot.nix @@ -0,0 +1,50 @@ +{ config, lib, pkgs }: + +with lib; + +let + cfg = config.services.prometheus.exporters.dovecot; +in +{ + port = 9166; + extraOpts = { + telemetryPath = mkOption { + type = types.str; + default = "/metrics"; + description = '' + Path under which to expose metrics. + ''; + }; + socketPath = mkOption { + type = types.path; + default = "/var/run/dovecot/stats"; + example = "/var/run/dovecot2/stats"; + description = '' + Path under which the stats socket is placed. + The user/group under which the exporter runs, + should be able to access the socket in order + to scrape the metrics successfully. + ''; + }; + scopes = mkOption { + type = types.listOf types.str; + default = [ "user" ]; + example = [ "user" "global" ]; + description = '' + Stats scopes to query. + ''; + }; + }; + serviceOpts = { + serviceConfig = { + ExecStart = '' + ${pkgs.prometheus-dovecot-exporter}/bin/dovecot_exporter \ + --web.listen-address ${cfg.listenAddress}:${toString cfg.port} \ + --web.telemetry-path ${cfg.telemetryPath} \ + --dovecot.socket-path ${cfg.socketPath} \ + --dovecot.scopes ${concatStringsSep "," cfg.scopes} \ + ${concatStringsSep " \\\n " cfg.extraFlags} + ''; + }; + }; +} diff --git a/nixos/modules/services/monitoring/prometheus/exporters/postfix.nix b/nixos/modules/services/monitoring/prometheus/exporters/postfix.nix index 1e909aa27d83..efe78ebcba86 100644 --- a/nixos/modules/services/monitoring/prometheus/exporters/postfix.nix +++ b/nixos/modules/services/monitoring/prometheus/exporters/postfix.nix @@ -32,6 +32,33 @@ in Path where Postfix places it's showq socket. ''; }; + systemd = { + enable = mkEnableOption '' + reading metrics from the systemd-journal instead of from a logfile + ''; + unit = mkOption { + type = types.str; + default = "postfix.service"; + description = '' + Name of the postfix systemd unit. + ''; + }; + slice = mkOption { + type = types.nullOr types.str; + default = null; + description = '' + Name of the postfix systemd slice. + This overrides the <option>systemd.unit</option>. + ''; + }; + journalPath = mkOption { + type = types.nullOr types.path; + default = null; + description = '' + Path to the systemd journal. + ''; + }; + }; }; serviceOpts = { serviceConfig = { @@ -39,7 +66,15 @@ in ${pkgs.prometheus-postfix-exporter}/bin/postfix_exporter \ --web.listen-address ${cfg.listenAddress}:${toString cfg.port} \ --web.telemetry-path ${cfg.telemetryPath} \ - ${concatStringsSep " \\\n " cfg.extraFlags} + --postfix.showq_path ${cfg.showqPath} \ + ${concatStringsSep " \\\n " (cfg.extraFlags + ++ optional cfg.systemd.enable "--systemd.enable" + ++ optional cfg.systemd.enable (if cfg.systemd.slice != null + then "--systemd.slice ${cfg.systemd.slice}" + else "--systemd.unit ${cfg.systemd.unit}") + ++ optional (cfg.systemd.enable && (cfg.systemd.journalPath != null)) + "--systemd.jounal_path ${cfg.systemd.journalPath}" + ++ optional (!cfg.systemd.enable) "--postfix.logfile_path ${cfg.logfilePath}")} ''; }; }; diff --git a/nixos/modules/services/networking/ddclient.nix b/nixos/modules/services/networking/ddclient.nix index 9e56545f746c..9a2e13e9553c 100644 --- a/nixos/modules/services/networking/ddclient.nix +++ b/nixos/modules/services/networking/ddclient.nix @@ -3,24 +3,24 @@ let cfg = config.services.ddclient; boolToStr = bool: if bool then "yes" else "no"; + dataDir = "/var/lib/ddclient"; configText = '' # This file can be used as a template for configFile or is automatically generated by Nix options. - daemon=${toString cfg.interval} - cache=${cfg.homeDir}/ddclient.cache - pid=/run/ddclient/ddclient.pid - foreground=NO + cache=${dataDir}/ddclient.cache + foreground=YES use=${cfg.use} login=${cfg.username} password=${cfg.password} protocol=${cfg.protocol} - ${let server = cfg.server; in - lib.optionalString (server != "") "server=${server}"} + ${lib.optionalString (cfg.script != "") "script=${cfg.script}"} + ${lib.optionalString (cfg.server != "") "server=${cfg.server}"} + ${lib.optionalString (cfg.zone != "") "zone=${cfg.zone}"} ssl=${boolToStr cfg.ssl} wildcard=YES quiet=${boolToStr cfg.quiet} verbose=${boolToStr cfg.verbose} - ${cfg.domain} + ${lib.concatStringsSep "," cfg.domains} ${cfg.extraConfig} ''; @@ -44,17 +44,11 @@ with lib; ''; }; - homeDir = mkOption { - default = "/var/lib/ddclient"; - type = str; - description = "Home directory for the daemon user."; - }; - - domain = mkOption { - default = ""; - type = str; + domains = mkOption { + default = [ "" ]; + type = listOf str; description = '' - Domain name to synchronize. + Domain name(s) to synchronize. ''; }; @@ -62,7 +56,7 @@ with lib; default = ""; type = str; description = '' - Username. + User name. ''; }; @@ -75,9 +69,12 @@ with lib; }; interval = mkOption { - default = 600; - type = int; - description = "The interval at which to run the check and update."; + default = "10min"; + type = str; + description = '' + The interval at which to run the check and update. + See <command>man 7 systemd.time</command> for the format. + ''; }; configFile = mkOption { @@ -95,7 +92,7 @@ with lib; default = "dyndns2"; type = str; description = '' - Protocol to use with dynamic DNS provider (see http://sourceforge.net/apps/trac/ddclient/wiki/Protocols). + Protocol to use with dynamic DNS provider (see https://sourceforge.net/p/ddclient/wiki/protocols). ''; }; @@ -115,11 +112,20 @@ with lib; ''; }; - extraConfig = mkOption { + + quiet = mkOption { + default = false; + type = bool; + description = '' + Print no messages for unnecessary updates. + ''; + }; + + script = mkOption { default = ""; - type = lines; + type = str; description = '' - Extra configuration. Contents will be added verbatim to the configuration file. + script as required by some providers. ''; }; @@ -139,11 +145,19 @@ with lib; ''; }; - quiet = mkOption { - default = false; - type = bool; + zone = mkOption { + default = ""; + type = str; description = '' - Print no messages for unnecessary updates. + zone as required by some providers. + ''; + }; + + extraConfig = mkOption { + default = ""; + type = lines; + description = '' + Extra configuration. Contents will be added verbatim to the configuration file. ''; }; }; @@ -153,23 +167,8 @@ with lib; ###### implementation config = mkIf config.services.ddclient.enable { - - users = { - extraGroups.ddclient.gid = config.ids.gids.ddclient; - - extraUsers.ddclient = { - uid = config.ids.uids.ddclient; - description = "ddclient daemon user"; - group = "ddclient"; - home = cfg.homeDir; - createHome = true; - }; - }; - environment.etc."ddclient.conf" = { enable = cfg.configFile == "/etc/ddclient.conf"; - uid = config.ids.uids.ddclient; - gid = config.ids.gids.ddclient; mode = "0600"; text = configText; }; @@ -180,15 +179,22 @@ with lib; after = [ "network.target" ]; restartTriggers = [ config.environment.etc."ddclient.conf".source ]; - serviceConfig = { - RuntimeDirectory = "ddclient"; - # we cannot run in forking mode as it swallows all the program output - Type = "simple"; - User = "ddclient"; - Group = "ddclient"; - ExecStart = "${lib.getBin pkgs.ddclient}/bin/ddclient -foreground -file ${cfg.configFile}"; - ProtectSystem = "full"; - PrivateTmp = true; + serviceConfig = rec { + DynamicUser = true; + RuntimeDirectory = StateDirectory; + StateDirectory = builtins.baseNameOf dataDir; + Type = "oneshot"; + ExecStartPre = "!${lib.getBin pkgs.coreutils}/bin/install -m666 ${cfg.configFile} /run/${RuntimeDirectory}/ddclient.conf"; + ExecStart = "${lib.getBin pkgs.ddclient}/bin/ddclient -file /run/${RuntimeDirectory}/ddclient.conf"; + }; + }; + + systemd.timers.ddclient = { + description = "Run ddclient"; + wantedBy = [ "timers.target" ]; + timerConfig = { + OnBootSec = cfg.interval; + OnUnitInactiveSec = cfg.interval; }; }; }; diff --git a/nixos/modules/services/networking/dnscache.nix b/nixos/modules/services/networking/dnscache.nix index 379203cd1ab6..ba5c8e2d5e53 100644 --- a/nixos/modules/services/networking/dnscache.nix +++ b/nixos/modules/services/networking/dnscache.nix @@ -9,12 +9,12 @@ let mkdir -p $out/{servers,ip} ${concatMapStrings (ip: '' - echo > "$out/ip/"${lib.escapeShellArg ip} + touch "$out/ip/"${lib.escapeShellArg ip} '') cfg.clientIps} ${concatStrings (mapAttrsToList (host: ips: '' ${concatMapStrings (ip: '' - echo ${lib.escapeShellArg ip} > "$out/servers/"${lib.escapeShellArg host} + echo ${lib.escapeShellArg ip} >> "$out/servers/"${lib.escapeShellArg host} '') ips} '') cfg.domainServers)} @@ -34,33 +34,49 @@ in { options = { services.dnscache = { + enable = mkOption { default = false; type = types.bool; - description = "Whether to run the dnscache caching dns server"; + description = "Whether to run the dnscache caching dns server."; }; ip = mkOption { default = "0.0.0.0"; type = types.str; - description = "IP address on which to listen for connections"; + description = "IP address on which to listen for connections."; }; clientIps = mkOption { default = [ "127.0.0.1" ]; type = types.listOf types.str; - description = "client IP addresses (or prefixes) from which to accept connections"; + description = "Client IP addresses (or prefixes) from which to accept connections."; example = ["192.168" "172.23.75.82"]; }; domainServers = mkOption { default = { }; type = types.attrsOf (types.listOf types.str); - description = "table of {hostname: server} pairs to use as authoritative servers for hosts (and subhosts)"; + description = '' + Table of {hostname: server} pairs to use as authoritative servers for hosts (and subhosts). + If entry for @ is not specified predefined list of root servers is used. + ''; example = { - "example.com" = ["8.8.8.8" "8.8.4.4"]; + "@" = ["8.8.8.8" "8.8.4.4"]; + "example.com" = ["192.168.100.100"]; }; }; + + forwardOnly = mkOption { + default = false; + type = types.bool; + description = '' + Whether to treat root servers (for @) as caching + servers, requesting addresses the same way a client does. This is + needed if you want to use e.g. Google DNS as your upstream DNS. + ''; + }; + }; }; @@ -82,6 +98,7 @@ in { ''; script = '' cd /var/lib/dnscache/ + ${optionalString cfg.forwardOnly "export FORWARDONLY=1"} exec ./run ''; }; diff --git a/nixos/modules/services/networking/hans.nix b/nixos/modules/services/networking/hans.nix new file mode 100644 index 000000000000..dd34ef8d4ca1 --- /dev/null +++ b/nixos/modules/services/networking/hans.nix @@ -0,0 +1,145 @@ +# NixOS module for hans, ip over icmp daemon + +{ config, lib, pkgs, ... }: + +with lib; + +let + cfg = config.services.hans; + + hansUser = "hans"; + +in +{ + + ### configuration + + options = { + + services.hans = { + clients = mkOption { + default = {}; + description = '' + Each attribute of this option defines a systemd service that + runs hans. Many or none may be defined. + The name of each service is + <literal>hans-<replaceable>name</replaceable></literal> + where <replaceable>name</replaceable> is the name of the + corresponding attribute name. + ''; + example = literalExample '' + { + foo = { + server = "192.0.2.1"; + extraConfig = "-v"; + } + } + ''; + type = types.attrsOf (types.submodule ( + { + options = { + server = mkOption { + type = types.str; + default = ""; + description = "IP address of server running hans"; + example = "192.0.2.1"; + }; + + extraConfig = mkOption { + type = types.str; + default = ""; + description = "Additional command line parameters"; + example = "-v"; + }; + + passwordFile = mkOption { + type = types.str; + default = ""; + description = "File that containts password"; + }; + + }; + })); + }; + + server = { + enable = mkOption { + type = types.bool; + default = false; + description = "enable hans server"; + }; + + ip = mkOption { + type = types.str; + default = ""; + description = "The assigned ip range"; + example = "198.51.100.0"; + }; + + respondToSystemPings = mkOption { + type = types.bool; + default = false; + description = "Force hans respond to ordinary pings"; + }; + + extraConfig = mkOption { + type = types.str; + default = ""; + description = "Additional command line parameters"; + example = "-v"; + }; + + passwordFile = mkOption { + type = types.str; + default = ""; + description = "File that containts password"; + }; + }; + + }; + }; + + ### implementation + + config = mkIf (cfg.server.enable || cfg.clients != {}) { + boot.kernel.sysctl = optionalAttrs cfg.server.respondToSystemPings { + "net.ipv4.icmp_echo_ignore_all" = 1; + }; + + boot.kernelModules = [ "tun" ]; + + systemd.services = + let + createHansClientService = name: cfg: + { + description = "hans client - ${name}"; + after = [ "network.target" ]; + wantedBy = [ "multi-user.target" ]; + script = "${pkgs.hans}/bin/hans -f -u ${hansUser} ${cfg.extraConfig} -c ${cfg.server} ${optionalString (cfg.passwordFile != "") "-p $(cat \"${cfg.passwordFile}\")"}"; + serviceConfig = { + RestartSec = "30s"; + Restart = "always"; + }; + }; + in + listToAttrs ( + mapAttrsToList + (name: value: nameValuePair "hans-${name}" (createHansClientService name value)) + cfg.clients + ) // { + hans = mkIf (cfg.server.enable) { + description = "hans, ip over icmp server daemon"; + after = [ "network.target" ]; + wantedBy = [ "multi-user.target" ]; + script = "${pkgs.hans}/bin/hans -f -u ${hansUser} ${cfg.server.extraConfig} -s ${cfg.server.ip} ${optionalString cfg.server.respondToSystemPings "-r"} ${optionalString (cfg.server.passwordFile != "") "-p $(cat \"${cfg.server.passwordFile}\")"}"; + }; + }; + + users.extraUsers = singleton { + name = hansUser; + description = "Hans daemon user"; + }; + }; + + meta.maintainers = with maintainers; [ gnidorah ]; +} diff --git a/nixos/modules/services/networking/iodine.nix b/nixos/modules/services/networking/iodine.nix index 512dbd77ae4b..3f41421d27f7 100644 --- a/nixos/modules/services/networking/iodine.nix +++ b/nixos/modules/services/networking/iodine.nix @@ -32,7 +32,7 @@ in foo = { server = "tunnel.mdomain.com"; relay = "8.8.8.8"; - extraConfig = "-P mysecurepassword"; + extraConfig = "-v"; } } ''; @@ -57,7 +57,13 @@ in type = types.str; default = ""; description = "Additional command line parameters"; - example = "-P mysecurepassword -l 192.168.1.10 -p 23"; + example = "-l 192.168.1.10 -p 23"; + }; + + passwordFile = mkOption { + type = types.str; + default = ""; + description = "File that containts password"; }; }; })); @@ -88,7 +94,13 @@ in type = types.str; default = ""; description = "Additional command line parameters"; - example = "-P mysecurepassword -l 192.168.1.10 -p 23"; + example = "-l 192.168.1.10 -p 23"; + }; + + passwordFile = mkOption { + type = types.str; + default = ""; + description = "File that containts password"; }; }; @@ -108,10 +120,10 @@ in description = "iodine client - ${name}"; after = [ "network.target" ]; wantedBy = [ "multi-user.target" ]; + script = "${pkgs.iodine}/bin/iodine -f -u ${iodinedUser} ${cfg.extraConfig} ${optionalString (cfg.passwordFile != "") "-P $(cat \"${cfg.passwordFile}\")"} ${cfg.relay} ${cfg.server}"; serviceConfig = { RestartSec = "30s"; Restart = "always"; - ExecStart = "${pkgs.iodine}/bin/iodine -f -u ${iodinedUser} ${cfg.extraConfig} ${cfg.relay} ${cfg.server}"; }; }; in @@ -124,7 +136,7 @@ in description = "iodine, ip over dns server daemon"; after = [ "network.target" ]; wantedBy = [ "multi-user.target" ]; - serviceConfig.ExecStart = "${pkgs.iodine}/bin/iodined -f -u ${iodinedUser} ${cfg.server.extraConfig} ${cfg.server.ip} ${cfg.server.domain}"; + script = "${pkgs.iodine}/bin/iodined -f -u ${iodinedUser} ${cfg.server.extraConfig} ${optionalString (cfg.server.passwordFile != "") "-P $(cat \"${cfg.server.passwordFile}\")"} ${cfg.server.ip} ${cfg.server.domain}"; }; }; diff --git a/nixos/modules/services/networking/iwd.nix b/nixos/modules/services/networking/iwd.nix index 23787bce9911..344212ad8329 100644 --- a/nixos/modules/services/networking/iwd.nix +++ b/nixos/modules/services/networking/iwd.nix @@ -26,7 +26,7 @@ in { wants = [ "network.target" ]; wantedBy = [ "multi-user.target" ]; - serviceConfig.ExecStart = "${pkgs.iwd}/bin/iwd"; + serviceConfig.ExecStart = "${pkgs.iwd}/libexec/iwd"; }; }; diff --git a/nixos/modules/services/networking/murmur.nix b/nixos/modules/services/networking/murmur.nix index 13d7c3254f9d..873d62dbf341 100644 --- a/nixos/modules/services/networking/murmur.nix +++ b/nixos/modules/services/networking/murmur.nix @@ -80,7 +80,7 @@ in pidfile = mkOption { type = types.path; - default = "/tmp/murmurd.pid"; + default = "/run/murmur/murmurd.pid"; description = "Path to PID file for Murmur daemon."; }; @@ -252,6 +252,7 @@ in serviceConfig = { Type = "forking"; + RuntimeDirectory = "murmur"; PIDFile = cfg.pidfile; Restart = "always"; User = "murmur"; diff --git a/nixos/modules/services/networking/nsd.nix b/nixos/modules/services/networking/nsd.nix index 4241e6fcceab..0b52b1d3e302 100644 --- a/nixos/modules/services/networking/nsd.nix +++ b/nixos/modules/services/networking/nsd.nix @@ -250,6 +250,46 @@ let Use imports or pkgs.lib.readFile if you don't want this data in your config file. ''; }; + + dnssec = mkEnableOption "DNSSEC"; + + dnssecPolicy = { + algorithm = mkOption { + type = types.str; + default = "RSASHA256"; + description = "Which algorithm to use for DNSSEC"; + }; + keyttl = mkOption { + type = types.str; + default = "1h"; + description = "TTL for dnssec records"; + }; + coverage = mkOption { + type = types.str; + default = "1y"; + description = '' + The length of time to ensure that keys will be correct; no action will be taken to create new keys to be activated after this time. + ''; + }; + zsk = mkOption { + type = keyPolicy; + default = { keySize = 2048; + prePublish = "1w"; + postPublish = "1w"; + rollPeriod = "1mo"; + }; + description = "Key policy for zone signing keys"; + }; + ksk = mkOption { + type = keyPolicy; + default = { keySize = 4096; + prePublish = "1mo"; + postPublish = "1mo"; + rollPeriod = "0"; + }; + description = "Key policy for key signing keys"; + }; + }; maxRefreshSecs = mkOption { type = types.nullOr types.int; @@ -367,10 +407,61 @@ let and stats_noreset. ''; }; + }; + }; + keyPolicy = types.submodule { + options = { + keySize = mkOption { + type = types.int; + description = "Key size in bits"; + }; + prePublish = mkOption { + type = types.str; + description = "How long in advance to publish new keys"; + }; + postPublish = mkOption { + type = types.str; + description = "How long after deactivation to keep a key in the zone"; + }; + rollPeriod = mkOption { + type = types.str; + description = "How frequently to change keys"; + }; }; }; + dnssecZones = (filterAttrs (n: v: if v ? dnssec then v.dnssec else false) zoneConfigs); + + dnssec = length (attrNames dnssecZones) != 0; + + signZones = optionalString dnssec '' + mkdir -p ${stateDir}/dnssec + chown ${username}:${username} ${stateDir}/dnssec + chmod 0600 ${stateDir}/dnssec + + ${concatStrings (mapAttrsToList signZone dnssecZones)} + ''; + signZone = name: zone: '' + ${pkgs.bind}/bin/dnssec-keymgr -g ${pkgs.bind}/bin/dnssec-keygen -s ${pkgs.bind}/bin/dnssec-settime -K ${stateDir}/dnssec -c ${policyFile name zone.dnssecPolicy} ${name} + ${pkgs.bind}/bin/dnssec-signzone -S -K ${stateDir}/dnssec -o ${name} -O full -N date ${stateDir}/zones/${name} + ${nsdPkg}/sbin/nsd-checkzone ${name} ${stateDir}/zones/${name}.signed && mv -v ${stateDir}/zones/${name}.signed ${stateDir}/zones/${name} + ''; + policyFile = name: policy: pkgs.writeText "${name}.policy" '' + zone ${name} { + algorithm ${policy.algorithm}; + key-size zsk ${toString policy.zsk.keySize}; + key-size ksk ${toString policy.ksk.keySize}; + keyttl ${policy.keyttl}; + pre-publish zsk ${policy.zsk.prePublish}; + pre-publish ksk ${policy.ksk.prePublish}; + post-publish zsk ${policy.zsk.postPublish}; + post-publish ksk ${policy.ksk.postPublish}; + roll-period zsk ${policy.zsk.rollPeriod}; + roll-period ksk ${policy.ksk.rollPeriod}; + coverage ${policy.coverage}; + }; + ''; in { # options are ordered alphanumerically @@ -380,6 +471,14 @@ in bind8Stats = mkEnableOption "BIND8 like statistics"; + dnssecInterval = mkOption { + type = types.str; + default = "1h"; + description = '' + How often to check whether dnssec key rollover is required + ''; + }; + extraConfig = mkOption { type = types.str; default = ""; @@ -741,7 +840,6 @@ in }; - zones = mkOption { type = types.attrsOf zoneOptions; default = {}; @@ -785,7 +883,6 @@ in serverGroup1. ''; }; - }; config = mkIf cfg.enable { @@ -832,9 +929,9 @@ in mkdir -m 0700 -p "${stateDir}/var" cat > "${stateDir}/don't touch anything in here" << EOF - Everything in this directory except NSD's state in var is - automatically generated and will be purged and redeployed - by the nsd.service pre-start script. + Everything in this directory except NSD's state in var and dnssec + is automatically generated and will be purged and redeployed by + the nsd.service pre-start script. EOF chown ${username}:${username} -R "${stateDir}/private" @@ -848,6 +945,34 @@ in ''; }; + nixpkgs.config = mkIf dnssec { + bind.enablePython = true; + }; + + systemd.timers."nsd-dnssec" = mkIf dnssec { + description = "Automatic DNSSEC key rollover"; + + wantedBy = [ "nsd.service" ]; + + timerConfig = { + OnActiveSec = cfg.dnssecInterval; + OnUnitActiveSec = cfg.dnssecInterval; + }; + }; + + systemd.services."nsd-dnssec" = mkIf dnssec { + description = "DNSSEC key rollover"; + + wantedBy = [ "nsd.service" ]; + before = [ "nsd.service" ]; + + script = signZones; + + postStop = '' + ${pkgs.systemd}/bin/systemctl kill -s SIGHUP nsd.service + ''; + }; + }; meta.maintainers = with lib.maintainers; [ hrdinka ]; diff --git a/nixos/modules/services/networking/openvpn.nix b/nixos/modules/services/networking/openvpn.nix index 7a96b673c51e..a418839d22b8 100644 --- a/nixos/modules/services/networking/openvpn.nix +++ b/nixos/modules/services/networking/openvpn.nix @@ -65,7 +65,7 @@ let path = [ pkgs.iptables pkgs.iproute pkgs.nettools ]; - serviceConfig.ExecStart = "@${openvpn}/sbin/openvpn openvpn --config ${configFile}"; + serviceConfig.ExecStart = "@${openvpn}/sbin/openvpn openvpn --suppress-timestamps --config ${configFile}"; serviceConfig.Restart = "always"; serviceConfig.Type = "notify"; }; diff --git a/nixos/modules/services/networking/prosody.nix b/nixos/modules/services/networking/prosody.nix index f409962816dc..1b4f81f6b56e 100644 --- a/nixos/modules/services/networking/prosody.nix +++ b/nixos/modules/services/networking/prosody.nix @@ -301,6 +301,18 @@ in default = "/var/lib/prosody"; }; + user = mkOption { + type = types.str; + default = "prosody"; + description = "User account under which prosody runs."; + }; + + group = mkOption { + type = types.str; + default = "prosody"; + description = "Group account under which prosody runs."; + }; + allowRegistration = mkOption { type = types.bool; default = false; @@ -427,7 +439,7 @@ in environment.etc."prosody/prosody.cfg.lua".text = '' - pidfile = "${cfg.dataDir}/prosody.pid" + pidfile = "/run/prosody/prosody.pid" log = "*syslog" @@ -475,15 +487,15 @@ in '') cfg.virtualHosts) } ''; - users.extraUsers.prosody = { + users.extraUsers.prosody = mkIf (cfg.user == "prosody") { uid = config.ids.uids.prosody; description = "Prosody user"; createHome = true; - group = "prosody"; + inherit (cfg) group; home = "${cfg.dataDir}"; }; - users.extraGroups.prosody = { + users.extraGroups.prosody = mkIf (cfg.group == "prosody") { gid = config.ids.gids.prosody; }; @@ -494,9 +506,11 @@ in wantedBy = [ "multi-user.target" ]; restartTriggers = [ config.environment.etc."prosody/prosody.cfg.lua".source ]; serviceConfig = { - User = "prosody"; + User = cfg.user; + Group = cfg.group; Type = "forking"; - PIDFile = "${cfg.dataDir}/prosody.pid"; + RuntimeDirectory = [ "prosody" ]; + PIDFile = "/run/prosody/prosody.pid"; ExecStart = "${cfg.package}/bin/prosodyctl start"; }; }; diff --git a/nixos/modules/services/networking/quagga.nix b/nixos/modules/services/networking/quagga.nix index aab58cc77b90..22204e53203c 100644 --- a/nixos/modules/services/networking/quagga.nix +++ b/nixos/modules/services/networking/quagga.nix @@ -133,7 +133,7 @@ in users.groups = { quagga = {}; # Members of the quaggavty group can use vtysh to inspect the Quagga daemons - quaggavty = {}; + quaggavty = { members = [ "quagga" ]; }; }; systemd.services = diff --git a/nixos/modules/services/networking/shadowsocks.nix b/nixos/modules/services/networking/shadowsocks.nix new file mode 100644 index 000000000000..fe6d65a5f963 --- /dev/null +++ b/nixos/modules/services/networking/shadowsocks.nix @@ -0,0 +1,112 @@ +{ config, lib, pkgs, ... }: + +with lib; + +let + cfg = config.services.shadowsocks; + + opts = { + server = cfg.localAddress; + server_port = cfg.port; + method = cfg.encryptionMethod; + mode = cfg.mode; + user = "nobody"; + fast_open = true; + } // optionalAttrs (cfg.password != null) { password = cfg.password; }; + + configFile = pkgs.writeText "shadowsocks.json" (builtins.toJSON opts); + +in + +{ + + ###### interface + + options = { + + services.shadowsocks = { + + enable = mkOption { + type = types.bool; + default = false; + description = '' + Whether to run shadowsocks-libev shadowsocks server. + ''; + }; + + localAddress = mkOption { + type = types.str; + default = "0.0.0.0"; + description = '' + Local address to which the server binds. + ''; + }; + + port = mkOption { + type = types.int; + default = 8388; + description = '' + Port which the server uses. + ''; + }; + + password = mkOption { + type = types.nullOr types.str; + default = null; + description = '' + Password for connecting clients. + ''; + }; + + passwordFile = mkOption { + type = types.nullOr types.path; + default = null; + description = '' + Password file with a password for connecting clients. + ''; + }; + + mode = mkOption { + type = types.enum [ "tcp_only" "tcp_and_udp" "udp_only" ]; + default = "tcp_and_udp"; + description = '' + Relay protocols. + ''; + }; + + encryptionMethod = mkOption { + type = types.str; + default = "chacha20-ietf-poly1305"; + description = '' + Encryption method. See <link xlink:href="https://github.com/shadowsocks/shadowsocks-org/wiki/AEAD-Ciphers"/>. + ''; + }; + + }; + + }; + + + ###### implementation + + config = mkIf cfg.enable { + assertions = singleton + { assertion = cfg.password == null || cfg.passwordFile == null; + message = "Cannot use both password and passwordFile for shadowsocks-libev"; + }; + + systemd.services.shadowsocks-libev = { + description = "shadowsocks-libev Daemon"; + after = [ "network.target" ]; + wantedBy = [ "multi-user.target" ]; + path = [ pkgs.shadowsocks-libev ] ++ optional (cfg.passwordFile != null) pkgs.jq; + serviceConfig.PrivateTmp = true; + script = '' + ${optionalString (cfg.passwordFile != null) '' + cat ${configFile} | jq --arg password "$(cat "${cfg.passwordFile}")" '. + { password: $password }' > /tmp/shadowsocks.json + ''} + exec ss-server -c ${if cfg.passwordFile != null then "/tmp/shadowsocks.json" else configFile} + ''; + }; + }; +} diff --git a/nixos/modules/services/networking/ssh/sshd.nix b/nixos/modules/services/networking/ssh/sshd.nix index e50c4dbacf36..aab1203086ce 100644 --- a/nixos/modules/services/networking/ssh/sshd.nix +++ b/nixos/modules/services/networking/ssh/sshd.nix @@ -213,6 +213,65 @@ in description = "Files from which authorized keys are read."; }; + kexAlgorithms = mkOption { + type = types.listOf types.str; + default = [ + "curve25519-sha256@libssh.org" + "diffie-hellman-group-exchange-sha256" + ]; + description = '' + Allowed key exchange algorithms + </para> + <para> + Defaults to recommended settings from both + <link xlink:href="https://stribika.github.io/2015/01/04/secure-secure-shell.html" /> + and + <link xlink:href="https://wiki.mozilla.org/Security/Guidelines/OpenSSH#Modern_.28OpenSSH_6.7.2B.29" /> + ''; + }; + + ciphers = mkOption { + type = types.listOf types.str; + default = [ + "chacha20-poly1305@openssh.com" + "aes256-gcm@openssh.com" + "aes128-gcm@openssh.com" + "aes256-ctr" + "aes192-ctr" + "aes128-ctr" + ]; + description = '' + Allowed ciphers + </para> + <para> + Defaults to recommended settings from both + <link xlink:href="https://stribika.github.io/2015/01/04/secure-secure-shell.html" /> + and + <link xlink:href="https://wiki.mozilla.org/Security/Guidelines/OpenSSH#Modern_.28OpenSSH_6.7.2B.29" /> + ''; + }; + + macs = mkOption { + type = types.listOf types.str; + default = [ + "hmac-sha2-512-etm@openssh.com" + "hmac-sha2-256-etm@openssh.com" + "umac-128-etm@openssh.com" + "hmac-sha2-512" + "hmac-sha2-256" + "umac-128@openssh.com" + ]; + description = '' + Allowed MACs + </para> + <para> + Defaults to recommended settings from both + <link xlink:href="https://stribika.github.io/2015/01/04/secure-secure-shell.html" /> + and + <link xlink:href="https://wiki.mozilla.org/Security/Guidelines/OpenSSH#Modern_.28OpenSSH_6.7.2B.29" /> + ''; + }; + extraConfig = mkOption { type = types.lines; default = ""; @@ -363,14 +422,9 @@ in HostKey ${k.path} '')} - ### Recommended settings from both: - # https://stribika.github.io/2015/01/04/secure-secure-shell.html - # and - # https://wiki.mozilla.org/Security/Guidelines/OpenSSH#Modern_.28OpenSSH_6.7.2B.29 - - KexAlgorithms curve25519-sha256@libssh.org,diffie-hellman-group-exchange-sha256 - Ciphers chacha20-poly1305@openssh.com,aes256-gcm@openssh.com,aes128-gcm@openssh.com,aes256-ctr,aes192-ctr,aes128-ctr - MACs hmac-sha2-512-etm@openssh.com,hmac-sha2-256-etm@openssh.com,umac-128-etm@openssh.com,hmac-sha2-512,hmac-sha2-256,umac-128@openssh.com + KexAlgorithms ${concatStringsSep "," cfg.kexAlgorithms} + Ciphers ${concatStringsSep "," cfg.ciphers} + MACs ${concatStringsSep "," cfg.macs} # LogLevel VERBOSE logs user's key fingerprint on login. # Needed to have a clear audit track of which key was used to log in. diff --git a/nixos/modules/services/networking/strongswan-swanctl/module.nix b/nixos/modules/services/networking/strongswan-swanctl/module.nix new file mode 100644 index 000000000000..d770094960b2 --- /dev/null +++ b/nixos/modules/services/networking/strongswan-swanctl/module.nix @@ -0,0 +1,82 @@ +{ config, lib, pkgs, ... }: + +with lib; +with (import ./param-lib.nix lib); + +let + cfg = config.services.strongswan-swanctl; + swanctlParams = import ./swanctl-params.nix lib; +in { + options.services.strongswan-swanctl = { + enable = mkEnableOption "strongswan-swanctl service"; + + package = mkOption { + type = types.package; + default = pkgs.strongswan; + defaultText = "pkgs.strongswan"; + description = '' + The strongswan derivation to use. + ''; + }; + + strongswan.extraConfig = mkOption { + type = types.str; + default = ""; + description = '' + Contents of the <literal>strongswan.conf</literal> file. + ''; + }; + + swanctl = paramsToOptions swanctlParams; + }; + + config = mkIf cfg.enable { + + assertions = [ + { assertion = !config.services.strongswan.enable; + message = "cannot enable both services.strongswan and services.strongswan-swanctl. Choose either one."; + } + ]; + + environment.etc."swanctl/swanctl.conf".text = + paramsToConf cfg.swanctl swanctlParams; + + # The swanctl command complains when the following directories don't exist: + # See: https://wiki.strongswan.org/projects/strongswan/wiki/Swanctldirectory + system.activationScripts.strongswan-swanctl-etc = stringAfter ["etc"] '' + mkdir -p '/etc/swanctl/x509' # Trusted X.509 end entity certificates + mkdir -p '/etc/swanctl/x509ca' # Trusted X.509 Certificate Authority certificates + mkdir -p '/etc/swanctl/x509ocsp' + mkdir -p '/etc/swanctl/x509aa' # Trusted X.509 Attribute Authority certificates + mkdir -p '/etc/swanctl/x509ac' # Attribute Certificates + mkdir -p '/etc/swanctl/x509crl' # Certificate Revocation Lists + mkdir -p '/etc/swanctl/pubkey' # Raw public keys + mkdir -p '/etc/swanctl/private' # Private keys in any format + mkdir -p '/etc/swanctl/rsa' # PKCS#1 encoded RSA private keys + mkdir -p '/etc/swanctl/ecdsa' # Plain ECDSA private keys + mkdir -p '/etc/swanctl/bliss' + mkdir -p '/etc/swanctl/pkcs8' # PKCS#8 encoded private keys of any type + mkdir -p '/etc/swanctl/pkcs12' # PKCS#12 containers + ''; + + systemd.services.strongswan-swanctl = { + description = "strongSwan IPsec IKEv1/IKEv2 daemon using swanctl"; + wantedBy = [ "multi-user.target" ]; + after = [ "network-online.target" "keys.target" ]; + wants = [ "keys.target" ]; + path = with pkgs; [ kmod iproute iptables utillinux ]; + environment.STRONGSWAN_CONF = pkgs.writeTextFile { + name = "strongswan.conf"; + text = cfg.strongswan.extraConfig; + }; + restartTriggers = [ config.environment.etc."swanctl/swanctl.conf".source ]; + serviceConfig = { + ExecStart = "${cfg.package}/sbin/charon-systemd"; + Type = "notify"; + ExecStartPost = "${cfg.package}/sbin/swanctl --load-all --noprompt"; + ExecReload = "${cfg.package}/sbin/swanctl --reload"; + Restart = "on-abnormal"; + }; + }; + }; +} diff --git a/nixos/modules/services/networking/strongswan-swanctl/param-constructors.nix b/nixos/modules/services/networking/strongswan-swanctl/param-constructors.nix new file mode 100644 index 000000000000..5e74a96664f0 --- /dev/null +++ b/nixos/modules/services/networking/strongswan-swanctl/param-constructors.nix @@ -0,0 +1,162 @@ +# In the following context a parameter is an attribute set that +# contains a NixOS option and a render function. It also contains the +# attribute: '_type = "param"' so we can distinguish it from other +# sets. +# +# The render function is used to convert the value of the option to a +# snippet of strongswan.conf. Most parameters simply render their +# value to a string. For example, take the following parameter: +# +# threads = mkIntParam 10 "Threads to use for request handling."; +# +# When a users defines the corresponding option as for example: +# +# services.strongswan-swanctl.strongswan.threads = 32; +# +# It will get rendered to the following snippet in strongswan.conf: +# +# threads = 32 +# +# Some parameters however need to be able to change the attribute +# name. For example, take the following parameter: +# +# id = mkPrefixedAttrsOfParam (mkOptionalStrParam "") "..."; +# +# A user can define the corresponding option as for example: +# +# id = { +# "foo" = "bar"; +# "baz" = "qux"; +# }; +# +# This will get rendered to the following snippet: +# +# foo-id = bar +# baz-id = qux +# +# For this reason the render function is not simply a function from +# value -> string but a function from a value to an attribute set: +# { "${name}" = string }. This allows parameters to change the attribute +# name like in the previous example. + +lib : + +with lib; +with (import ./param-lib.nix lib); + +rec { + mkParamOfType = type : strongswanDefault : description : { + _type = "param"; + option = mkOption { + type = types.nullOr type; + default = null; + description = documentDefault description strongswanDefault; + }; + render = single toString; + }; + + documentDefault = description : strongswanDefault : + if isNull strongswanDefault + then description + else description + '' + </para><para> + StrongSwan default: <literal><![CDATA[${builtins.toJSON strongswanDefault}]]></literal> + ''; + + single = f: name: value: { "${name}" = f value; }; + + mkStrParam = mkParamOfType types.str; + mkOptionalStrParam = mkStrParam null; + + mkEnumParam = values : mkParamOfType (types.enum values); + + mkIntParam = mkParamOfType types.int; + mkOptionalIntParam = mkIntParam null; + + # We should have floats in Nix... + mkFloatParam = mkStrParam; + + # TODO: Check for hex format: + mkHexParam = mkStrParam; + mkOptionalHexParam = mkOptionalStrParam; + + # TODO: Check for duration format: + mkDurationParam = mkStrParam; + mkOptionalDurationParam = mkOptionalStrParam; + + mkYesNoParam = strongswanDefault : description : { + _type = "param"; + option = mkOption { + type = types.nullOr types.bool; + default = null; + description = documentDefault description strongswanDefault; + }; + render = single (b: if b then "yes" else "no"); + }; + yes = true; + no = false; + + mkSpaceSepListParam = mkSepListParam " "; + mkCommaSepListParam = mkSepListParam ","; + + mkSepListParam = sep : strongswanDefault : description : { + _type = "param"; + option = mkOption { + type = types.nullOr (types.listOf types.str); + default = null; + description = documentDefault description strongswanDefault; + }; + render = single (value: concatStringsSep sep value); + }; + + mkAttrsOfParams = params : + mkAttrsOf params (types.submodule {options = paramsToOptions params;}); + + mkAttrsOfParam = param : + mkAttrsOf param param.option.type; + + mkAttrsOf = param : option : description : { + _type = "param"; + option = mkOption { + type = types.attrsOf option; + default = {}; + inherit description; + }; + render = single (attrs: + (paramsToRenderedStrings attrs + (mapAttrs (_n: _v: param) attrs))); + }; + + mkPrefixedAttrsOfParams = params : + mkPrefixedAttrsOf params (types.submodule {options = paramsToOptions params;}); + + mkPrefixedAttrsOfParam = param : + mkPrefixedAttrsOf param param.option.type; + + mkPrefixedAttrsOf = p : option : description : { + _type = "param"; + option = mkOption { + type = types.attrsOf option; + default = {}; + inherit description; + }; + render = prefix: attrs: + let prefixedAttrs = mapAttrs' (name: nameValuePair "${prefix}-${name}") attrs; + in paramsToRenderedStrings prefixedAttrs + (mapAttrs (_n: _v: p) prefixedAttrs); + }; + + mkPostfixedAttrsOfParams = params : description : { + _type = "param"; + option = mkOption { + type = types.attrsOf (types.submodule {options = paramsToOptions params;}); + default = {}; + inherit description; + }; + render = postfix: attrs: + let postfixedAttrs = mapAttrs' (name: nameValuePair "${name}-${postfix}") attrs; + in paramsToRenderedStrings postfixedAttrs + (mapAttrs (_n: _v: params) postfixedAttrs); + }; + +} diff --git a/nixos/modules/services/networking/strongswan-swanctl/param-lib.nix b/nixos/modules/services/networking/strongswan-swanctl/param-lib.nix new file mode 100644 index 000000000000..fb87e81f3215 --- /dev/null +++ b/nixos/modules/services/networking/strongswan-swanctl/param-lib.nix @@ -0,0 +1,82 @@ +lib : + +with lib; + +rec { + paramsToConf = cfg : ps : mkConf 0 (paramsToRenderedStrings cfg ps); + + # mkConf takes an indentation level (which usually starts at 0) and a nested + # attribute set of strings and will render that set to a strongswan.conf style + # configuration format. For example: + # + # mkConf 0 {a = "1"; b = { c = { "foo" = "2"; "bar" = "3"; }; d = "4";};} => '' + # a = 1 + # b { + # c { + # foo = 2 + # bar = 3 + # } + # d = 4 + # }'' + mkConf = indent : ps : + concatMapStringsSep "\n" + (name: + let value = ps."${name}"; + indentation = replicate indent " "; + in + indentation + ( + if isAttrs value + then "${name} {\n" + + mkConf (indent + 2) value + "\n" + + indentation + "}" + else "${name} = ${value}" + ) + ) + (attrNames ps); + + replicate = n : c : concatStrings (builtins.genList (_x : c) n); + + # `paramsToRenderedStrings cfg ps` converts the NixOS configuration `cfg` + # (typically the "config" argument of a NixOS module) and the set of + # parameters `ps` (an attribute set where the values are constructed using the + # parameter constructors in ./param-constructors.nix) to a nested attribute + # set of strings (rendered parameters). + paramsToRenderedStrings = cfg : ps : + filterEmptySets ( + (mapParamsRecursive (path: name: param: + let value = attrByPath path null cfg; + in optionalAttrs (!isNull value) (param.render name value) + ) ps)); + + filterEmptySets = set : filterAttrs (n: v: !(isNull v)) (mapAttrs (name: value: + if isAttrs value + then let value' = filterEmptySets value; + in if value' == {} + then null + else value' + else value + ) set); + + # Recursively map over every parameter in the given attribute set. + mapParamsRecursive = mapAttrsRecursiveCond' (as: (!(as ? "_type" && as._type == "param"))); + + mapAttrsRecursiveCond' = cond: f: set: + let + recurse = path: set: + let + g = + name: value: + if isAttrs value && cond value + then { "${name}" = recurse (path ++ [name]) value; } + else f (path ++ [name]) name value; + in mapAttrs'' g set; + in recurse [] set; + + mapAttrs'' = f: set: + foldl' (a: b: a // b) {} (map (attr: f attr set.${attr}) (attrNames set)); + + # Extract the options from the given set of parameters. + paramsToOptions = ps : + mapParamsRecursive (_path: name: param: { "${name}" = param.option; }) ps; + +} diff --git a/nixos/modules/services/networking/strongswan-swanctl/swanctl-params.nix b/nixos/modules/services/networking/strongswan-swanctl/swanctl-params.nix new file mode 100644 index 000000000000..ad211f41eef0 --- /dev/null +++ b/nixos/modules/services/networking/strongswan-swanctl/swanctl-params.nix @@ -0,0 +1,1168 @@ +# See: https://wiki.strongswan.org/projects/strongswan/wiki/Swanctlconf +# +# When strongSwan is upgraded please update the parameters in this file. You can +# see which parameters should be deleted, changed or added by diffing +# swanctl.opt: +# +# git clone https://github.com/strongswan/strongswan.git +# cd strongswan +# git diff 5.5.3..5.6.0 src/swanctl/swanctl.opt + +lib: with (import ./param-constructors.nix lib); + +let + certParams = { + file = mkOptionalStrParam '' + Absolute path to the certificate to load. Passed as-is to the daemon, so + it must be readable by it. + </para><para> + Configure either this or <option>handle</option>, but not both, in one section. + ''; + + handle = mkOptionalHexParam '' + Hex-encoded CKA_ID or handle of the certificate on a token or TPM, + respectively. + </para><para> + Configure either this or <option>file</option>, but not both, in one section. + ''; + + slot = mkOptionalIntParam '' + Optional slot number of the token that stores the certificate. + ''; + + module = mkOptionalStrParam '' + Optional PKCS#11 module name. + ''; + }; +in { + authorities = mkAttrsOfParams ({ + + cacert = mkOptionalStrParam '' + The certificates may use a relative path from the swanctl + <literal>x509ca</literal> directory or an absolute path. + </para><para> + Configure one of <option>cacert</option>, + <option>file</option>, or + <option>handle</option> per section. + ''; + + cert_uri_base = mkOptionalStrParam '' + Defines the base URI for the Hash and URL feature supported by + IKEv2. Instead of exchanging complete certificates, IKEv2 allows one to + send an URI that resolves to the DER encoded certificate. The certificate + URIs are built by appending the SHA1 hash of the DER encoded certificates + to this base URI. + ''; + + crl_uris = mkCommaSepListParam [] '' + List of CRL distribution points (ldap, http, or file URI). + ''; + + ocsp_uris = mkCommaSepListParam [] '' + List of OCSP URIs. + ''; + + } // certParams) '' + Section defining complementary attributes of certification authorities, each + in its own subsection with an arbitrary yet unique name + ''; + + connections = mkAttrsOfParams { + + version = mkIntParam 0 '' + IKE major version to use for connection. + <itemizedlist> + <listitem><para>1 uses IKEv1 aka ISAKMP,</para></listitem> + <listitem><para>2 uses IKEv2.</para></listitem> + <listitem><para>A connection using the default of 0 accepts both IKEv1 and IKEv2 as + responder, and initiates the connection actively with IKEv2.</para></listitem> + </itemizedlist> + ''; + + local_addrs = mkCommaSepListParam [] '' + Local address(es) to use for IKE communication. Takes + single IPv4/IPv6 addresses, DNS names, CIDR subnets or IP address ranges. + </para><para> + As initiator, the first non-range/non-subnet is used to initiate the + connection from. As responder, the local destination address must match at + least to one of the specified addresses, subnets or ranges. + </para><para> + If FQDNs are assigned they are resolved every time a configuration lookup + is done. If DNS resolution times out, the lookup is delayed for that time. + ''; + + remote_addrs = mkCommaSepListParam [] '' + Remote address(es) to use for IKE communication. Takes + single IPv4/IPv6 addresses, DNS names, CIDR subnets or IP address ranges. + </para><para> + As initiator, the first non-range/non-subnet is used to initiate the + connection to. As responder, the initiator source address must match at + least to one of the specified addresses, subnets or ranges. + </para><para> + If FQDNs are assigned they are resolved every time a configuration lookup + is done. If DNS resolution times out, the lookup is delayed for that time. + To initiate a connection, at least one specific address or DNS name must + be specified. + ''; + + local_port = mkIntParam 500 '' + Local UDP port for IKE communication. By default the port of the socket + backend is used, which is usually <literal>500</literal>. If port + <literal>500</literal> is used, automatic IKE port floating to port + <literal>4500</literal> is used to work around NAT issues. + </para><para> + Using a non-default local IKE port requires support from the socket + backend in use (socket-dynamic). + ''; + + remote_port = mkIntParam 500 '' + Remote UDP port for IKE communication. If the default of port + <literal>500</literal> is used, automatic IKE port floating to port + <literal>4500</literal> is used to work around NAT issues. + ''; + + proposals = mkCommaSepListParam ["default"] '' + A proposal is a set of algorithms. For non-AEAD algorithms, this includes + for IKE an encryption algorithm, an integrity algorithm, a pseudo random + function and a Diffie-Hellman group. For AEAD algorithms, instead of + encryption and integrity algorithms, a combined algorithm is used. + </para><para> + In IKEv2, multiple algorithms of the same kind can be specified in a + single proposal, from which one gets selected. In IKEv1, only one + algorithm per kind is allowed per proposal, more algorithms get implicitly + stripped. Use multiple proposals to offer different algorithms + combinations in IKEv1. + </para><para> + Algorithm keywords get separated using dashes. Multiple proposals may be + specified in a list. The special value <literal>default</literal> forms a + default proposal of supported algorithms considered safe, and is usually a + good choice for interoperability. + ''; + + vips = mkCommaSepListParam [] '' + List of virtual IPs to request in IKEv2 configuration payloads or IKEv1 + Mode Config. The wildcard addresses <literal>0.0.0.0</literal> and + <literal>::</literal> request an arbitrary address, specific addresses may + be defined. The responder may return a different address, though, or none + at all. + ''; + + aggressive = mkYesNoParam no '' + Enables Aggressive Mode instead of Main Mode with Identity + Protection. Aggressive Mode is considered less secure, because the ID and + HASH payloads are exchanged unprotected. This allows a passive attacker to + snoop peer identities, and even worse, start dictionary attacks on the + Preshared Key. + ''; + + pull = mkYesNoParam yes '' + If the default of yes is used, Mode Config works in pull mode, where the + initiator actively requests a virtual IP. With no, push mode is used, + where the responder pushes down a virtual IP to the initiating peer. + </para><para> + Push mode is currently supported for IKEv1, but not in IKEv2. It is used + by a few implementations only, pull mode is recommended. + ''; + + dscp = mkStrParam "000000" '' + Differentiated Services Field Codepoint to set on outgoing IKE packets for + this connection. The value is a six digit binary encoded string specifying + the Codepoint to set, as defined in RFC 2474. + ''; + + encap = mkYesNoParam no '' + To enforce UDP encapsulation of ESP packets, the IKE daemon can fake the + NAT detection payloads. This makes the peer believe that NAT takes place + on the path, forcing it to encapsulate ESP packets in UDP. + </para><para> + Usually this is not required, but it can help to work around connectivity + issues with too restrictive intermediary firewalls. + ''; + + mobike = mkYesNoParam yes '' + Enables MOBIKE on IKEv2 connections. MOBIKE is enabled by default on IKEv2 + connections, and allows mobility of clients and multi-homing on servers by + migrating active IPsec tunnels. + </para><para> + Usually keeping MOBIKE enabled is unproblematic, as it is not used if the + peer does not indicate support for it. However, due to the design of + MOBIKE, IKEv2 always floats to port 4500 starting from the second + exchange. Some implementations don't like this behavior, hence it can be + disabled. + ''; + + dpd_delay = mkDurationParam "0s" '' + Interval to check the liveness of a peer actively using IKEv2 + INFORMATIONAL exchanges or IKEv1 R_U_THERE messages. Active DPD checking + is only enforced if no IKE or ESP/AH packet has been received for the + configured DPD delay. + ''; + + dpd_timeout = mkDurationParam "0s" '' + Charon by default uses the normal retransmission mechanism and timeouts to + check the liveness of a peer, as all messages are used for liveness + checking. For compatibility reasons, with IKEv1 a custom interval may be + specified; this option has no effect on connections using IKEv2. + ''; + + fragmentation = mkEnumParam ["yes" "accept" "force" "no"] "yes" '' + Use IKE fragmentation (proprietary IKEv1 extension or RFC 7383 IKEv2 + fragmentation). Acceptable values are <literal>yes</literal> (the default + since 5.5.1), <literal>accept</literal> (since versions:5.5.3), + <literal>force</literal> and <literal>no</literal>. + <itemizedlist> + <listitem><para>If set to <literal>yes</literal>, and the peer + supports it, oversized IKE messages will be sent in fragments.</para></listitem> + <listitem><para>If set to + <literal>accept</literal>, support for fragmentation is announced to the peer but the daemon + does not send its own messages in fragments.</para></listitem> + <listitem><para>If set to <literal>force</literal> (only + supported for IKEv1) the initial IKE message will already be fragmented if + required.</para></listitem> + <listitem><para>Finally, setting the option to <literal>no</literal> will disable announcing + support for this feature.</para></listitem> + </itemizedlist> + </para><para> + Note that fragmented IKE messages sent by a peer are always processed + irrespective of the value of this option (even when set to no). + ''; + + send_certreq = mkYesNoParam yes '' + Send certificate request payloads to offer trusted root CA certificates to + the peer. Certificate requests help the peer to choose an appropriate + certificate/private key for authentication and are enabled by default. + Disabling certificate requests can be useful if too many trusted root CA + certificates are installed, as each certificate request increases the size + of the initial IKE packets. + ''; + + send_cert = mkEnumParam ["always" "never" "ifasked" ] "ifasked" '' + Send certificate payloads when using certificate authentication. + <itemizedlist> + <listitem><para>With the default of <literal>ifasked</literal> the daemon sends + certificate payloads only if certificate requests have been received.</para></listitem> + <listitem><para><literal>never</literal> disables sending of certificate payloads + altogether,</para></listitem> + <listitem><para><literal>always</literal> causes certificate payloads to be sent + unconditionally whenever certificate authentication is used.</para></listitem> + </itemizedlist> + ''; + + keyingtries = mkIntParam 1 '' + Number of retransmission sequences to perform during initial + connect. Instead of giving up initiation after the first retransmission + sequence with the default value of <literal>1</literal>, additional + sequences may be started according to the configured value. A value of + <literal>0</literal> initiates a new sequence until the connection + establishes or fails with a permanent error. + ''; + + unique = mkEnumParam ["no" "never" "keep" "replace"] "no" '' + Connection uniqueness policy to enforce. To avoid multiple connections + from the same user, a uniqueness policy can be enforced. + </para><para> + <itemizedlist> + <listitem><para> + The value <literal>never</literal> does never enforce such a policy, even + if a peer included INITIAL_CONTACT notification messages, + </para></listitem> + <listitem><para> + whereas <literal>no</literal> replaces existing connections for the same + identity if a new one has the INITIAL_CONTACT notify. + </para></listitem> + <listitem><para> + <literal>keep</literal> rejects new connection attempts if the same user + already has an active connection, + </para></listitem> + <listitem><para> + <literal>replace</literal> deletes any existing connection if a new one + for the same user gets established. + </para></listitem> + </itemizedlist> + To compare connections for uniqueness, the remote IKE identity is used. If + EAP or XAuth authentication is involved, the EAP-Identity or XAuth + username is used to enforce the uniqueness policy instead. + </para><para> + On initiators this setting specifies whether an INITIAL_CONTACT notify is + sent during IKE_AUTH if no existing connection is found with the remote + peer (determined by the identities of the first authentication + round). Unless set to <literal>never</literal> the client will send a notify. + ''; + + reauth_time = mkDurationParam "0s" '' + Time to schedule IKE reauthentication. IKE reauthentication recreates the + IKE/ISAKMP SA from scratch and re-evaluates the credentials. In asymmetric + configurations (with EAP or configuration payloads) it might not be + possible to actively reauthenticate as responder. The IKEv2 + reauthentication lifetime negotiation can instruct the client to perform + reauthentication. + </para><para> + Reauthentication is disabled by default. Enabling it usually may lead to + small connection interruptions, as strongSwan uses a break-before-make + policy with IKEv2 to avoid any conflicts with associated tunnel resources. + ''; + + rekey_time = mkDurationParam "4h" '' + IKE rekeying refreshes key material using a Diffie-Hellman exchange, but + does not re-check associated credentials. It is supported in IKEv2 only, + IKEv1 performs a reauthentication procedure instead. + </para><para> + With the default value IKE rekeying is scheduled every 4 hours, minus the + configured rand_time. If a reauth_time is configured, rekey_time defaults + to zero, disabling rekeying; explicitly set both to enforce rekeying and + reauthentication. + ''; + + over_time = mkOptionalDurationParam '' + Hard IKE_SA lifetime if rekey/reauth does not complete, as time. To avoid + having an IKE/ISAKMP kept alive if IKE reauthentication or rekeying fails + perpetually, a maximum hard lifetime may be specified. If the IKE_SA fails + to rekey or reauthenticate within the specified time, the IKE_SA gets + closed. + </para><para> + In contrast to CHILD_SA rekeying, over_time is relative in time to the + rekey_time and reauth_time values, as it applies to both. + </para><para> + The default is 10% of the longer of <option>rekey_time</option> and + <option>reauth_time</option>. + ''; + + rand_time = mkOptionalDurationParam '' + Time range from which to choose a random value to subtract from + rekey/reauth times. To avoid having both peers initiating the rekey/reauth + procedure simultaneously, a random time gets subtracted from the + rekey/reauth times. + </para><para> + The default is equal to the configured <option>over_time</option>. + ''; + + pools = mkCommaSepListParam [] '' + List of named IP pools to allocate virtual IP addresses + and other configuration attributes from. Each name references a pool by + name from either the pools section or an external pool. + ''; + + mediation = mkYesNoParam no '' + Whether this connection is a mediation connection, that is, whether this + connection is used to mediate other connections using the IKEv2 Mediation + Extension. Mediation connections create no CHILD_SA. + ''; + + mediated_by = mkOptionalStrParam '' + The name of the connection to mediate this connection through. If given, + the connection will be mediated through the named mediation + connection. The mediation connection must have mediation enabled. + ''; + + mediation_peer = mkOptionalStrParam '' + Identity under which the peer is registered at the mediation server, that + is, the IKE identity the other end of this connection uses as its local + identity on its connection to the mediation server. This is the identity + we request the mediation server to mediate us with. Only relevant on + connections that set mediated_by. If it is not given, the remote IKE + identity of the first authentication round of this connection will be + used. + ''; + + local = mkPrefixedAttrsOfParams { + + round = mkIntParam 0 '' + Optional numeric identifier by which authentication rounds are + sorted. If not specified rounds are ordered by their position in the + config file/vici message. + ''; + + certs = mkCommaSepListParam [] '' + List of certificate candidates to use for + authentication. The certificates may use a relative path from the + swanctl <literal>x509</literal> directory or an absolute path. + </para><para> + The certificate used for authentication is selected based on the + received certificate request payloads. If no appropriate CA can be + located, the first certificate is used. + ''; + + cert = mkPostfixedAttrsOfParams certParams '' + Section for a certificate candidate to use for + authentication. Certificates in certs are transmitted as binary blobs, + these sections offer more flexibility. + ''; + + pubkeys = mkCommaSepListParam [] '' + List of raw public key candidates to use for + authentication. The public keys may use a relative path from the swanctl + <literal>pubkey</literal> directory or an absolute path. + </para><para> + Even though multiple local public keys could be defined in principle, + only the first public key in the list is used for authentication. + ''; + + auth = mkStrParam "pubkey" '' + Authentication to perform locally. + <itemizedlist> + <listitem><para> + The default <literal>pubkey</literal> uses public key authentication + using a private key associated to a usable certificate. + </para></listitem> + <listitem><para> + <literal>psk</literal> uses pre-shared key authentication. + </para></listitem> + <listitem><para> + The IKEv1 specific <literal>xauth</literal> is used for XAuth or Hybrid + authentication, + </para></listitem> + <listitem><para> + while the IKEv2 specific <literal>eap</literal> keyword defines EAP + authentication. + </para></listitem> + <listitem><para> + For <literal>xauth</literal>, a specific backend name may be appended, + separated by a dash. The appropriate <literal>xauth</literal> backend is + selected to perform the XAuth exchange. For traditional XAuth, the + <literal>xauth</literal> method is usually defined in the second + authentication round following an initial <literal>pubkey</literal> (or + <literal>psk</literal>) round. Using <literal>xauth</literal> in the + first round performs Hybrid Mode client authentication. + </para></listitem> + <listitem><para> + For <literal>eap</literal>, a specific EAP method name may be appended, separated by a + dash. An EAP module implementing the appropriate method is selected to + perform the EAP conversation. + </para></listitem> + <listitem><para> + Since 5.4.0, if both peers support RFC 7427 ("Signature Authentication + in IKEv2") specific hash algorithms to be used during IKEv2 + authentication may be configured. To do so use <literal>ike:</literal> + followed by a trust chain signature scheme constraint (see description + of the <option>remote</option> section's <option>auth</option> + keyword). For example, with <literal>ike:pubkey-sha384-sha256</literal> + a public key signature scheme with either SHA-384 or SHA-256 would get + used for authentication, in that order and depending on the hash + algorithms supported by the peer. If no specific hash algorithms are + configured, the default is to prefer an algorithm that matches or + exceeds the strength of the signature key. If no constraints with + <literal>ike:</literal> prefix are configured any signature scheme + constraint (without <literal>ike:</literal> prefix) will also apply to + IKEv2 authentication, unless this is disabled in + <literal>strongswan.conf</literal>. To use RSASSA-PSS signatures use + <literal>rsa/pss</literal> instead of <literal>pubkey</literal> or + <literal>rsa</literal> as in e.g. + <literal>ike:rsa/pss-sha256</literal>. If <literal>pubkey</literal> or + <literal>rsa</literal> constraints are configured RSASSA-PSS signatures + will only be used if enabled in <literal>strongswan.conf</literal>(5). + </para></listitem> + </itemizedlist> + ''; + + id = mkOptionalStrParam '' + IKE identity to use for authentication round. When using certificate + authentication, the IKE identity must be contained in the certificate, + either as subject or as subjectAltName. + ''; + + eap_id = mkOptionalStrParam '' + Client EAP-Identity to use in EAP-Identity exchange and the EAP method. + ''; + + aaa_id = mkOptionalStrParam '' + Server side EAP-Identity to expect in the EAP method. Some EAP methods, + such as EAP-TLS, use an identity for the server to perform mutual + authentication. This identity may differ from the IKE identity, + especially when EAP authentication is delegated from the IKE responder + to an AAA backend. + </para><para> + For EAP-(T)TLS, this defines the identity for which the server must + provide a certificate in the TLS exchange. + ''; + + xauth_id = mkOptionalStrParam '' + Client XAuth username used in the XAuth exchange. + ''; + + } '' + Section for a local authentication round. A local authentication round + defines the rules how authentication is performed for the local + peer. Multiple rounds may be defined to use IKEv2 RFC 4739 Multiple + Authentication or IKEv1 XAuth. + </para><para> + Each round is defined in a section having <literal>local</literal> as + prefix, and an optional unique suffix. To define a single authentication + round, the suffix may be omitted. + ''; + + remote = mkPrefixedAttrsOfParams { + + round = mkIntParam 0 '' + Optional numeric identifier by which authentication rounds are + sorted. If not specified rounds are ordered by their position in the + config file/vici message. + ''; + + id = mkStrParam "%any" '' + IKE identity to expect for authentication round. When using certificate + authentication, the IKE identity must be contained in the certificate, + either as subject or as subjectAltName. + ''; + + eap_id = mkOptionalStrParam '' + Identity to use as peer identity during EAP authentication. If set to + <literal>%any</literal> the EAP-Identity method will be used to ask the + client for an EAP identity. + ''; + + groups = mkCommaSepListParam [] '' + Authorization group memberships to require. The peer + must prove membership to at least one of the specified groups. Group + membership can be certified by different means, for example by + appropriate Attribute Certificates or by an AAA backend involved in the + authentication. + ''; + + cert_policy = mkCommaSepListParam [] '' + List of certificate policy OIDs the peer's certificate + must have. OIDs are specified using the numerical dotted representation. + ''; + + certs = mkCommaSepListParam [] '' + List of certificates to accept for authentication. The certificates may + use a relative path from the swanctl <literal>x509</literal> directory + or an absolute path. + ''; + + cert = mkPostfixedAttrsOfParams certParams '' + Section for a certificate candidate to use for + authentication. Certificates in certs are transmitted as binary blobs, + these sections offer more flexibility. + ''; + + cacerts = mkCommaSepListParam [] '' + List of CA certificates to accept for + authentication. The certificates may use a relative path from the + swanctl <literal>x509ca</literal> directory or an absolute path. + ''; + + cacert = mkPostfixedAttrsOfParams certParams '' + Section for a CA certificate to accept for authentication. Certificates + in cacerts are transmitted as binary blobs, these sections offer more + flexibility. + ''; + + pubkeys = mkCommaSepListParam [] '' + List of raw public keys to accept for + authentication. The public keys may use a relative path from the swanctl + <literal>pubkey</literal> directory or an absolute path. + ''; + + revocation = mkEnumParam ["strict" "ifuri" "relaxed"] "relaxed" '' + Certificate revocation policy for CRL or OCSP revocation. + <itemizedlist> + <listitem><para> + A <literal>strict</literal> revocation policy fails if no revocation information is + available, i.e. the certificate is not known to be unrevoked. + </para></listitem> + <listitem><para> + <literal>ifuri</literal> fails only if a CRL/OCSP URI is available, but certificate + revocation checking fails, i.e. there should be revocation information + available, but it could not be obtained. + </para></listitem> + <listitem><para> + The default revocation policy <literal>relaxed</literal> fails only if a certificate is + revoked, i.e. it is explicitly known that it is bad. + </para></listitem> + </itemizedlist> + ''; + + auth = mkStrParam "pubkey" '' + Authentication to expect from remote. See the <option>local</option> + section's <option>auth</option> keyword description about the details of + supported mechanisms. + </para><para> + Since 5.4.0, to require a trustchain public key strength for the remote + side, specify the key type followed by the minimum strength in bits (for + example <literal>ecdsa-384</literal> or + <literal>rsa-2048-ecdsa-256</literal>). To limit the acceptable set of + hashing algorithms for trustchain validation, append hash algorithms to + pubkey or a key strength definition (for example + <literal>pubkey-sha256-sha512</literal>, + <literal>rsa-2048-sha256-sha384-sha512</literal> or + <literal>rsa-2048-sha256-ecdsa-256-sha256-sha384</literal>). + Unless disabled in <literal>strongswan.conf</literal>, or explicit IKEv2 + signature constraints are configured (refer to the description of the + <option>local</option> section's <option>auth</option> keyword for + details), such key types and hash algorithms are also applied as + constraints against IKEv2 signature authentication schemes used by the + remote side. To require RSASSA-PSS signatures use + <literal>rsa/pss</literal> instead of <literal>pubkey</literal> or + <literal>rsa</literal> as in e.g. <literal>rsa/pss-sha256</literal>. If + <literal>pubkey</literal> or <literal>rsa</literal> constraints are + configured RSASSA-PSS signatures will only be accepted if enabled in + <literal>strongswan.conf</literal>(5). + </para><para> + To specify trust chain constraints for EAP-(T)TLS, append a colon to the + EAP method, followed by the key type/size and hash algorithm as + discussed above (e.g. <literal>eap-tls:ecdsa-384-sha384</literal>). + ''; + + } '' + Section for a remote authentication round. A remote authentication round + defines the constraints how the peers must authenticate to use this + connection. Multiple rounds may be defined to use IKEv2 RFC 4739 Multiple + Authentication or IKEv1 XAuth. + </para><para> + Each round is defined in a section having <literal>remote</literal> as + prefix, and an optional unique suffix. To define a single authentication + round, the suffix may be omitted. + ''; + + children = mkAttrsOfParams { + ah_proposals = mkCommaSepListParam [] '' + AH proposals to offer for the CHILD_SA. A proposal is a set of + algorithms. For AH, this includes an integrity algorithm and an optional + Diffie-Hellman group. If a DH group is specified, CHILD_SA/Quick Mode + rekeying and initial negotiation uses a separate Diffie-Hellman exchange + using the specified group (refer to esp_proposals for details). + </para><para> + In IKEv2, multiple algorithms of the same kind can be specified in a + single proposal, from which one gets selected. In IKEv1, only one + algorithm per kind is allowed per proposal, more algorithms get + implicitly stripped. Use multiple proposals to offer different algorithms + combinations in IKEv1. + </para><para> + Algorithm keywords get separated using dashes. Multiple proposals may be + specified in a list. The special value <literal>default</literal> forms + a default proposal of supported algorithms considered safe, and is + usually a good choice for interoperability. By default no AH proposals + are included, instead ESP is proposed. + ''; + + esp_proposals = mkCommaSepListParam ["default"] '' + ESP proposals to offer for the CHILD_SA. A proposal is a set of + algorithms. For ESP non-AEAD proposals, this includes an integrity + algorithm, an encryption algorithm, an optional Diffie-Hellman group and + an optional Extended Sequence Number Mode indicator. For AEAD proposals, + a combined mode algorithm is used instead of the separate + encryption/integrity algorithms. + </para><para> + If a DH group is specified, CHILD_SA/Quick Mode rekeying and initial + negotiation use a separate Diffie-Hellman exchange using the specified + group. However, for IKEv2, the keys of the CHILD_SA created implicitly + with the IKE_SA will always be derived from the IKE_SA's key material. So + any DH group specified here will only apply when the CHILD_SA is later + rekeyed or is created with a separate CREATE_CHILD_SA exchange. A + proposal mismatch might, therefore, not immediately be noticed when the + SA is established, but may later cause rekeying to fail. + </para><para> + Extended Sequence Number support may be indicated with the + <literal>esn</literal> and <literal>noesn</literal> values, both may be + included to indicate support for both modes. If omitted, + <literal>noesn</literal> is assumed. + </para><para> + In IKEv2, multiple algorithms of the same kind can be specified in a + single proposal, from which one gets selected. In IKEv1, only one + algorithm per kind is allowed per proposal, more algorithms get + implicitly stripped. Use multiple proposals to offer different algorithms + combinations in IKEv1. + </para><para> + Algorithm keywords get separated using dashes. Multiple proposals may be + specified as a list. The special value <literal>default</literal> forms + a default proposal of supported algorithms considered safe, and is + usually a good choice for interoperability. If no algorithms are + specified for AH nor ESP, the default set of algorithms for ESP is + included. + ''; + + sha256_96 = mkYesNoParam no '' + HMAC-SHA-256 is used with 128-bit truncation with IPsec. For + compatibility with implementations that incorrectly use 96-bit truncation + this option may be enabled to configure the shorter truncation length in + the kernel. This is not negotiated, so this only works with peers that + use the incorrect truncation length (or have this option enabled). + ''; + + local_ts = mkCommaSepListParam ["dynamic"] '' + List of local traffic selectors to include in CHILD_SA. Each selector is + a CIDR subnet definition, followed by an optional proto/port + selector. The special value <literal>dynamic</literal> may be used + instead of a subnet definition, which gets replaced by the tunnel outer + address or the virtual IP, if negotiated. This is the default. + </para><para> + A protocol/port selector is surrounded by opening and closing square + brackets. Between these brackets, a numeric or getservent(3) protocol + name may be specified. After the optional protocol restriction, an + optional port restriction may be specified, separated by a slash. The + port restriction may be numeric, a getservent(3) service name, or the + special value <literal>opaque</literal> for RFC 4301 OPAQUE + selectors. Port ranges may be specified as well, none of the kernel + backends currently support port ranges, though. + </para><para> + When IKEv1 is used only the first selector is interpreted, except if the + Cisco Unity extension plugin is used. This is due to a limitation of the + IKEv1 protocol, which only allows a single pair of selectors per + CHILD_SA. So to tunnel traffic matched by several pairs of selectors when + using IKEv1 several children (CHILD_SAs) have to be defined that cover + the selectors. The IKE daemon uses traffic selector narrowing for IKEv1, + the same way it is standardized and implemented for IKEv2. However, this + may lead to problems with other implementations. To avoid that, configure + identical selectors in such scenarios. + ''; + + remote_ts = mkCommaSepListParam ["dynamic"] '' + List of remote selectors to include in CHILD_SA. See + <option>local_ts</option> for a description of the selector syntax. + ''; + + rekey_time = mkDurationParam "1h" '' + Time to schedule CHILD_SA rekeying. CHILD_SA rekeying refreshes key + material, optionally using a Diffie-Hellman exchange if a group is + specified in the proposal. To avoid rekey collisions initiated by both + ends simultaneously, a value in the range of <option>rand_time</option> + gets subtracted to form the effective soft lifetime. + </para><para> + By default CHILD_SA rekeying is scheduled every hour, minus + <option>rand_time</option>. + ''; + + life_time = mkOptionalDurationParam '' + Maximum lifetime before CHILD_SA gets closed. Usually this hard lifetime + is never reached, because the CHILD_SA gets rekeyed before. If that fails + for whatever reason, this limit closes the CHILD_SA. The default is 10% + more than the <option>rekey_time</option>. + ''; + + rand_time = mkOptionalDurationParam '' + Time range from which to choose a random value to subtract from + <option>rekey_time</option>. The default is the difference between + <option>life_time</option> and <option>rekey_time</option>. + ''; + + rekey_bytes = mkIntParam 0 '' + Number of bytes processed before initiating CHILD_SA rekeying. CHILD_SA + rekeying refreshes key material, optionally using a Diffie-Hellman + exchange if a group is specified in the proposal. + </para><para> + To avoid rekey collisions initiated by both ends simultaneously, a value + in the range of <option>rand_bytes</option> gets subtracted to form the + effective soft volume limit. + </para><para> + Volume based CHILD_SA rekeying is disabled by default. + ''; + + life_bytes = mkOptionalIntParam '' + Maximum bytes processed before CHILD_SA gets closed. Usually this hard + volume limit is never reached, because the CHILD_SA gets rekeyed + before. If that fails for whatever reason, this limit closes the + CHILD_SA. The default is 10% more than <option>rekey_bytes</option>. + ''; + + rand_bytes = mkOptionalIntParam '' + Byte range from which to choose a random value to subtract from + <option>rekey_bytes</option>. The default is the difference between + <option>life_bytes</option> and <option>rekey_bytes</option>. + ''; + + rekey_packets = mkIntParam 0 '' + Number of packets processed before initiating CHILD_SA rekeying. CHILD_SA + rekeying refreshes key material, optionally using a Diffie-Hellman + exchange if a group is specified in the proposal. + </para><para> + To avoid rekey collisions initiated by both ends simultaneously, a value + in the range of <option>rand_packets</option> gets subtracted to form + the effective soft packet count limit. + </para><para> + Packet count based CHILD_SA rekeying is disabled by default. + ''; + + life_packets = mkOptionalIntParam '' + Maximum number of packets processed before CHILD_SA gets closed. Usually + this hard packets limit is never reached, because the CHILD_SA gets + rekeyed before. If that fails for whatever reason, this limit closes the + CHILD_SA. + </para><para> + The default is 10% more than <option>rekey_bytes</option>. + ''; + + rand_packets = mkOptionalIntParam '' + Packet range from which to choose a random value to subtract from + <option>rekey_packets</option>. The default is the difference between + <option>life_packets</option> and <option>rekey_packets</option>. + ''; + + updown = mkOptionalStrParam '' + Updown script to invoke on CHILD_SA up and down events. + ''; + + hostaccess = mkYesNoParam yes '' + Hostaccess variable to pass to <literal>updown</literal> script. + ''; + + mode = mkEnumParam [ "tunnel" + "transport" + "transport_proxy" + "beet" + "pass" + "drop" + ] "tunnel" '' + IPsec Mode to establish CHILD_SA with. + <itemizedlist> + <listitem><para> + <literal>tunnel</literal> negotiates the CHILD_SA in IPsec Tunnel Mode, + </para></listitem> + <listitem><para> + whereas <literal>transport</literal> uses IPsec Transport Mode. + </para></listitem> + <listitem><para> + <literal>transport_proxy</literal> signifying the special Mobile IPv6 + Transport Proxy Mode. + </para></listitem> + <listitem><para> + <literal>beet</literal> is the Bound End to End Tunnel mixture mode, + working with fixed inner addresses without the need to include them in + each packet. + </para></listitem> + <listitem><para> + Both <literal>transport</literal> and <literal>beet</literal> modes are + subject to mode negotiation; <literal>tunnel</literal> mode is + negotiated if the preferred mode is not available. + </para></listitem> + <listitem><para> + <literal>pass</literal> and <literal>drop</literal> are used to install + shunt policies which explicitly bypass the defined traffic from IPsec + processing or drop it, respectively. + </para></listitem> + </itemizedlist> + ''; + + policies = mkYesNoParam yes '' + Whether to install IPsec policies or not. Disabling this can be useful in + some scenarios e.g. MIPv6, where policies are not managed by the IKE + daemon. Since 5.3.3. + ''; + + policies_fwd_out = mkYesNoParam no '' + Whether to install outbound FWD IPsec policies or not. Enabling this is + required in case there is a drop policy that would match and block + forwarded traffic for this CHILD_SA. Since 5.5.1. + ''; + + dpd_action = mkEnumParam ["clear" "trap" "restart"] "clear" '' + Action to perform for this CHILD_SA on DPD timeout. The default clear + closes the CHILD_SA and does not take further action. trap installs a + trap policy, which will catch matching traffic and tries to re-negotiate + the tunnel on-demand. restart immediately tries to re-negotiate the + CHILD_SA under a fresh IKE_SA. + ''; + + ipcomp = mkYesNoParam no '' + Enable IPComp compression before encryption. If enabled, IKE tries to + negotiate IPComp compression to compress ESP payload data prior to + encryption. + ''; + + inactivity = mkDurationParam "0s" '' + Timeout before closing CHILD_SA after inactivity. If no traffic has been + processed in either direction for the configured timeout, the CHILD_SA + gets closed due to inactivity. The default value of 0 disables inactivity + checks. + ''; + + reqid = mkIntParam 0 '' + Fixed reqid to use for this CHILD_SA. This might be helpful in some + scenarios, but works only if each CHILD_SA configuration is instantiated + not more than once. The default of 0 uses dynamic reqids, allocated + incrementally. + ''; + + priority = mkIntParam 0 '' + Optional fixed priority for IPsec policies. This could be useful to + install high-priority drop policies. The default of 0 uses dynamically + calculated priorities based on the size of the traffic selectors. + ''; + + interface = mkOptionalStrParam '' + Optional interface name to restrict outbound IPsec policies. + ''; + + mark_in = mkStrParam "0/0x00000000" '' + Netfilter mark and mask for input traffic. On Linux, Netfilter may + require marks on each packet to match an SA/policy having that option + set. This allows installing duplicate policies and enables Netfilter + rules to select specific SAs/policies for incoming traffic. Note that + inbound marks are only set on policies, by default, unless + <option>mark_in_sa</option> is enabled. The special value + <literal>%unique</literal> sets a unique mark on each CHILD_SA instance, + beyond that the value <literal>%unique-dir</literal> assigns a different + unique mark for each + </para><para> + An additional mask may be appended to the mark, separated by + <literal>/</literal>. The default mask if omitted is + <literal>0xffffffff</literal>. + ''; + + mark_in_sa = mkYesNoParam no '' + Whether to set <option>mark_in</option> on the inbound SA. By default, + the inbound mark is only set on the inbound policy. The tuple destination + address, protocol and SPI is unique and the mark is not required to find + the correct SA, allowing to mark traffic after decryption instead (where + more specific selectors may be used) to match different policies. Marking + packets before decryption is still possible, even if no mark is set on + the SA. + ''; + + mark_out = mkStrParam "0/0x00000000" '' + Netfilter mark and mask for output traffic. On Linux, Netfilter may + require marks on each packet to match a policy/SA having that option + set. This allows installing duplicate policies and enables Netfilter + rules to select specific policies/SAs for outgoing traffic. The special + value <literal>%unique</literal> sets a unique mark on each CHILD_SA + instance, beyond that the value <literal>%unique-dir</literal> assigns a + different unique mark for each CHILD_SA direction (in/out). + </para><para> + An additional mask may be appended to the mark, separated by + <literal>/</literal>. The default mask if omitted is + <literal>0xffffffff</literal>. + ''; + + tfc_padding = mkParamOfType (with lib.types; either int (enum ["mtu"])) 0 '' + Pads ESP packets with additional data to have a consistent ESP packet + size for improved Traffic Flow Confidentiality. The padding defines the + minimum size of all ESP packets sent. The default value of + <literal>0</literal> disables TFC padding, the special value + <literal>mtu</literal> adds TFC padding to create a packet size equal to + the Path Maximum Transfer Unit. + ''; + + replay_window = mkIntParam 32 '' + IPsec replay window to configure for this CHILD_SA. Larger values than + the default of <literal>32</literal> are supported using the Netlink + backend only, a value of <literal>0</literal> disables IPsec replay + protection. + ''; + + hw_offload = mkYesNoParam no '' + Enable hardware offload for this CHILD_SA, if supported by the IPsec + implementation. + ''; + + start_action = mkEnumParam ["none" "trap" "start"] "none" '' + Action to perform after loading the configuration. + <itemizedlist> + <listitem><para> + The default of <literal>none</literal> loads the connection only, which + then can be manually initiated or used as a responder configuration. + </para></listitem> + <listitem><para> + The value <literal>trap</literal> installs a trap policy, which triggers + the tunnel as soon as matching traffic has been detected. + </para></listitem> + <listitem><para> + The value <literal>start</literal> initiates the connection actively. + </para></listitem> + </itemizedlist> + When unloading or replacing a CHILD_SA configuration having a + <option>start_action</option> different from <literal>none</literal>, + the inverse action is performed. Configurations with + <literal>start</literal> get closed, while such with + <literal>trap</literal> get uninstalled. + ''; + + close_action = mkEnumParam ["none" "trap" "start"] "none" '' + Action to perform after a CHILD_SA gets closed by the peer. + <itemizedlist> + <listitem><para> + The default of <literal>none</literal> does not take any action, + </para></listitem> + <listitem><para> + <literal>trap</literal> installs a trap policy for the CHILD_SA. + </para></listitem> + <listitem><para> + <literal>start</literal> tries to re-create the CHILD_SA. + </para></listitem> + </itemizedlist> + </para><para> + <option>close_action</option> does not provide any guarantee that the + CHILD_SA is kept alive. It acts on explicit close messages only, but not + on negotiation failures. Use trap policies to reliably re-create failed + CHILD_SAs. + ''; + + } '' + CHILD_SA configuration sub-section. Each connection definition may have + one or more sections in its <option>children</option> subsection. The + section name defines the name of the CHILD_SA configuration, which must be + unique within the connection (denoted <child> below). + ''; + } '' + Section defining IKE connection configurations, each in its own subsection + with an arbitrary yet unique name + ''; + + secrets = let + mkEapXauthParams = mkPrefixedAttrsOfParams { + secret = mkOptionalStrParam '' + Value of the EAP/XAuth secret. It may either be an ASCII string, a hex + encoded string if it has a 0x prefix or a Base64 encoded string if it + has a 0s prefix in its value. + ''; + + id = mkPrefixedAttrsOfParam (mkOptionalStrParam "") '' + Identity the EAP/XAuth secret belongs to. Multiple unique identities may + be specified, each having an <literal>id</literal> prefix, if a secret + is shared between multiple users. + ''; + + } '' + EAP secret section for a specific secret. Each EAP secret is defined in a + unique section having the <literal>eap</literal> prefix. EAP secrets are + used for XAuth authentication as well. + ''; + + in { + + eap = mkEapXauthParams; + xauth = mkEapXauthParams; + + ntlm = mkPrefixedAttrsOfParams { + secret = mkOptionalStrParam '' + Value of the NTLM secret, which is the NT Hash of the actual secret, + that is, MD4(UTF-16LE(secret)). The resulting 16-byte value may either + be given as a hex encoded string with a 0x prefix or as a Base64 encoded + string with a 0s prefix. + ''; + + id = mkPrefixedAttrsOfParam (mkOptionalStrParam "") '' + Identity the NTLM secret belongs to. Multiple unique identities may be + specified, each having an id prefix, if a secret is shared between + multiple users. + ''; + } '' + NTLM secret section for a specific secret. Each NTLM secret is defined in + a unique section having the <literal>ntlm</literal> prefix. NTLM secrets + may only be used for EAP-MSCHAPv2 authentication. + ''; + + ike = mkPrefixedAttrsOfParams { + secret = mkOptionalStrParam '' + Value of the IKE preshared secret. It may either be an ASCII string, a + hex encoded string if it has a 0x prefix or a Base64 encoded string if + it has a 0s prefix in its value. + ''; + + id = mkPrefixedAttrsOfParam (mkOptionalStrParam "") '' + IKE identity the IKE preshared secret belongs to. Multiple unique + identities may be specified, each having an <literal>id</literal> + prefix, if a secret is shared between multiple peers. + ''; + } '' + IKE preshared secret section for a specific secret. Each IKE PSK is + defined in a unique section having the <literal>ike</literal> prefix. + ''; + + private = mkPrefixedAttrsOfParams { + file = mkOptionalStrParam '' + File name in the private folder for which this passphrase should be used. + ''; + + secret = mkOptionalStrParam '' + Value of decryption passphrase for private key. + ''; + } '' + Private key decryption passphrase for a key in the + <literal>private</literal> folder. + ''; + + rsa = mkPrefixedAttrsOfParams { + file = mkOptionalStrParam '' + File name in the <literal>rsa</literal> folder for which this passphrase + should be used. + ''; + secret = mkOptionalStrParam '' + Value of decryption passphrase for RSA key. + ''; + } '' + Private key decryption passphrase for a key in the <literal>rsa</literal> + folder. + ''; + + ecdsa = mkPrefixedAttrsOfParams { + file = mkOptionalStrParam '' + File name in the <literal>ecdsa</literal> folder for which this + passphrase should be used. + ''; + secret = mkOptionalStrParam '' + Value of decryption passphrase for ECDSA key. + ''; + } '' + Private key decryption passphrase for a key in the + <literal>ecdsa</literal> folder. + ''; + + pkcs8 = mkPrefixedAttrsOfParams { + file = mkOptionalStrParam '' + File name in the <literal>pkcs8</literal> folder for which this + passphrase should be used. + ''; + secret = mkOptionalStrParam '' + Value of decryption passphrase for PKCS#8 key. + ''; + } '' + Private key decryption passphrase for a key in the + <literal>pkcs8</literal> folder. + ''; + + pkcs12 = mkPrefixedAttrsOfParams { + file = mkOptionalStrParam '' + File name in the <literal>pkcs12</literal> folder for which this + passphrase should be used. + ''; + secret = mkOptionalStrParam '' + Value of decryption passphrase for PKCS#12 container. + ''; + } '' + PKCS#12 decryption passphrase for a container in the + <literal>pkcs12</literal> folder. + ''; + + token = mkPrefixedAttrsOfParams { + handle = mkOptionalHexParam '' + Hex-encoded CKA_ID or handle of the private key on the token or TPM, + respectively. + ''; + + slot = mkOptionalIntParam '' + Optional slot number to access the token. + ''; + + module = mkOptionalStrParam '' + Optional PKCS#11 module name to access the token. + ''; + + pin = mkOptionalStrParam '' + Optional PIN required to access the key on the token. If none is + provided the user is prompted during an interactive + <literal>--load-creds</literal> call. + ''; + } ''Definition for a private key that's stored on a token/smartcard/TPM.''; + + }; + + pools = mkAttrsOfParams { + addrs = mkOptionalStrParam '' + Subnet or range defining addresses allocated in pool. Accepts a single + CIDR subnet defining the pool to allocate addresses from or an address + range (<from>-<to>). Pools must be unique and non-overlapping. + ''; + + dns = mkCommaSepListParam [] "Address or CIDR subnets"; + nbns = mkCommaSepListParam [] "Address or CIDR subnets"; + dhcp = mkCommaSepListParam [] "Address or CIDR subnets"; + netmask = mkCommaSepListParam [] "Address or CIDR subnets"; + server = mkCommaSepListParam [] "Address or CIDR subnets"; + subnet = mkCommaSepListParam [] "Address or CIDR subnets"; + split_include = mkCommaSepListParam [] "Address or CIDR subnets"; + split_exclude = mkCommaSepListParam [] "Address or CIDR subnets"; + } '' + Section defining named pools. Named pools may be referenced by connections + with the pools option to assign virtual IPs and other configuration + attributes. Each pool must have a unique name (denoted <name> below). + ''; +} diff --git a/nixos/modules/services/networking/wireguard.nix b/nixos/modules/services/networking/wireguard.nix index 24accd41511c..0591917c7423 100644 --- a/nixos/modules/services/networking/wireguard.nix +++ b/nixos/modules/services/networking/wireguard.nix @@ -53,30 +53,30 @@ let }; preSetup = mkOption { - example = literalExample ['' + example = literalExample '' ${pkgs.iproute}/bin/ip netns add foo - '']; - default = []; - type = with types; listOf str; + ''; + default = ""; + type = with types; coercedTo (listOf str) (concatStringsSep "\n") lines; description = '' - A list of commands called at the start of the interface setup. + Commands called at the start of the interface setup. ''; }; postSetup = mkOption { - example = literalExample ['' - ${pkgs.bash} -c 'printf "nameserver 10.200.100.1" | ${pkgs.openresolv}/bin/resolvconf -a wg0 -m 0' - '']; - default = []; - type = with types; listOf str; - description = "A list of commands called at the end of the interface setup."; + example = literalExample '' + printf "nameserver 10.200.100.1" | ${pkgs.openresolv}/bin/resolvconf -a wg0 -m 0 + ''; + default = ""; + type = with types; coercedTo (listOf str) (concatStringsSep "\n") lines; + description = "Commands called at the end of the interface setup."; }; postShutdown = mkOption { - example = literalExample ["${pkgs.openresolv}/bin/resolvconf -d wg0"]; - default = []; - type = with types; listOf str; - description = "A list of commands called after shutting down the interface."; + example = literalExample "${pkgs.openresolv}/bin/resolvconf -d wg0"; + default = ""; + type = with types; coercedTo (listOf str) (concatStringsSep "\n") lines; + description = "Commands called after shutting down the interface."; }; table = mkOption { @@ -182,9 +182,6 @@ let }; - ipCommand = "${pkgs.iproute}/bin/ip"; - wgCommand = "${pkgs.wireguard}/bin/wg"; - generateUnit = name: values: # exactly one way to specify the private key must be set assert (values.privateKey != null) != (values.privateKeyFile != null); @@ -196,49 +193,53 @@ let after = [ "network.target" ]; wantedBy = [ "multi-user.target" ]; environment.DEVICE = name; + path = with pkgs; [ kmod iproute wireguard ]; serviceConfig = { Type = "oneshot"; RemainAfterExit = true; - ExecStart = flatten([ - values.preSetup + }; + + script = '' + modprobe wireguard + + ${values.preSetup} - "-${ipCommand} link del dev ${name}" - "${ipCommand} link add dev ${name} type wireguard" + ip link add dev ${name} type wireguard - (map (ip: - "${ipCommand} address add ${ip} dev ${name}" - ) values.ips) + ${concatMapStringsSep "\n" (ip: + "ip address add ${ip} dev ${name}" + ) values.ips} - ("${wgCommand} set ${name} private-key ${privKey}" + - optionalString (values.listenPort != null) " listen-port ${toString values.listenPort}") + wg set ${name} private-key ${privKey} ${ + optionalString (values.listenPort != null) " listen-port ${toString values.listenPort}"} - (map (peer: + ${concatMapStringsSep "\n" (peer: assert (peer.presharedKeyFile == null) || (peer.presharedKey == null); # at most one of the two must be set let psk = if peer.presharedKey != null then pkgs.writeText "wg-psk" peer.presharedKey else peer.presharedKeyFile; in - "${wgCommand} set ${name} peer ${peer.publicKey}" + - optionalString (psk != null) " preshared-key ${psk}" + - optionalString (peer.endpoint != null) " endpoint ${peer.endpoint}" + - optionalString (peer.persistentKeepalive != null) " persistent-keepalive ${toString peer.persistentKeepalive}" + - optionalString (peer.allowedIPs != []) " allowed-ips ${concatStringsSep "," peer.allowedIPs}" - ) values.peers) - - "${ipCommand} link set up dev ${name}" - - (optionals (values.allowedIPsAsRoutes != false) (map (peer: - (map (allowedIP: - "${ipCommand} route replace ${allowedIP} dev ${name} table ${values.table}" - ) peer.allowedIPs) - ) values.peers)) - - values.postSetup - ]); - ExecStop = flatten([ - "${ipCommand} link del dev ${name}" - values.postShutdown - ]); - }; + "wg set ${name} peer ${peer.publicKey}" + + optionalString (psk != null) " preshared-key ${psk}" + + optionalString (peer.endpoint != null) " endpoint ${peer.endpoint}" + + optionalString (peer.persistentKeepalive != null) " persistent-keepalive ${toString peer.persistentKeepalive}" + + optionalString (peer.allowedIPs != []) " allowed-ips ${concatStringsSep "," peer.allowedIPs}" + ) values.peers} + + ip link set up dev ${name} + + ${optionalString (values.allowedIPsAsRoutes != false) (concatStringsSep "\n" (concatMap (peer: + (map (allowedIP: + "ip route replace ${allowedIP} dev ${name} table ${values.table}" + ) peer.allowedIPs) + ) values.peers))} + + ${values.postSetup} + ''; + + preStop = '' + ip link del dev ${name} + ${values.postShutdown} + ''; }; in diff --git a/nixos/modules/services/search/elasticsearch.nix b/nixos/modules/services/search/elasticsearch.nix index adef500b7b5c..d61f588205af 100644 --- a/nixos/modules/services/search/elasticsearch.nix +++ b/nixos/modules/services/search/elasticsearch.nix @@ -32,8 +32,11 @@ let (if es5 then (pkgs.writeTextDir "log4j2.properties" cfg.logging) else (pkgs.writeTextDir "logging.yml" cfg.logging)) ]; - # Elasticsearch 5.x won't start when the scripts directory does not exist - postBuild = if es5 then "${pkgs.coreutils}/bin/mkdir -p $out/scripts" else ""; + postBuild = concatStringsSep "\n" (concatLists [ + # Elasticsearch 5.x won't start when the scripts directory does not exist + (optional es5 "${pkgs.coreutils}/bin/mkdir -p $out/scripts") + (optional es6 "ln -s ${cfg.package}/config/jvm.options $out/jvm.options") + ]); }; esPlugins = pkgs.buildEnv { diff --git a/nixos/modules/services/security/tor.nix b/nixos/modules/services/security/tor.nix index 2c727de21027..806252f49b8d 100644 --- a/nixos/modules/services/security/tor.nix +++ b/nixos/modules/services/security/tor.nix @@ -703,14 +703,10 @@ in after = [ "network.target" ]; restartTriggers = [ torRcFile ]; - # Translated from the upstream contrib/dist/tor.service.in - preStart = '' - install -o tor -g tor -d ${torDirectory}/onion ${torRunDirectory} - ${pkgs.tor}/bin/tor -f ${torRcFile} --verify-config - ''; - serviceConfig = { Type = "simple"; + # Translated from the upstream contrib/dist/tor.service.in + ExecStartPre = "${pkgs.tor}/bin/tor -f ${torRcFile} --verify-config"; ExecStart = "${pkgs.tor}/bin/tor -f ${torRcFile} --RunAsDaemon 0"; ExecReload = "${pkgs.coreutils}/bin/kill -HUP $MAINPID"; KillSignal = "SIGINT"; @@ -725,6 +721,8 @@ in # DeviceAllow /dev/urandom r # .. but we can't specify DeviceAllow multiple times. 'closed' # is close enough. + RuntimeDirectory = "tor"; + StateDirectory = [ "tor" "tor/onion" ]; PrivateTmp = "yes"; DevicePolicy = "closed"; InaccessibleDirectories = "/home"; diff --git a/nixos/modules/services/torrent/transmission.nix b/nixos/modules/services/torrent/transmission.nix index 0998d5a7107a..3564afd77f41 100644 --- a/nixos/modules/services/torrent/transmission.nix +++ b/nixos/modules/services/torrent/transmission.nix @@ -147,6 +147,7 @@ in ${getLib pkgs.libcap}/lib/libcap*.so* mr, ${getLib pkgs.attr}/lib/libattr*.so* mr, ${getLib pkgs.lz4}/lib/liblz4*.so* mr, + ${getLib pkgs.libkrb5}/lib/lib*.so* mr, @{PROC}/sys/kernel/random/uuid r, @{PROC}/sys/vm/overcommit_memory r, diff --git a/nixos/modules/services/web-apps/atlassian/jira.nix b/nixos/modules/services/web-apps/atlassian/jira.nix index 81ee8154326c..13c5951524d9 100644 --- a/nixos/modules/services/web-apps/atlassian/jira.nix +++ b/nixos/modules/services/web-apps/atlassian/jira.nix @@ -155,7 +155,7 @@ in requires = [ "postgresql.service" ]; after = [ "postgresql.service" ]; - path = [ cfg.jrePackage ]; + path = [ cfg.jrePackage pkgs.bash ]; environment = { JIRA_USER = cfg.user; diff --git a/nixos/modules/services/web-apps/tt-rss.nix b/nixos/modules/services/web-apps/tt-rss.nix index 8f7a56189a07..610c6463a5eb 100644 --- a/nixos/modules/services/web-apps/tt-rss.nix +++ b/nixos/modules/services/web-apps/tt-rss.nix @@ -466,10 +466,10 @@ let ''; }; - services.nginx = { + # NOTE: No configuration is done if not using virtual host + services.nginx = mkIf (cfg.virtualHost != null) { enable = true; - # NOTE: No configuration is done if not using virtual host - virtualHosts = mkIf (cfg.virtualHost != null) { + virtualHosts = { "${cfg.virtualHost}" = { root = "${cfg.root}"; diff --git a/nixos/modules/services/web-servers/lighttpd/gitweb.nix b/nixos/modules/services/web-servers/lighttpd/gitweb.nix index 37128d90401d..c494d6966a7f 100644 --- a/nixos/modules/services/web-servers/lighttpd/gitweb.nix +++ b/nixos/modules/services/web-servers/lighttpd/gitweb.nix @@ -4,6 +4,9 @@ with lib; let cfg = config.services.gitweb; + package = pkgs.gitweb.override (optionalAttrs cfg.gitwebTheme { + gitwebTheme = true; + }); in { @@ -34,8 +37,8 @@ in "^/gitweb$" => "/gitweb/" ) alias.url = ( - "/gitweb/static/" => "${pkgs.git}/share/gitweb/static/", - "/gitweb/" => "${pkgs.git}/share/gitweb/gitweb.cgi" + "/gitweb/static/" => "${package}/static/", + "/gitweb/" => "${package}/gitweb.cgi" ) setenv.add-environment = ( "GITWEB_CONFIG" => "${cfg.gitwebConfigFile}", diff --git a/nixos/modules/services/web-servers/nginx/default.nix b/nixos/modules/services/web-servers/nginx/default.nix index 938a8a1fe334..815c3147e647 100644 --- a/nixos/modules/services/web-servers/nginx/default.nix +++ b/nixos/modules/services/web-servers/nginx/default.nix @@ -218,7 +218,10 @@ let ssl_certificate_key ${vhost.sslCertificateKey}; ''} - ${optionalString (vhost.basicAuth != {}) (mkBasicAuth vhostName vhost.basicAuth)} + ${optionalString (vhost.basicAuthFile != null || vhost.basicAuth != {}) '' + auth_basic secured; + auth_basic_user_file ${if vhost.basicAuthFile != null then vhost.basicAuthFile else mkHtpasswd vhostName vhost.basicAuth}; + ''} ${mkLocations vhost.locations} @@ -248,16 +251,11 @@ let ${optionalString (config.proxyPass != null && cfg.recommendedProxySettings) "include ${recommendedProxyConfig};"} } '') locations); - mkBasicAuth = vhostName: authDef: let - htpasswdFile = pkgs.writeText "${vhostName}.htpasswd" ( - concatStringsSep "\n" (mapAttrsToList (user: password: '' - ${user}:{PLAIN}${password} - '') authDef) - ); - in '' - auth_basic secured; - auth_basic_user_file ${htpasswdFile}; - ''; + mkHtpasswd = vhostName: authDef: pkgs.writeText "${vhostName}.htpasswd" ( + concatStringsSep "\n" (mapAttrsToList (user: password: '' + ${user}:{PLAIN}${password} + '') authDef) + ); in { diff --git a/nixos/modules/services/web-servers/nginx/gitweb.nix b/nixos/modules/services/web-servers/nginx/gitweb.nix index 3dc3ebc7e4c2..272fd1480185 100644 --- a/nixos/modules/services/web-servers/nginx/gitweb.nix +++ b/nixos/modules/services/web-servers/nginx/gitweb.nix @@ -4,6 +4,9 @@ with lib; let cfg = config.services.gitweb; + package = pkgs.gitweb.override (optionalAttrs cfg.gitwebTheme { + gitwebTheme = true; + }); in { @@ -24,7 +27,7 @@ in systemd.services.gitweb = { description = "GitWeb service"; - script = "${pkgs.git}/share/gitweb/gitweb.cgi --fastcgi --nproc=1"; + script = "${package}/gitweb.cgi --fastcgi --nproc=1"; environment = { FCGI_SOCKET_PATH = "/run/gitweb/gitweb.sock"; }; @@ -38,11 +41,10 @@ in services.nginx = { virtualHosts.default = { - locations."/gitweb/" = { - root = "${pkgs.git}/share"; - tryFiles = "$uri @gitweb"; + locations."/gitweb/static/" = { + alias = "${package}/static/"; }; - locations."@gitweb" = { + locations."/gitweb/" = { extraConfig = '' include ${pkgs.nginx}/conf/fastcgi_params; fastcgi_param GITWEB_CONFIG ${cfg.gitwebConfigFile}; diff --git a/nixos/modules/services/web-servers/nginx/vhost-options.nix b/nixos/modules/services/web-servers/nginx/vhost-options.nix index bf18108a1a3c..f014d817e80e 100644 --- a/nixos/modules/services/web-servers/nginx/vhost-options.nix +++ b/nixos/modules/services/web-servers/nginx/vhost-options.nix @@ -193,6 +193,14 @@ with lib; ''; }; + basicAuthFile = mkOption { + type = types.nullOr types.path; + default = null; + description = '' + Basic Auth password file for a vhost. + ''; + }; + locations = mkOption { type = types.attrsOf (types.submodule (import ./location-options.nix { inherit lib; diff --git a/nixos/modules/system/boot/grow-partition.nix b/nixos/modules/system/boot/grow-partition.nix index c4c6d82dc5c8..1e6f9e442b67 100644 --- a/nixos/modules/system/boot/grow-partition.nix +++ b/nixos/modules/system/boot/grow-partition.nix @@ -32,8 +32,15 @@ with lib; rootDevice="${config.fileSystems."/".device}" if [ -e "$rootDevice" ]; then rootDevice="$(readlink -f "$rootDevice")" - parentDevice="$(lsblk -npo PKNAME "$rootDevice")" - TMPDIR=/run sh $(type -P growpart) "$parentDevice" "''${rootDevice#$parentDevice}" + parentDevice="$rootDevice" + while [ "''${parentDevice%[0-9]}" != "''${parentDevice}" ]; do + parentDevice="''${parentDevice%[0-9]}"; + done + partNum="''${rootDevice#''${parentDevice}}" + if [ "''${parentDevice%[0-9]p}" != "''${parentDevice}" ] && [ -b "''${parentDevice%p}" ]; then + parentDevice="''${parentDevice%p}" + fi + TMPDIR=/run sh $(type -P growpart) "$parentDevice" "$partNum" udevadm settle fi ''; diff --git a/nixos/modules/system/boot/kernel.nix b/nixos/modules/system/boot/kernel.nix index 3bd7d3558269..8ea05ed14687 100644 --- a/nixos/modules/system/boot/kernel.nix +++ b/nixos/modules/system/boot/kernel.nix @@ -77,8 +77,8 @@ in type = types.int; default = 4; description = '' - The kernel console log level. Log messages with a priority - numerically less than this will not appear on the console. + The kernel console <literal>loglevel</literal>. All Kernel Messages with a log level smaller + than this setting will be printed to the console. ''; }; diff --git a/nixos/modules/system/boot/loader/raspberrypi/builder.sh b/nixos/modules/system/boot/loader/raspberrypi/builder.sh index f627d093eafb..8adc8a6a7e11 100644 --- a/nixos/modules/system/boot/loader/raspberrypi/builder.sh +++ b/nixos/modules/system/boot/loader/raspberrypi/builder.sh @@ -109,11 +109,15 @@ copyForced $fwdir/bootcode.bin /boot/bootcode.bin copyForced $fwdir/fixup.dat /boot/fixup.dat copyForced $fwdir/fixup_cd.dat /boot/fixup_cd.dat copyForced $fwdir/fixup_db.dat /boot/fixup_db.dat +copyForced $fwdir/fixup_x.dat /boot/fixup_x.dat copyForced $fwdir/start.elf /boot/start.elf copyForced $fwdir/start_cd.elf /boot/start_cd.elf copyForced $fwdir/start_db.elf /boot/start_db.elf copyForced $fwdir/start_x.elf /boot/start_x.elf +# Add the config.txt +copyForced @configTxt@ /boot/config.txt + # Remove obsolete files from /boot and /boot/old. for fn in /boot/old/*linux* /boot/old/*initrd-initrd* /boot/bcm*.dtb; do if ! test "${filesCopied[$fn]}" = 1; then diff --git a/nixos/modules/system/boot/loader/raspberrypi/builder_uboot.nix b/nixos/modules/system/boot/loader/raspberrypi/builder_uboot.nix new file mode 100644 index 000000000000..47f25a9c2b1b --- /dev/null +++ b/nixos/modules/system/boot/loader/raspberrypi/builder_uboot.nix @@ -0,0 +1,34 @@ +{ config, pkgs, configTxt }: + +let + cfg = config.boot.loader.raspberryPi; + isAarch64 = pkgs.stdenv.isAarch64; + + uboot = + if cfg.version == 1 then + pkgs.ubootRaspberryPi + else if cfg.version == 2 then + pkgs.ubootRaspberryPi2 + else + if isAarch64 then + pkgs.ubootRaspberryPi3_64bit + else + pkgs.ubootRaspberryPi3_32bit; + + extlinuxConfBuilder = + import ../generic-extlinux-compatible/extlinux-conf-builder.nix { + inherit pkgs; + }; +in +pkgs.substituteAll { + src = ./builder_uboot.sh; + isExecutable = true; + inherit (pkgs) bash; + path = [pkgs.coreutils pkgs.gnused pkgs.gnugrep]; + firmware = pkgs.raspberrypifw; + inherit uboot; + inherit configTxt; + inherit extlinuxConfBuilder; + version = cfg.version; +} + diff --git a/nixos/modules/system/boot/loader/raspberrypi/builder_uboot.sh b/nixos/modules/system/boot/loader/raspberrypi/builder_uboot.sh new file mode 100644 index 000000000000..36bf15066274 --- /dev/null +++ b/nixos/modules/system/boot/loader/raspberrypi/builder_uboot.sh @@ -0,0 +1,29 @@ +#! @bash@/bin/sh -e + +copyForced() { + local src="$1" + local dst="$2" + cp $src $dst.tmp + mv $dst.tmp $dst +} + +# Call the extlinux builder +"@extlinuxConfBuilder@" "$@" + +# Add the firmware files +fwdir=@firmware@/share/raspberrypi/boot/ +copyForced $fwdir/bootcode.bin /boot/bootcode.bin +copyForced $fwdir/fixup.dat /boot/fixup.dat +copyForced $fwdir/fixup_cd.dat /boot/fixup_cd.dat +copyForced $fwdir/fixup_db.dat /boot/fixup_db.dat +copyForced $fwdir/fixup_x.dat /boot/fixup_x.dat +copyForced $fwdir/start.elf /boot/start.elf +copyForced $fwdir/start_cd.elf /boot/start_cd.elf +copyForced $fwdir/start_db.elf /boot/start_db.elf +copyForced $fwdir/start_x.elf /boot/start_x.elf + +# Add the uboot file +copyForced @uboot@/u-boot.bin /boot/u-boot-rpi.bin + +# Add the config.txt +copyForced @configTxt@ /boot/config.txt diff --git a/nixos/modules/system/boot/loader/raspberrypi/raspberrypi.nix b/nixos/modules/system/boot/loader/raspberrypi/raspberrypi.nix index f246d04284ca..f974d07da9e5 100644 --- a/nixos/modules/system/boot/loader/raspberrypi/raspberrypi.nix +++ b/nixos/modules/system/boot/loader/raspberrypi/raspberrypi.nix @@ -5,42 +5,108 @@ with lib; let cfg = config.boot.loader.raspberryPi; - builder = pkgs.substituteAll { + builderGeneric = pkgs.substituteAll { src = ./builder.sh; isExecutable = true; inherit (pkgs) bash; path = [pkgs.coreutils pkgs.gnused pkgs.gnugrep]; firmware = pkgs.raspberrypifw; version = cfg.version; + inherit configTxt; }; platform = pkgs.stdenv.platform; + builderUboot = import ./builder_uboot.nix { inherit config; inherit pkgs; inherit configTxt; }; + + builder = + if cfg.uboot.enable then + "${builderUboot} -g ${toString cfg.uboot.configurationLimit} -t ${timeoutStr} -c" + else + builderGeneric; + + blCfg = config.boot.loader; + timeoutStr = if blCfg.timeout == null then "-1" else toString blCfg.timeout; + + isAarch64 = pkgs.stdenv.isAarch64; + optional = pkgs.stdenv.lib.optionalString; + + configTxt = + pkgs.writeText "config.txt" ('' + # U-Boot used to need this to work, regardless of whether UART is actually used or not. + # TODO: check when/if this can be removed. + enable_uart=1 + + # Prevent the firmware from smashing the framebuffer setup done by the mainline kernel + # when attempting to show low-voltage or overtemperature warnings. + avoid_warnings=1 + '' + optional isAarch64 '' + # Boot in 64-bit mode. + arm_control=0x200 + '' + optional cfg.uboot.enable '' + kernel=u-boot-rpi.bin + '' + optional (cfg.firmwareConfig != null) cfg.firmwareConfig); + in { options = { - boot.loader.raspberryPi.enable = mkOption { - default = false; - type = types.bool; - description = '' - Whether to create files with the system generations in - <literal>/boot</literal>. - <literal>/boot/old</literal> will hold files from old generations. - ''; - }; + boot.loader.raspberryPi = { + enable = mkOption { + default = false; + type = types.bool; + description = '' + Whether to create files with the system generations in + <literal>/boot</literal>. + <literal>/boot/old</literal> will hold files from old generations. + ''; + }; - boot.loader.raspberryPi.version = mkOption { - default = 2; - type = types.enum [ 1 2 3 ]; - description = '' - ''; - }; + version = mkOption { + default = 2; + type = types.enum [ 1 2 3 ]; + description = '' + ''; + }; + + uboot = { + enable = mkOption { + default = false; + type = types.bool; + description = '' + Enable using uboot as bootmanager for the raspberry pi. + ''; + }; + + configurationLimit = mkOption { + default = 20; + example = 10; + type = types.int; + description = '' + Maximum number of configurations in the boot menu. + ''; + }; + + }; + firmwareConfig = mkOption { + default = null; + type = types.nullOr types.string; + description = '' + Extra options that will be appended to <literal>/boot/config.txt</literal> file. + For possible values, see: https://www.raspberrypi.org/documentation/configuration/config-txt/ + ''; + }; + }; }; - config = mkIf config.boot.loader.raspberryPi.enable { + config = mkIf cfg.enable { + assertions = singleton { + assertion = !pkgs.stdenv.isAarch64 || cfg.version == 3; + message = "Only Raspberry Pi 3 supports aarch64."; + }; + system.build.installBootLoader = builder; system.boot.loader.id = "raspberrypi"; system.boot.loader.kernelFile = platform.kernelTarget; diff --git a/nixos/modules/system/boot/systemd-nspawn.nix b/nixos/modules/system/boot/systemd-nspawn.nix index 8fa9f8b795e5..64b3b8b584e3 100644 --- a/nixos/modules/system/boot/systemd-nspawn.nix +++ b/nixos/modules/system/boot/systemd-nspawn.nix @@ -110,7 +110,7 @@ in { config = let - units = mapAttrs' (n: v: nameValuePair "${n}.nspawn" (instanceToUnit n v)) cfg; + units = mapAttrs' (n: v: let nspawnFile = "${n}.nspawn"; in nameValuePair nspawnFile (instanceToUnit nspawnFile v)) cfg; in mkIf (cfg != {}) { environment.etc."systemd/nspawn".source = generateUnits "nspawn" units [] []; diff --git a/nixos/modules/system/boot/systemd-unit-options.nix b/nixos/modules/system/boot/systemd-unit-options.nix index 43a9c28bb694..5255f1a1b97a 100644 --- a/nixos/modules/system/boot/systemd-unit-options.nix +++ b/nixos/modules/system/boot/systemd-unit-options.nix @@ -217,7 +217,7 @@ in rec { environment = mkOption { default = {}; - type = types.attrs; # FIXME + type = with types; attrsOf (nullOr (either str package)); example = { PATH = "/foo/bar/bin"; LANG = "nl_NL.UTF-8"; }; description = "Environment variables passed to the service's processes."; }; diff --git a/nixos/modules/system/boot/systemd.nix b/nixos/modules/system/boot/systemd.nix index bd2d52c30b4b..d2fe33488a7a 100644 --- a/nixos/modules/system/boot/systemd.nix +++ b/nixos/modules/system/boot/systemd.nix @@ -515,7 +515,7 @@ in }; systemd.globalEnvironment = mkOption { - type = types.attrs; + type = with types; attrsOf (nullOr (either str package)); default = {}; example = { TZ = "CET"; }; description = '' diff --git a/nixos/modules/tasks/filesystems/zfs.nix b/nixos/modules/tasks/filesystems/zfs.nix index 50cf30cc48de..c3bf897d51fd 100644 --- a/nixos/modules/tasks/filesystems/zfs.nix +++ b/nixos/modules/tasks/filesystems/zfs.nix @@ -305,6 +305,8 @@ in } ]; + virtualisation.lxd.zfsSupport = true; + boot = { kernelModules = [ "spl" "zfs" ] ; extraModulePackages = with packages; [ spl zfs ]; diff --git a/nixos/modules/virtualisation/azure-agent.nix b/nixos/modules/virtualisation/azure-agent.nix index 201d5f71ba34..b7ab54aab7ec 100644 --- a/nixos/modules/virtualisation/azure-agent.nix +++ b/nixos/modules/virtualisation/azure-agent.nix @@ -66,6 +66,10 @@ in default = false; description = "Whether to enable verbose logging."; }; + mountResourceDisk = mkOption { + default = true; + description = "Whether the agent should format (ext4) and mount the resource disk to /mnt/resource."; + }; }; ###### implementation @@ -112,7 +116,7 @@ in Provisioning.ExecuteCustomData=n # Format if unformatted. If 'n', resource disk will not be mounted. - ResourceDisk.Format=y + ResourceDisk.Format=${if cfg.mountResourceDisk then "y" else "n"} # File system on the resource disk # Typically ext3 or ext4. FreeBSD images should use 'ufs2' here. @@ -181,7 +185,7 @@ in after = [ "network-online.target" "sshd.service" ]; wants = [ "network-online.target" ]; - path = [ pkgs.e2fsprogs ]; + path = [ pkgs.e2fsprogs pkgs.bash ]; description = "Windows Azure Agent Service"; unitConfig.ConditionPathExists = "/etc/waagent.conf"; serviceConfig = { diff --git a/nixos/modules/virtualisation/containers.nix b/nixos/modules/virtualisation/containers.nix index e54a5fe7d40c..248c2fc1fb23 100644 --- a/nixos/modules/virtualisation/containers.nix +++ b/nixos/modules/virtualisation/containers.nix @@ -112,7 +112,7 @@ let # If the host is 64-bit and the container is 32-bit, add a # --personality flag. - ${optionalString (config.nixpkgs.system == "x86_64-linux") '' + ${optionalString (config.nixpkgs.localSystem.system == "x86_64-linux") '' if [ "$(< ''${SYSTEM_PATH:-/nix/var/nix/profiles/per-container/$INSTANCE/system}/system)" = i686-linux ]; then extraFlags+=" --personality=x86" fi @@ -255,7 +255,7 @@ let }; - system = config.nixpkgs.system; + system = config.nixpkgs.localSystem.system; bindMountOpts = { name, config, ... }: { @@ -575,6 +575,16 @@ in ''; }; + extraFlags = mkOption { + type = types.listOf types.str; + default = []; + example = [ "--drop-capability=CAP_SYS_CHROOT" ]; + description = '' + Extra flags passed to the systemd-nspawn command. + See systemd-nspawn(1) for details. + ''; + }; + } // networkOptions; config = mkMerge @@ -714,7 +724,9 @@ in ${optionalString cfg.autoStart '' AUTO_START=1 ''} - EXTRA_NSPAWN_FLAGS="${mkBindFlags cfg.bindMounts}" + EXTRA_NSPAWN_FLAGS="${mkBindFlags cfg.bindMounts + + optionalString (cfg.extraFlags != []) + (" " + concatStringsSep " " cfg.extraFlags)}" ''; }) config.containers; diff --git a/nixos/modules/virtualisation/lxc.nix b/nixos/modules/virtualisation/lxc.nix index 2310fe984325..9b5adaf08249 100644 --- a/nixos/modules/virtualisation/lxc.nix +++ b/nixos/modules/virtualisation/lxc.nix @@ -74,6 +74,9 @@ in systemd.tmpfiles.rules = [ "d /var/lib/lxc/rootfs 0755 root root -" ]; security.apparmor.packages = [ pkgs.lxc ]; - security.apparmor.profiles = [ "${pkgs.lxc}/etc/apparmor.d/lxc-containers" ]; + security.apparmor.profiles = [ + "${pkgs.lxc}/etc/apparmor.d/lxc-containers" + "${pkgs.lxc}/etc/apparmor.d/usr.bin.lxc-start" + ]; }; } diff --git a/nixos/modules/virtualisation/lxd.nix b/nixos/modules/virtualisation/lxd.nix index 4988886baf60..3e76cdacfc4b 100644 --- a/nixos/modules/virtualisation/lxd.nix +++ b/nixos/modules/virtualisation/lxd.nix @@ -15,28 +15,34 @@ in options = { - virtualisation.lxd.enable = - mkOption { + virtualisation.lxd = { + enable = mkOption { type = types.bool; default = false; - description = - '' - This option enables lxd, a daemon that manages - containers. Users in the "lxd" group can interact with - the daemon (e.g. to start or stop containers) using the - <command>lxc</command> command line tool, among others. - ''; + description = '' + This option enables lxd, a daemon that manages + containers. Users in the "lxd" group can interact with + the daemon (e.g. to start or stop containers) using the + <command>lxc</command> command line tool, among others. + ''; }; - + zfsSupport = mkOption { + type = types.bool; + default = false; + description = '' + enables lxd to use zfs as a storage for containers. + This option is enabled by default if a zfs pool is configured + with nixos. + ''; + }; + }; }; - ###### implementation config = mkIf cfg.enable { - environment.systemPackages = - [ pkgs.lxd ]; + environment.systemPackages = [ pkgs.lxd ]; security.apparmor = { enable = true; @@ -47,31 +53,31 @@ in packages = [ pkgs.lxc ]; }; - systemd.services.lxd = - { description = "LXD Container Management Daemon"; + systemd.services.lxd = { + description = "LXD Container Management Daemon"; - wantedBy = [ "multi-user.target" ]; - after = [ "systemd-udev-settle.service" ]; + wantedBy = [ "multi-user.target" ]; + after = [ "systemd-udev-settle.service" ]; - # TODO(wkennington): Add lvm2 and thin-provisioning-tools - path = with pkgs; [ acl rsync gnutar xz btrfs-progs gzip dnsmasq squashfsTools iproute iptables ]; + path = lib.optional cfg.zfsSupport pkgs.zfs; - preStart = '' - mkdir -m 0755 -p /var/lib/lxc/rootfs - ''; + preStart = '' + mkdir -m 0755 -p /var/lib/lxc/rootfs + ''; - serviceConfig.ExecStart = "@${pkgs.lxd.bin}/bin/lxd lxd --syslog --group lxd"; - serviceConfig.Type = "simple"; - serviceConfig.KillMode = "process"; # when stopping, leave the containers alone + serviceConfig = { + ExecStart = "@${pkgs.lxd.bin}/bin/lxd lxd --group lxd"; + Type = "simple"; + KillMode = "process"; # when stopping, leave the containers alone }; + }; + users.extraGroups.lxd.gid = config.ids.gids.lxd; users.extraUsers.root = { subUidRanges = [ { startUid = 1000000; count = 65536; } ]; subGidRanges = [ { startGid = 1000000; count = 65536; } ]; }; - }; - } diff --git a/nixos/modules/virtualisation/qemu-vm.nix b/nixos/modules/virtualisation/qemu-vm.nix index 45325c6b0d8d..2b78276fcdea 100644 --- a/nixos/modules/virtualisation/qemu-vm.nix +++ b/nixos/modules/virtualisation/qemu-vm.nix @@ -437,7 +437,7 @@ in # FIXME: Consolidate this one day. virtualisation.qemu.options = mkMerge [ (mkIf (pkgs.stdenv.isi686 || pkgs.stdenv.isx86_64) [ "-vga std" "-usb" "-device usb-tablet,bus=usb-bus.0" ]) - (mkIf (pkgs.stdenv.isArm || pkgs.stdenv.isAarch64) [ "-device virtio-gpu-pci" "-device usb-ehci,id=usb0" "-device usb-kbd" "-device usb-tablet" ]) + (mkIf (pkgs.stdenv.isAarch32 || pkgs.stdenv.isAarch64) [ "-device virtio-gpu-pci" "-device usb-ehci,id=usb0" "-device usb-kbd" "-device usb-tablet" ]) ]; # Mount the host filesystem via 9P, and bind-mount the Nix store diff --git a/nixos/release.nix b/nixos/release.nix index 39a6f34aa985..2f779280e6b2 100644 --- a/nixos/release.nix +++ b/nixos/release.nix @@ -166,8 +166,12 @@ in rec { inherit system; }); - sd_image = forMatchingSystems [ "aarch64-linux" ] (system: makeSdImage { - module = ./modules/installer/cd-dvd/sd-image-aarch64.nix; + sd_image = forMatchingSystems [ "armv6l-linux" "armv7l-linux" "aarch64-linux" ] (system: makeSdImage { + module = { + armv6l-linux = ./modules/installer/cd-dvd/sd-image-raspberrypi.nix; + armv7l-linux = ./modules/installer/cd-dvd/sd-image-armv7l-multiplatform.nix; + aarch64-linux = ./modules/installer/cd-dvd/sd-image-aarch64.nix; + }.${system}; inherit system; }); @@ -267,6 +271,7 @@ in rec { tests.deluge = callTest tests/deluge.nix {}; tests.docker = callTestOnMatchingSystems ["x86_64-linux"] tests/docker.nix {}; tests.docker-tools = callTestOnMatchingSystems ["x86_64-linux"] tests/docker-tools.nix {}; + tests.docker-tools-overlay = callTestOnMatchingSystems ["x86_64-linux"] tests/docker-tools-overlay.nix {}; tests.docker-edge = callTestOnMatchingSystems ["x86_64-linux"] tests/docker-edge.nix {}; tests.dovecot = callTest tests/dovecot.nix {}; tests.dnscrypt-proxy = callTestOnMatchingSystems ["x86_64-linux"] tests/dnscrypt-proxy.nix {}; @@ -366,7 +371,7 @@ in rec { tests.prometheus = callTest tests/prometheus.nix {}; tests.prosody = callTest tests/prosody.nix {}; tests.proxy = callTest tests/proxy.nix {}; - # tests.quagga = callTest tests/quagga.nix {}; + tests.quagga = callTest tests/quagga.nix {}; tests.quake3 = callTest tests/quake3.nix {}; tests.rabbitmq = callTest tests/rabbitmq.nix {}; tests.radicale = callTest tests/radicale.nix {}; @@ -380,6 +385,7 @@ in rec { tests.smokeping = callTest tests/smokeping.nix {}; tests.snapper = callTest tests/snapper.nix {}; tests.statsd = callTest tests/statsd.nix {}; + tests.strongswan-swanctl = callTest tests/strongswan-swanctl.nix {}; tests.sudo = callTest tests/sudo.nix {}; tests.systemd = callTest tests/systemd.nix {}; tests.switchTest = callTest tests/switch-test.nix {}; diff --git a/nixos/tests/containers-imperative.nix b/nixos/tests/containers-imperative.nix index 20902913e9a7..015b79b1cee6 100644 --- a/nixos/tests/containers-imperative.nix +++ b/nixos/tests/containers-imperative.nix @@ -15,7 +15,7 @@ import ./make-test.nix ({ pkgs, ...} : { # container available within the VM, because we don't have network access. virtualisation.pathsInNixDB = let emptyContainer = import ../lib/eval-config.nix { - inherit (config.nixpkgs) system; + inherit (config.nixpkgs.localSystem) system; modules = lib.singleton { containers.foo.config = {}; }; diff --git a/nixos/tests/docker-tools-overlay.nix b/nixos/tests/docker-tools-overlay.nix new file mode 100644 index 000000000000..9d7fa3e7a8c5 --- /dev/null +++ b/nixos/tests/docker-tools-overlay.nix @@ -0,0 +1,32 @@ +# this test creates a simple GNU image with docker tools and sees if it executes + +import ./make-test.nix ({ pkgs, ... }: +{ + name = "docker-tools-overlay"; + meta = with pkgs.stdenv.lib.maintainers; { + maintainers = [ lnl7 ]; + }; + + nodes = { + docker = + { config, pkgs, ... }: + { + virtualisation.docker.enable = true; + virtualisation.docker.storageDriver = "overlay"; # defaults to overlay2 + }; + }; + + testScript = + '' + $docker->waitForUnit("sockets.target"); + + $docker->succeed("docker load --input='${pkgs.dockerTools.examples.bash}'"); + $docker->succeed("docker run --rm ${pkgs.dockerTools.examples.bash.imageName} bash --version"); + + # Check if the nix store has correct user permissions depending on what + # storage driver is used, incorrectly built images can show up as readonly. + # drw------- 3 0 0 3 Apr 14 11:36 /nix + # drw------- 99 0 0 100 Apr 14 11:36 /nix/store + $docker->succeed("docker run --rm -u 1000:1000 ${pkgs.dockerTools.examples.bash.imageName} bash --version"); + ''; +}) diff --git a/nixos/tests/docker-tools.nix b/nixos/tests/docker-tools.nix index 9135bca0f4f6..4466081d01e9 100644 --- a/nixos/tests/docker-tools.nix +++ b/nixos/tests/docker-tools.nix @@ -3,7 +3,7 @@ import ./make-test.nix ({ pkgs, ... }: { name = "docker-tools"; meta = with pkgs.stdenv.lib.maintainers; { - maintainers = [ ]; + maintainers = [ lnl7 ]; }; nodes = { @@ -21,12 +21,12 @@ import ./make-test.nix ({ pkgs, ... }: { $docker->waitForUnit("sockets.target"); $docker->succeed("docker load --input='${pkgs.dockerTools.examples.bash}'"); - $docker->succeed("docker run --rm ${pkgs.dockerTools.examples.bash.imageName} /bin/bash --version"); + $docker->succeed("docker run --rm ${pkgs.dockerTools.examples.bash.imageName} bash --version"); $docker->succeed("docker rmi ${pkgs.dockerTools.examples.bash.imageName}"); # Check if the nix store is correctly initialized by listing dependencies of the installed Nix binary $docker->succeed("docker load --input='${pkgs.dockerTools.examples.nix}'"); - $docker->succeed("docker run --rm ${pkgs.dockerTools.examples.nix.imageName} /bin/nix-store -qR ${pkgs.nix}"); + $docker->succeed("docker run --rm ${pkgs.dockerTools.examples.nix.imageName} nix-store -qR ${pkgs.nix}"); $docker->succeed("docker rmi ${pkgs.dockerTools.examples.nix.imageName}"); # To test the pullImage tool diff --git a/nixos/tests/dovecot.nix b/nixos/tests/dovecot.nix index 3814855ed8e7..156079d1d585 100644 --- a/nixos/tests/dovecot.nix +++ b/nixos/tests/dovecot.nix @@ -18,6 +18,18 @@ import ./make-test.nix { MAIL ''; + sendTestMailViaDeliveryAgent = pkgs.writeScriptBin "send-lda" '' + #!${pkgs.stdenv.shell} + + exec ${pkgs.dovecot}/libexec/dovecot/deliver -d bob <<MAIL + From: root@localhost + To: bob@localhost + Subject: Something else... + + I'm running short of ideas! + MAIL + ''; + testImap = pkgs.writeScriptBin "test-imap" '' #!${pkgs.python3.interpreter} import imaplib @@ -39,24 +51,25 @@ import ./make-test.nix { pop = poplib.POP3('localhost') try: - pop.user('alice') + pop.user('bob') pop.pass_('foobar') assert len(pop.list()[1]) == 1 status, fullmail, size = pop.retr(1) assert status.startswith(b'+OK ') body = b"".join(fullmail[fullmail.index(b""):]).strip() - assert body == b'Hello world!' + assert body == b"I'm running short of ideas!" finally: pop.quit() ''; - in [ sendTestMail testImap testPop ]; + in [ sendTestMail sendTestMailViaDeliveryAgent testImap testPop ]; }; testScript = '' $machine->waitForUnit('postfix.service'); $machine->waitForUnit('dovecot2.service'); $machine->succeed('send-testmail'); + $machine->succeed('send-lda'); $machine->waitUntilFails('[ "$(postqueue -p)" != "Mail queue is empty" ]'); $machine->succeed('test-imap'); $machine->succeed('test-pop'); diff --git a/nixos/tests/gnome3-gdm.nix b/nixos/tests/gnome3-gdm.nix index 4b459e93e1be..71ae1709d526 100644 --- a/nixos/tests/gnome3-gdm.nix +++ b/nixos/tests/gnome3-gdm.nix @@ -26,15 +26,22 @@ import ./make-test.nix ({ pkgs, ...} : { testScript = '' + # wait for gdm to start and bring up X + $machine->waitForUnit("display-manager.service"); $machine->waitForX; - $machine->sleep(15); + + # wait for alice to be logged in + $machine->waitForUnit("default.target","alice"); # Check that logging in has given the user ownership of devices. $machine->succeed("getfacl /dev/snd/timer | grep -q alice"); - $machine->succeed("su - alice -c 'DISPLAY=:0.0 gnome-terminal &'"); - $machine->succeed("xauth merge ~alice/.Xauthority"); + # open a terminal and check it's there + $machine->succeed("su - alice -c 'DISPLAY=:0.0 XAUTHORITY=/run/user/\$UID/gdm/Xauthority gnome-terminal'"); + $machine->succeed("xauth merge /run/user/1000/gdm/Xauthority"); $machine->waitForWindow(qr/Terminal/); + + # wait to get a nice screenshot $machine->sleep(20); $machine->screenshot("screen"); ''; diff --git a/nixos/tests/home-assistant.nix b/nixos/tests/home-assistant.nix index 2e45dc78471f..4ebccb7ab868 100644 --- a/nixos/tests/home-assistant.nix +++ b/nixos/tests/home-assistant.nix @@ -51,9 +51,9 @@ in { startAll; $hass->waitForUnit("home-assistant.service"); - # Since config is specified using a Nix attribute set, - # configuration.yaml is a link to the Nix store - $hass->succeed("test -L ${configDir}/configuration.yaml"); + # The config is specified using a Nix attribute set, + # but then converted from JSON to YAML + $hass->succeed("test -f ${configDir}/configuration.yaml"); # Check that Home Assistant's web interface and API can be reached $hass->waitForOpenPort(8123); diff --git a/nixos/tests/kernel-copperhead.nix b/nixos/tests/kernel-copperhead.nix index 07427d7f2a89..0af978f1851f 100644 --- a/nixos/tests/kernel-copperhead.nix +++ b/nixos/tests/kernel-copperhead.nix @@ -6,14 +6,14 @@ import ./make-test.nix ({ pkgs, ...} : { machine = { config, lib, pkgs, ... }: { - boot.kernelPackages = pkgs.linuxPackages_hardened_copperhead; + boot.kernelPackages = pkgs.linuxPackages_copperhead_hardened; }; testScript = '' $machine->succeed("uname -a"); $machine->succeed("uname -s | grep 'Linux'"); - $machine->succeed("uname -a | grep '${pkgs.linuxPackages_hardened_copperhead.kernel.modDirVersion}'"); + $machine->succeed("uname -a | grep '${pkgs.linuxPackages_copperhead_hardened.kernel.modDirVersion}'"); $machine->succeed("uname -a | grep 'hardened'"); ''; }) diff --git a/nixos/tests/keymap.nix b/nixos/tests/keymap.nix index caa5f7107c23..be880388314c 100644 --- a/nixos/tests/keymap.nix +++ b/nixos/tests/keymap.nix @@ -3,46 +3,36 @@ with import ../lib/testing.nix { inherit system; }; let + readyFile = "/tmp/readerReady"; + resultFile = "/tmp/readerResult"; + testReader = pkgs.writeScript "test-input-reader" '' #!${pkgs.stdenv.shell} - readInput() { - touch /tmp/reader.ready - echo "Waiting for '$1' to be typed" - read -r -n1 c - if [ "$c" = "$2" ]; then - echo "SUCCESS: Got back '$c' as expected." - echo 0 >&2 - else - echo "FAIL: Expected '$2' but got '$c' instead." - echo 1 >&2 - fi - } - - main() { - error=0 - while [ $# -gt 0 ]; do - ret="$((readInput "$2" "$3" | systemd-cat -t "$1") 2>&1)" - if [ $ret -ne 0 ]; then error=1; fi - shift 3 - done - return $error - } - - main "$@"; echo -n $? > /tmp/reader.exit + rm -f ${resultFile} ${resultFile}.tmp + logger "testReader: START: Waiting for $1 characters, expecting '$2'." + touch ${readyFile} + read -r -N $1 chars + rm -f ${readyFile} + + if [ "$chars" == "$2" ]; then + logger -s "testReader: PASS: Got '$2' as expected." 2>${resultFile}.tmp + else + logger -s "testReader: FAIL: Expected '$2' but got '$chars'." 2>${resultFile}.tmp + fi + # rename after the file is written to prevent a race condition + mv ${resultFile}.tmp ${resultFile} ''; - mkReaderInput = testname: { qwerty, expect }: with pkgs.lib; let - lq = length qwerty; - le = length expect; - msg = "`qwerty' (${lq}) and `expect' (${le}) lists" - + " need to be of the same length!"; - result = flatten (zipListsWith (a: b: [testname a b]) qwerty expect); - in if lq != le then throw msg else result; mkKeyboardTest = layout: { extraConfig ? {}, tests }: with pkgs.lib; let - readerInput = flatten (mapAttrsToList mkReaderInput tests); + combinedTests = foldAttrs (acc: val: acc ++ val) [] (builtins.attrValues tests); perlStr = val: "'${escape ["'" "\\"] val}'"; - perlReaderInput = concatMapStringsSep ", " perlStr readerInput; + lq = length combinedTests.qwerty; + le = length combinedTests.expect; + msg = "length mismatch between qwerty (${toString lq}) and expect (${toString le}) lists!"; + send = concatMapStringsSep ", " perlStr combinedTests.qwerty; + expect = if (lq == le) then concatStrings combinedTests.expect else throw msg; + in makeTest { name = "keymap-${layout}"; @@ -50,38 +40,40 @@ let machine.i18n.consoleKeyMap = mkOverride 900 layout; machine.services.xserver.layout = mkOverride 900 layout; machine.imports = [ ./common/x11.nix extraConfig ]; - machine.services.xserver.displayManager.slim.enable = true; testScript = '' - sub waitCatAndDelete ($) { - return $machine->succeed( - "for i in \$(seq 600); do if [ -e '$_[0]' ]; then ". - "cat '$_[0]' && rm -f '$_[0]' && exit 0; ". - "fi; sleep 0.1; done; echo timed out after 60 seconds >&2; exit 1" - ); - }; sub mkTest ($$) { my ($desc, $cmd) = @_; - my @testdata = (${perlReaderInput}); - my $shellTestdata = join ' ', map { "'".s/'/'\\'''/gr."'" } @testdata; - subtest $desc, sub { - $machine->succeed("$cmd ${testReader} $shellTestdata &"); - while (my ($testname, $qwerty, $expect) = splice(@testdata, 0, 3)) { - waitCatAndDelete "/tmp/reader.ready"; - $machine->sendKeys($qwerty); - }; - my $exitcode = waitCatAndDelete "/tmp/reader.exit"; - die "tests for $desc failed" if $exitcode ne 0; + # prepare and start testReader + $machine->execute("rm -f ${readyFile} ${resultFile}"); + $machine->succeed("$cmd ${testReader} ${toString le} ".q(${escapeShellArg expect} & )); + + if ($desc eq "Xorg keymap") { + # make sure the xterm window is open and has focus + $machine->waitForWindow(qr/testterm/); + $machine->waitUntilSucceeds("${pkgs.xdotool}/bin/xdotool search --sync --onlyvisible --class testterm windowfocus --sync"); + } + + # wait for reader to be ready + $machine->waitForFile("${readyFile}"); + $machine->sleep(1); + + # send all keys + foreach ((${send})) { $machine->sendKeys($_); }; + + # wait for result and check + $machine->waitForFile("${resultFile}"); + $machine->succeed("grep -q 'PASS:' ${resultFile}"); }; - } + }; $machine->waitForX; mkTest "VT keymap", "openvt -sw --"; - mkTest "Xorg keymap", "DISPLAY=:0 xterm -fullscreen -e"; + mkTest "Xorg keymap", "DISPLAY=:0 xterm -title testterm -class testterm -fullscreen -e"; ''; }; diff --git a/nixos/tests/strongswan-swanctl.nix b/nixos/tests/strongswan-swanctl.nix new file mode 100644 index 000000000000..021743021b40 --- /dev/null +++ b/nixos/tests/strongswan-swanctl.nix @@ -0,0 +1,148 @@ +# This strongswan-swanctl test is based on: +# https://www.strongswan.org/testing/testresults/swanctl/rw-psk-ipv4/index.html +# https://github.com/strongswan/strongswan/tree/master/testing/tests/swanctl/rw-psk-ipv4 +# +# The roadwarrior carol sets up a connection to gateway moon. The authentication +# is based on pre-shared keys and IPv4 addresses. Upon the successful +# establishment of the IPsec tunnels, the specified updown script automatically +# inserts iptables-based firewall rules that let pass the tunneled traffic. In +# order to test both tunnel and firewall, carol pings the client alice behind +# the gateway moon. +# +# alice moon carol +# eth1------vlan_0------eth1 eth2------vlan_1------eth1 +# 192.168.0.1 192.168.0.3 192.168.1.3 192.168.1.2 +# +# See the NixOS manual for how to run this test: +# https://nixos.org/nixos/manual/index.html#sec-running-nixos-tests-interactively + +import ./make-test.nix ({ pkgs, ...} : + +let + allowESP = "iptables --insert INPUT --protocol ESP --jump ACCEPT"; + + # Shared VPN settings: + vlan0 = "192.168.0.0/24"; + carolIp = "192.168.1.2"; + moonIp = "192.168.1.3"; + version = 2; + secret = "0sFpZAZqEN6Ti9sqt4ZP5EWcqx"; + esp_proposals = [ "aes128gcm128-x25519" ]; + proposals = [ "aes128-sha256-x25519" ]; +in { + name = "strongswan-swanctl"; + meta.maintainers = with pkgs.stdenv.lib.maintainers; [ basvandijk ]; + nodes = { + + alice = { nodes, ... } : { + virtualisation.vlans = [ 0 ]; + networking = { + dhcpcd.enable = false; + defaultGateway = "192.168.0.3"; + }; + }; + + moon = {pkgs, config, nodes, ...} : + let strongswan = config.services.strongswan-swanctl.package; + in { + virtualisation.vlans = [ 0 1 ]; + networking = { + dhcpcd.enable = false; + firewall = { + allowedUDPPorts = [ 4500 500 ]; + extraCommands = allowESP; + }; + nat = { + enable = true; + internalIPs = [ vlan0 ]; + internalInterfaces = [ "eth1" ]; + externalIP = moonIp; + externalInterface = "eth2"; + }; + }; + environment.systemPackages = [ strongswan ]; + services.strongswan-swanctl = { + enable = true; + swanctl = { + connections = { + "rw" = { + local_addrs = [ moonIp ]; + local."main" = { + auth = "psk"; + }; + remote."main" = { + auth = "psk"; + }; + children = { + "net" = { + local_ts = [ vlan0 ]; + updown = "${strongswan}/libexec/ipsec/_updown iptables"; + inherit esp_proposals; + }; + }; + inherit version; + inherit proposals; + }; + }; + secrets = { + ike."carol" = { + id."main" = carolIp; + inherit secret; + }; + }; + }; + }; + }; + + carol = {pkgs, config, nodes, ...} : + let strongswan = config.services.strongswan-swanctl.package; + in { + virtualisation.vlans = [ 1 ]; + networking = { + dhcpcd.enable = false; + firewall.extraCommands = allowESP; + }; + environment.systemPackages = [ strongswan ]; + services.strongswan-swanctl = { + enable = true; + swanctl = { + connections = { + "home" = { + local_addrs = [ carolIp ]; + remote_addrs = [ moonIp ]; + local."main" = { + auth = "psk"; + id = carolIp; + }; + remote."main" = { + auth = "psk"; + id = moonIp; + }; + children = { + "home" = { + remote_ts = [ vlan0 ]; + start_action = "trap"; + updown = "${strongswan}/libexec/ipsec/_updown iptables"; + inherit esp_proposals; + }; + }; + inherit version; + inherit proposals; + }; + }; + secrets = { + ike."moon" = { + id."main" = moonIp; + inherit secret; + }; + }; + }; + }; + }; + + }; + testScript = '' + startAll(); + $carol->waitUntilSucceeds("ping -c 1 alice"); + ''; +}) diff --git a/nixos/tests/systemd.nix b/nixos/tests/systemd.nix index 2df6f341c4ef..65aa553b3148 100644 --- a/nixos/tests/systemd.nix +++ b/nixos/tests/systemd.nix @@ -46,6 +46,8 @@ import ./make-test.nix { testScript = '' $machine->waitForX; + # wait for user services + $machine->waitForUnit("default.target","alice"); # Regression test for https://github.com/NixOS/nixpkgs/issues/35415 subtest "configuration files are recognized by systemd", sub { diff --git a/pkgs/applications/altcoins/bitcoin-abc.nix b/pkgs/applications/altcoins/bitcoin-abc.nix index 219ab5d4f805..35488732117d 100644 --- a/pkgs/applications/altcoins/bitcoin-abc.nix +++ b/pkgs/applications/altcoins/bitcoin-abc.nix @@ -7,13 +7,13 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "bitcoin" + (toString (optional (!withGui) "d")) + "-abc-" + version; - version = "0.16.2"; + version = "0.17.0"; src = fetchFromGitHub { owner = "bitcoin-ABC"; repo = "bitcoin-abc"; rev = "v${version}"; - sha256 = "0d5npn4p321jqsbqjxkbv0ncvs2hp9vdp30np6n8n53f896cxl92"; + sha256 = "1s2y29h2q4fnbrfg2ig1cd3h7g3kdcdyrfq7znq1ndnh8xj1j489"; }; patches = [ ./fix-bitcoin-qt-build.patch ]; diff --git a/pkgs/applications/altcoins/bitcoin-unlimited.nix b/pkgs/applications/altcoins/bitcoin-unlimited.nix index d9040377ebe3..5a67dc565aa7 100644 --- a/pkgs/applications/altcoins/bitcoin-unlimited.nix +++ b/pkgs/applications/altcoins/bitcoin-unlimited.nix @@ -1,6 +1,7 @@ { stdenv, fetchFromGitHub, pkgconfig, autoreconfHook, openssl, db48, boost , zlib, miniupnpc, qt4, utillinux, protobuf, qrencode, libevent -, withGui }: +, withGui +, Foundation, ApplicationServices, AppKit }: with stdenv.lib; @@ -19,7 +20,8 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig autoreconfHook ]; buildInputs = [ openssl db48 boost zlib miniupnpc utillinux protobuf libevent ] - ++ optionals withGui [ qt4 qrencode ]; + ++ optionals withGui [ qt4 qrencode ] + ++ optionals stdenv.isDarwin [ Foundation ApplicationServices AppKit ]; patches = [ ./bitcoin-unlimited-const-comparators.patch @@ -36,7 +38,7 @@ stdenv.mkDerivation rec { completely decentralized, without the need for a central server or trusted parties. Users hold the crypto keys to their own money and transact directly with each other, with the help of a P2P network to check for double-spending. - + The Bitcoin Unlimited (BU) project seeks to provide a voice to all stakeholders in the Bitcoin ecosystem. @@ -55,7 +57,7 @@ stdenv.mkDerivation rec { If you support an increase in the blocksize limit by any means - or just support Bitcoin conflict resolution as originally envisioned by its founder - - consider running a Bitcoin Unlimited client. + consider running a Bitcoin Unlimited client. ''; homepage = https://www.bitcoinunlimited.info/; maintainers = with maintainers; [ DmitryTsygankov ]; diff --git a/pkgs/applications/altcoins/bitcoin-xt.nix b/pkgs/applications/altcoins/bitcoin-xt.nix index ccc55d17bcf6..feb2924f8651 100644 --- a/pkgs/applications/altcoins/bitcoin-xt.nix +++ b/pkgs/applications/altcoins/bitcoin-xt.nix @@ -1,6 +1,7 @@ { stdenv, fetchFromGitHub, pkgconfig, autoreconfHook, openssl, db48, boost , zlib, miniupnpc, qt4, utillinux, protobuf, qrencode, curl, libevent -, withGui }: +, withGui +, Foundation, ApplicationServices, AppKit }: with stdenv.lib; stdenv.mkDerivation rec{ @@ -18,7 +19,8 @@ stdenv.mkDerivation rec{ nativeBuildInputs = [ pkgconfig autoreconfHook ]; buildInputs = [ openssl db48 boost zlib libevent miniupnpc utillinux protobuf curl ] - ++ optionals withGui [ qt4 qrencode ]; + ++ optionals withGui [ qt4 qrencode ] + ++ optionals stdenv.isDarwin [ Foundation ApplicationServices AppKit ]; configureFlags = [ "--with-boost-libdir=${boost.out}/lib" @@ -36,7 +38,7 @@ stdenv.mkDerivation rec{ Bitcoin XT is an implementation of a Bitcoin full node, based upon the source code of Bitcoin Core. It is built by taking the latest stable Core release, applying a series of patches, and then doing deterministic - builds so anyone can check the downloads correspond to the source code. + builds so anyone can check the downloads correspond to the source code. ''; homepage = https://bitcoinxt.software/; maintainers = with maintainers; [ jefdaj ]; diff --git a/pkgs/applications/altcoins/dcrd.nix b/pkgs/applications/altcoins/dcrd.nix index 8a8c4a7f1021..cc3e83befa64 100644 --- a/pkgs/applications/altcoins/dcrd.nix +++ b/pkgs/applications/altcoins/dcrd.nix @@ -29,5 +29,6 @@ buildGoPackage rec { homepage = "https://decred.org"; description = "Decred daemon in Go (golang)"; license = with lib.licenses; [ isc ]; + broken = stdenv.isLinux; # 2018-04-10 }; } diff --git a/pkgs/applications/altcoins/dcrwallet.nix b/pkgs/applications/altcoins/dcrwallet.nix index aa6e8a0315e7..8d966684b23c 100644 --- a/pkgs/applications/altcoins/dcrwallet.nix +++ b/pkgs/applications/altcoins/dcrwallet.nix @@ -38,5 +38,6 @@ buildGoPackage rec { homepage = "https://decred.org"; description = "Decred daemon in Go (golang)"; license = with lib.licenses; [ isc ]; + broken = stdenv.isLinux; # 2018-04-10 }; } diff --git a/pkgs/applications/altcoins/default.nix b/pkgs/applications/altcoins/default.nix index d7cce586b9b7..c58178e3edbb 100644 --- a/pkgs/applications/altcoins/default.nix +++ b/pkgs/applications/altcoins/default.nix @@ -10,14 +10,26 @@ rec { bitcoin-abc = libsForQt5.callPackage ./bitcoin-abc.nix { boost = boost165; withGui = true; }; bitcoind-abc = callPackage ./bitcoin-abc.nix { boost = boost165; withGui = false; }; - bitcoin-unlimited = callPackage ./bitcoin-unlimited.nix { withGui = true; }; - bitcoind-unlimited = callPackage ./bitcoin-unlimited.nix { withGui = false; }; + bitcoin-unlimited = callPackage ./bitcoin-unlimited.nix { + inherit (darwin.apple_sdk.frameworks) Foundation ApplicationServices AppKit; + withGui = true; + }; + bitcoind-unlimited = callPackage ./bitcoin-unlimited.nix { + inherit (darwin.apple_sdk.frameworks) Foundation ApplicationServices AppKit; + withGui = false; + }; bitcoin-classic = libsForQt5.callPackage ./bitcoin-classic.nix { boost = boost165; withGui = true; }; bitcoind-classic = callPackage ./bitcoin-classic.nix { boost = boost165; withGui = false; }; - bitcoin-xt = callPackage ./bitcoin-xt.nix { boost = boost165; withGui = true; }; - bitcoind-xt = callPackage ./bitcoin-xt.nix { boost = boost165; withGui = false; }; + bitcoin-xt = callPackage ./bitcoin-xt.nix { + inherit (darwin.apple_sdk.frameworks) Foundation ApplicationServices AppKit; + boost = boost165; withGui = true; + }; + bitcoind-xt = callPackage ./bitcoin-xt.nix { + inherit (darwin.apple_sdk.frameworks) Foundation ApplicationServices AppKit; + boost = boost165; withGui = false; + }; btc1 = callPackage ./btc1.nix { boost = boost165; withGui = true; }; btc1d = callPackage ./btc1.nix { boost = boost165; withGui = false; }; @@ -51,6 +63,8 @@ rec { memorycoin = callPackage ./memorycoin.nix { boost = boost165; withGui = true; }; memorycoind = callPackage ./memorycoin.nix { boost = boost165; withGui = false; }; + mist = callPackage ./mist.nix { }; + namecoin = callPackage ./namecoin.nix { withGui = true; }; namecoind = callPackage ./namecoin.nix { withGui = false; }; diff --git a/pkgs/applications/altcoins/hevm.nix b/pkgs/applications/altcoins/hevm.nix index 51e5f6bcb298..1aa598f32545 100644 --- a/pkgs/applications/altcoins/hevm.nix +++ b/pkgs/applications/altcoins/hevm.nix @@ -55,6 +55,7 @@ lib.overrideDerivation (mkDerivation rec { description = "Ethereum virtual machine evaluator"; license = stdenv.lib.licenses.agpl3; maintainers = [stdenv.lib.maintainers.dbrock]; + broken = true; # 2018-04-10 }) (attrs: { buildInputs = attrs.buildInputs ++ [solc]; nativeBuildInputs = attrs.nativeBuildInputs ++ [makeWrapper]; diff --git a/pkgs/applications/altcoins/memorycoin.nix b/pkgs/applications/altcoins/memorycoin.nix index b9335dbabe52..944c82250d47 100644 --- a/pkgs/applications/altcoins/memorycoin.nix +++ b/pkgs/applications/altcoins/memorycoin.nix @@ -51,6 +51,6 @@ stdenv.mkDerivation rec{ homepage = http://www.bitcoin.org/; maintainers = with maintainers; [ AndersonTorres ]; license = licenses.mit; - platforms = subtractLists [ "aarch64-linux" ] platforms.unix; + platforms = [ "x86_64-linux" ]; }; } diff --git a/pkgs/applications/altcoins/mist.nix b/pkgs/applications/altcoins/mist.nix new file mode 100644 index 000000000000..c112384f3d84 --- /dev/null +++ b/pkgs/applications/altcoins/mist.nix @@ -0,0 +1,71 @@ +{ stdenv, lib, makeWrapper, fetchurl, unzip, atomEnv, makeDesktopItem, buildFHSUserEnv }: + +let + version = "0.10.0"; + name = "mist-${version}"; + + throwSystem = throw "Unsupported system: ${stdenv.system}"; + + meta = with stdenv.lib; { + description = "Browse and use Ðapps on the Ethereum network"; + homepage = https://github.com/ethereum/mist; + license = licenses.gpl3; + maintainers = with maintainers; []; + platforms = [ "x86_64-linux" "i686-linux" ]; + }; + + urlVersion = builtins.replaceStrings ["."] ["-"] version; + + desktopItem = makeDesktopItem rec { + name = "Mist"; + exec = "mist"; + icon = "mist"; + desktopName = name; + genericName = "Mist Browser"; + categories = "Network;"; + }; + + mist = stdenv.mkDerivation { + inherit name version; + + src = { + i686-linux = fetchurl { + url = "https://github.com/ethereum/mist/releases/download/v${version}/Mist-linux32-${urlVersion}.zip"; + sha256 = "01hvxlm9w522pwvsjdy18gsrapkfjr7d1jjl4bqjjysxnjaaj2lk"; + }; + x86_64-linux = fetchurl { + url = "https://github.com/ethereum/mist/releases/download/v${version}/Mist-linux64-${urlVersion}.zip"; + sha256 = "01k17j7fdfhxfd26njdsiwap0xnka2536k9ydk32czd8db7ya9zi"; + }; + }.${stdenv.system} or throwSystem; + + buildInputs = [ unzip makeWrapper ]; + + buildCommand = '' + mkdir -p $out/lib/mist $out/bin + unzip -d $out/lib/mist $src + ln -s $out/lib/mist/mist $out/bin + fixupPhase + mkdir -p $out/share/applications + ln -s ${desktopItem}/share/applications/* $out/share/applications + patchelf \ + --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \ + --set-rpath "${atomEnv.libPath}:$out/lib/mist" \ + $out/lib/mist/mist + ''; + }; +in +buildFHSUserEnv { + name = "mist"; + + targetPkgs = pkgs: with pkgs; [ + mist + ]; + + extraInstallCommands = '' + mkdir -p "$out/share/applications" + cp "${desktopItem}/share/applications/"* $out/share/applications + ''; + + runScript = "mist"; +} diff --git a/pkgs/applications/audio/asunder/default.nix b/pkgs/applications/audio/asunder/default.nix index bb0615df25b8..9c42c98ba5e3 100644 --- a/pkgs/applications/audio/asunder/default.nix +++ b/pkgs/applications/audio/asunder/default.nix @@ -12,11 +12,11 @@ with stdenv.lib; stdenv.mkDerivation rec { - version = "2.9.2"; + version = "2.9.3"; name = "asunder-${version}"; src = fetchurl { url = "http://littlesvr.ca/asunder/releases/${name}.tar.bz2"; - sha256 = "0vjbxrrjih4c673sc39wj5whp81xp9kmnwqxwzfnmhkky970rg5r"; + sha256 = "1630i1df06y840v3fgdf75jxw1s8kwbfn5bhi0686viah0scccw5"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/applications/audio/bitwig-studio/bitwig-studio2.nix b/pkgs/applications/audio/bitwig-studio/bitwig-studio2.nix index e5a5cc7c9c6a..5d9fe0edece5 100644 --- a/pkgs/applications/audio/bitwig-studio/bitwig-studio2.nix +++ b/pkgs/applications/audio/bitwig-studio/bitwig-studio2.nix @@ -3,11 +3,11 @@ bitwig-studio1.overrideAttrs (oldAttrs: rec { name = "bitwig-studio-${version}"; - version = "2.2.2"; + version = "2.3.2"; src = fetchurl { url = "https://downloads.bitwig.com/stable/${version}/bitwig-studio-${version}.deb"; - sha256 = "1x4wka32xlygmhdh9rb15s37zh5qjrgap2qk35y34c52lf5aak22"; + sha256 = "10ji4jqnnlhv4bgvhqwysprax6jcjk4759jskr9imwj6qjnj3vzn"; }; buildInputs = bitwig-studio1.buildInputs ++ [ ffmpeg ]; diff --git a/pkgs/applications/audio/cdparanoia/default.nix b/pkgs/applications/audio/cdparanoia/default.nix index d4d302f07d21..760b04bef005 100644 --- a/pkgs/applications/audio/cdparanoia/default.nix +++ b/pkgs/applications/audio/cdparanoia/default.nix @@ -17,7 +17,8 @@ stdenv.mkDerivation rec { url = "https://trac.macports.org/export/70964/trunk/dports/audio/cdparanoia/files/patch-paranoia_paranoia.c.10.4.diff"; sha256 = "17l2qhn8sh4jy6ryy5si6ll6dndcm0r537rlmk4a6a8vkn852vad"; }) - ] ++ stdenv.lib.optional stdenv.hostPlatform.isMusl ./utils.patch; + ] ++ stdenv.lib.optional stdenv.hostPlatform.isMusl ./utils.patch + ++ [./fix_private_keyword.patch]; buildInputs = stdenv.lib.optional stdenv.isAarch64 autoreconfHook; diff --git a/pkgs/applications/audio/cdparanoia/fix_private_keyword.patch b/pkgs/applications/audio/cdparanoia/fix_private_keyword.patch new file mode 100644 index 000000000000..3e9cbe2bd8c2 --- /dev/null +++ b/pkgs/applications/audio/cdparanoia/fix_private_keyword.patch @@ -0,0 +1,468 @@ +--- cdparanoia-III-10.2/interface/cdda_interface.h (revision 15337) ++++ cdparanoia-III-10.2/interface/cdda_interface.h (revision 15338) +@@ -85,5 +85,5 @@ + int is_mmc; + +- cdda_private_data_t *private; ++ cdda_private_data_t *private_data; + void *reserved; + unsigned char inqbytes[4]; +--- cdparanoia-III-10.2/interface/cooked_interface.c (revision 15337) ++++ cdparanoia-III-10.2/interface/cooked_interface.c (revision 15338) +@@ -14,11 +14,11 @@ + struct timespec tv1; + struct timespec tv2; +- int ret1=clock_gettime(d->private->clock,&tv1); ++ int ret1=clock_gettime(d->private_data->clock,&tv1); + int ret2=ioctl(fd, command,arg); +- int ret3=clock_gettime(d->private->clock,&tv2); ++ int ret3=clock_gettime(d->private_data->clock,&tv2); + if(ret1<0 || ret3<0){ +- d->private->last_milliseconds=-1; ++ d->private_data->last_milliseconds=-1; + }else{ +- d->private->last_milliseconds = (tv2.tv_sec-tv1.tv_sec)*1000. + (tv2.tv_nsec-tv1.tv_nsec)/1000000.; ++ d->private_data->last_milliseconds = (tv2.tv_sec-tv1.tv_sec)*1000. + (tv2.tv_nsec-tv1.tv_nsec)/1000000.; + } + return ret2; +--- cdparanoia-III-10.2/interface/interface.c (revision 15337) ++++ cdparanoia-III-10.2/interface/interface.c (revision 15338) +@@ -40,7 +40,7 @@ + if(d->cdda_fd!=-1)close(d->cdda_fd); + if(d->ioctl_fd!=-1 && d->ioctl_fd!=d->cdda_fd)close(d->ioctl_fd); +- if(d->private){ +- if(d->private->sg_hd)free(d->private->sg_hd); +- free(d->private); ++ if(d->private_data){ ++ if(d->private_data->sg_hd)free(d->private_data->sg_hd); ++ free(d->private_data); + } + +@@ -128,5 +128,5 @@ + } + } +- if(ms)*ms=d->private->last_milliseconds; ++ if(ms)*ms=d->private_data->last_milliseconds; + return(sectors); + } +--- cdparanoia-III-10.2/interface/scan_devices.c (revision 15337) ++++ cdparanoia-III-10.2/interface/scan_devices.c (revision 15338) +@@ -265,9 +265,9 @@ + d->bigendianp=-1; /* We don't know yet... */ + d->nsectors=-1; +- d->private=calloc(1,sizeof(*d->private)); ++ d->private_data=calloc(1,sizeof(*d->private_data)); + { + /* goddamnit */ + struct timespec tv; +- d->private->clock=(clock_gettime(CLOCK_MONOTONIC,&tv)<0?CLOCK_REALTIME:CLOCK_MONOTONIC); ++ d->private_data->clock=(clock_gettime(CLOCK_MONOTONIC,&tv)<0?CLOCK_REALTIME:CLOCK_MONOTONIC); + } + idmessage(messagedest,messages,"\t\tCDROM sensed: %s\n",description); +@@ -675,13 +675,13 @@ + d->nsectors=-1; + d->messagedest = messagedest; +- d->private=calloc(1,sizeof(*d->private)); ++ d->private_data=calloc(1,sizeof(*d->private_data)); + { + /* goddamnit */ + struct timespec tv; +- d->private->clock=(clock_gettime(CLOCK_MONOTONIC,&tv)<0?CLOCK_REALTIME:CLOCK_MONOTONIC); ++ d->private_data->clock=(clock_gettime(CLOCK_MONOTONIC,&tv)<0?CLOCK_REALTIME:CLOCK_MONOTONIC); + } + if(use_sgio){ + d->interface=SGIO_SCSI; +- d->private->sg_buffer=(unsigned char *)(d->private->sg_hd=malloc(MAX_BIG_BUFF_SIZE)); ++ d->private_data->sg_buffer=(unsigned char *)(d->private_data->sg_hd=malloc(MAX_BIG_BUFF_SIZE)); + g_fd=d->cdda_fd=dup(d->ioctl_fd); + }else{ +@@ -697,6 +697,6 @@ + + /* malloc our big buffer for scsi commands */ +- d->private->sg_hd=malloc(MAX_BIG_BUFF_SIZE); +- d->private->sg_buffer=((unsigned char *)d->private->sg_hd)+SG_OFF; ++ d->private_data->sg_hd=malloc(MAX_BIG_BUFF_SIZE); ++ d->private_data->sg_buffer=((unsigned char *)d->private_data->sg_hd)+SG_OFF; + } + +@@ -773,7 +773,7 @@ + if(g_fd!=-1)close(g_fd); + if(d){ +- if(d->private){ +- if(d->private->sg_hd)free(d->private->sg_hd); +- free(d->private); ++ if(d->private_data){ ++ if(d->private_data->sg_hd)free(d->private_data->sg_hd); ++ free(d->private_data); + } + free(d); +@@ -822,5 +822,5 @@ + d->bigendianp=-1; /* We don't know yet... */ + d->nsectors=-1; +- d->private=calloc(1,sizeof(*d->private)); ++ d->private_data=calloc(1,sizeof(*d->private_data)); + d->drive_model=copystring("File based test interface"); + idmessage(messagedest,messages,"\t\tCDROM sensed: %s\n",d->drive_model); +--- cdparanoia-III-10.2/interface/scsi_interface.c (revision 15337) ++++ cdparanoia-III-10.2/interface/scsi_interface.c (revision 15338) +@@ -16,11 +16,11 @@ + struct timespec tv1; + struct timespec tv2; +- int ret1=clock_gettime(d->private->clock,&tv1); ++ int ret1=clock_gettime(d->private_data->clock,&tv1); + int ret2=ioctl(fd, command,arg); +- int ret3=clock_gettime(d->private->clock,&tv2); ++ int ret3=clock_gettime(d->private_data->clock,&tv2); + if(ret1<0 || ret3<0){ +- d->private->last_milliseconds=-1; ++ d->private_data->last_milliseconds=-1; + }else{ +- d->private->last_milliseconds = (tv2.tv_sec-tv1.tv_sec)*1000. + (tv2.tv_nsec-tv1.tv_nsec)/1000000.; ++ d->private_data->last_milliseconds = (tv2.tv_sec-tv1.tv_sec)*1000. + (tv2.tv_nsec-tv1.tv_nsec)/1000000.; + } + return ret2; +@@ -97,5 +97,5 @@ + fd_set fdset; + struct timeval tv; +- struct sg_header *sg_hd=d->private->sg_hd; ++ struct sg_header *sg_hd=d->private_data->sg_hd; + int flag=0; + +@@ -186,5 +186,5 @@ + int tret1,tret2; + int status = 0; +- struct sg_header *sg_hd=d->private->sg_hd; ++ struct sg_header *sg_hd=d->private_data->sg_hd; + long writebytes=SG_OFF+cmd_len+in_size; + +@@ -196,5 +196,5 @@ + memset(sg_hd,0,sizeof(sg_hd)); + memset(sense_buffer,0,SG_MAX_SENSE); +- memcpy(d->private->sg_buffer,cmd,cmd_len+in_size); ++ memcpy(d->private_data->sg_buffer,cmd,cmd_len+in_size); + sg_hd->twelve_byte = cmd_len == 12; + sg_hd->result = 0; +@@ -210,5 +210,5 @@ + + if(bytecheck && out_size>in_size){ +- memset(d->private->sg_buffer+cmd_len+in_size,bytefill,out_size-in_size); ++ memset(d->private_data->sg_buffer+cmd_len+in_size,bytefill,out_size-in_size); + /* the size does not remove cmd_len due to the way the kernel + driver copies buffers */ +@@ -244,5 +244,5 @@ + + sigprocmask (SIG_BLOCK, &(d->sigset), NULL ); +- tret1=clock_gettime(d->private->clock,&tv1); ++ tret1=clock_gettime(d->private_data->clock,&tv1); + errno=0; + status = write(d->cdda_fd, sg_hd, writebytes ); +@@ -290,5 +290,5 @@ + } + +- tret2=clock_gettime(d->private->clock,&tv2); ++ tret2=clock_gettime(d->private_data->clock,&tv2); + errno=0; + status = read(d->cdda_fd, sg_hd, SG_OFF + out_size); +@@ -314,5 +314,5 @@ + long i,flag=0; + for(i=in_size;i<out_size;i++) +- if(d->private->sg_buffer[i]!=bytefill){ ++ if(d->private_data->sg_buffer[i]!=bytefill){ + flag=1; + break; +@@ -327,7 +327,7 @@ + errno=0; + if(tret1<0 || tret2<0){ +- d->private->last_milliseconds=-1; ++ d->private_data->last_milliseconds=-1; + }else{ +- d->private->last_milliseconds = (tv2.tv_sec-tv1.tv_sec)*1000 + (tv2.tv_nsec-tv1.tv_nsec)/1000000; ++ d->private_data->last_milliseconds = (tv2.tv_sec-tv1.tv_sec)*1000 + (tv2.tv_nsec-tv1.tv_nsec)/1000000; + } + return(0); +@@ -348,5 +348,5 @@ + memset(&hdr,0,sizeof(hdr)); + memset(sense,0,sizeof(sense)); +- memcpy(d->private->sg_buffer,cmd+cmd_len,in_size); ++ memcpy(d->private_data->sg_buffer,cmd+cmd_len,in_size); + + hdr.cmdp = cmd; +@@ -356,5 +356,5 @@ + hdr.timeout = 50000; + hdr.interface_id = 'S'; +- hdr.dxferp = d->private->sg_buffer; ++ hdr.dxferp = d->private_data->sg_buffer; + hdr.flags = SG_FLAG_DIRECT_IO; /* direct IO if we can get it */ + +@@ -401,5 +401,5 @@ + long i,flag=0; + for(i=in_size;i<out_size;i++) +- if(d->private->sg_buffer[i]!=bytefill){ ++ if(d->private_data->sg_buffer[i]!=bytefill){ + flag=1; + break; +@@ -413,5 +413,5 @@ + + /* Can't rely on .duration because we can't be certain kernel has HZ set to something useful */ +- /* d->private->last_milliseconds = hdr.duration; */ ++ /* d->private_data->last_milliseconds = hdr.duration; */ + + errno = 0; +@@ -446,7 +446,7 @@ + handle_scsi_cmd(d, cmd, 6, 0, 56, 0,0, sense); + +- key = d->private->sg_buffer[2] & 0xf; +- ASC = d->private->sg_buffer[12]; +- ASCQ = d->private->sg_buffer[13]; ++ key = d->private_data->sg_buffer[2] & 0xf; ++ ASC = d->private_data->sg_buffer[12]; ++ ASCQ = d->private_data->sg_buffer[13]; + + if(key == 2 && ASC == 4 && ASCQ == 1) return 0; +@@ -493,5 +493,5 @@ + + { +- unsigned char *b=d->private->sg_buffer; ++ unsigned char *b=d->private_data->sg_buffer; + if(b[0])return(1); /* Handles only up to 256 bytes */ + if(b[6])return(1); /* Handles only up to 256 bytes */ +@@ -605,6 +605,6 @@ + if(mode_sense(d,12,0x01))return(-1); + +- d->orgdens = d->private->sg_buffer[4]; +- return(d->orgsize = ((int)(d->private->sg_buffer[10])<<8)+d->private->sg_buffer[11]); ++ d->orgdens = d->private_data->sg_buffer[4]; ++ return(d->orgsize = ((int)(d->private_data->sg_buffer[10])<<8)+d->private_data->sg_buffer[11]); + } + +@@ -665,6 +665,6 @@ + } + +- first=d->private->sg_buffer[2]; +- last=d->private->sg_buffer[3]; ++ first=d->private_data->sg_buffer[2]; ++ last=d->private_data->sg_buffer[3]; + tracks=last-first+1; + +@@ -684,5 +684,5 @@ + } + { +- scsi_TOC *toc=(scsi_TOC *)(d->private->sg_buffer+4); ++ scsi_TOC *toc=(scsi_TOC *)(d->private_data->sg_buffer+4); + + d->disc_toc[i-first].bFlags=toc->bFlags; +@@ -705,5 +705,5 @@ + } + { +- scsi_TOC *toc=(scsi_TOC *)(d->private->sg_buffer+4); ++ scsi_TOC *toc=(scsi_TOC *)(d->private_data->sg_buffer+4); + + d->disc_toc[i-first].bFlags=toc->bFlags; +@@ -739,5 +739,5 @@ + + /* copy to our structure and convert start sector */ +- tracks = d->private->sg_buffer[1]; ++ tracks = d->private_data->sg_buffer[1]; + if (tracks > MAXTRK) { + cderror(d,"003: CDROM reporting illegal number of tracks\n"); +@@ -755,31 +755,31 @@ + } + +- d->disc_toc[i].bFlags = d->private->sg_buffer[10]; ++ d->disc_toc[i].bFlags = d->private_data->sg_buffer[10]; + d->disc_toc[i].bTrack = i + 1; + + d->disc_toc[i].dwStartSector= d->adjust_ssize * +- (((signed char)(d->private->sg_buffer[2])<<24) | +- (d->private->sg_buffer[3]<<16)| +- (d->private->sg_buffer[4]<<8)| +- (d->private->sg_buffer[5])); ++ (((signed char)(d->private_data->sg_buffer[2])<<24) | ++ (d->private_data->sg_buffer[3]<<16)| ++ (d->private_data->sg_buffer[4]<<8)| ++ (d->private_data->sg_buffer[5])); + } + + d->disc_toc[i].bFlags = 0; + d->disc_toc[i].bTrack = i + 1; +- memcpy (&foo, d->private->sg_buffer+2, 4); +- memcpy (&bar, d->private->sg_buffer+6, 4); ++ memcpy (&foo, d->private_data->sg_buffer+2, 4); ++ memcpy (&bar, d->private_data->sg_buffer+6, 4); + d->disc_toc[i].dwStartSector = d->adjust_ssize * (be32_to_cpu(foo) + + be32_to_cpu(bar)); + + d->disc_toc[i].dwStartSector= d->adjust_ssize * +- ((((signed char)(d->private->sg_buffer[2])<<24) | +- (d->private->sg_buffer[3]<<16)| +- (d->private->sg_buffer[4]<<8)| +- (d->private->sg_buffer[5]))+ ++ ((((signed char)(d->private_data->sg_buffer[2])<<24) | ++ (d->private_data->sg_buffer[3]<<16)| ++ (d->private_data->sg_buffer[4]<<8)| ++ (d->private_data->sg_buffer[5]))+ + +- ((((signed char)(d->private->sg_buffer[6])<<24) | +- (d->private->sg_buffer[7]<<16)| +- (d->private->sg_buffer[8]<<8)| +- (d->private->sg_buffer[9])))); ++ ((((signed char)(d->private_data->sg_buffer[6])<<24) | ++ (d->private_data->sg_buffer[7]<<16)| ++ (d->private_data->sg_buffer[8]<<8)| ++ (d->private_data->sg_buffer[9])))); + + +@@ -818,5 +818,5 @@ + if((ret=handle_scsi_cmd(d,cmd,10,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -837,5 +837,5 @@ + if((ret=handle_scsi_cmd(d,cmd,12,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -855,5 +855,5 @@ + if((ret=handle_scsi_cmd(d,cmd,10,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -873,5 +873,5 @@ + if((ret=handle_scsi_cmd(d,cmd,12,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -891,5 +891,5 @@ + if((ret=handle_scsi_cmd(d,cmd,10,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -909,5 +909,5 @@ + if((ret=handle_scsi_cmd(d,cmd,12,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -923,5 +923,5 @@ + if((ret=handle_scsi_cmd(d,cmd,12,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -937,5 +937,5 @@ + if((ret=handle_scsi_cmd(d,cmd,12,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -951,5 +951,5 @@ + if((ret=handle_scsi_cmd(d,cmd,12,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -965,5 +965,5 @@ + if((ret=handle_scsi_cmd(d,cmd,12,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -979,5 +979,5 @@ + if((ret=handle_scsi_cmd(d,cmd,12,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -993,5 +993,5 @@ + if((ret=handle_scsi_cmd(d,cmd,12,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -1027,5 +1027,5 @@ + if((ret=handle_scsi_cmd(d,cmd,12,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -1040,5 +1040,5 @@ + if((ret=handle_scsi_cmd(d,cmd,12,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -1053,5 +1053,5 @@ + if((ret=handle_scsi_cmd(d,cmd,12,0,sectors * CD_FRAMESIZE_RAW,'\177',1,sense))) + return(ret); +- if(p)memcpy(p,d->private->sg_buffer,sectors*CD_FRAMESIZE_RAW); ++ if(p)memcpy(p,d->private_data->sg_buffer,sectors*CD_FRAMESIZE_RAW); + return(0); + } +@@ -1276,5 +1276,5 @@ + long i; + for(i=2351;i>=0;i--) +- if(d->private->sg_buffer[i]!=(unsigned char)'\177') ++ if(d->private_data->sg_buffer[i]!=(unsigned char)'\177') + return(((i+3)>>2)<<2); + +@@ -1285,5 +1285,5 @@ + long i,flag=0; + for(i=0;i<2352;i++) +- if(d->private->sg_buffer[i]!=0){ ++ if(d->private_data->sg_buffer[i]!=0){ + flag=1; + break; +@@ -1622,5 +1622,5 @@ + if(mode_sense(d,22,0x2A)==0){ + +- b=d->private->sg_buffer; ++ b=d->private_data->sg_buffer; + b+=b[3]+4; + +@@ -1670,5 +1670,5 @@ + return(NULL); + } +- return (d->private->sg_buffer); ++ return (d->private_data->sg_buffer); + } + +@@ -1726,6 +1726,6 @@ + + d->error_retry=1; +- d->private->sg_hd=realloc(d->private->sg_hd,d->nsectors*CD_FRAMESIZE_RAW + SG_OFF + 128); +- d->private->sg_buffer=((unsigned char *)d->private->sg_hd)+SG_OFF; ++ d->private_data->sg_hd=realloc(d->private_data->sg_hd,d->nsectors*CD_FRAMESIZE_RAW + SG_OFF + 128); ++ d->private_data->sg_buffer=((unsigned char *)d->private_data->sg_hd)+SG_OFF; + d->report_all=1; + return(0); +--- cdparanoia-III-10.2/interface/test_interface.c (revision 15337) ++++ cdparanoia-III-10.2/interface/test_interface.c (revision 15338) +@@ -67,7 +67,7 @@ + + if(begin<lastread) +- d->private->last_milliseconds=20; ++ d->private_data->last_milliseconds=20; + else +- d->private->last_milliseconds=sectors; ++ d->private_data->last_milliseconds=sectors; + + #ifdef CDDA_TEST_UNDERRUN diff --git a/pkgs/applications/audio/clementine/default.nix b/pkgs/applications/audio/clementine/default.nix index b8ff3daec606..6379975e951c 100644 --- a/pkgs/applications/audio/clementine/default.nix +++ b/pkgs/applications/audio/clementine/default.nix @@ -70,7 +70,9 @@ let free = stdenv.mkDerivation { name = "clementine-free-${version}"; - inherit src patches nativeBuildInputs buildInputs postPatch; + inherit src patches nativeBuildInputs postPatch; + + buildInputs = buildInputs ++ [ makeWrapper ]; cmakeFlags = [ "-DUSE_SYSTEM_PROJECTM=ON" ]; @@ -78,6 +80,11 @@ let passthru.unfree = unfree; + postInstall = '' + wrapProgram $out/bin/clementine \ + --prefix GST_PLUGIN_SYSTEM_PATH_1_0 : "$GST_PLUGIN_SYSTEM_PATH_1_0" + ''; + meta = with stdenv.lib; { homepage = http://www.clementine-player.org; description = "A multiplatform music player"; @@ -108,8 +115,7 @@ let rmdir $out/bin makeWrapper ${free}/bin/clementine $out/bin/clementine \ - --set CLEMENTINE_SPOTIFYBLOB $out/libexec/clementine \ - --prefix GST_PLUGIN_SYSTEM_PATH_1_0 : "$GST_PLUGIN_SYSTEM_PATH_1_0" + --set CLEMENTINE_SPOTIFYBLOB $out/libexec/clementine mkdir -p $out/share for dir in applications icons kde4; do diff --git a/pkgs/applications/audio/dragonfly-reverb/default.nix b/pkgs/applications/audio/dragonfly-reverb/default.nix new file mode 100644 index 000000000000..b3d9fd580288 --- /dev/null +++ b/pkgs/applications/audio/dragonfly-reverb/default.nix @@ -0,0 +1,33 @@ +{ stdenv, fetchgit, libjack2, libGL, pkgconfig, xorg }: + +stdenv.mkDerivation rec { + name = "dragonfly-reverb-${src.rev}"; + + src = fetchgit { + url = "https://github.com/michaelwillis/dragonfly-reverb"; + rev = "0.9.1"; + sha256 = "1dbykx044h768bbzabdagl4jh65gqgfsxsrarjrkp07sqnhlnhpd"; + }; + + patchPhase = '' + patchShebangs dpf/utils/generate-ttl.sh + ''; + + nativeBuildInputs = [ pkgconfig ]; + buildInputs = [ + libjack2 xorg.libX11 libGL + ]; + + installPhase = '' + mkdir -p $out/lib/lv2/ + cp -a bin/DragonflyReverb.lv2/ $out/lib/lv2/ + ''; + + meta = with stdenv.lib; { + homepage = https://github.com/michaelwillis/dragonfly-reverb; + description = "A hall-style reverb based on freeverb3 algorithms"; + maintainers = [ maintainers.magnetophon ]; + license = licenses.gpl2; + platforms = ["x86_64-linux"]; + }; +} diff --git a/pkgs/applications/audio/faust/faust1.nix b/pkgs/applications/audio/faust/faust1.nix index 4875ee8b57da..bf5bb7815856 100644 --- a/pkgs/applications/audio/faust/faust1.nix +++ b/pkgs/applications/audio/faust/faust1.nix @@ -49,7 +49,7 @@ let # faust.wrapWithBuildEnv. postInstall = '' # syntax error when eval'd directly - pattern="faust2!(svg)" + pattern="faust2!(*@(atomsnippets|graph|graphviewer|md|plot|sig|sigviewer|svg))" (shopt -s extglob; rm "$out"/bin/$pattern) ''; diff --git a/pkgs/applications/audio/faust/faust2.nix b/pkgs/applications/audio/faust/faust2.nix index f0564f37d6b1..db5433cc35fc 100644 --- a/pkgs/applications/audio/faust/faust2.nix +++ b/pkgs/applications/audio/faust/faust2.nix @@ -78,7 +78,7 @@ let # faust.wrapWithBuildEnv. postInstall = '' # syntax error when eval'd directly - pattern="faust2!(svg)" + pattern="faust2!(*@(atomsnippets|graph|graphviewer|md|plot|sig|sigviewer|svg))" (shopt -s extglob; rm "$out"/bin/$pattern) ''; diff --git a/pkgs/applications/audio/flacon/default.nix b/pkgs/applications/audio/flacon/default.nix index cc453347aea4..a16593d4d1b0 100644 --- a/pkgs/applications/audio/flacon/default.nix +++ b/pkgs/applications/audio/flacon/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { name = "flacon-${version}"; - version = "4.0.0"; + version = "4.1.0"; src = fetchFromGitHub { owner = "flacon"; repo = "flacon"; rev = "v${version}"; - sha256 = "0l0xbzpy4nnr08z7gqvb4ngrjwzpspa382cbcrpkya3nd40987kr"; + sha256 = "1sw2v2w3s79lbzhkf96m8lwvag824am7rwfzzsi8bz6sa6krmj0m"; }; nativeBuildInputs = [ cmake pkgconfig makeWrapper ]; diff --git a/pkgs/applications/audio/mi2ly/default.nix b/pkgs/applications/audio/mi2ly/default.nix index fa4ea6343e91..4dfc7b13046e 100644 --- a/pkgs/applications/audio/mi2ly/default.nix +++ b/pkgs/applications/audio/mi2ly/default.nix @@ -36,5 +36,6 @@ stdenv.mkDerivation { license = stdenv.lib.licenses.gpl2Plus ; maintainers = [stdenv.lib.maintainers.raskin]; platforms = stdenv.lib.platforms.linux; + broken = true; # 2018-04-11 }; } diff --git a/pkgs/applications/audio/mopidy-gmusic/default.nix b/pkgs/applications/audio/mopidy/gmusic.nix index e58cddd42942..e58cddd42942 100644 --- a/pkgs/applications/audio/mopidy-gmusic/default.nix +++ b/pkgs/applications/audio/mopidy/gmusic.nix diff --git a/pkgs/applications/audio/mopidy-iris/default.nix b/pkgs/applications/audio/mopidy/iris.nix index 4ba0088dd04d..f3a9b73aabe5 100644 --- a/pkgs/applications/audio/mopidy-iris/default.nix +++ b/pkgs/applications/audio/mopidy/iris.nix @@ -2,11 +2,11 @@ pythonPackages.buildPythonApplication rec { pname = "Mopidy-Iris"; - version = "3.14.2"; + version = "3.17.1"; src = pythonPackages.fetchPypi { inherit pname version; - sha256 = "19affzk45wby50gwxwzqgwa7h7618lcs48ngdsa06sd66s8x2fza"; + sha256 = "02k1br077v9c5x6nn0391vh28pvn1zjbkjv8h508vy7k6ch2xjyq"; }; propagatedBuildInputs = [ @@ -17,8 +17,11 @@ pythonPackages.buildPythonApplication rec { pylast spotipy raven + tornado ]); + postPatch = "sed -i /tornado/d setup.py"; + # no tests implemented doCheck = false; diff --git a/pkgs/applications/audio/mopidy-local-images/default.nix b/pkgs/applications/audio/mopidy/local-images.nix index 063821544aed..063821544aed 100644 --- a/pkgs/applications/audio/mopidy-local-images/default.nix +++ b/pkgs/applications/audio/mopidy/local-images.nix diff --git a/pkgs/applications/audio/mopidy-local-sqlite/default.nix b/pkgs/applications/audio/mopidy/local-sqlite.nix index 7aebc43dabbb..7aebc43dabbb 100644 --- a/pkgs/applications/audio/mopidy-local-sqlite/default.nix +++ b/pkgs/applications/audio/mopidy/local-sqlite.nix diff --git a/pkgs/applications/audio/mopidy-moped/default.nix b/pkgs/applications/audio/mopidy/moped.nix index 3754bf763b20..3754bf763b20 100644 --- a/pkgs/applications/audio/mopidy-moped/default.nix +++ b/pkgs/applications/audio/mopidy/moped.nix diff --git a/pkgs/applications/audio/mopidy-mopify/default.nix b/pkgs/applications/audio/mopidy/mopify.nix index d55e711cf330..d55e711cf330 100644 --- a/pkgs/applications/audio/mopidy-mopify/default.nix +++ b/pkgs/applications/audio/mopidy/mopify.nix diff --git a/pkgs/applications/audio/mopidy-musicbox-webclient/default.nix b/pkgs/applications/audio/mopidy/musicbox-webclient.nix index d2f525bffd1d..d2f525bffd1d 100644 --- a/pkgs/applications/audio/mopidy-musicbox-webclient/default.nix +++ b/pkgs/applications/audio/mopidy/musicbox-webclient.nix diff --git a/pkgs/applications/audio/mopidy-soundcloud/default.nix b/pkgs/applications/audio/mopidy/soundcloud.nix index 098812961649..098812961649 100644 --- a/pkgs/applications/audio/mopidy-soundcloud/default.nix +++ b/pkgs/applications/audio/mopidy/soundcloud.nix diff --git a/pkgs/applications/audio/mopidy-spotify-tunigo/default.nix b/pkgs/applications/audio/mopidy/spotify-tunigo.nix index 034a07bf027d..034a07bf027d 100644 --- a/pkgs/applications/audio/mopidy-spotify-tunigo/default.nix +++ b/pkgs/applications/audio/mopidy/spotify-tunigo.nix diff --git a/pkgs/applications/audio/mopidy-spotify/default.nix b/pkgs/applications/audio/mopidy/spotify.nix index 64b5ee629b33..64b5ee629b33 100644 --- a/pkgs/applications/audio/mopidy-spotify/default.nix +++ b/pkgs/applications/audio/mopidy/spotify.nix diff --git a/pkgs/applications/audio/mopidy-youtube/default.nix b/pkgs/applications/audio/mopidy/youtube.nix index d3eb8539a19c..d3eb8539a19c 100644 --- a/pkgs/applications/audio/mopidy-youtube/default.nix +++ b/pkgs/applications/audio/mopidy/youtube.nix diff --git a/pkgs/applications/audio/qmmp/default.nix b/pkgs/applications/audio/qmmp/default.nix index 6b816cdeec10..e2218f477a59 100644 --- a/pkgs/applications/audio/qmmp/default.nix +++ b/pkgs/applications/audio/qmmp/default.nix @@ -29,11 +29,11 @@ # handle that. stdenv.mkDerivation rec { - name = "qmmp-1.2.0"; + name = "qmmp-1.2.1"; src = fetchurl { url = "http://qmmp.ylsoftware.com/files/${name}.tar.bz2"; - sha256 = "17kci7srgbkk62dgxlmg3lv2y7z04jsinpgx6jmxjpnpblpcj840"; + sha256 = "1ag8wh11dq394zjqdyz5g1srjnm4fnq4cwlhpb9k89gpmlk42cdr"; }; buildInputs = diff --git a/pkgs/applications/audio/radiotray-ng/default.nix b/pkgs/applications/audio/radiotray-ng/default.nix index 60c8f90b6d15..2ce82eb6a0a0 100644 --- a/pkgs/applications/audio/radiotray-ng/default.nix +++ b/pkgs/applications/audio/radiotray-ng/default.nix @@ -40,13 +40,13 @@ let in stdenv.mkDerivation rec { name = "radiotray-ng-${version}"; - version = "0.2.1"; + version = "0.2.2"; src = fetchFromGitHub { owner = "ebruck"; repo = "radiotray-ng"; rev = "v${version}"; - sha256 = "0hqg6vn8hv5pic96klf1d9vj8fibrgiqnqb5vwrg3wvakx0y32kr"; + sha256 = "0q8k7nsjm6m0r0zs1br60niaqlwvd3myqalb5sqijzanx41aq2l6"; }; nativeBuildInputs = [ cmake pkgconfig wrapGAppsHook makeWrapper ]; @@ -78,7 +78,8 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; - doCheck = true; + # XXX: as of 0.2.2, tries to download gmock instead of checking for provided + doCheck = false; checkPhase = "ctest"; diff --git a/pkgs/applications/audio/rhythmbox/default.nix b/pkgs/applications/audio/rhythmbox/default.nix index a23324c7fdac..8dab9e32f982 100644 --- a/pkgs/applications/audio/rhythmbox/default.nix +++ b/pkgs/applications/audio/rhythmbox/default.nix @@ -24,6 +24,15 @@ in stdenv.mkDerivation rec { sha256 = "0hzcns8gf5yb0rm4ss8jd8qzarcaplp5cylk6plwilsqfvxj4xn2"; }; + patches = [ + # build with GStreamer 1.14 https://bugzilla.gnome.org/show_bug.cgi?id=788706 + (fetchurl { + name = "fmradio-Fix-build-with-GStreamer-master.patch"; + url = https://bugzilla.gnome.org/attachment.cgi?id=361178; + sha256 = "1h09mimlglj9hcmc3pfp0d6c277mqh2khwv9fryk43pkv3904d2w"; + }) + ]; + nativeBuildInputs = [ pkgconfig intltool perl perlPackages.XMLParser diff --git a/pkgs/applications/audio/spotify/default.nix b/pkgs/applications/audio/spotify/default.nix index 7b78ceddda29..87bf440ed4f3 100644 --- a/pkgs/applications/audio/spotify/default.nix +++ b/pkgs/applications/audio/spotify/default.nix @@ -9,7 +9,7 @@ let # Latest version number can be found at: # http://repository-origin.spotify.com/pool/non-free/s/spotify-client/ # Be careful not to pick the testing version. - version = "1.0.72.117.g6bd7cc73-35"; + version = "1.0.77.338.g758ebd78-41"; deps = [ alsaLib @@ -54,7 +54,7 @@ stdenv.mkDerivation { src = fetchurl { url = "https://repository-origin.spotify.com/pool/non-free/s/spotify-client/spotify-client_${version}_amd64.deb"; - sha256 = "0yicwvg6jx8r657ff53326akq3g4ayiinlracjw5jrcs8x9whjap"; + sha256 = "1971jc0431pl8yixpl37ryl2l0pqdf0xjvkg59nqdwj3vbdx5606"; }; buildInputs = [ dpkg makeWrapper ]; diff --git a/pkgs/applications/audio/sunvox/default.nix b/pkgs/applications/audio/sunvox/default.nix index ccbceddefd2f..47b0bf2e736c 100644 --- a/pkgs/applications/audio/sunvox/default.nix +++ b/pkgs/applications/audio/sunvox/default.nix @@ -5,7 +5,7 @@ let arch = if stdenv.isAarch64 then "arm64" - else if stdenv.isArm + else if stdenv.isAarch32 then "arm_armhf_raspberry_pi" else if stdenv.is64bit then "x86_64" diff --git a/pkgs/applications/display-managers/lightdm-gtk-greeter/default.nix b/pkgs/applications/display-managers/lightdm/gtk-greeter.nix index 3227151ce21e..3227151ce21e 100644 --- a/pkgs/applications/display-managers/lightdm-gtk-greeter/default.nix +++ b/pkgs/applications/display-managers/lightdm/gtk-greeter.nix diff --git a/pkgs/applications/editors/android-studio/default.nix b/pkgs/applications/editors/android-studio/default.nix index 41f0e9914327..75385275ec84 100644 --- a/pkgs/applications/editors/android-studio/default.nix +++ b/pkgs/applications/editors/android-studio/default.nix @@ -8,14 +8,14 @@ let inherit (gnome2) GConf gnome_vfs; }; stableVersion = { - version = "3.1.1.0"; # "Android Studio 3.1.1" - build = "173.4697961"; - sha256Hash = "0xn02miq2hz7666mziza56pfqw9sjflgvn88ds7j5yd4rlcr0lq8"; + version = "3.1.2.0"; # "Android Studio 3.1.2" + build = "173.4720617"; + sha256Hash = "1h9f4pkyqxkqxampi8v035czg5d4g6lp4bsrnq5mgpwhjwkr1whk"; }; latestVersion = { - version = "3.2.0.9"; # "Android Studio 3.2 Canary 10" - build = "181.4705630"; - sha256Hash = "07xf00f0wvrk576iaqn7qpcpgar432n6q3jlgpslhm4m1cww3sww"; + version = "3.2.0.11"; # "Android Studio 3.2 Canary 12" + build = "181.4729833"; + sha256Hash = "1b976m59d230pl35ajhdic46cw8qmnykkbrg3l7am7zmih0zk64c"; }; in rec { # Old alias diff --git a/pkgs/applications/editors/atom/default.nix b/pkgs/applications/editors/atom/default.nix index 9fbf4431f602..7b989f8df1f9 100644 --- a/pkgs/applications/editors/atom/default.nix +++ b/pkgs/applications/editors/atom/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "atom-${version}"; - version = "1.25.1"; + version = "1.26.0"; src = fetchurl { url = "https://github.com/atom/atom/releases/download/v${version}/atom-amd64.deb"; - sha256 = "0h0kr4w26c6i89rb9y4aw4l8f63al42i2cy3ddk16m1irzij9fk4"; + sha256 = "1gyxys3mwwizc88vlb6j769b6r4ibjnqs6pg5iv336b13f9acyvr"; name = "${name}.deb"; }; diff --git a/pkgs/applications/editors/bonzomatic/default.nix b/pkgs/applications/editors/bonzomatic/default.nix new file mode 100644 index 000000000000..9f1db1464482 --- /dev/null +++ b/pkgs/applications/editors/bonzomatic/default.nix @@ -0,0 +1,30 @@ +{ stdenv, makeWrapper, fetchFromGitHub, cmake, alsaLib, mesa_glu, libXcursor, libXinerama, libXrandr, xorgserver }: + +stdenv.mkDerivation rec { + name = "${pname}-${version}"; + pname = "bonzomatic"; + version = "2018-03-29"; + + src = fetchFromGitHub { + owner = "Gargaj"; + repo = pname; + rev = version; + sha256 = "12mdfjvbhdqz1585772rj4cap8m4ijfci6ib62jysxjf747k41fg"; + }; + + buildInputs = [ cmake makeWrapper alsaLib mesa_glu libXcursor libXinerama libXrandr xorgserver ]; + + postFixup = '' + wrapProgram $out/bin/Bonzomatic --prefix LD_LIBRARY_PATH : "${alsaLib}/lib" + ''; + + meta = with stdenv.lib; { + description = "A live-coding tool for writing 2D fragment/pixel shaders"; + license = with licenses; [ + unlicense + unfreeRedistributable # contains libbass.so in repository + ]; + maintainers = [ maintainers.nocent ]; + platforms = [ "i686-linux" "x86_64-linux" ]; + }; +} diff --git a/pkgs/applications/editors/eclipse/plugins.nix b/pkgs/applications/editors/eclipse/plugins.nix index 1710c0e35531..136ef7dfc23d 100644 --- a/pkgs/applications/editors/eclipse/plugins.nix +++ b/pkgs/applications/editors/eclipse/plugins.nix @@ -530,18 +530,13 @@ rec { }; }; - spotbugs = buildEclipsePlugin rec { + spotbugs = buildEclipseUpdateSite rec { name = "spotbugs-${version}"; - version = "3.1.2.r201802250230-59118d9"; + version = "3.1.3"; - srcFeature = fetchurl { - url = "https://spotbugs.github.io/eclipse/features/com.github.spotbugs.plugin.eclipse_${version}.jar"; - sha256 = "1p0pz7znpfi5h1wr60sl8clkpd7rzkh7krmc0nxc6w43gkgkg9h4"; - }; - - srcPlugin = fetchurl { - url = "https://spotbugs.github.io/eclipse/plugins/com.github.spotbugs.plugin.eclipse_${version}.jar"; - sha256 = "1z3jjbcjif4qip1gx2dhfcm9fyhps96ms7z3ngbdcakgw7wai9v4"; + src = fetchzip { + url = "https://github.com/spotbugs/spotbugs/releases/download/${version}/eclipsePlugin.zip"; + sha256 = "01zrmk497bxzqgwgbpsvi5iz5qk9b4q949h4918abm54zvkgndlg"; }; meta = with stdenv.lib; { diff --git a/pkgs/applications/editors/edbrowse/default.nix b/pkgs/applications/editors/edbrowse/default.nix index a6611d2f167d..862739b4ed01 100644 --- a/pkgs/applications/editors/edbrowse/default.nix +++ b/pkgs/applications/editors/edbrowse/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { name = "edbrowse-${version}"; - version = "3.7.2"; + version = "3.7.3"; buildInputs = [ curl pcre readline openssl duktape perl html-tidy ]; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { owner = "CMB"; repo = "edbrowse"; rev = "v${version}"; - sha256 = "00wi0m91zf8p8wk4ixlz99dndgv4xqy93m2vsiwdr3khw3jwipp2"; + sha256 = "19qdxigp0qv5vyy0hpn0czcc8papvivsjrxx7p367ihizm39yzla"; }; meta = with stdenv.lib; { description = "Command Line Editor Browser"; diff --git a/pkgs/applications/editors/emacs-modes/elpa-generated.nix b/pkgs/applications/editors/emacs-modes/elpa-generated.nix index 6b05e9fe28b1..958066e21066 100644 --- a/pkgs/applications/editors/emacs-modes/elpa-generated.nix +++ b/pkgs/applications/editors/emacs-modes/elpa-generated.nix @@ -1507,10 +1507,10 @@ nhexl-mode = callPackage ({ cl-lib ? null, elpaBuild, emacs, fetchurl, lib }: elpaBuild { pname = "nhexl-mode"; - version = "0.2"; + version = "0.5"; src = fetchurl { - url = "https://elpa.gnu.org/packages/nhexl-mode-0.2.el"; - sha256 = "0qrzpkxxdwi2b3136yj5agvaxwr9g2c58kpmjmjpfhpc6yyyx5x0"; + url = "https://elpa.gnu.org/packages/nhexl-mode-0.5.el"; + sha256 = "02z2mx39m96s7v5d8sh6hxb5p70qzbagjfa3lavfw10zjim8g9wl"; }; packageRequires = [ cl-lib emacs ]; meta = { @@ -1612,10 +1612,10 @@ }) {}; org = callPackage ({ elpaBuild, fetchurl, lib }: elpaBuild { pname = "org"; - version = "9.1.9"; + version = "9.1.10"; src = fetchurl { - url = "https://elpa.gnu.org/packages/org-9.1.9.tar"; - sha256 = "16yr0srfzsrzv2b1f2wjk8gb2pyhsgj2hxbscixirkxqz674c5cl"; + url = "https://elpa.gnu.org/packages/org-9.1.10.tar"; + sha256 = "01vvq6m7r2ifyflvq5ga241qvl4j62smz0zr6jljk56b6nqi20lm"; }; packageRequires = []; meta = { diff --git a/pkgs/applications/editors/emacs-modes/icicles/default.nix b/pkgs/applications/editors/emacs-modes/icicles/default.nix index f0d120dd8030..2277ebef4ff0 100644 --- a/pkgs/applications/editors/emacs-modes/icicles/default.nix +++ b/pkgs/applications/editors/emacs-modes/icicles/default.nix @@ -2,25 +2,25 @@ let modules = [ - { name = "icicles.el"; sha256 = "10w1lghh9jqxxm5cszi2qyk24vnvazfywmyyz1v7zf6cyiwbndrz"; } - { name = "icicles-chg.el"; sha256 = "020yg4hv120mcy7qvn76j85q6hl7mfcfv66w55c6izc9lbrvvnv8"; } - { name = "icicles-cmd1.el"; sha256 = "1715x1vkiax93890gfjbzslxsn4swsv37spvyx7chy4s1mym9kfw"; } - { name = "icicles-cmd2.el"; sha256 = "187k0gmn34fn6w1dw9hjf4i788y01vk47z7ac11ar4bddwh97ddx"; } - { name = "icicles-doc1.el"; sha256 = "1bw5dkymn2xdrfrp80am0gqi0szs0xihny4qmgzgx6hfbng351qh"; } - { name = "icicles-doc2.el"; sha256 = "0zd94m1a8mwwbrbcrahxxx8q34w8cg5lna4yww4m1gliyklww86s"; } - { name = "icicles-face.el"; sha256 = "1mlz8dq7bgzp2cf5j37i25yw90ry657d2m8r93rdj67h7l4wyxhj"; } - { name = "icicles-fn.el"; sha256 = "1cdghvgsr0b7pdq4lmnfm6kwwcqbk4wqf168kf2sjajbpa24ix96"; } - { name = "icicles-mac.el"; sha256 = "1w5sgzbp8hyjzrmqd8bwivszaayzh8dkyqa0d751adiwjfs9sq9m"; } - { name = "icicles-mcmd.el"; sha256 = "1lf2galn3g52hfz61avlr4ifyn5b42dfbmyq78cpzlq7hzc928v2"; } - { name = "icicles-mode.el"; sha256 = "0gci04j6vx0vqsh4skarznklam1xibj7pjvy67kaip8b6a4zx9ip"; } - { name = "icicles-opt.el"; sha256 = "17g35ancml0mvywagzhjrgmlr4rhm1wgb5wg3fsqhhldib9qlz56"; } - { name = "icicles-var.el"; sha256 = "0ydixg41h09yncp8g2nv8zsyv8avg1hj2f3mgrmd2kf0n27bw2nv"; } + { name = "icicles.el"; sha256 = "0wxak7wh0rrb3h77ay2vypbb53skcfbrv71xkajhax0w12q6zpaj"; } + { name = "icicles-chg.el"; sha256 = "1kqlhisg5g9ycylzqiwxrmmgfw2jw599wisz26wvi48lac2icgg7"; } + { name = "icicles-cmd1.el"; sha256 = "17cpw798bl6p77cmjl7lwdnxa1qpw4z1wacjq2mdc8fh81cyw3am"; } + { name = "icicles-cmd2.el"; sha256 = "15swxk7fr7wsqpf26xzbvyk12ikkvfcyh9w8wmnpc38dmpyq79rb"; } + { name = "icicles-doc1.el"; sha256 = "04j5qvj7pqnjh8h2y2sdgi7x55czdp9xn7yysr3bzcmr1rq5p4bz"; } + { name = "icicles-doc2.el"; sha256 = "1k8vfhi3fa4bzsxr074bw5q6srvq6z6hi61rzlxdw7pah6qf7hcz"; } + { name = "icicles-face.el"; sha256 = "1pvygqzmh6ag0zhfjn1vhdvlhxybwxzj22ah2pc0ls80dlywhi4l"; } + { name = "icicles-fn.el"; sha256 = "1sn56z5rjsvqsy3vs7af7yai0c0qdjvcxvwwc59rhswrbi6zlxz5"; } + { name = "icicles-mac.el"; sha256 = "1wyvqzlpq5n70mggqijb8f5r5q9y1hxxngp64sixy0xszy5d12dk"; } + { name = "icicles-mcmd.el"; sha256 = "05dniz6337v9r15w8r2zad0n2h6jlygzjp7vw75vvq8mds0acmia"; } + { name = "icicles-mode.el"; sha256 = "1xfv8nryf5y2gygg02naawzm5qhrkba3h84g43518r1xc6rgbpp6"; } + { name = "icicles-opt.el"; sha256 = "10n4p999ylkapirs75y5fh33lpiyx42i3ajzl2zjfwyr1zksg1iz"; } + { name = "icicles-var.el"; sha256 = "1r5gb01zg8nf2qryq9saxfpnzlymmppsk7w1g09lac35c87vh8yl"; } ]; forAll = f: map f modules; in stdenv.mkDerivation rec { - version = "2017-10-28"; + version = "2018-04-16"; name = "icicles-${version}"; srcs = forAll ({name, sha256}: fetchurl { url = "http://www.emacswiki.org/emacs/download/${name}"; inherit sha256; }); diff --git a/pkgs/applications/editors/emacs-modes/melpa-generated.nix b/pkgs/applications/editors/emacs-modes/melpa-generated.nix index 8fb655507d0a..aec089f43dee 100644 --- a/pkgs/applications/editors/emacs-modes/melpa-generated.nix +++ b/pkgs/applications/editors/emacs-modes/melpa-generated.nix @@ -761,8 +761,8 @@ src = fetchFromGitHub { owner = "Andersbakken"; repo = "rtags"; - rev = "a595d13f60c13d67a28467b3941d5ed558102e91"; - sha256 = "0yp6h6nsbji7dmc9pnf9qi7zsqxrxa1bln90bn0y71xf6z11kbp4"; + rev = "4747d5b695bee40c3b0a2e3591ac8897571edd66"; + sha256 = "1qy71bx8nki73mqslw54hq5bn1asz5qg1b2848nrsj8zb2yd85x5"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/ac-rtags"; @@ -1426,12 +1426,12 @@ airline-themes = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, powerline }: melpaBuild { pname = "airline-themes"; - version = "20170623.958"; + version = "20180410.2106"; src = fetchFromGitHub { owner = "AnthonyDiGirolamo"; repo = "airline-themes"; - rev = "0c0f8efbeaefa49ef04c0c4405b1ef79ecc5433e"; - sha256 = "08hkx5wf9qyh4d5s5z4v57d43qkzw6p8zsqijw92wy4kngv1gl78"; + rev = "8b528fbae0e557461315bed82883275d58df41f2"; + sha256 = "1xydgf9w0i2anpmjhy8m0zv1hql4gb37i11xfn6xzwna572z1ml9"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/addeb923176132a52807308fa5e71d41c9511802/recipes/airline-themes"; @@ -3807,12 +3807,12 @@ avy = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "avy"; - version = "20180322.1333"; + version = "20180415.1259"; src = fetchFromGitHub { owner = "abo-abo"; repo = "avy"; - rev = "2d613eb050d94c1cdfb403da7446883ce6d35baa"; - sha256 = "1dmn94bigw5xnxbwmrlyj810iqjgcvqp3qlsgszj6cbg2pv75sqf"; + rev = "08370cdbc35ff41646461a02d6d9758dfce30c20"; + sha256 = "08pgyj3mab6iqbb029wixvvjfc634iln0ij6lxnvpvgy4298iw9k"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/77fac7a702d4086fb860514e377037acedc60412/recipes/avy"; @@ -4567,12 +4567,12 @@ beeminder = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, org }: melpaBuild { pname = "beeminder"; - version = "20160209.1903"; + version = "20180413.1229"; src = fetchFromGitHub { owner = "Sodaware"; repo = "beeminder.el"; - rev = "a4e159250bac89bc25ced8523a5eac2a951cd5b6"; - sha256 = "0ki9q3ylssjabh15dr49k7dxv88snpj4564g0myp3c61qzyy82lk"; + rev = "3fcee7a7003a37171ddb59171c7f4b5dd4b34349"; + sha256 = "0phiyv4n5y052fgxngl3yy74akb378sr6manx21s360gnxzcblwd"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7fabdb05de9b8ec18a3a566f99688b50443b6b44/recipes/beeminder"; @@ -6712,8 +6712,8 @@ src = fetchFromGitHub { owner = "ocaml"; repo = "ocaml"; - rev = "4609ceb9d69ac274b447eadf7b70599f7426a97c"; - sha256 = "05frlvxf4dz27d50h6jdgbkfdz1g3lgy1nx2n0ci1sp9yi5n3gm0"; + rev = "fe9a5215948b3636161262b275eca8b98ff1967b"; + sha256 = "1nkqrbx86j2mj0jsap12jfihpw5lnrsxy711qn4g8n3abng4lnza"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d5a3263cdcc229b11a3e96edbf632d56f32c47aa/recipes/caml"; @@ -7215,8 +7215,8 @@ src = fetchFromGitHub { owner = "cfengine"; repo = "core"; - rev = "94d364a917682a7331c6543bf551a6541b848cf2"; - sha256 = "12fynh61l7aza3p4r9ag04r912lzh5pspn4rsacvlsz0ypgk325v"; + rev = "bb460ccf2348873b7a84e99930feb038d0f9a95b"; + sha256 = "1wgf2lpcpplxdabz0xbzq9j5va5zhxl22ns63d4jj7v86a77cg2y"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c737839aeda583e61257ad40157e24df7f918b0f/recipes/cfengine-code-style"; @@ -7820,12 +7820,12 @@ cider = callPackage ({ clojure-mode, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, pkg-info, queue, seq, spinner }: melpaBuild { pname = "cider"; - version = "20180402.2126"; + version = "20180413.51"; src = fetchFromGitHub { owner = "clojure-emacs"; repo = "cider"; - rev = "918789346ec9b06991050e5be13e70641b6add47"; - sha256 = "0z9d4ijky0pcqvdkqi9xmcl8zzvr8j0s6zbrkg934mnjhqgp6jc0"; + rev = "a01115242ba839465e16892383133c21c350d5bd"; + sha256 = "1b0p7dnrcgnjma4yk6fc3v21sxaz772wrc780sd5faa833z8wg16"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/55a937aed818dbe41530037da315f705205f189b/recipes/cider"; @@ -8324,12 +8324,12 @@ clj-refactor = callPackage ({ cider, clojure-mode, edn, emacs, fetchFromGitHub, fetchurl, hydra, inflections, lib, melpaBuild, multiple-cursors, paredit, s, seq, yasnippet }: melpaBuild { pname = "clj-refactor"; - version = "20180406.633"; + version = "20180411.43"; src = fetchFromGitHub { owner = "clojure-emacs"; repo = "clj-refactor.el"; - rev = "ab081b26b92f6a1c7ebe8fb7ff9803d46b07ae84"; - sha256 = "0srp9xxln9hai1pdvc53jixridzrrz6i6xsn3f96knr46abhhdp0"; + rev = "adffc6a4c61a9555744634598b47631760e91488"; + sha256 = "19bi7pnsyqaahwsy6gr55k8kgjfimrjn3lriyzjh7jkhfsmm77bn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3a2db268e55d10f7d1d5a5f02d35b2c27b12b78e/recipes/clj-refactor"; @@ -8735,12 +8735,12 @@ cmake-ide = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, levenshtein, lib, melpaBuild, s, seq }: melpaBuild { pname = "cmake-ide"; - version = "20180408.1140"; + version = "20180413.329"; src = fetchFromGitHub { owner = "atilaneves"; repo = "cmake-ide"; - rev = "a584f5397df72b565a63ec53b26e93aa07e14773"; - sha256 = "0hrala1rjn9n7my56la6vd06hzdsq4ccnrlajnir6h60r4k7fvj4"; + rev = "3d4da16226e8d4e53613feeebb5e21e6a7defed5"; + sha256 = "1d0nxqhx6ssld92wlv8c40m655zpf622a0ns4v78397nfm135khq"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/17e8a8a5205d222950dc8e9245549a48894b864a/recipes/cmake-ide"; @@ -8760,8 +8760,8 @@ src = fetchFromGitHub { owner = "Kitware"; repo = "CMake"; - rev = "7eecf8ca50247faefe4f854aa075331f9d2dbe15"; - sha256 = "17xx5hgv2zk96i1v4r5hy9dgbbzyx7z38rk7jhzqa47g6bmxgvjy"; + rev = "ccd17a557cbf8ada18207a72eea78d2adcc9d752"; + sha256 = "1i85zb5j3ckn5b9xybczf6k42vpwsyq3xyzzarq3w775iyjlnkfj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/598723893ae4bc2e60f527a072efe6ed9d4e2488/recipes/cmake-mode"; @@ -9533,12 +9533,12 @@ company = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "company"; - version = "20180329.1441"; + version = "20180415.2135"; src = fetchFromGitHub { owner = "company-mode"; repo = "company-mode"; - rev = "ddfdcb78c1f7abc25e1a2db1eb68721b20d00a95"; - sha256 = "0s0yqafd1awavlv52gzzi01mwfyjdb24iqi9jw53hw01s5823wmg"; + rev = "46680da66a3ba70c7b2371832f8b8d9734dec554"; + sha256 = "03q76dvjka0xw91gzin848virwpm9dv71y3y2p3m168y7chk4g7s"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/96e7b4184497d0d0db532947f2801398b72432e4/recipes/company"; @@ -9687,16 +9687,16 @@ company-box = callPackage ({ company, dash, dash-functional, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "company-box"; - version = "20180410.334"; + version = "20180413.1651"; src = fetchFromGitHub { owner = "sebastiencs"; repo = "company-box"; - rev = "1b8399075f64ccefd61bd974c2735641817da4ca"; - sha256 = "0aw33q7qscn0vkpii7ipl9pn6gw2ii3rsh303x2igwm9yav0v92l"; + rev = "a27b632c1bb92de3415cea08c7885f3dc9ce30eb"; + sha256 = "1p71yalry5linxdb5xiyig8wlb9nw0c5nmlkdxc1l0gyhr8lrzci"; }; recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/fa432efc9be5e3ae8f91154a6718cdbd100bab6f/recipes/company-box"; - sha256 = "1kn4xv17rwmw31466lvjhb1hhfxsslnm4227n82s70lyswcjrinh"; + url = "https://raw.githubusercontent.com/milkypostman/melpa/a54879f4dd4dcb6867680567731547d604ad02bb/recipes/company-box"; + sha256 = "0v39gja3jp8b2xfn9da93xsh8mihizwbg0gqp2yyczaxjm8ga23i"; name = "company-box"; }; packageRequires = [ company dash dash-functional emacs ]; @@ -10460,8 +10460,8 @@ src = fetchFromGitHub { owner = "Andersbakken"; repo = "rtags"; - rev = "a595d13f60c13d67a28467b3941d5ed558102e91"; - sha256 = "0yp6h6nsbji7dmc9pnf9qi7zsqxrxa1bln90bn0y71xf6z11kbp4"; + rev = "4747d5b695bee40c3b0a2e3591ac8897571edd66"; + sha256 = "1qy71bx8nki73mqslw54hq5bn1asz5qg1b2848nrsj8zb2yd85x5"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/company-rtags"; @@ -10729,12 +10729,12 @@ composer = callPackage ({ emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, php-runtime, request, s, seq }: melpaBuild { pname = "composer"; - version = "20180111.942"; + version = "20180415.743"; src = fetchFromGitHub { owner = "emacs-php"; repo = "composer.el"; - rev = "e34ebe795d267e28965c85bd84cbb16b18165bd8"; - sha256 = "1vqjraldl2an10q1w91l7rx66mpsvqvjgg3j1k7xcvw07570aabl"; + rev = "1d43edd8079e84df5e1b46c65e6783cb3ff9debd"; + sha256 = "0k6345mc2ppckbbmji4wkynlfgy00kr945ah8j2b62hqgm73h575"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/eb13cb0dba1696cc51132cd1ff723fa17f892a7c/recipes/composer"; @@ -11149,12 +11149,12 @@ counsel = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, swiper }: melpaBuild { pname = "counsel"; - version = "20180409.1120"; + version = "20180415.905"; src = fetchFromGitHub { owner = "abo-abo"; repo = "swiper"; - rev = "9c3c3822b0786ee517d9f0afdaa82245e1d1b02b"; - sha256 = "1k4lzy0a0n501d8b7y0hvz7svn894ch2nrjf6fkdgyj2dgd9bj7q"; + rev = "1181d0f7acb9e77a15fa7e62cb1027979185c853"; + sha256 = "0vsl346axdlkcv96cxlciw7bmvxwl2ficjgw9nxrsvhsjsy7md02"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/06c50f32b8d603db0d70e77907e36862cd66b811/recipes/counsel"; @@ -11419,22 +11419,22 @@ license = lib.licenses.free; }; }) {}; - cov = callPackage ({ emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: + cov = callPackage ({ elquery, emacs, f, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "cov"; - version = "20180407.1546"; + version = "20180415.1331"; src = fetchFromGitHub { owner = "AdamNiederer"; repo = "cov"; - rev = "222d3e51f86a76a976872ff2a2bc6d3188f4ff96"; - sha256 = "1r8igz8gcb5vb4mpvlnkgzbpzc86xx5cqy9kb3dzbgvd9pn6h2lq"; + rev = "e6731ddf16be343a24449cf7dca92f382c8a831b"; + sha256 = "09p61ni7vkwl679ysl9aibw0b7qi5v9vpgvg08vj00fp5a82rzsq"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d0f35ce436ac157955d6f92de96e14bef9ad69e3/recipes/cov"; sha256 = "02wk8ikanl5lcwqb9wqc8xx5vwzhn2hpqpxdchg5mdi7fifa1rni"; name = "cov"; }; - packageRequires = [ emacs f s ]; + packageRequires = [ elquery emacs f s ]; meta = { homepage = "https://melpa.org/#/cov"; license = lib.licenses.free; @@ -11569,12 +11569,12 @@ cquery = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, lsp-mode, melpaBuild }: melpaBuild { pname = "cquery"; - version = "20180319.2313"; + version = "20180413.938"; src = fetchFromGitHub { owner = "cquery-project"; repo = "emacs-cquery"; - rev = "383656d3cb368481594fd7a13d0395a8640afbac"; - sha256 = "1qdicqwafnhfqkl3ihvc67w4wnhyp089wbf54v1plrcw75ywdlmf"; + rev = "7f48de485c5f4ca0d55b93307763889ce2d7c5c4"; + sha256 = "1cb41f0can8mslg80v1np5wvq9c0vl0px5mgy0zyzhajf9zqszgn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3cd3bffff0d2564c39735f844f9a02a660272caa/recipes/cquery"; @@ -12329,8 +12329,8 @@ src = fetchFromGitHub { owner = "cython"; repo = "cython"; - rev = "73e83c248c0055e85c5d517aaf01db3f63560b53"; - sha256 = "07hgqcy5zcvmwbvbpsggyj59lgqkq7fbiqsyk237dpgbprjmhncw"; + rev = "29961acc1c64710127a5191af6c039cb1fa22203"; + sha256 = "00qwi8frmhas5qgs9i8hx067d60zpycnw3pbd4xgn9nis8fjjnw6"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/be9bfabe3f79153cb859efc7c3051db244a63879/recipes/cython-mode"; @@ -12514,12 +12514,12 @@ dante = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, flycheck, haskell-mode, lcr, lib, melpaBuild, s }: melpaBuild { pname = "dante"; - version = "20180224.1246"; + version = "20180414.1306"; src = fetchFromGitHub { owner = "jyp"; repo = "dante"; - rev = "33c8c4afac616e6de30111f8a7f11d572496a838"; - sha256 = "0zv6vqzw299ydgwxiky8b2nlb8cyzzw9zsx44ixaqqf73f63bv1n"; + rev = "18a2c4a833f9ece01ccfb5910455fc2f0b0de986"; + sha256 = "09a8gwnh2281kjc1rk6ba5clk020hmz11pz36iy99y1bya043794"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/5afa8226077cbda4b76f52734cf8e0b745ab88e8/recipes/dante"; @@ -12745,12 +12745,12 @@ dash = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "dash"; - version = "20180310.1317"; + version = "20180413.30"; src = fetchFromGitHub { owner = "magnars"; repo = "dash.el"; - rev = "87d5feac1a08ea09e55e52442dc5e497817b4f08"; - sha256 = "05rm9rs4083ccsscwi7kl094ij5lz7hgs9kvxdsrjmvxj4fqdqm7"; + rev = "a74f4cfcdc8d0642a9f602ad494f0354f27dacc9"; + sha256 = "1kzijmjxjxgr7p8clphzvmm47vczckbs8mza9an77c25bn627ywl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/57eed8767c3e98614259c408dc0b5c54d3473883/recipes/dash"; @@ -12791,8 +12791,8 @@ src = fetchFromGitHub { owner = "magnars"; repo = "dash.el"; - rev = "87d5feac1a08ea09e55e52442dc5e497817b4f08"; - sha256 = "05rm9rs4083ccsscwi7kl094ij5lz7hgs9kvxdsrjmvxj4fqdqm7"; + rev = "a74f4cfcdc8d0642a9f602ad494f0354f27dacc9"; + sha256 = "1kzijmjxjxgr7p8clphzvmm47vczckbs8mza9an77c25bn627ywl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/57eed8767c3e98614259c408dc0b5c54d3473883/recipes/dash-functional"; @@ -15032,12 +15032,12 @@ docker = callPackage ({ dash, docker-tramp, emacs, fetchFromGitHub, fetchurl, json-mode, lib, magit-popup, melpaBuild, s, tablist }: melpaBuild { pname = "docker"; - version = "20180405.2353"; + version = "20180416.911"; src = fetchFromGitHub { owner = "Silex"; repo = "docker.el"; - rev = "551ae639d84711acb705939a5b90f25bc01b5838"; - sha256 = "1748j4w9nzbw70vq5q2261fphpnz4a64hl1yn1yswa5rcm325i0p"; + rev = "6df5799e358cfd8714bf9aff8368865a5bcf9691"; + sha256 = "091p9wvrnhz42azg9g9ybc08s4gf1fxwjzxc3ar530wc56kdmd7p"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/6c74bf8a41c17bc733636f9e7c05f3858d17936b/recipes/docker"; @@ -15418,12 +15418,12 @@ dracula-theme = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "dracula-theme"; - version = "20170412.845"; + version = "20180416.652"; src = fetchFromGitHub { owner = "dracula"; repo = "emacs"; - rev = "62df5de68c73d34faaa0191a92ce3ebce589bf24"; - sha256 = "0wpbscqaszr2mg0hijamcz6l9nknsi12mwdbib16ghlh6y9mj4ia"; + rev = "74094e6fd5d0f15b92d82c73b3b3d9f13949d5dd"; + sha256 = "0apimfivs0g4m9qy1m3c8id6ycr2lwxdpd00crxbka284g440nzj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d63cb8906726f106e65f7d9895b49a38ffebf8d5/recipes/dracula-theme"; @@ -16173,12 +16173,12 @@ easy-hugo = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, popup }: melpaBuild { pname = "easy-hugo"; - version = "20180403.439"; + version = "20180416.749"; src = fetchFromGitHub { owner = "masasam"; repo = "emacs-easy-hugo"; - rev = "97733f78e034fd955df7871c1cf92627e329a0ea"; - sha256 = "10y5h8mj4c81mlyna801wc6ygxyix41d0hzlvvs9pja34i5zljmh"; + rev = "b01585991ca1885e9cf10dc41481116feb091c89"; + sha256 = "1nac2al4hi4lcarj325957jgkkfgfkgpw6mzmbcqzqvy02r2v7g4"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/easy-hugo"; @@ -16194,12 +16194,12 @@ easy-jekyll = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "easy-jekyll"; - version = "20180402.9"; + version = "20180416.811"; src = fetchFromGitHub { owner = "masasam"; repo = "emacs-easy-jekyll"; - rev = "742366a2eb8bdb3d91e108e701ca8a1e83084671"; - sha256 = "1i3pxg5mskbk2zmcavbd78sr9l45qqcjjfp3p0i8q5kbm9zjr5fm"; + rev = "670c289d7dabc9e991ba78cdde17fb659f23eb50"; + sha256 = "1myqhny6v5xdz55xi1ayfash5r3ihkyy2cykwhjkrpp339695bxf"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c3f281145bad12c27bdbef32ccc07b6a5f13b577/recipes/easy-jekyll"; @@ -16320,12 +16320,12 @@ ebib = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, parsebib, seq }: melpaBuild { pname = "ebib"; - version = "20180213.531"; + version = "20180416.350"; src = fetchFromGitHub { owner = "joostkremers"; repo = "ebib"; - rev = "cbad0a51d7905712201d83e9f4f52a7bb047652f"; - sha256 = "1jmg63q4msy83nr0xzivay9n8nv48kawqj5jxlfq83fwkvnk1szm"; + rev = "22709d2b5e973b321dc8412f9a26acb156a076e1"; + sha256 = "1xh7gmshn1ra027pqbvc06qxjs49ijby0kiz37qdqz7rvq2xgl6n"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4e39cd8e8b4f61c04fa967def6a653bb22f45f5b/recipes/ebib"; @@ -16983,8 +16983,8 @@ src = fetchFromGitHub { owner = "egisatoshi"; repo = "egison3"; - rev = "1a95b2b6709842e6586594c08337c1e7237a9eed"; - sha256 = "0cd495wvnys6jj6s7k67mgwbrmc8203yya4j0xixhpffhq1m2km3"; + rev = "2f8f744bd0a8d1c307922c6636f1c337d45a55bc"; + sha256 = "1ds0fxi12z3cls0wavyq5anw2jfhmc2a6mx3g4mnxfr39sjr4q2r"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f543dd136e2af6c36b12073ea75b3c4d4bc79769/recipes/egison-mode"; @@ -17061,12 +17061,12 @@ ein = callPackage ({ auto-complete, cl-generic, dash, deferred, fetchFromGitHub, fetchurl, lib, melpaBuild, request, request-deferred, s, skewer-mode, websocket }: melpaBuild { pname = "ein"; - version = "20180404.1847"; + version = "20180414.1838"; src = fetchFromGitHub { owner = "millejoh"; repo = "emacs-ipython-notebook"; - rev = "94d7c7820da3e22791707b2fe797941646a7c610"; - sha256 = "01mybxcfm34hxwkmh6wms8s4vidfny2s052786g1jlq3ny1g9afd"; + rev = "ed4ae8006ca58c39c5e09925fb51c0f3529cb199"; + sha256 = "0clww9329ysipdby8d3qwkx7pmrls075j0kpsqw3h8mm9hb48wgj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/215e163755fe391ce1f049622e7b9bf9a8aea95a/recipes/ein"; @@ -17491,12 +17491,12 @@ elcord = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "elcord"; - version = "20180306.1515"; + version = "20180411.1207"; src = fetchFromGitHub { owner = "Mstrodl"; repo = "elcord"; - rev = "3071250488613d8dbd79daf81ddbe3bad4b87001"; - sha256 = "0lcs0713r4vcln2im53mkfwcibr3j7ygs467rfgf163kd979gp5c"; + rev = "0cef4ca13b00d79507292d5591be8ffb7df5a9ca"; + sha256 = "1571r8iwrf4dagjr2pv7dgs1i0f20nq6jdkxm2dlwvkblcnlx3fm"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/cf2c52366a8f60b68a33a40ea92cc96e7f0933d2/recipes/elcord"; @@ -18254,12 +18254,12 @@ elpy = callPackage ({ company, emacs, fetchFromGitHub, fetchurl, find-file-in-project, highlight-indentation, lib, melpaBuild, pyvenv, s, yasnippet }: melpaBuild { pname = "elpy"; - version = "20180406.217"; + version = "20180415.1232"; src = fetchFromGitHub { owner = "jorgenschaefer"; repo = "elpy"; - rev = "e3028393e6cf744ec902120e37bd92e0f32ea4ef"; - sha256 = "1fd4zj4sqnipbwjybbp1rk65g60n8w20xg3if9nhky47nwwjanyx"; + rev = "911d1c58df1c0ff9ce8057d07b13c06759f2e0e4"; + sha256 = "0cyk2467gcxz0vf63p0db9y6rij9hb7251lv6s054mzy3kbcn7zm"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1d8fcd8745bb15402c9f3b6f4573ea151415237a/recipes/elpy"; @@ -18871,11 +18871,11 @@ emms = callPackage ({ cl-lib ? null, fetchgit, fetchurl, lib, melpaBuild }: melpaBuild { pname = "emms"; - version = "20180409.2121"; + version = "20180412.639"; src = fetchgit { url = "https://git.savannah.gnu.org/git/emms.git"; - rev = "c90a7535ff1e6552274adf3a48b777316ff8d897"; - sha256 = "0yvp0l2l3h9h879fxjml3nyg7swq47xdwk4hiigqk4fx7cxi9rs0"; + rev = "9b7b50a89bc4f9df7f9edd6e939508288f0ffa9b"; + sha256 = "0v271gk6q77zs0gdp9asbqd8alrn6ifxzzjkqb3hd4xdafv35sf3"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/caaa21f235c4864f6008fb454d0a970a2fd22a86/recipes/emms"; @@ -18975,12 +18975,12 @@ emms-player-mpv = callPackage ({ emms, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "emms-player-mpv"; - version = "20180409.1503"; + version = "20180415.1958"; src = fetchFromGitHub { owner = "dochang"; repo = "emms-player-mpv"; - rev = "ccc0090ba1ebaad6bd3b079d6d810e9a051218b3"; - sha256 = "1jy7zc26ypwl46ag26gbspbn7p4lf3jxgb34l8blqzk8qn8fxz0c"; + rev = "c7efefd0b41fa910436a91eb3bca4db3a85ad940"; + sha256 = "0h40nhrzndzhdq3ra8bzqg3gczbmjf010n0nan6dril427qvxdjw"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9679cb8d4b3b9dce1e0bff16647ea3f3e02c4189/recipes/emms-player-mpv"; @@ -19708,12 +19708,12 @@ erc-hl-nicks = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "erc-hl-nicks"; - version = "20160202.1150"; + version = "20180415.1246"; src = fetchFromGitHub { owner = "leathekd"; repo = "erc-hl-nicks"; - rev = "be181920ce6af0ab5d00d1c638e4e598b3998643"; - sha256 = "1k0g3bwp3w0dd6zwdv6k2wpqs2krjayilrzsr1hli649ljcx55d7"; + rev = "756c4438a8245ccd3e389bf6c9850ee8453783ec"; + sha256 = "0c82rxpl5v7bbxirf1ksg06xv5xcddh8nkrpj7i6nvfarwdfnk4f"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/erc-hl-nicks"; @@ -20090,8 +20090,8 @@ src = fetchFromGitHub { owner = "erlang"; repo = "otp"; - rev = "6a38655668542cebb60d5e13078b599abb3f0ec6"; - sha256 = "11ramwyy6qhqc0a6dq1n4kqzcx9r5fgshxak6d632z2f5pw504dq"; + rev = "40dc6b9fed7d51a204e0d69b7bba7e8cb6496ae5"; + sha256 = "1ndzx4alfwc437d4j0bifgc0pignxs0nvwp4i2fdrpljcf0x0nxa"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d9cd526f43981e0826af59cdc4bb702f644781d9/recipes/erlang"; @@ -20107,12 +20107,12 @@ eros = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "eros"; - version = "20161221.826"; + version = "20180414.2318"; src = fetchFromGitHub { owner = "xiongtx"; repo = "eros"; - rev = "a42e45c9b2397156c684330b0fc90ee0eba773f5"; - sha256 = "0whlsq90v13fz69k3wjrwcwb9gkpfxqjd75mg3nrp85j9nwhb5i4"; + rev = "dd8910279226259e100dab798b073a52f9b4233a"; + sha256 = "08chj3a0lw4ygi2sv7wj0i6ihfbi8jhylr8p92inif8b88r6wg3k"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/eros"; @@ -20170,11 +20170,11 @@ ert-junit = callPackage ({ ert ? null, fetchgit, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ert-junit"; - version = "20180406.150"; + version = "20180407.1243"; src = fetchgit { url = "https://bitbucket.org/olanilsson/ert-junit"; - rev = "fdf3ba7bf9f12281f1dccdae4d12449605ae4aec"; - sha256 = "0jsg4a9bf70kvpjjgs0rgdzqvwmlip91cpbhw14c2gaza48d36lf"; + rev = "8d7d703332e3a41bfc59de44fa8832435ff1633b"; + sha256 = "1mbbv18pviirf220wjzfjlig8i3jwcl1bpv5awzvyzg2lm3h1nbc"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/27c627eacab54896a1363dbabc56250a65343dd8/recipes/ert-junit"; @@ -20694,12 +20694,12 @@ ess = callPackage ({ fetchFromGitHub, fetchurl, julia-mode, lib, melpaBuild }: melpaBuild { pname = "ess"; - version = "20180410.447"; + version = "20180416.631"; src = fetchFromGitHub { owner = "emacs-ess"; repo = "ESS"; - rev = "9da8612e3b3e382916d6e36a99fbbb097f4bedf5"; - sha256 = "1rkmvdl9hxvhm2q30vgn4bnifdz7kff3brkf393229b2n8k9rjws"; + rev = "27b55440d15ff532da86dfae6d030e76d1e6d518"; + sha256 = "1sjnky11lhmiqcqrmdfi8xaf40jlm43kzbnviq031apwfxrvifi5"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/12997b9e2407d782b3d2fcd2843f7c8b22442c0a/recipes/ess"; @@ -21198,12 +21198,12 @@ evil-collection = callPackage ({ cl-lib ? null, emacs, evil, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "evil-collection"; - version = "20180409.2045"; + version = "20180416.146"; src = fetchFromGitHub { owner = "emacs-evil"; repo = "evil-collection"; - rev = "7afd9e5cfcdd68da738b6d812dab2ba394eec68f"; - sha256 = "0iaab4n4n53gqrn5rjrzcb1jq4zvhp95whl207xvddhf1b48dlvz"; + rev = "aca031a7f313d4380a1dbaa2158a9908a2ce9415"; + sha256 = "1mzgi8bdd767g6xfkznpm5v8gjx8wp99drlxggi0vgp1rm3zslsz"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a9b93a8e3750e4e7767498e418f46d553d814604/recipes/evil-collection"; @@ -21450,12 +21450,12 @@ evil-goggles = callPackage ({ emacs, evil, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "evil-goggles"; - version = "20180210.938"; + version = "20180414.2306"; src = fetchFromGitHub { owner = "edkolev"; repo = "evil-goggles"; - rev = "deab4966d75321a9172947ee5cdf2329eb2c5a6b"; - sha256 = "1b4w40x23kbzry80d4rxxynasmrkbry9jj5jkc4l4rcj8lk3vbbi"; + rev = "bc318ad4b7711837c21405d49a0ce4097f3a70a9"; + sha256 = "0vy6skhp6skr3hvkc0dzfn1dridwzybjm9mg2h90srvg76c8966p"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/811b1261705b4c525e165fa9ee23ae191727a623/recipes/evil-goggles"; @@ -21783,22 +21783,22 @@ license = lib.licenses.free; }; }) {}; - evil-nerd-commenter = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + evil-nerd-commenter = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "evil-nerd-commenter"; - version = "20180408.630"; + version = "20180411.640"; src = fetchFromGitHub { owner = "redguardtoo"; repo = "evil-nerd-commenter"; - rev = "912a967fe5f3391c2a02d86b7522a89dae2d5274"; - sha256 = "1mz9h4cfwd5n6gy3wxs5w87svxn4n13qsr8cqc8ck9y9bsxf4ppw"; + rev = "34d411715ead5829d6d8969511047feb703b067e"; + sha256 = "0ax846dy2hbrbvkj7nzfkcl5i1x9rga8bvg0ln55ivhq0iiy1lkv"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a3e1ff69e7cc95a5b5d628524ad836833f4ee736/recipes/evil-nerd-commenter"; sha256 = "1pa5gh065hqn5mhs47qvjllwdwwafl0clk555mb6w7svq58r6i8d"; name = "evil-nerd-commenter"; }; - packageRequires = []; + packageRequires = [ emacs ]; meta = { homepage = "https://melpa.org/#/evil-nerd-commenter"; license = lib.licenses.free; @@ -22801,12 +22801,12 @@ eziam-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "eziam-theme"; - version = "20180410.621"; + version = "20180414.329"; src = fetchFromGitHub { owner = "thblt"; repo = "eziam-theme-emacs"; - rev = "0e9067db5de334b8f4371896230eed617f236918"; - sha256 = "1z0m3pzhyif1rx8g4gzg1wfdqdkxdaahjjq8hx2fj4k4l16bia99"; + rev = "96595833110cd64c391e0ccd5230782a8f0a4e08"; + sha256 = "0nvwgxlrbfhchb7z2qnw1lj66xpzn2b6yb6mhx0k31xdfr173wch"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4e0411583bd4fdbe425eb07de98851136fa1eeb0/recipes/eziam-theme"; @@ -24253,12 +24253,12 @@ flycheck = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, let-alist, lib, melpaBuild, pkg-info, seq }: melpaBuild { pname = "flycheck"; - version = "20180326.836"; + version = "20180415.1527"; src = fetchFromGitHub { owner = "flycheck"; repo = "flycheck"; - rev = "0a588ed2aaf8ea7088ba8abdc91af47d4d41a85a"; - sha256 = "0rvhk4mi4nh66r7rch69rvi0rbmrnxwqnk2rv8d1his0i7z53rq6"; + rev = "1eecec814debc6994b1aa8b6760cbfbbdf71e219"; + sha256 = "1in3sanhyd0cmivq7c5xxqpb5frzq77zp7rdyyki9pczpf9yv58a"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/649f9c3576e81409ae396606798035173cc6669f/recipes/flycheck"; @@ -25030,12 +25030,12 @@ flycheck-jest = callPackage ({ emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild }: melpaBuild { pname = "flycheck-jest"; - version = "20180409.1718"; + version = "20180410.2028"; src = fetchFromGitHub { owner = "jojojames"; repo = "flycheck-jest"; - rev = "370efb30f0856eb83abcbe50ecdf85842e95138d"; - sha256 = "0xjj1z9svzgrmk12r85iqcj5awal8ik5xfhf02s2iwknwqssx065"; + rev = "08f27c5ed97c83c445f99fab58f0b6c826f14449"; + sha256 = "1ipr1yyk5vf2i8q7923r18a216sgf759x5f6j5776jcjkhp98c98"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/31e2ac9de5f28ee9d847097cdeb60afa99476a51/recipes/flycheck-jest"; @@ -25601,8 +25601,8 @@ src = fetchFromGitHub { owner = "Andersbakken"; repo = "rtags"; - rev = "a595d13f60c13d67a28467b3941d5ed558102e91"; - sha256 = "0yp6h6nsbji7dmc9pnf9qi7zsqxrxa1bln90bn0y71xf6z11kbp4"; + rev = "4747d5b695bee40c3b0a2e3591ac8897571edd66"; + sha256 = "1qy71bx8nki73mqslw54hq5bn1asz5qg1b2848nrsj8zb2yd85x5"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/flycheck-rtags"; @@ -25702,12 +25702,12 @@ flycheck-swift3 = callPackage ({ emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild }: melpaBuild { pname = "flycheck-swift3"; - version = "20171231.452"; + version = "20180411.652"; src = fetchFromGitHub { owner = "GyazSquare"; repo = "flycheck-swift3"; - rev = "34973cd28ca5e63f8f6328a17fd7b78cc913b93d"; - sha256 = "1iy6j05dzpi7pi87y6rpjzmlnl2s9izqpbzknis2kx9072qddm3q"; + rev = "06a6f98d7e498860b345bbd03e96bfe59608f508"; + sha256 = "0h1n4x0fvqfb6jcapbab1ck6bj4d7irbn9zz2hxv2rlrkqxfsmh3"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f1fb8c731c118327dc0bbb726e046fec46bcfb82/recipes/flycheck-swift3"; @@ -26791,6 +26791,27 @@ license = lib.licenses.free; }; }) {}; + fold-dwim-org = callPackage ({ fetchFromGitHub, fetchurl, fold-dwim, lib, melpaBuild }: + melpaBuild { + pname = "fold-dwim-org"; + version = "20131203.551"; + src = fetchFromGitHub { + owner = "mattfidler"; + repo = "fold-dwim-org"; + rev = "c09bb2b46d65afbd1d0febc6fded7495be7a3037"; + sha256 = "14jvbkahwvv4wb0s9vp8gqmlpv1d4269j5rsjxn79q5pawjzslxw"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/97d22d9feaf521ce576b80d2933ecbc166c1dbe7/recipes/fold-dwim-org"; + sha256 = "0812p351rzvqcfn00k92nfhlg3y772y4z4b9f0xqnpa935y6harn"; + name = "fold-dwim-org"; + }; + packageRequires = [ fold-dwim ]; + meta = { + homepage = "https://melpa.org/#/fold-dwim-org"; + license = lib.licenses.free; + }; + }) {}; fold-this = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "fold-this"; @@ -27566,12 +27587,12 @@ futhark-mode = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "futhark-mode"; - version = "20171026.722"; + version = "20180416.830"; src = fetchFromGitHub { owner = "HIPERFIT"; repo = "futhark"; - rev = "d88bd11bc81a1f4d29a7b9d6890c59e5b6ee7b6f"; - sha256 = "1pgw7hnb8f3vjmzv9sayqqprq1sjmj0r1xfhrnixibybsps7bvlc"; + rev = "314e43c80fc31e15741136e61f3ee5f793ba190c"; + sha256 = "1i9rs9cb9l7hp678rf4w9r47zqy1pakyy7alfli192mm650w07l1"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/0607f01aad7e77d53595ad8db95d32acfd29b148/recipes/futhark-mode"; @@ -27710,22 +27731,22 @@ license = lib.licenses.free; }; }) {}; - gams-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + gams-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "gams-mode"; - version = "20180326.2325"; + version = "20180416.206"; src = fetchFromGitHub { owner = "ShiroTakeda"; repo = "gams-mode"; - rev = "2d6b5c29d84a42421ddc2f7f1e9c3a141d81c31c"; - sha256 = "0cri329g0b7ywqarg4jlmry574z7v15gdd9j7jnikq1s2jjgnb85"; + rev = "3022e9f8411628e6a210fb5843d858b15a7513f5"; + sha256 = "06hc8yy1g2vyvib8yrhwzs8fvgxnrxlw6iyzi7phjp9fgr3cp504"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c895a716636b00c2a158d33aab18f664a8601833/recipes/gams-mode"; sha256 = "0hx9mv4sqskz4nn7aks64hqd4vn3m7b34abzhy9bnmyw6d5zzfci"; name = "gams-mode"; }; - packageRequires = []; + packageRequires = [ emacs ]; meta = { homepage = "https://melpa.org/#/gams-mode"; license = lib.licenses.free; @@ -27879,12 +27900,12 @@ geiser = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "geiser"; - version = "20180329.548"; + version = "20180413.1646"; src = fetchFromGitHub { owner = "jaor"; repo = "geiser"; - rev = "e496177c7ccdc0a36d4809113b1c1f366c1e39ab"; - sha256 = "14nka5jqakiq0i72s35b4ibnvfvd5jdsg2194ai4bh27k1sn9mpr"; + rev = "ec3d0ea34081789da44f0b11b2cf05627a1e9b8e"; + sha256 = "0g79vz9b73p7g2zy8ml0glwiivq48d64yq3kd6wmq1qpx3zflrf2"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b0fe32d24cedd5307b4cccfb08a7095d81d639a0/recipes/geiser"; @@ -28194,12 +28215,12 @@ ghub = callPackage ({ emacs, fetchFromGitHub, fetchurl, let-alist, lib, melpaBuild }: melpaBuild { pname = "ghub"; - version = "20180409.1314"; + version = "20180414.1654"; src = fetchFromGitHub { owner = "magit"; repo = "ghub"; - rev = "21c9e94abcfa464db0dd475b26cff8059ada5798"; - sha256 = "1kx1s6p2z2jdqm8dr8jxba2iyj448cnx9m2p88749xfqjgy0nw6k"; + rev = "27e7b17473d17b684ddf873e4281f2595c05ca65"; + sha256 = "00yjgz8c03l8v99gi2ly08iwp10bv5s6hhhlvw1kyg00mflgn4m9"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/70a4dbd62fd6ebb4e056d0e97fa1a958437ddc91/recipes/ghub"; @@ -28446,12 +28467,12 @@ git-commit = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, with-editor }: melpaBuild { pname = "git-commit"; - version = "20180405.1137"; + version = "20180411.1649"; src = fetchFromGitHub { owner = "magit"; repo = "magit"; - rev = "fb2d481e8e4a7c8dac23b82e4a008747e4ce9fab"; - sha256 = "1dxbx5qhddx56k9146sm4f9nx8j0h0cy1afx1j5d6271rjb9nm49"; + rev = "16785d7962cf84df12cf1e498b2c96519e84d235"; + sha256 = "0ifzqqsyqk5x3d8zvq0yspcfhlndl7ppv6yxzz8w27pgb4h0jqwn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/cec5af50ae7634cc566adfbfdf0f95c3e2951c0c/recipes/git-commit"; @@ -28698,12 +28719,12 @@ git-ps1-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "git-ps1-mode"; - version = "20170102.1944"; + version = "20180413.247"; src = fetchFromGitHub { owner = "10sr"; repo = "git-ps1-mode-el"; - rev = "e41c630f5d04cb1a4d38a4b500d7a154a96a4655"; - sha256 = "11bg953nk5x501vkr0jrz710pz3qxla27bgrd4gp503fbygnixkz"; + rev = "6a06bf57cbe614ab26032b153d3dcf4fb4bfa7ee"; + sha256 = "1lgvzla1bg7gmkj41hmzhiqcbdmdw9ycpzfvpl6xl0sm0fk3j3rj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/ea177b5ea168828881bd8dcd29ef6b4cb81317f0/recipes/git-ps1-mode"; @@ -29227,8 +29248,8 @@ src = fetchFromGitHub { owner = "magit"; repo = "ghub"; - rev = "21c9e94abcfa464db0dd475b26cff8059ada5798"; - sha256 = "1kx1s6p2z2jdqm8dr8jxba2iyj448cnx9m2p88749xfqjgy0nw6k"; + rev = "27e7b17473d17b684ddf873e4281f2595c05ca65"; + sha256 = "00yjgz8c03l8v99gi2ly08iwp10bv5s6hhhlvw1kyg00mflgn4m9"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/70a4dbd62fd6ebb4e056d0e97fa1a958437ddc91/recipes/glab"; @@ -30256,8 +30277,8 @@ src = fetchFromGitHub { owner = "google"; repo = "styleguide"; - rev = "5508c2f7dfaba43b30d413c943560476c2e5a46c"; - sha256 = "12f6zw4byx7m6v81q2szabpy0ky8cpyn1drcjyi6yvra11z6747a"; + rev = "1b206ee36263b16ec18f7b2f86a2b770b7490844"; + sha256 = "0vwx5h7b0f4yv5aqznw8zq2fnwwdmrcfa270v16dzdfr5a7n3pj3"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b4e7f5f641251e17add561991d3bcf1fde23467b/recipes/google-c-style"; @@ -30529,8 +30550,8 @@ src = fetchFromGitHub { owner = "vmware"; repo = "govmomi"; - rev = "e85222dd8ace4ed0e608da847b10843c8f19a677"; - sha256 = "0am2lkz50d5ics1hyxcrj16lcjzs0h0rkr1r8madqmdlrpzy1myn"; + rev = "d3ae3004773719bcc413ff8e3396f2ce6bf0827b"; + sha256 = "0l06li4d7mppj7r7xvx4dpvi0asdcazwj3nil6kd1in2pfq3hh4y"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/92d6391318021c63b06fe39b0ca38f667bb45ae9/recipes/govc"; @@ -30655,8 +30676,8 @@ src = fetchFromGitHub { owner = "Groovy-Emacs-Modes"; repo = "groovy-emacs-modes"; - rev = "e587fb73a94144ea6c8c48a615f55985eee493a5"; - sha256 = "1zqbq023wlynxdpr2qf1s2liidbwawc03bf67j0zhmvipq16hb3n"; + rev = "0aea74def58791b2343a8f0139c2f2a6a0941877"; + sha256 = "0aih46rk2zzxhbx4k65w1lmg3ibxnkimdfpyxc5qfdcr4kyfg06i"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3fe318b4e51a280a55c01fa30455e4a180df8bd6/recipes/grails-mode"; @@ -30977,12 +30998,12 @@ grep-context = callPackage ({ cl-lib ? null, dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "grep-context"; - version = "20180409.1227"; + version = "20180415.435"; src = fetchFromGitHub { owner = "mkcms"; repo = "grep-context"; - rev = "a13929bff6a25a09678bf8922d906acefbbd8e50"; - sha256 = "0sl5g8amgxjwj0q30nvrd141hwg9xg2gqy24d96qgxzybmb7y554"; + rev = "4c63d0f2654dee1e249c2054d118d674a757bd45"; + sha256 = "0n2bc9q6bvbfpaqivp3ajy9ad1wr7hfdd98qhnspsap67p73kfn4"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/41dbaf627ae4ef86c222d2b6b5d3523fdb9a4637/recipes/grep-context"; @@ -31080,12 +31101,12 @@ groovy-mode = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "groovy-mode"; - version = "20180410.313"; + version = "20180412.538"; src = fetchFromGitHub { owner = "Groovy-Emacs-Modes"; repo = "groovy-emacs-modes"; - rev = "e587fb73a94144ea6c8c48a615f55985eee493a5"; - sha256 = "1zqbq023wlynxdpr2qf1s2liidbwawc03bf67j0zhmvipq16hb3n"; + rev = "0aea74def58791b2343a8f0139c2f2a6a0941877"; + sha256 = "0aih46rk2zzxhbx4k65w1lmg3ibxnkimdfpyxc5qfdcr4kyfg06i"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3fe318b4e51a280a55c01fa30455e4a180df8bd6/recipes/groovy-mode"; @@ -31290,12 +31311,12 @@ guix = callPackage ({ bui, dash, edit-indirect, emacs, fetchFromGitHub, fetchurl, geiser, lib, magit-popup, melpaBuild }: melpaBuild { pname = "guix"; - version = "20180408.1232"; + version = "20180414.1025"; src = fetchFromGitHub { owner = "alezost"; repo = "guix.el"; - rev = "90e028cc1f82b94614679cda2574a9d3efed2913"; - sha256 = "1l4bgfk5ir6n7k64jb3s7xplrayk7719gkl25lfcnd0i8r4ib638"; + rev = "00c87a9cafa3d74840be02efa2516286515b6f93"; + sha256 = "0mbri7p7hm5bfqw8i8wl5yc5av13sd77bs15af44nv8p5gqx7wng"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b3d8c73e8a946b8265487a0825d615d80aa3337d/recipes/guix"; @@ -32065,12 +32086,12 @@ helm = callPackage ({ async, emacs, fetchFromGitHub, fetchurl, helm-core, lib, melpaBuild, popup }: melpaBuild { pname = "helm"; - version = "20180410.1155"; + version = "20180413.335"; src = fetchFromGitHub { owner = "emacs-helm"; repo = "helm"; - rev = "6ddc80a5ae303c275d60046358dfefc08f8f01d2"; - sha256 = "0af4ddrs70jn3v5ykr1vcymcd3ixmshqjrzicm0b1594ln535jp8"; + rev = "b72baa1183fabf5213e4d50a38358288f7af5a86"; + sha256 = "0q89c9axk8a7w3hncl7wak0z3yg022vwf3lwfmww6xkn9daxldjx"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7e8bccffdf69479892d76b9336a4bec3f35e919d/recipes/helm"; @@ -32254,12 +32275,12 @@ helm-bbdb = callPackage ({ bbdb, fetchFromGitHub, fetchurl, helm, lib, melpaBuild }: melpaBuild { pname = "helm-bbdb"; - version = "20180319.639"; + version = "20180412.807"; src = fetchFromGitHub { owner = "emacs-helm"; repo = "helm-bbdb"; - rev = "7582e93871d6ab9aeebd87f5f63c43d3207b71fe"; - sha256 = "11nv31rlf6f9aha39pgzapah3drb547gfymha3ihpdsk2xy68ij5"; + rev = "1f182900207cff383d62d91e839b48dd4874f2a5"; + sha256 = "0m08zb1i6m8i0n590f1717p8dxb7w9d4mh3wnkd829zjhycradrd"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7025c319fcabc64576c0c6554d0d572cef697693/recipes/helm-bbdb"; @@ -32674,12 +32695,12 @@ helm-core = callPackage ({ async, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "helm-core"; - version = "20180409.2054"; + version = "20180414.2257"; src = fetchFromGitHub { owner = "emacs-helm"; repo = "helm"; - rev = "6ddc80a5ae303c275d60046358dfefc08f8f01d2"; - sha256 = "0af4ddrs70jn3v5ykr1vcymcd3ixmshqjrzicm0b1594ln535jp8"; + rev = "b72baa1183fabf5213e4d50a38358288f7af5a86"; + sha256 = "0q89c9axk8a7w3hncl7wak0z3yg022vwf3lwfmww6xkn9daxldjx"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/ef7a700c5665e6d72cb4cecf7fb5a2dd43ef9bf7/recipes/helm-core"; @@ -32779,12 +32800,12 @@ helm-descbinds = callPackage ({ fetchFromGitHub, fetchurl, helm, lib, melpaBuild }: melpaBuild { pname = "helm-descbinds"; - version = "20160916.713"; + version = "20180411.2215"; src = fetchFromGitHub { owner = "emacs-helm"; repo = "helm-descbinds"; - rev = "6d5ddc11e6cef86548bd6b3e0d840112d602659c"; - sha256 = "03b79wdcp4im0fwadzhyc8jxl2wqvg8gmpflnznrwz3l71bi4sqq"; + rev = "cc000b1bf580577d032c9f0563168b6bbdd6d290"; + sha256 = "1z5z0yfj1h3852zn4sh0p9dl3viyfiqpw28jczqgm8rcng94rvbw"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/447610a05422cd2f35399e43d98bf46410ff0408/recipes/helm-descbinds"; @@ -33913,12 +33934,12 @@ helm-ls-git = callPackage ({ fetchFromGitHub, fetchurl, helm, lib, melpaBuild }: melpaBuild { pname = "helm-ls-git"; - version = "20170727.1238"; + version = "20180415.2336"; src = fetchFromGitHub { owner = "emacs-helm"; repo = "helm-ls-git"; - rev = "d116bb96b6ea946f633ed7735fbf38a63e611a3a"; - sha256 = "0z09qvb6yyz2vnxkcg6xhaawja1ynxfwzx5j2aqyiicwqbyf3kvg"; + rev = "c63c27f10d0cc409ab528d20700bccc52abbab26"; + sha256 = "1xmrg49b7r3ry85gizllnll4v6wk3qxmhwrd7d0jifx5df9v13f9"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b487b4c0db9092bb7e32aad9265b79a9d18c8478/recipes/helm-ls-git"; @@ -34225,22 +34246,22 @@ license = lib.licenses.free; }; }) {}; - helm-pass = callPackage ({ auth-source-pass, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, password-store }: + helm-pass = callPackage ({ auth-source-pass, emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, password-store }: melpaBuild { pname = "helm-pass"; - version = "20180325.1453"; + version = "20180415.2038"; src = fetchFromGitHub { owner = "jabranham"; repo = "helm-pass"; - rev = "c451b9739ef742df06af9d098f6b0fb48e807f66"; - sha256 = "1ndhyb796svisq5wdshxlz4nzjsphmwiwf9kp5f077bi6lx25xkn"; + rev = "ebcbef1a962795a36e3491ae926e2a4b8a8b0ebb"; + sha256 = "13far24blzmcjyxkwnsqbx0g865p233bx21885nw59rp28frg538"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d8100599d69a760cd4548004a552cc0adcdb3bed/recipes/helm-pass"; sha256 = "11yknsch0avdl8jmj54xk45nba3qh8bhsdrc2rds084i7d5gmqia"; name = "helm-pass"; }; - packageRequires = [ auth-source-pass helm password-store ]; + packageRequires = [ auth-source-pass emacs helm password-store ]; meta = { homepage = "https://melpa.org/#/helm-pass"; license = lib.licenses.free; @@ -34673,8 +34694,8 @@ src = fetchFromGitHub { owner = "Andersbakken"; repo = "rtags"; - rev = "a595d13f60c13d67a28467b3941d5ed558102e91"; - sha256 = "0yp6h6nsbji7dmc9pnf9qi7zsqxrxa1bln90bn0y71xf6z11kbp4"; + rev = "4747d5b695bee40c3b0a2e3591ac8897571edd66"; + sha256 = "1qy71bx8nki73mqslw54hq5bn1asz5qg1b2848nrsj8zb2yd85x5"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/helm-rtags"; @@ -34942,12 +34963,12 @@ helm-system-packages = callPackage ({ emacs, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, seq }: melpaBuild { pname = "helm-system-packages"; - version = "20180408.555"; + version = "20180412.2325"; src = fetchFromGitHub { owner = "emacs-helm"; repo = "helm-system-packages"; - rev = "5f7b1ee2f521a2cafae6c762f8f25c08c5d6a016"; - sha256 = "0qf5fg5jxwyspficyk5vac4paaqkhzr9n77wy0rn0k3agjm9f2y9"; + rev = "986b7bd360a705053500c4ce2c9bea03dd7b24a6"; + sha256 = "19iklhpxgh5xx6h4dysf58nd46lmyb46xj601lf7kbwl6yq0y61f"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/0c46cfb0fcda0500e15d04106150a072a1a75ccc/recipes/helm-system-packages"; @@ -36619,12 +36640,12 @@ htmlize = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "htmlize"; - version = "20180328.2341"; + version = "20180412.1244"; src = fetchFromGitHub { owner = "hniksic"; repo = "emacs-htmlize"; - rev = "726c77b909f825b27e734a5460e3e2b63cfc60b0"; - sha256 = "02v14p01qkj1i38r181d6azcdj00331bkdlgcidg6brljl6jzz41"; + rev = "315a8f23cfd3e87642ff9e30ae3300c7a84244d5"; + sha256 = "0pjiid5a16xx9n5bvfff612mpli00y9nbzjapn9f1y79yl99yvxy"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/075aa00a0757c6cd1ad392f0300bf5f1b937648d/recipes/htmlize"; @@ -36808,12 +36829,12 @@ hy-mode = callPackage ({ dash, dash-functional, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "hy-mode"; - version = "20180410.1233"; + version = "20180411.1231"; src = fetchFromGitHub { owner = "hylang"; repo = "hy-mode"; - rev = "03322cf34d94ba99aa86f8b3fa213c81a5c185b7"; - sha256 = "1z8c7nsfcb2rfimyz7vz92ac56iwr2whkzaq62gn0q6cqcrzwcb1"; + rev = "d72192e36aeeae1c7784c95569cc330981465714"; + sha256 = "1ld1q06i2srnwz1vkwf023vmcranb76xvskhclb8bmwk7gimz95s"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/fc9ab5cf16b61bb27559cd8ec5cf665a5aab2154/recipes/hy-mode"; @@ -37601,27 +37622,6 @@ license = lib.licenses.free; }; }) {}; - ido-ubiquitous = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, ido-completing-read-plus, lib, melpaBuild }: - melpaBuild { - pname = "ido-ubiquitous"; - version = "20180216.949"; - src = fetchFromGitHub { - owner = "DarwinAwardWinner"; - repo = "ido-completing-read-plus"; - rev = "2f4050ebd9591a3c2c73cbae1014c908226c43ec"; - sha256 = "1jg3k8ivfjfqh5gw0zzwknvpa8hq21n9p2k913wvxyazv0b1gvqx"; - }; - recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/6104efc035bcf469d133ab9a2caf42c9d4482334/recipes/ido-ubiquitous"; - sha256 = "11sdk0ymsqnsw1gycvq2wj4j0g502fp23qk6q9d95lm98nz68frz"; - name = "ido-ubiquitous"; - }; - packageRequires = [ cl-lib ido-completing-read-plus ]; - meta = { - homepage = "https://melpa.org/#/ido-ubiquitous"; - license = lib.licenses.free; - }; - }) {}; ido-vertical-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ido-vertical-mode"; @@ -39385,12 +39385,12 @@ ivy = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ivy"; - version = "20180402.1858"; + version = "20180415.905"; src = fetchFromGitHub { owner = "abo-abo"; repo = "swiper"; - rev = "9c3c3822b0786ee517d9f0afdaa82245e1d1b02b"; - sha256 = "1k4lzy0a0n501d8b7y0hvz7svn894ch2nrjf6fkdgyj2dgd9bj7q"; + rev = "1181d0f7acb9e77a15fa7e62cb1027979185c853"; + sha256 = "0vsl346axdlkcv96cxlciw7bmvxwl2ficjgw9nxrsvhsjsy7md02"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/06c24112a5e17c423a4d92607356b25eb90a9a7b/recipes/ivy"; @@ -39536,8 +39536,8 @@ src = fetchFromGitHub { owner = "abo-abo"; repo = "swiper"; - rev = "9c3c3822b0786ee517d9f0afdaa82245e1d1b02b"; - sha256 = "1k4lzy0a0n501d8b7y0hvz7svn894ch2nrjf6fkdgyj2dgd9bj7q"; + rev = "1181d0f7acb9e77a15fa7e62cb1027979185c853"; + sha256 = "0vsl346axdlkcv96cxlciw7bmvxwl2ficjgw9nxrsvhsjsy7md02"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/06c24112a5e17c423a4d92607356b25eb90a9a7b/recipes/ivy-hydra"; @@ -39725,8 +39725,8 @@ src = fetchFromGitHub { owner = "Andersbakken"; repo = "rtags"; - rev = "a595d13f60c13d67a28467b3941d5ed558102e91"; - sha256 = "0yp6h6nsbji7dmc9pnf9qi7zsqxrxa1bln90bn0y71xf6z11kbp4"; + rev = "4747d5b695bee40c3b0a2e3591ac8897571edd66"; + sha256 = "1qy71bx8nki73mqslw54hq5bn1asz5qg1b2848nrsj8zb2yd85x5"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/ivy-rtags"; @@ -41542,12 +41542,12 @@ kaolin-themes = callPackage ({ autothemer, cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "kaolin-themes"; - version = "20180407.400"; + version = "20180416.401"; src = fetchFromGitHub { owner = "ogdenwebb"; repo = "emacs-kaolin-themes"; - rev = "0a80628e083db6e9d4b4af73be5d917d7d667330"; - sha256 = "1brb0l39xkl19h9xslvmms9vcziygfp244xs5r3n4dqn43c7rr68"; + rev = "2afd1be2a431b59e82ce22353b57bb7def851da5"; + sha256 = "19y5j2jha3q3i0l06bzywgxbc8q34sc1rh76j0wfvm6r6yxq1bwa"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/043a4e3bd5301ef8f4df2cbda0b3f4111eb399e4/recipes/kaolin-themes"; @@ -42071,8 +42071,8 @@ src = fetchFromGitHub { owner = "kivy"; repo = "kivy"; - rev = "d3d517dd236da48876742fec6881d8822ac356df"; - sha256 = "1pfwnly4s6xwc5ggan5pmr7hiq4z08wr2pb0iv9d4lvbjqm044c9"; + rev = "94d623f914745aab67715356db6731860a3e37e1"; + sha256 = "1hs69p79f27rdy8v4dld46qdnsszm7f4xx0nqlvz1pgy0wm3lq71"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/688e2a114073958c413e56e1d117d48db9d16fb8/recipes/kivy-mode"; @@ -42529,12 +42529,12 @@ langtool = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "langtool"; - version = "20170917.2154"; + version = "20180409.316"; src = fetchFromGitHub { owner = "mhayashi1120"; repo = "Emacs-langtool"; - rev = "bae4bdd240583b2253b4ff03af5295146e285103"; - sha256 = "0zwaddpmvkq7v5nnyzacmx0ql5zjlisvkqwa2knw3pihngr160cd"; + rev = "d93286722cff3fecf8641a4a6c3b0691f30362fe"; + sha256 = "17xa055705n4jb7nafqvqgl0a6fdaxp3b3q8q0gsv5vzycsc74ga"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/503845e79e67c921f1fde31447f3dd4da2b6f993/recipes/langtool"; @@ -42822,12 +42822,12 @@ lcr = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "lcr"; - version = "20180224.1243"; + version = "20180414.1256"; src = fetchFromGitHub { owner = "jyp"; repo = "lcr"; - rev = "6caa2bac7056dcf42c4cb88a1d5fbe1c9d71a9b4"; - sha256 = "0xvl0dqxwim6nmm6f9ddyp0r6j1n719zlgm2a3f49dskhnkn798z"; + rev = "49a59d80a4b55cc421cb55430ff8258887382c3d"; + sha256 = "1fds0s0if9m155v5hk5l0ihc6wr331qif5bc013w04hrlkn4v5jh"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/29374d3da932675b7b3e28ab8906690dad9c9cbe/recipes/lcr"; @@ -42885,12 +42885,12 @@ ledger-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ledger-mode"; - version = "20180317.2003"; + version = "20180416.105"; src = fetchFromGitHub { owner = "ledger"; repo = "ledger-mode"; - rev = "74b242f9cfd9e3a0735c4041b3941ddb65642fc9"; - sha256 = "1fyyhrr4600q706v05pnc25j4apmz8m52jdb1s7jnwph89zwm18c"; + rev = "fa09a3bdd25a532b8ee1335e22b7427eb0d231e9"; + sha256 = "0hp7p6nmxp4ass17vnlx0r73k9gc4z8aknsmpwpyw1radx26vy1k"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1549048b6f57fbe9d1f7fcda74b78a7294327b7b/recipes/ledger-mode"; @@ -43502,12 +43502,12 @@ lispy = callPackage ({ ace-window, emacs, fetchFromGitHub, fetchurl, hydra, iedit, lib, melpaBuild, swiper, zoutline }: melpaBuild { pname = "lispy"; - version = "20180405.1200"; + version = "20180415.1117"; src = fetchFromGitHub { owner = "abo-abo"; repo = "lispy"; - rev = "a7e1cf742e72199cc75aa5e1e686991ba4a23bc4"; - sha256 = "0qg85gz5akayvhb5fmn1qx7s9847gry4g20xcnq8llr839lq28dl"; + rev = "582c9994688fcbbda454207e4112ad4a0cd80970"; + sha256 = "02frf3r2m0hfz3xf3vvcccxi4gvkl9fz5asrgrc0f6v45850mdv2"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e23c062ff32d7aeae486c01e29c56a74727dcf1d/recipes/lispy"; @@ -43544,12 +43544,12 @@ lispyville = callPackage ({ cl-lib ? null, emacs, evil, fetchFromGitHub, fetchurl, lib, lispy, melpaBuild }: melpaBuild { pname = "lispyville"; - version = "20180408.1649"; + version = "20180414.1952"; src = fetchFromGitHub { owner = "noctuid"; repo = "lispyville"; - rev = "083f5e5a9194081e90039c367b464aa896e9f91c"; - sha256 = "13z0r09h52nw3j9vzbfpbhl18s8hxyagmq2ni3d2s8s96b7kd939"; + rev = "d2491462647fc6cffcc8f40c2a518a4948f2afcb"; + sha256 = "029jg6nggk5qvrskvlgb52ymgbakd56cnva1mgb10invr0wpswqq"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b5d96d3603dc328467fcce29d3ac1b0a02833d51/recipes/lispyville"; @@ -44427,8 +44427,8 @@ src = fetchFromGitHub { owner = "emacs-lsp"; repo = "lsp-javascript"; - rev = "3f22586d23a9dbcb6fc9ab646cbe6fa25c912e07"; - sha256 = "1bfp61dbfji8ac40d4a1p38k5glclwbh1ahv2byvhkpf35qjzd0x"; + rev = "2c1f2f4cb24c30fcefb2d07dad3f40b058c90c1f"; + sha256 = "0pjzywlg981pvg4015w11b1dzrvqm1h3fjdl6qp6pv7iq2x9hxdp"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/999a4b0cd84e821c7e785ae4e487f32cff5c346b/recipes/lsp-javascript-typescript"; @@ -44444,12 +44444,12 @@ lsp-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "lsp-mode"; - version = "20180408.1020"; + version = "20180416.622"; src = fetchFromGitHub { owner = "emacs-lsp"; repo = "lsp-mode"; - rev = "76ed991561435c8643990ea8c8b45b4210dfa5ec"; - sha256 = "18wzwplyfhr4skapsm9v3lslvxkn4ngih5pki7sw2swknkhfwzh8"; + rev = "34a669b76ac0aa45b4917f882687ca7577814249"; + sha256 = "091ph46y6mb9rf0saar0vb230z1kf8w74f3dkcm7hs7b1k7khj3f"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1a7b69312e688211089a23b75910c05efb507e35/recipes/lsp-mode"; @@ -44549,12 +44549,12 @@ lsp-ui = callPackage ({ dash, dash-functional, emacs, fetchFromGitHub, fetchurl, flycheck, lib, lsp-mode, markdown-mode, melpaBuild }: melpaBuild { pname = "lsp-ui"; - version = "20180410.1111"; + version = "20180412.1807"; src = fetchFromGitHub { owner = "emacs-lsp"; repo = "lsp-ui"; - rev = "b8d0357c21bc9e9dde46e2c4e7e16d06ab6097b9"; - sha256 = "1xydm28092ci1nrrb3viv9nnl6imsmygchns6kigdglicc2wlby5"; + rev = "146efa7414a91090c494e24fac364011bc884f31"; + sha256 = "0076kjv1wpw079mbv35v0j609xhis7xrvx6jg54hnb7y5h5rkqqz"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1e4fa7cdf71f49f6998b26d81de9522248bc58e6/recipes/lsp-ui"; @@ -44913,12 +44913,12 @@ magit = callPackage ({ async, dash, emacs, fetchFromGitHub, fetchurl, ghub, git-commit, let-alist, lib, magit-popup, melpaBuild, with-editor }: melpaBuild { pname = "magit"; - version = "20180410.1528"; + version = "20180416.852"; src = fetchFromGitHub { owner = "magit"; repo = "magit"; - rev = "fb2d481e8e4a7c8dac23b82e4a008747e4ce9fab"; - sha256 = "1dxbx5qhddx56k9146sm4f9nx8j0h0cy1afx1j5d6271rjb9nm49"; + rev = "16785d7962cf84df12cf1e498b2c96519e84d235"; + sha256 = "0ifzqqsyqk5x3d8zvq0yspcfhlndl7ppv6yxzz8w27pgb4h0jqwn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b0a9a6277974a7a38c0c46d9921b54747a85501a/recipes/magit"; @@ -45111,12 +45111,12 @@ magit-org-todos = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, magit, melpaBuild }: melpaBuild { pname = "magit-org-todos"; - version = "20180319.859"; + version = "20180412.1542"; src = fetchFromGitHub { owner = "danielma"; repo = "magit-org-todos.el"; - rev = "df206287737b9671f2e36ae7b1474ebbe9940d2a"; - sha256 = "0kdp7k7jnnrkhsg0xh1c3h7iz0vgi120gf5xwl1hxy61avivnxrn"; + rev = "0bfa36bbc50e62de0a3406031cb93e2f57dcdc55"; + sha256 = "07r5x256k1fjjxs1yfg41kc94nwvnjlk2vvknkra3j8v9p0j88m7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/84480cad490cab2f087a484ed7b9d3d3064bbd29/recipes/magit-org-todos"; @@ -45157,8 +45157,8 @@ src = fetchFromGitHub { owner = "magit"; repo = "magit-popup"; - rev = "32e6da899abd6657c098534c5775fc7177047f49"; - sha256 = "0nrvs7gwd9kn4n808akrydn7zggvy9zyk38yrcmm561kw0h0h903"; + rev = "a0b22e30d135d4f83a9227b3fa13b1377f9be0df"; + sha256 = "0sn9gi0qm3q6c63f1jd67pkc54r2gqk8bzh21x48n2x2v4f84s63"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/0263ca6aea7bf6eae26a637454affbda6bd106df/recipes/magit-popup"; @@ -45279,12 +45279,12 @@ magma-mode = callPackage ({ cl-lib ? null, dash, f, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "magma-mode"; - version = "20160304.408"; + version = "20180413.727"; src = fetchFromGitHub { owner = "ThibautVerron"; repo = "magma-mode"; - rev = "528c96a269980dcc6b65e2e973510ff07e6b9fc4"; - sha256 = "1pq6ckxp3dcb2f6xfsd4jwd43r9d0920m30ammp39glgc39p9lsq"; + rev = "d8e41b3c0bc7d37be78fdbcabf6c13c9e182dfaa"; + sha256 = "1wlwgbj3hslfxl21nz5s7g0p4kdpc5ph58jp7mrz0dws5cw3sj02"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/59764a0aab7c3f32b5a872a3d10a7e144f273a7e/recipes/magma-mode"; @@ -46662,8 +46662,8 @@ src = fetchFromGitHub { owner = "purpleidea"; repo = "mgmt"; - rev = "15681ddca9e96baab2983240125ed2aac5d9de27"; - sha256 = "02cyyd8hr7d9bmn3r8nbza3pb15hikmwhvjmlx1gh13iidjq5vmj"; + rev = "754480a9b6f2d62093fb7a264a5c4ac42fc57997"; + sha256 = "1z7gaij17yxk3ikxljlb54cvdcz0lhnm8wl0bpzpiycpnfkqxcy4"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4cf3dd70ae73c2b049e201a3547bbeb9bb117983/recipes/mgmtconfig-mode"; @@ -48380,8 +48380,8 @@ src = fetchFromGitHub { owner = "sagarjha"; repo = "multi-run"; - rev = "87d9eed414999fd94685148d39e5308c099e65ca"; - sha256 = "0m4wk6sf01b7bq5agmyfcm9kpmwmd90wbvh7fkhs61mrs86s2zw8"; + rev = "3c5e44afd69aac2e0a5be118cf6249b757e2889a"; + sha256 = "0jknx6b973wlhmg01nymncqr2809kmjhchv75v92fas5yvn1pb3w"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e05ad99477bb97343232ded7083fddb810ae1781/recipes/multi-run"; @@ -49844,12 +49844,12 @@ no-littering = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "no-littering"; - version = "20180331.155"; + version = "20180414.503"; src = fetchFromGitHub { owner = "emacscollective"; repo = "no-littering"; - rev = "b67f52072096f7e9efe98d2cc106ba39652c7545"; - sha256 = "108zjw83rh7yfrf999lx4dd7vh5281qigrnli50q75j4qhnmsfm7"; + rev = "9bffebc0f4858a06ba374f1d48a7dffd3537b93e"; + sha256 = "02dhplz597r5qp1mljy1npx2kzg07l938d2xivwy9cd6jlkj35ya"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/57a2fb9524df3fdfdc54c403112e12bd70888b23/recipes/no-littering"; @@ -50874,12 +50874,12 @@ ob-http = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "ob-http"; - version = "20170920.2251"; + version = "20180416.822"; src = fetchFromGitHub { owner = "zweifisch"; repo = "ob-http"; - rev = "c4da6d47b3f96c31c00f9eaaf712b59afe00daef"; - sha256 = "0rhxp7gw4d5yp6yvjcp80in22wckj4zl9siykalj0jm97hkwqmzz"; + rev = "b68a0187e4f67e57891a3faae384d650a1cf31fc"; + sha256 = "0107xn1z2im8672lwsw4r7blza1gamgihy9aahxyf27jc0a2zvfx"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/950b02f76a04f453992b8720032e8c4cec9a039a/recipes/ob-http"; @@ -52122,12 +52122,12 @@ org-alert = callPackage ({ alert, dash, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "org-alert"; - version = "20170724.2116"; + version = "20180413.2111"; src = fetchFromGitHub { owner = "groksteve"; repo = "org-alert"; - rev = "3b7417ac12f2710e88f8dff538670621064ef8bc"; - sha256 = "1hyl4b2r7wzdfr2m7x8pgpylia3z15fihn679xdiyc32rzy7k5vk"; + rev = "85fd01f5bde7cb3adb167a8e37e52865d49c9579"; + sha256 = "1isb6ym8c22f9y2wph6zy90x9nl4g51fal68vfklg8bq1pywzj7a"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/2976b7f9271bc46679a5774ff5f388b81a9f0cf8/recipes/org-alert"; @@ -52269,12 +52269,12 @@ org-brain = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, org }: melpaBuild { pname = "org-brain"; - version = "20180409.442"; + version = "20180411.1157"; src = fetchFromGitHub { owner = "Kungsgeten"; repo = "org-brain"; - rev = "e2e696b8bf6209272a6675f3c878d96a9c8fe643"; - sha256 = "14zlbb6l4h6h8ff3fsdlrlxs6fq96iw8hrmd4dvdg847ys3gjbld"; + rev = "6857c9dcf11135eef40b8f1f86d10a71cecc86ac"; + sha256 = "092rl3vfkbj7vcn49bibc1s3m0479l0isbhb2w7xb06dh8k8j9ih"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/47480fbae06e4110d50bc89db7df05fa80afc7d3/recipes/org-brain"; @@ -52773,12 +52773,12 @@ org-evil = callPackage ({ dash, evil, fetchFromGitHub, fetchurl, lib, melpaBuild, monitor, org }: melpaBuild { pname = "org-evil"; - version = "20171102.556"; + version = "20180416.953"; src = fetchFromGitHub { owner = "GuiltyDolphin"; repo = "org-evil"; - rev = "90a82ec72fb688ef98d1343c02dc3c6da9e4bbee"; - sha256 = "0fl9m1bgcmvxpdmb05lbna9snfrd8gbrn16c2w72b3asxx7acq94"; + rev = "4e1f949a6fb225e79e69cb8684c0629671b6b8e3"; + sha256 = "1nrcwjl50nycyraac2zwlx3346az7521icf1h718hqqw4r799ggk"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/17a4772d409aa5dbda5fb84d86c237fd2653c70b/recipes/org-evil"; @@ -52899,12 +52899,12 @@ org-index = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "org-index"; - version = "20180410.811"; + version = "20180414.208"; src = fetchFromGitHub { owner = "marcihm"; repo = "org-index"; - rev = "e319abddbdb3f0dc5ff30d6df6baaa9194db3c8f"; - sha256 = "1qxmp60x8wyb5vd06r6vcx5raxs8hmxb0l2hfq0jpdpdrcjidzlw"; + rev = "0dfe0a67979279345378ca006ab4f727df378aca"; + sha256 = "16wjzskq000grkanaw9zca2qbw9yzpndhfd2g0b0if2mf1g31mkv"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/54946e733901986304f7a7a5139b2818ebf97eb3/recipes/org-index"; @@ -54121,12 +54121,12 @@ org-wc = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "org-wc"; - version = "20180124.229"; + version = "20180415.2219"; src = fetchFromGitHub { owner = "tesujimath"; repo = "org-wc"; - rev = "6ff202a4612fe65b4e96bd551893fe8df67b0f51"; - sha256 = "1yqiqscj7cmnqd4s1lgbf7jbhcqlf3bwr52sabz7mqfs4iwdryhl"; + rev = "d22b4cff3e1157ca468b186eb789ca62b9214abd"; + sha256 = "0ysnydpm6lviak3mrqifim4zs2lffbjiv9nvb33qs8mi1dq2igji"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/852e0a5cee285cc9b5e2cd9e18061fc0fe91d5a6/recipes/org-wc"; @@ -55142,8 +55142,8 @@ src = fetchFromGitHub { owner = "kaushalmodi"; repo = "ox-hugo"; - rev = "3d91d3377e43dce981606a3b878563091e219c8b"; - sha256 = "0r3c532g8bswbdqjx12s1rgbw28w7ddq090j2dwlmwmqqh7w14vc"; + rev = "15a6df059f5eac0964c075c1386ce1c83cfe979d"; + sha256 = "11vndvwq64s7kc8a706favp7x7jc59sqwgs00sknfzznmpyy0xki"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/1e1240bb7b5bb8773f804b987901566a20e3e8a9/recipes/ox-hugo"; @@ -55558,12 +55558,12 @@ package-build = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "package-build"; - version = "20180330.2032"; + version = "20180414.938"; src = fetchFromGitHub { owner = "melpa"; repo = "package-build"; - rev = "50c41597d15fb5f39ec65d8009e10ea8fb11d67a"; - sha256 = "0l84iilg7jmr5q16h1jjmssq68f9xz45kvhgdspvrh6j723js12l"; + rev = "cf202c0a93bd5aabea59d16ad7ddf8c292c05990"; + sha256 = "18icx58yqig4c7zdvjz8jrhilbv5ygdyl56473mz1zyhvb3q42xy"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/948fb86b710aafe6bc71f95554655dfdfcab0cca/recipes/package-build"; @@ -55600,12 +55600,12 @@ package-lint = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "package-lint"; - version = "20180323.1852"; + version = "20180416.100"; src = fetchFromGitHub { owner = "purcell"; repo = "package-lint"; - rev = "5ac4122cf1e24649b387bec8630740cd4ec85b72"; - sha256 = "030jcapghpf1smmsb17q79dmgfmjqh5x3kvzlqcgmcgfdj2jvx7m"; + rev = "6929545b6c116bd3eb12d3481a78f381c759e6fc"; + sha256 = "19fj94i4ai1gzj2y2b2klw7xdsh4aki8zr4840lffn4a0f16nc7n"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9744d8521b4ac5aeb1f28229c0897af7260c6f78/recipes/package-lint"; @@ -55852,12 +55852,12 @@ pamparam = callPackage ({ emacs, fetchFromGitHub, fetchurl, hydra, lib, lispy, melpaBuild, worf }: melpaBuild { pname = "pamparam"; - version = "20180321.1041"; + version = "20180415.48"; src = fetchFromGitHub { owner = "abo-abo"; repo = "pamparam"; - rev = "bc3df2f1190c773f03fdd43fac5125da37f03de9"; - sha256 = "00jdc99gm8qplhs6jwlr6daa6rkpazbs1wicbdbiag9g7h8y7q5h"; + rev = "8fa25d06fb2ae6d992e738a10d8b2150e109d9bf"; + sha256 = "0p50cfmwgwahb1czqvgx2kvnd3k46zl0pybvxlyf45y4c4kr8wjp"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/067b5e3594641447478db8c1ffcb36d63018b1b2/recipes/pamparam"; @@ -57066,12 +57066,12 @@ persistent-scratch = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "persistent-scratch"; - version = "20170110.546"; + version = "20180414.1044"; src = fetchFromGitHub { owner = "Fanael"; repo = "persistent-scratch"; - rev = "551c655fa349e6f48e4e29f427fff7594f76ac1d"; - sha256 = "1iqfr8s4cvnnmqw5yxyr6b6nghbsc95mgjlc61qxa8wa1mpv31rz"; + rev = "85d753a27c198cc3611845ca144150d3baf4e3d8"; + sha256 = "08iypb0pbscbqcvg6p81rmazr5b7kdavjg2z9l37jha4vcb3nbcj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f1e32702bfa15490b692d5db59e22d2c07b292d1/recipes/persistent-scratch"; @@ -57654,12 +57654,12 @@ php-mode = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "php-mode"; - version = "20180409.537"; + version = "20180412.1002"; src = fetchFromGitHub { owner = "ejmr"; repo = "php-mode"; - rev = "6de29235218ae2bc3d96523e454e952729a4490a"; - sha256 = "0gbg34z4rnr2gnqpk6jq8k4ajws0nniyp2001gfwalifcfqlpaq8"; + rev = "ef69a8b63f70a89694087ab0f97545d103ad952c"; + sha256 = "0njhhlpv93rkskhzj6wyxyvvx839saix6d96x0ipairxv1arcj3j"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7cdbc35fee67b87b87ec72aa00e6dca77aef17c4/recipes/php-mode"; @@ -58036,8 +58036,8 @@ src = fetchFromGitHub { owner = "pwalsh"; repo = "pipenv.el"; - rev = "8298daefee1b044c58390c861a6a70937cb0601b"; - sha256 = "0y084hqf0ylzayx8xbss08g5c87jg9sn1jcwy83g68cjyvxfn2k3"; + rev = "7f1fb3dd1704e535e67860c58080e55fc89e07f4"; + sha256 = "1z1hdh6m10gam86zyhdfjksj2jxjrichdcz8qs3290lxy59f7agq"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d46738976f5dfaf899ee778b1ba6dcee455fd271/recipes/pipenv"; @@ -58647,12 +58647,12 @@ poet-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "poet-theme"; - version = "20180410.420"; + version = "20180415.2212"; src = fetchFromGitHub { owner = "kunalb"; repo = "poet"; - rev = "5bdc1fbe264a031706ce7a7bf012c50fe48b26c9"; - sha256 = "1xmi3155gssw06sfqfpdlki58j9bgfvsws1xhckb0x4y2qfjshin"; + rev = "70b514373ea32c20ce4e46809b3336af1a69d2c8"; + sha256 = "0jsgd4fgz6xliyfq46xn3ky7hr5ma4577h8kgshsbdidzwmp6xrr"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/40bbe29dee56f7989d8e87c03f4842e2b191acc3/recipes/poet-theme"; @@ -61073,8 +61073,8 @@ src = fetchFromGitHub { owner = "PyCQA"; repo = "pylint"; - rev = "39338dcb1c3b7b855db9688203ad2bfc8b8bf850"; - sha256 = "0z6am73an8jlsprqp4wi0wgpq0k9xbsq3c70l886v37cgbkmjmf2"; + rev = "56b5da6efd3a7ac934adbadf4d85abfc1d324d71"; + sha256 = "09c14bsfglvlbz0y7sx0di50p1iw033g5y8f3qxbwrxba3213pkv"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a073c91d6f4d31b82f6bfee785044c4e3ae96d3f/recipes/pylint"; @@ -61370,12 +61370,12 @@ pyvenv = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "pyvenv"; - version = "20180407.746"; + version = "20180415.614"; src = fetchFromGitHub { owner = "jorgenschaefer"; repo = "pyvenv"; - rev = "37265132a393ee1d176b0f72e258e2ab996d1ee0"; - sha256 = "0ma0k33bpq02jnrnhgqmxxa3wk457qb8rrk5an5yjfjnzqiz1sk1"; + rev = "d7f89bd4fd3d3be7f6ef82caed51b4e7d1d754fa"; + sha256 = "1dmj4yfbwlp9259is8av9ggsx08dfhqj2jd18hvvpxbhfqcybi8j"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e37236b89b9705ba7a9d134b1fb2c3c003953a9b/recipes/pyvenv"; @@ -61409,6 +61409,27 @@ license = lib.licenses.free; }; }) {}; + ql = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "ql"; + version = "20180404.943"; + src = fetchFromGitHub { + owner = "ieure"; + repo = "ql-el"; + rev = "c885d125d8972374b408f6eddf031e44dc6fa0c6"; + sha256 = "1l1jdvz1913m03ikcf9g3dsraaajqac1kzfy9c9xhzx8w7bbl80c"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/475bd8fd66c6d5b5c7e74aa2c4e094d313cc8303/recipes/ql"; + sha256 = "0wxjblqacs5nx2hyh7r6rlv1yngbhn6phn5rni4dw2dms98zj34z"; + name = "ql"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://melpa.org/#/ql"; + license = lib.licenses.free; + }; + }) {}; qml-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "qml-mode"; @@ -62493,8 +62514,8 @@ src = fetchFromGitHub { owner = "vic"; repo = "rebecca-theme"; - rev = "384f42481625327052af12e6a20e164765c20742"; - sha256 = "0bbary49c1c63qzg47nd4fqbvvm6y7xxbya50hf0d7pgv5b27n37"; + rev = "9ac0c71c2858b76dc5499f62c7c7fb7f9e8f16bc"; + sha256 = "0a0qf118gj2fag3j57zmli47939rn1jayvs2fwa4l280ipfvp2m7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/19f40f30113c7dabd76a2d0e52898e6d6be69a35/recipes/rebecca-theme"; @@ -63500,8 +63521,8 @@ src = fetchFromGitHub { owner = "dajva"; repo = "rg.el"; - rev = "943226043dc9055b282d0c035fd1e1cbdd562b22"; - sha256 = "0hm25x1zym4xdc4w1ayn1an4nrg1qwyh12vb9sxas3fplapm500k"; + rev = "d50bd106275f3ef7f77d0147857412fb065eef47"; + sha256 = "0zjhak534j1n03z6p9wjmgc48yy40icrp2x8y9vbvg4hgx8xh9lm"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9ce1f721867383a841957370946f283f996fa76f/recipes/rg"; @@ -63941,8 +63962,8 @@ src = fetchFromGitHub { owner = "Andersbakken"; repo = "rtags"; - rev = "a595d13f60c13d67a28467b3941d5ed558102e91"; - sha256 = "0yp6h6nsbji7dmc9pnf9qi7zsqxrxa1bln90bn0y71xf6z11kbp4"; + rev = "4747d5b695bee40c3b0a2e3591ac8897571edd66"; + sha256 = "1qy71bx8nki73mqslw54hq5bn1asz5qg1b2848nrsj8zb2yd85x5"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3dea16daf0d72188c8b4043534f0833fe9b04e07/recipes/rtags"; @@ -65636,12 +65657,12 @@ seoul256-theme = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "seoul256-theme"; - version = "20180405.2124"; + version = "20180412.1643"; src = fetchFromGitHub { owner = "anandpiyer"; repo = "seoul256-emacs"; - rev = "d2d11fc296decf7701f5688d182527541ac2acf7"; - sha256 = "0vzn01jqkqgfhsn3knf5q5qxx75jd38c1lrk72cxq3yrl62c071v"; + rev = "fb7dd994f9fed518693475b2b6de67d518417783"; + sha256 = "0arg66j25ixvmbhlgdjw12gzwsa5wmif7qw1mzfzd0sghgdbmj0v"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/seoul256-theme"; @@ -66305,6 +66326,27 @@ license = lib.licenses.free; }; }) {}; + show-marks = callPackage ({ fetchFromGitHub, fetchurl, fm, lib, melpaBuild }: + melpaBuild { + pname = "show-marks"; + version = "20130805.749"; + src = fetchFromGitHub { + owner = "vapniks"; + repo = "show-marks"; + rev = "97609566582e65eed0d0a854efa5c312f209115d"; + sha256 = "15vkk7lnnfwgzkiwpqz1l1qpnz2d10l82m10m0prbw03k1zx22c7"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/f2007ab49d123e324c8d7c09bca9de33468d98ab/recipes/show-marks"; + sha256 = "1jgxdclj88ca106vcvf1k8zbf7iwamy80c2ad8b3myz0f4zscjzb"; + name = "show-marks"; + }; + packageRequires = [ fm ]; + meta = { + homepage = "https://melpa.org/#/show-marks"; + license = lib.licenses.free; + }; + }) {}; showtip = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "showtip"; @@ -67022,12 +67064,12 @@ slime = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, macrostep, melpaBuild }: melpaBuild { pname = "slime"; - version = "20180330.423"; + version = "20180413.1720"; src = fetchFromGitHub { owner = "slime"; repo = "slime"; - rev = "a83b6ececbbe77cfdb7d54d7d24870a1071fb8c2"; - sha256 = "18hdgxjng6mq2fgy2dmisnyg547l3kwk3z7069h101xwh8dji3w5"; + rev = "26695c66162dcbb9dfd083c6e3b329c468e14ed9"; + sha256 = "1fj096yhvxnj47qvc0b3pw3vf7icxv2jdfa3nvap9aksj453xndb"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/14c60acbfde13d5e9256cea83d4d0d33e037d4b9/recipes/slime"; @@ -67190,12 +67232,12 @@ sly = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "sly"; - version = "20180410.1121"; + version = "20180412.355"; src = fetchFromGitHub { owner = "capitaomorte"; repo = "sly"; - rev = "08609ed0dbce7848844dd39b1b875a295cef7821"; - sha256 = "1jm4nzq72zp2qwc16vlxknl2k9a6i5623dzyr9j4zrp92kajah6n"; + rev = "7d12c47bc573c5497487cfba60ccb30bd66514d7"; + sha256 = "15wkra725r1sqzgpqgjs6shw5njlv116xinw4di9b41ih9qg98k1"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/79e7213183df892c5058a766b5805a1854bfbaec/recipes/sly"; @@ -68645,12 +68687,12 @@ spaceline = callPackage ({ cl-lib ? null, dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, powerline, s }: melpaBuild { pname = "spaceline"; - version = "20180330.1332"; + version = "20180412.526"; src = fetchFromGitHub { owner = "TheBB"; repo = "spaceline"; - rev = "efa2ebdec8bc1d8fa067f25fa54648f5a4d22aeb"; - sha256 = "1669r27rv4a7xlp2prjvl8hijnhzdw71lgsvxp65iwz7dl0912wk"; + rev = "ca85233b443216f8519c401c58af6807b6d31740"; + sha256 = "1ssbvp8xc1i7bf51rb2n0pkbhqs741dq0i0akwc3qqjg2sblckk1"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/46e4c876aeeb0bb0d0e81dcbb8363a5db9c3ff61/recipes/spaceline"; @@ -69314,6 +69356,27 @@ license = lib.licenses.free; }; }) {}; + srcery-theme = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "srcery-theme"; + version = "20180414.636"; + src = fetchFromGitHub { + owner = "roosta"; + repo = "emacs-srcery"; + rev = "6eea761e039a9511cb49b2cd3967b498b06db979"; + sha256 = "0gqh4vn8f9d1jy1z8qw6qq5lgmbqywb9nbg1c3jrffgxcn1r414b"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/1df48441ecf6abd272ff154722b9ce0e2546c284/recipes/srcery-theme"; + sha256 = "1r8srxhznli3sskwppk7fyapyx0qixagkwm0fllgsbm4nwkzq9pn"; + name = "srcery-theme"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://melpa.org/#/srcery-theme"; + license = lib.licenses.free; + }; + }) {}; srefactor = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "srefactor"; @@ -69338,12 +69401,12 @@ ssass-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ssass-mode"; - version = "20171201.509"; + version = "20180413.2303"; src = fetchFromGitHub { owner = "AdamNiederer"; repo = "ssass-mode"; - rev = "a95c4c9f99895cc582849b35e90ae13f1587ddce"; - sha256 = "1ldw72ggk22ih5j9fyb3bl0ngyfdkzfcyg97mp0mb40w8ly68qav"; + rev = "511fb0b7c41b5a479f9ea4b65f38b14454cb1401"; + sha256 = "199v7n8l9784hv2iqhqwf2na9gw20l22bf9dmi22sjmfsk8l9s7l"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/3137f98aaa871a52f477b63d9c3b7b63f7271344/recipes/ssass-mode"; @@ -69422,12 +69485,12 @@ ssh-deploy = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ssh-deploy"; - version = "20180323.2320"; + version = "20180411.2201"; src = fetchFromGitHub { owner = "cjohansson"; repo = "emacs-ssh-deploy"; - rev = "5a89d59a5371aac9ee9eae22996ae2065f7f2a6b"; - sha256 = "1zmlw75sdlvb99ijylan4bc2z2wm23x5zlql2bmjnfvjb1z2mh39"; + rev = "d0be94676f44078fd29668c6e1a790cc0cc02f88"; + sha256 = "0gc3pjzjgvznla5bl9n0yahsj8whs8jnicah5kv5zjgv99wslvb7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/ssh-deploy"; @@ -70218,12 +70281,12 @@ sunburn-theme = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "sunburn-theme"; - version = "20180317.1051"; + version = "20180414.2312"; src = fetchFromGitHub { owner = "mvarela"; repo = "Sunburn-Theme"; - rev = "63fbc5a609100e78d8304c99646ae8f689e17bf2"; - sha256 = "04dwqssci9xvcaw1wrhf45hsqskmj0s38lyc0fmbbg1vx53npnk3"; + rev = "995b389b7aa18b511718e9dcc68d7e1d9a2891a9"; + sha256 = "0skmxv4qmdncp79jd0kh5rsx7ff98r8kmzii9l9d0da3xmkvgx1d"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/bfd68b90234222dbf5907a29d506b6c4e61a372b/recipes/sunburn-theme"; @@ -70516,8 +70579,8 @@ src = fetchFromGitHub { owner = "abo-abo"; repo = "swiper"; - rev = "9c3c3822b0786ee517d9f0afdaa82245e1d1b02b"; - sha256 = "1k4lzy0a0n501d8b7y0hvz7svn894ch2nrjf6fkdgyj2dgd9bj7q"; + rev = "1181d0f7acb9e77a15fa7e62cb1027979185c853"; + sha256 = "0vsl346axdlkcv96cxlciw7bmvxwl2ficjgw9nxrsvhsjsy7md02"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e64cad81615ef3ec34fab1f438b0c55134833c97/recipes/swiper"; @@ -70659,12 +70722,12 @@ symbol-overlay = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "symbol-overlay"; - version = "20180306.648"; + version = "20180412.339"; src = fetchFromGitHub { owner = "wolray"; repo = "symbol-overlay"; - rev = "bb02b971b06fb8e612c62bd2517b49884bc603a0"; - sha256 = "18ib707rky1k5qw5m4zfd88y1lvgqfilc336ha3v88i7fz8bbzh9"; + rev = "b76f510037eb8e0ea018272495f356c71ff5b758"; + sha256 = "0dlb7rm4adm2ccqga5a1w6m2jvs4ics9ihf76hqyx4px9m9ca1ll"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c2a468ebe1a3e5a35ef40c59a62befbf8960bd7b/recipes/symbol-overlay"; @@ -70907,22 +70970,22 @@ license = lib.licenses.free; }; }) {}; - system-packages = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: + system-packages = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "system-packages"; - version = "20180405.1002"; + version = "20180415.2039"; src = fetchFromGitHub { owner = "jabranham"; repo = "system-packages"; - rev = "1470962e6675574d740508e918831f002fdf2f3e"; - sha256 = "1lbqglk02rd96vn91bakcln3pnx580k1p5zhw8m0gxmrxxzylncs"; + rev = "9e5532bbed819e6736922d2da2615a2fa4433cea"; + sha256 = "1blncv4cdf3ayq9d5ymdiacavma23smrmwh46130pscbjb4iyppy"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8c423d8c1ff251bd34df20bdb8b425c2f55ae1b1/recipes/system-packages"; sha256 = "0cq1vb4m8phdmv3c0dj6m76fss5vp1a0hikn7a1q5l2mmns40wj1"; name = "system-packages"; }; - packageRequires = [ cl-lib ]; + packageRequires = [ emacs ]; meta = { homepage = "https://melpa.org/#/system-packages"; license = lib.licenses.free; @@ -70952,12 +71015,12 @@ systemd = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "systemd"; - version = "20180101.1803"; + version = "20180414.1111"; src = fetchFromGitHub { owner = "holomorph"; repo = "systemd-mode"; - rev = "228f0b99ca3e1f3139ae8cacd15f9698d5b6da90"; - sha256 = "0cdqpzkx01qm0pk66hs6yhzv5iccrzzgfv3bh5c8i91v55d66bff"; + rev = "e97f78ee11f4d4738aaa646e48bb39565d88abd6"; + sha256 = "16ffz0m964g8j6hi1drjvzaz2nxjm1z7r1y1j0g9bmn1dksz7vl8"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/ca810e512c357d1d0130aeeb9b46b38c595e3351/recipes/systemd"; @@ -71266,12 +71329,12 @@ taskpaper-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "taskpaper-mode"; - version = "20180410.255"; + version = "20180416.754"; src = fetchFromGitHub { owner = "saf-dmitry"; repo = "taskpaper-mode"; - rev = "62f2f72bc49643b0c5d0c1b4ab9802bf05abe3a2"; - sha256 = "0y8cxh45xwzlzaxyvhjiy5az9z08gggzdp6dm5ci9q23iqwlgb6p"; + rev = "0e4f11d3aa07ea1602df0566f28bb2dc172f70f5"; + sha256 = "048hw8kbvdxihd9qsr16gzjlvjm3plvwlqb216mxbx60ig8vlhfx"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f969b1cd58dfd22041a8a2b116db0f48e321e546/recipes/taskpaper-mode"; @@ -72215,8 +72278,8 @@ src = fetchFromGitHub { owner = "apache"; repo = "thrift"; - rev = "606f1ef31447526b908244933d5b716397a6bad8"; - sha256 = "0cjwfplna5y2f5wzaqn72iagy8n52fvjvhsajzn9r6yak0bgp7zf"; + rev = "c564651dd404d7e9ff6bf7e5b343f429b9e52082"; + sha256 = "19i37mhyvg80d6j2zdxi5iljv28fbx5mjnayc6p14rqhk93xm856"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/857ab7e3a5c290265d88ebacb9685b3faee586e5/recipes/thrift"; @@ -72278,8 +72341,8 @@ src = fetchFromGitHub { owner = "tidalcycles"; repo = "Tidal"; - rev = "ef658d3df0604f3dec955a150509ec1cc68fbd98"; - sha256 = "1ild1gnbcrw830b8d3byvqlmgm27609dgailmxgin6z7g1pg4r7z"; + rev = "f8af7bdbda547ebd12cf5c0ee1327f33cd9aa93f"; + sha256 = "0y7a4bxsgpbg1sbsi4xdp4k9x3l0vh7acm5i3k87acpcpfb9aq5y"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/16a26659a16199b5bb066be6e5c4a40419bda018/recipes/tidal"; @@ -72295,12 +72358,12 @@ tide = callPackage ({ cl-lib ? null, dash, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild, s, typescript-mode }: melpaBuild { pname = "tide"; - version = "20180404.957"; + version = "20180416.755"; src = fetchFromGitHub { owner = "ananthakumaran"; repo = "tide"; - rev = "8e5db30596627ad250caab75cecf56c175f6542f"; - sha256 = "13zr8pzibpszw9rrizgkjxh9r72h7l1bw8mdk0grabdnjqzjimfi"; + rev = "e9a19bf500ee9c1a31d420055c159da44ada92db"; + sha256 = "0kfcllkkhknqx69h407v5v6b0p8g0xpd5ashh2smhz9zdnxwx1m8"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a21e063011ebbb03ac70bdcf0a379f9e383bdfab/recipes/tide"; @@ -74440,12 +74503,12 @@ uptimes = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "uptimes"; - version = "20170830.533"; + version = "20180416.623"; src = fetchFromGitHub { owner = "davep"; repo = "uptimes.el"; - rev = "c2c1b44b16a0fd873193b17c580ef3dfdacea580"; - sha256 = "1rq4m77fydkawdwkbw8125ihmvv6aisr03nwb1857k3hxhrg0gwv"; + rev = "5e81f8bb419836602819045e7d5a74b76ad3e69c"; + sha256 = "04l452k249s3ilfj0da0k7rrfyjnxxdsipa2al46xqjds8l3h2rn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/72099e35ce3e34ec6afc6a3f87a4da07ec91499a/recipes/uptimes"; @@ -76035,12 +76098,12 @@ web-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "web-mode"; - version = "20180407.300"; + version = "20180416.240"; src = fetchFromGitHub { owner = "fxbois"; repo = "web-mode"; - rev = "5de834c8f47d1c5bb427c2c1113787b66010662d"; - sha256 = "1630x09kygsm25sgbqs5612almsq77w6cs51h9768hrnvq7xgvjw"; + rev = "370fba5fefc819b863909330fa17b6b0e8b20080"; + sha256 = "0rsksx6gbff2l26rcfrxjq51pnl3l61r0vsnwq9ax70djrpk804m"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/6f0565555eaa356141422c5175d6cca4e9eb5c00/recipes/web-mode"; @@ -76539,12 +76602,12 @@ whizzml-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "whizzml-mode"; - version = "20171015.938"; + version = "20180411.1636"; src = fetchFromGitHub { owner = "whizzml"; repo = "whizzml-mode"; - rev = "9060fdce07c137abc2c494cb72641b9b9d6fbe22"; - sha256 = "10yi3n6pyqirlzxdkv7nvp0d0n1fkjrgwhn0kp5i27dnp3fi0i2b"; + rev = "cfe081c957ad6e70e1fd32c7836008851198431a"; + sha256 = "1qipmr0v6l6r2ggdp7lbrc14hwfjs6j835ii53y99knmbp7cnci1"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/11f26b15c326c3b8541bac510579b32493916042/recipes/whizzml-mode"; @@ -77004,8 +77067,8 @@ version = "20160419.1232"; src = fetchhg { url = "https://bitbucket.com/ArneBab/wisp"; - rev = "a3afe66da141"; - sha256 = "1qfhac73cbdvz1ghk9l2r1q5f1wf8msy3z8sig6pi1jawk5wb0sf"; + rev = "dbb4f5d19925"; + sha256 = "1ng4p0yf8lp3nhdz8l3m4zhl13x3bpb9prckw8nghqf2hc96l2dj"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/5b7972602399f9df9139cff177e38653bb0f43ed/recipes/wisp-mode"; @@ -77042,12 +77105,12 @@ with-editor = callPackage ({ async, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "with-editor"; - version = "20180318.1253"; + version = "20180414.757"; src = fetchFromGitHub { owner = "magit"; repo = "with-editor"; - rev = "ff3e96929d4532e33422a5980a6e3ca9f2fcf032"; - sha256 = "1fhn2wd0wszbnfpvnjmlw8gxqzy8f4q7dg7r16jpa1cmk0fpcdi0"; + rev = "ad5bb005ed3afec2d8b9b2bc1df19fb9b5e2dd84"; + sha256 = "0hq2dy8djxf45ajk9di1grhgzly0qrijcjfdah8xj5zkwvn9cvlh"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8c52c840dc35f3fd17ec660e113ddbb53aa99076/recipes/with-editor"; @@ -77651,12 +77714,12 @@ xah-fly-keys = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "xah-fly-keys"; - version = "20180407.1510"; + version = "20180412.2300"; src = fetchFromGitHub { owner = "xahlee"; repo = "xah-fly-keys"; - rev = "1cd2e0cf3f2e23f60d3c195e9bee04d94e728488"; - sha256 = "0l6bm60bv7n6sfy9v32h79hkz2s0wgmcz8lsivr2aaapaabkpvkd"; + rev = "e7181d40cc4bf30eed2672cb97255a8451031002"; + sha256 = "0lhakj8hr2wg7n3nqc5bqwgxb9lf6yvknryll9xw9lq4q9yha7rg"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/05eed39bae37cc8359d2cc678052cbbcc946e379/recipes/xah-fly-keys"; @@ -78407,12 +78470,12 @@ yankpad = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "yankpad"; - version = "20180328.532"; + version = "20180415.350"; src = fetchFromGitHub { owner = "Kungsgeten"; repo = "yankpad"; - rev = "e2ffe7d90bd5a88b794afa1b462f773d8b772db2"; - sha256 = "0a5b8bdzi0h00bk2980mp5mfm1hb7hk5i6jlijmiin89bgs19xpc"; + rev = "a804f145d17b4b68490ee62ba9a9c4fc7faad130"; + sha256 = "1m9zal19s7v6djrma1xbqwx1n271y0ik44wx9sscmrynmhdlis04"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e64746d10f9e0158621a7c4dc41dc2eca6ad573c/recipes/yankpad"; diff --git a/pkgs/applications/editors/emacs-modes/melpa-packages.nix b/pkgs/applications/editors/emacs-modes/melpa-packages.nix index 86c81cc9721e..c21db447e397 100644 --- a/pkgs/applications/editors/emacs-modes/melpa-packages.nix +++ b/pkgs/applications/editors/emacs-modes/melpa-packages.nix @@ -94,6 +94,9 @@ self: # Expects bash to be at /bin/bash flycheck-rtags = markBroken super.flycheck-rtags; + # upstream issue: missing dependency + fold-dwim-org = markBroken super.fold-dwim-org; + # build timeout graphene = markBroken super.graphene; @@ -104,9 +107,6 @@ self: helm-rtags = markBroken super.helm-rtags; # upstream issue: missing file header - helm-words = markBroken super.helm-words; - - # upstream issue: missing file header ido-complete-space-or-hyphen = markBroken super.ido-complete-space-or-hyphen; # upstream issue: missing file header @@ -149,9 +149,6 @@ self: # upstream issue: missing dependency org-readme = markBroken super.org-readme; - # upstream issue: missing file header - perl-completion = markBroken super.perl-completion; - # upstream issue: truncated file powershell = markBroken super.powershell; @@ -161,9 +158,6 @@ self: # upstream issue: missing file header qiita = markBroken super.qiita; - # upstream issue: missing file header - railgun = markBroken super.railgun; - # upstream issue: missing file footer seoul256-theme = markBroken super.seoul256-theme; @@ -198,9 +192,6 @@ self: # upstream issue: missing file header window-numbering = markBroken super.window-numbering; - # upstream issue: missing file header - zeitgeist = markBroken super.zeitgeist; - w3m = super.w3m.override (args: { melpaBuild = drv: args.melpaBuild (drv // { prePatch = diff --git a/pkgs/applications/editors/emacs-modes/melpa-stable-generated.nix b/pkgs/applications/editors/emacs-modes/melpa-stable-generated.nix index 791617c2122d..ff9967e51b35 100644 --- a/pkgs/applications/editors/emacs-modes/melpa-stable-generated.nix +++ b/pkgs/applications/editors/emacs-modes/melpa-stable-generated.nix @@ -2597,22 +2597,22 @@ license = lib.licenses.free; }; }) {}; - beeminder = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + beeminder = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild, org }: melpaBuild { pname = "beeminder"; - version = "1.0.0"; + version = "1.1.0"; src = fetchFromGitHub { owner = "Sodaware"; repo = "beeminder.el"; - rev = "54cc1277f2a7667a7b0d999dc49ceffcf2862b44"; - sha256 = "01d10algmi9a4xd7mzf7n3zxfs2qf5as66wx17mff5cd8dahxj1q"; + rev = "3e95a669474e27cd51a16caea030456377f83062"; + sha256 = "1bj9yzjvglnb0f4glh8fg478xlm5nqmd9jqm1casdj5m30i4kafn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/7fabdb05de9b8ec18a3a566f99688b50443b6b44/recipes/beeminder"; sha256 = "1cb8xmgsv23b464hpchm9f9i64p3fyf7aillrwk1aa2l1008kyww"; name = "beeminder"; }; - packageRequires = []; + packageRequires = [ org ]; meta = { homepage = "https://melpa.org/#/beeminder"; license = lib.licenses.free; @@ -6501,12 +6501,12 @@ cython-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "cython-mode"; - version = "0.28.1"; + version = "0.28.2"; src = fetchFromGitHub { owner = "cython"; repo = "cython"; - rev = "89cfbb4a3a0540abeec1703fd3ee31eba9293936"; - sha256 = "1ndabmdzqfhkg3z9zaavp5bz8l86n4g9lwi0ji0vs7q7rpsykqdw"; + rev = "93e3bb9b7558d597d10c4cb8aa1dd887ed37dc2b"; + sha256 = "1cywxcfrb2j33ncldylimqhj7r7yzlb6ghy5i8c9784vfvxd56yh"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/be9bfabe3f79153cb859efc7c3051db244a63879/recipes/cython-mode"; @@ -6611,7 +6611,7 @@ owner = "fommil"; repo = "emacs-darcula-theme"; rev = "2ecd466ffa7a3157b9ddcd7545b6fb8ad308c976"; - sha256 = "1h5lssnc1am54hkprnp61bsj5fnm8j556q2gbhljfjgrdwnqv8ky"; + sha256 = "1y8rsc63nl4n43pvn283f1vcpqyjnv6xl60fwyscwrqaz19bsnl1"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/23c8f10205187babb17e3abc3dc40eb1938e6640/recipes/darcula-theme"; @@ -6669,12 +6669,12 @@ dash = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "dash"; - version = "2.13.0"; + version = "2.14.1"; src = fetchFromGitHub { owner = "magnars"; repo = "dash.el"; - rev = "4ae329aa2160411c8b47794de067fcf29bc38a22"; - sha256 = "12gvpn0a07kgbj2lrzw1vv4njp1w4gl38rl68yh0jp3rhvacbsg0"; + rev = "a74f4cfcdc8d0642a9f602ad494f0354f27dacc9"; + sha256 = "1kzijmjxjxgr7p8clphzvmm47vczckbs8mza9an77c25bn627ywl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/57eed8767c3e98614259c408dc0b5c54d3473883/recipes/dash"; @@ -6690,12 +6690,12 @@ dash-functional = callPackage ({ dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "dash-functional"; - version = "2.13.0"; + version = "2.14.1"; src = fetchFromGitHub { owner = "magnars"; repo = "dash.el"; - rev = "4ae329aa2160411c8b47794de067fcf29bc38a22"; - sha256 = "12gvpn0a07kgbj2lrzw1vv4njp1w4gl38rl68yh0jp3rhvacbsg0"; + rev = "a74f4cfcdc8d0642a9f602ad494f0354f27dacc9"; + sha256 = "1kzijmjxjxgr7p8clphzvmm47vczckbs8mza9an77c25bn627ywl"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/57eed8767c3e98614259c408dc0b5c54d3473883/recipes/dash-functional"; @@ -7325,7 +7325,7 @@ owner = "xuhdev"; repo = "dired-icon"; rev = "dbace8d2250f84487d31b39050fcdc260fcde804"; - sha256 = "1d9105ibaw858gqp19rx2m6xm3hl57vzsmdqir883cy46qpvwhki"; + sha256 = "0r9qmr2l5kjwh1frp0k87nyaf13f7f9fjjf9yf9z92djqapfm9dd"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/8a96249947cba52cd75515b3dc83b0842fedf624/recipes/dired-icon"; @@ -7388,7 +7388,7 @@ owner = "xuhdev"; repo = "dired-quick-sort"; rev = "fe39cfb2d4a7ba6b30f98134548b4e4bac67c469"; - sha256 = "1a9r1kz5irpvb2byabbf27sy7rjzaygfpqimpag41sj955wlgy9a"; + sha256 = "014frvpszixn8cx7rdx704glmjbslv3py3kw0pb0xqf50k4scynf"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/4d278178128deb03a7b1d2e586dc38da2c7af857/recipes/dired-quick-sort"; @@ -8836,12 +8836,12 @@ ein = callPackage ({ auto-complete, cl-generic, dash, deferred, fetchFromGitHub, fetchurl, lib, melpaBuild, request, request-deferred, s, skewer-mode, websocket }: melpaBuild { pname = "ein"; - version = "0.13.0"; + version = "0.14.1"; src = fetchFromGitHub { owner = "millejoh"; repo = "emacs-ipython-notebook"; - rev = "213cea559e7a8fb50e303ea25e1626fefddaf4bd"; - sha256 = "18ysd78pfyymqd0f6ipma9p9x61pw21f0jwk118r5yi00wnry9za"; + rev = "fcf9bff0af071f5e2020ac77d9a9473325e4c5bb"; + sha256 = "1xk7k4av9hy0i7zqwpzis0rjp5myvxs52k45ah00zg8wi5hybq1x"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/215e163755fe391ce1f049622e7b9bf9a8aea95a/recipes/ein"; @@ -10298,12 +10298,12 @@ erc-hl-nicks = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "erc-hl-nicks"; - version = "1.3.2"; + version = "1.3.3"; src = fetchFromGitHub { owner = "leathekd"; repo = "erc-hl-nicks"; - rev = "be181920ce6af0ab5d00d1c638e4e598b3998643"; - sha256 = "1k0g3bwp3w0dd6zwdv6k2wpqs2krjayilrzsr1hli649ljcx55d7"; + rev = "756c4438a8245ccd3e389bf6c9850ee8453783ec"; + sha256 = "0c82rxpl5v7bbxirf1ksg06xv5xcddh8nkrpj7i6nvfarwdfnk4f"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/erc-hl-nicks"; @@ -11389,12 +11389,12 @@ evil-nerd-commenter = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "evil-nerd-commenter"; - version = "3.2.2"; + version = "3.2.3"; src = fetchFromGitHub { owner = "redguardtoo"; repo = "evil-nerd-commenter"; - rev = "8f6fafcce901a7a588f946b26d2e21c65e36e843"; - sha256 = "0pldzwvkic9ikrgzrvmcaq6y0yjplxinvyh61iqlgw2k7k8jld1f"; + rev = "34d411715ead5829d6d8969511047feb703b067e"; + sha256 = "0ax846dy2hbrbvkj7nzfkcl5i1x9rga8bvg0ln55ivhq0iiy1lkv"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/a3e1ff69e7cc95a5b5d628524ad836833f4ee736/recipes/evil-nerd-commenter"; @@ -13502,12 +13502,12 @@ flycheck-swift3 = callPackage ({ emacs, fetchFromGitHub, fetchurl, flycheck, lib, melpaBuild }: melpaBuild { pname = "flycheck-swift3"; - version = "2.0.1"; + version = "2.0.2"; src = fetchFromGitHub { owner = "GyazSquare"; repo = "flycheck-swift3"; - rev = "34973cd28ca5e63f8f6328a17fd7b78cc913b93d"; - sha256 = "1iy6j05dzpi7pi87y6rpjzmlnl2s9izqpbzknis2kx9072qddm3q"; + rev = "06a6f98d7e498860b345bbd03e96bfe59608f508"; + sha256 = "0h1n4x0fvqfb6jcapbab1ck6bj4d7irbn9zz2hxv2rlrkqxfsmh3"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f1fb8c731c118327dc0bbb726e046fec46bcfb82/recipes/flycheck-swift3"; @@ -14129,6 +14129,27 @@ license = lib.licenses.free; }; }) {}; + fold-dwim-org = callPackage ({ fetchFromGitHub, fetchurl, fold-dwim, lib, melpaBuild }: + melpaBuild { + pname = "fold-dwim-org"; + version = "0.6"; + src = fetchFromGitHub { + owner = "mattfidler"; + repo = "fold-dwim-org"; + rev = "c09bb2b46d65afbd1d0febc6fded7495be7a3037"; + sha256 = "14jvbkahwvv4wb0s9vp8gqmlpv1d4269j5rsjxn79q5pawjzslxw"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/97d22d9feaf521ce576b80d2933ecbc166c1dbe7/recipes/fold-dwim-org"; + sha256 = "0812p351rzvqcfn00k92nfhlg3y772y4z4b9f0xqnpa935y6harn"; + name = "fold-dwim-org"; + }; + packageRequires = [ fold-dwim ]; + meta = { + homepage = "https://melpa.org/#/fold-dwim-org"; + license = lib.licenses.free; + }; + }) {}; fold-this = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "fold-this"; @@ -14518,12 +14539,12 @@ futhark-mode = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "futhark-mode"; - version = "0.4.0"; + version = "0.4.1"; src = fetchFromGitHub { owner = "HIPERFIT"; repo = "futhark"; - rev = "7b3af8ea3d4985682464bfeb174376da8f90c5da"; - sha256 = "02q6gc7wj02vmxnhh58a6yy5wdjhd2fmk935dh70dl3fs0yqr52p"; + rev = "784e3147196bfe82ea9499628467335ea1d036f9"; + sha256 = "07dqqpacvap034jzvdvnpjyryzicbvjx2imnsghsxw9m52jsb9wn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/0607f01aad7e77d53595ad8db95d32acfd29b148/recipes/futhark-mode"; @@ -14641,22 +14662,22 @@ license = lib.licenses.free; }; }) {}; - gams-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + gams-mode = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "gams-mode"; - version = "6.4"; + version = "6.5"; src = fetchFromGitHub { owner = "ShiroTakeda"; repo = "gams-mode"; - rev = "2d6b5c29d84a42421ddc2f7f1e9c3a141d81c31c"; - sha256 = "0cri329g0b7ywqarg4jlmry574z7v15gdd9j7jnikq1s2jjgnb85"; + rev = "3022e9f8411628e6a210fb5843d858b15a7513f5"; + sha256 = "06hc8yy1g2vyvib8yrhwzs8fvgxnrxlw6iyzi7phjp9fgr3cp504"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c895a716636b00c2a158d33aab18f664a8601833/recipes/gams-mode"; sha256 = "0hx9mv4sqskz4nn7aks64hqd4vn3m7b34abzhy9bnmyw6d5zzfci"; name = "gams-mode"; }; - packageRequires = []; + packageRequires = [ emacs ]; meta = { homepage = "https://melpa.org/#/gams-mode"; license = lib.licenses.free; @@ -15103,7 +15124,7 @@ license = lib.licenses.free; }; }) {}; - git-commit-insert-issue = callPackage ({ bitbucket, fetchFromGitLab, fetchurl, github-issues, gitlab, helm, lib, melpaBuild, projectile, s }: + git-commit-insert-issue = callPackage ({ bitbucket, fetchFromGitLab, fetchurl, github-issues, gitlab, lib, melpaBuild, projectile, s }: melpaBuild { pname = "git-commit-insert-issue"; version = "0.3.1"; @@ -15111,14 +15132,14 @@ owner = "emacs-stuff"; repo = "git-commit-insert-issue"; rev = "5f08c17bf93b17915415d435ee41923d924fe20b"; - sha256 = "11my5apnyhdqh0pmq9wdjd1iah415a5nw87sk586cb3vxnbn5qas"; + sha256 = "1gffjf6byasisa9jdcv9n4n5zqalvzfsxv7z75zl0g3ph7wc7bbm"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/855ea20024b606314f8590129259747cac0bcc97/recipes/git-commit-insert-issue"; sha256 = "0xhlchr7dbm0hp4cjba3x1fdf7lnfc97id327i2fqgkdc4yn9fax"; name = "git-commit-insert-issue"; }; - packageRequires = [ bitbucket github-issues gitlab helm projectile s ]; + packageRequires = [ bitbucket github-issues gitlab projectile s ]; meta = { homepage = "https://melpa.org/#/git-commit-insert-issue"; license = lib.licenses.free; @@ -15552,7 +15573,7 @@ owner = "joewreschnig"; repo = "gitlab-ci-mode"; rev = "313431fa5b8b5ce4512909dfc15675bb99395f6f"; - sha256 = "0zdj3f0a5fg4vwhbv851jv4fs1dqfz2w4jsxqbri2zhzdjxc97vn"; + sha256 = "0wjz87nhcwzp201jxv3qlj88hn7p8nvq20924y06gra2d656znar"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d7915ddcf21fdec539a86bb86c209cf0bbd378cb/recipes/gitlab-ci-mode"; @@ -15573,7 +15594,7 @@ owner = "joewreschnig"; repo = "gitlab-ci-mode-flycheck"; rev = "388fd05f3ea88ed3ebafb09868fc021f6ecc7625"; - sha256 = "0idpg4265rfx5i0i8cgfs6w3gncc766mbg81ldxqjhzvq3n28z39"; + sha256 = "111clb37329c7v0lv1lwypb8bv7qb9f495f2cy45j2n711vymdna"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/d7915ddcf21fdec539a86bb86c209cf0bbd378cb/recipes/gitlab-ci-mode-flycheck"; @@ -16668,6 +16689,27 @@ license = lib.licenses.free; }; }) {}; + grep-context = callPackage ({ cl-lib ? null, dash, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "grep-context"; + version = "0.1.0"; + src = fetchFromGitHub { + owner = "mkcms"; + repo = "grep-context"; + rev = "4c63d0f2654dee1e249c2054d118d674a757bd45"; + sha256 = "0n2bc9q6bvbfpaqivp3ajy9ad1wr7hfdd98qhnspsap67p73kfn4"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/41dbaf627ae4ef86c222d2b6b5d3523fdb9a4637/recipes/grep-context"; + sha256 = "175s9asbnk2wlgpzc5izcd3vlfvdj064n38myy9qf4awn12c2y1g"; + name = "grep-context"; + }; + packageRequires = [ cl-lib dash emacs ]; + meta = { + homepage = "https://melpa.org/#/grep-context"; + license = lib.licenses.free; + }; + }) {}; grin = callPackage ({ fetchhg, fetchurl, lib, melpaBuild }: melpaBuild { pname = "grin"; version = "1.0"; @@ -17010,7 +17052,7 @@ owner = "iain"; repo = "hamburger-menu-mode"; rev = "fd37f013c2f2619a88d3ed5311a9d1308cc82614"; - sha256 = "196ydb57h4mjagjaiflvb20my561i6mdc6v6694ibdik2yns2inm"; + sha256 = "1nykpp8afa0c0wiax1qn8wf5hfjaixk5kn4yhcw40z00pb8i2z5f"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/e8017730403cc0e613e3939017f85074753c3778/recipes/hamburger-menu"; @@ -18306,12 +18348,12 @@ helm-org-rifle = callPackage ({ dash, emacs, f, fetchFromGitHub, fetchurl, helm, lib, melpaBuild, s }: melpaBuild { pname = "helm-org-rifle"; - version = "1.5.0"; + version = "1.5.1"; src = fetchFromGitHub { owner = "alphapapa"; repo = "helm-org-rifle"; - rev = "68f01726795ca3054cfc6327dcdb22c9c83dfdfa"; - sha256 = "0vak9phqgxz5dk1zj3i4cs94y797h77qadirsf33gl073cg95l8a"; + rev = "ecf5ad53bef572e38d8c8d93b516f8eab8c4dfe5"; + sha256 = "14020ws87m64bfxqw30c9hc88zb7w4kxs5svd2a10y00lgrg2m93"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/f39cc94dde5aaf0d6cfea5c98dd52cdb0bcb1615/recipes/helm-org-rifle"; @@ -19962,27 +20004,6 @@ license = lib.licenses.free; }; }) {}; - ido-ubiquitous = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, ido-completing-read-plus, lib, melpaBuild }: - melpaBuild { - pname = "ido-ubiquitous"; - version = "4.7"; - src = fetchFromGitHub { - owner = "DarwinAwardWinner"; - repo = "ido-completing-read-plus"; - rev = "51861afe385f59f3262ee40acbe772ccb3dd52e7"; - sha256 = "0hspgk8m4acyhpcldwg3xqla9xp3fjrhf37cnjp45j1b3h94x3iy"; - }; - recipeFile = fetchurl { - url = "https://raw.githubusercontent.com/milkypostman/melpa/6104efc035bcf469d133ab9a2caf42c9d4482334/recipes/ido-ubiquitous"; - sha256 = "11sdk0ymsqnsw1gycvq2wj4j0g502fp23qk6q9d95lm98nz68frz"; - name = "ido-ubiquitous"; - }; - packageRequires = [ cl-lib ido-completing-read-plus ]; - meta = { - homepage = "https://melpa.org/#/ido-ubiquitous"; - license = lib.licenses.free; - }; - }) {}; ido-vertical-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "ido-vertical-mode"; @@ -22440,12 +22461,12 @@ langtool = callPackage ({ cl-lib ? null, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "langtool"; - version = "1.6.0"; + version = "2.0.0"; src = fetchFromGitHub { owner = "mhayashi1120"; repo = "Emacs-langtool"; - rev = "d976e4f0cadb2309b798540429558936f8f45889"; - sha256 = "1qlgd5i8jngsq754jm44gb46p5y6j2cccacg72aklvwajay0adyh"; + rev = "d93286722cff3fecf8641a4a6c3b0691f30362fe"; + sha256 = "17xa055705n4jb7nafqvqgl0a6fdaxp3b3q8q0gsv5vzycsc74ga"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/503845e79e67c921f1fde31447f3dd4da2b6f993/recipes/langtool"; @@ -22487,7 +22508,7 @@ owner = "latex-math-preview"; repo = "latex-math-preview"; rev = "c1c87c4c5501f98b97af19f7e3454a2369265edc"; - sha256 = "118xrgrnwsmsysmframf6bmb0gkrdrm3jbkgivzxs41cw92fhbzw"; + sha256 = "1mp6bpl8992pi40vs6b86q922h4z8879mrjalldv5dyz57ym5fsq"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9e413b7684e9199510b00035825aa861d670e072/recipes/latex-math-preview"; @@ -23610,12 +23631,12 @@ magit-org-todos = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, magit, melpaBuild }: melpaBuild { pname = "magit-org-todos"; - version = "0.1.1"; + version = "0.1.2"; src = fetchFromGitHub { owner = "danielma"; repo = "magit-org-todos.el"; - rev = "d772f5220037cb7ad049250df2671e488c65da94"; - sha256 = "19m1p8z016mqxj2b29961rnbjclxcpspx5bkmqhrwhfysyvcjqg5"; + rev = "0bfa36bbc50e62de0a3406031cb93e2f57dcdc55"; + sha256 = "07r5x256k1fjjxs1yfg41kc94nwvnjlk2vvknkra3j8v9p0j88m7"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/84480cad490cab2f087a484ed7b9d3d3064bbd29/recipes/magit-org-todos"; @@ -26056,7 +26077,7 @@ owner = "esessoms"; repo = "nofrils-theme"; rev = "7825f88cb881a84eaa5cd1689772819a18eb2943"; - sha256 = "009did3i3i8yi0virq606l02w1mw0gdyiqablqg7m368gx0gfvh5"; + sha256 = "1aslhxk5mp6khf66ac4c441vywhiqpb4kyajagb8b1p10z8hrqva"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/c59ddaa5e41d3c25c446b1ed1905d7f88b448e0a/recipes/nofrils-acme-theme"; @@ -27318,12 +27339,12 @@ org-index = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "org-index"; - version = "5.8.7"; + version = "5.8.8"; src = fetchFromGitHub { owner = "marcihm"; repo = "org-index"; - rev = "2cbd9da2c7a6e4039e32665675370ae4e2b8e6cb"; - sha256 = "10gm329bnbzjr8d0syw90iniann46mb5mirviy9r2q9w6xqjkbd0"; + rev = "0dfe0a67979279345378ca006ab4f727df378aca"; + sha256 = "16wjzskq000grkanaw9zca2qbw9yzpndhfd2g0b0if2mf1g31mkv"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/54946e733901986304f7a7a5139b2818ebf97eb3/recipes/org-index"; @@ -31061,7 +31082,7 @@ owner = "elzair"; repo = "punctuality-logger"; rev = "708cae8e67dbae293c7c4be0ca5e49d76fac6714"; - sha256 = "1v48i37iqrrwbyy3bscicfq66vbbml4sg0f0n950bnk0qagjx8py"; + sha256 = "1bkkgs2agy00wivilljkj3a9fsb2ba935icjmhbk46zjc6yf3y6q"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/76ac7178ee5381e08ae881f3fc6061106eeb1c1d/recipes/punctuality-logger"; @@ -31418,7 +31439,7 @@ owner = "python-mode-devs"; repo = "python-mode"; rev = "a0a534639bc6142c2c2f44bd7ca5878ad5f79518"; - sha256 = "0sj2hfjwpcdg9djsgl3y5aa3gnvl4s87477x6a9d14m11db3p7ml"; + sha256 = "173i3k0nvjri1g1mkgkc2i9c9mpnsvxf1ldmm12yhadl5gl2ah07"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/82861e1ab114451af5e1106d53195afd3605448a/recipes/python-mode"; @@ -31543,6 +31564,27 @@ license = lib.licenses.free; }; }) {}; + ql = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "ql"; + version = "1.0"; + src = fetchFromGitHub { + owner = "ieure"; + repo = "ql-el"; + rev = "c885d125d8972374b408f6eddf031e44dc6fa0c6"; + sha256 = "1l1jdvz1913m03ikcf9g3dsraaajqac1kzfy9c9xhzx8w7bbl80c"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/475bd8fd66c6d5b5c7e74aa2c4e094d313cc8303/recipes/ql"; + sha256 = "0wxjblqacs5nx2hyh7r6rlv1yngbhn6phn5rni4dw2dms98zj34z"; + name = "ql"; + }; + packageRequires = [ emacs ]; + meta = { + homepage = "https://melpa.org/#/ql"; + license = lib.licenses.free; + }; + }) {}; qml-mode = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "qml-mode"; @@ -32539,12 +32581,12 @@ rg = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "rg"; - version = "1.4.3"; + version = "1.5.0"; src = fetchFromGitHub { owner = "dajva"; repo = "rg.el"; - rev = "63226e8c93e55538855c9b24bfa03c86dc23b79d"; - sha256 = "1zzh2cf6lsrsh6nzlcfxqs4il9dw5fc70x5apvrvp08mpqdzcj1r"; + rev = "d50bd106275f3ef7f77d0147857412fb065eef47"; + sha256 = "0zjhak534j1n03z6p9wjmgc48yy40icrp2x8y9vbvg4hgx8xh9lm"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/9ce1f721867383a841957370946f283f996fa76f/recipes/rg"; @@ -33941,7 +33983,7 @@ license = lib.licenses.free; }; }) {}; - shrink-path = callPackage ({ dash, f, fetchFromGitLab, fetchurl, lib, melpaBuild, s }: + shrink-path = callPackage ({ dash, emacs, f, fetchFromGitLab, fetchurl, lib, melpaBuild, s }: melpaBuild { pname = "shrink-path"; version = "0.3.1"; @@ -33949,14 +33991,14 @@ owner = "bennya"; repo = "shrink-path.el"; rev = "9b8cfb59a2dcee8b39b680ab9adad5ecb1f53c0b"; - sha256 = "0kx0c4syd7k6ff9j463bib32pz4wq0rzjlg6b0yqnymlzfr1mbki"; + sha256 = "021bpgpzysag1s11m9pyq2bk6a0mf9ayx10yxhf5cw56x3d0jj1b"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/86b0d105e8a57d5f0bcde779441dc80b85e170ea/recipes/shrink-path"; sha256 = "0fq13c6g7qbq6f2ry9dzdyg1f6p41wimkjcdaj177rnilz77alzb"; name = "shrink-path"; }; - packageRequires = [ dash f s ]; + packageRequires = [ dash emacs f s ]; meta = { homepage = "https://melpa.org/#/shrink-path"; license = lib.licenses.free; @@ -35327,6 +35369,27 @@ license = lib.licenses.free; }; }) {}; + srcery-theme = callPackage ({ fetchFromGitHub, fetchurl, lib, melpaBuild }: + melpaBuild { + pname = "srcery-theme"; + version = "0.1.0"; + src = fetchFromGitHub { + owner = "roosta"; + repo = "emacs-srcery"; + rev = "385809e78a2494ee617782430415048d91a11444"; + sha256 = "1r6k042jipqz04nlr9gfpq6p80k33k4aqxsn03p1sicnpakzpixg"; + }; + recipeFile = fetchurl { + url = "https://raw.githubusercontent.com/milkypostman/melpa/1df48441ecf6abd272ff154722b9ce0e2546c284/recipes/srcery-theme"; + sha256 = "1r8srxhznli3sskwppk7fyapyx0qixagkwm0fllgsbm4nwkzq9pn"; + name = "srcery-theme"; + }; + packageRequires = []; + meta = { + homepage = "https://melpa.org/#/srcery-theme"; + license = lib.licenses.free; + }; + }) {}; srefactor = callPackage ({ emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "srefactor"; @@ -36861,12 +36924,12 @@ tidal = callPackage ({ emacs, fetchFromGitHub, fetchurl, haskell-mode, lib, melpaBuild }: melpaBuild { pname = "tidal"; - version = "0.9.7"; + version = "0.9.8"; src = fetchFromGitHub { owner = "tidalcycles"; repo = "Tidal"; - rev = "ef658d3df0604f3dec955a150509ec1cc68fbd98"; - sha256 = "1ild1gnbcrw830b8d3byvqlmgm27609dgailmxgin6z7g1pg4r7z"; + rev = "f8af7bdbda547ebd12cf5c0ee1327f33cd9aa93f"; + sha256 = "0y7a4bxsgpbg1sbsi4xdp4k9x3l0vh7acm5i3k87acpcpfb9aq5y"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/16a26659a16199b5bb066be6e5c4a40419bda018/recipes/tidal"; @@ -37769,12 +37832,12 @@ uptimes = callPackage ({ cl-lib ? null, emacs, fetchFromGitHub, fetchurl, lib, melpaBuild }: melpaBuild { pname = "uptimes"; - version = "3.5"; + version = "3.6"; src = fetchFromGitHub { owner = "davep"; repo = "uptimes.el"; - rev = "07bcd6517243c9c9f61172202d33718bd9b2a850"; - sha256 = "0n416p47j4cl84lq8wcgmkagkws7a9n4g9307v1s91s2gqmfia3n"; + rev = "5e81f8bb419836602819045e7d5a74b76ad3e69c"; + sha256 = "04l452k249s3ilfj0da0k7rrfyjnxxdsipa2al46xqjds8l3h2rn"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/72099e35ce3e34ec6afc6a3f87a4da07ec91499a/recipes/uptimes"; @@ -38173,7 +38236,7 @@ owner = "iankelling"; repo = "visible-mark"; rev = "c1852e13b6b61982738b56977a452ec9026faf1b"; - sha256 = "15zdbvv6c114mv6hdq375l7ax70sss06p9d7m86hgssc3kiv9vsv"; + sha256 = "1rsi9irv9i03627cmfaqz03f9cvpm7555ga8n2gs622lzp6bb3jf"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/76ac7178ee5381e08ae881f3fc6061106eeb1c1d/recipes/visible-mark"; @@ -40217,7 +40280,7 @@ owner = "egh"; repo = "zotxt-emacs"; rev = "43c0c6d23b31126bac6b14bb85608180fd9c866f"; - sha256 = "0qksa67aazs9vx7v14nlakr34z6l0h6mhfzi2c0vhrr0c210r6hp"; + sha256 = "1hz1m4190yi6knz3y088ql8wy3pmsl8lsznqby2vpnn9p74fvl37"; }; recipeFile = fetchurl { url = "https://raw.githubusercontent.com/milkypostman/melpa/b633453e77a719f6b6b6564e66c1c1260db38aa6/recipes/zotxt"; diff --git a/pkgs/applications/editors/emacs-modes/melpa-stable-packages.nix b/pkgs/applications/editors/emacs-modes/melpa-stable-packages.nix index 7592fdbcae11..33473ecad3f0 100644 --- a/pkgs/applications/editors/emacs-modes/melpa-stable-packages.nix +++ b/pkgs/applications/editors/emacs-modes/melpa-stable-packages.nix @@ -96,6 +96,9 @@ self: # Expects bash to be at /bin/bash flycheck-rtags = markBroken super.flycheck-rtags; + # upstream issue: missing dependency + fold-dwim-org = markBroken super.fold-dwim-org; + # build timeout graphene = markBroken super.graphene; diff --git a/pkgs/applications/editors/emacs-modes/org-generated.nix b/pkgs/applications/editors/emacs-modes/org-generated.nix index 2cf2c50bf714..c0223e17a567 100644 --- a/pkgs/applications/editors/emacs-modes/org-generated.nix +++ b/pkgs/applications/editors/emacs-modes/org-generated.nix @@ -1,10 +1,10 @@ { callPackage }: { org = callPackage ({ elpaBuild, fetchurl, lib }: elpaBuild { pname = "org"; - version = "20180409"; + version = "20180416"; src = fetchurl { - url = "https://orgmode.org/elpa/org-20180409.tar"; - sha256 = "0vnyh30pqnpfwmkm2gmidw00mgrwsbvxmjv40yhrv7144392iisl"; + url = "https://orgmode.org/elpa/org-20180416.tar"; + sha256 = "05rbkrs93zd9kvldwvypb8fwwaysajy5n7b2k9c8xm2cx2nayv8m"; }; packageRequires = []; meta = { @@ -14,10 +14,10 @@ }) {}; org-plus-contrib = callPackage ({ elpaBuild, fetchurl, lib }: elpaBuild { pname = "org-plus-contrib"; - version = "20180409"; + version = "20180416"; src = fetchurl { - url = "https://orgmode.org/elpa/org-plus-contrib-20180409.tar"; - sha256 = "18zb6vx06gwxgy85a5fmvjwb8fqb4cn74n1mfk64p3acnsnwikkg"; + url = "https://orgmode.org/elpa/org-plus-contrib-20180416.tar"; + sha256 = "1f5zdfsa1fcf66hk3w57wh5385069yg0b86h57jgkcbmxkcmj6ij"; }; packageRequires = []; meta = { diff --git a/pkgs/applications/editors/focuswriter/default.nix b/pkgs/applications/editors/focuswriter/default.nix index 0e4a6a5bf207..b01532ae2881 100644 --- a/pkgs/applications/editors/focuswriter/default.nix +++ b/pkgs/applications/editors/focuswriter/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "focuswriter-${version}"; - version = "1.6.11"; + version = "1.6.12"; src = fetchurl { url = "https://gottcode.org/focuswriter/focuswriter-${version}-src.tar.bz2"; - sha256 = "0izbsm2vx24pnd92gf7ky8x47g324a8d16hy1s8kk3x1inxd80z1"; + sha256 = "0vcr9dhfsdls2x493klv7w5kn08iqqfg2jwjcbz274mcnd07bpqj"; }; nativeBuildInputs = [ pkgconfig qmake qttools ]; diff --git a/pkgs/applications/editors/ghostwriter/default.nix b/pkgs/applications/editors/ghostwriter/default.nix index aeae711c1c0f..7a0399ea0f84 100644 --- a/pkgs/applications/editors/ghostwriter/default.nix +++ b/pkgs/applications/editors/ghostwriter/default.nix @@ -2,14 +2,14 @@ stdenv.mkDerivation rec { pname = "ghostwriter"; - version = "1.6.1"; + version = "1.6.2"; name = "${pname}-${version}"; src = fetchFromGitHub { owner = "wereturtle"; repo = pname; rev = "v${version}"; - sha256 = "1ihdr4xk0j83q83xknbikxb7yf9qhlkgvc89w33lhj090cv376gd"; + sha256 = "0251563zy0q69fzfacvalpx43y15cshb0bhshyd4w37061gh1c12"; }; nativeBuildInputs = [ qmake pkgconfig ]; diff --git a/pkgs/applications/kde/okteta.nix b/pkgs/applications/editors/okteta/default.nix index 0ac8ddebc75d..770eb63dc69e 100644 --- a/pkgs/applications/kde/okteta.nix +++ b/pkgs/applications/editors/okteta/default.nix @@ -1,16 +1,22 @@ { - mkDerivation, lib, + mkDerivation, lib, fetchurl, extra-cmake-modules, kdoctools, qtscript, kconfig, kinit, karchive, kcrash, kcmutils, kconfigwidgets, knewstuff, kparts, qca-qt5, shared-mime-info }: -mkDerivation { +let + version = "17.12.3"; +in mkDerivation rec { name = "okteta"; + src = fetchurl { + url = "mirror://kde/stable/applications/${version}/src/${name}-${version}.tar.xz"; + sha256 = "03wsv83l1cay2dpcsksad124wzan7kh8zxdw1h0yicn398kdbck4"; + }; meta = { license = with lib.licenses; [ gpl2 ]; - maintainers = with lib.maintainers; [ peterhoeg ]; + maintainers = with lib.maintainers; [ peterhoeg bkchr ]; }; nativeBuildInputs = [ qtscript extra-cmake-modules kdoctools ]; buildInputs = [ shared-mime-info ]; diff --git a/pkgs/applications/editors/rstudio/default.nix b/pkgs/applications/editors/rstudio/default.nix index 6b7881c490cf..0943513a4d12 100644 --- a/pkgs/applications/editors/rstudio/default.nix +++ b/pkgs/applications/editors/rstudio/default.nix @@ -6,7 +6,7 @@ let verMajor = "1"; verMinor = "1"; - verPatch = "423"; + verPatch = "442"; version = "${verMajor}.${verMinor}.${verPatch}"; ginVer = "1.5"; gwtVer = "2.7.0"; @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { owner = "rstudio"; repo = "rstudio"; rev = "v${version}"; - sha256 = "02kpmzh0vr0gb5dhiwcm4gwjbc3biwz0km655mgzmx9j64cyd3nf"; + sha256 = "0drqh2brfs9w8dfh4r7j3fsqdsg63s6pvj2bbg5xwwc0yf220ahs"; }; # Hack RStudio to only use the input R. diff --git a/pkgs/applications/editors/sublime/3/packages.nix b/pkgs/applications/editors/sublime/3/packages.nix index 84394e85c885..01445ade4732 100644 --- a/pkgs/applications/editors/sublime/3/packages.nix +++ b/pkgs/applications/editors/sublime/3/packages.nix @@ -5,14 +5,14 @@ let in rec { sublime3-dev = common { - buildVersion = "3161"; - x32sha256 = "0qrm2qmfsj71lr83c8zas2n3xk8hk9k4w8ygnasjhggmyjm3wy0q"; - x64sha256 = "0cgadylm68s2jly10r038q1fvmbzmpc2nvqy86vlyq9avgqbm5pc"; + buildVersion = "3162"; + x32sha256 = "190il02hqvv64w17w7xc1fz2wkbhk5a5y96jb25dvafmslm46d4i"; + x64sha256 = "1nsjhjs6zajhx7m3dk7i450krg6pb03zffm1n3m1v0xb9zr37xz3"; } {}; sublime3 = common { buildVersion = "3143"; x32sha256 = "0dgpx4wij2m77f478p746qadavab172166bghxmj7fb61nvw9v5i"; - x64sha256 = "06b554d2cvpxc976rvh89ix3kqc7klnngvk070xrs8wbyb221qcw"; + x64sha256 = "06b554d2cvpxc976rvh89ix3kqc7klnngvk070xrs8wbyb221qcw"; } {}; } diff --git a/pkgs/applications/editors/vim/configurable.nix b/pkgs/applications/editors/vim/configurable.nix index 0f81b0bdd640..9ffa31f2f2e0 100644 --- a/pkgs/applications/editors/vim/configurable.nix +++ b/pkgs/applications/editors/vim/configurable.nix @@ -4,6 +4,7 @@ args@{ source ? "default", callPackage, fetchurl, stdenv, ncurses, pkgconfig, ge , composableDerivation, writeText, lib, config, glib, gtk2, gtk3, python, perl, tcl, ruby , libX11, libXext, libSM, libXpm, libXt, libXaw, libXau, libXmu , libICE +, vimPlugins # apple frameworks , CoreServices, CoreData, Cocoa, Foundation, libobjc, cf-private @@ -80,6 +81,11 @@ composableDerivation { flags = { ftNix = { patches = [ ./ft-nix-support.patch ]; + preConfigure = '' + cp ${vimPlugins.vim-nix.src}/ftplugin/nix.vim runtime/ftplugin/nix.vim + cp ${vimPlugins.vim-nix.src}/indent/nix.vim runtime/indent/nix.vim + cp ${vimPlugins.vim-nix.src}/syntax/nix.vim runtime/syntax/nix.vim + ''; }; } // edf { diff --git a/pkgs/applications/editors/vim/ft-nix-support.patch b/pkgs/applications/editors/vim/ft-nix-support.patch index 416ec18cf2ca..274d855731fd 100644 --- a/pkgs/applications/editors/vim/ft-nix-support.patch +++ b/pkgs/applications/editors/vim/ft-nix-support.patch @@ -6,7 +6,7 @@ index a8e6261..2b008fc 100644 " Z80 assembler asz80 au BufNewFile,BufRead *.z8a setf z8a -+" NIX ++" Nix +au BufNewFile,BufRead *.nix setf nix + augroup END @@ -18,72 +18,3 @@ index a8e6261..2b008fc 100644 unlet s:cpo_save + + -diff --git a/runtime/syntax/nix.vim b/runtime/syntax/nix.vim -new file mode 100644 -index 0000000..a2f9918 ---- /dev/null -+++ b/runtime/syntax/nix.vim -@@ -0,0 +1,56 @@ -+" Vim syntax file -+" Language: nix -+" Maintainer: Marc Weber <marco-oweber@gmx.de> -+" Modify and commit if you feel that way -+" Last Change: 2011 Jun -+" -+" this syntax file can be still be enhanced very much.. -+" Don't ask, do it :-) -+" This file (github.com/MarcWeber/vim-addon-nix) is periodically synced with -+" the patch found in vim_configurable (nixpkgs) -+ -+" Quit when a (custom) syntax file was already loaded -+if exists("b:current_syntax") -+ finish -+endif -+ -+ -+sy cluster nixStrings contains=nixStringParam,nixStringIndented -+ -+syn keyword nixKeyword let throw inherit import true false null with -+syn keyword nixConditional if else then -+syn keyword nixBrace ( ) { } = -+syn keyword nixBuiltin __currentSystem __currentTime __isFunction __getEnv __trace __toPath __pathExists -+ \ __readFile __toXML __toFile __filterSource __attrNames __getAttr __hasAttr __isAttrs __listToAttrs __isList -+ \ __head __tail __add __sub __lessThan __substring __stringLength -+ -+syn region nixStringIndented start=+''+ skip=+'''\|''${\|"+ end=+''+ contains=nixStringParam -+" syn region nixString start=+"+ skip=+\\"+ end=+"+ -+syn match nixAttr "\w\+\ze\s*=" -+syn match nixFuncArg "\zs\w\+\ze\s*:" -+syn region nixStringParam start=+\${+ end=+}+ contains=@nixStrings -+syn region nixMultiLineComment start=+/\*+ skip=+\\"+ end=+\*/+ -+syn match nixEndOfLineComment "#.*$" -+ -+hi def link nixKeyword Keyword -+hi def link nixConditional Conditional -+hi def link nixBrace Special -+hi def link nixString String -+hi def link nixStringIndented String -+hi def link nixBuiltin Special -+hi def link nixStringParam Macro -+hi def link nixMultiLineComment Comment -+hi def link nixEndOfLineComment Comment -+hi def link nixAttr Identifier -+hi def link nixFuncArg Identifier -+ -+syn sync maxlines=20000 -+syn sync minlines=50000 -+ -+let b:current_syntax = "nix" -+ -+" thanks to domenkozar -+" scan backwards to find begining of multiline statements -+syn sync ccomment nixMultiLineComment minlines=10 maxlines=500 -+syn sync ccomment nixStringIndented minlines=10 maxlines=500 -+syn sync ccomment nixString maxlines=10 -diff --git a/runtime/ftplugin/nix.vim b/runtime/ftplugin/nix.vim -new file mode 100644 ---- /dev/null -+++ b/runtime/ftplugin/nix.vim -@@ -0,0 +1,2 @@ -+" coding conventions -+setlocal sw=2 ts=2 expandtab diff --git a/pkgs/applications/editors/vscode/default.nix b/pkgs/applications/editors/vscode/default.nix index 7a6fa1961e20..5c10f6fb3bbc 100644 --- a/pkgs/applications/editors/vscode/default.nix +++ b/pkgs/applications/editors/vscode/default.nix @@ -2,7 +2,7 @@ makeWrapper, libXScrnSaver, libxkbfile, libsecret }: let - version = "1.22.1"; + version = "1.22.2"; channel = "stable"; plat = { @@ -12,9 +12,9 @@ let }.${stdenv.system}; sha256 = { - "i686-linux" = "1w1ywf21vcwmfq5ngag1y076nxbdqg3qav90ilxgd3dkv5j6fkjr"; - "x86_64-linux" = "14phpsrkkv09dgr7phqhgjzfhm3zzbh3w2yhyng0cj3vwzysikcs"; - "x86_64-darwin" = "0fqsr4ramanl7v1damf01zkmg75s9nlfkj6298h9sjvhc93pfcll"; + "i686-linux" = "17iqqg6vdccbl1k4k2ks3kkgg7619j6qdvca4k27pjfqm17mvw5n"; + "x86_64-linux" = "1ng2jhhaghsf7a2dmrimazh817jh0ag88whija179ywgrg3i6xam"; + "x86_64-darwin" = "083hizigzxm45hcy6yqwznj9ibqdaxg2xv8rsyas4ig9x55irrcj"; }.${stdenv.system}; archive_fmt = if stdenv.system == "x86_64-darwin" then "zip" else "tar.gz"; diff --git a/pkgs/applications/editors/vscode-with-extensions/default.nix b/pkgs/applications/editors/vscode/with-extensions.nix index c54c8a4277f1..c54c8a4277f1 100644 --- a/pkgs/applications/editors/vscode-with-extensions/default.nix +++ b/pkgs/applications/editors/vscode/with-extensions.nix diff --git a/pkgs/applications/gis/grass/default.nix b/pkgs/applications/gis/grass/default.nix index 8353bce1b847..b2404df8e56e 100644 --- a/pkgs/applications/gis/grass/default.nix +++ b/pkgs/applications/gis/grass/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, flex, bison, pkgconfig, zlib, libtiff, libpng, fftw , cairo, readline, ffmpeg, makeWrapper, wxGTK30, netcdf, blas -, proj, gdal, geos, sqlite, postgresql, mysql, python2Packages +, proj, gdal, geos, sqlite, postgresql, mysql, python2Packages, libLAS }: stdenv.mkDerivation { @@ -12,7 +12,8 @@ stdenv.mkDerivation { nativeBuildInputs = [ pkgconfig ]; buildInputs = [ flex bison zlib proj gdal libtiff libpng fftw sqlite cairo - readline ffmpeg makeWrapper wxGTK30 netcdf geos postgresql mysql.connector-c blas ] + readline ffmpeg makeWrapper wxGTK30 netcdf geos postgresql mysql.connector-c blas + libLAS ] ++ (with python2Packages; [ python dateutil wxPython30 numpy ]); # On Darwin the installer tries to symlink the help files into a system @@ -33,8 +34,12 @@ stdenv.mkDerivation { "--with-mysql-includes=${mysql.connector-c}/include/mysql" "--with-mysql-libs=${mysql.connector-c}/lib/mysql" "--with-blas" + "--with-liblas=${libLAS}/bin/liblas-config" ]; + # Otherwise a very confusing "Can't load GDAL library" error + makeFlags = stdenv.lib.optional stdenv.isDarwin "GDAL_DYNAMIC="; + /* Ensures that the python script run at build time are actually executable; * otherwise, patchShebangs ignores them. */ postConfigure = '' @@ -73,6 +78,7 @@ stdenv.mkDerivation { --set GRASS_PYTHON ${python2Packages.python}/bin/${python2Packages.python.executable} \ --suffix LD_LIBRARY_PATH ':' '${gdal}/lib' ln -s $out/grass-*/lib $out/lib + ln -s $out/grass-*/include $out/include ''; enableParallelBuilding = true; @@ -82,5 +88,6 @@ stdenv.mkDerivation { description = "GIS software suite used for geospatial data management and analysis, image processing, graphics and maps production, spatial modeling, and visualization"; license = stdenv.lib.licenses.gpl2Plus; platforms = stdenv.lib.platforms.all; + maintainers = with stdenv.lib.maintainers; [mpickering]; }; } diff --git a/pkgs/applications/gis/qgis/default.nix b/pkgs/applications/gis/qgis/default.nix index 75f980c6781b..896387b1f7f4 100644 --- a/pkgs/applications/gis/qgis/default.nix +++ b/pkgs/applications/gis/qgis/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, fetchpatch, gdal, cmake, qt4, flex, bison, proj, geos, xlibsWrapper, sqlite, gsl , qwt, fcgi, python2Packages, libspatialindex, libspatialite, qscintilla, postgresql, makeWrapper , qjson, qca2, txt2tags, openssl, darwin, pkgconfig -, withGrass ? false, grass, IOKit, ApplicationServices +, withGrass ? true, grass, IOKit, ApplicationServices }: stdenv.mkDerivation rec { @@ -58,11 +58,13 @@ stdenv.mkDerivation rec { '') + (stdenv.lib.optionalString stdenv.isDarwin '' # Necessary for QGIS to find the correct default GRASS path + # Plugins look for gdal tools like deminfo on the PATH ${stdenv.lib.optionalString withGrass "ln -sf ${grass} $out/QGIS.app/Contents/MacOS/grass"} for file in $(find $out -type f -name "QGIS"); do wrapProgram "$file" \ --prefix DYLD_LIBRARY_PATH : "${qwt}/lib" \ --prefix DYLD_LIBRARY_PATH : "${qscintilla}/lib" \ + --prefix PATH : "${gdal}/bin" \ ${stdenv.lib.optionalString withGrass "--prefix PATH : ${grass}/bin"} \ --set PYTHONPATH $PYTHONPATH done @@ -75,6 +77,6 @@ stdenv.mkDerivation rec { homepage = http://www.qgis.org; license = stdenv.lib.licenses.gpl2Plus; platforms = with stdenv.lib.platforms; unix; - maintainers = with stdenv.lib.maintainers; [viric]; + maintainers = with stdenv.lib.maintainers; [viric mpickering]; }; } diff --git a/pkgs/applications/graphics/ImageMagick/default.nix b/pkgs/applications/graphics/ImageMagick/default.nix index be3a369c28b6..4bbc34bb7bb6 100644 --- a/pkgs/applications/graphics/ImageMagick/default.nix +++ b/pkgs/applications/graphics/ImageMagick/default.nix @@ -38,7 +38,7 @@ stdenv.mkDerivation rec { src = fetchFromGitHub { owner = "ImageMagick"; - repo = "ImageMagick"; + repo = "ImageMagick6"; rev = cfg.version; inherit (cfg) sha256; }; diff --git a/pkgs/applications/graphics/ao/default.nix b/pkgs/applications/graphics/ao/default.nix index d415df1bae80..f51777bdbf73 100644 --- a/pkgs/applications/graphics/ao/default.nix +++ b/pkgs/applications/graphics/ao/default.nix @@ -36,5 +36,6 @@ stdenv.mkDerivation rec { license = stdenv.lib.licenses.gpl2Plus ; # Some parts can be extracted and used under LGPL2+ maintainers = [stdenv.lib.maintainers.raskin]; platforms = stdenv.lib.platforms.linux; + broken = true; # 2018-04-10 }; } diff --git a/pkgs/applications/graphics/c3d/default.nix b/pkgs/applications/graphics/c3d/default.nix index 74631e88ebfb..7e1c6d7c8c4b 100644 --- a/pkgs/applications/graphics/c3d/default.nix +++ b/pkgs/applications/graphics/c3d/default.nix @@ -3,12 +3,12 @@ stdenv.mkDerivation rec { name = "${pname}-${version}"; pname = "c3d"; - version = "1.1.0"; + version = "2018-10-04"; src = fetchgit { url = "https://git.code.sf.net/p/c3d/git"; - rev = "3453f6133f0df831dcbb0d0cfbd8b26e121eb153"; - sha256 = "1xgbk20w22jwvf7pa0n4lcbyx35fq56zzlslj0nvcclh6vx0b4z8"; + rev = "351929a582b2ef68fb9902df0b11d38f44a0ccd0"; + sha256 = "0mpv4yl6hdnxgvnwrmd182h64n3ppp30ldzm0jz6jglk0nvpzq9w"; }; nativeBuildInputs = [ cmake ]; @@ -21,5 +21,6 @@ stdenv.mkDerivation rec { maintainers = with maintainers; [ bcdarwin ]; platforms = platforms.unix; license = licenses.gpl2; + broken = true; }; } diff --git a/pkgs/applications/graphics/dosage/default.nix b/pkgs/applications/graphics/dosage/default.nix new file mode 100644 index 000000000000..f95370e39e72 --- /dev/null +++ b/pkgs/applications/graphics/dosage/default.nix @@ -0,0 +1,28 @@ +{ stdenv, pythonPackages, fetchFromGitHub }: + +pythonPackages.buildPythonApplication rec { + name = "${pname}-${version}"; + pname = "dosage"; + version = "2018.04.08"; + PBR_VERSION = version; + + src = fetchFromGitHub { + owner = "webcomics"; + repo = "dosage"; + rev = "b2fdc13feb65b93762928f7e99bac7b1b7b31591"; + sha256 = "1p6vllqaf9s6crj47xqp97hkglch1kd4y8y4lxvzx3g2shhhk9hh"; + }; + buildInputs = with pythonPackages; [ pytest responses ]; + propagatedBuildInputs = with pythonPackages; [ colorama lxml requests pbr ]; + + disabled = pythonPackages.pythonOlder "3.3"; + + checkPhase = '' + py.test tests/ + ''; + + meta = { + description = "A comic strip downloader and archiver"; + homepage = http://dosage.rocks/; + }; +} diff --git a/pkgs/applications/graphics/feh/default.nix b/pkgs/applications/graphics/feh/default.nix index d7f25fdd4261..475c8de97b91 100644 --- a/pkgs/applications/graphics/feh/default.nix +++ b/pkgs/applications/graphics/feh/default.nix @@ -6,11 +6,11 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "feh-${version}"; - version = "2.25.1"; + version = "2.26"; src = fetchurl { url = "https://feh.finalrewind.org/${name}.tar.bz2"; - sha256 = "197sm78bm33dvahr5nxqkbmpmdn4b13ahc9mrgn1l7n104bg4phc"; + sha256 = "11kckzwk3b734l0n4j41k40liq1v2lbbj1gzir5qc386g7fvzmmi"; }; outputs = [ "out" "man" "doc" ]; diff --git a/pkgs/applications/graphics/fstl/default.nix b/pkgs/applications/graphics/fstl/default.nix new file mode 100644 index 000000000000..355acf7681a0 --- /dev/null +++ b/pkgs/applications/graphics/fstl/default.nix @@ -0,0 +1,35 @@ +{stdenv, fetchFromGitHub, qtbase, mesa_glu, qmake}: +stdenv.mkDerivation rec { + name = "fstl-${version}"; + version = "0.9.3"; + + buildInputs = [qtbase mesa_glu]; + + prePatch = '' + sed -i "s|/usr/bin|$out/bin|g" qt/fstl.pro + ''; + + preBuild = '' + qmake qt/fstl.pro + ''; + + postInstall = stdenv.lib.optionalString stdenv.isDarwin '' + mkdir -p $out/Applications + mv fstl.app $out/Applications + ''; + + src = fetchFromGitHub { + owner = "mkeeter"; + repo = "fstl"; + rev = "v" + version; + sha256 = "1j0y9xbf0ybrrnsmfzgpyyz6bi98xgzn9ivani424j01vffns892"; + }; + + meta = with stdenv.lib; { + description = "The fastest STL file viewer"; + homepage = "https://github.com/mkeeter/fstl"; + license = licenses.mit; + platforms = platforms.linux ++ platforms.darwin; + maintainers = with maintainers; [ tweber ]; + }; +} diff --git a/pkgs/applications/graphics/inkscape/default.nix b/pkgs/applications/graphics/inkscape/default.nix index 47452eb43e88..37af9f6b86c7 100644 --- a/pkgs/applications/graphics/inkscape/default.nix +++ b/pkgs/applications/graphics/inkscape/default.nix @@ -2,9 +2,16 @@ , libpng, zlib, popt, boehmgc, libxml2, libxslt, glib, gtkmm2 , glibmm, libsigcxx, lcms, boost, gettext, makeWrapper , gsl, python2, poppler, imagemagick, libwpg, librevenge -, libvisio, libcdr, libexif, potrace, cmake +, libvisio, libcdr, libexif, potrace, autoreconfHook +, intltool +, icu # Not needed for building with CMake +, lib }: +# Note that originally this Nix expression used CMake to build but +# this led to errors on MacOS of "Too many arguments". Inkscape +# supports autoconf and we will use this for now on. + let python2Env = python2.withPackages(ps: with ps; [ numpy lxml ]); in @@ -17,41 +24,43 @@ stdenv.mkDerivation rec { sha256 = "1chng2yw8dsjxc9gf92aqv7plj11cav8ax321wmakmv5bb09cch6"; }; - unpackPhase = '' - cp $src ${name}.tar.bz2 - tar xvjf ${name}.tar.bz2 > /dev/null - cd ${name} - ''; - postPatch = '' patchShebangs share/extensions patchShebangs fix-roff-punct + # XXX: Not needed for CMake: + patchShebangs share/filters + patchShebangs share/palettes + patchShebangs share/patterns + patchShebangs share/symbols + patchShebangs share/templates + # Python is used at run-time to execute scripts, e.g., those from # the "Effects" menu. substituteInPlace src/extension/implementation/script.cpp \ --replace '"python-interpreter", "python"' '"python-interpreter", "${python2Env}/bin/python"' ''; - nativeBuildInputs = [ pkgconfig ]; + nativeBuildInputs = [ pkgconfig autoreconfHook intltool ]; buildInputs = [ perl perlXMLParser libXft libpng zlib popt boehmgc libxml2 libxslt glib gtkmm2 glibmm libsigcxx lcms boost gettext makeWrapper gsl poppler imagemagick libwpg librevenge - libvisio libcdr libexif potrace cmake python2Env + libvisio libcdr libexif potrace python2Env icu ]; enableParallelBuilding = true; + preConfigure = '' + intltoolize -f + ''; + postInstall = '' # Make sure PyXML modules can be found at run-time. rm "$out/share/icons/hicolor/icon-theme.cache" - '' + stdenv.lib.optionalString stdenv.isDarwin '' - install_name_tool -change $out/lib/libinkscape_base.dylib $out/lib/inkscape/libinkscape_base.dylib $out/bin/inkscape - install_name_tool -change $out/lib/libinkscape_base.dylib $out/lib/inkscape/libinkscape_base.dylib $out/bin/inkview ''; - meta = with stdenv.lib; { + meta = with lib; { license = "GPL"; homepage = https://www.inkscape.org; description = "Vector graphics editor"; @@ -62,5 +71,6 @@ stdenv.mkDerivation rec { If you want to import .eps files install ps2edit. ''; + maintainers = with maintainers; [ matthewbauer ]; }; } diff --git a/pkgs/applications/graphics/jpegoptim/default.nix b/pkgs/applications/graphics/jpegoptim/default.nix index 0cad1e1aabb6..b428be1a1ba3 100644 --- a/pkgs/applications/graphics/jpegoptim/default.nix +++ b/pkgs/applications/graphics/jpegoptim/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, libjpeg }: stdenv.mkDerivation rec { - version = "1.4.5"; + version = "1.4.6"; name = "jpegoptim-${version}"; src = fetchurl { url = "http://www.kokkonen.net/tjko/src/${name}.tar.gz"; - sha256 = "1mngi8c4mhzwa7i4wqrqq6i80cqj4adbacblfvk6dy573wywyxmi"; + sha256 = "1dss7907fclfl8zsw0bl4qcw0hhz6fqgi3867w0jyfm3q9jfpcc8"; }; # There are no checks, it seems. diff --git a/pkgs/applications/graphics/k3d/default.nix b/pkgs/applications/graphics/k3d/default.nix index eb59b6ff6d65..996d495d87c1 100644 --- a/pkgs/applications/graphics/k3d/default.nix +++ b/pkgs/applications/graphics/k3d/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, fetchpatch, unzip, ftgl, glew, asciidoc -, cmake, libGLU_combined, zlib, python, expat, libxml2, libsigcxx, libuuid, freetype +, cmake, ninja, libGLU_combined, zlib, python, expat, libxml2, libsigcxx, libuuid, freetype , libpng, boost, doxygen, cairomm, pkgconfig, imagemagick, libjpeg, libtiff , gettext, intltool, perl, gtkmm2, glibmm, gtkglext, pangox_compat, libXmu }: @@ -20,24 +20,25 @@ stdenv.mkDerivation rec { }) ]; - cmakeFlags = "-DK3D_BUILD_DOCS=false -DK3D_BUILD_GUIDE=false"; + cmakeFlags = [ + "-DK3D_BUILD_DOCS=false" + "-DK3D_BUILD_GUIDE=false" + ]; preConfigure = '' export LD_LIBRARY_PATH="$LD_LIBRARY_PATH''${LD_LIBRARY_PATH:+:}$PWD/build/lib" - export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -I$(echo ${gtkglext}/include/gtkglext-*) -I$(echo ${gtkglext}/lib/gtkglext-*/include)" ''; + nativeBuildInputs = [ cmake ninja gettext intltool doxygen pkgconfig perl asciidoc ]; + buildInputs = [ - cmake libGLU_combined zlib python expat libxml2 libsigcxx libuuid freetype libpng - boost doxygen cairomm pkgconfig imagemagick libjpeg libtiff - gettext intltool perl unzip ftgl glew asciidoc - gtkmm2 glibmm gtkglext pangox_compat libXmu + libGLU_combined zlib python expat libxml2 libsigcxx libuuid freetype libpng + boost cairomm imagemagick libjpeg libtiff + ftgl glew gtkmm2 glibmm gtkglext pangox_compat libXmu ]; #doCheck = false; - enableParallelBuilding = true; - meta = { description = "A 3D editor with support for procedural editing"; homepage = http://www.k-3d.org/; diff --git a/pkgs/applications/graphics/meshlab/default.nix b/pkgs/applications/graphics/meshlab/default.nix index adb1ec29237e..eaaabe8fd395 100644 --- a/pkgs/applications/graphics/meshlab/default.nix +++ b/pkgs/applications/graphics/meshlab/default.nix @@ -61,5 +61,6 @@ in stdenv.mkDerivation { license = stdenv.lib.licenses.gpl3; maintainers = with stdenv.lib.maintainers; [viric]; platforms = with stdenv.lib.platforms; linux; + broken = true; # 2018-04-11 }; } diff --git a/pkgs/applications/graphics/paraview/default.nix b/pkgs/applications/graphics/paraview/default.nix index 42b69e249267..e5385c752804 100644 --- a/pkgs/applications/graphics/paraview/default.nix +++ b/pkgs/applications/graphics/paraview/default.nix @@ -1,5 +1,5 @@ { -stdenv, fetchFromGitHub, cmake +stdenv, fetchFromGitHub, cmake, makeWrapper ,qtbase, qttools, python, libGLU_combined ,libXt, qtx11extras, qtxmlpatterns }: @@ -18,11 +18,11 @@ stdenv.mkDerivation rec { fetchSubmodules = true; }; - cmakeFlags = [ - "-DPARAVIEW_ENABLE_PYTHON=ON" - "-DPARAVIEW_INSTALL_DEVELOPMENT_FILES=ON" - "-DPARAVIEW_ENABLE_EMBEDDED_DOCUMENTATION=OFF" - ]; + cmakeFlags = [ + "-DPARAVIEW_ENABLE_PYTHON=ON" + "-DPARAVIEW_INSTALL_DEVELOPMENT_FILES=ON" + "-DPARAVIEW_ENABLE_EMBEDDED_DOCUMENTATION=OFF" + ]; # During build, binaries are called that rely on freshly built # libraries. These reside in build/lib, and are not found by @@ -35,10 +35,12 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake + makeWrapper ]; buildInputs = [ python + python.pkgs.numpy libGLU_combined libXt qtbase @@ -47,6 +49,16 @@ stdenv.mkDerivation rec { qtxmlpatterns ]; + # Paraview links into the Python library, resolving symbolic links on the way, + # so we need to put the correct sitePackages (with numpy) back on the path + postInstall = '' + wrapProgram $out/bin/paraview \ + --set PYTHONPATH "${python.pkgs.numpy}/${python.sitePackages}" + wrapProgram $out/bin/pvbatch \ + --set PYTHONPATH "${python.pkgs.numpy}/${python.sitePackages}" + wrapProgram $out/bin/pvpython \ + --set PYTHONPATH "${python.pkgs.numpy}/${python.sitePackages}" + ''; meta = { homepage = http://www.paraview.org/; diff --git a/pkgs/applications/graphics/pqiv/default.nix b/pkgs/applications/graphics/pqiv/default.nix index 9e5958871cc0..757ce52e9c4c 100644 --- a/pkgs/applications/graphics/pqiv/default.nix +++ b/pkgs/applications/graphics/pqiv/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation (rec { name = "pqiv-${version}"; - version = "2.10.2"; + version = "2.10.3"; src = fetchFromGitHub { owner = "phillipberndt"; repo = "pqiv"; rev = version; - sha256 = "0zn7ps73lw04l9i4777c90ik07v3hkg66mnpz8vvvwjyi40i77a7"; + sha256 = "16nhnv0dcp242jf1099pjr5dwnc65i40cnb3dvx1avdhidcmsx01"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/applications/graphics/processing3/default.nix b/pkgs/applications/graphics/processing3/default.nix new file mode 100644 index 000000000000..4ef078fdbac6 --- /dev/null +++ b/pkgs/applications/graphics/processing3/default.nix @@ -0,0 +1,53 @@ +{ stdenv, callPackage, fetchFromGitHub, makeWrapper, ant, jdk, rsync, javaPackages, libXxf86vm }: + +stdenv.mkDerivation rec { + version = "3.3.7"; + name = "processing3-${version}"; + + src = fetchFromGitHub { + owner = "processing"; + repo = "processing"; + rev = "processing-0264-3.3.7"; + sha256 = "0a20z19lmc4xarfnr7xshcmlv3xkc2dgjxknis0iv79gxnwlqhpq"; + }; + + nativeBuildInputs = [ ant rsync makeWrapper ]; + buildInputs = [ jdk ]; + + buildPhase = '' + # use compiled jogl to avoid patchelf'ing .so files inside jars + rm core/library/*.jar + cp ${javaPackages.jogl_2_3_2}/share/java/*.jar core/library/ + + # suppress "Not fond of this Java VM" message box + substituteInPlace app/src/processing/app/platform/LinuxPlatform.java \ + --replace 'Messages.showWarning' 'if (false) Messages.showWarning' + + ( cd build + substituteInPlace build.xml --replace "jre-download," "" # do not download jre1.8.0_144 + mkdir -p linux/jre1.8.0_144 # fake dir to avoid error + ant build ) + ''; + + installPhase = '' + mkdir $out + cp -dpR build/linux/work $out/${name} + + rmdir $out/${name}/java + ln -s ${jdk} $out/${name}/java + + makeWrapper $out/${name}/processing $out/bin/processing \ + --prefix _JAVA_OPTIONS " " -Dawt.useSystemAAFontSettings=lcd \ + --prefix LD_LIBRARY_PATH : ${libXxf86vm}/lib + makeWrapper $out/${name}/processing-java $out/bin/processing-java \ + --prefix _JAVA_OPTIONS " " -Dawt.useSystemAAFontSettings=lcd \ + --prefix LD_LIBRARY_PATH : ${libXxf86vm}/lib + ''; + + meta = with stdenv.lib; { + description = "A language and IDE for electronic arts"; + homepage = https://processing.org; + license = licenses.gpl2Plus; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/graphics/rapcad/default.nix b/pkgs/applications/graphics/rapcad/default.nix index c8327b9bca19..b300c0071fae 100644 --- a/pkgs/applications/graphics/rapcad/default.nix +++ b/pkgs/applications/graphics/rapcad/default.nix @@ -29,5 +29,6 @@ stdenv.mkDerivation rec { maintainers = [ maintainers.raskin ]; platforms = platforms.linux; description = ''Constructive solid geometry package''; + broken = true; # 2018-04-11 }; } diff --git a/pkgs/applications/graphics/scantailor/advanced.nix b/pkgs/applications/graphics/scantailor/advanced.nix index 8f26d5a9884a..bea4fe9b2c6c 100644 --- a/pkgs/applications/graphics/scantailor/advanced.nix +++ b/pkgs/applications/graphics/scantailor/advanced.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { name = "scantailor-advanced-${version}"; - version = "1.0.12"; + version = "1.0.14"; src = fetchFromGitHub { owner = "4lex4"; repo = "scantailor-advanced"; rev = "v${version}"; - sha256 = "0i80jzky7l8wdv0wqdx48x1q0wmj72hhm0050pd43q80pj5r78a0"; + sha256 = "1h7lng0hxkjcvwbdf1yx59a382kiwn9bpll42acqs71nsvw65p28"; }; nativeBuildInputs = [ cmake qttools ]; diff --git a/pkgs/applications/graphics/shotwell/default.nix b/pkgs/applications/graphics/shotwell/default.nix index c214fa58bc9b..1ebc2f88ec5d 100644 --- a/pkgs/applications/graphics/shotwell/default.nix +++ b/pkgs/applications/graphics/shotwell/default.nix @@ -7,13 +7,13 @@ let pname = "shotwell"; - version = "0.28.1"; + version = "0.28.2"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1ywikm5kdsr7q8hklh146x28rzvqkqfjs8kdpw7zcc15ri0dkzya"; + sha256 = "0pa7lb33i4hdnz7hr7x938d48ilrnj47jzb99la79rmm08yyin8n"; }; nativeBuildInputs = [ diff --git a/pkgs/applications/graphics/shutter/default.nix b/pkgs/applications/graphics/shutter/default.nix index a8b4973203d1..2cc127a3fc6f 100644 --- a/pkgs/applications/graphics/shutter/default.nix +++ b/pkgs/applications/graphics/shutter/default.nix @@ -8,6 +8,7 @@ let ProcProcessTable URI ImageExifTool Gtk2AppIndicator LWPUserAgent JSON PerlMagick WWWMechanize HTTPDate HTMLForm HTMLParser HTMLTagset JSONXS CommonSense HTTPCookies NetOAuth PathClass GooCanvas X11Protocol Cairo + EncodeLocale TryTiny TypesSerialiser LWPMediaTypes ]; in stdenv.mkDerivation rec { diff --git a/pkgs/applications/kde/akonadi/akonadi-paths.patch b/pkgs/applications/kde/akonadi/akonadi-paths.patch index 91fd934b1ecc..4743c36c44d0 100644 --- a/pkgs/applications/kde/akonadi/akonadi-paths.patch +++ b/pkgs/applications/kde/akonadi/akonadi-paths.patch @@ -1,8 +1,40 @@ -Index: akonadi-17.04.0/src/server/storage/dbconfigmysql.cpp -=================================================================== ---- akonadi-17.04.0.orig/src/server/storage/dbconfigmysql.cpp -+++ akonadi-17.04.0/src/server/storage/dbconfigmysql.cpp -@@ -63,7 +63,6 @@ bool DbConfigMysql::init(QSettings &sett +diff --git a/src/akonadicontrol/agentmanager.cpp b/src/akonadicontrol/agentmanager.cpp +index 2e9f1acf4..ecc80afdc 100644 +--- a/src/akonadicontrol/agentmanager.cpp ++++ b/src/akonadicontrol/agentmanager.cpp +@@ -84,12 +84,12 @@ AgentManager::AgentManager(bool verbose, QObject *parent) + mStorageController = new Akonadi::ProcessControl; + mStorageController->setShutdownTimeout(15 * 1000); // the server needs more time for shutdown if we are using an internal mysqld + connect(mStorageController, &Akonadi::ProcessControl::unableToStart, this, &AgentManager::serverFailure); +- mStorageController->start(QStringLiteral("akonadiserver"), serviceArgs, Akonadi::ProcessControl::RestartOnCrash); ++ mStorageController->start(QLatin1String(NIX_OUT "/bin/akonadiserver"), serviceArgs, Akonadi::ProcessControl::RestartOnCrash); + + if (mAgentServerEnabled) { + mAgentServer = new Akonadi::ProcessControl; + connect(mAgentServer, &Akonadi::ProcessControl::unableToStart, this, &AgentManager::agentServerFailure); +- mAgentServer->start(QStringLiteral("akonadi_agent_server"), serviceArgs, Akonadi::ProcessControl::RestartOnCrash); ++ mAgentServer->start(QLatin1String(NIX_OUT "/bin/akonadi_agent_server"), serviceArgs, Akonadi::ProcessControl::RestartOnCrash); + } + + #ifndef QT_NO_DEBUG +diff --git a/src/akonadicontrol/agentprocessinstance.cpp b/src/akonadicontrol/agentprocessinstance.cpp +index be1cc4afb..6d0c1d7e5 100644 +--- a/src/akonadicontrol/agentprocessinstance.cpp ++++ b/src/akonadicontrol/agentprocessinstance.cpp +@@ -62,7 +62,7 @@ bool AgentProcessInstance::start(const AgentType &agentInfo) + } else { + Q_ASSERT(agentInfo.launchMethod == AgentType::Launcher); + const QStringList arguments = QStringList() << executable << identifier(); +- const QString agentLauncherExec = Akonadi::StandardDirs::findExecutable(QStringLiteral("akonadi_agent_launcher")); ++ const QString agentLauncherExec = QLatin1String(NIX_OUT "/bin/akonadi_agent_launcher"); + mController->start(agentLauncherExec, arguments); + } + return true; +diff --git a/src/server/storage/dbconfigmysql.cpp b/src/server/storage/dbconfigmysql.cpp +index a32e86602..48ea4e52e 100644 +--- a/src/server/storage/dbconfigmysql.cpp ++++ b/src/server/storage/dbconfigmysql.cpp +@@ -63,7 +63,6 @@ bool DbConfigMysql::init(QSettings &settings) // determine default settings depending on the driver QString defaultHostName; QString defaultOptions; @@ -10,7 +42,7 @@ Index: akonadi-17.04.0/src/server/storage/dbconfigmysql.cpp QString defaultCleanShutdownCommand; #ifndef Q_OS_WIN -@@ -71,25 +70,8 @@ bool DbConfigMysql::init(QSettings &sett +@@ -71,25 +70,7 @@ bool DbConfigMysql::init(QSettings &settings) #endif const bool defaultInternalServer = true; @@ -29,28 +61,28 @@ Index: akonadi-17.04.0/src/server/storage/dbconfigmysql.cpp - << QStringLiteral("/opt/local/lib/mysql5/bin") - << QStringLiteral("/opt/mysql/sbin"); - if (defaultServerPath.isEmpty()) { -- defaultServerPath = XdgBaseDirs::findExecutableFile(QStringLiteral("mysqld"), mysqldSearchPath); +- defaultServerPath = QStandardPaths::findExecutable(QStringLiteral("mysqld"), mysqldSearchPath); - } - -- const QString mysqladminPath = XdgBaseDirs::findExecutableFile(QStringLiteral("mysqladmin"), mysqldSearchPath); +- +- const QString mysqladminPath = QStandardPaths::findExecutable(QStringLiteral("mysqladmin"), mysqldSearchPath); + const QString mysqladminPath = QLatin1String(NIXPKGS_MYSQL_MYSQLADMIN); if (!mysqladminPath.isEmpty()) { #ifndef Q_OS_WIN defaultCleanShutdownCommand = QStringLiteral("%1 --defaults-file=%2/mysql.conf --socket=%3/mysql.socket shutdown") -@@ -99,10 +81,10 @@ bool DbConfigMysql::init(QSettings &sett +@@ -99,10 +80,10 @@ bool DbConfigMysql::init(QSettings &settings) #endif } -- mMysqlInstallDbPath = XdgBaseDirs::findExecutableFile(QStringLiteral("mysql_install_db"), mysqldSearchPath); +- mMysqlInstallDbPath = QStandardPaths::findExecutable(QStringLiteral("mysql_install_db"), mysqldSearchPath); + mMysqlInstallDbPath = QLatin1String(NIXPKGS_MYSQL_MYSQL_INSTALL_DB); qCDebug(AKONADISERVER_LOG) << "Found mysql_install_db: " << mMysqlInstallDbPath; -- mMysqlCheckPath = XdgBaseDirs::findExecutableFile(QStringLiteral("mysqlcheck"), mysqldSearchPath); +- mMysqlCheckPath = QStandardPaths::findExecutable(QStringLiteral("mysqlcheck"), mysqldSearchPath); + mMysqlCheckPath = QLatin1String(NIXPKGS_MYSQL_MYSQLCHECK); qCDebug(AKONADISERVER_LOG) << "Found mysqlcheck: " << mMysqlCheckPath; mInternalServer = settings.value(QStringLiteral("QMYSQL/StartServer"), defaultInternalServer).toBool(); -@@ -119,7 +101,7 @@ bool DbConfigMysql::init(QSettings &sett +@@ -119,7 +100,7 @@ bool DbConfigMysql::init(QSettings &settings) mUserName = settings.value(QStringLiteral("User")).toString(); mPassword = settings.value(QStringLiteral("Password")).toString(); mConnectionOptions = settings.value(QStringLiteral("Options"), defaultOptions).toString(); @@ -59,7 +91,7 @@ Index: akonadi-17.04.0/src/server/storage/dbconfigmysql.cpp mCleanServerShutdownCommand = settings.value(QStringLiteral("CleanServerShutdownCommand"), defaultCleanShutdownCommand).toString(); settings.endGroup(); -@@ -129,9 +111,6 @@ bool DbConfigMysql::init(QSettings &sett +@@ -129,9 +110,6 @@ bool DbConfigMysql::init(QSettings &settings) // intentionally not namespaced as we are the only one in this db instance when using internal mode mDatabaseName = QStringLiteral("akonadi"); } @@ -69,7 +101,7 @@ Index: akonadi-17.04.0/src/server/storage/dbconfigmysql.cpp qCDebug(AKONADISERVER_LOG) << "Using mysqld:" << mMysqldPath; -@@ -140,9 +119,6 @@ bool DbConfigMysql::init(QSettings &sett +@@ -140,9 +118,6 @@ bool DbConfigMysql::init(QSettings &settings) settings.setValue(QStringLiteral("Name"), mDatabaseName); settings.setValue(QStringLiteral("Host"), mHostName); settings.setValue(QStringLiteral("Options"), mConnectionOptions); @@ -79,20 +111,20 @@ Index: akonadi-17.04.0/src/server/storage/dbconfigmysql.cpp settings.setValue(QStringLiteral("StartServer"), mInternalServer); settings.endGroup(); settings.sync(); -@@ -196,7 +172,7 @@ bool DbConfigMysql::startInternalServer( +@@ -196,7 +171,7 @@ bool DbConfigMysql::startInternalServer() #endif // generate config file -- const QString globalConfig = XdgBaseDirs::findResourceFile("config", QStringLiteral("akonadi/mysql-global.conf")); +- const QString globalConfig = StandardDirs::locateResourceFile("config", QStringLiteral("mysql-global.conf")); + const QString globalConfig = QLatin1String(NIX_OUT "/etc/xdg/akonadi/mysql-global.conf"); - const QString localConfig = XdgBaseDirs::findResourceFile("config", QStringLiteral("akonadi/mysql-local.conf")); + const QString localConfig = StandardDirs::locateResourceFile("config", QStringLiteral("mysql-local.conf")); const QString actualConfig = StandardDirs::saveDir("data") + QLatin1String("/mysql.conf"); if (globalConfig.isEmpty()) { -Index: akonadi-17.04.0/src/server/storage/dbconfigpostgresql.cpp -=================================================================== ---- akonadi-17.04.0.orig/src/server/storage/dbconfigpostgresql.cpp -+++ akonadi-17.04.0/src/server/storage/dbconfigpostgresql.cpp -@@ -58,7 +58,6 @@ bool DbConfigPostgresql::init(QSettings +diff --git a/src/server/storage/dbconfigpostgresql.cpp b/src/server/storage/dbconfigpostgresql.cpp +index 60e6272f2..ad7cefbfe 100644 +--- a/src/server/storage/dbconfigpostgresql.cpp ++++ b/src/server/storage/dbconfigpostgresql.cpp +@@ -58,7 +58,6 @@ bool DbConfigPostgresql::init(QSettings &settings) // determine default settings depending on the driver QString defaultHostName; QString defaultOptions; @@ -100,7 +132,7 @@ Index: akonadi-17.04.0/src/server/storage/dbconfigpostgresql.cpp QString defaultInitDbPath; QString defaultPgData; -@@ -70,35 +69,7 @@ bool DbConfigPostgresql::init(QSettings +@@ -70,34 +69,7 @@ bool DbConfigPostgresql::init(QSettings &settings) mInternalServer = settings.value(QStringLiteral("QPSQL/StartServer"), defaultInternalServer).toBool(); if (mInternalServer) { @@ -130,14 +162,13 @@ Index: akonadi-17.04.0/src/server/storage/dbconfigpostgresql.cpp - } - } - postgresSearchPath.append(postgresVersionedSearchPaths); -- -- defaultServerPath = XdgBaseDirs::findExecutableFile(QStringLiteral("pg_ctl"), postgresSearchPath); -- defaultInitDbPath = XdgBaseDirs::findExecutableFile(QStringLiteral("initdb"), postgresSearchPath); +- defaultServerPath = QStandardPaths::findExecutable(QStringLiteral("pg_ctl"), postgresSearchPath); +- defaultInitDbPath = QStandardPaths::findExecutable(QStringLiteral("initdb"), postgresSearchPath); + defaultInitDbPath = QLatin1String(NIXPKGS_POSTGRES_INITDB); defaultHostName = Utils::preferredSocketDirectory(StandardDirs::saveDir("data", QStringLiteral("db_misc"))); defaultPgData = StandardDirs::saveDir("data", QStringLiteral("db_data")); } -@@ -118,10 +89,7 @@ bool DbConfigPostgresql::init(QSettings +@@ -117,10 +89,7 @@ bool DbConfigPostgresql::init(QSettings &settings) mUserName = settings.value(QStringLiteral("User")).toString(); mPassword = settings.value(QStringLiteral("Password")).toString(); mConnectionOptions = settings.value(QStringLiteral("Options"), defaultOptions).toString(); @@ -149,7 +180,7 @@ Index: akonadi-17.04.0/src/server/storage/dbconfigpostgresql.cpp qCDebug(AKONADISERVER_LOG) << "Found pg_ctl:" << mServerPath; mInitDbPath = settings.value(QStringLiteral("InitDbPath"), defaultInitDbPath).toString(); if (mInternalServer && mInitDbPath.isEmpty()) { -@@ -142,7 +110,6 @@ bool DbConfigPostgresql::init(QSettings +@@ -141,7 +110,6 @@ bool DbConfigPostgresql::init(QSettings &settings) settings.setValue(QStringLiteral("Port"), mHostPort); } settings.setValue(QStringLiteral("Options"), mConnectionOptions); @@ -157,35 +188,3 @@ Index: akonadi-17.04.0/src/server/storage/dbconfigpostgresql.cpp settings.setValue(QStringLiteral("InitDbPath"), mInitDbPath); settings.setValue(QStringLiteral("StartServer"), mInternalServer); settings.endGroup(); -Index: akonadi-17.04.0/src/akonadicontrol/agentprocessinstance.cpp -=================================================================== ---- akonadi-17.04.0.orig/src/akonadicontrol/agentprocessinstance.cpp -+++ akonadi-17.04.0/src/akonadicontrol/agentprocessinstance.cpp -@@ -62,7 +62,7 @@ bool AgentProcessInstance::start(const A - } else { - Q_ASSERT(agentInfo.launchMethod == AgentType::Launcher); - const QStringList arguments = QStringList() << executable << identifier(); -- const QString agentLauncherExec = XdgBaseDirs::findExecutableFile(QStringLiteral("akonadi_agent_launcher")); -+ const QString agentLauncherExec = QLatin1String(NIX_OUT "/bin/akonadi_agent_launcher"); - mController->start(agentLauncherExec, arguments); - } - return true; -Index: akonadi-17.04.0/src/akonadicontrol/agentmanager.cpp -=================================================================== ---- akonadi-17.04.0.orig/src/akonadicontrol/agentmanager.cpp -+++ akonadi-17.04.0/src/akonadicontrol/agentmanager.cpp -@@ -102,12 +102,12 @@ AgentManager::AgentManager(bool verbose, - mStorageController = new Akonadi::ProcessControl; - mStorageController->setShutdownTimeout(15 * 1000); // the server needs more time for shutdown if we are using an internal mysqld - connect(mStorageController, &Akonadi::ProcessControl::unableToStart, this, &AgentManager::serverFailure); -- mStorageController->start(QStringLiteral("akonadiserver"), serviceArgs, Akonadi::ProcessControl::RestartOnCrash); -+ mStorageController->start(QLatin1String(NIX_OUT "/bin/akonadiserver"), serviceArgs, Akonadi::ProcessControl::RestartOnCrash); - - if (mAgentServerEnabled) { - mAgentServer = new Akonadi::ProcessControl; - connect(mAgentServer, &Akonadi::ProcessControl::unableToStart, this, &AgentManager::agentServerFailure); -- mAgentServer->start(QStringLiteral("akonadi_agent_server"), serviceArgs, Akonadi::ProcessControl::RestartOnCrash); -+ mAgentServer->start(QLatin1String(NIX_OUT "/bin/akonadi_agent_server"), serviceArgs, Akonadi::ProcessControl::RestartOnCrash); - } - - #ifndef QT_NO_DEBUG diff --git a/pkgs/applications/kde/default.nix b/pkgs/applications/kde/default.nix index 0c080753f053..5870179b6c0b 100644 --- a/pkgs/applications/kde/default.nix +++ b/pkgs/applications/kde/default.nix @@ -28,6 +28,7 @@ still shows most of the available features is in `./gwenview.nix`. { stdenv, lib, libsForQt5, fetchurl, recurseIntoAttrs, plasma5, attica, phonon, + okteta }: let @@ -84,6 +85,7 @@ let incidenceeditor = callPackage ./incidenceeditor.nix {}; k3b = callPackage ./k3b.nix {}; kaddressbook = callPackage ./kaddressbook.nix {}; + kalarm = callPackage ./kalarm.nix {}; kalarmcal = callPackage ./kalarmcal.nix {}; kate = callPackage ./kate.nix {}; kcachegrind = callPackage ./kcachegrind.nix {}; @@ -106,7 +108,6 @@ let kget = callPackage ./kget.nix {}; kgpg = callPackage ./kgpg.nix {}; khelpcenter = callPackage ./khelpcenter.nix {}; - kholidays = callPackage ./kholidays.nix {}; kidentitymanagement = callPackage ./kidentitymanagement.nix {}; kig = callPackage ./kig.nix {}; kimap = callPackage ./kimap.nix {}; @@ -151,7 +152,6 @@ let mbox-importer = callPackage ./mbox-importer.nix {}; messagelib = callPackage ./messagelib.nix {}; minuet = callPackage ./minuet.nix {}; - okteta = callPackage ./okteta.nix {}; okular = callPackage ./okular.nix {}; pimcommon = callPackage ./pimcommon.nix {}; pim-data-exporter = callPackage ./pim-data-exporter.nix {}; @@ -159,6 +159,9 @@ let print-manager = callPackage ./print-manager.nix {}; spectacle = callPackage ./spectacle.nix {}; syndication = callPackage ./syndication.nix {}; + # Okteta was removed from kde applications and will now be released independently + # Lets keep an alias for compatibility reasons + inherit okteta; }; in lib.makeScope libsForQt5.newScope packages diff --git a/pkgs/applications/kde/fetch.sh b/pkgs/applications/kde/fetch.sh index 9ad488f63ab4..a2feeac7cd9f 100644 --- a/pkgs/applications/kde/fetch.sh +++ b/pkgs/applications/kde/fetch.sh @@ -1 +1 @@ -WGET_ARGS=( https://download.kde.org/stable/applications/17.12.3/ -A '*.tar.xz' ) +WGET_ARGS=( https://download.kde.org/stable/applications/18.04.0/ -A '*.tar.xz' ) diff --git a/pkgs/applications/kde/kalarm.nix b/pkgs/applications/kde/kalarm.nix new file mode 100644 index 000000000000..9978e7ff6674 --- /dev/null +++ b/pkgs/applications/kde/kalarm.nix @@ -0,0 +1,37 @@ +{ + mkDerivation, lib, + extra-cmake-modules, + + kauth, kcodecs, kcompletion, kconfig, kconfigwidgets, kdbusaddons, kdoctools, + kguiaddons, ki18n, kiconthemes, kjobwidgets, kcmutils, kdelibs4support, kio, + knotifications, kservice, kwidgetsaddons, kwindowsystem, kxmlgui, phonon, + + kimap, akonadi, akonadi-contacts, akonadi-mime, kalarmcal, kcalcore, kcalutils, + kholidays, kidentitymanagement, libkdepim, mailcommon, kmailtransport, kmime, + pimcommon, kpimtextedit, kdepim-apps-libs, messagelib, + + qtx11extras, + + kdepim-runtime +}: + +mkDerivation { + name = "kalarm"; + meta = { + license = with lib.licenses; [ gpl2 ]; + maintainers = [ lib.maintainers.rittelle ]; + }; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; + buildInputs = [ + kauth kcodecs kcompletion kconfig kconfigwidgets kdbusaddons kdoctools + kguiaddons ki18n kiconthemes kjobwidgets kcmutils kdelibs4support kio + knotifications kservice kwidgetsaddons kwindowsystem kxmlgui phonon + + kimap akonadi akonadi-contacts akonadi-mime kalarmcal kcalcore kcalutils + kholidays kidentitymanagement libkdepim mailcommon kmailtransport kmime + pimcommon kpimtextedit kdepim-apps-libs messagelib + + qtx11extras + ]; + propagatedUserEnvPkgs = [ kdepim-runtime ]; +} diff --git a/pkgs/applications/kde/kalarmcal.nix b/pkgs/applications/kde/kalarmcal.nix index f2fb6f4d8bbd..46832477cc60 100644 --- a/pkgs/applications/kde/kalarmcal.nix +++ b/pkgs/applications/kde/kalarmcal.nix @@ -2,7 +2,7 @@ mkDerivation, lib, kdepimTeam, extra-cmake-modules, kdoctools, akonadi, kcalcore, kdelibs4support, kholidays, kidentitymanagement, - kpimtextedit, + kpimtextedit, kcalutils }: mkDerivation { @@ -13,7 +13,7 @@ mkDerivation { }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; propagatedBuildInputs = [ - akonadi kcalcore kdelibs4support kholidays kidentitymanagement kpimtextedit + akonadi kcalcore kdelibs4support kholidays kidentitymanagement kpimtextedit kcalutils ]; outputs = [ "out" "dev" ]; } diff --git a/pkgs/applications/kde/konsole.nix b/pkgs/applications/kde/konsole.nix index 5269941fa113..2847e312d00a 100644 --- a/pkgs/applications/kde/konsole.nix +++ b/pkgs/applications/kde/konsole.nix @@ -4,7 +4,7 @@ kbookmarks, kcompletion, kconfig, kconfigwidgets, kcoreaddons, kguiaddons, ki18n, kiconthemes, kinit, kdelibs4support, kio, knotifications, knotifyconfig, kparts, kpty, kservice, ktextwidgets, kwidgetsaddons, - kwindowsystem, kxmlgui, qtscript + kwindowsystem, kxmlgui, qtscript, knewstuff }: mkDerivation { @@ -17,7 +17,7 @@ mkDerivation { buildInputs = [ kbookmarks kcompletion kconfig kconfigwidgets kcoreaddons kdelibs4support kguiaddons ki18n kiconthemes kinit kio knotifications knotifyconfig kparts kpty - kservice ktextwidgets kwidgetsaddons kwindowsystem kxmlgui qtscript + kservice ktextwidgets kwidgetsaddons kwindowsystem kxmlgui qtscript knewstuff ]; propagatedUserEnvPkgs = [ (lib.getBin kinit) ]; } diff --git a/pkgs/applications/kde/mbox-importer.nix b/pkgs/applications/kde/mbox-importer.nix index aa637d440bd9..0704003353ae 100644 --- a/pkgs/applications/kde/mbox-importer.nix +++ b/pkgs/applications/kde/mbox-importer.nix @@ -14,7 +14,4 @@ mkDerivation { buildInputs = [ akonadi akonadi-search kconfig kservice kio mailcommon mailimporter messagelib ]; - preHook = '' - set -x - ''; } diff --git a/pkgs/applications/kde/okular.nix b/pkgs/applications/kde/okular.nix index 5f6f28c95b08..39fb232b3421 100644 --- a/pkgs/applications/kde/okular.nix +++ b/pkgs/applications/kde/okular.nix @@ -5,7 +5,7 @@ kcompletion, kconfig, kconfigwidgets, kcoreaddons, kdbusaddons, kdegraphics-mobipocket, kiconthemes, kjs, khtml, kio, kparts, kpty, kwallet, kwindowsystem, libkexiv2, libspectre, libzip, phonon, poppler, qca-qt5, - qtdeclarative, qtsvg, threadweaver + qtdeclarative, qtsvg, threadweaver, kcrash }: mkDerivation { @@ -16,7 +16,7 @@ mkDerivation { kcompletion kconfig kconfigwidgets kcoreaddons kdbusaddons kdegraphics-mobipocket kiconthemes kjs khtml kio kparts kpty kwallet kwindowsystem libkexiv2 libspectre libzip phonon poppler qca-qt5 - qtdeclarative qtsvg threadweaver + qtdeclarative qtsvg threadweaver kcrash ] ++ lib.optional (!stdenv.isAarch64) chmlib; meta = with lib; { homepage = http://www.kde.org; diff --git a/pkgs/applications/kde/spectacle.nix b/pkgs/applications/kde/spectacle.nix index 6deec6aaabb4..f036e8cf632c 100644 --- a/pkgs/applications/kde/spectacle.nix +++ b/pkgs/applications/kde/spectacle.nix @@ -4,7 +4,7 @@ ki18n, xcb-util-cursor, kconfig, kcoreaddons, kdbusaddons, kdeclarative, kio, kipi-plugins, knotifications, kscreen, kwidgetsaddons, kwindowsystem, kxmlgui, libkipi, - qtx11extras + qtx11extras, knewstuff }: mkDerivation { @@ -14,6 +14,7 @@ mkDerivation { buildInputs = [ kconfig kcoreaddons kdbusaddons kdeclarative ki18n kio knotifications kscreen kwidgetsaddons kwindowsystem kxmlgui libkipi qtx11extras xcb-util-cursor + knewstuff ]; propagatedUserEnvPkgs = [ kipi-plugins libkipi ]; } diff --git a/pkgs/applications/kde/srcs.nix b/pkgs/applications/kde/srcs.nix index d61784805e45..36c18a3f9979 100644 --- a/pkgs/applications/kde/srcs.nix +++ b/pkgs/applications/kde/srcs.nix @@ -3,1691 +3,1699 @@ { akonadi = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/akonadi-17.12.3.tar.xz"; - sha256 = "006cb98k3kxd51d0d07984aj4d0km0bn0v3rigpa3sw5s07w8dfi"; - name = "akonadi-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/akonadi-18.04.0.tar.xz"; + sha256 = "1scbc6k2w23qmw4qa147ji7r6p88b97yi9wr46xlshgcn2kj684d"; + name = "akonadi-18.04.0.tar.xz"; }; }; akonadi-calendar = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/akonadi-calendar-17.12.3.tar.xz"; - sha256 = "0ffrnpwyjmvx80qziajdkihdzl5pyp0zbm8qg8wkcr8nxs3fgv6a"; - name = "akonadi-calendar-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/akonadi-calendar-18.04.0.tar.xz"; + sha256 = "09fk8n69f83ygwfsdjx4mv9hwqpifpv9nbdnl19pjgw2ffp99rna"; + name = "akonadi-calendar-18.04.0.tar.xz"; }; }; akonadi-calendar-tools = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/akonadi-calendar-tools-17.12.3.tar.xz"; - sha256 = "0836al499pd0bmwgaqzmbbmas3jmn44hv37y9k6j6ab71gpkjjy9"; - name = "akonadi-calendar-tools-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/akonadi-calendar-tools-18.04.0.tar.xz"; + sha256 = "1b10kybjj803qwsz74dhism6q7q0lmslqvsb8b9ma8wqk9ajs33f"; + name = "akonadi-calendar-tools-18.04.0.tar.xz"; }; }; akonadiconsole = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/akonadiconsole-17.12.3.tar.xz"; - sha256 = "0xny4y5i03sj93dxaafnqiyczichjnzjrx1h4z13fn62flz8fn1b"; - name = "akonadiconsole-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/akonadiconsole-18.04.0.tar.xz"; + sha256 = "053w5ywm8wlv7ssbvyq0z36jsir9mk0ywlqb0ybnlbvr5dawxnnz"; + name = "akonadiconsole-18.04.0.tar.xz"; }; }; akonadi-contacts = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/akonadi-contacts-17.12.3.tar.xz"; - sha256 = "0jbxyzvpp2lan8pi212adwflqx38paqvr661ia4zmdjnkhdvi95v"; - name = "akonadi-contacts-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/akonadi-contacts-18.04.0.tar.xz"; + sha256 = "01cfxia8vnwizzavk1vbrxbszsyg1sa3qbz79fab7iw8380zqdm2"; + name = "akonadi-contacts-18.04.0.tar.xz"; }; }; akonadi-import-wizard = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/akonadi-import-wizard-17.12.3.tar.xz"; - sha256 = "0knddbgirj55l24njak7s8ixg1v9i6g5nx6ijh6cnnbr2zl6aws4"; - name = "akonadi-import-wizard-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/akonadi-import-wizard-18.04.0.tar.xz"; + sha256 = "123gaxs5zi5b8x1ripr8ldjipx6rpmr3f51mgv40ibx1h967in19"; + name = "akonadi-import-wizard-18.04.0.tar.xz"; }; }; akonadi-mime = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/akonadi-mime-17.12.3.tar.xz"; - sha256 = "0n04x37palp2k6mq20p97k89qi2zfncaapn5pcf4372bzvzi9vj2"; - name = "akonadi-mime-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/akonadi-mime-18.04.0.tar.xz"; + sha256 = "14xgi5saylbp19gg0lnqpasz5x335wz6dnmpfsicz0j5452yfznw"; + name = "akonadi-mime-18.04.0.tar.xz"; }; }; akonadi-notes = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/akonadi-notes-17.12.3.tar.xz"; - sha256 = "0lwnyl12a5sc3ijmahqy3prdzh9352rsqp2jpw2y58xpa2sx0w3g"; - name = "akonadi-notes-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/akonadi-notes-18.04.0.tar.xz"; + sha256 = "0ahr185jjyh68qf57vaja6c867rm0iy8jp78g4nmzf3dc6y7r01v"; + name = "akonadi-notes-18.04.0.tar.xz"; }; }; akonadi-search = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/akonadi-search-17.12.3.tar.xz"; - sha256 = "0npnbnras7lxs4r1g0v2nynpdni7wni7y9hy30k61lbif06ghm9x"; - name = "akonadi-search-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/akonadi-search-18.04.0.tar.xz"; + sha256 = "1jn23rr9yah2c4cccbkcvxn4rr6p0q4327b0kwjqzag4lkwd2fy0"; + name = "akonadi-search-18.04.0.tar.xz"; }; }; akregator = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/akregator-17.12.3.tar.xz"; - sha256 = "0032jg05xwk29hpqscb5xfk7ipcpprhw8m28ksfx7v77fb025dsp"; - name = "akregator-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/akregator-18.04.0.tar.xz"; + sha256 = "10hid155gszwh7gxp4pqbcfch6hrf0bsikj8ah2fvdgii96dn9gc"; + name = "akregator-18.04.0.tar.xz"; }; }; analitza = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/analitza-17.12.3.tar.xz"; - sha256 = "0xyr5s69768l0lp1qkp68jvny8mfh36q1xpz8msdhcn4513bw5sw"; - name = "analitza-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/analitza-18.04.0.tar.xz"; + sha256 = "1yx18mbxvkswpn120rhi092l5wz6s60194q076wdgimx71ngn2v2"; + name = "analitza-18.04.0.tar.xz"; }; }; ark = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/ark-17.12.3.tar.xz"; - sha256 = "0hjnzcn6ijpgqld7034gwzyl9m0i5nwac457f010ibzf0qp10gdi"; - name = "ark-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/ark-18.04.0.tar.xz"; + sha256 = "19bh71j5dvz80mz9xff4ygd0qdvjwsihyx5cb5ay6a2gdf1fhm12"; + name = "ark-18.04.0.tar.xz"; }; }; artikulate = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/artikulate-17.12.3.tar.xz"; - sha256 = "0ynbq0m7rk4mm3khjsh0bl744g7m6l2cq9v2a4slg7n4dq8gr8zx"; - name = "artikulate-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/artikulate-18.04.0.tar.xz"; + sha256 = "1fqv71przn3yfv4dk511bh5bd0cdmwkixwcg17r037nmj3z0xdhg"; + name = "artikulate-18.04.0.tar.xz"; }; }; audiocd-kio = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/audiocd-kio-17.12.3.tar.xz"; 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+ name = "picmi-18.04.0.tar.xz"; }; }; pimcommon = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/pimcommon-17.12.3.tar.xz"; - sha256 = "1yav8flw6rf5qdwgys3zkmijp81p56hwn6cd71ckfzdrjm11kikq"; - name = "pimcommon-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/pimcommon-18.04.0.tar.xz"; + sha256 = "0xnh0xys4sfqashimc1zsdxbssd3821bp9cx6hb0d8l3bq5x2vrp"; + name = "pimcommon-18.04.0.tar.xz"; }; }; pim-data-exporter = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/pim-data-exporter-17.12.3.tar.xz"; - sha256 = "0j5ynb0y602lnl571i247dbxna7xjqfphl7bcfqmg09ipjhxvk5b"; - name = "pim-data-exporter-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/pim-data-exporter-18.04.0.tar.xz"; + sha256 = "0isr1hv74n9mbihirk4qr109d4shh42k8jgcy9v2hmkplq72vwc7"; + name = "pim-data-exporter-18.04.0.tar.xz"; }; }; pim-sieve-editor = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/pim-sieve-editor-17.12.3.tar.xz"; - sha256 = "0bkd5qsrabwg5imnif8z0hvhsk00a2n23238f9y14g963bhyw4pp"; - name = "pim-sieve-editor-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/pim-sieve-editor-18.04.0.tar.xz"; + sha256 = "0q1f72mb925qzikqfpv74dcc5f9ipxszvm0z05lsp1dhrmz1pf9a"; + name = "pim-sieve-editor-18.04.0.tar.xz"; }; }; poxml = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/poxml-17.12.3.tar.xz"; - sha256 = "0r8wm2x13ayb3mi69c35plvwzw7r9525idk3indsxc0rhv5qkhfp"; - name = "poxml-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/poxml-18.04.0.tar.xz"; + sha256 = "1rwr1ldrkwyfxm56i16mpq0vmqiq2397gcbzg4skqpc727s55nlv"; + name = "poxml-18.04.0.tar.xz"; }; }; print-manager = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/print-manager-17.12.3.tar.xz"; - sha256 = "0w1snq5ca7hza3x4gp17skia6g8yvarn9g3qacfwp13vad4v8zj7"; - name = "print-manager-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/print-manager-18.04.0.tar.xz"; + sha256 = "1x70xia2rph40flx4r3cpxcvxfzny83v87l4kgc1n0khavhp9lpx"; + name = "print-manager-18.04.0.tar.xz"; }; }; rocs = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/rocs-17.12.3.tar.xz"; - sha256 = "1dfg0klvix2mgnvw3dkh13694iac5jf0jk8rm9ssxcaljvix7h46"; - name = "rocs-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/rocs-18.04.0.tar.xz"; + sha256 = "0q0q9bnmsw23jdbrxrkmmjvyr5jv4s1z8v9h7nsaxqs1k2prflp4"; + name = "rocs-18.04.0.tar.xz"; }; }; signon-kwallet-extension = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/signon-kwallet-extension-17.12.3.tar.xz"; - sha256 = "0r9whz7p6v9wgbycdxzgxfm1ngxhjk4dzir5k5fqvmb6wrg05v4m"; - name = "signon-kwallet-extension-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/signon-kwallet-extension-18.04.0.tar.xz"; + sha256 = "04r92pc8l2vw1dc916n658484v14smqrgg4ngx6rccffm58jfvk0"; + name = "signon-kwallet-extension-18.04.0.tar.xz"; }; }; spectacle = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/spectacle-17.12.3.tar.xz"; - sha256 = "12g976ys2ga88n0a45zqkai28bmxw0vxy2qlgdmx7mxvkpwlccyr"; - name = "spectacle-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/spectacle-18.04.0.tar.xz"; + sha256 = "1slqgp1rgzcw4nikh6zmxpp3yc04dfbjcqqx2j4wpa1p2xwfv0c2"; + name = "spectacle-18.04.0.tar.xz"; }; }; step = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/step-17.12.3.tar.xz"; - sha256 = "161r0abz18s32xpn8x2j5diwb6p4hggvlnv7p9yk1z3qm3fyj46v"; - name = "step-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/step-18.04.0.tar.xz"; + sha256 = "048f4n24819vj41a0hdabmqvw6k7wkwwicz0q0slvfqws5c3h1l4"; + name = "step-18.04.0.tar.xz"; }; }; svgpart = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/svgpart-17.12.3.tar.xz"; - sha256 = "1rcfdkpinqdbz7js7p9h0lxmnvln4y95af1icq2871w7mg4fzsf5"; - name = "svgpart-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/svgpart-18.04.0.tar.xz"; + sha256 = "1yf535ry8xc7lqhcavn2kjmjs0ngkwinm369q0qp7hfddcpsyfbp"; + name = "svgpart-18.04.0.tar.xz"; }; }; sweeper = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/sweeper-17.12.3.tar.xz"; - sha256 = "1pwjv4knj0by0sn8j788cxg3sl3vm0gql49yv47bansrvs458n4x"; - name = "sweeper-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/sweeper-18.04.0.tar.xz"; + sha256 = "1yf1xfbv516ia3aqj3l8qcdsbjac9pnm8qb23l26g6n3jnq4b331"; + name = "sweeper-18.04.0.tar.xz"; }; }; syndication = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/syndication-17.12.3.tar.xz"; - sha256 = "1bq220ir09sszj31xi8sk116k9xkhkmnmahigc73qc3hvgq0x808"; - name = "syndication-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/syndication-18.04.0.tar.xz"; + sha256 = "11fx8f9sfc51w5dg6mylbvk0yaaxvc9y2dsg9xxasiw8v6rjjq3n"; + name = "syndication-18.04.0.tar.xz"; }; }; umbrello = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/umbrello-17.12.3.tar.xz"; - sha256 = "0j3qwisq9aqvgpqx54jd4idspbgvl72xffb8qn3wwyky9jpnmhr0"; - name = "umbrello-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/umbrello-18.04.0.tar.xz"; + sha256 = "1lbf82j04j8qax7qnsqwsjrz1m4yq0ca6xc9fdhmvkpnzn5z9ydp"; + name = "umbrello-18.04.0.tar.xz"; }; }; zeroconf-ioslave = { - version = "17.12.3"; + version = "18.04.0"; src = fetchurl { - url = "${mirror}/stable/applications/17.12.3/src/zeroconf-ioslave-17.12.3.tar.xz"; - sha256 = "1glhci1vivkx3nvk6zwf2z09dii81vr5lcp3xf0aafl4p1vlxi3i"; - name = "zeroconf-ioslave-17.12.3.tar.xz"; + url = "${mirror}/stable/applications/18.04.0/src/zeroconf-ioslave-18.04.0.tar.xz"; + sha256 = "0lqh70bmlrj22d82vhm5a9ylm2yj9rz4zgncfwrh9952q1xkzl22"; + name = "zeroconf-ioslave-18.04.0.tar.xz"; }; }; } diff --git a/pkgs/applications/misc/alacritty/default.nix b/pkgs/applications/misc/alacritty/default.nix index 6907ce877645..4a10d68ee4dc 100644 --- a/pkgs/applications/misc/alacritty/default.nix +++ b/pkgs/applications/misc/alacritty/default.nix @@ -13,6 +13,7 @@ libXxf86vm, libXi, libXrandr, + libGL, xclip }: with rustPlatform; @@ -26,22 +27,23 @@ let libXcursor libXxf86vm libXrandr + libGL libXi ]; in buildRustPackage rec { name = "alacritty-unstable-${version}"; - version = "2018-03-04"; + version = "2018-04-16"; # At the moment we cannot handle git dependencies in buildRustPackage. # This fork only replaces rust-fontconfig/libfontconfig with a git submodules. src = fetchgit { url = https://github.com/Mic92/alacritty.git; rev = "rev-${version}"; - sha256 = "0pxnc6r75c7rwnsqc0idi4a60arpgchl1i8yppibhv0px5w11mwa"; + sha256 = "14qsfaij631pk0gxrhmp594f72v0z7kzymf4hnqv4k5w9xlxciwx"; fetchSubmodules = true; }; - cargoSha256 = "0q2yy9cldng8znkmhysgrwi43z2x7a8nb1bnxpy9z170q8ds0m0j"; + cargoSha256 = "0gg28fbx0kisv7hqxgzqhv4z4ikk074djfjlj90nmmi4nddp017p"; nativeBuildInputs = [ cmake diff --git a/pkgs/applications/misc/calibre/default.nix b/pkgs/applications/misc/calibre/default.nix index 50395c9c1d00..479aa26a19ea 100644 --- a/pkgs/applications/misc/calibre/default.nix +++ b/pkgs/applications/misc/calibre/default.nix @@ -5,12 +5,12 @@ }: stdenv.mkDerivation rec { - version = "3.21.0"; + version = "3.22.1"; name = "calibre-${version}"; src = fetchurl { url = "https://download.calibre-ebook.com/${version}/${name}.tar.xz"; - sha256 = "0nd9lv7armmkjwxjhs5mhsksvig5n435kww1dy9fq5hxg7nkq5ip"; + sha256 = "1nd8pbcfpfw9b26511mhvsvjyfmgnfpdmzwhi7wpkx36wpa4sask"; }; patches = [ diff --git a/pkgs/applications/misc/cbatticon/default.nix b/pkgs/applications/misc/cbatticon/default.nix index 0c71b3ffb0ad..01511b41b08d 100644 --- a/pkgs/applications/misc/cbatticon/default.nix +++ b/pkgs/applications/misc/cbatticon/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "cbatticon-${version}"; - version = "1.6.7"; + version = "1.6.8"; src = fetchFromGitHub { owner = "valr"; repo = "cbatticon"; rev = version; - sha256 = "0rm1rpq81cxjwd4f11c3ivg5hwsd08qm47vdn16yr1cmm2cw4r2d"; + sha256 = "16g26vin1693dbdr9qsnw36fdchx394lp79gvp7gcbw0w1ny9av6"; }; makeFlags = "PREFIX=$(out)"; diff --git a/pkgs/applications/misc/chirp/default.nix b/pkgs/applications/misc/chirp/default.nix index 068d8e794547..22d659dd10e4 100644 --- a/pkgs/applications/misc/chirp/default.nix +++ b/pkgs/applications/misc/chirp/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "chirp-daily-${version}"; - version = "20180325"; + version = "20180412"; src = fetchurl { url = "http://trac.chirp.danplanet.com/chirp_daily/daily-${version}/${name}.tar.gz"; - sha256 = "0z2m74hhkxvxchxv819wy947v3wl13kxrdq4kjjazzrlyaky921y"; + sha256 = "17wpxqzifz6grw9xzg9q9vr58vm2xd50fhd64c3ngdhxcnq2dpj9"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/applications/misc/cli-visualizer/default.nix b/pkgs/applications/misc/cli-visualizer/default.nix index fa9d3e2fdf48..7aecc8f823ee 100644 --- a/pkgs/applications/misc/cli-visualizer/default.nix +++ b/pkgs/applications/misc/cli-visualizer/default.nix @@ -1,14 +1,14 @@ { stdenv, fetchFromGitHub, fftw, ncurses5, libpulseaudio, makeWrapper }: stdenv.mkDerivation rec { - version = "1.6"; + version = "1.7"; name = "cli-visualizer-${version}"; src = fetchFromGitHub { owner = "dpayne"; repo = "cli-visualizer"; rev = version; - sha256 = "0mirp8bk398di5xyq95iprmdyvplfghxqmrfj7jdnpy554vx7ppc"; + sha256 = "06z6vj87xjmacppcxvgm47wby6mv1hnbqav8lpdk9v5s1hmmp1cr"; }; postPatch = '' diff --git a/pkgs/applications/misc/coursera-dl/default.nix b/pkgs/applications/misc/coursera-dl/default.nix new file mode 100644 index 000000000000..a7a2dac26c6e --- /dev/null +++ b/pkgs/applications/misc/coursera-dl/default.nix @@ -0,0 +1,41 @@ +{ stdenv, fetchFromGitHub, glibcLocales, pandoc, python3 }: + +let + pythonPackages = python3.pkgs; + +in pythonPackages.buildPythonApplication rec { + name = "coursera-dl-${version}"; + version = "0.10.0"; + + src = fetchFromGitHub { + owner = "coursera-dl"; + repo = "coursera-dl"; + rev = version; + sha256 = "0m3f6ly8c3mkb8yy2y398afswqgy17rz159s1054wzxpb4f85zlb"; + }; + + nativeBuildInputs = with pythonPackages; [ pandoc ]; + + buildInputs = with pythonPackages; [ glibcLocales ]; + + propagatedBuildInputs = with pythonPackages; [ beautifulsoup4 ConfigArgParse keyring pyasn1 requests six urllib3 ]; + + checkInputs = with pythonPackages; [ pytest mock ]; + + preConfigure = '' + export LC_ALL=en_US.utf-8 + ''; + + checkPhase = '' + # requires dbus service + py.test -k 'not test_get_credentials_with_keyring' . + ''; + + meta = with stdenv.lib; { + description = "CLI for downloading Coursera.org videos and naming them"; + homepage = https://github.com/coursera-dl/coursera-dl; + license = licenses.lgpl3Plus; + maintainers = with maintainers; [ alexfmpe ]; + platforms = platforms.darwin ++ platforms.linux; + }; +} diff --git a/pkgs/applications/misc/cpp-ethereum/default.nix b/pkgs/applications/misc/cpp-ethereum/default.nix index 857254c3cb03..33b16e3242c6 100644 --- a/pkgs/applications/misc/cpp-ethereum/default.nix +++ b/pkgs/applications/misc/cpp-ethereum/default.nix @@ -80,5 +80,6 @@ stdenv.mkDerivation rec { license = licenses.gpl3; maintainers = with maintainers; [ artuuge ]; platforms = platforms.linux; + broken = true; # 2018-04-10 }; } diff --git a/pkgs/applications/misc/dbeaver/default.nix b/pkgs/applications/misc/dbeaver/default.nix index 27ff0360a8dc..002d8fc8f23b 100644 --- a/pkgs/applications/misc/dbeaver/default.nix +++ b/pkgs/applications/misc/dbeaver/default.nix @@ -7,7 +7,7 @@ stdenv.mkDerivation rec { name = "dbeaver-ce-${version}"; - version = "5.0.2"; + version = "5.0.3"; desktopItem = makeDesktopItem { name = "dbeaver"; @@ -30,7 +30,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://dbeaver.jkiss.org/files/${version}/dbeaver-ce-${version}-linux.gtk.x86_64.tar.gz"; - sha256 = "0jk8z0s14rc1fnmi7pynhybslwm147mqih187zsa33xqmmhlw1lp"; + sha256 = "0pk40jzmd23cv690a8wslxbb4xp4msq2zwh7xm0hvs64ykm9a581"; }; installPhase = '' diff --git a/pkgs/applications/misc/electrum-dash/default.nix b/pkgs/applications/misc/electrum/dash.nix index c98efa547b39..c98efa547b39 100644 --- a/pkgs/applications/misc/electrum-dash/default.nix +++ b/pkgs/applications/misc/electrum/dash.nix diff --git a/pkgs/applications/misc/electrum/default.nix b/pkgs/applications/misc/electrum/default.nix index 425203be01cc..383f73b62994 100644 --- a/pkgs/applications/misc/electrum/default.nix +++ b/pkgs/applications/misc/electrum/default.nix @@ -2,11 +2,11 @@ python3Packages.buildPythonApplication rec { name = "electrum-${version}"; - version = "3.1.1"; + version = "3.1.3"; src = fetchurl { url = "https://download.electrum.org/${version}/Electrum-${version}.tar.gz"; - sha256 = "0ds3p7cjbavsbizm04rhzl8s59czynynpx1jvg367mwbi6gng59i"; + sha256 = "05m28yd3zr9awjhaqikf4rg08j5i4ygm750ip1z27wl446sysniy"; }; propagatedBuildInputs = with python3Packages; [ diff --git a/pkgs/applications/misc/electrum-ltc/default.nix b/pkgs/applications/misc/electrum/ltc.nix index 7852e6eb790e..7852e6eb790e 100644 --- a/pkgs/applications/misc/electrum-ltc/default.nix +++ b/pkgs/applications/misc/electrum/ltc.nix diff --git a/pkgs/applications/misc/et/default.nix b/pkgs/applications/misc/et/default.nix index 40631b0a0dbf..4aaaa3339982 100644 --- a/pkgs/applications/misc/et/default.nix +++ b/pkgs/applications/misc/et/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "et-${version}"; - version = "0.1"; + version = "0.1.1"; src = fetchFromGitHub { owner = "geistesk"; repo = "et"; rev = "${version}"; - sha256 = "1d2hq6p1y2ynk0a3l35lwbm1fcl9kg7rpjcin8bx4xcdpbw42y94"; + sha256 = "167w9qwfpd63rgy0xmkkkh5krmd91q42c3ijy3j099krgdfbb9bc"; }; buildInputs = [ libnotify gdk_pixbuf ]; diff --git a/pkgs/applications/misc/gmtp/default.nix b/pkgs/applications/misc/gmtp/default.nix index 423eea914b95..bb1556c7c4dc 100644 --- a/pkgs/applications/misc/gmtp/default.nix +++ b/pkgs/applications/misc/gmtp/default.nix @@ -17,6 +17,10 @@ stdenv.mkDerivation { enableParallelBuilding = true; + preFixup = '' + gappsWrapperArgs+=(--add-flags "--datapath \"$out/share\""); + ''; + meta = { description = "A simple MP3 and Media player client for UNIX and UNIX like systems."; homepage = https://gmtp.sourceforge.io; diff --git a/pkgs/applications/misc/gnuradio-ais/default.nix b/pkgs/applications/misc/gnuradio/ais.nix index dfb8415219c7..dfb8415219c7 100644 --- a/pkgs/applications/misc/gnuradio-ais/default.nix +++ b/pkgs/applications/misc/gnuradio/ais.nix diff --git a/pkgs/applications/misc/gnuradio-gsm/default.nix b/pkgs/applications/misc/gnuradio/gsm.nix index 6e0856ce66aa..6e0856ce66aa 100644 --- a/pkgs/applications/misc/gnuradio-gsm/default.nix +++ b/pkgs/applications/misc/gnuradio/gsm.nix diff --git a/pkgs/applications/misc/gnuradio-nacl/default.nix b/pkgs/applications/misc/gnuradio/nacl.nix index 28836958e98c..28836958e98c 100644 --- a/pkgs/applications/misc/gnuradio-nacl/default.nix +++ b/pkgs/applications/misc/gnuradio/nacl.nix diff --git a/pkgs/applications/misc/gnuradio-osmosdr/default.nix b/pkgs/applications/misc/gnuradio/osmosdr.nix index 355ca0e95449..355ca0e95449 100644 --- a/pkgs/applications/misc/gnuradio-osmosdr/default.nix +++ b/pkgs/applications/misc/gnuradio/osmosdr.nix diff --git a/pkgs/applications/misc/gnuradio-rds/default.nix b/pkgs/applications/misc/gnuradio/rds.nix index 44ed89d9002d..44ed89d9002d 100644 --- a/pkgs/applications/misc/gnuradio-rds/default.nix +++ b/pkgs/applications/misc/gnuradio/rds.nix diff --git a/pkgs/applications/misc/go-jira/default.nix b/pkgs/applications/misc/go-jira/default.nix new file mode 100644 index 000000000000..b80ddb8f303f --- /dev/null +++ b/pkgs/applications/misc/go-jira/default.nix @@ -0,0 +1,22 @@ +# This file was generated by https://github.com/kamilchm/go2nix v1.2.1 +{ stdenv, buildGoPackage, fetchgit }: + +buildGoPackage rec { + name = "go-jira-${version}"; + version = "1.0.17"; + + goPackagePath = "gopkg.in/Netflix-Skunkworks/go-jira.v1"; + + src = fetchgit { + rev = "v${version}"; + url = "https://gopkg.in/Netflix-Skunkworks/go-jira.v1"; + sha256 = "0ap5dzikp934mawigmv7ighajr5yxpck2gpnb2cmkc1p6qa6gn4v"; + }; + + meta = with stdenv.lib; { + description = "Simple command line client for Atlassian's Jira service written in Go"; + homepage = "https://github.com/Netflix-Skunkworks/go-jira"; + license = licenses.asl20; + maintainers = [ maintainers.carlosdagos ]; + }; +} diff --git a/pkgs/applications/misc/gphoto2/default.nix b/pkgs/applications/misc/gphoto2/default.nix index 77e7b592f647..5131e0739e73 100644 --- a/pkgs/applications/misc/gphoto2/default.nix +++ b/pkgs/applications/misc/gphoto2/default.nix @@ -3,11 +3,11 @@ }: stdenv.mkDerivation rec { - name = "gphoto2-2.5.15"; + name = "gphoto2-2.5.17"; src = fetchurl { url = "mirror://sourceforge/gphoto/${name}.tar.bz2"; - sha256 = "0xsa12k5fz49v8y4h3zahzr427a3ylxaf0k7hybrkp43g4i1lmxf"; + sha256 = "0kslwclyyzvnxjw3gdzhlagj7l5f8lba833ipr9s0s0c4hwi0mxa"; }; nativeBuildInputs = [ pkgconfig gettext libtool ]; diff --git a/pkgs/applications/misc/gqrx/default.nix b/pkgs/applications/misc/gqrx/default.nix index 0092dac754a3..5c449451e704 100644 --- a/pkgs/applications/misc/gqrx/default.nix +++ b/pkgs/applications/misc/gqrx/default.nix @@ -8,13 +8,13 @@ assert pulseaudioSupport -> libpulseaudio != null; stdenv.mkDerivation rec { name = "gqrx-${version}"; - version = "2.11.2"; + version = "2.11.4"; src = fetchFromGitHub { owner = "csete"; repo = "gqrx"; rev = "v${version}"; - sha256 = "0sndhzz2gnhsz41cp0zrsw3z10rqm1j3mvkzs1g1lsndrk12bcgy"; + sha256 = "0a5w9b3fi4f95j34cqsbzxks0d9hmrz4cznc8pi9b0pwvx13hqhm"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/applications/misc/guake/default.nix b/pkgs/applications/misc/guake/default.nix index 778f273f8122..17837c6c254e 100644 --- a/pkgs/applications/misc/guake/default.nix +++ b/pkgs/applications/misc/guake/default.nix @@ -1,8 +1,8 @@ -{ stdenv, fetchFromGitHub, fetchpatch, python3, gettext, gobjectIntrospection, wrapGAppsHook, glibcLocales +{ stdenv, fetchFromGitHub, python3, gettext, gobjectIntrospection, wrapGAppsHook, glibcLocales , gtk3, keybinder3, libnotify, libutempter, vte }: let - version = "3.1.0"; + version = "3.2.0"; in python3.pkgs.buildPythonApplication rec { name = "guake-${version}"; format = "other"; @@ -11,17 +11,9 @@ in python3.pkgs.buildPythonApplication rec { owner = "Guake"; repo = "guake"; rev = version; - sha256 = "0wyis7vxfhwrpq5r72c58k7hqzbk0f5ilm1zffcmbryvy11abgmx"; + sha256 = "1qghapg9sslj9fdrl2mnbi10lgqgqa36gdag74wn7as9wak4qc3d"; }; - patches = [ - # https://github.com/Guake/guake/issues/1264 - (fetchpatch { - url = https://github.com/Guake/guake/commit/f289aa381bc5fffe83b1ba385c606a2e5cdc94a8.patch; - sha256 = "038niw44q14fs34nha1lz9vmxhf0l766ni8nsdxpid4crra2wjd3"; - }) - ]; - nativeBuildInputs = [ gettext gobjectIntrospection wrapGAppsHook python3.pkgs.pip glibcLocales ]; buildInputs = [ gtk3 keybinder3 libnotify python3 vte ]; diff --git a/pkgs/applications/misc/gv/default.nix b/pkgs/applications/misc/gv/default.nix index 3fad634b18b7..b13e7ae5232c 100644 --- a/pkgs/applications/misc/gv/default.nix +++ b/pkgs/applications/misc/gv/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, Xaw3d, ghostscriptX, perl }: +{ stdenv, fetchurl, Xaw3d, ghostscriptX, perl, pkgconfig, libiconv }: let name = "gv-3.7.4"; @@ -11,7 +11,18 @@ stdenv.mkDerivation { sha256 = "0q8s43z14vxm41pfa8s5h9kyyzk1fkwjhkiwbf2x70alm6rv6qi1"; }; - buildInputs = [ Xaw3d ghostscriptX perl ]; + configureFlags = stdenv.lib.optionals stdenv.isDarwin [ + "--enable-SIGCHLD-fallback" + ]; + + buildInputs = [ + Xaw3d + ghostscriptX + perl + ] ++ stdenv.lib.optionals stdenv.isDarwin [ + pkgconfig + libiconv + ]; patchPhase = '' sed 's|\<gs\>|${ghostscriptX}/bin/gs|g' -i "src/"*.in @@ -32,6 +43,6 @@ stdenv.mkDerivation { license = stdenv.lib.licenses.gpl3Plus; maintainers = [ ]; - platforms = stdenv.lib.platforms.gnu; # arbitrary choice + platforms = stdenv.lib.platforms.unix; }; } diff --git a/pkgs/applications/misc/hyper/default.nix b/pkgs/applications/misc/hyper/default.nix index 9349c07a62e9..75d18c7a774d 100644 --- a/pkgs/applications/misc/hyper/default.nix +++ b/pkgs/applications/misc/hyper/default.nix @@ -12,11 +12,11 @@ let ]; in stdenv.mkDerivation rec { - version = "1.4.8"; + version = "2.0.0"; name = "hyper-${version}"; src = fetchurl { url = "https://github.com/zeit/hyper/releases/download/${version}/hyper_${version}_amd64.deb"; - sha256 = "0v31z3p5h3qr8likifbq9kk08fpfyf8g1hrz6f6v90z4b2yhkf51"; + sha256 = "04241kjy65pnp5q9z901910rmvcx18x0qaqfl31i0l4c2xj83ws0"; }; buildInputs = [ dpkg ]; unpackPhase = '' diff --git a/pkgs/applications/misc/jekyll/basic/Gemfile.lock b/pkgs/applications/misc/jekyll/basic/Gemfile.lock index d18546cb36f8..f231df3d8e76 100644 --- a/pkgs/applications/misc/jekyll/basic/Gemfile.lock +++ b/pkgs/applications/misc/jekyll/basic/Gemfile.lock @@ -23,7 +23,7 @@ GEM http_parser.rb (0.6.0) i18n (0.9.5) concurrent-ruby (~> 1.0) - jekyll (3.7.3) + jekyll (3.8.0) addressable (~> 2.4) colorator (~> 1.0) em-websocket (~> 0.5) @@ -36,9 +36,9 @@ GEM pathutil (~> 0.9) rouge (>= 1.7, < 4) safe_yaml (~> 1.0) - jekyll-avatar (0.5.0) + jekyll-avatar (0.6.0) jekyll (~> 3.0) - jekyll-mentions (1.2.0) + jekyll-mentions (1.3.0) activesupport (~> 4.0) html-pipeline (~> 2.3) jekyll (~> 3.0) @@ -69,13 +69,13 @@ GEM pathutil (0.16.1) forwardable-extended (~> 2.6) public_suffix (3.0.2) - rb-fsevent (0.10.2) + rb-fsevent (0.10.3) rb-inotify (0.9.10) ffi (>= 0.5.0, < 2) rouge (3.1.1) ruby_dep (1.5.0) safe_yaml (1.0.4) - sass (3.5.5) + sass (3.5.6) sass-listen (~> 4.0.0) sass-listen (4.0.0) rb-fsevent (~> 0.9, >= 0.9.4) diff --git a/pkgs/applications/misc/jekyll/basic/gemset.nix b/pkgs/applications/misc/jekyll/basic/gemset.nix index b5b21dec4382..7c6ac55c2012 100644 --- a/pkgs/applications/misc/jekyll/basic/gemset.nix +++ b/pkgs/applications/misc/jekyll/basic/gemset.nix @@ -104,28 +104,28 @@ dependencies = ["addressable" "colorator" "em-websocket" "i18n" "jekyll-sass-converter" "jekyll-watch" "kramdown" "liquid" "mercenary" "pathutil" "rouge" "safe_yaml"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "1k8pz95yiwxj6h645sxwckl227lah97lshv9xxrddhldxwf0n0ff"; + sha256 = "0fdb3qfbpjhlz5vlx4aw7kg9iy4bvaa5k1v82fxapyjghs2zg8as"; type = "gem"; }; - version = "3.7.3"; + version = "3.8.0"; }; jekyll-avatar = { dependencies = ["jekyll"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "0y2w7pnahkm3ddxrq589wv1w53ay7p1pvfs6khcmh6wq85r6wpsf"; + sha256 = "124624r83pmn7sp2idnsph9m1bbdiha5jnza4ypna8w2inpih51p"; type = "gem"; }; - version = "0.5.0"; + version = "0.6.0"; }; jekyll-mentions = { dependencies = ["activesupport" "html-pipeline" "jekyll"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "00nqm1ng4iiibmv4vx0ayzq7fqm2sm1af98r4ykvld6asqj5qkyd"; + sha256 = "11rfn2w9d50szbwbn3pajswjgcg85714d4d052mq2p803zg1i3mn"; type = "gem"; }; - version = "1.2.0"; + version = "1.3.0"; }; jekyll-sass-converter = { dependencies = ["sass"]; @@ -250,10 +250,10 @@ rb-fsevent = { source = { remotes = ["https://rubygems.org"]; - sha256 = "1fbpmjypwxkb8r7y1kmhmyp6gawa4byw0yb3jc3dn9ly4ld9lizf"; + sha256 = "1lm1k7wpz69jx7jrc92w3ggczkjyjbfziq5mg62vjnxmzs383xx8"; type = "gem"; }; - version = "0.10.2"; + version = "0.10.3"; }; rb-inotify = { dependencies = ["ffi"]; @@ -292,10 +292,10 @@ dependencies = ["sass-listen"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "10401m2xlv6vaxfwzy4xxmk51ddcnkvwi918cw3jkki0qqdl7d8v"; + sha256 = "19wyzp9qsg8hdkkxlsv713w0qmy66qrdp0shj42587ssx4qhrlag"; type = "gem"; }; - version = "3.5.5"; + version = "3.5.6"; }; sass-listen = { dependencies = ["rb-fsevent" "rb-inotify"]; diff --git a/pkgs/applications/misc/jekyll/full/Gemfile.lock b/pkgs/applications/misc/jekyll/full/Gemfile.lock index 190f1d66479d..45bd34187ca9 100644 --- a/pkgs/applications/misc/jekyll/full/Gemfile.lock +++ b/pkgs/applications/misc/jekyll/full/Gemfile.lock @@ -22,7 +22,7 @@ GEM http_parser.rb (~> 0.6.0) eventmachine (1.2.5) execjs (2.7.0) - faraday (0.14.0) + faraday (0.15.0) multipart-post (>= 1.2, < 3) fast-stemmer (1.0.2) ffi (1.9.23) @@ -34,7 +34,7 @@ GEM http_parser.rb (0.6.0) i18n (0.9.5) concurrent-ruby (~> 1.0) - jekyll (3.7.3) + jekyll (3.8.0) addressable (~> 2.4) colorator (~> 1.0) em-websocket (~> 0.5) @@ -47,7 +47,7 @@ GEM pathutil (~> 0.9) rouge (>= 1.7, < 4) safe_yaml (~> 1.0) - jekyll-avatar (0.5.0) + jekyll-avatar (0.6.0) jekyll (~> 3.0) jekyll-coffeescript (1.1.1) coffee-script (~> 2.2) @@ -56,7 +56,7 @@ GEM jekyll (~> 3.3) jekyll-gist (1.5.0) octokit (~> 4.2) - jekyll-mentions (1.2.0) + jekyll-mentions (1.3.0) activesupport (~> 4.0) html-pipeline (~> 2.3) jekyll (~> 3.0) @@ -101,16 +101,16 @@ GEM public_suffix (3.0.2) pygments.rb (1.2.1) multi_json (>= 1.0.0) - rb-fsevent (0.10.2) + rb-fsevent (0.10.3) rb-inotify (0.9.10) ffi (>= 0.5.0, < 2) rdiscount (2.2.0.1) - rdoc (6.0.1) + rdoc (6.0.3) redcarpet (3.4.0) rouge (3.1.1) ruby_dep (1.5.0) safe_yaml (1.0.4) - sass (3.5.5) + sass (3.5.6) sass-listen (~> 4.0.0) sass-listen (4.0.0) rb-fsevent (~> 0.9, >= 0.9.4) diff --git a/pkgs/applications/misc/jekyll/full/gemset.nix b/pkgs/applications/misc/jekyll/full/gemset.nix index 3a115f8a4b0e..b45ea5b9d079 100644 --- a/pkgs/applications/misc/jekyll/full/gemset.nix +++ b/pkgs/applications/misc/jekyll/full/gemset.nix @@ -96,10 +96,10 @@ dependencies = ["multipart-post"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "1c3x3s8vb5nf7inyfvhdxwa4q3swmnacpxby6pish5fgmhws7zrr"; + sha256 = "1dv1vcxxyw4vy0r2diiml0r8zqk1csrksfxv8nkrw61xlf2daaaa"; type = "gem"; }; - version = "0.14.0"; + version = "0.15.0"; }; fast-stemmer = { source = { @@ -163,19 +163,19 @@ dependencies = ["addressable" "colorator" "em-websocket" "i18n" "jekyll-sass-converter" "jekyll-watch" "kramdown" "liquid" "mercenary" "pathutil" "rouge" "safe_yaml"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "1k8pz95yiwxj6h645sxwckl227lah97lshv9xxrddhldxwf0n0ff"; + sha256 = "0fdb3qfbpjhlz5vlx4aw7kg9iy4bvaa5k1v82fxapyjghs2zg8as"; type = "gem"; }; - version = "3.7.3"; + version = "3.8.0"; }; jekyll-avatar = { dependencies = ["jekyll"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "0y2w7pnahkm3ddxrq589wv1w53ay7p1pvfs6khcmh6wq85r6wpsf"; + sha256 = "124624r83pmn7sp2idnsph9m1bbdiha5jnza4ypna8w2inpih51p"; type = "gem"; }; - version = "0.5.0"; + version = "0.6.0"; }; jekyll-coffeescript = { dependencies = ["coffee-script" "coffee-script-source"]; @@ -208,10 +208,10 @@ dependencies = ["activesupport" "html-pipeline" "jekyll"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "00nqm1ng4iiibmv4vx0ayzq7fqm2sm1af98r4ykvld6asqj5qkyd"; + sha256 = "11rfn2w9d50szbwbn3pajswjgcg85714d4d052mq2p803zg1i3mn"; type = "gem"; }; - version = "1.2.0"; + version = "1.3.0"; }; jekyll-paginate = { source = { @@ -413,10 +413,10 @@ rb-fsevent = { source = { remotes = ["https://rubygems.org"]; - sha256 = "1fbpmjypwxkb8r7y1kmhmyp6gawa4byw0yb3jc3dn9ly4ld9lizf"; + sha256 = "1lm1k7wpz69jx7jrc92w3ggczkjyjbfziq5mg62vjnxmzs383xx8"; type = "gem"; }; - version = "0.10.2"; + version = "0.10.3"; }; rb-inotify = { dependencies = ["ffi"]; @@ -438,10 +438,10 @@ rdoc = { source = { remotes = ["https://rubygems.org"]; - sha256 = "1vzhv04lp76iax258dh47zsxhjg34r9sg76vgikbyfywjzflvfyj"; + sha256 = "0ia6gq4fnwkm29j34yncg74w0nq5iyyrcjjhmkwzmzw9dbs0zy8a"; type = "gem"; }; - version = "6.0.1"; + version = "6.0.3"; }; redcarpet = { source = { @@ -479,10 +479,10 @@ dependencies = ["sass-listen"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "10401m2xlv6vaxfwzy4xxmk51ddcnkvwi918cw3jkki0qqdl7d8v"; + sha256 = "19wyzp9qsg8hdkkxlsv713w0qmy66qrdp0shj42587ssx4qhrlag"; type = "gem"; }; - version = "3.5.5"; + version = "3.5.6"; }; sass-listen = { dependencies = ["rb-fsevent" "rb-inotify"]; diff --git a/pkgs/applications/misc/jekyll/update.sh b/pkgs/applications/misc/jekyll/update.sh new file mode 100755 index 000000000000..528f1062c733 --- /dev/null +++ b/pkgs/applications/misc/jekyll/update.sh @@ -0,0 +1,15 @@ +#!/usr/bin/env nix-shell +#!nix-shell -i bash -p bundix zlib + +set -o errexit +set -o nounset + +readonly BASEDIR="$(dirname $(readlink -f $0))" + +for directory in "basic" "full"; do + pushd "$BASEDIR/$directory" + rm -f Gemfile.lock gemset.nix + bundix --magic + rm -rf .bundle vendor + popd +done diff --git a/pkgs/applications/misc/latte-dock/default.nix b/pkgs/applications/misc/latte-dock/default.nix index 1867ec3a9c62..eafe0b9b5c64 100644 --- a/pkgs/applications/misc/latte-dock/default.nix +++ b/pkgs/applications/misc/latte-dock/default.nix @@ -1,7 +1,7 @@ { mkDerivation, lib, cmake, xorg, plasma-framework, fetchFromGitHub , extra-cmake-modules, karchive, kwindowsystem, qtx11extras, kcrash }: -let version = "0.7.4"; in +let version = "0.7.5"; in mkDerivation { name = "latte-dock-${version}"; @@ -10,7 +10,7 @@ mkDerivation { owner = "psifidotos"; repo = "Latte-Dock"; rev = "v${version}"; - sha256 = "0w4fphgpdvql31wrypxyfahmr4cv5ap96wjc4270yyawnrqrx0y6"; + sha256 = "0fblbx6qk4miag1mhiyns7idsw03p9pj3xc3xxxnb5rpj1fy0ifv"; }; buildInputs = [ plasma-framework xorg.libpthreadstubs xorg.libXdmcp xorg.libSM ]; diff --git a/pkgs/applications/misc/masterpdfeditor/default.nix b/pkgs/applications/misc/masterpdfeditor/default.nix index 19a45e7d17be..5ea49f28afd8 100644 --- a/pkgs/applications/misc/masterpdfeditor/default.nix +++ b/pkgs/applications/misc/masterpdfeditor/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, glibc, sane-backends, qtbase, qtsvg, libXext, libX11, libXdmcp, libXau, libxcb }: let - version = "4.3.82"; + version = "4.3.89"; in stdenv.mkDerivation { name = "masterpdfeditor-${version}"; src = fetchurl { url = "http://get.code-industry.net/public/master-pdf-editor-${version}_qt5.amd64.tar.gz"; - sha256 = "0bfqnpg2p5jxygcahqqljyb0gd2z28hj5n1j9g1x7px8f7wwiwl4"; + sha256 = "0k5bzlhqglskiiq86nmy18mnh5bf2w3mr9cq3pibrwn5pisxnxxc"; }; libPath = stdenv.lib.makeLibraryPath [ stdenv.cc.cc diff --git a/pkgs/applications/misc/mediainfo/default.nix b/pkgs/applications/misc/mediainfo/default.nix index 18eb1800a7b1..dcc2a1bf43ce 100644 --- a/pkgs/applications/misc/mediainfo/default.nix +++ b/pkgs/applications/misc/mediainfo/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, autoreconfHook, pkgconfig, libzen, libmediainfo, zlib }: stdenv.mkDerivation rec { - version = "18.03"; + version = "18.03.1"; name = "mediainfo-${version}"; src = fetchurl { url = "https://mediaarea.net/download/source/mediainfo/${version}/mediainfo_${version}.tar.xz"; - sha256 = "171xv1qn6lbzybhx471j5a3rdqdj3xn0xc7gs181624r1kslxyn1"; + sha256 = "1mpwbqvw6awni5jq7i5yqvf6wgwjc37sl42q20rdq2agdlslqrkr"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; diff --git a/pkgs/applications/misc/minergate/default.nix b/pkgs/applications/misc/minergate/default.nix new file mode 100644 index 000000000000..acf0731f0aeb --- /dev/null +++ b/pkgs/applications/misc/minergate/default.nix @@ -0,0 +1,39 @@ +{ fetchurl, stdenv, dpkg, makeWrapper, fontconfig, freetype, openssl, xorg, xkeyboard_config }: + +assert stdenv.system == "x86_64-linux"; + +stdenv.mkDerivation rec { + version = "8.1"; + name = "minergate-${version}"; + src = fetchurl { + url = "https://minergate.com/download/ubuntu"; + sha256 = "1dbbbb8e0735cde239fca9e82c096dcc882f6cecda20bba7c14720a614c16e13"; + }; + + nativeBuildInputs = [ dpkg makeWrapper ]; + + phases = [ "installPhase" ]; + + installPhase = '' + dpkg-deb -x $src $out + pgm=$out/opt/minergate/minergate + + interpreter=${stdenv.glibc}/lib/ld-linux-x86-64.so.2 + patchelf --set-interpreter "$interpreter" $pgm + + wrapProgram $pgm --prefix LD_LIBRARY_PATH : ${stdenv.lib.makeLibraryPath [ fontconfig freetype openssl stdenv.cc.cc xorg.libX11 xorg.libxcb ]} --prefix "QT_XKB_CONFIG_ROOT" ":" "${xkeyboard_config}/share/X11/xkb" + + rm $out/usr/bin/minergate + mkdir -p $out/bin + ln -s $out/opt/minergate/minergate $out/bin + ''; + + meta = with stdenv.lib; { + description = "Minergate CPU/GPU mining software"; + homepage = https://www.minergate.com/; + license = licenses.unfree; + maintainers = with maintainers; [ bfortz ]; + platforms = [ "x86_64-linux" ]; +}; +} + diff --git a/pkgs/applications/misc/multimon-ng/default.nix b/pkgs/applications/misc/multimon-ng/default.nix index 953c4c1d9a94..99d511d413c0 100644 --- a/pkgs/applications/misc/multimon-ng/default.nix +++ b/pkgs/applications/misc/multimon-ng/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, qt4, qmake4Hook, libpulseaudio }: let - version = "1.1.4"; + version = "1.1.5"; in stdenv.mkDerivation { name = "multimon-ng-${version}"; @@ -9,7 +9,7 @@ stdenv.mkDerivation { owner = "EliasOenal"; repo = "multimon-ng"; rev = "${version}"; - sha256 = "12z6f0ra2k0qh56pcvnwvlxd3msvr6yr97jvs7w5kf42jqbxdsga"; + sha256 = "00h884hn5afrx5i52xmngpsv3204hgb7xpw9my3lm8sajmfrjj1g"; }; buildInputs = [ qt4 libpulseaudio ]; diff --git a/pkgs/applications/misc/onboard/default.nix b/pkgs/applications/misc/onboard/default.nix index d4847e4ce493..de64705d832b 100644 --- a/pkgs/applications/misc/onboard/default.nix +++ b/pkgs/applications/misc/onboard/default.nix @@ -88,6 +88,7 @@ in python3.pkgs.buildPythonApplication rec { nativeBuildInputs = [ glibcLocales + gobjectIntrospection # populate GI_TYPELIB_PATH intltool pkgconfig ]; diff --git a/pkgs/applications/misc/oneko/default.nix b/pkgs/applications/misc/oneko/default.nix index 4655b059b339..58e80e7f7264 100644 --- a/pkgs/applications/misc/oneko/default.nix +++ b/pkgs/applications/misc/oneko/default.nix @@ -28,7 +28,7 @@ stdenv.mkDerivation rec { homepage = "http://www.daidouji.com/oneko/"; license = licenses.publicDomain; maintainers = [ maintainers.xaverdh ]; - platforms = platforms.linux; + platforms = platforms.unix; }; } diff --git a/pkgs/applications/misc/orca/default.nix b/pkgs/applications/misc/orca/default.nix index 109c0afa12d0..e05cb0ad6f9d 100644 --- a/pkgs/applications/misc/orca/default.nix +++ b/pkgs/applications/misc/orca/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, pkgconfig, fetchurl, buildPythonApplication -, autoreconfHook, wrapGAppsHook +, autoreconfHook, wrapGAppsHook, gobjectIntrospection , intltool, yelp-tools, itstool, libxmlxx3 , python, pygobject3, gtk3, gnome3, substituteAll , at-spi2-atk, at-spi2-core, pyatspi, dbus, dbus-python, pyxdg @@ -10,7 +10,7 @@ with lib; let pname = "orca"; - version = "3.28.0"; + version = "3.28.1"; in buildPythonApplication rec { name = "${pname}-${version}"; @@ -18,7 +18,7 @@ in buildPythonApplication rec { src = fetchurl { url = "mirror://gnome/sources/${pname}/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1jy2zxs50ah1rg4zgiaj2l2sm1zyyvs37phws0hwmy3xd90ljfc2"; + sha256 = "04l5ccn7wf175gyq3blfpx0yh70ny06n161297jwc9idf951852g"; }; patches = [ @@ -30,11 +30,12 @@ in buildPythonApplication rec { nativeBuildInputs = [ autoreconfHook wrapGAppsHook pkgconfig libxmlxx3 - intltool yelp-tools itstool + intltool yelp-tools itstool gobjectIntrospection ]; propagatedBuildInputs = [ - pygobject3 pyatspi dbus-python pyxdg brltty liblouis speechd gst-python setproctitle + # TODO: re-add liblouis when it is fixed + pygobject3 pyatspi dbus-python pyxdg brltty speechd gst-python setproctitle ]; buildInputs = [ diff --git a/pkgs/applications/misc/pcmanfm/default.nix b/pkgs/applications/misc/pcmanfm/default.nix index 148dd427fbc7..a77b2d17ecb4 100644 --- a/pkgs/applications/misc/pcmanfm/default.nix +++ b/pkgs/applications/misc/pcmanfm/default.nix @@ -7,10 +7,10 @@ let inherit (stdenv.lib) optional; in stdenv.mkDerivation rec { - name = "pcmanfm-1.2.5"; + name = "pcmanfm-1.3.0"; src = fetchurl { url = "mirror://sourceforge/pcmanfm/${name}.tar.xz"; - sha256 = "0rxdh0dfzc84l85c54blq42gczygq8adhr3l9hqzy1dp530cm1hc"; + sha256 = "1ywgfyklms5hqkapsbjps4kyx20ac0d1qk16ww74yagkyfdkwsas"; }; buildInputs = [ glib gtk libfm' libX11 pango gnome3.defaultIconTheme ]; diff --git a/pkgs/applications/misc/qlcplus/default.nix b/pkgs/applications/misc/qlcplus/default.nix index e162d0d317f7..2fa4887a0f0f 100644 --- a/pkgs/applications/misc/qlcplus/default.nix +++ b/pkgs/applications/misc/qlcplus/default.nix @@ -5,13 +5,13 @@ mkDerivation rec { name = "qlcplus-${version}"; - version = "4.11.1"; + version = "4.11.2"; src = fetchFromGitHub { owner = "mcallegari"; repo = "qlcplus"; rev = "QLC+_${version}"; - sha256 = "0lb1mdp7kbnkja14phgyknr65irwkxcmzk96rqacysvwrvzvfzyd"; + sha256 = "0ry7j8d5mm3h3mzd49xqlagnldmfhfr6plwk73pz62hxr4j58s6w"; }; nativeBuildInputs = [ qmake pkgconfig ]; diff --git a/pkgs/applications/misc/qmapshack/default.nix b/pkgs/applications/misc/qmapshack/default.nix index bc09d0b4d0ac..3b9e76aee4b8 100644 --- a/pkgs/applications/misc/qmapshack/default.nix +++ b/pkgs/applications/misc/qmapshack/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "qmapshack-${version}"; - version = "1.10.0"; + version = "1.11.1"; src = fetchurl { url = "https://bitbucket.org/maproom/qmapshack/downloads/${name}.tar.gz"; - sha256 = "10qk6c5myw5dhkbw7pcrx3900kiqhs32vy47xl2844nzb4fq2liw"; + sha256 = "0yqilfldmfw8m18jbkffv4ar1px6kjs0zlgb216bnhahcr1y8r9y"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/applications/misc/safeeyes/default.nix b/pkgs/applications/misc/safeeyes/default.nix index 7c3bda8c06de..d216a695a3c5 100644 --- a/pkgs/applications/misc/safeeyes/default.nix +++ b/pkgs/applications/misc/safeeyes/default.nix @@ -6,12 +6,12 @@ let inherit (python3Packages) python buildPythonApplication fetchPypi; in buildPythonApplication rec { name = "${pname}-${version}"; pname = "safeeyes"; - version = "2.0.2"; + version = "2.0.5"; namePrefix = ""; src = fetchPypi { inherit pname version; - sha256 = "1fx6zd4hnbc7gdpac6r7smxwdl1bifaxx3mnx0wrqfvhpnwr1ybv"; + sha256 = "1q52ncqn18wb3d42dzsm7lh301w6g053a685i1cnismvp86amvfl"; }; buildInputs = [ diff --git a/pkgs/applications/misc/sent/default.nix b/pkgs/applications/misc/sent/default.nix index 24e76500a6a5..9bbae33b3e41 100644 --- a/pkgs/applications/misc/sent/default.nix +++ b/pkgs/applications/misc/sent/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, farbfeld, libX11, libXft +{ stdenv, fetchurl, farbfeld, libX11, libXft, makeWrapper , patches ? [] }: stdenv.mkDerivation rec { @@ -9,7 +9,8 @@ stdenv.mkDerivation rec { sha256 = "0cxysz5lp25mgww73jl0mgip68x7iyvialyzdbriyaff269xxwvv"; }; - buildInputs = [ farbfeld libX11 libXft ]; + buildInputs = [ libX11 libXft ]; + nativeBuildInputs = [ makeWrapper ]; # unpacking doesn't create a directory sourceRoot = "."; @@ -17,6 +18,9 @@ stdenv.mkDerivation rec { inherit patches; installFlags = [ "PREFIX=$(out)" ]; + postInstall = '' + wrapProgram "$out/bin/sent" --prefix PATH : "${farbfeld}/bin" + ''; meta = with stdenv.lib; { description = "A simple plaintext presentation tool"; diff --git a/pkgs/applications/misc/simplenote/default.nix b/pkgs/applications/misc/simplenote/default.nix index 7fbf11573c49..513c5facc6b2 100644 --- a/pkgs/applications/misc/simplenote/default.nix +++ b/pkgs/applications/misc/simplenote/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "simplenote-${pkgver}"; - pkgver = "1.0.6"; + pkgver = "1.1.3"; src = fetchurl { - url = "https://github.com/Automattic/simplenote-electron/releases/download/v${pkgver}/Simplenote-linux-x64.${pkgver}.tar.gz"; - sha256 = "18wj880iw92yd57w781dqaj7iv9j3bqhyh2cbikqrl4m5w9xkla8"; + url = "https://github.com/Automattic/simplenote-electron/releases/download/v${pkgver}/Simplenote-linux-${pkgver}.tar.gz"; + sha256 = "1z92yyjmg3bgfqfdpnysf98h9hhhnqzdqqigwlmdmn3d7fy49kcf"; }; buildCommand = let @@ -20,6 +20,7 @@ xorg.libXrender xorg.libX11 xorg.libXext xorg.libXdamage xorg.libXtst xorg.libXcomposite xorg.libXi xorg.libXfixes xorg.libXrandr xorg.libXcursor libcap systemd libnotify libXScrnSaver gnome3.gconf + xorg.libxcb ]; libPathNative = lib.makeLibraryPath packages; diff --git a/pkgs/applications/misc/sleepyhead/default.nix b/pkgs/applications/misc/sleepyhead/default.nix new file mode 100644 index 000000000000..cf5c4625c952 --- /dev/null +++ b/pkgs/applications/misc/sleepyhead/default.nix @@ -0,0 +1,42 @@ +{ stdenv, fetchgit, qt5, zlib, libGLU, libX11 }: + +let + name = "sleepyhead-${version}"; + version = "1.0.0-beta-git"; +in stdenv.mkDerivation { + inherit name; + + src = fetchgit { + url = https://gitlab.com/sleepyhead/sleepyhead-code.git; + rev = "9e2329d8bca45693231b5e3dae80063717c24578"; + sha256 = "0448z8gyaxpgpnksg34lzmffj36jdpm0ir4xxa5gvzagkx0wk07h"; + }; + + buildInputs = [ + qt5.qtbase qt5.qtwebkit qt5.qtserialport + zlib + libGLU + libX11 + ]; + + patchPhase = '' + patchShebangs configure + ''; + + installPhase = '' + mkdir -p $out/bin + cp sleepyhead/SleepyHead $out/bin + ''; + + meta = with stdenv.lib; { + homepage = https://sleepyhead.jedimark.net/; + description = "Review and explore data produced by CPAP and related machines"; + longDescription = '' + SleepyHead is cross platform, opensource sleep tracking program for reviewing CPAP and Oximetry data, which are devices used in the treatment of Sleep Disorders like Obstructive Sleep Apnea. + ''; + license = licenses.gpl3; + platforms = platforms.all; + maintainers = [ maintainers.krav ]; + }; + +} diff --git a/pkgs/applications/misc/slic3r-prusa3d/default.nix b/pkgs/applications/misc/slic3r/prusa3d.nix index 3a55ea6205ec..1ee2bfab94c3 100644 --- a/pkgs/applications/misc/slic3r-prusa3d/default.nix +++ b/pkgs/applications/misc/slic3r/prusa3d.nix @@ -52,6 +52,7 @@ stdenv.mkDerivation rec { ClassXSAccessor EncodeLocale ExtUtilsMakeMaker + ExtUtilsTypemapsDefault ExtUtilsXSpp GrowlGNTP ImportInto @@ -62,7 +63,7 @@ stdenv.mkDerivation rec { MathConvexHullMonotoneChain MathGeometryVoronoi MathPlanePath - ModuleBuild + ModuleBuildWithXSpp Moo NetDBus OpenGL diff --git a/pkgs/applications/misc/slstatus/default.nix b/pkgs/applications/misc/slstatus/default.nix index bc855db29ecc..f4a2e889cd43 100644 --- a/pkgs/applications/misc/slstatus/default.nix +++ b/pkgs/applications/misc/slstatus/default.nix @@ -4,12 +4,12 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "slstatus-${version}"; - version = "unstable-2018-03-28"; + version = "unstable-2018-04-16"; src = fetchgit { url = https://git.suckless.org/slstatus; - rev = "faa52bdcc0221de2d8fae950e409a8ac5e05bfcd"; - sha256 = "0i8k7gjvx51y0mwxjlqhyk2dpvkb2d3y8x4l6ckdnyiy5632pn76"; + rev = "97ef7c2a1d67bb2c9c379e657fbc8e35acd6aafb"; + sha256 = "1777hgl10imk0l2sgnqgbkfchv1mpxrd82ninzwp7f1rgwchz36v"; }; configFile = optionalString (conf!=null) (writeText "config.def.h" conf); diff --git a/pkgs/applications/misc/terminator/default.nix b/pkgs/applications/misc/terminator/default.nix index 59ea70e3da2d..2fef852ace9f 100644 --- a/pkgs/applications/misc/terminator/default.nix +++ b/pkgs/applications/misc/terminator/default.nix @@ -1,8 +1,8 @@ -{ stdenv, fetchurl, pythonPackages, keybinder, vte, gettext, intltool, file, gtk3, gobjectIntrospection, cairo -, wrapGAppsHook, gnome3 +{ stdenv, fetchurl, python2, keybinder3, intltool, file, gtk3, gobjectIntrospection +, libnotify, wrapGAppsHook, gnome3 }: -pythonPackages.buildPythonApplication rec { +python2.pkgs.buildPythonApplication rec { name = "terminator-${version}"; version = "1.91"; @@ -11,13 +11,9 @@ pythonPackages.buildPythonApplication rec { sha256 = "95f76e3c0253956d19ceab2f8da709a496f1b9cf9b1c5b8d3cd0b6da3cc7be69"; }; - nativeBuildInputs = [ file intltool wrapGAppsHook ]; - buildInputs = [ gtk3 gnome3.vte gobjectIntrospection cairo ]; - - pythonPath = with pythonPackages; [ - pygobject3 vte keybinder notify gettext psutil - pycairo - ]; + nativeBuildInputs = [ file intltool wrapGAppsHook gobjectIntrospection ]; + buildInputs = [ gtk3 gnome3.vte libnotify keybinder3 ]; + propagatedBuildInputs = with python2.pkgs; [ pygobject3 psutil pycairo ]; postPatch = '' patchShebangs . diff --git a/pkgs/applications/misc/teseq/default.nix b/pkgs/applications/misc/teseq/default.nix new file mode 100644 index 000000000000..9502b3a0abe7 --- /dev/null +++ b/pkgs/applications/misc/teseq/default.nix @@ -0,0 +1,22 @@ +{ stdenv, fetchurl }: + +let + version = "1.1.1"; +in +stdenv.mkDerivation { + name = "teseq-${version}"; + + src = fetchurl { + url = "mirror://gnu/teseq/teseq-${version}.tar.gz"; + sha256 = "08ln005qciy7f3jhv980kfhhfmh155naq59r5ah9crz1q4mx5yrj"; + }; + + meta = { + homepage = https://www.gnu.org/software/teseq/; + description = "Escape sequence illuminator"; + license = stdenv.lib.licenses.gpl3; + + platforms = stdenv.lib.platforms.unix; + maintainers = [ stdenv.lib.maintainers.vaibhavsagar ]; + }; +} diff --git a/pkgs/applications/misc/urh/default.nix b/pkgs/applications/misc/urh/default.nix index d2463616d677..fa2f16166446 100644 --- a/pkgs/applications/misc/urh/default.nix +++ b/pkgs/applications/misc/urh/default.nix @@ -2,13 +2,13 @@ python3Packages.buildPythonApplication rec { name = "urh-${version}"; - version = "2.0.1"; + version = "2.0.2"; src = fetchFromGitHub { owner = "jopohl"; repo = "urh"; rev = "v${version}"; - sha256 = "0mnnrxm49s77s1qg7zbfciw0525ipsl010sciqdw8a22jg1rfjh8"; + sha256 = "1qqb31y65rd85rf3gvxxxy06hm89ary00km1ac84qz5bwm6n5fyb"; }; buildInputs = [ hackrf rtl-sdr ]; diff --git a/pkgs/applications/misc/xmr-stak/default.nix b/pkgs/applications/misc/xmr-stak/default.nix index 98b3af52d6ee..51fd2ee80648 100644 --- a/pkgs/applications/misc/xmr-stak/default.nix +++ b/pkgs/applications/misc/xmr-stak/default.nix @@ -1,19 +1,24 @@ -{ stdenv, lib, fetchFromGitHub, cmake, libuv, libmicrohttpd, openssl +{ stdenv, stdenvGcc6, lib +, fetchFromGitHub, cmake, libuv, libmicrohttpd, openssl , opencl-headers, ocl-icd, hwloc, cudatoolkit , devDonationLevel ? "0.0" , cudaSupport ? false , openclSupport ? true }: -stdenv.mkDerivation rec { +let + stdenv' = if cudaSupport then stdenvGcc6 else stdenv; +in + +stdenv'.mkDerivation rec { name = "xmr-stak-${version}"; - version = "2.3.0"; + version = "2.4.3"; src = fetchFromGitHub { owner = "fireice-uk"; repo = "xmr-stak"; rev = "${version}"; - sha256 = "1iisy73pi4xx3vmqvy6whdzb566jqyjx4pdyx0g35qjj8giflpc8"; + sha256 = "0plks4yyd9gjnfg7sfsgsvdgczkbghf5xjwb8bzv01f0fndn10r1"; }; NIX_CFLAGS_COMPILE = "-O3"; diff --git a/pkgs/applications/misc/xmrig-proxy/default.nix b/pkgs/applications/misc/xmrig/proxy.nix index 248f629f2e91..248f629f2e91 100644 --- a/pkgs/applications/misc/xmrig-proxy/default.nix +++ b/pkgs/applications/misc/xmrig/proxy.nix diff --git a/pkgs/applications/misc/xterm/default.nix b/pkgs/applications/misc/xterm/default.nix index d807e8eb9ed5..bcaf89797b44 100644 --- a/pkgs/applications/misc/xterm/default.nix +++ b/pkgs/applications/misc/xterm/default.nix @@ -3,14 +3,14 @@ }: stdenv.mkDerivation rec { - name = "xterm-331"; + name = "xterm-332"; src = fetchurl { urls = [ "ftp://ftp.invisible-island.net/xterm/${name}.tgz" "https://invisible-mirror.net/archives/xterm/${name}.tgz" ]; - sha256 = "047gk58hvj64974sg259ss5gixj7pac6halmjfz4cc6r1yimds4s"; + sha256 = "0zdjiik4ravc3zld5c9i2ndrvazjmwiwbgl2c21348762wki2jsx"; }; buildInputs = diff --git a/pkgs/applications/misc/yarssr/default.nix b/pkgs/applications/misc/yarssr/default.nix new file mode 100644 index 000000000000..cadf5ccb6a48 --- /dev/null +++ b/pkgs/applications/misc/yarssr/default.nix @@ -0,0 +1,68 @@ +{ +fetchFromGitHub, stdenv, lib, +autoreconfHook, intltool, pkgconfig, makeWrapper, pkgs, +perl, perlPackages, +gnome2 }: + +let + perlDeps = with perlPackages; [ + Glib Gtk2 Gnome2 Pango Cairo Gnome2Canvas Gnome2VFS Gtk2GladeXML Gtk2TrayIcon + XMLLibXML XMLSAXBase XMLParser XMLRSS + HTMLParser + DateTime DateTimeFormatMail DateTimeFormatW3CDTF DateTimeLocale DateTimeTimeZone + ParamsValidate + ModuleImplementation ModuleRuntime + TryTiny + ClassSingleton + URI + AnyEvent AnyEventHTTP + CommonSense + FileSlurp + JSON + Guard + LocaleGettext + ]; + libs = [ + stdenv.cc.cc.lib + pkgs.gtk2 + ]; +in +stdenv.mkDerivation rec { + version = "git-2017-12-01"; + name = "yarssr-${version}"; + + src = fetchFromGitHub { + owner = "JGRennison"; + repo = "yarssr"; + rev = "e70eb9fc6563599bfb91c6de6a79654de531c18d"; + sha256 = "0x7hz8x8qyp3i1vb22zhcnvwxm3jhmmmlr22jqc5b09vpmbw1l45"; + }; + + nativeBuildInputs = [ perl pkgs.gettext makeWrapper ]; + buildInputs = perlDeps ++ [gnome2.libglade]; + propagatedBuildInputs = libs ++ perlDeps; + + installPhase = '' + DESTDIR=$out make install + mv $out/usr/* $out/ + rm -R $out/usr + sed -i -r "s!use lib [^;]+;!use lib '$out/share/yarssr';!" $out/bin/yarssr + sed -i -r "s!$Yarssr::PREFIX = [^;]+;!$Yarssr::PREFIX = '$out';!" $out/bin/yarssr + sed -i -r "s!use Yarssr::Browser;!!" $out/share/yarssr/Yarssr/GUI.pm + chmod a+x $out/bin/yarssr + ''; + + postFixup = '' + wrapProgram $out/bin/yarssr \ + --prefix LD_LIBRARY_PATH : ${lib.makeLibraryPath libs} \ + --set PERL5LIB "${lib.makePerlPath perlDeps}" + ''; + + meta = with stdenv.lib; { + homepage = https://github.com/tsyrogit/zxcvbn-c; + description = "A fork of Yarssr (a RSS reader for the GNOME Tray) from http://yarssr.sf.net with various fixes."; + license = licenses.gpl1; + platforms = platforms.linux; + maintainers = with maintainers; [ xurei ]; + }; +} diff --git a/pkgs/applications/networking/browsers/chromium/common.nix b/pkgs/applications/networking/browsers/chromium/common.nix index 44310b054628..b591d5d7ba0c 100644 --- a/pkgs/applications/networking/browsers/chromium/common.nix +++ b/pkgs/applications/networking/browsers/chromium/common.nix @@ -144,29 +144,7 @@ let # https://git.archlinux.org/svntogit/packages.git/tree/trunk?h=packages/chromium # for updated patches and hints about build flags # (gentooPatch "<patch>" "0000000000000000000000000000000000000000000000000000000000000000") - ] ++ optionals (versionRange "65" "66") [ - (gentooPatch "chromium-stdint.patch" "037gjnc8h087g6dpxz53nqvzbpa9mq0z47h25vix9p62s9nhz2a8") - (gentooPatch "chromium-webrtc-r0.patch" "0wp4zivbv2wpgiwmiznbq1aw4w98mvwjvdy36cpfmnvr8yw430pd") - (gentooPatch "chromium-math.h-r0.patch" "0dlzbdj0lvp9qklgifsvgbn6p1ppxbl3hkwqqqfsw1d9jka9wy8x") - # To enable ChromeCast, go to chrome://flags and set "Load Media Router Component Extension" to Enabled - # Fixes Chromecast: https://bugs.chromium.org/p/chromium/issues/detail?id=734325 - (githubPatch "1517db71cccaec48a05cdf30208e0cba7ab9b9a8" "08ac502cwwb05ml3w4wzn66i5c2d1h22xs5rzszwlnhxckxfc0fk") - # GCC 7 fixes - (githubPatch "f64fadcd79aebe5ed893ecbf258d1123609d28f8" "1h255w1v327r08cnifs19s4bwmkinqjmdmbwihddc5dyl43sjnvv") - (githubPatch "4d8468a07f374c11425494271256151fb6fe0c34" "0kqqq8kj0zv5bi1n9mm0vnn8wsgi98mjmj7snpav21fh3pgiqjrm") - (githubPatch "ede5178322ccd297b0ad82ae4c59119ceaab9ea5" "0rsal0dy0yhgs4lhn8h1vy1s77xcssy4f5wals7hvrz5m08jqizj") - (githubPatch "7d721f438acb38db556ae9a9e6e8b718bd503216" "13lzvxm63zq3rd8p387ylq4bm9wr4r09vk2w4p81f838pf0v1kbj") - # Following commit doesn't apply cleanly to stable branch, replace with handcrafted one - #(githubPatch "4f2b52281ce1649ea8347489443965ad33262ecc" "1g59izkicn9cpcphamdgrijs306h5b9i7i4pmy134asn1ifiax5z") - ./patches/PlaybackImageProvider-copy-constructor.patch - # * base/optional.h - (githubPatch "f1c8789c71dbdaeeef98ecd52c9715495824e6b0" "0w3d82s10cl10r6zq9vpsscmdhbdkcy0vbdiqy5pvbr031nfxw5w") - (githubPatch "5cae9645215d02cb1f986a181a208f8a4817fc86" "052y0f9nwq6y6jh2gvr1pm8qdcqghyi3jj5svvrp5aqirlkwb7ri") - # * ConfigurationPolicyProviders - (githubPatch "1ee888aed9f9a6291570ce360bcdd2d06bcc68cb" "1bm34p3bsny44sk60j842ghhhx8qaibwpqnfnyndfj96f7nb2az0") - (githubPatch "76da73abaeede740fc97479c09c92a52972bc477" "03rkf514ddj9d32d3zfcnf96kzzdk6cwxvrqj8acyv93vp1hvckr") - #(gentooPatch "<patch>" "0000000000000000000000000000000000000000000000000000000000000000") - ] ++ optionals (versionRange "66" "67") [ + ] ++ optionals (versionRange "66" "67") [ (gentooPatch "chromium-webrtc-r0.patch" "0wp4zivbv2wpgiwmiznbq1aw4w98mvwjvdy36cpfmnvr8yw430pd") (gentooPatch "chromium-ffmpeg-r1.patch" "1k8agaqsvg0w0s6s5wh346ih02cc86vr0vwyshw2q9vafa0jvmq4") # GCC 7 fixes @@ -176,6 +154,11 @@ let (githubPatch "ba4141e451f4e0b1b19410b1b503bd32e150df06" "1cjxw1f9fin6z12b0mcxnxf2mdjb0n3chwz7mgvmp9yij8qhqnxj") (githubPatch "b34ed1e6524479d61ee944ebf6ca7389ea47e563" "1s13zw93nsyr259dzck6gbhg4x46qg5sg14djf4bvrrc6hlkiczw") (githubPatch "4f2b52281ce1649ea8347489443965ad33262ecc" "1g59izkicn9cpcphamdgrijs306h5b9i7i4pmy134asn1ifiax5z") + (fetchpatch { + ## see https://groups.google.com/a/chromium.org/forum/#!msg/chromium-packagers/So-ojMYOQdI/K66hndtdCAAJ + url = "https://bazaar.launchpad.net/~chromium-team/chromium-browser/bionic-stable/download/head:/addmissingblinktools-20180416203514-02f50sz15c2mn6ei-1/add-missing-blink-tools.patch"; + sha256 = "0dc4cmd05qjqyihrd4qb34kz0jlapjgah8bzgnvxf9m4791w062z"; + }) ] ++ optional enableWideVine ./patches/widevine.patch ++ optionals (stdenv.isAarch64 && versionRange "65" "66") [ ./patches/skia_buildfix.patch diff --git a/pkgs/applications/networking/browsers/chromium/patches/PlaybackImageProvider-copy-constructor.patch b/pkgs/applications/networking/browsers/chromium/patches/PlaybackImageProvider-copy-constructor.patch deleted file mode 100644 index a9b70ac50863..000000000000 --- a/pkgs/applications/networking/browsers/chromium/patches/PlaybackImageProvider-copy-constructor.patch +++ /dev/null @@ -1,89 +0,0 @@ ---- a/cc/raster/playback_image_provider.cc -+++ b/cc/raster/playback_image_provider.cc -@@ -20,7 +20,7 @@ - PlaybackImageProvider::PlaybackImageProvider( - ImageDecodeCache* cache, - const gfx::ColorSpace& target_color_space, -- base::Optional<Settings> settings) -+ base::Optional<Settings>&& settings) - : cache_(cache), - target_color_space_(target_color_space), - settings_(std::move(settings)) { -@@ -70,7 +70,10 @@ - } - - PlaybackImageProvider::Settings::Settings() = default; --PlaybackImageProvider::Settings::Settings(const Settings& other) = default; -+PlaybackImageProvider::Settings::Settings(PlaybackImageProvider::Settings&&) = -+ default; - PlaybackImageProvider::Settings::~Settings() = default; -+PlaybackImageProvider::Settings& PlaybackImageProvider::Settings::operator=( -+ PlaybackImageProvider::Settings&&) = default; - - } // namespace cc ---- a/cc/raster/playback_image_provider.h -+++ b/cc/raster/playback_image_provider.h -@@ -20,8 +20,10 @@ - public: - struct CC_EXPORT Settings { - Settings(); -- Settings(const Settings& other); -+ Settings(const Settings&) = delete; -+ Settings(Settings&&); - ~Settings(); -+ Settings& operator=(Settings&&); - - // The set of image ids to skip during raster. - PaintImageIdFlatSet images_to_skip; -@@ -34,7 +36,7 @@ - // If no settings are provided, all images are skipped during rasterization. - PlaybackImageProvider(ImageDecodeCache* cache, - const gfx::ColorSpace& target_color_space, -- base::Optional<Settings> settings); -+ base::Optional<Settings>&& settings); - ~PlaybackImageProvider() override; - - PlaybackImageProvider(PlaybackImageProvider&& other); ---- a/cc/raster/playback_image_provider_unittest.cc -+++ b/cc/raster/playback_image_provider_unittest.cc -@@ -84,7 +84,8 @@ TEST(PlaybackImageProviderTest, SkipsSomeImages) { - settings.emplace(); - settings->images_to_skip = {skip_image.stable_id()}; - -- PlaybackImageProvider provider(&cache, gfx::ColorSpace(), settings); -+ PlaybackImageProvider provider(&cache, gfx::ColorSpace(), -+ std::move(settings)); - provider.BeginRaster(); - - SkIRect rect = SkIRect::MakeWH(10, 10); -@@ -100,7 +101,8 @@ TEST(PlaybackImageProviderTest, RefAndUnrefDecode) { - - base::Optional<PlaybackImageProvider::Settings> settings; - settings.emplace(); -- PlaybackImageProvider provider(&cache, gfx::ColorSpace(), settings); -+ PlaybackImageProvider provider(&cache, gfx::ColorSpace(), -+ std::move(settings)); - provider.BeginRaster(); - - { -@@ -133,7 +135,8 @@ TEST(PlaybackImageProviderTest, AtRasterImages) { - settings.emplace(); - settings->at_raster_images = {draw_image1, draw_image2}; - -- PlaybackImageProvider provider(&cache, gfx::ColorSpace(), settings); -+ PlaybackImageProvider provider(&cache, gfx::ColorSpace(), -+ std::move(settings)); - - EXPECT_EQ(cache.refed_image_count(), 0); - provider.BeginRaster(); -@@ -158,7 +161,8 @@ TEST(PlaybackImageProviderTest, SwapsGivenFrames) { - settings.emplace(); - settings->image_to_current_frame_index = image_to_frame; - -- PlaybackImageProvider provider(&cache, gfx::ColorSpace(), settings); -+ PlaybackImageProvider provider(&cache, gfx::ColorSpace(), -+ std::move(settings)); - provider.BeginRaster(); - - SkIRect rect = SkIRect::MakeWH(10, 10); - diff --git a/pkgs/applications/networking/browsers/chromium/upstream-info.nix b/pkgs/applications/networking/browsers/chromium/upstream-info.nix index e30ec4228c8a..d55cc12c165a 100644 --- a/pkgs/applications/networking/browsers/chromium/upstream-info.nix +++ b/pkgs/applications/networking/browsers/chromium/upstream-info.nix @@ -1,18 +1,18 @@ # This file is autogenerated from update.sh in the same directory. { beta = { - sha256 = "18dampi62wwvscywvdz8lil0zhxdr4p6bhr4yv08arz029w356lc"; - sha256bin64 = "129jq8ynj4y81rhzxyyfcfpllq3a6ddhiy766zw28s7d43q4zca2"; - version = "66.0.3359.45"; + sha256 = "1mlfavs0m0lf60s42krqxqiyx73hdfd4r1mkjwv31p2gchsa7ibp"; + sha256bin64 = "067gpmiwnpdaqarkz740plg0ixpp7642xf4qqkq32w9v8flx3y57"; + version = "66.0.3359.117"; }; dev = { - sha256 = "09x7p83p188ms0awxj3kl9kdx796ns6m42smqd3jccnljx54jls2"; - sha256bin64 = "1aa24gvbf9awm59n05jkb4wy6ssr7fns4rl1hd2c66cq2d4mx3d8"; - version = "67.0.3377.1"; + sha256 = "0058g5dm5nfm7wdpd9y4fn0dmi8bq013l0ky5fsn4j7msm55rrg5"; + sha256bin64 = "1ag8kg3jjv6jsxdjq33h4ksqhhhfaz5aqw9jaaqhfma908c5mc9y"; + version = "67.0.3396.10"; }; stable = { - sha256 = "11w6wg862ixbgm7dpqag2lmbjknv83zlr9imd8zchvmrqr468rlk"; - sha256bin64 = "0r14w94aa7zg2i3zjpwvb7d6fg9yg0xkki7jzcpjmzwygy78fs16"; - version = "65.0.3325.181"; + sha256 = "1mlfavs0m0lf60s42krqxqiyx73hdfd4r1mkjwv31p2gchsa7ibp"; + sha256bin64 = "1ycfq6pqk7a9kyqf2112agcxav360rxbqqdc1yil0qkmz51i9zdg"; + version = "66.0.3359.117"; }; } diff --git a/pkgs/applications/networking/browsers/firefox-bin/default.nix b/pkgs/applications/networking/browsers/firefox-bin/default.nix index 3a6dd626ac69..5b01daeef510 100644 --- a/pkgs/applications/networking/browsers/firefox-bin/default.nix +++ b/pkgs/applications/networking/browsers/firefox-bin/default.nix @@ -174,6 +174,8 @@ stdenv.mkDerivation { passthru.ffmpegSupport = true; passthru.gssSupport = true; + # update with: + # $ nix-shell maintainers/scripts/update.nix --argstr package firefox-bin-unwrapped passthru.updateScript = import ./update.nix { inherit name channel writeScript xidel coreutils gnused gnugrep gnupg curl; baseUrl = diff --git a/pkgs/applications/networking/browsers/firefox/wrapper.nix b/pkgs/applications/networking/browsers/firefox/wrapper.nix index 8f07415db5f2..45917bf65c1e 100644 --- a/pkgs/applications/networking/browsers/firefox/wrapper.nix +++ b/pkgs/applications/networking/browsers/firefox/wrapper.nix @@ -132,8 +132,10 @@ let else for res in 16 32 48 64 128; do mkdir -p "$out/share/icons/hicolor/''${res}x''${res}/apps" - ln -s "${browser}/lib/"*"/browser/chrome/icons/default/default''${res}.png" \ + icon=( "${browser}/lib/"*"/browser/chrome/icons/default/default''${res}.png" ) + if [ -e "$icon" ]; then ln -s "$icon" \ "$out/share/icons/hicolor/''${res}x''${res}/apps/${browserName}.png" + fi done fi diff --git a/pkgs/applications/networking/browsers/palemoon/default.nix b/pkgs/applications/networking/browsers/palemoon/default.nix index f3eb38422c69..0c0ef501e996 100644 --- a/pkgs/applications/networking/browsers/palemoon/default.nix +++ b/pkgs/applications/networking/browsers/palemoon/default.nix @@ -10,14 +10,14 @@ stdenv.mkDerivation rec { name = "palemoon-${version}"; - version = "27.8.0"; + version = "27.8.3"; src = fetchFromGitHub { name = "palemoon-src"; owner = "MoonchildProductions"; repo = "Pale-Moon"; rev = version + "_Release"; - sha256 = "0b08rzn50jg59rnjzx6dvsmj5dikfjipnmvhpkimvr38v8q7wdar"; + sha256 = "1v3wliq8k5yq17ms214fhwka8x4l3sq8kja59dx4pbvczzb1zyzh"; }; desktopItem = makeDesktopItem { diff --git a/pkgs/applications/networking/c14/default.nix b/pkgs/applications/networking/c14/default.nix index 33a1e8a5c08e..242abc2ece79 100644 --- a/pkgs/applications/networking/c14/default.nix +++ b/pkgs/applications/networking/c14/default.nix @@ -1,17 +1,16 @@ { stdenv, buildGoPackage, fetchFromGitHub }: buildGoPackage rec { - name = "c14-cli-unstable-${version}"; - version = "2017-05-15"; - rev = "97f437ef5133f73edd551c883db3076c76cb1f6b"; + name = "c14-cli-${version}"; + version = "0.3"; goPackagePath = "github.com/online-net/c14-cli"; src = fetchFromGitHub { owner = "online-net"; repo = "c14-cli"; - inherit rev; - sha256 = "1b44bh0zhh6rhw4d3nprnnxhjgaskl9kzp2cvwwyli5svhjxrfdj"; + rev = "${version}"; + sha256 = "0b1piviy6vvdbak8y8bc24rk3c1fi67vv3352pmnzvrhsar2r5yf"; }; goDeps = ./deps.nix; diff --git a/pkgs/applications/networking/cluster/openshift/default.nix b/pkgs/applications/networking/cluster/openshift/default.nix index 3f7e0650e0d5..07c9e9ba6784 100644 --- a/pkgs/applications/networking/cluster/openshift/default.nix +++ b/pkgs/applications/networking/cluster/openshift/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchFromGitHub, fetchpatch, removeReferencesTo, which, go_1_9, go-bindata, makeWrapper, rsync +{ stdenv, lib, fetchFromGitHub, fetchpatch, removeReferencesTo, which, go_1_9, go-bindata, makeWrapper, rsync, utillinux , iptables, coreutils, kerberos, clang , components ? [ "cmd/oc" @@ -37,6 +37,18 @@ in stdenv.mkDerivation rec { patchPhase = '' patchShebangs ./hack + + substituteInPlace pkg/oc/bootstrap/docker/host/host.go \ + --replace 'nsenter --mount=/rootfs/proc/1/ns/mnt findmnt' \ + 'nsenter --mount=/rootfs/proc/1/ns/mnt ${utillinux}/bin/findmnt' + + substituteInPlace pkg/oc/bootstrap/docker/host/host.go \ + --replace 'nsenter --mount=/rootfs/proc/1/ns/mnt mount' \ + 'nsenter --mount=/rootfs/proc/1/ns/mnt ${utillinux}/bin/mount' + + substituteInPlace pkg/oc/bootstrap/docker/host/host.go \ + --replace 'nsenter --mount=/rootfs/proc/1/ns/mnt mkdir' \ + 'nsenter --mount=/rootfs/proc/1/ns/mnt ${utillinux}/bin/mount' ''; buildPhase = '' diff --git a/pkgs/applications/networking/cluster/spark/default.nix b/pkgs/applications/networking/cluster/spark/default.nix index 99b7566fc713..6401194eac20 100644 --- a/pkgs/applications/networking/cluster/spark/default.nix +++ b/pkgs/applications/networking/cluster/spark/default.nix @@ -1,20 +1,16 @@ -{ stdenv, fetchzip, makeWrapper, jre, pythonPackages +{ stdenv, fetchzip, makeWrapper, jre, pythonPackages, coreutils, hadoop , RSupport? true, R , mesosSupport ? true, mesos , version }: let - versionMap = { - "2.2.1" = { - hadoopVersion = "hadoop2.7"; - sparkSha256 = "10nxsf9a6hj1263sxv0cbdqxdb8mb4cl6iqq32ljq9ydvk32s99c"; - }; - }; + sha256 = { + "1.6.3" = "142hw73wf20d846l83ydx0yg7qj5qxywm4h7qrhwnd7lsy2sbnjf"; + "2.2.1" = "10nxsf9a6hj1263sxv0cbdqxdb8mb4cl6iqq32ljq9ydvk32s99c"; + }.${version}; in -with versionMap.${version}; - with stdenv.lib; stdenv.mkDerivation rec { @@ -22,15 +18,15 @@ stdenv.mkDerivation rec { name = "spark-${version}"; src = fetchzip { - url = "mirror://apache/spark/${name}/${name}-bin-${hadoopVersion}.tgz"; - sha256 = sparkSha256; + inherit sha256; + url = "mirror://apache/spark/${name}/${name}-bin-without-hadoop.tgz"; }; buildInputs = [ makeWrapper jre pythonPackages.python pythonPackages.numpy ] ++ optional RSupport R ++ optional mesosSupport mesos; - untarDir = "${name}-bin-${hadoopVersion}"; + untarDir = "${name}-bin-without-hadoop"; installPhase = '' mkdir -p $out/{lib/${untarDir}/conf,bin,/share/java} mv * $out/lib/${untarDir} @@ -42,6 +38,7 @@ stdenv.mkDerivation rec { cat > $out/lib/${untarDir}/conf/spark-env.sh <<- EOF export JAVA_HOME="${jre}" export SPARK_HOME="$out/lib/${untarDir}" + export SPARK_DIST_CLASSPATH=$(${hadoop}/bin/hadoop classpath) export PYSPARK_PYTHON="${pythonPackages.python}/bin/${pythonPackages.python.executable}" export PYTHONPATH="\$PYTHONPATH:$PYTHONPATH" ${optionalString RSupport @@ -53,6 +50,7 @@ stdenv.mkDerivation rec { for n in $(find $out/lib/${untarDir}/bin -type f ! -name "*.*"); do makeWrapper "$n" "$out/bin/$(basename $n)" + substituteInPlace "$n" --replace dirname ${coreutils.out}/bin/dirname done ln -s $out/lib/${untarDir}/lib/spark-assembly-*.jar $out/share/java ''; @@ -62,7 +60,7 @@ stdenv.mkDerivation rec { homepage = "http://spark.apache.org"; license = stdenv.lib.licenses.asl20; platforms = stdenv.lib.platforms.all; - maintainers = with maintainers; [ thoughtpolice offline ]; + maintainers = with maintainers; [ thoughtpolice offline kamilchm ]; repositories.git = git://git.apache.org/spark.git; }; } diff --git a/pkgs/applications/networking/dropbox-cli/default.nix b/pkgs/applications/networking/dropbox/cli.nix index d3141675b418..d3141675b418 100644 --- a/pkgs/applications/networking/dropbox-cli/default.nix +++ b/pkgs/applications/networking/dropbox/cli.nix diff --git a/pkgs/applications/networking/enhanced-ctorrent/default.nix b/pkgs/applications/networking/enhanced-ctorrent/default.nix index fedbfeb957ce..2cfde73a01a6 100644 --- a/pkgs/applications/networking/enhanced-ctorrent/default.nix +++ b/pkgs/applications/networking/enhanced-ctorrent/default.nix @@ -1,13 +1,26 @@ -{ stdenv, fetchurl }: +{ stdenv, fetchurl, fetchpatch }: stdenv.mkDerivation rec { version = "dnh3.3.2"; name = "enhanced-ctorrent"; + src = fetchurl { url = "http://www.rahul.net/dholmes/ctorrent/ctorrent-dnh3.3.2.tar.gz"; sha256 = "0qs8waqwllk56i3yy3zhncy7nsnhmf09a494p5siz4vm2k4ncwy8"; }; + # These patches come from Debian and fix CVE-2009-1759. + patches = [ + (fetchpatch { + url = "https://sources.debian.org/data/main/c/ctorrent/1.3.4.dnh3.3.2-5/debian/patches/cve-security-fix.diff"; + sha256 = "1qkzzm8sfspbcs10azmmif4qcr7pr8r38dsa2py84lsjm1yi3kls"; + }) + (fetchpatch { + url = "https://sources.debian.org/data/main/c/ctorrent/1.3.4.dnh3.3.2-5/debian/patches/FTBFS-fix.diff"; + sha256 = "1m3zh96xwqjjzsbg62f7kx0miams58nys1f484qhdn870b5x9p06"; + }) + ]; + meta = { description = "BitTorrent client written in C++"; longDescription = '' diff --git a/pkgs/applications/networking/gns3/default.nix b/pkgs/applications/networking/gns3/default.nix index 66bf843865e6..74287dc6af4e 100644 --- a/pkgs/applications/networking/gns3/default.nix +++ b/pkgs/applications/networking/gns3/default.nix @@ -1,7 +1,7 @@ { callPackage, stdenv }: let - stableVersion = "2.1.4"; + stableVersion = "2.1.5"; # Currently there is no preview version. previewVersion = stableVersion; addVersion = args: @@ -10,8 +10,8 @@ let in args // { inherit version branch; }; mkGui = args: callPackage (import ./gui.nix (addVersion args)) { }; mkServer = args: callPackage (import ./server.nix (addVersion args)) { }; - guiSrcHash = "03x9qgqs4y9swyipigviyscvlcfkb2v6iasc54nv07ks8srqwf93"; - serverSrcHash = "0qzx0y4mqxpn5xhzgr2865lvszhi6szdli1jq64gihwdy3bhli4f"; + guiSrcHash = "1d7pwm36bqjm0d021z5qnx49v8zf4yi9jn5hn6zlbiqbz53l1x7l"; + serverSrcHash = "002pqm4jcm5qbbw1vnhjdrgysh7d6xmdl66605wz1vbp7xn5s961"; in { guiStable = mkGui { stable = true; diff --git a/pkgs/applications/networking/instant-messengers/baresip/default.nix b/pkgs/applications/networking/instant-messengers/baresip/default.nix index 225d622c69f9..538e9a3786be 100644 --- a/pkgs/applications/networking/instant-messengers/baresip/default.nix +++ b/pkgs/applications/networking/instant-messengers/baresip/default.nix @@ -4,11 +4,11 @@ , gsm, speex, portaudio, spandsp, libuuid, ccache, libvpx }: stdenv.mkDerivation rec { - version = "0.5.8"; + version = "0.5.9"; name = "baresip-${version}"; src=fetchurl { url = "http://www.creytiv.com/pub/baresip-${version}.tar.gz"; - sha256 = "0qk6y83mm7cz4j66d7zy72l7890k7ifqnqbqnjd3bjfn1yjivwfr"; + sha256 = "02bf4fwirf3b7h3cr1jqm0xsjzza4fi9kg88424js2l0xywwzpgf"; }; nativeBuildInputs = [ pkgconfig ]; buildInputs = [zlib openssl libre librem diff --git a/pkgs/applications/networking/instant-messengers/dino/default.nix b/pkgs/applications/networking/instant-messengers/dino/default.nix index fd253c389a27..32808f720bf1 100644 --- a/pkgs/applications/networking/instant-messengers/dino/default.nix +++ b/pkgs/applications/networking/instant-messengers/dino/default.nix @@ -13,13 +13,13 @@ }: stdenv.mkDerivation rec { - name = "dino-unstable-2018-03-10"; + name = "dino-unstable-2018-04-19"; src = fetchFromGitHub { owner = "dino"; repo = "dino"; - rev = "4ccdc1d0920a93b313d81b4014b6f45efb49b1fe"; - sha256 = "0d9698zi09s107zva6cgip7xxmdby0zfmqvka4n0khxrsnii5awq"; + rev = "e80da806022d8aaa32f77f3c7f0333cc1c80829b"; + sha256 = "04z4k1s4ck6vmbzlbpiw096ny0wpj4zi3cd0iv9vb2iwdj22gibm"; fetchSubmodules = true; }; diff --git a/pkgs/applications/networking/instant-messengers/hipchat/default.nix b/pkgs/applications/networking/instant-messengers/hipchat/default.nix index e24ea5e6fb37..dd1ce2264d5f 100644 --- a/pkgs/applications/networking/instant-messengers/hipchat/default.nix +++ b/pkgs/applications/networking/instant-messengers/hipchat/default.nix @@ -4,7 +4,7 @@ let - version = "4.30.3.1670"; + version = "4.30.4.1672"; rpath = stdenv.lib.makeLibraryPath [ xdg_utils @@ -44,7 +44,7 @@ let if stdenv.system == "x86_64-linux" then fetchurl { url = "https://atlassian.artifactoryonline.com/atlassian/hipchat-apt-client/pool/HipChat4-${version}-Linux.deb"; - sha256 = "0alqzay6bvi7ybrrdk5r0xkg4sx6qjsqbgmr16bkqxncxhb215ay"; + sha256 = "1xrwndhbyhcmjcg8h1ib8lp1g51f7jxdhc6p7776zmhlfw94n3rx"; } else throw "HipChat is not supported on ${stdenv.system}"; diff --git a/pkgs/applications/networking/instant-messengers/nheko/default.nix b/pkgs/applications/networking/instant-messengers/nheko/default.nix index 90a546154d18..8405769582f7 100644 --- a/pkgs/applications/networking/instant-messengers/nheko/default.nix +++ b/pkgs/applications/networking/instant-messengers/nheko/default.nix @@ -47,13 +47,13 @@ let in stdenv.mkDerivation rec { name = "nheko-${version}"; - version = "0.3.0"; + version = "0.3.1"; src = fetchFromGitHub { owner = "mujx"; repo = "nheko"; rev = "v${version}"; - sha256 = "178z64vkl7nmr1amgsgvdcwipj8czp7vbvidxllxiwal21yvqpky"; + sha256 = "1dqd698p6wicz0x1lb6mzlwcp68sjkivanb9lwz3yy1mlmy8i3jn"; }; # This patch is likely not strictly speaking needed, but will help detect when diff --git a/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-discord/default.nix b/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-discord/default.nix new file mode 100644 index 000000000000..e41aea497a85 --- /dev/null +++ b/pkgs/applications/networking/instant-messengers/pidgin-plugins/purple-discord/default.nix @@ -0,0 +1,31 @@ +{ stdenv, fetchFromGitHub, pkgconfig, pidgin, json_glib }: + +stdenv.mkDerivation rec { + name = "purple-discord-${version}"; + version = "unstable-2018-04-10"; + + src = fetchFromGitHub { + owner = "EionRobb"; + repo = "purple-discord"; + rev = "9a97886d15a1f028de54b5e6fc54e784531063b0"; + sha256 = "0dc344zh1v4yh9c8javcw5ylzwc1wpx0ih8bww8p8cjmhr8kcl32"; + }; + + nativeBuildInputs = [ pkgconfig ]; + buildInputs = [ pidgin json_glib ]; + + makeFlags = [ + "DESTDIR=$(out)" + ]; + + PKG_CONFIG_PURPLE_PLUGINDIR = "/lib/purple-2"; + PKG_CONFIG_PURPLE_DATADIR = "/share"; + + meta = with stdenv.lib; { + homepage = https://github.com/EionRobb/purple-discord; + description = "Discord plugin for Pidgin"; + license = licenses.gpl3; + platforms = platforms.linux; + maintainers = with maintainers; [ sna ]; + }; +} diff --git a/pkgs/applications/networking/instant-messengers/pidgin-plugins/telegram-purple/default.nix b/pkgs/applications/networking/instant-messengers/pidgin-plugins/telegram-purple/default.nix index 68083a7b9d25..8527593c1a20 100644 --- a/pkgs/applications/networking/instant-messengers/pidgin-plugins/telegram-purple/default.nix +++ b/pkgs/applications/networking/instant-messengers/pidgin-plugins/telegram-purple/default.nix @@ -16,14 +16,14 @@ stdenv.mkDerivation rec { buildInputs = [ pidgin libwebp libgcrypt gettext ]; preConfigure = '' - sed -i "s|/etc/telegram-purple/server.tglpub|$out/lib/pidgin/server.tglpub|g" telegram-purple.c + sed -i "s|/etc/telegram-purple/server.tglpub|$out/lib/purple-2/server.tglpub|g" telegram-purple.c echo "#define GIT_COMMIT \"${builtins.substring 0 10 src.rev}\"" > commit.h ''; installPhase = '' - mkdir -p $out/lib/pidgin/ - cp bin/*.so $out/lib/pidgin/ #*/ - cp tg-server.tglpub $out/lib/pidgin/server.tglpub + mkdir -p $out/lib/purple-2/ + cp bin/*.so $out/lib/purple-2/ #*/ + cp tg-server.tglpub $out/lib/purple-2/server.tglpub mkdir -p $out/pixmaps/pidgin/protocols/{16,22,48} cp imgs/telegram16.png $out/pixmaps/pidgin/protocols/16 cp imgs/telegram22.png $out/pixmaps/pidgin/protocols/22 diff --git a/pkgs/applications/networking/instant-messengers/signal-desktop/beta.nix b/pkgs/applications/networking/instant-messengers/signal-desktop/beta.nix index f627479a3c04..7d6854460d63 100644 --- a/pkgs/applications/networking/instant-messengers/signal-desktop/beta.nix +++ b/pkgs/applications/networking/instant-messengers/signal-desktop/beta.nix @@ -83,5 +83,10 @@ in platforms = [ "x86_64-linux" ]; + # Marked as broken on 2018-04-17. Reason: The most recent version is + # 1.8.0-beta.1, while this is still 1.1.0-beta.5 (2017-12-09). The stable + # package (signal-desktop) should be used instead (currently at version + # 1.7.1, i.e. up-to-date). + broken = true; }; } diff --git a/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix b/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix index 74f784a1ba1a..d524be287cd2 100644 --- a/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix +++ b/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix @@ -40,13 +40,13 @@ in stdenv.mkDerivation rec { name = "signal-desktop-${version}"; - version = "1.6.1"; + version = "1.7.1"; src = if stdenv.system == "x86_64-linux" then fetchurl { url = "https://updates.signal.org/desktop/apt/pool/main/s/signal-desktop/signal-desktop_${version}_amd64.deb"; - sha256 = "0q2qzl84ifnhcn1qbq38fdpj8ry748h6dlzp2mdpkslsh8mc46as"; + sha256 = "02zx8ynbvvs260mrvqbsg0fi561da4ni3i9f4bjh53vqn92vhvvq"; } else throw "Signal for Desktop is not currently supported on ${stdenv.system}"; diff --git a/pkgs/applications/networking/instant-messengers/toxic/default.nix b/pkgs/applications/networking/instant-messengers/toxic/default.nix index e2e25be49f23..4934a7374058 100644 --- a/pkgs/applications/networking/instant-messengers/toxic/default.nix +++ b/pkgs/applications/networking/instant-messengers/toxic/default.nix @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { buildInputs = [ libtoxcore libsodium ncurses curl gdk_pixbuf libnotify - ] ++ stdenv.lib.optionals (!stdenv.isArm) [ + ] ++ stdenv.lib.optionals (!stdenv.isAarch32) [ openal libopus libvpx freealut libqrencode ]; nativeBuildInputs = [ pkgconfig libconfig ]; diff --git a/pkgs/applications/networking/instant-messengers/wire-desktop/default.nix b/pkgs/applications/networking/instant-messengers/wire-desktop/default.nix new file mode 100644 index 000000000000..9e946152c192 --- /dev/null +++ b/pkgs/applications/networking/instant-messengers/wire-desktop/default.nix @@ -0,0 +1,104 @@ +{ stdenv, lib, fetchurl, dpkg, makeDesktopItem, gnome2, atk, cairo, gdk_pixbuf, glib +, freetype, fontconfig, dbus, libnotify, libX11, xorg, libXi, libXcursor, libXdamage +, libXrandr, libXcomposite, libXext, libXfixes, libXrender, libXtst, libXScrnSaver +, nss, nspr, alsaLib, cups, expat, udev, xdg_utils, hunspell +}: +let + rpath = lib.makeLibraryPath [ + alsaLib + atk + cairo + cups + dbus + expat + fontconfig + freetype + gdk_pixbuf + glib + gnome2.GConf + gnome2.gtk + gnome2.pango + hunspell + libnotify + libX11 + libXcomposite + libXcursor + libXdamage + libXext + libXfixes + libXi + libXrandr + libXrender + libXScrnSaver + libXtst + nspr + nss + stdenv.cc.cc + udev + xdg_utils + xorg.libxcb + ]; + + version = "3.0.2816"; + + plat = { + "i686-linux" = "i386"; + "x86_64-linux" = "amd64"; + }.${stdenv.system}; + + sha256 = { + "i686-linux" = "1ds807j1b8dk9hrnzbg4g9mvn44abw24pxrqns9ai62mh3hvi65p"; + "x86_64-linux" = "13pyyp2c8q0v0ni2hzh2jnbd3i96q68314glbmy4kyh7vm9427lc"; + }.${stdenv.system}; + +in + stdenv.mkDerivation rec { + name = "wire-desktop-${version}"; + + src = fetchurl { + url = "https://wire-app.wire.com/linux/debian/pool/main/wire_${version}_${plat}.deb"; + inherit sha256; + }; + + desktopItem = makeDesktopItem { + name = "Wire"; + exec = "wire-desktop %U"; + icon = "wire-desktop"; + comment = "Secure messenger for everyone"; + desktopName = "Wire Desktop"; + genericName = "Secure messenger"; + categories = "Network;InstantMessaging;Chat;VideoConference"; + }; + + phases = [ "unpackPhase" "installPhase" ]; + nativeBuildInputs = [ dpkg ]; + unpackPhase = "dpkg-deb -x $src ."; + installPhase = '' + mkdir -p $out + cp -R opt $out + cp -R usr/share $out/share + + chmod -R g-w $out + + # Patch signal + patchelf --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \ + --set-rpath "${rpath}:$out/opt/wire-desktop" \ + "$out/opt/wire-desktop/wire-desktop" + + # Symlink to bin + mkdir -p $out/bin + ln -s "$out/opt/wire-desktop/wire-desktop" $out/bin/wire-desktop + + # Desktop file + mkdir -p $out/share/applications + cp ${desktopItem}/share/applications/* $out/share/applications + ''; + + meta = { + description = "A modern, secure messenger"; + homepage = https://wire.com/; + license = lib.licenses.gpl3; + maintainers = with lib.maintainers; [ worldofpeace ]; + platforms = [ "i686-linux" "x86_64-linux" ]; + }; + } diff --git a/pkgs/applications/networking/ipfs/default.nix b/pkgs/applications/networking/ipfs/default.nix index 74c19b07aaa9..4153d527b9ff 100644 --- a/pkgs/applications/networking/ipfs/default.nix +++ b/pkgs/applications/networking/ipfs/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "ipfs-${version}"; - version = "0.4.13"; + version = "0.4.14"; rev = "v${version}"; goPackagePath = "github.com/ipfs/go-ipfs"; @@ -10,7 +10,7 @@ buildGoPackage rec { extraSrcPaths = [ (fetchgx { inherit name src; - sha256 = "150lhf5999jz0nck5s0fs0fp3pgaj85s7dndh68h9caw1fwpwb4f"; + sha256 = "0gad5y5clkrk5jsjj9gmrlnx8kbn2vg50vka1b8jg7b55hdvvlcg"; }) ]; @@ -18,7 +18,7 @@ buildGoPackage rec { owner = "ipfs"; repo = "go-ipfs"; inherit rev; - sha256 = "103mlsnqfnnqxh4phr192haaiv98d1bwpvca1sqrxz1216r5x0ik"; + sha256 = "0wvjw8jziwhvfwhksg26qlj2irznl5bs2yll9jkv335pnwb5qi3v"; }; meta = with stdenv.lib; { diff --git a/pkgs/applications/networking/mailreaders/inboxer/default.nix b/pkgs/applications/networking/mailreaders/inboxer/default.nix index 95bdb6cb5813..c0f015944b0a 100644 --- a/pkgs/applications/networking/mailreaders/inboxer/default.nix +++ b/pkgs/applications/networking/mailreaders/inboxer/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { name = "inboxer-${version}"; - version = "1.0.4"; + version = "1.1.2"; meta = with stdenv.lib; { description = "Unofficial, free and open-source Google Inbox Desktop App"; @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://github.com/denysdovhan/inboxer/releases/download/v${version}/inboxer_${version}_amd64.deb"; - sha256 = "0i6qmrnga80q8s6dabfgh0fcdnc2wpj948za04zi1ajv4fjwjh0n"; + sha256 = "100185j10dj044mg5p9xlq7fj7n7xki9qw5xn845dgq0dpj8rkrm"; }; unpackPhase = '' diff --git a/pkgs/applications/networking/mailreaders/mutt/default.nix b/pkgs/applications/networking/mailreaders/mutt/default.nix index 03bfc711c430..bbd56b188dfd 100644 --- a/pkgs/applications/networking/mailreaders/mutt/default.nix +++ b/pkgs/applications/networking/mailreaders/mutt/default.nix @@ -27,11 +27,11 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "mutt-${version}"; - version = "1.9.4"; + version = "1.9.5"; src = fetchurl { url = "http://ftp.mutt.org/pub/mutt/${name}.tar.gz"; - sha256 = "1pxmw5yyizb9bqbai6lihv6zxmw0znjfb60zaldwh6hc6lkbzlgl"; + sha256 = "0lsp72lm3cw490x7lhzia7h8f591bab2mr7qpscaj22fmrj7wqdz"; }; patches = optional smimeSupport (fetchpatch { diff --git a/pkgs/applications/networking/newsreaders/quiterss/default.nix b/pkgs/applications/networking/newsreaders/quiterss/default.nix index d527279ab775..7bd50a47f813 100644 --- a/pkgs/applications/networking/newsreaders/quiterss/default.nix +++ b/pkgs/applications/networking/newsreaders/quiterss/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "quiterss-${version}"; - version = "0.18.9"; + version = "0.18.10"; src = fetchFromGitHub { owner = "QuiteRSS"; repo = "quiterss"; rev = "${version}"; - sha256 = "0n2rgzyxw6m29i8m8agri3cp5dbpjblhhyklvxsyzmkksnsxpw58"; + sha256 = "1bv5aw6fscrwlycirvzm6fvbwmg8lbd1ycldkwbvybhjyfjaxkpm"; }; nativeBuildInputs = [ pkgconfig qmake ]; diff --git a/pkgs/applications/networking/p2p/frostwire/frostwire-bin.nix b/pkgs/applications/networking/p2p/frostwire/frostwire-bin.nix index 4f885116bd82..84ed1ff92591 100644 --- a/pkgs/applications/networking/p2p/frostwire/frostwire-bin.nix +++ b/pkgs/applications/networking/p2p/frostwire/frostwire-bin.nix @@ -3,12 +3,12 @@ with stdenv.lib; stdenv.mkDerivation rec { - version = "6.6.3"; + version = "6.6.5"; name = "frostwire-${version}"; src = fetchurl { url = "http://dl.frostwire.com/frostwire/${version}/frostwire-${version}.noarch.tar.gz"; - sha256 = "0n1g0am3d2fxw4a4zzzyif1fal1x3xch9q7743jhkkm3mldl2grw"; + sha256 = "0qxh5288mxd7ksd3zl0i8avkyzh8lj06x3jqya8znfq1c1wg0fph"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/applications/networking/p2p/tixati/default.nix b/pkgs/applications/networking/p2p/tixati/default.nix index 688f908c798c..9f47f8464a13 100644 --- a/pkgs/applications/networking/p2p/tixati/default.nix +++ b/pkgs/applications/networking/p2p/tixati/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "tixati-${version}"; - version = "2.55"; + version = "2.57"; src = fetchurl { url = "https://download2.tixati.com/download/tixati-${version}-1.x86_64.manualinstall.tar.gz"; - sha256 = "02mha6lfcb0mg0y977bxa6xg8krpbsbzpm4b5xw6y6wign4d8a8w"; + sha256 = "0z6znh62ry4fmc6c54zq79pk1b5bwkz93bxsfgvxpf6sajpyf9n7"; }; installPhase = '' diff --git a/pkgs/applications/networking/remote/freerdp/default.nix b/pkgs/applications/networking/remote/freerdp/default.nix index 59ae225210ca..872d9b018ff7 100644 --- a/pkgs/applications/networking/remote/freerdp/default.nix +++ b/pkgs/applications/networking/remote/freerdp/default.nix @@ -1,9 +1,9 @@ { stdenv, lib, fetchFromGitHub, cmake, pkgconfig -, alsaLib, ffmpeg_2, glib, openssl, pcre, zlib +, alsaLib, ffmpeg, glib, openssl, pcre, zlib , libX11, libXcursor, libXdamage, libXext, libXi, libXinerama, libXrandr, libXrender, libXv , libxkbcommon, libxkbfile , wayland -, gstreamer, gst-plugins-base, gst-plugins-good +, gstreamer, gst-plugins-base, gst-plugins-good, libunwind, orc , libpulseaudio ? null , cups ? null , pcsclite ? null @@ -14,13 +14,13 @@ stdenv.mkDerivation rec { name = "freerdp-${version}"; - version = "2.0.0-rc1"; + version = "2.0.0-rc2"; src = fetchFromGitHub { owner = "FreeRDP"; repo = "FreeRDP"; rev = version; - sha256 = "0m28n3mq3ax0j6j3ai4pnlx3shg2ap0md0bxlqkhfv6civ9r11nn"; + sha256 = "01cm9g4xqihnnc5d2w1zs8gabkv59p7fyjwi1cwpzv6s198xwbfs"; }; # outputs = [ "bin" "out" "dev" ]; @@ -35,8 +35,8 @@ stdenv.mkDerivation rec { ''; buildInputs = with lib; [ - alsaLib cups ffmpeg_2 glib openssl pcre pcsclite libpulseaudio zlib - gstreamer gst-plugins-base gst-plugins-good + alsaLib cups ffmpeg glib openssl pcre pcsclite libpulseaudio zlib + gstreamer gst-plugins-base gst-plugins-good libunwind orc libX11 libXcursor libXdamage libXext libXi libXinerama libXrandr libXrender libXv libxkbcommon libxkbfile wayland diff --git a/pkgs/applications/networking/sync/backintime/qt4.nix b/pkgs/applications/networking/sync/backintime/qt4.nix index ef8f02827498..b8f388c63eb5 100644 --- a/pkgs/applications/networking/sync/backintime/qt4.nix +++ b/pkgs/applications/networking/sync/backintime/qt4.nix @@ -1,7 +1,7 @@ {stdenv, fetchurl, makeWrapper, gettext, pkgconfig, libtool, backintime-common, python3, python3Packages }: stdenv.mkDerivation rec { - inherit (backintime-common) version src installFlags meta; + inherit (backintime-common) version src installFlags; name = "backintime-qt4-${version}"; @@ -22,4 +22,7 @@ stdenv.mkDerivation rec { --prefix PATH : "${backintime-common}/bin:$PATH" ''; + meta = with stdenv.lib; { + broken = true; + }; } diff --git a/pkgs/applications/networking/testssl/default.nix b/pkgs/applications/networking/testssl/default.nix index 97c05dfafdbe..5a548d5ff65f 100644 --- a/pkgs/applications/networking/testssl/default.nix +++ b/pkgs/applications/networking/testssl/default.nix @@ -1,9 +1,8 @@ -{ stdenv, fetchFromGitHub, pkgs }: +{ stdenv, fetchFromGitHub, makeWrapper, lib +, dnsutils, coreutils, openssl, nettools, utillinux, procps }: let - version = "2.9.5-4"; - pwdBinPath = "${stdenv.lib.makeBinPath (with pkgs; [ coreutils ])}/pwd"; - opensslBinPath = "${stdenv.lib.makeBinPath (with pkgs; [ openssl ])}/openssl"; + version = "2.9.5-5"; in stdenv.mkDerivation rec { name = "testssl.sh-${version}"; @@ -12,22 +11,32 @@ in stdenv.mkDerivation rec { owner = "drwetter"; repo = "testssl.sh"; rev = "v${version}"; - sha256 = "0pfp7r4jhvkh06vawqlvq7vp4imwp6dpq6jx8m0k3j85ywwp45pd"; + sha256 = "0zgj9vhd8fv3a1cn8dxqmjd8qmgryc867gq7zbvbr41lkqc06a1r"; }; - patches = [ ./testssl.patch ]; + nativeBuildInputs = [ makeWrapper ]; + buildInputs = [ + coreutils # for pwd and printf + dnsutils # for dig + nettools # for hostname + openssl # for openssl + procps # for ps + utillinux # for hexdump + ]; postPatch = '' substituteInPlace testssl.sh \ - --replace /bin/pwd ${pwdBinPath} \ - --replace TESTSSL_INSTALL_DIR:-\"\" TESTSSL_INSTALL_DIR:-\"$out\" \ - --replace @@openssl-path@@ ${opensslBinPath} + --replace /bin/pwd pwd \ + --replace TESTSSL_INSTALL_DIR:-\"\" TESTSSL_INSTALL_DIR:-\"$out\" ''; installPhase = '' - mkdir -p $out/bin $out/etc - cp -r etc/ $out/ - cp testssl.sh $out/bin/testssl.sh + install -Dt $out/bin testssl.sh + + wrapProgram $out/bin/testssl.sh \ + --prefix PATH ':' ${lib.makeBinPath buildInputs} + + cp -r etc $out ''; meta = with stdenv.lib; { @@ -38,6 +47,6 @@ in stdenv.mkDerivation rec { ''; homepage = https://testssl.sh/; license = licenses.gpl2; - maintainers = [ maintainers.etu ]; + maintainers = with maintainers; [ etu ]; }; } diff --git a/pkgs/applications/networking/testssl/testssl.patch b/pkgs/applications/networking/testssl/testssl.patch deleted file mode 100644 index ffc9e4b1c163..000000000000 --- a/pkgs/applications/networking/testssl/testssl.patch +++ /dev/null @@ -1,10 +0,0 @@ ---- testssl/testssl.sh 2017-09-24 16:53:29.395263437 +0200 -+++ testssl-new/testssl.sh 2017-09-24 16:53:41.221154492 +0200 -@@ -165,6 +165,7 @@ - # following variables make use of $ENV, e.g. OPENSSL=<myprivate_path_to_openssl> ./testssl.sh <host> - # 0 means (normally) true here. Some of the variables are also accessible with a command line switch, see --help - declare -x OPENSSL OPENSSL_TIMEOUT -+OPENSSL=${OPENSSL:-"@@openssl-path@@"} - FAST_SOCKET=${FAST_SOCKET:-false} # EXPERIMENTAL feature to accelerate sockets -- DO NOT USE it for production - COLOR=${COLOR:-2} # 2: Full color, 1: b/w+positioning, 0: no ESC at all - COLORBLIND=${COLORBLIND:-false} # if true, swap blue and green in the output diff --git a/pkgs/applications/office/calligra/default.nix b/pkgs/applications/office/calligra/default.nix index 8449cdf05def..01014e6687cb 100644 --- a/pkgs/applications/office/calligra/default.nix +++ b/pkgs/applications/office/calligra/default.nix @@ -15,24 +15,16 @@ mkDerivation rec { pname = "calligra"; - version = "3.0.1"; + version = "3.1.0"; name = "${pname}-${version}"; src = fetchurl { url = "mirror://kde/stable/${pname}/${version}/${name}.tar.xz"; - sha256 = "1cjdd7sx1zhas6lhw0dzhrnki790jkf93f88wn6z9yrww32dsas5"; + sha256 = "0w782k0hprpb6viixnqz34sp0z5csv3prdby46z22qqkcipcs638"; }; enableParallelBuilding = true; - patches = [ - (fetchpatch { - name = "calligra-build-with-newer-kcalcore.patch"; - url = "https://github.com/KDE/calligra/commit/9a02a545e8606aa91aff2038da137226a9432e1a.diff"; - sha256 = "08xays41v6rfnc31vixf4vbz8zmi2x5lfnk7f82bm4sgmpgfxwa0"; - }) - ]; - nativeBuildInputs = [ extra-cmake-modules kdoctools makeWrapper ]; buildInputs = [ diff --git a/pkgs/applications/office/kexi/default.nix b/pkgs/applications/office/kexi/default.nix index 8463703c0179..2aa19dea1c24 100644 --- a/pkgs/applications/office/kexi/default.nix +++ b/pkgs/applications/office/kexi/default.nix @@ -9,12 +9,12 @@ mkDerivation rec { pname = "kexi"; - version = "3.0.2"; + version = "3.1.0"; name = "${pname}-${version}"; src = fetchurl { url = "mirror://kde/stable/${pname}/src/${name}.tar.xz"; - sha256 = "1fjvjifi5ygx5gs2lzfg22j0x3r7kl4wk5jll09r8gc3dfxaiblf"; + sha256 = "1ysj44qq75wglw4d080l3gfw47695gapf29scxhb1g3py55csmbd"; }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; diff --git a/pkgs/applications/office/libreoffice/still.nix b/pkgs/applications/office/libreoffice/still.nix index d1e80724aaf3..b4139d54af50 100644 --- a/pkgs/applications/office/libreoffice/still.nix +++ b/pkgs/applications/office/libreoffice/still.nix @@ -2,7 +2,7 @@ , CompressZlib, zlib, libjpeg, expat, pkgconfigUpstream, freetype, libwpd , libxml2, db, sablotron, curl, fontconfig, libsndfile, neon , bison, flex, zip, unzip, gtk3, gtk2, libmspack, getopt, file, cairo, which -, icu, boost, jdk, ant, cups, xorg, libcmis +, icu, boost, jdk, ant, cups, xorg, libcmis, carlito , openssl, gperf, cppunit, GConf, ORBit2, poppler , librsvg, gnome_vfs, libGLU_combined, bsh, CoinMP, libwps, libabw , autoconf, automake, openldap, bash, hunspell, librdf_redland, nss, nspr @@ -106,6 +106,11 @@ in stdenv.mkDerivation rec { # BLFS patch for Glibc 2.23 renaming isnan sed -ire "s@isnan@std::&@g" xmloff/source/draw/ximp3dscene.cxx + + # This is required as some cppunittests require fontconfig configured + cp "${fontsConf}" fonts.conf + sed -e '/include/i<include>${carlito}/etc/fonts/conf.d</include>' -i fonts.conf + export FONTCONFIG_FILE="$PWD/fonts.conf" ''; # fetch_Download_item tries to interpret the name as a variable name diff --git a/pkgs/applications/office/libreoffice/wrapper.sh b/pkgs/applications/office/libreoffice/wrapper.sh index 591b42515063..52cd91e8030e 100644 --- a/pkgs/applications/office/libreoffice/wrapper.sh +++ b/pkgs/applications/office/libreoffice/wrapper.sh @@ -3,21 +3,12 @@ export JAVA_HOME="${JAVA_HOME:-@jdk@}" export SAL_USE_VCLPLUGIN="${SAL_USE_VCLPLUGIN:-gen}" if uname | grep Linux > /dev/null && - ! ( test -n "$DBUS_SESSION_BUS_ADDRESS" && - test -n "$DBUS_SYSTEM_BUS_ADDRESS" ); then + ! ( test -n "$DBUS_SESSION_BUS_ADDRESS" ); then dbus_tmp_dir="/run/user/$(id -u)/libreoffice-dbus" mkdir "$dbus_tmp_dir" dbus_socket_dir="$(mktemp -d -p "$dbus_tmp_dir")" - cat "@dbus@/share/dbus-1/system.conf" | - grep -v '[<]user[>]messagebus' > "$dbus_socket_dir/system.conf" - if test -z "$DBUS_SESSION_BUS_ADDRESS"; then - "@dbus@"/bin/dbus-daemon --nopidfile --nofork --config-file "@dbus@"/share/dbus-1/session.conf --address "unix:path=$dbus_socket_dir/session" >&2 & - export DBUS_SESSION_BUS_ADDRESS="unix:path=$dbus_socket_dir/session" - fi - if test -z "$DBUS_SYSTEM_BUS_ADDRESS"; then - "@dbus@"/bin/dbus-daemon --nopidfile --nofork --config-file "$dbus_socket_dir/system.conf" --address "unix:path=$dbus_socket_dir/system" >&2 & - export DBUS_SYSTEM_BUS_ADDRESS="unix:path=$dbus_socket_dir/system" - fi + "@dbus@"/bin/dbus-daemon --nopidfile --nofork --config-file "@dbus@"/share/dbus-1/session.conf --address "unix:path=$dbus_socket_dir/session" >&2 & + export DBUS_SESSION_BUS_ADDRESS="unix:path=$dbus_socket_dir/session" fi "@libreoffice@/bin/$(basename "$0")" "$@" diff --git a/pkgs/applications/office/mendeley/default.nix b/pkgs/applications/office/mendeley/default.nix index a8664e6820a4..a0a825201524 100644 --- a/pkgs/applications/office/mendeley/default.nix +++ b/pkgs/applications/office/mendeley/default.nix @@ -44,14 +44,14 @@ let then "i386" else "amd64"; - shortVersion = "1.17.13-stable"; + shortVersion = "1.18-stable"; version = "${shortVersion}_${arch}"; url = "http://desktop-download.mendeley.com/download/apt/pool/main/m/mendeleydesktop/mendeleydesktop_${version}.deb"; sha256 = if stdenv.system == arch32 - then "0q4x62k00whmq8lskphpcxc610cvclxzcr5k0v7pxjxs9sx5yx43" - else "01ylyily1hip35z0d4qkdpbzp5yn4r015psc5773xsqlgrnlwjm3"; + then "046v1j4sc6m0bf89f52zsg8riygrhldplyih5p0cjhcsd45q6fx8" + else "072fppgxhiryb6m1fb4qvq8nbblx88xpknnklygch1sw0lyks69h"; deps = [ qtbase diff --git a/pkgs/applications/office/mendeley/update.nix b/pkgs/applications/office/mendeley/update.nix index 9ac82615c561..cb9ee02702dd 100644 --- a/pkgs/applications/office/mendeley/update.nix +++ b/pkgs/applications/office/mendeley/update.nix @@ -15,9 +15,9 @@ writeScript "update-mendeley" '' } amd64URL=$(follow https://www.mendeley.com/repositories/ubuntu/stable/amd64/mendeleydesktop-latest) - amd64V=$(basename $amd64URL|grep -m1 -o "[0-9]\+\.[0-9]\+\.[0-9]\+") + amd64V=$(basename $amd64URL|grep -m1 -o "[0-9]\+\.[0-9]\+\(\.[0-9]\+\)\?") i386URL=$(follow https://www.mendeley.com/repositories/ubuntu/stable/i386/mendeleydesktop-latest) - i386V=$(basename $i386URL|grep -m1 -o "[0-9]\+\.[0-9]\+\.[0-9]\+") + i386V=$(basename $i386URL|grep -m1 -o "[0-9]\+\.[0-9]\+\(\.[0-9]\+\)\?") echo "amd64 version: $amd64V" echo "i386 version: $i386V" diff --git a/pkgs/applications/office/todo.txt-cli/default.nix b/pkgs/applications/office/todo.txt-cli/default.nix index faecc3f4227b..77a602954438 100644 --- a/pkgs/applications/office/todo.txt-cli/default.nix +++ b/pkgs/applications/office/todo.txt-cli/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl }: let - version = "2.10"; + version = "2.11.0"; in stdenv.mkDerivation { name = "todo.txt-cli-${version}"; src = fetchurl { url = "https://github.com/ginatrapani/todo.txt-cli/releases/download/v${version}/todo.txt_cli-${version}.tar.gz"; - sha256 = "1agn4zzbizrrylvbfi053b5mpb39bvl1gzziw08xibzfdyi1g55m"; + sha256 = "0majx8lcvhh8ji54qi0sxr833wchdss95fjc92byd8g3lfz27rsz"; }; installPhase = '' diff --git a/pkgs/applications/science/astronomy/celestia/default.nix b/pkgs/applications/science/astronomy/celestia/default.nix index 328253c53437..589625cc18f9 100644 --- a/pkgs/applications/science/astronomy/celestia/default.nix +++ b/pkgs/applications/science/astronomy/celestia/default.nix @@ -56,12 +56,10 @@ stdenv.mkDerivation { patch -Np1 -i "${gcc47Patch}" ''; - configureFlags = "--with-gtk --with-lua=${lua}"; - CPPFLAGS = "-DNDEBUG"; - CFLAGS = "-O2 -fsigned-char"; - CXXFLAGS = "-O2 -fsigned-char"; - GTK_CFLAGS = "-I${gtk2.dev}/include/gtk-2.0 -I${gtk2.out}/lib/gtk-2.0/include -I${glib.dev}/include/glib-2.0 -I${glib.out}/lib/glib-2.0/include -I${cairo.dev}/include/cairo -I${pango.dev}/include/pango-1.0 -I${gdk_pixbuf.dev}/include/gdk-pixbuf-2.0 -I${atk.dev}/include/atk-1.0 -I${gtkglext}/include/gtkglext-1.0 -I${gtkglext}/lib/gtkglext-1.0/include"; - GTK_LIBS = "-lgtk-x11-2.0 -lgtkglext-x11-1.0 -lcairo -lgdk_pixbuf-2.0 -lpango-1.0 -lgobject-2.0"; + configureFlags = [ + "--with-gtk" + "--with-lua=${lua}" + ]; installPhase = ''make MKDIR_P="mkdir -p" install''; @@ -69,7 +67,7 @@ stdenv.mkDerivation { meta = { description = "Free space simulation"; - homepage = http://www.shatters.net/celestia/; + homepage = https://celestia.space/; license = stdenv.lib.licenses.gpl2; platforms = stdenv.lib.platforms.linux; diff --git a/pkgs/applications/science/biology/EZminc/default.nix b/pkgs/applications/science/biology/EZminc/default.nix new file mode 100644 index 000000000000..20d88eb3aafb --- /dev/null +++ b/pkgs/applications/science/biology/EZminc/default.nix @@ -0,0 +1,32 @@ +{ stdenv, fetchFromGitHub, cmake, libminc, bicpl, itk, fftwFloat, gsl }: + +stdenv.mkDerivation rec { pname = "EZminc"; + name = "${pname}-2017-08-29"; + + src = fetchFromGitHub { + owner = "BIC-MNI"; + repo = pname; + rev = "4e017236cb6e7f6e07507446b18b759c584b6fc3"; + sha256 = "1pg06x42pgsg7zy7dz9wf6ajakkm2n8by64lg9z64qi8qqy82b8v"; + }; + + nativeBuildInputs = [ cmake ]; + buildInputs = [ itk libminc bicpl fftwFloat gsl ]; + + cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/" + "-DEZMINC_BUILD_TOOLS=TRUE" + "-DEZMINC_BUILD_MRFSEG=TRUE" + "-DEZMINC_BUILD_DD=TRUE" ]; + + checkPhase = "ctest --output-on-failure ../tests/"; # but ctest doesn't find the tests ... + + enableParallelBuilding = true; + + meta = with stdenv.lib; { + homepage = "https://github.com/BIC-MNI/${pname}"; + description = "Collection of Perl and shell scripts for processing MINC files"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.unix; + license = licenses.free; + }; +} diff --git a/pkgs/applications/science/biology/N3/default.nix b/pkgs/applications/science/biology/N3/default.nix new file mode 100644 index 000000000000..c14846beec2f --- /dev/null +++ b/pkgs/applications/science/biology/N3/default.nix @@ -0,0 +1,38 @@ +{ stdenv, fetchFromGitHub, cmake, makeWrapper, + perl, MNI-Perllib, GetoptTabular, + libminc, EBTKS }: + +stdenv.mkDerivation rec { + pname = "N3"; + name = "${pname}-2017-09-18"; + + src = fetchFromGitHub { + owner = "BIC-MNI"; + repo = pname; + rev = "2fdd939f0f2b24a4039bc6a8ade4a190a1d8e75d"; + sha256 = "13z21c4r09hna3q1csvcn4i7ws5ixbdaja6ch421xv6nydjh2w5g"; + }; + + nativeBuildInputs = [ cmake makeWrapper ]; + buildInputs = [ libminc EBTKS ]; + propagatedBuildInputs = [ perl MNI-Perllib GetoptTabular ]; + + cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/" "-DEBTKS_DIR=${EBTKS}/lib/" ]; + + checkPhase = "ctest --output-on-failure"; + # don't run the tests as they fail at least due to missing program wrappers in this phase ... + + postFixup = '' + for p in $out/bin/*; do + wrapProgram $p --prefix PERL5LIB : $PERL5LIB + done + ''; + + meta = with stdenv.lib; { + homepage = "https://github.com/BIC-MNI/${pname}"; + description = "MRI non-uniformity correction for MINC files"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.unix; + license = licenses.free; + }; +} diff --git a/pkgs/applications/science/biology/inormalize/default.nix b/pkgs/applications/science/biology/inormalize/default.nix new file mode 100644 index 000000000000..f17143ad06bb --- /dev/null +++ b/pkgs/applications/science/biology/inormalize/default.nix @@ -0,0 +1,39 @@ +{ stdenv, fetchFromGitHub, cmake, makeWrapper, + perl, GetoptTabular, MNI-Perllib, + libminc, EBTKS }: + +stdenv.mkDerivation rec { + pname = "inormalize"; + name = "${pname}-2014-10-21"; + + src = fetchFromGitHub { + owner = "BIC-MNI"; + repo = pname; + rev = "79cea9cdfe7b99abfd40afda89ab2253b596ad2f"; + sha256 = "1ahqv5q0ljvji99a5q8azjkdf6bgp6nr8lwivkqwqs3jm0k5clq7"; + }; + + patches = [ ./lgmask-interp.patch ./nu_correct_norm-interp.patch ]; + + nativeBuildInputs = [ cmake makeWrapper ]; + buildInputs = [ libminc EBTKS ]; + propagatedBuildInputs = [ perl GetoptTabular MNI-Perllib ]; + + cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/" "-DEBTKS_DIR=${EBTKS}/lib/" ]; + + checkPhase = "ctest --output-on-failure"; # but no tests + + postFixup = '' + for p in $out/bin/*; do + wrapProgram $p --prefix PERL5LIB : $PERL5LIB + done + ''; + + meta = with stdenv.lib; { + homepage = "https://github.com/BIC-MNI/${pname}"; + description = "Program to normalize intensity of MINC files"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.unix; + license = licenses.free; + }; +} diff --git a/pkgs/applications/science/biology/inormalize/lgmask-interp.patch b/pkgs/applications/science/biology/inormalize/lgmask-interp.patch new file mode 100644 index 000000000000..953bce9a1848 --- /dev/null +++ b/pkgs/applications/science/biology/inormalize/lgmask-interp.patch @@ -0,0 +1,10 @@ +diff --git a/lgmask.in b/lgmask.in +index 17dbe4d..2195d91 100644 +--- a/lgmask.in ++++ b/lgmask.in +@@ -1,4 +1,4 @@ +-#! @PERL@ ++#! /usr/bin/env perl + + #--------------------------------------------------------------------------- + #@COPYRIGHT : diff --git a/pkgs/applications/science/biology/inormalize/nu_correct_norm-interp.patch b/pkgs/applications/science/biology/inormalize/nu_correct_norm-interp.patch new file mode 100644 index 000000000000..75dc46a799ce --- /dev/null +++ b/pkgs/applications/science/biology/inormalize/nu_correct_norm-interp.patch @@ -0,0 +1,10 @@ +diff --git a/nu_correct_norm.in b/nu_correct_norm.in +index 1dc84ac..1bc6235 100644 +--- a/nu_correct_norm.in ++++ b/nu_correct_norm.in +@@ -1,4 +1,4 @@ +-#! @PERL@ ++#! /usr/bin/perl + + #--------------------------------------------------------------------------- + #@COPYRIGHT : diff --git a/pkgs/applications/science/biology/minc-tools/default.nix b/pkgs/applications/science/biology/minc-tools/default.nix index 7864658c9582..8e1f74686d1f 100644 --- a/pkgs/applications/science/biology/minc-tools/default.nix +++ b/pkgs/applications/science/biology/minc-tools/default.nix @@ -1,23 +1,29 @@ -{ stdenv, fetchFromGitHub, perl, cmake, flex, bison, libminc }: +{ stdenv, fetchFromGitHub, cmake, makeWrapper, flex, bison, perl, TextFormat, libminc, libjpeg, zlib }: stdenv.mkDerivation rec { - name = "${pname}-2.3.00"; pname = "minc-tools"; + name = "${pname}-2017-09-11"; src = fetchFromGitHub { - owner = "BIC-MNI"; - repo = pname; - rev = builtins.replaceStrings [ "." ] [ "-" ] name; - sha256 = "0px5paprx4ds9aln3jdg1pywszgyz2aykgkdbj1y8gc1lwcizsl9"; + owner = "BIC-MNI"; + repo = pname; + rev = "5b7c40425cd4f67a018055cb85c0157ee50a3056"; + sha256 = "0zkcs05svp1gj5h0cdgc0k20c7lrk8m7wg3ks3xc5mkaiannj8g7"; }; - nativeBuildInputs = [ cmake flex bison ] ++ (if doCheck then [ perl ] else [ ]); - buildInputs = [ libminc ]; + nativeBuildInputs = [ cmake flex bison makeWrapper ]; + buildInputs = [ libminc libjpeg zlib ]; + propagatedBuildInputs = [ perl TextFormat ]; cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/" ]; - checkPhase = "ctest"; - doCheck = false; + checkPhase = "ctest --output-on-failure"; # still some weird test failures though + + postFixup = '' + for prog in minccomplete minchistory mincpik; do + wrapProgram $out/bin/$prog --prefix PERL5LIB : $PERL5LIB + done + ''; enableParallelBuilding = true; @@ -26,5 +32,6 @@ stdenv.mkDerivation rec { description = "Command-line utilities for working with MINC files"; maintainers = with maintainers; [ bcdarwin ]; platforms = platforms.unix; + license = licenses.free; }; } diff --git a/pkgs/applications/science/biology/minc-widgets/default.nix b/pkgs/applications/science/biology/minc-widgets/default.nix new file mode 100644 index 000000000000..9084dfb2e1c3 --- /dev/null +++ b/pkgs/applications/science/biology/minc-widgets/default.nix @@ -0,0 +1,34 @@ +{ stdenv, fetchFromGitHub, cmake, makeWrapper, + perl, GetoptTabular, MNI-Perllib, + libminc, octave, coreutils, minc_tools }: + +stdenv.mkDerivation rec { + pname = "minc-widgets"; + name = "${pname}-2016-04-20"; + + + src = fetchFromGitHub { + owner = "BIC-MNI"; + repo = pname; + rev = "f08b643894c81a1a2e0fbfe595a17a42ba8906db"; + sha256 = "1b9g6lf37wpp211ikaji4rf74rl9xcmrlyqcw1zq3z12ji9y33bm"; + }; + + nativeBuildInputs = [ cmake makeWrapper ]; + buildInputs = [ libminc ]; + propagatedBuildInputs = [ perl GetoptTabular MNI-Perllib octave coreutils minc_tools ]; + + postFixup = '' + for p in $out/bin/*; do + wrapProgram $p --prefix PERL5LIB : $PERL5LIB --set PATH "${stdenv.lib.makeBinPath [ coreutils minc_tools ]}"; + done + ''; + + meta = with stdenv.lib; { + homepage = "https://github.com/BIC-MNI/${pname}"; + description = "Collection of Perl and shell scripts for processing MINC files"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.unix; + license = licenses.free; + }; +} diff --git a/pkgs/applications/science/biology/mni_autoreg/default.nix b/pkgs/applications/science/biology/mni_autoreg/default.nix new file mode 100644 index 000000000000..076ecd03a1b1 --- /dev/null +++ b/pkgs/applications/science/biology/mni_autoreg/default.nix @@ -0,0 +1,36 @@ +{ stdenv, fetchFromGitHub, cmake, makeWrapper, perl, GetoptTabular, MNI-Perllib, libminc }: + +stdenv.mkDerivation rec { + pname = "mni_autoreg"; + name = "${pname}-2017-09-22"; + + src = fetchFromGitHub { + owner = "BIC-MNI"; + repo = pname; + rev = "ab99e29987dc029737785baebf24896ec37a2d76"; + sha256 = "0axl069nv57vmb2wvqq7s9v3bfxwspzmk37bxm4973ai1irgppjq"; + }; + + nativeBuildInputs = [ cmake makeWrapper ]; + buildInputs = [ libminc ]; + propagatedBuildInputs = [ perl GetoptTabular MNI-Perllib ]; + + cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/" "-DBUILD_TESTING=FALSE" ]; + # testing broken: './minc_wrapper: Permission denied' from Testing/ellipse0.mnc + + postFixup = '' + for prog in autocrop mritoself mritotal xfmtool; do + echo $out/bin/$prog + wrapProgram $out/bin/$prog --prefix PERL5LIB : $PERL5LIB; + done + ''; + + meta = with stdenv.lib; { + homepage = https://github.com/BIC-MNI/mni_autoreg; + description = "Tools for automated registration using the MINC image format"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.unix; + license = licenses.free; + }; +} + diff --git a/pkgs/applications/science/biology/picard-tools/default.nix b/pkgs/applications/science/biology/picard-tools/default.nix index 3fc84228efe9..7af1669dc45e 100644 --- a/pkgs/applications/science/biology/picard-tools/default.nix +++ b/pkgs/applications/science/biology/picard-tools/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "picard-tools-${version}"; - version = "2.18.1"; + version = "2.18.2"; src = fetchurl { url = "https://github.com/broadinstitute/picard/releases/download/${version}/picard.jar"; - sha256 = "0wcihlgaif79r0fa47kq77igxzq0lpyn74414v9n6k9rl5nj8x1a"; + sha256 = "0w3b2jz4n9irslsg85r4x9dc3y4ziykn8fs4iqqiq4sfdcz259fz"; }; buildInputs = [ jre makeWrapper ]; diff --git a/pkgs/applications/science/biology/samtools/default.nix b/pkgs/applications/science/biology/samtools/default.nix index 365057414e99..87e708526ef7 100644 --- a/pkgs/applications/science/biology/samtools/default.nix +++ b/pkgs/applications/science/biology/samtools/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "${pname}-${version}"; pname = "samtools"; - version = "1.7"; + version = "1.8"; src = fetchurl { url = "https://github.com/samtools/samtools/releases/download/${version}/${name}.tar.bz2"; - sha256 = "e7b09673176aa32937abd80f95f432809e722f141b5342186dfef6a53df64ca1"; + sha256 = "05myg7bs90i68qbqab9cdg9rqj2xh39azibrx82ipzc5kcfvqhn9"; }; nativeBuildInputs = [ perl ]; diff --git a/pkgs/applications/science/chemistry/jmol/default.nix b/pkgs/applications/science/chemistry/jmol/default.nix new file mode 100644 index 000000000000..c85e1143d103 --- /dev/null +++ b/pkgs/applications/science/chemistry/jmol/default.nix @@ -0,0 +1,44 @@ +{ stdenv +, fetchurl +, unzip +, jre +}: + +stdenv.mkDerivation rec { + version = "${baseVersion}.${patchVersion}"; + baseVersion = "14.29"; + patchVersion = "12"; + pname = "jmol"; + name = "${pname}-${version}"; + + src = fetchurl { + url = "mirror://sourceforge/jmol/Jmol/Version%20${baseVersion}/Jmol%20${version}/Jmol-${version}-binary.tar.gz"; + sha256 = "1ndq9am75janshrnk26334z1nmyh3k4bp20napvf2zv0lfp8k3bv"; + }; + + buildInputs = [ + jre + ]; + + installPhase = '' + mkdir -p "$out/share/jmol" + mkdir -p "$out/bin" + + ${unzip}/bin/unzip jsmol.zip -d "$out/share/" + + sed -i -e 's|command=java|command=${jre}/bin/java|' jmol.sh + cp *.jar jmol.sh "$out/share/jmol" + ln -s $out/share/jmol/jmol.sh "$out/bin/jmol" + ''; + + enableParallelBuilding = true; + + meta = with stdenv.lib; { + description = "A Java 3D viewer for chemical structures"; + homepage = https://sourceforge.net/projects/jmol; + license = licenses.lgpl2; + platforms = platforms.all; + maintainers = with maintainers; [ timokau ]; + }; +} + diff --git a/pkgs/applications/science/chemistry/octopus/default.nix b/pkgs/applications/science/chemistry/octopus/default.nix index 2ff20fef40e8..bf8ccee4a635 100644 --- a/pkgs/applications/science/chemistry/octopus/default.nix +++ b/pkgs/applications/science/chemistry/octopus/default.nix @@ -3,7 +3,7 @@ }: let - version = "7.2"; + version = "7.3"; fftwAll = symlinkJoin { name ="ftw-dev-out"; paths = [ fftw.dev fftw.out ]; }; in stdenv.mkDerivation { @@ -11,7 +11,7 @@ in stdenv.mkDerivation { src = fetchurl { url = "http://www.tddft.org/programs/octopus/down.php?file=${version}/octopus-${version}.tar.gz"; - sha256 = "03zzmq72zdnjkhifbmlxs7ig7x6sf6mv8zv9mxhakm9hzwa9yn7m"; + sha256 = "0hnpqjjxdxh2ggf6ckrsy4hs9iglnazscb4siczddvmysi4kv15d"; }; nativeBuildInputs = [ perl procps fftw.dev ]; diff --git a/pkgs/applications/science/logic/coq/default.nix b/pkgs/applications/science/logic/coq/default.nix index 2c785472114a..2b35c91d10c4 100644 --- a/pkgs/applications/science/logic/coq/default.nix +++ b/pkgs/applications/science/logic/coq/default.nix @@ -22,7 +22,7 @@ let "8.7.0" = "1h18b7xpnx3ix9vsi5fx4zdcbxy7bhra7gd5c5yzxmk53cgf1p9m"; "8.7.1" = "0gjn59jkbxwrihk8fx9d823wjyjh5m9gvj9l31nv6z6bcqhgdqi8"; "8.7.2" = "0a0657xby8wdq4aqb2xsxp3n7pmc2w4yxjmrb2l4kccs1aqvaj4w"; - "8.8+beta1" = "19ipmx6bf8wjpk8y29hcginxk7hps4jh1bbihn5icx4qysm81165"; + "8.8.0" = "13a4fka22hdxsjk11mgjb9ffzplfxyxp1sg5v1c8nk1grxlscgw8"; }."${version}"; coq-version = builtins.substring 0 3 version; camlp5 = ocamlPackages.camlp5_strict; @@ -34,11 +34,9 @@ let self = stdenv.mkDerivation { name = "coq-${version}"; - inherit coq-version; - inherit camlp5; - inherit (ocamlPackages) ocaml; passthru = { - inherit (ocamlPackages) findlib num; + inherit coq-version camlp5; + inherit (ocamlPackages) ocaml findlib num; emacsBufferSetup = pkgs: '' ; Propagate coq paths to children (inherit-local-permanent coq-prog-name "${self}/bin/coqtop") @@ -125,8 +123,11 @@ self = stdenv.mkDerivation { buildFlags = "revision coq coqide bin/votour"; + createFindlibDestdir = true; + postInstall = '' cp bin/votour $out/bin/ + ln -s $out/lib/coq $OCAMLFIND_DESTDIR/coq ''; meta = with stdenv.lib; { diff --git a/pkgs/applications/science/logic/symbiyosys/default.nix b/pkgs/applications/science/logic/symbiyosys/default.nix index b6312bfe4668..98acebcf2cc5 100644 --- a/pkgs/applications/science/logic/symbiyosys/default.nix +++ b/pkgs/applications/science/logic/symbiyosys/default.nix @@ -32,6 +32,6 @@ stdenv.mkDerivation rec { homepage = https://symbiyosys.readthedocs.io/; license = stdenv.lib.licenses.mit; maintainers = with stdenv.lib.maintainers; [ thoughtpolice ]; - platforms = stdenv.lib.platforms.linux; + platforms = stdenv.lib.platforms.unix; }; } diff --git a/pkgs/applications/science/logic/tlaplus/tlaps.nix b/pkgs/applications/science/logic/tlaplus/tlaps.nix new file mode 100644 index 000000000000..9a78c1df8b17 --- /dev/null +++ b/pkgs/applications/science/logic/tlaplus/tlaps.nix @@ -0,0 +1,56 @@ +{ lib +, fetchurl +, makeWrapper +, stdenv +, ocaml, gawk, isabelle, cvc3, perl, wget, which +}: + +stdenv.mkDerivation rec { + name = "tlaps-${version}"; + version = "1.4.3"; + src = fetchurl { + url = "https://tla.msr-inria.inria.fr/tlaps/dist/current/tlaps-${version}.tar.gz"; + sha256 = "1w5z3ns5xxmhmp8r4x2kjmy3clqam935gmvx82imyxrr1bamx6gf"; + }; + + buildInputs = [ ocaml isabelle cvc3 perl wget which ]; + + phases = [ "unpackPhase" "installPhase" ]; + + installPhase = '' + mkdir -pv "$out" + export HOME="$out" + export PATH=$out/bin:$PATH + + pushd zenon + ./configure --prefix $out + make + make install + popd + + pushd isabelle + isabelle build -b Pure + popd + + pushd tlapm + ./configure --prefix $out + make all + make install + ''; + + meta = { + description = "Mechanically check TLA+ proofs"; + longDescription = '' + TLA+ is a general-purpose formal specification language that is + particularly useful for describing concurrent and distributed + systems. The TLA+ proof language is declarative, hierarchical, + and scalable to large system specifications. It provides a + consistent abstraction over the various “backend” verifiers. + ''; + homepage = https://tla.msr-inria.inria.fr/tlaps/content/Home.html; + license = stdenv.lib.licenses.bsd2; + platforms = stdenv.lib.platforms.unix; + maintainers = [ stdenv.lib.maintainers.badi ]; + }; + +} diff --git a/pkgs/applications/science/logic/tlaplus/toolbox.nix b/pkgs/applications/science/logic/tlaplus/toolbox.nix new file mode 100644 index 000000000000..5ce359dea0ec --- /dev/null +++ b/pkgs/applications/science/logic/tlaplus/toolbox.nix @@ -0,0 +1,77 @@ +{ lib, fetchzip, makeWrapper, makeDesktopItem, stdenv +, jre, swt, gtk, libXtst, glib +}: + +let + version = "1.5.6"; + arch = "x86_64"; + + desktopItem = makeDesktopItem rec { + name = "TLA+Toolbox"; + exec = "tla-toolbox"; + icon = "tla-toolbox"; + comment = "IDE for TLA+"; + desktopName = name; + genericName = comment; + categories = "Application;Development"; + extraEntries = '' + StartupWMClass=TLA+ Toolbox + ''; + }; + + +in stdenv.mkDerivation { + name = "tla-toolbox-${version}"; + src = fetchzip { + url = "https://tla.msr-inria.inria.fr/tlatoolbox/products/TLAToolbox-${version}-linux.gtk.${arch}.zip"; + sha256 = "1h63mcbrkf4jcg6qncpqffdi0x665z0wlfdq43d67p411xcqmbw9"; + }; + + buildInputs = [ makeWrapper ]; + + phases = [ "installPhase" ]; + + installPhase = '' + mkdir -p "$out/bin" + cp -r "$src" "$out/toolbox" + chmod +w "$out/toolbox" "$out/toolbox/toolbox" + + patchelf \ + --set-interpreter $(cat $NIX_CC/nix-support/dynamic-linker) \ + "$out/toolbox/toolbox" + + makeWrapper $out/toolbox/toolbox $out/bin/tla-toolbox \ + --run "set -x; cd $out/toolbox" \ + --add-flags "-data ~/.tla-toolbox" \ + --prefix PATH : "${jre}/bin" \ + --prefix LD_LIBRARY_PATH : "${swt}/lib:${gtk}/lib:${libXtst}/lib:${glib}/lib" + + echo -e "\nCreating TLA Toolbox icons..." + pushd "$src" + for icon_in in $(find . -path "./plugins/*/icons/full/etool16/tla_launch_check_wiz_*.png") + do + icon_size=$(echo $icon_in | grep -Po "wiz_\K[0-9]+") + icon_out="$out/share/icons/hicolor/$icon_size""x$icon_size/apps/tla-toolbox.png" + mkdir -p "$(dirname $icon_out)" + cp "$icon_in" "$icon_out" + done + popd + + echo -e "\nCreating TLA Toolbox desktop entry..." + cp -r "${desktopItem}/share/applications"* "$out/share/applications" + ''; + + meta = { + homepage = http://research.microsoft.com/en-us/um/people/lamport/tla/toolbox.html; + description = "IDE for the TLA+ tools"; + longDescription = '' + Integrated development environment for the TLA+ tools, based on Eclipse. You can use it + to create and edit your specs, run the PlusCal translator, view the pretty-printed + versions of your modules, run the TLC model checker, and run TLAPS, the TLA+ proof system. + ''; + # http://lamport.azurewebsites.net/tla/license.html + license = with lib.licenses; [ mit ]; + platforms = stdenv.lib.platforms.linux; + maintainers = [ stdenv.lib.maintainers.badi ]; + }; +} diff --git a/pkgs/applications/science/machine-learning/shogun/default.nix b/pkgs/applications/science/machine-learning/shogun/default.nix index e33b55503bd6..0ac40b1e7d42 100644 --- a/pkgs/applications/science/machine-learning/shogun/default.nix +++ b/pkgs/applications/science/machine-learning/shogun/default.nix @@ -52,6 +52,10 @@ stdenv.mkDerivation rec { ++ (optional (opencvSupport) "-DOpenCV=ON") ; + # Previous attempts to fix parallel builds (see patch above) were not entirely successful. + # Sporadic build failures still exist. Dislable parallel builds for now. + enableParallelBuilding = false; + meta = with stdenv.lib; { description = "A toolbox which offers a wide range of efficient and unified machine learning methods"; homepage = "http://shogun-toolbox.org/"; diff --git a/pkgs/applications/science/machine-learning/torch/torch-distro.nix b/pkgs/applications/science/machine-learning/torch/torch-distro.nix index 91adb5283fdc..a4247eac627b 100644 --- a/pkgs/applications/science/machine-learning/torch/torch-distro.nix +++ b/pkgs/applications/science/machine-learning/torch/torch-distro.nix @@ -131,6 +131,7 @@ let name = "sundown"; src = "${distro_src}/pkg/sundown"; rockspec = "rocks/${name}-scm-1.rockspec"; + meta.broken = true; # 2018-04-11 }; cwrap = buildLuaRocks rec { @@ -289,6 +290,7 @@ let rev = "1e9e4f1e0bf589a0ed39f58acc185ec5e213d207"; sha256 = "1i1fpy9v6r4w3lrmz7bmf5ppq65925rv90gx39b3pykfmn0hcb9c"; }; + meta.broken = true; # 2018-04-11 }; luuid = stdenv.mkDerivation rec { diff --git a/pkgs/applications/science/math/R/default.nix b/pkgs/applications/science/math/R/default.nix index a9b2de1a00c5..953f4e62c22b 100644 --- a/pkgs/applications/science/math/R/default.nix +++ b/pkgs/applications/science/math/R/default.nix @@ -7,11 +7,11 @@ }: stdenv.mkDerivation rec { - name = "R-3.4.4"; + name = "R-3.5.0"; src = fetchurl { url = "http://cran.r-project.org/src/base/R-3/${name}.tar.gz"; - sha256 = "0dq3jsnwsb5j3fhl0wi3p5ycv8avf8s5j1y4ap3d2mkjmcppvsdk"; + sha256 = "0w38865laqg28cdhikxdxhx4rfp0kgcn72gakwypsy91br9ja5zx"; }; buildInputs = [ @@ -65,7 +65,8 @@ stdenv.mkDerivation rec { installTargets = [ "install" "install-info" "install-pdf" ]; - doCheck = true; + doCheck = withRecommendedPackages; # R 3.5.0 fails the test suite if the + # recommended packages are not built preCheck = "export TZ=CET; bin/Rscript -e 'sessionInfo()'"; enableParallelBuilding = true; diff --git a/pkgs/applications/science/math/calc/default.nix b/pkgs/applications/science/math/calc/default.nix index efd38f053451..9d95960bde27 100644 --- a/pkgs/applications/science/math/calc/default.nix +++ b/pkgs/applications/science/math/calc/default.nix @@ -1,47 +1,49 @@ -{ stdenv, fetchurl, makeWrapper, glibc, readline, ncurses, utillinux }: +{ stdenv, lib, fetchurl, utillinux, makeWrapper +, enableReadline ? true, readline, ncurses }: -with stdenv.lib; -let - makeFlags = '' - INCDIR=${glibc.dev}/include \ - BINDIR=$out/bin LIBDIR=$out/lib CALC_INCDIR=$out/include/calc CALC_SHAREDIR=$out/share/calc MANDIR=$out/share/man/man1 \ - USE_READLINE=-DUSE_READLINE READLINE_LIB=-lreadline READLINE_EXTRAS='-lhistory -lncurses' \ - TERMCONTROL=-DUSE_TERMIOS \ - ''; -in stdenv.mkDerivation rec { - name = "calc-${version}"; version = "2.12.6.6"; src = fetchurl { - url = "https://github.com/lcn2/calc/releases/download/${version}/${name}.tar.bz2"; + urls = [ + "https://github.com/lcn2/calc/releases/download/${version}/${name}.tar.bz2" + "http://www.isthe.com/chongo/src/calc/${name}.tar.bz2" + ]; sha256 = "03sg1xhin6qsrz82scf96mmzw8lz1yj68rhj4p4npp4s0fawc9d5"; }; - buildInputs = [ makeWrapper readline ncurses utillinux ]; - - configurePhase = '' - sed -i 's/all: check_include/all:/' Makefile - ''; - - buildPhase = '' - make ${makeFlags} - ''; - - installPhase = '' - make install ${makeFlags} - wrapProgram $out/bin/calc --prefix LD_LIBRARY_PATH : $out/lib + patchPhase = '' + substituteInPlace Makefile \ + --replace 'all: check_include' 'all:' \ + --replace '-install_name ''${LIBDIR}/libcalc''${LIB_EXT_VERSION}' '-install_name ''${T}''${LIBDIR}/libcalc''${LIB_EXT_VERSION}' \ + --replace '-install_name ''${LIBDIR}/libcustcalc''${LIB_EXT_VERSION}' '-install_name ''${T}''${LIBDIR}/libcustcalc''${LIB_EXT_VERSION}' ''; - # Hack to avoid TMPDIR in RPATHs. - preFixup = ''rm -rf "$(pwd)" ''; - - meta = { + buildInputs = [ utillinux makeWrapper ] + ++ lib.optionals enableReadline [ readline ncurses ]; + + makeFlags = [ + "T=$(out)" + "INCDIR=${lib.getDev stdenv.cc.libc}/include" + "BINDIR=/bin" + "LIBDIR=/lib" + "CALC_SHAREDIR=/share/calc" + "CALC_INCDIR=/include" + "MANDIR=/share/man/man1" + + # Handle LDFLAGS defaults in calc + "DEFAULT_LIB_INSTALL_PATH=$(out)/lib" + ] ++ lib.optionals enableReadline [ + "READLINE_LIB=-lreadline" + "USE_READLINE=-DUSE_READLINE" + ]; + + meta = with lib; { description = "C-style arbitrary precision calculator"; homepage = http://www.isthe.com/chongo/tech/comp/calc/; license = licenses.lgpl21; - maintainers = [ ]; + maintainers = with maintainers; [ matthewbauer ]; platforms = platforms.all; }; } diff --git a/pkgs/applications/science/math/giac/default.nix b/pkgs/applications/science/math/giac/default.nix index 6acaa4067440..dd92e264889f 100644 --- a/pkgs/applications/science/math/giac/default.nix +++ b/pkgs/applications/science/math/giac/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, texlive, bison, flex +{ stdenv, fetchurl, fetchpatch, texlive, bison, flex , gmp, mpfr, pari, ntl, gsl, blas, mpfi, liblapackWithAtlas , readline, gettext, libpng, libao, gfortran, perl , enableGUI ? false, libGLU_combined ? null, xorg ? null, fltk ? null @@ -16,6 +16,15 @@ stdenv.mkDerivation rec { sha256 = "0dv5p5y6gkrsmz3xa7fw87rjyabwdwk09mqb09kb7gai9n9dgayk"; }; + patches = stdenv.lib.optionals (!enableGUI) [ + # when enableGui is false, giac is compiled without fltk. That means some + # outputs differ in the make check. Patch around this: + (fetchpatch { + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/giac/patches/nofltk-check.patch?id=7553a3c8dfa7bcec07241a07e6a4e7dcf5bb4f26"; + sha256 = "0xkmfc028vg5w6va04gp2x2iv31n8v4shd6vbyvk4blzgfmpj2cw"; + }) + ]; + postPatch = '' for i in doc/*/Makefile*; do substituteInPlace "$i" --replace "/bin/cp" "cp"; @@ -37,10 +46,11 @@ stdenv.mkDerivation rec { libGLU_combined fltk xorg.libX11 ]; - outputs = [ "out" ]; + outputs = [ "out" "doc" ]; + + doCheck = true; enableParallelBuilding = true; - hardeningDisable = [ "format" "bindnow" "relro" ]; configureFlags = [ "--enable-gc" "--enable-png" "--enable-gsl" "--enable-lapack" @@ -57,6 +67,13 @@ stdenv.mkDerivation rec { for file in $(find $out -name Makefile) ; do sed -i "s@/nix/store/[^/]*/bin/@@" "$file" ; done; + + # reference cycle + rm "$out/share/giac/doc/el/"{casinter,tutoriel}/Makefile + + mkdir -p "$doc/share/giac" + mv "$out/share/giac/doc" "$doc/share/giac" + mv "$out/share/giac/examples" "$doc/share/giac" ''; meta = with stdenv.lib; { diff --git a/pkgs/applications/science/math/lrcalc/default.nix b/pkgs/applications/science/math/lrcalc/default.nix new file mode 100644 index 000000000000..9e02b08c8ad0 --- /dev/null +++ b/pkgs/applications/science/math/lrcalc/default.nix @@ -0,0 +1,41 @@ +{ stdenv +, fetchFromBitbucket +, fetchpatch +, autoreconfHook +}: + +stdenv.mkDerivation rec { + version = "1.2"; + pname = "lrcalc"; + name = "${pname}-${version}"; + + src = fetchFromBitbucket { + owner = "asbuch"; + repo = "lrcalc"; + rev = "lrcalc-${version}"; + sha256 = "1c12d04jdyxkkav4ak8d1aqrv594gzihwhpxvc6p9js0ry1fahss"; + }; + + doCheck = true; + + nativeBuildInputs = [ + autoreconfHook + ]; + + patches = [ + # Fix include syntax: + # For private includes, use `#include "..."` instead of `#include <...>` + (fetchpatch { + url = "https://bitbucket.org/asbuch/lrcalc/commits/226981a0/raw/"; + sha256 = "02kaqx5s3l642rhh28kn2wg9wr098vzpknxyl4pv627lqa3lv9vm"; + }) + ]; + + meta = with stdenv.lib; { + description = "Littlewood-Richardson calculator"; + homepage = http://math.rutgers.edu/~asbuch/lrcalc/; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ timokau ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/science/math/mathematica/default.nix b/pkgs/applications/science/math/mathematica/default.nix index 1c86097f2ee4..9b9d5b250ef6 100644 --- a/pkgs/applications/science/math/mathematica/default.nix +++ b/pkgs/applications/science/math/mathematica/default.nix @@ -1,7 +1,7 @@ { stdenv , coreutils , patchelf -, requireFile +, callPackage , alsaLib , dbus , fontconfig @@ -18,6 +18,7 @@ , zlib , libxml2 , libuuid +, lang ? "en" }: let @@ -26,21 +27,15 @@ let "Linux" else throw "Mathematica requires i686-linux or x86_64 linux"; + + l10n = + with stdenv.lib; + with callPackage ./l10ns.nix {}; + flip (findFirst (l: l.lang == lang)) l10ns + (throw "Language '${lang}' not supported"); in stdenv.mkDerivation rec { - version = "11.2.0"; - - name = "mathematica-${version}"; - - src = requireFile rec { - name = "Mathematica_${version}_LINUX.sh"; - message = '' - This nix expression requires that ${name} is - already part of the store. Find the file on your Mathematica CD - and add it to the nix store with nix-store --add-fixed sha256 <FILE>. - ''; - sha256 = "4a1293cc1c404303aa1cab1bd273c7be151d37ac5ed928fbbb18e9c5ab2d8df9"; - }; + inherit (l10n) version name src; buildInputs = [ coreutils diff --git a/pkgs/applications/science/math/mathematica/l10ns.nix b/pkgs/applications/science/math/mathematica/l10ns.nix new file mode 100644 index 000000000000..2158021c7548 --- /dev/null +++ b/pkgs/applications/science/math/mathematica/l10ns.nix @@ -0,0 +1,33 @@ +{ lib, requireFile }: + +with lib; +{ + l10ns = flip map + [ + { + version = "11.2.0"; + lang = "en"; + language = "English"; + sha256 = "4a1293cc1c404303aa1cab1bd273c7be151d37ac5ed928fbbb18e9c5ab2d8df9"; + } + { + version = "11.2.0"; + lang = "ja"; + language = "Japanese"; + sha256 = "916392edd32bed8622238df435dd8e86426bb043038a3336f30df10d819b49b1"; + } + ] + ({ version, lang, language, sha256 }: { + inherit version lang; + name = "mathematica-${version}" + optionalString (lang != "en") "-${lang}"; + src = requireFile rec { + name = "Mathematica_${version}" + optionalString (lang != "en") "_${language}" + "_LINUX.sh"; + message = '' + This nix expression requires that ${name} is + already part of the store. Find the file on your Mathematica CD + and add it to the nix store with nix-store --add-fixed sha256 <FILE>. + ''; + inherit sha256; + }; + }); +} diff --git a/pkgs/applications/science/math/maxima/default.nix b/pkgs/applications/science/math/maxima/default.nix index c3eeddef6694..892b9d9520e3 100644 --- a/pkgs/applications/science/math/maxima/default.nix +++ b/pkgs/applications/science/math/maxima/default.nix @@ -69,6 +69,10 @@ stdenv.mkDerivation ({ url = "https://git.sagemath.org/sage.git/plain/build/pkgs/maxima/patches/maxima.system.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; sha256 = "18zafig8vflhkr80jq2ivk46k92dkszqlyq8cfmj0b2vcfjwwbar"; }) + # There are some transient test failures. I hope this disables all those tests. + # If those test failures ever happen in the non-ecl version, that should be + # reportetd upstream. + ./known-ecl-failures.patch ]; # Failures in the regression test suite won't abort the build process. We run diff --git a/pkgs/applications/science/math/maxima/known-ecl-failures.patch b/pkgs/applications/science/math/maxima/known-ecl-failures.patch new file mode 100644 index 000000000000..f1d612d993e6 --- /dev/null +++ b/pkgs/applications/science/math/maxima/known-ecl-failures.patch @@ -0,0 +1,21 @@ +diff --git a/tests/testsuite.lisp b/tests/testsuite.lisp +index 45a81f4..36c35b8 100644 +--- a/tests/testsuite.lisp ++++ b/tests/testsuite.lisp +@@ -25,13 +25,14 @@ + ((mlist simp) "rtest10" 24 25) + ((mlist) "rtest11" #+(or gcl cmucl ccl64) 158 #+(or gcl cmucl ccl64) 174 #+gcl 175) + "rtest13" "rtest13s" +- "rtest14" ++ ;; "rtest14" ;; some tests sometimes fail with ecl, hard to reproduce. Observed failing: 250, 267, 297, 307, 310, 312, 315, 319 + "rtest15" + ;; ccl versions 1.11 and earlier fail test 50. Mark it as a + ;; known failure. Presumably 1.12 will have this fixed. + ((mlist simp) "rtest16" #+ccl 50) + "rtestode" "rtestode_zp" +- "rtest3" "rtest8" ++ "rtest3" ++ ((mlist simp) "rtest8" 104) ;; fails with ecl + ((mlist simp) "rtest12" 76 78) + "rexamples" + ((mlist simp) "rtesthyp" 105 112 113 123 124 128) diff --git a/pkgs/applications/science/math/palp/default.nix b/pkgs/applications/science/math/palp/default.nix new file mode 100644 index 000000000000..3484c369db3b --- /dev/null +++ b/pkgs/applications/science/math/palp/default.nix @@ -0,0 +1,67 @@ +{ stdenv +, fetchurl +, dimensions ? 6 # works for <= dimensions dimensions, but is only optimized for that exact value +, doSymlink ? true # symlink the executables to the default location (without dimension postfix) +}: + +stdenv.mkDerivation rec { + version = "2.1"; + dim = toString dimensions; + name = "palp-${dim}d-${version}"; + + src = fetchurl { + url = "http://hep.itp.tuwien.ac.at/~kreuzer/CY/palp/palp-${version}.tar.gz"; + sha256 = "1s7s2lc5f0ig1yy7ygsh3sddm3sbq4mxwybqsj8lp9wjdxs7qfrs"; + }; + + hardeningDisable = [ "format" ]; + + preBuild = '' + echo Building PALP optimized for ${dim} dimensions + sed -i "s/^#define[^a-zA-Z]*POLY_Dmax.*/#define POLY_Dmax ${dim}/" Global.h + ''; + + installPhase = '' + mkdir -p "$out/bin" + for file in poly class cws nef mori; do + cp -p $file.x "$out/bin/$file-${dim}d.x" + done + '' + stdenv.lib.optionalString doSymlink '' + cd "$out/bin" + for file in poly class cws nef mori; do + ln -sf $file-6d.x $file.x + done + ''; + + meta = with stdenv.lib; { + description = "A Package for Analyzing Lattice Polytopes"; + longDescription = '' + A Package for Analyzing Lattice Polytopes (PALP) is a set of C + programs for calculations with lattice polytopes and applications to + toric geometry. + + It contains routines for vertex and facet enumeration, computation of + incidences and symmetries, as well as completion of the set of lattice + points in the convex hull of a given set of points. In addition, there + are procedures specialised to reflexive polytopes such as the + enumeration of reflexive subpolytopes, and applications to toric + geometry and string theory, like the computation of Hodge data and + fibration structures for toric Calabi-Yau varieties. The package is + well tested and optimised in speed as it was used for time consuming + tasks such as the classification of reflexive polyhedra in 4 + dimensions and the creation and manipulation of very large lists of + 5-dimensional polyhedra. + + While originally intended for low-dimensional applications, the + algorithms work in any dimension and our key routine for vertex and + facet enumeration compares well with existing packages. + ''; + homepage = http://hep.itp.tuwien.ac.at/~kreuzer/CY/CYpalp.html; + # Just a link on the website pointing to gpl -- now gplv3. When the last + # version was released that pointed to gplv2 however, so thats probably + # the right license. + license = licenses.gpl2; + maintainers = with maintainers; [ timokau ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/applications/science/math/pari/default.nix b/pkgs/applications/science/math/pari/default.nix index a1ddbd9ab17d..8c24881f2152 100644 --- a/pkgs/applications/science/math/pari/default.nix +++ b/pkgs/applications/science/math/pari/default.nix @@ -1,5 +1,9 @@ { stdenv, fetchurl -, gmp, readline, libX11, libpthreadstubs, tex, perl }: +, gmp, readline, libX11, tex, perl +, withThread ? true, libpthreadstubs +}: + +assert withThread -> libpthreadstubs != null; stdenv.mkDerivation rec { @@ -11,14 +15,22 @@ stdenv.mkDerivation rec { sha256 = "0ir6m3a8r46md5x6zk4xf159qra7aqparby9zk03k81hjrrxr72g"; }; - buildInputs = [ gmp readline libX11 libpthreadstubs tex perl ]; + buildInputs = [ + gmp + readline + libX11 + tex + perl + ] ++ stdenv.lib.optionals withThread [ + libpthreadstubs + ]; configureScript = "./Configure"; configureFlags = [ - "--mt=pthread" "--with-gmp=${gmp.dev}" "--with-readline=${readline.dev}" - ] ++ stdenv.lib.optional stdenv.isDarwin "--host=x86_64-darwin"; + ] ++ stdenv.lib.optional stdenv.isDarwin "--host=x86_64-darwin" + ++ stdenv.lib.optional withThread "--mt=pthread"; preConfigure = '' export LD=$CC diff --git a/pkgs/applications/science/math/pari/unstable.nix b/pkgs/applications/science/math/pari/unstable.nix deleted file mode 100644 index 65dd3005b4ab..000000000000 --- a/pkgs/applications/science/math/pari/unstable.nix +++ /dev/null @@ -1,31 +0,0 @@ -{ stdenv, fetchurl, gmp, readline, perl }: - -stdenv.mkDerivation rec { - version = "2.9.3"; - name = "pari-unstable-${version}"; - - src = fetchurl { - url = "http://pari.math.u-bordeaux.fr/pub/pari/unstable/pari-${version}.tar.gz"; - sha256 = "0qqal1lpggd6dvs19svnz0dil86xk0xkcj5s3b7104ibkmvjfsp7"; - }; - - buildInputs = [gmp readline]; - nativeBuildInputs = [perl]; - - configureScript = "./Configure"; - configureFlags = - "--with-gmp=${gmp.dev} " + - "--with-readline=${readline.dev}"; - - meta = with stdenv.lib; { - description = "Computer algebra system for high-performance number theory computations"; - homepage = "http://pari.math.u-bordeaux.fr/"; - license = licenses.gpl2Plus; - maintainers = with maintainers; [ ertes raskin ]; - platforms = platforms.linux; - - inherit version; - downloadPage = "http://pari.math.u-bordeaux.fr/download.html"; - updateWalker = true; - }; -} diff --git a/pkgs/applications/science/math/pynac/default.nix b/pkgs/applications/science/math/pynac/default.nix new file mode 100644 index 000000000000..fd566abd9a9a --- /dev/null +++ b/pkgs/applications/science/math/pynac/default.nix @@ -0,0 +1,47 @@ +{ stdenv +, fetchFromGitHub +, autoreconfHook +, pkgconfig +, flint +, gmp +, python2 +, singular +}: + +stdenv.mkDerivation rec { + version = "0.7.19"; + name = "pynac-${version}"; + + src = fetchFromGitHub { + owner = "pynac"; + repo = "pynac"; + rev = "pynac-${version}"; + sha256 = "132bibvapm245c5xy29j3xmjs0pawvw7lv05374m8vv1m39127d3"; + }; + + buildInputs = [ + flint + gmp + singular + singular + python2 + ]; + + nativeBuildInputs = [ + autoreconfHook + pkgconfig + ]; + + meta = with stdenv.lib; { + description = "Python is Not a CAS -- modified version of Ginac"; + longDescription = '' + Pynac -- "Python is Not a CAS" is a modified version of Ginac that + replaces the depency of GiNaC on CLN by a dependency instead of Python. + It is a lite version of GiNaC as well, not implementing all the features + of the full GiNaC, and it is *only* meant to be used as a Python library. + ''; + homepage = http://pynac.org; + maintainers = with maintainers; [ timokau ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/science/math/singular/default.nix b/pkgs/applications/science/math/singular/default.nix index 882d481a7f98..cec1a831c912 100644 --- a/pkgs/applications/science/math/singular/default.nix +++ b/pkgs/applications/science/math/singular/default.nix @@ -1,5 +1,6 @@ { stdenv, fetchurl, gmp, bison, perl, autoconf, ncurses, readline, coreutils, pkgconfig , autoreconfHook +, file , flint , ntl , cddlib @@ -18,7 +19,9 @@ stdenv.mkDerivation rec { sha256 = "0wvgz7l1b7zkpmim0r3mvv4fp8xnhlbz4c7hc90rn30snlansnf1"; }; - configureFlags = stdenv.lib.optionals enableFactory [ + configureFlags = [ + "--with-ntl=${ntl}" + ] ++stdenv.lib.optionals enableFactory [ "--enable-factory" ] ++ stdenv.lib.optionals enableGfanlib [ "--enable-gfanlib" @@ -42,11 +45,19 @@ stdenv.mkDerivation rec { ] ++ stdenv.lib.optionals enableGfanlib [ cddlib ]; - nativeBuildInputs = [ autoconf bison perl pkgconfig autoreconfHook ]; + nativeBuildInputs = [ + bison + perl + pkgconfig + autoreconfHook + ]; - preConfigure = '' - find . -type f -exec sed -e 's@/bin/rm@${coreutils}&@g' -i '{}' ';' - find . -type f -exec sed -e 's@/bin/uname@${coreutils}&@g' -i '{}' ';' + preAutoreconf = '' + find . -type f -readable -writable -exec sed \ + -e 's@/bin/rm@${coreutils}&@g' \ + -e 's@/bin/uname@${coreutils}&@g' \ + -e 's@/usr/bin/file@${file}/bin/file@g' \ + -i '{}' ';' ''; hardeningDisable = stdenv.lib.optional stdenv.isi686 "stackprotector"; diff --git a/pkgs/applications/science/misc/cytoscape/default.nix b/pkgs/applications/science/misc/cytoscape/default.nix index 0194ee0b83c0..36c7884d108b 100644 --- a/pkgs/applications/science/misc/cytoscape/default.nix +++ b/pkgs/applications/science/misc/cytoscape/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "cytoscape-${version}"; - version = "3.6.0"; + version = "3.6.1"; src = fetchurl { url = "http://chianti.ucsd.edu/${name}/${name}.tar.gz"; - sha256 = "13q8caksbzi6j7xy8v5f0pi6766yfawys6jcm50ng78mnhrv2v97"; + sha256 = "1pkdilv1nw6vvdxk71bwjngr8yafrsqwaqvlakhp8yb342r1jd4s"; }; buildInputs = [jre makeWrapper]; diff --git a/pkgs/applications/science/misc/motu-client/default.nix b/pkgs/applications/science/misc/motu-client/default.nix index 0d5c79fde900..0994bb1ca38d 100644 --- a/pkgs/applications/science/misc/motu-client/default.nix +++ b/pkgs/applications/science/misc/motu-client/default.nix @@ -1,11 +1,11 @@ { python27Packages, fetchurl, lib } : python27Packages.buildPythonApplication rec { - name = "motu-client-${version}"; - version = "1.4.00"; + pname = "motu-client"; + version = "1.5.00"; src = fetchurl { url = "https://github.com/quiet-oceans/motuclient-setuptools/archive/${version}.tar.gz"; - sha256 = "0v0h90mylhaamd1vm4nc64q63vmlafhijm47hs0xfam33y1q2yvb"; + sha256 = "1iqsws3wa2gpb36ms21xmaxfi83i8p8cdya4cxpn4r47c8mz74x8"; }; meta = with lib; { diff --git a/pkgs/applications/science/misc/openmvg/default.nix b/pkgs/applications/science/misc/openmvg/default.nix index fb3b0a29724b..b139f30b3d18 100644 --- a/pkgs/applications/science/misc/openmvg/default.nix +++ b/pkgs/applications/science/misc/openmvg/default.nix @@ -46,5 +46,6 @@ stdenv.mkDerivation rec { license = stdenv.lib.licenses.mpl20; platforms = stdenv.lib.platforms.linux; maintainers = with stdenv.lib.maintainers; [ mdaiter ]; + broken = true; # 2018-04-11 }; } diff --git a/pkgs/applications/science/molecular-dynamics/gromacs/default.nix b/pkgs/applications/science/molecular-dynamics/gromacs/default.nix index 351bcccd45d8..ae21af65584c 100644 --- a/pkgs/applications/science/molecular-dynamics/gromacs/default.nix +++ b/pkgs/applications/science/molecular-dynamics/gromacs/default.nix @@ -8,11 +8,11 @@ stdenv.mkDerivation { - name = "gromacs-4.6.7"; + name = "gromacs-2018"; src = fetchurl { - url = "ftp://ftp.gromacs.org/pub/gromacs/gromacs-4.6.7.tar.gz"; - sha256 = "6afb1837e363192043de34b188ca3cf83db6bd189601f2001a1fc5b0b2a214d9"; + url = "ftp://ftp.gromacs.org/pub/gromacs/gromacs-2018.tar.gz"; + sha256 = "1sfh3wdrw07797xm86fq10r0024ym585yyrnhdh0qam596vx1dfy"; }; buildInputs = [cmake fftw] diff --git a/pkgs/applications/search/grepcidr/default.nix b/pkgs/applications/search/grepcidr/default.nix new file mode 100644 index 000000000000..69fc0e76932c --- /dev/null +++ b/pkgs/applications/search/grepcidr/default.nix @@ -0,0 +1,21 @@ +{ stdenv, fetchurl }: + +stdenv.mkDerivation rec { + name = "grepcidr-${version}"; + version = "2.0"; + + src = fetchurl { + url = "http://www.pc-tools.net/files/unix/${name}.tar.gz"; + sha256 = "1yzpa1nigmmp4hir6377hrkpp0z6jnxgccaw2jbqgydbglvnm231"; + }; + + installFlags = [ "PREFIX=$(out)" ]; + + meta = with stdenv.lib; { + description = "Filter IPv4 and IPv6 addresses matching CIDR patterns"; + homepage = http://www.pc-tools.net/unix/grepcidr/; + license = licenses.gpl3; + platforms = platforms.unix; + maintainers = [ maintainers.fadenb ]; + }; +} diff --git a/pkgs/applications/version-management/bazaar/default.nix b/pkgs/applications/version-management/bazaar/default.nix index 47d667a0c067..72e010fd283c 100644 --- a/pkgs/applications/version-management/bazaar/default.nix +++ b/pkgs/applications/version-management/bazaar/default.nix @@ -1,4 +1,5 @@ { stdenv, fetchurl, python2Packages +, fetchpatch , withSFTP ? true }: @@ -17,8 +18,15 @@ python2Packages.buildPythonApplication rec { propagatedBuildInputs = [] ++ stdenv.lib.optionals withSFTP [ python2Packages.paramiko ]; - # Bazaar can't find the certificates alone - patches = [ ./add_certificates.patch ]; + patches = [ + # Bazaar can't find the certificates alone + ./add_certificates.patch + (fetchpatch { + url = "https://bazaar.launchpad.net/~brz/brz/trunk/revision/6754"; + sha256 = "0mdqa9w1p6cmli6976v4wi0sw9r4p5prkj7lzfd1877wk11c9c73"; + name = "CVE-2017-14176.patch"; + }) + ]; postPatch = '' substituteInPlace bzrlib/transport/http/_urllib2_wrappers.py \ --subst-var-by certPath /etc/ssl/certs/ca-certificates.crt diff --git a/pkgs/applications/version-management/git-and-tools/default.nix b/pkgs/applications/version-management/git-and-tools/default.nix index cd969ff81d0b..73659a32f4bf 100644 --- a/pkgs/applications/version-management/git-and-tools/default.nix +++ b/pkgs/applications/version-management/git-and-tools/default.nix @@ -15,7 +15,6 @@ let perlPackages.MIMEBase64 perlPackages.AuthenSASL perlPackages.DigestHMAC ]; - gitwebPerlLibs = with perlPackages; [ CGI HTMLParser CGIFast FCGI FCGIProcManager HTMLTagCloud ]; }; in diff --git a/pkgs/applications/version-management/git-and-tools/git/default.nix b/pkgs/applications/version-management/git-and-tools/git/default.nix index b336f72c7ac1..74e88430239d 100644 --- a/pkgs/applications/version-management/git-and-tools/git/default.nix +++ b/pkgs/applications/version-management/git-and-tools/git/default.nix @@ -1,9 +1,11 @@ -{ fetchurl, stdenv, curl, openssl, zlib, expat, perl, python, gettext, cpio +{ fetchurl, stdenv, buildPackages +, curl, openssl, zlib, expat, perl, python, gettext, cpio , gnugrep, gnused, gawk, coreutils # needed at runtime by git-filter-branch etc -, gzip, openssh, pcre2 +, openssh, pcre2 , asciidoc, texinfo, xmlto, docbook2x, docbook_xsl, docbook_xml_dtd_45 , libxslt, tcl, tk, makeWrapper, libiconv -, svnSupport, subversionClient, perlLibs, smtpPerlLibs, gitwebPerlLibs +, svnSupport, subversionClient, perlLibs, smtpPerlLibs +, perlSupport ? true , guiSupport , withManual ? true , pythonSupport ? true @@ -12,9 +14,12 @@ , darwin }: +assert sendEmailSupport -> perlSupport; +assert svnSupport -> perlSupport; + let version = "2.16.3"; - svn = subversionClient.override { perlBindings = true; }; + svn = subversionClient.override { perlBindings = perlSupport; }; in stdenv.mkDerivation { @@ -25,6 +30,8 @@ stdenv.mkDerivation { sha256 = "0j1dwvg5llnj3g0fp8hdgpms4hp90qw9f6509vqw30dhwplrjpfn"; }; + outputs = [ "out" ] ++ stdenv.lib.optional perlSupport "gitweb"; + hardeningDisable = [ "format" ]; patches = [ @@ -42,9 +49,11 @@ stdenv.mkDerivation { done ''; - buildInputs = [curl openssl zlib expat gettext cpio makeWrapper libiconv perl] + nativeBuildInputs = [ gettext perl ] ++ stdenv.lib.optionals withManual [ asciidoc texinfo xmlto docbook2x - docbook_xsl docbook_xml_dtd_45 libxslt ] + docbook_xsl docbook_xml_dtd_45 libxslt ]; + buildInputs = [curl openssl zlib expat cpio makeWrapper libiconv] + ++ stdenv.lib.optionals perlSupport [ perl ] ++ stdenv.lib.optionals guiSupport [tcl tk] ++ stdenv.lib.optionals withpcre2 [ pcre2 ] ++ stdenv.lib.optionals stdenv.isDarwin [ darwin.Security ]; @@ -54,11 +63,21 @@ stdenv.mkDerivation { NIX_LDFLAGS = stdenv.lib.optionalString (!stdenv.cc.isClang) "-lgcc_s" + stdenv.lib.optionalString (stdenv.isFreeBSD) "-lthr"; - makeFlags = "prefix=\${out} PERL_PATH=${perl}/bin/perl SHELL_PATH=${stdenv.shell} " - + (if pythonSupport then "PYTHON_PATH=${python}/bin/python" else "NO_PYTHON=1") - + (if stdenv.isSunOS then " INSTALL=install NO_INET_NTOP= NO_INET_PTON=" else "") - + (if stdenv.isDarwin then " NO_APPLE_COMMON_CRYPTO=1" else " sysconfdir=/etc/ ") - + (if stdenv.hostPlatform.isMusl then "NO_SYS_POLL_H=1 NO_GETTEXT=YesPlease" else ""); + configureFlags = stdenv.lib.optionals (stdenv.buildPlatform != stdenv.hostPlatform) [ + "ac_cv_fread_reads_directories=yes" + "ac_cv_snprintf_returns_bogus=no" + ]; + + makeFlags = [ + "prefix=\${out}" + "SHELL_PATH=${stdenv.shell}" + ] + ++ (if perlSupport then ["PERL_PATH=${perl}/bin/perl"] else ["NO_PERL=1"]) + ++ (if pythonSupport then ["PYTHON_PATH=${python}/bin/python"] else ["NO_PYTHON=1"]) + ++ stdenv.lib.optionals stdenv.isSunOS ["INSTALL=install" "NO_INET_NTOP=" "NO_INET_PTON="] + ++ (if stdenv.isDarwin then ["NO_APPLE_COMMON_CRYPTO=1"] else ["sysconfdir=/etc/"]) + ++ stdenv.lib.optionals stdenv.hostPlatform.isMusl ["NO_SYS_POLL_H=1" "NO_GETTEXT=YesPlease"] + ++ stdenv.lib.optional withpcre2 "USE_LIBPCRE2=1"; # build git-credential-osxkeychain if darwin postBuild = stdenv.lib.optionalString stdenv.isDarwin '' @@ -71,9 +90,7 @@ stdenv.mkDerivation { # so that `SPARSE_FLAGS' corresponds to the current architecture... #doCheck = true; - installFlags = "NO_INSTALL_HARDLINKS=1" - + (if withpcre2 then " USE_LIBPCRE2=1" else ""); - + installFlags = "NO_INSTALL_HARDLINKS=1"; preInstall = stdenv.lib.optionalString stdenv.isDarwin '' mkdir -p $out/bin @@ -113,9 +130,10 @@ stdenv.mkDerivation { SCRIPT="$(cat <<'EOS' BEGIN{ @a=( - '${perl}/bin/perl', '${gnugrep}/bin/grep', '${gnused}/bin/sed', '${gawk}/bin/awk', + '${gnugrep}/bin/grep', '${gnused}/bin/sed', '${gawk}/bin/awk', '${coreutils}/bin/cut', '${coreutils}/bin/basename', '${coreutils}/bin/dirname', '${coreutils}/bin/wc', '${coreutils}/bin/tr' + ${stdenv.lib.optionalString perlSupport ", '${perl}/bin/perl'"} ); } foreach $c (@a) { @@ -131,19 +149,12 @@ stdenv.mkDerivation { substituteInPlace $out/libexec/git-core/git-sh-i18n \ --subst-var-by gettext ${gettext} - # gzip (and optionally bzip2, xz, zip) are runtime dependencies for - # gitweb.cgi, need to patch so that it's found - sed -i -e "s|'compressor' => \['gzip'|'compressor' => ['${gzip}/bin/gzip'|" \ - $out/share/gitweb/gitweb.cgi - # Give access to CGI.pm and friends (was removed from perl core in 5.22) - for p in ${stdenv.lib.concatStringsSep " " gitwebPerlLibs}; do - sed -i -e "/use CGI /i use lib \"$p/lib/perl5/site_perl\";" \ - "$out/share/gitweb/gitweb.cgi" - done - # Also put git-http-backend into $PATH, so that we can use smart # HTTP(s) transports for pushing ln -s $out/libexec/git-core/git-http-backend $out/bin/git-http-backend + '' + stdenv.lib.optionalString perlSupport '' + # put in separate package for simpler maintenance + mv $out/share/gitweb $gitweb/ # wrap perl commands gitperllib=$out/lib/perl5/site_perl @@ -189,7 +200,7 @@ stdenv.mkDerivation { '') + stdenv.lib.optionalString withManual ''# Install man pages and Info manual - make -j $NIX_BUILD_CORES -l $NIX_BUILD_CORES PERL_PATH="${perl}/bin/perl" cmd-list.made install install-info \ + make -j $NIX_BUILD_CORES -l $NIX_BUILD_CORES PERL_PATH="${buildPackages.perl}/bin/perl" cmd-list.made install install-info \ -C Documentation '' + (if guiSupport then '' diff --git a/pkgs/applications/version-management/git-and-tools/gitweb/default.nix b/pkgs/applications/version-management/git-and-tools/gitweb/default.nix new file mode 100644 index 000000000000..0358f850c9ab --- /dev/null +++ b/pkgs/applications/version-management/git-and-tools/gitweb/default.nix @@ -0,0 +1,37 @@ +{ stdenv, git, gzip, perlPackages, fetchFromGitHub +, gitwebTheme ? false }: + +let + gitwebPerlLibs = with perlPackages; [ CGI HTMLParser CGIFast FCGI FCGIProcManager HTMLTagCloud ]; + gitwebThemeSrc = fetchFromGitHub { + owner = "kogakure"; + repo = "gitweb-theme"; + rev = "049b88e664a359f8ec25dc6f531b7e2aa60dd1a2"; + sha256 = "0wksqma41z36dbv6w6iplkjfdm0ha3njp222fakyh4lismajr71p"; + }; +in stdenv.mkDerivation { + name = "gitweb"; + + src = git.gitweb; + + installPhase = '' + mkdir $out + mv * $out + + # gzip (and optionally bzip2, xz, zip) are runtime dependencies for + # gitweb.cgi, need to patch so that it's found + sed -i -e "s|'compressor' => \['gzip'|'compressor' => ['${gzip}/bin/gzip'|" \ + $out/gitweb.cgi + # Give access to CGI.pm and friends (was removed from perl core in 5.22) + for p in ${stdenv.lib.concatStringsSep " " gitwebPerlLibs}; do + sed -i -e "/use CGI /i use lib \"$p/lib/perl5/site_perl\";" \ + "$out/gitweb.cgi" + done + + ${stdenv.lib.optionalString gitwebTheme "cp ${gitwebThemeSrc}/* $out/static"} + ''; + + meta = git.meta // { + maintainers = with stdenv.lib.maintainers; [ gnidorah ]; + }; +} diff --git a/pkgs/applications/version-management/gitea/default.nix b/pkgs/applications/version-management/gitea/default.nix index 8fcc3e7e9270..da9ee9b40811 100644 --- a/pkgs/applications/version-management/gitea/default.nix +++ b/pkgs/applications/version-management/gitea/default.nix @@ -7,13 +7,13 @@ with stdenv.lib; buildGoPackage rec { name = "gitea-${version}"; - version = "1.3.3"; + version = "1.4.0"; src = fetchFromGitHub { owner = "go-gitea"; repo = "gitea"; rev = "v${version}"; - sha256 = "0ikkpvarp6mzsqk56ihw72fbv7r98g5v5i83rxq8dk709fdqplm6"; + sha256 = "07fbcd134n7giwxpqli5hfywmi0vb8awgdh3gyiwyzhjwwzfrxkq"; }; patches = [ ./static-root-path.patch ]; diff --git a/pkgs/applications/version-management/sit/default.nix b/pkgs/applications/version-management/sit/default.nix index eae72739ec2b..84211543c3b3 100644 --- a/pkgs/applications/version-management/sit/default.nix +++ b/pkgs/applications/version-management/sit/default.nix @@ -2,19 +2,19 @@ rustPlatform.buildRustPackage rec { name = "sit-${version}"; - version = "0.2.1"; + version = "0.3.0"; src = fetchFromGitHub { owner = "sit-it"; repo = "sit"; rev = "v${version}"; - sha256 = "1gcw5fqaqpxl2xgry0w8750g2msrk884zj1slym6r3nj7s2m9j22"; + sha256 = "1si4fg02wxi35hpkr58na06h19yjw6qd9c5mbb9xfkkzgz5mnssj"; }; - cargoSha256 = "0hb82j97m8vw8m6gpb6s3bbi31xxv9nqh3aq7hkbmp1pqc02sg3q"; + cargoSha256 = "083p7z7blj064840ddgnxvqjmih4bmy92clds3qgv5v7lh63wfmn"; meta = with stdenv.lib; { - description = "SCM-agnostic, file-based, offline-first, immutable issue tracker"; + description = "Serverless Information Tracker"; homepage = http://sit-it.org/; license = with licenses; [ asl20 /* or */ mit ]; maintainers = with maintainers; [ dywedir ]; diff --git a/pkgs/applications/video/avidemux/default.nix b/pkgs/applications/video/avidemux/default.nix index 99ed7378745c..991842ba0dc1 100644 --- a/pkgs/applications/video/avidemux/default.nix +++ b/pkgs/applications/video/avidemux/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchurl, cmake, pkgconfig, lndir +{ stdenv, lib, fetchurl, fetchpatch, cmake, pkgconfig, lndir , zlib, gettext, libvdpau, libva, libXv, sqlite , yasm, freetype, fontconfig, fribidi , makeWrapper, libXext, libGLU, qttools, qtbase @@ -32,7 +32,15 @@ stdenv.mkDerivation rec { sha256 = "1bf4l9qwxq3smc1mx5pybydc742a4qqsk17z50j9550d9iwnn7gy"; }; - patches = [ ./dynamic_install_dir.patch ./bootstrap_logging.patch ]; + patches = [ + ./dynamic_install_dir.patch + ./bootstrap_logging.patch + # glibc 2.27 compat + (fetchpatch { + url = https://github.com/mean00/avidemux2/commit/afdd9c4b876d77a4974d3fa7d9f25caeffbdf13d.patch; + sha256 = "0mf8vpfdqybziqsfyvxwcdm3zsmnp64293icinhvfpq9xp5b6vn6"; + }) + ]; nativeBuildInputs = [ yasm cmake pkgconfig ]; buildInputs = [ diff --git a/pkgs/applications/video/avxsynth/default.nix b/pkgs/applications/video/avxsynth/default.nix index 06dcaf31b443..3a595da96d07 100644 --- a/pkgs/applications/video/avxsynth/default.nix +++ b/pkgs/applications/video/avxsynth/default.nix @@ -38,5 +38,6 @@ stdenv.mkDerivation rec { license = licenses.gpl2Plus; maintainers = with maintainers; [ codyopel viric ]; platforms = platforms.linux; + broken = true; # 2018-04-10 }; } diff --git a/pkgs/applications/video/dvb-apps/default.nix b/pkgs/applications/video/dvb-apps/default.nix index 8ceb7875be4d..1e671b4ea7bf 100644 --- a/pkgs/applications/video/dvb-apps/default.nix +++ b/pkgs/applications/video/dvb-apps/default.nix @@ -19,5 +19,6 @@ stdenv.mkDerivation { homepage = https://linuxtv.org/; platforms = stdenv.lib.platforms.linux; license = stdenv.lib.licenses.gpl2; + broken = true; # 2018-04-10 }; } diff --git a/pkgs/applications/video/handbrake/default.nix b/pkgs/applications/video/handbrake/default.nix index 1c97f9531f79..6ce2ae08eeb4 100644 --- a/pkgs/applications/video/handbrake/default.nix +++ b/pkgs/applications/video/handbrake/default.nix @@ -14,12 +14,14 @@ autoconf, automake, cmake, libtool, m4, jansson, libass, libiconv, libsamplerate, fribidi, libxml2, bzip2, libogg, libopus, libtheora, libvorbis, libdvdcss, a52dec, - lame, ffmpeg, libdvdread, libdvdnav, libbluray, + lame, libdvdread, libdvdnav, libbluray, mp4v2, mpeg2dec, x264, x265, libmkv, fontconfig, freetype, hicolor-icon-theme, glib, gtk3, intltool, libnotify, gst_all_1, dbus-glib, udev, libgudev, libvpx, - useGtk ? true, wrapGAppsHook ? null, libappindicator-gtk3 ? null, useFdk ? false, fdk_aac ? null + useGtk ? true, wrapGAppsHook ? null, libappindicator-gtk3 ? null, + useFfmpeg ? false, libav_12 ? null, ffmpeg ? null, + useFdk ? false, fdk_aac ? null }: stdenv.mkDerivation rec { @@ -35,20 +37,19 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake python2 pkgconfig yasm autoconf automake libtool m4 - ] ++ (lib.optionals useGtk [ - intltool wrapGAppsHook - ]); + ] ++ lib.optionals useGtk [ intltool wrapGAppsHook ]; buildInputs = [ fribidi fontconfig freetype jansson zlib libass libiconv libsamplerate libxml2 bzip2 libogg libopus libtheora libvorbis libdvdcss a52dec libmkv - lame ffmpeg libdvdread libdvdnav libbluray mp4v2 mpeg2dec x264 x265 libvpx - ] ++ (lib.optionals useGtk [ + lame libdvdread libdvdnav libbluray mp4v2 mpeg2dec x264 x265 libvpx + ] ++ lib.optionals useGtk [ glib gtk3 libappindicator-gtk3 libnotify gst_all_1.gstreamer gst_all_1.gst-plugins-base dbus-glib udev libgudev - ]) ++ (lib.optionals useFdk [fdk_aac]); + ] ++ (if useFfmpeg then [ ffmpeg ] else [ libav_12 ]) + ++ lib.optional useFdk fdk_aac; dontUseCmakeConfigure = true; @@ -57,8 +58,6 @@ stdenv.mkDerivation rec { preConfigure = '' patchShebangs scripts - echo 'TAG=${version}' > version.txt - # `configure` errors out when trying to read the current year which is too low substituteInPlace make/configure.py \ --replace developer release \ @@ -94,13 +93,17 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { homepage = http://handbrake.fr/; - description = "A tool for ripping DVDs into video files"; + description = "A tool for converting video files and ripping DVDs"; longDescription = '' - Handbrake is a versatile transcoding DVD ripper. This package - provides the cli HandbrakeCLI and the GTK+ version ghb. + Tool for converting and remuxing video files + into selection of modern and widely supported codecs + and containers. Very versatile and customizable. + Package provides: + CLI - `HandbrakeCLI` + GTK+ GUI - `ghb` ''; license = licenses.gpl2; - maintainers = with maintainers; [ wmertens ]; + maintainers = with maintainers; [ Anton-Latukha wmertens ]; # Not tested on anything else platforms = platforms.linux; }; diff --git a/pkgs/applications/video/kazam/bug_1190693.patch b/pkgs/applications/video/kazam/bug_1190693.patch deleted file mode 100644 index 9f00c6b60791..000000000000 --- a/pkgs/applications/video/kazam/bug_1190693.patch +++ /dev/null @@ -1,14 +0,0 @@ -=== modified file 'kazam/frontend/indicator.py' ---- a/kazam/frontend/indicator.py 2013-01-26 01:53:53 +0000 -+++ b/kazam/frontend/indicator.py 2013-06-13 18:18:37 +0000 -@@ -291,3 +291,9 @@ - def start_recording(self): - logger.debug("Recording started.") - self.indicator.set_from_icon_name("kazam-recording") -+ -+ def hide_it(self): -+ self.indicator.set_visible(False) -+ -+ def show_it(self): -+ self.indicator.set_visible(True) - diff --git a/pkgs/applications/video/kazam/datadir.patch b/pkgs/applications/video/kazam/datadir.patch deleted file mode 100644 index 114d4228be2d..000000000000 --- a/pkgs/applications/video/kazam/datadir.patch +++ /dev/null @@ -1,11 +0,0 @@ ---- a/bin/kazam 2014-02-03 23:11:38.465614061 +0100 -+++ b/bin/kazam-1 2014-02-03 23:12:28.447058700 +0100 -@@ -68,7 +68,7 @@ - # when base install path is not /usr - curpath = os.path.abspath(__file__) - curpath = os.path.realpath(curpath) -- datadir = curpath.split('bin/')[0] + "share/kazam/" -+ datadir = os.path.realpath(os.path.join(curpath, "./../../", "share/kazam/")) - - try: - import platform diff --git a/pkgs/applications/video/kazam/default.nix b/pkgs/applications/video/kazam/default.nix index b67c4a43cf56..9ffd62d068ae 100644 --- a/pkgs/applications/video/kazam/default.nix +++ b/pkgs/applications/video/kazam/default.nix @@ -1,46 +1,41 @@ -{ stdenv, fetchurl, python3Packages, gst_all_1, makeWrapper, gobjectIntrospection -, gtk3, libwnck3, keybinder, intltool, libcanberra-gtk2 }: +{ stdenv, fetchurl, substituteAll, python3, gst_all_1, wrapGAppsHook, gobjectIntrospection +, gtk3, libwnck3, keybinder3, intltool, libcanberra-gtk3, libappindicator-gtk3, libpulseaudio }: - -python3Packages.buildPythonApplication rec { +python3.pkgs.buildPythonApplication rec { name = "kazam-${version}"; - version = "1.4.3"; + version = "1.4.5"; namePrefix = ""; src = fetchurl { url = "https://launchpad.net/kazam/stable/${version}/+download/kazam-${version}.tar.gz"; - sha256 = "00bcn0yj9xrv87sf6xd3wpilsjgjpsj15zzpjh351ffpjnr0ica8"; + sha256 = "1qygnrvm6aqixbyivhssp70hs0llxwk7lh3j7idxa2jbkk06hj4f"; }; - # TODO: keybinder, appindicator3 - buildInputs = with python3Packages; - [ pygobject3 pyxdg pycairo gst_all_1.gstreamer gst_all_1.gst-plugins-base - gst_all_1.gst-plugins-good gobjectIntrospection gtk3 libwnck3 distutils_extra - intltool dbus-python ]; - - # TODO: figure out why PYTHONPATH is not passed automatically for those programs - pythonPath = with python3Packages; - [ pygobject3 pyxdg pycairo dbus-python ]; - - patches = [ ./datadir.patch ./bug_1190693.patch ]; - prePatch = '' - rm setup.cfg - substituteInPlace kazam/backend/grabber.py --replace "/usr/bin/canberra-gtk-play" "${libcanberra-gtk2}/bin/canberra-gtk-play" - ''; + nativeBuildInputs = [ gobjectIntrospection python3.pkgs.distutils_extra intltool wrapGAppsHook ]; + buildInputs = [ + gst_all_1.gstreamer gst_all_1.gst-plugins-base gst_all_1.gst-plugins-good gtk3 libwnck3 + keybinder3 libappindicator-gtk3 + ]; + + propagatedBuildInputs = with python3.pkgs; [ pygobject3 pyxdg pycairo dbus-python ]; + + patches = [ + # Fix paths + (substituteAll { + src = ./fix-paths.patch; + libcanberra = libcanberra-gtk3; + inherit libpulseaudio; + }) + # Fix compability with Python 3.4 + (fetchurl { + url = https://sources.debian.org/data/main/k/kazam/1.4.5-2/debian/patches/configparser_api_changes.patch; + sha256 = "0yvmipnh98s7y07cp1f113l0qqfw65k13an96byq707z3ymv1c2h"; + }) + ]; # no tests doCheck = false; - preFixup = '' - wrapProgram $out/bin/kazam \ - --prefix GI_TYPELIB_PATH : "$GI_TYPELIB_PATH" \ - --prefix LD_LIBRARY_PATH ":" "${stdenv.lib.makeLibraryPath [ gtk3 gst_all_1.gstreamer keybinder ]}" \ - --prefix GST_PLUGIN_SYSTEM_PATH : "$GST_PLUGIN_SYSTEM_PATH" \ - --prefix XDG_DATA_DIRS : "${gtk3.out}/share" \ - --set GST_REGISTRY "/tmp/kazam.gstreamer.registry"; - ''; - - meta = with stdenv.lib; { description = "A screencasting program created with design in mind"; homepage = https://code.launchpad.net/kazam; diff --git a/pkgs/applications/video/kazam/fix-paths.patch b/pkgs/applications/video/kazam/fix-paths.patch new file mode 100644 index 000000000000..43e360830ab5 --- /dev/null +++ b/pkgs/applications/video/kazam/fix-paths.patch @@ -0,0 +1,22 @@ +--- a/kazam/backend/grabber.py ++++ b/kazam/backend/grabber.py +@@ -72,7 +72,7 @@ + # + if prefs.shutter_sound and (not self.god): + soundfile = os.path.join(prefs.datadir, 'sounds', prefs.sound_files[prefs.shutter_type]) +- subprocess.call(['/usr/bin/canberra-gtk-play', '-f', soundfile]) ++ subprocess.call(['@libcanberra@/bin/canberra-gtk-play', '-f', soundfile]) + + if self.xid: + if prefs.capture_borders_pic: +--- a/kazam/pulseaudio/ctypes_pulseaudio.py ++++ b/kazam/pulseaudio/ctypes_pulseaudio.py +@@ -20,7 +20,7 @@ + # MA 02110-1301, USA. + + from ctypes import * +-PA = CDLL('libpulse.so.0') ++PA = CDLL('@libpulseaudio@/lib/libpulse.so.0') + + # + # Pulse Audio constants and defines diff --git a/pkgs/applications/video/peek/default.nix b/pkgs/applications/video/peek/default.nix index 6a84154818b0..728f6387ffa9 100644 --- a/pkgs/applications/video/peek/default.nix +++ b/pkgs/applications/video/peek/default.nix @@ -1,18 +1,22 @@ { stdenv, fetchFromGitHub, cmake, gettext, libxml2, pkgconfig, txt2man, vala, wrapGAppsHook -, gsettings-desktop-schemas, gtk3, keybinder3 +, gsettings-desktop-schemas, gtk3, keybinder3, ffmpeg }: stdenv.mkDerivation rec { name = "peek-${version}"; - version = "1.3.0"; + version = "1.3.1"; src = fetchFromGitHub { owner = "phw"; repo = "peek"; rev = version; - sha256 = "0yizf55rzkm88bfjzwr8yyhm33yqp1mbih2ifwhvnjd1911db0x9"; + sha256 = "1fnvlklmg6s5rs3ql74isa5fgdkqqrpsyf8k2spxj520239l4vgb"; }; + preConfigure = '' + gappsWrapperArgs+=(--prefix PATH : ${stdenv.lib.makeBinPath [ ffmpeg ]}) + ''; + nativeBuildInputs = [ cmake gettext pkgconfig libxml2.bin txt2man vala wrapGAppsHook ]; buildInputs = [ gsettings-desktop-schemas gtk3 keybinder3 ]; diff --git a/pkgs/applications/video/pitivi/default.nix b/pkgs/applications/video/pitivi/default.nix index 48074a86b552..6c92b9aeed6b 100644 --- a/pkgs/applications/video/pitivi/default.nix +++ b/pkgs/applications/video/pitivi/default.nix @@ -1,61 +1,80 @@ { stdenv, fetchurl, pkgconfig, intltool, itstool, wrapGAppsHook , python3Packages, gst, gtk3, hicolor-icon-theme , gobjectIntrospection, librsvg, gnome3, libnotify -# for gst-transcoder: -, which, meson, ninja +, meson, ninja }: let - version = "0.96"; + version = "0.99"; # gst-transcoder will eventually be merged with gstreamer (according to # gst-transcoder 1.8.0 release notes). For now the only user is pitivi so we # don't bother exposing the package to all of nixpkgs. gst-transcoder = stdenv.mkDerivation rec { - name = "gst-transcoder-1.8.0"; + version = "1.12.2"; + name = "gst-transcoder-${version}"; src = fetchurl { name = "${name}.tar.gz"; - url = "https://github.com/pitivi/gst-transcoder/archive/1.8.0.tar.gz"; - sha256 = "0iggr6idmp7cmfsf6pkhfl3jq1bkga37jl5prbcl1zapkzi26fg6"; + url = "https://github.com/pitivi/gst-transcoder/archive/${version}.tar.gz"; + sha256 = "0cnwmrsd321s02ff91m3j27ydj7f8wks0jvmp5admlhka6z7zxm9"; }; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ which meson ninja gobjectIntrospection ] - ++ (with gst; [ gstreamer gst-plugins-base ]); + nativeBuildInputs = [ pkgconfig meson ninja gobjectIntrospection ]; + buildInputs = with gst; [ gstreamer gst-plugins-base ]; }; -in stdenv.mkDerivation rec { +in python3Packages.buildPythonApplication rec { name = "pitivi-${version}"; src = fetchurl { - url = "mirror://gnome/sources/pitivi/${version}/${name}.tar.xz"; - sha256 = "115d37mvi32yds8gqj2yidkk6pap7szavhjf2hw0388ynydlc2zs"; + url = "mirror://gnome/sources/pitivi/${gnome3.versionBranch version}/${name}.tar.xz"; + sha256 = "0z4gvcr0cvyz2by47f36nqf7x2kfv9wn382w9glhs7l0d7b2zl69"; }; - nativeBuildInputs = [ pkgconfig intltool itstool wrapGAppsHook ]; + format = "other"; + + patches = [ + # By default, the build picks up environment variables like PYTHONPATH + # and saves them to the generated binary. This would make the build-time + # dependencies part of the closure so we remove it. + ./prevent-closure-contamination.patch + ]; + + postPatch = '' + patchShebangs ./getenvvar.py + ''; + + nativeBuildInputs = [ meson ninja pkgconfig intltool itstool wrapGAppsHook ]; buildInputs = [ - gobjectIntrospection gtk3 librsvg gnome3.gnome-desktop + gobjectIntrospection gtk3 librsvg gnome3.gnome-desktop gnome3.gsound gnome3.defaultIconTheme gnome3.gsettings-desktop-schemas libnotify gst-transcoder ] ++ (with gst; [ gstreamer gst-editing-services - gst-plugins-base gst-plugins-good + gst-plugins-base (gst-plugins-good.override { gtkSupport = true; }) gst-plugins-bad gst-plugins-ugly gst-libav gst-validate - ]) ++ (with python3Packages; [ - python pygobject3 gst-python pyxdg numpy pycairo matplotlib - dbus-python ]); + pythonPath = with python3Packages; [ pygobject3 gst-python pyxdg numpy pycairo matplotlib dbus-python ]; + + passthru = { + updateScript = gnome3.updateScript { + packageName = "pitivi"; + versionPolicy = "none"; # we are using dev version, since the stable one is too old + }; + }; + meta = with stdenv.lib; { description = "Non-Linear video editor utilizing the power of GStreamer"; - homepage = "http://pitivi.org/"; + homepage = http://pitivi.org/; longDescription = '' Pitivi is a video editor built upon the GStreamer Editing Services. It aims to be an intuitive and flexible application that can appeal to newbies and professionals alike. ''; - license = licenses.lgpl21Plus; - platforms = platforms.linux; + license = licenses.lgpl21Plus; + maintainers = with maintainers; []; + platforms = platforms.linux; }; } diff --git a/pkgs/applications/video/pitivi/prevent-closure-contamination.patch b/pkgs/applications/video/pitivi/prevent-closure-contamination.patch new file mode 100644 index 000000000000..0025ecd0a4cf --- /dev/null +++ b/pkgs/applications/video/pitivi/prevent-closure-contamination.patch @@ -0,0 +1,23 @@ +--- a/meson.build ++++ b/meson.build +@@ -26,15 +26,15 @@ + geteenvvar = find_program('getenvvar.py') + cdata = configuration_data() + cdata.set('CONFIGURED_PYTHONPATH', +- run_command(geteenvvar, 'PYTHONPATH').stdout().strip()) ++ '') + cdata.set('CONFIGURED_GI_TYPELIB_PATH', +- run_command(geteenvvar, 'GI_TYPELIB_PATH').stdout().strip()) ++ '') + cdata.set('CONFIGURED_LD_LIBRARY_PATH', +- run_command(geteenvvar, 'LD_LIBRARY_PATH').stdout().strip()) ++ '') + cdata.set('CONFIGURED_GST_PLUGIN_PATH', +- run_command(geteenvvar, 'GST_PLUGIN_PATH').stdout().strip()) ++ '') + cdata.set('CONFIGURED_GST_PLUGIN_SYSTEM_PATH', +- run_command(geteenvvar, 'GST_PLUGIN_SYSTEM_PATH').stdout().strip()) ++ '') + cdata.set('LIBDIR', join_paths(get_option('prefix'), get_option('libdir'))) + cdata.set('DATADIR', join_paths(get_option('prefix'), get_option('datadir'))) + cdata.set('PACKAGE_NAME', 'Pitivi') diff --git a/pkgs/applications/video/vlc/default.nix b/pkgs/applications/video/vlc/default.nix index fffbd5c0ffb4..44c4d317d36a 100644 --- a/pkgs/applications/video/vlc/default.nix +++ b/pkgs/applications/video/vlc/default.nix @@ -7,7 +7,6 @@ , libmtp, unzip, taglib, libkate, libtiger, libv4l, samba, liboggz , libass, libva, libdvbpsi, libdc1394, libraw1394, libopus , libvdpau, libsamplerate, live555, fluidsynth -, onlyLibVLC ? false , qt4 ? null , withQt5 ? false, qtbase ? null, qtx11extras ? null , jackSupport ? false @@ -68,8 +67,7 @@ stdenv.mkDerivation rec { "--enable-vdpau" "--enable-dvdnav" "--enable-samplerate" - ] - ++ optional onlyLibVLC "--disable-vlc"; + ]; enableParallelBuilding = true; diff --git a/pkgs/applications/virtualization/docker-distribution/default.nix b/pkgs/applications/virtualization/docker/distribution.nix index 0af9abc852ef..0af9abc852ef 100644 --- a/pkgs/applications/virtualization/docker-distribution/default.nix +++ b/pkgs/applications/virtualization/docker/distribution.nix diff --git a/pkgs/applications/virtualization/qemu/default.nix b/pkgs/applications/virtualization/qemu/default.nix index 055273d0dac6..9839aadc9c1f 100644 --- a/pkgs/applications/virtualization/qemu/default.nix +++ b/pkgs/applications/virtualization/qemu/default.nix @@ -4,10 +4,11 @@ , makeWrapper , attr, libcap, libcap_ng , CoreServices, Cocoa, rez, setfile -, numaSupport ? stdenv.isLinux && !stdenv.isArm, numactl +, numaSupport ? stdenv.isLinux && !stdenv.isAarch32, numactl , seccompSupport ? stdenv.isLinux, libseccomp , pulseSupport ? !stdenv.isDarwin, libpulseaudio , sdlSupport ? !stdenv.isDarwin, SDL2 +, gtkSupport ? !stdenv.isDarwin && !xenSupport, gtk3, gettext, gnome3 , vncSupport ? true, libjpeg, libpng , spiceSupport ? !stdenv.isDarwin, spice, spice-protocol , usbredirSupport ? spiceSupport, usbredir @@ -28,7 +29,7 @@ let hostCpuTargets = if stdenv.isx86_64 then "i386-softmmu,x86_64-softmmu" else if stdenv.isi686 then "i386-softmmu" - else if stdenv.isArm then "arm-softmmu" + else if stdenv.isAarch32 then "arm-softmmu" else if stdenv.isAarch64 then "aarch64-softmmu" else throw "Don't know how to build a 'hostCpuOnly = true' QEMU"; in @@ -55,6 +56,7 @@ stdenv.mkDerivation rec { ++ optionals numaSupport [ numactl ] ++ optionals pulseSupport [ libpulseaudio ] ++ optionals sdlSupport [ SDL2 ] + ++ optionals gtkSupport [ gtk3 gettext gnome3.vte ] ++ optionals vncSupport [ libjpeg libpng ] ++ optionals spiceSupport [ spice-protocol spice ] ++ optionals usbredirSupport [ usbredir ] @@ -65,6 +67,8 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; + outputs = [ "out" "ga" ]; + patches = [ ./no-etc-install.patch ./statfs-flags.patch (fetchpatch { name = "glibc-2.27-memfd.patch"; url = "https://git.qemu.org/?p=qemu.git;a=patch;h=75e5b70e6b5dcc4f2219992d7cffa462aa406af0"; @@ -103,6 +107,8 @@ stdenv.mkDerivation rec { "--sysconfdir=/etc" "--localstatedir=/var" ] + # disable sysctl check on darwin. + ++ optional stdenv.isDarwin "--cpu=x86_64" ++ optional numaSupport "--enable-numa" ++ optional seccompSupport "--enable-seccomp" ++ optional spiceSupport "--enable-spice" @@ -110,6 +116,7 @@ stdenv.mkDerivation rec { ++ optional hostCpuOnly "--target-list=${hostCpuTargets}" ++ optional stdenv.isDarwin "--enable-cocoa" ++ optional stdenv.isLinux "--enable-linux-aio" + ++ optional gtkSupport "--enable-gtk" ++ optional xenSupport "--enable-xen" ++ optional openGLSupport "--enable-opengl" ++ optional virglSupport "--enable-virglrenderer"; @@ -119,13 +126,16 @@ stdenv.mkDerivation rec { for exe in $out/bin/qemu-system-* ; do paxmark m $exe done + # copy qemu-ga (guest agent) to separate output + mkdir -p $ga/bin + cp $out/bin/qemu-ga $ga/bin/ ''; # Add a ‘qemu-kvm’ wrapper for compatibility/convenience. postInstall = if stdenv.isx86_64 then ''makeWrapper $out/bin/qemu-system-x86_64 $out/bin/qemu-kvm --add-flags "\$([ -e /dev/kvm ] && echo -enable-kvm)"'' else if stdenv.isi686 then ''makeWrapper $out/bin/qemu-system-i386 $out/bin/qemu-kvm --add-flags "\$([ -e /dev/kvm ] && echo -enable-kvm)"'' - else if stdenv.isArm then ''makeWrapper $out/bin/qemu-system-arm $out/bin/qemu-kvm --add-flags "\$([ -e /dev/kvm ] && echo -enable-kvm)"'' + else if stdenv.isAarch32 then ''makeWrapper $out/bin/qemu-system-arm $out/bin/qemu-kvm --add-flags "\$([ -e /dev/kvm ] && echo -enable-kvm)"'' else if stdenv.isAarch64 then ''makeWrapper $out/bin/qemu-system-aarch64 $out/bin/qemu-kvm --add-flags "\$([ -e /dev/kvm ] && echo -enable-kvm)"'' else ""; diff --git a/pkgs/applications/virtualization/rkt/default.nix b/pkgs/applications/virtualization/rkt/default.nix index 947f4454362b..777dc6fe9304 100644 --- a/pkgs/applications/virtualization/rkt/default.nix +++ b/pkgs/applications/virtualization/rkt/default.nix @@ -12,7 +12,7 @@ let stage1Dir = "lib/rkt/stage1-images"; in stdenv.mkDerivation rec { - version = "1.29.0"; + version = "1.30.0"; name = "rkt-${version}"; BUILDDIR="build-${name}"; @@ -20,7 +20,7 @@ in stdenv.mkDerivation rec { owner = "coreos"; repo = "rkt"; rev = "v${version}"; - sha256 = "0wnhii15pr4z190iladfcl4jzj9sgyl1bn5v63a3yy6nkmz9cfda"; + sha256 = "0dqf83b7iin1np8k8k1m8i99ybga8vx932q7n2q64yghkw7p6i00"; }; stage1BaseImage = fetchurl { diff --git a/pkgs/applications/virtualization/singularity/default.nix b/pkgs/applications/virtualization/singularity/default.nix index 0a45b4d5d90d..d6913a94432b 100644 --- a/pkgs/applications/virtualization/singularity/default.nix +++ b/pkgs/applications/virtualization/singularity/default.nix @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { name = "singularity-${version}"; - version = "2.4.5"; + version = "2.4.6"; enableParallelBuilding = true; @@ -45,7 +45,7 @@ stdenv.mkDerivation rec { owner = "singularityware"; repo = "singularity"; rev = version; - sha256 = "0wz2in07197n5c2csww864nn2qmr925lqcjsd1kmlwwnrhq6lzl3"; + sha256 = "0bs1jqm7v7wv1kdxq8kyqn3gl5m76j0wwwgjyjnndrhczlsh5m1d"; }; nativeBuildInputs = [ autoreconfHook makeWrapper ]; diff --git a/pkgs/applications/virtualization/virt-manager/qt.nix b/pkgs/applications/virtualization/virt-manager/qt.nix index 9316496a547e..c8af6a1ccf55 100644 --- a/pkgs/applications/virtualization/virt-manager/qt.nix +++ b/pkgs/applications/virtualization/virt-manager/qt.nix @@ -1,17 +1,17 @@ { mkDerivation, lib, fetchFromGitHub, cmake, pkgconfig -, qtbase, qtmultimedia, qtsvg, qttools +, qtbase, qtmultimedia, qtsvg, qttools, krdc , libvncserver, libvirt, pcre, pixman, qtermwidget, spice-gtk, spice-protocol }: mkDerivation rec { name = "virt-manager-qt-${version}"; - version = "0.52.80"; + version = "0.60.88"; src = fetchFromGitHub { owner = "F1ash"; repo = "qt-virt-manager"; rev = "${version}"; - sha256 = "131rs6c90vdf1j40qj7k6s939y8la9ma0q3labxb7ac3r8hvhn6a"; + sha256 = "0hd5d8zdghc5clv8pa4h9zigshdrarfpmzyvrq56rjkm13lrdz52"; }; cmakeFlags = [ @@ -20,14 +20,12 @@ mkDerivation rec { ]; buildInputs = [ - qtbase qtmultimedia qtsvg + qtbase qtmultimedia qtsvg krdc libvirt libvncserver pcre pixman qtermwidget spice-gtk spice-protocol ]; nativeBuildInputs = [ cmake pkgconfig qttools ]; - enableParallelBuilding = true; - meta = with lib; { homepage = https://f1ash.github.io/qt-virt-manager; description = "Desktop user interface for managing virtual machines (QT)"; diff --git a/pkgs/applications/virtualization/xen/4.8.nix b/pkgs/applications/virtualization/xen/4.8.nix index cce91dcd5deb..79be1be11908 100644 --- a/pkgs/applications/virtualization/xen/4.8.nix +++ b/pkgs/applications/virtualization/xen/4.8.nix @@ -41,6 +41,12 @@ let sha256 = "1ki295pymbcfc64sjb9wqfwpv19p8vwgmnxankada3vm4fxg2rhq"; }); + qemuMemfdBuildFix = fetchpatch { + name = "xen-4.8-memfd-build-fix.patch"; + url = https://github.com/qemu/qemu/commit/75e5b70e6b5dcc4f2219992d7cffa462aa406af0.patch; + sha256 = "0gaz93kb33qc0jx6iphvny0yrd17i8zhcl3a9ky5ylc2idz0wiwa"; + }; + qemuDeps = [ udev pciutils xorg.libX11 SDL pixman acl glusterfs spice-protocol usbredir alsaLib @@ -63,6 +69,9 @@ callPackage (import ./generic.nix (rec { rev = "refs/tags/qemu-xen-${version}"; sha256 = "0lb7zd5nvr6znx47z93nbq4gj8xfb3622s8r2cvmpqmwnmlc3nd4"; }; + patches = [ + qemuMemfdBuildFix + ]; buildInputs = qemuDeps; meta.description = "Xen's fork of upstream Qemu"; }; diff --git a/pkgs/applications/window-managers/i3/pystatus.nix b/pkgs/applications/window-managers/i3/pystatus.nix index 68e77a54b5ad..1fed92764c10 100644 --- a/pkgs/applications/window-managers/i3/pystatus.nix +++ b/pkgs/applications/window-managers/i3/pystatus.nix @@ -1,14 +1,18 @@ -{ stdenv, fetchurl, libpulseaudio, python3Packages, extraLibs ? [] }: +{ stdenv, fetchFromGitHub, libpulseaudio, python3Packages, extraLibs ? [] }: python3Packages.buildPythonApplication rec { - name = "${pname}-${version}"; - version = "3.35"; + # i3pystatus moved to rolling release: + # https://github.com/enkore/i3pystatus/issues/584 + version = "unstable-2018-04-11"; pname = "i3pystatus"; disabled = !python3Packages.isPy3k; - src = fetchurl { - url = "mirror://pypi/i/${pname}/${name}.tar.gz"; - sha256 = "0g5m05rbqvq1qrspm6fyzky9xfhaz5pvc4hfzgdxrzijn8nfc860"; + src = fetchFromGitHub + { + owner = "enkore"; + repo = "i3pystatus"; + rev = "3efbd56bb7a851f16173ec6f0eef472b6e96c7cc"; + sha256 = "0r4mc23chxlaym7jcjnflw7mn5nbw3q8q4ix0nim7lh98yfndd3b"; }; propagatedBuildInputs = with python3Packages; [ keyring colour netifaces praw psutil basiciw ] ++ @@ -16,7 +20,8 @@ python3Packages.buildPythonApplication rec { libpulseaudioPath = stdenv.lib.makeLibraryPath [ libpulseaudio ]; ldWrapperSuffix = "--suffix LD_LIBRARY_PATH : \"${libpulseaudioPath}\""; - makeWrapperArgs = [ ldWrapperSuffix ]; # libpulseaudio.so is loaded manually + # LC_TIME != C results in locale.Error: unsupported locale setting + makeWrapperArgs = [ "--set LC_TIME C" ldWrapperSuffix ]; # libpulseaudio.so is loaded manually postInstall = '' makeWrapper ${python3Packages.python.interpreter} $out/bin/${pname}-python-interpreter \ diff --git a/pkgs/applications/window-managers/sawfish/default.nix b/pkgs/applications/window-managers/sawfish/default.nix index d18ffb507956..c219c81c2a50 100644 --- a/pkgs/applications/window-managers/sawfish/default.nix +++ b/pkgs/applications/window-managers/sawfish/default.nix @@ -11,12 +11,12 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "sawfish-${version}"; - version = "1.12.0"; + version = "1.12.90"; sourceName = "sawfish_${version}"; src = fetchurl { url = "http://download.tuxfamily.org/sawfish/${sourceName}.tar.xz"; - sha256 = "1z7awzgw8d15aw17kpbj460pcxq8l2rhkaxk47w7yg9qrmg0xja4"; + sha256 = "18p8srqqj9vjffg13qhspfz2gr1h4vfs10qzlv89g76r289iam31"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; diff --git a/pkgs/applications/window-managers/stumpwm/default.nix b/pkgs/applications/window-managers/stumpwm/default.nix index e7427fa7763a..117d4fe1d6a8 100644 --- a/pkgs/applications/window-managers/stumpwm/default.nix +++ b/pkgs/applications/window-managers/stumpwm/default.nix @@ -99,5 +99,6 @@ stdenv.mkDerivation rec { license = licenses.gpl2Plus; maintainers = with maintainers; [ the-kenny ]; platforms = platforms.linux; + broken = true; # 2018-04-11 }; } diff --git a/pkgs/applications/window-managers/sway/default.nix b/pkgs/applications/window-managers/sway/default.nix index d643e2dd2186..89e7b9dd0880 100644 --- a/pkgs/applications/window-managers/sway/default.nix +++ b/pkgs/applications/window-managers/sway/default.nix @@ -8,13 +8,13 @@ stdenv.mkDerivation rec { name = "sway-${version}"; - version = "0.15.1"; + version = "0.15.2"; src = fetchFromGitHub { owner = "swaywm"; repo = "sway"; rev = version; - sha256 = "00prns3dnafd19ap774p8v994i3p185ji0dnp2xxbkgh2z7sbwpi"; + sha256 = "1p9j5gv85lsgj4z28qja07dqyvqk41w6mlaflvvm9yxafx477g5n"; }; nativeBuildInputs = [ diff --git a/pkgs/applications/window-managers/weston/default.nix b/pkgs/applications/window-managers/weston/default.nix index 0a5e601b012d..4a15e3236168 100644 --- a/pkgs/applications/window-managers/weston/default.nix +++ b/pkgs/applications/window-managers/weston/default.nix @@ -7,11 +7,11 @@ stdenv.mkDerivation rec { name = "weston-${version}"; - version = "3.0.0"; + version = "4.0.0"; src = fetchurl { url = "http://wayland.freedesktop.org/releases/${name}.tar.xz"; - sha256 = "19936zlkb75xcaidd8fag4ah8000wrh2ziqy7nxkq36pimgdbqfd"; + sha256 = "0n2big8xw6g6n46zm1jyf00dv9r4d84visdz5b8vxpw3xzkhmz50"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/applications/window-managers/xmonad-log-applet/default.nix b/pkgs/applications/window-managers/xmonad/log-applet/default.nix index f2acf03958b6..f2acf03958b6 100644 --- a/pkgs/applications/window-managers/xmonad-log-applet/default.nix +++ b/pkgs/applications/window-managers/xmonad/log-applet/default.nix diff --git a/pkgs/applications/window-managers/xmonad-log-applet/fix-paths.patch b/pkgs/applications/window-managers/xmonad/log-applet/fix-paths.patch index 031843afb172..031843afb172 100644 --- a/pkgs/applications/window-managers/xmonad-log-applet/fix-paths.patch +++ b/pkgs/applications/window-managers/xmonad/log-applet/fix-paths.patch diff --git a/pkgs/build-support/bintools-wrapper/default.nix b/pkgs/build-support/bintools-wrapper/default.nix index 5c0436b73ddf..47301bbdde69 100644 --- a/pkgs/build-support/bintools-wrapper/default.nix +++ b/pkgs/build-support/bintools-wrapper/default.nix @@ -57,7 +57,7 @@ let else if targetPlatform.system == "i686-linux" then "${libc_lib}/lib/ld-linux.so.2" else if targetPlatform.system == "x86_64-linux" then "${libc_lib}/lib/ld-linux-x86-64.so.2" # ARM with a wildcard, which can be "" or "-armhf". - else if (with targetPlatform; isArm && isLinux) then "${libc_lib}/lib/ld-linux*.so.3" + else if (with targetPlatform; isAarch32 && isLinux) then "${libc_lib}/lib/ld-linux*.so.3" else if targetPlatform.system == "aarch64-linux" then "${libc_lib}/lib/ld-linux-aarch64.so.1" else if targetPlatform.system == "powerpc-linux" then "${libc_lib}/lib/ld.so.1" else if targetPlatform.isMips then "${libc_lib}/lib/ld.so.1" @@ -176,7 +176,7 @@ stdenv.mkDerivation { sep = optionalString (!targetPlatform.isMips) "-"; arch = /**/ if targetPlatform.isAarch64 then endianPrefix + "aarch64" - else if targetPlatform.isArm then endianPrefix + "arm" + else if targetPlatform.isAarch32 then endianPrefix + "arm" else if targetPlatform.isx86_64 then "x86-64" else if targetPlatform.isi686 then "i386" else if targetPlatform.isMips then { diff --git a/pkgs/build-support/bintools-wrapper/macos-sierra-reexport-hack.bash b/pkgs/build-support/bintools-wrapper/macos-sierra-reexport-hack.bash index a0c4e9edfcdb..71b9471cbc83 100644 --- a/pkgs/build-support/bintools-wrapper/macos-sierra-reexport-hack.bash +++ b/pkgs/build-support/bintools-wrapper/macos-sierra-reexport-hack.bash @@ -2,107 +2,245 @@ set -eu -o pipefail +# For cmd | while read; do ...; done +shopt -s lastpipe + path_backup="$PATH" if [ -n "@coreutils_bin@" ]; then PATH="@coreutils_bin@/bin" fi -declare -r recurThreshold=300 - -declare overflowCount=0 -for ((n=0; n < $#; ++n)); do - case "${!n}" in - -l*) let overflowCount+=1 ;; - -reexport-l*) let overflowCount+=1 ;; - *) ;; +declare -ri recurThreshold=200 +declare -i overflowCount=0 + +declare -ar origArgs=("$@") + +# Throw away what we won't need +declare -a parentArgs=() + +while (( $# )); do + case "$1" in + -l) + echo "cctools LD does not support '-l foo'" >&2 + exit 1 + ;; + -lazy_library | -reexport_library | -upward_library | -weak_library) + overflowCount+=1 + shift 2 + ;; + -l* | *.so.* | *.dylib | -lazy-l* | -reexport-l* | -upward-l* | -weak-l*) + overflowCount+=1 + shift 1 + ;; + *.a | *.o) + shift 1 + ;; + -L | -F) + # Evidentally ld doesn't like using the child's RPATH, so it still + # needs these. + parentArgs+=("$1" "$2") + shift 2 + ;; + -L?* | -F?*) + parentArgs+=("$1") + shift 1 + ;; + -o) + outputName="$2" + parentArgs+=("$1" "$2") + shift 2 + ;; + -install_name | -dylib_install_name | -dynamic-linker | -plugin) + parentArgs+=("$1" "$2") + shift 2 + ;; + -rpath) + # Only an rpath to the child is needed, which we will add + shift 2 + ;; + *) + if [[ -f "$1" ]]; then + # Propabably a non-standard object file like Haskell's + # `.dyn_o`. Skip it like other inputs + : + else + parentArgs+=("$1") + fi + shift 1 + ;; esac done -declare -a allArgs=() + if (( "$overflowCount" <= "$recurThreshold" )); then - allArgs=("$@") -else - declare -a childrenLookup=() childrenLink=() - - while (( $# )); do - case "$1" in - -L/*) - childrenLookup+=("$1") - allArgs+=("$1") - ;; - -L) - echo "cctools LD does not support '-L foo' or '-l foo'" >&2 - exit 1 - ;; - -l) - echo "cctools LD does not support '-L foo' or '-l foo'" >&2 - exit 1 - ;; - -lazy_library | -lazy_framework | -lto_library) - # We aren't linking any "azy_library", "to_library", etc. - allArgs+=("$1") - ;; - -lazy-l | -weak-l) allArgs+=("$1") ;; - # We can't so easily prevent header issues from these. - -lSystem) allArgs+=("$1") ;; - # Special case as indirection seems like a bad idea for something - # so fundamental. Can be removed for simplicity. - -l?* | -reexport-l?*) childrenLink+=("$1") ;; - *) allArgs+=("$1") ;; - esac - - shift - done + if [ -n "${NIX_DEBUG:-}" ]; then + echo "ld-wrapper: Only ${overflowCount} inputs counted while ${recurThreshold} is the ceiling, linking normally. " >&2 + fi + PATH="$path_backup" + exec @prog@ "${origArgs[@]}" +fi + + + +if [ -n "${NIX_DEBUG:-}" ]; then + echo "ld-wrapper: ${overflowCount} inputs counted when ${recurThreshold} is the ceiling, inspecting further. " >&2 +fi + +# Collect the normalized linker input +declare -a norm=() - declare n=0 - while (( $n < "${#childrenLink[@]}" )); do - if [[ "${childrenLink[n]}" = -l* ]]; then - childrenLink[n]="-reexport${childrenLink[n]}" - fi - let ++n +# Arguments are null-separated +@prog@ --dump-normalized-lib-args "${origArgs[@]}" | + while IFS= read -r -d '' input; do + norm+=("$input") done - unset n - - declare -r outputNameLibless=$(basename $( \ - if [[ -z "${outputName:+isUndefined}" ]]; then - echo unnamed - elif [[ "${outputName:0:3}" = lib ]]; then - echo "${outputName:3}" - else - echo "${outputName}" - fi)) - declare -ra children=("$outputNameLibless-reexport-delegate-0" \ - "$outputNameLibless-reexport-delegate-1") - - mkdir -p "$out/lib" - - PATH="$PATH:@out@/bin" - - symbolBloatObject=$outputNameLibless-symbol-hack.o - if [[ ! -e $symbolBloatObject ]]; then - # `-Q` means use GNU Assembler rather than Clang, avoiding an awkward - # dependency cycle. - printf '.private_extern _______child_hack_foo\nchild_hack_foo:\n' \ - | @targetPrefix@as -Q -- -o $symbolBloatObject + +declare -i leafCount=0 +declare lastLeaf='' +declare -a childrenInputs=() trailingInputs=() +while (( "${#norm[@]}" )); do + case "${norm[0]}" in + -lazy_library | -upward_library) + # TODO(@Ericson2314): Don't do that, but intersperse children + # between such args. + echo "ld-wrapper: Warning: Potentially changing link order" >&2 + trailingInputs+=("${norm[0]}" "${norm[1]}") + norm=("${norm[@]:2}") + ;; + -reexport_library | -weak_library) + childrenInputs+=("${norm[0]}" "${norm[1]}") + if [[ "${norm[1]}" != "$lastLeaf" ]]; then + leafCount+=1 + lastLeaf="${norm[1]}" + fi + norm=("${norm[@]:2}") + ;; + *.so | *.dylib) + childrenInputs+=(-reexport_library "${norm[0]}") + if [[ "${norm[0]}" != "$lastLeaf" ]]; then + leafCount+=1 + lastLeaf="${norm[0]}" + fi + norm=("${norm[@]:1}") + ;; + *.o | *.a) + # Don't delegate object files or static libs + parentArgs+=("${norm[0]}") + norm=("${norm[@]:1}") + ;; + *) + if [[ -f "${norm[0]}" ]]; then + # Propabably a non-standard object file. We'll let it by. + parentArgs+=("${norm[0]}") + norm=("${norm[@]:1}") + else + echo "ld-wrapper: Internal Error: Invalid normalized argument" >&2 + exit -1 + fi + ;; + esac +done + + + +if (( "$leafCount" <= "$recurThreshold" )); then + if [ -n "${NIX_DEBUG:-}" ]; then + echo "ld-wrapper: Only ${leafCount} *dynamic* inputs counted while ${recurThreshold} is the ceiling, linking normally. " >&2 + fi + PATH="$path_backup" + exec @prog@ "${origArgs[@]}" +fi + + + +if [ -n "${NIX_DEBUG:-}" ]; then + echo "ld-wrapper: ${leafCount} *dynamic* inputs counted when ${recurThreshold} is the ceiling, delegating to children. " >&2 +fi + +declare -r outputNameLibless=$( \ + if [[ -z "${outputName:+isUndefined}" ]]; then + echo unnamed + return 0; fi + baseName=$(basename ${outputName}) + if [[ "$baseName" = lib* ]]; then + baseName="${baseName:3}" + fi + echo "$baseName") + +declare -ra children=( + "$outputNameLibless-reexport-delegate-0" + "$outputNameLibless-reexport-delegate-1" +) + +mkdir -p "$out/lib" + +symbolBloatObject=$outputNameLibless-symbol-hack.o +if [[ ! -f $symbolBloatObject ]]; then + # `-Q` means use GNU Assembler rather than Clang, avoiding an awkward + # dependency cycle. + printf '.private_extern _______child_hack_foo\nchild_hack_foo:\n' | + PATH="$PATH:@out@/bin" @targetPrefix@as -Q -- -o $symbolBloatObject +fi + +# Split inputs between children +declare -a child0Inputs=() child1Inputs=("${childrenInputs[@]}") +let "countFirstChild = $leafCount / 2" || true +lastLeaf='' +while (( "$countFirstChild" )); do + case "${child1Inputs[0]}" in + -reexport_library | -weak_library) + child0Inputs+=("${child1Inputs[0]}" "${child1Inputs[1]}") + if [[ "${child1Inputs[1]}" != "$lastLeaf" ]]; then + let countFirstChild-=1 || true + lastLeaf="${child1Inputs[1]}" + fi + child1Inputs=("${child1Inputs[@]:2}") + ;; + *.so | *.dylib) + child0Inputs+=(-reexport_library "${child1Inputs[0]}") + if [[ "${child1Inputs[0]}" != "$lastLeaf" ]]; then + let countFirstChild-=1 || true + lastLeaf="${child1Inputs[1]}" + fi + child1Inputs=("${child1Inputs[@]:2}") + ;; + *) + echo "ld-wrapper: Internal Error: Invalid delegated input" >&2 + exit -1 + ;; + esac +done + + +# First half of libs +@out@/bin/@targetPrefix@ld \ + -macosx_version_min $MACOSX_DEPLOYMENT_TARGET -arch x86_64 -dylib \ + -o "$out/lib/lib${children[0]}.dylib" \ + -install_name "$out/lib/lib${children[0]}.dylib" \ + "$symbolBloatObject" "${child0Inputs[@]}" "${trailingInputs[@]}" + +# Second half of libs +@out@/bin/@targetPrefix@ld \ + -macosx_version_min $MACOSX_DEPLOYMENT_TARGET -arch x86_64 -dylib \ + -o "$out/lib/lib${children[1]}.dylib" \ + -install_name "$out/lib/lib${children[1]}.dylib" \ + "$symbolBloatObject" "${child1Inputs[@]}" "${trailingInputs[@]}" + +parentArgs+=("-L$out/lib" -rpath "$out/lib") +if [[ $outputName != *reexport-delegate* ]]; then + parentArgs+=("-l${children[0]}" "-l${children[1]}") +else + parentArgs+=("-reexport-l${children[0]}" "-reexport-l${children[1]}") +fi + +parentArgs+=("${trailingInputs[@]}") - # first half of libs - @targetPrefix@ld -macosx_version_min $MACOSX_DEPLOYMENT_TARGET -arch x86_64 -dylib \ - -o "$out/lib/lib${children[0]}.dylib" \ - -install_name "$out/lib/lib${children[0]}.dylib" \ - "${childrenLookup[@]}" "$symbolBloatObject" \ - "${childrenLink[@]:0:$((${#childrenLink[@]} / 2 ))}" - - # second half of libs - @targetPrefix@ld -macosx_version_min $MACOSX_DEPLOYMENT_TARGET -arch x86_64 -dylib \ - -o "$out/lib/lib${children[1]}.dylib" \ - -install_name "$out/lib/lib${children[1]}.dylib" \ - "${childrenLookup[@]}" "$symbolBloatObject" \ - "${childrenLink[@]:$((${#childrenLink[@]} / 2 ))}" - - allArgs+=("-L$out/lib" "-l${children[0]}" "-l${children[1]}") +if [ -n "${NIX_DEBUG:-}" ]; then + echo "flags using delegated children to @prog@:" >&2 + printf " %q\n" "${parentArgs[@]}" >&2 fi PATH="$path_backup" -exec @prog@ "${allArgs[@]}" +exec @prog@ "${parentArgs[@]}" diff --git a/pkgs/build-support/build-setupcfg/default.nix b/pkgs/build-support/build-setupcfg/default.nix index 62dda59f1d52..bc6482f0a88e 100644 --- a/pkgs/build-support/build-setupcfg/default.nix +++ b/pkgs/build-support/build-setupcfg/default.nix @@ -5,18 +5,20 @@ # * meta: Standard nixpkgs metadata. # * application: Whether this package is a python library or an # application which happens to be written in python. -pythonPackages: { src, info, meta ? {}, application ? false }: let +# * doCheck: Whether to run the test suites. +pythonPackages: +{ src, info, meta ? {}, application ? false, doCheck ? true }: let build = if application then pythonPackages.buildPythonApplication else pythonPackages.buildPythonPackage; in build { inherit (info) pname version; - inherit src meta; + inherit src meta doCheck; nativeBuildInputs = map (p: pythonPackages.${p}) ( (info.setup_requires or []) ++ - (info.tests_require or [])); + (if doCheck then (info.tests_require or []) else [])); propagatedBuildInputs = map (p: pythonPackages.${p}) (info.install_requires or []); diff --git a/pkgs/build-support/docker/default.nix b/pkgs/build-support/docker/default.nix index b8eda3d09673..75e279afdc37 100644 --- a/pkgs/build-support/docker/default.nix +++ b/pkgs/build-support/docker/default.nix @@ -497,6 +497,16 @@ rec { # Record the contents of the tarball with ls_tar. ls_tar temp/layer.tar >> baseFiles + # Append nix/store directory to the layer so that when the layer is loaded in the + # image /nix/store has read permissions for non-root users. + # nix/store is added only if the layer has /nix/store paths in it. + if [ $(wc -l < $layerClosure) -gt 1 ] && [ $(grep -c -e "^/nix/store$" baseFiles) -eq 0 ]; then + mkdir -p nix/store + chmod -R 555 nix + echo "./nix" >> layerFiles + echo "./nix/store" >> layerFiles + fi + # Get the files in the new layer which were *not* present in # the old layer, and record them as newFiles. comm <(sort -n baseFiles|uniq) \ diff --git a/pkgs/build-support/fetchcvs/builder.sh b/pkgs/build-support/fetchcvs/builder.sh index 6ee594b33b27..0975c3478820 100644 --- a/pkgs/build-support/fetchcvs/builder.sh +++ b/pkgs/build-support/fetchcvs/builder.sh @@ -1,5 +1,10 @@ source $stdenv/setup +(echo '#!/usr/bin/env sh'; \ + echo 'ssh -o UserKnownHostsFile=/dev/null -o StrictHostKeyChecking=no "$@"') > ssh +chmod +x ssh +export CVS_RSH=$PWD/ssh + # creating the export drictory and checking out there only to be able to # move the content without the root directory into $out ... # cvs -f -d "$url" export $tag -d "$out" "$module" diff --git a/pkgs/build-support/fetchcvs/default.nix b/pkgs/build-support/fetchcvs/default.nix index 9d9deb3f629e..1f7947d4d452 100644 --- a/pkgs/build-support/fetchcvs/default.nix +++ b/pkgs/build-support/fetchcvs/default.nix @@ -3,18 +3,18 @@ # tag="<tagname>" (get version by tag name) # If you don't specify neither one date="NOW" will be used (get latest) -{stdenvNoCC, cvs}: +{stdenvNoCC, cvs, openssh}: {cvsRoot, module, tag ? null, date ? null, sha256}: stdenvNoCC.mkDerivation { name = "cvs-export"; builder = ./builder.sh; - nativeBuildInputs = [cvs]; + nativeBuildInputs = [cvs openssh]; outputHashAlgo = "sha256"; outputHashMode = "recursive"; outputHash = sha256; - + inherit cvsRoot module sha256 tag date; } diff --git a/pkgs/build-support/rust/build-rust-crate.nix b/pkgs/build-support/rust/build-rust-crate.nix index b07a09d63559..e0aec6e0e18b 100644 --- a/pkgs/build-support/rust/build-rust-crate.nix +++ b/pkgs/build-support/rust/build-rust-crate.nix @@ -47,7 +47,7 @@ let makeDeps = dependencies: ''; configureCrate = - { crateName, crateVersion, crateAuthors, build, libName, crateFeatures, colors, libPath, release, buildDependencies, completeDeps, completeBuildDeps, verbose, dependencies }: + { crateName, crateVersion, crateAuthors, build, libName, crateFeatures, colors, libPath, release, buildDependencies, completeDeps, completeBuildDeps, verbose, dependencies, workspace_member }: let version_ = lib.splitString "-" crateVersion; versionPre = if lib.tail version_ == [] then "" else builtins.elemAt version_ 1; version = lib.splitString "." (lib.head version_); @@ -58,6 +58,7 @@ let makeDeps = dependencies: completeDepsDir = lib.concatStringsSep " " completeDeps; completeBuildDepsDir = lib.concatStringsSep " " completeBuildDeps; in '' + cd ${workspace_member} runHook preConfigure ${echo_build_heading colors} ${noisily colors verbose} @@ -146,10 +147,15 @@ let makeDeps = dependencies: mkdir -p $OUT_DIR target/build/${crateName}/build_script_build > target/build/${crateName}.opt set +e - EXTRA_BUILD=$(sed -n "s/^cargo:rustc-flags=\(.*\)/\1/p" target/build/${crateName}.opt | tr '\n' ' ') + EXTRA_BUILD=$(sed -n "s/^cargo:rustc-flags=\(.*\)/\1/p" target/build/${crateName}.opt | tr '\n' ' ' | sort -u) EXTRA_FEATURES=$(sed -n "s/^cargo:rustc-cfg=\(.*\)/--cfg \1/p" target/build/${crateName}.opt | tr '\n' ' ') - EXTRA_LINK=$(sed -n "s/^cargo:rustc-link-lib=\(.*\)/\1/p" target/build/${crateName}.opt | tr '\n' ' ') - EXTRA_LINK_SEARCH=$(sed -n "s/^cargo:rustc-link-search=\(.*\)/\1/p" target/build/${crateName}.opt | tr '\n' ' ') + EXTRA_LINK=$(sed -n "s/^cargo:rustc-link-lib=\(.*\)/\1/p" target/build/${crateName}.opt | tr '\n' ' ' | sort -u) + EXTRA_LINK_SEARCH=$(sed -n "s/^cargo:rustc-link-search=\(.*\)/\1/p" target/build/${crateName}.opt | tr '\n' ' ' | sort -u) + + for env in $(sed -n "s/^cargo:rustc-env=\(.*\)/\1/p" target/build/${crateName}.opt); do + export $env + done + CRATENAME=$(echo ${crateName} | sed -e "s/\(.*\)-sys$/\U\1/") grep -P "^cargo:(?!(rustc-|warning=|rerun-if-changed=|rerun-if-env-changed))" target/build/${crateName}.opt \ | sed -e "s/cargo:\([^=]*\)=\(.*\)/export DEP_$(echo $CRATENAME)_\U\1\E=\2/" > target/env @@ -171,8 +177,7 @@ let makeDeps = dependencies: dependencies, completeDeps, completeBuildDeps, crateFeatures, libName, build, release, libPath, crateType, metadata, crateBin, finalBins, - extraRustcOpts, - verbose, colors }: + extraRustcOpts, verbose, colors }: let depsDir = lib.concatStringsSep " " dependencies; completeDepsDir = lib.concatStringsSep " " completeDeps; @@ -182,7 +187,7 @@ let makeDeps = dependencies: rustcOpts = lib.lists.foldl' (opts: opt: opts + " " + opt) (if release then "-C opt-level=3" else "-C debuginfo=2") - extraRustcOpts; + (["-C codegen-units=1"] ++ extraRustcOpts); rustcMeta = "-C metadata=${metadata} -C extra-filename=-${metadata}"; version_ = lib.splitString "-" crateVersion; versionPre = if lib.tail version_ == [] then "" else builtins.elemAt version_ 1; @@ -221,12 +226,12 @@ let makeDeps = dependencies: build_bin() { crate_name=$1 crate_name_=$(echo $crate_name | sed -e "s/-/_/g") - main_file="" - if [[ ! -z $2 ]]; then + main_file="" + if [[ ! -z $2 ]]; then main_file=$2 - fi - echo_build_heading $@ - noisily rustc --crate-name $crate_name_ $main_file --crate-type bin ${rustcOpts}\ + fi + echo_build_heading $@ + noisily rustc --crate-name $crate_name_ $main_file --crate-type bin ${rustcOpts}\ ${crateFeatures} --out-dir target/bin --emit=dep-info,link -L dependency=target/deps \ $LINK ${deps}$EXTRA_LIB --cap-lints allow \ $BUILD_OUT_DIR $EXTRA_BUILD $EXTRA_FEATURES --color ${colors} @@ -374,7 +379,7 @@ stdenv.mkDerivation (rec { ); crateFeatures = if crate ? features then - lib.concatMapStringsSep " " (f: "--cfg feature=\\\"${f}\\\"") (crate.features ++ features) + lib.concatMapStringsSep " " (f: "--cfg feature=\\\"${f}\\\"") (crate.features ++ features) #" else ""; libName = if crate ? libName then crate.libName else crate.crateName; @@ -407,24 +412,26 @@ stdenv.mkDerivation (rec { ) "" crate.crateBin else ""; - build = if crate ? build then crate.build else ""; + build = crate.build or ""; + workspace_member = crate.workspace_member or "."; crateVersion = crate.version; crateAuthors = if crate ? authors && lib.isList crate.authors then crate.authors else []; crateType = if lib.attrByPath ["procMacro"] false crate then "proc-macro" else if lib.attrByPath ["plugin"] false crate then "dylib" else - if crate ? type then crate.type else "lib"; + (crate.type or "lib"); colors = lib.attrByPath [ "colors" ] "always" crate; configurePhase = configureCrate { inherit crateName dependencies buildDependencies completeDeps completeBuildDeps - crateFeatures libName build release libPath crateVersion + crateFeatures libName build workspace_member release libPath crateVersion crateAuthors verbose colors; }; extraRustcOpts = if crate ? extraRustcOpts then crate.extraRustcOpts else []; buildPhase = buildCrate { inherit crateName dependencies completeDeps completeBuildDeps - crateFeatures libName build release libPath crateType crateVersion - crateAuthors metadata crateBin finalBins verbose colors extraRustcOpts; + crateFeatures libName build release libPath crateType + crateVersion crateAuthors metadata crateBin finalBins verbose colors + extraRustcOpts; }; installPhase = installCrate crateName metadata; diff --git a/pkgs/build-support/rust/carnix.nix b/pkgs/build-support/rust/carnix.nix index ebb46b0f5921..5b79d607f9d5 100644 --- a/pkgs/build-support/rust/carnix.nix +++ b/pkgs/build-support/rust/carnix.nix @@ -1,4 +1,4 @@ -# Generated by carnix 0.6.5: carnix -o carnix.nix Cargo.lock +# Generated by carnix 0.7.2: carnix nix { lib, buildPlatform, buildRustCrate, fetchgit }: let kernel = buildPlatform.parsed.kernel.name; abi = buildPlatform.parsed.abi.name; @@ -18,35 +18,36 @@ let kernel = buildPlatform.parsed.kernel.name; ) [] (builtins.attrNames feat); in rec { - carnix = f: carnix_0_6_6 { features = carnix_0_6_6_features { carnix_0_6_6 = f; }; }; - aho_corasick_0_6_3_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + carnix = f: carnix_0_7_2 { features = carnix_0_7_2_features { carnix_0_7_2 = f; }; }; + __all = [ (carnix {}) ]; + aho_corasick_0_6_4_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "aho-corasick"; - version = "0.6.3"; + version = "0.6.4"; authors = [ "Andrew Gallant <jamslam@gmail.com>" ]; - sha256 = "1cpqzf6acj8lm06z3f1cg41wn6c2n9l3v49nh0dvimv4055qib6k"; + sha256 = "189v919mp6rzzgjp1khpn4zlq8ls81gh43x1lmc8kbkagdlpq888"; libName = "aho_corasick"; crateBin = [ { name = "aho-corasick-dot"; } ]; inherit dependencies buildDependencies features; }; - ansi_term_0_10_2_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + ansi_term_0_11_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "ansi_term"; - version = "0.10.2"; + version = "0.11.0"; authors = [ "ogham@bsago.me" "Ryan Scheel (Havvy) <ryan.havvy@gmail.com>" "Josh Triplett <josh@joshtriplett.org>" ]; - sha256 = "07k0hfmlhv43lihyxb9d81l5mq5zlpqvv30dkfd3knmv2ginasn9"; + sha256 = "08fk0p2xvkqpmz3zlrwnf6l8sj2vngw464rvzspzp31sbgxbwm4v"; inherit dependencies buildDependencies features; }; - atty_0_2_3_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + atty_0_2_8_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "atty"; - version = "0.2.3"; + version = "0.2.8"; authors = [ "softprops <d.tangren@gmail.com>" ]; - sha256 = "0zl0cjfgarp5y78nd755lpki5bbkj4hgmi88v265m543yg29i88f"; + sha256 = "03w1q3h4w7vhcdxdwa9cirjkzdjz3ja636fj3g64659z6yax6p6d"; inherit dependencies buildDependencies features; }; - backtrace_0_3_4_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + backtrace_0_3_6_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "backtrace"; - version = "0.3.4"; + version = "0.3.6"; authors = [ "Alex Crichton <alex@alexcrichton.com>" "The Rust Project Developers" ]; - sha256 = "1caba8w3rqd5ghr88ghyz5wgkf81dgx18bj1llkax6qmianc6gk7"; + sha256 = "00p77iqrv2p47m4y5lq1clb8fi1xfmnz2520frqx88497ff4zhrx"; inherit dependencies buildDependencies features; }; backtrace_sys_0_1_16_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { @@ -57,13 +58,6 @@ rec { build = "build.rs"; inherit dependencies buildDependencies features; }; - bitflags_0_7_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { - crateName = "bitflags"; - version = "0.7.0"; - authors = [ "The Rust Project Developers" ]; - sha256 = "1hr72xg5slm0z4pxs2hiy4wcyx3jva70h58b7mid8l0a4c8f7gn5"; - inherit dependencies buildDependencies features; - }; bitflags_1_0_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "bitflags"; version = "1.0.1"; @@ -71,18 +65,19 @@ rec { sha256 = "0p4b3nr0s5nda2qmm7xdhnvh4lkqk3xd8l9ffmwbvqw137vx7mj1"; inherit dependencies buildDependencies features; }; - carnix_0_6_6_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + carnix_0_7_2_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "carnix"; - version = "0.6.6"; + version = "0.7.2"; authors = [ "pe@pijul.org <pe@pijul.org>" ]; - sha256 = "1ai2r52j6vlrclhb7cvifx3lsg9naiy3jpsrbi3mmfmr6zbi7rdw"; + sha256 = "0zsmc4wiz7vill676mcdh6ibyzmr9rn030j555ncqgavs7k5yhq5"; + crateBin = [ { name = "cargo-generate-nixfile"; path = "src/cargo-generate-nixfile.rs"; } { name = "carnix"; path = "src/main.rs"; } ]; inherit dependencies buildDependencies features; }; - cc_1_0_3_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + cc_1_0_10_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "cc"; - version = "1.0.3"; + version = "1.0.10"; authors = [ "Alex Crichton <alex@alexcrichton.com>" ]; - sha256 = "193pwqgh79w6k0k29svyds5nnlrwx44myqyrw605d5jj4yk2zmpr"; + sha256 = "0fqchrxcrd2j2b9x7cqs49ck7b3ilsap8s9xhs75gzgl6c1ylpdn"; inherit dependencies buildDependencies features; }; cfg_if_0_1_2_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { @@ -92,27 +87,11 @@ rec { sha256 = "0x06hvrrqy96m97593823vvxcgvjaxckghwyy2jcyc8qc7c6cyhi"; inherit dependencies buildDependencies features; }; - chrono_0_4_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { - crateName = "chrono"; - version = "0.4.0"; - authors = [ "Kang Seonghoon <public+rust@mearie.org>" ]; - sha256 = "0hm53hi6v7b6b1va6vn96lx26wvj8gzi2g51s1j02nlz0jcprw6a"; - inherit dependencies buildDependencies features; - }; - clap_2_28_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + clap_2_31_2_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "clap"; - version = "2.28.0"; + version = "2.31.2"; authors = [ "Kevin K. <kbknapp@gmail.com>" ]; - sha256 = "0m0rj9xw6mja4gdhqmaldv0q5y5jfsfzbyzfd70mm3857aynq03k"; - inherit dependencies buildDependencies features; - }; - dbghelp_sys_0_2_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { - crateName = "dbghelp-sys"; - version = "0.2.0"; - authors = [ "Peter Atashian <retep998@gmail.com>" ]; - sha256 = "0ylpi3bbiy233m57hnisn1df1v0lbl7nsxn34b0anzsgg440hqpq"; - libName = "dbghelp"; - build = "build.rs"; + sha256 = "0r24ziw85a8y1sf2l21y4mvv5qan3rjafcshpyfsjfadqfxsij72"; inherit dependencies buildDependencies features; }; dtoa_0_4_2_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { @@ -122,18 +101,18 @@ rec { sha256 = "1bxsh6fags7nr36vlz07ik2a1rzyipc8x1y30kjk832hf2pzadmw"; inherit dependencies buildDependencies features; }; - either_1_4_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + either_1_5_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "either"; - version = "1.4.0"; + version = "1.5.0"; authors = [ "bluss" ]; - sha256 = "04kpfd84lvyrkb2z4sljlz2d3d5qczd0sb1yy37fgijq2yx3vb37"; + sha256 = "1f7kl2ln01y02m8fpd2zrdjiwqmgfvl9nxxrfry3k19d1gd2bsvz"; inherit dependencies buildDependencies features; }; - env_logger_0_5_3_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + env_logger_0_5_7_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "env_logger"; - version = "0.5.3"; + version = "0.5.7"; authors = [ "The Rust Project Developers" ]; - sha256 = "1i7jyxrwwv3w2h200ynq3fjg1iyyvi76ny215hi6d334vkkw2s2y"; + sha256 = "0wgd9fashmwbx5ssrxx69naam6hlb5c7qmh1nln645q4gms35i2l"; inherit dependencies buildDependencies features; }; error_chain_0_11_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { @@ -143,62 +122,61 @@ rec { sha256 = "19nz17q6dzp0mx2jhh9qbj45gkvvgcl7zq9z2ai5a8ihbisfj6d7"; inherit dependencies buildDependencies features; }; - fuchsia_zircon_0_2_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + fuchsia_zircon_0_3_3_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "fuchsia-zircon"; - version = "0.2.1"; + version = "0.3.3"; authors = [ "Raph Levien <raph@google.com>" ]; - sha256 = "0yd4rd7ql1vdr349p6vgq2dnwmpylky1kjp8g1zgvp250jxrhddb"; + sha256 = "0jrf4shb1699r4la8z358vri8318w4mdi6qzfqy30p2ymjlca4gk"; inherit dependencies buildDependencies features; }; - fuchsia_zircon_sys_0_2_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + fuchsia_zircon_sys_0_3_3_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "fuchsia-zircon-sys"; - version = "0.2.0"; + version = "0.3.3"; authors = [ "Raph Levien <raph@google.com>" ]; - sha256 = "1yrqsrjwlhl3di6prxf5xmyd82gyjaysldbka5wwk83z11mpqh4w"; + sha256 = "08jp1zxrm9jbrr6l26bjal4dbm8bxfy57ickdgibsqxr1n9j3hf5"; inherit dependencies buildDependencies features; }; - itertools_0_7_3_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + humantime_1_1_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + crateName = "humantime"; + version = "1.1.1"; + authors = [ "Paul Colomiets <paul@colomiets.name>" ]; + sha256 = "1lzdfsfzdikcp1qb6wcdvnsdv16pmzr7p7cv171vnbnyz2lrwbgn"; + libPath = "src/lib.rs"; + inherit dependencies buildDependencies features; + }; + itertools_0_7_8_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "itertools"; - version = "0.7.3"; + version = "0.7.8"; authors = [ "bluss" ]; - sha256 = "128a69cnmgpj38rs6lcwzya773d2vx7f9y7012iycjf9yi2pyckj"; + sha256 = "0ib30cd7d1icjxsa13mji1gry3grp72kx8p33yd84mphdbc3d357"; inherit dependencies buildDependencies features; }; - itoa_0_3_4_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + itoa_0_4_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "itoa"; - version = "0.3.4"; + version = "0.4.1"; authors = [ "David Tolnay <dtolnay@gmail.com>" ]; - sha256 = "1nfkzz6vrgj0d9l3yzjkkkqzdgs68y294fjdbl7jq118qi8xc9d9"; + sha256 = "1jyrsmrm5q4r2ipmq5hvvkqg0mgnlbk44lm7gr0v9ymvbrh2gbij"; inherit dependencies buildDependencies features; }; - kernel32_sys_0_2_2_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { - crateName = "kernel32-sys"; - version = "0.2.2"; - authors = [ "Peter Atashian <retep998@gmail.com>" ]; - sha256 = "1lrw1hbinyvr6cp28g60z97w32w8vsk6pahk64pmrv2fmby8srfj"; - libName = "kernel32"; - build = "build.rs"; - inherit dependencies buildDependencies features; - }; - lazy_static_0_2_11_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + lazy_static_1_0_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "lazy_static"; - version = "0.2.11"; + version = "1.0.0"; authors = [ "Marvin Löbel <loebel.marvin@gmail.com>" ]; - sha256 = "1x6871cvpy5b96yv4c7jvpq316fp5d4609s9py7qk6cd6x9k34vm"; + sha256 = "0wfvqyr2nvx2mbsrscg5y7gfa9skhb8p72ayanl8vl49pw24v4fh"; inherit dependencies buildDependencies features; }; - libc_0_2_33_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + libc_0_2_40_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "libc"; - version = "0.2.33"; + version = "0.2.40"; authors = [ "The Rust Project Developers" ]; - sha256 = "1l7synziccnvarsq2kk22vps720ih6chmn016bhr2bq54hblbnl1"; + sha256 = "1xfc39237ldzgr8x8wcflgdr8zssi3wif7g2zxc02d94gzkjsw83"; inherit dependencies buildDependencies features; }; - libsqlite3_sys_0_9_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + libsqlite3_sys_0_9_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "libsqlite3-sys"; - version = "0.9.0"; + version = "0.9.1"; authors = [ "John Gallagher <jgallagher@bignerdranch.com>" ]; - sha256 = "1pnx3i9h85si6cs4nhazfb28hsvk7dn0arnfvpdzpjdnj9z38q57"; + sha256 = "1j599xygsh564xmx29942w0sq7w05c1jipk6dsyrxj6b33kw3fw7"; build = "build.rs"; inherit dependencies buildDependencies features; }; @@ -230,6 +208,13 @@ rec { sha256 = "0dfb8ifl9nrc9kzgd5z91q6qg87sh285q1ih7xgrsglmqfav9lg7"; inherit dependencies buildDependencies features; }; + memchr_2_0_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + crateName = "memchr"; + version = "2.0.1"; + authors = [ "Andrew Gallant <jamslam@gmail.com>" "bluss" ]; + sha256 = "0ls2y47rjwapjdax6bp974gdp06ggm1v8d1h69wyydmh1nhgm5gr"; + inherit dependencies buildDependencies features; + }; nom_3_2_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "nom"; version = "3.2.1"; @@ -237,32 +222,11 @@ rec { sha256 = "1vcllxrz9hdw6j25kn020ka3psz1vkaqh1hm3yfak2240zrxgi07"; inherit dependencies buildDependencies features; }; - num_0_1_40_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { - crateName = "num"; - version = "0.1.40"; - authors = [ "The Rust Project Developers" ]; - sha256 = "0b29c25n9mpf6a921khj7a6y3hz5va4vgwppcd2if975qq1shakg"; - inherit dependencies buildDependencies features; - }; - num_integer_0_1_35_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { - crateName = "num-integer"; - version = "0.1.35"; - authors = [ "The Rust Project Developers" ]; - sha256 = "0xybj8isi9b6wc646d5rc043i8l8j6wy0vrl4pn995qms9fxbbcc"; - inherit dependencies buildDependencies features; - }; - num_iter_0_1_34_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { - crateName = "num-iter"; - version = "0.1.34"; - authors = [ "The Rust Project Developers" ]; - sha256 = "02cld7x9dzbqbs6sxxzq1i22z3awlcd6ljkgvhkfr9rsnaxphzl9"; - inherit dependencies buildDependencies features; - }; - num_traits_0_1_40_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + num_traits_0_2_2_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "num-traits"; - version = "0.1.40"; + version = "0.2.2"; authors = [ "The Rust Project Developers" ]; - sha256 = "1fr8ghp4i97q3agki54i0hpmqxv3s65i2mqd1pinc7w7arc3fplw"; + sha256 = "1gcqhcd27gi72al5salxlp3m374qr3xnc3zh249f7dsrxc9rmgh0"; inherit dependencies buildDependencies features; }; pkg_config_0_3_9_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { @@ -272,25 +236,39 @@ rec { sha256 = "06k8fxgrsrxj8mjpjcq1n7mn2p1shpxif4zg9y5h09c7vy20s146"; inherit dependencies buildDependencies features; }; - quote_0_3_15_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + proc_macro2_0_3_6_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + crateName = "proc-macro2"; + version = "0.3.6"; + authors = [ "Alex Crichton <alex@alexcrichton.com>" ]; + sha256 = "1viqlvsknzvgc2j0bcz53n94zxv7c816py7hv2r27y0bv1dq4iqp"; + inherit dependencies buildDependencies features; + }; + quick_error_1_2_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + crateName = "quick-error"; + version = "1.2.1"; + authors = [ "Paul Colomiets <paul@colomiets.name>" "Colin Kiegel <kiegel@gmx.de>" ]; + sha256 = "0vq41csw68ynaq2fy5dvldh4lx7pnbw6pr332kv5rvrz4pz0jnq6"; + inherit dependencies buildDependencies features; + }; + quote_0_5_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "quote"; - version = "0.3.15"; + version = "0.5.1"; authors = [ "David Tolnay <dtolnay@gmail.com>" ]; - sha256 = "09il61jv4kd1360spaj46qwyl21fv1qz18fsv2jra8wdnlgl5jsg"; + sha256 = "0jppgddqp6vp67ns4hpyf644n5678fligp711isp0xkvfv19la3r"; inherit dependencies buildDependencies features; }; - rand_0_3_18_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + rand_0_4_2_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "rand"; - version = "0.3.18"; + version = "0.4.2"; authors = [ "The Rust Project Developers" ]; - sha256 = "15d7c3myn968dzjs0a2pgv58hzdavxnq6swgj032lw2v966ir4xv"; + sha256 = "0h8pkg23wb67i8904sm76iyr1jlmhklb85vbpz9c9191a24xzkfm"; inherit dependencies buildDependencies features; }; - redox_syscall_0_1_32_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + redox_syscall_0_1_37_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "redox_syscall"; - version = "0.1.32"; + version = "0.1.37"; authors = [ "Jeremy Soller <jackpot51@gmail.com>" ]; - sha256 = "1axxj8x6ngh6npkzqc5h216fajkcyrdxdgb7m2f0n5xfclbk47fv"; + sha256 = "0qa0jl9cr3qp80an8vshp2mcn8rzvwiavs1398hq1vsjw7pc3h2v"; libName = "syscall"; inherit dependencies buildDependencies features; }; @@ -302,18 +280,25 @@ rec { libPath = "src/lib.rs"; inherit dependencies buildDependencies features; }; - regex_0_2_2_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + regex_0_2_10_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "regex"; - version = "0.2.2"; + version = "0.2.10"; authors = [ "The Rust Project Developers" ]; - sha256 = "1f1zrrynfylg0vcfyfp60bybq4rp5g1yk2k7lc7fyz7mmc7k2qr7"; + sha256 = "0cwdmcllssm984b5nnpr55rgla1yzw31kmp2imxdpgk6hvlhf1ca"; inherit dependencies buildDependencies features; }; - regex_syntax_0_4_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + regex_syntax_0_5_5_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "regex-syntax"; - version = "0.4.1"; + version = "0.5.5"; authors = [ "The Rust Project Developers" ]; - sha256 = "01yrsm68lj86ad1whgg1z95c2pfsvv58fz8qjcgw7mlszc0c08ls"; + sha256 = "1m5v66r6xxglgkdl1ci23qq0bl0k2wqplm6li4pmg1k7szvgxcbp"; + inherit dependencies buildDependencies features; + }; + remove_dir_all_0_5_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + crateName = "remove_dir_all"; + version = "0.5.0"; + authors = [ "Aaronepower <theaaronepower@gmail.com>" ]; + sha256 = "0cgmlm9xvf19z84zcb7d62c2lfv60g6gd58c9717giq7c9ib284y"; inherit dependencies buildDependencies features; }; rusqlite_0_13_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { @@ -323,75 +308,68 @@ rec { sha256 = "1hj2464ar2y4324sk3jx7m9byhkcp60krrrs1v1i8dlhhlnkb9hc"; inherit dependencies buildDependencies features; }; - rustc_demangle_0_1_5_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + rustc_demangle_0_1_7_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "rustc-demangle"; - version = "0.1.5"; + version = "0.1.7"; authors = [ "Alex Crichton <alex@alexcrichton.com>" ]; - sha256 = "096kkcx9j747700fhxj1s4rlwkj21pqjmvj64psdj6bakb2q13nc"; + sha256 = "0wrln6jvwmqrhyvqlw5vq9a2s4r04ja8mrybxjj9aaaar1fyvns6"; inherit dependencies buildDependencies features; }; - serde_1_0_21_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + serde_1_0_38_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "serde"; - version = "1.0.21"; + version = "1.0.38"; authors = [ "Erick Tryzelaar <erick.tryzelaar@gmail.com>" "David Tolnay <dtolnay@gmail.com>" ]; - sha256 = "10almq7pvx8s4ryiqk8gf7fj5igl0yq6dcjknwc67rkmxd8q50w3"; + sha256 = "0dri7vmzjsfmak1qq5wdinykqqvd5shpms504p8acpgyx7817jgk"; inherit dependencies buildDependencies features; }; - serde_derive_1_0_21_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + serde_derive_1_0_38_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "serde_derive"; - version = "1.0.21"; + version = "1.0.38"; authors = [ "Erick Tryzelaar <erick.tryzelaar@gmail.com>" "David Tolnay <dtolnay@gmail.com>" ]; - sha256 = "0r20qyimm9scfaz7lc0swnhik9d045zklmbidd0zzpd4b2f3jsqm"; + sha256 = "027c13sbnqkfzc8vxx0m6wnkr68im8kdbkbnix07dgw1l616yw0m"; procMacro = true; inherit dependencies buildDependencies features; }; - serde_derive_internals_0_17_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + serde_derive_internals_0_23_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "serde_derive_internals"; - version = "0.17.0"; + version = "0.23.1"; authors = [ "Erick Tryzelaar <erick.tryzelaar@gmail.com>" "David Tolnay <dtolnay@gmail.com>" ]; - sha256 = "1g1j3v6pj9wbcz3v3w4smjpwrcdwjicmf6yd5cbai04as9iwhw74"; + sha256 = "0bjgcn2irh6sd34q3j3xkbn5ghfgiv3cfdlffb31lh0bikwpk1b4"; inherit dependencies buildDependencies features; }; - serde_json_1_0_6_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + serde_json_1_0_14_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "serde_json"; - version = "1.0.6"; + version = "1.0.14"; authors = [ "Erick Tryzelaar <erick.tryzelaar@gmail.com>" "David Tolnay <dtolnay@gmail.com>" ]; - sha256 = "1kacyc59splwbg8gr7qs32pp9smgy1khq0ggnv07yxhs7h355vjz"; + sha256 = "053n2vbcx32f28pr8fxi0fxq7m3g0gm94kz9i1fmi1kiwq9j5lsj"; inherit dependencies buildDependencies features; }; - strsim_0_6_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + strsim_0_7_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "strsim"; - version = "0.6.0"; + version = "0.7.0"; authors = [ "Danny Guo <dannyguo91@gmail.com>" ]; - sha256 = "1lz85l6y68hr62lv4baww29yy7g8pg20dlr0lbaswxmmcb0wl7gd"; + sha256 = "0fy0k5f2705z73mb3x9459bpcvrx4ky8jpr4zikcbiwan4bnm0iv"; inherit dependencies buildDependencies features; }; - syn_0_11_11_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + syn_0_13_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "syn"; - version = "0.11.11"; - authors = [ "David Tolnay <dtolnay@gmail.com>" ]; - sha256 = "0yw8ng7x1dn5a6ykg0ib49y7r9nhzgpiq2989rqdp7rdz3n85502"; - inherit dependencies buildDependencies features; - }; - synom_0_11_3_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { - crateName = "synom"; - version = "0.11.3"; + version = "0.13.1"; authors = [ "David Tolnay <dtolnay@gmail.com>" ]; - sha256 = "1l6d1s9qjfp6ng2s2z8219igvlv7gyk8gby97sdykqc1r93d8rhc"; + sha256 = "1pimp7fpvillhz06xz0k6450h9nis3ab6h1j2hzrzykrpxs2qnyg"; inherit dependencies buildDependencies features; }; - tempdir_0_3_5_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + tempdir_0_3_7_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "tempdir"; - version = "0.3.5"; + version = "0.3.7"; authors = [ "The Rust Project Developers" ]; - sha256 = "0rirc5prqppzgd15fm8ayan349lgk2k5iqdkrbwrwrv5pm4znsnz"; + sha256 = "0y53sxybyljrr7lh0x0ysrsa7p7cljmwv9v80acy3rc6n97g67vy"; inherit dependencies buildDependencies features; }; - termcolor_0_3_3_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + termcolor_0_3_6_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "termcolor"; - version = "0.3.3"; + version = "0.3.6"; authors = [ "Andrew Gallant <jamslam@gmail.com>" ]; - sha256 = "1rb853jzvkbwm62373dhls4x4r3r5cvfcsxvqh0i75rhx5j8kwsz"; + sha256 = "0w609sa1apl1kii67ln2g82r4rrycw45zgjq7mxxjrx1fa21v05z"; inherit dependencies buildDependencies features; }; termion_1_5_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { @@ -408,25 +386,32 @@ rec { sha256 = "18jg79ndjlwndz01mlbh82kkr2arqm658yn5kwp65l5n1hz8w4yb"; inherit dependencies buildDependencies features; }; - thread_local_0_3_4_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + thread_local_0_3_5_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "thread_local"; - version = "0.3.4"; + version = "0.3.5"; authors = [ "Amanieu d'Antras <amanieu@gmail.com>" ]; - sha256 = "1y6cwyhhx2nkz4b3dziwhqdvgq830z8wjp32b40pjd8r0hxqv2jr"; + sha256 = "0mkp0sp91aqsk7brgygai4igv751r1754rsxn37mig3ag5rx8np6"; inherit dependencies buildDependencies features; }; - time_0_1_38_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + time_0_1_39_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "time"; - version = "0.1.38"; + version = "0.1.39"; authors = [ "The Rust Project Developers" ]; - sha256 = "1ws283vvz7c6jfiwn53rmc6kybapr4pjaahfxxrz232b0qzw7gcp"; + sha256 = "1ryy3bwhvyzj6fym123il38mk9ranm4vradj2a47l5ij8jd7w5if"; inherit dependencies buildDependencies features; }; - toml_0_4_5_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + toml_0_4_6_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "toml"; - version = "0.4.5"; + version = "0.4.6"; authors = [ "Alex Crichton <alex@alexcrichton.com>" ]; - sha256 = "06zxqhn3y58yzjfaykhcrvlf7p2dnn54kn3g4apmja3cn5b18lkk"; + sha256 = "0rfl7lyb5f67spk69s604nw87f97g7fvv36hj9v88qlr2bwyrn8v"; + inherit dependencies buildDependencies features; + }; + ucd_util_0_1_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + crateName = "ucd-util"; + version = "0.1.1"; + authors = [ "Andrew Gallant <jamslam@gmail.com>" ]; + sha256 = "02a8h3siipx52b832xc8m8rwasj6nx9jpiwfldw8hp6k205hgkn0"; inherit dependencies buildDependencies features; }; unicode_width_0_1_4_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { @@ -436,11 +421,11 @@ rec { sha256 = "1rp7a04icn9y5c0lm74nrd4py0rdl0af8bhdwq7g478n1xifpifl"; inherit dependencies buildDependencies features; }; - unicode_xid_0_0_4_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + unicode_xid_0_1_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "unicode-xid"; - version = "0.0.4"; + version = "0.1.0"; authors = [ "erick.tryzelaar <erick.tryzelaar@gmail.com>" "kwantam <kwantam@gmail.com>" ]; - sha256 = "1dc8wkkcd3s6534s5aw4lbjn8m67flkkbnajp5bl8408wdg8rh9v"; + sha256 = "05wdmwlfzxhq3nhsxn6wx4q8dhxzzfb9szsz6wiw092m1rjj01zj"; inherit dependencies buildDependencies features; }; unreachable_1_0_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { @@ -457,11 +442,11 @@ rec { sha256 = "0rzmqprwjv9yp1n0qqgahgm24872x6c0xddfym5pfndy7a36vkn0"; inherit dependencies buildDependencies features; }; - vcpkg_0_2_2_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + vcpkg_0_2_3_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "vcpkg"; - version = "0.2.2"; + version = "0.2.3"; authors = [ "Jim McGrath <jimmc2@gmail.com>" ]; - sha256 = "1fl5j0ksnwrnsrf1b1a9lqbjgnajdipq0030vsbhx81mb7d9478a"; + sha256 = "0achi8sfy0wm4q04gj7nwpq9xfx8ynk6vv4r12a3ijg26hispq0c"; inherit dependencies buildDependencies features; }; vec_map_0_8_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { @@ -478,141 +463,161 @@ rec { sha256 = "0h1dm0dx8dhf56a83k68mijyxigqhizpskwxfdrs1drwv2cdclv3"; inherit dependencies buildDependencies features; }; - winapi_0_2_8_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + winapi_0_3_4_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { crateName = "winapi"; - version = "0.2.8"; + version = "0.3.4"; authors = [ "Peter Atashian <retep998@gmail.com>" ]; - sha256 = "0a45b58ywf12vb7gvj6h3j264nydynmzyqz8d8rqxsj6icqv82as"; + sha256 = "1qbrf5dcnd8j36cawby5d9r5vx07r0l4ryf672pfncnp8895k9lx"; + build = "build.rs"; inherit dependencies buildDependencies features; }; - winapi_build_0_1_1_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { - crateName = "winapi-build"; - version = "0.1.1"; + winapi_i686_pc_windows_gnu_0_4_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + crateName = "winapi-i686-pc-windows-gnu"; + version = "0.4.0"; authors = [ "Peter Atashian <retep998@gmail.com>" ]; - sha256 = "1lxlpi87rkhxcwp2ykf1ldw3p108hwm24nywf3jfrvmff4rjhqga"; - libName = "build"; + sha256 = "05ihkij18r4gamjpxj4gra24514can762imjzlmak5wlzidplzrp"; + build = "build.rs"; inherit dependencies buildDependencies features; }; - wincolor_0_1_4_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { - crateName = "wincolor"; - version = "0.1.4"; - authors = [ "Andrew Gallant <jamslam@gmail.com>" ]; - sha256 = "0cxv6hadnj5vffb8a73y7055p59n20bpqd524df85cm29dcjl38a"; + winapi_x86_64_pc_windows_gnu_0_4_0_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + crateName = "winapi-x86_64-pc-windows-gnu"; + version = "0.4.0"; + authors = [ "Peter Atashian <retep998@gmail.com>" ]; + sha256 = "0n1ylmlsb8yg1v583i4xy0qmqg42275flvbc51hdqjjfjcl9vlbj"; + build = "build.rs"; inherit dependencies buildDependencies features; }; - aho_corasick_0_6_3 = { features?(aho_corasick_0_6_3_features {}) }: aho_corasick_0_6_3_ { - dependencies = mapFeatures features ([ memchr_1_0_2 ]); - }; - aho_corasick_0_6_3_features = f: updateFeatures f (rec { - aho_corasick_0_6_3.default = (f.aho_corasick_0_6_3.default or true); - memchr_1_0_2.default = true; - }) [ memchr_1_0_2_features ]; - ansi_term_0_10_2 = { features?(ansi_term_0_10_2_features {}) }: ansi_term_0_10_2_ {}; - ansi_term_0_10_2_features = f: updateFeatures f (rec { - ansi_term_0_10_2.default = (f.ansi_term_0_10_2.default or true); - }) []; - atty_0_2_3 = { features?(atty_0_2_3_features {}) }: atty_0_2_3_ { + wincolor_0_1_6_ = { dependencies?[], buildDependencies?[], features?[] }: buildRustCrate { + crateName = "wincolor"; + version = "0.1.6"; + authors = [ "Andrew Gallant <jamslam@gmail.com>" ]; + sha256 = "0f8m3l86pw6qi31jidqj78pgd15xj914850lyvsxkbln4f1drv47"; + inherit dependencies buildDependencies features; + }; + aho_corasick_0_6_4 = { features?(aho_corasick_0_6_4_features {}) }: aho_corasick_0_6_4_ { + dependencies = mapFeatures features ([ memchr_2_0_1 ]); + }; + aho_corasick_0_6_4_features = f: updateFeatures f (rec { + aho_corasick_0_6_4.default = (f.aho_corasick_0_6_4.default or true); + memchr_2_0_1.default = true; + }) [ memchr_2_0_1_features ]; + ansi_term_0_11_0 = { features?(ansi_term_0_11_0_features {}) }: ansi_term_0_11_0_ { + dependencies = (if kernel == "windows" then mapFeatures features ([ winapi_0_3_4 ]) else []); + }; + ansi_term_0_11_0_features = f: updateFeatures f (rec { + ansi_term_0_11_0.default = (f.ansi_term_0_11_0.default or true); + winapi_0_3_4.consoleapi = true; + winapi_0_3_4.default = true; + winapi_0_3_4.errhandlingapi = true; + winapi_0_3_4.processenv = true; + }) [ winapi_0_3_4_features ]; + atty_0_2_8 = { features?(atty_0_2_8_features {}) }: atty_0_2_8_ { dependencies = (if kernel == "redox" then mapFeatures features ([ termion_1_5_1 ]) else []) - ++ (if (kernel == "linux" || kernel == "darwin") then mapFeatures features ([ libc_0_2_33 ]) else []) - ++ (if kernel == "windows" then mapFeatures features ([ kernel32_sys_0_2_2 winapi_0_2_8 ]) else []); + ++ (if (kernel == "linux" || kernel == "darwin") then mapFeatures features ([ libc_0_2_40 ]) else []) + ++ (if kernel == "windows" then mapFeatures features ([ winapi_0_3_4 ]) else []); }; - atty_0_2_3_features = f: updateFeatures f (rec { - atty_0_2_3.default = (f.atty_0_2_3.default or true); - kernel32_sys_0_2_2.default = true; - libc_0_2_33.default = (f.libc_0_2_33.default or false); + atty_0_2_8_features = f: updateFeatures f (rec { + atty_0_2_8.default = (f.atty_0_2_8.default or true); + libc_0_2_40.default = (f.libc_0_2_40.default or false); termion_1_5_1.default = true; - winapi_0_2_8.default = true; - }) [ termion_1_5_1_features libc_0_2_33_features kernel32_sys_0_2_2_features winapi_0_2_8_features ]; - backtrace_0_3_4 = { features?(backtrace_0_3_4_features {}) }: backtrace_0_3_4_ { - dependencies = mapFeatures features ([ cfg_if_0_1_2 rustc_demangle_0_1_5 ]) + winapi_0_3_4.consoleapi = true; + winapi_0_3_4.default = true; + winapi_0_3_4.minwinbase = true; + winapi_0_3_4.minwindef = true; + winapi_0_3_4.processenv = true; + winapi_0_3_4.winbase = true; + }) [ termion_1_5_1_features libc_0_2_40_features winapi_0_3_4_features ]; + backtrace_0_3_6 = { features?(backtrace_0_3_6_features {}) }: backtrace_0_3_6_ { + dependencies = mapFeatures features ([ cfg_if_0_1_2 rustc_demangle_0_1_7 ]) ++ (if (kernel == "linux" || kernel == "darwin") && !(kernel == "fuchsia") && !(kernel == "emscripten") && !(kernel == "darwin") && !(kernel == "ios") then mapFeatures features ([ ] - ++ (if features.backtrace_0_3_4.backtrace-sys or false then [ backtrace_sys_0_1_16 ] else [])) else []) - ++ (if (kernel == "linux" || kernel == "darwin") then mapFeatures features ([ libc_0_2_33 ]) else []) + ++ (if features.backtrace_0_3_6.backtrace-sys or false then [ backtrace_sys_0_1_16 ] else [])) else []) + ++ (if (kernel == "linux" || kernel == "darwin") then mapFeatures features ([ libc_0_2_40 ]) else []) ++ (if kernel == "windows" then mapFeatures features ([ ] - ++ (if features.backtrace_0_3_4.dbghelp-sys or false then [ dbghelp_sys_0_2_0 ] else []) - ++ (if features.backtrace_0_3_4.kernel32-sys or false then [ kernel32_sys_0_2_2 ] else []) - ++ (if features.backtrace_0_3_4.winapi or false then [ winapi_0_2_8 ] else [])) else []); - features = mkFeatures (features.backtrace_0_3_4 or {}); - }; - backtrace_0_3_4_features = f: updateFeatures f (rec { - backtrace_0_3_4.addr2line = - (f.backtrace_0_3_4.addr2line or false) || - (f.backtrace_0_3_4.gimli-symbolize or false) || - (backtrace_0_3_4.gimli-symbolize or false); - backtrace_0_3_4.backtrace-sys = - (f.backtrace_0_3_4.backtrace-sys or false) || - (f.backtrace_0_3_4.libbacktrace or false) || - (backtrace_0_3_4.libbacktrace or false); - backtrace_0_3_4.coresymbolication = - (f.backtrace_0_3_4.coresymbolication or false) || - (f.backtrace_0_3_4.default or false) || - (backtrace_0_3_4.default or false); - backtrace_0_3_4.dbghelp = - (f.backtrace_0_3_4.dbghelp or false) || - (f.backtrace_0_3_4.default or false) || - (backtrace_0_3_4.default or false); - backtrace_0_3_4.dbghelp-sys = - (f.backtrace_0_3_4.dbghelp-sys or false) || - (f.backtrace_0_3_4.dbghelp or false) || - (backtrace_0_3_4.dbghelp or false); - backtrace_0_3_4.default = (f.backtrace_0_3_4.default or true); - backtrace_0_3_4.dladdr = - (f.backtrace_0_3_4.dladdr or false) || - (f.backtrace_0_3_4.default or false) || - (backtrace_0_3_4.default or false); - backtrace_0_3_4.findshlibs = - (f.backtrace_0_3_4.findshlibs or false) || - (f.backtrace_0_3_4.gimli-symbolize or false) || - (backtrace_0_3_4.gimli-symbolize or false); - backtrace_0_3_4.kernel32-sys = - (f.backtrace_0_3_4.kernel32-sys or false) || - (f.backtrace_0_3_4.dbghelp or false) || - (backtrace_0_3_4.dbghelp or false); - backtrace_0_3_4.libbacktrace = - (f.backtrace_0_3_4.libbacktrace or false) || - (f.backtrace_0_3_4.default or false) || - (backtrace_0_3_4.default or false); - backtrace_0_3_4.libunwind = - (f.backtrace_0_3_4.libunwind or false) || - (f.backtrace_0_3_4.default or false) || - (backtrace_0_3_4.default or false); - backtrace_0_3_4.rustc-serialize = - (f.backtrace_0_3_4.rustc-serialize or false) || - (f.backtrace_0_3_4.serialize-rustc or false) || - (backtrace_0_3_4.serialize-rustc or false); - backtrace_0_3_4.serde = - (f.backtrace_0_3_4.serde or false) || - (f.backtrace_0_3_4.serialize-serde or false) || - (backtrace_0_3_4.serialize-serde or false); - backtrace_0_3_4.serde_derive = - (f.backtrace_0_3_4.serde_derive or false) || - (f.backtrace_0_3_4.serialize-serde or false) || - (backtrace_0_3_4.serialize-serde or false); - backtrace_0_3_4.winapi = - (f.backtrace_0_3_4.winapi or false) || - (f.backtrace_0_3_4.dbghelp or false) || - (backtrace_0_3_4.dbghelp or false); + ++ (if features.backtrace_0_3_6.winapi or false then [ winapi_0_3_4 ] else [])) else []); + features = mkFeatures (features.backtrace_0_3_6 or {}); + }; + backtrace_0_3_6_features = f: updateFeatures f (rec { + backtrace_0_3_6.addr2line = + (f.backtrace_0_3_6.addr2line or false) || + (f.backtrace_0_3_6.gimli-symbolize or false) || + (backtrace_0_3_6.gimli-symbolize or false); + backtrace_0_3_6.backtrace-sys = + (f.backtrace_0_3_6.backtrace-sys or false) || + (f.backtrace_0_3_6.libbacktrace or false) || + (backtrace_0_3_6.libbacktrace or false); + backtrace_0_3_6.coresymbolication = + (f.backtrace_0_3_6.coresymbolication or false) || + (f.backtrace_0_3_6.default or false) || + (backtrace_0_3_6.default or false); + backtrace_0_3_6.dbghelp = + (f.backtrace_0_3_6.dbghelp or false) || + (f.backtrace_0_3_6.default or false) || + (backtrace_0_3_6.default or false); + backtrace_0_3_6.default = (f.backtrace_0_3_6.default or true); + backtrace_0_3_6.dladdr = + (f.backtrace_0_3_6.dladdr or false) || + (f.backtrace_0_3_6.default or false) || + (backtrace_0_3_6.default or false); + backtrace_0_3_6.findshlibs = + (f.backtrace_0_3_6.findshlibs or false) || + (f.backtrace_0_3_6.gimli-symbolize or false) || + (backtrace_0_3_6.gimli-symbolize or false); + backtrace_0_3_6.gimli = + (f.backtrace_0_3_6.gimli or false) || + (f.backtrace_0_3_6.gimli-symbolize or false) || + (backtrace_0_3_6.gimli-symbolize or false); + backtrace_0_3_6.libbacktrace = + (f.backtrace_0_3_6.libbacktrace or false) || + (f.backtrace_0_3_6.default or false) || + (backtrace_0_3_6.default or false); + backtrace_0_3_6.libunwind = + (f.backtrace_0_3_6.libunwind or false) || + (f.backtrace_0_3_6.default or false) || + (backtrace_0_3_6.default or false); + backtrace_0_3_6.memmap = + (f.backtrace_0_3_6.memmap or false) || + (f.backtrace_0_3_6.gimli-symbolize or false) || + (backtrace_0_3_6.gimli-symbolize or false); + backtrace_0_3_6.object = + (f.backtrace_0_3_6.object or false) || + (f.backtrace_0_3_6.gimli-symbolize or false) || + (backtrace_0_3_6.gimli-symbolize or false); + backtrace_0_3_6.rustc-serialize = + (f.backtrace_0_3_6.rustc-serialize or false) || + (f.backtrace_0_3_6.serialize-rustc or false) || + (backtrace_0_3_6.serialize-rustc or false); + backtrace_0_3_6.serde = + (f.backtrace_0_3_6.serde or false) || + (f.backtrace_0_3_6.serialize-serde or false) || + (backtrace_0_3_6.serialize-serde or false); + backtrace_0_3_6.serde_derive = + (f.backtrace_0_3_6.serde_derive or false) || + (f.backtrace_0_3_6.serialize-serde or false) || + (backtrace_0_3_6.serialize-serde or false); + backtrace_0_3_6.winapi = + (f.backtrace_0_3_6.winapi or false) || + (f.backtrace_0_3_6.dbghelp or false) || + (backtrace_0_3_6.dbghelp or false); backtrace_sys_0_1_16.default = true; cfg_if_0_1_2.default = true; - dbghelp_sys_0_2_0.default = true; - kernel32_sys_0_2_2.default = true; - libc_0_2_33.default = true; - rustc_demangle_0_1_5.default = true; - winapi_0_2_8.default = true; - }) [ cfg_if_0_1_2_features rustc_demangle_0_1_5_features backtrace_sys_0_1_16_features libc_0_2_33_features dbghelp_sys_0_2_0_features kernel32_sys_0_2_2_features winapi_0_2_8_features ]; + libc_0_2_40.default = true; + rustc_demangle_0_1_7.default = true; + winapi_0_3_4.dbghelp = true; + winapi_0_3_4.default = true; + winapi_0_3_4.minwindef = true; + winapi_0_3_4.processthreadsapi = true; + winapi_0_3_4.std = true; + winapi_0_3_4.winnt = true; + }) [ cfg_if_0_1_2_features rustc_demangle_0_1_7_features backtrace_sys_0_1_16_features libc_0_2_40_features winapi_0_3_4_features ]; backtrace_sys_0_1_16 = { features?(backtrace_sys_0_1_16_features {}) }: backtrace_sys_0_1_16_ { - dependencies = mapFeatures features ([ libc_0_2_33 ]); - buildDependencies = mapFeatures features ([ cc_1_0_3 ]); + dependencies = mapFeatures features ([ libc_0_2_40 ]); + buildDependencies = mapFeatures features ([ cc_1_0_10 ]); }; backtrace_sys_0_1_16_features = f: updateFeatures f (rec { backtrace_sys_0_1_16.default = (f.backtrace_sys_0_1_16.default or true); - cc_1_0_3.default = true; - libc_0_2_33.default = true; - }) [ libc_0_2_33_features cc_1_0_3_features ]; - bitflags_0_7_0 = { features?(bitflags_0_7_0_features {}) }: bitflags_0_7_0_ {}; - bitflags_0_7_0_features = f: updateFeatures f (rec { - bitflags_0_7_0.default = (f.bitflags_0_7_0.default or true); - }) []; + cc_1_0_10.default = true; + libc_0_2_40.default = true; + }) [ libc_0_2_40_features cc_1_0_10_features ]; bitflags_1_0_1 = { features?(bitflags_1_0_1_features {}) }: bitflags_1_0_1_ { features = mkFeatures (features.bitflags_1_0_1 or {}); }; @@ -623,159 +628,143 @@ rec { (f.bitflags_1_0_1.default or false) || (bitflags_1_0_1.default or false); }) []; - carnix_0_6_6 = { features?(carnix_0_6_6_features {}) }: carnix_0_6_6_ { - dependencies = mapFeatures features ([ clap_2_28_0 env_logger_0_5_3 error_chain_0_11_0 itertools_0_7_3 log_0_4_1 nom_3_2_1 regex_0_2_2 rusqlite_0_13_0 serde_1_0_21 serde_derive_1_0_21 serde_json_1_0_6 tempdir_0_3_5 toml_0_4_5 ]); + carnix_0_7_2 = { features?(carnix_0_7_2_features {}) }: carnix_0_7_2_ { + dependencies = mapFeatures features ([ clap_2_31_2 env_logger_0_5_7 error_chain_0_11_0 itertools_0_7_8 log_0_4_1 nom_3_2_1 regex_0_2_10 rusqlite_0_13_0 serde_1_0_38 serde_derive_1_0_38 serde_json_1_0_14 tempdir_0_3_7 toml_0_4_6 ]); }; - carnix_0_6_6_features = f: updateFeatures f (rec { - carnix_0_6_6.default = (f.carnix_0_6_6.default or true); - clap_2_28_0.default = true; - env_logger_0_5_3.default = true; + carnix_0_7_2_features = f: updateFeatures f (rec { + carnix_0_7_2.default = (f.carnix_0_7_2.default or true); + clap_2_31_2.default = true; + env_logger_0_5_7.default = true; error_chain_0_11_0.default = true; - itertools_0_7_3.default = true; + itertools_0_7_8.default = true; log_0_4_1.default = true; nom_3_2_1.default = true; - regex_0_2_2.default = true; + regex_0_2_10.default = true; rusqlite_0_13_0.default = true; - serde_1_0_21.default = true; - serde_derive_1_0_21.default = true; - serde_json_1_0_6.default = true; - tempdir_0_3_5.default = true; - toml_0_4_5.default = true; - }) [ clap_2_28_0_features env_logger_0_5_3_features error_chain_0_11_0_features itertools_0_7_3_features log_0_4_1_features nom_3_2_1_features regex_0_2_2_features rusqlite_0_13_0_features serde_1_0_21_features serde_derive_1_0_21_features serde_json_1_0_6_features tempdir_0_3_5_features toml_0_4_5_features ]; - cc_1_0_3 = { features?(cc_1_0_3_features {}) }: cc_1_0_3_ { + serde_1_0_38.default = true; + serde_derive_1_0_38.default = true; + serde_json_1_0_14.default = true; + tempdir_0_3_7.default = true; + toml_0_4_6.default = true; + }) [ clap_2_31_2_features env_logger_0_5_7_features error_chain_0_11_0_features itertools_0_7_8_features log_0_4_1_features nom_3_2_1_features regex_0_2_10_features rusqlite_0_13_0_features serde_1_0_38_features serde_derive_1_0_38_features serde_json_1_0_14_features tempdir_0_3_7_features toml_0_4_6_features ]; + cc_1_0_10 = { features?(cc_1_0_10_features {}) }: cc_1_0_10_ { dependencies = mapFeatures features ([]); - features = mkFeatures (features.cc_1_0_3 or {}); - }; - cc_1_0_3_features = f: updateFeatures f (rec { - cc_1_0_3.default = (f.cc_1_0_3.default or true); - cc_1_0_3.rayon = - (f.cc_1_0_3.rayon or false) || - (f.cc_1_0_3.parallel or false) || - (cc_1_0_3.parallel or false); + features = mkFeatures (features.cc_1_0_10 or {}); + }; + cc_1_0_10_features = f: updateFeatures f (rec { + cc_1_0_10.default = (f.cc_1_0_10.default or true); + cc_1_0_10.rayon = + (f.cc_1_0_10.rayon or false) || + (f.cc_1_0_10.parallel or false) || + (cc_1_0_10.parallel or false); }) []; cfg_if_0_1_2 = { features?(cfg_if_0_1_2_features {}) }: cfg_if_0_1_2_ {}; cfg_if_0_1_2_features = f: updateFeatures f (rec { cfg_if_0_1_2.default = (f.cfg_if_0_1_2.default or true); }) []; - chrono_0_4_0 = { features?(chrono_0_4_0_features {}) }: chrono_0_4_0_ { - dependencies = mapFeatures features ([ num_0_1_40 time_0_1_38 ]); - }; - chrono_0_4_0_features = f: updateFeatures f (rec { - chrono_0_4_0.default = (f.chrono_0_4_0.default or true); - num_0_1_40.default = (f.num_0_1_40.default or false); - time_0_1_38.default = true; - }) [ num_0_1_40_features time_0_1_38_features ]; - clap_2_28_0 = { features?(clap_2_28_0_features {}) }: clap_2_28_0_ { + clap_2_31_2 = { features?(clap_2_31_2_features {}) }: clap_2_31_2_ { dependencies = mapFeatures features ([ bitflags_1_0_1 textwrap_0_9_0 unicode_width_0_1_4 ] - ++ (if features.clap_2_28_0.ansi_term or false then [ ansi_term_0_10_2 ] else []) - ++ (if features.clap_2_28_0.atty or false then [ atty_0_2_3 ] else []) - ++ (if features.clap_2_28_0.strsim or false then [ strsim_0_6_0 ] else []) - ++ (if features.clap_2_28_0.vec_map or false then [ vec_map_0_8_0 ] else [])); - features = mkFeatures (features.clap_2_28_0 or {}); - }; - clap_2_28_0_features = f: updateFeatures f (rec { - ansi_term_0_10_2.default = true; - atty_0_2_3.default = true; + ++ (if features.clap_2_31_2.atty or false then [ atty_0_2_8 ] else []) + ++ (if features.clap_2_31_2.strsim or false then [ strsim_0_7_0 ] else []) + ++ (if features.clap_2_31_2.vec_map or false then [ vec_map_0_8_0 ] else [])) + ++ (if !(kernel == "windows") then mapFeatures features ([ ] + ++ (if features.clap_2_31_2.ansi_term or false then [ ansi_term_0_11_0 ] else [])) else []); + features = mkFeatures (features.clap_2_31_2 or {}); + }; + clap_2_31_2_features = f: updateFeatures f (rec { + ansi_term_0_11_0.default = true; + atty_0_2_8.default = true; bitflags_1_0_1.default = true; - clap_2_28_0.ansi_term = - (f.clap_2_28_0.ansi_term or false) || - (f.clap_2_28_0.color or false) || - (clap_2_28_0.color or false); - clap_2_28_0.atty = - (f.clap_2_28_0.atty or false) || - (f.clap_2_28_0.color or false) || - (clap_2_28_0.color or false); - clap_2_28_0.clippy = - (f.clap_2_28_0.clippy or false) || - (f.clap_2_28_0.lints or false) || - (clap_2_28_0.lints or false); - clap_2_28_0.color = - (f.clap_2_28_0.color or false) || - (f.clap_2_28_0.default or false) || - (clap_2_28_0.default or false); - clap_2_28_0.default = (f.clap_2_28_0.default or true); - clap_2_28_0.strsim = - (f.clap_2_28_0.strsim or false) || - (f.clap_2_28_0.suggestions or false) || - (clap_2_28_0.suggestions or false); - clap_2_28_0.suggestions = - (f.clap_2_28_0.suggestions or false) || - (f.clap_2_28_0.default or false) || - (clap_2_28_0.default or false); - clap_2_28_0.term_size = - (f.clap_2_28_0.term_size or false) || - (f.clap_2_28_0.wrap_help or false) || - (clap_2_28_0.wrap_help or false); - clap_2_28_0.vec_map = - (f.clap_2_28_0.vec_map or false) || - (f.clap_2_28_0.default or false) || - (clap_2_28_0.default or false); - clap_2_28_0.yaml = - (f.clap_2_28_0.yaml or false) || - (f.clap_2_28_0.doc or false) || - (clap_2_28_0.doc or false); - clap_2_28_0.yaml-rust = - (f.clap_2_28_0.yaml-rust or false) || - (f.clap_2_28_0.yaml or false) || - (clap_2_28_0.yaml or false); - strsim_0_6_0.default = true; + clap_2_31_2.ansi_term = + (f.clap_2_31_2.ansi_term or false) || + (f.clap_2_31_2.color or false) || + (clap_2_31_2.color or false); + clap_2_31_2.atty = + (f.clap_2_31_2.atty or false) || + (f.clap_2_31_2.color or false) || + (clap_2_31_2.color or false); + clap_2_31_2.clippy = + (f.clap_2_31_2.clippy or false) || + (f.clap_2_31_2.lints or false) || + (clap_2_31_2.lints or false); + clap_2_31_2.color = + (f.clap_2_31_2.color or false) || + (f.clap_2_31_2.default or false) || + (clap_2_31_2.default or false); + clap_2_31_2.default = (f.clap_2_31_2.default or true); + clap_2_31_2.strsim = + (f.clap_2_31_2.strsim or false) || + (f.clap_2_31_2.suggestions or false) || + (clap_2_31_2.suggestions or false); + clap_2_31_2.suggestions = + (f.clap_2_31_2.suggestions or false) || + (f.clap_2_31_2.default or false) || + (clap_2_31_2.default or false); + clap_2_31_2.term_size = + (f.clap_2_31_2.term_size or false) || + (f.clap_2_31_2.wrap_help or false) || + (clap_2_31_2.wrap_help or false); + clap_2_31_2.vec_map = + (f.clap_2_31_2.vec_map or false) || + (f.clap_2_31_2.default or false) || + (clap_2_31_2.default or false); + clap_2_31_2.yaml = + (f.clap_2_31_2.yaml or false) || + (f.clap_2_31_2.doc or false) || + (clap_2_31_2.doc or false); + clap_2_31_2.yaml-rust = + (f.clap_2_31_2.yaml-rust or false) || + (f.clap_2_31_2.yaml or false) || + (clap_2_31_2.yaml or false); + strsim_0_7_0.default = true; textwrap_0_9_0.default = true; textwrap_0_9_0.term_size = (f.textwrap_0_9_0.term_size or false) || - (clap_2_28_0.wrap_help or false) || - (f.clap_2_28_0.wrap_help or false); + (clap_2_31_2.wrap_help or false) || + (f.clap_2_31_2.wrap_help or false); unicode_width_0_1_4.default = true; vec_map_0_8_0.default = true; - }) [ ansi_term_0_10_2_features atty_0_2_3_features bitflags_1_0_1_features strsim_0_6_0_features textwrap_0_9_0_features unicode_width_0_1_4_features vec_map_0_8_0_features ]; - dbghelp_sys_0_2_0 = { features?(dbghelp_sys_0_2_0_features {}) }: dbghelp_sys_0_2_0_ { - dependencies = mapFeatures features ([ winapi_0_2_8 ]); - buildDependencies = mapFeatures features ([ winapi_build_0_1_1 ]); - }; - dbghelp_sys_0_2_0_features = f: updateFeatures f (rec { - dbghelp_sys_0_2_0.default = (f.dbghelp_sys_0_2_0.default or true); - winapi_0_2_8.default = true; - winapi_build_0_1_1.default = true; - }) [ winapi_0_2_8_features winapi_build_0_1_1_features ]; + }) [ atty_0_2_8_features bitflags_1_0_1_features strsim_0_7_0_features textwrap_0_9_0_features unicode_width_0_1_4_features vec_map_0_8_0_features ansi_term_0_11_0_features ]; dtoa_0_4_2 = { features?(dtoa_0_4_2_features {}) }: dtoa_0_4_2_ {}; dtoa_0_4_2_features = f: updateFeatures f (rec { dtoa_0_4_2.default = (f.dtoa_0_4_2.default or true); }) []; - either_1_4_0 = { features?(either_1_4_0_features {}) }: either_1_4_0_ { + either_1_5_0 = { features?(either_1_5_0_features {}) }: either_1_5_0_ { dependencies = mapFeatures features ([]); - features = mkFeatures (features.either_1_4_0 or {}); - }; - either_1_4_0_features = f: updateFeatures f (rec { - either_1_4_0.default = (f.either_1_4_0.default or true); - either_1_4_0.use_std = - (f.either_1_4_0.use_std or false) || - (f.either_1_4_0.default or false) || - (either_1_4_0.default or false); + features = mkFeatures (features.either_1_5_0 or {}); + }; + either_1_5_0_features = f: updateFeatures f (rec { + either_1_5_0.default = (f.either_1_5_0.default or true); + either_1_5_0.use_std = + (f.either_1_5_0.use_std or false) || + (f.either_1_5_0.default or false) || + (either_1_5_0.default or false); }) []; - env_logger_0_5_3 = { features?(env_logger_0_5_3_features {}) }: env_logger_0_5_3_ { - dependencies = mapFeatures features ([ atty_0_2_3 chrono_0_4_0 log_0_4_1 termcolor_0_3_3 ] - ++ (if features.env_logger_0_5_3.regex or false then [ regex_0_2_2 ] else [])); - features = mkFeatures (features.env_logger_0_5_3 or {}); - }; - env_logger_0_5_3_features = f: updateFeatures f (rec { - atty_0_2_3.default = true; - chrono_0_4_0.default = true; - env_logger_0_5_3.default = (f.env_logger_0_5_3.default or true); - env_logger_0_5_3.regex = - (f.env_logger_0_5_3.regex or false) || - (f.env_logger_0_5_3.default or false) || - (env_logger_0_5_3.default or false); + env_logger_0_5_7 = { features?(env_logger_0_5_7_features {}) }: env_logger_0_5_7_ { + dependencies = mapFeatures features ([ atty_0_2_8 humantime_1_1_1 log_0_4_1 termcolor_0_3_6 ] + ++ (if features.env_logger_0_5_7.regex or false then [ regex_0_2_10 ] else [])); + features = mkFeatures (features.env_logger_0_5_7 or {}); + }; + env_logger_0_5_7_features = f: updateFeatures f (rec { + atty_0_2_8.default = true; + env_logger_0_5_7.default = (f.env_logger_0_5_7.default or true); + env_logger_0_5_7.regex = + (f.env_logger_0_5_7.regex or false) || + (f.env_logger_0_5_7.default or false) || + (env_logger_0_5_7.default or false); + humantime_1_1_1.default = true; log_0_4_1.default = true; log_0_4_1.std = true; - regex_0_2_2.default = true; - termcolor_0_3_3.default = true; - }) [ atty_0_2_3_features chrono_0_4_0_features log_0_4_1_features regex_0_2_2_features termcolor_0_3_3_features ]; + regex_0_2_10.default = true; + termcolor_0_3_6.default = true; + }) [ atty_0_2_8_features humantime_1_1_1_features log_0_4_1_features regex_0_2_10_features termcolor_0_3_6_features ]; error_chain_0_11_0 = { features?(error_chain_0_11_0_features {}) }: error_chain_0_11_0_ { dependencies = mapFeatures features ([ ] - ++ (if features.error_chain_0_11_0.backtrace or false then [ backtrace_0_3_4 ] else [])); + ++ (if features.error_chain_0_11_0.backtrace or false then [ backtrace_0_3_6 ] else [])); features = mkFeatures (features.error_chain_0_11_0 or {}); }; error_chain_0_11_0_features = f: updateFeatures f (rec { - backtrace_0_3_4.default = true; + backtrace_0_3_6.default = true; error_chain_0_11_0.backtrace = (f.error_chain_0_11_0.backtrace or false) || (f.error_chain_0_11_0.default or false) || @@ -785,129 +774,129 @@ rec { (f.error_chain_0_11_0.example_generated or false) || (f.error_chain_0_11_0.default or false) || (error_chain_0_11_0.default or false); - }) [ backtrace_0_3_4_features ]; - fuchsia_zircon_0_2_1 = { features?(fuchsia_zircon_0_2_1_features {}) }: fuchsia_zircon_0_2_1_ { - dependencies = mapFeatures features ([ fuchsia_zircon_sys_0_2_0 ]); - }; - fuchsia_zircon_0_2_1_features = f: updateFeatures f (rec { - fuchsia_zircon_0_2_1.default = (f.fuchsia_zircon_0_2_1.default or true); - fuchsia_zircon_sys_0_2_0.default = true; - }) [ fuchsia_zircon_sys_0_2_0_features ]; - fuchsia_zircon_sys_0_2_0 = { features?(fuchsia_zircon_sys_0_2_0_features {}) }: fuchsia_zircon_sys_0_2_0_ { - dependencies = mapFeatures features ([ bitflags_0_7_0 ]); - }; - fuchsia_zircon_sys_0_2_0_features = f: updateFeatures f (rec { - bitflags_0_7_0.default = true; - fuchsia_zircon_sys_0_2_0.default = (f.fuchsia_zircon_sys_0_2_0.default or true); - }) [ bitflags_0_7_0_features ]; - itertools_0_7_3 = { features?(itertools_0_7_3_features {}) }: itertools_0_7_3_ { - dependencies = mapFeatures features ([ either_1_4_0 ]); - features = mkFeatures (features.itertools_0_7_3 or {}); - }; - itertools_0_7_3_features = f: updateFeatures f (rec { - either_1_4_0.default = (f.either_1_4_0.default or false); - itertools_0_7_3.default = (f.itertools_0_7_3.default or true); - itertools_0_7_3.use_std = - (f.itertools_0_7_3.use_std or false) || - (f.itertools_0_7_3.default or false) || - (itertools_0_7_3.default or false); - }) [ either_1_4_0_features ]; - itoa_0_3_4 = { features?(itoa_0_3_4_features {}) }: itoa_0_3_4_ { - features = mkFeatures (features.itoa_0_3_4 or {}); - }; - itoa_0_3_4_features = f: updateFeatures f (rec { - itoa_0_3_4.default = (f.itoa_0_3_4.default or true); + }) [ backtrace_0_3_6_features ]; + fuchsia_zircon_0_3_3 = { features?(fuchsia_zircon_0_3_3_features {}) }: fuchsia_zircon_0_3_3_ { + dependencies = mapFeatures features ([ bitflags_1_0_1 fuchsia_zircon_sys_0_3_3 ]); + }; + fuchsia_zircon_0_3_3_features = f: updateFeatures f (rec { + bitflags_1_0_1.default = true; + fuchsia_zircon_0_3_3.default = (f.fuchsia_zircon_0_3_3.default or true); + fuchsia_zircon_sys_0_3_3.default = true; + }) [ bitflags_1_0_1_features fuchsia_zircon_sys_0_3_3_features ]; + fuchsia_zircon_sys_0_3_3 = { features?(fuchsia_zircon_sys_0_3_3_features {}) }: fuchsia_zircon_sys_0_3_3_ {}; + fuchsia_zircon_sys_0_3_3_features = f: updateFeatures f (rec { + fuchsia_zircon_sys_0_3_3.default = (f.fuchsia_zircon_sys_0_3_3.default or true); }) []; - kernel32_sys_0_2_2 = { features?(kernel32_sys_0_2_2_features {}) }: kernel32_sys_0_2_2_ { - dependencies = mapFeatures features ([ winapi_0_2_8 ]); - buildDependencies = mapFeatures features ([ winapi_build_0_1_1 ]); - }; - kernel32_sys_0_2_2_features = f: updateFeatures f (rec { - kernel32_sys_0_2_2.default = (f.kernel32_sys_0_2_2.default or true); - winapi_0_2_8.default = true; - winapi_build_0_1_1.default = true; - }) [ winapi_0_2_8_features winapi_build_0_1_1_features ]; - lazy_static_0_2_11 = { features?(lazy_static_0_2_11_features {}) }: lazy_static_0_2_11_ { + humantime_1_1_1 = { features?(humantime_1_1_1_features {}) }: humantime_1_1_1_ { + dependencies = mapFeatures features ([ quick_error_1_2_1 ]); + }; + humantime_1_1_1_features = f: updateFeatures f (rec { + humantime_1_1_1.default = (f.humantime_1_1_1.default or true); + quick_error_1_2_1.default = true; + }) [ quick_error_1_2_1_features ]; + itertools_0_7_8 = { features?(itertools_0_7_8_features {}) }: itertools_0_7_8_ { + dependencies = mapFeatures features ([ either_1_5_0 ]); + features = mkFeatures (features.itertools_0_7_8 or {}); + }; + itertools_0_7_8_features = f: updateFeatures f (rec { + either_1_5_0.default = (f.either_1_5_0.default or false); + itertools_0_7_8.default = (f.itertools_0_7_8.default or true); + itertools_0_7_8.use_std = + (f.itertools_0_7_8.use_std or false) || + (f.itertools_0_7_8.default or false) || + (itertools_0_7_8.default or false); + }) [ either_1_5_0_features ]; + itoa_0_4_1 = { features?(itoa_0_4_1_features {}) }: itoa_0_4_1_ { + features = mkFeatures (features.itoa_0_4_1 or {}); + }; + itoa_0_4_1_features = f: updateFeatures f (rec { + itoa_0_4_1.default = (f.itoa_0_4_1.default or true); + itoa_0_4_1.std = + (f.itoa_0_4_1.std or false) || + (f.itoa_0_4_1.default or false) || + (itoa_0_4_1.default or false); + }) []; + lazy_static_1_0_0 = { features?(lazy_static_1_0_0_features {}) }: lazy_static_1_0_0_ { dependencies = mapFeatures features ([]); - features = mkFeatures (features.lazy_static_0_2_11 or {}); - }; - lazy_static_0_2_11_features = f: updateFeatures f (rec { - lazy_static_0_2_11.compiletest_rs = - (f.lazy_static_0_2_11.compiletest_rs or false) || - (f.lazy_static_0_2_11.compiletest or false) || - (lazy_static_0_2_11.compiletest or false); - lazy_static_0_2_11.default = (f.lazy_static_0_2_11.default or true); - lazy_static_0_2_11.nightly = - (f.lazy_static_0_2_11.nightly or false) || - (f.lazy_static_0_2_11.spin_no_std or false) || - (lazy_static_0_2_11.spin_no_std or false); - lazy_static_0_2_11.spin = - (f.lazy_static_0_2_11.spin or false) || - (f.lazy_static_0_2_11.spin_no_std or false) || - (lazy_static_0_2_11.spin_no_std or false); + features = mkFeatures (features.lazy_static_1_0_0 or {}); + }; + lazy_static_1_0_0_features = f: updateFeatures f (rec { + lazy_static_1_0_0.compiletest_rs = + (f.lazy_static_1_0_0.compiletest_rs or false) || + (f.lazy_static_1_0_0.compiletest or false) || + (lazy_static_1_0_0.compiletest or false); + lazy_static_1_0_0.default = (f.lazy_static_1_0_0.default or true); + lazy_static_1_0_0.nightly = + (f.lazy_static_1_0_0.nightly or false) || + (f.lazy_static_1_0_0.spin_no_std or false) || + (lazy_static_1_0_0.spin_no_std or false); + lazy_static_1_0_0.spin = + (f.lazy_static_1_0_0.spin or false) || + (f.lazy_static_1_0_0.spin_no_std or false) || + (lazy_static_1_0_0.spin_no_std or false); }) []; - libc_0_2_33 = { features?(libc_0_2_33_features {}) }: libc_0_2_33_ { - features = mkFeatures (features.libc_0_2_33 or {}); - }; - libc_0_2_33_features = f: updateFeatures f (rec { - libc_0_2_33.default = (f.libc_0_2_33.default or true); - libc_0_2_33.use_std = - (f.libc_0_2_33.use_std or false) || - (f.libc_0_2_33.default or false) || - (libc_0_2_33.default or false); + libc_0_2_40 = { features?(libc_0_2_40_features {}) }: libc_0_2_40_ { + features = mkFeatures (features.libc_0_2_40 or {}); + }; + libc_0_2_40_features = f: updateFeatures f (rec { + libc_0_2_40.default = (f.libc_0_2_40.default or true); + libc_0_2_40.use_std = + (f.libc_0_2_40.use_std or false) || + (f.libc_0_2_40.default or false) || + (libc_0_2_40.default or false); }) []; - libsqlite3_sys_0_9_0 = { features?(libsqlite3_sys_0_9_0_features {}) }: libsqlite3_sys_0_9_0_ { + libsqlite3_sys_0_9_1 = { features?(libsqlite3_sys_0_9_1_features {}) }: libsqlite3_sys_0_9_1_ { dependencies = (if abi == "msvc" then mapFeatures features ([]) else []); buildDependencies = mapFeatures features ([ ] - ++ (if features.libsqlite3_sys_0_9_0.pkg-config or false then [ pkg_config_0_3_9 ] else [])); - features = mkFeatures (features.libsqlite3_sys_0_9_0 or {}); - }; - libsqlite3_sys_0_9_0_features = f: updateFeatures f (rec { - libsqlite3_sys_0_9_0.bindgen = - (f.libsqlite3_sys_0_9_0.bindgen or false) || - (f.libsqlite3_sys_0_9_0.buildtime_bindgen or false) || - (libsqlite3_sys_0_9_0.buildtime_bindgen or false); - libsqlite3_sys_0_9_0.cc = - (f.libsqlite3_sys_0_9_0.cc or false) || - (f.libsqlite3_sys_0_9_0.bundled or false) || - (libsqlite3_sys_0_9_0.bundled or false); - libsqlite3_sys_0_9_0.default = (f.libsqlite3_sys_0_9_0.default or true); - libsqlite3_sys_0_9_0.min_sqlite_version_3_6_8 = - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_6_8 or false) || - (f.libsqlite3_sys_0_9_0.default or false) || - (libsqlite3_sys_0_9_0.default or false); - libsqlite3_sys_0_9_0.pkg-config = - (f.libsqlite3_sys_0_9_0.pkg-config or false) || - (f.libsqlite3_sys_0_9_0.buildtime_bindgen or false) || - (libsqlite3_sys_0_9_0.buildtime_bindgen or false) || - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_6_11 or false) || - (libsqlite3_sys_0_9_0.min_sqlite_version_3_6_11 or false) || - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_6_23 or false) || - (libsqlite3_sys_0_9_0.min_sqlite_version_3_6_23 or false) || - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_6_8 or false) || - (libsqlite3_sys_0_9_0.min_sqlite_version_3_6_8 or false) || - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_7_16 or false) || - (libsqlite3_sys_0_9_0.min_sqlite_version_3_7_16 or false) || - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_7_3 or false) || - (libsqlite3_sys_0_9_0.min_sqlite_version_3_7_3 or false) || - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_7_4 or false) || - (libsqlite3_sys_0_9_0.min_sqlite_version_3_7_4 or false); - libsqlite3_sys_0_9_0.vcpkg = - (f.libsqlite3_sys_0_9_0.vcpkg or false) || - (f.libsqlite3_sys_0_9_0.buildtime_bindgen or false) || - (libsqlite3_sys_0_9_0.buildtime_bindgen or false) || - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_6_11 or false) || - (libsqlite3_sys_0_9_0.min_sqlite_version_3_6_11 or false) || - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_6_23 or false) || - (libsqlite3_sys_0_9_0.min_sqlite_version_3_6_23 or false) || - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_6_8 or false) || - (libsqlite3_sys_0_9_0.min_sqlite_version_3_6_8 or false) || - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_7_16 or false) || - (libsqlite3_sys_0_9_0.min_sqlite_version_3_7_16 or false) || - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_7_3 or false) || - (libsqlite3_sys_0_9_0.min_sqlite_version_3_7_3 or false) || - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_7_4 or false) || - (libsqlite3_sys_0_9_0.min_sqlite_version_3_7_4 or false); + ++ (if features.libsqlite3_sys_0_9_1.pkg-config or false then [ pkg_config_0_3_9 ] else [])); + features = mkFeatures (features.libsqlite3_sys_0_9_1 or {}); + }; + libsqlite3_sys_0_9_1_features = f: updateFeatures f (rec { + libsqlite3_sys_0_9_1.bindgen = + (f.libsqlite3_sys_0_9_1.bindgen or false) || + (f.libsqlite3_sys_0_9_1.buildtime_bindgen or false) || + (libsqlite3_sys_0_9_1.buildtime_bindgen or false); + libsqlite3_sys_0_9_1.cc = + (f.libsqlite3_sys_0_9_1.cc or false) || + (f.libsqlite3_sys_0_9_1.bundled or false) || + (libsqlite3_sys_0_9_1.bundled or false); + libsqlite3_sys_0_9_1.default = (f.libsqlite3_sys_0_9_1.default or true); + libsqlite3_sys_0_9_1.min_sqlite_version_3_6_8 = + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_6_8 or false) || + (f.libsqlite3_sys_0_9_1.default or false) || + (libsqlite3_sys_0_9_1.default or false); + libsqlite3_sys_0_9_1.pkg-config = + (f.libsqlite3_sys_0_9_1.pkg-config or false) || + (f.libsqlite3_sys_0_9_1.buildtime_bindgen or false) || + (libsqlite3_sys_0_9_1.buildtime_bindgen or false) || + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_6_11 or false) || + (libsqlite3_sys_0_9_1.min_sqlite_version_3_6_11 or false) || + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_6_23 or false) || + (libsqlite3_sys_0_9_1.min_sqlite_version_3_6_23 or false) || + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_6_8 or false) || + (libsqlite3_sys_0_9_1.min_sqlite_version_3_6_8 or false) || + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_7_16 or false) || + (libsqlite3_sys_0_9_1.min_sqlite_version_3_7_16 or false) || + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_7_3 or false) || + (libsqlite3_sys_0_9_1.min_sqlite_version_3_7_3 or false) || + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_7_4 or false) || + (libsqlite3_sys_0_9_1.min_sqlite_version_3_7_4 or false); + libsqlite3_sys_0_9_1.vcpkg = + (f.libsqlite3_sys_0_9_1.vcpkg or false) || + (f.libsqlite3_sys_0_9_1.buildtime_bindgen or false) || + (libsqlite3_sys_0_9_1.buildtime_bindgen or false) || + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_6_11 or false) || + (libsqlite3_sys_0_9_1.min_sqlite_version_3_6_11 or false) || + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_6_23 or false) || + (libsqlite3_sys_0_9_1.min_sqlite_version_3_6_23 or false) || + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_6_8 or false) || + (libsqlite3_sys_0_9_1.min_sqlite_version_3_6_8 or false) || + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_7_16 or false) || + (libsqlite3_sys_0_9_1.min_sqlite_version_3_7_16 or false) || + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_7_3 or false) || + (libsqlite3_sys_0_9_1.min_sqlite_version_3_7_3 or false) || + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_7_4 or false) || + (libsqlite3_sys_0_9_1.min_sqlite_version_3_7_4 or false); pkg_config_0_3_9.default = true; }) [ pkg_config_0_3_9_features ]; linked_hash_map_0_4_2 = { features?(linked_hash_map_0_4_2_features {}) }: linked_hash_map_0_4_2_ { @@ -955,13 +944,13 @@ rec { }) [ linked_hash_map_0_4_2_features ]; memchr_1_0_2 = { features?(memchr_1_0_2_features {}) }: memchr_1_0_2_ { dependencies = mapFeatures features ([ ] - ++ (if features.memchr_1_0_2.libc or false then [ libc_0_2_33 ] else [])); + ++ (if features.memchr_1_0_2.libc or false then [ libc_0_2_40 ] else [])); features = mkFeatures (features.memchr_1_0_2 or {}); }; memchr_1_0_2_features = f: updateFeatures f (rec { - libc_0_2_33.default = (f.libc_0_2_33.default or false); - libc_0_2_33.use_std = - (f.libc_0_2_33.use_std or false) || + libc_0_2_40.default = (f.libc_0_2_40.default or false); + libc_0_2_40.use_std = + (f.libc_0_2_40.use_std or false) || (memchr_1_0_2.use_std or false) || (f.memchr_1_0_2.use_std or false); memchr_1_0_2.default = (f.memchr_1_0_2.default or true); @@ -975,7 +964,30 @@ rec { (f.memchr_1_0_2.use_std or false) || (f.memchr_1_0_2.default or false) || (memchr_1_0_2.default or false); - }) [ libc_0_2_33_features ]; + }) [ libc_0_2_40_features ]; + memchr_2_0_1 = { features?(memchr_2_0_1_features {}) }: memchr_2_0_1_ { + dependencies = mapFeatures features ([ ] + ++ (if features.memchr_2_0_1.libc or false then [ libc_0_2_40 ] else [])); + features = mkFeatures (features.memchr_2_0_1 or {}); + }; + memchr_2_0_1_features = f: updateFeatures f (rec { + libc_0_2_40.default = (f.libc_0_2_40.default or false); + libc_0_2_40.use_std = + (f.libc_0_2_40.use_std or false) || + (memchr_2_0_1.use_std or false) || + (f.memchr_2_0_1.use_std or false); + memchr_2_0_1.default = (f.memchr_2_0_1.default or true); + memchr_2_0_1.libc = + (f.memchr_2_0_1.libc or false) || + (f.memchr_2_0_1.default or false) || + (memchr_2_0_1.default or false) || + (f.memchr_2_0_1.use_std or false) || + (memchr_2_0_1.use_std or false); + memchr_2_0_1.use_std = + (f.memchr_2_0_1.use_std or false) || + (f.memchr_2_0_1.default or false) || + (memchr_2_0_1.default or false); + }) [ libc_0_2_40_features ]; nom_3_2_1 = { features?(nom_3_2_1_features {}) }: nom_3_2_1_ { dependencies = mapFeatures features ([ memchr_1_0_2 ]); features = mkFeatures (features.nom_3_2_1 or {}); @@ -1012,282 +1024,303 @@ rec { (f.nom_3_2_1.default or false) || (nom_3_2_1.default or false); }) [ memchr_1_0_2_features ]; - num_0_1_40 = { features?(num_0_1_40_features {}) }: num_0_1_40_ { - dependencies = mapFeatures features ([ num_integer_0_1_35 num_iter_0_1_34 num_traits_0_1_40 ]); - features = mkFeatures (features.num_0_1_40 or {}); - }; - num_0_1_40_features = f: updateFeatures f (rec { - num_0_1_40.bigint = - (f.num_0_1_40.bigint or false) || - (f.num_0_1_40.default or false) || - (num_0_1_40.default or false); - num_0_1_40.complex = - (f.num_0_1_40.complex or false) || - (f.num_0_1_40.default or false) || - (num_0_1_40.default or false); - num_0_1_40.default = (f.num_0_1_40.default or true); - num_0_1_40.num-bigint = - (f.num_0_1_40.num-bigint or false) || - (f.num_0_1_40.bigint or false) || - (num_0_1_40.bigint or false); - num_0_1_40.num-complex = - (f.num_0_1_40.num-complex or false) || - (f.num_0_1_40.complex or false) || - (num_0_1_40.complex or false); - num_0_1_40.num-rational = - (f.num_0_1_40.num-rational or false) || - (f.num_0_1_40.rational or false) || - (num_0_1_40.rational or false); - num_0_1_40.rational = - (f.num_0_1_40.rational or false) || - (f.num_0_1_40.default or false) || - (num_0_1_40.default or false); - num_0_1_40.rustc-serialize = - (f.num_0_1_40.rustc-serialize or false) || - (f.num_0_1_40.default or false) || - (num_0_1_40.default or false); - num_integer_0_1_35.default = true; - num_iter_0_1_34.default = true; - num_traits_0_1_40.default = true; - }) [ num_integer_0_1_35_features num_iter_0_1_34_features num_traits_0_1_40_features ]; - num_integer_0_1_35 = { features?(num_integer_0_1_35_features {}) }: num_integer_0_1_35_ { - dependencies = mapFeatures features ([ num_traits_0_1_40 ]); - }; - num_integer_0_1_35_features = f: updateFeatures f (rec { - num_integer_0_1_35.default = (f.num_integer_0_1_35.default or true); - num_traits_0_1_40.default = true; - }) [ num_traits_0_1_40_features ]; - num_iter_0_1_34 = { features?(num_iter_0_1_34_features {}) }: num_iter_0_1_34_ { - dependencies = mapFeatures features ([ num_integer_0_1_35 num_traits_0_1_40 ]); - }; - num_iter_0_1_34_features = f: updateFeatures f (rec { - num_integer_0_1_35.default = true; - num_iter_0_1_34.default = (f.num_iter_0_1_34.default or true); - num_traits_0_1_40.default = true; - }) [ num_integer_0_1_35_features num_traits_0_1_40_features ]; - num_traits_0_1_40 = { features?(num_traits_0_1_40_features {}) }: num_traits_0_1_40_ {}; - num_traits_0_1_40_features = f: updateFeatures f (rec { - num_traits_0_1_40.default = (f.num_traits_0_1_40.default or true); + num_traits_0_2_2 = { features?(num_traits_0_2_2_features {}) }: num_traits_0_2_2_ { + features = mkFeatures (features.num_traits_0_2_2 or {}); + }; + num_traits_0_2_2_features = f: updateFeatures f (rec { + num_traits_0_2_2.default = (f.num_traits_0_2_2.default or true); + num_traits_0_2_2.std = + (f.num_traits_0_2_2.std or false) || + (f.num_traits_0_2_2.default or false) || + (num_traits_0_2_2.default or false); }) []; pkg_config_0_3_9 = { features?(pkg_config_0_3_9_features {}) }: pkg_config_0_3_9_ {}; pkg_config_0_3_9_features = f: updateFeatures f (rec { pkg_config_0_3_9.default = (f.pkg_config_0_3_9.default or true); }) []; - quote_0_3_15 = { features?(quote_0_3_15_features {}) }: quote_0_3_15_ {}; - quote_0_3_15_features = f: updateFeatures f (rec { - quote_0_3_15.default = (f.quote_0_3_15.default or true); + proc_macro2_0_3_6 = { features?(proc_macro2_0_3_6_features {}) }: proc_macro2_0_3_6_ { + dependencies = mapFeatures features ([ unicode_xid_0_1_0 ]); + features = mkFeatures (features.proc_macro2_0_3_6 or {}); + }; + proc_macro2_0_3_6_features = f: updateFeatures f (rec { + proc_macro2_0_3_6.default = (f.proc_macro2_0_3_6.default or true); + proc_macro2_0_3_6.proc-macro = + (f.proc_macro2_0_3_6.proc-macro or false) || + (f.proc_macro2_0_3_6.default or false) || + (proc_macro2_0_3_6.default or false) || + (f.proc_macro2_0_3_6.nightly or false) || + (proc_macro2_0_3_6.nightly or false); + unicode_xid_0_1_0.default = true; + }) [ unicode_xid_0_1_0_features ]; + quick_error_1_2_1 = { features?(quick_error_1_2_1_features {}) }: quick_error_1_2_1_ {}; + quick_error_1_2_1_features = f: updateFeatures f (rec { + quick_error_1_2_1.default = (f.quick_error_1_2_1.default or true); }) []; - rand_0_3_18 = { features?(rand_0_3_18_features {}) }: rand_0_3_18_ { - dependencies = mapFeatures features ([ libc_0_2_33 ]) - ++ (if kernel == "fuchsia" then mapFeatures features ([ fuchsia_zircon_0_2_1 ]) else []); - features = mkFeatures (features.rand_0_3_18 or {}); - }; - rand_0_3_18_features = f: updateFeatures f (rec { - fuchsia_zircon_0_2_1.default = true; - libc_0_2_33.default = true; - rand_0_3_18.default = (f.rand_0_3_18.default or true); - rand_0_3_18.i128_support = - (f.rand_0_3_18.i128_support or false) || - (f.rand_0_3_18.nightly or false) || - (rand_0_3_18.nightly or false); - }) [ libc_0_2_33_features fuchsia_zircon_0_2_1_features ]; - redox_syscall_0_1_32 = { features?(redox_syscall_0_1_32_features {}) }: redox_syscall_0_1_32_ {}; - redox_syscall_0_1_32_features = f: updateFeatures f (rec { - redox_syscall_0_1_32.default = (f.redox_syscall_0_1_32.default or true); + quote_0_5_1 = { features?(quote_0_5_1_features {}) }: quote_0_5_1_ { + dependencies = mapFeatures features ([ proc_macro2_0_3_6 ]); + features = mkFeatures (features.quote_0_5_1 or {}); + }; + quote_0_5_1_features = f: updateFeatures f (rec { + proc_macro2_0_3_6.default = (f.proc_macro2_0_3_6.default or false); + proc_macro2_0_3_6.proc-macro = + (f.proc_macro2_0_3_6.proc-macro or false) || + (quote_0_5_1.proc-macro or false) || + (f.quote_0_5_1.proc-macro or false); + quote_0_5_1.default = (f.quote_0_5_1.default or true); + quote_0_5_1.proc-macro = + (f.quote_0_5_1.proc-macro or false) || + (f.quote_0_5_1.default or false) || + (quote_0_5_1.default or false); + }) [ proc_macro2_0_3_6_features ]; + rand_0_4_2 = { features?(rand_0_4_2_features {}) }: rand_0_4_2_ { + dependencies = (if kernel == "fuchsia" then mapFeatures features ([ fuchsia_zircon_0_3_3 ]) else []) + ++ (if (kernel == "linux" || kernel == "darwin") then mapFeatures features ([ ] + ++ (if features.rand_0_4_2.libc or false then [ libc_0_2_40 ] else [])) else []) + ++ (if kernel == "windows" then mapFeatures features ([ winapi_0_3_4 ]) else []); + features = mkFeatures (features.rand_0_4_2 or {}); + }; + rand_0_4_2_features = f: updateFeatures f (rec { + fuchsia_zircon_0_3_3.default = true; + libc_0_2_40.default = true; + rand_0_4_2.default = (f.rand_0_4_2.default or true); + rand_0_4_2.i128_support = + (f.rand_0_4_2.i128_support or false) || + (f.rand_0_4_2.nightly or false) || + (rand_0_4_2.nightly or false); + rand_0_4_2.libc = + (f.rand_0_4_2.libc or false) || + (f.rand_0_4_2.std or false) || + (rand_0_4_2.std or false); + rand_0_4_2.std = + (f.rand_0_4_2.std or false) || + (f.rand_0_4_2.default or false) || + (rand_0_4_2.default or false); + winapi_0_3_4.default = true; + winapi_0_3_4.minwindef = true; + winapi_0_3_4.ntsecapi = true; + winapi_0_3_4.profileapi = true; + winapi_0_3_4.winnt = true; + }) [ fuchsia_zircon_0_3_3_features libc_0_2_40_features winapi_0_3_4_features ]; + redox_syscall_0_1_37 = { features?(redox_syscall_0_1_37_features {}) }: redox_syscall_0_1_37_ {}; + redox_syscall_0_1_37_features = f: updateFeatures f (rec { + redox_syscall_0_1_37.default = (f.redox_syscall_0_1_37.default or true); }) []; redox_termios_0_1_1 = { features?(redox_termios_0_1_1_features {}) }: redox_termios_0_1_1_ { - dependencies = mapFeatures features ([ redox_syscall_0_1_32 ]); + dependencies = mapFeatures features ([ redox_syscall_0_1_37 ]); }; redox_termios_0_1_1_features = f: updateFeatures f (rec { - redox_syscall_0_1_32.default = true; + redox_syscall_0_1_37.default = true; redox_termios_0_1_1.default = (f.redox_termios_0_1_1.default or true); - }) [ redox_syscall_0_1_32_features ]; - regex_0_2_2 = { features?(regex_0_2_2_features {}) }: regex_0_2_2_ { - dependencies = mapFeatures features ([ aho_corasick_0_6_3 memchr_1_0_2 regex_syntax_0_4_1 thread_local_0_3_4 utf8_ranges_1_0_0 ]); - features = mkFeatures (features.regex_0_2_2 or {}); - }; - regex_0_2_2_features = f: updateFeatures f (rec { - aho_corasick_0_6_3.default = true; - memchr_1_0_2.default = true; - regex_0_2_2.default = (f.regex_0_2_2.default or true); - regex_0_2_2.simd = - (f.regex_0_2_2.simd or false) || - (f.regex_0_2_2.simd-accel or false) || - (regex_0_2_2.simd-accel or false); - regex_syntax_0_4_1.default = true; - thread_local_0_3_4.default = true; + }) [ redox_syscall_0_1_37_features ]; + regex_0_2_10 = { features?(regex_0_2_10_features {}) }: regex_0_2_10_ { + dependencies = mapFeatures features ([ aho_corasick_0_6_4 memchr_2_0_1 regex_syntax_0_5_5 thread_local_0_3_5 utf8_ranges_1_0_0 ]); + features = mkFeatures (features.regex_0_2_10 or {}); + }; + regex_0_2_10_features = f: updateFeatures f (rec { + aho_corasick_0_6_4.default = true; + memchr_2_0_1.default = true; + regex_0_2_10.default = (f.regex_0_2_10.default or true); + regex_0_2_10.pattern = + (f.regex_0_2_10.pattern or false) || + (f.regex_0_2_10.unstable or false) || + (regex_0_2_10.unstable or false); + regex_syntax_0_5_5.default = true; + thread_local_0_3_5.default = true; utf8_ranges_1_0_0.default = true; - }) [ aho_corasick_0_6_3_features memchr_1_0_2_features regex_syntax_0_4_1_features thread_local_0_3_4_features utf8_ranges_1_0_0_features ]; - regex_syntax_0_4_1 = { features?(regex_syntax_0_4_1_features {}) }: regex_syntax_0_4_1_ {}; - regex_syntax_0_4_1_features = f: updateFeatures f (rec { - regex_syntax_0_4_1.default = (f.regex_syntax_0_4_1.default or true); - }) []; + }) [ aho_corasick_0_6_4_features memchr_2_0_1_features regex_syntax_0_5_5_features thread_local_0_3_5_features utf8_ranges_1_0_0_features ]; + regex_syntax_0_5_5 = { features?(regex_syntax_0_5_5_features {}) }: regex_syntax_0_5_5_ { + dependencies = mapFeatures features ([ ucd_util_0_1_1 ]); + }; + regex_syntax_0_5_5_features = f: updateFeatures f (rec { + regex_syntax_0_5_5.default = (f.regex_syntax_0_5_5.default or true); + ucd_util_0_1_1.default = true; + }) [ ucd_util_0_1_1_features ]; + remove_dir_all_0_5_0 = { features?(remove_dir_all_0_5_0_features {}) }: remove_dir_all_0_5_0_ { + dependencies = (if kernel == "windows" then mapFeatures features ([ winapi_0_3_4 ]) else []); + }; + remove_dir_all_0_5_0_features = f: updateFeatures f (rec { + remove_dir_all_0_5_0.default = (f.remove_dir_all_0_5_0.default or true); + winapi_0_3_4.default = true; + winapi_0_3_4.errhandlingapi = true; + winapi_0_3_4.fileapi = true; + winapi_0_3_4.std = true; + winapi_0_3_4.winbase = true; + winapi_0_3_4.winerror = true; + }) [ winapi_0_3_4_features ]; rusqlite_0_13_0 = { features?(rusqlite_0_13_0_features {}) }: rusqlite_0_13_0_ { - dependencies = mapFeatures features ([ bitflags_1_0_1 libsqlite3_sys_0_9_0 lru_cache_0_1_1 time_0_1_38 ]); + dependencies = mapFeatures features ([ bitflags_1_0_1 libsqlite3_sys_0_9_1 lru_cache_0_1_1 time_0_1_39 ]); features = mkFeatures (features.rusqlite_0_13_0 or {}); }; rusqlite_0_13_0_features = f: updateFeatures f (rec { bitflags_1_0_1.default = true; - libsqlite3_sys_0_9_0.buildtime_bindgen = - (f.libsqlite3_sys_0_9_0.buildtime_bindgen or false) || + libsqlite3_sys_0_9_1.buildtime_bindgen = + (f.libsqlite3_sys_0_9_1.buildtime_bindgen or false) || (rusqlite_0_13_0.buildtime_bindgen or false) || (f.rusqlite_0_13_0.buildtime_bindgen or false); - libsqlite3_sys_0_9_0.bundled = - (f.libsqlite3_sys_0_9_0.bundled or false) || + libsqlite3_sys_0_9_1.bundled = + (f.libsqlite3_sys_0_9_1.bundled or false) || (rusqlite_0_13_0.bundled or false) || (f.rusqlite_0_13_0.bundled or false); - libsqlite3_sys_0_9_0.default = true; - libsqlite3_sys_0_9_0.min_sqlite_version_3_6_11 = - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_6_11 or false) || + libsqlite3_sys_0_9_1.default = true; + libsqlite3_sys_0_9_1.min_sqlite_version_3_6_11 = + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_6_11 or false) || (rusqlite_0_13_0.backup or false) || (f.rusqlite_0_13_0.backup or false); - libsqlite3_sys_0_9_0.min_sqlite_version_3_6_23 = - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_6_23 or false) || + libsqlite3_sys_0_9_1.min_sqlite_version_3_6_23 = + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_6_23 or false) || (rusqlite_0_13_0.trace or false) || (f.rusqlite_0_13_0.trace or false); - libsqlite3_sys_0_9_0.min_sqlite_version_3_7_3 = - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_7_3 or false) || + libsqlite3_sys_0_9_1.min_sqlite_version_3_7_3 = + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_7_3 or false) || (rusqlite_0_13_0.functions or false) || (f.rusqlite_0_13_0.functions or false); - libsqlite3_sys_0_9_0.min_sqlite_version_3_7_4 = - (f.libsqlite3_sys_0_9_0.min_sqlite_version_3_7_4 or false) || + libsqlite3_sys_0_9_1.min_sqlite_version_3_7_4 = + (f.libsqlite3_sys_0_9_1.min_sqlite_version_3_7_4 or false) || (rusqlite_0_13_0.blob or false) || (f.rusqlite_0_13_0.blob or false); - libsqlite3_sys_0_9_0.sqlcipher = - (f.libsqlite3_sys_0_9_0.sqlcipher or false) || + libsqlite3_sys_0_9_1.sqlcipher = + (f.libsqlite3_sys_0_9_1.sqlcipher or false) || (rusqlite_0_13_0.sqlcipher or false) || (f.rusqlite_0_13_0.sqlcipher or false); lru_cache_0_1_1.default = true; rusqlite_0_13_0.default = (f.rusqlite_0_13_0.default or true); - time_0_1_38.default = true; - }) [ bitflags_1_0_1_features libsqlite3_sys_0_9_0_features lru_cache_0_1_1_features time_0_1_38_features ]; - rustc_demangle_0_1_5 = { features?(rustc_demangle_0_1_5_features {}) }: rustc_demangle_0_1_5_ {}; - rustc_demangle_0_1_5_features = f: updateFeatures f (rec { - rustc_demangle_0_1_5.default = (f.rustc_demangle_0_1_5.default or true); + time_0_1_39.default = true; + }) [ bitflags_1_0_1_features libsqlite3_sys_0_9_1_features lru_cache_0_1_1_features time_0_1_39_features ]; + rustc_demangle_0_1_7 = { features?(rustc_demangle_0_1_7_features {}) }: rustc_demangle_0_1_7_ {}; + rustc_demangle_0_1_7_features = f: updateFeatures f (rec { + rustc_demangle_0_1_7.default = (f.rustc_demangle_0_1_7.default or true); }) []; - serde_1_0_21 = { features?(serde_1_0_21_features {}) }: serde_1_0_21_ { + serde_1_0_38 = { features?(serde_1_0_38_features {}) }: serde_1_0_38_ { dependencies = mapFeatures features ([]); - features = mkFeatures (features.serde_1_0_21 or {}); - }; - serde_1_0_21_features = f: updateFeatures f (rec { - serde_1_0_21.default = (f.serde_1_0_21.default or true); - serde_1_0_21.serde_derive = - (f.serde_1_0_21.serde_derive or false) || - (f.serde_1_0_21.derive or false) || - (serde_1_0_21.derive or false) || - (f.serde_1_0_21.playground or false) || - (serde_1_0_21.playground or false); - serde_1_0_21.std = - (f.serde_1_0_21.std or false) || - (f.serde_1_0_21.default or false) || - (serde_1_0_21.default or false); - serde_1_0_21.unstable = - (f.serde_1_0_21.unstable or false) || - (f.serde_1_0_21.alloc or false) || - (serde_1_0_21.alloc or false); + features = mkFeatures (features.serde_1_0_38 or {}); + }; + serde_1_0_38_features = f: updateFeatures f (rec { + serde_1_0_38.default = (f.serde_1_0_38.default or true); + serde_1_0_38.serde_derive = + (f.serde_1_0_38.serde_derive or false) || + (f.serde_1_0_38.derive or false) || + (serde_1_0_38.derive or false) || + (f.serde_1_0_38.playground or false) || + (serde_1_0_38.playground or false); + serde_1_0_38.std = + (f.serde_1_0_38.std or false) || + (f.serde_1_0_38.default or false) || + (serde_1_0_38.default or false); + serde_1_0_38.unstable = + (f.serde_1_0_38.unstable or false) || + (f.serde_1_0_38.alloc or false) || + (serde_1_0_38.alloc or false); }) []; - serde_derive_1_0_21 = { features?(serde_derive_1_0_21_features {}) }: serde_derive_1_0_21_ { - dependencies = mapFeatures features ([ quote_0_3_15 serde_derive_internals_0_17_0 syn_0_11_11 ]); - }; - serde_derive_1_0_21_features = f: updateFeatures f (rec { - quote_0_3_15.default = true; - serde_derive_1_0_21.default = (f.serde_derive_1_0_21.default or true); - serde_derive_internals_0_17_0.default = (f.serde_derive_internals_0_17_0.default or false); - syn_0_11_11.default = true; - syn_0_11_11.visit = true; - }) [ quote_0_3_15_features serde_derive_internals_0_17_0_features syn_0_11_11_features ]; - serde_derive_internals_0_17_0 = { features?(serde_derive_internals_0_17_0_features {}) }: serde_derive_internals_0_17_0_ { - dependencies = mapFeatures features ([ syn_0_11_11 synom_0_11_3 ]); - }; - serde_derive_internals_0_17_0_features = f: updateFeatures f (rec { - serde_derive_internals_0_17_0.default = (f.serde_derive_internals_0_17_0.default or true); - syn_0_11_11.default = (f.syn_0_11_11.default or false); - syn_0_11_11.parsing = true; - synom_0_11_3.default = true; - }) [ syn_0_11_11_features synom_0_11_3_features ]; - serde_json_1_0_6 = { features?(serde_json_1_0_6_features {}) }: serde_json_1_0_6_ { - dependencies = mapFeatures features ([ dtoa_0_4_2 itoa_0_3_4 num_traits_0_1_40 serde_1_0_21 ]); - features = mkFeatures (features.serde_json_1_0_6 or {}); - }; - serde_json_1_0_6_features = f: updateFeatures f (rec { + serde_derive_1_0_38 = { features?(serde_derive_1_0_38_features {}) }: serde_derive_1_0_38_ { + dependencies = mapFeatures features ([ proc_macro2_0_3_6 quote_0_5_1 serde_derive_internals_0_23_1 syn_0_13_1 ]); + features = mkFeatures (features.serde_derive_1_0_38 or {}); + }; + serde_derive_1_0_38_features = f: updateFeatures f (rec { + proc_macro2_0_3_6.default = true; + quote_0_5_1.default = true; + serde_derive_1_0_38.default = (f.serde_derive_1_0_38.default or true); + serde_derive_internals_0_23_1.default = (f.serde_derive_internals_0_23_1.default or false); + syn_0_13_1.default = true; + syn_0_13_1.visit = true; + }) [ proc_macro2_0_3_6_features quote_0_5_1_features serde_derive_internals_0_23_1_features syn_0_13_1_features ]; + serde_derive_internals_0_23_1 = { features?(serde_derive_internals_0_23_1_features {}) }: serde_derive_internals_0_23_1_ { + dependencies = mapFeatures features ([ proc_macro2_0_3_6 syn_0_13_1 ]); + }; + serde_derive_internals_0_23_1_features = f: updateFeatures f (rec { + proc_macro2_0_3_6.default = true; + serde_derive_internals_0_23_1.default = (f.serde_derive_internals_0_23_1.default or true); + syn_0_13_1.clone-impls = true; + syn_0_13_1.default = (f.syn_0_13_1.default or false); + syn_0_13_1.derive = true; + syn_0_13_1.parsing = true; + }) [ proc_macro2_0_3_6_features syn_0_13_1_features ]; + serde_json_1_0_14 = { features?(serde_json_1_0_14_features {}) }: serde_json_1_0_14_ { + dependencies = mapFeatures features ([ dtoa_0_4_2 itoa_0_4_1 num_traits_0_2_2 serde_1_0_38 ]); + features = mkFeatures (features.serde_json_1_0_14 or {}); + }; + serde_json_1_0_14_features = f: updateFeatures f (rec { dtoa_0_4_2.default = true; - itoa_0_3_4.default = true; - num_traits_0_1_40.default = true; - serde_1_0_21.default = true; - serde_json_1_0_6.default = (f.serde_json_1_0_6.default or true); - serde_json_1_0_6.linked-hash-map = - (f.serde_json_1_0_6.linked-hash-map or false) || - (f.serde_json_1_0_6.preserve_order or false) || - (serde_json_1_0_6.preserve_order or false); - }) [ dtoa_0_4_2_features itoa_0_3_4_features num_traits_0_1_40_features serde_1_0_21_features ]; - strsim_0_6_0 = { features?(strsim_0_6_0_features {}) }: strsim_0_6_0_ {}; - strsim_0_6_0_features = f: updateFeatures f (rec { - strsim_0_6_0.default = (f.strsim_0_6_0.default or true); + itoa_0_4_1.default = true; + num_traits_0_2_2.default = (f.num_traits_0_2_2.default or false); + serde_1_0_38.default = true; + serde_json_1_0_14.default = (f.serde_json_1_0_14.default or true); + serde_json_1_0_14.linked-hash-map = + (f.serde_json_1_0_14.linked-hash-map or false) || + (f.serde_json_1_0_14.preserve_order or false) || + (serde_json_1_0_14.preserve_order or false); + }) [ dtoa_0_4_2_features itoa_0_4_1_features num_traits_0_2_2_features serde_1_0_38_features ]; + strsim_0_7_0 = { features?(strsim_0_7_0_features {}) }: strsim_0_7_0_ {}; + strsim_0_7_0_features = f: updateFeatures f (rec { + strsim_0_7_0.default = (f.strsim_0_7_0.default or true); }) []; - syn_0_11_11 = { features?(syn_0_11_11_features {}) }: syn_0_11_11_ { - dependencies = mapFeatures features ([ ] - ++ (if features.syn_0_11_11.quote or false then [ quote_0_3_15 ] else []) - ++ (if features.syn_0_11_11.synom or false then [ synom_0_11_3 ] else []) - ++ (if features.syn_0_11_11.unicode-xid or false then [ unicode_xid_0_0_4 ] else [])); - features = mkFeatures (features.syn_0_11_11 or {}); - }; - syn_0_11_11_features = f: updateFeatures f (rec { - quote_0_3_15.default = true; - syn_0_11_11.default = (f.syn_0_11_11.default or true); - syn_0_11_11.parsing = - (f.syn_0_11_11.parsing or false) || - (f.syn_0_11_11.default or false) || - (syn_0_11_11.default or false); - syn_0_11_11.printing = - (f.syn_0_11_11.printing or false) || - (f.syn_0_11_11.default or false) || - (syn_0_11_11.default or false); - syn_0_11_11.quote = - (f.syn_0_11_11.quote or false) || - (f.syn_0_11_11.printing or false) || - (syn_0_11_11.printing or false); - syn_0_11_11.synom = - (f.syn_0_11_11.synom or false) || - (f.syn_0_11_11.parsing or false) || - (syn_0_11_11.parsing or false); - syn_0_11_11.unicode-xid = - (f.syn_0_11_11.unicode-xid or false) || - (f.syn_0_11_11.parsing or false) || - (syn_0_11_11.parsing or false); - synom_0_11_3.default = true; - unicode_xid_0_0_4.default = true; - }) [ quote_0_3_15_features synom_0_11_3_features unicode_xid_0_0_4_features ]; - synom_0_11_3 = { features?(synom_0_11_3_features {}) }: synom_0_11_3_ { - dependencies = mapFeatures features ([ unicode_xid_0_0_4 ]); - }; - synom_0_11_3_features = f: updateFeatures f (rec { - synom_0_11_3.default = (f.synom_0_11_3.default or true); - unicode_xid_0_0_4.default = true; - }) [ unicode_xid_0_0_4_features ]; - tempdir_0_3_5 = { features?(tempdir_0_3_5_features {}) }: tempdir_0_3_5_ { - dependencies = mapFeatures features ([ rand_0_3_18 ]); - }; - tempdir_0_3_5_features = f: updateFeatures f (rec { - rand_0_3_18.default = true; - tempdir_0_3_5.default = (f.tempdir_0_3_5.default or true); - }) [ rand_0_3_18_features ]; - termcolor_0_3_3 = { features?(termcolor_0_3_3_features {}) }: termcolor_0_3_3_ { - dependencies = (if kernel == "windows" then mapFeatures features ([ wincolor_0_1_4 ]) else []); - }; - termcolor_0_3_3_features = f: updateFeatures f (rec { - termcolor_0_3_3.default = (f.termcolor_0_3_3.default or true); - wincolor_0_1_4.default = true; - }) [ wincolor_0_1_4_features ]; + syn_0_13_1 = { features?(syn_0_13_1_features {}) }: syn_0_13_1_ { + dependencies = mapFeatures features ([ proc_macro2_0_3_6 unicode_xid_0_1_0 ] + ++ (if features.syn_0_13_1.quote or false then [ quote_0_5_1 ] else [])); + features = mkFeatures (features.syn_0_13_1 or {}); + }; + syn_0_13_1_features = f: updateFeatures f (rec { + proc_macro2_0_3_6.default = (f.proc_macro2_0_3_6.default or false); + proc_macro2_0_3_6.proc-macro = + (f.proc_macro2_0_3_6.proc-macro or false) || + (syn_0_13_1.proc-macro or false) || + (f.syn_0_13_1.proc-macro or false); + quote_0_5_1.default = (f.quote_0_5_1.default or false); + quote_0_5_1.proc-macro = + (f.quote_0_5_1.proc-macro or false) || + (syn_0_13_1.proc-macro or false) || + (f.syn_0_13_1.proc-macro or false); + syn_0_13_1.clone-impls = + (f.syn_0_13_1.clone-impls or false) || + (f.syn_0_13_1.default or false) || + (syn_0_13_1.default or false); + syn_0_13_1.default = (f.syn_0_13_1.default or true); + syn_0_13_1.derive = + (f.syn_0_13_1.derive or false) || + (f.syn_0_13_1.default or false) || + (syn_0_13_1.default or false); + syn_0_13_1.parsing = + (f.syn_0_13_1.parsing or false) || + (f.syn_0_13_1.default or false) || + (syn_0_13_1.default or false); + syn_0_13_1.printing = + (f.syn_0_13_1.printing or false) || + (f.syn_0_13_1.default or false) || + (syn_0_13_1.default or false); + syn_0_13_1.proc-macro = + (f.syn_0_13_1.proc-macro or false) || + (f.syn_0_13_1.default or false) || + (syn_0_13_1.default or false); + syn_0_13_1.quote = + (f.syn_0_13_1.quote or false) || + (f.syn_0_13_1.printing or false) || + (syn_0_13_1.printing or false); + unicode_xid_0_1_0.default = true; + }) [ proc_macro2_0_3_6_features quote_0_5_1_features unicode_xid_0_1_0_features ]; + tempdir_0_3_7 = { features?(tempdir_0_3_7_features {}) }: tempdir_0_3_7_ { + dependencies = mapFeatures features ([ rand_0_4_2 remove_dir_all_0_5_0 ]); + }; + tempdir_0_3_7_features = f: updateFeatures f (rec { + rand_0_4_2.default = true; + remove_dir_all_0_5_0.default = true; + tempdir_0_3_7.default = (f.tempdir_0_3_7.default or true); + }) [ rand_0_4_2_features remove_dir_all_0_5_0_features ]; + termcolor_0_3_6 = { features?(termcolor_0_3_6_features {}) }: termcolor_0_3_6_ { + dependencies = (if kernel == "windows" then mapFeatures features ([ wincolor_0_1_6 ]) else []); + }; + termcolor_0_3_6_features = f: updateFeatures f (rec { + termcolor_0_3_6.default = (f.termcolor_0_3_6.default or true); + wincolor_0_1_6.default = true; + }) [ wincolor_0_1_6_features ]; termion_1_5_1 = { features?(termion_1_5_1_features {}) }: termion_1_5_1_ { - dependencies = (if !(kernel == "redox") then mapFeatures features ([ libc_0_2_33 ]) else []) - ++ (if kernel == "redox" then mapFeatures features ([ redox_syscall_0_1_32 redox_termios_0_1_1 ]) else []); + dependencies = (if !(kernel == "redox") then mapFeatures features ([ libc_0_2_40 ]) else []) + ++ (if kernel == "redox" then mapFeatures features ([ redox_syscall_0_1_37 redox_termios_0_1_1 ]) else []); }; termion_1_5_1_features = f: updateFeatures f (rec { - libc_0_2_33.default = true; - redox_syscall_0_1_32.default = true; + libc_0_2_40.default = true; + redox_syscall_0_1_37.default = true; redox_termios_0_1_1.default = true; termion_1_5_1.default = (f.termion_1_5_1.default or true); - }) [ libc_0_2_33_features redox_syscall_0_1_32_features redox_termios_0_1_1_features ]; + }) [ libc_0_2_40_features redox_syscall_0_1_37_features redox_termios_0_1_1_features ]; textwrap_0_9_0 = { features?(textwrap_0_9_0_features {}) }: textwrap_0_9_0_ { dependencies = mapFeatures features ([ unicode_width_0_1_4 ]); }; @@ -1295,44 +1328,54 @@ rec { textwrap_0_9_0.default = (f.textwrap_0_9_0.default or true); unicode_width_0_1_4.default = true; }) [ unicode_width_0_1_4_features ]; - thread_local_0_3_4 = { features?(thread_local_0_3_4_features {}) }: thread_local_0_3_4_ { - dependencies = mapFeatures features ([ lazy_static_0_2_11 unreachable_1_0_0 ]); + thread_local_0_3_5 = { features?(thread_local_0_3_5_features {}) }: thread_local_0_3_5_ { + dependencies = mapFeatures features ([ lazy_static_1_0_0 unreachable_1_0_0 ]); }; - thread_local_0_3_4_features = f: updateFeatures f (rec { - lazy_static_0_2_11.default = true; - thread_local_0_3_4.default = (f.thread_local_0_3_4.default or true); + thread_local_0_3_5_features = f: updateFeatures f (rec { + lazy_static_1_0_0.default = true; + thread_local_0_3_5.default = (f.thread_local_0_3_5.default or true); unreachable_1_0_0.default = true; - }) [ lazy_static_0_2_11_features unreachable_1_0_0_features ]; - time_0_1_38 = { features?(time_0_1_38_features {}) }: time_0_1_38_ { - dependencies = mapFeatures features ([ libc_0_2_33 ]) - ++ (if kernel == "redox" then mapFeatures features ([ redox_syscall_0_1_32 ]) else []) - ++ (if kernel == "windows" then mapFeatures features ([ kernel32_sys_0_2_2 winapi_0_2_8 ]) else []); - }; - time_0_1_38_features = f: updateFeatures f (rec { - kernel32_sys_0_2_2.default = true; - libc_0_2_33.default = true; - redox_syscall_0_1_32.default = true; - time_0_1_38.default = (f.time_0_1_38.default or true); - winapi_0_2_8.default = true; - }) [ libc_0_2_33_features redox_syscall_0_1_32_features kernel32_sys_0_2_2_features winapi_0_2_8_features ]; - toml_0_4_5 = { features?(toml_0_4_5_features {}) }: toml_0_4_5_ { - dependencies = mapFeatures features ([ serde_1_0_21 ]); - }; - toml_0_4_5_features = f: updateFeatures f (rec { - serde_1_0_21.default = true; - toml_0_4_5.default = (f.toml_0_4_5.default or true); - }) [ serde_1_0_21_features ]; + }) [ lazy_static_1_0_0_features unreachable_1_0_0_features ]; + time_0_1_39 = { features?(time_0_1_39_features {}) }: time_0_1_39_ { + dependencies = mapFeatures features ([ libc_0_2_40 ]) + ++ (if kernel == "redox" then mapFeatures features ([ redox_syscall_0_1_37 ]) else []) + ++ (if kernel == "windows" then mapFeatures features ([ winapi_0_3_4 ]) else []); + }; + time_0_1_39_features = f: updateFeatures f (rec { + libc_0_2_40.default = true; + redox_syscall_0_1_37.default = true; + time_0_1_39.default = (f.time_0_1_39.default or true); + winapi_0_3_4.default = true; + winapi_0_3_4.minwinbase = true; + winapi_0_3_4.minwindef = true; + winapi_0_3_4.ntdef = true; + winapi_0_3_4.profileapi = true; + winapi_0_3_4.std = true; + winapi_0_3_4.sysinfoapi = true; + winapi_0_3_4.timezoneapi = true; + }) [ libc_0_2_40_features redox_syscall_0_1_37_features winapi_0_3_4_features ]; + toml_0_4_6 = { features?(toml_0_4_6_features {}) }: toml_0_4_6_ { + dependencies = mapFeatures features ([ serde_1_0_38 ]); + }; + toml_0_4_6_features = f: updateFeatures f (rec { + serde_1_0_38.default = true; + toml_0_4_6.default = (f.toml_0_4_6.default or true); + }) [ serde_1_0_38_features ]; + ucd_util_0_1_1 = { features?(ucd_util_0_1_1_features {}) }: ucd_util_0_1_1_ {}; + ucd_util_0_1_1_features = f: updateFeatures f (rec { + ucd_util_0_1_1.default = (f.ucd_util_0_1_1.default or true); + }) []; unicode_width_0_1_4 = { features?(unicode_width_0_1_4_features {}) }: unicode_width_0_1_4_ { features = mkFeatures (features.unicode_width_0_1_4 or {}); }; unicode_width_0_1_4_features = f: updateFeatures f (rec { unicode_width_0_1_4.default = (f.unicode_width_0_1_4.default or true); }) []; - unicode_xid_0_0_4 = { features?(unicode_xid_0_0_4_features {}) }: unicode_xid_0_0_4_ { - features = mkFeatures (features.unicode_xid_0_0_4 or {}); + unicode_xid_0_1_0 = { features?(unicode_xid_0_1_0_features {}) }: unicode_xid_0_1_0_ { + features = mkFeatures (features.unicode_xid_0_1_0 or {}); }; - unicode_xid_0_0_4_features = f: updateFeatures f (rec { - unicode_xid_0_0_4.default = (f.unicode_xid_0_0_4.default or true); + unicode_xid_0_1_0_features = f: updateFeatures f (rec { + unicode_xid_0_1_0.default = (f.unicode_xid_0_1_0.default or true); }) []; unreachable_1_0_0 = { features?(unreachable_1_0_0_features {}) }: unreachable_1_0_0_ { dependencies = mapFeatures features ([ void_1_0_2 ]); @@ -1345,9 +1388,9 @@ rec { utf8_ranges_1_0_0_features = f: updateFeatures f (rec { utf8_ranges_1_0_0.default = (f.utf8_ranges_1_0_0.default or true); }) []; - vcpkg_0_2_2 = { features?(vcpkg_0_2_2_features {}) }: vcpkg_0_2_2_ {}; - vcpkg_0_2_2_features = f: updateFeatures f (rec { - vcpkg_0_2_2.default = (f.vcpkg_0_2_2.default or true); + vcpkg_0_2_3 = { features?(vcpkg_0_2_3_features {}) }: vcpkg_0_2_3_ {}; + vcpkg_0_2_3_features = f: updateFeatures f (rec { + vcpkg_0_2_3.default = (f.vcpkg_0_2_3.default or true); }) []; vec_map_0_8_0 = { features?(vec_map_0_8_0_features {}) }: vec_map_0_8_0_ { dependencies = mapFeatures features ([]); @@ -1374,20 +1417,34 @@ rec { (f.void_1_0_2.default or false) || (void_1_0_2.default or false); }) []; - winapi_0_2_8 = { features?(winapi_0_2_8_features {}) }: winapi_0_2_8_ {}; - winapi_0_2_8_features = f: updateFeatures f (rec { - winapi_0_2_8.default = (f.winapi_0_2_8.default or true); + winapi_0_3_4 = { features?(winapi_0_3_4_features {}) }: winapi_0_3_4_ { + dependencies = (if kernel == "i686-pc-windows-gnu" then mapFeatures features ([ winapi_i686_pc_windows_gnu_0_4_0 ]) else []) + ++ (if kernel == "x86_64-pc-windows-gnu" then mapFeatures features ([ winapi_x86_64_pc_windows_gnu_0_4_0 ]) else []); + features = mkFeatures (features.winapi_0_3_4 or {}); + }; + winapi_0_3_4_features = f: updateFeatures f (rec { + winapi_0_3_4.default = (f.winapi_0_3_4.default or true); + winapi_i686_pc_windows_gnu_0_4_0.default = true; + winapi_x86_64_pc_windows_gnu_0_4_0.default = true; + }) [ winapi_i686_pc_windows_gnu_0_4_0_features winapi_x86_64_pc_windows_gnu_0_4_0_features ]; + winapi_i686_pc_windows_gnu_0_4_0 = { features?(winapi_i686_pc_windows_gnu_0_4_0_features {}) }: winapi_i686_pc_windows_gnu_0_4_0_ {}; + winapi_i686_pc_windows_gnu_0_4_0_features = f: updateFeatures f (rec { + winapi_i686_pc_windows_gnu_0_4_0.default = (f.winapi_i686_pc_windows_gnu_0_4_0.default or true); }) []; - winapi_build_0_1_1 = { features?(winapi_build_0_1_1_features {}) }: winapi_build_0_1_1_ {}; - winapi_build_0_1_1_features = f: updateFeatures f (rec { - winapi_build_0_1_1.default = (f.winapi_build_0_1_1.default or true); + winapi_x86_64_pc_windows_gnu_0_4_0 = { features?(winapi_x86_64_pc_windows_gnu_0_4_0_features {}) }: winapi_x86_64_pc_windows_gnu_0_4_0_ {}; + winapi_x86_64_pc_windows_gnu_0_4_0_features = f: updateFeatures f (rec { + winapi_x86_64_pc_windows_gnu_0_4_0.default = (f.winapi_x86_64_pc_windows_gnu_0_4_0.default or true); }) []; - wincolor_0_1_4 = { features?(wincolor_0_1_4_features {}) }: wincolor_0_1_4_ { - dependencies = mapFeatures features ([ kernel32_sys_0_2_2 winapi_0_2_8 ]); - }; - wincolor_0_1_4_features = f: updateFeatures f (rec { - kernel32_sys_0_2_2.default = true; - winapi_0_2_8.default = true; - wincolor_0_1_4.default = (f.wincolor_0_1_4.default or true); - }) [ kernel32_sys_0_2_2_features winapi_0_2_8_features ]; + wincolor_0_1_6 = { features?(wincolor_0_1_6_features {}) }: wincolor_0_1_6_ { + dependencies = mapFeatures features ([ winapi_0_3_4 ]); + }; + wincolor_0_1_6_features = f: updateFeatures f (rec { + winapi_0_3_4.consoleapi = true; + winapi_0_3_4.default = true; + winapi_0_3_4.minwindef = true; + winapi_0_3_4.processenv = true; + winapi_0_3_4.winbase = true; + winapi_0_3_4.wincon = true; + wincolor_0_1_6.default = (f.wincolor_0_1_6.default or true); + }) [ winapi_0_3_4_features ]; } diff --git a/pkgs/build-support/trivial-builders.nix b/pkgs/build-support/trivial-builders.nix index 9664abeb4651..d092efb556e5 100644 --- a/pkgs/build-support/trivial-builders.nix +++ b/pkgs/build-support/trivial-builders.nix @@ -170,6 +170,7 @@ rec { *** _EOF_ + exit 1 ''; }; diff --git a/pkgs/build-support/vm/default.nix b/pkgs/build-support/vm/default.nix index 8e8b88a9bd2d..08d0a358e61f 100644 --- a/pkgs/build-support/vm/default.nix +++ b/pkgs/build-support/vm/default.nix @@ -997,22 +997,22 @@ rec { }; debian9i386 = { - name = "debian-9.3-stretch-i386"; - fullName = "Debian 9.3 Stretch (i386)"; + name = "debian-9.4-stretch-i386"; + fullName = "Debian 9.4 Stretch (i386)"; packagesList = fetchurl { url = mirror://debian/dists/stretch/main/binary-i386/Packages.xz; - sha256 = "1rpv0r92pkr9dmjvpffvgmq3an1s83npfmq870h67jqag3qpwj9l"; + sha256 = "05z5ccg4ysbrgallhai53sh83i0364w7a3fdq84dpv1li059jf10"; }; urlPrefix = mirror://debian; packages = commonDebianPackages; }; debian9x86_64 = { - name = "debian-9.3-stretch-amd64"; - fullName = "Debian 9.3 Stretch (amd64)"; + name = "debian-9.4-stretch-amd64"; + fullName = "Debian 9.4 Stretch (amd64)"; packagesList = fetchurl { url = mirror://debian/dists/stretch/main/binary-amd64/Packages.xz; - sha256 = "1gnkvh7wc5yp0rw8kq8p8rlskvl0lc4cv3gdylw8qpqzy75xqlig"; + sha256 = "19j0c54b1b9lbk9fv2c2aswdh0s2c3klf97zrlmsz4hs8wm9jylq"; }; urlPrefix = mirror://debian; packages = commonDebianPackages; diff --git a/pkgs/data/fonts/babelstone-han/default.nix b/pkgs/data/fonts/babelstone-han/default.nix index acfcc9181045..fbf62e3ba386 100644 --- a/pkgs/data/fonts/babelstone-han/default.nix +++ b/pkgs/data/fonts/babelstone-han/default.nix @@ -1,19 +1,19 @@ {stdenv, fetchzip}: let - version = "11.0.0"; + version = "11.0.2"; in fetchzip { name = "babelstone-han-${version}"; - url = http://www.babelstone.co.uk/Fonts/3902/BabelStoneHan.zip; + url = http://www.babelstone.co.uk/Fonts/Download/BabelStoneHan.zip; postFetch = '' mkdir -p $out/share/fonts/truetype unzip $downloadedFile '*.ttf' -d $out/share/fonts/truetype ''; - sha256 = "1w3v69lacsy0nha20rkbs6f0dskf5xm6p250qx4a1m69d4a1gx7v"; + sha256 = "003cz520riskjp729y3piqhmnzfw3jyrmb94im7jyvlc7hp14cdh"; meta = with stdenv.lib; { - description = "Unicode CJK font with over 32600 Han characters"; + description = "Unicode CJK font with over 36000 Han characters"; homepage = http://www.babelstone.co.uk/Fonts/Han.html; license = licenses.free; diff --git a/pkgs/data/fonts/dejavu-fonts/default.nix b/pkgs/data/fonts/dejavu-fonts/default.nix index 23158a38f218..251654e2d58d 100644 --- a/pkgs/data/fonts/dejavu-fonts/default.nix +++ b/pkgs/data/fonts/dejavu-fonts/default.nix @@ -1,4 +1,4 @@ -{fetchFromGitHub, stdenv, fontforge, perl, FontTTF}: +{ fetchFromGitHub, stdenv, fontforge, perl, perlPackages }: let version = "2.37"; @@ -25,7 +25,7 @@ let full-ttf = stdenv.mkDerivation { name = "dejavu-fonts-full-${version}"; - nativeBuildInputs = [fontforge perl FontTTF]; + nativeBuildInputs = [fontforge perl perlPackages.IOString perlPackages.FontTTF]; src = fetchFromGitHub { owner = "dejavu-fonts"; diff --git a/pkgs/data/icons/papirus-icon-theme/default.nix b/pkgs/data/icons/papirus-icon-theme/default.nix index df974d8a0359..c0f4727f48fb 100644 --- a/pkgs/data/icons/papirus-icon-theme/default.nix +++ b/pkgs/data/icons/papirus-icon-theme/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "papirus-icon-theme-${version}"; - version = "20180214"; + version = "20180401"; src = fetchFromGitHub { owner = "PapirusDevelopmentTeam"; repo = "papirus-icon-theme"; rev = version; - sha256 = "0lsp5cmq5wdqw6vyh6hqqrshgpzxfj8dx87l7qdlgrk73dajjmki"; + sha256 = "1cbzv3igc6j05h0mq2850fwfd8sxxwixzgmhh85mc1k326rvncil"; }; nativeBuildInputs = [ gtk3 ]; diff --git a/pkgs/data/misc/hackage/default.nix b/pkgs/data/misc/hackage/default.nix index 781f57610e0b..38f8030cc272 100644 --- a/pkgs/data/misc/hackage/default.nix +++ b/pkgs/data/misc/hackage/default.nix @@ -1,6 +1,6 @@ { fetchurl }: fetchurl { - url = "https://github.com/commercialhaskell/all-cabal-hashes/archive/b35023f435e7713e5053d3dcd16691e3aff48227.tar.gz"; - sha256 = "1mnh1bhr8caszxrl44l3iig8kshq7djibnmy0sx0q7inj260xcs7"; + url = "https://github.com/commercialhaskell/all-cabal-hashes/archive/9cd032898a8fd11b69827ff02d2f295cac0907d9.tar.gz"; + sha256 = "1xxg3dcp5jgin978sa9510ji10p2j47x7b2n0xz00wrs9yjn5zvg"; } diff --git a/pkgs/data/misc/osinfo-db/default.nix b/pkgs/data/misc/osinfo-db/default.nix index 93676b790890..09c677c35bda 100644 --- a/pkgs/data/misc/osinfo-db/default.nix +++ b/pkgs/data/misc/osinfo-db/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, osinfo-db-tools, intltool, libxml2 }: stdenv.mkDerivation rec { - name = "osinfo-db-20180325"; + name = "osinfo-db-20180416"; src = fetchurl { url = "https://releases.pagure.org/libosinfo/${name}.tar.xz"; - sha256 = "0lma4szxwg5vzb23p3hplllz9yi77x57dzijsz6n4qa399wzv8rs"; + sha256 = "0qam3qbrwzrz40pikhb8y11lidpb6snsa80ym8s6hp5kh4icr1h6"; }; nativeBuildInputs = [ osinfo-db-tools intltool libxml2 ]; diff --git a/pkgs/data/sgml+xml/stylesheets/xslt/docbook-xsl/default.nix b/pkgs/data/sgml+xml/stylesheets/xslt/docbook-xsl/default.nix index e965882a9c3c..ef7b1f93d74e 100644 --- a/pkgs/data/sgml+xml/stylesheets/xslt/docbook-xsl/default.nix +++ b/pkgs/data/sgml+xml/stylesheets/xslt/docbook-xsl/default.nix @@ -60,6 +60,7 @@ in { docbook_xsl_ns = common { pname = "docbook-xsl-ns"; sha256 = "170ggf5dgjar65kkn5n33kvjr3pdinpj66nnxfx8b2avw0k91jin"; - }; + patches = [ ./docbook-xsl-ns-infinite.patch ]; + }; } diff --git a/pkgs/data/sgml+xml/stylesheets/xslt/docbook-xsl/docbook-xsl-ns-infinite.patch b/pkgs/data/sgml+xml/stylesheets/xslt/docbook-xsl/docbook-xsl-ns-infinite.patch new file mode 100644 index 000000000000..5729f9b43c80 --- /dev/null +++ b/pkgs/data/sgml+xml/stylesheets/xslt/docbook-xsl/docbook-xsl-ns-infinite.patch @@ -0,0 +1,30 @@ +Description: Remove infinite recursion +Attribute: docbook5_xsl +Version: 1.79.1 +URL: https://github.com/NixOS/nixpkgs/issues/39090 +diff -ru a/lib/lib.xsl b/lib/lib.xsl +--- a/lib/lib.xsl 2015-12-26 15:15:37.000000000 -0800 ++++ b/lib/lib.xsl 2018-03-22 11:52:45.311949264 -0700 +@@ -11,8 +11,10 @@ + + ******************************************************************** --> + <xsl:stylesheet exclude-result-prefixes="d" +- xmlns:xsl="http://www.w3.org/1999/XSL/Transform" xmlns:d="http://docbook.org/ns/docbook" +-version="1.0"> ++ xmlns:xsl="http://www.w3.org/1999/XSL/Transform" ++ xmlns:d="http://docbook.org/ns/docbook" ++ xmlns:str="http://exslt.org/strings" ++ version="1.0"> + + <xsl:template name="dot.count"> + <!-- Returns the number of "." characters in a string --> +@@ -58,6 +61,9 @@ + <xsl:param name="replacement"/> + + <xsl:choose> ++ <xsl:when test="function-available('str:replace')"> ++ <xsl:value-of select="str:replace($string, string($target), string($replacement))"/> ++ </xsl:when> + <xsl:when test="contains($string, $target)"> + <xsl:variable name="rest"> + <xsl:call-template name="string.subst"> diff --git a/pkgs/desktops/deepin/default.nix b/pkgs/desktops/deepin/default.nix index b03349ce2dff..2070e7bc77f5 100644 --- a/pkgs/desktops/deepin/default.nix +++ b/pkgs/desktops/deepin/default.nix @@ -1,14 +1,10 @@ -{ pkgs, newScope }: +{ pkgs, makeScope, libsForQt5 }: let - callPackage = newScope self; - - self = rec { + packages = self: with self; { deepin-gtk-theme = callPackage ./deepin-gtk-theme { }; - deepin-icon-theme = callPackage ./deepin-icon-theme { }; - deepin-terminal = callPackage ./deepin-terminal { inherit (pkgs.gnome3) libgee vte; wnck = pkgs.libwnck3; @@ -16,4 +12,5 @@ let }; -in self +in + makeScope libsForQt5.newScope packages diff --git a/pkgs/desktops/gnome-2/default.nix b/pkgs/desktops/gnome-2/default.nix index cc4536785251..80f2c9ce70d7 100644 --- a/pkgs/desktops/gnome-2/default.nix +++ b/pkgs/desktops/gnome-2/default.nix @@ -1,4 +1,4 @@ -{ callPackage, self, stdenv, gettext, gvfs, libunique, bison2 +{ callPackage, self, stdenv, gettext, gvfs, libunique, bison2, rarian , libstartup_notification, overrides ? {} }: let overridden = set // overrides; set = with overridden; { @@ -14,6 +14,7 @@ let overridden = set // overrides; set = with overridden; { gnome_desktop = gnome-desktop; gnome_settings_daemon = gnome-settings-daemon; gnome_control_center = gnome-control-center; + inherit rarian; #### PLATFORM @@ -93,9 +94,6 @@ let overridden = set // overrides; set = with overridden; { # Removed from recent GNOME releases, but still required scrollkeeper = callPackage ./desktop/scrollkeeper { }; - # scrollkeeper replacement - rarian = callPackage ./desktop/rarian { }; - zenity = callPackage ./desktop/zenity { }; metacity = callPackage ./desktop/metacity { }; diff --git a/pkgs/desktops/gnome-2/desktop/rarian/default.nix b/pkgs/desktops/gnome-2/desktop/rarian/default.nix deleted file mode 100644 index d2bcaa7c5e10..000000000000 --- a/pkgs/desktops/gnome-2/desktop/rarian/default.nix +++ /dev/null @@ -1,12 +0,0 @@ -{stdenv, fetchurl, pkgconfig, perl, perlXMLParser, libxml2, libxslt, docbook_xml_dtd_42}: - -stdenv.mkDerivation rec { - name = "rarian-0.8.1"; - src = fetchurl { - url = "mirror://gnome/sources/rarian/0.8/${name}.tar.bz2"; - sha256 = "aafe886d46e467eb3414e91fa9e42955bd4b618c3e19c42c773026b205a84577"; - }; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ perl perlXMLParser libxml2 libxslt]; - configureFlags = "--with-xml-catalog=${docbook_xml_dtd_42}/xml/dtd/docbook/docbook.cat"; -} diff --git a/pkgs/desktops/gnome-2/platform/gtkglext/default.nix b/pkgs/desktops/gnome-2/platform/gtkglext/default.nix index 3a316f71f082..834ec2201581 100644 --- a/pkgs/desktops/gnome-2/platform/gtkglext/default.nix +++ b/pkgs/desktops/gnome-2/platform/gtkglext/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, glib, gtk, libGLU_combined, pango, pangox_compat, xorg }: +{ stdenv, fetchurl, fetchpatch, pkgconfig, glib, gtk, libGLU_combined, pango, pangox_compat, xorg }: stdenv.mkDerivation rec { name = "gtkglext-1.2.0"; @@ -12,9 +12,20 @@ stdenv.mkDerivation rec { [ pkgconfig glib gtk libGLU_combined pango libX11 libXmu ]; propagatedBuildInputs = [ pangox_compat ]; - # The library uses `GTK_WIDGET_REALIZED', `GTK_WIDGET_TOPLEVEL', and - # `GTK_WIDGET_NO_WINDOW', all of which appear to be deprecated nowadays. - CPPFLAGS = "-UGTK_DISABLE_DEPRECATED"; + patches = [ + # The library uses `GTK_WIDGET_REALIZED', `GTK_WIDGET_TOPLEVEL', and + # `GTK_WIDGET_NO_WINDOW', all of which appear to be deprecated nowadays. + (fetchpatch { + name = "02_fix_gtk-2.20_deprecated_symbols.diff"; + url = https://git.gnome.org/browse/gtkglext/patch/?id=d8f285d1397f6c41099c67e668288eecc1cdae67; + sha256 = "1zxak73plhy3m6psil1q9ssvjh9aqrif7kcbcz69y480qfb4ja08"; + }) + # Fix build with glibc ≥ 2.27 + (fetchurl { + url = https://salsa.debian.org/gewo/gtkglext/raw/3b002677c907890c7de002c9f5b4b3ec71d11b31/debian/patches/04_glibc2.27-ftbfs.diff; + sha256 = "1l1swkjkai6pnah23xfsfpbq2fgbhp5pzj3l0ybsx6b858cxqzj5"; + }) + ]; meta = with stdenv.lib; { homepage = https://projects.gnome.org/gtkglext/; diff --git a/pkgs/desktops/gnome-3/apps/bijiben/default.nix b/pkgs/desktops/gnome-3/apps/bijiben/default.nix index 91b16bbba96e..93a2c41caf35 100644 --- a/pkgs/desktops/gnome-3/apps/bijiben/default.nix +++ b/pkgs/desktops/gnome-3/apps/bijiben/default.nix @@ -5,13 +5,13 @@ , gnome3, libxml2 }: let - version = "3.28.0"; + version = "3.28.1"; in stdenv.mkDerivation rec { name = "bijiben-${version}"; src = fetchurl { url = "mirror://gnome/sources/bijiben/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "047w8kigrdmphd17dma2lldf6r60sgx3zybai9bz9yr0hm601kr6"; + sha256 = "0ivx3hbpg7qaqzpbbn06lz9w3q285vhwgfr353b14bg0nsidwy17"; }; doCheck = true; diff --git a/pkgs/desktops/gnome-3/apps/evolution/default.nix b/pkgs/desktops/gnome-3/apps/evolution/default.nix index f41262d85b4e..d7def6e27091 100644 --- a/pkgs/desktops/gnome-3/apps/evolution/default.nix +++ b/pkgs/desktops/gnome-3/apps/evolution/default.nix @@ -5,13 +5,13 @@ , libcanberra-gtk3, bogofilter, gst_all_1, procps, p11-kit, openldap }: let - version = "3.28.0"; + version = "3.28.1"; in stdenv.mkDerivation rec { name = "evolution-${version}"; src = fetchurl { url = "mirror://gnome/sources/evolution/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "0b6yw664jdfc8ppd78akmrl36iximh7ipknf5mlzgga6lr6pl2nf"; + sha256 = "0sdv5lg2vlz5f4raymz9d8a5jq4j18vbqyigaip6508p3bjnfj8l"; }; propagatedUserEnvPkgs = [ gnome3.evolution-data-server ]; diff --git a/pkgs/desktops/gnome-3/apps/gedit/default.nix b/pkgs/desktops/gnome-3/apps/gedit/default.nix index 7c90b16d86a1..919ebdd77d17 100644 --- a/pkgs/desktops/gnome-3/apps/gedit/default.nix +++ b/pkgs/desktops/gnome-3/apps/gedit/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "gedit-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gedit/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "0pyam0zi44xq776x20ycqnvmf86l98jns8ldv4m81gnp9wnhmycv"; + sha256 = "0791r07d3ixmmfk68lvhp3d5i4vnlrnx10csxwgpfqyfb04vwx7i"; }; nativeBuildInputs = [ pkgconfig wrapGAppsHook intltool itstool libxml2 ]; diff --git a/pkgs/desktops/gnome-3/apps/glade/default.nix b/pkgs/desktops/gnome-3/apps/glade/default.nix index 577382a49866..a1777137c019 100644 --- a/pkgs/desktops/gnome-3/apps/glade/default.nix +++ b/pkgs/desktops/gnome-3/apps/glade/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "glade-${version}"; - version = "3.22.0"; + version = "3.22.1"; src = fetchurl { url = "mirror://gnome/sources/glade/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1j7kpy4jisz4nkd3yb5af4vd4bapyqchvp2gvq6ypfw3b0x88rkc"; + sha256 = "16p38xavpid51qfy0s26n0n21f9ws1w9k5s65bzh1w7ay8p9my6z"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/apps/gnome-boxes/default.nix b/pkgs/desktops/gnome-3/apps/gnome-boxes/default.nix index 52fa45812fa3..8921d70787ca 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-boxes/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-boxes/default.nix @@ -9,13 +9,13 @@ # TODO: ovirt (optional) let - version = "3.27.92"; + version = "3.28.2"; in stdenv.mkDerivation rec { name = "gnome-boxes-${version}"; src = fetchurl { url = "mirror://gnome/sources/gnome-boxes/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1v1br4zh2w3w70np5imi31md6lnqamabiin521f806rdrxsnyggq"; + sha256 = "0xss6wrs4hkmr0aa9qxr9b6wxbygrkjz4p0c4xnymicq97jnwra1"; }; doCheck = true; diff --git a/pkgs/desktops/gnome-3/apps/gnome-calendar/default.nix b/pkgs/desktops/gnome-3/apps/gnome-calendar/default.nix index 35888b21c2e8..b88bad2f6497 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-calendar/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-calendar/default.nix @@ -4,13 +4,13 @@ let pname = "gnome-calendar"; - version = "3.28.0"; + version = "3.28.1"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1y5d6rgw7j5hy147i3ff73q9kkwj3nbyms7j705nfhri3s1ypqgs"; + sha256 = "1jacznnjql5jgzvzcp5kh2k0cd0y41cri6qz2bsakpllf7adbrq6"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/apps/gnome-getting-started-docs/default.nix b/pkgs/desktops/gnome-3/apps/gnome-getting-started-docs/default.nix index 3fc444dbdd4a..b3ede7028902 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-getting-started-docs/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-getting-started-docs/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "gnome-getting-started-docs-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gnome-getting-started-docs/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "09khgzrbvcqvgjkqh8rp609bx818v5c8gzq61nxy5582s8habg8g"; + sha256 = "0x60aava6ba4xliy4p4i6jm5d2nq8hx9aqgnaw4d34fvmcpcy5w0"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/apps/gnome-maps/default.nix b/pkgs/desktops/gnome-3/apps/gnome-maps/default.nix index 1c9d243c0c51..b5c8188bd064 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-maps/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-maps/default.nix @@ -5,13 +5,13 @@ let pname = "gnome-maps"; - version = "3.28.0"; + version = "3.28.1"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1imcgw67cw1qkfz8m2my0f4qmss11fbqqqi4w7afcfq9p0rplgy0"; + sha256 = "19xx1v25ycr8ih4jwb1vc662jcx6kynaf7baj4i569ccrcwaj2d5"; }; doCheck = true; diff --git a/pkgs/desktops/gnome-3/apps/gnome-music/default.nix b/pkgs/desktops/gnome-3/apps/gnome-music/default.nix index 982cd9283ffd..c2d5045e79ea 100644 --- a/pkgs/desktops/gnome-3/apps/gnome-music/default.nix +++ b/pkgs/desktops/gnome-3/apps/gnome-music/default.nix @@ -6,13 +6,13 @@ python3.pkgs.buildPythonApplication rec { pname = "gnome-music"; - version = "3.28.0.1"; + version = "3.28.1"; format = "other"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${gnome3.versionBranch version}/${pname}-${version}.tar.xz"; - sha256 = "0yyysmxwmk167n8wghcbmxz73kgl1y1j9js3mgkjjqsmkd9brk65"; + sha256 = "0xbwndfl72292dx4x99vm0iyrcy8xw2i5fhsch7b073rk4ydbyfx"; }; nativeBuildInputs = [ meson ninja gettext itstool pkgconfig libxml2 wrapGAppsHook desktop-file-utils appstream-glib gobjectIntrospection ]; diff --git a/pkgs/desktops/gnome-3/core/eog/default.nix b/pkgs/desktops/gnome-3/core/eog/default.nix index 502485862614..85587d11178d 100644 --- a/pkgs/desktops/gnome-3/core/eog/default.nix +++ b/pkgs/desktops/gnome-3/core/eog/default.nix @@ -4,13 +4,13 @@ let pname = "eog"; - version = "3.28.0"; + version = "3.28.1"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "0d8fi5ydsh8n7d85dps8svl1bhid1p8jbnlwiqywj2gd2wpxpyjv"; + sha256 = "1v3s4x4xdmfa488drwvxfps33jiyh3qz9z8v8s3779n1jn92rmbq"; }; nativeBuildInputs = [ meson ninja pkgconfig gettext itstool wrapGAppsHook libxml2 gobjectIntrospection ]; diff --git a/pkgs/desktops/gnome-3/core/epiphany/default.nix b/pkgs/desktops/gnome-3/core/epiphany/default.nix index 6877b20df44d..c9537f497690 100644 --- a/pkgs/desktops/gnome-3/core/epiphany/default.nix +++ b/pkgs/desktops/gnome-3/core/epiphany/default.nix @@ -6,11 +6,11 @@ stdenv.mkDerivation rec { name = "epiphany-${version}"; - version = "3.28.0.1"; + version = "3.28.1.1"; src = fetchurl { url = "mirror://gnome/sources/epiphany/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "023q6xnwsafac38lavxwgph5lcd2igxpiwqb4kr72mv56xlb0m3i"; + sha256 = "15d4dr4dwb1dyw3mvs7wp5gik57kdg0rxdc49n92wx46wfh6lhlr"; }; # Tests need an X display diff --git a/pkgs/desktops/gnome-3/core/evince/default.nix b/pkgs/desktops/gnome-3/core/evince/default.nix index 59a7c6806efa..74f10cc384d7 100644 --- a/pkgs/desktops/gnome-3/core/evince/default.nix +++ b/pkgs/desktops/gnome-3/core/evince/default.nix @@ -9,11 +9,11 @@ stdenv.mkDerivation rec { name = "evince-${version}"; - version = "3.28.0"; + version = "3.28.2"; src = fetchurl { url = "mirror://gnome/sources/evince/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1a3kcls18dcz1lj8hrx8skcli9xxfyi71c17xjwayh71cm5jc8zs"; + sha256 = "1qbk1x2c7iacmmfwjzh136v2sdacrkqn9d6bnqid7xn9hlnx4m89"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/core/evolution-data-server/default.nix b/pkgs/desktops/gnome-3/core/evolution-data-server/default.nix index 7a01d73ebf46..01891ad82473 100644 --- a/pkgs/desktops/gnome-3/core/evolution-data-server/default.nix +++ b/pkgs/desktops/gnome-3/core/evolution-data-server/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { name = "evolution-data-server-${version}"; - version = "3.28.0"; + version = "3.28.1"; outputs = [ "out" "dev" ]; src = fetchurl { url = "mirror://gnome/sources/evolution-data-server/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1ybyyy6nls11az8lbri1y9527snz5h7qbhyfqvk0vc6vzvald5gv"; + sha256 = "12b9lfgwd57rzn9394xrbvl9ym5aqldpz9v7c9a421dsv8dgq13b"; }; nativeBuildInputs = [ diff --git a/pkgs/desktops/gnome-3/core/gdm/default.nix b/pkgs/desktops/gnome-3/core/gdm/default.nix index 999c3f05748b..6b6b23f21b54 100644 --- a/pkgs/desktops/gnome-3/core/gdm/default.nix +++ b/pkgs/desktops/gnome-3/core/gdm/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "gdm-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gdm/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "0i5rzr6fdvlm88gl85gvql1wf1yflkmg90x81dqjf39as3ixs81s"; + sha256 = "1yxjjyrp0ywrc25cp81bsdhp79zn0c0jag48hlp00b5wfnkqy1kp"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/core/gjs/default.nix b/pkgs/desktops/gnome-3/core/gjs/default.nix index 888eb073a46a..fc352de2acf8 100644 --- a/pkgs/desktops/gnome-3/core/gjs/default.nix +++ b/pkgs/desktops/gnome-3/core/gjs/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "gjs-${version}"; - version = "1.52.0"; + version = "1.52.2"; src = fetchurl { url = "mirror://gnome/sources/gjs/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1jm40imin4sxzfcxcbmf4v71apk8y9icccq1a4m4mlz1wm2s092m"; + sha256 = "00x08ypx61i3k84bmvkhdj37q81g79lzm5sxqm1lz4xzzad9rg98"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/core/gnome-calculator/default.nix b/pkgs/desktops/gnome-3/core/gnome-calculator/default.nix index f30243003cbb..03fdf4b14fe0 100644 --- a/pkgs/desktops/gnome-3/core/gnome-calculator/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-calculator/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "gnome-calculator-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gnome-calculator/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1qnfvmf615v52c8h1f6zxbvpywi3512hnzyf9azvxb8a6q0rx1vn"; + sha256 = "05zpdp9mkfjz22hs7hfjikkxhzmvy02mxrldrjxsv8ff17w9xvic"; }; nativeBuildInputs = [ diff --git a/pkgs/desktops/gnome-3/core/gnome-contacts/default.nix b/pkgs/desktops/gnome-3/core/gnome-contacts/default.nix index 9c9b26360aa8..c8636cb1dc1f 100644 --- a/pkgs/desktops/gnome-3/core/gnome-contacts/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-contacts/default.nix @@ -5,13 +5,13 @@ , vala, meson, ninja }: let - version = "3.28.0"; + version = "3.28.1"; in stdenv.mkDerivation rec { name = "gnome-contacts-${version}"; src = fetchurl { url = "mirror://gnome/sources/gnome-contacts/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1qqj6k5rvmvg6v6vg4cak98w6rqknpqfsm0vfrwva6l6wbql2v8i"; + sha256 = "17iinxqf221kk9yppv3yhg0m7jxk5zvwxmdf3hjygf9xgfw7z3zi"; }; propagatedUserEnvPkgs = [ evolution-data-server ]; diff --git a/pkgs/desktops/gnome-3/core/gnome-control-center/default.nix b/pkgs/desktops/gnome-3/core/gnome-control-center/default.nix index 5f6ed213e3e0..55ac087cfa2c 100644 --- a/pkgs/desktops/gnome-3/core/gnome-control-center/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-control-center/default.nix @@ -9,13 +9,13 @@ let pname = "gnome-control-center"; - version = "3.28.0"; + version = "3.28.1"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "0nyx5nl2rky0249rdcy0hsccnxf3angpya0q859rrbrwaixqnxh3"; + sha256 = "0f2p91bzbl39q3cb1qj5vi55km7wxb2fibx07vciz39g5va5cpn6"; }; nativeBuildInputs = [ diff --git a/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix b/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix index dad8d8177de6..ed1e59da62c2 100644 --- a/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-desktop/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "gnome-desktop-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gnome-desktop/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "17fm5z3kfm1m3420kjpvk1y0pc34p42rqfpmb1npy51jkv1p3pzi"; + sha256 = "16nbgrp0hihvrsa6kmqk0z8y7ajravyagmkmq1nnwn27psi9g8vq"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/core/gnome-disk-utility/default.nix b/pkgs/desktops/gnome-3/core/gnome-disk-utility/default.nix index 0478877acb4b..4f9e2dda5402 100644 --- a/pkgs/desktops/gnome-3/core/gnome-disk-utility/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-disk-utility/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "gnome-disk-utility-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gnome-disk-utility/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "0ad98mxyygyzq0y280m6z73anyv3xxr6irpkp6vc803lhdr5b7fc"; + sha256 = "09dmknfas8iifv6k5jb4a9ag57s8awrn0f26fd1qlg0mbfjlnfd6"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/core/gnome-session/default.nix b/pkgs/desktops/gnome-3/core/gnome-session/default.nix index d36e7ce7432e..7b407aad5068 100644 --- a/pkgs/desktops/gnome-3/core/gnome-session/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-session/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "gnome-session-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gnome-session/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1ldcalj9i7qharvw8k8gf7pkcvwb1qwiag2ckffx9x8ic2d3v00b"; + sha256 = "14nmbirgrp2nm16khbz109saqdlinlbrlhjnbjydpnrlimfgg4xq"; }; mesonFlags = [ "-Dsystemd=true" ]; diff --git a/pkgs/desktops/gnome-3/core/gnome-settings-daemon/default.nix b/pkgs/desktops/gnome-3/core/gnome-settings-daemon/default.nix index 2a59d39e8cf4..cfb41c01e6ad 100644 --- a/pkgs/desktops/gnome-3/core/gnome-settings-daemon/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-settings-daemon/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "gnome-settings-daemon-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gnome-settings-daemon/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1p3ccf4a4qbz73hqyx9i55hkp6l7c7la5kazqawcndl7bksywgny"; + sha256 = "0z9dip9p0iav646cmxisii5sbkdr9hmaklc5fzvschpbjkhphksr"; }; patches = [ diff --git a/pkgs/desktops/gnome-3/core/gnome-software/default.nix b/pkgs/desktops/gnome-3/core/gnome-software/default.nix index 2c4663b54ec7..21a1e1a1c4c7 100644 --- a/pkgs/desktops/gnome-3/core/gnome-software/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-software/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "gnome-software-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gnome-software/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "0zwbgxzl805c4l8kwy5bn3p91s2qxlcn4syzzg4vd4kilc6nnjwk"; + sha256 = "0j27zygb3g08q9i8ygwpxqf6g0lrivq2vhj7p7g9x0zh9r0vzlbs"; }; patches = [ diff --git a/pkgs/desktops/gnome-3/core/gnome-system-monitor/default.nix b/pkgs/desktops/gnome-3/core/gnome-system-monitor/default.nix index 5f707152aed8..46a91dda70e0 100644 --- a/pkgs/desktops/gnome-3/core/gnome-system-monitor/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-system-monitor/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "gnome-system-monitor-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gnome-system-monitor/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1wvgx5p0a29d8yzp7rinpln90pg8vsjagqlvm4cxyhnl5hsdvrvn"; + sha256 = "0wdpd5mfrm0gwmwjvcj556c3mpxf3pcfnvh7x698i8if53ci0gw7"; }; doCheck = true; diff --git a/pkgs/desktops/gnome-3/core/gnome-terminal/default.nix b/pkgs/desktops/gnome-3/core/gnome-terminal/default.nix index 9e99e84cfd55..6f80fe0c90bf 100644 --- a/pkgs/desktops/gnome-3/core/gnome-terminal/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-terminal/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "gnome-terminal-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gnome-terminal/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1i5wlcjb0aigm1lbmn16nmh9rkjqfdpzzgf6qw7mcrhgw7pdald5"; + sha256 = "1hqwh12hiy73mazqgvyrq8jk4c669x2fb4nh8mwby3qbk8ca19pp"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/core/gnome-user-docs/default.nix b/pkgs/desktops/gnome-3/core/gnome-user-docs/default.nix index d4ba838bef3c..a8efa2384470 100644 --- a/pkgs/desktops/gnome-3/core/gnome-user-docs/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-user-docs/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "gnome-user-docs-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gnome-user-docs/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "0sx46j61kjn8kaf75303vym5sigki239pqzf5q4n72k1hwp7albp"; + sha256 = "189j78d23c6jr5x5j9nxkbdqxg31xvmwvyblz7f9xi9ncy0qdvfh"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/core/gnome-user-share/default.nix b/pkgs/desktops/gnome-3/core/gnome-user-share/default.nix index 367485668807..509c10d75648 100644 --- a/pkgs/desktops/gnome-3/core/gnome-user-share/default.nix +++ b/pkgs/desktops/gnome-3/core/gnome-user-share/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "gnome-user-share-${version}"; - version = "3.27.90"; + version = "3.28.0"; src = fetchurl { url = "mirror://gnome/sources/gnome-user-share/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1wd183cjr1gmzpsq7bqwkwhmcdng0m105f6ymc89r17fz85f4jhy"; + sha256 = "04wjnrcdlmyszj582nsda32sgi44nwgrw2ksy11xp17nb09d7m09"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/core/nautilus/default.nix b/pkgs/desktops/gnome-3/core/nautilus/default.nix index a52ec342675c..2daaf2d43261 100644 --- a/pkgs/desktops/gnome-3/core/nautilus/default.nix +++ b/pkgs/desktops/gnome-3/core/nautilus/default.nix @@ -4,13 +4,13 @@ let pname = "nautilus"; - version = "3.28.0.1"; + version = "3.28.1"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1i3li3nd434vncd6j6has73xihbzjx1ab0xyw8wif11mym15ixrh"; + sha256 = "19dhpa2ylrg8d5274lahy7xqr2p9z3jnq1h4qmsh95czkpy7is4w"; }; nativeBuildInputs = [ meson ninja pkgconfig libxml2 gettext wrapGAppsHook desktop-file-utils ]; diff --git a/pkgs/desktops/gnome-3/core/simple-scan/default.nix b/pkgs/desktops/gnome-3/core/simple-scan/default.nix index 3528a9a93d9c..e4458b7d0a3f 100644 --- a/pkgs/desktops/gnome-3/core/simple-scan/default.nix +++ b/pkgs/desktops/gnome-3/core/simple-scan/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "simple-scan-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/simple-scan/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "0ki95d0v9l0pb5jvk1v8k49vb7snp9j7bnxw3m8q63m00yl33qhz"; + sha256 = "140vz94vml0vf6kiw3sg436qfvajk21x6q86smvycgf24qfyvk6a"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/core/sushi/default.nix b/pkgs/desktops/gnome-3/core/sushi/default.nix index 00cec2f93b9f..114c0d8ac960 100644 --- a/pkgs/desktops/gnome-3/core/sushi/default.nix +++ b/pkgs/desktops/gnome-3/core/sushi/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "sushi-${version}"; - version = "3.24.0"; + version = "3.28.3"; src = fetchurl { url = "mirror://gnome/sources/sushi/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "f90bb95172664486f8d529995007fd12f0df9d0c998e20658b6203f46ce70d48"; + sha256 = "1yydd34q7r05z0jdgym3r4f8jv8snrcvvhxw0vxn6damlvj5lbiw"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/core/vte/default.nix b/pkgs/desktops/gnome-3/core/vte/default.nix index 73fd244c5489..6577ba3ae587 100644 --- a/pkgs/desktops/gnome-3/core/vte/default.nix +++ b/pkgs/desktops/gnome-3/core/vte/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "vte-${version}"; - version = "0.52.0"; + version = "0.52.1"; src = fetchurl { url = "mirror://gnome/sources/vte/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "0rq5gkg7bfrxlsm8mgdh4605hki81wljmjhhz8x4kbspvpfp5bnm"; + sha256 = "1lva70inb5y8p42rg95fb88z2ybwcz0lybla3ixbgp2sj0s4rzdh"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/core/yelp/default.nix b/pkgs/desktops/gnome-3/core/yelp/default.nix index 691ec2fdb94a..9a47ecd2842a 100644 --- a/pkgs/desktops/gnome-3/core/yelp/default.nix +++ b/pkgs/desktops/gnome-3/core/yelp/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "yelp-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/yelp/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "05qzczxnxk374cp4an166gv60nkbd0jq3pp2fwy7s9rnkm55jz6v"; + sha256 = "033w5qnhm495pnvscnb3k2dagzgq4fsnzcrh0k2rgr10mw2mv2p8"; }; nativeBuildInputs = [ pkgconfig intltool itstool wrapGAppsHook ]; diff --git a/pkgs/desktops/gnome-3/core/zenity/default.nix b/pkgs/desktops/gnome-3/core/zenity/default.nix index 05637e200e31..b97881063427 100644 --- a/pkgs/desktops/gnome-3/core/zenity/default.nix +++ b/pkgs/desktops/gnome-3/core/zenity/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "zenity-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/zenity/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1y3dha9faqgy5l8wqh3qp354gzdh36fx70q2kc9k1nw7p498yn2y"; + sha256 = "0swavrkc5ps3fwzy6h6l5mmim0wwy10xrq0qqkay5d0zf9a965yv"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/default.nix b/pkgs/desktops/gnome-3/default.nix index f35688888997..422dedbce853 100644 --- a/pkgs/desktops/gnome-3/default.nix +++ b/pkgs/desktops/gnome-3/default.nix @@ -311,9 +311,6 @@ let polari = callPackage ./apps/polari { }; - # scrollkeeper replacement - rarian = callPackage ./desktop/rarian { }; - seahorse = callPackage ./apps/seahorse { }; vinagre = callPackage ./apps/vinagre { }; @@ -427,6 +424,7 @@ let libcanberra_gtk2 = libcanberra-gtk2; # added 2018-02-25 libgames-support = libgnome-games-support; # added 2018-03-14 libgnome_keyring = libgnome-keyring; # added 2018-02-25 + inherit (pkgs) rarian; # added 2018-04-25 networkmanager_fortisslvpn = networkmanager-fortisslvpn; # added 2018-02-25 networkmanager_iodine = networkmanager-iodine; # added 2018-02-25 networkmanager_l2tp = networkmanager-l2tp; # added 2018-02-25 diff --git a/pkgs/desktops/gnome-3/devtools/devhelp/default.nix b/pkgs/desktops/gnome-3/devtools/devhelp/default.nix index 786eece7194a..97a425bccb1f 100644 --- a/pkgs/desktops/gnome-3/devtools/devhelp/default.nix +++ b/pkgs/desktops/gnome-3/devtools/devhelp/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "devhelp-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/devhelp/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1b4l71775p3mps1jsv7pz26v0lhd0qczsp6qr1dwv7hyslmpb5qn"; + sha256 = "08a8xizjqz68k30zd37r7g516azhan9bbrjsvv10hjd5dg3f476s"; }; nativeBuildInputs = [ pkgconfig gettext itstool wrapGAppsHook appstream-glib gobjectIntrospection ]; diff --git a/pkgs/desktops/gnome-3/games/gnome-chess/default.nix b/pkgs/desktops/gnome-3/games/gnome-chess/default.nix index 063b97801b4e..aebd72d65df2 100644 --- a/pkgs/desktops/gnome-3/games/gnome-chess/default.nix +++ b/pkgs/desktops/gnome-3/games/gnome-chess/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "gnome-chess-${version}"; - version = "3.28.0"; + version = "3.28.1"; src = fetchurl { url = "mirror://gnome/sources/gnome-chess/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1vxgb36njv4v3bgdpwxd89rvr6s6pkbh9d3xislxqry2yp4f03w0"; + sha256 = "1q8gc0mq8k2b7pjy363g0yjd80czqknw6ssqzbvgqx5b8nkfvmv1"; }; nativeBuildInputs = [ meson ninja vala pkgconfig gettext itstool libxml2 wrapGAppsHook gobjectIntrospection ]; diff --git a/pkgs/desktops/gnome-3/misc/geary/default.nix b/pkgs/desktops/gnome-3/misc/geary/default.nix index 1994b587fbd3..548936dc5e52 100644 --- a/pkgs/desktops/gnome-3/misc/geary/default.nix +++ b/pkgs/desktops/gnome-3/misc/geary/default.nix @@ -6,14 +6,14 @@ let pname = "geary"; - version = "0.12.1"; + version = "0.12.2"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${stdenv.lib.versions.majorMinor version}/${name}.tar.xz"; - sha256 = "12hbpd5j3rb122nrsqmgsg31x82xl0ksm0nmsl614v1dd7crqnh6"; + sha256 = "09j5gh4zm49fcg2ycvy00dkkw69rfppqwc3lqdi4994hry4jivx9"; }; nativeBuildInputs = [ vala_0_40 intltool pkgconfig wrapGAppsHook cmake ninja desktop-file-utils gnome-doc-utils gobjectIntrospection ]; diff --git a/pkgs/desktops/gnome-3/misc/gnome-tweaks/default.nix b/pkgs/desktops/gnome-3/misc/gnome-tweaks/default.nix index a690524b45a8..a7c69de44eb6 100644 --- a/pkgs/desktops/gnome-3/misc/gnome-tweaks/default.nix +++ b/pkgs/desktops/gnome-3/misc/gnome-tweaks/default.nix @@ -5,13 +5,13 @@ let pname = "gnome-tweaks"; - version = "3.28.0"; + version = "3.28.1"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "0d8zxfa8r4n4l6jzyzy6q58padxjlrad3c71mwqidm2ww8nm6i19"; + sha256 = "1p5xydr0haz4389h6dvvbna6i1mipdzvmlfksnv0jqfvfs9sy6fp"; }; nativeBuildInputs = [ diff --git a/pkgs/desktops/gnome-3/misc/gpaste/default.nix b/pkgs/desktops/gnome-3/misc/gpaste/default.nix index 361b1ac97f62..a01820578733 100644 --- a/pkgs/desktops/gnome-3/misc/gpaste/default.nix +++ b/pkgs/desktops/gnome-3/misc/gpaste/default.nix @@ -2,12 +2,12 @@ , pango, gtk3, gnome3, dbus, clutter, appstream-glib, wrapGAppsHook, systemd, gobjectIntrospection }: stdenv.mkDerivation rec { - version = "3.28.1"; + version = "3.28.2"; name = "gpaste-${version}"; src = fetchurl { url = "https://github.com/Keruspe/GPaste/archive/v${version}.tar.gz"; - sha256 = "19rdi2syshrk32hqnjh63fm0wargw546j5wlsnsg1axml0x1xww9"; + sha256 = "1zfx73qpw976hyzp5k569lywsq2b6dbnnzf2cvhjvn3mvkw8pin2"; }; nativeBuildInputs = [ autoreconfHook pkgconfig vala wrapGAppsHook ]; diff --git a/pkgs/desktops/mate/caja/default.nix b/pkgs/desktops/mate/caja/default.nix index bf0583189bc0..9643c9a34164 100644 --- a/pkgs/desktops/mate/caja/default.nix +++ b/pkgs/desktops/mate/caja/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "caja-${version}"; - version = "1.20.1"; + version = "1.21.0"; src = fetchurl { url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz"; - sha256 = "1qqqq3fi1aqjqg36y3v73z4d0bqkx7d5f79i6h9lxyh3s0876v9c"; + sha256 = "0v8zx5rzqh1zkwizkpdckmwm6004cv9sbjghzgz3049xzcqm371g"; }; nativeBuildInputs = [ diff --git a/pkgs/desktops/mate/pluma/default.nix b/pkgs/desktops/mate/pluma/default.nix index bbff7d246978..c1b57504317d 100644 --- a/pkgs/desktops/mate/pluma/default.nix +++ b/pkgs/desktops/mate/pluma/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "pluma-${version}"; - version = "1.20.1"; + version = "1.21.0"; src = fetchurl { url = "http://pub.mate-desktop.org/releases/${mate.getRelease version}/${name}.tar.xz"; - sha256 = "09arzypdz6q1zpxd1qqnsn1ykvhmzlf7nylkz2vpwlvnnd3x8ip3"; + sha256 = "1y3zl0rzp069pix1vgrhzkkfc3lvhq9ahfgbmc88cwqw9aw3mgk0"; }; nativeBuildInputs = [ diff --git a/pkgs/development/compilers/as31/default.nix b/pkgs/development/compilers/as31/default.nix index 93b251707e80..519992fd8c26 100644 --- a/pkgs/development/compilers/as31/default.nix +++ b/pkgs/development/compilers/as31/default.nix @@ -15,9 +15,8 @@ in stdenv.mkDerivation { buildInputs = [ yacc ]; patches = [ - # CVE-2012-0808 (fetchpatch { - name = "as31-mkstemps.patch"; + name = "CVE-2012-0808.patch"; url = "https://bugs.debian.org/cgi-bin/bugreport.cgi?att=1;bug=655496;filename=as31-mkstemps.patch;msg=5"; sha256 = "0iia4wa8m141bwz4588yxb1dp2qwhapcii382sncm6jvwyngwh21"; }) diff --git a/pkgs/development/compilers/closure/default.nix b/pkgs/development/compilers/closure/default.nix index de3126371bfa..e73871fcb095 100644 --- a/pkgs/development/compilers/closure/default.nix +++ b/pkgs/development/compilers/closure/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "closure-compiler-${version}"; - version = "20180319"; + version = "20180402"; src = fetchurl { url = "https://dl.google.com/closure-compiler/compiler-${version}.tar.gz"; - sha256 = "181cskxamq9vkrmb2c78v6hpknrzzp49vkzp53r9pisf5j0p7220"; + sha256 = "1xbr2wvppzhq189z9m70zqry2a3hh6cdydwbc1jm2z7imsg1i6c1"; }; sourceRoot = "."; diff --git a/pkgs/development/compilers/ecl/16.1.2.nix b/pkgs/development/compilers/ecl/16.1.2.nix index 30fee77321f5..291b0ed013d6 100644 --- a/pkgs/development/compilers/ecl/16.1.2.nix +++ b/pkgs/development/compilers/ecl/16.1.2.nix @@ -1,10 +1,14 @@ -{stdenv, fetchurl +{ stdenv, fetchurl, fetchpatch , libtool, autoconf, automake , gmp, mpfr, libffi, makeWrapper , noUnicode ? false , gcc -, threadSupport ? true +, threadSupport ? false +, useBoehmgc ? true, boehmgc }: + +assert useBoehmgc -> boehmgc != null; + let s = # Generated upstream information rec { @@ -19,6 +23,9 @@ let ]; propagatedBuildInputs = [ libffi gmp mpfr gcc + ] ++ stdenv.lib.optionals useBoehmgc [ + # replaces ecl's own gc which other packages can depend on, thus propagated + boehmgc ]; in stdenv.mkDerivation { @@ -39,6 +46,15 @@ stdenv.mkDerivation { "--enable-unicode") ; + patches = [ + (fetchpatch { + # Avoid infinite loop, see https://gitlab.com/embeddable-common-lisp/ecl/issues/43 (fixed upstream) + name = "avoid-infinite-loop.patch"; + url = "https://gitlab.com/embeddable-common-lisp/ecl/commit/caba1989f40ef917e7486f41b9cd5c7e3c5c2d79.patch"; + sha256 = "07vw91psbc9gdn8grql46ra8lq3bgkzg5v480chnbryna4sv6lbb"; + }) + ]; + hardeningDisable = [ "format" ]; postInstall = '' diff --git a/pkgs/development/compilers/ecl/default.nix b/pkgs/development/compilers/ecl/default.nix index e506e3aace1f..33ed690772ea 100644 --- a/pkgs/development/compilers/ecl/default.nix +++ b/pkgs/development/compilers/ecl/default.nix @@ -4,6 +4,7 @@ , noUnicode ? false , gcc , threadSupport ? true +, useBoehmgc ? false, boehmgc }: let s = # Generated upstream information @@ -20,6 +21,10 @@ let ]; propagatedBuildInputs = [ libffi gmp mpfr gcc + # replaces ecl's own gc which other packages can depend on, thus propagated + ] ++ stdenv.lib.optionals useBoehmgc [ + # replaces ecl's own gc which other packages can depend on, thus propagated + boehmgc ]; in stdenv.mkDerivation { @@ -53,6 +58,7 @@ stdenv.mkDerivation { meta = { inherit (s) version; description = "Lisp implementation aiming to be small, fast and easy to embed"; + homepage = https://common-lisp.net/project/ecl/; license = stdenv.lib.licenses.mit ; maintainers = [stdenv.lib.maintainers.raskin]; platforms = stdenv.lib.platforms.linux; diff --git a/pkgs/development/compilers/eli/default.nix b/pkgs/development/compilers/eli/default.nix new file mode 100644 index 000000000000..93e53aa30d13 --- /dev/null +++ b/pkgs/development/compilers/eli/default.nix @@ -0,0 +1,91 @@ +{ stdenv +, fetchurl +, symlinkJoin +, makeWrapper +, tcl +, fontconfig +, tk +, ncurses +, xorg +, file +}: + +let + # eli derives the location of the include folder from the location of the lib folder + tk_combined = symlinkJoin { + name = "tk_combined"; + paths = [ + tk + tk.dev + ]; + }; + curses_combined = symlinkJoin { + name = "curses_combined"; + paths = [ + ncurses + ncurses.dev + ]; + }; +in +stdenv.mkDerivation rec { + name = "eli"; + version = "4.8.1"; + + src = fetchurl { + url = "mirror://sourceforge/project/eli-project/Eli/Eli%20${version}/eli-${version}.tar.bz2"; + sha256="1vran8583hbwrr5dciji4zkhz3f88w4mn8n9sdpr6zw0plpf1whj"; + }; + + buildInputs = [ + ncurses + fontconfig + ] ++ (with xorg; [ + libX11.dev + libXt.dev + libXaw.dev + libXext.dev + ]); + + nativeBuildInputs = [ + file + makeWrapper + ]; + + # skip interactive browser check + buildFlags = "nobrowsers"; + + + preConfigure='' + configureFlagsArray=( + --with-tcltk="${tcl} ${tk_combined}" + --with-curses="${curses_combined}" + ) + export ODIN_LOCALIPC=1 + ''; + + postInstall = '' + wrapProgram "$out/bin/eli" \ + --set ODIN_LOCALIPC 1 + ''; + + # Test if eli starts + doInstallCheck = true; + installCheckPhase = '' + export HOME="$TMP/home" + mkdir -p "$HOME" + $out/bin/eli "!ls" + ''; + + meta = { + description = "Translator Construction Made Easy"; + longDescription = '' + Eli is a programming environment that supports all phases of translator + construction with extensive libraries implementing common tasks, yet handling + arbitrary special cases. Output is the C subset of C++. + ''; + homepage = http://eli-project.sourceforge.net/; + license = stdenv.lib.licenses.gpl2; + maintainers = with stdenv.lib.maintainers; [ timokau ]; + platforms = stdenv.lib.platforms.linux; + }; +} diff --git a/pkgs/development/compilers/emscripten-fastcomp/default.nix b/pkgs/development/compilers/emscripten/fastcomp/default.nix index 10c1107da026..10c1107da026 100644 --- a/pkgs/development/compilers/emscripten-fastcomp/default.nix +++ b/pkgs/development/compilers/emscripten/fastcomp/default.nix diff --git a/pkgs/development/compilers/emscripten-fastcomp/emscripten-fastcomp.nix b/pkgs/development/compilers/emscripten/fastcomp/emscripten-fastcomp.nix index 5317cf25d41b..5317cf25d41b 100644 --- a/pkgs/development/compilers/emscripten-fastcomp/emscripten-fastcomp.nix +++ b/pkgs/development/compilers/emscripten/fastcomp/emscripten-fastcomp.nix diff --git a/pkgs/development/compilers/gcc/4.8/default.nix b/pkgs/development/compilers/gcc/4.8/default.nix index 0a6ea59e5ac4..532c56d52573 100644 --- a/pkgs/development/compilers/gcc/4.8/default.nix +++ b/pkgs/development/compilers/gcc/4.8/default.nix @@ -289,7 +289,7 @@ stdenv.mkDerivation ({ # TODO(@Ericson2314): Always pass "--target" and always prefix. configurePlatforms = # TODO(@Ericson2314): Figure out what's going wrong with Arm - if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isArm + if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isAarch32 then [] else [ "build" "host" ] ++ stdenv.lib.optional (targetPlatform != hostPlatform) "target"; diff --git a/pkgs/development/compilers/gcc/4.9/default.nix b/pkgs/development/compilers/gcc/4.9/default.nix index 5dfdbd02cbfd..fb82eee4ab85 100644 --- a/pkgs/development/compilers/gcc/4.9/default.nix +++ b/pkgs/development/compilers/gcc/4.9/default.nix @@ -298,7 +298,7 @@ stdenv.mkDerivation ({ # TODO(@Ericson2314): Always pass "--target" and always prefix. configurePlatforms = # TODO(@Ericson2314): Figure out what's going wrong with Arm - if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isArm + if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isAarch32 then [] else [ "build" "host" ] ++ stdenv.lib.optional (targetPlatform != hostPlatform) "target"; diff --git a/pkgs/development/compilers/gcc/5/default.nix b/pkgs/development/compilers/gcc/5/default.nix index e42bb736676d..dee798eb09b1 100644 --- a/pkgs/development/compilers/gcc/5/default.nix +++ b/pkgs/development/compilers/gcc/5/default.nix @@ -318,7 +318,7 @@ stdenv.mkDerivation ({ # TODO(@Ericson2314): Always pass "--target" and always prefix. configurePlatforms = # TODO(@Ericson2314): Figure out what's going wrong with Arm - if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isArm + if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isAarch32 then [] else [ "build" "host" ] ++ stdenv.lib.optional (targetPlatform != hostPlatform) "target"; diff --git a/pkgs/development/compilers/gcc/6/default.nix b/pkgs/development/compilers/gcc/6/default.nix index cf71f51627c9..b99ab8fce7fb 100644 --- a/pkgs/development/compilers/gcc/6/default.nix +++ b/pkgs/development/compilers/gcc/6/default.nix @@ -322,7 +322,7 @@ stdenv.mkDerivation ({ # TODO(@Ericson2314): Always pass "--target" and always prefix. configurePlatforms = # TODO(@Ericson2314): Figure out what's going wrong with Arm - if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isArm + if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isAarch32 then [] else [ "build" "host" ] ++ stdenv.lib.optional (targetPlatform != hostPlatform) "target"; diff --git a/pkgs/development/compilers/gcc/7/default.nix b/pkgs/development/compilers/gcc/7/default.nix index 0b19aa95effe..493e50d9f327 100644 --- a/pkgs/development/compilers/gcc/7/default.nix +++ b/pkgs/development/compilers/gcc/7/default.nix @@ -327,7 +327,7 @@ stdenv.mkDerivation ({ # TODO(@Ericson2314): Always pass "--target" and always prefix. configurePlatforms = # TODO(@Ericson2314): Figure out what's going wrong with Arm - if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isArm + if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isAarch32 then [] else [ "build" "host" ] ++ stdenv.lib.optional (targetPlatform != hostPlatform) "target"; diff --git a/pkgs/development/compilers/gcc/snapshot/default.nix b/pkgs/development/compilers/gcc/snapshot/default.nix index e41e8789c9ed..d37cfac3fa85 100644 --- a/pkgs/development/compilers/gcc/snapshot/default.nix +++ b/pkgs/development/compilers/gcc/snapshot/default.nix @@ -290,7 +290,7 @@ stdenv.mkDerivation ({ # TODO(@Ericson2314): Always pass "--target" and always prefix. configurePlatforms = # TODO(@Ericson2314): Figure out what's going wrong with Arm - if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isArm + if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isAarch32 then [] else [ "build" "host" ] ++ stdenv.lib.optional (targetPlatform != hostPlatform) "target"; diff --git a/pkgs/development/compilers/ghc/7.10.3-binary.nix b/pkgs/development/compilers/ghc/7.10.3-binary.nix index c56798e31ae4..cb9f78aa0813 100644 --- a/pkgs/development/compilers/ghc/7.10.3-binary.nix +++ b/pkgs/development/compilers/ghc/7.10.3-binary.nix @@ -43,7 +43,7 @@ stdenv.mkDerivation rec { or (throw "cannot bootstrap GHC on this platform")); nativeBuildInputs = [ perl ]; - buildInputs = stdenv.lib.optionals stdenv.targetPlatform.isArm [ llvm_35 ]; + buildInputs = stdenv.lib.optionals stdenv.targetPlatform.isAarch32 [ llvm_35 ]; # Cannot patchelf beforehand due to relative RPATHs that anticipate # the final install location/ diff --git a/pkgs/development/compilers/ghc/8.2.1-binary.nix b/pkgs/development/compilers/ghc/8.2.1-binary.nix index 5cb3f2ea5ced..c88d2a8685a6 100644 --- a/pkgs/development/compilers/ghc/8.2.1-binary.nix +++ b/pkgs/development/compilers/ghc/8.2.1-binary.nix @@ -46,7 +46,7 @@ stdenv.mkDerivation rec { or (throw "cannot bootstrap GHC on this platform")); nativeBuildInputs = [ perl ]; - buildInputs = stdenv.lib.optionals (stdenv.targetPlatform.isArm || stdenv.targetPlatform.isAarch64) [ llvm_39 ]; + buildInputs = stdenv.lib.optionals (stdenv.targetPlatform.isAarch32 || stdenv.targetPlatform.isAarch64) [ llvm_39 ]; # Cannot patchelf beforehand due to relative RPATHs that anticipate # the final install location/ diff --git a/pkgs/development/compilers/ghc/8.2.2.nix b/pkgs/development/compilers/ghc/8.2.2.nix index 6520daa4d42c..192ff1ba207d 100644 --- a/pkgs/development/compilers/ghc/8.2.2.nix +++ b/pkgs/development/compilers/ghc/8.2.2.nix @@ -26,7 +26,7 @@ enableShared ? !(targetPlatform.isDarwin # On iOS, dynamic linking is not supported - && (targetPlatform.isAarch64 || targetPlatform.isArm)) + && (targetPlatform.isAarch64 || targetPlatform.isAarch32)) , # Whether to backport https://phabricator.haskell.org/D4388 for # deterministic profiling symbol names, at the cost of a slightly # non-standard GHC API @@ -109,7 +109,7 @@ stdenv.mkDerivation rec { export CC="${targetCC}/bin/${targetCC.targetPrefix}cc" export CXX="${targetCC}/bin/${targetCC.targetPrefix}cxx" # Use gold to work around https://sourceware.org/bugzilla/show_bug.cgi?id=16177 - export LD="${targetCC.bintools}/bin/${targetCC.bintools.targetPrefix}ld${stdenv.lib.optionalString targetPlatform.isArm ".gold"}" + export LD="${targetCC.bintools}/bin/${targetCC.bintools.targetPrefix}ld${stdenv.lib.optionalString targetPlatform.isAarch32 ".gold"}" export AS="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}as" export AR="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}ar" export NM="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}nm" @@ -138,7 +138,7 @@ stdenv.mkDerivation rec { "--with-iconv-includes=${libiconv}/include" "--with-iconv-libraries=${libiconv}/lib" ] ++ stdenv.lib.optionals (targetPlatform != hostPlatform) [ "--enable-bootstrap-with-devel-snapshot" - ] ++ stdenv.lib.optionals (targetPlatform.isArm) [ + ] ++ stdenv.lib.optionals (targetPlatform.isAarch32) [ "CFLAGS=-fuse-ld=gold" "CONF_GCC_LINKER_OPTS_STAGE1=-fuse-ld=gold" "CONF_GCC_LINKER_OPTS_STAGE2=-fuse-ld=gold" diff --git a/pkgs/development/compilers/ghc/8.4.1.nix b/pkgs/development/compilers/ghc/8.4.1.nix index df23f660147a..8f398458fd53 100644 --- a/pkgs/development/compilers/ghc/8.4.1.nix +++ b/pkgs/development/compilers/ghc/8.4.1.nix @@ -106,7 +106,7 @@ stdenv.mkDerivation rec { export CC="${targetCC}/bin/${targetCC.targetPrefix}cc" export CXX="${targetCC}/bin/${targetCC.targetPrefix}cxx" # Use gold to work around https://sourceware.org/bugzilla/show_bug.cgi?id=16177 - export LD="${targetCC.bintools}/bin/${targetCC.bintools.targetPrefix}ld${stdenv.lib.optionalString targetPlatform.isArm ".gold"}" + export LD="${targetCC.bintools}/bin/${targetCC.bintools.targetPrefix}ld${stdenv.lib.optionalString targetPlatform.isAarch32 ".gold"}" export AS="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}as" export AR="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}ar" export NM="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}nm" @@ -138,7 +138,7 @@ stdenv.mkDerivation rec { "--with-iconv-includes=${libiconv}/include" "--with-iconv-libraries=${libiconv}/lib" ] ++ stdenv.lib.optionals (targetPlatform != hostPlatform) [ "--enable-bootstrap-with-devel-snapshot" - ] ++ stdenv.lib.optionals (targetPlatform.isArm) [ + ] ++ stdenv.lib.optionals (targetPlatform.isAarch32) [ "CFLAGS=-fuse-ld=gold" "CONF_GCC_LINKER_OPTS_STAGE1=-fuse-ld=gold" "CONF_GCC_LINKER_OPTS_STAGE2=-fuse-ld=gold" diff --git a/pkgs/development/compilers/ghc/8.4.2.nix b/pkgs/development/compilers/ghc/8.4.2.nix index e381c411925b..cf4e57727198 100644 --- a/pkgs/development/compilers/ghc/8.4.2.nix +++ b/pkgs/development/compilers/ghc/8.4.2.nix @@ -3,7 +3,7 @@ # build-tools , bootPkgs, alex, happy -, autoconf, automake, coreutils, fetchgit, fetchpatch, perl, python3 +, autoconf, automake, coreutils, fetchurl, perl, python3 , libffi, libiconv ? null, ncurses @@ -68,13 +68,11 @@ let in stdenv.mkDerivation rec { inherit version; - inherit (src) rev; name = "${targetPrefix}ghc-${version}"; - src = fetchgit { - url = "git://git.haskell.org/ghc.git"; - rev = "6d7eecff7948ad77854f834f55b4d4f942276ad3"; - sha256 = "0aqy5x0b6qxhyvxw1q9pssf1xvhbyviglqkjrx4gvhbr3nax3wxp"; + src = fetchurl { + url = "https://downloads.haskell.org/~ghc/${version}/ghc-${version}-src.tar.xz"; + sha256 = "0yq4y0smn92sksnjjva28b8847krxizns6rm50j3pgq69br35k01"; }; enableParallelBuilding = true; @@ -93,7 +91,7 @@ stdenv.mkDerivation rec { export CC="${targetCC}/bin/${targetCC.targetPrefix}cc" export CXX="${targetCC}/bin/${targetCC.targetPrefix}cxx" # Use gold to work around https://sourceware.org/bugzilla/show_bug.cgi?id=16177 - export LD="${targetCC.bintools}/bin/${targetCC.bintools.targetPrefix}ld${stdenv.lib.optionalString targetPlatform.isArm ".gold"}" + export LD="${targetCC.bintools}/bin/${targetCC.bintools.targetPrefix}ld${stdenv.lib.optionalString targetPlatform.isAarch32 ".gold"}" export AS="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}as" export AR="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}ar" export NM="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}nm" @@ -102,9 +100,6 @@ stdenv.mkDerivation rec { export STRIP="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}strip" echo -n "${buildMK}" > mk/build.mk - echo ${version} >VERSION - echo ${src.rev} >GIT_COMMIT_ID - ./boot sed -i -e 's|-isysroot /Developer/SDKs/MacOSX10.5.sdk||' configure '' + stdenv.lib.optionalString (!stdenv.isDarwin) '' export NIX_LDFLAGS+=" -rpath $out/lib/ghc-${version}" @@ -125,7 +120,7 @@ stdenv.mkDerivation rec { "--with-iconv-includes=${libiconv}/include" "--with-iconv-libraries=${libiconv}/lib" ] ++ stdenv.lib.optionals (targetPlatform != hostPlatform) [ "--enable-bootstrap-with-devel-snapshot" - ] ++ stdenv.lib.optionals (targetPlatform.isArm) [ + ] ++ stdenv.lib.optionals (targetPlatform.isAarch32) [ "CFLAGS=-fuse-ld=gold" "CONF_GCC_LINKER_OPTS_STAGE1=-fuse-ld=gold" "CONF_GCC_LINKER_OPTS_STAGE2=-fuse-ld=gold" diff --git a/pkgs/development/compilers/ghc/head.nix b/pkgs/development/compilers/ghc/head.nix index bc3ccbdcdf51..51497e0d9cee 100644 --- a/pkgs/development/compilers/ghc/head.nix +++ b/pkgs/development/compilers/ghc/head.nix @@ -93,7 +93,7 @@ stdenv.mkDerivation rec { export CC="${targetCC}/bin/${targetCC.targetPrefix}cc" export CXX="${targetCC}/bin/${targetCC.targetPrefix}cxx" # Use gold to work around https://sourceware.org/bugzilla/show_bug.cgi?id=16177 - export LD="${targetCC.bintools}/bin/${targetCC.bintools.targetPrefix}ld${stdenv.lib.optionalString targetPlatform.isArm ".gold"}" + export LD="${targetCC.bintools}/bin/${targetCC.bintools.targetPrefix}ld${stdenv.lib.optionalString targetPlatform.isAarch32 ".gold"}" export AS="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}as" export AR="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}ar" export NM="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}nm" @@ -125,7 +125,7 @@ stdenv.mkDerivation rec { "--with-iconv-includes=${libiconv}/include" "--with-iconv-libraries=${libiconv}/lib" ] ++ stdenv.lib.optionals (targetPlatform != hostPlatform) [ "--enable-bootstrap-with-devel-snapshot" - ] ++ stdenv.lib.optionals (targetPlatform.isArm) [ + ] ++ stdenv.lib.optionals (targetPlatform.isAarch32) [ "CFLAGS=-fuse-ld=gold" "CONF_GCC_LINKER_OPTS_STAGE1=-fuse-ld=gold" "CONF_GCC_LINKER_OPTS_STAGE2=-fuse-ld=gold" diff --git a/pkgs/development/compilers/go/1.10.nix b/pkgs/development/compilers/go/1.10.nix index 7ba547552907..69184744307d 100644 --- a/pkgs/development/compilers/go/1.10.nix +++ b/pkgs/development/compilers/go/1.10.nix @@ -85,7 +85,7 @@ stdenv.mkDerivation rec { '' + optionalString stdenv.isLinux '' sed -i 's,/usr/share/zoneinfo/,${tzdata}/share/zoneinfo/,' src/time/zoneinfo_unix.go - '' + optionalString stdenv.isArm '' + '' + optionalString stdenv.isAarch32 '' sed -i '/TestCurrent/areturn' src/os/user/user_test.go echo '#!${stdenv.shell}' > misc/cgo/testplugin/test.bash '' + optionalString stdenv.isDarwin '' @@ -130,7 +130,7 @@ stdenv.mkDerivation rec { GOARCH = if stdenv.isDarwin then "amd64" else if stdenv.system == "i686-linux" then "386" else if stdenv.system == "x86_64-linux" then "amd64" - else if stdenv.isArm then "arm" + else if stdenv.isAarch32 then "arm" else if stdenv.isAarch64 then "arm64" else throw "Unsupported system"; GOARM = optionalString (stdenv.system == "armv5tel-linux") "5"; diff --git a/pkgs/development/compilers/go/1.4.nix b/pkgs/development/compilers/go/1.4.nix index b8c283fef07e..32eb0d98d188 100644 --- a/pkgs/development/compilers/go/1.4.nix +++ b/pkgs/development/compilers/go/1.4.nix @@ -130,7 +130,7 @@ stdenv.mkDerivation rec { GOARCH = if stdenv.isDarwin then "amd64" else if stdenv.system == "i686-linux" then "386" else if stdenv.system == "x86_64-linux" then "amd64" - else if stdenv.isArm then "arm" + else if stdenv.isAarch32 then "arm" else throw "Unsupported system"; GOARM = stdenv.lib.optionalString (stdenv.system == "armv5tel-linux") "5"; GO386 = 387; # from Arch: don't assume sse2 on i686 diff --git a/pkgs/development/compilers/go/1.9.nix b/pkgs/development/compilers/go/1.9.nix index 829309f94268..6a92775e0c25 100644 --- a/pkgs/development/compilers/go/1.9.nix +++ b/pkgs/development/compilers/go/1.9.nix @@ -85,7 +85,7 @@ stdenv.mkDerivation rec { '' + optionalString stdenv.isLinux '' sed -i 's,/usr/share/zoneinfo/,${tzdata}/share/zoneinfo/,' src/time/zoneinfo_unix.go - '' + optionalString stdenv.isArm '' + '' + optionalString stdenv.isAarch32 '' sed -i '/TestCurrent/areturn' src/os/user/user_test.go echo '#!${stdenv.shell}' > misc/cgo/testplugin/test.bash '' + optionalString stdenv.isDarwin '' @@ -132,7 +132,7 @@ stdenv.mkDerivation rec { GOARCH = if stdenv.isDarwin then "amd64" else if stdenv.system == "i686-linux" then "386" else if stdenv.system == "x86_64-linux" then "amd64" - else if stdenv.isArm then "arm" + else if stdenv.isAarch32 then "arm" else if stdenv.isAarch64 then "arm64" else throw "Unsupported system"; GOARM = optionalString (stdenv.system == "armv5tel-linux") "5"; diff --git a/pkgs/development/compilers/haxe/default.nix b/pkgs/development/compilers/haxe/default.nix index a420949711e0..afeef2b3637c 100644 --- a/pkgs/development/compilers/haxe/default.nix +++ b/pkgs/development/compilers/haxe/default.nix @@ -53,6 +53,24 @@ let dontStrip = true; + # While it might be a good idea to run the upstream test suite, let's at + # least make sure we can actually run the compiler. + doInstallCheck = true; + installCheckPhase = '' + # Get out of the source directory to make sure the stdlib from the + # sources doesn't interfere with the installed one. + mkdir installcheck + pushd installcheck > /dev/null + cat >> InstallCheck.hx <<EOF + class InstallCheck { + public static function main() trace("test"); + } + EOF + "$out/bin/haxe" -js installcheck.js -main InstallCheck + grep -q 'console\.log.*test' installcheck.js + popd > /dev/null + ''; + meta = with stdenv.lib; { description = "Programming language targeting JavaScript, Flash, NekoVM, PHP, C++"; homepage = https://haxe.org; @@ -75,7 +93,7 @@ in { version = "3.4.6"; sha256 = "1myc4b8fwp0f9vky17wv45n34a583f5sjvajsc93f5gm1wanp4if"; prePatch = '' - sed -i -e 's|"/usr/lib/haxe/std/";|"'"$out/lib/haxe/std/"'";\n&|g' src/main.ml + sed -i -re 's!(let +prefix_path += +).*( +in)!\1"'"$out/"'"\2!' src/main.ml sed -i -e 's|"neko"|"${neko}/bin/neko"|g' extra/haxelib_src/src/haxelib/client/Main.hx ''; }; diff --git a/pkgs/development/compilers/julia/default.nix b/pkgs/development/compilers/julia/default.nix index a263703ffa5d..b5a3a8c6be2d 100644 --- a/pkgs/development/compilers/julia/default.nix +++ b/pkgs/development/compilers/julia/default.nix @@ -164,6 +164,7 @@ stdenv.mkDerivation rec { license = stdenv.lib.licenses.mit; maintainers = with stdenv.lib.maintainers; [ raskin ]; platforms = [ "i686-linux" "x86_64-linux" "x86_64-darwin" ]; - broken = stdenv.isi686; + #broken = stdenv.isi686; + broken = true; # 2018-04-10 }; } diff --git a/pkgs/development/compilers/kotlin/default.nix b/pkgs/development/compilers/kotlin/default.nix index 62c1c2c96708..d5ce240b4a5f 100644 --- a/pkgs/development/compilers/kotlin/default.nix +++ b/pkgs/development/compilers/kotlin/default.nix @@ -1,14 +1,14 @@ { stdenv, fetchurl, makeWrapper, jre, unzip }: let - version = "1.2.31"; + version = "1.2.40"; in stdenv.mkDerivation rec { inherit version; name = "kotlin-${version}"; src = fetchurl { url = "https://github.com/JetBrains/kotlin/releases/download/v${version}/kotlin-compiler-${version}.zip"; - sha256 = "09l0vjff9kkiprf5irgq1sb9cils8plbzbrf55ajj8m5fyxcd6fs"; + sha256 = "0n4na0ddnjgc573szk5bpd34v5gib71pah62xq7vwdf34q8mg61l"; }; propagatedBuildInputs = [ jre ] ; diff --git a/pkgs/development/compilers/mono/4.0.nix b/pkgs/development/compilers/mono/4.0.nix index 8621751e5a14..f13883db74ff 100644 --- a/pkgs/development/compilers/mono/4.0.nix +++ b/pkgs/development/compilers/mono/4.0.nix @@ -3,4 +3,7 @@ callPackage ./generic.nix (rec { inherit Foundation libobjc; version = "4.0.4.1"; sha256 = "1ydw9l89apc9p7xr5mdzy0h97g2q6v243g82mxswfc2rrqhfs4gd"; + meta = { + knownVulnerabilities = [ "CVE-2009-0689" ]; + }; }) diff --git a/pkgs/development/compilers/mono/generic.nix b/pkgs/development/compilers/mono/generic.nix index 3b476bce0273..a62f2f24dd87 100644 --- a/pkgs/development/compilers/mono/generic.nix +++ b/pkgs/development/compilers/mono/generic.nix @@ -5,13 +5,15 @@ , version, sha256 , withLLVM ? false , enableParallelBuilding ? true +, meta ? {} }: let llvm = callPackage ./llvm.nix { }; -in -stdenv.mkDerivation rec { name = "mono-${version}"; +in +stdenv.mkDerivation { + inherit name; src = fetchurl { inherit sha256; @@ -91,5 +93,5 @@ stdenv.mkDerivation rec { platforms = stdenv.lib.platforms.x86; maintainers = with stdenv.lib.maintainers; [ viric thoughtpolice obadz vrthra ]; license = stdenv.lib.licenses.free; # Combination of LGPL/X11/GPL ? - }; + } // meta; } diff --git a/pkgs/development/compilers/ocaml/3.12.1.nix b/pkgs/development/compilers/ocaml/3.12.1.nix index c69554e633a9..8cfe2bb7bcfe 100644 --- a/pkgs/development/compilers/ocaml/3.12.1.nix +++ b/pkgs/development/compilers/ocaml/3.12.1.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, ncurses, xlibsWrapper }: let - useX11 = !stdenv.isArm && !stdenv.isMips; + useX11 = !stdenv.isAarch32 && !stdenv.isMips; useNativeCompilers = !stdenv.isMips; inherit (stdenv.lib) optionals optionalString; in diff --git a/pkgs/development/compilers/ocaml/4.00.1.nix b/pkgs/development/compilers/ocaml/4.00.1.nix index 648ef0d91f9e..8bad5494e8b9 100644 --- a/pkgs/development/compilers/ocaml/4.00.1.nix +++ b/pkgs/development/compilers/ocaml/4.00.1.nix @@ -1,7 +1,7 @@ { stdenv, fetchurl, ncurses, xlibsWrapper }: let - useX11 = !stdenv.isArm && !stdenv.isMips; + useX11 = !stdenv.isAarch32 && !stdenv.isMips; useNativeCompilers = !stdenv.isMips; inherit (stdenv.lib) optionals optionalString; in diff --git a/pkgs/development/compilers/ocaml/4.07.nix b/pkgs/development/compilers/ocaml/4.07.nix new file mode 100644 index 000000000000..b39d57cc092b --- /dev/null +++ b/pkgs/development/compilers/ocaml/4.07.nix @@ -0,0 +1,9 @@ +import ./generic.nix { + major_version = "4"; + minor_version = "07"; + patch_version = "0+beta2"; + sha256 = "0rrvl47kq982z2ns7cnasmlbj60mpmza2zyhl1kh45c5a3n7692n"; + + # If the executable is stripped it does not work + dontStrip = true; +} diff --git a/pkgs/development/compilers/ocaml/generic.nix b/pkgs/development/compilers/ocaml/generic.nix index 03ae6e518d0b..1ee6fee613c9 100644 --- a/pkgs/development/compilers/ocaml/generic.nix +++ b/pkgs/development/compilers/ocaml/generic.nix @@ -7,7 +7,7 @@ let real_url = if url == null then "http://caml.inria.fr/pub/distrib/ocaml-${versionNoPatch}/ocaml-${version}.tar.xz" else url; - safeX11 = stdenv: !(stdenv.isArm || stdenv.isMips); + safeX11 = stdenv: !(stdenv.isAarch32 || stdenv.isMips); in { stdenv, fetchurl, ncurses, buildEnv @@ -15,7 +15,7 @@ in , flambdaSupport ? false }: -assert useX11 -> !stdenv.isArm && !stdenv.isMips; +assert useX11 -> !stdenv.isAarch32 && !stdenv.isMips; assert flambdaSupport -> stdenv.lib.versionAtLeast version "4.03"; let @@ -45,7 +45,8 @@ stdenv.mkDerivation (args // rec { ; buildFlags = "world" + optionalString useNativeCompilers " bootstrap world.opt"; - buildInputs = [ncurses] ++ optionals useX11 [ libX11 xproto ]; + buildInputs = optional (!stdenv.lib.versionAtLeast version "4.07") ncurses + ++ optionals useX11 [ libX11 xproto ]; installTargets = "install" + optionalString useNativeCompilers " installopt"; preConfigure = optionalString (!stdenv.lib.versionAtLeast version "4.04") '' CAT=$(type -tp cat) diff --git a/pkgs/development/compilers/openjdk-darwin/8.nix b/pkgs/development/compilers/openjdk/darwin/8.nix index cc7c5fd371d2..cc7c5fd371d2 100644 --- a/pkgs/development/compilers/openjdk-darwin/8.nix +++ b/pkgs/development/compilers/openjdk/darwin/8.nix diff --git a/pkgs/development/compilers/openjdk-darwin/default.nix b/pkgs/development/compilers/openjdk/darwin/default.nix index 6ecc785be3b9..6ecc785be3b9 100644 --- a/pkgs/development/compilers/openjdk-darwin/default.nix +++ b/pkgs/development/compilers/openjdk/darwin/default.nix diff --git a/pkgs/development/compilers/oraclejdk/jdk10-linux.nix b/pkgs/development/compilers/oraclejdk/jdk10-linux.nix index 1d06f122b235..642c17dc6d3f 100644 --- a/pkgs/development/compilers/oraclejdk/jdk10-linux.nix +++ b/pkgs/development/compilers/oraclejdk/jdk10-linux.nix @@ -29,7 +29,7 @@ assert stdenv.system == "x86_64-linux"; assert swingSupport -> xorg != null; let - version = "10"; + version = "10.0.1"; downloadUrlBase = http://www.oracle.com/technetwork/java/javase/downloads; @@ -52,19 +52,19 @@ let result = stdenv.mkDerivation rec { requireFile { name = "jdk-${version}_linux-x64_bin.tar.gz"; url = "${downloadUrlBase}/jdk10-downloads-4416644.html"; - sha256 = "0338m0x5lka0xjsbcll70r1i308bjw3m42cm9dx9zmfk70kplj5c"; + sha256 = "1975s6cn2lxb8jmxp236afvq6hhxqrx5jix8aqm46f5gwr2xd3mf"; } else if packageType == "JRE" then requireFile { name = "jre-${version}_linux-x64_bin.tar.gz"; url = "${downloadUrlBase}/jre10-downloads-4417026.html"; - sha256 = "1clawcahkla1h9pxnqfqzcgv51aqgq78v1ws5jygbk6fbbi7l54w"; + sha256 = "11pb8cwzmalc6ax735m84g13jh1mrfc8g84b5qypnmqjjdv6fpiq"; } else if packageType == "ServerJRE" then requireFile { name = "serverjre-${version}_linux-x64_bin.tar.gz"; url = "${downloadUrlBase}/sjre10-downloads-4417025.html"; - sha256 = "0kiyg33fv29ad0nyl35r7y0bhyxivb2hxlds44m9l0259s55nwhw"; + sha256 = "0hvfqgr22sq9zyqc496vqgg5ail189h3a4pazp39i8n86brd48lw"; } else abort "unknown package Type ${packageType}"; diff --git a/pkgs/development/compilers/oraclejdk/jdk8cpu-linux.nix b/pkgs/development/compilers/oraclejdk/jdk8cpu-linux.nix index 5bafa70af9fc..bdd367ef3523 100644 --- a/pkgs/development/compilers/oraclejdk/jdk8cpu-linux.nix +++ b/pkgs/development/compilers/oraclejdk/jdk8cpu-linux.nix @@ -1,11 +1,11 @@ import ./jdk-linux-base.nix { productVersion = "8"; - patchVersion = "161"; + patchVersion = "171"; downloadUrl = http://www.oracle.com/technetwork/java/javase/downloads/jdk8-downloads-2133151.html; - sha256.i686-linux = "1p6p93msn3bsg9775rq171kd4160w4w8z57p0qpjdjycfix62sfg"; - sha256.x86_64-linux = "07h2wah80qr78y0f821z12lbdmsv90xbckdn3glnj2riwfh5dg3d"; - sha256.armv7l-linux = "0mngw2lnhx3hzgp444advybhjn5hjk3mi14y72km4kp03gh82a7x"; - sha256.aarch64-linux = "18l5fny7yxhpj5c935rnlq4pvwadyr5zkid6yh9x87frl401shy7"; + sha256.i686-linux = "0dh5r02v40pinway952fflw2r0i1xi67hmyb87c278qfp4jn929p"; + sha256.x86_64-linux = "10jr4z0bw9wcws5xgc4qkw101cadfx5bkyvcnc4l3v5axwvjipdn"; + sha256.armv7l-linux = "1bqivmp1wfnypgg5bsfzi25yzl7vd2xncfap9mi8jn63aj633dw0"; + sha256.aarch64-linux = "1016lf3g1syjsl29m58s2s2w9nkj4jkvxhqg4s35vy41cs2v77j7"; jceName = "jce_policy-8.zip"; jceDownloadUrl = http://www.oracle.com/technetwork/java/javase/downloads/jce8-download-2133166.html; sha256JCE = "0n8b6b8qmwb14lllk2lk1q1ahd3za9fnjigz5xn65mpg48whl0pk"; diff --git a/pkgs/development/compilers/oraclejdk/jdk8psu-linux.nix b/pkgs/development/compilers/oraclejdk/jdk8psu-linux.nix index 78d5a6f2c40c..901eea0f8f15 100644 --- a/pkgs/development/compilers/oraclejdk/jdk8psu-linux.nix +++ b/pkgs/development/compilers/oraclejdk/jdk8psu-linux.nix @@ -1,11 +1,11 @@ import ./jdk-linux-base.nix { productVersion = "8"; - patchVersion = "162"; + patchVersion = "172"; downloadUrl = http://www.oracle.com/technetwork/java/javase/downloads/jdk8-downloads-2133151.html; - sha256.i686-linux = "097vlvvj1vr7815rgarf5x97lagi4q0kai0x4lvd4y3wrzdqikzf"; - sha256.x86_64-linux = "0mq2d0lj53gzn4qqdjdgbwl0h857k2rnsnr2hkmvihnrgza85v38"; - sha256.armv7l-linux = "0xzsgdmpgs1n1g70hgly0mpxflhjrmq3vxwx8gl0kmqdiv4hqwjp"; - sha256.aarch64-linux = "19ykcsmvkf7sdq2lqwvyi60nhb8v7f88dqjycimrsar9y4r7skf8"; + sha256.i686-linux = "0csskx8xis0dr1948j76fgrwwsj4gzdbjqfi7if4v4j62b9i0hqa"; + sha256.x86_64-linux = "0inkx73rwv7cvn9lqcr3hmnm0sr89h1fh29yamikb4dn02a0p818"; + sha256.armv7l-linux = "1576cb0rlc42dsnmh388gy1wjas7ac6g135s8h74x8sm4b56qpln"; + sha256.aarch64-linux = "0zpkmq8zxmpifawj611fg67srki63haz02rm6xwfc5qm2lxx5g6s"; jceName = "jce_policy-8.zip"; jceDownloadUrl = http://www.oracle.com/technetwork/java/javase/downloads/jce8-download-2133166.html; sha256JCE = "0n8b6b8qmwb14lllk2lk1q1ahd3za9fnjigz5xn65mpg48whl0pk"; diff --git a/pkgs/development/compilers/rust/default.nix b/pkgs/development/compilers/rust/default.nix index d9a36273ce1d..f191515b745c 100644 --- a/pkgs/development/compilers/rust/default.nix +++ b/pkgs/development/compilers/rust/default.nix @@ -20,11 +20,15 @@ in rec { configureFlags = [ "--release-channel=stable" ]; + # 1. Upstream is not running tests on aarch64: + # see https://github.com/rust-lang/rust/issues/49807#issuecomment-380860567 + # So we do the same. + # 2. Tests run out of memory for i686 + doCheck = !stdenv.isAarch64 && !stdenv.isi686; + patches = [ ./patches/0001-Disable-fragile-tests-libstd-net-tcp-on-Darwin-Linux.patch - ] ++ stdenv.lib.optional stdenv.needsPax ./patches/grsec.patch - # https://github.com/rust-lang/rust/issues/45410 - ++ stdenv.lib.optional stdenv.isAarch64 ./patches/aarch64-disable-test_loading_cosine.patch; + ] ++ stdenv.lib.optional stdenv.needsPax ./patches/grsec.patch; }; diff --git a/pkgs/development/compilers/rust/patches/aarch64-disable-test_loading_cosine.patch b/pkgs/development/compilers/rust/patches/aarch64-disable-test_loading_cosine.patch deleted file mode 100644 index bafab0e9ef71..000000000000 --- a/pkgs/development/compilers/rust/patches/aarch64-disable-test_loading_cosine.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff --git a/src/librustc_metadata/dynamic_lib.rs b/src/librustc_metadata/dynamic_lib.rs -index 1b42fa0..92256dc 100644 ---- a/src/librustc_metadata/dynamic_lib.rs -+++ b/src/librustc_metadata/dynamic_lib.rs -@@ -80,6 +80,7 @@ mod tests { - use std::mem; - - #[test] -+ #[ignore] - fn test_loading_cosine() { - if cfg!(windows) { - return diff --git a/pkgs/development/compilers/rust/rustc.nix b/pkgs/development/compilers/rust/rustc.nix index bb0794aeb84e..19c4a590e454 100644 --- a/pkgs/development/compilers/rust/rustc.nix +++ b/pkgs/development/compilers/rust/rustc.nix @@ -53,6 +53,7 @@ stdenv.mkDerivation { RUSTFLAGS = "-Ccodegen-units=10"; # We need rust to build rust. If we don't provide it, configure will try to download it. + # Reference: https://github.com/rust-lang/rust/blob/master/src/bootstrap/configure.py configureFlags = configureFlags ++ [ "--enable-local-rust" "--local-rust-root=${rustPlatform.rust.rustc}" "--enable-rpath" ] ++ [ "--enable-vendor" ] @@ -62,6 +63,13 @@ stdenv.mkDerivation { ++ optional (targets != []) "--target=${target}" ++ optional (!forceBundledLLVM) "--llvm-root=${llvmShared}"; + # The boostrap.py will generated a Makefile that then executes the build. + # The BOOTSTRAP_ARGS used by this Makefile must include all flags to pass + # to the bootstrap builder. + postConfigure = '' + substituteInPlace Makefile --replace 'BOOTSTRAP_ARGS :=' 'BOOTSTRAP_ARGS := --jobs $(NIX_BUILD_CORES)' + ''; + patches = patches ++ targetPatches; # the rust build system complains that nix alters the checksums @@ -100,9 +108,6 @@ stdenv.mkDerivation { # Useful debugging parameter # export VERBOSE=1 - '' + optionalString stdenv.isAarch64 '' - # https://github.com/rust-lang/rust/issues/49807 - rm -vr src/test/debuginfo/by-value-self-argument-in-trait-impl.rs '' + optionalString stdenv.isDarwin '' # Disable all lldb tests. # error: Can't run LLDB test because LLDB's python path is not set diff --git a/pkgs/development/compilers/sbcl/bootstrap.nix b/pkgs/development/compilers/sbcl/bootstrap.nix index 707f7966dd9b..529123398a57 100644 --- a/pkgs/development/compilers/sbcl/bootstrap.nix +++ b/pkgs/development/compilers/sbcl/bootstrap.nix @@ -65,7 +65,7 @@ stdenv.mkDerivation rec { --add-flags "--core $out/share/sbcl/sbcl.core" ''; - postFixup = stdenv.lib.optionalString (!stdenv.isArm && stdenv.isLinux) '' + postFixup = stdenv.lib.optionalString (!stdenv.isAarch32 && stdenv.isLinux) '' patchelf --set-interpreter $(cat $NIX_CC/nix-support/dynamic-linker) $out/share/sbcl/sbcl ''; diff --git a/pkgs/development/compilers/sbcl/default.nix b/pkgs/development/compilers/sbcl/default.nix index 0da3e9f0fd1d..29a192fcff24 100644 --- a/pkgs/development/compilers/sbcl/default.nix +++ b/pkgs/development/compilers/sbcl/default.nix @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { (setf features (remove x features)))) '' + (if threadSupport then "(enable :sb-thread)" else "(disable :sb-thread)") - + stdenv.lib.optionalString stdenv.isArm "(enable :arm)" + + stdenv.lib.optionalString stdenv.isAarch32 "(enable :arm)" + '' )) " > customize-target-features.lisp diff --git a/pkgs/development/compilers/yosys/default.nix b/pkgs/development/compilers/yosys/default.nix index 568c94718e7f..c20bffe26ed1 100644 --- a/pkgs/development/compilers/yosys/default.nix +++ b/pkgs/development/compilers/yosys/default.nix @@ -35,14 +35,18 @@ stdenv.mkDerivation rec { buildInputs = [ tcl readline libffi python3 bison flex ]; patchPhase = '' + substituteInPlace ../yosys-abc/Makefile \ + --replace 'CC := gcc' "" substituteInPlace ./Makefile \ + --replace 'CXX = clang' "" \ + --replace 'ABCMKARGS = CC="$(CXX)"' 'ABCMKARGS =' \ --replace 'echo UNKNOWN' 'echo ${substring 0 10 (elemAt srcs 0).rev}' ''; preBuild = '' chmod -R u+w ../yosys-abc ln -s ../yosys-abc abc - make config-gcc + make config-${if stdenv.cc.isClang or false then "clang" else "gcc"} echo 'ABCREV := default' >> Makefile.conf makeFlags="PREFIX=$out $makeFlags" ''; @@ -61,6 +65,6 @@ stdenv.mkDerivation rec { homepage = http://www.clifford.at/yosys/; license = stdenv.lib.licenses.isc; maintainers = with stdenv.lib.maintainers; [ shell thoughtpolice ]; - platforms = stdenv.lib.platforms.linux; + platforms = stdenv.lib.platforms.unix; }; } diff --git a/pkgs/development/em-modules/generic/default.nix b/pkgs/development/em-modules/generic/default.nix index 332fab8e14aa..f03e6e42739a 100644 --- a/pkgs/development/em-modules/generic/default.nix +++ b/pkgs/development/em-modules/generic/default.nix @@ -22,8 +22,6 @@ pkgs.stdenv.mkDerivation ( HOME=$TMPDIR runHook preConfigure - # probably requires autotools as dependency - ./autogen.sh emconfigure ./configure --prefix=$out runHook postConfigure diff --git a/pkgs/development/haskell-modules/configuration-common.nix b/pkgs/development/haskell-modules/configuration-common.nix index a3efc1e373b5..e4f2d6728640 100644 --- a/pkgs/development/haskell-modules/configuration-common.nix +++ b/pkgs/development/haskell-modules/configuration-common.nix @@ -932,11 +932,11 @@ self: super: { JuicyPixels = dontHaddock super.JuicyPixels; # aarch64 and armv7l fixes. - happy = if (pkgs.stdenv.hostPlatform.isArm || pkgs.stdenv.hostPlatform.isAarch64) then dontCheck super.happy else super.happy; # Similar to https://ghc.haskell.org/trac/ghc/ticket/13062 - hashable = if (pkgs.stdenv.hostPlatform.isArm || pkgs.stdenv.hostPlatform.isAarch64) then dontCheck super.hashable else super.hashable; # https://github.com/tibbe/hashable/issues/95 - servant-docs = if (pkgs.stdenv.hostPlatform.isArm || pkgs.stdenv.hostPlatform.isAarch64) then dontCheck super.servant-docs else super.servant-docs; - servant-swagger = if (pkgs.stdenv.hostPlatform.isArm || pkgs.stdenv.hostPlatform.isAarch64) then dontCheck super.servant-swagger else super.servant-swagger; - swagger2 = if (pkgs.stdenv.hostPlatform.isArm || pkgs.stdenv.hostPlatform.isAarch64) then dontHaddock (dontCheck super.swagger2) else super.swagger2; + happy = if (pkgs.stdenv.hostPlatform.isAarch32 || pkgs.stdenv.hostPlatform.isAarch64) then dontCheck super.happy else super.happy; # Similar to https://ghc.haskell.org/trac/ghc/ticket/13062 + hashable = if (pkgs.stdenv.hostPlatform.isAarch32 || pkgs.stdenv.hostPlatform.isAarch64) then dontCheck super.hashable else super.hashable; # https://github.com/tibbe/hashable/issues/95 + servant-docs = if (pkgs.stdenv.hostPlatform.isAarch32 || pkgs.stdenv.hostPlatform.isAarch64) then dontCheck super.servant-docs else super.servant-docs; + servant-swagger = if (pkgs.stdenv.hostPlatform.isAarch32 || pkgs.stdenv.hostPlatform.isAarch64) then dontCheck super.servant-swagger else super.servant-swagger; + swagger2 = if (pkgs.stdenv.hostPlatform.isAarch32 || pkgs.stdenv.hostPlatform.isAarch64) then dontHaddock (dontCheck super.swagger2) else super.swagger2; # Tries to read a file it is not allowed to in the test suite load-env = dontCheck super.load-env; @@ -1020,6 +1020,14 @@ self: super: { preCheck = ''export PATH="$PWD/dist/build/alex:$PATH"''; }); + # This package refers to the wrong library (itself in fact!) + vulkan = super.vulkan.override { vulkan = pkgs.vulkan-loader; }; + + # Builds only with the latest version of indexed-list-literals. + vector-sized_1_0_1_0 = super.vector-sized_1_0_1_0.override { + indexed-list-literals = self.indexed-list-literals_0_2_0_0; + }; + } // diff --git a/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix b/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix index 7538c3697412..fe6bc699fb98 100644 --- a/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix +++ b/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix @@ -48,11 +48,6 @@ self: super: { bv = super.bv_0_5; ## Needs bump to a versioned attribute - ## Setup: Encountered missing dependencies: - ## template-haskell >=2.5 && <2.13 - deriving-compat = super.deriving-compat_0_4_1; - - ## Needs bump to a versioned attribute ## Issue: https://github.com/sol/doctest/issues/189 doctest = overrideCabal super.doctest_0_15_0 (drv: { ## Setup: Encountered missing dependencies: @@ -583,7 +578,7 @@ self: super: { }); # Older versions don't compile. - brick = self.brick_0_36; + brick = self.brick_0_36_2; HaTeX = self.HaTeX_3_19_0_0; matrix = self.matrix_0_3_6_1; pandoc = self.pandoc_2_1_3; diff --git a/pkgs/development/haskell-modules/configuration-hackage2nix.yaml b/pkgs/development/haskell-modules/configuration-hackage2nix.yaml index 7b982cb7781b..5e12e90a3c3d 100644 --- a/pkgs/development/haskell-modules/configuration-hackage2nix.yaml +++ b/pkgs/development/haskell-modules/configuration-hackage2nix.yaml @@ -38,7 +38,7 @@ core-packages: - ghcjs-base-0 default-package-overrides: - # LTS Haskell 11.4 + # LTS Haskell 11.6 - abstract-deque ==0.3 - abstract-deque-tests ==0.3 - abstract-par ==0.3.3 @@ -69,10 +69,10 @@ default-package-overrides: - aeson-compat ==0.3.7.1 - aeson-diff ==1.1.0.4 - aeson-extra ==0.4.1.0 - - aeson-generic-compat ==0.0.1.1 + - aeson-generic-compat ==0.0.1.2 - aeson-injector ==1.1.0.0 - aeson-picker ==0.1.0.4 - - aeson-pretty ==0.8.5 + - aeson-pretty ==0.8.7 - aeson-qq ==0.8.2 - aeson-typescript ==0.1.0.6 - aeson-utils ==0.3.0.2 @@ -83,10 +83,10 @@ default-package-overrides: - alerts ==0.1.0.0 - alex ==3.2.4 - algebra ==4.3.1 - - algebraic-graphs ==0.0.5 + - algebraic-graphs ==0.1.1.1 - alsa-core ==0.5.0.1 - alsa-mixer ==0.2.0.3 - - alsa-pcm ==0.6.0.4 + - alsa-pcm ==0.6.1 - alsa-seq ==0.6.0.7 - alternative-vector ==0.0.0 - alternators ==0.1.2.0 @@ -132,7 +132,7 @@ default-package-overrides: - attoparsec-path ==0.0.0.1 - attoparsec-time ==1 - attoparsec-uri ==0.0.4 - - audacity ==0.0.1.2 + - audacity ==0.0.2 - authenticate ==1.3.4 - authenticate-oauth ==1.6 - auto ==0.4.3.1 @@ -140,8 +140,8 @@ default-package-overrides: - auto-update ==0.1.4 - avwx ==0.3.0.2 - axiom ==0.4.6 - - b9 ==0.5.43 - - backprop ==0.1.5.0 + - b9 ==0.5.47 + - backprop ==0.1.5.1 - bank-holidays-england ==0.1.0.6 - barrier ==0.1.1 - base16-bytestring ==0.1.1.6 @@ -157,6 +157,9 @@ default-package-overrides: - basic-prelude ==0.7.0 - bbdb ==0.8 - bcrypt ==0.0.11 + - beam-core ==0.7.2.0 + - beam-migrate ==0.3.1.0 + - beam-sqlite ==0.3.2.0 - bench ==1.0.9 - benchpress ==0.2.2.10 - bencode ==0.6.0.0 @@ -178,7 +181,7 @@ default-package-overrides: - binary-shared ==0.8.3 - binary-tagged ==0.1.4.2 - bindings-DSL ==1.0.24 - - bindings-GLFW ==3.1.2.3 + - bindings-GLFW ==3.1.2.4 - bindings-libzip ==1.0.1 - bindings-uname ==0.1 - bioace ==0.0.1 @@ -207,7 +210,7 @@ default-package-overrides: - blaze-bootstrap ==0.1.0.1 - blaze-builder ==0.4.1.0 - blaze-html ==0.9.0.1 - - blaze-markup ==0.8.2.0 + - blaze-markup ==0.8.2.1 - blaze-svg ==0.3.6.1 - blaze-textual ==0.2.1.0 - bloodhound ==0.15.0.2 @@ -260,7 +263,7 @@ default-package-overrides: - cabal-rpm ==0.12.2 - cabal-toolkit ==0.0.5 - cache ==0.1.1.0 - - cairo ==0.13.4.2 + - cairo ==0.13.5.0 - calendar-recycling ==0.0 - call-stack ==0.1.0 - capataz ==0.1.0.1 @@ -288,12 +291,12 @@ default-package-overrides: - Chart-cairo ==1.8.3 - chaselev-deque ==0.5.0.5 - ChasingBottoms ==1.3.1.4 - - chatwork ==0.1.3.1 + - chatwork ==0.1.3.2 - cheapskate ==0.1.1 - cheapskate-highlight ==0.1.0.0 - cheapskate-lucid ==0.1.0.0 - check-email ==1.0.2 - - checkers ==0.4.9.5 + - checkers ==0.4.10 - choice ==0.2.2 - chunked-data ==0.3.1 - cipher-aes ==0.2.11 @@ -462,13 +465,13 @@ default-package-overrides: - data-serializer ==0.3.4 - datasets ==0.2.5 - data-textual ==0.3.0.2 - - data-tree-print ==0.1.0.0 + - data-tree-print ==0.1.0.1 - dataurl ==0.1.0.0 - DAV ==1.3.2 - dawg-ord ==0.5.1.0 - dbcleaner ==0.1.3 - dbus ==0.10.15 - - debian-build ==0.10.1.0 + - debian-build ==0.10.1.1 - debug ==0.1.1 - Decimal ==0.5.1 - declarative ==0.5.2 @@ -551,8 +554,8 @@ default-package-overrides: - ekg ==0.4.0.15 - ekg-core ==0.1.1.4 - ekg-json ==0.1.0.6 - - ekg-statsd ==0.2.2.0 - - ekg-wai ==0.1.0.2 + - ekg-statsd ==0.2.3.0 + - ekg-wai ==0.1.0.3 - elerea ==2.9.0 - eliminators ==0.3 - elm-core-sources ==1.0.0 @@ -607,7 +610,7 @@ default-package-overrides: - extensible ==0.4.8 - extensible-effects ==2.4.0.0 - extensible-exceptions ==0.1.1.4 - - extra ==1.6.5 + - extra ==1.6.6 - extractable-singleton ==0.0.1 - extrapolate ==0.3.1 - fail ==4.9.0.0 @@ -663,7 +666,7 @@ default-package-overrides: - ForestStructures ==0.0.0.2 - forma ==0.2.0 - format-numbers ==0.1.0.0 - - formatting ==6.3.2 + - formatting ==6.3.4 - foundation ==0.0.20 - FPretty ==1.1 - Frames ==0.3.0.2 @@ -731,10 +734,10 @@ default-package-overrides: - ghc-paths ==0.1.0.9 - ghc-prof ==1.4.1.1 - ghc-syb-utils ==0.2.3.3 - - ghc-tcplugins-extra ==0.2.4 + - ghc-tcplugins-extra ==0.2.5 - ghc-typelits-extra ==0.2.4 - - ghc-typelits-knownnat ==0.4.1 - - ghc-typelits-natnormalise ==0.5.9 + - ghc-typelits-knownnat ==0.4.2 + - ghc-typelits-natnormalise ==0.5.10 - ghost-buster ==0.1.1.0 - gi-atk ==2.0.15 - gi-cairo ==1.0.15 @@ -755,8 +758,8 @@ default-package-overrides: - glaze ==0.3.0.1 - glazier ==0.11.0.1 - glazier-pipes ==0.1.5.1 - - GLFW-b ==1.4.8.1 - - glib ==0.13.5.0 + - GLFW-b ==1.4.8.3 + - glib ==0.13.6.0 - Glob ==0.9.2 - glob-posix ==0.1.0.1 - gloss ==1.11.1.1 @@ -768,7 +771,7 @@ default-package-overrides: - GLURaw ==2.0.0.4 - GLUT ==2.7.0.13 - gluturtle ==0.0.58.1 - - gnuplot ==0.5.5.1 + - gnuplot ==0.5.5.2 - goggles ==0.3.2 - google-cloud ==0.0.4 - google-oauth2-jwt ==0.2.2 @@ -789,7 +792,7 @@ default-package-overrides: - group-by-date ==0.1.0.2 - grouped-list ==0.2.2.0 - groups ==0.4.1.0 - - gtk2hs-buildtools ==0.13.3.1 + - gtk2hs-buildtools ==0.13.4.0 - H ==0.9.0.1 - h2c ==1.0.0 - hackage-db ==2.0 @@ -802,7 +805,7 @@ default-package-overrides: - hamilton ==0.1.0.2 - HandsomeSoup ==0.4.2 - handwriting ==0.1.0.3 - - hapistrano ==0.3.5.3 + - hapistrano ==0.3.5.4 - happstack-jmacro ==7.0.12 - happstack-server ==7.5.1 - happstack-server-tls ==7.1.6.5 @@ -814,8 +817,8 @@ default-package-overrides: - hashmap ==1.3.3 - hashtables ==1.2.3.0 - haskeline ==0.7.4.2 - - haskell-gi ==0.21.0 - - haskell-gi-base ==0.21.0 + - haskell-gi ==0.21.2 + - haskell-gi-base ==0.21.1 - haskell-gi-overloading ==0.0 - haskell-lexer ==1.0.1 - haskell-lsp ==0.2.0.1 @@ -855,7 +858,7 @@ default-package-overrides: - HDBC-mysql ==0.7.1.0 - HDBC-session ==0.1.1.1 - hdevtools ==0.1.6.1 - - heap ==1.0.3 + - heap ==1.0.4 - heaps ==0.3.6 - heatshrink ==0.1.0.0 - hebrew-time ==0.1.1 @@ -928,8 +931,8 @@ default-package-overrides: - hsdns ==1.7.1 - hsebaysdk ==0.4.0.0 - hsemail ==2 - - HSet ==0.0.1 - hset ==2.2.0 + - HSet ==0.0.1 - hsexif ==0.6.1.5 - hs-GeoIP ==0.3 - hsignal ==0.2.7.5 @@ -979,12 +982,12 @@ default-package-overrides: - HTTP ==4000.3.11 - http2 ==1.6.3 - http-api-data ==0.3.7.2 - - http-client ==0.5.12 + - http-client ==0.5.12.1 - http-client-openssl ==0.2.1.1 - http-client-tls ==0.3.5.3 - http-common ==0.8.2.0 - - http-conduit ==2.3.0 - - http-date ==0.0.6.1 + - http-conduit ==2.3.1 + - http-date ==0.0.7 - http-link-header ==1.0.3 - http-media ==0.7.1.2 - http-reverse-proxy ==0.5.0.1 @@ -1004,13 +1007,13 @@ default-package-overrides: - hw-fingertree ==0.1.0.1 - hw-fingertree-strict ==0.1.0.3 - hw-hedgehog ==0.1.0.1 - - hw-hspec-hedgehog ==0.1.0.3 + - hw-hspec-hedgehog ==0.1.0.4 - hw-int ==0.0.0.3 - hw-json ==0.6.0.0 - hw-mquery ==0.1.0.1 - hworker ==0.1.0.1 - hw-parser ==0.0.0.3 - - hw-prim ==0.5.0.0 + - hw-prim ==0.5.0.2 - hw-rankselect ==0.10.0.3 - hw-rankselect-base ==0.2.0.2 - hw-string-parse ==0.0.0.4 @@ -1050,7 +1053,7 @@ default-package-overrides: - indexed-list-literals ==0.1.0.1 - inflections ==0.4.0.1 - influxdb ==1.3.0.1 - - ini ==0.3.5 + - ini ==0.3.6 - inline-c ==0.6.0.5 - inline-c-cpp ==0.2.1.0 - inline-java ==0.8.2 @@ -1068,7 +1071,7 @@ default-package-overrides: - intervals ==0.8.1 - intro ==0.3.1.0 - invariant ==0.5 - - invertible ==0.2.0.4 + - invertible ==0.2.0.5 - io-choice ==0.0.6 - io-machine ==0.2.0.0 - io-manager ==0.1.0.2 @@ -1079,7 +1082,7 @@ default-package-overrides: - io-streams-haproxy ==1.0.0.2 - ip ==1.1.2 - ip6addr ==0.5.3 - - iproute ==1.7.3 + - iproute ==1.7.4 - IPv6Addr ==1.0.2 - IPv6DB ==0.2.6 - ipython-kernel ==0.9.0.2 @@ -1201,7 +1204,7 @@ default-package-overrides: - llvm-hs-pure ==5.1.2 - lmdb ==0.2.5 - load-env ==0.1.2 - - loch-th ==0.2.1 + - loch-th ==0.2.2 - lockfree-queue ==0.2.3.1 - log ==0.9.0.1 - log-base ==0.7.4.0 @@ -1241,8 +1244,8 @@ default-package-overrides: - markov-chain ==0.0.3.4 - markup ==4.0.4 - marvin-interpolate ==1.1.2 - - massiv ==0.1.4.0 - - massiv-io ==0.1.1.0 + - massiv ==0.1.6.1 + - massiv-io ==0.1.3.0 - mathexpr ==0.3.0.0 - math-functions ==0.2.1.0 - matplotlib ==0.6.0 @@ -1279,10 +1282,10 @@ default-package-overrides: - mighty-metropolis ==1.2.0 - milena ==0.5.2.1 - mime-mail ==0.4.14 - - mime-mail-ses ==0.4.0.0 + - mime-mail-ses ==0.4.1 - mime-types ==0.1.0.7 - minimorph ==0.1.6.1 - - miniutter ==0.4.6.0 + - miniutter ==0.4.7.0 - mintty ==0.1.1 - misfortune ==0.1.1.2 - miso ==0.14.0.0 @@ -1309,7 +1312,7 @@ default-package-overrides: - monadic-arrays ==0.2.2 - monad-journal ==0.8.1 - monadloc ==0.7.1 - - monad-logger ==0.3.28.3 + - monad-logger ==0.3.28.5 - monad-logger-json ==0.1.0.0 - monad-logger-prefix ==0.1.9 - monad-logger-syslog ==0.1.4.0 @@ -1335,7 +1338,7 @@ default-package-overrides: - monad-unlift-ref ==0.2.1 - mongoDB ==2.3.0.5 - monoidal-containers ==0.3.1.0 - - monoid-extras ==0.4.3 + - monoid-extras ==0.4.4 - monoid-subclasses ==0.4.6 - monoid-transformer ==0.0.4 - mono-traversable ==1.0.8.1 @@ -1378,7 +1381,7 @@ default-package-overrides: - nettle ==0.2.0 - netwire ==5.0.3 - netwire-input ==0.0.7 - - netwire-input-glfw ==0.0.8 + - netwire-input-glfw ==0.0.10 - network ==2.6.3.5 - network-anonymous-i2p ==0.10.0 - network-anonymous-tor ==0.11.0 @@ -1433,7 +1436,7 @@ default-package-overrides: - old-time ==1.1.0.3 - once ==0.2 - one-liner ==0.9.2 - - one-liner-instances ==0.1.1.0 + - one-liner-instances ==0.1.2.1 - OneTuple ==0.2.1 - online ==0.2.1.0 - Only ==0.1 @@ -1467,7 +1470,7 @@ default-package-overrides: - pandoc ==2.1.2 - pandoc-citeproc ==0.14.3 - pandoc-types ==1.17.3.1 - - pango ==0.13.4.0 + - pango ==0.13.5.0 - papillon ==0.1.0.5 - parallel ==3.2.1.1 - parallel-io ==0.3.3 @@ -1505,7 +1508,7 @@ default-package-overrides: - perfect-hash-generator ==0.2.0.6 - persistable-record ==0.6.0.3 - persistable-types-HDBC-pg ==0.0.1.5 - - persistent ==2.8.1 + - persistent ==2.8.2 - persistent-mongoDB ==2.8.0 - persistent-mysql ==2.8.1 - persistent-mysql-haskell ==0.4.0 @@ -1530,7 +1533,7 @@ default-package-overrides: - pipes-category ==0.3.0.0 - pipes-concurrency ==2.0.10 - pipes-csv ==1.4.3 - - pipes-extras ==1.0.13 + - pipes-extras ==1.0.14 - pipes-fastx ==0.3.0.0 - pipes-fluid ==0.6.0.0 - pipes-group ==1.0.9 @@ -1554,7 +1557,7 @@ default-package-overrides: - poly-arity ==0.1.0 - polynomials-bernstein ==1.1.2 - polyparse ==1.12 - - pomaps ==0.0.0.3 + - pomaps ==0.0.0.4 - pooled-io ==0.0.2.1 - PortMidi ==0.1.6.1 - posix-paths ==0.2.1.5 @@ -1595,7 +1598,7 @@ default-package-overrides: - prim-uniq ==0.1.0.1 - probability ==0.2.5.1 - process-extras ==0.7.4 - - product-isomorphic ==0.0.3.1 + - product-isomorphic ==0.0.3.2 - product-profunctors ==0.9.0.0 - profiterole ==0.1 - profunctors ==5.2.2 @@ -1649,7 +1652,7 @@ default-package-overrides: - raaz ==0.2.0 - rainbow ==0.28.0.4 - rainbox ==0.18.0.10 - - rakuten ==0.1.1.0 + - rakuten ==0.1.1.1 - ramus ==0.1.2 - random ==1.1 - random-fu ==0.2.7.0 @@ -1715,7 +1718,7 @@ default-package-overrides: - req-url-extra ==0.1.0.0 - reroute ==0.4.1.0 - resource-pool ==0.2.3.2 - - resourcet ==1.2.0 + - resourcet ==1.2.1 - rest-core ==0.39 - rest-snap ==0.3.0.0 - rest-stringmap ==0.2.0.7 @@ -1745,10 +1748,10 @@ default-package-overrides: - SafeSemaphore ==0.10.1 - sample-frame ==0.0.3 - sample-frame-np ==0.0.4.1 - - sampling ==0.3.2 + - sampling ==0.3.3 - sandman ==0.2.0.1 - say ==0.1.0.0 - - sbp ==2.3.13 + - sbp ==2.3.16 - sbv ==7.5 - SCalendar ==1.1.0 - scalendar ==1.2.0 @@ -1776,16 +1779,16 @@ default-package-overrides: - semiring-simple ==1.0.0.1 - semver ==0.3.3.1 - sendfile ==0.7.9 - - sensu-run ==0.4.0.4 + - sensu-run ==0.4.0.5 - seqalign ==0.2.0.4 - seqloc ==0.6.1.1 - sequence ==0.9.8 - serf ==0.1.1.0 - - servant ==0.13 + - servant ==0.13.0.1 - servant-blaze ==0.8 - servant-cassava ==0.10 - - servant-client ==0.13 - - servant-client-core ==0.13 + - servant-client ==0.13.0.1 + - servant-client-core ==0.13.0.1 - servant-docs ==0.11.2 - servant-elm ==0.4.0.1 - servant-exceptions ==0.1.1 @@ -1800,7 +1803,7 @@ default-package-overrides: - servant-pandoc ==0.5.0.0 - servant-purescript ==0.9.0.2 - servant-ruby ==0.7.0.0 - - servant-server ==0.13 + - servant-server ==0.13.0.1 - servant-static-th ==0.2.0.1 - servant-subscriber ==0.6.0.1 - servant-swagger ==1.1.5 @@ -1886,7 +1889,7 @@ default-package-overrides: - Spock-worker ==0.3.1.0 - spreadsheet ==0.1.3.7 - sqlite-simple ==0.4.15.0 - - sql-words ==0.1.5.1 + - sql-words ==0.1.6.0 - squeal-postgresql ==0.1.1.4 - srcloc ==0.5.1.2 - stache ==1.2.1 @@ -1895,7 +1898,7 @@ default-package-overrides: - state-codes ==0.1.3 - stateref ==0.3 - statestack ==0.2.0.5 - - StateVar ==1.1.0.4 + - StateVar ==1.1.1.0 - stateWriter ==0.2.10 - static-text ==0.2.0.1 - statistics ==0.14.0.2 @@ -2017,7 +2020,7 @@ default-package-overrides: - text-generic-pretty ==1.2.1 - text-icu ==0.7.0.1 - text-latin1 ==0.3.1 - - text-ldap ==0.1.1.11 + - text-ldap ==0.1.1.12 - textlocal ==0.1.0.5 - text-manipulate ==0.2.0.1 - text-metrics ==0.3.0 @@ -2031,7 +2034,7 @@ default-package-overrides: - tfp ==1.0.0.2 - tf-random ==0.5 - th-abstraction ==0.2.6.0 - - th-data-compat ==0.0.2.5 + - th-data-compat ==0.0.2.6 - th-desugar ==1.7 - these ==0.7.4 - th-expand-syns ==0.4.4.0 @@ -2046,7 +2049,7 @@ default-package-overrides: - threepenny-editors ==0.5.6 - threepenny-gui ==0.8.2.3 - threepenny-gui-flexbox ==0.4.2 - - th-reify-compat ==0.0.1.3 + - th-reify-compat ==0.0.1.4 - th-reify-many ==0.1.8 - throttle-io-stream ==0.2.0.1 - through-text ==0.1.0.0 @@ -2055,8 +2058,7 @@ default-package-overrides: - th-to-exp ==0.0.1.1 - th-utilities ==0.2.0.1 - tibetan-utils ==0.1.1.5 - - tidal ==0.9.6 - - tidal-midi ==0.9.5.2 + - tidal ==0.9.9 - tile ==0.3.0.0 - time-compat ==0.1.0.3 - timeit ==2.0 @@ -2102,7 +2104,7 @@ default-package-overrides: - tuple ==0.3.0.2 - tuples-homogenous-h98 ==0.1.1.0 - tuple-th ==0.2.5 - - turtle ==1.5.7 + - turtle ==1.5.8 - turtle-options ==0.1.0.4 - type-assertions ==0.1.0.0 - type-combinators ==0.2.4.3 @@ -2138,8 +2140,8 @@ default-package-overrides: - union-find ==0.2 - uniplate ==1.6.12 - uniq-deep ==1.1.0.0 - - unique ==0 - Unique ==0.4.7.2 + - unique ==0 - unit-constraint ==0.0.0 - units-parser ==0.1.1.2 - universe ==1.0 @@ -2148,7 +2150,7 @@ default-package-overrides: - universe-instances-extended ==1.0.0.1 - universe-instances-trans ==1.0.0.1 - universe-reverse-instances ==1.0 - - universum ==1.1.0 + - universum ==1.1.1 - unix-bytestring ==0.3.7.3 - unix-compat ==0.5.0.1 - unix-time ==0.3.8 @@ -2239,8 +2241,8 @@ default-package-overrides: - wai-slack-middleware ==0.2.0 - wai-transformers ==0.0.7 - wai-websockets ==3.0.1.2 - - warp ==3.2.18.2 - - warp-tls ==3.2.4.2 + - warp ==3.2.19 + - warp-tls ==3.2.4.3 - wave ==0.1.5 - wavefront ==0.7.1.2 - webdriver ==0.8.5 @@ -2261,8 +2263,8 @@ default-package-overrides: - weigh ==0.0.7 - wide-word ==0.1.0.6 - wikicfp-scraper ==0.1.0.9 - - wild-bind ==0.1.1.1 - - wild-bind-x11 ==0.2.0.1 + - wild-bind ==0.1.2.0 + - wild-bind-x11 ==0.2.0.2 - Win32 ==2.5.4.1 - Win32-notify ==0.3.0.3 - wire-streams ==0.1.1.0 @@ -2271,7 +2273,7 @@ default-package-overrides: - with-location ==0.1.0 - witness ==0.4 - wizards ==1.0.2 - - wl-pprint ==1.2 + - wl-pprint ==1.2.1 - wl-pprint-annotated ==0.1.0.0 - wl-pprint-console ==0.1.0.1 - wl-pprint-extras ==3.5.0.5 @@ -2325,7 +2327,7 @@ default-package-overrides: - xml-types ==0.3.6 - xmonad ==0.13 - xmonad-contrib ==0.13 - - xmonad-extras ==0.13.2 + - xmonad-extras ==0.13.3 - xss-sanitize ==0.3.5.7 - xturtle ==0.2.0.0 - xxhash ==0.0.2 @@ -2336,11 +2338,11 @@ default-package-overrides: - yeshql ==3.0.1.3 - yesod ==1.6.0 - yesod-alerts ==0.1.2.0 - - yesod-auth ==1.6.2 + - yesod-auth ==1.6.3 - yesod-auth-fb ==1.9.0 - yesod-auth-hashdb ==1.7 - yesod-bin ==1.6.0 - - yesod-core ==1.6.2 + - yesod-core ==1.6.3 - yesod-csp ==0.2.4.0 - yesod-eventsource ==1.6.0 - yesod-fb ==0.5.0 @@ -2385,7 +2387,7 @@ default-package-overrides: - zlib-lens ==0.1.2.1 - zot ==0.0.3 - zstd ==0.1.0.0 - - ztail ==1.2.0.1 + - ztail ==1.2.0.2 extra-packages: - aeson < 0.8 # newer versions don't work with GHC 7.6.x or earlier @@ -2699,6 +2701,7 @@ dont-distribute-packages: AERN-RnToRm: [ i686-linux, x86_64-linux, x86_64-darwin ] aeson-applicative: [ i686-linux, x86_64-linux, x86_64-darwin ] aeson-bson: [ i686-linux, x86_64-linux, x86_64-darwin ] + aeson-diff-generic: [ i686-linux, x86_64-linux, x86_64-darwin ] aeson-diff: [ i686-linux, x86_64-linux, x86_64-darwin ] aeson-extra: [ i686-linux, x86_64-linux, x86_64-darwin ] aeson-flowtyped: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -2739,6 +2742,7 @@ dont-distribute-packages: algebraic-prelude: [ i686-linux, x86_64-linux, x86_64-darwin ] algebraic: [ i686-linux, x86_64-linux, x86_64-darwin ] algo-s: [ i686-linux, x86_64-linux, x86_64-darwin ] + AlgoRhythm: [ i686-linux, x86_64-linux, x86_64-darwin ] AlgorithmW: [ i686-linux, x86_64-linux, x86_64-darwin ] align-text: [ i686-linux, x86_64-linux, x86_64-darwin ] AlignmentAlgorithms: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -2754,6 +2758,7 @@ dont-distribute-packages: alternative-extra: [ i686-linux, x86_64-linux, x86_64-darwin ] alternative-io: [ i686-linux, x86_64-linux, x86_64-darwin ] altfloat: [ i686-linux, x86_64-linux, x86_64-darwin ] + alto: [ i686-linux, x86_64-linux, x86_64-darwin ] alure: [ i686-linux, x86_64-linux, x86_64-darwin ] amazon-emailer-client-snap: [ i686-linux, x86_64-linux, x86_64-darwin ] amazon-emailer: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3080,6 +3085,7 @@ dont-distribute-packages: barrie: [ i686-linux, x86_64-linux, x86_64-darwin ] barrier-monad: [ i686-linux, x86_64-linux, x86_64-darwin ] barrier: [ i686-linux, x86_64-linux, x86_64-darwin ] + base-compat-batteries: [ i686-linux, x86_64-linux, x86_64-darwin ] base-generics: [ i686-linux, x86_64-linux, x86_64-darwin ] base-io-access: [ i686-linux, x86_64-linux, x86_64-darwin ] base-noprelude: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3098,6 +3104,7 @@ dont-distribute-packages: bdcs: [ i686-linux, x86_64-linux, x86_64-darwin ] beam-core: [ i686-linux, x86_64-linux, x86_64-darwin ] beam-migrate: [ i686-linux, x86_64-linux, x86_64-darwin ] + beam-postgres: [ i686-linux, x86_64-linux, x86_64-darwin ] beam-sqlite: [ i686-linux, x86_64-linux, x86_64-darwin ] beam-th: [ i686-linux, x86_64-linux, x86_64-darwin ] beam: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3265,6 +3272,7 @@ dont-distribute-packages: bowntz: [ i686-linux, x86_64-linux, x86_64-darwin ] braid: [ i686-linux, x86_64-linux, x86_64-darwin ] brain-bleep: [ i686-linux, x86_64-linux, x86_64-darwin ] + brainheck: [ i686-linux, x86_64-linux, x86_64-darwin ] Bravo: [ i686-linux, x86_64-linux, x86_64-darwin ] breakout: [ i686-linux, x86_64-linux, x86_64-darwin ] breve: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3277,6 +3285,7 @@ dont-distribute-packages: brillig: [ i686-linux, x86_64-linux, x86_64-darwin ] broccoli: [ i686-linux, x86_64-linux, x86_64-darwin ] broker-haskell: [ i686-linux, x86_64-linux, x86_64-darwin ] + bronyradiogermany-streaming: [ i686-linux, x86_64-linux, x86_64-darwin ] browscap: [ i686-linux, x86_64-linux, x86_64-darwin ] bson-generic: [ i686-linux, x86_64-linux, x86_64-darwin ] bson-generics: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3594,6 +3603,7 @@ dont-distribute-packages: coltrane: [ i686-linux, x86_64-linux, x86_64-darwin ] columbia: [ i686-linux, x86_64-linux, x86_64-darwin ] com: [ i686-linux, x86_64-linux, x86_64-darwin ] + combinat-compat: [ i686-linux, x86_64-linux, x86_64-darwin ] combinat-diagrams: [ i686-linux, x86_64-linux, x86_64-darwin ] combinator-interactive: [ i686-linux, x86_64-linux, x86_64-darwin ] combinatorial-problems: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3709,6 +3719,7 @@ dont-distribute-packages: convert: [ i686-linux, x86_64-linux, x86_64-darwin ] convertible-ascii: [ i686-linux, x86_64-linux, x86_64-darwin ] convertible-text: [ i686-linux, x86_64-linux, x86_64-darwin ] + coordinate: [ i686-linux, x86_64-linux, x86_64-darwin ] copilot-cbmc: [ i686-linux, x86_64-linux, x86_64-darwin ] copilot-language: [ i686-linux, x86_64-linux, x86_64-darwin ] copilot-libraries: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3742,6 +3753,7 @@ dont-distribute-packages: cplusplus-th: [ i686-linux, x86_64-linux, x86_64-darwin ] cprng-aes-effect: [ i686-linux, x86_64-linux, x86_64-darwin ] cpuperf: [ i686-linux, x86_64-linux, x86_64-darwin ] + cpython: [ i686-linux, x86_64-linux, x86_64-darwin ] cqrs-core: [ i686-linux, x86_64-linux, x86_64-darwin ] cqrs-example: [ i686-linux, x86_64-linux, x86_64-darwin ] cqrs-memory: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -4236,6 +4248,7 @@ dont-distribute-packages: eros-client: [ i686-linux, x86_64-linux, x86_64-darwin ] eros-http: [ i686-linux, x86_64-linux, x86_64-darwin ] eros: [ i686-linux, x86_64-linux, x86_64-darwin ] + error-context: [ i686-linux, x86_64-linux, x86_64-darwin ] error-continuations: [ i686-linux, x86_64-linux, x86_64-darwin ] error-list: [ i686-linux, x86_64-linux, x86_64-darwin ] error-loc: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -4332,6 +4345,7 @@ dont-distribute-packages: fallingblocks: [ i686-linux, x86_64-linux, x86_64-darwin ] family-tree: [ i686-linux, x86_64-linux, x86_64-darwin ] fast-arithmetic: [ i686-linux, x86_64-linux, x86_64-darwin ] + fast-builder: [ i686-linux, x86_64-linux, x86_64-darwin ] fast-combinatorics: [ i686-linux, x86_64-linux, x86_64-darwin ] fast-nats: [ i686-linux, x86_64-linux, x86_64-darwin ] fasta: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -4661,6 +4675,7 @@ dont-distribute-packages: gf: [ i686-linux, x86_64-linux, x86_64-darwin ] GGg: [ i686-linux, x86_64-linux, x86_64-darwin ] ggtsTC: [ i686-linux, x86_64-linux, x86_64-darwin ] + ghc-core-smallstep: [ i686-linux, x86_64-linux, x86_64-darwin ] ghc-datasize: [ i686-linux, x86_64-linux, x86_64-darwin ] ghc-dump-core: [ i686-linux, x86_64-linux, x86_64-darwin ] ghc-dump-tree: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -5019,6 +5034,7 @@ dont-distribute-packages: gtfs: [ i686-linux, x86_64-linux, x86_64-darwin ] gtk-mac-integration: [ i686-linux, x86_64-linux, x86_64-darwin ] gtk-serialized-event: [ i686-linux, x86_64-linux, x86_64-darwin ] + gtk-strut: [ i686-linux, x86_64-linux, x86_64-darwin ] gtk-toy: [ i686-linux, x86_64-linux, x86_64-darwin ] gtk2hs-cast-glade: [ i686-linux, x86_64-linux, x86_64-darwin ] gtk2hs-cast-gnomevfs: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -5575,6 +5591,7 @@ dont-distribute-packages: HLearn-datastructures: [ i686-linux, x86_64-linux, x86_64-darwin ] HLearn-distributions: [ i686-linux, x86_64-linux, x86_64-darwin ] hledger-chart: [ i686-linux, x86_64-linux, x86_64-darwin ] + hledger-irr: [ i686-linux, x86_64-linux, x86_64-darwin ] hledger-vty: [ i686-linux, x86_64-linux, x86_64-darwin ] hlibBladeRF: [ i686-linux, x86_64-linux, x86_64-darwin ] hlibev: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -5688,6 +5705,8 @@ dont-distribute-packages: hpasteit: [ i686-linux, x86_64-linux, x86_64-darwin ] HPath: [ i686-linux, x86_64-linux, x86_64-darwin ] hpc-tracer: [ i686-linux, x86_64-linux, x86_64-darwin ] + hPDB-examples: [ i686-linux, x86_64-linux, x86_64-darwin ] + hPDB: [ i686-linux, x86_64-linux, x86_64-darwin ] hpdft: [ i686-linux, x86_64-linux, x86_64-darwin ] HPhone: [ i686-linux, x86_64-linux, x86_64-darwin ] HPi: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -5749,6 +5768,7 @@ dont-distribute-packages: hs2bf: [ i686-linux, x86_64-linux, x86_64-darwin ] hs2dot: [ i686-linux, x86_64-linux, x86_64-darwin ] Hs2lib: [ i686-linux, x86_64-linux, x86_64-darwin ] + hsaml2: [ i686-linux, x86_64-linux, x86_64-darwin ] hsass: [ i686-linux, x86_64-linux, x86_64-darwin ] hsay: [ i686-linux, x86_64-linux, x86_64-darwin ] hsbackup: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -5936,6 +5956,7 @@ dont-distribute-packages: hw-json-lens: [ i686-linux, x86_64-linux, x86_64-darwin ] hw-json: [ i686-linux, x86_64-linux, x86_64-darwin ] hw-kafka-avro: [ i686-linux, x86_64-linux, x86_64-darwin ] + hw-prim-bits: [ i686-linux, x86_64-linux, x86_64-darwin ] hw-xml: [ i686-linux, x86_64-linux, x86_64-darwin ] hwall-auth-iitk: [ i686-linux, x86_64-linux, x86_64-darwin ] hweblib: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -5943,6 +5964,9 @@ dont-distribute-packages: hworker-ses: [ i686-linux, x86_64-linux, x86_64-darwin ] hworker: [ i686-linux, x86_64-linux, x86_64-darwin ] hws: [ i686-linux, x86_64-linux, x86_64-darwin ] + hwsl2-bytevector: [ i686-linux, x86_64-linux, x86_64-darwin ] + hwsl2-reducers: [ i686-linux, x86_64-linux, x86_64-darwin ] + hwsl2: [ i686-linux, x86_64-linux, x86_64-darwin ] HXMPP: [ i686-linux, x86_64-linux, x86_64-darwin ] hxmppc: [ i686-linux, x86_64-linux, x86_64-darwin ] hxournal: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -6347,9 +6371,10 @@ dont-distribute-packages: language-lua-qq: [ i686-linux, x86_64-linux, x86_64-darwin ] language-mixal: [ i686-linux, x86_64-linux, x86_64-darwin ] language-ninja: [ i686-linux, x86_64-linux, x86_64-darwin ] + language-oberon: [ i686-linux, x86_64-linux, x86_64-darwin ] language-objc: [ i686-linux, x86_64-linux, x86_64-darwin ] language-pig: [ i686-linux, x86_64-linux, x86_64-darwin ] - language-puppet: [ i686-linux, x86_64-linux, x86_64-darwin ] + language-puppet: [ i686-linux, x86_64-darwin ] language-python-colour: [ i686-linux, x86_64-linux, x86_64-darwin ] language-python-test: [ i686-linux, x86_64-linux, x86_64-darwin ] language-python: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -6371,9 +6396,11 @@ dont-distribute-packages: latex-formulae-pandoc: [ i686-linux, x86_64-linux, x86_64-darwin ] LATS: [ i686-linux, x86_64-linux, x86_64-darwin ] launchpad-control: [ i686-linux, x86_64-linux, x86_64-darwin ] + layered-state: [ i686-linux, x86_64-linux, x86_64-darwin ] layers-game: [ i686-linux, x86_64-linux, x86_64-darwin ] layers: [ i686-linux, x86_64-linux, x86_64-darwin ] layout-bootstrap: [ i686-linux, x86_64-linux, x86_64-darwin ] + layouting: [ i686-linux, x86_64-linux, x86_64-darwin ] lazy-hash-cache: [ i686-linux, x86_64-linux, x86_64-darwin ] lazy-hash: [ i686-linux, x86_64-linux, x86_64-darwin ] lazy-io-streams: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -6439,6 +6466,7 @@ dont-distribute-packages: libstackexchange: [ i686-linux, x86_64-linux, x86_64-darwin ] libsystemd-daemon: [ i686-linux, x86_64-linux, x86_64-darwin ] libtagc: [ i686-linux, x86_64-linux, x86_64-darwin ] + libvirt-hs: [ i686-linux, x86_64-linux, x86_64-darwin ] libxls: [ i686-linux, x86_64-linux, x86_64-darwin ] libxml-enumerator: [ i686-linux, x86_64-linux, x86_64-darwin ] libxslt: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -6619,6 +6647,7 @@ dont-distribute-packages: mailchimp: [ i686-linux, x86_64-linux, x86_64-darwin ] MailchimpSimple: [ i686-linux, x86_64-linux, x86_64-darwin ] mailgun: [ i686-linux, x86_64-linux, x86_64-darwin ] + main-tester: [ i686-linux, x86_64-linux, x86_64-darwin ] majordomo: [ i686-linux, x86_64-linux, x86_64-darwin ] majority: [ i686-linux, x86_64-linux, x86_64-darwin ] make-hard-links: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -6786,12 +6815,14 @@ dont-distribute-packages: MoeDict: [ i686-linux, x86_64-linux, x86_64-darwin ] mohws: [ i686-linux, x86_64-linux, x86_64-darwin ] mollie-api-haskell: [ i686-linux, x86_64-linux, x86_64-darwin ] + monad-abort-fd: [ i686-linux, x86_64-linux, x86_64-darwin ] monad-atom-simple: [ i686-linux, x86_64-linux, x86_64-darwin ] monad-atom: [ i686-linux, x86_64-linux, x86_64-darwin ] monad-classes-logging: [ i686-linux, x86_64-linux, x86_64-darwin ] monad-classes: [ i686-linux, x86_64-linux, x86_64-darwin ] monad-dijkstra: [ i686-linux, x86_64-linux, x86_64-darwin ] monad-exception: [ i686-linux, x86_64-linux, x86_64-darwin ] + monad-finally: [ i686-linux, x86_64-linux, x86_64-darwin ] monad-fork: [ i686-linux, x86_64-linux, x86_64-darwin ] monad-http: [ i686-linux, x86_64-linux, x86_64-darwin ] monad-interleave: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -7099,6 +7130,7 @@ dont-distribute-packages: numeric-ranges: [ i686-linux, x86_64-linux, x86_64-darwin ] numhask-array: [ i686-linux, x86_64-linux, x86_64-darwin ] numhask-histogram: [ i686-linux, x86_64-linux, x86_64-darwin ] + numhask-prelude: [ i686-linux, x86_64-linux, x86_64-darwin ] numhask-range: [ i686-linux, x86_64-linux, x86_64-darwin ] numhask: [ i686-linux, x86_64-linux, x86_64-darwin ] Nussinov78: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -7231,6 +7263,7 @@ dont-distribute-packages: pagarme: [ i686-linux, x86_64-linux, x86_64-darwin ] PageIO: [ i686-linux, x86_64-linux, x86_64-darwin ] Paillier: [ i686-linux, x86_64-linux, x86_64-darwin ] + pam: [ i686-linux, x86_64-linux, x86_64-darwin ] panda: [ i686-linux, x86_64-linux, x86_64-darwin ] pandoc-crossref: [ i686-linux, x86_64-linux, x86_64-darwin ] pandoc-csv2table: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -7375,6 +7408,7 @@ dont-distribute-packages: picosat: [ i686-linux, x86_64-linux, x86_64-darwin ] pictikz: [ i686-linux, x86_64-linux, x86_64-darwin ] piet: [ i686-linux, x86_64-linux, x86_64-darwin ] + pig: [ i686-linux, x86_64-linux, x86_64-darwin ] pinchot: [ i686-linux, x86_64-linux, x86_64-darwin ] pinpon: [ i686-linux, x86_64-linux, x86_64-darwin ] Pipe: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -7428,6 +7462,7 @@ dont-distribute-packages: plat: [ i686-linux, x86_64-linux, x86_64-darwin ] platinum-parsing: [ i686-linux, x86_64-linux, x86_64-darwin ] PlayingCards: [ i686-linux, x86_64-linux, x86_64-darwin ] + plex: [ i686-linux, x86_64-linux, x86_64-darwin ] plist-buddy: [ i686-linux, x86_64-linux, x86_64-darwin ] plivo: [ i686-linux, x86_64-linux, x86_64-darwin ] plocketed: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8129,6 +8164,7 @@ dont-distribute-packages: servant-auth-token-leveldb: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-auth-token-persistent: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-auth-token-rocksdb: [ i686-linux, x86_64-linux, x86_64-darwin ] + servant-cassava: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-client-core: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-csharp: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-db-postgresql: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8512,6 +8548,7 @@ dont-distribute-packages: stats: [ i686-linux, x86_64-linux, x86_64-darwin ] statsd-client: [ i686-linux, x86_64-linux, x86_64-darwin ] statsd: [ i686-linux, x86_64-linux, x86_64-darwin ] + status-notifier-item: [ i686-linux, x86_64-linux, x86_64-darwin ] stb-truetype: [ i686-linux, x86_64-linux, x86_64-darwin ] stdata: [ i686-linux, x86_64-linux, x86_64-darwin ] stdf: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8739,6 +8776,7 @@ dont-distribute-packages: tensorflow: [ i686-linux, x86_64-linux, x86_64-darwin ] term-rewriting: [ i686-linux, x86_64-linux, x86_64-darwin ] termbox-bindings: [ i686-linux, x86_64-linux, x86_64-darwin ] + terminal-text: [ i686-linux, x86_64-linux, x86_64-darwin ] termination-combinators: [ i686-linux, x86_64-linux, x86_64-darwin ] termplot: [ i686-linux, x86_64-linux, x86_64-darwin ] terntup: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8913,6 +8951,8 @@ dont-distribute-packages: travis: [ i686-linux, x86_64-linux, x86_64-darwin ] trawl: [ i686-linux, x86_64-linux, x86_64-darwin ] traypoweroff: [ i686-linux, x86_64-linux, x86_64-darwin ] + tree-diff: [ i686-linux, x86_64-linux, x86_64-darwin ] + tree-traversals: [ i686-linux, x86_64-linux, x86_64-darwin ] TreeCounter: [ i686-linux, x86_64-linux, x86_64-darwin ] treemap-html-tools: [ i686-linux, x86_64-linux, x86_64-darwin ] treemap-html: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8995,6 +9035,7 @@ dont-distribute-packages: type-spine: [ i686-linux, x86_64-linux, x86_64-darwin ] type-structure: [ i686-linux, x86_64-linux, x86_64-darwin ] type-sub-th: [ i686-linux, x86_64-linux, x86_64-darwin ] + type-tree: [ i686-linux, x86_64-linux, x86_64-darwin ] typeable-th: [ i686-linux, x86_64-linux, x86_64-darwin ] TypeClass: [ i686-linux, x86_64-linux, x86_64-darwin ] typed-spreadsheet: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -9135,6 +9176,7 @@ dont-distribute-packages: vector-space-map: [ i686-linux, x86_64-linux, x86_64-darwin ] vector-space-opengl: [ i686-linux, x86_64-linux, x86_64-darwin ] vector-static: [ i686-linux, x86_64-linux, x86_64-darwin ] + vector-text: [ i686-linux, x86_64-linux, x86_64-darwin ] Verba: [ i686-linux, x86_64-linux, x86_64-darwin ] verbalexpressions: [ i686-linux, x86_64-linux, x86_64-darwin ] verdict-json: [ i686-linux, x86_64-linux, x86_64-darwin ] diff --git a/pkgs/development/haskell-modules/generic-builder.nix b/pkgs/development/haskell-modules/generic-builder.nix index 52d596da701a..3ab77c42cbba 100644 --- a/pkgs/development/haskell-modules/generic-builder.nix +++ b/pkgs/development/haskell-modules/generic-builder.nix @@ -136,7 +136,7 @@ let (optionalString (enableSharedExecutables && stdenv.isDarwin) "--ghc-option=-optl=-Wl,-headerpad_max_install_names") (optionalString enableParallelBuilding "--ghc-option=-j$NIX_BUILD_CORES") (optionalString useCpphs "--with-cpphs=${cpphs}/bin/cpphs --ghc-options=-cpp --ghc-options=-pgmP${cpphs}/bin/cpphs --ghc-options=-optP--cpp") - (enableFeature (enableDeadCodeElimination && !hostPlatform.isArm && !hostPlatform.isAarch64 && (versionAtLeast "8.0.1" ghc.version)) "split-objs") + (enableFeature (enableDeadCodeElimination && !hostPlatform.isAarch32 && !hostPlatform.isAarch64 && (versionAtLeast "8.0.1" ghc.version)) "split-objs") (enableFeature enableLibraryProfiling "library-profiling") (optionalString ((enableExecutableProfiling || enableLibraryProfiling) && versionOlder "8" ghc.version) "--profiling-detail=${profilingDetail}") (enableFeature enableExecutableProfiling (if versionOlder ghc.version "8" then "executable-profiling" else "profiling")) diff --git a/pkgs/development/haskell-modules/hackage-packages.nix b/pkgs/development/haskell-modules/hackage-packages.nix index a28a0b7674aa..8d25c173d75a 100644 --- a/pkgs/development/haskell-modules/hackage-packages.nix +++ b/pkgs/development/haskell-modules/hackage-packages.nix @@ -866,6 +866,7 @@ self: { homepage = "http://github.com/omelkonian/AlgoRhythm/"; description = "Algorithmic music composition"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "AlgorithmW" = callPackage @@ -6093,16 +6094,17 @@ self: { }) {inherit (pkgs.xorg) libX11; inherit (pkgs.xorg) libXrandr;}; "GLFW-b" = callPackage - ({ mkDerivation, base, bindings-GLFW, HUnit, test-framework - , test-framework-hunit + ({ mkDerivation, base, bindings-GLFW, deepseq, HUnit + , test-framework, test-framework-hunit }: mkDerivation { pname = "GLFW-b"; - version = "1.4.8.1"; - sha256 = "1sca2wzkqw77jdj9mxnswx7zaicj1dsl5k3gjsaxmjznbkn4k2j3"; - libraryHaskellDepends = [ base bindings-GLFW ]; + version = "1.4.8.3"; + sha256 = "01dp6akv70wq9c5qib5f8cmrva9xmqrmdcf30k9y4kklrvbk599z"; + libraryHaskellDepends = [ base bindings-GLFW deepseq ]; testHaskellDepends = [ - base bindings-GLFW HUnit test-framework test-framework-hunit + base bindings-GLFW deepseq HUnit test-framework + test-framework-hunit ]; description = "Bindings to GLFW OpenGL library"; license = stdenv.lib.licenses.bsd3; @@ -8192,14 +8194,14 @@ self: { }: mkDerivation { pname = "HMap"; - version = "1.2.7"; - sha256 = "0xq5qr1v74z9bppcgl4g06cpnmyrqmc41kvcyx58272pw70vlv40"; + version = "1.3.0"; + sha256 = "01y8mspmf7k0mxafyanfirbjp46x54wnm4n6lwc2jczw5bb48yx7"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base data-default hashable mtl unordered-containers ]; homepage = "https://github.com/atzeus/HMap"; - description = "Fast heterogeneous maps and unconstrained typeable like functionality"; + description = "Fast heterogeneous maps and unconstrained typeable-like functionality"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; }) {}; @@ -9537,8 +9539,8 @@ self: { }: mkDerivation { pname = "Hastodon"; - version = "0.3.1"; - sha256 = "0z8ph9frrad5nn23hi3qr2gj7lh7p2qpcmx4rdyv8vlqal38zdv1"; + version = "0.3.2"; + sha256 = "0qdq23mg1nszsf3ldbdawdkcmbv18cmny6529k9kwlfq9fhdm83x"; libraryHaskellDepends = [ aeson base bytestring http-client http-conduit http-types mime-types MissingH text @@ -13800,13 +13802,13 @@ self: { }) {}; "OddWord" = callPackage - ({ mkDerivation, base, criterion, QuickCheck }: + ({ mkDerivation, base, criterion, hspec, QuickCheck }: mkDerivation { pname = "OddWord"; - version = "1.0.1.1"; - sha256 = "0sb0hmvvp6cdxf8siqfp7wvcxq8rbiz7h9mxmbkcksscjp8m02mm"; + version = "1.0.2.0"; + sha256 = "14hd7dd3dyfd9cs9kgxjippi2awpambn2ia7s3kxcvinnfbigj3r"; libraryHaskellDepends = [ base ]; - testHaskellDepends = [ base QuickCheck ]; + testHaskellDepends = [ base hspec QuickCheck ]; benchmarkHaskellDepends = [ base criterion ]; homepage = "http://www.gekkou.co.uk/"; description = "Provides a wrapper for deriving word types with fewer bits"; @@ -15141,6 +15143,25 @@ self: { license = stdenv.lib.licenses.gpl3; }) {}; + "PyF" = callPackage + ({ mkDerivation, base, containers, formatting, haskell-src-meta + , hspec, megaparsec, process, template-haskell, text + }: + mkDerivation { + pname = "PyF"; + version = "0.5.0.0"; + sha256 = "0i0ir7i17r7lzk6c58yybsvz4s9131d1xc3jz3m3lhl3hsvyrgz5"; + libraryHaskellDepends = [ + base containers formatting haskell-src-meta megaparsec + template-haskell text + ]; + testHaskellDepends = [ + base formatting hspec process template-haskell text + ]; + description = "Quasiquotations for a python like interpolated string formater"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "QIO" = callPackage ({ mkDerivation, base, containers, mtl, old-time, random }: mkDerivation { @@ -17529,8 +17550,8 @@ self: { ({ mkDerivation, base, stm, transformers }: mkDerivation { pname = "StateVar"; - version = "1.1.0.4"; - sha256 = "1dzz9l0haswgag9x56q7n57kw18v7nhmzkjyr61nz9y9npn8vmks"; + version = "1.1.1.0"; + sha256 = "102f4x240zj3jwa7gx6vp813j76cjhlc3zbi9i5kiz6268kcv28s"; libraryHaskellDepends = [ base stm transformers ]; homepage = "https://github.com/haskell-opengl/StateVar"; description = "State variables"; @@ -19592,6 +19613,26 @@ self: { inherit (pkgs.xorg) libXext; inherit (pkgs.xorg) libXinerama; inherit (pkgs.xorg) libXrandr; inherit (pkgs.xorg) libXrender;}; + "X11_1_9" = callPackage + ({ mkDerivation, base, data-default, libX11, libXext, libXinerama + , libXrandr, libXrender, libXScrnSaver + }: + mkDerivation { + pname = "X11"; + version = "1.9"; + sha256 = "1f8dy6ckkyvpcv7zlniyv01cqjb9lgqscm8pml58cvwc7n38w4qh"; + libraryHaskellDepends = [ base data-default ]; + librarySystemDepends = [ + libX11 libXext libXinerama libXrandr libXrender libXScrnSaver + ]; + homepage = "https://github.com/xmonad/X11"; + description = "A binding to the X11 graphics library"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {inherit (pkgs.xorg) libX11; inherit (pkgs.xorg) libXScrnSaver; + inherit (pkgs.xorg) libXext; inherit (pkgs.xorg) libXinerama; + inherit (pkgs.xorg) libXrandr; inherit (pkgs.xorg) libXrender;}; + "X11-extras" = callPackage ({ mkDerivation, base, libX11, X11 }: mkDerivation { @@ -21715,8 +21756,8 @@ self: { pname = "active"; version = "0.2.0.13"; sha256 = "1yw029rh0gb63bhwwjynbv173mny14is4cyjkrlvzvxwb0fi96jx"; - revision = "3"; - editedCabalFile = "0jm8kkqa5k9nppis3jdx11nmds6w0x62rmnv5bn5q3b75llhnlc1"; + revision = "4"; + editedCabalFile = "1p2gaazj7r98v45d57hshgv6nxam5l47dl6y9iq65z5zqylmz7q2"; libraryHaskellDepends = [ base lens linear semigroupoids semigroups vector ]; @@ -22329,21 +22370,22 @@ self: { "aeson-diff-generic" = callPackage ({ mkDerivation, aeson, aeson-diff, base, base-compat, bytestring - , containers, dlist, hashable, scientific, tagged, template-haskell - , text, th-abstraction, time, unordered-containers, uuid-types - , vector + , containers, dlist, hashable, lens, scientific, tagged + , template-haskell, text, th-abstraction, time + , unordered-containers, uuid-types, vector }: mkDerivation { pname = "aeson-diff-generic"; - version = "0.0.2"; - sha256 = "0dm2rzww9rc6l3ql42px96fpsfjvw9g0w13j0y02dq33qb0w7a1v"; + version = "0.0.3"; + sha256 = "12vilqp1v49pchfq8xk8k1f3m8kgl7s5n5m1w680cbh5flj050w2"; libraryHaskellDepends = [ aeson aeson-diff base base-compat bytestring containers dlist - hashable scientific tagged template-haskell text th-abstraction - time unordered-containers uuid-types vector + hashable lens scientific tagged template-haskell text + th-abstraction time unordered-containers uuid-types vector ]; description = "Apply a json-patch to any haskell datatype"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "aeson-extra" = callPackage @@ -22377,6 +22419,35 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "aeson-extra_0_4_1_1" = callPackage + ({ mkDerivation, aeson, aeson-compat, attoparsec + , attoparsec-iso8601, base, base-compat-batteries, bytestring + , containers, deepseq, exceptions, hashable, parsec + , quickcheck-instances, recursion-schemes, scientific, tasty + , tasty-hunit, tasty-quickcheck, template-haskell, text, these + , time, time-parsers, unordered-containers, vector + }: + mkDerivation { + pname = "aeson-extra"; + version = "0.4.1.1"; + sha256 = "1y7xss382hdxrv4jzprsm3b7ij7wiw8jgjg9wp49dx6bfvcnb2nl"; + libraryHaskellDepends = [ + aeson aeson-compat attoparsec attoparsec-iso8601 base + base-compat-batteries bytestring containers deepseq exceptions + hashable parsec recursion-schemes scientific template-haskell text + these time unordered-containers vector + ]; + testHaskellDepends = [ + base containers quickcheck-instances tasty tasty-hunit + tasty-quickcheck these time time-parsers unordered-containers + vector + ]; + homepage = "https://github.com/phadej/aeson-extra#readme"; + description = "Extra goodies for aeson"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "aeson-filthy" = callPackage ({ mkDerivation, aeson, base, bytestring, doctest, text , unordered-containers @@ -22451,8 +22522,8 @@ self: { ({ mkDerivation, aeson, base }: mkDerivation { pname = "aeson-generic-compat"; - version = "0.0.1.1"; - sha256 = "1davhg48x4k9nsizpafjlicwryi05ijfh902bn35x76pay7alims"; + version = "0.0.1.2"; + sha256 = "08h4r8ni7i9x0fqx5gizv6fpwrq84lv8m4c3w6g2hirs0iscw233"; libraryHaskellDepends = [ aeson base ]; description = "Compatible generic class names of Aeson"; license = stdenv.lib.licenses.bsd3; @@ -22634,28 +22705,6 @@ self: { }: mkDerivation { pname = "aeson-pretty"; - version = "0.8.5"; - sha256 = "1yd98972srlbkn0f2jhrb3f443j9wnq2fnw5gbxjxzmkcinfh5yx"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - aeson base base-compat bytestring scientific text - unordered-containers vector - ]; - executableHaskellDepends = [ - aeson attoparsec base bytestring cmdargs - ]; - homepage = "http://github.com/informatikr/aeson-pretty"; - description = "JSON pretty-printing library and command-line tool"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "aeson-pretty_0_8_7" = callPackage - ({ mkDerivation, aeson, attoparsec, base, base-compat, bytestring - , cmdargs, scientific, text, unordered-containers, vector - }: - mkDerivation { - pname = "aeson-pretty"; version = "0.8.7"; sha256 = "1m977gs0s9gf3lwzlbs5y7bl6ansc5pywmn2qjk09l5bwg2yrhf1"; isLibrary = true; @@ -22670,7 +22719,6 @@ self: { homepage = "http://github.com/informatikr/aeson-pretty"; description = "JSON pretty-printing library and command-line tool"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "aeson-qq" = callPackage @@ -23299,16 +23347,16 @@ self: { }) {}; "aivika" = callPackage - ({ mkDerivation, array, base, binary, containers, deepseq, mtl - , mwc-random, random, semigroups, vector + ({ mkDerivation, array, base, binary, containers, deepseq + , exceptions, mtl, mwc-random, random, semigroups, vector }: mkDerivation { pname = "aivika"; - version = "5.6"; - sha256 = "0gri5kwzw2a9fjcr7924kdaxgs9zl4j8brgknwyxrky0p93a8zry"; + version = "5.7"; + sha256 = "1zhzb9pchpj9vk0zc3wb9bpxbw7zfn63m7ng37z46lwyv5s55d5m"; libraryHaskellDepends = [ - array base binary containers deepseq mtl mwc-random random - semigroups vector + array base binary containers deepseq exceptions mtl mwc-random + random semigroups vector ]; homepage = "http://www.aivikasoft.com"; description = "A multi-method simulation library"; @@ -23338,8 +23386,8 @@ self: { }: mkDerivation { pname = "aivika-distributed"; - version = "1.2"; - sha256 = "092jril2vfi90bbi9wc2ir4gidqzq0w84mgbgz72icx63nni1ah0"; + version = "1.3"; + sha256 = "1sm56b6z8ajkap3nlcrsl592m40vgb5zmhhnc8al6arrra2j21pc"; libraryHaskellDepends = [ aivika aivika-transformers array base binary containers distributed-process exceptions mtl mwc-random random stm time @@ -23471,16 +23519,16 @@ self: { }) {}; "aivika-transformers" = callPackage - ({ mkDerivation, aivika, array, base, containers, mtl, mwc-random - , random, semigroups, vector + ({ mkDerivation, aivika, array, base, containers, exceptions, mtl + , mwc-random, random, semigroups, vector }: mkDerivation { pname = "aivika-transformers"; - version = "5.6"; - sha256 = "0vy3d4vldifiwc12j6746axhb1k3ir703wzgycvk4xn60qhjp4g9"; + version = "5.7"; + sha256 = "1nwffb0x7lzl52xqki415dgmag9dg66jv45qirdnmkjs33x0by3r"; libraryHaskellDepends = [ - aivika array base containers mtl mwc-random random semigroups - vector + aivika array base containers exceptions mtl mwc-random random + semigroups vector ]; homepage = "http://www.aivikasoft.com"; description = "Transformers for the Aivika simulation library"; @@ -23677,8 +23725,8 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "alg"; - version = "0.2.0.0"; - sha256 = "1lh5pz3zmzyq9dkgzabgi8xhlssxccxw24ng97lynmsvc7jjras8"; + version = "0.2.1.0"; + sha256 = "13glk774rdd6fwi427djkc1q4xqmdf44smhp5lgv24vfwd5fffcq"; libraryHaskellDepends = [ base ]; description = "Algebraic structures"; license = stdenv.lib.licenses.bsd3; @@ -23801,29 +23849,13 @@ self: { }) {}; "algebraic-graphs" = callPackage - ({ mkDerivation, array, base, containers, criterion, extra - , QuickCheck - }: - mkDerivation { - pname = "algebraic-graphs"; - version = "0.0.5"; - sha256 = "046507r77wn4f6grxzrh2n90rnllp1inhdvn4fg9ki36k5qgqyzx"; - libraryHaskellDepends = [ array base containers ]; - testHaskellDepends = [ base containers extra QuickCheck ]; - benchmarkHaskellDepends = [ base containers criterion ]; - homepage = "https://github.com/snowleopard/alga"; - description = "A library for algebraic graph construction and transformation"; - license = stdenv.lib.licenses.mit; - }) {}; - - "algebraic-graphs_0_1_1" = callPackage ({ mkDerivation, array, base, base-compat, base-orphans, containers , criterion, deepseq, extra, QuickCheck }: mkDerivation { pname = "algebraic-graphs"; - version = "0.1.1"; - sha256 = "085yb222gh5chlpa4xylvf1wfnsdhrm1fha4jvj5bsjlx9kyr4ah"; + version = "0.1.1.1"; + sha256 = "0c8jrp0z3ibla7isbn1v5nhfka56hwq8h10r7h3vca53yzbafiw7"; libraryHaskellDepends = [ array base base-compat containers deepseq ]; @@ -23836,7 +23868,6 @@ self: { homepage = "https://github.com/snowleopard/alga"; description = "A library for algebraic graph construction and transformation"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "algebraic-prelude" = callPackage @@ -24142,16 +24173,16 @@ self: { "alsa-pcm" = callPackage ({ mkDerivation, alsa-core, alsaLib, array, base - , extensible-exceptions, sample-frame, storable-record + , extensible-exceptions, sample-frame, semigroups, storable-record }: mkDerivation { pname = "alsa-pcm"; - version = "0.6.0.4"; - sha256 = "0anafqzml5haacb7ax27a82b815rhv7nqawa7w3lb11vj1wi7bls"; + version = "0.6.1"; + sha256 = "0pafjds9xrhzwv3xz9qcknm9f2plz3bvqqjlznss1alhgf7pcga5"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - alsa-core array base extensible-exceptions sample-frame + alsa-core array base extensible-exceptions sample-frame semigroups storable-record ]; libraryPkgconfigDepends = [ alsaLib ]; @@ -24313,6 +24344,7 @@ self: { homepage = "https://oss.xkcd.com/"; description = "Implement a menu experience fit for web users"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "alure" = callPackage @@ -28384,6 +28416,8 @@ self: { pname = "arbtt"; version = "0.10.0.1"; sha256 = "0pav5q0xh90vjrj77l7vk38l38xyhqas4750il5wkpqf4f5li877"; + revision = "1"; + editedCabalFile = "1mmrv81c9gwa2gqlp0agipg5sdxm88fhiza84y2sv8vg7zf88x82"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -29529,6 +29563,18 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "asset-bundle" = callPackage + ({ mkDerivation, base, Cabal, directory, filepath }: + mkDerivation { + pname = "asset-bundle"; + version = "0.1.0.0"; + sha256 = "0fdl3dgnc5q9mv8w5g3qrhyprqhbyp4jrr5gimf9xzd67fwsnf86"; + libraryHaskellDepends = [ base Cabal directory filepath ]; + homepage = "https://github.com/deech/asset-bundle#readme"; + description = "A build-time Cabal library that bundles executables with assets"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "assimp" = callPackage ({ mkDerivation, assimp, base, c2hs, haskell98, vect }: mkDerivation { @@ -29811,6 +29857,8 @@ self: { pname = "async-pool"; version = "0.9.0.2"; sha256 = "1wg78y80zd7qyizyis073dmmvq4s67ni1pkaq31jl5klr49rs5g0"; + revision = "1"; + editedCabalFile = "0w3l3lbnfdm9ihp7pfda4sf1y1cqpc6g6q6wjzafdi088l3lklkn"; libraryHaskellDepends = [ async base containers fgl monad-control stm transformers transformers-base @@ -30367,27 +30415,27 @@ self: { ({ mkDerivation, ansi-wl-pprint, base, binary, bytestring, bzlib , Cabal, cli-setup, composition-prelude, containers, dependency , dhall, directory, file-embed, filemanip, hashable, http-client - , http-client-tls, lzma, microlens, microlens-th, mtl - , optparse-applicative, parallel-io, process, shake, shake-ats - , shake-ext, tar, temporary, text, unix, zip-archive, zlib + , http-client-tls, lens, lzma, mtl, optparse-applicative + , parallel-io, process, shake, shake-ats, shake-ext, tar, temporary + , text, unix, zip-archive, zlib }: mkDerivation { pname = "ats-pkg"; - version = "2.10.0.2"; - sha256 = "1rafsa2xc47hgkn6hwyr5bph21xl16i8ajl14pkckwhrs21bk255"; + version = "2.10.0.11"; + sha256 = "09c2nldzaqm8a203gqk6lc81gfhmvz30pxicxi9g1971y1q0nklj"; isLibrary = true; isExecutable = true; setupHaskellDepends = [ base Cabal cli-setup ]; libraryHaskellDepends = [ ansi-wl-pprint base binary bytestring bzlib Cabal composition-prelude containers dependency dhall directory - file-embed filemanip hashable http-client http-client-tls lzma - microlens microlens-th mtl parallel-io process shake shake-ats - shake-ext tar text unix zip-archive zlib + file-embed filemanip hashable http-client http-client-tls lens lzma + mtl parallel-io process shake shake-ats shake-ext tar text unix + zip-archive zlib ]; executableHaskellDepends = [ - base composition-prelude directory microlens optparse-applicative - shake shake-ats temporary text + base composition-prelude directory lens optparse-applicative shake + shake-ats temporary text ]; homepage = "https://github.com/vmchale/atspkg#readme"; description = "A build tool for ATS"; @@ -30824,19 +30872,20 @@ self: { "audacity" = callPackage ({ mkDerivation, base, bytestring, deepseq, directory - , explicit-exception, filepath, non-empty, storable-record - , storablevector, tagchup, transformers, utility-ht, xml-basic + , explicit-exception, filepath, non-empty, semigroups + , storable-record, storablevector, tagchup, transformers + , utility-ht, xml-basic }: mkDerivation { pname = "audacity"; - version = "0.0.1.2"; - sha256 = "1df9vk6f1gj0jpj3rmq63s3xjqc5p02hprfvq1nqgws0vfnp5lab"; + version = "0.0.2"; + sha256 = "1916phnj3m12apyjarmda48xr2bq19rfn7sn6nskkbg6qjqxzlnr"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base bytestring deepseq directory explicit-exception filepath - non-empty storable-record storablevector tagchup transformers - utility-ht xml-basic + non-empty semigroups storable-record storablevector tagchup + transformers utility-ht xml-basic ]; homepage = "http://hub.darcs.net/thielema/audacity"; description = "Interchange with the Audacity sound signal editor"; @@ -31398,15 +31447,15 @@ self: { "avro" = callPackage ({ mkDerivation, aeson, array, base, base16-bytestring, binary - , bytestring, containers, data-binary-ieee754, entropy, extra, fail - , hashable, hspec, lens, lens-aeson, mtl, pure-zlib, QuickCheck - , scientific, semigroups, tagged, template-haskell, text - , transformers, unordered-containers, vector + , bytestring, containers, data-binary-ieee754, directory, entropy + , extra, fail, hashable, hspec, lens, lens-aeson, mtl, pure-zlib + , QuickCheck, scientific, semigroups, tagged, template-haskell + , text, transformers, unordered-containers, vector }: mkDerivation { pname = "avro"; - version = "0.2.1.1"; - sha256 = "1y70ir44kg5awgf3x1sl584ag9ddw0mhgqniwar6lgry2ag4vz9f"; + version = "0.3.0.0"; + sha256 = "0sfi6jc7pcigpwgkfqq9ckwm7bzhfc9kf2rhznrrsy9qw5i7xrll"; libraryHaskellDepends = [ aeson array base base16-bytestring binary bytestring containers data-binary-ieee754 entropy fail hashable mtl pure-zlib scientific @@ -31414,11 +31463,11 @@ self: { ]; testHaskellDepends = [ aeson array base base16-bytestring binary bytestring containers - entropy extra fail hashable hspec lens lens-aeson mtl pure-zlib - QuickCheck scientific semigroups tagged template-haskell text - transformers unordered-containers vector + directory entropy extra fail hashable hspec lens lens-aeson mtl + pure-zlib QuickCheck scientific semigroups tagged template-haskell + text transformers unordered-containers vector ]; - homepage = "https://github.com/GaloisInc/avro.git"; + homepage = "https://github.com/GaloisInc/avro.git#readme"; description = "Avro serialization support for Haskell"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; @@ -31576,23 +31625,24 @@ self: { }) {}; "aws-cloudfront-signed-cookies" = callPackage - ({ mkDerivation, aeson, asn1-encoding, asn1-types, base - , base64-bytestring, bytestring, cookie, cryptonite - , optparse-applicative, pem, text, time, unordered-containers - , vector + ({ mkDerivation, aeson, aeson-pretty, asn1-encoding, asn1-types + , base, base64-bytestring, bytestring, cookie, cryptonite, hedgehog + , lens, lens-aeson, neat-interpolation, optparse-applicative, pem + , text, time, unordered-containers, vector }: mkDerivation { pname = "aws-cloudfront-signed-cookies"; - version = "0.1.0.1"; - sha256 = "0321c5pjd6bhvnnn8zzqk23fb14jl89vj1frvikb65iw9f60v7dl"; + version = "0.2.0.0"; + sha256 = "0cbhlxrdx09050pblca1p8f0f7n51p4nifp1xk48203ap435dnpj"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - aeson asn1-encoding asn1-types base base64-bytestring bytestring - cookie cryptonite optparse-applicative pem text time - unordered-containers vector + aeson aeson-pretty asn1-encoding asn1-types base base64-bytestring + bytestring cookie cryptonite lens lens-aeson optparse-applicative + pem text time unordered-containers vector ]; executableHaskellDepends = [ base ]; + testHaskellDepends = [ base hedgehog neat-interpolation ]; homepage = "https://github.com/typeclasses/aws-cloudfront-signed-cookies"; description = "Generate signed cookies for AWS CloudFront"; license = stdenv.lib.licenses.mit; @@ -32334,8 +32384,8 @@ self: { }: mkDerivation { pname = "b9"; - version = "0.5.43"; - sha256 = "168rgqqnxi8f39dg510nxlh813ch4dkdxxd4rymf09dkn87w1snk"; + version = "0.5.47"; + sha256 = "1jnfci7px5hf6i729mz1fbx5sfg35q8l3663ls6pkf6b4kx8qfyz"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -32407,28 +32457,6 @@ self: { }) {}; "backprop" = callPackage - ({ mkDerivation, base, bifunctors, criterion, deepseq, directory - , hmatrix, lens, microlens, mnist-idx, mwc-random, primitive - , reflection, time, transformers, type-combinators, vector - }: - mkDerivation { - pname = "backprop"; - version = "0.1.5.0"; - sha256 = "0b99krw1l574bcqxck1bqj5sb0slbm24hd85finv3v725ddy8k7f"; - libraryHaskellDepends = [ - base deepseq microlens primitive reflection transformers - type-combinators vector - ]; - benchmarkHaskellDepends = [ - base bifunctors criterion deepseq directory hmatrix lens mnist-idx - mwc-random time transformers vector - ]; - homepage = "https://github.com/mstksg/backprop#readme"; - description = "Heterogeneous automatic differentation (backpropagation)"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "backprop_0_1_5_1" = callPackage ({ mkDerivation, base, bifunctors, binary, criterion, deepseq , directory, hmatrix, lens, microlens, mnist-idx, mwc-random , primitive, reflection, time, transformers, type-combinators @@ -32449,7 +32477,6 @@ self: { homepage = "https://github.com/mstksg/backprop#readme"; description = "Heterogeneous automatic differentation (backpropagation)"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "backtracking-exceptions" = callPackage @@ -32889,12 +32916,12 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; - "base_4_11_0_0" = callPackage + "base_4_11_1_0" = callPackage ({ mkDerivation, ghc-prim, invalid-cabal-flag-settings, rts }: mkDerivation { pname = "base"; - version = "4.11.0.0"; - sha256 = "1p18cm61ql911nqfld1kc7h6qpmhfxrf1xyahik180a7rbygbkq3"; + version = "4.11.1.0"; + sha256 = "0q2ygfqy4qim8h9fmlb5iwfnf2lrly27bqqvnckdlmh775fmq07g"; libraryHaskellDepends = [ ghc-prim invalid-cabal-flag-settings rts ]; @@ -32941,6 +32968,24 @@ self: { testToolDepends = [ hspec-discover ]; description = "base-compat with extra batteries"; license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + + "base-compat-migrate" = callPackage + ({ mkDerivation, base, base-compat }: + mkDerivation { + pname = "base-compat-migrate"; + version = "0.1.0.0"; + sha256 = "1xppwdkg347k1qq4pibivv89y4k8q70bmj9fmq6qwsbkizp7hsym"; + revision = "1"; + editedCabalFile = "047zifghyzjg7c0pdbjg1r5w3d6v0pz5miifam1jrzp2pp9a2jai"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base base-compat ]; + doHaddock = false; + homepage = "https://github.com/bergmark/base-compat-migrate#readme"; + description = "Helps migrating projects to base-compat(-batteries)"; + license = stdenv.lib.licenses.bsd3; }) {}; "base-encoding" = callPackage @@ -33000,8 +33045,8 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "base-noprelude"; - version = "4.11.0.0"; - sha256 = "11q2cqy865q13hy2kc9k41cprdmlzh172prh5dhy3xp6zsbppjnh"; + version = "4.11.1.0"; + sha256 = "19d1x487kwhc60qjix7xx53dlszbx08rdhxd2zab1pwjw62ws3c8"; libraryHaskellDepends = [ base ]; doHaddock = false; homepage = "https://github.com/hvr/base-noprelude"; @@ -33623,8 +33668,8 @@ self: { }: mkDerivation { pname = "bdcs"; - version = "0.3.0"; - sha256 = "1sx5kcb85gyd59lkyjn0wq6nakz68mkwi33n4hwizzw9n9ijllv0"; + version = "0.4.0"; + sha256 = "008rd17zfg63w9szp4jrbd9z9sg4zjf4j4a5gm3skhn2nq7qaw9i"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -33730,8 +33775,8 @@ self: { }: mkDerivation { pname = "beam-core"; - version = "0.7.1.0"; - sha256 = "1k4b8a1p9ky6w5b8iwlx7pm57sdy9mj5mxinsazawc0ss3760bjh"; + version = "0.7.2.0"; + sha256 = "1m3jyz1wh9g14cv5nyklqi6v8rqxi73xnppk308lrjh00iwrvgvb"; libraryHaskellDepends = [ aeson base bytestring containers dlist free ghc-prim hashable microlens mtl network-uri tagged text time vector-sized @@ -33749,16 +33794,17 @@ self: { ({ mkDerivation, aeson, base, beam-core, bytestring, containers , deepseq, dependent-map, dependent-sum, free, ghc-prim, hashable , haskell-src-exts, mtl, parallel, pqueue, pretty, scientific, text - , time, unordered-containers, uuid, vector + , time, unordered-containers, uuid-types, vector }: mkDerivation { pname = "beam-migrate"; - version = "0.3.0.0"; - sha256 = "05j051l8zpyzdzm8w9087wj5c6yxv6mmy05asvlw2jhcjxx3j23b"; + version = "0.3.1.0"; + sha256 = "03chg3xbsvpcq4m4vvmr1jwslaj9ik8v3x8fiw8b5r6x401pf8za"; libraryHaskellDepends = [ aeson base beam-core bytestring containers deepseq dependent-map dependent-sum free ghc-prim hashable haskell-src-exts mtl parallel - pqueue pretty scientific text time unordered-containers uuid vector + pqueue pretty scientific text time unordered-containers uuid-types + vector ]; homepage = "https://travis.athougies.net/projects/beam.html"; description = "SQL DDL support and migrations support library for Beam"; @@ -33770,22 +33816,23 @@ self: { ({ mkDerivation, aeson, base, beam-core, beam-migrate, bytestring , case-insensitive, conduit, free, hashable, haskell-src-exts , lifted-base, monad-control, mtl, network-uri, postgresql-libpq - , postgresql-simple, scientific, text, time, unordered-containers - , uuid, vector + , postgresql-simple, scientific, tagged, text, time + , unordered-containers, uuid-types, vector }: mkDerivation { pname = "beam-postgres"; - version = "0.3.1.0"; - sha256 = "1nv7r50b4khx1ski5c64dywphzbn1x9xx9hp8b8zfh88i05b5jf6"; + version = "0.3.2.0"; + sha256 = "09iv1ji1kpavi42z0p4nng057h0q5f16cdsx0yiq53c3ji3yvbnf"; libraryHaskellDepends = [ aeson base beam-core beam-migrate bytestring case-insensitive conduit free hashable haskell-src-exts lifted-base monad-control - mtl network-uri postgresql-libpq postgresql-simple scientific text - time unordered-containers uuid vector + mtl network-uri postgresql-libpq postgresql-simple scientific + tagged text time unordered-containers uuid-types vector ]; homepage = "http://tathougies.github.io/beam/user-guide/backends/beam-postgres"; description = "Connection layer between beam and postgres"; license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "beam-sqlite" = callPackage @@ -33795,8 +33842,8 @@ self: { }: mkDerivation { pname = "beam-sqlite"; - version = "0.3.1.0"; - sha256 = "1frbic90nwxk8mr8s1agvx5s1v5aqfnr7sijb602spdz4hhsqsvy"; + version = "0.3.2.0"; + sha256 = "06lmsajdlqc2178p4lkgwv2hh49dmjygrfjk081sr2xbhgnslr9s"; libraryHaskellDepends = [ aeson attoparsec base beam-core beam-migrate bytestring dlist free hashable mtl network-uri scientific sqlite-simple text time unix @@ -35268,14 +35315,13 @@ self: { "bindings-GLFW" = callPackage ({ mkDerivation, base, bindings-DSL, HUnit, libGL, libX11 , libXcursor, libXext, libXfixes, libXi, libXinerama, libXrandr - , libXxf86vm, template-haskell, test-framework - , test-framework-hunit + , libXxf86vm, test-framework, test-framework-hunit }: mkDerivation { pname = "bindings-GLFW"; - version = "3.1.2.3"; - sha256 = "1xmmwxbjpxwndiacrh2mk3lih6cs8d83ax07vg5sgyp5d7qigvik"; - libraryHaskellDepends = [ base bindings-DSL template-haskell ]; + version = "3.1.2.4"; + sha256 = "0d8fjckqykvxy9fs6b7k1fb5161wfbnif5ghrc1q1nlx9ngiykkr"; + libraryHaskellDepends = [ base bindings-DSL ]; librarySystemDepends = [ libGL libX11 libXcursor libXext libXfixes libXi libXinerama libXrandr libXxf86vm @@ -35291,15 +35337,15 @@ self: { inherit (pkgs.xorg) libXinerama; inherit (pkgs.xorg) libXrandr; inherit (pkgs.xorg) libXxf86vm;}; - "bindings-GLFW_3_2_1_0" = callPackage + "bindings-GLFW_3_2_1_1" = callPackage ({ mkDerivation, base, bindings-DSL, HUnit, libGL, libX11 , libXcursor, libXext, libXfixes, libXi, libXinerama, libXrandr , libXxf86vm, test-framework, test-framework-hunit }: mkDerivation { pname = "bindings-GLFW"; - version = "3.2.1.0"; - sha256 = "1sbbms17yyrv5cmf584bc5k4bh8l2vrrhkz2693nyhkadvjxiavb"; + version = "3.2.1.1"; + sha256 = "03hn12bdqypwd6x9hxa7685bm6w86nsf6cmcwkr8zzgb41mwc93b"; libraryHaskellDepends = [ base bindings-DSL ]; librarySystemDepends = [ libGL libX11 libXcursor libXext libXfixes libXi libXinerama @@ -37581,24 +37627,6 @@ self: { }: mkDerivation { pname = "blaze-markup"; - version = "0.8.2.0"; - sha256 = "0m3h3ryxj5r74mv5g5dnfq5jbbwmvkl7ray18vi20d5vd93sydj4"; - libraryHaskellDepends = [ base blaze-builder bytestring text ]; - testHaskellDepends = [ - base blaze-builder bytestring containers HUnit QuickCheck tasty - tasty-hunit tasty-quickcheck text - ]; - homepage = "http://jaspervdj.be/blaze"; - description = "A blazingly fast markup combinator library for Haskell"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "blaze-markup_0_8_2_1" = callPackage - ({ mkDerivation, base, blaze-builder, bytestring, containers, HUnit - , QuickCheck, tasty, tasty-hunit, tasty-quickcheck, text - }: - mkDerivation { - pname = "blaze-markup"; version = "0.8.2.1"; sha256 = "0ih1c3qahkdgzbqihdhny5s313l2m66fbb88w8jbx7yz56y7rawh"; libraryHaskellDepends = [ base blaze-builder bytestring text ]; @@ -37609,7 +37637,6 @@ self: { homepage = "http://jaspervdj.be/blaze"; description = "A blazingly fast markup combinator library for Haskell"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "blaze-shields" = callPackage @@ -38992,6 +39019,7 @@ self: { homepage = "https://github.com/vmchale/brainheck#readme"; description = "Brainh*ck interpreter in haskell"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "break" = callPackage @@ -39084,7 +39112,7 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "brick_0_36" = callPackage + "brick_0_36_2" = callPackage ({ mkDerivation, base, config-ini, containers, contravariant , data-clist, deepseq, dlist, microlens, microlens-mtl , microlens-th, QuickCheck, stm, template-haskell, text @@ -39092,8 +39120,8 @@ self: { }: mkDerivation { pname = "brick"; - version = "0.36"; - sha256 = "1i1np31hncgz5cvygraxcv9x6l7yn9y3f8f92jih1im38drhp65z"; + version = "0.36.2"; + sha256 = "0zzd3lwlb60n3zdcyyqf89b066337f6qny5m4clf1fbvqiw7g771"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -39398,6 +39426,40 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {broker = null;}; + "bronyradiogermany-common" = callPackage + ({ mkDerivation, aeson, base, bytestring, network-uri, text, time + , tz, uuid-types + }: + mkDerivation { + pname = "bronyradiogermany-common"; + version = "1.0.0.1"; + sha256 = "1hwqif1jnwjhkb22j7rsc7fznvd7373gbfsl46196bb6489bbcvy"; + libraryHaskellDepends = [ + aeson base bytestring network-uri text time tz uuid-types + ]; + description = "Common types and URIs for the BronyRadioGermany API bindings"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "bronyradiogermany-streaming" = callPackage + ({ mkDerivation, aeson, base, bronyradiogermany-common, bytestring + , case-insensitive, http-types, mtl, streaming + , streaming-bytestring, streaming-utils, text, time, uuid + }: + mkDerivation { + pname = "bronyradiogermany-streaming"; + version = "1.0.0.1"; + sha256 = "1a2yz2cbjpcywis7fy5l1w3pipirh6rjfcgs1mdyhgza12qnbx09"; + libraryHaskellDepends = [ + aeson base bronyradiogermany-common bytestring case-insensitive + http-types mtl streaming streaming-bytestring streaming-utils text + time uuid + ]; + description = "Streaming interface for the BronyRadioGermany API"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "browscap" = callPackage ({ mkDerivation, base, bytestring, deepseq, ini, lens, lrucache , mtl, text, unordered-containers, wreq @@ -39825,18 +39887,15 @@ self: { "buildbox" = callPackage ({ mkDerivation, base, bytestring, containers, directory - , exceptions, mtl, old-locale, pretty, process, stm, temporary - , text, time + , exceptions, mtl, old-locale, process, stm, temporary, text, time }: mkDerivation { pname = "buildbox"; - version = "2.1.9.3"; - sha256 = "1ffvf82qmf05vxzxi70jm1yq8apv5s62nms529n6x1p5lyrwwdr5"; - revision = "1"; - editedCabalFile = "0nqhdmkmgnqgfw8vkjnwbrzrj7lvrhc0gw23p8smxkppvh6y5zv3"; + version = "2.2.1.1"; + sha256 = "19kyi8w3z3k3ydbzw5y57j6m4ffg6y9pachwzsfzjpkfczi7ds7z"; libraryHaskellDepends = [ base bytestring containers directory exceptions mtl old-locale - pretty process stm temporary text time + process stm temporary text time ]; homepage = "http://code.ouroborus.net/buildbox"; description = "Rehackable components for writing buildbots and test harnesses"; @@ -40092,13 +40151,38 @@ self: { pname = "butcher"; version = "1.3.0.0"; sha256 = "0v85ganhfljxyqy9sfmhbqnfdazikmy8a3mpg1w1y827l4a3nkng"; + revision = "1"; + editedCabalFile = "1zw355fg08p90xv3f1qcray0vz68h4sab0q2zfb3hk3j8mpplgvp"; + libraryHaskellDepends = [ + base bifunctors containers deque extra free microlens microlens-th + mtl multistate pretty transformers unsafe void + ]; + homepage = "https://github.com/lspitzner/butcher/"; + description = "Chops a command or program invocation into digestable pieces"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "butcher_1_3_1_1" = callPackage + ({ mkDerivation, base, bifunctors, containers, deque, extra, free + , hspec, microlens, microlens-th, mtl, multistate, pretty + , transformers, unsafe, void + }: + mkDerivation { + pname = "butcher"; + version = "1.3.1.1"; + sha256 = "1llhsqg8m4f7am14kvw4psm5fb8kcph27mk059vg2mq65xns470z"; libraryHaskellDepends = [ base bifunctors containers deque extra free microlens microlens-th mtl multistate pretty transformers unsafe void ]; + testHaskellDepends = [ + base containers deque extra free hspec microlens microlens-th mtl + multistate pretty transformers unsafe + ]; homepage = "https://github.com/lspitzner/butcher/"; description = "Chops a command or program invocation into digestable pieces"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "butterflies" = callPackage @@ -40161,15 +40245,15 @@ self: { }) {}; "bv-sized" = callPackage - ({ mkDerivation, base, containers, lens, parameterized-utils + ({ mkDerivation, base, containers, lens, mtl, parameterized-utils , prettyclass, QuickCheck, random }: mkDerivation { pname = "bv-sized"; - version = "0.3.0"; - sha256 = "04y99mgcgaqpzryc921nqlggfamk0jnrqv482r0hpcdf9in533bc"; + version = "0.4.0"; + sha256 = "18z4k076q0bk23di1i1hh8k0h319psh5hrh6jdv6446c7sg7v1c8"; libraryHaskellDepends = [ - base containers lens parameterized-utils prettyclass QuickCheck + base containers lens mtl parameterized-utils prettyclass QuickCheck random ]; testHaskellDepends = [ @@ -40984,6 +41068,17 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "ca" = callPackage + ({ mkDerivation, alg, base }: + mkDerivation { + pname = "ca"; + version = "0.0.0.1"; + sha256 = "0fkqbpgbbp1g6q5vjmgnfddrilyqwqsvd6w7w3vmgg6q7zdh6fy2"; + libraryHaskellDepends = [ alg base ]; + description = "Cellular Automata"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "cab" = callPackage ({ mkDerivation, attoparsec, base, bytestring, Cabal, conduit , conduit-extra, containers, directory, filepath, process @@ -41555,6 +41650,8 @@ self: { pname = "cabal-plan"; version = "0.3.0.0"; sha256 = "1axi3a60zq08d760w2x6akmszad599kij0r8zmlq8pin9mmmggls"; + revision = "1"; + editedCabalFile = "1xdmji5y2ssj8pgp0d78m8a5hd3swy2flhiaf1v9qb69502j8lwq"; configureFlags = [ "-fexe" ]; isLibrary = true; isExecutable = true; @@ -41923,8 +42020,8 @@ self: { }: mkDerivation { pname = "cabal2spec"; - version = "2.0.2"; - sha256 = "1nklzsclsyxb9y7xyrvhricmkyjhwrs7g853vlf21vbrdcnf7mfs"; + version = "2.1"; + sha256 = "0zh3xypxn78z7p7mg46ykxnmj2fv92maqx8wmclj1hqngp8ifnp3"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base Cabal filepath time ]; @@ -42217,8 +42314,8 @@ self: { }: mkDerivation { pname = "cairo"; - version = "0.13.4.2"; - sha256 = "0sm3367ikrjfzwhz1f9bkamk6i33p5cginzc9kpgw3x0lk6pbrhg"; + version = "0.13.5.0"; + sha256 = "1wxylv4d8120ri0vgar168ikqa9m6533ipdwi38qlmxmw20ws2j2"; enableSeparateDataOutput = true; setupHaskellDepends = [ base Cabal gtk2hs-buildtools ]; libraryHaskellDepends = [ @@ -43713,13 +43810,13 @@ self: { }) {}; "catamorphism" = callPackage - ({ mkDerivation, base, hspec, template-haskell }: + ({ mkDerivation, base, hspec, QuickCheck, template-haskell }: mkDerivation { pname = "catamorphism"; - version = "0.6.1.1"; - sha256 = "1bpmi4k7dfwjkg9qr70gj4y6z87jaa0q11v91wgffdmw84r341vp"; + version = "0.7.0.0"; + sha256 = "0a01nr2lk80pfv9dr4sxyixwhfpprrvbgh44901as4jnb3gcbk33"; libraryHaskellDepends = [ base template-haskell ]; - testHaskellDepends = [ base hspec ]; + testHaskellDepends = [ base hspec QuickCheck ]; homepage = "https://github.com/frerich/catamorphism"; description = "Exposes a Template Haskell function for generating catamorphisms"; license = stdenv.lib.licenses.bsd3; @@ -43846,6 +43943,28 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "cautious" = callPackage + ({ mkDerivation, aeson, base, genvalidity, genvalidity-hspec + , genvalidity-hspec-aeson, hspec, hspec-discover, QuickCheck + , transformers, validity + }: + mkDerivation { + pname = "cautious"; + version = "0.0.0.0"; + sha256 = "0kr9aipbi95hz97lbidifsfm51rsjlpjgkbvnyiwrh1cckh6q0zw"; + libraryHaskellDepends = [ + aeson base genvalidity-hspec-aeson hspec hspec-discover QuickCheck + transformers validity + ]; + testHaskellDepends = [ + aeson base genvalidity genvalidity-hspec genvalidity-hspec-aeson + hspec hspec-discover QuickCheck transformers validity + ]; + homepage = "https://github.com/Nickske666/cautious#readme"; + description = "Keep track of warnings and errors during calculations"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "cautious-file" = callPackage ({ mkDerivation, base, bytestring, directory, filepath, unix }: mkDerivation { @@ -44025,6 +44144,28 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {dttools = null;}; + "cdeps" = callPackage + ({ mkDerivation, alex, array, base, bytestring, directory, filepath + , hspec, optparse-applicative, text + }: + mkDerivation { + pname = "cdeps"; + version = "0.1.0.0"; + sha256 = "1klj3cx7cx39iyskv7fs6s28jplyn13dwv4khz79kxgg1sxd9gv5"; + revision = "2"; + editedCabalFile = "1r2ihgk5yj6xv4qc276b29gfzblksf82qdp0qg06cz590kxb8v2x"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + array base bytestring directory filepath text + ]; + libraryToolDepends = [ alex ]; + executableHaskellDepends = [ base optparse-applicative ]; + testHaskellDepends = [ base hspec ]; + description = "Extract dependencies from C code"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "cedict" = callPackage ({ mkDerivation, base, bytestring, containers, mtl, parsec , utf8-string @@ -44939,8 +45080,8 @@ self: { }: mkDerivation { pname = "chatwork"; - version = "0.1.3.1"; - sha256 = "0wsr84yk8l9s8fpb6fg4vbjyzlvy0608qply1h12zi09b5zr149i"; + version = "0.1.3.2"; + sha256 = "17wvmn2immigdbc5kbckwbl8hsali8w0mdii9mib9lfxykawyh54"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -45094,8 +45235,8 @@ self: { ({ mkDerivation, array, base, QuickCheck, random, semigroupoids }: mkDerivation { pname = "checkers"; - version = "0.4.9.5"; - sha256 = "1xaffx0vmq4swciyq3qzjfklfj19nnhd5yama9di5sas4f8v517i"; + version = "0.4.10"; + sha256 = "07ki0qrw9rdjp3y2188wnbzx4g287qdsn9dwhg69i2ajdw83kxw9"; libraryHaskellDepends = [ array base QuickCheck random semigroupoids ]; @@ -45136,6 +45277,18 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "checksum" = callPackage + ({ mkDerivation, base, explicit-exception, utility-ht }: + mkDerivation { + pname = "checksum"; + version = "0.0"; + sha256 = "0327lihvibnhs2c0gnmm13g6iaw53ka3w2j1rng4d1vnrxphyyik"; + libraryHaskellDepends = [ base explicit-exception utility-ht ]; + homepage = "http://hub.darcs.net/thielema/checksum"; + description = "Compute and verify checksums of ISBN, IBAN, etc"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "chell" = callPackage ({ mkDerivation, ansi-terminal, base, bytestring, options, patience , random, template-haskell, text, transformers @@ -47013,8 +47166,8 @@ self: { }: mkDerivation { pname = "cli-setup"; - version = "0.2.0.3"; - sha256 = "1macadfh1dqd6n2cc5rlyn74fz450livy1bg0qns3kcijqilk0p4"; + version = "0.2.0.4"; + sha256 = "0mkxm1kpbfsiv3khp8d96j9bcq7j4zbidd5ks89r69bxsmrp1z7i"; libraryHaskellDepends = [ base bytestring directory file-embed process ]; @@ -47120,6 +47273,25 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "clifm" = callPackage + ({ mkDerivation, base, brick, byteunits, directory, filepath + , optparse-applicative, pointedlist, process, time, vector, vty + }: + mkDerivation { + pname = "clifm"; + version = "0.3.1.0"; + sha256 = "17kd2cfxc9dswlqv141f2anc0g19xhj9w5mk3xicx7vyr6j43y0y"; + isLibrary = false; + isExecutable = true; + executableHaskellDepends = [ + base brick byteunits directory filepath optparse-applicative + pointedlist process time vector vty + ]; + homepage = "https://github.com/pasqu4le/clifm"; + description = "Command Line Interface File Manager"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "clingo" = callPackage ({ mkDerivation, base, bifunctors, clingo, deepseq, exceptions , hashable, mtl, StateVar, text, transformers, wl-pprint-text @@ -47390,25 +47562,27 @@ self: { "cloud-seeder" = callPackage ({ mkDerivation, aeson, amazonka, amazonka-cloudformation - , amazonka-core, base, bytestring, containers, deepseq, exceptions - , fast-logger, hspec, lens, monad-control, monad-logger, monad-mock - , mtl, optparse-applicative, text, transformers, transformers-base - , unordered-containers, uuid, yaml + , amazonka-core, amazonka-kms, amazonka-s3, base, bytestring + , containers, crypto-api, deepseq, exceptions, fast-logger, hspec + , lens, monad-control, monad-logger, monad-mock, mtl + , optparse-applicative, text, text-conversions, these, transformers + , transformers-base, unordered-containers, uuid, yaml }: mkDerivation { pname = "cloud-seeder"; - version = "0.1.0.0"; - sha256 = "1jyxbk37xzx7dgxkgrmpn7nv7v494l26f4c5r1j665cd1d8x0m4f"; + version = "0.2.0.0"; + sha256 = "0886c6lfqcvwbq3cdxpq2rg25a0p9msjxqv3ncsw02rdcww0dsqc"; libraryHaskellDepends = [ - aeson amazonka amazonka-cloudformation amazonka-core base - containers deepseq exceptions lens monad-control monad-logger mtl - optparse-applicative text transformers transformers-base + aeson amazonka amazonka-cloudformation amazonka-core amazonka-kms + amazonka-s3 base bytestring containers crypto-api deepseq + exceptions lens monad-control monad-logger mtl optparse-applicative + text text-conversions transformers transformers-base unordered-containers uuid yaml ]; testHaskellDepends = [ amazonka-cloudformation base bytestring containers deepseq fast-logger hspec lens monad-logger monad-mock mtl - optparse-applicative text transformers yaml + optparse-applicative text these transformers yaml ]; homepage = "https://github.com/cjdev/cloud-seeder#readme"; description = "A tool for interacting with AWS CloudFormation"; @@ -48327,6 +48501,18 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "coerce-util" = callPackage + ({ mkDerivation, base }: + mkDerivation { + pname = "coerce-util"; + version = "0.1.0.0"; + sha256 = "0v4ymcrqij8q9s8pcgbfrnl8y379fki3zp80lg4xqvbx0i89vsxf"; + libraryHaskellDepends = [ base ]; + homepage = "https://github.com/chessai/coerce-util.git"; + description = "utils for Data.Coerce"; + license = stdenv.lib.licenses.mit; + }) {}; + "cofunctor" = callPackage ({ mkDerivation, base }: mkDerivation { @@ -49019,6 +49205,7 @@ self: { homepage = "http://code.haskell.org/~bkomuves/"; description = "Generate and manipulate various combinatorial objects"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "combinat-diagrams" = callPackage @@ -49933,6 +50120,20 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "composition-prelude_1_4_0_1" = callPackage + ({ mkDerivation, base, cpphs }: + mkDerivation { + pname = "composition-prelude"; + version = "1.4.0.1"; + sha256 = "172fnixh4jgmwfsaxg0fyji0i745pbjwk00l3yh5pwng9swzi6ik"; + libraryHaskellDepends = [ base ]; + libraryToolDepends = [ cpphs ]; + homepage = "https://github.com/vmchale/composition-prelude#readme"; + description = "Higher-order function combinators"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "composition-tree" = callPackage ({ mkDerivation, base, doctest, QuickCheck }: mkDerivation { @@ -51815,12 +52016,29 @@ self: { license = stdenv.lib.licenses.bsd2; }) {}; + "constraints-emerge" = callPackage + ({ mkDerivation, base, constraints, containers, ghc, hashable + , hspec, transformers + }: + mkDerivation { + pname = "constraints-emerge"; + version = "0.1.2"; + sha256 = "1l3n5k8q2jfhsiqbzzbpy798zvcv2dvwsvd165c38b2yvxn6zird"; + libraryHaskellDepends = [ + base constraints containers ghc hashable + ]; + testHaskellDepends = [ base constraints hspec transformers ]; + homepage = "https://github.com/isovector/constraints-emerge"; + description = "Defer instance lookups until runtime"; + license = stdenv.lib.licenses.mit; + }) {}; + "constrictor" = callPackage ({ mkDerivation, base, transformers }: mkDerivation { pname = "constrictor"; - version = "0.1.0.2"; - sha256 = "13g8cks2bzwb0ndbak91b5k1n22i0hgza4l8i52fqhzs4addaxs3"; + version = "0.1.1.0"; + sha256 = "0vid1m5lsmpdx9bpc78ad3nk720z62chd0j9rx03laiz2fjzx2bh"; libraryHaskellDepends = [ base transformers ]; homepage = "https://github.com/chessai/constrictor.git"; description = "strict versions of many things in base"; @@ -52189,6 +52407,8 @@ self: { pname = "contravariant"; version = "1.4.1"; sha256 = "1vfhk8c5cxmmakx7rflap1ipkx5q0j5vnlrcz7yz6y53kxhksgf9"; + revision = "1"; + editedCabalFile = "0qj5nymccrb9p0cd6hffsy90jidjng14g9yv95z8v6h4q84sbzvx"; libraryHaskellDepends = [ base StateVar transformers transformers-compat ]; @@ -52684,6 +52904,7 @@ self: { homepage = "https://github.com/qfpl/coordinate"; description = "A representation of latitude and longitude"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "copilot" = callPackage @@ -53387,8 +53608,8 @@ self: { ({ mkDerivation, base, containers, parallel }: mkDerivation { pname = "cpsa"; - version = "3.4.1"; - sha256 = "1sd6h0xw76iwvgl7i4c9wy6q5fmq75inq5vh79rzf3bhmahb1529"; + version = "3.5.0"; + sha256 = "0x8l31zbgcx4idcvpjsipsc3k610hj6g6rjpxbbpaz7zcb2ykvn1"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -53465,6 +53686,7 @@ self: { homepage = "https://john-millikin.com/software/haskell-python/"; description = "Bindings for libpython"; license = stdenv.lib.licenses.gpl3; + hydraPlatforms = stdenv.lib.platforms.none; }) {inherit (pkgs) python34;}; "cql" = callPackage @@ -53922,8 +54144,8 @@ self: { }: mkDerivation { pname = "crdt"; - version = "9.3"; - sha256 = "1w1mb43hb6zn8n8r261j623jrgxx54h8jifhcby8nnfyl3h97c69"; + version = "10.0"; + sha256 = "10wg1s47r70gxgl9bfg3cxhj8w74k7wn0c3lh418mxypb2p3ffww"; libraryHaskellDepends = [ base binary bytestring containers Diff hashable mtl network-info safe stm time vector @@ -55269,8 +55491,8 @@ self: { }: mkDerivation { pname = "csound-expression"; - version = "5.2.2"; - sha256 = "05vlyd3b2kkpspp6jmxrwhv0474rw6ij6ha7jajrbqyx42a4g8bl"; + version = "5.3.1"; + sha256 = "0fwzsmb9syk144d445cw1d9pjx3vn18pxi161yafv2q7q4m57i3g"; libraryHaskellDepends = [ base Boolean colour containers csound-expression-dynamic csound-expression-opcodes csound-expression-typed data-default @@ -55304,8 +55526,8 @@ self: { }: mkDerivation { pname = "csound-expression-opcodes"; - version = "0.0.3.2"; - sha256 = "09vyvai2k6id2vsnbxnv809v2bml0v8spsrfcdg2zgnxnjv9s4s4"; + version = "0.0.4.0"; + sha256 = "1rzkv24xppysmx20x453wzxfapkic99c98jqzpf2iyfyny1qya2w"; libraryHaskellDepends = [ base csound-expression-dynamic csound-expression-typed transformers ]; @@ -55321,8 +55543,8 @@ self: { }: mkDerivation { pname = "csound-expression-typed"; - version = "0.2.0.2"; - sha256 = "1fb3wayix991awxnns6y1a9kmb6kvnay7p4rx62nvj89qa513d82"; + version = "0.2.1.0"; + sha256 = "0w591ij97i1kkv2z5fix8zlvw9shagxq6lpkic71ldpvv1a4cf8q"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base Boolean colour containers csound-expression-dynamic @@ -57454,6 +57676,25 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "data-diverse_3_0_0_0" = callPackage + ({ mkDerivation, base, containers, criterion, deepseq, ghc-prim + , hspec, tagged + }: + mkDerivation { + pname = "data-diverse"; + version = "3.0.0.0"; + sha256 = "1sxv9pyggdpwba0771vpvrawnycjrnvpayq0fjf7ly57mrdi3zd0"; + libraryHaskellDepends = [ + base containers deepseq ghc-prim tagged + ]; + testHaskellDepends = [ base hspec tagged ]; + benchmarkHaskellDepends = [ base criterion ]; + homepage = "https://github.com/louispan/data-diverse#readme"; + description = "Extensible records and polymorphic variants"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "data-diverse-lens" = callPackage ({ mkDerivation, base, data-diverse, generic-lens, hspec, lens , profunctors, tagged @@ -57473,6 +57714,26 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "data-diverse-lens_3_1_0_0" = callPackage + ({ mkDerivation, base, data-diverse, data-has, generic-lens, hspec + , lens, profunctors, tagged + }: + mkDerivation { + pname = "data-diverse-lens"; + version = "3.1.0.0"; + sha256 = "0g1cnn1kw36ac68wm8qmd8pdzjpl4xcil7shailxwawldi52v549"; + libraryHaskellDepends = [ + base data-diverse data-has generic-lens lens profunctors tagged + ]; + testHaskellDepends = [ + base data-diverse generic-lens hspec lens tagged + ]; + homepage = "https://github.com/louispan/data-diverse-lens#readme"; + description = "Isos & Lens for Data.Diverse.Many and Prisms for Data.Diverse.Which"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "data-dword" = callPackage ({ mkDerivation, base, data-bword, ghc-prim, hashable, tasty , tasty-quickcheck, template-haskell @@ -58551,10 +58812,8 @@ self: { ({ mkDerivation, base, pretty, syb }: mkDerivation { pname = "data-tree-print"; - version = "0.1.0.0"; - sha256 = "0dymdf7bv98f0xkdm49yxdn5nlbp7ahrfsadx69wzy8si537fnk5"; - revision = "1"; - editedCabalFile = "0ilk496yh0fdw2qisappr91d1s4xwl6hqaf2bnv3l7ah4qv74436"; + version = "0.1.0.1"; + sha256 = "1zh1akyf8vvsqq39vrbn95v5md5in9fvzmz2jz79adh3w5wc5j6f"; libraryHaskellDepends = [ base pretty syb ]; homepage = "https://github.com/lspitzner/data-tree-print"; description = "Print Data instances as a nested tree"; @@ -59732,8 +59991,8 @@ self: { }: mkDerivation { pname = "debian-build"; - version = "0.10.1.0"; - sha256 = "1d4h3r0v82fwiwazvcgrbv9f7nslbgw94hbsyyibsiikwpg36454"; + version = "0.10.1.1"; + sha256 = "0dv5fs0kp8qmrldly6cj0fkvab7infplii0ay23p1pbx6qjakrnk"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -60564,15 +60823,15 @@ self: { "dependency" = callPackage ({ mkDerivation, ansi-wl-pprint, base, binary, containers - , criterion, deepseq, hspec, microlens, recursion-schemes, tardis + , criterion, deepseq, hspec, lens, recursion-schemes, tardis , transformers }: mkDerivation { pname = "dependency"; - version = "0.1.0.10"; - sha256 = "1cr1h8c127sgbgjg1qy9c17aj3mfp1bh35ypv00sz19k0d6wvmly"; + version = "0.1.0.11"; + sha256 = "0nazbm1mf3agjkfc1ll0fy4jxdkb65dzx92jz15jp7xp5y10866h"; libraryHaskellDepends = [ - ansi-wl-pprint base binary containers deepseq microlens + ansi-wl-pprint base binary containers deepseq lens recursion-schemes tardis transformers ]; testHaskellDepends = [ base containers hspec ]; @@ -61740,10 +61999,8 @@ self: { }: mkDerivation { pname = "diagrams-lib"; - version = "1.4.2"; - sha256 = "1rdg8b46hc1ybk1y9dw7w725rag58rkr7hs7z3gvk4isxm11gm79"; - revision = "1"; - editedCabalFile = "0vz16br2gn4agi35k92qw84cja2dqj63g7q3ak64jhc8r99bd4a1"; + version = "1.4.2.1"; + sha256 = "17vmjcshq6kdpy4qvwabrd7yp7is7zrs6lf3zn25l2ya8a3m0a17"; libraryHaskellDepends = [ active adjunctions array base bytestring cereal colour containers data-default-class diagrams-core diagrams-solve directory @@ -61935,6 +62192,8 @@ self: { pname = "diagrams-solve"; version = "0.1.1"; sha256 = "17agchqkmj14b17sw50kzxq4hm056g5d8yy0wnqn5w8h1d0my7x4"; + revision = "1"; + editedCabalFile = "1aabxq020ycmwynm96dvqh9xbvcsw7s4593kca35i4zl2kzg14bb"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base deepseq tasty tasty-hunit tasty-quickcheck @@ -62520,15 +62779,16 @@ self: { "digit" = callPackage ({ mkDerivation, ansi-wl-pprint, base, hedgehog, lens, papa, parsec - , parsers, pretty, semigroupoids, semigroups, tasty, tasty-hedgehog - , tasty-hspec, tasty-hunit, template-haskell, text + , parsers, pretty, scientific, semigroupoids, semigroups, tasty + , tasty-hedgehog, tasty-hspec, tasty-hunit, template-haskell, text }: mkDerivation { pname = "digit"; - version = "0.5.1"; - sha256 = "141w8x7r4b3pkalqvgc71p9rdqsfg9nmhyijcg7vr5336qv52p2a"; + version = "0.5.2"; + sha256 = "18y3dln42avvzj8cxz7hkg6w106zhf64aywx23crywjhilcl5ha0"; libraryHaskellDepends = [ - base lens papa parsers semigroupoids semigroups template-haskell + base lens papa parsers scientific semigroupoids semigroups + template-haskell ]; testHaskellDepends = [ ansi-wl-pprint base hedgehog lens papa parsec parsers pretty tasty @@ -66340,17 +66600,16 @@ self: { }) {}; "dynamic-graph" = callPackage - ({ mkDerivation, base, cairo, colour, either, GLFW-b, GLUtil - , OpenGL, pango, pipes, transformers + ({ mkDerivation, base, cairo, colour, GLFW-b, GLUtil, OpenGL, pango + , pipes, transformers }: mkDerivation { pname = "dynamic-graph"; - version = "0.1.0.11"; - sha256 = "0mgciglcq8cshbcrc0ff858596zlm07z6wcmjpaa3irqbkdn7ma1"; + version = "0.1.0.12"; + sha256 = "1jygkj2jryjxlkyf0104abhkhjmfdvjaaa4zcyz7kgpny342fhiy"; enableSeparateDataOutput = true; libraryHaskellDepends = [ - base cairo colour either GLFW-b GLUtil OpenGL pango pipes - transformers + base cairo colour GLFW-b GLUtil OpenGL pango pipes transformers ]; homepage = "https://github.com/adamwalker/dynamic-graph"; description = "Draw and update graphs in real time with OpenGL"; @@ -67807,24 +68066,6 @@ self: { }: mkDerivation { pname = "ekg-statsd"; - version = "0.2.2.0"; - sha256 = "1z1si5zglmwq0qxhd4s8zmp8rps8z4xqnk4l8wlal79f1qkz9862"; - revision = "1"; - editedCabalFile = "1fnazaqdp0d7w5mfx038yv8isyw00dahis66dkyrigd57vrj3f8f"; - libraryHaskellDepends = [ - base bytestring ekg-core network text time unordered-containers - ]; - homepage = "https://github.com/tibbe/ekg-statsd"; - description = "Push metrics to statsd"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "ekg-statsd_0_2_3_0" = callPackage - ({ mkDerivation, base, bytestring, ekg-core, network, text, time - , unordered-containers - }: - mkDerivation { - pname = "ekg-statsd"; version = "0.2.3.0"; sha256 = "05lakyb0sp6g8nziy6jzk2l19v2371cdnih6pp6myyj6iflx9smf"; libraryHaskellDepends = [ @@ -67833,7 +68074,6 @@ self: { homepage = "https://github.com/tibbe/ekg-statsd"; description = "Push metrics to statsd"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "ekg-wai" = callPackage @@ -67843,25 +68083,6 @@ self: { }: mkDerivation { pname = "ekg-wai"; - version = "0.1.0.2"; - sha256 = "1ridcn930lf8gjj7lqdbhzzmz0i6r668bhid72anbq3v1h6fnhnw"; - enableSeparateDataOutput = true; - libraryHaskellDepends = [ - aeson base bytestring ekg-core ekg-json filepath http-types network - text time transformers unordered-containers wai wai-app-static warp - ]; - homepage = "https://github.com/tvh/ekg-wai"; - description = "Remote monitoring of processes"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "ekg-wai_0_1_0_3" = callPackage - ({ mkDerivation, aeson, base, bytestring, ekg-core, ekg-json - , filepath, http-types, network, text, time, transformers - , unordered-containers, wai, wai-app-static, warp - }: - mkDerivation { - pname = "ekg-wai"; version = "0.1.0.3"; sha256 = "1sd2fz4l4slizm179x9cskqdvrpf6w4d779kah9hrnk3nqbmklxz"; enableSeparateDataOutput = true; @@ -67872,7 +68093,6 @@ self: { homepage = "https://github.com/tvh/ekg-wai"; description = "Remote monitoring of processes"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "electrum-mnemonic" = callPackage @@ -69652,6 +69872,7 @@ self: { homepage = "https://github.com/mtesseract/error-context#readme"; description = "Provides API for enriching errors with contexts"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "error-continuations" = callPackage @@ -70115,15 +70336,16 @@ self: { "eternity-timestamped" = callPackage ({ mkDerivation, attoparsec, base, cereal, directory, eternity - , foldl, generic-random, hashable, potoki, QuickCheck, text, time + , generic-random, hashable, potoki, QuickCheck, text, time + , timestamp }: mkDerivation { pname = "eternity-timestamped"; - version = "0.2.5"; - sha256 = "1ndvb2gs8a9720k9wlbz01vm12s0pb4kmrkidc9w6m33985jckfa"; + version = "0.4"; + sha256 = "150xqf7kg4131qxnbjhly4ryy251gni1z6vyqcsy477hig2yv5gr"; libraryHaskellDepends = [ - attoparsec base cereal directory eternity foldl generic-random - hashable potoki QuickCheck text time + attoparsec base cereal directory eternity generic-random hashable + potoki QuickCheck text time timestamp ]; homepage = "https://github.com/metrix-ai/eternity-timestamped"; description = "Automatic timestamping for Eternity"; @@ -70141,6 +70363,8 @@ self: { pname = "ether"; version = "0.5.1.0"; sha256 = "1180l4z2cdgc6zj9pcr2c0lj28ka85kbk8sxd42fis65k2ahr61n"; + revision = "1"; + editedCabalFile = "01q86w79xswdkq08m375xwfqjgix6bzbc4lpxz4phqvzf38lc8i5"; libraryHaskellDepends = [ base exceptions mmorph monad-control mtl reflection tagged template-haskell transformers transformers-base transformers-lift @@ -71573,6 +71797,23 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "expiring-containers" = callPackage + ({ mkDerivation, base, containers, hashable, int-multimap, time + , timestamp, unordered-containers + }: + mkDerivation { + pname = "expiring-containers"; + version = "0.1.0.2"; + sha256 = "006n6zwdgrdh0717wd85kwxrbpv3fl5srbc77acglms41pcn72yz"; + libraryHaskellDepends = [ + base containers hashable int-multimap time timestamp + unordered-containers + ]; + homepage = "https://github.com/metrix-ai/expiring-containers"; + description = "Expiring containers"; + license = stdenv.lib.licenses.mit; + }) {}; + "expiring-mvar" = callPackage ({ mkDerivation, base }: mkDerivation { @@ -71912,15 +72153,15 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; - "extensible-effects_2_5_2_0" = callPackage + "extensible-effects_2_6_0_1" = callPackage ({ mkDerivation, base, criterion, HUnit, monad-control, mtl , QuickCheck, silently, test-framework, test-framework-hunit , test-framework-quickcheck2, test-framework-th, transformers-base }: mkDerivation { pname = "extensible-effects"; - version = "2.5.2.0"; - sha256 = "12rj2b1zn3lqk5anv01lf95mmadazripa6731jf3m2m5di00i4sc"; + version = "2.6.0.1"; + sha256 = "1c39hn8iskn71s3hd3af3q1xym9mzdvrjswcnyqrkibws47k2lmx"; libraryHaskellDepends = [ base monad-control transformers-base ]; testHaskellDepends = [ base HUnit monad-control QuickCheck silently test-framework @@ -71978,8 +72219,8 @@ self: { }: mkDerivation { pname = "extra"; - version = "1.6.5"; - sha256 = "05x89gclm8vw1rx4945p3asmsa28055y81nwzvgq91yr5qc4lbgi"; + version = "1.6.6"; + sha256 = "17d0fd2hng1bwgdl8ms7vzjb4zzwk8cljci5wsd5ninxi9m6x6br"; libraryHaskellDepends = [ base clock directory filepath process time unix ]; @@ -72298,8 +72539,8 @@ self: { }: mkDerivation { pname = "fake"; - version = "0.1"; - sha256 = "1q6l1nz4anq3njbs772y0mdyy6qhfza7yicxa6fkjaxzgc2dnf1m"; + version = "0.1.1"; + sha256 = "0xp737s8067bynh03d6zhi8w71pl1q8mrk5si80mykn401dzw7ir"; libraryHaskellDepends = [ base containers generics-sop random text time ]; @@ -72410,17 +72651,14 @@ self: { }) {}; "fast-arithmetic" = callPackage - ({ mkDerivation, arithmoi, ats-pkg, base, Cabal, combinat-compat - , composition-prelude, criterion, gmpint, hspec, numbertheory - , QuickCheck + ({ mkDerivation, arithmoi, base, combinat-compat + , composition-prelude, criterion, gmpint, hspec, QuickCheck }: mkDerivation { pname = "fast-arithmetic"; - version = "0.3.3.7"; - sha256 = "13kcqs7z5vwafvs5d1h14brry0dmijld0c8vz2wmaqr6ijjx86a6"; - setupHaskellDepends = [ ats-pkg base Cabal ]; + version = "0.6.0.1"; + sha256 = "1am161zrjaann9pnazsv9ic43cnw1bimqcy6vvh5qinigc33p08f"; libraryHaskellDepends = [ base composition-prelude gmpint ]; - librarySystemDepends = [ numbertheory ]; testHaskellDepends = [ arithmoi base combinat-compat hspec QuickCheck ]; @@ -72431,7 +72669,7 @@ self: { description = "Fast functions on integers"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; - }) {numbertheory = null;}; + }) {}; "fast-builder" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, criterion @@ -72452,6 +72690,7 @@ self: { homepage = "http://github.com/takano-akio/fast-builder"; description = "Fast ByteString Builder"; license = stdenv.lib.licenses.publicDomain; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "fast-combinatorics" = callPackage @@ -73319,8 +73558,8 @@ self: { pname = "feed"; version = "1.0.0.0"; sha256 = "05rgg7x1984mgfhkmz792xj8lhwjgznixhygzr8blf517lns2nck"; - revision = "3"; - editedCabalFile = "1v1kx8s1fgw0wkqbpxq9q9ky1akvvpgim2rp1s7w8vmjnxm9lwbx"; + revision = "4"; + editedCabalFile = "0baavcavm3ywykcr9cm07aqr7sna98jba2n68lyn3kany8ri214d"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base base-compat bytestring old-locale old-time safe text time @@ -75204,8 +75443,8 @@ self: { pname = "flac"; version = "0.1.2"; sha256 = "0adc88h5dmazf9m2xah0qkcav3pm0l3jiy8wbg9fxjv1qpgv74jn"; - revision = "2"; - editedCabalFile = "0pn5mw1n152i106x60gz05bnpfhn50ll005v4ihvawq5faq3h44l"; + revision = "3"; + editedCabalFile = "09xml5mv63q0wzw09s0ssjdzgnq041gr6gjhk63dr252rydnn4zh"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base bytestring containers data-default-class directory exceptions @@ -75230,6 +75469,8 @@ self: { pname = "flac-picture"; version = "0.1.1"; sha256 = "1kn1zvv5izinyidmxij7zqml94a8q52bbm2icg7704sj906gh71w"; + revision = "1"; + editedCabalFile = "02vdh61nzig0yrv6ja6fjlgfcznj5k4iqh3i5f9g5p078ycqb17w"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base bytestring flac JuicyPixels ]; testHaskellDepends = [ @@ -76081,6 +76322,35 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "fmt_0_6" = callPackage + ({ mkDerivation, base, base64-bytestring, bytestring, call-stack + , containers, criterion, deepseq, doctest, doctest-discover + , formatting, hspec, interpolate, microlens, neat-interpolation + , text, time, time-locale-compat, vector + }: + mkDerivation { + pname = "fmt"; + version = "0.6"; + sha256 = "14hk6ra8j1zzw7ibimj207mi1xl5pmln6kyz0y66j4bg1r8invsy"; + libraryHaskellDepends = [ + base base64-bytestring bytestring containers formatting microlens + text time time-locale-compat + ]; + testHaskellDepends = [ + base bytestring call-stack containers doctest hspec + neat-interpolation text vector + ]; + testToolDepends = [ doctest-discover ]; + benchmarkHaskellDepends = [ + base bytestring containers criterion deepseq formatting interpolate + text vector + ]; + homepage = "http://github.com/aelve/fmt"; + description = "A new formatting library"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "fn" = callPackage ({ mkDerivation, base, blaze-builder, bytestring, directory , filepath, hspec, http-types, resourcet, text @@ -76193,6 +76463,27 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "foldl_1_4_0" = callPackage + ({ mkDerivation, base, bytestring, comonad, containers + , contravariant, criterion, hashable, mwc-random, primitive + , profunctors, semigroups, text, transformers, unordered-containers + , vector, vector-builder + }: + mkDerivation { + pname = "foldl"; + version = "1.4.0"; + sha256 = "16vx35yl853g9ql9ncpa6r29bg5cai40s7jnpjj2d06ij9cad955"; + libraryHaskellDepends = [ + base bytestring comonad containers contravariant hashable + mwc-random primitive profunctors semigroups text transformers + unordered-containers vector vector-builder + ]; + benchmarkHaskellDepends = [ base criterion ]; + description = "Composable, streaming, and efficient left folds"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "foldl-incremental" = callPackage ({ mkDerivation, base, bytestring, containers, criterion, deepseq , foldl, histogram-fill, mwc-random, pipes, QuickCheck, tasty @@ -76772,8 +77063,8 @@ self: { }: mkDerivation { pname = "formatting"; - version = "6.3.2"; - sha256 = "1h5jy7y2cd1qaymypw8hfr52924szas0jd2hvjpbr5mrwssvhkqf"; + version = "6.3.4"; + sha256 = "1rcnnzbn1671lcwllpppgh3yv99k83y2n40r8mgsk08hsk1qs0wx"; libraryHaskellDepends = [ array base bytestring clock ghc-prim integer-gmp old-locale scientific semigroups text time transformers @@ -77815,6 +78106,17 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "freq" = callPackage + ({ mkDerivation }: + mkDerivation { + pname = "freq"; + version = "0.0.0"; + sha256 = "0vrhdmhahhxp43312864mvq38w8100970n92vjd77fj50cbh0r2i"; + doHaddock = false; + description = "TBA"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "fresco-binding" = callPackage ({ mkDerivation, base, binary, binary-serialise-cbor, bytestring , containers, text, unix @@ -78168,6 +78470,29 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "fsnotify_0_2_1_2" = callPackage + ({ mkDerivation, async, base, bytestring, containers, directory + , filepath, hinotify, tasty, tasty-hunit, temporary, text, time + , unix-compat + }: + mkDerivation { + pname = "fsnotify"; + version = "0.2.1.2"; + sha256 = "1384yksg5v1rsbbhncairxh8ahwqmg661mgc2yrcs6hbnv5jzjyp"; + libraryHaskellDepends = [ + async base bytestring containers directory filepath hinotify text + time unix-compat + ]; + testHaskellDepends = [ + async base directory filepath tasty tasty-hunit temporary + unix-compat + ]; + homepage = "https://github.com/haskell-fswatch/hfsnotify"; + description = "Cross platform library for file change notification"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "fsnotify-conduit" = callPackage ({ mkDerivation, async, base, conduit, directory, filepath , fsnotify, hspec, resourcet, temporary, transformers @@ -80344,8 +80669,8 @@ self: { pname = "generics-sop"; version = "0.3.2.0"; sha256 = "168v62i845jh9jbfaz3ldz8svz4wmzq9mf2vhb7pxlnbkk8fqq1h"; - revision = "1"; - editedCabalFile = "1cijsc0chx04i8v1n8zhlkd00dmrjq2pcpiw0y9126vmnxw5l90l"; + revision = "2"; + editedCabalFile = "0hc00hjgxm7vzq146d9kwapgqnjbhdi0c7icyvrpc2fhc4cnwlwf"; libraryHaskellDepends = [ base deepseq ghc-prim template-haskell ]; testHaskellDepends = [ base ]; description = "Generic Programming using True Sums of Products"; @@ -80617,6 +80942,20 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "genvalidity_0_5_0_0" = callPackage + ({ mkDerivation, base, hspec, QuickCheck, validity }: + mkDerivation { + pname = "genvalidity"; + version = "0.5.0.0"; + sha256 = "0s640ql6i9lr8s8m39fvjv7iz1pbcnjnvb8xsdbygb49cwk3khcz"; + libraryHaskellDepends = [ base QuickCheck validity ]; + testHaskellDepends = [ base hspec QuickCheck ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Testing utilities for the validity library"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-aeson" = callPackage ({ mkDerivation, aeson, base, genvalidity, genvalidity-hspec , genvalidity-scientific, genvalidity-text @@ -80641,6 +80980,30 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-aeson_0_2_0_0" = callPackage + ({ mkDerivation, aeson, base, genvalidity, genvalidity-hspec + , genvalidity-scientific, genvalidity-text + , genvalidity-unordered-containers, genvalidity-vector, hspec + , QuickCheck, validity, validity-aeson + }: + mkDerivation { + pname = "genvalidity-aeson"; + version = "0.2.0.0"; + sha256 = "0lwy2r7gb5s26hilgxs2hf8zcn4dhdwqhr8r05zrvjcry4inn5mm"; + libraryHaskellDepends = [ + aeson base genvalidity genvalidity-scientific genvalidity-text + genvalidity-unordered-containers genvalidity-vector QuickCheck + validity validity-aeson + ]; + testHaskellDepends = [ + aeson base genvalidity genvalidity-hspec hspec + ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "GenValidity support for aeson"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-bytestring" = callPackage ({ mkDerivation, base, bytestring, genvalidity, genvalidity-hspec , hspec, QuickCheck, validity, validity-bytestring @@ -80661,6 +81024,26 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-bytestring_0_2_0_0" = callPackage + ({ mkDerivation, base, bytestring, genvalidity, genvalidity-hspec + , hspec, QuickCheck, validity, validity-bytestring + }: + mkDerivation { + pname = "genvalidity-bytestring"; + version = "0.2.0.0"; + sha256 = "0ai3pmybs2xky8b596s0xs6511ab1h28ywbaishn5s0217q225zf"; + libraryHaskellDepends = [ + base bytestring genvalidity QuickCheck validity validity-bytestring + ]; + testHaskellDepends = [ + base bytestring genvalidity genvalidity-hspec hspec QuickCheck + ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "GenValidity support for ByteString"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-containers" = callPackage ({ mkDerivation, base, containers, genvalidity, genvalidity-hspec , hspec, QuickCheck, validity, validity-containers @@ -80702,6 +81085,27 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-hspec_0_6_0_0" = callPackage + ({ mkDerivation, base, doctest, genvalidity, genvalidity-property + , hspec, hspec-core, QuickCheck, validity + }: + mkDerivation { + pname = "genvalidity-hspec"; + version = "0.6.0.0"; + sha256 = "0pa4wx08yipr59nsdf5prh6j5pcixnxxfd9i4vm1rb4v89nws6al"; + libraryHaskellDepends = [ + base genvalidity genvalidity-property hspec hspec-core QuickCheck + validity + ]; + testHaskellDepends = [ + base doctest genvalidity hspec hspec-core QuickCheck + ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Standard spec's for GenValidity instances"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-hspec-aeson" = callPackage ({ mkDerivation, aeson, base, bytestring, deepseq, doctest , genvalidity, genvalidity-aeson, genvalidity-hspec @@ -80725,6 +81129,29 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-hspec-aeson_0_2_0_0" = callPackage + ({ mkDerivation, aeson, base, bytestring, deepseq, doctest + , genvalidity, genvalidity-aeson, genvalidity-hspec + , genvalidity-text, hspec, QuickCheck, text + }: + mkDerivation { + pname = "genvalidity-hspec-aeson"; + version = "0.2.0.0"; + sha256 = "0xkignwkq1hdyvachslwf5clzvnw0bmyi00mv3nkigxn8q1vbf7h"; + libraryHaskellDepends = [ + aeson base bytestring deepseq genvalidity genvalidity-hspec hspec + QuickCheck + ]; + testHaskellDepends = [ + aeson base doctest genvalidity genvalidity-aeson genvalidity-hspec + genvalidity-text hspec text + ]; + homepage = "http://cs-syd.eu"; + description = "Standard spec's for aeson-related instances"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-hspec-binary" = callPackage ({ mkDerivation, base, binary, deepseq, doctest, genvalidity , genvalidity-hspec, hspec, QuickCheck @@ -80743,6 +81170,24 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-hspec-binary_0_2_0_0" = callPackage + ({ mkDerivation, base, binary, deepseq, doctest, genvalidity + , genvalidity-hspec, hspec, QuickCheck + }: + mkDerivation { + pname = "genvalidity-hspec-binary"; + version = "0.2.0.0"; + sha256 = "0qmmhbka2ba9x9ypafij5q9gmmm7x4v1frf9mrfi4ffw91fnfnpv"; + libraryHaskellDepends = [ + base binary deepseq genvalidity genvalidity-hspec hspec QuickCheck + ]; + testHaskellDepends = [ base doctest genvalidity hspec ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Standard spec's for binary-related Instances"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-hspec-cereal" = callPackage ({ mkDerivation, base, cereal, deepseq, doctest, genvalidity , genvalidity-hspec, hspec, QuickCheck @@ -80761,6 +81206,24 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-hspec-cereal_0_2_0_0" = callPackage + ({ mkDerivation, base, cereal, deepseq, doctest, genvalidity + , genvalidity-hspec, hspec, QuickCheck + }: + mkDerivation { + pname = "genvalidity-hspec-cereal"; + version = "0.2.0.0"; + sha256 = "18fz57lwn6ljrm9fszb1n2jzn93kqvqi7x9fyp6a0kh733lyzrnn"; + libraryHaskellDepends = [ + base cereal deepseq genvalidity genvalidity-hspec hspec QuickCheck + ]; + testHaskellDepends = [ base doctest genvalidity hspec ]; + homepage = "http://cs-syd.eu"; + description = "Standard spec's for cereal-related instances"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-hspec-hashable" = callPackage ({ mkDerivation, base, doctest, genvalidity, genvalidity-hspec , genvalidity-property, hashable, hspec, hspec-core, QuickCheck @@ -80784,6 +81247,29 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-hspec-hashable_0_2_0_0" = callPackage + ({ mkDerivation, base, doctest, genvalidity, genvalidity-hspec + , genvalidity-property, hashable, hspec, hspec-core, QuickCheck + , validity + }: + mkDerivation { + pname = "genvalidity-hspec-hashable"; + version = "0.2.0.0"; + sha256 = "1mw3lg792hssbfasb0av9x9n7ksqcjwxpgab0n9ia1jspxacrxr4"; + libraryHaskellDepends = [ + base genvalidity genvalidity-hspec genvalidity-property hashable + hspec QuickCheck validity + ]; + testHaskellDepends = [ + base doctest genvalidity genvalidity-hspec hashable hspec + hspec-core QuickCheck + ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Standard spec's for Hashable instances"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-path" = callPackage ({ mkDerivation, base, genvalidity, genvalidity-hspec, hspec, path , validity-path @@ -80800,6 +81286,27 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-path_0_3_0_0" = callPackage + ({ mkDerivation, base, criterion, genvalidity, genvalidity-hspec + , hspec, path, QuickCheck, validity-path + }: + mkDerivation { + pname = "genvalidity-path"; + version = "0.3.0.0"; + sha256 = "00rbizzxy9ccd85gr0bf4kw6b5bz15pzhg05qzsifpjj6vfy4izf"; + libraryHaskellDepends = [ + base genvalidity path QuickCheck validity-path + ]; + testHaskellDepends = [ base genvalidity-hspec hspec path ]; + benchmarkHaskellDepends = [ + base criterion genvalidity path QuickCheck + ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "GenValidity support for Path"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-property" = callPackage ({ mkDerivation, base, directory, doctest, filepath, genvalidity , hspec, QuickCheck, validity @@ -80817,6 +81324,24 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "genvalidity-property_0_2_0_0" = callPackage + ({ mkDerivation, base, directory, doctest, filepath, genvalidity + , hspec, QuickCheck, validity + }: + mkDerivation { + pname = "genvalidity-property"; + version = "0.2.0.0"; + sha256 = "10przvvqrmjyr9cmbna79kj15wjhi0r4j64qn5824gslyy7g39pa"; + libraryHaskellDepends = [ + base genvalidity hspec QuickCheck validity + ]; + testHaskellDepends = [ base directory doctest filepath ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Standard properties for functions on `Validity` types"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-scientific" = callPackage ({ mkDerivation, base, genvalidity, genvalidity-hspec, hspec , QuickCheck, scientific, validity, validity-scientific @@ -80837,6 +81362,26 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-scientific_0_2_0_0" = callPackage + ({ mkDerivation, base, genvalidity, genvalidity-hspec, hspec + , QuickCheck, scientific, validity, validity-scientific + }: + mkDerivation { + pname = "genvalidity-scientific"; + version = "0.2.0.0"; + sha256 = "0zf0akzbggyy79h48m78cfsp82nmdgk0py8crfp81sh0pd3cydpi"; + libraryHaskellDepends = [ + base genvalidity QuickCheck scientific validity validity-scientific + ]; + testHaskellDepends = [ + base genvalidity genvalidity-hspec hspec QuickCheck scientific + ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "GenValidity support for Scientific"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-text" = callPackage ({ mkDerivation, array, base, genvalidity, genvalidity-hspec, hspec , QuickCheck, text, validity, validity-text @@ -80857,6 +81402,26 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-text_0_5_0_0" = callPackage + ({ mkDerivation, array, base, genvalidity, genvalidity-hspec, hspec + , QuickCheck, text, validity, validity-text + }: + mkDerivation { + pname = "genvalidity-text"; + version = "0.5.0.0"; + sha256 = "0vyw27l0b9snndl1nixidg8ghk6i95qv2xk59fbj1r1ybg27b837"; + libraryHaskellDepends = [ + array base genvalidity QuickCheck text validity validity-text + ]; + testHaskellDepends = [ + base genvalidity genvalidity-hspec hspec QuickCheck text + ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "GenValidity support for Text"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-time" = callPackage ({ mkDerivation, base, genvalidity, genvalidity-hspec, hspec , QuickCheck, time, validity-time @@ -80875,6 +81440,24 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-time_0_2_0_0" = callPackage + ({ mkDerivation, base, genvalidity, genvalidity-hspec, hspec + , QuickCheck, time, validity-time + }: + mkDerivation { + pname = "genvalidity-time"; + version = "0.2.0.0"; + sha256 = "04kfqs4mc9p5flr3vvb6qj3nb4agpl3hww62g7np6sl5s36cbycb"; + libraryHaskellDepends = [ + base genvalidity QuickCheck time validity-time + ]; + testHaskellDepends = [ base genvalidity-hspec hspec time ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "GenValidity support for time"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-unordered-containers" = callPackage ({ mkDerivation, base, genvalidity, genvalidity-hspec, hashable , hspec, QuickCheck, unordered-containers, validity @@ -80897,6 +81480,28 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-unordered-containers_0_2_0_0" = callPackage + ({ mkDerivation, base, genvalidity, genvalidity-hspec, hashable + , hspec, QuickCheck, unordered-containers, validity + , validity-unordered-containers + }: + mkDerivation { + pname = "genvalidity-unordered-containers"; + version = "0.2.0.0"; + sha256 = "1kfn6g3h33g215qy0iffhr35vd2np9nsf6634fjk40mbz1san0m8"; + libraryHaskellDepends = [ + base genvalidity hashable QuickCheck unordered-containers validity + validity-unordered-containers + ]; + testHaskellDepends = [ + base genvalidity genvalidity-hspec hspec unordered-containers + ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "GenValidity support for unordered-containers"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-uuid" = callPackage ({ mkDerivation, base, genvalidity, genvalidity-hspec, hspec , QuickCheck, uuid, validity, validity-uuid @@ -80917,6 +81522,26 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-uuid_0_1_0_0" = callPackage + ({ mkDerivation, base, genvalidity, genvalidity-hspec, hspec + , QuickCheck, uuid, validity, validity-uuid + }: + mkDerivation { + pname = "genvalidity-uuid"; + version = "0.1.0.0"; + sha256 = "1j4q3smhz812cfgsv6vmjgng068knd9v7xg0hkvx868wbndgk37h"; + libraryHaskellDepends = [ + base genvalidity QuickCheck uuid validity validity-uuid + ]; + testHaskellDepends = [ + base genvalidity genvalidity-hspec hspec QuickCheck uuid + ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "GenValidity support for UUID"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "genvalidity-vector" = callPackage ({ mkDerivation, base, genvalidity, genvalidity-hspec, hspec , QuickCheck, validity, validity-vector, vector @@ -80937,6 +81562,26 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "genvalidity-vector_0_2_0_0" = callPackage + ({ mkDerivation, base, genvalidity, genvalidity-hspec, hspec + , QuickCheck, validity, validity-vector, vector + }: + mkDerivation { + pname = "genvalidity-vector"; + version = "0.2.0.0"; + sha256 = "0ww3hzkzhblx8qp062vz74vwaqvv38l0sl0dwyxrqra68qglxr4f"; + libraryHaskellDepends = [ + base genvalidity QuickCheck validity validity-vector vector + ]; + testHaskellDepends = [ + base genvalidity genvalidity-hspec hspec vector + ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "GenValidity support for vector"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "geo-resolver" = callPackage ({ mkDerivation, aeson, base, base64-bytestring, blaze-builder , bytestring, http-conduit, http-types, HUnit, QuickCheck @@ -81024,17 +81669,18 @@ self: { }) {}; "geodetics" = callPackage - ({ mkDerivation, array, base, dimensional, HUnit, QuickCheck - , test-framework, test-framework-hunit, test-framework-quickcheck2 + ({ mkDerivation, array, base, checkers, dimensional, HUnit + , QuickCheck, test-framework, test-framework-hunit + , test-framework-quickcheck2 }: mkDerivation { pname = "geodetics"; - version = "0.0.4"; - sha256 = "1zml9hpbj7shzsjv6hsyzv3p9yzm6cbvxp2cd79nd1fcsdss0zi3"; + version = "0.0.5"; + sha256 = "1fpfdn4bhdqjnrhiqd8yg5j4vs3rwlsr6nav3cjrvrhynlmqlcaq"; enableSeparateDataOutput = true; libraryHaskellDepends = [ array base dimensional ]; testHaskellDepends = [ - array base dimensional HUnit QuickCheck test-framework + array base checkers dimensional HUnit QuickCheck test-framework test-framework-hunit test-framework-quickcheck2 ]; homepage = "https://github.com/PaulJohnson/geodetics"; @@ -81332,14 +81978,14 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; - "ghc-boot_8_4_1" = callPackage + "ghc-boot_8_4_2" = callPackage ({ mkDerivation, base, binary, bytestring, directory, filepath , ghc-boot-th }: mkDerivation { pname = "ghc-boot"; - version = "8.4.1"; - sha256 = "0abgzvqra66hi61bn901dlk0r0n4s2fg6y7d8w2k2a6w437vgzdd"; + version = "8.4.2"; + sha256 = "120vdlb6gyv6mndv8n3sssnif1m4zz6wrjlq9xmr2sha27pgsx9r"; libraryHaskellDepends = [ base binary bytestring directory filepath ghc-boot-th ]; @@ -81348,12 +81994,12 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; - "ghc-boot-th_8_4_1" = callPackage + "ghc-boot-th_8_4_2" = callPackage ({ mkDerivation, base }: mkDerivation { pname = "ghc-boot-th"; - version = "8.4.1"; - sha256 = "0l9fv1sp4dbq1ssw0l55riw9zpcii8fz75i0yj0vlihccf10lbj9"; + version = "8.4.2"; + sha256 = "1c7crailwqgwn7a8mqpggmkzzz7067z3hz710vx7wp71wynzj8ff"; libraryHaskellDepends = [ base ]; description = "Shared functionality between GHC and the @template-haskell@ library"; license = stdenv.lib.licenses.bsd3; @@ -81433,6 +82079,7 @@ self: { testHaskellDepends = [ base ghc ghc-paths ]; description = "A small-step semantics for Core"; license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "ghc-datasize" = callPackage @@ -82122,8 +82769,8 @@ self: { ({ mkDerivation, base, ghc }: mkDerivation { pname = "ghc-tcplugins-extra"; - version = "0.2.4"; - sha256 = "03lxph20m33ipa117i917khgk8rv3fljly3fh31j92d0l02bh9sb"; + version = "0.2.5"; + sha256 = "0xkq24dr2div9d9hr4rpz65968syqjignn9xn5q48vmzh1m1xwws"; libraryHaskellDepends = [ base ghc ]; homepage = "http://github.com/clash-lang/ghc-tcplugins-extra"; description = "Utilities for writing GHC type-checker plugins"; @@ -82192,8 +82839,8 @@ self: { }: mkDerivation { pname = "ghc-typelits-knownnat"; - version = "0.4.1"; - sha256 = "0m3flri3y82wvqania3yj7mhnnxvx8z5hxwl6mr5ppavxak169q9"; + version = "0.4.2"; + sha256 = "1h0l5hks2pdaibq4w46b9064idshan615iiyjjbzkc2zg04xsbbr"; libraryHaskellDepends = [ base ghc ghc-tcplugins-extra ghc-typelits-natnormalise template-haskell transformers @@ -82212,8 +82859,8 @@ self: { }: mkDerivation { pname = "ghc-typelits-natnormalise"; - version = "0.5.9"; - sha256 = "1aw0pgcplljll86gk9jvqc22zpnb17amamna11n9b4xzrw2lrnkg"; + version = "0.5.10"; + sha256 = "15xn69jdv77pgyd4mgm35zbrc1h0phyvw733j6s5iy01fhrhrdny"; libraryHaskellDepends = [ base ghc ghc-tcplugins-extra integer-gmp ]; @@ -82223,6 +82870,24 @@ self: { license = stdenv.lib.licenses.bsd2; }) {}; + "ghc-typelits-natnormalise_0_6" = callPackage + ({ mkDerivation, base, ghc, ghc-tcplugins-extra, integer-gmp, tasty + , tasty-hunit, template-haskell, transformers + }: + mkDerivation { + pname = "ghc-typelits-natnormalise"; + version = "0.6"; + sha256 = "0xs5d7bsyp53nzg509gs2qyfrj5fjp7bpyw3pjnnqk8d4xcgmf2w"; + libraryHaskellDepends = [ + base ghc ghc-tcplugins-extra integer-gmp transformers + ]; + testHaskellDepends = [ base tasty tasty-hunit template-haskell ]; + homepage = "http://www.clash-lang.org/"; + description = "GHC typechecker plugin for types of kind GHC.TypeLits.Nat"; + license = stdenv.lib.licenses.bsd2; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "ghc-typelits-presburger" = callPackage ({ mkDerivation, base, containers, equational-reasoning, ghc , ghc-tcplugins-extra, pretty, reflection @@ -82276,15 +82941,15 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; - "ghci_8_4_1" = callPackage + "ghci_8_4_2" = callPackage ({ mkDerivation, array, base, binary, bytestring, containers , deepseq, filepath, ghc-boot, ghc-boot-th, template-haskell , transformers, unix }: mkDerivation { pname = "ghci"; - version = "8.4.1"; - sha256 = "0jlnzkwj4xxs57c0zi3rcy96rksqakx65a7m8xq04055ip388sws"; + version = "8.4.2"; + sha256 = "0pdhy6p3axq6jwl84mcq6404r1mnld7fbyspkmzninvdd46wr74l"; libraryHaskellDepends = [ array base binary bytestring containers deepseq filepath ghc-boot ghc-boot-th template-haskell transformers unix @@ -82414,6 +83079,34 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "ghcid_0_7" = callPackage + ({ mkDerivation, ansi-terminal, base, cmdargs, containers + , directory, extra, filepath, fsnotify, process, tasty, tasty-hunit + , terminal-size, time, unix + }: + mkDerivation { + pname = "ghcid"; + version = "0.7"; + sha256 = "1dcx12vkjw5w1np4bz8ypaf8bdw1s8yrlhq6i5x2pilvsf1dljqg"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + ansi-terminal base cmdargs directory extra filepath process time + ]; + executableHaskellDepends = [ + ansi-terminal base cmdargs containers directory extra filepath + fsnotify process terminal-size time unix + ]; + testHaskellDepends = [ + ansi-terminal base cmdargs containers directory extra filepath + fsnotify process tasty tasty-hunit terminal-size time unix + ]; + homepage = "https://github.com/ndmitchell/ghcid#readme"; + description = "GHCi based bare bones IDE"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "ghcjs-ajax" = callPackage ({ mkDerivation, aeson, base, http-types, text }: mkDerivation { @@ -83458,8 +84151,8 @@ self: { }: mkDerivation { pname = "gi-webkit2"; - version = "4.0.15"; - sha256 = "1mwd5jyis7rfqpigyk1yp3rx2hkdb2gwg4m1l41dggdb8svv1jhp"; + version = "4.0.18"; + sha256 = "0qxqsg9p2380z6cyvky8g0a90v1zyf90ff9mmislnzm89fmc8013"; setupHaskellDepends = [ base Cabal haskell-gi ]; libraryHaskellDepends = [ base bytestring containers gi-atk gi-cairo gi-gdk gi-gio gi-glib @@ -83615,8 +84308,8 @@ self: { }: mkDerivation { pname = "gio"; - version = "0.13.4.1"; - sha256 = "11w567c4zafcdm5i6wpi1dr4m6mpfvyqyda4llq7wgvjbshy5fqk"; + version = "0.13.5.0"; + sha256 = "0p1mwzbrzb74wxlykasza4qvvlck2b0wgnhvfa0j3h27x4ii8xjw"; enableSeparateDataOutput = true; setupHaskellDepends = [ base Cabal gtk2hs-buildtools ]; libraryHaskellDepends = [ @@ -85066,8 +85759,8 @@ self: { }: mkDerivation { pname = "glib"; - version = "0.13.5.0"; - sha256 = "1bd6lfl8l08s28g9wky2bpyl2kh8vhycdni2wh3m7iq91madxgbj"; + version = "0.13.6.0"; + sha256 = "1sz8mvac39sxj7skw8zasbp6srm4k92223l29lll1125d8n0cwaf"; setupHaskellDepends = [ base Cabal gtk2hs-buildtools ]; libraryHaskellDepends = [ base bytestring containers text utf8-string @@ -85728,11 +86421,10 @@ self: { ({ mkDerivation, base, gmp, recursion-schemes }: mkDerivation { pname = "gmpint"; - version = "0.1.0.7"; - sha256 = "1p0iqsvx85ycd5xab73k5aaj796kqanbkjfmivslb6i6ibix02v9"; + version = "0.1.0.11"; + sha256 = "00sml2d5jbfc0qy0nvrmk9xv31zk66anzz5r4d7h049asq0zh20n"; libraryHaskellDepends = [ base recursion-schemes ]; librarySystemDepends = [ gmp ]; - homepage = "https://github.com/vmchale/gmpint#readme"; description = "GMP integer conversions"; license = stdenv.lib.licenses.bsd3; }) {inherit (pkgs) gmp;}; @@ -85797,8 +86489,8 @@ self: { }: mkDerivation { pname = "gnss-converters"; - version = "0.3.31"; - sha256 = "0raqapwms5c160n1nqjvmnzqxhimjd1aa8ji9jgb5iv37gfalv8z"; + version = "0.3.32"; + sha256 = "0b2v7msj54r6dd2w2wd4c8q6wvywnkmyddaa05r990cnbg9l4i9b"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -85848,8 +86540,8 @@ self: { }: mkDerivation { pname = "gnuplot"; - version = "0.5.5.1"; - sha256 = "1i0rlmk6kqv1lj71s1av64qc14qmaaplp6z9mxd9hkwjpwzyqdma"; + version = "0.5.5.2"; + sha256 = "1mlppnc13ygjzmf6ldydys4wvy35yb3xjwwfgf9rbi7nfcqjr6mn"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -89909,8 +90601,8 @@ self: { }: mkDerivation { pname = "gtk"; - version = "0.14.7"; - sha256 = "0fqbr1h2zxa4g6jyias163bnlsnsdhfzfansc63qzh9y10vc2hn4"; + version = "0.14.9"; + sha256 = "1khz6ymwga07h7s1k9gadf212m242l9qq09qn2fvx8v67p4wvxxz"; enableSeparateDataOutput = true; setupHaskellDepends = [ base Cabal gtk2hs-buildtools ]; libraryHaskellDepends = [ @@ -90015,16 +90707,44 @@ self: { license = stdenv.lib.licenses.gpl3; }) {}; + "gtk-sni-tray" = callPackage + ({ mkDerivation, base, bytestring, containers, dbus, directory + , gi-dbusmenugtk3, gi-gdk, gi-gdkpixbuf, gi-glib, gi-gtk, gtk-strut + , gtk3, hslogger, optparse-applicative, status-notifier-item, text + , transformers, unix + }: + mkDerivation { + pname = "gtk-sni-tray"; + version = "0.1.0.0"; + sha256 = "0a9yxhir33zg1bkv9nyazkrjawv2w9qr43n4prrifib7r976b7pj"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base bytestring containers dbus directory gi-dbusmenugtk3 gi-gdk + gi-gdkpixbuf gi-glib gi-gtk hslogger status-notifier-item text + transformers unix + ]; + libraryPkgconfigDepends = [ gtk3 ]; + executableHaskellDepends = [ + base dbus gi-gdk gi-gtk gtk-strut hslogger optparse-applicative + status-notifier-item text unix + ]; + homepage = "https://github.com/IvanMalison/gtk-sni-tray#readme"; + description = "A standalone StatusNotifierItem/AppIndicator tray"; + license = stdenv.lib.licenses.bsd3; + }) {gtk3 = pkgs.gnome3.gtk;}; + "gtk-strut" = callPackage ({ mkDerivation, base, gi-gdk, gi-gtk, text, transformers }: mkDerivation { pname = "gtk-strut"; - version = "0.1.1.0"; - sha256 = "1g88afi75a727s85v37n4mvqr5zp4849s2kc1zdx3pvc9a15i9pd"; + version = "0.1.2.0"; + sha256 = "1v73qca2qdkpvfal2ndmwrxyj1qwgxgmammkbf88azs7wcxcf7y6"; libraryHaskellDepends = [ base gi-gdk gi-gtk text transformers ]; homepage = "https://github.com/IvanMalison/gtk-strut#readme"; description = "Libary for creating strut windows with gi-gtk"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "gtk-toggle-button-list" = callPackage @@ -90070,8 +90790,8 @@ self: { }: mkDerivation { pname = "gtk2hs-buildtools"; - version = "0.13.3.1"; - sha256 = "0m3irv9cs8f602wc5lq84c7k1pd9yg4vydfzzn2qa6z0l552y3r2"; + version = "0.13.4.0"; + sha256 = "0yg6xmylgpylmnh5g33qwwn5x9bqckdvvv4czqzd9vrr12lnnghg"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -90223,8 +90943,8 @@ self: { }: mkDerivation { pname = "gtk3"; - version = "0.14.8"; - sha256 = "0sxk3dhzhqkmlwqkpvmi1b0ycyqdz19z7zfr5nxhskzn5b522ikw"; + version = "0.14.9"; + sha256 = "1rcn0x6q0r0a3waxdsyvbyzfswsi6j7yr9fsixqr1c0g334lmqa8"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -90837,6 +91557,7 @@ self: { homepage = "https://github.com/BioHaskell/hPDB"; description = "Protein Databank file format library"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hPDB-examples" = callPackage @@ -90863,6 +91584,7 @@ self: { homepage = "https://github.com/BioHaskell/hPDB-examples"; description = "Examples for hPDB library"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hPushover" = callPackage @@ -92324,8 +93046,8 @@ self: { }: mkDerivation { pname = "hadolint"; - version = "1.6.2"; - sha256 = "0nkq1qlhpd6gmrj75vik51a4fndn6sy3vwx2nk91vmdd7ml2f0v8"; + version = "1.6.5"; + sha256 = "10pn82hichabqxxk931zwqkis8p0z235ydv7dlcrl8nisj6lzda1"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -93151,6 +93873,21 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "half_0_3" = callPackage + ({ mkDerivation, base, deepseq, hspec, QuickCheck, template-haskell + }: + mkDerivation { + pname = "half"; + version = "0.3"; + sha256 = "14r0nx8hm5fic9gz0ybjjw4kyc758zfgvhhwvzsshpx5caq6zch6"; + libraryHaskellDepends = [ base deepseq template-haskell ]; + testHaskellDepends = [ base hspec QuickCheck ]; + homepage = "http://github.com/ekmett/half"; + description = "Half-precision floating-point"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "halfs" = callPackage ({ mkDerivation, array, base, bytestring, cereal, containers , directory, filepath, fingertree, HFuse, mtl, QuickCheck, random @@ -93748,8 +94485,35 @@ self: { }: mkDerivation { pname = "hapistrano"; - version = "0.3.5.3"; - sha256 = "04f7fiy4zdsl2pxb6yxq91lqgvyw0qwr9ky5sxsxj4nx40inv4d1"; + version = "0.3.5.4"; + sha256 = "02cc7bgld3cl36wq4n1c0n6gf2kbz0klj6ssfgjmjwvxvl064cg5"; + isLibrary = true; + isExecutable = true; + enableSeparateDataOutput = true; + libraryHaskellDepends = [ + base filepath formatting gitrev mtl path process time transformers + ]; + executableHaskellDepends = [ + aeson async base formatting gitrev optparse-applicative path + path-io stm yaml + ]; + testHaskellDepends = [ + base directory filepath hspec mtl path path-io process temporary + ]; + homepage = "https://github.com/stackbuilders/hapistrano"; + description = "A deployment library for Haskell applications"; + license = stdenv.lib.licenses.mit; + }) {}; + + "hapistrano_0_3_5_5" = callPackage + ({ mkDerivation, aeson, async, base, directory, filepath + , formatting, gitrev, hspec, mtl, optparse-applicative, path + , path-io, process, stm, temporary, time, transformers, yaml + }: + mkDerivation { + pname = "hapistrano"; + version = "0.3.5.5"; + sha256 = "1imgfnn58cmfi383zfi0flx8w2430f5kplsy2m27djy5fv6brmpv"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -93766,6 +94530,7 @@ self: { homepage = "https://github.com/stackbuilders/hapistrano"; description = "A deployment library for Haskell applications"; license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "happindicator" = callPackage @@ -94856,8 +95621,8 @@ self: { }: mkDerivation { pname = "hasbolt-extras"; - version = "0.0.0.4"; - sha256 = "0dclanbd07knph3bxn5a3kyl9qkqcwhy00y5jnah9sxk4qqhjkk5"; + version = "0.0.0.7"; + sha256 = "0bbyrbs1rm83sd5nsd65yxxfyz4day20hs3vz7rlkh2hjxhpvxjv"; libraryHaskellDepends = [ base containers hasbolt lens neat-interpolation template-haskell text th-lift-instances @@ -96017,8 +96782,8 @@ self: { }: mkDerivation { pname = "haskell-gi"; - version = "0.21.0"; - sha256 = "109jgixxrb9xjlkqnwkch9zgb2rj79knd8ivgfi1cc4v30299vwi"; + version = "0.21.2"; + sha256 = "0g32zgj89n1nihldvn756bz0z25h1ip8as2xvp3d10prx92i4qgi"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -96042,8 +96807,8 @@ self: { ({ mkDerivation, base, bytestring, containers, glib, text }: mkDerivation { pname = "haskell-gi-base"; - version = "0.21.0"; - sha256 = "1vrz2vrmvsbahzsp1c06x4qmny5qhbrnz5ybzh5p8z1g3ji9z166"; + version = "0.21.1"; + sha256 = "0p992mpyy9z699zpvp8i8b5v8a3jhiq6c4n29zlf7qbcxc8z4z36"; libraryHaskellDepends = [ base bytestring containers text ]; libraryPkgconfigDepends = [ glib ]; homepage = "https://github.com/haskell-gi/haskell-gi-base"; @@ -96124,25 +96889,27 @@ self: { }) {}; "haskell-igraph" = callPackage - ({ mkDerivation, base, binary, bytestring, bytestring-lexing, c2hs - , colour, data-default-class, data-ordlist, hashable, hxt, igraph - , matrices, primitive, random, split, tasty, tasty-golden - , tasty-hunit, unordered-containers + ({ mkDerivation, base, bytestring, bytestring-lexing, c2hs, cereal + , cereal-conduit, colour, conduit, data-default-class, data-ordlist + , hashable, hxt, igraph, matrices, primitive, random, split, tasty + , tasty-golden, tasty-hunit, unordered-containers }: mkDerivation { pname = "haskell-igraph"; - version = "0.3.0"; - sha256 = "1d0phlb2c7dibvs6ayvwgqslkzxmvcij7iw9mqxqk67zp12ga0pv"; + version = "0.4.0"; + sha256 = "19bhfcrfj4jxd6znqzslax6sd4w1icwp4rn3h0w31qpjv54x171f"; libraryHaskellDepends = [ - base binary bytestring bytestring-lexing colour data-default-class - hashable hxt primitive split unordered-containers + base bytestring bytestring-lexing cereal cereal-conduit colour + conduit data-default-class hashable hxt primitive split + unordered-containers ]; librarySystemDepends = [ igraph ]; libraryToolDepends = [ c2hs ]; testHaskellDepends = [ - base data-ordlist matrices random tasty tasty-golden tasty-hunit + base cereal conduit data-ordlist matrices random tasty tasty-golden + tasty-hunit ]; - description = "Imcomplete igraph bindings"; + description = "Haskell interface of the igraph library"; license = stdenv.lib.licenses.mit; hydraPlatforms = stdenv.lib.platforms.none; }) {igraph = null;}; @@ -100430,10 +101197,8 @@ self: { ({ mkDerivation, base, QuickCheck }: mkDerivation { pname = "heap"; - version = "1.0.3"; - sha256 = "00plmd5b8dlgb8324h1dbd168apfcx3hkv65rhi463a8lff7xmcv"; - revision = "1"; - editedCabalFile = "0j1f0xl3y2vqiyh3m9w5vssxyi62s6qic3zmpkm429vawyh4yad5"; + version = "1.0.4"; + sha256 = "0ahpsfmb76728w71xn4021ad7z752n6aqqgzdpcyis9i22g4ihm4"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base QuickCheck ]; description = "Heaps in Haskell"; @@ -100755,8 +101520,8 @@ self: { }: mkDerivation { pname = "hedis-config"; - version = "0.0.3"; - sha256 = "0n78gh1qz8d7xjc74bb20mvxjk4lf8acc1a3glhyr8ycw05sap2b"; + version = "1.0.0"; + sha256 = "19p0g83ybn9iajy5r8ymc8mapml34zw1a7s5hmpxdayv6slabg7r"; libraryHaskellDepends = [ aeson base bytestring hedis scientific text time ]; @@ -102583,23 +103348,19 @@ self: { ({ mkDerivation, ansi-wl-pprint, base, binary, bytestring, Chart , Chart-cairo, Chart-diagrams, colour, composition-prelude , data-binary-ieee754, data-default, directory, filepath, hspec - , lens, monad-loops, optparse-applicative + , lens, monad-loops }: mkDerivation { pname = "hgis"; - version = "0.1.3.8"; - sha256 = "10lqv0v4lnah22qwlyh1ixhcvl0abs9brlpddw0a24xdym4j0xhf"; - isLibrary = true; - isExecutable = true; + version = "1.0.0.0"; + sha256 = "1j70p3bgy8v1nzpqiv20lpxq7vxi54f9j3mwl8046hanra99wdr5"; libraryHaskellDepends = [ ansi-wl-pprint base binary bytestring Chart Chart-cairo Chart-diagrams colour composition-prelude data-binary-ieee754 data-default directory filepath lens monad-loops - optparse-applicative ]; - executableHaskellDepends = [ base ]; testHaskellDepends = [ base hspec ]; - description = "Package and command-line for GIS with Haskell"; + description = "Library and for GIS with Haskell"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; }) {}; @@ -104494,6 +105255,7 @@ self: { ]; description = "computes the internal rate of return of an investment"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hledger-lib" = callPackage @@ -104584,8 +105346,8 @@ self: { }: mkDerivation { pname = "hledger-web"; - version = "1.9"; - sha256 = "0xgd1akird9hpdrwml4dxc0vx3vzgacr5f6z19zy6q4bvnw1g58n"; + version = "1.9.1"; + sha256 = "0fkanj21ivrf5la7zxij1jws955hc0y98n2lg4qkbyw5fz54i9dj"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -104718,8 +105480,8 @@ self: { }: mkDerivation { pname = "hlint"; - version = "2.1.1"; - sha256 = "0mmfavd158l5ig5wb1b1zbhbraj8hhqvbk4mg85n6c8ndpr4grd4"; + version = "2.1.3"; + sha256 = "08i7b894vm0p8ipilvhx0pp04r6zgrf44w0mnlmsydq971y59g3a"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -104930,6 +105692,27 @@ self: { license = stdenv.lib.licenses.bsd3; }) {inherit (pkgs) openblasCompat;}; + "hmatrix_0_19_0_0" = callPackage + ({ mkDerivation, array, base, binary, bytestring, deepseq + , openblasCompat, random, semigroups, split, storable-complex + , vector + }: + mkDerivation { + pname = "hmatrix"; + version = "0.19.0.0"; + sha256 = "10jd69nby29dggghcyjk6ykyr5wrn97nrv1dkpyrp0y5xm12xssj"; + configureFlags = [ "-fdisable-default-paths" "-fopenblas" ]; + libraryHaskellDepends = [ + array base binary bytestring deepseq random semigroups split + storable-complex vector + ]; + librarySystemDepends = [ openblasCompat ]; + homepage = "https://github.com/albertoruiz/hmatrix"; + description = "Numeric Linear Algebra"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {inherit (pkgs) openblasCompat;}; + "hmatrix-backprop" = callPackage ({ mkDerivation, ANum, backprop, base, finite-typelits , ghc-typelits-knownnat, ghc-typelits-natnormalise, hedgehog @@ -104985,13 +105768,13 @@ self: { ({ mkDerivation, base, containers, glpk, hmatrix }: mkDerivation { pname = "hmatrix-glpk"; - version = "0.6.0.0"; - sha256 = "0x5ghi0rqv6zir304cjg2plpvzgihg31b5irkpf5alig6v7jdjn1"; + version = "0.19.0.0"; + sha256 = "1rbbzz1jc9r7blbqd37jb8f054xfk521q54b3srz3k34nkp05yb1"; libraryHaskellDepends = [ base containers hmatrix ]; librarySystemDepends = [ glpk ]; homepage = "https://github.com/albertoruiz/hmatrix"; description = "Linear Programming based on GLPK"; - license = "GPL"; + license = stdenv.lib.licenses.gpl3; }) {inherit (pkgs) glpk;}; "hmatrix-gsl" = callPackage @@ -105010,6 +105793,23 @@ self: { license = "GPL"; }) {inherit (pkgs) gsl;}; + "hmatrix-gsl_0_19_0_1" = callPackage + ({ mkDerivation, array, base, gsl, hmatrix, process, random, vector + }: + mkDerivation { + pname = "hmatrix-gsl"; + version = "0.19.0.1"; + sha256 = "0v6dla426x4ywaq59jm89ql1i42n39iw6z0j378xwb676v9kfxhm"; + libraryHaskellDepends = [ + array base hmatrix process random vector + ]; + libraryPkgconfigDepends = [ gsl ]; + homepage = "https://github.com/albertoruiz/hmatrix"; + description = "Numerical computation"; + license = stdenv.lib.licenses.gpl3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {inherit (pkgs) gsl;}; + "hmatrix-gsl-stats" = callPackage ({ mkDerivation, base, binary, gsl, hmatrix, storable-complex , vector @@ -105116,6 +105916,20 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "hmatrix-sparse" = callPackage + ({ mkDerivation, base, hmatrix, mkl_core, mkl_intel, mkl_sequential + }: + mkDerivation { + pname = "hmatrix-sparse"; + version = "0.19.0.0"; + sha256 = "04h9vf4aayhmjnlk8wnf9mg3rfjx9n6dhnv49vpwv7j8c4qhbd4s"; + libraryHaskellDepends = [ base hmatrix ]; + librarySystemDepends = [ mkl_core mkl_intel mkl_sequential ]; + homepage = "https://github.com/albertoruiz/hmatrix"; + description = "Sparse linear solver"; + license = stdenv.lib.licenses.bsd3; + }) {mkl_core = null; mkl_intel = null; mkl_sequential = null;}; + "hmatrix-special" = callPackage ({ mkDerivation, base, hmatrix, hmatrix-gsl }: mkDerivation { @@ -105128,6 +105942,19 @@ self: { license = "GPL"; }) {}; + "hmatrix-special_0_19_0_0" = callPackage + ({ mkDerivation, base, hmatrix, hmatrix-gsl }: + mkDerivation { + pname = "hmatrix-special"; + version = "0.19.0.0"; + sha256 = "1mywr61kr852sbff26n9x95kswx9l4ycbv6s68qsbkh02xzqq7qz"; + libraryHaskellDepends = [ base hmatrix hmatrix-gsl ]; + homepage = "https://github.com/albertoruiz/hmatrix"; + description = "Interface to GSL special functions"; + license = stdenv.lib.licenses.gpl3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "hmatrix-static" = callPackage ({ mkDerivation, array, base, haskell-src-meta, hmatrix, parsec , template-haskell, tfp @@ -105145,6 +105972,29 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "hmatrix-sundials" = callPackage + ({ mkDerivation, base, containers, diagrams-lib + , diagrams-rasterific, hmatrix, hspec, inline-c, lens, plots + , sundials_arkode, template-haskell, vector + }: + mkDerivation { + pname = "hmatrix-sundials"; + version = "0.19.0.0"; + sha256 = "03pil8zkkixlgv2m07zyiyribpkphhl75ixvazb36c6rznvkg6nd"; + libraryHaskellDepends = [ + base containers hmatrix inline-c template-haskell vector + ]; + librarySystemDepends = [ sundials_arkode ]; + testHaskellDepends = [ + base containers diagrams-lib diagrams-rasterific hmatrix hspec + inline-c lens plots template-haskell vector + ]; + testSystemDepends = [ sundials_arkode ]; + homepage = "https://github.com/idontgetoutmuch/hmatrix/tree/sundials"; + description = "hmatrix interface to sundials"; + license = stdenv.lib.licenses.bsd3; + }) {sundials_arkode = null;}; + "hmatrix-svdlibc" = callPackage ({ mkDerivation, base, criterion, hmatrix, hspec, QuickCheck , vector @@ -105184,8 +106034,8 @@ self: { }: mkDerivation { pname = "hmatrix-tests"; - version = "0.6.0.0"; - sha256 = "1my4w6nxlwizlysk4ika9xaqjjgjxi2lal83zqgjkc05jxs1p9ih"; + version = "0.19.0.0"; + sha256 = "18adrcwd8zgw8x9dn5fvpjq4l88iqvlm5z0yxzr96zppi8z5w6fw"; libraryHaskellDepends = [ base binary deepseq hmatrix hmatrix-gsl HUnit QuickCheck random ]; @@ -106479,8 +107329,8 @@ self: { }: mkDerivation { pname = "hoogle"; - version = "5.0.17.2"; - sha256 = "009brgwczkszmlk8rq6s5s73rnpi2gw94wr9wwp9rgf3r2cfs1br"; + version = "5.0.17.3"; + sha256 = "174gp41v0krzj37m75pnr3aawyhkbk2wq4q6zk2z3zh0avvvmgk6"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -107507,8 +108357,8 @@ self: { }: mkDerivation { pname = "hpath"; - version = "0.9.0"; - sha256 = "1d0f58xvqpr5d9n3n8wpy5x59mfh57al4bvpllfmb6a6dm514k4d"; + version = "0.9.2"; + sha256 = "1b8fni11zk3p3yx6pi9sx6cxq9vm31fqx3gm7y6nz5cykpncsx27"; libraryHaskellDepends = [ base bytestring deepseq exceptions hspec IfElse simple-sendfile unix unix-bytestring utf8-string word8 @@ -107574,6 +108424,22 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "hpc-threshold" = callPackage + ({ mkDerivation, base, bytestring, interpolate, pcre-heavy }: + mkDerivation { + pname = "hpc-threshold"; + version = "0.1.0.0"; + sha256 = "113m7fpm4zffvzwnqjzd45mbc18acgj5c1b9z5hqwklygjjjpx4a"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base bytestring interpolate pcre-heavy ]; + executableHaskellDepends = [ base ]; + testHaskellDepends = [ base ]; + homepage = "https://github.com/eckyputrady/hpc-threshold#readme"; + description = "Small utility for validating whether HPC result is above defined thresholds"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "hpc-tracer" = callPackage ({ mkDerivation, array, base, containers, haskell98, hpc, network , parsec, pretty, process, unix @@ -108809,17 +109675,17 @@ self: { "hs2ats" = callPackage ({ mkDerivation, ansi-wl-pprint, base, casing, composition-prelude , cpphs, criterion, deepseq, haskell-src-exts, hspec - , hspec-dirstream, language-ats, microlens, system-filepath + , hspec-dirstream, language-ats, lens, system-filepath }: mkDerivation { pname = "hs2ats"; - version = "0.3.0.0"; - sha256 = "1s92riisihcqim6hy4sa4z3dhk92dp2iyn32j0jl0qlpzdlbj4cp"; + version = "0.3.0.1"; + sha256 = "1z8afx8bc9igd0iv6anw635zfj6vwqq10kp4j95p3fs58wyjg21v"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ ansi-wl-pprint base casing composition-prelude cpphs deepseq - haskell-src-exts language-ats microlens + haskell-src-exts language-ats lens ]; testHaskellDepends = [ base hspec hspec-dirstream system-filepath @@ -108949,6 +109815,7 @@ self: { ]; description = "OASIS Security Assertion Markup Language (SAML) V2.0"; license = stdenv.lib.licenses.asl20; + hydraPlatforms = stdenv.lib.platforms.none; }) {inherit (pkgs) libxml2;}; "hsass" = callPackage @@ -113011,8 +113878,8 @@ self: { }: mkDerivation { pname = "http-client"; - version = "0.5.12"; - sha256 = "1m4c4zyl8y3i8bzyrgqv9kcjqzj17rwnf49dvn6745bn8kiyq6v0"; + version = "0.5.12.1"; + sha256 = "0gnnkcy2d2v1k44ip59s7l86jgigllsp3lsqsac08zr19lr1clab"; libraryHaskellDepends = [ array base blaze-builder bytestring case-insensitive containers cookie deepseq exceptions filepath ghc-prim http-types memory @@ -113265,35 +114132,6 @@ self: { }: mkDerivation { pname = "http-conduit"; - version = "2.3.0"; - sha256 = "0z9158a27g6kg7vbhkiw6icb2wgzb3lhsifgg5yh6wph5cd40fx4"; - libraryHaskellDepends = [ - aeson base bytestring conduit conduit-extra http-client - http-client-tls http-types mtl resourcet transformers unliftio-core - ]; - testHaskellDepends = [ - aeson base blaze-builder bytestring case-insensitive conduit - conduit-extra connection cookie data-default-class hspec - http-client http-types HUnit network resourcet streaming-commons - temporary text time transformers unliftio utf8-string wai - wai-conduit warp warp-tls - ]; - doCheck = false; - homepage = "http://www.yesodweb.com/book/http-conduit"; - description = "HTTP client package with conduit interface and HTTPS support"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "http-conduit_2_3_1" = callPackage - ({ mkDerivation, aeson, base, blaze-builder, bytestring - , case-insensitive, conduit, conduit-extra, connection, cookie - , data-default-class, hspec, http-client, http-client-tls - , http-types, HUnit, mtl, network, resourcet, streaming-commons - , temporary, text, time, transformers, unliftio, unliftio-core - , utf8-string, wai, wai-conduit, warp, warp-tls - }: - mkDerivation { - pname = "http-conduit"; version = "2.3.1"; sha256 = "0nbq3xklz5nfc4k50qj413q2acwcbs0g5am4pncbjhiamgqc6lc2"; libraryHaskellDepends = [ @@ -113311,7 +114149,6 @@ self: { homepage = "http://www.yesodweb.com/book/http-conduit"; description = "HTTP client package with conduit interface and HTTPS support"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "http-conduit-browser" = callPackage @@ -113368,9 +114205,9 @@ self: { }: mkDerivation { pname = "http-date"; - version = "0.0.6.1"; - sha256 = "0dknh28kyarnzqrsc80ssalxjrq0qbv7ir49247p2grb7rh0dqgj"; - libraryHaskellDepends = [ array attoparsec base bytestring ]; + version = "0.0.7"; + sha256 = "1hpzs646qqzp2g2qy7rx1bf3knf1hw38n82vcq6bs4mm1xzdryff"; + libraryHaskellDepends = [ array attoparsec base bytestring time ]; testHaskellDepends = [ base bytestring doctest hspec old-locale time ]; @@ -114833,8 +115670,8 @@ self: { ({ mkDerivation, base, call-stack, hedgehog, hspec, HUnit }: mkDerivation { pname = "hw-hspec-hedgehog"; - version = "0.1.0.3"; - sha256 = "0bnqvbh8jkpnannfgx1ghv5b4qvj37w1p29ap730s2bbfpsaldq2"; + version = "0.1.0.4"; + sha256 = "1vlrrskalip7a477px7imwy9yifvdx7c03zrgk90rlarivwkggaq"; libraryHaskellDepends = [ base call-stack hedgehog hspec HUnit ]; testHaskellDepends = [ base hedgehog hspec ]; homepage = "https://github.com/haskell-works/hw-hspec-hedgehog#readme"; @@ -114854,6 +115691,19 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "hw-ip" = callPackage + ({ mkDerivation, base, hedgehog, hspec, hw-hspec-hedgehog }: + mkDerivation { + pname = "hw-ip"; + version = "0.1.0.0"; + sha256 = "1gw0g6xd6q2rbnpb8j2yi8ddq39r2l8rplx8nfwk9mqzpgxx0r1n"; + libraryHaskellDepends = [ base ]; + testHaskellDepends = [ base hedgehog hspec hw-hspec-hedgehog ]; + homepage = "https://github.com/haskell-works/hw-ip#readme"; + description = "Library for manipulating IP addresses and CIDR blocks"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "hw-json" = callPackage ({ mkDerivation, ansi-wl-pprint, array, attoparsec, base , bytestring, conduit, containers, criterion, dlist, hspec @@ -114967,8 +115817,8 @@ self: { }: mkDerivation { pname = "hw-kafka-client"; - version = "2.4.1"; - sha256 = "0mhi85czipxk0mxrzxchljabhkiq5a6y3xn9k5rivi2dgy28mrrk"; + version = "2.4.3"; + sha256 = "18pyayl0xyb045db5584cfbbvzvmkwm3zkpvks30vrz9sb5jx1qd"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -115060,16 +115910,46 @@ self: { }) {}; "hw-prim" = callPackage - ({ mkDerivation, base, bytestring, hspec, QuickCheck, vector }: + ({ mkDerivation, base, bytestring, criterion, directory, exceptions + , hedgehog, hspec, hw-hspec-hedgehog, mmap, QuickCheck, vector + }: mkDerivation { pname = "hw-prim"; - version = "0.5.0.0"; - sha256 = "00sivy11g7haafpqy12sxgslffw841bx0i25phaz5vcfwp5xrp9j"; - libraryHaskellDepends = [ base bytestring vector ]; - testHaskellDepends = [ base bytestring hspec QuickCheck vector ]; + version = "0.5.0.2"; + sha256 = "0pqg7a46j63n8gp4c2hsxh98f0xppfhaww00zbjy45zx8h2gb1qm"; + libraryHaskellDepends = [ base bytestring mmap vector ]; + testHaskellDepends = [ + base bytestring directory exceptions hedgehog hspec + hw-hspec-hedgehog mmap QuickCheck vector + ]; + benchmarkHaskellDepends = [ + base bytestring criterion mmap vector + ]; + homepage = "http://github.com/haskell-works/hw-prim#readme"; + description = "Primitive functions and data types"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "hw-prim_0_5_0_3" = callPackage + ({ mkDerivation, base, bytestring, criterion, directory, exceptions + , hedgehog, hspec, hw-hspec-hedgehog, mmap, QuickCheck, vector + }: + mkDerivation { + pname = "hw-prim"; + version = "0.5.0.3"; + sha256 = "1cnh8qm4kz4fxh34wn9039dxbb54mwhkls21m5s73q773q9fx4rz"; + libraryHaskellDepends = [ base bytestring mmap vector ]; + testHaskellDepends = [ + base bytestring directory exceptions hedgehog hspec + hw-hspec-hedgehog mmap QuickCheck vector + ]; + benchmarkHaskellDepends = [ + base bytestring criterion mmap vector + ]; homepage = "http://github.com/haskell-works/hw-prim#readme"; description = "Primitive functions and data types"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hw-prim-bits" = callPackage @@ -115091,6 +115971,7 @@ self: { homepage = "https://github.com/githubuser/hw-prim-bits#readme"; description = "Primitive support for bit manipulation"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hw-rankselect" = callPackage @@ -115433,6 +116314,7 @@ self: { homepage = "https://github.com/srijs/hwsl2"; description = "Hashing with SL2"; license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hwsl2-bytevector" = callPackage @@ -115445,6 +116327,7 @@ self: { homepage = "https://github.com/srijs/hwsl2-haskell-bytevector"; description = "A hashed byte-vector based on algebraic hashes and finger trees"; license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hwsl2-reducers" = callPackage @@ -115459,6 +116342,7 @@ self: { homepage = "https://github.com/srijs/hwsl2-reducers"; description = "Semigroup and Reducer instances for Data.Hash.SL2"; license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hx" = callPackage @@ -117947,6 +118831,22 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "immortal_0_3" = callPackage + ({ mkDerivation, base, stm, tasty, tasty-hunit, transformers + , unliftio-core + }: + mkDerivation { + pname = "immortal"; + version = "0.3"; + sha256 = "120znjn7jrmcnzgka8zbiih4g8imh732iivjdzzbpj1kgywrvj0i"; + libraryHaskellDepends = [ base stm unliftio-core ]; + testHaskellDepends = [ base stm tasty tasty-hunit transformers ]; + homepage = "https://github.com/feuerbach/immortal"; + description = "Spawn threads that never die (unless told to do so)"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "imparse" = callPackage ({ mkDerivation, ascetic, base, compilation, containers, directory , indents, MissingH, parsec, richreports, split, staticanalysis @@ -118274,10 +119174,8 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "inchworm"; - version = "1.0.2.1"; - sha256 = "19fx9nrx1jia4qz3rhjsdmmmas7bn5rl59b2y2lnzyyz6n83sfzc"; - revision = "1"; - editedCabalFile = "0yg8x27fk0kr99ways4h64a5wbxmnh59l8mis9xd0faqx7hadic7"; + version = "1.0.2.2"; + sha256 = "0r8a8hg3fzfc619zsjdnid1la0njnfrijhqfgqjmis4ncivah52h"; libraryHaskellDepends = [ base ]; homepage = "https://github.com/DDCSF/inchworm"; description = "Inchworm Lexer Framework"; @@ -118578,6 +119476,20 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "indexed-list-literals_0_2_0_0" = callPackage + ({ mkDerivation, base, Only }: + mkDerivation { + pname = "indexed-list-literals"; + version = "0.2.0.0"; + sha256 = "0n0j5x4v099000fm2ar0lmn06f21gnq39srmimy9bm3zisx8zmzd"; + libraryHaskellDepends = [ base Only ]; + testHaskellDepends = [ base ]; + homepage = "https://github.com/davidm-d/indexed-list-literals"; + description = "Type safe indexed list literals"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "indextype" = callPackage ({ mkDerivation, base, hspec }: mkDerivation { @@ -118802,23 +119714,24 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "influxdb_1_5_1" = callPackage + "influxdb_1_6_0_1" = callPackage ({ mkDerivation, aeson, attoparsec, base, bytestring, Cabal , cabal-doctest, clock, containers, doctest, foldl, http-client , http-types, HUnit, lens, mtl, network, optional-args, QuickCheck - , scientific, tasty, tasty-hunit, tasty-quickcheck, tasty-th - , template-haskell, text, time, unordered-containers, vector + , scientific, tagged, tasty, tasty-hunit, tasty-quickcheck + , tasty-th, template-haskell, text, time, unordered-containers + , vector }: mkDerivation { pname = "influxdb"; - version = "1.5.1"; - sha256 = "1gxhd5ywz27z6jkx9bdmqsjafl2j0wk5vmrclz7l7hwfnn5553c7"; + version = "1.6.0.1"; + sha256 = "14xk27qg5w7pdrmbz7fys96x4yywv0hk82z46802dlnxlfpikyc3"; isLibrary = true; isExecutable = true; setupHaskellDepends = [ base Cabal cabal-doctest ]; libraryHaskellDepends = [ aeson attoparsec base bytestring clock containers foldl http-client - http-types lens network optional-args scientific text time + http-types lens network optional-args scientific tagged text time unordered-containers vector ]; testHaskellDepends = [ @@ -118863,8 +119776,8 @@ self: { ({ mkDerivation, attoparsec, base, text, unordered-containers }: mkDerivation { pname = "ini"; - version = "0.3.5"; - sha256 = "1iicavbjr4qmlcdxh32cgqxlxd80xvzyxxskrs3hji1qzrnq7lxz"; + version = "0.3.6"; + sha256 = "1n9wsl7nz910bc8jx9ps7pvpql4hlnryjkqbdpfq0phjb9sf7fzw"; libraryHaskellDepends = [ attoparsec base text unordered-containers ]; @@ -119387,14 +120300,27 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "integer-gmp_1_0_1_0" = callPackage + "int-multimap" = callPackage + ({ mkDerivation, base, containers, hashable, unordered-containers + }: + mkDerivation { + pname = "int-multimap"; + version = "0.1.0.1"; + sha256 = "0xi0n9hhra6pzqnxahf109qgifxnsgvc9v9jl0qmnxzz5yki1pvg"; + libraryHaskellDepends = [ + base containers hashable unordered-containers + ]; + homepage = "https://github.com/metrix-ai/int-multimap"; + description = "A data structure that associates each Int key with a set of values"; + license = stdenv.lib.licenses.mit; + }) {}; + + "integer-gmp_1_0_2_0" = callPackage ({ mkDerivation, ghc-prim }: mkDerivation { pname = "integer-gmp"; - version = "1.0.1.0"; - sha256 = "1xrdqksharn0jg8m1d7zm8nhbsq3abw2k25kzw0z7m0zm14n1nlw"; - revision = "1"; - editedCabalFile = "02xp5ldq3xxx1qdxg7gbs2zcqpf1dxbdrvrzizxnjwhpiqxcigy3"; + version = "1.0.2.0"; + sha256 = "1aaz2mdmwbrfxahhycpiz92hdvfn9mm7964wfypf8m0m8libhs6k"; libraryHaskellDepends = [ ghc-prim ]; description = "Integer library based on GMP"; license = stdenv.lib.licenses.bsd3; @@ -119958,15 +120884,15 @@ self: { "invertible" = callPackage ({ mkDerivation, base, haskell-src-meta, invariant, lens , partial-isomorphisms, QuickCheck, semigroupoids, template-haskell - , transformers, TypeCompose + , transformers }: mkDerivation { pname = "invertible"; - version = "0.2.0.4"; - sha256 = "0hrg58p5yz97n2xi9mbad69skldr163mr1wdvykdsvwyyxhfl4q4"; + version = "0.2.0.5"; + sha256 = "1fwdbg0pimi9hfyp20fsvyxpicjd7jxg4vsh5kykkxviyfhxl2ha"; libraryHaskellDepends = [ base haskell-src-meta invariant lens partial-isomorphisms - semigroupoids template-haskell transformers TypeCompose + semigroupoids template-haskell transformers ]; testHaskellDepends = [ base QuickCheck transformers ]; description = "bidirectional arrows, bijective functions, and invariant functors"; @@ -120491,8 +121417,8 @@ self: { }: mkDerivation { pname = "iproute"; - version = "1.7.3"; - sha256 = "0zhfn0rxwakspx1b9pxcqb9vbi8lr786hhb5s9j15xiszkl8hf4s"; + version = "1.7.4"; + sha256 = "17gcmw9m8c30cm3j5hdcqhpkvbir9js1k6s3ad141yszxymmnq8q"; libraryHaskellDepends = [ appar base byteorder containers network ]; @@ -123917,8 +124843,8 @@ self: { }: mkDerivation { pname = "judy"; - version = "0.4.0"; - sha256 = "115991jvp9gg9iy3n8p8y0y39x236v17g5xqchmlfsja1nx9hbzc"; + version = "0.4.1"; + sha256 = "0inm77n75066jcjw820cdpklqjfy76i7by4qz136c83x2x7w6fsm"; libraryHaskellDepends = [ base bytestring ghc-prim ]; librarySystemDepends = [ Judy ]; testHaskellDepends = [ base hspec QuickCheck ]; @@ -124182,6 +125108,34 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "jwt_0_8_0" = callPackage + ({ mkDerivation, aeson, base, bytestring, containers, cryptonite + , doctest, HsOpenSSL, http-types, HUnit, lens, lens-aeson, memory + , network-uri, QuickCheck, RSA, scientific, semigroups, tasty + , tasty-hunit, tasty-quickcheck, tasty-th, text, time + , unordered-containers, vector + }: + mkDerivation { + pname = "jwt"; + version = "0.8.0"; + sha256 = "0ij921vgm0sqlc2ryymqxz6ipgl2iwm0916ny7g5l47qh2fjhcjg"; + libraryHaskellDepends = [ + aeson base bytestring containers cryptonite HsOpenSSL http-types + memory network-uri RSA scientific semigroups text time + unordered-containers vector + ]; + testHaskellDepends = [ + aeson base bytestring containers cryptonite doctest HsOpenSSL + http-types HUnit lens lens-aeson memory network-uri QuickCheck RSA + scientific semigroups tasty tasty-hunit tasty-quickcheck tasty-th + text time unordered-containers vector + ]; + homepage = "https://bitbucket.org/ssaasen/haskell-jwt"; + description = "JSON Web Token (JWT) decoding and encoding"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "kademlia" = callPackage ({ mkDerivation, base, bytestring, containers, HUnit, mtl, network , QuickCheck, stm, tasty, tasty-hunit, tasty-quickcheck @@ -125451,8 +126405,8 @@ self: { ({ mkDerivation, base, hspec }: mkDerivation { pname = "key-state"; - version = "0.1.0"; - sha256 = "0q5pfayi02xhka2xdn2nwng1cms0lyh6pbysvpxsmbiwzq80p4kp"; + version = "0.2.0"; + sha256 = "1n8bp8g2w16mb7ifafx4ypyx393lra4r2vnnmasxjc22fvyiwvsl"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base hspec ]; homepage = "https://github.com/jxv/key-state#readme"; @@ -127129,8 +128083,8 @@ self: { pname = "lame"; version = "0.1.1"; sha256 = "0j35zpfhppb09m6h23awxgsawisvgsnrw7d99f5z3xq2bjihjq5k"; - revision = "3"; - editedCabalFile = "041hv4z4xxqidnlr5jgkwp13vj4lr9dvqlrgavl3dmsd07vfj0bc"; + revision = "4"; + editedCabalFile = "0r364limqm570a8xd82wwpcvmcx2j7nfndg5kad022vz2v5n0smz"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base bytestring data-default-class directory exceptions filepath @@ -127195,17 +128149,17 @@ self: { "language-ats" = callPackage ({ mkDerivation, alex, ansi-wl-pprint, array, base , composition-prelude, containers, cpphs, criterion, deepseq, happy - , hspec, hspec-dirstream, microlens, microlens-th - , recursion-schemes, system-filepath, transformers + , hspec, hspec-dirstream, lens, recursion-schemes, system-filepath + , transformers }: mkDerivation { pname = "language-ats"; - version = "1.2.0.6"; - sha256 = "0g1yq11pml5pkpszbzdqkhj172v9zyw8mbf9bl97p883p55p0nxa"; + version = "1.2.0.8"; + sha256 = "0609xpjcq294ypjq4blw1cb3a6jnjzm9gwzr54dnp3afhindbq3m"; enableSeparateDataOutput = true; libraryHaskellDepends = [ ansi-wl-pprint array base composition-prelude containers deepseq - microlens microlens-th recursion-schemes transformers + lens recursion-schemes transformers ]; libraryToolDepends = [ alex cpphs happy ]; testHaskellDepends = [ @@ -127452,15 +128406,15 @@ self: { license = stdenv.lib.licenses.gpl3; }) {}; - "language-docker_4_0_1" = callPackage + "language-docker_5_0_0" = callPackage ({ mkDerivation, base, bytestring, directory, filepath, free, Glob , hspec, HUnit, mtl, parsec, pretty, process, QuickCheck, split , template-haskell, text, th-lift, time }: mkDerivation { pname = "language-docker"; - version = "4.0.1"; - sha256 = "0z1jifvinq90qh4106azd6ss80ds5p8acvl8x73j4zmqpn2d95xa"; + version = "5.0.0"; + sha256 = "16shdy1dh0bsalj0ciwg7h9dkjfjgkrfmq7g81z3k8fgy1w2y81n"; libraryHaskellDepends = [ base bytestring free mtl parsec pretty split template-haskell text th-lift time @@ -127544,6 +128498,32 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "language-ecmascript_0_18" = callPackage + ({ mkDerivation, ansi-wl-pprint, base, charset, containers + , data-default-class, Diff, directory, filepath, HUnit, mtl, parsec + , QuickCheck, template-haskell, test-framework + , test-framework-hunit, test-framework-quickcheck2, testing-feat + , uniplate + }: + mkDerivation { + pname = "language-ecmascript"; + version = "0.18"; + sha256 = "0gg608hniq1v7f1d56akyk44zyrmd0acr33m53cbdlcq8w1c8h70"; + libraryHaskellDepends = [ + ansi-wl-pprint base charset containers data-default-class Diff mtl + parsec QuickCheck template-haskell testing-feat uniplate + ]; + testHaskellDepends = [ + ansi-wl-pprint base containers data-default-class Diff directory + filepath HUnit mtl parsec QuickCheck test-framework + test-framework-hunit test-framework-quickcheck2 uniplate + ]; + homepage = "http://github.com/jswebtools/language-ecmascript"; + description = "JavaScript parser and pretty-printer library"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "language-ecmascript-analysis" = callPackage ({ mkDerivation, base, containers, language-ecmascript, parsec , uniplate @@ -127969,6 +128949,7 @@ self: { homepage = "https://github.com/blamario/language-oberon"; description = "Parser and pretty-printer for the Oberon programming language"; license = stdenv.lib.licenses.gpl3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "language-objc" = callPackage @@ -128071,7 +129052,7 @@ self: { homepage = "http://lpuppet.banquise.net/"; description = "Tools to parse and evaluate the Puppet DSL"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; + hydraPlatforms = [ "x86_64-linux" ]; }) {}; "language-python" = callPackage @@ -128151,8 +129132,8 @@ self: { }: mkDerivation { pname = "language-rust"; - version = "0.1.1.26"; - sha256 = "1f363j2kpvww0v7l13lg8a2a0v0h2zw7q3x8fyssvrw3yn5afwyn"; + version = "0.2.0.27"; + sha256 = "04xyw05i5fbk766igpa5kx9wa4801s84wr6nyl4y9dwy8fcnq9va"; libraryHaskellDepends = [ array base bytestring deepseq prettyprinter template-haskell transformers utf8-string @@ -128686,6 +129667,7 @@ self: { homepage = "https://github.com/luna/layered-state"; description = "Control structure similar to Control.Monad.State, allowing multiple nested states, distinguishable by provided phantom types."; license = stdenv.lib.licenses.asl20; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "layers" = callPackage @@ -128773,6 +129755,7 @@ self: { homepage = "https://github.com/luna/layouting"; description = "General layouting library. Currently supports layouting 2D areas and can be used as a backend for text pretty printing or automatic windows layouting managers."; license = stdenv.lib.licenses.asl20; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "lazy-csv" = callPackage @@ -129753,8 +130736,8 @@ self: { }: mkDerivation { pname = "lens-toml-parser"; - version = "0.1.0.1"; - sha256 = "1mcbba5ff2jfr91jlzi5s5jf09p92jbpg37gf525bhv23hhid7xy"; + version = "0.1.0.2"; + sha256 = "1akp8mm62pnz8ncg235rdxzcrxv36paw723m7dcyr3139qflzxkn"; libraryHaskellDepends = [ base profunctors text time toml-parser ]; testHaskellDepends = [ base containers dwergaz hlint lens-family text toml-parser @@ -129780,14 +130763,15 @@ self: { "lens-utils" = callPackage ({ mkDerivation, aeson, base, containers, data-default, lens - , monoid, template-haskell + , monoid, split, template-haskell }: mkDerivation { pname = "lens-utils"; - version = "1.4.2"; - sha256 = "1sgsahb2cgfhbv3vw0h1cqls5g5kgbq9crx4w0rfjxcwk9d5jzds"; + version = "1.4.4"; + sha256 = "0ry04ghvbyxa236s150hfs5fa0fsip312ivflg70j49n02ypxr91"; libraryHaskellDepends = [ - aeson base containers data-default lens monoid template-haskell + aeson base containers data-default lens monoid split + template-haskell ]; homepage = "https://github.com/luna/lens-utils"; description = "Collection of missing lens utilities"; @@ -130822,6 +131806,7 @@ self: { homepage = "http://redmine.iportnov.ru/projects/libvirt-hs"; description = "FFI bindings to libvirt virtualization API (http://libvirt.org)"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {inherit (pkgs) libvirt;}; "libvorbis" = callPackage @@ -133281,20 +134266,18 @@ self: { }) {}; "load-font" = callPackage - ({ mkDerivation, base, c2hs, fltkhs, text }: + ({ mkDerivation, base, c2hs, Cabal }: mkDerivation { pname = "load-font"; - version = "0.1.0.0"; - sha256 = "1xva9cxwscjyqpx5yvbicyizk4y439wdv8gzxir2jwkangpvrby5"; - revision = "2"; - editedCabalFile = "0qmz9kmb1cc3cvidxvspa186nkby4m060f6y9v23s3dqp3wd93mm"; + version = "0.1.0.2"; + sha256 = "06vzgyi8r1fhlc1ykdfynll7y4a0wwvjq9x0xg08csr4ypfgj6m3"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; + setupHaskellDepends = [ base Cabal ]; libraryHaskellDepends = [ base ]; libraryToolDepends = [ c2hs ]; - executableHaskellDepends = [ base fltkhs text ]; - homepage = "https://github.com/deech/load-font#load-font"; + homepage = "https://github.com/deech/load-font#readme"; description = "A cross platform library for loading bundled fonts into your application"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; @@ -133472,48 +134455,31 @@ self: { ({ mkDerivation, base, pretty, template-haskell }: mkDerivation { pname = "loch-th"; - version = "0.2.1"; - sha256 = "1kfrjsgzq6wl749n2wm1fhwwigjxcd9lww7whiwjrbmhiz5ism3p"; - libraryHaskellDepends = [ base pretty template-haskell ]; - homepage = "https://github.com/liskin/loch-th"; - description = "Support for precise error locations in source files (Template Haskell version)"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "loch-th_0_2_2" = callPackage - ({ mkDerivation, base, pretty, template-haskell }: - mkDerivation { - pname = "loch-th"; version = "0.2.2"; sha256 = "1hvdkcyrlnv65q8x8h0441x30wr9bbfbg3961xd3fy9an5r961fc"; libraryHaskellDepends = [ base pretty template-haskell ]; homepage = "https://github.com/liskin/loch-th"; description = "Support for precise error locations in source files (Template Haskell version)"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "lock-file" = callPackage ({ mkDerivation, base, data-default-class, directory, exceptions - , filepath, HUnit, tagged-exception-core, test-framework - , test-framework-hunit, test-framework-quickcheck2, transformers + , filepath, HUnit, test-framework, test-framework-hunit + , test-framework-quickcheck2 }: mkDerivation { pname = "lock-file"; - version = "0.5.0.2"; - sha256 = "1l4slkykw59p20kw9iqaa4pjczqx701a9z14nvbzwrmgs2acnki7"; - revision = "4"; - editedCabalFile = "0fs4mrhzj90pnc64nvm6k5v095998rxqcq3875aypkgjn2fwfsrc"; + version = "0.7.0.0"; + sha256 = "1vpaw3hh1as00p9vbj90cyd8nhjimgyp9hn8axgiwc1l47ddp6vc"; libraryHaskellDepends = [ - base data-default-class directory exceptions tagged-exception-core - transformers + base data-default-class directory exceptions ]; testHaskellDepends = [ base data-default-class directory exceptions filepath HUnit - tagged-exception-core test-framework test-framework-hunit - test-framework-quickcheck2 transformers + test-framework test-framework-hunit test-framework-quickcheck2 ]; - homepage = "https://github.com/trskop/lock-file"; + homepage = "https://github.com/trskop/lock-file#readme"; description = "Provide exclusive access to a resource using lock file"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; @@ -135604,8 +136570,8 @@ self: { }: mkDerivation { pname = "machinecell"; - version = "4.0.0"; - sha256 = "1wwrgd1ag104kdx97vii3rh9lj9lg1vg04rr98ldi2ikb90jbgwb"; + version = "4.0.1"; + sha256 = "1j2gzs7icvffga3b71dmik5ryb2mivmx5dvzii453nivgcxwyw22"; libraryHaskellDepends = [ base free mtl profunctors semigroups transformers ]; @@ -135846,8 +136812,8 @@ self: { }: mkDerivation { pname = "madlang"; - version = "4.0.2.6"; - sha256 = "079100sdqh4g7mlbf7p1j04r7g6c6b3q58nm4qiy8yrdvbzjdrhv"; + version = "4.0.2.7"; + sha256 = "08zi6v7p5wy8764505n7wk69iliab1hy40agz9qvgsq9iqi20h3f"; isLibrary = true; isExecutable = true; setupHaskellDepends = [ base Cabal cli-setup ]; @@ -136138,6 +137104,7 @@ self: { homepage = "https://gitlab.com/igrep/main-tester#readme"; description = "Capture stdout/stderr/exit code, and replace stdin of your main function"; license = stdenv.lib.licenses.asl20; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "mainland-pretty" = callPackage @@ -136960,17 +137927,18 @@ self: { }) {}; "marihana" = callPackage - ({ mkDerivation, base, directory }: + ({ mkDerivation, base, directory, filepath, process }: mkDerivation { pname = "marihana"; - version = "0.1.1.0"; - sha256 = "1wcrmjxw39pcarvwn4cfzd4wimvsf57qg8vl5lykcd9s4p2dnyvw"; + version = "0.2.1.0"; + sha256 = "03aw0chicgmyj3ix7nz0dc5mpck0409bv1d7lfs5wn9z4mmynqiv"; isLibrary = true; isExecutable = true; - libraryHaskellDepends = [ base directory ]; - executableHaskellDepends = [ base directory ]; - testHaskellDepends = [ base directory ]; + libraryHaskellDepends = [ base directory filepath process ]; + executableHaskellDepends = [ base directory filepath process ]; + testHaskellDepends = [ base directory filepath process ]; homepage = "https://github.com/suzukeno/marihana#readme"; + description = "Minimal tool to make your blog in Haskell"; license = stdenv.lib.licenses.mit; }) {}; @@ -137163,6 +138131,26 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "markup_4_2_0" = callPackage + ({ mkDerivation, attoparsec-uri, base, blaze-html, blaze-markup + , clay, comonad, lucid, mmorph, monad-control, monad-logger, mtl + , path, path-extra, resourcet, text, transformers-base, urlpath + }: + mkDerivation { + pname = "markup"; + version = "4.2.0"; + sha256 = "065pq5m12hk9k6c8lzrgr5mzgz2rzpafhlaql6bvv422j3pbkfgs"; + libraryHaskellDepends = [ + attoparsec-uri base blaze-html blaze-markup clay comonad lucid + mmorph monad-control monad-logger mtl path path-extra resourcet + text transformers-base urlpath + ]; + homepage = "https://github.com/athanclark/markup#readme"; + description = "Abstraction for HTML-embedded content"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "markup-preview" = callPackage ({ mkDerivation, base, cmdargs, directory, glib, gtk , gtk2hs-buildtools, MissingH, mtl, pandoc, temporary, text @@ -137371,27 +138359,8 @@ self: { }: mkDerivation { pname = "massiv"; - version = "0.1.4.0"; - sha256 = "0hp0dvc9qr0px3x2w28wvks3918jc5z1ib2c0n2bfz0isi11gs1s"; - libraryHaskellDepends = [ - base data-default-class deepseq ghc-prim primitive vector - ]; - testHaskellDepends = [ - base data-default deepseq hspec QuickCheck safe-exceptions vector - ]; - homepage = "https://github.com/lehins/massiv"; - description = "Massiv (Массив) is an Array Library"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "massiv_0_1_5_0" = callPackage - ({ mkDerivation, base, data-default, data-default-class, deepseq - , ghc-prim, hspec, primitive, QuickCheck, safe-exceptions, vector - }: - mkDerivation { - pname = "massiv"; - version = "0.1.5.0"; - sha256 = "1azd011abvlkr27rssl6cra8an142z6jrfwj6yaas1favbs6r570"; + version = "0.1.6.1"; + sha256 = "1ifkzalbhp3jv41x9zwsn0ks3ahrab6gs1x57c4y0ww56qf0gv2y"; libraryHaskellDepends = [ base data-default-class deepseq ghc-prim primitive vector ]; @@ -137401,7 +138370,6 @@ self: { homepage = "https://github.com/lehins/massiv"; description = "Massiv (Массив) is an Array Library"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "massiv-io" = callPackage @@ -137410,27 +138378,8 @@ self: { }: mkDerivation { pname = "massiv-io"; - version = "0.1.1.0"; - sha256 = "05sj1w06crdncibsknyrhbjwaldsixfw6qncld736ryr1sjcqv6j"; - revision = "1"; - editedCabalFile = "1nsi12h9jcmypim3vd9x1a5czx9cqcnpf12lbi7d1ipmnqclrj3r"; - libraryHaskellDepends = [ - base bytestring data-default deepseq directory filepath JuicyPixels - massiv netpbm process vector - ]; - homepage = "https://github.com/lehins/massiv"; - description = "Import/export of Image files into massiv Arrays"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "massiv-io_0_1_2_0" = callPackage - ({ mkDerivation, base, bytestring, data-default, deepseq, directory - , filepath, JuicyPixels, massiv, netpbm, process, vector - }: - mkDerivation { - pname = "massiv-io"; - version = "0.1.2.0"; - sha256 = "02va411j1alsja009xms30x0zhwansjiy81djz2za06ghyg4f6a1"; + version = "0.1.3.0"; + sha256 = "08jngww0ki28d2mhfj9vw4rlxigzzvgb295k5fnj0cr7xmhr48zx"; libraryHaskellDepends = [ base bytestring data-default deepseq directory filepath JuicyPixels massiv netpbm process vector @@ -137438,7 +138387,6 @@ self: { homepage = "https://github.com/lehins/massiv"; description = "Import/export of Image files into massiv Arrays"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "master-plan" = callPackage @@ -139486,6 +140434,21 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "micro-recursion-schemes" = callPackage + ({ mkDerivation, base, cpphs, HUnit, template-haskell + , th-abstraction + }: + mkDerivation { + pname = "micro-recursion-schemes"; + version = "5.0.2.1"; + sha256 = "1n1sza3a87vh74hx1da4mcfwarbjkz2cfvnkldnqwfnqvngq1gaq"; + libraryHaskellDepends = [ base template-haskell th-abstraction ]; + libraryToolDepends = [ cpphs ]; + testHaskellDepends = [ base HUnit template-haskell ]; + description = "Simple recursion schemes"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "microbench" = callPackage ({ mkDerivation, base, time }: mkDerivation { @@ -140259,18 +141222,18 @@ self: { "mime-mail-ses" = callPackage ({ mkDerivation, base, base64-bytestring, byteable, bytestring - , conduit, cryptohash, http-client, http-conduit, http-types - , mime-mail, old-locale, text, time, transformers, xml-conduit - , xml-types + , conduit, cryptohash, http-client, http-client-tls, http-conduit + , http-types, mime-mail, old-locale, text, time, transformers + , xml-conduit, xml-types }: mkDerivation { pname = "mime-mail-ses"; - version = "0.4.0.0"; - sha256 = "0w87ba8a5kli7xv7d8x5viz1c2rmm3ahaxp5d797n8bb13yn09mw"; + version = "0.4.1"; + sha256 = "1w6k4cm5yab9dhg7yn6mp7jzk1zdwpnzc6c1xb3vz3rdwp8jjvx7"; libraryHaskellDepends = [ base base64-bytestring byteable bytestring conduit cryptohash - http-client http-conduit http-types mime-mail old-locale text time - transformers xml-conduit xml-types + http-client http-client-tls http-conduit http-types mime-mail + old-locale text time transformers xml-conduit xml-types ]; homepage = "http://github.com/snoyberg/mime-mail"; description = "Send mime-mail messages via Amazon SES"; @@ -140456,35 +141419,32 @@ self: { }) {}; "minio-hs" = callPackage - ({ mkDerivation, aeson, async, base, base64-bytestring, bytestring - , case-insensitive, conduit, conduit-combinators, conduit-extra - , containers, cryptonite, cryptonite-conduit, data-default - , directory, exceptions, filepath, http-client, http-conduit - , http-types, lifted-async, lifted-base, memory, monad-control - , protolude, QuickCheck, resourcet, tasty, tasty-hunit - , tasty-quickcheck, tasty-smallcheck, temporary, text, text-format - , time, transformers, transformers-base, vector, xml-conduit + ({ mkDerivation, aeson, base, base64-bytestring, bytestring + , case-insensitive, conduit, conduit-extra, containers, cryptonite + , cryptonite-conduit, data-default, directory, exceptions, filepath + , http-client, http-conduit, http-types, memory, protolude + , QuickCheck, resourcet, tasty, tasty-hunit, tasty-quickcheck + , tasty-smallcheck, temporary, text, text-format, time + , transformers, unliftio, unliftio-core, xml-conduit }: mkDerivation { pname = "minio-hs"; - version = "0.3.2"; - sha256 = "0yfhnvngw27h05hxywxp76fcy4566djsm0l3x2kx8n4ppwi5p6r4"; + version = "1.0.0"; + sha256 = "0q6qzzkkbm9b0a7c630yj2rlg54imir1yjbpsy4x9fh3kc7vx0i2"; libraryHaskellDepends = [ - aeson async base base64-bytestring bytestring case-insensitive - conduit conduit-combinators conduit-extra containers cryptonite - cryptonite-conduit data-default exceptions filepath http-client - http-conduit http-types lifted-async lifted-base memory - monad-control protolude resourcet text text-format time - transformers transformers-base vector xml-conduit + aeson base base64-bytestring bytestring case-insensitive conduit + conduit-extra containers cryptonite cryptonite-conduit data-default + exceptions filepath http-client http-conduit http-types memory + protolude resourcet text text-format time transformers unliftio + unliftio-core xml-conduit ]; testHaskellDepends = [ - aeson async base base64-bytestring bytestring case-insensitive - conduit conduit-combinators conduit-extra containers cryptonite - cryptonite-conduit data-default directory exceptions filepath - http-client http-conduit http-types lifted-async lifted-base memory - monad-control protolude QuickCheck resourcet tasty tasty-hunit + aeson base base64-bytestring bytestring case-insensitive conduit + conduit-extra containers cryptonite cryptonite-conduit data-default + directory exceptions filepath http-client http-conduit http-types + memory protolude QuickCheck resourcet tasty tasty-hunit tasty-quickcheck tasty-smallcheck temporary text text-format time - transformers transformers-base vector xml-conduit + transformers unliftio unliftio-core xml-conduit ]; homepage = "https://github.com/minio/minio-hs#readme"; description = "A Minio Haskell Library for Amazon S3 compatible cloud storage"; @@ -140615,8 +141575,8 @@ self: { }: mkDerivation { pname = "miniutter"; - version = "0.4.6.0"; - sha256 = "093ahw66byzgc9scvmlihl3sa2zph9mszpf9kdjd9ydi5gv6mrmx"; + version = "0.4.7.0"; + sha256 = "10nwg3vw0p8hb8hgc34xspg4vrwf8xyhi22b9j57ms3045marjdd"; libraryHaskellDepends = [ base binary containers ghc-prim minimorph text ]; @@ -140751,15 +141711,15 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "miso_0_18_0_0" = callPackage + "miso_0_20_0_0" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, http-api-data , http-types, lucid, network-uri, servant, servant-lucid, text , transformers, vector }: mkDerivation { pname = "miso"; - version = "0.18.0.0"; - sha256 = "17znwg6spm950qnjrw2v72lff5xng4c1rpcq3140qkmcq99v1zvi"; + version = "0.20.0.0"; + sha256 = "0nr7j9065mrwmmqwjsgl9krh21mhxjddbwmkwja0b207aglc072j"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -140982,6 +141942,8 @@ self: { pname = "mmark"; version = "0.0.5.6"; sha256 = "0d0jxxj0b1jy9mym6389dmm6biiw8kzdh06zj2j0gsjczn2n60zw"; + revision = "1"; + editedCabalFile = "02b0ycywjhzx1ll36l38mwp2gy677hgsqpq2mwyi277ykbrwnsdk"; enableSeparateDataOutput = true; libraryHaskellDepends = [ aeson base case-insensitive containers data-default-class deepseq @@ -141030,8 +141992,8 @@ self: { pname = "mmark-ext"; version = "0.2.0.0"; sha256 = "1ccfdjsn8z80x2m5p9q17r2hf14zj63nkxkrg9s7knwr1j08gj1k"; - revision = "1"; - editedCabalFile = "0sql0z4123v5kzqcganfaag6ijl3j7lw52d3c50r9qwwg8q2dydz"; + revision = "2"; + editedCabalFile = "0h47hy97mdan3cnxppf0yarmis81irc0c92nm1xv9f6w35li7rkq"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base foldl lucid microlens mmark modern-uri skylighting text @@ -141280,8 +142242,8 @@ self: { ({ mkDerivation, base, doctest, Glob }: mkDerivation { pname = "modular-arithmetic"; - version = "1.2.1.2"; - sha256 = "0xm1p63r4a8gdpsrdrsf80bihra11blnik2gwvlpph494pvk27wj"; + version = "1.2.1.3"; + sha256 = "1f5k25gqnn037fpan3l956ly0g5cgwnw7qxyc6sm6hgdcl91wn1l"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base doctest Glob ]; homepage = "https://github.com/TikhonJelvis/modular-arithmetic"; @@ -141518,6 +142480,7 @@ self: { homepage = "https://github.com/mvv/monad-abort-fd"; description = "A better error monad transformer"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "monad-atom" = callPackage @@ -141766,6 +142729,7 @@ self: { homepage = "https://github.com/mvv/monad-finally"; description = "Guard monadic computations with cleanup actions"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "monad-fork" = callPackage @@ -141942,15 +142906,15 @@ self: { }: mkDerivation { pname = "monad-logger"; - version = "0.3.28.3"; - sha256 = "11v5014zqp1sl801wc39yyix8m30vrf3ibas28bcdjyfrbhhvskp"; + version = "0.3.28.5"; + sha256 = "1w9700v2vbrydpwr5jjivnkrqcrbl7xbklym0w15qdqd5p6xfpi2"; libraryHaskellDepends = [ base bytestring conduit conduit-extra exceptions fast-logger lifted-base monad-control monad-loops mtl resourcet stm stm-chans template-haskell text transformers transformers-base transformers-compat unliftio-core ]; - homepage = "https://github.com/kazu-yamamoto/logger"; + homepage = "https://github.com/snoyberg/monad-logger#readme"; description = "A class of monads which can log messages"; license = stdenv.lib.licenses.mit; }) {}; @@ -142675,8 +143639,8 @@ self: { }: mkDerivation { pname = "monadcryptorandom"; - version = "0.7.2"; - sha256 = "12inwjh1smgrp62hvrca7608vjaff576503xi7ymbkq9szk8rkj9"; + version = "0.7.2.1"; + sha256 = "03bn19wkshs9bjfl65p8klagydva6c543zasibv3y0w1hrpknib9"; libraryHaskellDepends = [ base bytestring crypto-api exceptions mtl tagged transformers transformers-compat @@ -143159,28 +144123,12 @@ self: { }: mkDerivation { pname = "monoid-extras"; - version = "0.4.3"; - sha256 = "1c2zdsyq0iyagzp9y64j75nxvpbjr5y3fdg8cd1pkfqgms977qsr"; - revision = "1"; - editedCabalFile = "08961ibwiqks8qw5cwpkzpz3acrlrd48l2sl1qny96gycaslzrps"; - libraryHaskellDepends = [ base groups semigroupoids semigroups ]; - benchmarkHaskellDepends = [ base criterion ]; - description = "Various extra monoid-related definitions and utilities"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "monoid-extras_0_4_4" = callPackage - ({ mkDerivation, base, criterion, groups, semigroupoids, semigroups - }: - mkDerivation { - pname = "monoid-extras"; version = "0.4.4"; sha256 = "1ik88ilg5zjrajqllg3zjp92bz8mhvrc8q9mx6llkwry5k3avsfx"; libraryHaskellDepends = [ base groups semigroupoids semigroups ]; benchmarkHaskellDepends = [ base criterion ]; description = "Various extra monoid-related definitions and utilities"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "monoid-owns" = callPackage @@ -143718,28 +144666,28 @@ self: { }) {}; "mp" = callPackage - ({ mkDerivation, base, binary, bytestring, ConfigFile, daemons - , directory, filepath, glib, gstreamer, hgettext, MissingH, mtl - , network, random, setlocale, text, unix, unordered-containers - , utf8-string, vty, vty-ui + ({ mkDerivation, async, base, binary, ConfigFile, containers + , daemons, directory, exceptions, filepath, gi-glib, gi-gobject + , gi-gst, haskell-gi-base, haskell-gi-overloading, lens, MissingH + , mtl, network, random, resourcet, simple-ui, template-haskell + , text, utf8-string, vty }: mkDerivation { pname = "mp"; - version = "0.2.2"; - sha256 = "1klz2ykglgkvxs66j5iacjbx5cv5gq0y4d12g68ng2pcmpwc93ir"; - revision = "1"; - editedCabalFile = "1cc85zdja69m16h32ii1jw1qkfz7jq3gp0m0m6pfaj146l8qcmwc"; + version = "1.0.2"; + sha256 = "07npcr1rjypjbxrv3hccqfac3piq00psc7yxgh7iw8pl8izqrwl7"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; executableHaskellDepends = [ - base binary bytestring ConfigFile daemons directory filepath glib - gstreamer hgettext MissingH mtl network random setlocale text unix - unordered-containers utf8-string vty vty-ui + async base binary ConfigFile containers daemons directory + exceptions filepath gi-glib gi-gobject gi-gst haskell-gi-base + haskell-gi-overloading lens MissingH mtl network random resourcet + simple-ui template-haskell text utf8-string vty ]; - homepage = "https://bitbucket.org/borekpiotr/linux-music-player"; + homepage = "http://bitbucket.org/borekpiotr/linux-music-player"; description = "Music player for linux"; - license = "GPL"; + license = stdenv.lib.licenses.gpl2; hydraPlatforms = stdenv.lib.platforms.none; }) {}; @@ -144866,6 +145814,28 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "multistate_0_8_0_0" = callPackage + ({ mkDerivation, base, hspec, monad-control, mtl, tagged + , transformers, transformers-base + }: + mkDerivation { + pname = "multistate"; + version = "0.8.0.0"; + sha256 = "0sax983yjzcbailza3fpjjszg4vn0wb11wjr11jskk22lccbagq1"; + revision = "1"; + editedCabalFile = "1p5xf8i7y56fb4m7is0x1z852cq82sv0342z1h4qz1mi8vpln7zz"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base monad-control mtl tagged transformers transformers-base + ]; + testHaskellDepends = [ base hspec transformers ]; + homepage = "https://github.com/lspitzner/multistate"; + description = "like mtl's ReaderT / WriterT / StateT, but more than one contained value/type"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "multivariant" = callPackage ({ mkDerivation, base, containers, free, HUnit, invertible , MonadRandom, profunctors, QuickCheck, semigroupoids, tasty @@ -145538,6 +146508,26 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "mwc-probability-transition" = callPackage + ({ mkDerivation, base, ghc-prim, hspec, logging-effect, mtl + , mwc-probability, primitive, QuickCheck, transformers + }: + mkDerivation { + pname = "mwc-probability-transition"; + version = "0.3.0.3"; + sha256 = "04jnszan9723ycrf1xgh2k87vcx0xyq5ga8q3fjskr3937j0ydxj"; + libraryHaskellDepends = [ + base ghc-prim logging-effect mtl mwc-probability primitive + transformers + ]; + testHaskellDepends = [ + base hspec logging-effect mwc-probability QuickCheck + ]; + homepage = "https://github.com/ocramz/mwc-probability-transition"; + description = "A Markov stochastic transition operator with logging"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "mwc-random" = callPackage ({ mkDerivation, base, math-functions, primitive, time, vector }: mkDerivation { @@ -147601,23 +148591,6 @@ self: { }) {}; "netwire-input-glfw" = callPackage - ({ mkDerivation, base, containers, GLFW-b, mtl, netwire-input, stm - }: - mkDerivation { - pname = "netwire-input-glfw"; - version = "0.0.8"; - sha256 = "1nf0ikx6cfsm9xh4zmz64iwq4w92g0g3zalsk3zzd0a7pq74cdz9"; - isLibrary = true; - isExecutable = true; - libraryHaskellDepends = [ - base containers GLFW-b mtl netwire-input stm - ]; - homepage = "https://www.github.com/Mokosha/netwire-input-glfw"; - description = "GLFW instance of netwire-input"; - license = stdenv.lib.licenses.mit; - }) {}; - - "netwire-input-glfw_0_0_10" = callPackage ({ mkDerivation, base, containers, deepseq, GLFW-b, mtl , netwire-input, stm }: @@ -147633,7 +148606,6 @@ self: { homepage = "https://www.github.com/Mokosha/netwire-input-glfw"; description = "GLFW instance of netwire-input"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "netwire-input-javascript" = callPackage @@ -148974,8 +149946,8 @@ self: { }: mkDerivation { pname = "ngx-export"; - version = "1.4.0"; - sha256 = "16gs4wmv8qd8zlm2clsd2h4gcj8fsad6s926nspnbyznbmsbg6p2"; + version = "1.4.1"; + sha256 = "1a9swysq72igyfbqw078fj3j8vw6hw1v5h4f64kh9wvvdcrdl2rh"; libraryHaskellDepends = [ async base binary bytestring deepseq monad-loops template-haskell unix @@ -150334,17 +151306,18 @@ self: { }) {}; "number-length" = callPackage - ({ mkDerivation, base, criterion, HUnit, QuickCheck, test-framework - , test-framework-hunit, test-framework-quickcheck2 + ({ mkDerivation, base, criterion, HUnit, QuickCheck + , quickcheck-instances, test-framework, test-framework-hunit + , test-framework-quickcheck2 }: mkDerivation { pname = "number-length"; - version = "0.2.0.0"; - sha256 = "1jrlq7qdi7lcpkqqv9qafcgci2gc8rb3f3lv177s8narfdprx2hz"; + version = "0.2.1.0"; + sha256 = "1cdlwdas09q39jag5jl398wmw7ifbgdpp6p5kh0fi71m1c4f05w9"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ - base HUnit QuickCheck test-framework test-framework-hunit - test-framework-quickcheck2 + base HUnit QuickCheck quickcheck-instances test-framework + test-framework-hunit test-framework-quickcheck2 ]; benchmarkHaskellDepends = [ base criterion ]; homepage = "https://github.com/trskop/number-length"; @@ -150686,6 +151659,7 @@ self: { homepage = "https://github.com/tonyday567/numhask#readme"; description = "A numeric prelude"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "numhask-range" = callPackage @@ -151889,12 +152863,12 @@ self: { }) {}; "one-liner-instances" = callPackage - ({ mkDerivation, base, one-liner }: + ({ mkDerivation, base, one-liner, random }: mkDerivation { pname = "one-liner-instances"; - version = "0.1.1.0"; - sha256 = "0yb5rdy735lalwrxvmvvjnpyikdqs2y2fjldjcbjj0r3d912azxn"; - libraryHaskellDepends = [ base one-liner ]; + version = "0.1.2.1"; + sha256 = "1gy900nd5n6cffqw63hlkqg4ly86wjlfqgdcm1zy2nyx7dxg914k"; + libraryHaskellDepends = [ base one-liner random ]; homepage = "https://github.com/mstksg/one-liner-instances#readme"; description = "Generics-based implementations for common typeclasses"; license = stdenv.lib.licenses.bsd3; @@ -152237,8 +153211,8 @@ self: { ({ mkDerivation, base, type-fun }: mkDerivation { pname = "open-union"; - version = "0.3.0.0"; - sha256 = "01wxkla0034d5i331vzbjm5ilkdn2570qhl0pa6lf3m58aghmccn"; + version = "0.4.0.0"; + sha256 = "0mf37xya4bb8za8jrhnzr9pddsd93dw0vycmjlks5w50x10d4a55"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base type-fun ]; @@ -154443,8 +155417,8 @@ self: { libraryToolDepends = [ c2hs ]; description = "Haskell binding for C PAM API"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = [ "i686-linux" "x86_64-linux" ]; - }) {inherit (pkgs) pam;}; + hydraPlatforms = stdenv.lib.platforms.none; + }) {pam = null;}; "panda" = callPackage ({ mkDerivation, base, cgi, containers, data-default, directory @@ -154793,10 +155767,8 @@ self: { ({ mkDerivation, base, containers, lens, pandoc-types }: mkDerivation { pname = "pandoc-lens"; - version = "0.6.2"; - sha256 = "18v22salncjdghpg6gz78mpf9wp5qk622jia77qwlh9di36jdqg5"; - revision = "1"; - editedCabalFile = "1b3qk1afdd9l6i625spm26cgzmmd3bqmyp0lfszjnaf32ac7sldd"; + version = "0.6.3"; + sha256 = "1gv9n753qp8l7fivi96sgb8qsia5bijw2fla21dxyn81qza3fk6v"; libraryHaskellDepends = [ base containers lens pandoc-types ]; homepage = "http://github.com/bgamari/pandoc-lens"; description = "Lenses for Pandoc documents"; @@ -154991,8 +155963,8 @@ self: { }: mkDerivation { pname = "pango"; - version = "0.13.4.0"; - sha256 = "1m7as420nh55n0hywnl6rbm7zj4s1ry38xvb1gk3np7k87lwf20z"; + version = "0.13.5.0"; + sha256 = "1s29dmds28ffbcbic8pw3bsixkb6lzjm78j8qv4x3r9l64kvjndz"; enableSeparateDataOutput = true; setupHaskellDepends = [ base Cabal filepath gtk2hs-buildtools ]; libraryHaskellDepends = [ @@ -156692,15 +157664,21 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "path-extra_0_1_1" = callPackage - ({ mkDerivation, base, path }: + "path-extra_0_2_0" = callPackage + ({ mkDerivation, attoparsec, base, path, QuickCheck + , quickcheck-instances, tasty, tasty-quickcheck, text + }: mkDerivation { pname = "path-extra"; - version = "0.1.1"; - sha256 = "0dyhazqz8gz6fk79v76j9kw7bj001njdvc0b3wpl6an3dqw8hy9j"; - libraryHaskellDepends = [ base path ]; + version = "0.2.0"; + sha256 = "0fh4m3vidf75j43rk1n46y3bsn0j4247bz71s35651vi9s8vw27b"; + libraryHaskellDepends = [ attoparsec base path text ]; + testHaskellDepends = [ + attoparsec base path QuickCheck quickcheck-instances tasty + tasty-quickcheck text + ]; homepage = "https://github.com/athanclark/path-extra#readme"; - description = "Some extensions to Chris Done's path library, for use with urlpath and attoparsec-uri"; + description = "URLs without host information"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; }) {}; @@ -156713,8 +157691,8 @@ self: { pname = "path-io"; version = "1.3.3"; sha256 = "1g9m3qliqjk1img894wsb89diym5zrq51qkkrwhz4sbm9a8hbv1a"; - revision = "2"; - editedCabalFile = "1zipck6lhhff9v86s4awgl6z35znjd7wcy1x25xplsdrxpzps3nl"; + revision = "3"; + editedCabalFile = "1h9hsibbflkxpjl2fqamqiv3x3gasf51apnmklrs9l9x8r32hzcc"; libraryHaskellDepends = [ base containers directory dlist exceptions filepath path temporary time transformers unix-compat @@ -156792,14 +157770,15 @@ self: { "paths" = callPackage ({ mkDerivation, base, bytestring, deepseq, directory, filepath - , time + , template-haskell, text, time }: mkDerivation { pname = "paths"; - version = "0.1"; - sha256 = "0cccvc2p04rmhbg61jaa592jd86dp08ipamk3ddvswr5ih3rhdgx"; + version = "0.2.0.0"; + sha256 = "18pzjlnmx7w79riig7qzyhw13jla92lals9lwayl23qr02ndna4v"; libraryHaskellDepends = [ - base bytestring deepseq directory filepath time + base bytestring deepseq directory filepath template-haskell text + time ]; description = "Library for representing and manipulating type-safe file paths"; license = stdenv.lib.licenses.bsd3; @@ -158146,8 +159125,8 @@ self: { }: mkDerivation { pname = "persistent"; - version = "2.8.1"; - sha256 = "1mfk6mxicg12vnvc9049k55dgvcx4ss4z2219qr8wy89m2z72l1k"; + version = "2.8.2"; + sha256 = "1h0yijbf1yiwl50klyafy4ln99j8bib4kgbzviw7fc4y4mwv4sv9"; libraryHaskellDepends = [ aeson attoparsec base base64-bytestring blaze-html blaze-markup bytestring conduit containers fast-logger haskell-src-meta @@ -159587,6 +160566,7 @@ self: { ]; description = "dice game"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "piki" = callPackage @@ -160225,8 +161205,8 @@ self: { }: mkDerivation { pname = "pipes-extras"; - version = "1.0.13"; - sha256 = "04adszpz02a72zz8kjj9lcw62n296p74rq4xds3b8g345m6c51g1"; + version = "1.0.14"; + sha256 = "17f8aj6p074yryk0a26vg1iiy7dva5cjb1gzsrvsq41dhy28j7gx"; libraryHaskellDepends = [ base foldl lens pipes transformers ]; testHaskellDepends = [ base HUnit pipes test-framework test-framework-hunit transformers @@ -161244,6 +162224,7 @@ self: { homepage = "https://github.com/phlummox/hs-plex#readme"; description = "run a subprocess, combining stdout and stderr"; license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "plist" = callPackage @@ -161618,8 +162599,8 @@ self: { ({ mkDerivation, base, bytestring, containers, hspec }: mkDerivation { pname = "plural"; - version = "0.0.1"; - sha256 = "15hbvr565qvm608241xnx8sicspl2200jqbxd138a14qfi5aplc0"; + version = "0.0.2"; + sha256 = "1f35w7rzwq6f1zzdpglij41ra8pwyzjklv2pbnpmbp9q6rpi836p"; libraryHaskellDepends = [ base bytestring containers ]; testHaskellDepends = [ base hspec ]; description = "Pluralize"; @@ -161847,8 +162828,8 @@ self: { }: mkDerivation { pname = "pointfree-fancy"; - version = "1.1.1.5"; - sha256 = "0wrsk5l83dzq0pv0dy24gil0mipw1yalalivjq92qx0dv68z15ja"; + version = "1.1.1.7"; + sha256 = "1xw2p96ghclfxmc12kwxyh25r5k9k6h3zriaf38wz5d3j36npa7w"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -162312,30 +163293,6 @@ self: { }: mkDerivation { pname = "pomaps"; - version = "0.0.0.3"; - sha256 = "1gxfaqcg6d9wkm67d8rrjvigy9kvvh9403v3jk790x9pfydcjvym"; - libraryHaskellDepends = [ - base containers deepseq ghc-prim lattices - ]; - testHaskellDepends = [ - base ChasingBottoms containers doctest Glob lattices tasty - tasty-hspec tasty-quickcheck - ]; - benchmarkHaskellDepends = [ - base criterion deepseq lattices random vector - ]; - homepage = "https://github.com/sgraf812/pomaps#readme"; - description = "Maps and sets of partial orders"; - license = stdenv.lib.licenses.mit; - }) {}; - - "pomaps_0_0_0_4" = callPackage - ({ mkDerivation, base, ChasingBottoms, containers, criterion - , deepseq, doctest, ghc-prim, Glob, lattices, random, tasty - , tasty-hspec, tasty-quickcheck, vector - }: - mkDerivation { - pname = "pomaps"; version = "0.0.0.4"; sha256 = "0mjfzj2j8b6337ivvnry7ylrw5g1ajxpqqzar1wmscm73ybr0xbn"; libraryHaskellDepends = [ @@ -162351,7 +163308,6 @@ self: { homepage = "https://github.com/sgraf812/pomaps#readme"; description = "Maps and sets of partial orders"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "pomodoro" = callPackage @@ -163081,8 +164037,8 @@ self: { }: mkDerivation { pname = "postgresql-connector"; - version = "0.2.4"; - sha256 = "0ly6p75c7vsrwlc7zsb91k19ffz0va6xc38djyc184qlji52hr1w"; + version = "0.2.5"; + sha256 = "0ilw7z16jzlys3pv4bvdd5ajprq4dbzgg3ivwpgzxrpnh2mfjkqq"; libraryHaskellDepends = [ base bytestring exceptions lens mtl postgresql-simple resource-pool resourcet time transformers-base @@ -164043,8 +164999,8 @@ self: { }: mkDerivation { pname = "preamble"; - version = "0.0.60"; - sha256 = "1ygpyaniv4f9ahmnrpkirhmfry40afqwaici4ksrnr3pz64fsll5"; + version = "0.0.61"; + sha256 = "16zs8mqmbvzi4pmjqmga3d17mjk6kriclv3qg3rxhs3rd2gyipqa"; libraryHaskellDepends = [ aeson base basic-prelude exceptions fast-logger lens lifted-base monad-control monad-logger MonadRandom mtl network resourcet safe @@ -164597,6 +165553,8 @@ self: { pname = "pretty-compact"; version = "3.0"; sha256 = "06m8n5rx1d62hwd017ss8nlxas5ia57lgxddm2hv2046938a5wm8"; + revision = "2"; + editedCabalFile = "04c309cdfrfwh031g8syyrwwn0lxdjj9f7d8szabscm19zwbi399"; libraryHaskellDepends = [ base base-compat containers ]; benchmarkHaskellDepends = [ aeson base base-compat bytestring criterion deepseq pretty text @@ -165037,6 +165995,18 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "primitive-checked" = callPackage + ({ mkDerivation, base, primitive }: + mkDerivation { + pname = "primitive-checked"; + version = "0.6.3.0"; + sha256 = "02097f658qidmcfaisrcl4k3vmipx8w8p6mcbnajc8ndb3m58bbl"; + libraryHaskellDepends = [ base primitive ]; + homepage = "https://github.com/andrewthad/primitive-checked#readme"; + description = "primitive functions with bounds-checking"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "primitive-simd" = callPackage ({ mkDerivation, base, criterion, deepseq, ghc-prim, primitive , random, vector @@ -165666,9 +166636,10 @@ self: { ({ mkDerivation, base, template-haskell, th-data-compat }: mkDerivation { pname = "product-isomorphic"; - version = "0.0.3.1"; - sha256 = "1vm502d3byxiyd01h3pddar9wvh522awvi3awsb34p8s2w01p70i"; + version = "0.0.3.2"; + sha256 = "1yqpfdbdq0zh69mbpgns8faj0ajc9a8wgp3c8sgn373py2as9jxl"; libraryHaskellDepends = [ base template-haskell th-data-compat ]; + testHaskellDepends = [ base template-haskell ]; homepage = "http://github.com/khibino/haskell-product-isomorphic"; description = "Weaken applicative functor on products"; license = stdenv.lib.licenses.bsd3; @@ -166123,8 +167094,8 @@ self: { }: mkDerivation { pname = "prologue"; - version = "3.1.3"; - sha256 = "1nzm4hgjwpbxmvd1y1x58smxbk5ahfyygi22jwwyzqaknrgs5ara"; + version = "3.2.0"; + sha256 = "19q61qjmygjah49qjy4a89hpn8ra8z9pq0f72p1c7wzgk38zp55r"; libraryHaskellDepends = [ base bifunctors binary comonad cond container convert data-default deepseq deriving-compat either errors exceptions functor-utils @@ -166302,8 +167273,8 @@ self: { }: mkDerivation { pname = "propellor"; - version = "5.3.4"; - sha256 = "0wzaca3hcvbdfb326srj6sivzkbyshxv6j0lvng6k8dqwiipnvwb"; + version = "5.3.5"; + sha256 = "0x6whnn53grfkjqybn91kfsr69w3r9mk9r39yzwx35skwkqj3vb9"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -166311,11 +167282,7 @@ self: { filepath hashable hslogger IfElse mtl network process split stm text time transformers unix unix-compat ]; - executableHaskellDepends = [ - ansi-terminal async base bytestring containers directory exceptions - filepath hashable hslogger IfElse mtl network process split stm - text time transformers unix unix-compat - ]; + executableHaskellDepends = [ base ]; homepage = "https://propellor.branchable.com/"; description = "property-based host configuration management in haskell"; license = stdenv.lib.licenses.bsd2; @@ -170061,8 +171028,8 @@ self: { }: mkDerivation { pname = "rakuten"; - version = "0.1.1.0"; - sha256 = "13m8rg805aw5rj2a5j16yj06k5ws99ssl89r5s62xlq6lbzhc84c"; + version = "0.1.1.1"; + sha256 = "01p6f8vapygcw6viwq7kkg6b5fifqzbkski0763x9by49h5gpbsi"; libraryHaskellDepends = [ aeson base bytestring connection constraints data-default-class extensible http-api-data http-client http-client-tls http-types @@ -171014,8 +171981,8 @@ self: { }: mkDerivation { pname = "rattletrap"; - version = "4.0.7"; - sha256 = "1ry5z8dc8hqq5sqxjz23mssk4symnl98zrm77hnfsfapx7jg8b8x"; + version = "4.0.8"; + sha256 = "05rad5dckya26mai39623n5bvhvk13yjxikrc6r7yc6nvlkkh8zb"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -171330,8 +172297,8 @@ self: { }: mkDerivation { pname = "rdf4h"; - version = "3.0.2"; - sha256 = "0a9klg4a6ilgmv1p3aa55p5pdimgs9xays8msy01gz38441nnpd3"; + version = "3.0.3"; + sha256 = "0lidqww0d8ckm4iipjx4gq32jspxidz0g009m5xrf8x6qsl26sx0"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -171577,6 +172544,18 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "reactive-banana-automation" = callPackage + ({ mkDerivation, base, doctest, reactive-banana, stm, time }: + mkDerivation { + pname = "reactive-banana-automation"; + version = "0.1.1"; + sha256 = "0fn3frv0idgdg9faysri7x5nzrxrzhpy41s5nm6v8ckqcnzq7vvv"; + libraryHaskellDepends = [ base reactive-banana stm time ]; + testHaskellDepends = [ base doctest ]; + description = "home (etc) automation using reactive-banana"; + license = stdenv.lib.licenses.agpl3; + }) {}; + "reactive-banana-bunch" = callPackage ({ mkDerivation, base, non-empty, reactive-banana, transformers , utility-ht @@ -172482,8 +173461,8 @@ self: { ({ mkDerivation, base, deepseq, raptor2, redland }: mkDerivation { pname = "redland"; - version = "0.2.0.1"; - sha256 = "080bp01x6vlfw116zcl75vr7pb753mn8892rkh7aqgaf8ajkhb2c"; + version = "0.2.0.2"; + sha256 = "0wfmv87d9vxah1s519457zs4436lri7ypn2069r8wdpvaariiim5"; libraryHaskellDepends = [ base deepseq ]; libraryPkgconfigDepends = [ raptor2 redland ]; description = "Redland RDF library bindings"; @@ -175085,8 +176064,8 @@ self: { pname = "req-conduit"; version = "1.0.0"; sha256 = "193bv4jp7rrbpb1i9as9s2l978wz5kbz5kvr7ppllif5ppj699qx"; - revision = "2"; - editedCabalFile = "1cbzvqfs8glr004viya4x3p08x8lmkrgwwxjy78s32xkf8b2xxpr"; + revision = "3"; + editedCabalFile = "1gnaq7ya4grjwadz58r9g10dybgg50ch89bhbnhyicdins2aa9b2"; libraryHaskellDepends = [ base bytestring conduit http-client req resourcet transformers ]; @@ -175461,23 +176440,6 @@ self: { }: mkDerivation { pname = "resourcet"; - version = "1.2.0"; - sha256 = "09pscvkfr4cnicipdmx156xbxshg9aqgy0z3h0lcvxbhl5qwjp89"; - libraryHaskellDepends = [ - base containers exceptions mtl primitive transformers unliftio-core - ]; - testHaskellDepends = [ base hspec transformers ]; - homepage = "http://github.com/snoyberg/conduit"; - description = "Deterministic allocation and freeing of scarce resources"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "resourcet_1_2_1" = callPackage - ({ mkDerivation, base, containers, exceptions, hspec, mtl - , primitive, transformers, unliftio-core - }: - mkDerivation { - pname = "resourcet"; version = "1.2.1"; sha256 = "0rzjzh34s36ssign7akqjnwnjxf11c3511wk7ky0xxy0dqmc2rg7"; libraryHaskellDepends = [ @@ -175487,7 +176449,6 @@ self: { homepage = "http://github.com/snoyberg/conduit"; description = "Deterministic allocation and freeing of scarce resources"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "respond" = callPackage @@ -176466,8 +177427,8 @@ self: { }: mkDerivation { pname = "rio"; - version = "0.1.0.0"; - sha256 = "0k3r7859in1dyybc7lr3bqh91harf7g5yknwxmmsqnhlffzc6ygr"; + version = "0.1.1.0"; + sha256 = "0mr78bd5xcq4gxc7vhz1k70gxbng2rbpip648fs4k0hb7gf2z0ds"; libraryHaskellDepends = [ base bytestring containers deepseq directory exceptions filepath hashable microlens mtl primitive process text time typed-process @@ -177891,8 +178852,8 @@ self: { }: mkDerivation { pname = "rtcm"; - version = "0.2.15"; - sha256 = "0si1cj5py2dwcdxwy2yix9bbfmx7gysbdshy5ql38r963yjdhfxs"; + version = "0.2.16"; + sha256 = "0sfllzq97yl1dn3f9avi538121kn7bj5syc27g7139fqrjhvjy18"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -178381,6 +179342,17 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "safe-coerce" = callPackage + ({ mkDerivation, base }: + mkDerivation { + pname = "safe-coerce"; + version = "0.1.0.0"; + sha256 = "0qv4a6p547cnyvchnjrya8paq39gqpnbska9v5l64lqn3a28yk8p"; + libraryHaskellDepends = [ base ]; + description = "A friendly shorthand for an old friend"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "safe-exceptions" = callPackage ({ mkDerivation, base, deepseq, exceptions, hspec, transformers , void @@ -178504,19 +179476,20 @@ self: { "safe-money" = callPackage ({ mkDerivation, aeson, base, binary, bytestring, cereal , constraints, deepseq, hashable, serialise, store, tasty - , tasty-hunit, tasty-quickcheck, text, xmlbf + , tasty-hunit, tasty-quickcheck, text, vector-space, xmlbf }: mkDerivation { pname = "safe-money"; - version = "0.4.1"; - sha256 = "1ql02j1xb3m35y7axi3hsig894jzwzsm4l28ssms2m70lmbwv0qb"; + version = "0.6"; + sha256 = "1l8gn9vscng92s1dkfj2fa55k63jnzcnw590r5a8n7dqwaycpz7r"; libraryHaskellDepends = [ aeson base binary cereal constraints deepseq hashable serialise - store text xmlbf + store text vector-space xmlbf ]; testHaskellDepends = [ aeson base binary bytestring cereal constraints deepseq hashable - serialise store tasty tasty-hunit tasty-quickcheck text xmlbf + serialise store tasty tasty-hunit tasty-quickcheck text + vector-space xmlbf ]; homepage = "https://github.com/k0001/safe-money"; description = "Type-safe and lossless encoding and manipulation of money, fiat currencies, crypto currencies and precious metals"; @@ -178789,16 +179762,17 @@ self: { "saltine" = callPackage ({ mkDerivation, base, bytestring, libsodium, profunctors - , QuickCheck, test-framework, test-framework-quickcheck2 + , QuickCheck, semigroups, test-framework + , test-framework-quickcheck2 }: mkDerivation { pname = "saltine"; - version = "0.1.0.0"; - sha256 = "1hkdvw4fr2p2wmgq9ghna0kq9x9yv3kc9sm9wh0c71cl7gxk9g52"; + version = "0.1.0.1"; + sha256 = "05m3w0xibnhk3whzp7rzn2y2hv9f2i8pyvjnmzsxwbs8ws30cac5"; libraryHaskellDepends = [ base bytestring profunctors ]; libraryPkgconfigDepends = [ libsodium ]; testHaskellDepends = [ - base bytestring QuickCheck test-framework + base bytestring QuickCheck semigroups test-framework test-framework-quickcheck2 ]; description = "Cryptography that's easy to digest (NaCl/libsodium bindings)"; @@ -178988,8 +179962,8 @@ self: { }: mkDerivation { pname = "sampling"; - version = "0.3.2"; - sha256 = "0kl2d53rp0wi3fb0apm8czzx1wj93ljl3a17w6yibyqgc3j5cqd6"; + version = "0.3.3"; + sha256 = "038fl0mdim3r25jsj8bgvnmkd7iy00hpwbc0yqwijsqyss9xrgn8"; libraryHaskellDepends = [ base containers foldl mwc-random primitive vector ]; @@ -179338,6 +180312,25 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "sax" = callPackage + ({ mkDerivation, base, bytestring, deepseq, hspec, mtl, streaming + , text, xeno + }: + mkDerivation { + pname = "sax"; + version = "0.1.0.0"; + sha256 = "08hw88sccb1jb6iki622a988b8j5panbnjpgqcmsi1yx2c9nyxkj"; + revision = "3"; + editedCabalFile = "1gzalbr1v4x99cgrbs5s81fr2y0lzh0qhhi7r5fbxigc2yk9z0gg"; + libraryHaskellDepends = [ + base bytestring deepseq mtl streaming text xeno + ]; + testHaskellDepends = [ base bytestring hspec ]; + homepage = "https://github.com/dredozubov/sax-parser"; + description = "Monadic streaming XML parser"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "say" = callPackage ({ mkDerivation, base, bytestring, criterion, hspec, temporary , text, transformers @@ -179360,12 +180353,12 @@ self: { ({ mkDerivation, aeson, array, base, base64-bytestring , basic-prelude, binary, binary-conduit, bytestring, conduit , conduit-extra, data-binary-ieee754, lens, lens-aeson, monad-loops - , resourcet, tasty, tasty-hunit, template-haskell, text, yaml + , resourcet, tasty, tasty-hunit, template-haskell, text, time, yaml }: mkDerivation { pname = "sbp"; - version = "2.3.13"; - sha256 = "0gvjqddnvbr3vn7qaajqqbh23p17vavj0p97zwh6fbizkxpj25k9"; + version = "2.3.16"; + sha256 = "0m8i5n47bzlifp5pq6hkal7zbjga5j305sfccgjyrbiwpp1sxfg3"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -179375,7 +180368,7 @@ self: { ]; executableHaskellDepends = [ aeson base basic-prelude binary-conduit bytestring conduit - conduit-extra resourcet yaml + conduit-extra resourcet time yaml ]; testHaskellDepends = [ base basic-prelude tasty tasty-hunit ]; homepage = "https://github.com/swift-nav/libsbp"; @@ -180568,8 +181561,8 @@ self: { }: mkDerivation { pname = "scroll"; - version = "1.20170122"; - sha256 = "0f4blgfaz69y2i6cj91zq63v5dqv7invjvqv5a4l1rgjixpn7dc9"; + version = "1.20180421"; + sha256 = "0apzrvf99rskj4dbmn57jjxrsf19j436s8a09m950df5aws3a0wj"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -180856,6 +181849,25 @@ self: { hydraPlatforms = [ "i686-linux" "x86_64-linux" ]; }) {inherit (pkgs) SDL2; inherit (pkgs) SDL2_ttf;}; + "sdl2-ttf_2_1_0" = callPackage + ({ mkDerivation, base, bytestring, SDL2, sdl2, SDL2_ttf + , template-haskell, text, transformers + }: + mkDerivation { + pname = "sdl2-ttf"; + version = "2.1.0"; + sha256 = "1xw05jgv6x9xplahwf3jjdq6v3mha4s7bb27kn8x66764glnyrf7"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base bytestring sdl2 template-haskell text transformers + ]; + libraryPkgconfigDepends = [ SDL2 SDL2_ttf ]; + description = "Bindings to SDL2_ttf"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {inherit (pkgs) SDL2; inherit (pkgs) SDL2_ttf;}; + "sdnv" = callPackage ({ mkDerivation, base, binary, bytestring }: mkDerivation { @@ -180870,22 +181882,22 @@ self: { "sdr" = callPackage ({ mkDerivation, array, base, bytestring, cairo, cereal, Chart , Chart-cairo, colour, containers, criterion, Decimal - , dynamic-graph, either, fftwRaw, GLFW-b, mwc-random, OpenGL + , dynamic-graph, fftwRaw, GLFW-b, mwc-random, OpenGL , optparse-applicative, pango, pipes, pipes-bytestring , pipes-concurrency, primitive, pulse-simple, QuickCheck, rtlsdr , storable-complex, test-framework, test-framework-quickcheck2 - , time, tuple, vector + , time, transformers, tuple, vector }: mkDerivation { pname = "sdr"; - version = "0.1.0.10"; - sha256 = "1cjp05sk558vcwasbi15j6qzpa9icfqcyjsvz3a4b2fb59z6gv6z"; + version = "0.1.0.11"; + sha256 = "0gkf7ql1a40vpb4qaivcyygvlykp4whljmhp2jy37bk56zr45yvv"; libraryHaskellDepends = [ array base bytestring cairo cereal Chart Chart-cairo colour - containers Decimal dynamic-graph either fftwRaw GLFW-b mwc-random - OpenGL optparse-applicative pango pipes pipes-bytestring - pipes-concurrency primitive pulse-simple rtlsdr storable-complex - time tuple vector + containers Decimal dynamic-graph fftwRaw GLFW-b mwc-random OpenGL + optparse-applicative pango pipes pipes-bytestring pipes-concurrency + primitive pulse-simple rtlsdr storable-complex time transformers + tuple vector ]; testHaskellDepends = [ base primitive QuickCheck storable-complex test-framework @@ -181607,13 +182619,19 @@ self: { }) {}; "semirings" = callPackage - ({ mkDerivation }: + ({ mkDerivation, base, constrictor, containers, hashable + , integer-gmp, unordered-containers, vector + }: mkDerivation { pname = "semirings"; - version = "0.0.0"; - sha256 = "0dc4vi7zlpvz12b9hvq5b6v621aw84hp331rcbn617gpw7dvflcq"; - doHaddock = false; - description = "TBA"; + version = "0.1.1"; + sha256 = "1vrvid3ix80vwmf7qmp5f1f97nyzkq4a01bxf62kpqlbri2m9mz3"; + libraryHaskellDepends = [ + base constrictor containers hashable integer-gmp + unordered-containers vector + ]; + homepage = "http://github.com/chessai/semirings"; + description = "two monoids as one, in holy haskimony"; license = stdenv.lib.licenses.bsd3; }) {}; @@ -181639,8 +182657,8 @@ self: { }: mkDerivation { pname = "semver-range"; - version = "0.2.2"; - sha256 = "0rmllgibgyixqq59265qnygxlgp87lp1cfqzlfpzvvwl1kaixds5"; + version = "0.2.7"; + sha256 = "04492jx61yj4vq9bf1jg3xnviy22wb03d1kf358dy7w6xx1zzlfc"; libraryHaskellDepends = [ base classy-prelude parsec text unordered-containers ]; @@ -181753,8 +182771,8 @@ self: { }: mkDerivation { pname = "sensu-run"; - version = "0.4.0.4"; - sha256 = "1pgzfa6ns67fq5cx7qizwjfb2gw6awx012iwhskx8s4wg9snbq5y"; + version = "0.4.0.5"; + sha256 = "0mmpfxc4vzcz1714fgskbjkrfb9bxh6wjcpd66cwbkb9d8nsa0f7"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -181767,21 +182785,22 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "sensu-run_0_4_0_5" = callPackage - ({ mkDerivation, aeson, base, bytestring, filepath, http-client - , http-types, lens, network, optparse-applicative, process - , temporary, text, time, unix, unix-compat, vector, wreq + "sensu-run_0_5_0" = callPackage + ({ mkDerivation, aeson, async, base, bytestring, filepath + , http-client, http-client-tls, http-types, lens, network + , optparse-applicative, process, temporary, text, time, unix + , unix-compat, vector, wreq }: mkDerivation { pname = "sensu-run"; - version = "0.4.0.5"; - sha256 = "0mmpfxc4vzcz1714fgskbjkrfb9bxh6wjcpd66cwbkb9d8nsa0f7"; + version = "0.5.0"; + sha256 = "0826al67dwzdyazqkvrcsbxdv6gg6zk52q32avfz7l8dlpswgr9m"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ - aeson base bytestring filepath http-client http-types lens network - optparse-applicative process temporary text time unix unix-compat - vector wreq + aeson async base bytestring filepath http-client http-client-tls + http-types lens network optparse-applicative process temporary text + time unix unix-compat vector wreq ]; homepage = "https://github.com/maoe/sensu-run#readme"; description = "A tool to send command execution results to Sensu"; @@ -182304,10 +183323,8 @@ self: { }: mkDerivation { pname = "servant"; - version = "0.13"; - sha256 = "0fmwcrkjlq1rnlbzdn918z54pqbwrjpgwy2isxmfykb31m2pn230"; - revision = "1"; - editedCabalFile = "1l1a52xard2ax9avh1ic893gykhlvrvgw0cncjsaqvi9rvkd047y"; + version = "0.13.0.1"; + sha256 = "0vfypxdhz1yqkj6ini41ylas91jklvn05rrnarp4d57rli498jx7"; setupHaskellDepends = [ base Cabal cabal-doctest ]; libraryHaskellDepends = [ aeson attoparsec base base-compat bytestring case-insensitive @@ -182589,8 +183606,8 @@ self: { }: mkDerivation { pname = "servant-auth-token-acid"; - version = "0.5.3.0"; - sha256 = "1fwzsx13lvqaaxh8cfs7zi8l2a0c7kgz8gnnwgssrasnk27jsc20"; + version = "0.5.3.1"; + sha256 = "0mndi1b0sgfik7yij3l65bcsqp820igbf09nnrk8dmznnama56y4"; libraryHaskellDepends = [ acid-state aeson-injector base bytestring containers ghc-prim monad-control mtl safe safecopy servant-auth-token @@ -182713,8 +183730,8 @@ self: { pname = "servant-cassava"; version = "0.10"; sha256 = "03jnyghwa5kjbl5j55njmp7as92flw91zs9cgdvb4jrsdy85sb4v"; - revision = "1"; - editedCabalFile = "165q0rvbk09z4k5zwhpx6380gakqbbz2xwvw40ahpjf46p0k9159"; + revision = "2"; + editedCabalFile = "11f5azqs007dfk5zr6sa43cri809k7jlf680gf3d7zcwhlf3xiq4"; libraryHaskellDepends = [ base base-compat bytestring cassava http-media servant vector ]; @@ -182725,6 +183742,7 @@ self: { homepage = "http://haskell-servant.readthedocs.org/"; description = "Servant CSV content-type for cassava"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "servant-checked-exceptions" = callPackage @@ -182764,10 +183782,8 @@ self: { }: mkDerivation { pname = "servant-client"; - version = "0.13"; - sha256 = "0bfrc3j2b6mbsvbv66l7mh3klkrrfdjvaq5s834jiivaavc6zf93"; - revision = "1"; - editedCabalFile = "0kdymqs9k90ig840bbj58znmfzlgr81jk7pfj1ygdvikjz1k1lpk"; + version = "0.13.0.1"; + sha256 = "120qs135arlby811p9z6zqjyrhsm517dq1xq41x3s2f167zkd7q8"; libraryHaskellDepends = [ aeson attoparsec base base-compat bytestring containers exceptions http-client http-client-tls http-media http-types monad-control mtl @@ -182794,10 +183810,8 @@ self: { }: mkDerivation { pname = "servant-client-core"; - version = "0.13"; - sha256 = "1n7s47cqvahzfyyb4cwnq72a0qyrk8ybx4yj3g4lw9va2zlj78vp"; - revision = "1"; - editedCabalFile = "0zxkc0p436clpmh1y30d3ybqw12q2pk2gzfyjjgh17yvhzxzddnb"; + version = "0.13.0.1"; + sha256 = "0fr5lb5ra0nzjay9rm3xyyc01ijqxwr9wa0yxsjx1vippfnbds70"; libraryHaskellDepends = [ base base-compat base64-bytestring bytestring containers exceptions generics-sop http-api-data http-media http-types mtl network-uri @@ -182881,8 +183895,8 @@ self: { pname = "servant-docs"; version = "0.11.2"; sha256 = "1x6lvpvlm1lh51y2pmldrjdjjrs5qnq44m2abczr75fjjy6hla3b"; - revision = "1"; - editedCabalFile = "0pm5gclgwna9bw3avjfp1pghzbk0a32sbd9v3fh321gmsax1h4zi"; + revision = "2"; + editedCabalFile = "17nv36pm0vv0lgfyk5ay65h7i5bdfq48n0npawcvmqfjsls61xs4"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -183062,6 +184076,8 @@ self: { pname = "servant-foreign"; version = "0.11.1"; sha256 = "01cq938b4szvnapf8c4ir8j09aq25jwgnp3jbfxnja027c1v3735"; + revision = "1"; + editedCabalFile = "1g9631l7cw0kgnsidi943fnzkvddjnm3vgm11ha5vh10pczvn6rb"; libraryHaskellDepends = [ base base-compat http-types lens servant text ]; @@ -183332,6 +184348,8 @@ self: { pname = "servant-mock"; version = "0.8.4"; sha256 = "1705fw63lrzw79w1ypcdlf35d8qxx247q8isiqh28wzmc4j3kmnr"; + revision = "1"; + editedCabalFile = "0izm1slx384cgfaf16r3w1h6cqpssahphb9b0ccy2m04ysgy7chp"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -183411,14 +184429,19 @@ self: { }) {}; "servant-pagination" = callPackage - ({ mkDerivation, base, safe, servant, servant-server, text }: + ({ mkDerivation, base, hspec, QuickCheck, safe, servant + , servant-server, text + }: mkDerivation { pname = "servant-pagination"; - version = "2.0.0"; - sha256 = "1z6sr43ir9sl85x65yfj21s77y1fqwzfmrfgjlqdas2zygd3fhh3"; + version = "2.1.0"; + sha256 = "00mbg8sxjwaxa6xjgaahdzjqppc01y6qzph6g5sc40rnp3j8ws2g"; + revision = "1"; + editedCabalFile = "0vb7v8yb1g1aqnnypa2hjsh58q2m9zhgz04dyj1vna1pg4yl3691"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base safe servant servant-server text ]; + testHaskellDepends = [ base hspec QuickCheck servant-server text ]; homepage = "https://github.com/chordify/haskell-servant-pagination"; description = "Type-safe pagination for Servant APIs"; license = stdenv.lib.licenses.lgpl3; @@ -183706,10 +184729,8 @@ self: { }: mkDerivation { pname = "servant-server"; - version = "0.13"; - sha256 = "09hqihij87h031qcr4swsn82fsv8v1qklqc2hl0is8rd8bzi2cjy"; - revision = "1"; - editedCabalFile = "0kf88s2wkijfznp0sk3mrfyhr9rnq3kqpsl26di953ynxgd6z4yd"; + version = "0.13.0.1"; + sha256 = "0fggdqz2d6q96x8vnm64yvarg4fgxqh0jd3vis6yxpybfi174arm"; isLibrary = true; isExecutable = true; setupHaskellDepends = [ base Cabal cabal-doctest ]; @@ -183908,6 +184929,77 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "servant-swagger-ui_0_3_0_3_13_2" = callPackage + ({ mkDerivation, base, bytestring, file-embed-lzma, servant + , servant-server, servant-swagger-ui-core, swagger2, text + }: + mkDerivation { + pname = "servant-swagger-ui"; + version = "0.3.0.3.13.2"; + sha256 = "0llkcag9bnhvni6ddar966i0pwql93s5icvw6pxa9ra5v14v7p5n"; + libraryHaskellDepends = [ + base bytestring file-embed-lzma servant servant-server + servant-swagger-ui-core swagger2 text + ]; + homepage = "https://github.com/phadej/servant-swagger-ui"; + description = "Servant swagger ui"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + + "servant-swagger-ui-core" = callPackage + ({ mkDerivation, base, blaze-markup, bytestring, http-media + , servant, servant-blaze, servant-server, swagger2, text + , transformers, transformers-compat, wai-app-static + }: + mkDerivation { + pname = "servant-swagger-ui-core"; + version = "0.3"; + sha256 = "1ji54q9x787dr5l81qn0shw2n3b8k9aglli03gxfbvs0l7ga5xrd"; + libraryHaskellDepends = [ + base blaze-markup bytestring http-media servant servant-blaze + servant-server swagger2 text transformers transformers-compat + wai-app-static + ]; + homepage = "https://github.com/phadej/servant-swagger-ui"; + description = "Servant swagger ui core components"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "servant-swagger-ui-jensoleg" = callPackage + ({ mkDerivation, base, bytestring, file-embed-lzma, servant + , servant-server, servant-swagger-ui-core, swagger2, text + }: + mkDerivation { + pname = "servant-swagger-ui-jensoleg"; + version = "0.3"; + sha256 = "1ymw2lkfn0bkmddvpmv0ikv45fqac2zidnli8bfyp92jf0b5dnik"; + libraryHaskellDepends = [ + base bytestring file-embed-lzma servant servant-server + servant-swagger-ui-core swagger2 text + ]; + homepage = "https://github.com/phadej/servant-swagger-ui"; + description = "Servant swagger ui: Jens-Ole Graulund theme"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "servant-swagger-ui-redoc" = callPackage + ({ mkDerivation, base, bytestring, file-embed-lzma, servant + , servant-server, servant-swagger-ui-core, swagger2, text + }: + mkDerivation { + pname = "servant-swagger-ui-redoc"; + version = "0.3.0.1.21.2"; + sha256 = "1p3mq7m5hvid7g7jwpf2jz923512wlprh6gikq5x2vcb14d40qwl"; + libraryHaskellDepends = [ + base bytestring file-embed-lzma servant servant-server + servant-swagger-ui-core swagger2 text + ]; + homepage = "https://github.com/phadej/servant-swagger-ui"; + description = "Servant swagger ui: ReDoc theme"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "servant-tracing" = callPackage ({ mkDerivation, aeson, async, base, bytestring, bytestring-lexing , containers, hashable, http-api-data, http-client, HUnit @@ -183917,8 +185009,8 @@ self: { }: mkDerivation { pname = "servant-tracing"; - version = "0.1.0.0"; - sha256 = "0wpybm1vl1bh3sj3vam8y40a0sjrx2ys761jyqrj2dnqymk8xc10"; + version = "0.1.0.1"; + sha256 = "0dff51fywa1z1png1hhwpn4f8av2jxdsplin8h80aad459czaid2"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -183935,7 +185027,7 @@ self: { QuickCheck tasty tasty-hunit tasty-quickcheck text time transformers ]; - homepage = "https://github.com/ChrisCoffey/servant-tracing#readme"; + homepage = "https://github.com/ChrisCoffey/haskell-opentracing-light#readme"; license = stdenv.lib.licenses.mit; }) {}; @@ -183968,8 +185060,8 @@ self: { }: mkDerivation { pname = "servant-xml"; - version = "1.0.1.1"; - sha256 = "1j1gbwywbb8n6zplvf1drrlpp2ghh7n2jrzl9x7pjplplr6mfpbh"; + version = "1.0.1.2"; + sha256 = "16zyvxscplgb08jljg7k728lq17b8xmrri6xbq47j74namp2n55z"; libraryHaskellDepends = [ base bytestring http-media servant xmlbf xmlbf-xeno ]; @@ -184112,8 +185204,8 @@ self: { }: mkDerivation { pname = "serverless-haskell"; - version = "0.4.2"; - sha256 = "1cdpcin060qz5wicf8jqxayi2vjrhapybg401m3rw914s452safw"; + version = "0.4.3"; + sha256 = "0sdx28v81b6d5iankxbyb6psbrrsz5s2y01q36b7kbmg5sc4jiyy"; libraryHaskellDepends = [ aeson aeson-casing aeson-extra amazonka-core amazonka-kinesis amazonka-s3 base bytestring case-insensitive lens text time unix @@ -185020,16 +186112,15 @@ self: { "shake-ats" = callPackage ({ mkDerivation, base, binary, dependency, directory, hashable - , hs2ats, language-ats, microlens, microlens-th, shake, shake-ext - , text + , hs2ats, language-ats, lens, shake, shake-ext, text }: mkDerivation { pname = "shake-ats"; - version = "1.8.0.0"; - sha256 = "0p29bwh3jfjhy1x795irkwdq6qbmihh3sxgznfrwfz7pxwfx6nb7"; + version = "1.8.0.2"; + sha256 = "16gmyn1rbfx33dxxkyxrswa8cvjpiq3i2vm59hy4y9lag10nq9xn"; libraryHaskellDepends = [ - base binary dependency directory hashable hs2ats language-ats - microlens microlens-th shake shake-ext text + base binary dependency directory hashable hs2ats language-ats lens + shake shake-ext text ]; homepage = "https://github.com/vmchale/shake-ats#readme"; description = "Utilities for building ATS projects with shake"; @@ -185055,15 +186146,15 @@ self: { }) {}; "shake-ext" = callPackage - ({ mkDerivation, base, Cabal, composition-prelude, cpphs, directory - , shake, template-haskell + ({ mkDerivation, base, Cabal, cdeps, composition-prelude, cpphs + , directory, shake, template-haskell }: mkDerivation { pname = "shake-ext"; - version = "2.11.0.0"; - sha256 = "1ny8fj8wdshwp5df8skl3lsl5rp30fa8yclhh696pwk433pijc8f"; + version = "2.11.0.1"; + sha256 = "09gg30b8xiq2krz58lkavcgi1gybc5sn6snscdq8nj3qbxcvd0av"; libraryHaskellDepends = [ - base Cabal composition-prelude cpphs directory shake + base Cabal cdeps composition-prelude cpphs directory shake template-haskell ]; homepage = "https://hub.darcs.net/vmchale/shake-ext"; @@ -185222,8 +186313,8 @@ self: { }: mkDerivation { pname = "shakers"; - version = "0.0.45"; - sha256 = "0abzw28861k3larph3i6kaqsx4zcbk25f69y47v4i61riwdxcj0j"; + version = "0.0.48"; + sha256 = "1b2rwa6k4qj94mblfkvdj8asp26lknl6gfb4nfiqvi7m9kq27n45"; libraryHaskellDepends = [ base basic-prelude directory lifted-base shake ]; @@ -185670,6 +186761,19 @@ self: { license = "GPL"; }) {}; + "shellwords" = callPackage + ({ mkDerivation, base, hspec, megaparsec, text }: + mkDerivation { + pname = "shellwords"; + version = "0.1.1.0"; + sha256 = "1k3wmkmxr1rvjjrgg2swz8pl2nwf723q8zwpybadss4kz0f4w314"; + libraryHaskellDepends = [ base megaparsec text ]; + testHaskellDepends = [ base hspec text ]; + homepage = "https://github.com/pbrisbin/hs-shellwords#readme"; + description = "Parse strings into words, like a shell would"; + license = stdenv.lib.licenses.mit; + }) {}; + "shelly" = callPackage ({ mkDerivation, async, base, bytestring, containers, directory , enclosed-exceptions, exceptions, filepath, hspec, hspec-contrib @@ -185784,8 +186888,8 @@ self: { }: mkDerivation { pname = "shimmer"; - version = "0.1.3.1"; - sha256 = "04hj31pw04xzhpicblc7mvqrwbs7gf00hps7bffymk2xx4v6xfl7"; + version = "0.1.3.2"; + sha256 = "1mr8y0f83bs0ay02hm6nj173x6djz7dkfpriymjgicnaicn0mvrh"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -187102,6 +188206,23 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "simple-ui" = callPackage + ({ mkDerivation, base, data-default-class, exceptions, lens, mtl + , stm, template-haskell, transformers, vector, vty + }: + mkDerivation { + pname = "simple-ui"; + version = "0.1.1"; + sha256 = "1phag0frz7l4xgrgjc72x9iwjl1z1l6mpz7lnifjgn7zp3wdkwzs"; + enableSeparateDataOutput = true; + libraryHaskellDepends = [ + base data-default-class exceptions lens mtl stm template-haskell + transformers vector vty + ]; + description = "UI library for terminal"; + license = stdenv.lib.licenses.gpl2; + }) {}; + "simple-vec3" = callPackage ({ mkDerivation, base, criterion, doctest, doctest-discover , QuickCheck, tasty, tasty-quickcheck, vector @@ -187153,8 +188274,8 @@ self: { ({ mkDerivation, base, containers, generic-deriving, lens, text }: mkDerivation { pname = "simpleconfig"; - version = "0.0.8"; - sha256 = "0xxnirw7px97gssi2i823hsri168jy2rjwkhnkh6c80p997icdjf"; + version = "0.0.9"; + sha256 = "1xk8kxdnw118gzwh3i58iy0bdqi80f8li3bjydaqfn073106nf87"; libraryHaskellDepends = [ base containers lens ]; testHaskellDepends = [ base containers generic-deriving lens text @@ -187687,6 +188808,30 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "sized-grid" = callPackage + ({ mkDerivation, adjunctions, aeson, ansi-terminal, base, comonad + , constraints, distributive, generics-sop, hedgehog, HUnit, lens + , markdown-unlit, mtl, random, tasty, tasty-hedgehog, tasty-hunit + , vector, vector-space + }: + mkDerivation { + pname = "sized-grid"; + version = "0.1.0.0"; + sha256 = "1dj5sgmr8114i5ldpdmybwbwg5gkbm30kbk2196pq65jjcvjinxx"; + libraryHaskellDepends = [ + adjunctions aeson base comonad constraints distributive + generics-sop lens mtl random vector vector-space + ]; + testHaskellDepends = [ + adjunctions aeson ansi-terminal base comonad distributive + generics-sop hedgehog HUnit lens markdown-unlit tasty + tasty-hedgehog tasty-hunit vector-space + ]; + homepage = "https://github.com/edwardwas/sized-grid"; + description = "Multidimensional grids with sized specified at compile time"; + license = stdenv.lib.licenses.mit; + }) {}; + "sized-types" = callPackage ({ mkDerivation, array, base, base-compat, containers, singletons }: @@ -189810,8 +190955,8 @@ self: { }: mkDerivation { pname = "snaplet-persistent"; - version = "0.5.1"; - sha256 = "00p5f1xysv618yd4s9zw66zfjpa1gx7nld5k9ysm8vrd0haa4v5r"; + version = "0.6.0"; + sha256 = "1gvnf4fkylazq8bjb8kcv70vcd2k1r2dw5l53r624d10p23fsa8k"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base bytestring clientsession configurator errors heist lens @@ -191332,8 +192477,8 @@ self: { }: mkDerivation { pname = "sparrow"; - version = "0.0.1.3"; - sha256 = "1n1zwhkvhypjmfmk2lqg1dlpw6x720mxd9giggklywhac1brdnzy"; + version = "0.0.1.4"; + sha256 = "0awj1gbrcdq4xp9dgj7q3jbfivjb4pjhkhd3acfgdqk08142fzj7"; libraryHaskellDepends = [ aeson aeson-attoparsec async attoparsec attoparsec-uri base bytestring deepseq exceptions extractable-singleton hashable @@ -192433,8 +193578,8 @@ self: { ({ mkDerivation, base, QuickCheck, quickcheck-simple }: mkDerivation { pname = "sql-words"; - version = "0.1.5.1"; - sha256 = "0nr4ld96s3n48ydd15jsxb823kk2682wkjd2h7vqc306891qwwzd"; + version = "0.1.6.0"; + sha256 = "065ymcym5vm5xmprbzgv88wk3b09j44ajvsd59apw6qr32j218rn"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base QuickCheck quickcheck-simple ]; homepage = "http://khibino.github.io/haskell-relational-record/"; @@ -193683,8 +194828,8 @@ self: { }: mkDerivation { pname = "stackage2nix"; - version = "0.6.1"; - sha256 = "0wqa6lrn2l38grg4h24ihacchavsyglbvlmlsfh4s9h1300dngab"; + version = "0.7.0"; + sha256 = "0g3abhr63jnqw231k6kai9c5gqh15dyxrr78fqw5ga98l3p2b8jl"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -193696,7 +194841,8 @@ self: { ]; executableHaskellDepends = [ base ]; testHaskellDepends = [ - base bytestring Cabal hspec pretty shakespeare text yaml + base bytestring Cabal hspec network-uri pretty shakespeare text + yaml ]; homepage = "https://github.com/typeable/stackage2nix#readme"; description = "Convert Stack files into Nix build instructions"; @@ -194328,8 +195474,8 @@ self: { }: mkDerivation { pname = "status-notifier-item"; - version = "0.1.0.0"; - sha256 = "1g1gf3anqrg8mfdyjvymk5wlg0h4pfc0pv4wlw5phk6r93dxah1n"; + version = "0.2.1.0"; + sha256 = "1w81n87x70bqpskcp0nai9l8ry6hk518myn1cymi695x94vv9m6d"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -194342,6 +195488,7 @@ self: { homepage = "https://github.com/IvanMalison/status-notifier-item#readme"; description = "A wrapper over the StatusNotifierItem/libappindicator dbus specification"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "statvfs" = callPackage @@ -195281,15 +196428,15 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "stratosphere_0_20_0" = callPackage + "stratosphere_0_21_0" = callPackage ({ mkDerivation, aeson, aeson-pretty, base, bytestring, containers , hashable, hspec, hspec-discover, lens, template-haskell, text , unordered-containers }: mkDerivation { pname = "stratosphere"; - version = "0.20.0"; - sha256 = "0qkhgm951b377i7ny28faczw2s32rrmfvrh1lcgzfz7gszakb5bw"; + version = "0.21.0"; + sha256 = "14bahvq1yz51dwa6ljyj4l3aw3sv2njin00k01bvbizsqnbl8j8k"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -195462,6 +196609,18 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "streamdeck" = callPackage + ({ mkDerivation, base, bytestring, hidapi, mtl }: + mkDerivation { + pname = "streamdeck"; + version = "0.0.1"; + sha256 = "05qdnhhjqjs7cg7yvg9ryzxlw1mw3y5y55z4dy1cf5g98j01s449"; + libraryHaskellDepends = [ base bytestring hidapi mtl ]; + homepage = "https://github.com/wuest/haskell-streamdeck"; + description = "Control library for the Elgato Stream Deck"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "streamed" = callPackage ({ mkDerivation, alsa-core, alsa-seq, base, containers , data-accessor, data-accessor-transformers, event-list, midi @@ -197983,6 +199142,39 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "swagger2_2_2_2" = callPackage + ({ mkDerivation, aeson, aeson-qq, base, base-compat-batteries + , bytestring, Cabal, cabal-doctest, containers, doctest + , generics-sop, Glob, hashable, hspec, hspec-discover, http-media + , HUnit, insert-ordered-containers, lens, mtl, network, QuickCheck + , quickcheck-instances, scientific, template-haskell, text, time + , transformers, transformers-compat, unordered-containers + , uuid-types, vector + }: + mkDerivation { + pname = "swagger2"; + version = "2.2.2"; + sha256 = "1jkfmfrldqrfqqnjf0g4spd03w9xjmi35k33xnhsmfj122455lw2"; + setupHaskellDepends = [ base Cabal cabal-doctest ]; + libraryHaskellDepends = [ + aeson base base-compat-batteries bytestring containers generics-sop + hashable http-media insert-ordered-containers lens mtl network + scientific template-haskell text time transformers + transformers-compat unordered-containers uuid-types vector + ]; + testHaskellDepends = [ + aeson aeson-qq base base-compat-batteries bytestring containers + doctest Glob hashable hspec HUnit insert-ordered-containers lens + mtl QuickCheck quickcheck-instances text time unordered-containers + vector + ]; + testToolDepends = [ hspec-discover ]; + homepage = "https://github.com/GetShopTV/swagger2"; + description = "Swagger 2.0 data model"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "swapper" = callPackage ({ mkDerivation, base, binary, bytestring, deepseq, happstack-data , happstack-state, parallel, tokyocabinet @@ -199599,31 +200791,30 @@ self: { "taffybar" = callPackage ({ mkDerivation, alsa-mixer, base, cairo, ConfigFile, containers , dbus, directory, dyre, either, enclosed-exceptions, filepath - , glib, gtk-traymanager, gtk3, HStringTemplate, HTTP, mtl, multimap + , gi-gdk, gi-gdkpixbuf, gi-gdkx11, gi-gtk, glib, gtk-traymanager + , gtk3, haskell-gi-base, HStringTemplate, HTTP, mtl, multimap , network, network-uri, old-locale, parsec, process, rate-limit , safe, split, stm, text, time, time-locale-compat, time-units - , transformers, tuple, unix, utf8-string, X11, xdg-basedir, xml - , xml-helpers, xmonad, xmonad-contrib + , transformers, transformers-base, tuple, unix, utf8-string, X11 + , xdg-basedir, xml, xml-helpers, xmonad, xmonad-contrib }: mkDerivation { pname = "taffybar"; - version = "1.0.1"; - sha256 = "1agx7q73h8x53cl8i408yifrr80fbm47pwn46mi6abcp61s92chn"; + version = "1.0.2"; + sha256 = "05061nfnp0m833z1hqz8q6v4gphal03w4prvpfb12vwvsvsvsin9"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; libraryHaskellDepends = [ alsa-mixer base cairo ConfigFile containers dbus directory dyre - either enclosed-exceptions filepath glib gtk-traymanager gtk3 - HStringTemplate HTTP mtl multimap network network-uri old-locale - parsec process rate-limit safe split stm text time - time-locale-compat time-units transformers tuple unix utf8-string - X11 xdg-basedir xml xml-helpers xmonad xmonad-contrib - ]; - executableHaskellDepends = [ - base containers directory dyre filepath glib gtk3 mtl safe split - utf8-string X11 xdg-basedir + either enclosed-exceptions filepath gi-gdk gi-gdkpixbuf gi-gdkx11 + gi-gtk glib gtk-traymanager gtk3 haskell-gi-base HStringTemplate + HTTP mtl multimap network network-uri old-locale parsec process + rate-limit safe split stm text time time-locale-compat time-units + transformers transformers-base tuple unix utf8-string X11 + xdg-basedir xml xml-helpers xmonad xmonad-contrib ]; + executableHaskellDepends = [ base ]; homepage = "http://github.com/travitch/taffybar"; description = "A desktop bar similar to xmobar, but with more GUI"; license = stdenv.lib.licenses.bsd3; @@ -200313,6 +201504,8 @@ self: { pname = "tar"; version = "0.4.1.0"; sha256 = "05875pc5ns1fsbl9qgr8sqh29xl4mhvj0pwsa9z4afxv6h6328bm"; + revision = "1"; + editedCabalFile = "14ljxvasrda7qafz95gz3m0lpdsh4vvd6j8b3qkr2a2sp7cc0sis"; libraryHaskellDepends = [ base bytestring directory filepath old-time ]; @@ -200730,8 +201923,8 @@ self: { pname = "tasty-hedgehog"; version = "0.2.0.0"; sha256 = "10m1akbiblnjq9ljk469725k30b254d36d267rk51z2f171py42s"; - revision = "2"; - editedCabalFile = "1if3pmvnnfs8zrqbg5awdc9qafqhwrgq4f75bqcqlapljlhp4xx0"; + revision = "3"; + editedCabalFile = "1r1sbcz12j9kmbdfr7mjc6z22c3737jc7mf0kdk1v6a3zr6n1js9"; libraryHaskellDepends = [ base hedgehog tagged tasty ]; testHaskellDepends = [ base hedgehog tasty tasty-expected-failure @@ -201318,19 +202511,40 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "tdigest_0_2" = callPackage + ({ mkDerivation, base, base-compat, binary, Cabal, cabal-doctest + , deepseq, doctest, reducers, semigroupoids, semigroups, tasty + , tasty-quickcheck, transformers, vector, vector-algorithms + }: + mkDerivation { + pname = "tdigest"; + version = "0.2"; + sha256 = "1wii4rkk1xqqdkwd24g6xb3imrrgr4y2vq0a7kg606g3a5mllsvq"; + setupHaskellDepends = [ base Cabal cabal-doctest ]; + libraryHaskellDepends = [ + base base-compat binary deepseq reducers semigroupoids transformers + vector vector-algorithms + ]; + testHaskellDepends = [ + base base-compat binary deepseq doctest semigroups tasty + tasty-quickcheck vector vector-algorithms + ]; + homepage = "https://github.com/futurice/haskell-tdigest#readme"; + description = "On-line accumulation of rank-based statistics"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "tdigest-Chart" = callPackage ({ mkDerivation, base, base-compat, Chart, Chart-diagrams, colour - , lens, mwc-random, semigroupoids, semigroups, statistics, tdigest - , vector + , lens, mwc-random, semigroupoids, statistics, tdigest, vector }: mkDerivation { pname = "tdigest-Chart"; - version = "0"; - sha256 = "19vhyk2wgvxnaad32vj9fm0vw8rl5n1lp540dp4yn9dsbilhda3l"; - revision = "2"; - editedCabalFile = "139qimahwi9q2vm2z6m42ghk59drgii71lrgcj2dbai5x5fnfcgb"; + version = "0.2"; + sha256 = "1ciq7d187as9sk1dpccm2s02b6jdhij1l477wff0a7labgw21l0l"; libraryHaskellDepends = [ - base base-compat Chart colour lens semigroupoids semigroups tdigest + base base-compat Chart colour lens semigroupoids tdigest ]; testHaskellDepends = [ base base-compat Chart Chart-diagrams lens mwc-random statistics @@ -201820,8 +203034,8 @@ self: { ({ mkDerivation, base, Boolean }: mkDerivation { pname = "temporal-media"; - version = "0.6.2"; - sha256 = "0dsvpag8j2lfn6nz9wbzcbdfrzmq35ww9n8p5db638b11749sc97"; + version = "0.6.3"; + sha256 = "04qbbx32rs6mz5w3j7wj2hx744x858rv60hmpla3zpx2491r0qi9"; libraryHaskellDepends = [ base Boolean ]; homepage = "https://github.com/anton-k/temporal-media"; description = "data types for temporal media"; @@ -202285,6 +203499,7 @@ self: { homepage = "https://github.com/luna/terminal-text"; description = "Text data type for styled terminal output, including all standard ANSI effects (bold, italic, blinking) and ANSI / 256 / truecolor colors support for Unix and Windows (whenever possible)"; license = stdenv.lib.licenses.asl20; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "termination-combinators" = callPackage @@ -202977,8 +204192,8 @@ self: { }: mkDerivation { pname = "texbuilder"; - version = "0.1.4.0"; - sha256 = "0i301a78790cqhgb28bhc2qksymbx2jdr31m2x59nsj7hmw268b2"; + version = "0.1.4.1"; + sha256 = "0d8fwnrqlfjcls229iiq6x4v1a4yxm5qfsyymbqf6xwj8mcmqhb6"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -203191,6 +204406,8 @@ self: { pname = "text-format"; version = "0.3.1.1"; sha256 = "02zfgzfjvkaxbma1h2gr95h10c8q9gyaadag41q579j68iv15qbd"; + revision = "1"; + editedCabalFile = "1ap2paddh2q1ifs3nwdj0f1r7fypnsa669l7gdvgyfidz3w5vzic"; libraryHaskellDepends = [ array base double-conversion ghc-prim integer-gmp old-locale text time transformers @@ -203354,8 +204571,8 @@ self: { }: mkDerivation { pname = "text-ldap"; - version = "0.1.1.11"; - sha256 = "1921cdq9akvcn0hsgs07g2bvbpdvhb1h389yv9703472d0sz7pfs"; + version = "0.1.1.12"; + sha256 = "1kfp77nm8mvzi6h44334djr88z2w6syrwrvrqy2jfb65d0p9crbx"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -204218,8 +205435,8 @@ self: { ({ mkDerivation, base, template-haskell }: mkDerivation { pname = "th-data-compat"; - version = "0.0.2.5"; - sha256 = "1q2gggciz9s9ksn3h0mc5zffawz6j7pg6k1k96pqsx39f1bbrbqs"; + version = "0.0.2.6"; + sha256 = "1gbqrrpib065yw53063i7ydvm9ghwja30zc6s13mr2pp1l5a4bs2"; libraryHaskellDepends = [ base template-haskell ]; description = "Compatibility for data definition template of TH"; license = stdenv.lib.licenses.bsd3; @@ -204329,8 +205546,8 @@ self: { }: mkDerivation { pname = "th-format"; - version = "0.1.1.0"; - sha256 = "1axan3icxz9yxkra2kb9r66h9h51v4zbjncd1xsvgiplqmwf6fjl"; + version = "0.1.2.0"; + sha256 = "1wc9ndqv2qxk75b47s44j0lrx5h9hc1r4h1nvl01pbdks6yyi43j"; libraryHaskellDepends = [ base Earley haskell-src-meta template-haskell text ]; @@ -204531,8 +205748,8 @@ self: { ({ mkDerivation, base, template-haskell }: mkDerivation { pname = "th-reify-compat"; - version = "0.0.1.3"; - sha256 = "0byl2n0lj55vx2kyka172bwvw8zcyag78cnqs7y9yp4kl8ivwh8z"; + version = "0.0.1.4"; + sha256 = "08lal845ixcw62skw2rsi98y9v3dgj7bq4ygmlxm6k3lfgd9v7q8"; libraryHaskellDepends = [ base template-haskell ]; homepage = "http://github.com/khibino/haskell-th-reify-compat/"; description = "Compatibility for the result type of TH reify"; @@ -205446,41 +206663,21 @@ self: { "tidal" = callPackage ({ mkDerivation, base, colour, containers, hashable, hosc - , mersenne-random-pure64, mtl, parsec, safe, tasty, tasty-hunit - , text, time, websockets + , mersenne-random-pure64, mtl, parsec, safe, semigroups, tasty + , tasty-hunit, text, time, websockets }: mkDerivation { pname = "tidal"; - version = "0.9.6"; - sha256 = "1bldi0ygfn695x3an3qlsfzrbhmqcyhznkmsm5dsjmmh27zs1sx6"; - libraryHaskellDepends = [ - base colour containers hashable hosc mersenne-random-pure64 mtl - parsec safe text time websockets - ]; - testHaskellDepends = [ base tasty tasty-hunit ]; - homepage = "http://tidalcycles.org/"; - description = "Pattern language for improvised music"; - license = stdenv.lib.licenses.gpl3; - }) {}; - - "tidal_0_9_7" = callPackage - ({ mkDerivation, base, colour, containers, hashable, hosc - , mersenne-random-pure64, mtl, parsec, safe, tasty, tasty-hunit - , text, time, websockets - }: - mkDerivation { - pname = "tidal"; - version = "0.9.7"; - sha256 = "1b9005f9jf9pbiq5hwvqx4cw9c8hb8ygcpnb7qks4h5q6pf7yw6i"; + version = "0.9.9"; + sha256 = "1zpbnn1kw2ybmlg6g9yj39jhfp6sl12335rxqns0nfi8l2jjgbgr"; libraryHaskellDepends = [ base colour containers hashable hosc mersenne-random-pure64 mtl - parsec safe text time websockets + parsec safe semigroups text time websockets ]; testHaskellDepends = [ base tasty tasty-hunit ]; homepage = "http://tidalcycles.org/"; description = "Pattern language for improvised music"; license = stdenv.lib.licenses.gpl3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "tidal-midi" = callPackage @@ -205489,8 +206686,8 @@ self: { }: mkDerivation { pname = "tidal-midi"; - version = "0.9.5.2"; - sha256 = "0yjbrsg2lwj6x32ly0j6b4ms6i1s447jk2b7c6qp85pblaanmzqc"; + version = "0.9.10"; + sha256 = "0d59s9vq2jmlb8b1bbay6n5911fjm9j04c9545p4i5visniv61b4"; libraryHaskellDepends = [ base containers PortMidi tidal time transformers ]; @@ -206360,6 +207557,22 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "timestamp" = callPackage + ({ mkDerivation, base, cereal, foldl, generic-random, hashable + , QuickCheck, time + }: + mkDerivation { + pname = "timestamp"; + version = "0.2"; + sha256 = "1cl57lf53kqmrhplf944zqhp59vjah57yakqd9m2rn0m5n6hz6sg"; + libraryHaskellDepends = [ + base cereal foldl generic-random hashable QuickCheck time + ]; + homepage = "https://github.com/metrix-ai/timestamp"; + description = "Space-efficient Unix timestamp and utilities"; + license = stdenv.lib.licenses.mit; + }) {}; + "timestamp-subprocess-lines" = callPackage ({ mkDerivation, base, bytestring, process, split, time , transformers @@ -207224,16 +208437,13 @@ self: { }: mkDerivation { pname = "tomlcheck"; - version = "0.1.0.19"; - sha256 = "1ql24s1wy4c34rmxh8x8lggnkpx686l8x5zsp3asdsxlx0k8n8zp"; - isLibrary = true; + version = "0.1.0.23"; + sha256 = "0m58rrjrrd2n1w313806s9gyj840nzsm7vwdz40639mr3a6vaifg"; + isLibrary = false; isExecutable = true; - enableSeparateDataOutput = true; - libraryHaskellDepends = [ + executableHaskellDepends = [ base htoml-megaparsec megaparsec optparse-generic text ]; - executableHaskellDepends = [ base ]; - homepage = "https://github.com/vmchale/tomlcheck#readme"; description = "Command-line tool to check syntax of TOML files"; license = stdenv.lib.licenses.bsd3; }) {}; @@ -208074,6 +209284,8 @@ self: { pname = "transformers-either"; version = "0.0.2"; sha256 = "1122rgspazl3n9vghlzzg14hv6p0a66lf6r7hkim14p0rcagvx5a"; + revision = "1"; + editedCabalFile = "134big9w9307vjmj6p6m3wgmh4lrvv8dyg0iw2nm54p9kg0c6ga8"; libraryHaskellDepends = [ base text transformers ]; description = "An Either monad transformer"; license = stdenv.lib.licenses.bsd3; @@ -208085,6 +209297,8 @@ self: { pname = "transformers-either"; version = "0.1.0"; sha256 = "18a99isv93yf65b6j4863j23ss9j1mp1f815sblhgs2xaywswhvm"; + revision = "1"; + editedCabalFile = "1bhkkh73irjql1jhxdcrv1igmf0hqpnw2p0w1s6fwhiidx64kvy9"; libraryHaskellDepends = [ base exceptions text transformers ]; homepage = "http://github.com/tmcgilchrist/transformers-either/"; description = "An Either monad transformer"; @@ -208179,6 +209393,28 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "transient_0_6_0_1" = callPackage + ({ mkDerivation, atomic-primops, base, bytestring, containers + , directory, mtl, random, stm, time, transformers + }: + mkDerivation { + pname = "transient"; + version = "0.6.0.1"; + sha256 = "1k3zh4ahzzmj5ni0jyahzhfhbnvksa1ybq93541faa4g98h44ggy"; + libraryHaskellDepends = [ + atomic-primops base bytestring containers directory mtl random stm + time transformers + ]; + testHaskellDepends = [ + atomic-primops base bytestring containers directory mtl random stm + time transformers + ]; + homepage = "https://github.com/transient-haskell/transient"; + description = "composing programs with multithreading, events and distributed computing"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "transient-universe" = callPackage ({ mkDerivation, base, bytestring, case-insensitive, containers , directory, filepath, hashable, HTTP, iproute, mtl, network @@ -208212,18 +209448,51 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "transient-universe_0_5_0_0" = callPackage + ({ mkDerivation, base, bytestring, case-insensitive, containers + , directory, filepath, hashable, HTTP, iproute, mtl, network + , network-info, network-uri, process, random, stm, TCache, text + , time, transformers, transient, vector, websockets + }: + mkDerivation { + pname = "transient-universe"; + version = "0.5.0.0"; + sha256 = "1d3bp4xjpi28ph7fa9wm49ssg53jfvlq77ka0zvrkilw1j6f8v3l"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base bytestring case-insensitive containers directory filepath + hashable HTTP iproute mtl network network-info network-uri process + random stm TCache text time transformers transient vector + websockets + ]; + executableHaskellDepends = [ + base bytestring case-insensitive containers directory filepath + hashable HTTP mtl network network-info network-uri process random + stm TCache text time transformers transient vector websockets + ]; + testHaskellDepends = [ + base bytestring case-insensitive containers directory filepath + hashable HTTP mtl network network-info network-uri process random + stm TCache text time transformers transient vector websockets + ]; + homepage = "https://github.com/transient-haskell/transient-universe"; + description = "Remote execution and map-reduce: distributed computing for Transient"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "transient-universe-tls" = callPackage - ({ mkDerivation, base, bytestring, certificate, cprng-aes - , data-default, network, tls, transient, transient-universe - , x509-store + ({ mkDerivation, base, bytestring, cprng-aes, data-default, network + , tls, transient, transient-universe, x509-store, x509-system }: mkDerivation { pname = "transient-universe-tls"; - version = "0.1.0.0"; - sha256 = "0rw4plnc98ydb5za85hgdvprfxh1cry7ifyfzm93cyny09b38jwz"; + version = "0.1.1.0"; + sha256 = "0fawvdgm7a1s65jc3d3lfl38pak6xx39ian0cbx5sj3aqa7m99hs"; libraryHaskellDepends = [ - base bytestring certificate cprng-aes data-default network tls - transient transient-universe x509-store + base bytestring cprng-aes data-default network tls transient + transient-universe x509-store x509-system ]; homepage = "http://github.com/transient-haskell/transient-universe-tls"; description = "transient with secure communications"; @@ -208485,8 +209754,8 @@ self: { pname = "tree-diff"; version = "0.0.1"; sha256 = "049v44c520jy3icxlnrvbdblh3mjmvd7m6qmkzxbzkf02x63xqmz"; - revision = "2"; - editedCabalFile = "153gffmgdpk3crw9gg4i5mx4jdwglbbx0xwwhbx088j3alim3yvb"; + revision = "3"; + editedCabalFile = "04ajimrbywfnnnlx9axz3hmbi33c4g62hrmv52plgifjiw6c4y2y"; libraryHaskellDepends = [ aeson ansi-terminal ansi-wl-pprint base base-compat bytestring containers generics-sop hashable MemoTrie parsec parsers pretty @@ -208500,6 +209769,7 @@ self: { homepage = "https://github.com/phadej/tree-diff"; description = "Diffing of (expression) trees"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "tree-fun" = callPackage @@ -208536,6 +209806,7 @@ self: { homepage = "https://github.com/rampion/tree-traversals"; description = "Functions and newtype wrappers for traversing Trees"; license = stdenv.lib.licenses.cc0; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "tree-view" = callPackage @@ -209375,6 +210646,19 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "tuple-sop" = callPackage + ({ mkDerivation, base, generics-sop }: + mkDerivation { + pname = "tuple-sop"; + version = "0.1.0.0"; + sha256 = "08g0jzqngw1bkrn212rj6d5h7ppfar7q1p8b79049ivrich6zspj"; + libraryHaskellDepends = [ base generics-sop ]; + testHaskellDepends = [ base generics-sop ]; + homepage = "https://github.com/Ferdinand-vW/tuple-sop#readme"; + description = "functions on n-ary tuples using generics-sop"; + license = stdenv.lib.licenses.gpl3; + }) {}; + "tuple-th" = callPackage ({ mkDerivation, base, containers, template-haskell }: mkDerivation { @@ -209518,8 +210802,8 @@ self: { }: mkDerivation { pname = "turtle"; - version = "1.5.7"; - sha256 = "1qh33akv57wv11qg5bk8wa0gbjjq89gxakcg40b93qc8d0dd86wk"; + version = "1.5.8"; + sha256 = "0vp442byylqki6pabhg8bs27msqsdcwcnql40z003jx1hidccnq4"; libraryHaskellDepends = [ ansi-wl-pprint async base bytestring clock containers directory exceptions foldl hostname managed optional-args @@ -209613,20 +210897,20 @@ self: { ({ mkDerivation, aeson, ansi-wl-pprint, authenticate-oauth, base , bytestring, composition-prelude, containers, criterion , data-default, directory, extra, hspec, htoml-megaparsec - , http-client, http-client-tls, http-types, megaparsec, microlens + , http-client, http-client-tls, http-types, lens, megaparsec , optparse-applicative, split, text, unordered-containers }: mkDerivation { pname = "tweet-hs"; - version = "1.0.1.36"; - sha256 = "1gmp1936cmz42vf8m3622pjf6gb9c2pi8z0jfki1di9m1p1lbr53"; + version = "1.0.1.38"; + sha256 = "19k1z6wrizym21a29hx31yhv4y5m1w0474iqm8idyxih4fya3k7s"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ aeson ansi-wl-pprint authenticate-oauth base bytestring composition-prelude containers data-default extra htoml-megaparsec - http-client http-client-tls http-types megaparsec microlens split - text unordered-containers + http-client http-client-tls http-types lens megaparsec split text + unordered-containers ]; executableHaskellDepends = [ base bytestring directory optparse-applicative @@ -210486,8 +211770,8 @@ self: { ({ mkDerivation, base, containers, mtl, template-haskell }: mkDerivation { pname = "type-interpreter"; - version = "0.1.3"; - sha256 = "0gv1782vj48v9cybsyc8wqsgndg966gkpnzxaw7s9f2g1c18jj1s"; + version = "0.1.4"; + sha256 = "0743byvz8jry9b5li4wg5qc4nwl5ri0vjvsfdy3l4gkg1v1zh0ng"; libraryHaskellDepends = [ base containers mtl template-haskell ]; testHaskellDepends = [ base template-haskell ]; description = "Interpreter for Template Haskell types"; @@ -210667,8 +211951,8 @@ self: { }: mkDerivation { pname = "type-natural"; - version = "0.8.0.0"; - sha256 = "0cdym66cvidccimhfpy9i5wa29c1aa6vchnywniyaxlmivqjybj4"; + version = "0.8.0.1"; + sha256 = "0ybcivp219h8xw9k31f5cimlnj63y5s2br3rahxgdacvhdb678zg"; libraryHaskellDepends = [ base constraints equational-reasoning ghc-typelits-natnormalise ghc-typelits-presburger singletons template-haskell @@ -210867,21 +212151,21 @@ self: { homepage = "https://github.com/pikajude/type-tree"; description = "Tree representations of datatypes"; license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "type-unary" = callPackage - ({ mkDerivation, applicative-numbers, base, constraints, newtype - , ty, vector-space + ({ mkDerivation, applicative-numbers, base, constraints + , newtype-generics, ty, vector-space }: mkDerivation { pname = "type-unary"; - version = "0.3.0"; - sha256 = "1s84bw7fxxsqixy03892zb1s261fc0c8h5srsifs5mzgvhxkn20l"; - revision = "1"; - editedCabalFile = "03lz4iprlfl2bnh4isa2k7ddv1wxz8mqb7x1nmhjqbx34apbqi11"; + version = "0.3.2"; + sha256 = "12h20xjqr1abb5mb4fmij9j0vkfn7rwbidm2dr7ssbkk7cb5fv37"; enableSeparateDataOutput = true; libraryHaskellDepends = [ - applicative-numbers base constraints newtype ty vector-space + applicative-numbers base constraints newtype-generics ty + vector-space ]; homepage = "https://github.com/conal/type-unary"; description = "Type-level and typed unary natural numbers, inequality proofs, vectors"; @@ -212765,16 +214049,16 @@ self: { }) {}; "universum" = callPackage - ({ mkDerivation, base, bytestring, containers, criterion, deepseq - , doctest, ghc-prim, Glob, hashable, hedgehog, microlens - , microlens-mtl, mtl, safe-exceptions, semigroups, stm, tasty - , tasty-hedgehog, text, text-format, transformers, type-operators + ({ mkDerivation, base, bytestring, containers, deepseq, doctest + , gauge, ghc-prim, Glob, hashable, hedgehog, microlens + , microlens-mtl, mtl, safe-exceptions, stm, tasty, tasty-hedgehog + , text, text-format, transformers, type-operators , unordered-containers, utf8-string, vector }: mkDerivation { pname = "universum"; - version = "1.1.0"; - sha256 = "0k1gk9dba9f7w852m6y46gq1md3z0w29bgv4qy7xp3pk16h3axhp"; + version = "1.1.1"; + sha256 = "0l49k17f73hkywccvnir79iwlj7j7bb3p89j5kf5hdnk25biw2hq"; libraryHaskellDepends = [ base bytestring containers deepseq ghc-prim hashable microlens microlens-mtl mtl safe-exceptions stm text text-format transformers @@ -212785,8 +214069,7 @@ self: { utf8-string ]; benchmarkHaskellDepends = [ - base containers criterion deepseq hashable mtl semigroups text - unordered-containers + base containers gauge unordered-containers ]; homepage = "https://github.com/serokell/universum"; description = "Custom prelude used in Serokell"; @@ -212998,6 +214281,28 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "unliftio_0_2_7_0" = callPackage + ({ mkDerivation, async, base, deepseq, directory, filepath, hspec + , process, stm, time, transformers, unix, unliftio-core + }: + mkDerivation { + pname = "unliftio"; + version = "0.2.7.0"; + sha256 = "0qql93lq5w7qghl454cc3s1i8v1jb4h08n82fqkw0kli4g3g9njs"; + libraryHaskellDepends = [ + async base deepseq directory filepath process stm time transformers + unix unliftio-core + ]; + testHaskellDepends = [ + async base deepseq directory filepath hspec process stm time + transformers unix unliftio-core + ]; + homepage = "https://github.com/fpco/unliftio/tree/master/unliftio#readme"; + description = "The MonadUnliftIO typeclass for unlifting monads to IO (batteries included)"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "unliftio-core" = callPackage ({ mkDerivation, base, transformers }: mkDerivation { @@ -213018,8 +214323,8 @@ self: { }: mkDerivation { pname = "unliftio-pool"; - version = "0.1.0.0"; - sha256 = "13l0shpg0hmfp5n4rqfd6vl2x820w3558msy915qacbxfqvjis4x"; + version = "0.2.0.0"; + sha256 = "0alwn39ri4npgxfxvnv43bl8vfjhjl4ffcvv8l9nmrmzsh770p59"; libraryHaskellDepends = [ base resource-pool time transformers unliftio-core ]; @@ -213817,20 +215122,20 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "urlpath_8_1_0" = callPackage + "urlpath_9_0_0" = callPackage ({ mkDerivation, attoparsec-uri, base, exceptions, mmorph - , monad-control, monad-control-aligned, monad-logger, mtl + , monad-control, monad-control-aligned, monad-logger, mtl, path , path-extra, resourcet, split, strict, text, transformers , transformers-base, vector }: mkDerivation { pname = "urlpath"; - version = "8.1.0"; - sha256 = "0gv5mjhhmxq5zppda431vddpcl138qglxiyksj588d4zzg3kd8iy"; + version = "9.0.0"; + sha256 = "1ysjhb42sk34j29xy7hgf9b4qp90p6hrkqcmwdalvsasbwk8kgwh"; libraryHaskellDepends = [ attoparsec-uri base exceptions mmorph monad-control - monad-control-aligned monad-logger mtl path-extra resourcet split - strict text transformers transformers-base vector + monad-control-aligned monad-logger mtl path path-extra resourcet + split strict text transformers transformers-base vector ]; homepage = "https://github.com/athanclark/urlpath#readme"; description = "Painfully simple URL deployment"; @@ -214169,6 +215474,24 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "utf8-validator" = callPackage + ({ mkDerivation, base, bytestring, criterion, tasty, tasty-hunit + , text, utf8-string + }: + mkDerivation { + pname = "utf8-validator"; + version = "0.1.0.0"; + sha256 = "1r4y6gvd4jqfqv4qz01bhq1r17lsi548p6sr1byvkj00nia0cyjk"; + libraryHaskellDepends = [ base bytestring text ]; + testHaskellDepends = [ + base bytestring tasty tasty-hunit text utf8-string + ]; + benchmarkHaskellDepends = [ base criterion ]; + homepage = "https://github.com/edwardgeorge/utf8-validator#readme"; + description = "Constant-space UTF8 validator for ByteStrings"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "util" = callPackage ({ mkDerivation, base }: mkDerivation { @@ -214857,6 +216180,20 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "validity_0_5_0_0" = callPackage + ({ mkDerivation, base, hspec }: + mkDerivation { + pname = "validity"; + version = "0.5.0.0"; + sha256 = "0hpdj3ckp2r8dklpjdrrbfd02maskxw2vrjnqnxsgi8s3j8avqsv"; + libraryHaskellDepends = [ base ]; + testHaskellDepends = [ base hspec ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Validity typeclass"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "validity-aeson" = callPackage ({ mkDerivation, aeson, base, validity, validity-scientific , validity-text, validity-unordered-containers, validity-vector @@ -214874,6 +216211,24 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "validity-aeson_0_2_0_0" = callPackage + ({ mkDerivation, aeson, base, validity, validity-scientific + , validity-text, validity-unordered-containers, validity-vector + }: + mkDerivation { + pname = "validity-aeson"; + version = "0.2.0.0"; + sha256 = "01ck9kbclrjxbjb7rvr1y95cizbdq5lzdd0xfpbpaf4rfgjd3w56"; + libraryHaskellDepends = [ + aeson base validity validity-scientific validity-text + validity-unordered-containers validity-vector + ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Validity instances for aeson"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "validity-bytestring" = callPackage ({ mkDerivation, base, bytestring, validity }: mkDerivation { @@ -214886,6 +216241,19 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "validity-bytestring_0_3_0_0" = callPackage + ({ mkDerivation, base, bytestring, validity }: + mkDerivation { + pname = "validity-bytestring"; + version = "0.3.0.0"; + sha256 = "1yxrpwxqn0262262j27sf1nb6iw6fnirypivnmpw0ghml28w7aym"; + libraryHaskellDepends = [ base bytestring validity ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Validity instances for bytestring"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "validity-containers" = callPackage ({ mkDerivation, base, containers, validity }: mkDerivation { @@ -214898,6 +216266,19 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "validity-containers_0_3_0_0" = callPackage + ({ mkDerivation, base, containers, validity }: + mkDerivation { + pname = "validity-containers"; + version = "0.3.0.0"; + sha256 = "1jh2f46x5gwhb5i5bmqn1vdn27way0nk7q2gphyjb62zrg3d3zq5"; + libraryHaskellDepends = [ base containers validity ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Validity instances for containers"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "validity-path" = callPackage ({ mkDerivation, base, filepath, path, validity }: mkDerivation { @@ -214910,6 +216291,24 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "validity-path_0_3_0_0" = callPackage + ({ mkDerivation, base, filepath, genvalidity-hspec, hspec, path + , validity + }: + mkDerivation { + pname = "validity-path"; + version = "0.3.0.0"; + sha256 = "1ijrzfk9jhlxxcdjqdq4cqz7ir7k7z9zrbamb18zai99hb6gg066"; + libraryHaskellDepends = [ base filepath path validity ]; + testHaskellDepends = [ + base filepath genvalidity-hspec hspec path validity + ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Validity instances for Path"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "validity-scientific" = callPackage ({ mkDerivation, base, scientific, validity }: mkDerivation { @@ -214922,6 +216321,19 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "validity-scientific_0_2_0_0" = callPackage + ({ mkDerivation, base, scientific, validity }: + mkDerivation { + pname = "validity-scientific"; + version = "0.2.0.0"; + sha256 = "0l4mzrhn6yhqd6kz7rwfvrqxk0dhwvfkh40pfjyzbkg5mvd1drhh"; + libraryHaskellDepends = [ base scientific validity ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Validity instances for scientific"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "validity-text" = callPackage ({ mkDerivation, base, bytestring, text, validity }: mkDerivation { @@ -214934,6 +216346,19 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "validity-text_0_3_0_0" = callPackage + ({ mkDerivation, base, bytestring, text, validity }: + mkDerivation { + pname = "validity-text"; + version = "0.3.0.0"; + sha256 = "190gkwa3b4rnhmah9idivvrv0val4crv8y3qy9s0aa44kpcj2b8m"; + libraryHaskellDepends = [ base bytestring text validity ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Validity instances for text"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "validity-time" = callPackage ({ mkDerivation, base, time, validity }: mkDerivation { @@ -214946,6 +216371,19 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "validity-time_0_2_0_0" = callPackage + ({ mkDerivation, base, time, validity }: + mkDerivation { + pname = "validity-time"; + version = "0.2.0.0"; + sha256 = "0rp1y2xq3h18ji3vaiv3w76kkdyql5y8xxxz730za6mrf1ffbnk4"; + libraryHaskellDepends = [ base time validity ]; + homepage = "https://github.com/NorfairKing/validity#readme"; + description = "Validity instances for time"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "validity-unordered-containers" = callPackage ({ mkDerivation, base, hashable, unordered-containers, validity }: mkDerivation { @@ -215788,16 +217226,17 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "vector-sized_1_0_0_0" = callPackage - ({ mkDerivation, base, deepseq, finite-typelits - , indexed-list-literals, primitive, vector + "vector-sized_1_0_1_0" = callPackage + ({ mkDerivation, adjunctions, base, deepseq, distributive + , finite-typelits, indexed-list-literals, primitive, vector }: mkDerivation { pname = "vector-sized"; - version = "1.0.0.0"; - sha256 = "1jn00l5nw2ws4j6z8fd2h312003vpi8a4ygakmrdg4580cwnjmls"; + version = "1.0.1.0"; + sha256 = "0p3bwqdz3k1a3ya7bj80d6crpbsk62wcvl6rkpkr0snqh4zq87zl"; libraryHaskellDepends = [ - base deepseq finite-typelits indexed-list-literals primitive vector + adjunctions base deepseq distributive finite-typelits + indexed-list-literals primitive vector ]; homepage = "http://github.com/expipiplus1/vector-sized#readme"; description = "Size tagged vectors"; @@ -215908,14 +217347,15 @@ self: { }: mkDerivation { pname = "vector-text"; - version = "1.1.1"; - sha256 = "0hwis2xqj86j3smk9dnq9rpf8hraxzjczpajbkzma50g2kagj5r8"; + version = "1.1.3"; + sha256 = "00x35fv78vp8rffvd7hsccl8vdxzzdzjrqzwvj0mr6g1wmg3p4i3"; libraryHaskellDepends = [ base binary prologue text vector vector-binary-instances ]; homepage = "https://github.com/luna/vector-text"; description = "Text implementation based on unboxed char vector"; license = stdenv.lib.licenses.asl20; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "vector-th-unbox" = callPackage @@ -216967,12 +218407,12 @@ self: { }) {}; "vulkan" = callPackage - ({ mkDerivation, base, vector-sized, vulkan }: + ({ mkDerivation, base, cpphs, vector-sized, vulkan }: mkDerivation { pname = "vulkan"; - version = "1.7.0.0"; - sha256 = "0rg9hv04j62z0ab2dg23qk09hkx4hnniwjmkqkv83vmdc5q47j0p"; - libraryHaskellDepends = [ base vector-sized ]; + version = "2.1.0.0"; + sha256 = "1w19ip6qc5qbscp06a2b58x9yhjc98naaq1gxymk7gs3iagylrzq"; + libraryHaskellDepends = [ base cpphs vector-sized ]; librarySystemDepends = [ vulkan ]; homepage = "http://github.com/expipiplus1/vulkan#readme"; description = "Bindings to the Vulkan graphics API"; @@ -216981,18 +218421,17 @@ self: { }) {vulkan = null;}; "vulkan-api" = callPackage - ({ mkDerivation, base, ghc-prim, vulkan }: + ({ mkDerivation, base }: mkDerivation { pname = "vulkan-api"; - version = "1.1.0.0"; - sha256 = "038iaiy16cyb0g6xhgax8333lz0y4jfmv4r8dqvvmnnmhiak5j8x"; - libraryHaskellDepends = [ base ghc-prim ]; - librarySystemDepends = [ vulkan ]; + version = "1.1.1.0"; + sha256 = "17209hslyqfx3lyh1a8sii3gn1ygsb5a81nampx1ym6f6gx9g3lh"; + libraryHaskellDepends = [ base ]; homepage = "https://github.com/achirkin/vulkan#readme"; description = "Low-level low-overhead vulkan api bindings"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; - }) {vulkan = null;}; + }) {}; "wacom-daemon" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, directory @@ -217916,8 +219355,8 @@ self: { }: mkDerivation { pname = "wai-middleware-content-type"; - version = "0.6.1.1"; - sha256 = "08lcbyycgr2mb8i00ncph38r0yixx6nn5yfkvv96700wfn0338q4"; + version = "0.6.1.2"; + sha256 = "057xrb6nik8imxg91chyhakddb0ywm7ccfkwjlyrbwrd5hm84j8r"; libraryHaskellDepends = [ aeson base blaze-builder blaze-html bytestring clay exceptions extractable-singleton hashable http-media http-types lucid mmorph @@ -218870,8 +220309,8 @@ self: { }: mkDerivation { pname = "warp"; - version = "3.2.18.2"; - sha256 = "01jmwq9a5xxig14qh30w2fspjv4rhprv6q6i6bsv1qy9m9n2mczb"; + version = "3.2.19"; + sha256 = "0laggqs2bjf4vn58fjpippbwd1i2z82ssmnyn6l0qb3q54d2fyqb"; libraryHaskellDepends = [ array async auto-update base bsb-http-chunked bytestring case-insensitive containers ghc-prim hashable http-date http-types @@ -218941,8 +220380,8 @@ self: { }: mkDerivation { pname = "warp-tls"; - version = "3.2.4.2"; - sha256 = "08g74490mpaghrvkb5z6pa6b6bby1a83js52pg5jlm9b5zfwcj2w"; + version = "3.2.4.3"; + sha256 = "17gj295fr98l7mkz2gdz6kahdnmja0sql3kvy2zab6q168g53kc4"; libraryHaskellDepends = [ base bytestring cryptonite data-default-class network streaming-commons tls tls-session-manager wai warp @@ -218979,8 +220418,8 @@ self: { }: mkDerivation { pname = "warped"; - version = "0.0.4"; - sha256 = "0gvsqabl1kh0vkzqiijkndk77jdc6md2c2p1f8bilrliqq2p21gq"; + version = "0.0.5"; + sha256 = "1gk7mfainbw8iyg8vqii39yl7n2dz052p8nrphhjbzphibl349jf"; libraryHaskellDepends = [ aeson base blaze-builder conduit http-types lifted-async monad-control preamble uuid wai wai-conduit wai-cors warp @@ -219070,6 +220509,8 @@ self: { pname = "wave"; version = "0.1.5"; sha256 = "03zycmwrchhqvi37fdvlzz2d1vl4hy0i8xyys1zznw38qfq0h2i5"; + revision = "1"; + editedCabalFile = "1wvgxay0r5rpcc7yxkznxxcp1za0ifxvk87w0xrilxgb35r3izz8"; enableSeparateDataOutput = true; libraryHaskellDepends = [ base bytestring cereal containers data-default-class transformers @@ -220551,23 +221992,6 @@ self: { "wild-bind" = callPackage ({ mkDerivation, base, containers, hspec, microlens, QuickCheck - , stm, text, transformers - }: - mkDerivation { - pname = "wild-bind"; - version = "0.1.1.1"; - sha256 = "00xs9m87skqnwv6cysy84bfbpnhb4jp46x08gn9f07n5jz113asi"; - libraryHaskellDepends = [ base containers text transformers ]; - testHaskellDepends = [ - base hspec microlens QuickCheck stm transformers - ]; - homepage = "https://github.com/debug-ito/wild-bind"; - description = "Dynamic key binding framework"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "wild-bind_0_1_2_0" = callPackage - ({ mkDerivation, base, containers, hspec, microlens, QuickCheck , semigroups, stm, text, transformers }: mkDerivation { @@ -220583,7 +222007,6 @@ self: { homepage = "https://github.com/debug-ito/wild-bind"; description = "Dynamic key binding framework"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "wild-bind-indicator" = callPackage @@ -220627,8 +222050,8 @@ self: { }: mkDerivation { pname = "wild-bind-x11"; - version = "0.2.0.1"; - sha256 = "0g02kv710yr8qzh48dcwzyn1aak9hz3ny2pq7v24g40kc7c6pd4d"; + version = "0.2.0.2"; + sha256 = "0vf6jm5gw76hcrwrqmfrq8niwh4z5p2wg0j0rh74wn9vbs6cm8cl"; libraryHaskellDepends = [ base containers fold-debounce mtl semigroups stm text transformers wild-bind X11 @@ -220641,14 +222064,14 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "wild-bind-x11_0_2_0_2" = callPackage + "wild-bind-x11_0_2_0_3" = callPackage ({ mkDerivation, async, base, containers, fold-debounce, hspec, mtl , semigroups, stm, text, time, transformers, wild-bind, X11 }: mkDerivation { pname = "wild-bind-x11"; - version = "0.2.0.2"; - sha256 = "0vf6jm5gw76hcrwrqmfrq8niwh4z5p2wg0j0rh74wn9vbs6cm8cl"; + version = "0.2.0.3"; + sha256 = "0naqmgkqqq83mnrp4ic97i6f6ak3h862jk6pa77c83qmz4ahh4ld"; libraryHaskellDepends = [ base containers fold-debounce mtl semigroups stm text transformers wild-bind X11 @@ -220663,14 +222086,12 @@ self: { }) {}; "wilton-ffi" = callPackage - ({ mkDerivation, aeson, base, bytestring }: + ({ mkDerivation, aeson, base, bytestring, utf8-string }: mkDerivation { pname = "wilton-ffi"; - version = "0.1.0.0"; - sha256 = "0l7smpizp4r59nfk73vyl1vrpgdnf8cfgny9r981bpn6bnv1iv7f"; - revision = "1"; - editedCabalFile = "0fkfffxfph1nip54j9f5hd05339mmg19hn7jwggsi4qmdpf2jd0y"; - libraryHaskellDepends = [ aeson base bytestring ]; + version = "0.2.0.0"; + sha256 = "1n2cgf0cnpr7f9rgf2369qnz3mm1qvylpzncc7s42vcrrq4x3wj7"; + libraryHaskellDepends = [ aeson base bytestring utf8-string ]; homepage = "https://github.com/wilton-iot/wilton-ffi#readme"; description = "Haskell modules support for Wilton JavaScript runtime"; license = stdenv.lib.licenses.mit; @@ -220788,8 +222209,8 @@ self: { }: mkDerivation { pname = "wires"; - version = "0.2.0"; - sha256 = "1c4ic3v3rrqanr6n3yhm8vy5i8sn5lwraks09kav60f4cc42s1nx"; + version = "0.2.1"; + sha256 = "0dh0kpmja296miax80y3qqq3s8rmab4d7yqdcxrhmy9gzq350hri"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -220960,10 +222381,8 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "wl-pprint"; - version = "1.2"; - sha256 = "166zvk4zwn2zaa9kx66m1av38m34qp6h4i65bri2sfnxgvx0700r"; - revision = "1"; - editedCabalFile = "04w1mm6c0k39x3aglrz5rgqjxszxb6jld0s7qrl4zhndl92nzi5c"; + version = "1.2.1"; + sha256 = "0kn7y8pdrv8f87zhd5mifcl8fy3b2zvnzmzwhdqhxxlyzwiq6z0c"; libraryHaskellDepends = [ base ]; description = "The Wadler/Leijen Pretty Printer"; license = stdenv.lib.licenses.bsd3; @@ -221071,6 +222490,18 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "wl-pprint-text_1_1_1_1" = callPackage + ({ mkDerivation, base, base-compat, text }: + mkDerivation { + pname = "wl-pprint-text"; + version = "1.1.1.1"; + sha256 = "1v227rc24ibb6qxiyhq9v9hv8ilkrm6i1snl5icblm8zgvpymplb"; + libraryHaskellDepends = [ base base-compat text ]; + description = "A Wadler/Leijen Pretty Printer for Text values"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "wlc-hs" = callPackage ({ mkDerivation, base, c2hs, containers, data-default, lens, pretty , process, transformers, wlc, xkbcommon @@ -221166,8 +222597,8 @@ self: { }: mkDerivation { pname = "wolf"; - version = "0.3.43"; - sha256 = "1iy9qbpwnnzq8d7fvpl8iqn8bc3iz44rvxi4ijjj5xd4z1w6i5fv"; + version = "0.3.44"; + sha256 = "096j1f0xzjrnk8z7niyx19w05nx5222rgfbhgx8df8jwhfz0ymw7"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -223471,6 +224902,31 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "xml-isogen_0_3_0" = callPackage + ({ mkDerivation, base, data-default, deepseq, dom-parser + , generic-arbitrary, hspec, lens, mtl, QuickCheck + , quickcheck-instances, semigroups, template-haskell, text + , xml-conduit, xml-conduit-writer + }: + mkDerivation { + pname = "xml-isogen"; + version = "0.3.0"; + sha256 = "05qa83jzmfqa5yhzgp3n3bxi0dvyy9xdfgq1ymi0wa6xnmxjv0cz"; + libraryHaskellDepends = [ + base deepseq dom-parser lens mtl QuickCheck semigroups + template-haskell text xml-conduit xml-conduit-writer + ]; + testHaskellDepends = [ + base data-default deepseq dom-parser generic-arbitrary hspec + QuickCheck quickcheck-instances semigroups xml-conduit + xml-conduit-writer + ]; + homepage = "https://github.com/typeable/xml-isogen"; + description = "Generate XML-isomorphic types"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "xml-lens" = callPackage ({ mkDerivation, base, case-insensitive, containers, lens, text , xml-conduit @@ -223795,8 +225251,8 @@ self: { }: mkDerivation { pname = "xmlbf"; - version = "0.3"; - sha256 = "0zvv7ajwj45wsm751951i37ncn2lh73d8h5vqhladi2g14pi9yjb"; + version = "0.4"; + sha256 = "1f63ibvv7ywly7paam238y4bjhvg7jmn87368dnv5lsz28mq432m"; libraryHaskellDepends = [ base bytestring containers text transformers unordered-containers ]; @@ -224132,8 +225588,8 @@ self: { }: mkDerivation { pname = "xmonad-extras"; - version = "0.13.2"; - sha256 = "1ixnr76gmym9gab6m6r2rvrrvakxa5kda6cll9nbq954sjvj54jx"; + version = "0.13.3"; + sha256 = "15gxkkni3d6mr7zlzyp6nvzv0jy3vfhjkd8zrdin2nxb5pwwbsp0"; configureFlags = [ "-f-with_hlist" "-fwith_parsec" "-fwith_split" ]; @@ -225526,36 +226982,6 @@ self: { }: mkDerivation { pname = "yesod-auth"; - version = "1.6.2"; - sha256 = "191sniq19glv0rdrhzqs2hhsjz9y25sqf15x0wnpmrmfh7jyyv6a"; - libraryHaskellDepends = [ - aeson authenticate base base16-bytestring base64-bytestring binary - blaze-builder blaze-html blaze-markup byteable bytestring conduit - conduit-extra containers cryptonite data-default email-validate - file-embed http-client http-client-tls http-conduit http-types - memory mime-mail network-uri nonce persistent persistent-template - random resourcet safe shakespeare template-haskell text time - transformers unliftio unliftio-core unordered-containers wai - yesod-core yesod-form yesod-persistent - ]; - homepage = "http://www.yesodweb.com/"; - description = "Authentication for Yesod"; - license = stdenv.lib.licenses.mit; - }) {}; - - "yesod-auth_1_6_3" = callPackage - ({ mkDerivation, aeson, authenticate, base, base16-bytestring - , base64-bytestring, binary, blaze-builder, blaze-html - , blaze-markup, byteable, bytestring, conduit, conduit-extra - , containers, cryptonite, data-default, email-validate, file-embed - , http-client, http-client-tls, http-conduit, http-types, memory - , mime-mail, network-uri, nonce, persistent, persistent-template - , random, resourcet, safe, shakespeare, template-haskell, text - , time, transformers, unliftio, unliftio-core, unordered-containers - , wai, yesod-core, yesod-form, yesod-persistent - }: - mkDerivation { - pname = "yesod-auth"; version = "1.6.3"; sha256 = "1f4qhsfgar7c2yq7rsm7g3wndg6hhwbmcmjz8dbljdwmzmxl5px0"; libraryHaskellDepends = [ @@ -225571,7 +226997,6 @@ self: { homepage = "http://www.yesodweb.com/"; description = "Authentication for Yesod"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "yesod-auth-account" = callPackage @@ -225874,19 +227299,18 @@ self: { "yesod-auth-oauth2" = callPackage ({ mkDerivation, aeson, base, bytestring, errors, hoauth2, hspec , http-client, http-conduit, http-types, microlens, random - , safe-exceptions, text, transformers, uri-bytestring, yesod-auth - , yesod-core + , safe-exceptions, text, uri-bytestring, yesod-auth, yesod-core }: mkDerivation { pname = "yesod-auth-oauth2"; - version = "0.4.1.0"; - sha256 = "1p0sxgi7cl6lqzkx478zva2byzanna6jicdrgdns2p91cnw5hlh9"; + version = "0.5.0.0"; + sha256 = "03qqaxwpdz15krnl8rnm6m3rlmpgfn1i41x1w7c4rhl701hy0vda"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ aeson base bytestring errors hoauth2 http-client http-conduit - http-types microlens random safe-exceptions text transformers - uri-bytestring yesod-auth yesod-core + http-types microlens random safe-exceptions text uri-bytestring + yesod-auth yesod-core ]; testHaskellDepends = [ base hspec uri-bytestring ]; homepage = "http://github.com/thoughtbot/yesod-auth-oauth2"; @@ -226138,46 +227562,6 @@ self: { }: mkDerivation { pname = "yesod-core"; - version = "1.6.2"; - sha256 = "0fcbp47rmljz0jas2gz9j7qswa4dab2fzf9mgs4sbk75s76i01b8"; - libraryHaskellDepends = [ - aeson auto-update base blaze-html blaze-markup byteable bytestring - case-insensitive cereal clientsession conduit conduit-extra - containers cookie deepseq deepseq-generics directory fast-logger - http-types monad-logger mtl old-locale parsec path-pieces primitive - random resourcet safe semigroups shakespeare template-haskell text - time transformers unix-compat unliftio unordered-containers vector - wai wai-extra wai-logger warp word8 - ]; - testHaskellDepends = [ - async base bytestring clientsession conduit conduit-extra - containers cookie hspec hspec-expectations http-types HUnit network - path-pieces QuickCheck random resourcet shakespeare - streaming-commons template-haskell text transformers unliftio wai - wai-extra - ]; - benchmarkHaskellDepends = [ - base blaze-html bytestring gauge shakespeare text transformers - ]; - homepage = "http://www.yesodweb.com/"; - description = "Creation of type-safe, RESTful web applications"; - license = stdenv.lib.licenses.mit; - }) {}; - - "yesod-core_1_6_3" = callPackage - ({ mkDerivation, aeson, async, auto-update, base, blaze-html - , blaze-markup, byteable, bytestring, case-insensitive, cereal - , clientsession, conduit, conduit-extra, containers, cookie - , deepseq, deepseq-generics, directory, fast-logger, gauge, hspec - , hspec-expectations, http-types, HUnit, monad-logger, mtl, network - , old-locale, parsec, path-pieces, primitive, QuickCheck, random - , resourcet, safe, semigroups, shakespeare, streaming-commons - , template-haskell, text, time, transformers, unix-compat, unliftio - , unordered-containers, vector, wai, wai-extra, wai-logger, warp - , word8 - }: - mkDerivation { - pname = "yesod-core"; version = "1.6.3"; sha256 = "0k2gwnbrpwwbna03bbi53fppgyn7x5g9167jyjcfyjb8qfn4pwxg"; libraryHaskellDepends = [ @@ -226202,7 +227586,6 @@ self: { homepage = "http://www.yesodweb.com/"; description = "Creation of type-safe, RESTful web applications"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "yesod-crud" = callPackage @@ -226718,8 +228101,8 @@ self: { }: mkDerivation { pname = "yesod-media-simple"; - version = "0.2.0.0"; - sha256 = "1sfz1iczsqhg8vasc4zyfwpw48hjlslfwf8r60a1c7kgrpa9yj6k"; + version = "0.2.0.1"; + sha256 = "1687c46qqdpzvalfi4dajsxaml1ljipysbvz9j1jargl3jrsdfqi"; libraryHaskellDepends = [ base bytestring diagrams-cairo diagrams-core diagrams-lib directory JuicyPixels vector yesod @@ -228795,8 +230178,8 @@ self: { }: mkDerivation { pname = "zifter"; - version = "0.0.1.6"; - sha256 = "0bswk4z26v020qkcm09cjkjkvwxsx1mrzrf3kajhwwzpb8vzxbdh"; + version = "0.0.1.7"; + sha256 = "1gdrnxa23lk885ldbn72n136acjfv8l0bnpf5v0lnypzl1hwp4rk"; libraryHaskellDepends = [ ansi-terminal async base directory exceptions filepath optparse-applicative path path-io process safe stm validity @@ -228963,8 +230346,8 @@ self: { pname = "zip"; version = "1.0.0"; sha256 = "166iqyrmghlwwnka1gyxqjh875x7d3h0jnljlaslfvkfjhvb9ym9"; - revision = "2"; - editedCabalFile = "14dcabh3h6b1c8yzjq848i7arprgx7imx2rb9s0y2v0ax6b4dm48"; + revision = "3"; + editedCabalFile = "0af1qpyn6vfzcdyi1md7aq39fznswxijzm0ap7mdwp0g0l7pcdyh"; libraryHaskellDepends = [ base bytestring bzlib-conduit case-insensitive cereal conduit conduit-extra containers digest directory dlist exceptions filepath @@ -229545,27 +230928,6 @@ self: { }: mkDerivation { pname = "ztail"; - version = "1.2.0.1"; - sha256 = "1gnxjk48jlz988k9mk5mc9hrfqj9wq4v7fbkk648ifmassxyx6wb"; - revision = "1"; - editedCabalFile = "1hsiq6k5rncq6qa9gax2d45vnb4q737sh8djch6b2bq6wc2vyg2d"; - isLibrary = false; - isExecutable = true; - executableHaskellDepends = [ - array base bytestring filepath hinotify process regex-posix time - unix unordered-containers - ]; - description = "Multi-file, colored, filtered log tailer"; - license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; - }) {}; - - "ztail_1_2_0_2" = callPackage - ({ mkDerivation, array, base, bytestring, filepath, hinotify - , process, regex-posix, time, unix, unordered-containers - }: - mkDerivation { - pname = "ztail"; version = "1.2.0.2"; sha256 = "05vpq3kiv1xrby2k1qn41s42cxxxblcgxpnw1sgyznx63pal2hx1"; isLibrary = false; diff --git a/pkgs/development/interpreters/eff/default.nix b/pkgs/development/interpreters/eff/default.nix index 28ea05066c23..258aebe81727 100644 --- a/pkgs/development/interpreters/eff/default.nix +++ b/pkgs/development/interpreters/eff/default.nix @@ -1,20 +1,21 @@ -{ stdenv, fetchgit, ocaml, findlib, ocamlbuild, menhir, which }: +{ stdenv, fetchFromGitHub, which, ocamlPackages }: -let inherit (stdenv.lib) getVersion versionAtLeast; in - -assert versionAtLeast (getVersion ocaml) "3.12"; +let version = "5.0"; in stdenv.mkDerivation { - name = "eff-20140928"; + name = "eff-${version}"; - src = fetchgit { - url = "https://github.com/matijapretnar/eff.git"; - rev = "90f884a790fddddb51d4d1d3b7c2edf1e8aabb64"; - sha256 = "0cqqrpvfw0nrk5d28mkzfvc8yzqxcss0k46bkmqhqjkqq886n2mm"; + src = fetchFromGitHub { + owner = "matijapretnar"; + repo = "eff"; + rev = "v${version}"; + sha256 = "1fslfj5d7fhj3f7kh558b8mk5wllwyq4rnhfkyd96fpy144sdcka"; }; - buildInputs = [ ocaml findlib ocamlbuild menhir which ]; + buildInputs = [ which ] ++ (with ocamlPackages; [ + ocaml findlib ocamlbuild menhir js_of_ocaml js_of_ocaml-ocamlbuild + ]); doCheck = true; checkTarget = "test"; @@ -29,7 +30,7 @@ stdenv.mkDerivation { backtracking, multi-threading, and much more... ''; license = licenses.bsd2; - platforms = ocaml.meta.platforms or []; + inherit (ocamlPackages.ocaml.meta) platforms; maintainers = [ maintainers.jirkamarsik ]; }; } diff --git a/pkgs/development/interpreters/erlang/R20.nix b/pkgs/development/interpreters/erlang/R20.nix index 7757039a4a15..42aaed0b6590 100644 --- a/pkgs/development/interpreters/erlang/R20.nix +++ b/pkgs/development/interpreters/erlang/R20.nix @@ -1,8 +1,8 @@ { mkDerivation, fetchurl }: mkDerivation rec { - version = "20.3.1"; - sha256 = "13qh3an98qm477zr1dvcklbhar001cikp177295llcqpchamgzx3"; + version = "20.3.2"; + sha256 = "0cd7rz32cxghxb2q7g3p52sxbhwqn4pkjlf28hy1dms6q7f85zv1"; prePatch = '' substituteInPlace configure.in --replace '`sw_vers -productVersion`' '10.10' diff --git a/pkgs/development/interpreters/j/default.nix b/pkgs/development/interpreters/j/default.nix index 698986e6b402..cb351446301d 100644 --- a/pkgs/development/interpreters/j/default.nix +++ b/pkgs/development/interpreters/j/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "j-${version}"; - version = "806"; + version = "808"; jtype = "release"; src = fetchFromGitHub { owner = "jsoftware"; repo = "jsource"; rev = "j${version}-${jtype}"; - sha256 = "0b9sbd5hbyr5454k0p53f03lpf03sz8mqwszaqi0vcs73bsprdjs"; + sha256 = "1sshm04p3yznlhfp6vyc7g8qxw95y67vhnh92cmz3lfy69n2q6bf"; }; buildInputs = [ readline libedit ]; diff --git a/pkgs/development/interpreters/perl/default.nix b/pkgs/development/interpreters/perl/default.nix index 0fd55bd8d71b..3541c92fd9d6 100644 --- a/pkgs/development/interpreters/perl/default.nix +++ b/pkgs/development/interpreters/perl/default.nix @@ -86,7 +86,7 @@ let preConfigure = optionalString (!crossCompiling) '' configureFlags="$configureFlags -Dprefix=$out -Dman1dir=$out/share/man/man1 -Dman3dir=$out/share/man/man3" - '' + optionalString (stdenv.isArm || stdenv.isMips) '' + '' + optionalString (stdenv.isAarch32 || stdenv.isMips) '' configureFlagsArray=(-Dldflags="-lm -lrt") '' + optionalString stdenv.isDarwin '' substituteInPlace hints/darwin.sh --replace "env MACOSX_DEPLOYMENT_TARGET=10.3" "" diff --git a/pkgs/development/interpreters/picolisp/default.nix b/pkgs/development/interpreters/picolisp/default.nix index 4618d0da9dd3..6f7f2df96bff 100644 --- a/pkgs/development/interpreters/picolisp/default.nix +++ b/pkgs/development/interpreters/picolisp/default.nix @@ -9,7 +9,7 @@ stdenv.mkDerivation rec { sha256 = "1k3x6mvk9b34iiyml142bzh3gf241f25ywjlaagbxzb9vklpws75"; }; buildInputs = optional stdenv.is64bit jdk; - patchPhase = optionalString stdenv.isArm '' + patchPhase = optionalString stdenv.isAarch32 '' sed -i s/-m32//g Makefile cat >>Makefile <<EOF ext.o: ext.c diff --git a/pkgs/development/interpreters/pure/default.nix b/pkgs/development/interpreters/pure/default.nix index 133329f4f203..c2b120576ea2 100644 --- a/pkgs/development/interpreters/pure/default.nix +++ b/pkgs/development/interpreters/pure/default.nix @@ -3,14 +3,12 @@ stdenv.mkDerivation rec { baseName="pure"; - project="pure-lang"; - version="0.66"; + version="0.68"; name="${baseName}-${version}"; - extension="tar.gz"; src = fetchurl { - url="https://bitbucket.org/purelang/${project}/downloads/${name}.${extension}"; - sha256="42df6832476e8bee3a7ca179671284c1edd7bc82b71062fa0de62fd2117ee676"; + url="https://github.com/agraef/pure-lang/releases/download/${name}/${name}.tar.gz"; + sha256="0px6x5ivcdbbp2pz5n1r1cwg1syadklhjw8piqhl63n91i4r7iyb"; }; buildInputs = [ bison flex makeWrapper ]; diff --git a/pkgs/development/interpreters/renpy/default.nix b/pkgs/development/interpreters/renpy/default.nix index 392b4bf36051..a992717d94f3 100644 --- a/pkgs/development/interpreters/renpy/default.nix +++ b/pkgs/development/interpreters/renpy/default.nix @@ -7,7 +7,7 @@ with pythonPackages; stdenv.mkDerivation rec { name = "renpy-${version}"; - version = "6.99.14.2"; + version = "6.99.14.3"; meta = with stdenv.lib; { description = "Ren'Py Visual Novel Engine"; @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://www.renpy.org/dl/${version}/renpy-${version}-source.tar.bz2"; - sha256 = "1cjaly5igks18lmmssph4d6b5q1b8qfav2s7x2agx1gybxyghv9n"; + sha256 = "15n29ybblcpnfbmhc31gm5vj7cpqd8cwrcqxlwnxy0gjpbc50x73"; }; patches = [ diff --git a/pkgs/development/interpreters/spidermonkey/1.8.5.nix b/pkgs/development/interpreters/spidermonkey/1.8.5.nix index 9a14beb856b6..8e51b9b7d58e 100644 --- a/pkgs/development/interpreters/spidermonkey/1.8.5.nix +++ b/pkgs/development/interpreters/spidermonkey/1.8.5.nix @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { propagatedBuildInputs = [ nspr ]; - nativeBuildInputs = [ pkgconfig ] ++ lib.optional stdenv.isArm autoconf213; + nativeBuildInputs = [ pkgconfig ] ++ lib.optional stdenv.isAarch32 autoconf213; buildInputs = [ perl python2 zip ]; postUnpack = "sourceRoot=\${sourceRoot}/js/src"; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { preConfigure = '' export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -I${nspr.dev}/include/nspr" export LIBXUL_DIST=$out - ${lib.optionalString stdenv.isArm "autoreconf --verbose --force"} + ${lib.optionalString stdenv.isAarch32 "autoreconf --verbose --force"} ''; patches = [ @@ -28,7 +28,7 @@ stdenv.mkDerivation rec { url = "https://anonscm.debian.org/cgit/collab-maint/mozjs.git/plain/debian/patches/fix-811665.patch?id=00b15c7841968ab4f7fec409a6b93fa5e1e1d32e"; sha256 = "1q8477xqxiy5d8376k5902l45gd0qkd4nxmhl8vr6rr1pxfcny99"; }) - ] ++ stdenv.lib.optionals stdenv.isArm [ + ] ++ stdenv.lib.optionals stdenv.isAarch32 [ # Explained below in configureFlags for ARM ./1.8.5-findvanilla.patch # Fix for hard float flags. @@ -50,7 +50,7 @@ stdenv.mkDerivation rec { # hack around a make problem, see https://github.com/NixOS/nixpkgs/issues/1279#issuecomment-29547393 preBuild = '' touch -- {.,shell,jsapi-tests}/{-lpthread,-ldl} - ${if stdenv.isArm then "rm -r jit-test/tests/jaeger/bug563000" else ""} + ${if stdenv.isAarch32 then "rm -r jit-test/tests/jaeger/bug563000" else ""} ''; enableParallelBuilding = true; diff --git a/pkgs/development/interpreters/supercollider/default.nix b/pkgs/development/interpreters/supercollider/default.nix index 2d3509542135..2737fd6fae04 100644 --- a/pkgs/development/interpreters/supercollider/default.nix +++ b/pkgs/development/interpreters/supercollider/default.nix @@ -9,12 +9,12 @@ in stdenv.mkDerivation rec { name = "supercollider-${version}"; - version = "3.9.2"; + version = "3.9.3"; src = fetchurl { url = "https://github.com/supercollider/supercollider/releases/download/Version-${version}/SuperCollider-${version}-Source-linux.tar.bz2"; - sha256 = "0d3cb6dw8jz7ijriqn3rlwin24gffczp69hl17pzxj1d5w57yj44"; + sha256 = "1d8ixfl100jvlialxdizp8wqsl1mp5pi2bam25vp97bhjd59cfdr"; }; hardeningDisable = [ "stackprotector" ]; diff --git a/pkgs/development/libraries/LASzip/default.nix b/pkgs/development/libraries/LASzip/default.nix index df9d126ad719..384178d2c8df 100644 --- a/pkgs/development/libraries/LASzip/default.nix +++ b/pkgs/development/libraries/LASzip/default.nix @@ -16,6 +16,6 @@ stdenv.mkDerivation rec { homepage = http://www.laszip.org; license = stdenv.lib.licenses.lgpl2; maintainers = [ stdenv.lib.maintainers.michelk ]; - platforms = stdenv.lib.platforms.linux; + platforms = stdenv.lib.platforms.unix; }; } diff --git a/pkgs/development/libraries/Xaw3d/default.nix b/pkgs/development/libraries/Xaw3d/default.nix index 93ebe9556592..f28ab55010b6 100644 --- a/pkgs/development/libraries/Xaw3d/default.nix +++ b/pkgs/development/libraries/Xaw3d/default.nix @@ -12,6 +12,6 @@ stdenv.mkDerivation { meta = { description = "3D widget set based on the Athena Widget set"; - platforms = stdenv.lib.platforms.linux; + platforms = stdenv.lib.platforms.unix; }; } diff --git a/pkgs/development/libraries/agda/pretty/default.nix b/pkgs/development/libraries/agda/pretty/default.nix index 25e6ff6667fe..0e4f1da6e140 100644 --- a/pkgs/development/libraries/agda/pretty/default.nix +++ b/pkgs/development/libraries/agda/pretty/default.nix @@ -21,5 +21,6 @@ agda.mkDerivation (self: rec { license = stdenv.lib.licenses.mit; platforms = stdenv.lib.platforms.unix; maintainers = with maintainers; [ fuuzetsu ]; + broken = true; # 2018-04-11 }; }) diff --git a/pkgs/development/libraries/agg/default.nix b/pkgs/development/libraries/agg/default.nix index c7f5ac866609..ab3098580950 100644 --- a/pkgs/development/libraries/agg/default.nix +++ b/pkgs/development/libraries/agg/default.nix @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { sh autogen.sh ''; - configureFlags = "--x-includes=${libX11.dev}/include --x-libraries=${libX11.out}/lib"; + configureFlags = "--x-includes=${libX11.dev}/include --x-libraries=${libX11.out}/lib --enable-examples=no"; # libtool --tag=CXX --mode=link g++ -g -O2 libexamples.la ../src/platform/X11/libaggplatformX11.la ../src/libagg.la -o alpha_mask2 alpha_mask2.o # libtool: error: cannot find the library 'libexamples.la' diff --git a/pkgs/development/libraries/appstream-glib/default.nix b/pkgs/development/libraries/appstream-glib/default.nix index 2499a424c85c..6ad6b158826f 100644 --- a/pkgs/development/libraries/appstream-glib/default.nix +++ b/pkgs/development/libraries/appstream-glib/default.nix @@ -4,7 +4,7 @@ , libuuid, json-glib, meson, gperf, ninja }: stdenv.mkDerivation rec { - name = "appstream-glib-0.7.7"; + name = "appstream-glib-0.7.8"; outputs = [ "out" "dev" "man" "installedTests" ]; outputBin = "dev"; @@ -13,7 +13,7 @@ stdenv.mkDerivation rec { owner = "hughsie"; repo = "appstream-glib"; rev = stdenv.lib.replaceStrings ["." "-"] ["_" "_"] name; - sha256 = "127m5ds355i1vfvmn9nd4zqqnqm16jpqcn4p2p2pvn7i4wqxra40"; + sha256 = "10hcl3sl3g8ajg9mssq3g4dbzz0d4b2ybimrcq71cpycqrqhilhx"; }; nativeBuildInputs = [ diff --git a/pkgs/development/libraries/arb/default.nix b/pkgs/development/libraries/arb/default.nix index c4b37ddb78fd..a59641e99d39 100644 --- a/pkgs/development/libraries/arb/default.nix +++ b/pkgs/development/libraries/arb/default.nix @@ -2,15 +2,21 @@ stdenv.mkDerivation rec { name = "${pname}-${version}"; pname = "arb"; - version = "2.8.1"; + version = "2.13.0"; src = fetchFromGitHub { owner = "fredrik-johansson"; repo = "${pname}"; rev = "${version}"; - sha256 = "15phk71ci9rr32aqznpkd2b993wjahsgliilkg4mnxsr86nwdf6x"; + sha256 = "1fl9gmxf6c1cphk5r8jbys5pywj2rfm705kv0055i0aqc6hrv303"; }; buildInputs = [mpir gmp mpfr flint]; - configureFlags = "--with-gmp=${gmp} --with-mpir=${mpir} --with-mpfr=${mpfr} --with-flint=${flint}"; + configureFlags = [ + "--with-gmp=${gmp}" + "--with-mpir=${mpir}" + "--with-mpfr=${mpfr}" + "--with-flint=${flint}" + ]; + doCheck = true; meta = { inherit version; description = ''A library for arbitrary-precision interval arithmetic''; diff --git a/pkgs/development/libraries/arguments/default.nix b/pkgs/development/libraries/arguments/default.nix new file mode 100644 index 000000000000..912ea53c3d3a --- /dev/null +++ b/pkgs/development/libraries/arguments/default.nix @@ -0,0 +1,32 @@ +{ stdenv, fetchFromGitHub, cmake, libminc, bicpl }: + +stdenv.mkDerivation rec { + pname = "arguments"; + name = "${pname}-2015-11-30"; + + owner = "BIC-MNI"; + + src = fetchFromGitHub { + inherit owner; + repo = pname; + rev = "b3aad97f6b6892cb8733455d0d448649a48fa108"; + sha256 = "1ar8lm1w1jflz3vdmjr5c4x6y7rscvrj78b8gmrv79y95qrgzv6s"; + }; + + nativeBuildInputs = [ cmake ]; + buildInputs = [ ]; + + #cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib" "-DBICPL_DIR=${bicpl}/lib" "-DBUILD_TESTING=FALSE" ]; + + checkPhase = "ctest --output-on-failure"; + doCheck = false; + # internal_volume_io.h: No such file or directory + + meta = with stdenv.lib; { + homepage = "https://github.com/${owner}/${pname}"; + description = "Library for argument handling for MINC programs"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.unix; + license = licenses.free; + }; +} diff --git a/pkgs/development/libraries/arrow-cpp/default.nix b/pkgs/development/libraries/arrow-cpp/default.nix new file mode 100644 index 000000000000..952f7435c069 --- /dev/null +++ b/pkgs/development/libraries/arrow-cpp/default.nix @@ -0,0 +1,44 @@ +{ stdenv, symlinkJoin, fetchurl, boost, brotli, cmake, flatbuffers, gtest, gflags, lz4, python, rapidjson, snappy, zlib, zstd }: + +stdenv.mkDerivation rec { + name = "arrow-cpp-${version}"; + version = "0.9.0"; + + src = fetchurl { + url = "mirror://apache/arrow/arrow-${version}/apache-arrow-${version}.tar.gz"; + sha256 = "16l91fixb5dgx3v6xc73ipn1w1hjgbmijyvs81j7ywzpna2cdcdy"; + }; + + sourceRoot = "apache-arrow-${version}/cpp"; + + nativeBuildInputs = [ cmake ]; + buildInputs = [ boost python.pkgs.python python.pkgs.numpy ]; + + preConfigure = '' + substituteInPlace cmake_modules/FindBrotli.cmake --replace CMAKE_STATIC_LIBRARY CMAKE_SHARED_LIBRARY + substituteInPlace cmake_modules/FindLz4.cmake --replace CMAKE_STATIC_LIBRARY CMAKE_SHARED_LIBRARY + substituteInPlace cmake_modules/FindSnappy.cmake --replace CMAKE_STATIC_LIBRARY CMAKE_SHARED_LIBRARY + ''; + + BROTLI_HOME = symlinkJoin { name="brotli-wrap"; paths = [ brotli.lib brotli.dev ]; }; + FLATBUFFERS_HOME = flatbuffers; + GTEST_HOME = gtest; + GFLAGS_HOME = gflags; + LZ4_HOME = symlinkJoin { name="lz4-wrap"; paths = [ lz4 lz4.dev ]; }; + RAPIDJSON_HOME = rapidjson; + SNAPPY_HOME = symlinkJoin { name="snappy-wrap"; paths = [ snappy snappy.dev ]; }; + ZLIB_HOME = symlinkJoin { name="zlib-wrap"; paths = [ zlib.dev zlib.static ]; }; + ZSTD_HOME = zstd; + + cmakeFlags = [ + "-DARROW_PYTHON=ON" + ]; + + meta = { + description = "A cross-language development platform for in-memory data"; + homepage = https://arrow.apache.org/; + license = stdenv.lib.licenses.asl20; + platforms = stdenv.lib.platforms.unix; + maintainers = with stdenv.lib.maintainers; [ veprbl ]; + }; +} diff --git a/pkgs/development/libraries/asio/default.nix b/pkgs/development/libraries/asio/default.nix index ad601359019e..1126b4a7f2c9 100644 --- a/pkgs/development/libraries/asio/default.nix +++ b/pkgs/development/libraries/asio/default.nix @@ -1,11 +1,11 @@ {stdenv, fetchurl, boost, openssl}: stdenv.mkDerivation rec { - name = "asio-1.12.0"; + name = "asio-1.12.1"; src = fetchurl { url = "mirror://sourceforge/asio/${name}.tar.bz2"; - sha256 = "1bfk746kcs3cmvfvxjp3w9y6zpybjj8s002jjd3snrp2syd0nd9c"; + sha256 = "0nln45662kg799ykvqx5m9z9qcsmadmgg6r5najryls7x16in2d9"; }; propagatedBuildInputs = [ boost ]; diff --git a/pkgs/development/libraries/audio/jamomacore/default.nix b/pkgs/development/libraries/audio/jamomacore/default.nix index 7057b020d429..4e316ff1c991 100644 --- a/pkgs/development/libraries/audio/jamomacore/default.nix +++ b/pkgs/development/libraries/audio/jamomacore/default.nix @@ -20,5 +20,6 @@ stdenv.mkDerivation rec { license = stdenv.lib.licenses.bsd3; maintainers = [ stdenv.lib.maintainers.magnetophon ]; platforms = stdenv.lib.platforms.linux; + broken = true; # 2018-04-10 }; } diff --git a/pkgs/development/libraries/aws-sdk-cpp/default.nix b/pkgs/development/libraries/aws-sdk-cpp/default.nix index 11005d6097af..0ab102a5ec43 100644 --- a/pkgs/development/libraries/aws-sdk-cpp/default.nix +++ b/pkgs/development/libraries/aws-sdk-cpp/default.nix @@ -15,13 +15,13 @@ let else throw "Unsupported system!"; in stdenv.mkDerivation rec { name = "aws-sdk-cpp-${version}"; - version = "1.4.24"; + version = "1.4.33"; src = fetchFromGitHub { owner = "awslabs"; repo = "aws-sdk-cpp"; rev = version; - sha256 = "1prkivapmzjcsykxj42h0p27kjhc66hir0h2j6rz0yqdfr4pyhgl"; + sha256 = "0fl4m3vsycd35gkrrlqsjlv0myh12bgb0jg3pm548l19qwrc0pm7"; }; # FIXME: might be nice to put different APIs in different outputs diff --git a/pkgs/development/libraries/caf/default.nix b/pkgs/development/libraries/caf/default.nix index d3b6722b36cd..1e764aff4cc1 100644 --- a/pkgs/development/libraries/caf/default.nix +++ b/pkgs/development/libraries/caf/default.nix @@ -2,25 +2,17 @@ stdenv.mkDerivation rec { name = "actor-framework-${version}"; - version = "0.15.3"; + version = "0.15.7"; src = fetchFromGitHub { owner = "actor-framework"; repo = "actor-framework"; rev = "${version}"; - sha256 = "0202nsdriigdh6sxi1k3hddvmf1x54qpykbvf2ghfhzyh0m1q7j2"; + sha256 = "0qmb18k162xdvf8z03mybjazkwb2vqda5xd1qh5bwkvxracwq3sb"; }; - # See https://github.com/actor-framework/actor-framework/issues/545 and remove on next release that incorporates this - patches = [ (fetchpatch { - url = "https://github.com/actor-framework/actor-framework/commit/c5a3ee26a6e76b28dd4226f35230b280f291386d.patch"; - sha256 = "1l0323cqyqlp3lvggm709fmfm6lk6av1smdbd420adhi3ksj2vhj"; - }) ]; - nativeBuildInputs = [ cmake ]; - enableParallelBuilding = true; - meta = with stdenv.lib; { description = "An open source implementation of the actor model in C++"; homepage = http://actor-framework.org/; diff --git a/pkgs/development/libraries/cyrus-sasl/default.nix b/pkgs/development/libraries/cyrus-sasl/default.nix index 68398e93764c..7a9e3991aadb 100644 --- a/pkgs/development/libraries/cyrus-sasl/default.nix +++ b/pkgs/development/libraries/cyrus-sasl/default.nix @@ -22,7 +22,8 @@ stdenv.mkDerivation rec { patches = [ ./missing-size_t.patch # https://bugzilla.redhat.com/show_bug.cgi?id=906519 - (fetchpatch { # CVE-2013-4122 + (fetchpatch { + name = "CVE-2013-4122.patch"; url = "http://sourceforge.net/projects/miscellaneouspa/files/glibc217/cyrus-sasl-2.1.26-glibc217-crypt.diff"; sha256 = "05l7dh1w9d5fvzg0pjwzqh0fy4ah8y5cv6v67s4ssbq8xwd4pkf2"; }) diff --git a/pkgs/development/libraries/easyloggingpp/default.nix b/pkgs/development/libraries/easyloggingpp/default.nix index 89a34a988906..8c6337cfaf60 100644 --- a/pkgs/development/libraries/easyloggingpp/default.nix +++ b/pkgs/development/libraries/easyloggingpp/default.nix @@ -4,12 +4,12 @@ { stdenv, fetchFromGitHub, cmake, gtest }: stdenv.mkDerivation rec { name = "easyloggingpp-${version}"; - version = "9.96.2"; + version = "9.96.4"; src = fetchFromGitHub { owner = "muflihun"; repo = "easyloggingpp"; rev = "v${version}"; - sha256 = "0qhf93i2ks9v6rk6n4v3fn7xrkqdwgs6rm6wd0gx9sm2wlq4ancd"; + sha256 = "0l0b8cssxkj0wlfqjj8hfnfvrjcxa81h947d54w86iadrilrsprb"; }; nativeBuildInputs = [cmake]; diff --git a/pkgs/development/libraries/eclib/default.nix b/pkgs/development/libraries/eclib/default.nix index 3651b9e7660e..dbe487368dc5 100644 --- a/pkgs/development/libraries/eclib/default.nix +++ b/pkgs/development/libraries/eclib/default.nix @@ -1,21 +1,44 @@ -{stdenv, fetchFromGitHub, autoconf, automake, libtool, gettext, autoreconfHook -, pari, ntl, gmp}: +{ stdenv +, fetchFromGitHub +, autoreconfHook +, libtool +, gettext +, pari +, ntl +, gmp +# "FLINT is optional and only used for one part of sparse matrix reduction, +# which is used in the modular symbol code but not mwrank or other elliptic +# curve programs." -- https://github.com/JohnCremona/eclib/blob/master/README +, withFlint ? false, flint ? null +}: + +assert withFlint -> flint != null; + stdenv.mkDerivation rec { name = "${pname}-${version}"; pname = "eclib"; - version = "20160720"; - # or fetchFromGitHub(owner,repo,rev) or fetchgit(rev) + version = "20171002"; src = fetchFromGitHub { owner = "JohnCremona"; repo = "${pname}"; - rev = "${version}"; - sha256 = "0qrcd5c8cqhw9f14my6k6013w8li5vdigrjvchkr19n2l8g75j0h"; + rev = "v${version}"; + sha256 = "092an90405q9da0k0z5jfp5rng9jl0mqbvsbv4fx6jc9ykfcahsj"; }; - buildInputs = [pari ntl gmp]; - nativeBuildInputs = [autoconf automake libtool gettext autoreconfHook]; + buildInputs = [ + pari + ntl + gmp + ] ++ stdenv.lib.optionals withFlint [ + flint + ]; + nativeBuildInputs = [ + autoreconfHook + ]; + doCheck = true; meta = { inherit version; description = ''Elliptic curve tools''; + homepage = https://github.com/JohnCremona/eclib; license = stdenv.lib.licenses.gpl2Plus; maintainers = [stdenv.lib.maintainers.raskin]; platforms = stdenv.lib.platforms.linux; diff --git a/pkgs/development/libraries/farbfeld/default.nix b/pkgs/development/libraries/farbfeld/default.nix index 7c0addea5e8b..c23fc0bc59f6 100644 --- a/pkgs/development/libraries/farbfeld/default.nix +++ b/pkgs/development/libraries/farbfeld/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchgit, libpng, libjpeg }: +{ stdenv, fetchgit, makeWrapper, file, libpng, libjpeg }: stdenv.mkDerivation rec { name = "farbfeld-${version}"; @@ -11,8 +11,12 @@ stdenv.mkDerivation rec { }; buildInputs = [ libpng libjpeg ]; + nativeBuildInputs = [ makeWrapper ]; installFlags = "PREFIX=/ DESTDIR=$(out)"; + postInstall = '' + wrapProgram "$out/bin/2ff" --prefix PATH : "${file}/bin" + ''; meta = with stdenv.lib; { description = "Suckless image format with conversion tools"; diff --git a/pkgs/development/libraries/fflas-ffpack/default.nix b/pkgs/development/libraries/fflas-ffpack/default.nix index edea352ae2dd..5f99f35a1599 100644 --- a/pkgs/development/libraries/fflas-ffpack/default.nix +++ b/pkgs/development/libraries/fflas-ffpack/default.nix @@ -1,4 +1,7 @@ -{stdenv, fetchFromGitHub, autoreconfHook, givaro, pkgconfig, openblas, liblapack}: +{ stdenv, fetchFromGitHub, autoreconfHook, givaro, pkgconfig, openblas +, gmpxx +, optimize ? false # impure +}: stdenv.mkDerivation rec { name = "${pname}-${version}"; pname = "fflas-ffpack"; @@ -9,9 +12,31 @@ stdenv.mkDerivation rec { rev = "v${version}"; sha256 = "1cqhassj2dny3gx0iywvmnpq8ca0d6m82xl5rz4mb8gaxr2kwddl"; }; - nativeBuildInputs = [ autoreconfHook pkgconfig ]; - buildInputs = [ givaro (liblapack.override {shared = true;}) openblas]; - configureFlags = "--with-blas-libs=-lopenblas --with-lapack-libs=-llapack"; + checkInputs = [ + gmpxx + ]; + nativeBuildInputs = [ + autoreconfHook + pkgconfig + ] ++ stdenv.lib.optionals doCheck checkInputs; + buildInputs = [ givaro openblas]; + configureFlags = [ + "--with-blas-libs=-lopenblas" + "--with-lapack-libs=-lopenblas" + ] ++ stdenv.lib.optionals (!optimize) [ + # disable SIMD instructions (which are enabled *when available* by default) + "--disable-sse" + "--disable-sse2" + "--disable-sse3" + "--disable-ssse3" + "--disable-sse41" + "--disable-sse42" + "--disable-avx" + "--disable-avx2" + "--disable-fma" + "--disable-fma4" + ]; + doCheck = true; meta = { inherit version; description = ''Finite Field Linear Algebra Subroutines''; diff --git a/pkgs/development/libraries/ffmpeg-full/default.nix b/pkgs/development/libraries/ffmpeg-full/default.nix index 67e364715f09..db39be465485 100644 --- a/pkgs/development/libraries/ffmpeg-full/default.nix +++ b/pkgs/development/libraries/ffmpeg-full/default.nix @@ -119,7 +119,7 @@ #, utvideo ? null # Ut Video de/encoder , vid-stab ? null # Video stabilization #, vo-aacenc ? null # AAC encoder -#, vo-amrwbenc ? null # AMR-WB encoder +, vo-amrwbenc ? null # AMR-WB encoder , wavpack ? null # Wavpack encoder , x264 ? null # H.264/AVC encoder , x265 ? null # H.265/HEVC encoder @@ -380,7 +380,7 @@ stdenv.mkDerivation rec { #(enableFeature (utvideo != null && gplLicensing) "libutvideo") (enableFeature (vid-stab != null && gplLicensing) "libvidstab") # Actual min. version 2.0 #(enableFeature (vo-aacenc != null && version3Licensing) "libvo-aacenc") - #(enableFeature (vo-amrwbenc != null && version3Licensing) "libvo-amrwbenc") + (enableFeature (vo-amrwbenc != null && version3Licensing) "libvo-amrwbenc") (enableFeature (wavpack != null) "libwavpack") (enableFeature (x264 != null && gplLicensing) "libx264") (enableFeature (x265 != null && gplLicensing) "libx265") @@ -405,7 +405,8 @@ stdenv.mkDerivation rec { libjack2 ladspaH lame libass libbluray libbs2b libcaca libdc1394 libmodplug libogg libopus libssh libtheora libvdpau libvorbis libvpx libwebp libX11 libxcb libXv lzma openal openjpeg_1 libpulseaudio rtmpdump opencore-amr - samba SDL2 soxr speex vid-stab wavpack x264 x265 xavs xvidcore zeromq4 zlib + samba SDL2 soxr speex vid-stab vo-amrwbenc wavpack x264 x265 xavs xvidcore + zeromq4 zlib ] ++ optional openglExtlib libGLU_combined ++ optionals nonfreeLicensing [ fdk_aac openssl ] ++ optional ((isLinux || isFreeBSD) && libva != null) libva diff --git a/pkgs/development/libraries/ffmpeg/generic.nix b/pkgs/development/libraries/ffmpeg/generic.nix index 985f328a22dd..4a05eab87bd7 100644 --- a/pkgs/development/libraries/ffmpeg/generic.nix +++ b/pkgs/development/libraries/ffmpeg/generic.nix @@ -7,8 +7,8 @@ # Build options , runtimeCpuDetectBuild ? true # Detect CPU capabilities at runtime , multithreadBuild ? true # Multithreading via pthreads/win32 threads -, sdlSupport ? !stdenv.isArm, SDL ? null, SDL2 ? null -, vdpauSupport ? !stdenv.isArm, libvdpau ? null +, sdlSupport ? !stdenv.isAarch32, SDL ? null, SDL2 ? null +, vdpauSupport ? !stdenv.isAarch32, libvdpau ? null # Developer options , debugDeveloper ? false , optimizationsDeveloper ? true @@ -42,7 +42,7 @@ */ let - inherit (stdenv) icCygwin isDarwin isFreeBSD isLinux isArm; + inherit (stdenv) icCygwin isDarwin isFreeBSD isLinux isAarch32; inherit (stdenv.lib) optional optionals enableFeature; cmpVer = builtins.compareVersions; @@ -55,9 +55,9 @@ let verFix = withoutFix: fixVer: withFix: if reqMatch fixVer then withFix else withoutFix; # Disable dependency that needs fixes before it will work on Darwin or Arm - disDarwinOrArmFix = origArg: minVer: fixArg: if ((isDarwin || isArm) && reqMin minVer) then fixArg else origArg; + disDarwinOrArmFix = origArg: minVer: fixArg: if ((isDarwin || isAarch32) && reqMin minVer) then fixArg else origArg; - vaapiSupport = reqMin "0.6" && ((isLinux || isFreeBSD) && !isArm); + vaapiSupport = reqMin "0.6" && ((isLinux || isFreeBSD) && !isAarch32); in assert openglSupport -> libGLU_combined != null; @@ -153,8 +153,8 @@ stdenv.mkDerivation rec { bzip2 fontconfig freetype gnutls libiconv lame libass libogg libtheora libvdpau libvorbis lzma soxr x264 x265 xvidcore zlib libopus ] ++ optional openglSupport libGLU_combined - ++ optionals (!isDarwin && !isArm) [ libvpx libpulseaudio ] # Need to be fixed on Darwin and ARM - ++ optional ((isLinux || isFreeBSD) && !isArm) libva + ++ optionals (!isDarwin && !isAarch32) [ libvpx libpulseaudio ] # Need to be fixed on Darwin and ARM + ++ optional ((isLinux || isFreeBSD) && !isAarch32) libva ++ optional isLinux alsaLib ++ optionals isDarwin darwinFrameworks ++ optional vdpauSupport libvdpau diff --git a/pkgs/development/libraries/folly/default.nix b/pkgs/development/libraries/folly/default.nix index c4dc57300446..d3ba4b889094 100644 --- a/pkgs/development/libraries/folly/default.nix +++ b/pkgs/development/libraries/folly/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "folly-${version}"; - version = "2018.03.26.00"; + version = "2018.04.16.00"; src = fetchFromGitHub { owner = "facebook"; repo = "folly"; rev = "v${version}"; - sha256 = "137d9b9k2m02r8f2w31qj3gc18hpm5g51bcl60g6vzdqzwzizzyr"; + sha256 = "10wivnszpqcbg2hbvfal94lcjw20pjz0d8p0m4qa7i4v4z90q37p"; }; nativeBuildInputs = [ autoreconfHook python pkgconfig ]; diff --git a/pkgs/development/libraries/fox/fox-1.6.nix b/pkgs/development/libraries/fox/fox-1.6.nix index a0ba95480129..4f1e0eaee7fb 100644 --- a/pkgs/development/libraries/fox/fox-1.6.nix +++ b/pkgs/development/libraries/fox/fox-1.6.nix @@ -3,7 +3,7 @@ , CoreServices }: let - version = "1.6.56"; + version = "1.6.57"; in stdenv.mkDerivation rec { @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "ftp://ftp.fox-toolkit.org/pub/${name}.tar.gz"; - sha256 = "1ckcb12gblz1ad1371ah1qirxn3r9zdngh9w0357hsqfmkyfa5y5"; + sha256 = "08w98m6wjadraw1pi13igzagly4b2nfa57kdqdnkjfhgkvg1bvv5"; }; buildInputs = [ diff --git a/pkgs/development/libraries/fplll/default.nix b/pkgs/development/libraries/fplll/default.nix index b377061fe97e..2dd757bf8216 100644 --- a/pkgs/development/libraries/fplll/default.nix +++ b/pkgs/development/libraries/fplll/default.nix @@ -4,12 +4,12 @@ stdenv.mkDerivation rec { name = "${pname}-${version}"; pname = "fplll"; - version = "5.0.2"; + version = "5.2.0"; src = fetchFromGitHub { owner = "${pname}"; repo = "${pname}"; rev = "${version}"; - sha256 = "0rl98rx284giyhj3pf6iydn1a06jis8c8mnsc7kqs4rcmiw4bjpx"; + sha256 = "0931i4q49lzlifsg9zd8a2yzj626i1s2bqhkfxvcxv94c38s0nh1"; }; nativeBuildInputs = [autoconf automake libtool gettext autoreconfHook]; buildInputs = [gmp mpfr]; diff --git a/pkgs/development/libraries/freetype/default.nix b/pkgs/development/libraries/freetype/default.nix index 3fccce02def4..4d2455d4872b 100644 --- a/pkgs/development/libraries/freetype/default.nix +++ b/pkgs/development/libraries/freetype/default.nix @@ -52,7 +52,7 @@ in stdenv.mkDerivation rec { configureFlags = [ "--disable-static" "--bindir=$(dev)/bin" ]; # The asm for armel is written with the 'asm' keyword. - CFLAGS = optionalString stdenv.isArm "-std=gnu99"; + CFLAGS = optionalString stdenv.isAarch32 "-std=gnu99"; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/gdcm/default.nix b/pkgs/development/libraries/gdcm/default.nix index 47f9e9c66760..dcdb6a2297b2 100644 --- a/pkgs/development/libraries/gdcm/default.nix +++ b/pkgs/development/libraries/gdcm/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, cmake, vtk }: stdenv.mkDerivation rec { - version = "2.8.5"; + version = "2.8.6"; name = "gdcm-${version}"; src = fetchurl { url = "mirror://sourceforge/gdcm/${name}.tar.bz2"; - sha256 = "0aiwmxwa67zsb2sbadf8r2p9018qhc8gycb04kfrsf7rskz3x2h5"; + sha256 = "07q7w2qvpknvncp3g6m5f6b3m1ld4pzns52bqah8da7pabgwspjy"; }; dontUseCmakeBuildDir = true; diff --git a/pkgs/development/libraries/gegl/3.0.nix b/pkgs/development/libraries/gegl/3.0.nix index fee630c32a81..161153b7e3dc 100644 --- a/pkgs/development/libraries/gegl/3.0.nix +++ b/pkgs/development/libraries/gegl/3.0.nix @@ -3,11 +3,11 @@ , libwebp, gnome3, libintl }: stdenv.mkDerivation rec { - name = "gegl-0.3.30"; + name = "gegl-0.3.34"; src = fetchurl { url = "http://download.gimp.org/pub/gegl/0.3/${name}.tar.bz2"; - sha256 = "0lg5j5kn24qvyb6fn7khxf3jadkacbpnb9nrqzy7w665s8xakd7q"; + sha256 = "010k86wn8cmr07rqwa4lccrmiiqrwbnkxvic4lpapwgbamv258jw"; }; hardeningDisable = [ "format" ]; diff --git a/pkgs/development/libraries/geos/default.nix b/pkgs/development/libraries/geos/default.nix index de7111f6be36..24e3b4842faf 100644 --- a/pkgs/development/libraries/geos/default.nix +++ b/pkgs/development/libraries/geos/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, fetchpatch, python }: stdenv.mkDerivation rec { - name = "geos-3.6.1"; + name = "geos-3.6.2"; src = fetchurl { url = "http://download.osgeo.org/geos/${name}.tar.bz2"; - sha256 = "1icz31kd5sml2kdxhjznvmv33zfr6nig9l0i6bdcz9q9g8x4wbja"; + sha256 = "0ak5szby29l9l0vy43dm5z2g92xzdky20q1gc1kah1fnhkgi6nh4"; }; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/gflags/default.nix b/pkgs/development/libraries/gflags/default.nix deleted file mode 100644 index f9fc4366b7e4..000000000000 --- a/pkgs/development/libraries/gflags/default.nix +++ /dev/null @@ -1,19 +0,0 @@ -{ stdenv, fetchurl, cmake }: - -stdenv.mkDerivation - { name = "gflags-2.2.1"; - src = fetchurl - { url = "https://github.com/gflags/gflags/archive/v2.2.1.tar.gz"; - sha256 = "03lxc2ah8i392kh1naq99iip34k4fpv22kwflyx3byd2ssycs9xf"; - }; - nativeBuildInputs = [ cmake ]; - # for case-insensitive filesystems - prePatch = "mv BUILD BUILD.bazel"; - - meta = with stdenv.lib; { - description = "C++ library that implements commandline flags processing"; - homepage = "https://github.com/gflags/gflags"; - license = licenses.bsd3; - platforms = platforms.unix; - }; - } diff --git a/pkgs/development/libraries/glbinding/default.nix b/pkgs/development/libraries/glbinding/default.nix new file mode 100644 index 000000000000..339e0d8d60b9 --- /dev/null +++ b/pkgs/development/libraries/glbinding/default.nix @@ -0,0 +1,22 @@ +{ stdenv, fetchFromGitHub, cmake, libGLU, xlibsWrapper }: +stdenv.mkDerivation rec { + name = "${pname}-${version}"; + pname = "glbinding"; + version = "2.1.4"; + + src = fetchFromGitHub { + owner = "cginternals"; + repo = pname; + rev = "v${version}"; + sha256 = "1yic3p2iqzxc7wrjnqclx7vcaaqx5fiysq9rqbi6v390jqkg3zlz"; + }; + + buildInputs = [ cmake libGLU xlibsWrapper ]; + + meta = with stdenv.lib; { + homepage = https://github.com/cginternals/glbinding/; + description = "A C++ binding for the OpenGL API, generated using the gl.xml specification"; + license = licenses.mit; + maintainers = [ maintainers.mt-caret ]; + }; +} diff --git a/pkgs/development/libraries/glew/default.nix b/pkgs/development/libraries/glew/default.nix index eebf4dded4ad..a8add880090f 100644 --- a/pkgs/development/libraries/glew/default.nix +++ b/pkgs/development/libraries/glew/default.nix @@ -5,11 +5,11 @@ with stdenv.lib; stdenv.mkDerivation rec { - name = "glew-2.0.0"; + name = "glew-2.1.0"; src = fetchurl { url = "mirror://sourceforge/glew/${name}.tgz"; - sha256 = "0r37fg2s1f0jrvwh6c8cz5x6v4wqmhq42qm15cs9qs349q5c6wn5"; + sha256 = "159wk5dc0ykjbxvag5i1m2mhp23zkk6ra04l26y3jc3nwvkr3ph4"; }; outputs = [ "bin" "out" "dev" "doc" ]; diff --git a/pkgs/development/libraries/glibc/common.nix b/pkgs/development/libraries/glibc/common.nix index 517c98e9f644..37e0a20a957d 100644 --- a/pkgs/development/libraries/glibc/common.nix +++ b/pkgs/development/libraries/glibc/common.nix @@ -1,5 +1,21 @@ /* Build configuration used to build glibc, Info files, and locale - information. */ + information. + + Note that this derivation has multiple outputs and does not respect the + standard convention of putting the executables into the first output. The + first output is `lib` so that the libraries provided by this derivation + can be accessed directly, e.g. + + "${pkgs.glibc}/lib/ld-linux-x86_64.so.2" + + The executables are put into `bin` output and need to be referenced via + the `bin` attribute of the main package, e.g. + + "${pkgs.glibc.bin}/bin/ldd". + + The executables provided by glibc typically include `ldd`, `locale`, `iconv` + but the exact set depends on the library version and the configuration. +*/ { stdenv, lib , buildPlatform, hostPlatform @@ -79,12 +95,7 @@ stdenv.mkDerivation ({ ./allow-kernel-2.6.32.patch ] ++ lib.optional stdenv.isx86_64 ./fix-x64-abi.patch - ++ lib.optional stdenv.hostPlatform.isMusl - (fetchpatch { - name = "fix-with-musl.patch"; - url = "https://sourceware.org/bugzilla/attachment.cgi?id=10151&action=diff&collapsed=&headers=1&format=raw"; - sha256 = "18kk534k6da5bkbsy1ivbi77iin76lsna168mfcbwv4ik5vpziq2"; - }); + ++ lib.optional stdenv.hostPlatform.isMusl ./fix-rpc-types-musl-conflicts.patch; postPatch = '' @@ -116,7 +127,7 @@ stdenv.mkDerivation ({ (if cross ? float && cross.float == "soft" then "--without-fp" else "--with-fp") ] ++ lib.optionals (cross != null) [ "--with-__thread" - ] ++ lib.optionals (cross == null && stdenv.isArm) [ + ] ++ lib.optionals (cross == null && stdenv.isAarch32) [ "--host=arm-linux-gnueabi" "--build=arm-linux-gnueabi" diff --git a/pkgs/development/libraries/glibc/fix-rpc-types-musl-conflicts.patch b/pkgs/development/libraries/glibc/fix-rpc-types-musl-conflicts.patch new file mode 100644 index 000000000000..19f8bfc7cce8 --- /dev/null +++ b/pkgs/development/libraries/glibc/fix-rpc-types-musl-conflicts.patch @@ -0,0 +1,38 @@ +@@ -, +, @@ +--- + sunrpc/rpc/types.h | 22 ++++++---------------- + 1 file changed, 6 insertions(+), 16 deletions(-) +--- a/sunrpc/rpc/types.h ++++ a/sunrpc/rpc/types.h +@@ -69,24 +69,14 @@ typedef unsigned long rpcport_t; + #include <sys/types.h> + #endif + +-#if defined __APPLE_CC__ || defined __FreeBSD__ +-# define __u_char_defined +-# define __daddr_t_defined +-#endif +- +-#ifndef __u_char_defined +-typedef __u_char u_char; +-typedef __u_short u_short; +-typedef __u_int u_int; +-typedef __u_long u_long; +-typedef __quad_t quad_t; +-typedef __u_quad_t u_quad_t; +-typedef __fsid_t fsid_t; ++/* IMPORTANT NOTE: This has been modified to build against the musl C ++ * library and it probably now ONLY builds with the musl C library. ++ * ++ * See: https://sourceware.org/bugzilla/show_bug.cgi?id=21604 ++ */ + # define __u_char_defined +-#endif + #ifndef __daddr_t_defined +-typedef __daddr_t daddr_t; +-typedef __caddr_t caddr_t; ++typedef int daddr_t; + # define __daddr_t_defined + #endif + +-- diff --git a/pkgs/development/libraries/glibmm/default.nix b/pkgs/development/libraries/glibmm/default.nix index a3af96d51edc..3c3b49e66161 100644 --- a/pkgs/development/libraries/glibmm/default.nix +++ b/pkgs/development/libraries/glibmm/default.nix @@ -1,19 +1,27 @@ -{ stdenv, fetchurl, pkgconfig, gnum4, glib, libsigcxx }: +{ stdenv, fetchurl, fetchpatch, pkgconfig, gnum4, glib, libsigcxx }: let - ver_maj = "2.54"; - ver_min = "1"; + ver_maj = "2.56"; + ver_min = "0"; in stdenv.mkDerivation rec { name = "glibmm-${ver_maj}.${ver_min}"; src = fetchurl { url = "mirror://gnome/sources/glibmm/${ver_maj}/${name}.tar.xz"; - sha256 = "0jkapw18icz59cmlmsl00nwwz0wh291kb4hc9z9hxmq45drqrhkw"; + sha256 = "1abrkqhca5p8n6ly3vp1232rny03s7lrd8f8iz2m2m141nxgqx3f"; }; outputs = [ "out" "dev" ]; + patchFlags = "-p0"; + patches = [ + (fetchpatch { + url = "https://raw.githubusercontent.com/macports/macports-ports/e864b2340be9ef003d8ff4aef92e7151d06287dd/devel/glibmm/files/0001-ustring-Fix-wchar-conversion-on-macOS-with-libc.patch"; + sha256 = "02qvnailw1i59cjbj3cy7y02kfcivsvkdjrf4njkp4plarayyqp9"; + }) + ]; + nativeBuildInputs = [ pkgconfig gnum4 ]; propagatedBuildInputs = [ glib libsigcxx ]; diff --git a/pkgs/development/libraries/glpk/default.nix b/pkgs/development/libraries/glpk/default.nix index b9634e01900e..5b9296608d45 100644 --- a/pkgs/development/libraries/glpk/default.nix +++ b/pkgs/development/libraries/glpk/default.nix @@ -1,13 +1,33 @@ -{ fetchurl, stdenv }: +{ stdenv +, fetchurl +# Excerpt from glpk's INSTALL file: +# This feature allows the exact simplex solver to use the GNU MP +# bignum library. If it is disabled, the exact simplex solver uses the +# GLPK bignum module, which provides the same functionality as GNU MP, +# however, it is much less efficient. +, withGmp ? true +, gmp +}: + +assert withGmp -> gmp != null; stdenv.mkDerivation rec { - name = "glpk-4.65"; + version = "4.65"; + name = "glpk-${version}"; src = fetchurl { url = "mirror://gnu/glpk/${name}.tar.gz"; sha256 = "040sfaa9jclg2nqdh83w71sv9rc1sznpnfiripjdyr48cady50a2"; }; + buildInputs = stdenv.lib.optionals withGmp [ + gmp + ]; + + configureFlags = stdenv.lib.optionals withGmp [ + "--with-gmp" + ]; + doCheck = true; meta = { @@ -23,7 +43,7 @@ stdenv.mkDerivation rec { homepage = http://www.gnu.org/software/glpk/; license = stdenv.lib.licenses.gpl3Plus; - maintainers = [ stdenv.lib.maintainers.bjg ]; + maintainers = with stdenv.lib.maintainers; [ bjg ]; platforms = stdenv.lib.platforms.all; }; } diff --git a/pkgs/development/libraries/gmime/3.nix b/pkgs/development/libraries/gmime/3.nix index 66d0cf88bd02..124fc08cf3bd 100644 --- a/pkgs/development/libraries/gmime/3.nix +++ b/pkgs/development/libraries/gmime/3.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, pkgconfig, glib, zlib, gpgme, libidn, gobjectIntrospection }: stdenv.mkDerivation rec { - version = "3.0.5"; + version = "3.2.0"; name = "gmime-${version}"; src = fetchurl { - url = "mirror://gnome/sources/gmime/3.0/${name}.tar.xz"; - sha256 = "1q45gd1ahnz9q1milc2lqqwl7j3q0wd6kiswhp25iak222n56lrg"; + url = "mirror://gnome/sources/gmime/3.2/${name}.tar.xz"; + sha256 = "1q6palbpf6lh6bvy9ly26q5apl5k0z0r4mvl6zzqh90rz4rn1v3m"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/development/libraries/gmp/5.1.x.nix b/pkgs/development/libraries/gmp/5.1.x.nix index b65a8ee5fc1c..57204776decd 100644 --- a/pkgs/development/libraries/gmp/5.1.x.nix +++ b/pkgs/development/libraries/gmp/5.1.x.nix @@ -37,7 +37,7 @@ let self = stdenv.mkDerivation rec { # The config.guess in GMP tries to runtime-detect various # ARM optimization flags via /proc/cpuinfo (and is also # broken on multicore CPUs). Avoid this impurity. - preConfigure = optionalString stdenv.isArm '' + preConfigure = optionalString stdenv.isAarch32 '' configureFlagsArray+=("--build=$(./configfsf.guess)") ''; diff --git a/pkgs/development/libraries/gmp/6.x.nix b/pkgs/development/libraries/gmp/6.x.nix index 5973c89cef79..551e7e5e1f6b 100644 --- a/pkgs/development/libraries/gmp/6.x.nix +++ b/pkgs/development/libraries/gmp/6.x.nix @@ -38,7 +38,7 @@ let self = stdenv.mkDerivation rec { # The config.guess in GMP tries to runtime-detect various # ARM optimization flags via /proc/cpuinfo (and is also # broken on multicore CPUs). Avoid this impurity. - preConfigure = optionalString stdenv.isArm '' + preConfigure = optionalString stdenv.isAarch32 '' configureFlagsArray+=("--build=$(./configfsf.guess)") ''; diff --git a/pkgs/development/libraries/gnu-efi/default.nix b/pkgs/development/libraries/gnu-efi/default.nix index 940b4e2aee4e..1f8a518d69e4 100644 --- a/pkgs/development/libraries/gnu-efi/default.nix +++ b/pkgs/development/libraries/gnu-efi/default.nix @@ -21,7 +21,7 @@ stdenv.mkDerivation rec { "AR=${stdenv.cc.targetPrefix}ar" "RANLIB=${stdenv.cc.targetPrefix}ranlib" "OBJCOPY=${stdenv.cc.targetPrefix}objcopy" - ] ++ stdenv.lib.optional stdenv.isArm "ARCH=arm" + ] ++ stdenv.lib.optional stdenv.isAarch32 "ARCH=arm" ++ stdenv.lib.optional stdenv.isAarch64 "ARCH=aarch64"; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/google-gflags/default.nix b/pkgs/development/libraries/google-gflags/default.nix index 1a3a16587274..dbcb0342156b 100644 --- a/pkgs/development/libraries/google-gflags/default.nix +++ b/pkgs/development/libraries/google-gflags/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "google-gflags-${version}"; - version = "2.2.0"; + version = "2.2.1"; src = fetchFromGitHub { owner = "gflags"; repo = "gflags"; rev = "v${version}"; - sha256 = "1y5808ky8qhjwv1nf134czz0h2p2faqvjhxa9zxf8mg8hn4ns9wp"; + sha256 = "12wkihc4f07qmhyqk3cjylj8v5xz2bjrq75p7aq1vvvj60fbp58k"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/gpgme/default.nix b/pkgs/development/libraries/gpgme/default.nix index 68762e344bdb..94c09b716832 100644 --- a/pkgs/development/libraries/gpgme/default.nix +++ b/pkgs/development/libraries/gpgme/default.nix @@ -11,11 +11,11 @@ let inherit (stdenv) lib system; in stdenv.mkDerivation rec { name = "gpgme-${version}"; - version = "1.10.0"; + version = "1.11.1"; src = fetchurl { url = "mirror://gnupg/gpgme/${name}.tar.bz2"; - sha256 = "14q619lxbk64vz7lih5gjb928qm28jrnn1h3yhsrrff3jw8yv3qs"; + sha256 = "0vxx5xaag3rhp4g2arp5qm77gvz4kj0m3hnpvhkdvqyjfhbi26rd"; }; outputs = [ "out" "dev" "info" ]; diff --git a/pkgs/development/libraries/gssdp/default.nix b/pkgs/development/libraries/gssdp/default.nix index 55e20065732c..d48ba9082af2 100644 --- a/pkgs/development/libraries/gssdp/default.nix +++ b/pkgs/development/libraries/gssdp/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "gssdp-${version}"; - version = "1.0.1"; + version = "1.0.2"; src = fetchurl { url = "mirror://gnome/sources/gssdp/1.0/${name}.tar.xz"; - sha256 = "1qfj4gir1qf6v86z70ryzmjb75ns30q6zi5p89vhd3621gs6f7b0"; + sha256 = "1p1m2m3ndzr2whipqw4vfb6s6ia0g7rnzzc4pnq8b8g1qw4prqd1"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/gstreamer/bad/default.nix b/pkgs/development/libraries/gstreamer/bad/default.nix index 73cbaa0f8070..8ebd70921135 100644 --- a/pkgs/development/libraries/gstreamer/bad/default.nix +++ b/pkgs/development/libraries/gstreamer/bad/default.nix @@ -35,6 +35,7 @@ stdenv.mkDerivation rec { ''; license = licenses.lgpl2Plus; platforms = platforms.linux ++ platforms.darwin; + maintainers = with maintainers; [ matthewbauer ]; }; preConfigure = '' diff --git a/pkgs/development/libraries/gstreamer/base/default.nix b/pkgs/development/libraries/gstreamer/base/default.nix index b3a4f445289e..39cf57ec5258 100644 --- a/pkgs/development/libraries/gstreamer/base/default.nix +++ b/pkgs/development/libraries/gstreamer/base/default.nix @@ -1,17 +1,22 @@ -{ stdenv, fetchurl, fetchpatch, pkgconfig, meson -, ninja, gettext, gobjectIntrospection, python -, gstreamer, orc, alsaLib, libXv, pango, libtheora -, wayland, cdparanoia, libvisual, libintl -}: +{ stdenv, fetchurl, fetchpatch, lib +, pkgconfig, meson, ninja, gettext, gobjectIntrospection +, python, gstreamer, orc, pango, libtheora, libvisual +, libintl +, enableX11 ? stdenv.isLinux, libXv +, enableWayland ? stdenv.isLinux, wayland +, enableAlsa ? stdenv.isLinux, alsaLib +, enableCocoa ? false, darwin +, enableCdparanoia ? (!stdenv.isDarwin), cdparanoia }: stdenv.mkDerivation rec { name = "gst-plugins-base-1.14.0"; - meta = { + meta = with lib; { description = "Base plugins and helper libraries"; homepage = https://gstreamer.freedesktop.org; - license = stdenv.lib.licenses.lgpl2Plus; - platforms = stdenv.lib.platforms.unix; + license = licenses.lgpl2Plus; + platforms = platforms.unix; + maintainers = with maintainers; [ matthewbauer ]; }; src = fetchurl { @@ -21,19 +26,32 @@ stdenv.mkDerivation rec { outputs = [ "out" "dev" ]; - nativeBuildInputs = [ - pkgconfig python meson ninja gettext gobjectIntrospection - ]; + nativeBuildInputs = [ pkgconfig python gettext gobjectIntrospection ] + + # Broken meson with Darwin. Should hopefully be fixed soon. Tracking + # in https://bugzilla.gnome.org/show_bug.cgi?id=781148. + ++ lib.optionals (!stdenv.isDarwin) [ meson ninja ]; - buildInputs = [ - orc libXv pango libtheora cdparanoia libintl wayland + # TODO How to pass these to Meson? + configureFlags = [ + "--enable-x11=${if enableX11 then "yes" else "no"}" + "--enable-wayland=${if enableWayland then "yes" else "no"}" + "--enable-cocoa=${if enableCocoa then "yes" else "no"}" ] - ++ stdenv.lib.optional stdenv.isLinux alsaLib - ++ stdenv.lib.optional (!stdenv.isDarwin) libvisual; + + # Introspection fails on my MacBook currently + ++ lib.optional stdenv.isDarwin "--disable-introspection"; + + buildInputs = [ orc libtheora libintl ] + ++ lib.optional enableAlsa alsaLib + ++ lib.optionals enableX11 [ libXv pango ] + ++ lib.optional enableWayland wayland + ++ lib.optional enableCocoa darwin.apple_sdk.frameworks.Cocoa + ++ lib.optional enableCdparanoia cdparanoia; propagatedBuildInputs = [ gstreamer ]; - preConfigure = '' + postPatch = '' patchShebangs . ''; diff --git a/pkgs/development/libraries/gstreamer/core/default.nix b/pkgs/development/libraries/gstreamer/core/default.nix index ab3f78767a1c..5845c8c50db2 100644 --- a/pkgs/development/libraries/gstreamer/core/default.nix +++ b/pkgs/development/libraries/gstreamer/core/default.nix @@ -2,17 +2,18 @@ , pkgconfig, gettext, gobjectIntrospection , bison, flex, python3, glib, makeWrapper , libcap,libunwind, darwin +, lib }: stdenv.mkDerivation rec { name = "gstreamer-1.14.0"; - meta = { + meta = with lib ;{ description = "Open source multimedia framework"; homepage = https://gstreamer.freedesktop.org; - license = stdenv.lib.licenses.lgpl2Plus; - platforms = stdenv.lib.platforms.unix; - maintainers = [ stdenv.lib.maintainers.ttuegel ]; + license = licenses.lgpl2Plus; + platforms = platforms.unix; + maintainers = with maintainers; [ ttuegel matthewbauer ]; }; src = fetchurl { @@ -20,7 +21,7 @@ stdenv.mkDerivation rec { sha256 = "0vj6k01lp2yva6rfd95fkyng9jdr62gkz0x8d2l81dyly1ki6dpw"; }; - patches = [ + patches = [ (fetchpatch { url = "https://bug794856.bugzilla-attachments.gnome.org/attachment.cgi?id=370411"; sha256 = "16plzzmkk906k4892zq68j3c9z8vdma5nxzlviq20jfv04ykhmk2"; @@ -34,7 +35,9 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ meson ninja pkgconfig gettext bison flex python3 makeWrapper gobjectIntrospection ]; - buildInputs = [ libcap libunwind ] ++ stdenv.lib.optional stdenv.isDarwin darwin.apple_sdk.frameworks.CoreServices; + buildInputs = + lib.optionals stdenv.isLinux [ libcap libunwind ] + ++ lib.optional stdenv.isDarwin darwin.apple_sdk.frameworks.CoreServices; propagatedBuildInputs = [ glib ]; diff --git a/pkgs/development/libraries/gstreamer/good/default.nix b/pkgs/development/libraries/gstreamer/good/default.nix index 5c10221b27d7..21376ce79c1c 100644 --- a/pkgs/development/libraries/gstreamer/good/default.nix +++ b/pkgs/development/libraries/gstreamer/good/default.nix @@ -6,6 +6,7 @@ , libsoup, libpulseaudio, libintl , darwin, lame, mpg123, twolame , gtkSupport ? false, gtk3 ? null +, ncurses }: assert gtkSupport -> gtk3 != null; @@ -26,6 +27,7 @@ stdenv.mkDerivation rec { ''; license = licenses.lgpl2Plus; platforms = platforms.linux ++ platforms.darwin; + maintainers = with maintainers; [ matthewbauer ]; }; src = fetchurl { @@ -39,11 +41,14 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig python meson ninja gettext ]; + NIX_LDFLAGS = "-lncurses"; + buildInputs = [ gst-plugins-base orc bzip2 libdv libvpx speex flac taglib cairo gdk_pixbuf aalib libcaca libsoup libshout lame mpg123 twolame libintl + ncurses ] ++ optionals stdenv.isDarwin [ darwin.apple_sdk.frameworks.Cocoa ] ++ optionals stdenv.isLinux [ libv4l libpulseaudio libavc1394 libiec61883 ]; diff --git a/pkgs/development/libraries/gstreamer/ugly/default.nix b/pkgs/development/libraries/gstreamer/ugly/default.nix index a5449abb9f7d..004bb0715f26 100644 --- a/pkgs/development/libraries/gstreamer/ugly/default.nix +++ b/pkgs/development/libraries/gstreamer/ugly/default.nix @@ -1,13 +1,14 @@ { stdenv, fetchurl, meson, ninja, pkgconfig, python , gst-plugins-base, orc, gettext , a52dec, libcdio, libdvdread -, libmad, libmpeg2, x264, libintl +, libmad, libmpeg2, x264, libintl, lib +, darwin }: stdenv.mkDerivation rec { name = "gst-plugins-ugly-1.14.0"; - meta = with stdenv.lib; { + meta = with lib; { description = "Gstreamer Ugly Plugins"; homepage = "https://gstreamer.freedesktop.org"; longDescription = '' @@ -18,6 +19,7 @@ stdenv.mkDerivation rec { ''; license = licenses.lgpl2Plus; platforms = platforms.unix; + maintainers = with maintainers; [ matthewbauer ]; }; src = fetchurl { @@ -34,5 +36,6 @@ stdenv.mkDerivation rec { a52dec libcdio libdvdread libmad libmpeg2 x264 libintl - ]; + ] ++ lib.optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; + [ IOKit CoreFoundation DiskArbitration ]); } diff --git a/pkgs/development/libraries/gvfs/default.nix b/pkgs/development/libraries/gvfs/default.nix index 67837b345c00..238edddaf3ad 100644 --- a/pkgs/development/libraries/gvfs/default.nix +++ b/pkgs/development/libraries/gvfs/default.nix @@ -18,14 +18,14 @@ let pname = "gvfs"; - version = "1.36.0"; + version = "1.36.1"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "1fsn6aa9a68cfbna9s00l1ry4ym1fr7ii2f45hzj2fipxfpqihwy"; + sha256 = "09phj9kqk8lzcmkjfq7qmzpkj4xp1vg4mskv6d2s9j62hvrxyh1q"; }; # Uncomment when switching back to meson diff --git a/pkgs/development/libraries/hamlib/default.nix b/pkgs/development/libraries/hamlib/default.nix index 3ea70fd49908..9825d6ed64a9 100644 --- a/pkgs/development/libraries/hamlib/default.nix +++ b/pkgs/development/libraries/hamlib/default.nix @@ -3,12 +3,12 @@ stdenv.mkDerivation rec { pname = "hamlib"; - version = "1.2.15.3"; + version = "3.2"; name = "${pname}-${version}"; src = fetchurl { url = "mirror://sourceforge/${pname}/${name}.tar.gz"; - sha256 = "0ppp6fc2h9d8p30j2s9wlqd620kmnny4wd8fc3jxd6gxwi4lbjm2"; + sha256 = "07ddsykbliiv0p717z1h5vzmvsx6lm75j32rhvmwqxp8m3kbap5m"; }; buildInputs = [ perl perlPackages.ExtUtilsMakeMaker python2 swig gd libxml2 diff --git a/pkgs/development/libraries/hunspell/dictionaries.nix b/pkgs/development/libraries/hunspell/dictionaries.nix index f30ec1872bae..ee8a5107b341 100644 --- a/pkgs/development/libraries/hunspell/dictionaries.nix +++ b/pkgs/development/libraries/hunspell/dictionaries.nix @@ -61,6 +61,51 @@ let ''; }; + mkDictFromDSSO = + { shortName, shortDescription, dictFileName }: + mkDict rec { + inherit dictFileName; + version = "2.40"; + # Should really use a string function or something + _version = "2-40"; + name = "hunspell-dict-${shortName}-dsso-${version}"; + _name = "ooo_swedish_dict_${_version}"; + readmeFile = "LICENSE_en_US.txt"; + src = fetchurl { + url = "https://extensions.libreoffice.org/extensions/swedish-spelling-dictionary-den-stora-svenska-ordlistan/${version}/@@download/file/${_name}.oxt"; + sha256 = "b982881cc75f5c4af1199535bd4735ee476bdc48edf63e3f05fb4f715654a7bc"; + }; + meta = with stdenv.lib; { + longDescription = '' + Svensk ordlista baserad på DSSO (den stora svenska ordlistan) och Göran + Anderssons (goran@init.se) arbete med denna. Ordlistan hämtas från + LibreOffice då dsso.se inte längre verkar vara med oss. + ''; + description = "Hunspell dictionary for ${shortDescription} from LibreOffice"; + license = licenses.lgpl3; + platforms = platforms.all; + }; + buildInputs = [ unzip ]; + phases = "unpackPhase installPhase"; + sourceRoot = "."; + unpackCmd = '' + unzip $src dictionaries/${dictFileName}.dic dictionaries/${dictFileName}.aff $readmeFile + ''; + installPhase = '' + # hunspell dicts + install -dm755 "$out/share/hunspell" + install -m644 dictionaries/${dictFileName}.dic "$out/share/hunspell/" + install -m644 dictionaries/${dictFileName}.aff "$out/share/hunspell/" + # myspell dicts symlinks + install -dm755 "$out/share/myspell/dicts" + ln -sv "$out/share/hunspell/${dictFileName}.dic" "$out/share/myspell/dicts/" + ln -sv "$out/share/hunspell/${dictFileName}.aff" "$out/share/myspell/dicts/" + # docs + install -dm755 "$out/share/doc" + install -m644 ${readmeFile} $out/share/doc/${name}.txt + ''; + }; + mkDictFromDicollecte = { shortName, shortDescription, longDescription, dictFileName }: mkDict rec { @@ -464,6 +509,21 @@ in { ]; }; + /* SWEDISH */ + + sv-se = mkDictFromDSSO rec { + shortName = "sv-se"; + dictFileName = "sv_SE"; + shortDescription = "Swedish (Sweden)"; + }; + + # Finlandian Swedish (hello Linus Torvalds) + sv-fi = mkDictFromDSSO rec { + shortName = "sv-fi"; + dictFileName = "sv_FI"; + shortDescription = "Swedish (Finland)"; + }; + /* GERMAN */ de-de = mkDictFromJ3e { diff --git a/pkgs/development/libraries/icu/base.nix b/pkgs/development/libraries/icu/base.nix index 87551ee6ee03..ee868d371ce5 100644 --- a/pkgs/development/libraries/icu/base.nix +++ b/pkgs/development/libraries/icu/base.nix @@ -31,7 +31,7 @@ let # $(includedir) is different from $(prefix)/include due to multiple outputs sed -i -e 's|^\(CPPFLAGS = .*\) -I\$(prefix)/include|\1 -I$(includedir)|' config/Makefile.inc.in - '' + stdenv.lib.optionalString stdenv.isArm '' + '' + stdenv.lib.optionalString stdenv.isAarch32 '' # From https://archlinuxarm.org/packages/armv7h/icu/files/icudata-stdlibs.patch sed -e 's/LDFLAGSICUDT=-nodefaultlibs -nostdlib/LDFLAGSICUDT=/' -i config/mh-linux ''; diff --git a/pkgs/development/libraries/ignition-transport/generic.nix b/pkgs/development/libraries/ignition-transport/generic.nix index 639af2dd2089..3568edb7890c 100644 --- a/pkgs/development/libraries/ignition-transport/generic.nix +++ b/pkgs/development/libraries/ignition-transport/generic.nix @@ -26,5 +26,6 @@ stdenv.mkDerivation rec { license = licenses.asl20; maintainers = with maintainers; [ pxc ]; platforms = platforms.all; + broken = true; # 2018-04-10 }; } diff --git a/pkgs/development/libraries/itk/default.nix b/pkgs/development/libraries/itk/default.nix index 10c160eacc6e..5280a95afb40 100644 --- a/pkgs/development/libraries/itk/default.nix +++ b/pkgs/development/libraries/itk/default.nix @@ -12,7 +12,9 @@ stdenv.mkDerivation rec { "-DBUILD_TESTING=OFF" "-DBUILD_EXAMPLES=OFF" "-DBUILD_SHARED_LIBS=ON" + "-DModule_ITKMINC=ON" "-DModule_ITKIOMINC=ON" + "-DModule_ITKIOTransformMINC=ON" "-DModule_ITKVtkGlue=ON" "-DModule_ITKReview=ON" ]; diff --git a/pkgs/development/libraries/jasper/default.nix b/pkgs/development/libraries/jasper/default.nix index af543c4e1976..d374c935a2a4 100644 --- a/pkgs/development/libraries/jasper/default.nix +++ b/pkgs/development/libraries/jasper/default.nix @@ -11,6 +11,15 @@ stdenv.mkDerivation rec { sha256 = "0aarg8nbik9wrm7fx0451sbm5ypfdfr6i169pxzi354mpdp8gg7f"; }; + patches = [ + (fetchpatch { + name = "CVE-2018-9055.patch"; + url = "http://paste.opensuse.org/view/raw/330751ce"; + sha256 = "0m798m6c4v9yyhql7x684j5kppcm6884n1rrb9ljz8p9aqq2jqnm"; + }) + ]; + + # newer reconf to recognize a multiout flag nativeBuildInputs = [ cmake ]; propagatedBuildInputs = [ libjpeg ]; diff --git a/pkgs/development/libraries/java/hsqldb/default.nix b/pkgs/development/libraries/java/hsqldb/default.nix index ad849a4d6d53..97ffcb647d62 100644 --- a/pkgs/development/libraries/java/hsqldb/default.nix +++ b/pkgs/development/libraries/java/hsqldb/default.nix @@ -2,12 +2,12 @@ }: stdenv.mkDerivation { - name = "hsqldb-1.8.0.9"; + name = "hsqldb-2.4.0"; builder = ./builder.sh; src = fetchurl { url = mirror://sourceforge/hsqldb/hsqldb_1_8_0_9.zip; - sha256 = "e98d1d8bca15059f4ef4f0d3dde2d75778a5e1bbe8bc12abd4ec2cac39d5adec"; + sha256 = "1v5dslwsqb7csjmi5g78pghsay2pszidvlzhyi79y18mra5iv3g9"; }; buildInputs = [ unzip diff --git a/pkgs/development/libraries/jemalloc/common.nix b/pkgs/development/libraries/jemalloc/common.nix new file mode 100644 index 000000000000..d8866ae3ff89 --- /dev/null +++ b/pkgs/development/libraries/jemalloc/common.nix @@ -0,0 +1,35 @@ +{ stdenv, fetchurl, version, sha256, ... }@args: + +stdenv.mkDerivation (rec { + name = "jemalloc-${version}"; + inherit version; + + src = fetchurl { + url = "https://github.com/jemalloc/jemalloc/releases/download/${version}/${name}.tar.bz2"; + inherit sha256; + }; + + # By default, jemalloc puts a je_ prefix onto all its symbols on OSX, which + # then stops downstream builds (mariadb in particular) from detecting it. This + # option should remove the prefix and give us a working jemalloc. + configureFlags = stdenv.lib.optional stdenv.isDarwin "--with-jemalloc-prefix=" + # jemalloc is unable to correctly detect transparent hugepage support on + # ARM (https://github.com/jemalloc/jemalloc/issues/526), and the default + # kernel ARMv6/7 kernel does not enable it, so we explicitly disable support + ++ stdenv.lib.optional stdenv.isAarch32 "--disable-thp"; + doCheck = true; + + enableParallelBuilding = true; + + meta = with stdenv.lib; { + homepage = http://jemalloc.net; + description = "General purpose malloc(3) implementation"; + longDescription = '' + malloc(3)-compatible memory allocator that emphasizes fragmentation + avoidance and scalable concurrency support. + ''; + license = licenses.bsd2; + platforms = platforms.all; + maintainers = with maintainers; [ wkennington ]; + }; +} // (builtins.removeAttrs args [ "stdenv" "fetchurl" "version" "sha256" ])) diff --git a/pkgs/development/libraries/jemalloc/default.nix b/pkgs/development/libraries/jemalloc/default.nix index 0882431cc15b..40c06cbffdf0 100644 --- a/pkgs/development/libraries/jemalloc/default.nix +++ b/pkgs/development/libraries/jemalloc/default.nix @@ -1,40 +1,10 @@ { stdenv, fetchurl, fetchpatch }: - -stdenv.mkDerivation rec { - name = "jemalloc-${version}"; +import ./common.nix { + inherit stdenv fetchurl; version = "5.0.1"; - - src = fetchurl { - url = "https://github.com/jemalloc/jemalloc/releases/download/${version}/${name}.tar.bz2"; - sha256 = "4814781d395b0ef093b21a08e8e6e0bd3dab8762f9935bbfb71679b0dea7c3e9"; - }; - - # By default, jemalloc puts a je_ prefix onto all its symbols on OSX, which - # then stops downstream builds (mariadb in particular) from detecting it. This - # option should remove the prefix and give us a working jemalloc. - configureFlags = stdenv.lib.optional stdenv.isDarwin "--with-jemalloc-prefix=" - # jemalloc is unable to correctly detect transparent hugepage support on - # ARM (https://github.com/jemalloc/jemalloc/issues/526), and the default - # kernel ARMv6/7 kernel does not enable it, so we explicitly disable support - ++ stdenv.lib.optional stdenv.isArm "--disable-thp"; - doCheck = true; - + sha256 = "4814781d395b0ef093b21a08e8e6e0bd3dab8762f9935bbfb71679b0dea7c3e9"; patches = stdenv.lib.optional stdenv.isAarch64 (fetchpatch { url = "https://patch-diff.githubusercontent.com/raw/jemalloc/jemalloc/pull/1035.patch"; sha256 = "02y0q3dp253bipxv4r954nqipbjbj92p6ww9bx5bk3d8pa81wkqq"; }); - - enableParallelBuilding = true; - - meta = with stdenv.lib; { - homepage = http://jemalloc.net; - description = "General purpose malloc(3) implementation"; - longDescription = '' - malloc(3)-compatible memory allocator that emphasizes fragmentation - avoidance and scalable concurrency support. - ''; - license = licenses.bsd2; - platforms = platforms.all; - maintainers = with maintainers; [ wkennington ]; - }; } diff --git a/pkgs/development/libraries/jemalloc/jemalloc450.nix b/pkgs/development/libraries/jemalloc/jemalloc450.nix new file mode 100644 index 000000000000..00b38a855532 --- /dev/null +++ b/pkgs/development/libraries/jemalloc/jemalloc450.nix @@ -0,0 +1,6 @@ +{ stdenv, fetchurl }: +import ./common.nix { + inherit stdenv fetchurl; + version = "4.5.0"; + sha256 = "10373xhpc10pgmai9fkc1z0rs029qlcb3c0qfnvkbwdlcibdh2cl"; +} diff --git a/pkgs/development/libraries/kdb/default.nix b/pkgs/development/libraries/kdb/default.nix index e85190cdfcec..1dedd3836c29 100644 --- a/pkgs/development/libraries/kdb/default.nix +++ b/pkgs/development/libraries/kdb/default.nix @@ -6,12 +6,12 @@ mkDerivation rec { pname = "kdb"; - version = "3.0.2"; + version = "3.1.0"; name = "${pname}-${version}"; src = fetchurl { url = "mirror://kde/stable/${pname}/src/${name}.tar.xz"; - sha256 = "1n11xhqk3sf4a5nzvnrnj7bj21yqqqkm2d1xzfx3q82fkyah8s49"; + sha256 = "1wi9z7j0nr9wi6aqqkdcpnr38ixyxbv00sblya7pakdf96hlamhp"; }; nativeBuildInputs = [ extra-cmake-modules ]; diff --git a/pkgs/development/libraries/kde-frameworks/default.nix b/pkgs/development/libraries/kde-frameworks/default.nix index 08eebfd83aee..f54139836b1d 100644 --- a/pkgs/development/libraries/kde-frameworks/default.nix +++ b/pkgs/development/libraries/kde-frameworks/default.nix @@ -129,6 +129,7 @@ let syntax-highlighting = callPackage ./syntax-highlighting.nix {}; threadweaver = callPackage ./threadweaver.nix {}; kirigami2 = callPackage ./kirigami2.nix {}; + kholidays = callPackage ./kholidays.nix {}; # TIER 2 kactivities = callPackage ./kactivities.nix {}; diff --git a/pkgs/development/libraries/kde-frameworks/fetch.sh b/pkgs/development/libraries/kde-frameworks/fetch.sh index 85a49ce6b6cd..ede76323347e 100644 --- a/pkgs/development/libraries/kde-frameworks/fetch.sh +++ b/pkgs/development/libraries/kde-frameworks/fetch.sh @@ -1 +1 @@ -WGET_ARGS=( https://download.kde.org/stable/frameworks/5.44/ -A '*.tar.xz' ) +WGET_ARGS=( https://download.kde.org/stable/frameworks/5.45/ -A '*.tar.xz' ) diff --git a/pkgs/applications/kde/kholidays.nix b/pkgs/development/libraries/kde-frameworks/kholidays.nix index 352bec094922..2ede69e74953 100644 --- a/pkgs/applications/kde/kholidays.nix +++ b/pkgs/development/libraries/kde-frameworks/kholidays.nix @@ -1,5 +1,5 @@ { - mkDerivation, lib, kdepimTeam, + mkDerivation, lib, extra-cmake-modules, kdoctools, qtbase, qtdeclarative, qttools, }: @@ -8,7 +8,7 @@ mkDerivation { name = "kholidays"; meta = { license = with lib.licenses; [ gpl2 lgpl21 fdl12 ]; - maintainers = kdepimTeam; + maintainers = with lib.maintainers; [ bkchr ]; }; nativeBuildInputs = [ extra-cmake-modules kdoctools ]; buildInputs = [ qtbase qtdeclarative qttools ]; diff --git a/pkgs/development/libraries/kde-frameworks/ki18n.nix b/pkgs/development/libraries/kde-frameworks/ki18n.nix index 3b9ca74bbd07..ee7d13af5b1e 100644 --- a/pkgs/development/libraries/kde-frameworks/ki18n.nix +++ b/pkgs/development/libraries/kde-frameworks/ki18n.nix @@ -1,5 +1,5 @@ { - mkDerivation, lib, + mkDerivation, lib, fetchpatch, extra-cmake-modules, gettext, python, qtbase, qtdeclarative, qtscript, }: @@ -13,4 +13,10 @@ mkDerivation { nativeBuildInputs = [ extra-cmake-modules ]; propagatedNativeBuildInputs = [ gettext python ]; buildInputs = [ qtdeclarative qtscript ]; + patches = [ + (fetchpatch { + url = "https://phabricator.kde.org/D12216?download=true"; + sha256 = "04gpyb11vlgivqjx3lqdwgqb4ss5bphy5zmh65k57bbv4rnlsm15"; + }) + ]; } diff --git a/pkgs/development/libraries/kde-frameworks/srcs.nix b/pkgs/development/libraries/kde-frameworks/srcs.nix index 84cbbe798fc1..8e2187f29574 100644 --- a/pkgs/development/libraries/kde-frameworks/srcs.nix +++ b/pkgs/development/libraries/kde-frameworks/srcs.nix @@ -3,627 +3,627 @@ { attica = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/attica-5.44.0.tar.xz"; - sha256 = "1ac2k3rc5dd5sc9n8qdb1d6jssjpag709sfsnvif1cvp0j8s2xj3"; - name = "attica-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/attica-5.45.0.tar.xz"; + sha256 = "1vzbajj2ldhg26ssxh0vkahj7fw5v9nhrv000vbxlhsrcczq81n5"; + name = "attica-5.45.0.tar.xz"; }; }; baloo = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/baloo-5.44.0.tar.xz"; - sha256 = "0ybxl05njryk7zrdcwh4gbvxbn7n6xb51y2587d9bxiizasmbbiy"; - name = "baloo-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/baloo-5.45.0.tar.xz"; + sha256 = "0zr2pg946q3wc6bhsbngpmca0ylhw8ckfdrs6ym36v7xz3h5fhds"; + name = "baloo-5.45.0.tar.xz"; }; }; bluez-qt = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/bluez-qt-5.44.0.tar.xz"; - sha256 = "054zh3hc7wq13iks3nryzdns61wb56j2cvvfvsnv3yl9ni6i6wxv"; - name = "bluez-qt-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/bluez-qt-5.45.0.tar.xz"; + sha256 = "056xl29yf7bkqrn655c9b2wdx69021q7cz176rx4daid70i8nx49"; + name = "bluez-qt-5.45.0.tar.xz"; }; }; breeze-icons = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/breeze-icons-5.44.0.tar.xz"; - sha256 = "05ndqmprwv4dd8aib3sjmvd5481znq4jg58cpk4id1xxq4dgx9gg"; - name = "breeze-icons-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/breeze-icons-5.45.0.tar.xz"; + sha256 = "0nzi4wy0p7lkb76nynmwbgnrsrfbhfxn3269mkbqwakq6i4mxsj8"; + name = "breeze-icons-5.45.0.tar.xz"; }; }; extra-cmake-modules = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/extra-cmake-modules-5.44.0.tar.xz"; - sha256 = "121gwj54f7bns386wrw6rwqmwzsny93mb00sxxzf3ic8m6mw6wis"; - name = "extra-cmake-modules-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/extra-cmake-modules-5.45.0.tar.xz"; + sha256 = "0g7njdz6bqjcswq100mb2jr4l1mdicqq24wdw3a8f63syg5rvm76"; + name = "extra-cmake-modules-5.45.0.tar.xz"; }; }; frameworkintegration = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/frameworkintegration-5.44.0.tar.xz"; - sha256 = "10rqabchldra16zb0ryynvjimc67di3r4b29fbn47wg4pwj0jn41"; - name = "frameworkintegration-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/frameworkintegration-5.45.0.tar.xz"; + sha256 = "0s300vp674rq2dinhjjsp7v4gmv6ybxsk1r3asv3x789zwz1lr3i"; + name = "frameworkintegration-5.45.0.tar.xz"; }; }; kactivities = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/kactivities-5.44.0.tar.xz"; 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+ version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/modemmanager-qt-5.44.0.tar.xz"; - sha256 = "1dkbyn6y605i8xqwqvpxmspp0fh7zarc0h54k30rnvv1g9rs1dd4"; - name = "modemmanager-qt-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/modemmanager-qt-5.45.0.tar.xz"; + sha256 = "16qdvy19q5pjk82amn3mncwgvk3g2qrbdzl9wpfxhqcny18xbwdd"; + name = "modemmanager-qt-5.45.0.tar.xz"; }; }; networkmanager-qt = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/networkmanager-qt-5.44.0.tar.xz"; - sha256 = "0bhsminn31b8w1678im5zqixmyx1m5275szca9hh7wx6dl0sxhlw"; - name = "networkmanager-qt-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/networkmanager-qt-5.45.0.tar.xz"; + sha256 = "00ipzc92v229bz9vv6kga37qhpcnqrxn2h47v9n5myfr1p6acgw0"; + name = "networkmanager-qt-5.45.0.tar.xz"; }; }; oxygen-icons5 = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/oxygen-icons5-5.44.0.tar.xz"; - sha256 = "0ymd9s26x2ryyw851y4yb2wl9f3syzfp0z08387h90jg6xk36si5"; - name = "oxygen-icons5-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/oxygen-icons5-5.45.0.tar.xz"; + sha256 = "1va0296118x7apb7idjf0qjx5f0flamspmzicc03znbh4hx1fxyc"; + name = "oxygen-icons5-5.45.0.tar.xz"; }; }; plasma-framework = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/plasma-framework-5.44.0.tar.xz"; - sha256 = "1lfrmrgamizfkr9jmfmf3afis0z40r1chpk854pqfr4p27j4gdmz"; - name = "plasma-framework-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/plasma-framework-5.45.0.tar.xz"; + sha256 = "1db8pyq1bdkswi59aihaqgas3xzzlfsfd9yn34g4q00gzc17ird5"; + name = "plasma-framework-5.45.0.tar.xz"; }; }; prison = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/prison-5.44.0.tar.xz"; - sha256 = "0glcifwjm50kn6fk3lvwpslmh4s6s8g5r7h208dw56n19yhpkrfm"; - name = "prison-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/prison-5.45.0.tar.xz"; + sha256 = "1g6rnyx84sz28cf427y9yp0lcbdhrlgx4ns80jz34gyzcgi4bxi0"; + name = "prison-5.45.0.tar.xz"; }; }; purpose = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/purpose-5.44.0.tar.xz"; - sha256 = "1scc2vbb5ws70kvicaay634ghgp2c7xhm7d907b36jj9gvyp4d2f"; - name = "purpose-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/purpose-5.45.0.tar.xz"; + sha256 = "0mfx2gl78w2wwkykl0zch88i7d10zq5cm2xqwxjfpkpdjwb7pflb"; + name = "purpose-5.45.0.tar.xz"; }; }; qqc2-desktop-style = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/qqc2-desktop-style-5.44.0.tar.xz"; - sha256 = "02s22xncpy988fbyjj17j5saamaf8q0sll4gd2s5xsswmalvnb51"; - name = "qqc2-desktop-style-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/qqc2-desktop-style-5.45.0.tar.xz"; + sha256 = "1dc20wkh2cfyhd7wkg1v1b5f6asz70m8ksml6r5hzs807sdqvrsa"; + name = "qqc2-desktop-style-5.45.0.tar.xz"; }; }; solid = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/solid-5.44.0.tar.xz"; - sha256 = "08xw54m5srjr5n1h689hd05ld7ssimwvhlb9dlpxdavkag1vbqq1"; - name = "solid-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/solid-5.45.0.tar.xz"; + sha256 = "175hsj2hdsdnz4wkg1l56275390nn1kjpwcyb7ryzzqabn7hdqmd"; + name = "solid-5.45.0.tar.xz"; }; }; sonnet = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/sonnet-5.44.0.tar.xz"; - sha256 = "1dip8h9frxvzy39cjc205y2szdpczyh1fldlcpcq8ckjfk8pmgdm"; - name = "sonnet-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/sonnet-5.45.0.tar.xz"; + sha256 = "0msrwxfvc4vr4xqpwavnj0w4cwkflfjql8nhgm5bvk6cpcxs92ss"; + name = "sonnet-5.45.0.tar.xz"; }; }; syntax-highlighting = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/syntax-highlighting-5.44.0.tar.xz"; - sha256 = "10s5m1as9c1kln8mc7zf2m8zsqrf9rxfa2rzfyff1kki1icp65nm"; - name = "syntax-highlighting-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/syntax-highlighting-5.45.0.tar.xz"; + sha256 = "1v73jzansk6z0kwq65gxvkcm7vcmgw2jvl7916aqzj8xjx8kp433"; + name = "syntax-highlighting-5.45.0.tar.xz"; }; }; threadweaver = { - version = "5.44.0"; + version = "5.45.0"; src = fetchurl { - url = "${mirror}/stable/frameworks/5.44/threadweaver-5.44.0.tar.xz"; - sha256 = "135x9z1rzvlhx13nbkacmcj7g0z88rpv0c2vy8yybysfaspc1hzn"; - name = "threadweaver-5.44.0.tar.xz"; + url = "${mirror}/stable/frameworks/5.45/threadweaver-5.45.0.tar.xz"; + sha256 = "16s1pgyxhs6v1w7pwg3rr97xkd24xmf23x24pcm15ybd9g38a5yp"; + name = "threadweaver-5.45.0.tar.xz"; }; }; } diff --git a/pkgs/development/libraries/kirigami/default.nix b/pkgs/development/libraries/kirigami/default.nix deleted file mode 100644 index 1127f3e197df..000000000000 --- a/pkgs/development/libraries/kirigami/default.nix +++ /dev/null @@ -1,47 +0,0 @@ -{ stdenv, fetchurl, cmake, extra-cmake-modules, pkgconfig -, plasma-framework, qtbase, qttranslations -, qtquickcontrols ? null -, qtquickcontrols2 ? null }: - -let - pname = "kirigami"; - - generic = { name, version, sha256, qtqc, broken }: - stdenv.mkDerivation rec { - inherit name version; - - src = fetchurl { - url = "mirror://kde/stable/${pname}/${name}.tar.xz"; - inherit sha256; - }; - - buildInputs = [ plasma-framework qtbase qtqc qttranslations ]; - - nativeBuildInputs = [ cmake pkgconfig extra-cmake-modules ]; - - meta = with stdenv.lib; { - license = licenses.lgpl2; - homepage = http://www.kde.org; - maintainers = with maintainers; [ ttuegel peterhoeg ]; - platforms = platforms.unix; - inherit broken; - }; - }; - -in { - kirigami_1 = generic rec { - name = "${pname}-${version}"; - version = "1.1.0"; - sha256 = "1p9ydggwbyfdgwmvyc8004sk9mfshlg9b83lzvz9qk3a906ayxv6"; - qtqc = qtquickcontrols; - broken = false; - }; - - kirigami_2 = generic rec { - name = "${pname}2-${version}"; - version = "2.1.0"; - sha256 = "0d79h10jzv9z7xzap4k9vbw6p9as8vdkz3x6xlzx407i9sbzyi77"; - qtqc = qtquickcontrols2; - broken = builtins.compareVersions qtbase.version "5.7.0" < 0; - }; -} diff --git a/pkgs/development/libraries/kpmcore/default.nix b/pkgs/development/libraries/kpmcore/default.nix index 8532a8880ce8..2a2f0c79490e 100644 --- a/pkgs/development/libraries/kpmcore/default.nix +++ b/pkgs/development/libraries/kpmcore/default.nix @@ -7,11 +7,11 @@ let in stdenv.mkDerivation rec { name = "${pname}-${version}"; - version = "3.0.3"; + version = "3.3.0"; src = fetchurl { url = "mirror://kde/stable/${pname}/${version}/src/${name}.tar.xz"; - sha256 = "17lqrp39w31fm7haigwq23cp92zwk3czjzqa2fhn3wafx3vafwd2"; + sha256 = "0s6v0jfrhjg31ri5p6h9n4w29jvasf5dj954j3vfpzl91lygmmmq"; }; buildInputs = [ diff --git a/pkgs/development/libraries/kproperty/default.nix b/pkgs/development/libraries/kproperty/default.nix index 52b5d944b413..455fb5a711c0 100644 --- a/pkgs/development/libraries/kproperty/default.nix +++ b/pkgs/development/libraries/kproperty/default.nix @@ -1,22 +1,23 @@ { mkDerivation, lib, fetchurl, extra-cmake-modules, - qtbase, kconfig, kcoreaddons, kwidgetsaddons, kguiaddons + qtbase, kconfig, kcoreaddons, kwidgetsaddons, kguiaddons, + qttools }: mkDerivation rec { pname = "kproperty"; - version = "3.0.2"; + version = "3.1.0"; name = "${pname}-${version}"; src = fetchurl { url = "mirror://kde/stable/${pname}/src/${name}.tar.xz"; - sha256 = "1hzkvdap7dzpnxlp4rfg5f24fhqjpqm2hlvv88gj4c0scbp73ynm"; + sha256 = "18qlwp7ajpx16bd0lfzqfx8y9cbrs8k4nax3cr30wj5sd3l8xpky"; }; nativeBuildInputs = [ extra-cmake-modules ]; - buildInputs = [ kconfig kcoreaddons kwidgetsaddons kguiaddons ]; + buildInputs = [ kconfig kcoreaddons kwidgetsaddons kguiaddons qttools ]; propagatedBuildInputs = [ qtbase ]; diff --git a/pkgs/development/libraries/kreport/default.nix b/pkgs/development/libraries/kreport/default.nix index 561e964c9610..3f44dbb9c138 100644 --- a/pkgs/development/libraries/kreport/default.nix +++ b/pkgs/development/libraries/kreport/default.nix @@ -6,12 +6,12 @@ mkDerivation rec { pname = "kreport"; - version = "3.0.2"; + version = "3.1.0"; name = "${pname}-${version}"; src = fetchurl { url = "mirror://kde/stable/${pname}/src/${name}.tar.xz"; - sha256 = "1zd3vhf26cyp8xrq11awm9pmhnk88ppyc0riyr0gxj8y703ahkp0"; + sha256 = "0v7krpfx0isij9wzwam28fqn039i4wcznbplvnvl6hsykdi8ar1v"; }; nativeBuildInputs = [ extra-cmake-modules ]; diff --git a/pkgs/development/libraries/leatherman/default.nix b/pkgs/development/libraries/leatherman/default.nix index 44d527e1304b..7b6834166d8c 100644 --- a/pkgs/development/libraries/leatherman/default.nix +++ b/pkgs/development/libraries/leatherman/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { name = "leatherman-${version}"; - version = "1.4.0"; + version = "1.4.1"; src = fetchFromGitHub { - sha256 = "0whlyzz0imv4lm69xkwhcd6jzh3s0rzlqjmwimbqz96p4771ivpd"; + sha256 = "0n516gqv501ymj99bickbr2cbhr109azh9hc1hn7flbcjzz3aljc"; rev = version; repo = "leatherman"; owner = "puppetlabs"; diff --git a/pkgs/development/libraries/libLAS/default.nix b/pkgs/development/libraries/libLAS/default.nix index 20531adcd1c7..272a9774a7f4 100644 --- a/pkgs/development/libraries/libLAS/default.nix +++ b/pkgs/development/libraries/libLAS/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, boost, cmake, gdal, libgeotiff, libtiff, LASzip }: +{ stdenv, fetchurl, boost, cmake, gdal, libgeotiff, libtiff, LASzip, fixDarwinDylibNames }: stdenv.mkDerivation rec { name = "libLAS-1.8.1"; @@ -9,14 +9,24 @@ stdenv.mkDerivation rec { sha256 = "0xjfxb3ydvr2258ji3spzyf81g9caap19ql2pk91wiivqsc4mnws"; }; - buildInputs = [ boost cmake gdal libgeotiff libtiff LASzip ]; + buildInputs = [ boost cmake gdal libgeotiff libtiff LASzip ] + ++ stdenv.lib.optional stdenv.isDarwin fixDarwinDylibNames; + cmakeFlags = [ + "-DGDAL_CONFIG=${gdal}/bin/gdal-config" + "-DWITH_LASZIP=ON" + "-DLASZIP_INCLUDE_DIR=${LASzip}/include" + ]; + + postFixup = stdenv.lib.optionalString stdenv.isDarwin '' + install_name_tool -change "@rpath/liblas.3.dylib" "$out/lib/liblas.3.dylib" $out/lib/liblas_c.dylib + ''; meta = { description = "LAS 1.0/1.1/1.2 ASPRS LiDAR data translation toolset"; homepage = http://www.liblas.org; license = stdenv.lib.licenses.bsd3; - platforms = stdenv.lib.platforms.linux; + platforms = stdenv.lib.platforms.unix; maintainers = [ stdenv.lib.maintainers.michelk ]; }; } diff --git a/pkgs/development/libraries/libbson/default.nix b/pkgs/development/libraries/libbson/default.nix index 6e9b033a976a..6b370f46e70d 100644 --- a/pkgs/development/libraries/libbson/default.nix +++ b/pkgs/development/libraries/libbson/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "libbson-${version}"; - version = "1.9.3"; + version = "1.9.4"; src = fetchFromGitHub { owner = "mongodb"; repo = "libbson"; rev = version; - sha256 = "0dbpmvd2p9bdqdyiijmsc1hd9d6l36migk79smw7fpfvh0y6ldsk"; + sha256 = "01lyikbpqky1ib8g4vhwpb5rjwyzm6g1z24z8m73lk4vcdl65190"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/libcouchbase/default.nix b/pkgs/development/libraries/libcouchbase/default.nix index 7c7cd1c3aae2..c3050bf8c676 100644 --- a/pkgs/development/libraries/libcouchbase/default.nix +++ b/pkgs/development/libraries/libcouchbase/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "libcouchbase-${version}"; - version = "2.8.5"; + version = "2.8.6"; src = fetchFromGitHub { owner = "couchbase"; repo = "libcouchbase"; rev = version; - sha256 = "1iwzf0y5f25g5hgdkmv6qf3k5mzlazrpx5sj3m2pvrl9jg9wn4s1"; + sha256 = "1in0fdl5mgzhwmd8kvniqkizi7isf2g2gvbknfbbdmxkki7a8p95"; }; cmakeFlags = "-DLCB_NO_MOCK=ON"; diff --git a/pkgs/development/libraries/libdazzle/default.nix b/pkgs/development/libraries/libdazzle/default.nix index 50f03f3ac7ac..faa8b483a780 100644 --- a/pkgs/development/libraries/libdazzle/default.nix +++ b/pkgs/development/libraries/libdazzle/default.nix @@ -2,7 +2,7 @@ , gtk-doc, docbook_xsl, dbus, xvfb_run, glib, gtk3, gnome3 }: let - version = "3.28.0"; + version = "3.28.1"; pname = "libdazzle"; in stdenv.mkDerivation { @@ -13,7 +13,7 @@ stdenv.mkDerivation { src = fetchurl { url = "mirror://gnome/sources/libdazzle/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; - sha256 = "0zq37i7gnmnc7qfngzhj71nqhf2wxl4m247s2ym9ykakxbi6zajp"; + sha256 = "04j9pjigpgxddq6y90y73k8qyjixlalip87q121ss5d8zp8xnz32"; }; nativeBuildInputs = [ ninja meson pkgconfig vala gobjectIntrospection libxml2 gtk-doc docbook_xsl dbus xvfb_run ]; diff --git a/pkgs/development/libraries/libdrm/default.nix b/pkgs/development/libraries/libdrm/default.nix index 82307e9ab163..ccae6ce50142 100644 --- a/pkgs/development/libraries/libdrm/default.nix +++ b/pkgs/development/libraries/libdrm/default.nix @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { "echo : \\\${ac_cv_func_clock_gettime=\'yes\'} > config.cache"; configureFlags = [ "--enable-install-test-programs" ] - ++ stdenv.lib.optionals (stdenv.isArm || stdenv.isAarch64) + ++ stdenv.lib.optionals (stdenv.isAarch32 || stdenv.isAarch64) [ "--enable-tegra-experimental-api" "--enable-etnaviv-experimental-api" ] ++ stdenv.lib.optional stdenv.isDarwin "-C"; diff --git a/pkgs/development/libraries/libdvdnav/default.nix b/pkgs/development/libraries/libdvdnav/default.nix index 42321b2f866a..b0dfd1e8fc12 100644 --- a/pkgs/development/libraries/libdvdnav/default.nix +++ b/pkgs/development/libraries/libdvdnav/default.nix @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { description = "A library that implements DVD navigation features such as DVD menus"; license = stdenv.lib.licenses.gpl2; maintainers = [ stdenv.lib.maintainers.wmertens ]; - platforms = stdenv.lib.platforms.linux; + platforms = stdenv.lib.platforms.unix; }; passthru = { inherit libdvdread; }; diff --git a/pkgs/development/libraries/libglvnd/default.nix b/pkgs/development/libraries/libglvnd/default.nix index 4bc1d1addcfb..7e1a2b549681 100644 --- a/pkgs/development/libraries/libglvnd/default.nix +++ b/pkgs/development/libraries/libglvnd/default.nix @@ -22,6 +22,9 @@ in stdenv.mkDerivation rec { "-DDEFAULT_EGL_VENDOR_CONFIG_DIRS=\"${driverLink}/share/glvnd/egl_vendor.d:/etc/glvnd/egl_vendor.d:/usr/share/glvnd/egl_vendor.d\"" ]; + # Indirectly: https://bugs.freedesktop.org/show_bug.cgi?id=35268 + configureFlags = stdenv.lib.optional stdenv.hostPlatform.isMusl "--disable-tls"; + # Upstream patch fixing use of libdl, should be in next release. patches = [ (fetchpatch { diff --git a/pkgs/development/libraries/libgphoto2/default.nix b/pkgs/development/libraries/libgphoto2/default.nix index 9c0ea4a3a73e..96b42ac068cc 100644 --- a/pkgs/development/libraries/libgphoto2/default.nix +++ b/pkgs/development/libraries/libgphoto2/default.nix @@ -7,7 +7,7 @@ stdenv.mkDerivation rec { owner = "gphoto"; repo = "libgphoto2"; rev = "${meta.tag}"; - sha256 = "1svbpmxqm56pqkv0rxhlyk4vw7mjgjz8zz4p669qvmw630082yj9"; + sha256 = "0pbfg89817qkb35mmajsw2iz6j9nhkkj67m419f8x8yxpqkaa0wb"; }; patches = []; @@ -33,8 +33,8 @@ stdenv.mkDerivation rec { MTP, and other vendor specific protocols for controlling and transferring data from digital cameras. ''; - version = "2.5.16"; - tag = "libgphoto2-2_5_16-release"; + version = "2.5.17"; + tag = "libgphoto2-2_5_17-release"; # XXX: the homepage claims LGPL, but several src files are lgpl21Plus license = stdenv.lib.licenses.lgpl21Plus; platforms = with stdenv.lib.platforms; unix; diff --git a/pkgs/development/libraries/libhttpseverywhere/default.nix b/pkgs/development/libraries/libhttpseverywhere/default.nix index 6af3f5225d4d..332dd8444eb4 100644 --- a/pkgs/development/libraries/libhttpseverywhere/default.nix +++ b/pkgs/development/libraries/libhttpseverywhere/default.nix @@ -3,13 +3,13 @@ let pname = "libhttpseverywhere"; - version = "0.8.2"; + version = "0.8.3"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${gnome3.versionBranch version}/${name}.tar.xz"; - sha256 = "0vcnimlfcscyvjbh845xbnjb9qc8x0mliaqz2gczxxpakxrbl3gh"; + sha256 = "1jmn6i4vsm89q1axlq4ajqkzqmlmjaml9xhw3h9jnal46db6y00w"; }; nativeBuildInputs = [ gnome3.vala gobjectIntrospection meson ninja pkgconfig ]; diff --git a/pkgs/development/libraries/libimobiledevice/default.nix b/pkgs/development/libraries/libimobiledevice/default.nix index cef9cc0af6b2..d1b779627c69 100644 --- a/pkgs/development/libraries/libimobiledevice/default.nix +++ b/pkgs/development/libraries/libimobiledevice/default.nix @@ -10,7 +10,8 @@ stdenv.mkDerivation rec { patches = [ ./disable_sslv3.patch - (fetchpatch { # CVE-2016-5104 + (fetchpatch { + name = "CVE-2016-5104.patch"; url = "https://github.com/libimobiledevice/libimobiledevice/commit/df1f5c4d70d0c19ad40072f5246ca457e7f9849e.patch"; sha256 = "06ygb9aqcvm4v08wrldsddjgyqv5bkpq6lxzq2a1nwqp9mq4a4k1"; }) diff --git a/pkgs/development/libraries/liblouis/default.nix b/pkgs/development/libraries/liblouis/default.nix index bde1ff4e4936..a6005d66b4d6 100644 --- a/pkgs/development/libraries/liblouis/default.nix +++ b/pkgs/development/libraries/liblouis/default.nix @@ -50,6 +50,7 @@ in stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "Open-source braille translator and back-translator"; homepage = http://liblouis.org/; + broken = true; license = licenses.lgpl21; maintainers = with maintainers; [ jtojnar ]; platforms = platforms.unix; diff --git a/pkgs/development/libraries/libminc/default.nix b/pkgs/development/libraries/libminc/default.nix index 673b572c0899..704c73284ae1 100644 --- a/pkgs/development/libraries/libminc/default.nix +++ b/pkgs/development/libraries/libminc/default.nix @@ -1,31 +1,42 @@ -{ stdenv, fetchFromGitHub, cmake, zlib, netcdf, hdf5 }: +{ stdenv, fetchFromGitHub, cmake, zlib, netcdf, nifticlib, hdf5 }: stdenv.mkDerivation rec { - name = "${pname}-2.3.00"; pname = "libminc"; + name = "${pname}-2017-09-14"; + owner = "BIC-MNI"; + + # current master is significantly ahead of most recent release, so use Git version: src = fetchFromGitHub { - owner = "BIC-MNI"; - repo = pname; - rev = builtins.replaceStrings [ "." ] [ "-" ] name; - sha256 = "1gv1rq1q1brhglll2256cm6sns77ph6fvgbzk3ihkzq46y07yi9s"; + inherit owner; + repo = pname; + rev = "e11c6df9321b4061bf87a7d43171ec55e9e3908f"; + sha256 = "0lmd0js3jgni2mw1zfvd4qg6byxiv3ndgv2z3nm7975i83zw48xk"; }; nativeBuildInputs = [ cmake ]; - buildInputs = [ zlib netcdf hdf5 ]; + buildInputs = [ zlib netcdf nifticlib hdf5 ]; + + cmakeFlags = [ "-DBUILD_TESTING=${if doCheck then "TRUE" else "FALSE"}" + "-DLIBMINC_MINC1_SUPPORT=TRUE" + "-DLIBMINC_BUILD_SHARED_LIBS=TRUE" + "-DLIBMINC_USE_SYSTEM_NIFTI=TRUE" ]; - cmakeFlags = [ "-DBUILD_TESTING=${if doCheck then "ON" else "OFF"}" - "-DLIBMINC_MINC1_SUPPORT=ON" ]; - checkPhase = "ctest"; + checkPhase = '' + export LD_LIBRARY_PATH="$(pwd)" # see #22060 + ctest -E 'ezminc_rw_test|minc_conversion' --output-on-failure + # ezminc_rw_test can't find libminc_io.so.5.2.0; minc_conversion hits netcdf compilation issue + ''; doCheck = true; enableParallelBuilding = true; meta = with stdenv.lib; { - homepage = https://github.com/BIC-MNI/libminc; + homepage = "https://github.com/${owner}/${pname}"; description = "Medical imaging library based on HDF5"; maintainers = with maintainers; [ bcdarwin ]; platforms = platforms.unix; + license = licenses.free; }; } diff --git a/pkgs/development/libraries/libmtp/default.nix b/pkgs/development/libraries/libmtp/default.nix index 88ef55715a7c..c3061626a6ae 100644 --- a/pkgs/development/libraries/libmtp/default.nix +++ b/pkgs/development/libraries/libmtp/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, pkgconfig, libusb1 }: +{ stdenv, fetchurl, pkgconfig, libusb1, libiconv }: stdenv.mkDerivation rec { name = "libmtp-1.1.15"; @@ -10,6 +10,7 @@ stdenv.mkDerivation rec { outputs = [ "bin" "dev" "out" ]; + buildInputs = [ libiconv ]; propagatedBuildInputs = [ libusb1 ]; nativeBuildInputs = [ pkgconfig ]; @@ -24,7 +25,7 @@ stdenv.mkDerivation rec { in the form of a library suitable primarily for POSIX compliant operating systems. We implement MTP Basic, the stuff proposed for standardization. ''; - platforms = stdenv.lib.platforms.linux; + platforms = stdenv.lib.platforms.unix; maintainers = [ ]; }; } diff --git a/pkgs/development/libraries/libpqxx/default.nix b/pkgs/development/libraries/libpqxx/default.nix index eb70677b3e95..a6dd719a3812 100644 --- a/pkgs/development/libraries/libpqxx/default.nix +++ b/pkgs/development/libraries/libpqxx/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "libpqxx-${version}"; - version = "6.1.1"; + version = "6.2.2"; src = fetchFromGitHub { owner = "jtv"; repo = "libpqxx"; rev = version; - sha256 = "0yw0wvnpw0j560f5zv4gvmafi19d9hrknwjzl7qrss926aqx65jq"; + sha256 = "0f7mkl29v6d47kkdpl2gkb9xc5lnih2pq9pk3cq6nc2j6w758yp5"; }; nativeBuildInputs = [ gnused python2 ]; diff --git a/pkgs/development/libraries/libqrencode/default.nix b/pkgs/development/libraries/libqrencode/default.nix index 337d9423aa3d..7c1844bf281e 100644 --- a/pkgs/development/libraries/libqrencode/default.nix +++ b/pkgs/development/libraries/libqrencode/default.nix @@ -3,12 +3,12 @@ stdenv.mkDerivation rec { name = "libqrencode-${version}"; - version = "3.4.4"; + version = "4.0.0"; src = fetchurl { url = "https://fukuchi.org/works/qrencode/qrencode-${version}.tar.gz"; sha1 = "644054a76c8b593acb66a8c8b7dcf1b987c3d0b2"; - sha256 = "0wiagx7i8p9zal53smf5abrnh9lr31mv0p36wg017401jrmf5577"; + sha256 = "10da4q5pym7pzxcv21w2kc2rxmq7sp1rg58zdklwfr0jjci1nqjv"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/librdf/rasqal.nix b/pkgs/development/libraries/librdf/rasqal.nix index 56272b319917..ceff244670f3 100644 --- a/pkgs/development/libraries/librdf/rasqal.nix +++ b/pkgs/development/libraries/librdf/rasqal.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, librdf_raptor2, gmp, pkgconfig, pcre, libxml2 }: stdenv.mkDerivation rec { - name = "rasqal-0.9.32"; + name = "rasqal-0.9.33"; src = fetchurl { url = "http://download.librdf.org/source/${name}.tar.gz"; - sha256 = "eeba03218e3b7dfa033934d523a1a64671a9a0f64eadc38a01e4b43367be2e8f"; + sha256 = "0z6rrwn4jsagvarg8d5zf0j352kjgi33py39jqd29gbhcnncj939"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/libre/default.nix b/pkgs/development/libraries/libre/default.nix index ebe765a0d0d4..c996c5c25f94 100644 --- a/pkgs/development/libraries/libre/default.nix +++ b/pkgs/development/libraries/libre/default.nix @@ -1,10 +1,10 @@ {stdenv, fetchurl, zlib, openssl}: stdenv.mkDerivation rec { - version = "0.5.7"; + version = "0.5.8"; name = "libre-${version}"; src = fetchurl { url = "http://www.creytiv.com/pub/re-${version}.tar.gz"; - sha256 = "0f8h224xfzvnb2ngvhxz8gzxqjlkkfr6d0nj8zqivzr81ihibk2x"; + sha256 = "0w0f8j43j0nzgvkmv3ayzrssppgjmsh6z8mpa5iqsz8nv99dc3qr"; }; buildInputs = [ zlib openssl ]; makeFlags = [ "USE_ZLIB=1" "USE_OPENSSL=1" "PREFIX=$(out)" ] diff --git a/pkgs/development/libraries/librem/default.nix b/pkgs/development/libraries/librem/default.nix index f6e041e57322..b173eddda7d0 100644 --- a/pkgs/development/libraries/librem/default.nix +++ b/pkgs/development/libraries/librem/default.nix @@ -1,10 +1,10 @@ {stdenv, fetchurl, zlib, openssl, libre}: stdenv.mkDerivation rec { - version = "0.5.2"; + version = "0.5.3"; name = "librem-${version}"; src=fetchurl { url = "http://www.creytiv.com/pub/rem-${version}.tar.gz"; - sha256 = "1sv4986yyq42irk9alwp20gc3r5y0r6kix15sl8qmljgxn0lxigv"; + sha256 = "0l401sn8lkzz9gvnvww6839xa0ys1q7w66krln194w6l8ycsg64z"; }; buildInputs = [zlib openssl libre]; makeFlags = [ diff --git a/pkgs/development/libraries/librime/default.nix b/pkgs/development/libraries/librime/default.nix index 1384b3e7a74e..e6d2612fe626 100644 --- a/pkgs/development/libraries/librime/default.nix +++ b/pkgs/development/libraries/librime/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "librime-${version}"; - version = "1.3.0"; + version = "1.3.1"; src = fetchFromGitHub { owner = "rime"; repo = "librime"; rev = "${version}"; - sha256 = "1sxxxliqjjsfblx9n6ijw9gx40xqw71v352b28aw51gg3k201v0j"; + sha256 = "1y0h3nnz97smx9z8h5fzk4c27mvrwv8kajxffqc43bhyvxvb2jd6"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/libtoxcore/default.nix b/pkgs/development/libraries/libtoxcore/default.nix index 16fca9ce3d39..9af8718dc5fe 100644 --- a/pkgs/development/libraries/libtoxcore/default.nix +++ b/pkgs/development/libraries/libtoxcore/default.nix @@ -20,7 +20,7 @@ stdenv.mkDerivation rec { buildInputs = [ libsodium libmsgpack ncurses libconfig - ] ++ stdenv.lib.optionals (!stdenv.isArm) [ + ] ++ stdenv.lib.optionals (!stdenv.isAarch32) [ libopus libvpx ]; diff --git a/pkgs/development/libraries/libtoxcore/new-api.nix b/pkgs/development/libraries/libtoxcore/new-api.nix index 8d0a467c82a8..785bc6f3c843 100644 --- a/pkgs/development/libraries/libtoxcore/new-api.nix +++ b/pkgs/development/libraries/libtoxcore/new-api.nix @@ -33,11 +33,11 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook pkgconfig ]; buildInputs = [ autoreconfHook libsodium ncurses check libconfig - ] ++ stdenv.lib.optionals (!stdenv.isArm) [ + ] ++ stdenv.lib.optionals (!stdenv.isAarch32) [ libopus ]; - propagatedBuildInputs = stdenv.lib.optionals (!stdenv.isArm) [ libvpx ]; + propagatedBuildInputs = stdenv.lib.optionals (!stdenv.isAarch32) [ libvpx ]; # Some tests fail randomly due to timeout. This kind of problem is well known # by upstream: https://github.com/irungentoo/toxcore/issues/{950,1054} diff --git a/pkgs/development/libraries/libusbmuxd/default.nix b/pkgs/development/libraries/libusbmuxd/default.nix index 3e8beef3c9d0..3d15b698b481 100644 --- a/pkgs/development/libraries/libusbmuxd/default.nix +++ b/pkgs/development/libraries/libusbmuxd/default.nix @@ -8,7 +8,8 @@ stdenv.mkDerivation rec { }; patches = [ - (fetchpatch { # CVE-2016-5104 + (fetchpatch { + name = "CVE-2016-5104.patch"; url = "https://github.com/libimobiledevice/libusbmuxd/commit/4397b3376dc4e4cb1c991d0aed61ce6482614196.patch"; sha256 = "0cl3vys7bkwbdzf64d0rz3zlqpfc30w4l7j49ljv01agh42ywhgk"; }) diff --git a/pkgs/development/libraries/libvpx/default.nix b/pkgs/development/libraries/libvpx/default.nix index 1e96ff9bb1ad..272761cc6af3 100644 --- a/pkgs/development/libraries/libvpx/default.nix +++ b/pkgs/development/libraries/libvpx/default.nix @@ -41,7 +41,7 @@ }: let - inherit (stdenv) isi686 isx86_64 isArm is64bit isMips isDarwin isCygwin; + inherit (stdenv) isi686 isx86_64 isAarch32 is64bit isMips isDarwin isCygwin; inherit (stdenv.lib) enableFeature optional optionals; in diff --git a/pkgs/development/libraries/libvpx/git.nix b/pkgs/development/libraries/libvpx/git.nix index ef499f238d63..e2b94dda28e7 100644 --- a/pkgs/development/libraries/libvpx/git.nix +++ b/pkgs/development/libraries/libvpx/git.nix @@ -43,11 +43,11 @@ }: let - inherit (stdenv) isi686 isx86_64 isArm is64bit isMips isDarwin isCygwin; + inherit (stdenv) isi686 isx86_64 isAarch32 is64bit isMips isDarwin isCygwin; inherit (stdenv.lib) enableFeature optional optionals; in -assert isi686 || isx86_64 || isArm || isMips; # Requires ARM with floating point support +assert isi686 || isx86_64 || isAarch32 || isMips; # Requires ARM with floating point support assert vp8DecoderSupport || vp8EncoderSupport || vp9DecoderSupport || vp9EncoderSupport; assert internalStatsSupport && (vp9DecoderSupport || vp9EncoderSupport) -> postprocSupport; diff --git a/pkgs/development/libraries/libwnck/3.x.nix b/pkgs/development/libraries/libwnck/3.x.nix index 937fa28b9028..8efd908584e1 100644 --- a/pkgs/development/libraries/libwnck/3.x.nix +++ b/pkgs/development/libraries/libwnck/3.x.nix @@ -19,8 +19,8 @@ in stdenv.mkDerivation rec{ nativeBuildInputs = [ pkgconfig intltool gobjectIntrospection ]; propagatedBuildInputs = [ libX11 gtk3 ]; - PKG_CONFIG_GOBJECT_INTROSPECTION_1_0_GIRDIR = "share/gir-1.0"; - PKG_CONFIG_GOBJECT_INTROSPECTION_1_0_TYPELIBDIR = "lib/girepository-1.0"; + PKG_CONFIG_GOBJECT_INTROSPECTION_1_0_GIRDIR = "$(dev)/share/gir-1.0"; + PKG_CONFIG_GOBJECT_INTROSPECTION_1_0_TYPELIBDIR = "$(out)/lib/girepository-1.0"; passthru = { updateScript = gnome3.updateScript { diff --git a/pkgs/development/libraries/linbox/default.nix b/pkgs/development/libraries/linbox/default.nix new file mode 100644 index 000000000000..0f5442bd63b6 --- /dev/null +++ b/pkgs/development/libraries/linbox/default.nix @@ -0,0 +1,79 @@ +{ stdenv +, fetchFromGitHub +, fetchpatch +, autoreconfHook +, givaro +, pkgconfig +, openblas +, liblapack +, fflas-ffpack +, gmpxx +, optimize ? false # impure +, withSage ? false # sage support +}: +stdenv.mkDerivation rec { + name = "${pname}-${version}"; + pname = "linbox"; + version = "1.5.2"; + + src = fetchFromGitHub { + owner = "linbox-team"; + repo = "${pname}"; + rev = "v${version}"; + sha256 = "1wfivlwp30mzdy1697w7rzb8caajim50mc8h27k82yipn2qc5n4i"; + }; + + nativeBuildInputs = [ + autoreconfHook + pkgconfig + ]; + + buildInputs = [ + givaro + (liblapack.override {shared = true;}) + openblas + gmpxx + fflas-ffpack + ]; + + configureFlags = [ + "--with-blas-libs=-lopenblas" + "--with-lapack-libs=-llapack" + "--disable-optimization" + ] ++ stdenv.lib.optionals (!optimize) [ + # disable SIMD instructions (which are enabled *when available* by default) + "--disable-sse" + "--disable-sse2" + "--disable-sse3" + "--disable-ssse3" + "--disable-sse41" + "--disable-sse42" + "--disable-avx" + "--disable-avx2" + "--disable-fma" + "--disable-fma4" + ] ++ stdenv.lib.optionals withSage [ + "--enable-sage" + ]; + + patches = stdenv.lib.optionals withSage [ + # https://trac.sagemath.org/ticket/24214#comment:39 + # Will be resolved by + # https://github.com/linbox-team/linbox/issues/69 + (fetchpatch { + url = "https://raw.githubusercontent.com/sagemath/sage/a843f48b7a4267e44895a3dfa892c89c85b85611/build/pkgs/linbox/patches/linbox_charpoly_fullCRA.patch"; + sha256 = "16nxfzfknra3k2yk3xy0k8cq9rmnmsch3dnkb03kx15h0y0jmibk"; + }) + ]; + + doCheck = true; + + meta = { + inherit version; + description = "C++ library for exact, high-performance linear algebra"; + license = stdenv.lib.licenses.lgpl21Plus; + maintainers = [stdenv.lib.maintainers.timokau]; + platforms = stdenv.lib.platforms.linux; + homepage = http://linalg.org/; + }; +} diff --git a/pkgs/development/libraries/live555/default.nix b/pkgs/development/libraries/live555/default.nix index 1479f7b6153b..e0cf3328bac2 100644 --- a/pkgs/development/libraries/live555/default.nix +++ b/pkgs/development/libraries/live555/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl }: +{ stdenv, fetchurl, lib, darwin }: # Based on https://projects.archlinux.org/svntogit/packages.git/tree/trunk/PKGBUILD let @@ -12,19 +12,23 @@ stdenv.mkDerivation { sha256 = "0zi47asv1qmb09g321m02q684i3c90vci0mgkdh1mlmx2rbg1d1d"; }; - postPatch = "sed 's,/bin/rm,rm,g' -i genMakefiles" - + stdenv.lib.optionalString (stdenv ? glibc) '' - + postPatch = '' + sed 's,/bin/rm,rm,g' -i genMakefiles + sed \ + -e 's/$(INCLUDES) -I. -O2 -DSOCKLEN_T/$(INCLUDES) -I. -O2 -I. -fPIC -DRTSPCLIENT_SYNCHRONOUS_INTERFACE=1 -DSOCKLEN_T/g' \ + -i config.linux + '' + stdenv.lib.optionalString (stdenv ? glibc) '' substituteInPlace liveMedia/include/Locale.hh \ --replace '<xlocale.h>' '<locale.h>' ''; configurePhase = '' - sed \ - -e 's/$(INCLUDES) -I. -O2 -DSOCKLEN_T/$(INCLUDES) -I. -O2 -I. -fPIC -DRTSPCLIENT_SYNCHRONOUS_INTERFACE=1 -DSOCKLEN_T/g' \ - -i config.linux - - ./genMakefiles linux + ./genMakefiles ${{ + x86_64-darwin = "macosx"; + i686-linux = "linux"; + x86_64-linux = "linux-64bit"; + aarch64-linux = "linux-64bit"; + }.${stdenv.system}} ''; installPhase = '' @@ -35,10 +39,12 @@ stdenv.mkDerivation { done ''; - meta = with stdenv.lib; { + nativeBuildInputs = lib.optional stdenv.isDarwin darwin.cctools; + + meta = with lib; { description = "Set of C++ libraries for multimedia streaming, using open standard protocols (RTP/RTCP, RTSP, SIP)"; homepage = http://www.live555.com/liveMedia/; license = licenses.lgpl21Plus; - platforms = platforms.linux; + platforms = platforms.unix; }; } diff --git a/pkgs/development/libraries/mbedtls/default.nix b/pkgs/development/libraries/mbedtls/default.nix index 91fcba97e184..8c2a2a694b03 100644 --- a/pkgs/development/libraries/mbedtls/default.nix +++ b/pkgs/development/libraries/mbedtls/default.nix @@ -1,13 +1,13 @@ { stdenv, fetchFromGitHub, perl }: stdenv.mkDerivation rec { - name = "mbedtls-2.7.1"; + name = "mbedtls-2.8.0"; src = fetchFromGitHub { owner = "ARMmbed"; repo = "mbedtls"; rev = name; - sha256 = "0dkmhvs38sqgnfxgzrs81ghajyyzp9bb7wy9kn96q7zy4lly0gg6"; + sha256 = "1pnwmy0qg8g9lz26fpr5fzpvrdjm59winxpwdjfp6d62qxdjbgmn"; }; nativeBuildInputs = [ perl ]; diff --git a/pkgs/development/libraries/mesa/default.nix b/pkgs/development/libraries/mesa/default.nix index e77a4e1414e9..2beb7e600804 100644 --- a/pkgs/development/libraries/mesa/default.nix +++ b/pkgs/development/libraries/mesa/default.nix @@ -33,17 +33,17 @@ else let defaultGalliumDrivers = - if stdenv.isArm + if stdenv.isAarch32 then ["nouveau" "freedreno" "vc4" "etnaviv" "imx"] else if stdenv.isAarch64 then ["nouveau" "vc4" ] else ["svga" "i915" "r300" "r600" "radeonsi" "nouveau"]; defaultDriDrivers = - if (stdenv.isArm || stdenv.isAarch64) + if (stdenv.isAarch32 || stdenv.isAarch64) then ["nouveau"] else ["i915" "i965" "nouveau" "radeon" "r200"]; defaultVulkanDrivers = - if (stdenv.isArm || stdenv.isAarch64) + if (stdenv.isAarch32 || stdenv.isAarch64) then [] else ["intel"] ++ lib.optional enableRadv "radeon"; in @@ -125,7 +125,8 @@ let self = stdenv.mkDerivation { "--enable-gles1" "--enable-gles2" "--enable-glx" - "--enable-glx-tls" + # https://bugs.freedesktop.org/show_bug.cgi?id=35268 + (enableFeature (!stdenv.hostPlatform.isMusl) "glx-tls") "--enable-gallium-osmesa" # used by wine "--enable-llvm" "--enable-egl" diff --git a/pkgs/development/libraries/ndn-cxx/default.nix b/pkgs/development/libraries/ndn-cxx/default.nix index ee7d4765fb22..1040cb9a9343 100644 --- a/pkgs/development/libraries/ndn-cxx/default.nix +++ b/pkgs/development/libraries/ndn-cxx/default.nix @@ -45,5 +45,6 @@ stdenv.mkDerivation { license = licenses.lgpl3; platforms = stdenv.lib.platforms.unix; maintainers = [ maintainers.sjmackenzie ]; + broken = true; # 2018-04-11 }; } diff --git a/pkgs/development/libraries/nix-plugins/default.nix b/pkgs/development/libraries/nix-plugins/default.nix index 392d4daa0d1a..c4a30f52b050 100644 --- a/pkgs/development/libraries/nix-plugins/default.nix +++ b/pkgs/development/libraries/nix-plugins/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, nix, cmake, pkgconfig, boost }: -let version = "4.0.3"; in +let version = "4.0.4"; in stdenv.mkDerivation { name = "nix-plugins-${version}"; @@ -7,7 +7,7 @@ stdenv.mkDerivation { owner = "shlevy"; repo = "nix-plugins"; rev = version; - sha256 = "0dkrrh94s3gvym7hhdqivxzphsjh0828c0y6w6a51xdpm8rlajzj"; + sha256 = "02lz62n55pvqin4x44qlxb5knrapyckmj9k8ggk4qxgb36368ifn"; }; nativeBuildInputs = [ cmake pkgconfig ]; diff --git a/pkgs/development/libraries/oniguruma/default.nix b/pkgs/development/libraries/oniguruma/default.nix index 974c2e482ea5..f9a75801e101 100644 --- a/pkgs/development/libraries/oniguruma/default.nix +++ b/pkgs/development/libraries/oniguruma/default.nix @@ -2,27 +2,22 @@ stdenv.mkDerivation rec { name = "onig-${version}"; - version = "6.7.1"; + version = "6.8.2"; src = fetchFromGitHub { owner = "kkos"; repo = "oniguruma"; rev = "v${version}"; - sha256 = "07xbx4f3h1aqvy6587xbr8fgcn679ph3bd86pp144y0agzw0d0q2"; + sha256 = "00ly5i26n7wajhyhq3xadsc7dxrf7qllhwilk8dza2qj5dhld4nd"; }; nativeBuildInputs = [ cmake ]; - prePatch = stdenv.lib.optional stdenv.isDarwin '' - substituteInPlace cmake/dist.cmake \ - --replace '@executable_path/''${UP_DIR}/''${INSTALL_LIB}' $out'/''${INSTALL_LIB}' - ''; - - meta = { + meta = with stdenv.lib; { homepage = https://github.com/kkos/oniguruma; description = "Regular expressions library"; - license = stdenv.lib.licenses.bsd2; - maintainers = with stdenv.lib.maintainers; [ fuuzetsu ]; - platforms = with stdenv.lib.platforms; unix; + license = licenses.bsd2; + maintainers = with maintainers; [ fuuzetsu ]; + platforms = platforms.unix; }; } diff --git a/pkgs/development/libraries/opendht/default.nix b/pkgs/development/libraries/opendht/default.nix index 68486fca54d6..fc2068ca02ca 100644 --- a/pkgs/development/libraries/opendht/default.nix +++ b/pkgs/development/libraries/opendht/default.nix @@ -13,13 +13,13 @@ stdenv.mkDerivation rec { name = "opendht-${version}"; - version = "1.6.1"; + version = "1.7.0"; src = fetchFromGitHub { owner = "savoirfairelinux"; repo = "opendht"; rev = "${version}"; - sha256 = "13sxcg2sdhnzdkrjqmhg16p4001w3rd048p71k74pbmi8qpd0bw2"; + sha256 = "14pdih09h3bmgimmj9sa917x7kld49m91gvh0lcncink8rmbxvf1"; }; buildInputs = [ diff --git a/pkgs/development/libraries/openmpi/default.nix b/pkgs/development/libraries/openmpi/default.nix index 9aca076c5dcb..2d3b9780090d 100644 --- a/pkgs/development/libraries/openmpi/default.nix +++ b/pkgs/development/libraries/openmpi/default.nix @@ -9,14 +9,14 @@ let majorVersion = "3.0"; - minorVersion = "0"; + minorVersion = "1"; in stdenv.mkDerivation rec { name = "openmpi-${majorVersion}.${minorVersion}"; src = fetchurl { url = "http://www.open-mpi.org/software/ompi/v${majorVersion}/downloads/${name}.tar.bz2"; - sha256 = "1mw2d94k6mp4scg1wnkj50vdh734fy5m2ygyrj65s4mh3prbz6gn"; + sha256 = "0pbqrm5faf57nasy1s81wqivl7zvxmv8lzjh8hvb0f3qxv8m0d36"; }; postPatch = '' diff --git a/pkgs/development/libraries/parquet-cpp/default.nix b/pkgs/development/libraries/parquet-cpp/default.nix new file mode 100644 index 000000000000..e281e604380b --- /dev/null +++ b/pkgs/development/libraries/parquet-cpp/default.nix @@ -0,0 +1,37 @@ +{ stdenv, symlinkJoin, fetchurl, arrow-cpp, boost, cmake, gtest, snappy, thrift, zlib }: + +stdenv.mkDerivation rec { + name = "parquet-cpp-${version}"; + version = "1.4.0"; + + src = fetchurl { + url = "https://github.com/apache/parquet-cpp/archive/apache-${name}.tar.gz"; + sha256 = "1kn7pjzi5san5f05qbl8l8znqsa3f9cq9bflfr4s2jfwr7k9p2aj"; + }; + + nativeBuildInputs = [ cmake ]; + buildInputs = [ boost ]; + + preConfigure = '' + substituteInPlace cmake_modules/FindThrift.cmake --replace CMAKE_STATIC_LIBRARY CMAKE_SHARED_LIBRARY + substituteInPlace cmake_modules/FindSnappy.cmake --replace CMAKE_STATIC_LIBRARY CMAKE_SHARED_LIBRARY + ''; + + ARROW_HOME = arrow-cpp; + THRIFT_HOME = thrift; + GTEST_HOME = gtest; + SNAPPY_HOME = symlinkJoin { name="snappy-wrap"; paths = [ snappy snappy.dev ]; }; + ZLIB_HOME = symlinkJoin { name="zlib-wrap"; paths = [ zlib.dev zlib.static ]; }; + + cmakeFlags = [ + "-DPARQUET_BUILD_BENCHMARKS=OFF" + ]; + + meta = { + description = "A C++ library to read and write the Apache Parquet columnar data format"; + homepage = http://parquet.apache.org; + license = stdenv.lib.licenses.asl20; + platforms = stdenv.lib.platforms.unix; + maintainers = with stdenv.lib.maintainers; [ veprbl ]; + }; +} diff --git a/pkgs/development/libraries/pixman/default.nix b/pkgs/development/libraries/pixman/default.nix index e70ffc3eb2f1..2987c67ae757 100644 --- a/pkgs/development/libraries/pixman/default.nix +++ b/pkgs/development/libraries/pixman/default.nix @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { buildInputs = stdenv.lib.optional doCheck libpng; - configureFlags = stdenv.lib.optional stdenv.isArm "--disable-arm-iwmmxt"; + configureFlags = stdenv.lib.optional stdenv.isAarch32 "--disable-arm-iwmmxt"; doCheck = true; diff --git a/pkgs/development/libraries/pth/default.nix b/pkgs/development/libraries/pth/default.nix index b7b09caed9b3..6118d9c41d6f 100644 --- a/pkgs/development/libraries/pth/default.nix +++ b/pkgs/development/libraries/pth/default.nix @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { sha256 = "0ckjqw5kz5m30srqi87idj7xhpw6bpki43mj07bazjm2qmh3cdbj"; }; - preConfigure = stdenv.lib.optionalString stdenv.isArm '' + preConfigure = stdenv.lib.optionalString stdenv.isAarch32 '' configureFlagsArray=("CFLAGS=-DJB_SP=8 -DJB_PC=9") ''; diff --git a/pkgs/development/libraries/qscintilla/default.nix b/pkgs/development/libraries/qscintilla/default.nix index f442e1bf908e..281dbe0a5eda 100644 --- a/pkgs/development/libraries/qscintilla/default.nix +++ b/pkgs/development/libraries/qscintilla/default.nix @@ -10,13 +10,13 @@ let xcodePatch = in stdenv.mkDerivation rec { pname = "qscintilla"; - version = "2.9.4"; + version = "2.10.3"; name = "${pname}-${if withQt5 then "qt5" else "qt4"}-${version}"; src = fetchurl { url = "mirror://sourceforge/pyqt/QScintilla2/QScintilla-${version}/QScintilla_gpl-${version}.zip"; - sha256 = "04678skipydx68zf52vznsfmll2v9aahr66g50lcqbr6xsmgr1yi"; + sha256 = "0rsx0b0iz5yf3x594kzhi0c2wpbmknv9b0a3rmx5w37bvmpd6qav"; }; buildInputs = [ (if withQt5 then qtbase else qt4) ] diff --git a/pkgs/development/libraries/qt-5/mkDerivation.nix b/pkgs/development/libraries/qt-5/mkDerivation.nix index 739c9b4a1608..96014cfbc779 100644 --- a/pkgs/development/libraries/qt-5/mkDerivation.nix +++ b/pkgs/development/libraries/qt-5/mkDerivation.nix @@ -9,9 +9,8 @@ args: let args_ = { - qmakeFlags = - (args.qmakeFlags or []) - ++ [ ("CONFIG+=" + (if debug then "debug" else "release")) ]; + qmakeFlags = [ ("CONFIG+=" + (if debug then "debug" else "release")) ] + ++ (args.qmakeFlags or []); NIX_CFLAGS_COMPILE = optional (!debug) "-DQT_NO_DEBUG" diff --git a/pkgs/development/libraries/qt-5/modules/qtwebengine.nix b/pkgs/development/libraries/qt-5/modules/qtwebengine.nix index 08345510d787..e798d529ce1b 100644 --- a/pkgs/development/libraries/qt-5/modules/qtwebengine.nix +++ b/pkgs/development/libraries/qt-5/modules/qtwebengine.nix @@ -11,9 +11,8 @@ , libcap , pciutils , systemd - , enableProprietaryCodecs ? true - +, gn, darwin, openbsm , lib, stdenv # lib.optional, needsPax }: @@ -25,7 +24,7 @@ qtModule { name = "qtwebengine"; qtInputs = [ qtdeclarative qtquickcontrols qtlocation qtwebchannel ]; nativeBuildInputs = [ - bison coreutils flex git gperf ninja pkgconfig python2 which + bison coreutils flex git gperf ninja pkgconfig python2 which gn ]; doCheck = true; outputs = [ "bin" "dev" "out" ]; @@ -61,8 +60,50 @@ qtModule { sed -i -e '/libpci_loader.*Load/s!"\(libpci\.so\)!"${pciutils}/lib/\1!' \ src/3rdparty/chromium/gpu/config/gpu_info_collector_linux.cc + '' + + optionalString stdenv.isDarwin '' + # Remove annoying xcode check + substituteInPlace mkspecs/features/platform.prf \ + --replace "lessThan(QMAKE_XCODE_VERSION, 7.3)" false + substituteInPlace src/core/config/mac_osx.pri \ + --replace /usr ${stdenv.cc} \ + --replace "isEmpty(QMAKE_MAC_SDK_VERSION)" false + + # FIXME Needed with old Apple SDKs + # Abandon all hope ye who try to make sense of this. + substituteInPlace src/3rdparty/chromium/base/mac/foundation_util.mm \ + --replace "NSArray<NSString*>*" "NSArray*" + substituteInPlace src/3rdparty/chromium/base/mac/sdk_forward_declarations.h \ + --replace "NSDictionary<VNImageOption, id>*" "NSDictionary*" \ + --replace "NSArray<VNRequest*>*" "NSArray*" \ + --replace "typedef NSString* VNImageOption NS_STRING_ENUM" "typedef NSString* VNImageOption" + + cat <<EOF > src/3rdparty/chromium/build/mac/find_sdk.py +#!/usr/bin/env python +print("10.10.0") +print("") +EOF + + cat <<EOF > src/3rdparty/chromium/build/config/mac/sdk_info.py +#!/usr/bin/env python +print('xcode_version="9.1"') +print('xcode_version_int=9') +print('xcode_build="9B55"') +print('machine_os_build="17E199"') +print('sdk_path=""') +print('sdk_version="10.10"') +print('sdk_platform_path=""') +print('sdk_build="17B41"') +EOF + + # Apple has some secret stuff they don't share with OpenBSM + substituteInPlace src/3rdparty/chromium/base/mac/mach_port_broker.mm \ + --replace "audit_token_to_pid(msg.trailer.msgh_audit)" "msg.trailer.msgh_audit.val[5]" + substituteInPlace src/3rdparty/chromium/sandbox/mac/bootstrap_sandbox.cc \ + --replace "audit_token_to_pid(msg.trailer.msgh_audit)" "msg.trailer.msgh_audit.val[5]" ''; + NIX_CFLAGS_COMPILE = lib.optionalString stdenv.isDarwin "-DMAC_OS_X_VERSION_MAX_ALLOWED=MAC_OS_X_VERSION_10_10 -DMAC_OS_X_VERSION_MIN_REQUIRED=MAC_OS_X_VERSION_10_10"; preConfigure = '' export NINJAFLAGS=-j$NIX_BUILD_CORES @@ -70,13 +111,9 @@ qtModule { if [ -d "$PWD/tools/qmake" ]; then QMAKEPATH="$PWD/tools/qmake''${QMAKEPATH:+:}$QMAKEPATH" fi - ''; + ''; - qmakeFlags = - [ - # Use system Ninja because bootstrapping it is fragile - "WEBENGINE_CONFIG+=use_system_ninja" - ] ++ optional enableProprietaryCodecs "WEBENGINE_CONFIG+=use_proprietary_codecs"; + qmakeFlags = optional enableProprietaryCodecs "-- -proprietary-codecs"; propagatedBuildInputs = [ # Image formats @@ -90,9 +127,10 @@ qtModule { # Text rendering harfbuzz icu - ] - ++ optionals (!stdenv.isDarwin) [ - dbus zlib minizip snappy nss protobuf jsoncpp libevent + + libevent + ] ++ optionals (!stdenv.isDarwin) [ + dbus zlib minizip snappy nss protobuf jsoncpp # Audio formats alsaLib @@ -106,17 +144,44 @@ qtModule { # X11 libs xorg.xrandr libXScrnSaver libXcursor libXrandr xorg.libpciaccess libXtst xorg.libXcomposite xorg.libXdamage libdrm - ]; + ] + + # FIXME These dependencies shouldn't be needed but can't find a way + # around it. Chromium pulls this in while bootstrapping GN. + ++ lib.optionals stdenv.isDarwin (with darwin; with apple_sdk.frameworks; [ + libobjc + cctools + + # frameworks + ApplicationServices + Foundation + AppKit + ImageCaptureCore + CoreBluetooth + IOBluetooth + CoreWLAN + Quartz + Cocoa + + openbsm + libunwind + ]); dontUseNinjaBuild = true; dontUseNinjaInstall = true; - postInstall = '' + postInstall = lib.optionalString stdenv.isLinux '' cat > $out/libexec/qt.conf <<EOF [Paths] Prefix = .. EOF - paxmark m $out/libexec/QtWebEngineProcess ''; + + meta = with lib; { + description = "A web engine based on the Chromium web browser"; + maintainers = with maintainers; [ matthewbauer ]; + platforms = platforms.unix; + }; + } diff --git a/pkgs/development/libraries/qtstyleplugin-kvantum/default.nix b/pkgs/development/libraries/qtstyleplugin-kvantum/default.nix index 5085d9bf5ef9..8667f272cf7d 100644 --- a/pkgs/development/libraries/qtstyleplugin-kvantum/default.nix +++ b/pkgs/development/libraries/qtstyleplugin-kvantum/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "qtstyleplugin-kvantum-${version}"; - version = "0.10.4"; + version = "0.10.6"; src = fetchFromGitHub { owner = "tsujan"; repo = "Kvantum"; - rev = "0527bb03f2252269fd382e11181a34ca72c96b4b"; - sha256 = "0ky44s1fgqxraywagx1mv07yz76ppgiz3prq447db78wkwqg2d8p"; + rev = "a6daa1a6df3c5d4abc7ea39ef7028ddea2addbf6"; + sha256 = "1zns4x95h0ydiwx8yw0bmyg4lc2sy7annmdrg66sx753x3177zxp"; }; nativeBuildInputs = [ qmake qttools ]; @@ -16,15 +16,16 @@ stdenv.mkDerivation rec { postUnpack = "sourceRoot=\${sourceRoot}/Kvantum"; - postInstall= '' - mkdir -p $out/$qtPluginPrefix/styles - mv $NIX_QT5_TMP/$qtPluginPrefix/styles/libkvantum.so $out/$qtPluginPrefix/styles/libkvantum.so + postPatch = '' + # Fix plugin dir + substituteInPlace style/style.pro \ + --replace "\$\$[QT_INSTALL_PLUGINS]" "$out/$qtPluginPrefix" ''; meta = with stdenv.lib; { description = "SVG-based Qt5 theme engine plus a config tool and extra themes"; homepage = "https://github.com/tsujan/Kvantum"; - license = licenses.gpl2; + license = licenses.gpl3; platforms = platforms.linux; maintainers = [ maintainers.bugworm ]; }; diff --git a/pkgs/development/libraries/rapidjson/default.nix b/pkgs/development/libraries/rapidjson/default.nix index 8e6b3b44491e..a1671aa3e0f9 100644 --- a/pkgs/development/libraries/rapidjson/default.nix +++ b/pkgs/development/libraries/rapidjson/default.nix @@ -13,14 +13,16 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig cmake ]; - # detected by gcc7 - NIX_CFLAGS_COMPILE = [ "-Wno-error=implicit-fallthrough" ]; + preConfigure = '' + substituteInPlace CMakeLists.txt --replace "-Werror" "" + substituteInPlace example/CMakeLists.txt --replace "-Werror" "" + ''; meta = with lib; { description = "Fast JSON parser/generator for C++ with both SAX/DOM style API"; homepage = "http://rapidjson.org/"; license = licenses.mit; - platforms = platforms.linux; + platforms = platforms.unix; maintainers = with maintainers; [ cstrahan ]; }; } diff --git a/pkgs/desktops/gnome-3/desktop/rarian/default.nix b/pkgs/development/libraries/rarian/default.nix index 484e58568721..484e58568721 100644 --- a/pkgs/desktops/gnome-3/desktop/rarian/default.nix +++ b/pkgs/development/libraries/rarian/default.nix diff --git a/pkgs/development/libraries/rdkafka/default.nix b/pkgs/development/libraries/rdkafka/default.nix index b0e43e08653f..a1af43748430 100644 --- a/pkgs/development/libraries/rdkafka/default.nix +++ b/pkgs/development/libraries/rdkafka/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, zlib, perl, pkgconfig, python }: +{ stdenv, fetchFromGitHub, zlib, perl, pkgconfig, python, openssl }: stdenv.mkDerivation rec { name = "rdkafka-${version}"; @@ -12,12 +12,10 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ zlib perl python ]; + buildInputs = [ zlib perl python openssl ]; NIX_CFLAGS_COMPILE = "-Wno-error=strict-overflow"; - configureFlags = stdenv.lib.optionals stdenv.isDarwin [ "--disable-ssl" ]; - postPatch = '' patchShebangs . ''; diff --git a/pkgs/development/libraries/rocksdb/default.nix b/pkgs/development/libraries/rocksdb/default.nix index 0951c113e3f1..bb36d942a69b 100644 --- a/pkgs/development/libraries/rocksdb/default.nix +++ b/pkgs/development/libraries/rocksdb/default.nix @@ -15,18 +15,19 @@ let malloc = if jemalloc != null then jemalloc else gperftools; + tools = [ "sst_dump" "ldb" "rocksdb_dump" "rocksdb_undump" "blob_dump" ]; in stdenv.mkDerivation rec { name = "rocksdb-${version}"; - version = "5.10.3"; + version = "5.11.3"; - outputs = [ "dev" "out" "static" ]; + outputs = [ "dev" "out" "static" "bin" ]; src = fetchFromGitHub { owner = "facebook"; repo = "rocksdb"; rev = "v${version}"; - sha256 = "19d8i8map8qz639mhflmxc0w9gp78fvkq1l46y5s6b5imwh0w7xq"; + sha256 = "15x2r7aib1xinwcchl32wghs8g96k4q5xgv6z97mxgp35475x01p"; }; nativeBuildInputs = [ which perl ]; @@ -55,7 +56,7 @@ stdenv.mkDerivation rec { buildFlags = buildAndInstallFlags ++ [ "shared_lib" "static_lib" - ]; + ] ++ tools ; installFlags = buildAndInstallFlags ++ [ "INSTALL_PATH=\${out}" @@ -69,6 +70,9 @@ stdenv.mkDerivation rec { cat make_config.mk mkdir -pv $static/lib/ mv -vi $out/lib/${LIBNAME}.a $static/lib/ + + install -d ''${!outputBin}/bin + install -D ${stdenv.lib.concatStringsSep " " tools} ''${!outputBin}/bin ''; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/schroedinger/default.nix b/pkgs/development/libraries/schroedinger/default.nix index 2309719c2bdc..167fe4190764 100644 --- a/pkgs/development/libraries/schroedinger/default.nix +++ b/pkgs/development/libraries/schroedinger/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, orc, pkgconfig }: +{ stdenv, fetchurl, orc, pkgconfig, fetchpatch, autoreconfHook }: stdenv.mkDerivation { name = "schroedinger-1.0.11"; @@ -13,15 +13,23 @@ stdenv.mkDerivation { outputs = [ "out" "dev" "devdoc" ]; - nativeBuildInputs = [ pkgconfig ]; + nativeBuildInputs = [ pkgconfig autoreconfHook ]; buildInputs = [ orc ]; - doCheck = true; + doCheck = (!stdenv.isDarwin); + + patchFlags = "-p0"; + patches = [ + (fetchpatch { + url = "https://raw.githubusercontent.com/macports/macports-ports/master/multimedia/schroedinger/files/patch-testsuite-Makefile.am.diff"; + sha256 = "0cc8ymvgjgwy7ghca2dd8m8pxpinf27s2i8krf2m3fzv2ckq09v3"; + }) + ]; meta = with stdenv.lib; { homepage = http://diracvideo.org/; maintainers = [ maintainers.spwhitt ]; license = [ licenses.mpl11 licenses.lgpl2 licenses.mit ]; - platforms = platforms.linux; + platforms = platforms.unix; }; } diff --git a/pkgs/development/libraries/science/biology/EBTKS/default.nix b/pkgs/development/libraries/science/biology/EBTKS/default.nix new file mode 100644 index 000000000000..67f868a91a7b --- /dev/null +++ b/pkgs/development/libraries/science/biology/EBTKS/default.nix @@ -0,0 +1,28 @@ +{ stdenv, fetchFromGitHub, cmake, libminc }: + +stdenv.mkDerivation rec { + pname = "EBTKS"; + name = "${pname}-2017-09-23"; + + src = fetchFromGitHub { + owner = "BIC-MNI"; + repo = pname; + rev = "67e4e197d8a32d6462c9bdc7af44d64ebde4fb5c"; + sha256 = "1a1qw6i47fs1izx60l1ysabpmyx9j5sjnbdv8b47wi2xcc9i3hpq"; + }; + + nativeBuildInputs = [ cmake ]; + buildInputs = [ libminc ]; + + cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/" ]; + + checkPhase = "ctest --output-on-failure"; # but cmake doesn't run the tests ... + + meta = with stdenv.lib; { + homepage = "https://github.com/BIC-MNI/${pname}"; + description = "Library for working with MINC files"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.unix; + license = licenses.free; + }; +} diff --git a/pkgs/development/libraries/science/biology/bicpl/default.nix b/pkgs/development/libraries/science/biology/bicpl/default.nix new file mode 100644 index 000000000000..d00a74f61e20 --- /dev/null +++ b/pkgs/development/libraries/science/biology/bicpl/default.nix @@ -0,0 +1,33 @@ +{ stdenv, fetchFromGitHub, cmake, libminc, netpbm }: + +stdenv.mkDerivation rec { + pname = "bicpl"; + name = "${pname}-2017-09-10"; + + owner = "BIC-MNI"; + + # current master is significantly ahead of most recent release, so use Git version: + src = fetchFromGitHub { + inherit owner; + repo = pname; + rev = "612a63e740fadb162fcf27ee00da6a18dec4d5a9"; + sha256 = "1vv9gi184bkvp3f99v9xmmw1ly63ip5b09y7zdjn39g7kmwzrga7"; + }; + + nativeBuildInputs = [ cmake ]; + buildInputs = [ libminc netpbm ]; + + cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib" "-DBUILD_TESTING=FALSE" ]; + + checkPhase = "ctest --output-on-failure"; + doCheck = false; + # internal_volume_io.h: No such file or directory + + meta = with stdenv.lib; { + homepage = "https://github.com/${owner}/${pname}"; + description = "Brain Imaging Centre programming library"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.unix; + license = licenses.free; + }; +} diff --git a/pkgs/development/libraries/science/biology/elastix/default.nix b/pkgs/development/libraries/science/biology/elastix/default.nix index 06550372ba8a..7b9e6b24d418 100644 --- a/pkgs/development/libraries/science/biology/elastix/default.nix +++ b/pkgs/development/libraries/science/biology/elastix/default.nix @@ -1,22 +1,18 @@ -{ stdenv, fetchFromGitHub, cmake, itk, python }: +{ stdenv, fetchurl, cmake, itk, python }: stdenv.mkDerivation rec { - _name = "elastix"; - _version = "4.8"; - name = "${_name}-${_version}"; + pname = "elastix"; + pversion = "4.9.0"; + name = "${pname}-${pversion}"; - src = fetchFromGitHub { - owner = "SuperElastix"; - repo = "elastix"; - rev = "ef057ff89233822b26b04b31c3c043af57d5deff"; - sha256 = "0gm3a8dgqww50h6zld9ighjk92wlpybpimjwfz4s5h82vdjsvxrm"; + src = fetchurl { + url = "https://github.com/SuperElastix/${pname}/archive/${pversion}.tar.gz"; + sha256 = "02pbln36nq98xxfyqwlxg7b6gmigdq4fgfqr9mym1qn58aj04shg"; }; nativeBuildInputs = [ cmake python ]; buildInputs = [ itk ]; - cmakeFlags = [ "-DUSE_KNNGraphAlphaMutualInformationMetric=OFF" ]; - checkPhase = "ctest"; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/science/biology/oobicpl/default.nix b/pkgs/development/libraries/science/biology/oobicpl/default.nix new file mode 100644 index 000000000000..8755b7fd2eba --- /dev/null +++ b/pkgs/development/libraries/science/biology/oobicpl/default.nix @@ -0,0 +1,31 @@ +{ stdenv, fetchFromGitHub, cmake, libminc, bicpl, arguments, pcre-cpp }: + +stdenv.mkDerivation rec { + pname = "oobicpl"; + name = "${pname}-2016-03-02"; + + owner = "BIC-MNI"; + + src = fetchFromGitHub { + inherit owner; + repo = pname; + rev = "bc062a65dead2e58461f5afb37abedfa6173f10c"; + sha256 = "05l4ml9djw17bgdnrldhcxydrzkr2f2scqlyak52ph5azj5n4zsx"; + }; + + nativeBuildInputs = [ cmake ]; + buildInputs = [ libminc bicpl arguments pcre-cpp ]; + + cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib" + "-DBICPL_DIR=${bicpl}/lib" + "-DARGUMENTS_DIR=${arguments}/lib" + "-DOOBICPL_BUILD_SHARED_LIBS=TRUE" ]; + + meta = with stdenv.lib; { + homepage = "https://github.com/${owner}/${pname}"; + description = "Brain Imaging Centre object-oriented programming library (and tools)"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.unix; + license = licenses.free; + }; +} diff --git a/pkgs/development/libraries/science/math/clblas/default.nix b/pkgs/development/libraries/science/math/clblas/default.nix index 40b02d303417..7a653a58eb2a 100644 --- a/pkgs/development/libraries/science/math/clblas/default.nix +++ b/pkgs/development/libraries/science/math/clblas/default.nix @@ -7,6 +7,7 @@ , python , ocl-icd , opencl-headers +, Accelerate, CoreGraphics, CoreVideo, OpenCL , gtest }: @@ -40,11 +41,19 @@ stdenv.mkDerivation rec { gfortran blas python - ocl-icd - opencl-headers boost gtest - ]; + ] ++ stdenv.lib.optionals (!stdenv.isDarwin) [ + ocl-icd + opencl-headers + ] ++ stdenv.lib.optionals stdenv.isDarwin [ + Accelerate + CoreGraphics + CoreVideo + ]; + propagatedBuildInputs = stdenv.lib.optionals stdenv.isDarwin [ + OpenCL + ]; enableParallelBuilding = true; @@ -56,7 +65,7 @@ stdenv.mkDerivation rec { ''; license = licenses.asl20; maintainers = with maintainers; [ artuuge ]; - platforms = platforms.linux; + platforms = platforms.unix; }; } diff --git a/pkgs/development/libraries/science/math/cliquer/default.nix b/pkgs/development/libraries/science/math/cliquer/default.nix new file mode 100644 index 000000000000..2441aff9fa30 --- /dev/null +++ b/pkgs/development/libraries/science/math/cliquer/default.nix @@ -0,0 +1,38 @@ +{ stdenv +, fetchFromGitHub +, autoreconfHook +}: + +stdenv.mkDerivation rec { + version = "1.21"; + name = "cliquer-${version}"; + + # autotoolized version of the original cliquer + src = fetchFromGitHub { + owner = "dimpase"; + repo = "autocliquer"; + rev = "v${version}"; + sha256 = "180i4qj1a25qfp75ig2d3144xfpb1dgcgpha0iqqghd7di4awg7z"; + }; + + doCheck = true; + + buildInputs = [ + autoreconfHook + ]; + + meta = with stdenv.lib; { + homepage = https://users.aalto.fi/~pat/cliquer.html; + downloadPage = src.meta.homepage; # autocliquer + description = "Routines for clique searching"; + longDescription = '' + Cliquer is a set of C routines for finding cliques in an arbitrary weighted graph. + It uses an exact branch-and-bound algorithm developed by Patric Östergård. + It is designed with the aim of being efficient while still being flexible and + easy to use. + ''; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ timokau ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/libraries/science/math/flintqs/default.nix b/pkgs/development/libraries/science/math/flintqs/default.nix new file mode 100644 index 000000000000..2891429c8578 --- /dev/null +++ b/pkgs/development/libraries/science/math/flintqs/default.nix @@ -0,0 +1,40 @@ +{ stdenv +, fetchFromGitHub +, autoreconfHook +, gmp +}: + +stdenv.mkDerivation rec { + version = "1.0"; + pname = "flintqs"; + name = "${pname}-${version}"; + + src = fetchFromGitHub { + owner = "sagemath"; + repo = "FlintQS"; + rev = "v${version}"; + sha256 = "1f0lnayz6j6qgasx8pbq61d2fqam0wwhsmh6h15l4vq58l1vvbwj"; + }; + + preAutoreconf = '' + touch ChangeLog + ''; + + buildInputs = [ + gmp + ]; + + nativeBuildInputs = [ + autoreconfHook + ]; + + doCheck = true; + + meta = with stdenv.lib; { + homepage = https://github.com/sagemath/FlintQS; + description = "Highly optimized multi-polynomial quadratic sieve for integer factorization"; + license = with licenses; [ gpl2 ]; + maintainers = with maintainers; [ timokau ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/development/libraries/science/math/lcalc/default.nix b/pkgs/development/libraries/science/math/lcalc/default.nix new file mode 100644 index 000000000000..90393cff001c --- /dev/null +++ b/pkgs/development/libraries/science/math/lcalc/default.nix @@ -0,0 +1,78 @@ +{ stdenv +, fetchurl +, fetchpatch +, pari +}: + +stdenv.mkDerivation rec { + version = "1.23"; + pname = "lcalc"; + name = "${pname}-${version}"; + + src = fetchurl { + # original at http://oto.math.uwaterloo.ca/~mrubinst/L_function_public/CODE/L-${version}.tar.gz, no longer available + # "newer" version at google code https://code.google.com/archive/p/l-calc/source/default/source + url = "http://mirrors.mit.edu/sage/spkg/upstream/lcalc/lcalc-${version}.tar.bz2"; + sha256 = "1c6dsdshgxhqppjxvxhp8yhpxaqvnz3d1mlh26r571gkq8z2bm43"; + }; + + preConfigure = "cd src"; + + buildInputs = [ + pari + ]; + + patches = [ + # Port to newer pari + (fetchpatch { + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/lcalc/patches/pari-2.7.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "1x3aslldm8njjm7p9g9s9w2c91kphnci2vpkxkrcxfihw3ayss6c"; + }) + + # Uncomment the definition of lcalc_to_double(const long double& x). + # (Necessary for GCC >= 4.6.0, cf. https://trac.sagemath.org/ticket/10892) + (fetchpatch { + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/lcalc/patches/Lcommon.h.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "0g4ybvsrcv48rmlh1xjnkms19jp25k58azv6ds1f2cm34hxs8fdx"; + }) + + # Include also <time.h> in Lcommandline_numbertheory.h (at least required + # on Cygwin, cf. https://trac.sagemath.org/ticket/9845) + (fetchpatch { + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/lcalc/patches/time.h.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "1brf04n11kkc43ylagf8dm32j5r2g9zv51dp5wag1mpm4p04l7cl"; + }) + + # Fix for gcc >4.6 + (fetchpatch { + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/lcalc/patches/lcalc-1.23_default_parameters_1.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "0i2yvxm5fx4z0v6m4srgh8rj98kijmlvyirlxf1ky0bp2si6bpka"; + }) + + # gcc 5.1 + (fetchpatch { + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/lcalc/patches/lcalc-1.23_default_parameters_2.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "0dqwmxpm9wb53qbypsyfkgsvk2f8nf67sydphd4dkc2vw4yz6vlh"; + }) + + # based on gentoos makefile patch -- fix paths, adhere to flags + ./makefile.patch + ]; + + installFlags = [ + "DESTDIR=$(out)" + ]; + + makeFlags = [ + "PARI_DEFINE=-DINCLUDE_PARI" + "PARI_PREFIX=${pari}" + ]; + + meta = with stdenv.lib; { + homepage = http://oto.math.uwaterloo.ca/~mrubinst/L_function_public/L.html; + description = "A program for calculating with L-functions"; + license = with licenses; [ gpl2 ]; + maintainers = with maintainers; [ timokau ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/development/libraries/science/math/lcalc/makefile.patch b/pkgs/development/libraries/science/math/lcalc/makefile.patch new file mode 100644 index 000000000000..f55bbe3f24fa --- /dev/null +++ b/pkgs/development/libraries/science/math/lcalc/makefile.patch @@ -0,0 +1,113 @@ +diff --git a/src/Makefile b/src/Makefile +index 84e4e88..56ca676 100644 +--- a/src/Makefile ++++ b/src/Makefile +@@ -58,7 +58,7 @@ ifeq ($(G5),TRUE) + #MACHINE_SPECIFIC_FLAGS = -mpowerpc -mpowerpc64 -m64 + endif + +-CCFLAGS = -Wa,-W -O3 $(OPENMP_FLAG) -Wno-deprecated $(PREPROCESSOR_DEFINE) $(MACHINE_SPECIFIC_FLAGS) $(EXTRA) ++CCFLAGS = $(CXXFLAGS) $(OPENMP_FLAG) $(PREPROCESSOR_DEFINE) $(MACHINE_SPECIFIC_FLAGS) + #CCFLAGS = -Wa,-W -O3 $(OPENMP_FLAG) $(PREPROCESSOR_DEFINE) $(MACHINE_SPECIFIC_FLAGS) $(EXTRA) + #CCFLAGS = -Wa,-W -O2 -fno-exceptions -Wno-deprecated $(PREPROCESSOR_DEFINE) $(MACHINE_SPECIFIC_FLAGS) $(EXTRA) + +@@ -68,12 +68,12 @@ CCFLAGS = -Wa,-W -O3 $(OPENMP_FLAG) -Wno-deprecated $(PREPROCESSOR_DEFINE) $(MA + + ifeq ($(PARI_DEFINE),-DINCLUDE_PARI) + #location of pari.h. +- LOCATION_PARI_H = /usr/local/include/pari #usual location ++ LOCATION_PARI_H = $(PARI_PREFIX)/include/pari #usual location + + #location of libpari.a or of libpari.so + #depending on whether static or dynamic libraries are being used. + #On mac os x it's the former, on linux I think usually the latter. +- LOCATION_PARI_LIBRARY = /usr/local/lib #usual location ++ LOCATION_PARI_LIBRARY = $(PARI_PREFIX)/lib #usual location + else + #supplied as a dummy so as to avoid more ifeq's below + LOCATION_PARI_H = . +@@ -89,24 +89,24 @@ INCLUDEFILES= -I../include + + ifeq ($(OS_NAME),Darwin) + LDFLAGS2 = +- DYN_OPTION=dynamiclib ++ DYN_OPTION=-dynamiclib + else +- LDFLAGS1 = -Xlinker -export-dynamic #not sure why pari calls these when linking but on the web I found ++ LDFLAGS1 = #not sure why pari calls these when linking but on the web I found + #'Libtool provides the `-export-dynamic' link flag (see section Link mode), which does this declaration. + #You need to use this flag if you are linking a shared library that will be dlopened' + #see notes below + #ifeq ($(PARI_DEFINE),-DINCLUDE_PARI) +- LDFLAGS2 = $(LDFLAGS1) -Xlinker -rpath -Xlinker $(LOCATION_PARI_LIBRARY) ++ LDFLAGS2 = $(LDFLAGS) + #else + # LDFLAGS2 = $(LDFLAGS1) + #endif +- DYN_OPTION=shared ++ DYN_OPTION=$(LDFLAGS) -shared -Wl,-soname,libLfunction.so + endif + + ifeq ($(PARI_DEFINE),-DINCLUDE_PARI) +- LDFLAGS = $(LDFLAGS2) -L$(LOCATION_PARI_LIBRARY) -lpari ++ MYLDFLAGS = $(LDFLAGS2) -L$(LOCATION_PARI_LIBRARY) -lpari + else +- LDFLAGS = $(LDFLAGS2) ++ MYLDFLAGS = $(LDFLAGS2) + endif + + +@@ -129,7 +129,8 @@ endif + #become clear which libraries the computer can find. + + +-INSTALL_DIR= /usr/local ++INSTALL_DIR= $(DESTDIR) ++LIB_DIR ?=lib + + #object files for the libLfunction library + OBJ_L = Lglobals.o Lgamma.o Lriemannsiegel.o Lriemannsiegel_blfi.o Ldokchitser.o +@@ -141,9 +142,8 @@ OBJECTS = $(OBJ3) + + all: + # make print_vars +- make libLfunction.so +- make lcalc +- make examples ++ ${MAKE} libLfunction.so ++ ${MAKE} lcalc + # make find_L + # make test + +@@ -151,7 +151,7 @@ print_vars: + @echo OS_NAME = $(OS_NAME) + + lcalc: $(OBJECTS) +- $(CC) $(CCFLAGS) $(INCLUDEFILES) $(OBJECTS) $(LDFLAGS) -o lcalc $(GMP_FLAGS) ++ $(CC) $(CCFLAGS) $(INCLUDEFILES) $(OBJECTS) $(MYLDFLAGS) -o lcalc $(GMP_FLAGS) + + examples: + $(CC) $(CCFLAGS) $(INCLUDEFILES) example_programs/example.cc libLfunction.so -o example_programs/example $(GMP_FLAGS) +@@ -262,15 +262,18 @@ Lcommandline.o: ../include/Lcommandline_values_zeros.h + + + libLfunction.so: $(OBJ_L) +- g++ -$(DYN_OPTION) -o libLfunction.so $(OBJ_L) ++ g++ $(DYN_OPTION) -o libLfunction.so $(OBJ_L) + + clean: + rm -f *.o lcalc libLfunction.so example_programs/example + + install: +- cp -f lcalc $(INSTALL_DIR)/bin/. +- cp -f libLfunction.so $(INSTALL_DIR)/lib/. +- cp -rf ../include $(INSTALL_DIR)/include/Lfunction ++ install -d $(INSTALL_DIR)/bin ++ install -d $(INSTALL_DIR)/$(LIB_DIR) ++ install -d $(INSTALL_DIR)/include/libLfunction ++ install lcalc $(INSTALL_DIR)/bin ++ install libLfunction.so $(INSTALL_DIR)/$(LIB_DIR) ++ install -m 644 -t $(INSTALL_DIR)/include/libLfunction ../include/*.h + + + SRCS = Lcommandline.cc Lcommandline_elliptic.cc Lcommandline_globals.cc Lcommandline_misc.cc Lcommandline_numbertheory.cc Lcommandline_twist.cc Lcommandline_values_zeros.cc Lgamma.cc Lglobals.cc Lmisc.cc Lriemannsiegel.cc Lriemannsiegel_blfi.cc cmdline.c diff --git a/pkgs/development/libraries/science/math/m4rie/default.nix b/pkgs/development/libraries/science/math/m4rie/default.nix new file mode 100644 index 000000000000..23fc03655cf3 --- /dev/null +++ b/pkgs/development/libraries/science/math/m4rie/default.nix @@ -0,0 +1,39 @@ +{ stdenv +, fetchFromBitbucket +, autoreconfHook +, m4ri +}: + +stdenv.mkDerivation rec { + version = "20150908"; + name = "m4rie-${version}"; + + src = fetchFromBitbucket { + owner = "malb"; + repo = "m4rie"; + rev = "release-${version}"; + sha256 = "0r8lv46qx5mkz5kp3ay2jnsp0mbhlqr5z2z220wdk73wdshcznss"; + }; + + doCheck = true; + + buildInputs = [ + m4ri + ]; + + nativeBuildInputs = [ + autoreconfHook + ]; + + meta = with stdenv.lib; { + homepage = https://malb.bitbucket.io/m4rie/; + description = "Library for matrix multiplication, reduction and inversion over GF(2^k) for 2 <= k <= 10"; + longDescription = '' + M4RIE is a library for fast arithmetic with dense matrices over small finite fields of even characteristic. + It uses the M4RI library, implementing the same operations over the finite field F2. + ''; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ timokau ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/libraries/science/math/planarity/default.nix b/pkgs/development/libraries/science/math/planarity/default.nix new file mode 100644 index 000000000000..7394fb9e1b41 --- /dev/null +++ b/pkgs/development/libraries/science/math/planarity/default.nix @@ -0,0 +1,40 @@ +{ stdenv +, fetchFromGitHub +, fetchpatch +, autoreconfHook +}: + +stdenv.mkDerivation rec { + pname = "planarity"; + version = "3.0.0.5"; + name = "${pname}-${version}"; + + src = fetchFromGitHub { + owner = "graph-algorithms"; + repo = "edge-addition-planarity-suite"; + rev = "Version_${version}"; + sha256 = "01cm7ay1njkfsdnmnvh5zwc7wg7x189hq1vbfhh9p3ihrbnmqzh8"; + }; + + nativeBuildInputs = [ + autoreconfHook + ]; + + doCheck = true; + + patches = [ + # declare variables declared in headers as extern, not yet merged upstream + (fetchpatch { + url = "https://github.com/graph-algorithms/edge-addition-planarity-suite/pull/3.patch"; + sha256 = "1nqjc4clr326imz4jxqxcxv2hgh1sjgzll27k5cwkdin8lnmmil8"; + }) + ]; + + meta = with stdenv.lib; { + homepage = https://github.com/graph-algorithms/edge-addition-planarity-suite; + description = "A library for implementing graph algorithms"; + license = licenses.bsd3; + maintainers = with maintainers; [ timokau ]; + platforms = platforms.unix; + }; +} diff --git a/pkgs/development/libraries/science/math/rankwidth/default.nix b/pkgs/development/libraries/science/math/rankwidth/default.nix new file mode 100644 index 000000000000..f38fce5831ee --- /dev/null +++ b/pkgs/development/libraries/science/math/rankwidth/default.nix @@ -0,0 +1,28 @@ +{ stdenv +, fetchurl +}: + +stdenv.mkDerivation rec { + pname = "rankwidth"; + version = "0.7"; + name = "${pname}-${version}"; + + src = fetchurl { + url = "http://mirrors.mit.edu/sage/spkg/upstream/rw/rw-${version}.tar.gz"; + sha256 = "1rv2v42x2506x7f10349m1wpmmfxrv9l032bkminni2gbip9cjg0"; + }; + + configureFlags = [ + "--enable-executable=no" # no igraph dependency + ]; + + # check phase is empty for now (as of version 0.7) + doCheck = true; + + meta = with stdenv.lib; { + description = "Calculates rank-width and rank-decompositions"; + license = with licenses; [ gpl2Plus ]; + maintainers = with maintainers; [ timokau ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/libraries/science/math/rubiks/default.nix b/pkgs/development/libraries/science/math/rubiks/default.nix new file mode 100644 index 000000000000..5b20948686b4 --- /dev/null +++ b/pkgs/development/libraries/science/math/rubiks/default.nix @@ -0,0 +1,82 @@ +{ stdenv +, fetchurl +, fetchpatch +, coreutils +}: + +stdenv.mkDerivation rec { + pname = "rubiks"; + version = "20070912"; + name = "${pname}-${version}"; + + src = fetchurl { + url = "http://mirrors.mit.edu/sage/spkg/upstream/rubiks/rubiks-${version}.tar.bz2"; + sha256 = "0zdmkb0j1kyspdpsszzb2k3279xij79jkx0dxd9f3ix1yyyg3yfq"; + }; + + preConfigure = '' + export INSTALL="${coreutils}/bin/install" + ''; + + # everything is done in `make install` + buildPhase = "true"; + + installFlags = [ + "PREFIX=$out" + ]; + + patches = [ + # Fix makefiles which use all the variables in all the wrong ways and + # hardcode values for some variables. + (fetchpatch { + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/rubiks/patches/dietz-cu2-Makefile.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "1ry3w1mk9q4jqd91zlaa1bdiiplld4hpfjaldbhlmzlgrrc99qmq"; + }) + (fetchpatch { + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/rubiks/patches/dietz-mcube-Makefile.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "0zsbh6k3kqdg82fv0kzghr1x7pafisv943gmssqscp107bhg77bz"; + }) + (fetchpatch { + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/rubiks/patches/dietz-solver-Makefile.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "0vhw70ylnmydgjhwx8jjlb2slccj4pfqn6vzirkyz1wp8apsmfhp"; + }) + (fetchpatch { + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/rubiks/patches/reid-Makefile.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "1r311sn012xs135s0d21qwsig2kld7rdcq19nm0zbnklviid57df"; + }) + ]; + + meta = with stdenv.lib; { + homepage = https://wiki.sagemath.org/spkg/rubiks; + description = "Several programs for working with Rubik's cubes"; + # The individual websites are no longer available + longDescription = '' + There are several programs for working with Rubik's cubes, by three + different people. Look inside the directories under /src to see + specific info and licensing. In summary the three contributers are: + + + Michael Reid (GPL) http://www.math.ucf.edu/~reid/Rubik/optimal_solver.html + optimal - uses many pre-computed tables to find an optimal + solution to the 3x3x3 Rubik's cube + + + Dik T. Winter (MIT License) + cube - uses Kociemba's algorithm to iteratively find a short + solution to the 3x3x3 Rubik's cube + size222 - solves a 2x2x2 Rubik's cube + + + Eric Dietz (GPL) http://www.wrongway.org/?rubiksource + cu2 - A fast, non-optimal 2x2x2 solver + cubex - A fast, non-optimal 3x3x3 solver + mcube - A fast, non-optimal 4x4x4 solver + ''; + license = with licenses; [ + gpl2 # Michael Reid's and Eric Dietz software + mit # Dik T. Winter's software + ]; + maintainers = with maintainers; [ timokau ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/libraries/science/math/sympow/default.nix b/pkgs/development/libraries/science/math/sympow/default.nix new file mode 100644 index 000000000000..fd677f5c0b7b --- /dev/null +++ b/pkgs/development/libraries/science/math/sympow/default.nix @@ -0,0 +1,89 @@ +{ stdenv +, fetchurl +, fetchpatch +, makeWrapper +}: + +stdenv.mkDerivation rec { + version = "1.018.1"; + name = "sympow-${version}"; + + src = fetchurl { + # Original website no longer reachable + url = "http://mirrors.mit.edu/sage/spkg/upstream/sympow/sympow-${version}.tar.bz2"; + sha256 = "0hphs7ia1wr5mydf288zvwj4svrymfpadcg3pi6w80km2yg5bm3c"; + }; + + nativeBuildInputs = [ + makeWrapper + ]; + + configurePhase = '' + runHook preConfigure + ./Configure # doesn't take any options + runHook postConfigure + ''; + + installPhase = '' + runHook preInstall + install -d datafiles "$out/share/sympow/datafiles" + install *.gp "$out/share/sympow/" + install -Dm755 sympow "$out/share/sympow/sympow" + install -D new_data "$out/bin/new_data" + + makeWrapper "$out/share/sympow/sympow" "$out/bin/sympow" \ + --run 'export SYMPOW_LOCAL="$HOME/.local/share/sympow"' \ + --run 'if [ ! -d "$SYMPOW_LOCAL" ]; then + mkdir -p "$SYMPOW_LOCAL" + cp -r ${placeholder "out"}/share/sympow/* "$SYMPOW_LOCAL" + chmod -R +xw "$SYMPOW_LOCAL" + fi' \ + --run 'cd "$SYMPOW_LOCAL"' + runHook postInstall + ''; + + patches = [ + # don't hardcode paths + (fetchpatch { + name = "do_not_hardcode_paths.patch"; + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/sympow/patches/Configure.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "1611p8ra8zkxvmxn3gm2l64bd4ma4m6r4vd6vwswcic91k1fci04"; + }) + + # bug on some platforms in combination with a newer gcc: + # https://trac.sagemath.org/ticket/11920 + (fetchpatch { + name = "fix_newer_gcc1.patch"; + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/sympow/patches/fpu.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "14gfa56w3ddfmd4d5ir9a40y2zi43cj1i4d2l2ij9l0qlqdy9jyx"; + }) + (fetchpatch { + name = "fix_newer_gcc2.patch"; + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/sympow/patches/execlp.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "190gqhgz9wgw4lqwz0nwb1izc9zffx34bazsiw2a2sz94bmgb54v"; + }) + + # fix pointer initialization bug (https://trac.sagemath.org/ticket/22862) + (fetchpatch { + name = "fix_pointer_initialization1.patch"; + url = "https://git.sagemath.org/sage.git/plain/build/pkgs/sympow/patches/initialize-tacks.patch?id=07d6c37d18811e2b377a9689790a7c5e24da16ba"; + sha256 = "02341vdbbidfs39s26vi4n5wigz619sw8fdbl0h9qsmwwhscgf85"; + }) + (fetchpatch { + name = "fix_pointer_initialization2.patch"; + url = "https://git.archlinux.org/svntogit/community.git/plain/trunk/sympow-datafiles.patch?h=packages/sympow"; + sha256 = "1m0vz048layb47r1jjf7fplw650ccc9x0w3l322iqmppzmv3022a"; + }) + ]; + + meta = with stdenv.lib; { + description = "A package to compute special values of symmetric power elliptic curve L-functions"; + license = { + shortName = "sympow"; + fullName = "Custom, BSD-like. See COPYING file."; + free = true; + }; + maintainers = with maintainers; [ timokau ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/development/libraries/science/math/zn_poly/default.nix b/pkgs/development/libraries/science/math/zn_poly/default.nix new file mode 100644 index 000000000000..bc322d4c5341 --- /dev/null +++ b/pkgs/development/libraries/science/math/zn_poly/default.nix @@ -0,0 +1,50 @@ +{ stdenv +, fetchurl +, gmp +, python2 +}: + +stdenv.mkDerivation rec { + version = "0.9"; + pname = "zn_poly"; + name = "${pname}-${version}"; + + src = fetchurl { + url = "http://web.maths.unsw.edu.au/~davidharvey/code/zn_poly/releases/zn_poly-${version}.tar.gz"; + sha256 = "1kxl25av7i3v68k32hw5bayrfcvmahmqvs97mlh9g238gj4qb851"; + }; + + buildInputs = [ + gmp + ]; + + nativeBuildInputs = [ + python2 # needed by ./configure to create the makefile + ]; + + libname = "libzn_poly${stdenv.targetPlatform.extensions.sharedLibrary}"; + + # Tuning (either autotuning or with hand-written paramters) is possible + # but not implemented here. + # It seems buggy anyways (see homepage). + buildFlags = [ "all" libname ]; + + + # `make install` fails to install some header files and the lib file. + installPhase = '' + mkdir -p "$out/include/zn_poly" + mkdir -p "$out/lib" + cp "${libname}" "$out/lib" + cp include/*.h "$out/include/zn_poly" + ''; + + doCheck = true; + + meta = with stdenv.lib; { + homepage = http://web.maths.unsw.edu.au/~davidharvey/code/zn_poly/; + description = "Polynomial arithmetic over Z/nZ"; + license = with licenses; [ gpl3 ]; + maintainers = with maintainers; [ timokau ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/libraries/talloc/default.nix b/pkgs/development/libraries/talloc/default.nix index 8b06e3f2e096..1d6818276eb8 100644 --- a/pkgs/development/libraries/talloc/default.nix +++ b/pkgs/development/libraries/talloc/default.nix @@ -3,11 +3,11 @@ }: stdenv.mkDerivation rec { - name = "talloc-2.1.11"; + name = "talloc-2.1.12"; src = fetchurl { url = "mirror://samba/talloc/${name}.tar.gz"; - sha256 = "1lzfxv2zjxap5snf9ydl1bqgjpz0kgkq7n644f8rkbx0arav77k3"; + sha256 = "0jv0ri9vj93fczzgl7rn7xvnfgl2kfx4x85cr8h8v52yh7v0qz4q"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/libraries/v8/3.16.14.nix b/pkgs/development/libraries/v8/3.16.14.nix index 73f5febb6685..e1a9336e3a56 100644 --- a/pkgs/development/libraries/v8/3.16.14.nix +++ b/pkgs/development/libraries/v8/3.16.14.nix @@ -3,10 +3,10 @@ assert readline != null; let - arch = if stdenv.isArm + arch = if stdenv.isAarch32 then (if stdenv.is64bit then "arm64" else "arm") else (if stdenv.is64bit then "x64" else "ia32"); - armHardFloat = stdenv.isArm && (stdenv.platform.gcc.float or null) == "hard"; + armHardFloat = stdenv.isAarch32 && (stdenv.platform.gcc.float or null) == "hard"; in stdenv.mkDerivation rec { diff --git a/pkgs/development/libraries/v8/6_x.nix b/pkgs/development/libraries/v8/6_x.nix index 4095ff20c2bc..adebedbf2ac1 100644 --- a/pkgs/development/libraries/v8/6_x.nix +++ b/pkgs/development/libraries/v8/6_x.nix @@ -4,7 +4,7 @@ }: let - arch = if stdenv.isArm + arch = if stdenv.isAarch32 then if stdenv.is64bit then"arm64" else "arm" diff --git a/pkgs/development/libraries/v8/default.nix b/pkgs/development/libraries/v8/default.nix index f14ec4fc6084..099794f6623d 100644 --- a/pkgs/development/libraries/v8/default.nix +++ b/pkgs/development/libraries/v8/default.nix @@ -10,7 +10,7 @@ let arch = if stdenv.isx86_64 then "x64" else if stdenv.isi686 then "ia32" else if stdenv.isAarch64 then "arm64" - else if stdenv.isArm then "arm" + else if stdenv.isAarch32 then "arm" else throw "Unknown architecture for v8"; git_url = "https://chromium.googlesource.com"; clangFlag = if stdenv.isDarwin then "1" else "0"; diff --git a/pkgs/development/libraries/webkitgtk/2.20.nix b/pkgs/development/libraries/webkitgtk/2.20.nix index 27524504872e..3cc26b512c89 100644 --- a/pkgs/development/libraries/webkitgtk/2.20.nix +++ b/pkgs/development/libraries/webkitgtk/2.20.nix @@ -15,7 +15,7 @@ assert stdenv.isDarwin -> !enableGtk2Plugins; with stdenv.lib; stdenv.mkDerivation rec { name = "webkitgtk-${version}"; - version = "2.20.0"; + version = "2.20.1"; meta = { description = "Web content rendering engine, GTK+ port"; @@ -28,7 +28,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "http://webkitgtk.org/releases/${name}.tar.xz"; - sha256 = "0g0an3pc2yz13gzpaysfgch2yp510gw1qcpk0xr8m6mx43vl1xjp"; + sha256 = "0nc9dj05dbk31ciip08b3rdsfja7ckc5mgagrj030fafza2k5r23"; }; patches = optionals stdenv.isDarwin [ diff --git a/pkgs/development/libraries/webrtc-audio-processing/default.nix b/pkgs/development/libraries/webrtc-audio-processing/default.nix index b5a3aed91d90..529091518eb6 100644 --- a/pkgs/development/libraries/webrtc-audio-processing/default.nix +++ b/pkgs/development/libraries/webrtc-audio-processing/default.nix @@ -10,7 +10,7 @@ stdenv.mkDerivation rec { # Avoid this error: # signal_processing/filter_ar_fast_q12_armv7.S:88: Error: selected processor does not support `sbfx r11,r6,#12,#16' in ARM mode - patchPhase = stdenv.lib.optionalString stdenv.isArm '' + patchPhase = stdenv.lib.optionalString stdenv.isAarch32 '' substituteInPlace configure --replace 'armv7*|armv8*' 'disabled' '' + stdenv.lib.optionalString stdenv.hostPlatform.isMusl '' substituteInPlace webrtc/base/checks.cc --replace 'defined(__UCLIBC__)' 1 diff --git a/pkgs/development/libraries/wt/default.nix b/pkgs/development/libraries/wt/default.nix index 37819c2a98e3..99f73add795a 100644 --- a/pkgs/development/libraries/wt/default.nix +++ b/pkgs/development/libraries/wt/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, boost165, pkgconfig, doxygen, qt48Full, libharu +{ stdenv, fetchFromGitHub, cmake, boost, pkgconfig, doxygen, qt48Full, libharu , pango, fcgi, firebird, mysql, postgresql, graphicsmagick, glew, openssl , pcre }: @@ -10,7 +10,7 @@ let name = "wt-${version}"; src = fetchFromGitHub { - owner = "kdeforche"; + owner = "emweb"; repo = "wt"; rev = version; inherit sha256; @@ -20,7 +20,7 @@ let nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - cmake boost165 doxygen qt48Full libharu + cmake boost doxygen qt48Full libharu pango fcgi firebird mysql.connector-c postgresql graphicsmagick glew openssl pcre ]; @@ -43,14 +43,12 @@ let }; in { wt3 = generic { - # with the next version update the version pinning of boost should be omitted - version = "3.3.9"; - sha256 = "1mkflhvzzzxkc5yzvr6nk34j0ldpwxjxb6n7xml59h3j3px3ixjm"; + version = "3.3.10"; + sha256 = "1y25mhghgbgjgycpny0x4z95xn98q0wraab1c5gkwnay097bgwdy"; }; wt4 = generic { - # with the next version update the version pinning of boost should be omitted - version = "4.0.2"; - sha256 = "0r729gjd1sy0pcmir2r7ga33mp5cr5b4gvf44852q65hw2577w1x"; + version = "4.0.3"; + sha256 = "01xch5dkpcanwhr515236wa9mdmnq2a2j13dn7smyhwzqgbpknsg"; }; } diff --git a/pkgs/development/libraries/xxHash/default.nix b/pkgs/development/libraries/xxHash/default.nix index d702500bf719..cbe32da64457 100644 --- a/pkgs/development/libraries/xxHash/default.nix +++ b/pkgs/development/libraries/xxHash/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "xxHash-${version}"; - version = "0.6.3.20171018"; + version = "0.6.4.20171222"; src = fetchFromGitHub { - sha256 = "0061ivxpx0p24m4vg7kfx9fs9f0jxvv4g76bmyss5gp90p05hc18"; - rev = "333804ccf0c0339451accac023deeab9e5f7c002"; + sha256 = "1az5vm14rdc3pa3l0wj180wpii14if16diril3gz8q9ip1215gwj"; + rev = "7caf8bd76440c75dfe1070d3acfbd7891aea8fca"; repo = "xxHash"; owner = "Cyan4973"; }; diff --git a/pkgs/development/lisp-modules/quicklisp-to-nix-overrides.nix b/pkgs/development/lisp-modules/quicklisp-to-nix-overrides.nix index 0c12f169cf7b..111d99527498 100644 --- a/pkgs/development/lisp-modules/quicklisp-to-nix-overrides.nix +++ b/pkgs/development/lisp-modules/quicklisp-to-nix-overrides.nix @@ -158,4 +158,9 @@ $out/lib/common-lisp/query-fs" deps = pkgs.lib.filter (x: x.name != quicklisp-to-nix-packages.buildnode-xhtml.name) x.deps; parasites = pkgs.lib.filter (x: x!= "buildnode-test") x.parasites; }; + postmodern = x: { + overrides = y : (x.overrides y) // { + meta.broken = true; # 2018-04-10 + }; + }; } diff --git a/pkgs/development/stm32/betaflight/default.nix b/pkgs/development/misc/stm32/betaflight/default.nix index 8d4d0d7f4a2b..8d4d0d7f4a2b 100644 --- a/pkgs/development/stm32/betaflight/default.nix +++ b/pkgs/development/misc/stm32/betaflight/default.nix diff --git a/pkgs/development/mobile/androidenv/build-tools.nix b/pkgs/development/mobile/androidenv/build-tools.nix index c09fd6142703..457a9b6720af 100644 --- a/pkgs/development/mobile/androidenv/build-tools.nix +++ b/pkgs/development/mobile/androidenv/build-tools.nix @@ -1,16 +1,16 @@ {stdenv, stdenv_32bit, fetchurl, unzip, zlib_32bit, ncurses_32bit, file, zlib, ncurses}: stdenv.mkDerivation rec { - version = "26.0.1"; + version = "26.0.2"; name = "android-build-tools-r${version}"; src = if (stdenv.system == "i686-linux" || stdenv.system == "x86_64-linux") then fetchurl { url = "https://dl.google.com/android/repository/build-tools_r${version}-linux.zip"; - sha256 = "1sp0ir1d88ffw0gz78zlbvnxalz02fsaxwdcvjfynanylwjpyqf8"; + sha256 = "1kii880bwhjkc343zwx1ysxyisxhczrwhphnxbwsgi45mjgq8lm7"; } else if stdenv.system == "x86_64-darwin" then fetchurl { url = "https://dl.google.com/android/repository/build-tools_r${version}-macosx.zip"; - sha256 = "1ns6c8361l18s3a5x0jc2m3qr06glsb6ak7csrrw6dkzlv8cj5dk"; + sha256 = "1x0ycprl6hgsm23kck5ind7x00hzydc5k3h3ch4a13407xbpvzvx"; } else throw "System ${stdenv.system} not supported!"; @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { cd $out/build-tools unzip $src mv android-* ${version} - + ${stdenv.lib.optionalString (stdenv.system == "i686-linux" || stdenv.system == "x86_64-linux") '' cd ${version} @@ -48,9 +48,9 @@ stdenv.mkDerivation rec { fi done ''} - + patchShebangs . ''; - + buildInputs = [ unzip file ]; } diff --git a/pkgs/development/mobile/cocoapods/Gemfile b/pkgs/development/mobile/cocoapods/Gemfile new file mode 100644 index 000000000000..8308684860e6 --- /dev/null +++ b/pkgs/development/mobile/cocoapods/Gemfile @@ -0,0 +1,2 @@ +source 'https://rubygems.org' +gem 'cocoapods' diff --git a/pkgs/development/mobile/cocoapods/Gemfile.lock b/pkgs/development/mobile/cocoapods/Gemfile.lock new file mode 100644 index 000000000000..0ab15f1efd2f --- /dev/null +++ b/pkgs/development/mobile/cocoapods/Gemfile.lock @@ -0,0 +1,74 @@ +GEM + remote: https://rubygems.org/ + specs: + CFPropertyList (2.3.6) + activesupport (4.2.10) + i18n (~> 0.7) + minitest (~> 5.1) + thread_safe (~> 0.3, >= 0.3.4) + tzinfo (~> 1.1) + claide (1.0.2) + cocoapods (1.3.1) + activesupport (>= 4.0.2, < 5) + claide (>= 1.0.2, < 2.0) + cocoapods-core (= 1.3.1) + cocoapods-deintegrate (>= 1.0.1, < 2.0) + cocoapods-downloader (>= 1.1.3, < 2.0) + cocoapods-plugins (>= 1.0.0, < 2.0) + cocoapods-search (>= 1.0.0, < 2.0) + cocoapods-stats (>= 1.0.0, < 2.0) + cocoapods-trunk (>= 1.2.0, < 2.0) + cocoapods-try (>= 1.1.0, < 2.0) + colored2 (~> 3.1) + escape (~> 0.0.4) + fourflusher (~> 2.0.1) + gh_inspector (~> 1.0) + molinillo (~> 0.5.7) + nap (~> 1.0) + ruby-macho (~> 1.1) + xcodeproj (>= 1.5.1, < 2.0) + cocoapods-core (1.3.1) + activesupport (>= 4.0.2, < 6) + fuzzy_match (~> 2.0.4) + nap (~> 1.0) + cocoapods-deintegrate (1.0.1) + cocoapods-downloader (1.1.3) + cocoapods-plugins (1.0.0) + nap + cocoapods-search (1.0.0) + cocoapods-stats (1.0.0) + cocoapods-trunk (1.3.0) + nap (>= 0.8, < 2.0) + netrc (~> 0.11) + cocoapods-try (1.1.0) + colored2 (3.1.2) + concurrent-ruby (1.0.5) + escape (0.0.4) + fourflusher (2.0.1) + fuzzy_match (2.0.4) + gh_inspector (1.0.3) + i18n (0.9.1) + concurrent-ruby (~> 1.0) + minitest (5.10.3) + molinillo (0.5.7) + nanaimo (0.2.3) + nap (1.1.0) + netrc (0.11.0) + ruby-macho (1.1.0) + thread_safe (0.3.6) + tzinfo (1.2.4) + thread_safe (~> 0.1) + xcodeproj (1.5.3) + CFPropertyList (~> 2.3.3) + claide (>= 1.0.2, < 2.0) + colored2 (~> 3.1) + nanaimo (~> 0.2.3) + +PLATFORMS + ruby + +DEPENDENCIES + cocoapods + +BUNDLED WITH + 1.14.6 diff --git a/pkgs/development/mobile/cocoapods/default.nix b/pkgs/development/mobile/cocoapods/default.nix new file mode 100644 index 000000000000..56624370b14a --- /dev/null +++ b/pkgs/development/mobile/cocoapods/default.nix @@ -0,0 +1,17 @@ +{ lib, bundlerEnv, ruby }: + +bundlerEnv rec { + inherit ruby; + pname = "cocoapods"; + gemdir = ./.; + + meta = with lib; { + description = "CocoaPods manages dependencies for your Xcode projects."; + homepage = https://github.com/CocoaPods/CocoaPods; + license = licenses.mit; + platforms = platforms.darwin; + maintainers = with maintainers; [ + peterromfeldhk + ]; + }; +} diff --git a/pkgs/development/mobile/cocoapods/gemset.nix b/pkgs/development/mobile/cocoapods/gemset.nix new file mode 100644 index 000000000000..ff7b14e6dd8a --- /dev/null +++ b/pkgs/development/mobile/cocoapods/gemset.nix @@ -0,0 +1,234 @@ +{ + activesupport = { + dependencies = ["i18n" "minitest" "thread_safe" "tzinfo"]; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0s12j8vl8vrxfngkdlz9g8bpz9akq1z42d57mx5r537b2pji8nr7"; + type = "gem"; + }; + version = "4.2.10"; + }; + CFPropertyList = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0hadm41xr1fq3qp74jd9l5q8l0j9083rgklgzsilllwaav7qrrid"; + type = "gem"; + }; + version = "2.3.6"; + }; + claide = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0az54rp691hc42yl1xyix2cxv58byhaaf4gxbpghvvq29l476rzc"; + type = "gem"; + }; + version = "1.0.2"; + }; + cocoapods = { + dependencies = ["activesupport" "claide" "cocoapods-core" "cocoapods-deintegrate" "cocoapods-downloader" "cocoapods-plugins" "cocoapods-search" "cocoapods-stats" "cocoapods-trunk" "cocoapods-try" "colored2" "escape" "fourflusher" "gh_inspector" "molinillo" "nap" "ruby-macho" "xcodeproj"]; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "050b7795jc6802wcpcgi702qkgy8vjidgq6c6mbx2alrq7l0n8q7"; + type = "gem"; + }; + version = "1.3.1"; + }; + cocoapods-core = { + dependencies = ["activesupport" "fuzzy_match" "nap"]; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0pr42lpqs6q51gnnfxmgmbx7sw0dwyawylssj588izj8av18rhpy"; + type = "gem"; + }; + version = "1.3.1"; + }; + cocoapods-deintegrate = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1x4hxlip6zkrs1vcmw7sh45ayn5pxvsg782iifnmgjwn2pyskj7l"; + type = "gem"; + }; + version = "1.0.1"; + }; + cocoapods-downloader = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1664qg1wml70slcfklpnyq5ixp145f6iyn3c6pcqkqc64i1bsg87"; + type = "gem"; + }; + version = "1.1.3"; + }; + cocoapods-plugins = { + dependencies = ["nap"]; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "16na82sfyc8801qs1n22nwq486s4j7yj6rj7fcp8cbxmj371fpbj"; + type = "gem"; + }; + version = "1.0.0"; + }; + cocoapods-search = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "02wmy5rbjk29c65zn62bffxv30qs11slql23qx65snkm0vd93mn6"; + type = "gem"; + }; + version = "1.0.0"; + }; + cocoapods-stats = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0sfcwq2vq6cadj1811jdjys3d28pmk2r2a83px6w94rz6i19axid"; + type = "gem"; + }; + version = "1.0.0"; + }; + cocoapods-trunk = { + dependencies = ["nap" "netrc"]; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0shxr64j7f50yglp5l90vr1ba5p9pkk0a3b8apkbci2lmq5kq60b"; + type = "gem"; + }; + version = "1.3.0"; + }; + cocoapods-try = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1gf2zjmcjhh9psq15yfy82wz5jnlihf5bcw79f8hlv4cnqyspncj"; + type = "gem"; + }; + version = "1.1.0"; + }; + colored2 = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0jlbqa9q4mvrm73aw9mxh23ygzbjiqwisl32d8szfb5fxvbjng5i"; + type = "gem"; + }; + version = "3.1.2"; + }; + concurrent-ruby = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "183lszf5gx84kcpb779v6a2y0mx9sssy8dgppng1z9a505nj1qcf"; + type = "gem"; + }; + version = "1.0.5"; + }; + escape = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0sa1xkfc9jvkwyw1jbz3jhkq0ms1zrvswi6mmfiwcisg5fp497z4"; + type = "gem"; + }; + version = "0.0.4"; + }; + fourflusher = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1dzmkxyzrk475c1yk5zddwhhj28b6fnj4jkk1h5gr1c2mrar72d5"; + type = "gem"; + }; + version = "2.0.1"; + }; + fuzzy_match = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "19gw1ifsgfrv7xdi6n61658vffgm1867f4xdqfswb2b5h6alzpmm"; + type = "gem"; + }; + version = "2.0.4"; + }; + gh_inspector = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1lxvp8xpjd2cazzcp90phy567spp4v41bnk9awgx8absndv70k1x"; + type = "gem"; + }; + version = "1.0.3"; + }; + i18n = { + dependencies = ["concurrent-ruby"]; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "032wbfixfpwa67c893x5sn02ab0928vfqfshcs02bwkkxpqy9x8s"; + type = "gem"; + }; + version = "0.9.1"; + }; + minitest = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "05521clw19lrksqgvg2kmm025pvdhdaniix52vmbychrn2jm7kz2"; + type = "gem"; + }; + version = "5.10.3"; + }; + molinillo = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "19h1nks0x2ljwyijs2rd1f9sh05j8xqvjaqk1rslp5nyy6h4a758"; + type = "gem"; + }; + version = "0.5.7"; + }; + nanaimo = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0z6rbji02x75vm5jw4hbpp75khp4z5yfgbaz1h9l8aa00hqf0fxd"; + type = "gem"; + }; + version = "0.2.3"; + }; + nap = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0xm5xssxk5s03wjarpipfm39qmgxsalb46v1prsis14x1xk935ll"; + type = "gem"; + }; + version = "1.1.0"; + }; + netrc = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0gzfmcywp1da8nzfqsql2zqi648mfnx6qwkig3cv36n9m0yy676y"; + type = "gem"; + }; + version = "0.11.0"; + }; + ruby-macho = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1i9vkz3ki3yvps4z1hca2q2axniq95x4yypnc22p9pcfjdfrbrq6"; + type = "gem"; + }; + version = "1.1.0"; + }; + thread_safe = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0nmhcgq6cgz44srylra07bmaw99f5271l0dpsvl5f75m44l0gmwy"; + type = "gem"; + }; + version = "0.3.6"; + }; + tzinfo = { + dependencies = ["thread_safe"]; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "09dpbrih054mn42flbbcdpzk2727mzfvjrgqb12zdafhx7p9rrzp"; + type = "gem"; + }; + version = "1.2.4"; + }; + xcodeproj = { + dependencies = ["CFPropertyList" "claide" "colored2" "nanaimo"]; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "1gvnd5ixa4wbn1cpc6jp6i9z0dxhcwlxny47irzbr6zr8wpj3ww7"; + type = "gem"; + }; + version = "1.5.3"; + }; +} \ No newline at end of file diff --git a/pkgs/development/mobile/cocoapods/update b/pkgs/development/mobile/cocoapods/update new file mode 100755 index 000000000000..58a7bd4a4539 --- /dev/null +++ b/pkgs/development/mobile/cocoapods/update @@ -0,0 +1,10 @@ +#!/usr/bin/env nix-shell +#! nix-shell -i bash -p bash ruby bundler bundix + +rm Gemfile.lock +bundler install +bundix + +if [ "clean" == "$1" ]; then + rm -rf ~/.gem +fi diff --git a/pkgs/development/node-packages/default-v6.nix b/pkgs/development/node-packages/default-v6.nix index 5fc007bbfd09..2be09eb16324 100644 --- a/pkgs/development/node-packages/default-v6.nix +++ b/pkgs/development/node-packages/default-v6.nix @@ -24,13 +24,13 @@ nodePackages // { phantomjs = nodePackages.phantomjs.override (oldAttrs: { buildInputs = oldAttrs.buildInputs ++ [ pkgs.phantomjs2 ]; }); - + webdrvr = nodePackages.webdrvr.override (oldAttrs: { buildInputs = oldAttrs.buildInputs ++ [ pkgs.phantomjs ]; - + preRebuild = '' mkdir $TMPDIR/webdrvr - + ln -s ${pkgs.fetchurl { url = "https://selenium-release.storage.googleapis.com/2.43/selenium-server-standalone-2.43.1.jar"; sha1 = "ef1b5f8ae9c99332f99ba8794988a1d5b974d27b"; @@ -72,4 +72,11 @@ nodePackages // { ''; buildInputs = oldAttrs.buildInputs ++ [ pkgs.phantomjs2 ]; }); + + node2nix = nodePackages.node2nix.override (oldAttrs: { + buildInputs = oldAttrs.buildInputs ++ [ pkgs.makeWrapper ]; + postInstall = '' + wrapProgram "$out/bin/node2nix" --prefix PATH : ${stdenv.lib.makeBinPath [ pkgs.nix ]} + ''; + }); } diff --git a/pkgs/development/perl-modules/MNI/default.nix b/pkgs/development/perl-modules/MNI/default.nix new file mode 100644 index 000000000000..176cd06a9cc3 --- /dev/null +++ b/pkgs/development/perl-modules/MNI/default.nix @@ -0,0 +1,21 @@ +{ fetchFromGitHub, buildPerlPackage, stdenv, perl }: + +buildPerlPackage rec { + name = "MNI-Perllib-2012-04-13"; + + src = fetchFromGitHub { + owner = "BIC-MNI"; + repo = "mni-perllib"; + rev = "b908472b4390180ea5d19a121ac5edad6ed88d83"; + sha256 = "0vk99pwgbard62k63386r7dpnm3h435jdqywr4xqfq7p04dz6kyb"; + }; + + patches = [ ./no-stdin.patch ]; + + doCheck = false; # TODO: almost all tests fail ... is this a real problem? + + meta = with stdenv.lib; { + license = with licenses; [ artistic1 gpl1Plus ]; + maintainers = with maintainers; [ bcdarwin ]; + }; +} diff --git a/pkgs/development/perl-modules/MNI/no-stdin.patch b/pkgs/development/perl-modules/MNI/no-stdin.patch new file mode 100644 index 000000000000..1e9e791257e7 --- /dev/null +++ b/pkgs/development/perl-modules/MNI/no-stdin.patch @@ -0,0 +1,13 @@ +diff --git a/Makefile.PL b/Makefile.PL +index 9f2039a..12d699c 100644 +--- a/Makefile.PL ++++ b/Makefile.PL +@@ -213,7 +213,7 @@ TEXT + } # &MY::postamble + + +-query_subs; ++#query_subs; + + my $f; + WriteMakefile diff --git a/pkgs/development/perl-modules/Socket6-sv_undef.patch b/pkgs/development/perl-modules/Socket6-sv_undef.patch new file mode 100644 index 000000000000..3ed4b61b6d3e --- /dev/null +++ b/pkgs/development/perl-modules/Socket6-sv_undef.patch @@ -0,0 +1,18 @@ +diff --git a/Socket6.xs b/Socket6.xs +index 05c791c..058e9d9 100644 +--- a/Socket6.xs ++++ b/Socket6.xs +@@ -105,10 +105,6 @@ const struct in6_addr in6addr_loopback = IN6ADDR_LOOPBACK_INIT; + #define HAVE_INET_PTON 1 + #endif + +-#ifndef HAVE_PL_SV_UNDEF +-#define PL_sv_undef sv_undef +-#endif +- + static int + not_here(char *s) + { +-- +2.16.3 + diff --git a/pkgs/development/python-modules/apsw/default.nix b/pkgs/development/python-modules/apsw/default.nix index c16fb3c4c46b..fb22128b9288 100644 --- a/pkgs/development/python-modules/apsw/default.nix +++ b/pkgs/development/python-modules/apsw/default.nix @@ -1,24 +1,24 @@ -{ stdenv, buildPythonPackage, fetchPypi +{ stdenv, buildPythonPackage, fetchFromGitHub , sqlite, isPyPy }: buildPythonPackage rec { pname = "apsw"; - version = "3.9.2-r1"; + version = "3.22.0-r1"; disabled = isPyPy; - src = fetchPypi { - inherit pname version; - sha256 = "dab96fd164dde9e59f7f27228291498217fa0e74048e2c08c7059d7e39589270"; + src = fetchFromGitHub { + owner = "rogerbinns"; + repo = "apsw"; + rev = version; + sha256 = "02ldvshcgr4c7c8anp4flfnw8g8ys5bflkb8b51rb618qxhhwyak"; }; buildInputs = [ sqlite ]; - # python: double free or corruption (fasttop): 0x0000000002fd4660 *** -# doCheck = false; - meta = with stdenv.lib; { description = "A Python wrapper for the SQLite embedded relational database engine"; - homepage = http://code.google.com/p/apsw/; + homepage = https://github.com/rogerbinns/apsw; + license = licenses.zlib; }; } diff --git a/pkgs/development/python-modules/canonicaljson/default.nix b/pkgs/development/python-modules/canonicaljson/default.nix new file mode 100644 index 000000000000..b7fd01472aab --- /dev/null +++ b/pkgs/development/python-modules/canonicaljson/default.nix @@ -0,0 +1,23 @@ +{ stdenv, buildPythonPackage, fetchPypi +, frozendict, simplejson, six +}: + +buildPythonPackage rec { + pname = "canonicaljson"; + version = "1.1.3"; + + src = fetchPypi { + inherit pname version; + sha256 = "1q50zk9a0r7kd56rdf9cgyxxj7vy54j96sgh8vc8jhmsvdv8dzh6"; + }; + + propagatedBuildInputs = [ + frozendict simplejson six + ]; + + meta = with stdenv.lib; { + homepage = https://github.com/matrix-org/python-canonicaljson; + description = "Encodes objects and arrays as RFC 7159 JSON."; + license = licenses.asl20; + }; +} diff --git a/pkgs/development/python-modules/cheroot/default.nix b/pkgs/development/python-modules/cheroot/default.nix index d1ecfcc5c89c..7aa01623b085 100644 --- a/pkgs/development/python-modules/cheroot/default.nix +++ b/pkgs/development/python-modules/cheroot/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchPypi, buildPythonPackage , more-itertools, six -, coverage, codecov, pytest, pytestcov, pytest-sugar, portend +, pytest, pytestcov, portend , backports_unittest-mock, setuptools_scm }: buildPythonPackage rec { @@ -16,7 +16,7 @@ buildPythonPackage rec { buildInputs = [ setuptools_scm ]; - checkInputs = [ coverage codecov pytest pytestcov pytest-sugar portend backports_unittest-mock ]; + checkInputs = [ pytest pytestcov portend backports_unittest-mock ]; checkPhase = '' py.test cheroot diff --git a/pkgs/development/python-modules/cherrypy/default.nix b/pkgs/development/python-modules/cherrypy/default.nix index 18c0ab826b3a..bb97a3a7e678 100644 --- a/pkgs/development/python-modules/cherrypy/default.nix +++ b/pkgs/development/python-modules/cherrypy/default.nix @@ -1,11 +1,10 @@ { lib, buildPythonPackage, fetchPypi , cheroot, portend, routes, six , setuptools_scm -, backports_unittest-mock, codecov, coverage, objgraph, pathpy, pytest, pytest-sugar, pytestcov +, backports_unittest-mock, objgraph, pathpy, pytest, pytestcov }: buildPythonPackage rec { - name = "${pname}-${version}"; pname = "CherryPy"; version = "14.0.1"; @@ -18,7 +17,7 @@ buildPythonPackage rec { buildInputs = [ setuptools_scm ]; - checkInputs = [ backports_unittest-mock codecov coverage objgraph pathpy pytest pytest-sugar pytestcov ]; + checkInputs = [ backports_unittest-mock objgraph pathpy pytest pytestcov ]; checkPhase = '' LANG=en_US.UTF-8 pytest diff --git a/pkgs/development/python-modules/cvxopt/default.nix b/pkgs/development/python-modules/cvxopt/default.nix new file mode 100644 index 000000000000..be6f688f5032 --- /dev/null +++ b/pkgs/development/python-modules/cvxopt/default.nix @@ -0,0 +1,69 @@ +{ lib +, buildPythonPackage +, fetchPypi +, isPyPy +, python +, openblasCompat # build segfaults with regular openblas +, suitesparse +, glpk ? null +, gsl ? null +, fftw ? null +, withGlpk ? true +, withGsl ? true +, withFftw ? true +}: + +buildPythonPackage rec { + pname = "cvxopt"; + version = "1.1.9"; + + disabled = isPyPy; # hangs at [translation:info] + + src = fetchPypi { + inherit pname version; + sha256 = "0gcqq8ymjxv8qa5ss2pdhsj5bahvdxa6h2rlpp51520mjxrpw5cg"; + }; + + # similar to Gsl, glpk, fftw there is also a dsdp interface + # but dsdp is not yet packaged in nixpkgs + preConfigure = '' + export CVXOPT_BLAS_LIB_DIR=${openblasCompat}/lib + export CVXOPT_BLAS_LIB=openblas + export CVXOPT_LAPACK_LIB=openblas + export CVXOPT_SUITESPARSE_LIB_DIR=${suitesparse}/lib + export CVXOPT_SUITESPARSE_INC_DIR=${suitesparse}/include + '' + lib.optionalString withGsl '' + export CVXOPT_BUILD_GSL=1 + export CVXOPT_GSL_LIB_DIR=${gsl}/lib + export CVXOPT_GSL_INC_DIR=${gsl}/include + '' + lib.optionalString withGlpk '' + export CVXOPT_BUILD_GLPK=1 + export CVXOPT_GLPK_LIB_DIR=${glpk}/lib + export CVXOPT_GLPK_INC_DIR=${glpk}/include + '' + lib.optionalString withFftw '' + export CVXOPT_BUILD_FFTW=1 + export CVXOPT_FFTW_LIB_DIR=${fftw}/lib + export CVXOPT_FFTW_INC_DIR=${fftw.dev}/include + ''; + + checkPhase = '' + ${python.interpreter} -m unittest discover -s tests + ''; + + meta = { + homepage = http://cvxopt.org/; + description = "Python Software for Convex Optimization"; + longDescription = '' + CVXOPT is a free software package for convex optimization based on the + Python programming language. It can be used with the interactive + Python interpreter, on the command line by executing Python scripts, + or integrated in other software via Python extension modules. Its main + purpose is to make the development of software for convex optimization + applications straightforward by building on Python's extensive + standard library and on the strengths of Python as a high-level + programming language. + ''; + maintainers = with lib.maintainers; [ edwtjo ]; + license = lib.licenses.gpl3Plus; + }; +} diff --git a/pkgs/development/python-modules/cypari2/default.nix b/pkgs/development/python-modules/cypari2/default.nix new file mode 100644 index 000000000000..fc3c311a5061 --- /dev/null +++ b/pkgs/development/python-modules/cypari2/default.nix @@ -0,0 +1,55 @@ +{ stdenv +, bootstrapped-pip +, buildPythonPackage +, python +, fetchPypi +, pari +, gmp +, cython +, cysignals +, six +}: + +buildPythonPackage rec { + pname = "cypari2"; + version = "1.1.4"; # remove six dependency on upgrade to >1.1.4 + + src = fetchPypi { + inherit pname version; + sha256 = "0n0mp8qmvvzmfaawg39d3mkyzf65q2zkz7bnqyk4sfjbz4xwc6mb"; + }; + + # This differs slightly from the default python installPhase in that it pip-installs + # "." instead of "*.whl". + # That is because while the default install phase succeeds to build the package, + # it fails to generate the file "auto_paridecl.pxd". + installPhase = '' + mkdir -p "$out/lib/${python.libPrefix}/site-packages" + export PYTHONPATH="$out/lib/${python.libPrefix}/site-packages:$PYTHONPATH" + + # install "." instead of "*.whl" + ${bootstrapped-pip}/bin/pip install --no-index --prefix=$out --no-cache --build=tmpdir . + ''; + + buildInputs = [ + pari + gmp + ]; + + propagatedBuildInputs = [ + cysignals + cython + six # after 1.1.4: will not be needed + ]; + + checkPhase = '' + make check + ''; + + meta = with stdenv.lib; { + description = "Cython bindings for PARI"; + license = licenses.gpl2; + maintainers = with maintainers; [ timokau ]; + homepage = https://github.com/defeo/cypari2; + }; +} diff --git a/pkgs/development/python-modules/dataclasses/default.nix b/pkgs/development/python-modules/dataclasses/default.nix new file mode 100644 index 000000000000..083ea6d6347b --- /dev/null +++ b/pkgs/development/python-modules/dataclasses/default.nix @@ -0,0 +1,21 @@ +{ stdenv, buildPythonPackage, fetchPypi, isPy36 }: + +buildPythonPackage rec { + pname = "dataclasses"; + version = "0.5"; + + # backport only works on Python 3.6, and is in the standard library in Python 3.7 + disabled = !isPy36; + + src = fetchPypi { + inherit pname version; + sha256 = "07lgn1k56sqpw7yfzv5a6mwshsgaipjawflgyr6lrkryjl64481z"; + }; + + meta = with stdenv.lib; { + description = "An implementation of PEP 557: Data Classes"; + homepage = "https://github.com/ericvsmith/dataclasses"; + license = licenses.asl20; + maintainers = with maintainers; [ catern ]; + }; +} diff --git a/pkgs/development/python-modules/digitalocean/default.nix b/pkgs/development/python-modules/digitalocean/default.nix index 1d36f7b5486e..e81caa66e5f3 100644 --- a/pkgs/development/python-modules/digitalocean/default.nix +++ b/pkgs/development/python-modules/digitalocean/default.nix @@ -1,4 +1,4 @@ -{ stdenv, buildPythonPackage, fetchPypi, requests }: +{ stdenv, buildPythonPackage, fetchPypi, requests, jsonpickle }: buildPythonPackage rec { pname = "python-digitalocean"; @@ -6,10 +6,10 @@ buildPythonPackage rec { src = fetchPypi { inherit pname version; - sha256 = "06391cf0b253c8b4a5a10b3a4b7b7808b890a1d1e3b43d5ce3b5293a9c77af6b"; + sha256 = "0h4drpdsmk0b3rlvg6q6cz11k23w0swj1iddk7xdcw4m7r7c52kw"; }; - propagatedBuildInputs = [ requests ]; + propagatedBuildInputs = [ requests jsonpickle ]; # Package doesn't distribute tests. doCheck = false; diff --git a/pkgs/development/python-modules/django/1_11.nix b/pkgs/development/python-modules/django/1_11.nix index ca0322cf607c..8dead5644858 100644 --- a/pkgs/development/python-modules/django/1_11.nix +++ b/pkgs/development/python-modules/django/1_11.nix @@ -6,14 +6,13 @@ buildPythonPackage rec { pname = "Django"; - name = "${pname}-${version}"; - version = "1.11.9"; + version = "1.11.12"; disabled = pythonOlder "2.7"; src = fetchurl { - url = "http://www.djangoproject.com/m/releases/1.11/${name}.tar.gz"; - sha256 = "0d0hh9sh2rwazi7z2lnqvz1424bq6ps6c5h6ss04klp14agi4g9m"; + url = "http://www.djangoproject.com/m/releases/1.11/${pname}-${version}.tar.gz"; + sha256 = "1szjha338grhf9dq0wpbrqwvak597shsx474pm5j67kn09xqqfad"; }; patches = stdenv.lib.optionals withGdal [ diff --git a/pkgs/development/python-modules/entrypoints/default.nix b/pkgs/development/python-modules/entrypoints/default.nix index c4f5410bc518..9ee0810571ad 100644 --- a/pkgs/development/python-modules/entrypoints/default.nix +++ b/pkgs/development/python-modules/entrypoints/default.nix @@ -15,9 +15,9 @@ buildPythonPackage rec { sha256 = "d2d587dde06f99545fb13a383d2cd336a8ff1f359c5839ce3a64c917d10c029f"; }; - checkInputs = [ pytest]; + checkInputs = [ pytest ]; - propagatedBuildInputs = [] ++ lib.optional (!isPy3k) [ configparser ]; + propagatedBuildInputs = lib.optional (!isPy3k) configparser; checkPhase = '' py.test tests @@ -28,4 +28,4 @@ buildPythonPackage rec { homepage = https://github.com/takluyver/entrypoints; license = lib.licenses.mit; }; -} \ No newline at end of file +} diff --git a/pkgs/development/python-modules/envs/default.nix b/pkgs/development/python-modules/envs/default.nix new file mode 100644 index 000000000000..7b6159d0e616 --- /dev/null +++ b/pkgs/development/python-modules/envs/default.nix @@ -0,0 +1,24 @@ +{ lib, buildPythonPackage, fetchFromGitHub +, click, jinja2, terminaltables }: + +buildPythonPackage rec { + pname = "envs"; + version = "1.2.4"; + + # move to fetchPyPi when https://github.com/capless/envs/issues/8 is fixed + src = fetchFromGitHub { + owner = "capless"; + repo = "envs"; + rev = "e1f6cbad7f20316fc44324d2c50826d57c2817a8"; + sha256 = "0p88a79amj0jxll3ssq1dzg78y7zwgc8yqyr7cf53nv2i7kmpakv"; + }; + + checkInputs = [ click jinja2 terminaltables ]; + + meta = with lib; { + description = "Easy access to environment variables from Python"; + homepage = https://github.com/capless/envs; + license = licenses.asl20; + maintainers = with maintainers; [ peterhoeg ]; + }; +} diff --git a/pkgs/development/python-modules/faulthandler/default.nix b/pkgs/development/python-modules/faulthandler/default.nix index 1fc1aea94d57..a05ac1ba679e 100644 --- a/pkgs/development/python-modules/faulthandler/default.nix +++ b/pkgs/development/python-modules/faulthandler/default.nix @@ -2,24 +2,13 @@ buildPythonPackage rec { pname = "faulthandler"; - version = "3.0"; + version = "3.1"; src = fetchPypi { inherit pname version; - sha256 = "acc10e10909f0f956ba1b42b6c450ea0bdaaa27b3942899f65931396cfcdd36a"; + sha256 = "83301ffab03c86b291677b64b5cec7026f412cbda5ebd27e4cb3338452c40021"; }; - patches = [ - (fetchpatch { - url = https://github.com/vstinner/faulthandler/commit/67b661e.patch; - sha256 = "1nn8c9nq5qypja949hzz0n4yprsyr63wihf5g3gwrinm2nkjnnv7"; - }) - (fetchpatch { - url = https://github.com/vstinner/faulthandler/commit/07cbb7b.patch; - sha256 = "0fh6rjyjw7z1hsiy3sgdc8j9mncg1vlv3y0h4bplqyw18vq3srb3"; - }) - ]; - meta = { description = "Dump the Python traceback"; license = stdenv.lib.licenses.bsd2; diff --git a/pkgs/development/python-modules/flask-autoindex/default.nix b/pkgs/development/python-modules/flask-autoindex/default.nix new file mode 100644 index 000000000000..397d1e03ee82 --- /dev/null +++ b/pkgs/development/python-modules/flask-autoindex/default.nix @@ -0,0 +1,44 @@ +{ stdenv +, buildPythonPackage +, fetchpatch +, fetchPypi +, flask +, flask-silk +, future +}: + +buildPythonPackage rec { + pname = "Flask-AutoIndex"; + version = "0.6"; + + src = fetchPypi { + inherit pname version; + sha256 = "19b10mb1nrqfjyafki6wnrbn8mqi30bbyyiyvp5xssc74pciyfqs"; + }; + + propagatedBuildInputs = [ + flask + flask-silk + future + ]; + + patches = [ + # fix generated binary, see https://github.com/sublee/flask-autoindex/pull/32 + (fetchpatch { + name = "fix_binary.patch"; + url = "https://github.com/sublee/flask-autoindex/pull/32.patch"; + sha256 = "1v2r0wvi7prhipjq89774svv6aqj0a13mdfj07pdlkpzfbf029dn"; + }) + ]; + + meta = with stdenv.lib; { + description = "The mod_autoindex for Flask"; + longDescription = '' + Flask-AutoIndex generates an index page for your Flask application automatically. + The result is just like mod_autoindex, but the look is more awesome! + ''; + license = licenses.bsd2; + maintainers = with maintainers; [ timokau ]; + homepage = http://pythonhosted.org/Flask-AutoIndex/; + }; +} diff --git a/pkgs/development/python-modules/flask-babel/default.nix b/pkgs/development/python-modules/flask-babel/default.nix new file mode 100644 index 000000000000..1f4f914968f6 --- /dev/null +++ b/pkgs/development/python-modules/flask-babel/default.nix @@ -0,0 +1,44 @@ +{ stdenv +, buildPythonPackage +, python +, fetchPypi +, flask +, Babel +, jinja2 +, pytz +, speaklater +}: + +buildPythonPackage rec { + pname = "Flask-Babel"; + version = "0.11.2"; + + src = fetchPypi { + inherit pname version; + sha256 = "0ff9n165vhf1nhv6807ckhpp224jw7k7sd7jz5kfh3sbpl85gmy0"; + }; + + propagatedBuildInputs = [ + flask + Babel + jinja2 + pytz + speaklater + ]; + + checkPhase = '' + ${python.interpreter} -m unittest discover -s tests + ''; + + meta = with stdenv.lib; { + description = "Adds i18n/l10n support to Flask applications"; + longDescription = '' + Implements i18n and l10n support for Flask. + This is based on the Python babel module as well as pytz both of which are + installed automatically for you if you install this library. + ''; + license = licenses.bsd2; + maintainers = with maintainers; [ timokau ]; + homepage = https://github.com/python-babel/flask-babel; + }; +} diff --git a/pkgs/development/python-modules/flask-silk/default.nix b/pkgs/development/python-modules/flask-silk/default.nix new file mode 100644 index 000000000000..e494f22a4762 --- /dev/null +++ b/pkgs/development/python-modules/flask-silk/default.nix @@ -0,0 +1,26 @@ +{ stdenv +, buildPythonPackage +, fetchPypi +, flask +}: + +buildPythonPackage rec { + pname = "Flask-Silk"; + version = "0.2"; + + src = fetchPypi { + inherit pname version; + sha256 = "1gjzighx4f0w39sq9xvzr1kwb4y7yv9qrgzvli1p89gy16piz8l0"; + }; + + propagatedBuildInputs = [ + flask + ]; + + meta = with stdenv.lib; { + description = "Adds silk icons to your Flask application or module, or extension"; + license = licenses.bsd3; + maintainers = with maintainers; [ timokau ]; + homepage = https://github.com/sublee/flask-silk; + }; +} diff --git a/pkgs/development/python-modules/fpylll/default.nix b/pkgs/development/python-modules/fpylll/default.nix new file mode 100644 index 000000000000..6ce069b31910 --- /dev/null +++ b/pkgs/development/python-modules/fpylll/default.nix @@ -0,0 +1,55 @@ +{ lib +, fetchPypi +, buildPythonPackage +, pkgconfig +, gmp +, pari +, mpfr +, fplll +, cython +, cysignals +, numpy +, pytest +}: + +buildPythonPackage rec { + pname = "fpylll"; + version = "0.3.0dev"; + + src = fetchPypi { + inherit pname version; + sha256 = "0bjkh02fnxsrxwjzai8ij12zl2wq319z8y25sn9pvvzla5izgnp9"; + }; + + buildInputs = [ + gmp + pari + mpfr + fplll + ]; + + propagatedBuildInputs = [ + cython + cysignals + numpy + ]; + + nativeBuildInputs = [ + pkgconfig + ]; + + checkInputs = [ + pytest + ]; + + checkPhase = '' + py.test + ''; + + meta = { + description = "A Python interface for fplll"; + homepage = https://github.com/fplll/fpylll; + maintainers = with lib.maintainers; [ timokau ]; + license = lib.licenses.gpl2Plus; + }; +} diff --git a/pkgs/development/python-modules/frozendict/default.nix b/pkgs/development/python-modules/frozendict/default.nix new file mode 100644 index 000000000000..94d42206d63d --- /dev/null +++ b/pkgs/development/python-modules/frozendict/default.nix @@ -0,0 +1,20 @@ +{ stdenv, buildPythonPackage, fetchPypi }: + +buildPythonPackage rec { + pname = "frozendict"; + version = "1.2"; + + src = fetchPypi { + inherit pname version; + sha256 = "0ibf1wipidz57giy53dh7mh68f2hz38x8f4wdq88mvxj5pr7jhbp"; + }; + + # frozendict does not come with tests + doCheck = false; + + meta = with stdenv.lib; { + homepage = https://github.com/slezica/python-frozendict; + description = "An immutable dictionary"; + license = licenses.mit; + }; +} diff --git a/pkgs/development/python-modules/html5-parser/default.nix b/pkgs/development/python-modules/html5-parser/default.nix index faddfe2bfddb..ae036d33f9ed 100644 --- a/pkgs/development/python-modules/html5-parser/default.nix +++ b/pkgs/development/python-modules/html5-parser/default.nix @@ -2,12 +2,12 @@ buildPythonPackage rec { pname = "html5-parser"; - version = "0.4.4"; + version = "0.4.5"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "b9f3a1d4cdb8742e8e4ecafab04bff541bde4ff09af233293ed0b94028ec1ab5"; + sha256 = "01mx33sx4dhl4kj6wc48nj6jz7ry60rkhjv0s6k8h5xmjf5yy0x9"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/python-modules/keyring/default.nix b/pkgs/development/python-modules/keyring/default.nix index 2029eabba026..ce5bb315581d 100644 --- a/pkgs/development/python-modules/keyring/default.nix +++ b/pkgs/development/python-modules/keyring/default.nix @@ -17,7 +17,9 @@ buildPythonPackage rec { propagatedBuildInputs = [ entrypoints ] ++ stdenv.lib.optional stdenv.isLinux secretstorage; - doCheck = !stdenv.isDarwin; + # all tests with flake8 are broken right now + # https://github.com/tholo/pytest-flake8/issues/45 + doCheck = false; checkPhase = '' py.test diff --git a/pkgs/development/python-modules/libgpuarray/default.nix b/pkgs/development/python-modules/libgpuarray/default.nix index c0c2b205f58b..26fe33995ed8 100644 --- a/pkgs/development/python-modules/libgpuarray/default.nix +++ b/pkgs/development/python-modules/libgpuarray/default.nix @@ -33,7 +33,7 @@ buildPythonPackage rec { libraryPath = lib.makeLibraryPath ( [] ++ lib.optionals cudaSupport [ cudatoolkit.lib cudatoolkit.out ] - ++ lib.optionals openclSupport [ ocl-icd clblas ] + ++ lib.optionals openclSupport ([ clblas ] ++ lib.optional (!stdenv.isDarwin) ocl-icd) ); preBuild = '' @@ -47,7 +47,7 @@ buildPythonPackage rec { postFixup = '' rm $out/lib/libgpuarray-static.a - + '' + stdenv.lib.optionalString (!stdenv.isDarwin) '' function fixRunPath { p=$(patchelf --print-rpath $1) patchelf --set-rpath "$p:$libraryPath" $1 @@ -75,7 +75,7 @@ buildPythonPackage rec { description = "Library to manipulate tensors on GPU."; license = licenses.free; maintainers = with maintainers; [ artuuge ]; - platforms = platforms.linux; + platforms = platforms.unix; }; } diff --git a/pkgs/development/python-modules/milksnake/default.nix b/pkgs/development/python-modules/milksnake/default.nix new file mode 100644 index 000000000000..014bb223225d --- /dev/null +++ b/pkgs/development/python-modules/milksnake/default.nix @@ -0,0 +1,26 @@ +{ lib, buildPythonPackage, fetchPypi, cffi }: + +buildPythonPackage rec { + pname = "milksnake"; + version = "0.1.5"; + + src = fetchPypi { + inherit pname version; + extension = "zip"; + sha256 = "120nprd8lqis7x7zy72536gk2j68f7gxm8gffmx8k4ygifvl7kfz"; + }; + + propagatedBuildInputs = [ + cffi + ]; + + # tests rely on pip/venv + doCheck = false; + + meta = with lib; { + description = "A python library that extends setuptools for binary extensions"; + homepage = https://github.com/getsentry/milksnake; + license = licenses.asl20; + maintainers = with maintainers; [ matthiasbeyer ]; + }; +} diff --git a/pkgs/development/python-modules/misaka/default.nix b/pkgs/development/python-modules/misaka/default.nix new file mode 100644 index 000000000000..b40aead39090 --- /dev/null +++ b/pkgs/development/python-modules/misaka/default.nix @@ -0,0 +1,22 @@ +{ lib, fetchPypi, buildPythonPackage, cffi }: +buildPythonPackage rec { + pname = "misaka"; + version = "2.1.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "1yqrq3a5rracirmvk52n28nn6ckdaz897gnigv89a9gmyn87sqw7"; + }; + + propagatedBuildInputs = [ cffi ]; + + # The tests require write access to $out + doCheck = false; + + meta = with lib; { + description = "A CFFI binding for Hoedown, a markdown parsing library"; + homepage = "http://misaka.61924.nl/"; + license = licenses.mit; + maintainers = with maintainers; [ fgaz ]; + }; +} diff --git a/pkgs/development/python-modules/mysql-connector/default.nix b/pkgs/development/python-modules/mysql-connector/default.nix index 6a2b3de00165..78069d49246c 100644 --- a/pkgs/development/python-modules/mysql-connector/default.nix +++ b/pkgs/development/python-modules/mysql-connector/default.nix @@ -4,17 +4,20 @@ buildPythonPackage rec { pname = "mysql-connector"; - version = "8.0.6"; + version = "8.0.11"; src = fetchFromGitHub { owner = "mysql"; repo = "mysql-connector-python"; rev = version; - sha256 = "1ygr7va56da12yp3gr7kzss9zgbs28q2lmdkw16rpxj108id4rkp"; + sha256 = "0w5sxy0zdkdj5cj35wwfjy9y8yn5yzk9biwwsglvhkqlkrms8fw1"; }; propagatedBuildInputs = [ protobuf ]; + # Tests are failing (TODO: unknown reason) + # TypeError: __init__() missing 1 required positional argument: 'string' + # But the library should be working as expected. doCheck = false; meta = { diff --git a/pkgs/development/python-modules/portend/default.nix b/pkgs/development/python-modules/portend/default.nix index bd13c63c4043..3559053481e1 100644 --- a/pkgs/development/python-modules/portend/default.nix +++ b/pkgs/development/python-modules/portend/default.nix @@ -1,20 +1,25 @@ { stdenv, buildPythonPackage, fetchPypi -, pytest, pytest-sugar, pytest-warnings, setuptools_scm -, tempora }: +, pytest, setuptools_scm, tempora }: buildPythonPackage rec { - name = "${pname}-${version}"; pname = "portend"; version = "2.2"; - buildInputs = [ pytest pytest-sugar pytest-warnings setuptools_scm ]; - propagatedBuildInputs = [ tempora ]; - src = fetchPypi { inherit pname version; sha256 = "bc48d3d99e1eaf2e9406c729f8848bfdaf87876cd3560dc3ec6c16714f529586"; }; + nativeBuildInputs = [ setuptools_scm ]; + + propagatedBuildInputs = [ tempora ]; + + checkInputs = [ pytest ]; + + checkPhase = '' + py.test + ''; + meta = with stdenv.lib; { description = "Monitor TCP ports for bound or unbound states"; homepage = https://github.com/jaraco/portend; diff --git a/pkgs/development/python-modules/praw/default.nix b/pkgs/development/python-modules/praw/default.nix index c0be1009b069..8f43cbfb4a8c 100644 --- a/pkgs/development/python-modules/praw/default.nix +++ b/pkgs/development/python-modules/praw/default.nix @@ -5,15 +5,20 @@ buildPythonPackage rec { pname = "praw"; - version = "5.2.0"; + version = "5.4.0"; src = fetchFromGitHub { owner = "praw-dev"; repo = "praw"; rev = "v${version}"; - sha256 = "0nwfadczxa1fyq65zc3sfv8g2r4w3xrx3bdi5fv9xpn97wh2ifgw"; + sha256 = "13vbh2r952ai2m6sc79psfwaj5fc8cssdg2pqpizg2mwd0l1s6lb"; }; + postPatch = '' + # drop upper bound of prawcore requirement + sed -ri "s/'(prawcore >=.+), <.+'/'\1'/" setup.py + ''; + propagatedBuildInputs = [ requests decorator diff --git a/pkgs/development/python-modules/pyarrow/default.nix b/pkgs/development/python-modules/pyarrow/default.nix new file mode 100644 index 000000000000..1c2cb4a7643d --- /dev/null +++ b/pkgs/development/python-modules/pyarrow/default.nix @@ -0,0 +1,65 @@ +{ lib, buildPythonPackage, python, isPy3k, fetchurl, arrow-cpp, cmake, cython, futures, numpy, pandas, pytest, pytestrunner, parquet-cpp, pkgconfig, setuptools_scm, six }: + +let + _arrow-cpp = arrow-cpp.override { inherit python;}; + _parquet-cpp = parquet-cpp.override { arrow-cpp = _arrow-cpp; }; +in + +buildPythonPackage rec { + pname = "pyarrow"; + version = "0.9.0"; + + src = fetchurl { + url = "mirror://apache/arrow/arrow-${version}/apache-arrow-${version}.tar.gz"; + sha256 = "16l91fixb5dgx3v6xc73ipn1w1hjgbmijyvs81j7ywzpna2cdcdy"; + }; + + sourceRoot = "apache-arrow-${version}/python"; + + nativeBuildInputs = [ cmake cython pkgconfig setuptools_scm ]; + propagatedBuildInputs = [ numpy six ] ++ lib.optionals (!isPy3k) [ futures ]; + checkInputs = [ pandas pytest pytestrunner ]; + + PYARROW_BUILD_TYPE = "release"; + PYARROW_CMAKE_OPTIONS = "-DCMAKE_INSTALL_RPATH=${ARROW_HOME}/lib;${PARQUET_HOME}/lib"; + + preBuild = '' + substituteInPlace CMakeLists.txt --replace "\''${ARROW_ABI_VERSION}" '"0.0.0"' + substituteInPlace CMakeLists.txt --replace "\''${ARROW_SO_VERSION}" '"0"' + + # fix the hardcoded value + substituteInPlace cmake_modules/FindParquet.cmake --replace 'set(PARQUET_ABI_VERSION "1.0.0")' 'set(PARQUET_ABI_VERSION "${_parquet-cpp.version}")' + ''; + + preCheck = '' + rm pyarrow/tests/test_hdfs.py + + # fails: "ArrowNotImplementedError: Unsupported numpy type 22" + substituteInPlace pyarrow/tests/test_feather.py --replace "test_timedelta_with_nulls" "_disabled" + + # runs out of memory on @grahamcofborg linux box + substituteInPlace pyarrow/tests/test_feather.py --replace "test_large_dataframe" "_disabled" + + # probably broken on python2 + substituteInPlace pyarrow/tests/test_feather.py --replace "test_unicode_filename" "_disabled" + + # fails "error: [Errno 2] No such file or directory: 'test'" because + # nix_run_setup invocation somehow manages to import deserialize_buffer.py + # when it is not intended to be imported at all + rm pyarrow/tests/deserialize_buffer.py + substituteInPlace pyarrow/tests/test_feather.py --replace "test_deserialize_buffer_in_different_process" "_disabled" + ''; + + ARROW_HOME = _arrow-cpp; + PARQUET_HOME = _parquet-cpp; + + setupPyBuildFlags = ["--with-parquet" ]; + + meta = with lib; { + description = "A cross-language development platform for in-memory data"; + homepage = https://arrow.apache.org/; + license = lib.licenses.asl20; + platforms = platforms.unix; + maintainers = with lib.maintainers; [ veprbl ]; + }; +} diff --git a/pkgs/development/python-modules/pyatspi/default.nix b/pkgs/development/python-modules/pyatspi/default.nix index 6192f94445f3..5960551abc72 100644 --- a/pkgs/development/python-modules/pyatspi/default.nix +++ b/pkgs/development/python-modules/pyatspi/default.nix @@ -1,29 +1,35 @@ -{ stdenv, fetchurl, pkgconfig, at-spi2-core, pythonPackages }: +{ stdenv, fetchurl, pkgconfig, buildPythonPackage, isPy3k, at-spi2-core, pygobject3, gnome3 }: -stdenv.mkDerivation rec { +buildPythonPackage rec { pname = "pyatspi"; - version = "2.18.0"; - name = "${pname}-${version}"; + version = "2.26.0"; + format = "other"; src = fetchurl { - url = "mirror://gnome/sources/pyatspi/2.18/${name}.tar.xz"; - sha256 = "0imbyk2v6c11da7pkwz91313pkkldxs8zfg81zb2ql6h0nnh6vzq"; + url = "mirror://gnome/sources/${pname}/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz"; + sha256 = "0xdnix7gxzgf75xy9ris4dd6b05mqwicw190b98xqmypydyf95n6"; }; - broken = true; - buildInputs = [ at-spi2-core pkgconfig - pythonPackages.python - pythonPackages.pygobject3 + pygobject3 ]; + disabled = !isPy3k; + + passthru = { + updateScript = gnome3.updateScript { + packageName = pname; + attrPath = "python3.pkgs.${pname}"; + }; + }; + meta = with stdenv.lib; { - description = "Python 3 bindings for at-spi"; - homepage = http://www.linuxfoundation.org/en/AT-SPI_on_D-Bus; + description = "Python client bindings for D-Bus AT-SPI"; + homepage = https://wiki.linuxfoundation.org/accessibility/d-bus; license = licenses.gpl2; - maintainers = with maintainers; [ jgeerds ]; + maintainers = with maintainers; [ jgeerds jtojnar ]; platforms = with platforms; unix; }; } diff --git a/pkgs/development/python-modules/pyocr/default.nix b/pkgs/development/python-modules/pyocr/default.nix index e253e64a41ca..c30d80a00155 100644 --- a/pkgs/development/python-modules/pyocr/default.nix +++ b/pkgs/development/python-modules/pyocr/default.nix @@ -1,11 +1,12 @@ { lib, fetchFromGitHub, buildPythonPackage, pillow, six -, tesseract, cuneiform +, tesseract, cuneiform, isPy3k }: buildPythonPackage rec { pname = "pyocr"; version = "0.4.7"; name = pname + "-" + version; + disabled = !isPy3k; # Don't fetch from PYPI because it doesn't contain tests. src = fetchFromGitHub { diff --git a/pkgs/development/python-modules/pytest-sugar/default.nix b/pkgs/development/python-modules/pytest-sugar/default.nix index a266b4617492..16cd9aa966ad 100644 --- a/pkgs/development/python-modules/pytest-sugar/default.nix +++ b/pkgs/development/python-modules/pytest-sugar/default.nix @@ -19,5 +19,9 @@ buildPythonPackage rec { description = "A plugin that changes the default look and feel of py.test"; homepage = https://github.com/Frozenball/pytest-sugar; license = licenses.bsd3; + + # incompatible with pytest 3.5 + # https://github.com/Frozenball/pytest-sugar/issues/134 + broken = true; # 2018-04-20 }; } diff --git a/pkgs/development/python-modules/python-docx/default.nix b/pkgs/development/python-modules/python-docx/default.nix new file mode 100644 index 000000000000..11ade481df5e --- /dev/null +++ b/pkgs/development/python-modules/python-docx/default.nix @@ -0,0 +1,33 @@ +{ lib +, behave +, buildPythonPackage +, fetchPypi +, lxml +, pytest +, pyparsing +, mock +}: + +buildPythonPackage rec { + pname = "python-docx"; + version = "0.8.6"; + + src = fetchPypi { + inherit pname version; + sha256 = "117i84s6fcdsrfckbvznnqgqwhnf1x0523ps16cki8sg9byydv2m"; + }; + + checkInputs = [ behave mock pyparsing pytest ]; + propagatedBuildInputs = [ lxml ]; + + checkPhase = '' + py.test tests + ''; + + meta = { + description = "Create and update Microsoft Word .docx files"; + homepage = https://python-docx.readthedocs.io/en/latest/; + license = lib.licenses.mit; + maintainers = [ lib.maintainers.alexchapman ]; + }; +} diff --git a/pkgs/development/python-modules/raven/default.nix b/pkgs/development/python-modules/raven/default.nix index 33d199ad274a..2052d4421e5e 100644 --- a/pkgs/development/python-modules/raven/default.nix +++ b/pkgs/development/python-modules/raven/default.nix @@ -4,13 +4,13 @@ buildPythonPackage rec { pname = "raven"; - version = "6.6.0"; + version = "6.7.0"; src = fetchFromGitHub { owner = "getsentry"; repo = "raven-python"; rev = version; - sha256 = "184wpr0zdcm260pxqll9kpmp2ywisn75k8pdm8gc6xmk740in1hj"; + sha256 = "0vb6zczfgrrh0qw5wlbvk703r11y091k6r53fbbhpbwh4hva30nx"; }; # way too many dependencies to run tests diff --git a/pkgs/development/python-modules/rlp/default.nix b/pkgs/development/python-modules/rlp/default.nix new file mode 100644 index 000000000000..6443a4e2bbfe --- /dev/null +++ b/pkgs/development/python-modules/rlp/default.nix @@ -0,0 +1,21 @@ +{ lib, fetchPypi, buildPythonPackage, pytest }: + +buildPythonPackage rec { + name = "${pname}-${version}"; + pname = "rlp"; + version = "0.6.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "0d3gx4mp8q4z369s5yk1n9c55sgfw9fidbwqxq67d6s7l45rm1w7"; + }; + + buildInputs = [ pytest ]; + + meta = { + description = "A package for encoding and decoding data in and from Recursive Length Prefix notation"; + homepage = "https://github.com/ethereum/pyrlp"; + license = lib.licenses.mit; + maintainers = with lib.maintainers; [ gebner ]; + }; +} diff --git a/pkgs/development/python-modules/rpy2/default.nix b/pkgs/development/python-modules/rpy2/default.nix new file mode 100644 index 000000000000..8db7ae3b3372 --- /dev/null +++ b/pkgs/development/python-modules/rpy2/default.nix @@ -0,0 +1,54 @@ +{ lib +, buildPythonPackage +, fetchPypi +, isPyPy +, readline +, R +, pcre +, lzma +, bzip2 +, zlib +, icu +, singledispatch +, six +, jinja2 +, pytest +}: + +buildPythonPackage rec { + version = "2.8.2"; + pname = "rpy2"; + disabled = isPyPy; + src = fetchPypi { + inherit version pname; + sha256 = "0k5jp6n1lfab7a6r5568aq31hg4fgf2cwy0hzvf3chp6yhyk26ic"; + }; + buildInputs = [ + readline + R + pcre + lzma + bzip2 + zlib + icu + ]; + propagatedBuildInputs = [ + singledispatch + six + jinja2 + ]; + checkInputs = [ pytest ]; + # Tests fail with `assert not _relpath.startswith('..'), "Path must be within the project"` + # in the unittest `loader.py`. I don't know what causes this. + doCheck = false; + # without this tests fail when looking for libreadline.so + LD_LIBRARY_PATH = lib.makeLibraryPath buildInputs; + + meta = { + homepage = http://rpy.sourceforge.net/rpy2; + description = "Python interface to R"; + license = lib.licenses.gpl2Plus; + platforms = lib.platforms.linux; + maintainers = with lib.maintainers; [ joelmo ]; + }; + } diff --git a/pkgs/development/python-modules/scapy/default.nix b/pkgs/development/python-modules/scapy/default.nix index d7b2a827f7d1..c24592ef9650 100644 --- a/pkgs/development/python-modules/scapy/default.nix +++ b/pkgs/development/python-modules/scapy/default.nix @@ -6,7 +6,6 @@ buildPythonPackage rec { pname = "scapy"; version = "2.4.0"; - name = pname + "-" + version; disabled = isPyPy; diff --git a/pkgs/development/python-modules/serversyncstorage/default.nix b/pkgs/development/python-modules/serversyncstorage/default.nix index 40a580877af5..1d9274610dad 100644 --- a/pkgs/development/python-modules/serversyncstorage/default.nix +++ b/pkgs/development/python-modules/serversyncstorage/default.nix @@ -35,4 +35,8 @@ buildPythonPackage rec { pyramid sqlalchemy simplejson mozsvc cornice pyramid_hawkauth pymysql pymysqlsa umemcache WSGIProxy requests pybrowserid ]; + + meta = { + broken = true; # 2018-11-04 + }; } diff --git a/pkgs/development/python-modules/trezor/default.nix b/pkgs/development/python-modules/trezor/default.nix index cc31939ff032..3a6b5f62e4f5 100644 --- a/pkgs/development/python-modules/trezor/default.nix +++ b/pkgs/development/python-modules/trezor/default.nix @@ -1,5 +1,5 @@ { lib, fetchPypi, buildPythonPackage, - protobuf, hidapi, ecdsa, mnemonic, requests, pyblake2, click, libusb1 + protobuf, hidapi, ecdsa, mnemonic, requests, pyblake2, click, libusb1, rlp }: buildPythonPackage rec { @@ -12,7 +12,7 @@ buildPythonPackage rec { sha256 = "a481191011bade98f1e9f1201e7c72a83945050657bbc90dc4ac32dc8b8b46a4"; }; - propagatedBuildInputs = [ protobuf hidapi ecdsa mnemonic requests pyblake2 click libusb1 ]; + propagatedBuildInputs = [ protobuf hidapi ecdsa mnemonic requests pyblake2 click libusb1 rlp ]; # There are no actual tests: "ImportError: No module named tests" doCheck = false; diff --git a/pkgs/development/python-modules/warrant/default.nix b/pkgs/development/python-modules/warrant/default.nix new file mode 100644 index 000000000000..ac83430fbae2 --- /dev/null +++ b/pkgs/development/python-modules/warrant/default.nix @@ -0,0 +1,36 @@ +{ lib, buildPythonPackage, fetchFromGitHub, fetchPypi +, mock +, boto3, envs, python-jose, requests }: + +buildPythonPackage rec { + pname = "warrant"; + version = "0.6.1"; + + # move to fetchPyPi when https://github.com/capless/warrant/issues/97 is fixed + src = fetchFromGitHub { + owner = "capless"; + repo = "warrant"; + rev = "ff2e4793d8479e770f2461ef7cbc0c15ee784395"; + sha256 = "0gw3crg64p1zx3k5js0wh0x5bldgs7viy4g8hld9xbka8q0374hi"; + }; + + # this needs to go when 0.6.2 or later is released + postPatch = '' + substituteInPlace requirements.txt \ + --replace "python-jose-cryptodome>=1.3.2" "python-jose>=2.0.0" + ''; + + checkInputs = [ mock ]; + + propagatedBuildInputs = [ boto3 envs python-jose requests ]; + + # all the checks are failing + doCheck = false; + + meta = with lib; { + description = "Python library for using AWS Cognito with support for SRP"; + homepage = https://github.com/capless/warrant; + license = lib.licenses.asl20; + maintainers = with lib.maintainers; [ peterhoeg ]; + }; +} diff --git a/pkgs/development/python-modules/weboob/default.nix b/pkgs/development/python-modules/weboob/default.nix index b71e4d3a4fff..a4b1b9c467a4 100644 --- a/pkgs/development/python-modules/weboob/default.nix +++ b/pkgs/development/python-modules/weboob/default.nix @@ -33,6 +33,7 @@ buildPythonPackage rec { homepage = http://weboob.org; description = "Collection of applications and APIs to interact with websites without requiring the user to open a browser"; license = stdenv.lib.licenses.agpl3; + broken = true; # 2018-04-11 }; } diff --git a/pkgs/development/python-modules/xdot/default.nix b/pkgs/development/python-modules/xdot/default.nix index 526376a41632..f9a735c97ab3 100644 --- a/pkgs/development/python-modules/xdot/default.nix +++ b/pkgs/development/python-modules/xdot/default.nix @@ -1,4 +1,4 @@ -{ lib, buildPythonPackage, fetchPypi +{ lib, buildPythonPackage, fetchPypi, isPy3k , wrapGAppsHook, gobjectIntrospection, pygobject3, graphviz, gnome3 }: buildPythonPackage rec { @@ -10,6 +10,8 @@ buildPythonPackage rec { sha256 = "01v9vmgdxz1q2m2vq2b4aqx4ycw7grc0l4is673ygvyg9rk02dx3"; }; + disabled = !isPy3k; + nativeBuildInputs = [ wrapGAppsHook ]; propagatedBuildInputs = [ gobjectIntrospection pygobject3 graphviz gnome3.gtk ]; diff --git a/pkgs/development/python-modules/yolk/default.nix b/pkgs/development/python-modules/yolk/default.nix index 958fcd72f84a..6e05b6ced043 100644 --- a/pkgs/development/python-modules/yolk/default.nix +++ b/pkgs/development/python-modules/yolk/default.nix @@ -17,7 +17,7 @@ buildPythonApplication rec { meta = { description = "Command-line tool for querying PyPI and Python packages installed on your system"; homepage = https://github.com/cakebread/yolk; - maintainer = with maintainers; []; + maintainers = with maintainers; []; license = licenses.bsd3; }; } diff --git a/pkgs/development/python-modules/zipfile36/default.nix b/pkgs/development/python-modules/zipfile36/default.nix index 0915eb002b79..2929afed1cd3 100644 --- a/pkgs/development/python-modules/zipfile36/default.nix +++ b/pkgs/development/python-modules/zipfile36/default.nix @@ -28,6 +28,6 @@ buildPythonPackage rec { description = "Read and write ZIP files - backport of the zipfile module from Python 3.6"; homepage = https://gitlab.com/takluyver/zipfile36; license = lib.licenses.psfl; - maintainer = lib.maintainers.fridh; + maintainers = lib.maintainers.fridh; }; -} \ No newline at end of file +} diff --git a/pkgs/development/r-modules/bioc-experiment-packages.nix b/pkgs/development/r-modules/bioc-experiment-packages.nix index 220ac60486b8..f323532ad7d9 100644 --- a/pkgs/development/r-modules/bioc-experiment-packages.nix +++ b/pkgs/development/r-modules/bioc-experiment-packages.nix @@ -70,7 +70,7 @@ in with self; { HelloRangesData = derive2 { name="HelloRangesData"; version="1.4.0"; sha256="1c7gfhwr9g6hv0p3s4yd8v9rhjp3jmrnzsqsqq4ysc2i24nf7drr"; depends=[]; }; HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="0.112.0"; sha256="1qxg7650lbfbjl9p75clrybsdbzd0yzpi8pi2biv83jgqkkjrd0b"; depends=[]; }; HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.14.0"; sha256="0708xgm495a330h70yi2qd494h6gf0n46j016mw9bc4gzbb7aq9p"; depends=[]; }; - Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.14.0"; sha256="0lah9l8gd5gs1wj68l9hqakcwha0rl88dg2p0zk92nff64jxn3pj"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; + Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.14.1"; sha256="0b47hi6di0gy4f8bzhsjm5ag5jhqqsgh5h19h4lwr5jcg2710ang"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; HumanAffyData = derive2 { name="HumanAffyData"; version="1.4.0"; sha256="0xgb3rrvgrx6sdwbb8gb1q8mgf0s2giih8l8d3hzvnxazh80qs8b"; depends=[Biobase ExperimentHub]; }; IHWpaper = derive2 { name="IHWpaper"; version="1.6.0"; sha256="08gkdi1lra9mn1cbsqddqn3pwj3pfy2yfgzay5igr7n1akfmgh7k"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; ITALICSData = derive2 { name="ITALICSData"; version="2.16.0"; sha256="1rrfxc3hzlq2i0z5j432w3s33ln56i91a06q49piisz06vviz6yv"; depends=[]; }; @@ -260,7 +260,7 @@ in with self; { lungExpression = derive2 { name="lungExpression"; version="0.16.0"; sha256="09v9r6rmfcqprqd1rx53sa4dhjjmg6d9649vlhfhzkyc73yknwmb"; depends=[Biobase]; }; lydata = derive2 { name="lydata"; version="1.4.0"; sha256="0dflfp14gdjgy7qf3my0vas5zbg77l16li7xgv1924cry11w2dxx"; depends=[]; }; mAPKLData = derive2 { name="mAPKLData"; version="1.10.0"; sha256="1bfx4imb5yg17n0g1ag436zlks4jcp8ga0xj9wyh9bhx4miwyay4"; depends=[]; }; - mammaPrintData = derive2 { name="mammaPrintData"; version="1.14.0"; sha256="0ks72wnagdvnbilqcsvl5lbhgh64fhbfys0da03336f1z16f5lv9"; depends=[]; }; + mammaPrintData = derive2 { name="mammaPrintData"; version="1.14.2"; sha256="04ymimgj8ng5qgvq0cglmhcxv7a3jqx9a2zyg8lwiwzpyip18inx"; depends=[]; }; maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.22.0"; sha256="0hn20i11vl9x23mx283aki097r1a8rspagac821kmlwghyab1mxq"; depends=[]; }; metaMSdata = derive2 { name="metaMSdata"; version="1.14.0"; sha256="1iygqxymvb98cm325bmdqb34n9b4k1vdzdyzcq8a0gh1dvs2m0iw"; depends=[]; }; methyvimData = derive2 { name="methyvimData"; version="1.0.0"; sha256="1b2mvcawafkr15py8h9j10w5givifi99h9clbdmkgfyixbbh0m94"; depends=[minfi]; }; @@ -287,7 +287,7 @@ in with self; { pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.14.0"; sha256="137lj4j0hlz3mkwyf334xr3bpm9j2jg1cd2sw9203kx6hvk92i2z"; depends=[]; }; pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.14.0"; sha256="0kb62bm1a8m88g59v6553qg69rmv0gh0wy4yfkqvn2sgz51zk4r4"; depends=[]; }; pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.14.0"; sha256="0b3cak7nzd6qxr7gnly4246gjdhxyp8h0w5dr1xsgwd9zy1k0psw"; depends=[]; }; - pcxnData = derive2 { name="pcxnData"; version="1.0.0"; sha256="0bkzqac0b2x1f398bflv077dp6nb3ysdf75jcwxpj4nwyhcb7n4f"; depends=[]; }; + pcxnData = derive2 { name="pcxnData"; version="2.0.0"; sha256="10qhw7v1nzf4y9xhd34jiimcyi6lgjy6y9zc6kzk80hm6qiry8j2"; depends=[]; }; pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.16.0"; sha256="1ilwm4nx232dll01xqqvagq3qi6qa060v84y20ihxhfwdm46z0ci"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; pepDat = derive2 { name="pepDat"; version="0.112.0"; sha256="15v4yk9cpnz2k16ka4iyc61ji5ck9mlkabgzxalwfnz77ri23mk0"; depends=[GenomicRanges]; }; plasFIA = derive2 { name="plasFIA"; version="1.6.0"; sha256="0p3pbjm5ww24ax7h72m38l0rcm01w5a4h8j5rsgynczvfv9jlwjq"; depends=[proFIA]; }; diff --git a/pkgs/development/r-modules/bioc-packages.nix b/pkgs/development/r-modules/bioc-packages.nix index 2d98b23a8671..efb91b43bb04 100644 --- a/pkgs/development/r-modules/bioc-packages.nix +++ b/pkgs/development/r-modules/bioc-packages.nix @@ -38,7 +38,7 @@ in with self; { AnnotationForge = derive2 { name="AnnotationForge"; version="1.20.0"; sha256="01vbrf76vqfvxh6vpfxkjwccxggnha3byqzj333glqz2b6kwx5q1"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; }; AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.28.0"; sha256="1g6y7bwk573yaays0fmlicxq2452sli0kv41bq8sh4ja2l5jh5i6"; depends=[AnnotationDbi DBI]; }; AnnotationHub = derive2 { name="AnnotationHub"; version="2.10.1"; sha256="14v8g44a6zg9j2rwn9x9y8509k0wr2cw8yccliz24glplb40wva4"; depends=[AnnotationDbi BiocGenerics BiocInstaller curl httr interactiveDisplayBase RSQLite S4Vectors yaml]; }; - AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.8.0"; sha256="1nsai8a2vf5jwczd4k3vbdd9xbn6dfg6dydvf4byklxj6pk6vi97"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocInstaller biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges GEOquery IRanges jsonlite OrganismDbi rBiopaxParser RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; }; + AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.8.1"; sha256="08pvswszxnbr6b3amg2g2353iil2bm9bs571c6lf4v8z0z1by8g5"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocInstaller biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges GEOquery IRanges jsonlite OrganismDbi rBiopaxParser RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; }; ArrayExpress = derive2 { name="ArrayExpress"; version="1.38.0"; sha256="01kb4322pfl9w6za6glb777hdyc8j36xs6flz3b11n1mjryipz7c"; depends=[Biobase limma oligo XML]; }; ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.28.0"; sha256="04qnxgywyxww8xd6r8vgy8sglbixd25749dmbsw0wgqk6zcgysim"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops DESeq edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; }; ArrayTV = derive2 { name="ArrayTV"; version="1.16.0"; sha256="1hn5dngk4civwzx1w2py1n9g1k1jv3kwrj6z6ysvfsfi4q668341"; depends=[DNAcopy foreach oligoClasses S4Vectors]; }; @@ -47,7 +47,7 @@ in with self; { BAC = derive2 { name="BAC"; version="1.38.0"; sha256="04s7fbb8b4is97alj64p86jnh1lgf4a0n02wg3g9rvd75jxmzbai"; depends=[]; }; BADER = derive2 { name="BADER"; version="1.16.0"; sha256="05p006rqydnvz5a8gdbara9fsyn51b5flc05j593bvvlmkc6anl5"; depends=[]; }; BAGS = derive2 { name="BAGS"; version="2.18.0"; sha256="1qhmrz6ffhhsbnmcc0xmb64psv50b1jd1gxkjhhv479mcfl6mk06"; depends=[Biobase breastCancerVDX]; }; - BASiCS = derive2 { name="BASiCS"; version="1.0.0"; sha256="15yby5dz0hizr76bpa5clrpfh1ycvpkk11i7y7ak164ikzxvvmd9"; depends=[BiocGenerics coda data_table KernSmooth matrixStats Rcpp RcppArmadillo S4Vectors scran SingleCellExperiment SummarizedExperiment testthat]; }; + BASiCS = derive2 { name="BASiCS"; version="1.0.1"; sha256="02acpq0mrdr8l3xa3k32k2mq8k96c95gm9603m5z5z3x3npjdzq7"; depends=[BiocGenerics coda data_table KernSmooth matrixStats Rcpp RcppArmadillo S4Vectors scran SingleCellExperiment SummarizedExperiment testthat]; }; BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.8.0"; sha256="0fv5gyzfv0093dlyrlci9d88fcb0ifgljxwivrxpkbbsll5vrpxh"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; }; BCRANK = derive2 { name="BCRANK"; version="1.40.0"; sha256="0vbjskazhm5v4lmwdc456r5vl2v848ldqrzbdjrdxjlvd72wfprw"; depends=[Biostrings]; }; BEAT = derive2 { name="BEAT"; version="1.16.0"; sha256="0x4k45qgzwv6m00zq1jhbhc2aa5slgg5p4g8g909vajc75fpp6g7"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; }; @@ -83,13 +83,13 @@ in with self; { Biobase = derive2 { name="Biobase"; version="2.38.0"; sha256="1cgm1ja1kp56zdlzyy9ggbkfn8r2vbsd4hncmz8g4hjd47fg18kg"; depends=[BiocGenerics]; }; BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.40.0"; sha256="0hwmqv8nimc8gl1c5a72ckmgag5j8886ab62i1irlkfis5x2rj8m"; depends=[Biobase]; }; BiocCheck = derive2 { name="BiocCheck"; version="1.14.0"; sha256="1nzp8kgw13z9pgf885rplj6k37jcldfhbz0adqclxr2gq0yalmyx"; depends=[BiocInstaller biocViews codetools graph httr optparse stringdist]; }; - BiocFileCache = derive2 { name="BiocFileCache"; version="1.2.2"; sha256="111rrzz366kmqs1v8jx5ck0kb0xs42f250m5i0sn65ypvg9ag504"; depends=[DBI dbplyr dplyr httr rappdirs RSQLite]; }; + BiocFileCache = derive2 { name="BiocFileCache"; version="1.2.3"; sha256="0fam0j8kwf9kfbvh4h7q4m53via75c5wnbn2g55cv3d37hikbpsm"; depends=[DBI dbplyr dplyr httr rappdirs RSQLite]; }; BiocGenerics = derive2 { name="BiocGenerics"; version="0.24.0"; sha256="03wxvhxyrhipbgcg83lqlfn7p9gbzzrnl48y0dq7303xgp232zai"; depends=[]; }; BiocInstaller = derive2 { name="BiocInstaller"; version="1.28.0"; sha256="19fga27bv6q9v5mpil74y76lahmnwvpg2h33rdx1r79nvljkd19d"; depends=[]; }; BiocParallel = derive2 { name="BiocParallel"; version="1.12.0"; sha256="13ng3n2wsgl3fh0v6jnz3vg51k5c1sh44pqdvblcrcd1qyjmmqhd"; depends=[BH futile_logger snow]; }; BiocSklearn = derive2 { name="BiocSklearn"; version="1.0.2"; sha256="1zpfb7g353c01ffldrx7251919r6giy58s19w78jf0bslagblv4y"; depends=[BBmisc knitr reticulate SummarizedExperiment]; }; BiocStyle = derive2 { name="BiocStyle"; version="2.6.1"; sha256="03pp04pkcq99kdv2spzr995h2cxsza7l6w3d4gp4112m06prcybm"; depends=[bookdown knitr rmarkdown yaml]; }; - BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.4.1"; sha256="13xcsd4c2l9jrcbl8axrragk4g2x6sp6xrk5r4gcligdicgxpq9l"; depends=[BiocStyle bookdown git2r httr knitr rmarkdown stringr]; }; + BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.4.2"; sha256="1nfph17y36vkji7yyvmkry134s4naml256p6687ag53klqxvvz7x"; depends=[BiocStyle bookdown git2r httr knitr rmarkdown stringr]; }; Biostrings = derive2 { name="Biostrings"; version="2.46.0"; sha256="0vg50qdlxqcm2d6axjnzg8wh8pr4c5gz03l8bdl0llmwzp0zclzk"; depends=[BiocGenerics IRanges S4Vectors XVector]; }; BitSeq = derive2 { name="BitSeq"; version="1.22.0"; sha256="1xkmvzv2kdla3mrarlw21w1hz788w71443jbn36a8dc4p6wrnxhy"; depends=[IRanges Rsamtools S4Vectors zlibbioc]; }; BrainStars = derive2 { name="BrainStars"; version="1.22.0"; sha256="0fipnpjpsp462dsfsvcrnysca4vsq2k6z15a6mxfxvqs1gybhvvj"; depends=[Biobase RCurl RJSONIO]; }; @@ -129,7 +129,7 @@ in with self; { CNVtools = derive2 { name="CNVtools"; version="1.72.0"; sha256="0ihmgg5f0p7yhg0273jb785fcrhcw704vz8r6ban8c63wk0qbqb5"; depends=[survival]; }; CODEX = derive2 { name="CODEX"; version="1.10.0"; sha256="1knfgii0n8grn4436aksk7f2xkk93ih2snvrp7p8pkr206kqadnq"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; }; COHCAP = derive2 { name="COHCAP"; version="1.24.0"; sha256="1ggxn35hif4x4k1rbnxinf0pdqbg1n53wym9rm5zs6cnya4aimgj"; depends=[COHCAPanno gplots RColorBrewer WriteXLS]; }; - COMPASS = derive2 { name="COMPASS"; version="1.16.0"; sha256="1x1vcn37nr4mcx5q8zahyg654gbx0srxckxvz6shvprpdvgs83sn"; depends=[abind clue data_table dplyr knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang scales tidyr]; }; + COMPASS = derive2 { name="COMPASS"; version="1.16.2"; sha256="1g9y5gryy1r8sg75008v3b2a1l2wkxvf8h5bnljnkc0wsd4f4nvb"; depends=[abind clue data_table dplyr knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang scales tidyr]; }; CONFESS = derive2 { name="CONFESS"; version="1.6.0"; sha256="0kmvhwyzxz9ahvvzicigxal3r4ya8y5i090m7pi7d1p5arir7djl"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; }; CORREP = derive2 { name="CORREP"; version="1.44.0"; sha256="10bjv02x2xzanajfbsvbxd7s2s07z0gydx1ypmbfym41jjwac9ra"; depends=[e1071]; }; COSNet = derive2 { name="COSNet"; version="1.12.0"; sha256="0x5kg4c5ml7ndqq81k5jy07fyra4q6nhhly6v7qd98gpmvrj6gnk"; depends=[]; }; @@ -193,7 +193,7 @@ in with self; { DEP = derive2 { name="DEP"; version="1.0.1"; sha256="0glkq6xlhcsr364zl4nkc7g3gnscv0yb3kcyvhzgm3bbfvd9q7ac"; depends=[assertthat Biobase broom circlize ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; }; DESeq = derive2 { name="DESeq"; version="1.30.0"; sha256="0mn5w3cy16iwwk8zxs7za6aa6cnrca75z0g45zd5zh1py5d7nfv9"; depends=[Biobase BiocGenerics genefilter geneplotter lattice locfit MASS RColorBrewer]; }; DESeq2 = derive2 { name="DESeq2"; version="1.18.1"; sha256="1iyimg1s0x5pdmvl8x08s8h0v019y0nhjzs50chagbpk2x91fsmv"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 Hmisc IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; - DEXSeq = derive2 { name="DEXSeq"; version="1.24.3"; sha256="0xip73hlbr3zry9d7ly9vvvsbb3xjcmfa09lr9fdy528dwjrf084"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; + DEXSeq = derive2 { name="DEXSeq"; version="1.24.4"; sha256="1a80yv742fx5c7qav7imsdybphf0d5bixsqyf8w5zng7fk8j16d5"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; DEsubs = derive2 { name="DEsubs"; version="1.4.0"; sha256="1i9blymzj18r9646vac9grrjxw6xar8m6chn1dgdila17jag1wlp"; depends=[circlize DESeq DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL samr]; }; DFP = derive2 { name="DFP"; version="1.36.0"; sha256="117gmzcgr9wr9wb7g0rm7wlrakd76ys1frhmhx1k6ps97ibxlz1k"; depends=[Biobase]; }; DMCHMM = derive2 { name="DMCHMM"; version="1.0.0"; sha256="1y0wmxks51h0d21v8g4mryq7kzq49khhpa88fbhza9xp2bmwk358"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; }; @@ -242,8 +242,8 @@ in with self; { ENmix = derive2 { name="ENmix"; version="1.14.0"; sha256="117jp47hpm276x4q25jwqfagymvay0qk3ji5l9xvrj74piwqpgwh"; depends=[doParallel foreach geneplotter impute MASS minfi preprocessCore SummarizedExperiment sva wateRmelon]; }; EasyqpcR = derive2 { name="EasyqpcR"; version="1.20.0"; sha256="06lmq3pp0j86rv9bgs809r30qscgpxv5vjbkccf32q9wv82vd7hw"; depends=[gWidgetsRGtk2 matrixStats plotrix plyr]; }; EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.6.0"; sha256="1wv1anm4bwm2kqi9lqn06bl1w17q6wvc1v2amrifbqjbmi5k7g8y"; depends=[]; }; - EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.9.2"; sha256="0ffyb40qcvpjqval78146w8wvk3ng7v1ipdwnqkzj705gqkwbw9y"; depends=[ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; }; - EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.8.6"; sha256="1vxnl0n34ygl4fx28s8zmp71b8hidlp4sn34k1cfkw7hiaf2gg9n"; depends=[AnnotationDbi BiocFileCache biocGraph ComplexHeatmap DESeq2 EDASeq edgeR geneplotter GO_db graph GSEABase hwriter KEGGgraph KEGGREST limma MASS pathview rappdirs ReportingTools Rgraphviz S4Vectors safe SPIA SummarizedExperiment topGO]; }; + EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.9.4"; sha256="03n7w56r14y3jrrsdl2awcan5d0hsn3kd8900lrj015pmgf2r9d0"; depends=[circlize ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; }; + EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.8.7"; sha256="12wrxbp14ahjjph85g040f72yk4j47svsyyv7b9s56mkc513vd6v"; depends=[AnnotationDbi BiocFileCache biocGraph ComplexHeatmap DESeq2 EDASeq edgeR geneplotter GO_db graph GSEABase hwriter KEGGgraph KEGGREST limma MASS pathview rappdirs ReportingTools Rgraphviz S4Vectors safe SPIA SummarizedExperiment topGO]; }; EpiDISH = derive2 { name="EpiDISH"; version="1.0.0"; sha256="065bvrfsssf5y4j9axqdcybqb5i8y2hnl09f9jr44bpbay34ay5f"; depends=[e1071 MASS quadprog]; }; EventPointer = derive2 { name="EventPointer"; version="1.2.0"; sha256="1yh6yhaf8c2rp8f4ipsk014552pplb28cl5z7wjwvarjb21waj05"; depends=[affxparser doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges graph igraph limma MASS Matrix matrixStats nnls prodlim RBGL S4Vectors SGSeq stringr SummarizedExperiment]; }; ExiMiR = derive2 { name="ExiMiR"; version="2.20.0"; sha256="0saxway680972dmn6q1gbbmkxcwv08hl2bq973qbyrv5drg6g4vv"; depends=[affy affyio Biobase limma preprocessCore]; }; @@ -298,10 +298,10 @@ in with self; { GSRI = derive2 { name="GSRI"; version="2.26.0"; sha256="12silcf67r3ni40g7vsc7iv15arzy7w12abpj2xcjfd9nr4d84js"; depends=[Biobase fdrtool genefilter GSEABase les]; }; GSReg = derive2 { name="GSReg"; version="1.12.0"; sha256="1rdzkv6kf14shfddvrz3pssjgr6pvg6is4lzcvjzrxai4y34n0y6"; depends=[AnnotationDbi GenomicFeatures Homo_sapiens org_Hs_eg_db]; }; GSVA = derive2 { name="GSVA"; version="1.26.0"; sha256="1zvi0w7clm5qg6fv6akqw4cx84kswcgzfzjdkhxsrid0l4hwmw09"; depends=[Biobase BiocGenerics geneplotter GSEABase shiny shinythemes]; }; - GUIDEseq = derive2 { name="GUIDEseq"; version="1.8.0"; sha256="1xsjz3mq6iawspdz1rif3fb8j2h92ykfrjj3lzlcsnvg92bnlczq"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; }; + GUIDEseq = derive2 { name="GUIDEseq"; version="1.8.1"; sha256="1vx24scbwr4xqhza4q90jpw3xv1pyd7afbqlxijy2fv4p1fzwi4h"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; }; GWASTools = derive2 { name="GWASTools"; version="1.24.1"; sha256="1x8p32f47fki2kl0pkjv4v7az8s1b6zwqjnxywfxy0drs9g6lky4"; depends=[Biobase DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; }; GenRank = derive2 { name="GenRank"; version="1.6.0"; sha256="071k23qknpd46x22bj2cmp07mmxj22higw8ma4b0a8w0wmd05bwz"; depends=[matrixStats reshape2 survcomp]; }; - GenVisR = derive2 { name="GenVisR"; version="1.8.0"; sha256="03jc5qz1xfqpbll8qbs5ib7g70s21crmggc9a6xi9nvjq8ky05r6"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings DBI FField GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales viridis]; }; + GenVisR = derive2 { name="GenVisR"; version="1.8.1"; sha256="0c8dm4k2fn4g7vpjvd452vx0a1xb4rp5w1ii1h4q96957s8s52hj"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings DBI FField GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales viridis]; }; GeneAnswers = derive2 { name="GeneAnswers"; version="2.20.0"; sha256="11bdc59ybi1kck3jkzilf0vmql6a3k97b1f9h940h28mhgn5x9w6"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; }; GeneBreak = derive2 { name="GeneBreak"; version="1.8.0"; sha256="1157crj12c3girr6973a24ph15rfjw0vcakr42fpx7yhhirs89lb"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.24.0"; sha256="1l8829axy6fp29bkqlwbjcsajq99yb86yp5cc8211zprlhlxb30i"; depends=[Biobase PGSEA]; }; @@ -318,7 +318,7 @@ in with self; { GenoGAM = derive2 { name="GenoGAM"; version="1.6.0"; sha256="1dvaapinarpgn3i63iqhdbjh9mc5h7sgdxwlv9d55l42d1jyj6h3"; depends=[BiocParallel Biostrings data_table DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges IRanges mgcv reshape2 Rsamtools S4Vectors SummarizedExperiment]; }; GenomeGraphs = derive2 { name="GenomeGraphs"; version="1.38.0"; sha256="15p75cbbgwgcc3awyvawkah491yim0rp73af815pfiai11a51i4m"; depends=[biomaRt]; }; GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.14.0"; sha256="1jhm0imkac4gvchbjxj408aakk39xdv2fyh818d3lk295bz6bnyp"; depends=[BiocGenerics GenomeInfoDbData IRanges RCurl S4Vectors]; }; - GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.14.1"; sha256="033p6fw46sn7w2yyn14nb9qcnkf30cl0nv6zh014ixflm3iifz39"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; + GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.14.2"; sha256="1659nj1xps7vliy5955i51x6hvrf16n1z0dfh10mmpaaswn2d2mv"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.2.0"; sha256="0ndzpzripibx38nk40xpz4xkghhr4an3skqdhfh8479jk2fnfwjd"; depends=[data_table GenomicRanges httr IRanges jsonlite lazyeval magrittr readr xml2]; }; GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.30.3"; sha256="010vn8hlwbnw12pd1d8pv6m12yp3xwx557gba5rbjq9p4qypnn3z"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RMySQL RSQLite rtracklayer S4Vectors XVector]; }; GenomicFiles = derive2 { name="GenomicFiles"; version="1.14.0"; sha256="0r0wmrs5jycf1kckhnc2sgjmp336srlcjdkpbb1ymm7kazdd0s9n"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; @@ -352,7 +352,7 @@ in with self; { Heatplus = derive2 { name="Heatplus"; version="2.24.0"; sha256="0lil1yfqqga9l6qrgismngvary4495zmi4yk01izpcx29pk8zn6n"; depends=[RColorBrewer]; }; HelloRanges = derive2 { name="HelloRanges"; version="1.4.0"; sha256="0pbikr79lh6iij044sy6fw6i2bqigmna4hb806kyihclpm0rs3y2"; depends=[BiocGenerics Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; HiCcompare = derive2 { name="HiCcompare"; version="1.0.0"; sha256="1r25l4q7rpzjhz02ys78a4p8ga3wrd231znk84pp7xgka3xpprv0"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap QDNAseq S4Vectors]; }; - HiTC = derive2 { name="HiTC"; version="1.22.0"; sha256="0288xa1jy6nzvz2ha07csmp6dirjw5r7p9vy69q2wsbyzr02ymkp"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; + HiTC = derive2 { name="HiTC"; version="1.22.1"; sha256="0da1jw9my2n2gihs31zyn14wwr23d8v2vij39ll7rm6fma3ydfbl"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; HilbertCurve = derive2 { name="HilbertCurve"; version="1.9.1"; sha256="1k3l3i8fpfhzsdwrlkyp7k8rpkyg51lx6c776vd8nm4f2nqn7z36"; depends=[circlize GenomicRanges HilbertVis IRanges png]; }; HilbertVis = derive2 { name="HilbertVis"; version="1.36.0"; sha256="1yilvi5pcr0z5h0n0mf7hfrjc7cl44vn6svczlmw57n8pxf8p35g"; depends=[lattice]; }; HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.36.0"; sha256="12bwk0lj2s6jgrpwigc4jd80irzxqjwc8smq1dhsm6pj62v0gvlk"; depends=[HilbertVis]; }; @@ -420,7 +420,7 @@ in with self; { MBCB = derive2 { name="MBCB"; version="1.32.0"; sha256="0amqmzi54dvkgzylavy0dbv973s2p02jppd5vzqzkrqs8amb3r4c"; depends=[preprocessCore tcltk2]; }; MBttest = derive2 { name="MBttest"; version="1.5.0"; sha256="0gswdh61mmqn7h4d6vwvis08lxx383ynj6pk2va3z8bn25qki5lz"; depends=[gplots gtools]; }; MCRestimate = derive2 { name="MCRestimate"; version="2.34.0"; sha256="1n4abpm6ld4ap87pgrv3mfr1aycdjb4hjg3fm699rckyl9qynjr3"; depends=[Biobase e1071 golubEsets pamr randomForest RColorBrewer]; }; - MCbiclust = derive2 { name="MCbiclust"; version="1.2.1"; sha256="1yqm6fwap4553nmh1dl3vg87hixljzm097wcv4l6sd5sd0sg63c7"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; }; + MCbiclust = derive2 { name="MCbiclust"; version="1.2.2"; sha256="0xll7qdg8cf854yzwxmzvd8xh0pjzkq9x9fskcsv7brm25ar6ghv"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; }; MEAL = derive2 { name="MEAL"; version="1.8.0"; sha256="0mccjr21jvmwlszhb9qixm7dr83gkhm2hjh9yrn11d22cm9r6g1q"; depends=[Biobase BiocGenerics DMRcate doParallel GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl MultiDataSet permute S4Vectors SmartSVA SNPassoc snpStats SummarizedExperiment vegan]; }; MEDIPS = derive2 { name="MEDIPS"; version="1.30.0"; sha256="06mm424g3rc8j64wfyv6w40m106wifzhi91nsbpi317fg98qfd3d"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; MEDME = derive2 { name="MEDME"; version="1.38.0"; sha256="137p9z1g3z4r7q3nsrpsp2gbm657nrbrrq96ph1mykvv41ylq59p"; depends=[Biostrings drc MASS]; }; @@ -428,9 +428,9 @@ in with self; { MGFM = derive2 { name="MGFM"; version="1.12.0"; sha256="0yjr14anr5rny6g1508nrw905d4b01jh34vpwi8737p1q4d9bzis"; depends=[annotate AnnotationDbi]; }; MGFR = derive2 { name="MGFR"; version="1.4.0"; sha256="04nxg65m1s8qyq8sbs8733d541r0vcmabz27w03vs87f0dbxhg11"; depends=[annotate biomaRt]; }; MIGSA = derive2 { name="MIGSA"; version="1.2.0"; sha256="0ih5i1acb7igbcqk7wykxhncvl5vbgx34gl5nqc65adpqb0199fl"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase limma matrixStats mGSZ org_Hs_eg_db RBGL reshape2 Rgraphviz RJSONIO vegan]; }; - MIMOSA = derive2 { name="MIMOSA"; version="1.16.0"; sha256="0rnxr7gxcps2raxka8c2x58liwwc75acwpahi2xc1dl8c2z4jpvx"; depends=[Biobase coda data_table Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape scales testthat]; }; + MIMOSA = derive2 { name="MIMOSA"; version="1.16.1"; sha256="1fsjpqpv32ps8pyj1mjkhrpikchhmm3l06yyjqy3bgrfa1ch36vx"; depends=[Biobase coda data_table Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape scales testthat]; }; MIRA = derive2 { name="MIRA"; version="1.0.1"; sha256="0dapp1q6vrdixz8n2g6ivav4d4si3wg1na7cg5jirb22mwi2rrpk"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; }; - MLInterfaces = derive2 { name="MLInterfaces"; version="1.58.0"; sha256="1py603bykvnzyq15rcqvq1nly3l6chh5zh6x4biwdn0smyjlnkns"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer rda rpart sfsmisc shiny threejs]; }; + MLInterfaces = derive2 { name="MLInterfaces"; version="1.58.1"; sha256="0hran4cavh1zlzwjwpmmd13qsx95z7kf8pqmh7w1pb36isj2z3hy"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer rda rpart sfsmisc shiny threejs]; }; MLP = derive2 { name="MLP"; version="1.26.0"; sha256="0mhaw39rbzrnrminvsiq6vrdrmf3zm2zqg3ilnsq1zw8bm2bsbh7"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; }; MLSeq = derive2 { name="MLSeq"; version="1.18.0"; sha256="1r6b33ic2lnj3v2qzs7r904rfyibz96yr35mgpiz4zzsax4ar6v4"; depends=[Biobase caret DESeq2 edgeR limma randomForest]; }; MMDiff2 = derive2 { name="MMDiff2"; version="1.6.0"; sha256="13f96dw630hadqa0z83ispdni728g7zl12xj8zxrf5hvw1c1hs2h"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; }; @@ -468,7 +468,7 @@ in with self; { MiRaGE = derive2 { name="MiRaGE"; version="1.20.0"; sha256="1jbs427vpld18l83s5dngijc8rgllqvrili8gv4in20nr6dyk9hi"; depends=[AnnotationDbi Biobase BiocGenerics S4Vectors]; }; MineICA = derive2 { name="MineICA"; version="1.18.0"; sha256="1zdq5i14ksm8rirbry6j1dh56r1bhy5yvfzrxfjkm94lynqcdpdy"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; }; MinimumDistance = derive2 { name="MinimumDistance"; version="1.22.0"; sha256="1j2g0ji1ac9608b965rr9vvbhlcbvirqypngh11havh3vn54m9rf"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; }; - Mirsynergy = derive2 { name="Mirsynergy"; version="1.14.0"; sha256="1mwcv1fb3vda4ilmvwjrwb2qg65bgdxsvd2jd9ndaccxb7m3c2lk"; depends=[ggplot2 gridExtra igraph Matrix RColorBrewer reshape scales]; }; + Mirsynergy = derive2 { name="Mirsynergy"; version="1.14.1"; sha256="09hg5mak0ba0vifix5s0nq7md4hjldmar23jyxz5da1lp22cza9i"; depends=[ggplot2 gridExtra igraph Matrix RColorBrewer reshape scales]; }; MmPalateMiRNA = derive2 { name="MmPalateMiRNA"; version="1.28.0"; sha256="058nvymnnzd61a7x2vpzic1s2nm3q520cnfdhd6i09isg6kqr6c8"; depends=[Biobase lattice limma statmod vsn xtable]; }; MoPS = derive2 { name="MoPS"; version="1.12.0"; sha256="0g4awrm90kjnk66b291y2n5vwwwzpdb3kaq96sxfc5a1af8q5q81"; depends=[Biobase]; }; MoonlightR = derive2 { name="MoonlightR"; version="1.4.0"; sha256="0kisic6bzp2gy1yjg717izbkirlvrwb1wndckd2yvncrjzpidcq6"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; }; @@ -478,7 +478,7 @@ in with self; { MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.4.9"; sha256="0kbr2nfxkny9y6hgijr2xpzczs0ijv0g7nh37yrzgkh10rwjsflq"; depends=[Biobase BiocGenerics GenomicRanges IRanges reshape2 S4Vectors shiny shinydashboard SummarizedExperiment tidyr]; }; MultiDataSet = derive2 { name="MultiDataSet"; version="1.6.0"; sha256="0h187dkqn63m6askai30x31va24hiv4ig0kxvp9xraz7n9zfr24g"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggrepel IRanges limma qqman S4Vectors SummarizedExperiment]; }; MultiMed = derive2 { name="MultiMed"; version="1.12.0"; sha256="1b48iv34bnsbyg7j70kwi8iyikc1hxlcfmaxsc97249dfq71rfab"; depends=[]; }; - MutationalPatterns = derive2 { name="MutationalPatterns"; version="1.4.2"; sha256="08ay9h5cqsi8ypb6r0g4rfa5l1g06jgfzl64wmhgz134yqbl7vfv"; depends=[BiocGenerics Biostrings cowplot GenomeInfoDb GenomicRanges ggdendro ggplot2 gridExtra IRanges NMF plyr pracma reshape2 S4Vectors SummarizedExperiment VariantAnnotation]; }; + MutationalPatterns = derive2 { name="MutationalPatterns"; version="1.4.3"; sha256="0ml4gsp5dfv23xqrknxh25q8q65hly1xb1215lcwyc8hj9z8f941"; depends=[BiocGenerics Biostrings cowplot GenomeInfoDb GenomicRanges ggdendro ggplot2 IRanges NMF plyr pracma reshape2 S4Vectors SummarizedExperiment VariantAnnotation]; }; NADfinder = derive2 { name="NADfinder"; version="1.2.0"; sha256="0npzbgbpwir4jv8h4giar9w8vjy3rivk55bimqd9bq7m83iwqapq"; depends=[baseline BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; }; NCIgraph = derive2 { name="NCIgraph"; version="1.26.0"; sha256="094dnqj1gss4dh8hsc8y9k98b0g33n7yy714kjavcd16glp4w7i0"; depends=[graph KEGGgraph R_methodsS3 RBGL RCy3]; }; NGScopy = derive2 { name="NGScopy"; version="1.12.0"; sha256="1aibq3rbs52vyhcx388p7szax7v8ac023pxayqmn2xq3kzj172ah"; depends=[changepoint rbamtools Xmisc]; }; @@ -501,7 +501,7 @@ in with self; { OmicCircos = derive2 { name="OmicCircos"; version="1.16.0"; sha256="13dw36n0lg5cafsrgkgr65al6y7jij2clyf1wzidn05p508i02m3"; depends=[GenomicRanges]; }; OmicsMarkeR = derive2 { name="OmicsMarkeR"; version="1.10.0"; sha256="0s7zyj3xkr74w0jw604hv3v775kqjpdgks4gkkrkfa3a1xj7xa5b"; depends=[assertive assertive_base caret caTools data_table DiscriMiner e1071 foreach gbm glmnet pamr permute plyr randomForest]; }; Onassis = derive2 { name="Onassis"; version="1.0.1"; sha256="11sq6f3qcq37i4blml024kb24ifcq1xplklv2i9c55wg299ni620"; depends=[AnnotationDbi data_table GEOmetadb OnassisJavaLibs rJava RSQLite SRAdb]; }; - OncoScore = derive2 { name="OncoScore"; version="1.6.0"; sha256="02vzvvdnisx3xhr7428xdclgx90apa49h64bvp2h3nsa0vnhnj9l"; depends=[biomaRt]; }; + OncoScore = derive2 { name="OncoScore"; version="1.6.2"; sha256="0lv3rx92fslikv79cpib839wbhj7v3ad869n50frqylyp6kn5nyg"; depends=[biomaRt]; }; OncoSimulR = derive2 { name="OncoSimulR"; version="2.8.0"; sha256="1b0myymp38j6fbd4y8ppwmsj8v9w96g8wayc20bcygm16i1zjm5k"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph nem RColorBrewer Rcpp Rgraphviz smatr]; }; OperaMate = derive2 { name="OperaMate"; version="1.9.0"; sha256="11ah55sl04gm8hq3gkcz3b4shq4dxdpwlwl0wn4j82ciai0k6wsm"; depends=[fBasics ggplot2 gProfileR gridExtra pheatmap reshape2 stabledist]; }; OrderedList = derive2 { name="OrderedList"; version="1.50.0"; sha256="1sk9ni3vyixb3vwn86vz174lfd7n7rnc8jmm1fx94pjsp9r6sbgr"; depends=[Biobase twilight]; }; @@ -538,10 +538,10 @@ in with self; { PathoStat = derive2 { name="PathoStat"; version="1.4.1"; sha256="1al0h4mw5lsmn4n3d76d8p9px62l4y5c5z78md2zchnam3x9ii78"; depends=[alluvial ape BatchQC BiocStyle corpcor DESeq2 dplyr DT edgeR ggplot2 gtools knitr limma matrixStats MCMCpack pander phyloseq plyr preprocessCore rentrez reshape2 rmarkdown scales shiny tidyr XML]; }; PathwaySplice = derive2 { name="PathwaySplice"; version="1.0.0"; sha256="1yi302xjf355xi14vx5rl6qyrm35qz9llf48fwrj7ycb41vla0fj"; depends=[AnnotationDbi AnnotationHub BiasedUrn Biobase BiocGenerics DOSE dplyr ensembldb gdata geneLenDataBase GO_db goseq gplots gridExtra htmlwidgets igraph JunctionSeq mgcv org_Hs_eg_db org_Mm_eg_db plotly RColorBrewer reshape2 S4Vectors tibble VennDiagram webshot]; }; Pbase = derive2 { name="Pbase"; version="0.18.0"; sha256="17ya1mmz8dqrr81vcfy3ygw490bwg26xkj72mcmba17cyy0nv11x"; depends=[AnnotationFilter Biobase BiocGenerics BiocParallel biomaRt Biostrings cleaver ensembldb GenomicRanges Gviz IRanges MSnbase mzID mzR Pviz Rcpp rtracklayer S4Vectors]; }; - PharmacoGx = derive2 { name="PharmacoGx"; version="1.8.2"; sha256="0w77wpvi4qs8ngf5404m2cgac9zfj4jvkh88xcrz7zmmjmg2wvb9"; depends=[Biobase caTools downloader lsa magicaxis piano RColorBrewer reshape2]; }; + PharmacoGx = derive2 { name="PharmacoGx"; version="1.8.3"; sha256="1lax2naj6qcjp4fy640m9pflvi2y1aqbsh5m9j2mpphy6a1dlvmh"; depends=[Biobase caTools downloader lsa magicaxis piano RColorBrewer reshape2]; }; PhenStat = derive2 { name="PhenStat"; version="2.14.0"; sha256="1hjj1i083ihi7c1lc1rrh3k7513xcqpybn3aaivdjw66pi1bg7vp"; depends=[car corrplot ggplot2 graph knitr lme4 logistf MASS msgps nlme nortest pingr reshape SmoothWin]; }; Pi = derive2 { name="Pi"; version="1.6.2"; sha256="0x3b5cs7r4cjvjjc2gx7xapzlkvg56784aj04zg6271hldpcd84j"; depends=[caret dnet GenomeInfoDb GenomicRanges ggbio ggplot2 ggrepel glmnet Gviz igraph lattice MASS Matrix plot3D randomForest ROCR scales supraHex XGR]; }; - Pigengene = derive2 { name="Pigengene"; version="1.4.2"; sha256="15wnq91k360jblns36dgx4a24jk6a7rwkj342ja0sgfc6kvwvvqb"; depends=[bnlearn C50 GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; }; + Pigengene = derive2 { name="Pigengene"; version="1.4.20"; sha256="13pzgzls2k48h31h25n2rw028n97xaxfxlb4dq49ndwy5874cbzb"; depends=[bnlearn C50 GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; }; Polyfit = derive2 { name="Polyfit"; version="1.12.0"; sha256="1gkn6g5hwa8ss156armxam9ky5fd7dj0k3gh1b0gy5plpzzyzv1h"; depends=[DESeq]; }; Prize = derive2 { name="Prize"; version="1.8.0"; sha256="1vaf4n69pb2sa6fd79988picz08d3c46cjmxfr5qf7hxay9lbwc6"; depends=[diagram ggplot2 gplots matrixcalc reshape2 stringr]; }; ProCoNA = derive2 { name="ProCoNA"; version="1.16.0"; sha256="06jlzcr9b6nfrlgb1wqxp7r2z8042ygjx4d2z7jzg07hqn3gymjz"; depends=[BiocGenerics flashClust GOstats MSnbase WGCNA]; }; @@ -562,7 +562,7 @@ in with self; { RBGL = derive2 { name="RBGL"; version="1.54.0"; sha256="18jad23i3899ypv4bg3l47cvvs3qnj1pqis2p9x0135yv5y6wnv7"; depends=[graph]; }; RBM = derive2 { name="RBM"; version="1.10.0"; sha256="1nqmf9yiaam767f2wkwggnw6v0rymszx7chnkis0xbdsllzqb0j4"; depends=[limma marray]; }; RBioinf = derive2 { name="RBioinf"; version="1.38.0"; sha256="01qk9ddk8bm9sl70rlwgmrkz2y7dnqzrhi13hhh0ii62s0z0gdwh"; depends=[graph]; }; - RCAS = derive2 { name="RCAS"; version="1.4.3"; sha256="0ajnhi8i9p755lr0l2j5j52d5j6rsilrjhm3zrjr1zsgwqm2an6z"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DBI DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo knitr motifRG org_Hs_eg_db pbapply pheatmap plotly plotrix proxy rmarkdown RSQLite rtracklayer S4Vectors topGO]; }; + RCAS = derive2 { name="RCAS"; version="1.4.4"; sha256="0jnrikh0qhpxgjc6rdgfj9d57x4i5b40wxx7lfafrxdxg60qsy1g"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DBI DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo knitr motifRG org_Hs_eg_db pbapply pheatmap plotly plotrix proxy rmarkdown RSQLite rtracklayer S4Vectors topGO]; }; RCASPAR = derive2 { name="RCASPAR"; version="1.24.0"; sha256="1v19pv81q0g965mks88ablznzhcdk3kfd7j2dgxx4r12bl1afawg"; depends=[]; }; RCy3 = derive2 { name="RCy3"; version="1.8.0"; sha256="09p66zxh82j5pcjz1zn3cg43rpsp0gnkwja836m6g1i450zrialv"; depends=[graph httr RCurl RJSONIO]; }; RCyjs = derive2 { name="RCyjs"; version="1.10.0"; sha256="0vlyh32byw49j3vfw0avknixflpjs5h599xxlbf2zc6irvncg1wg"; depends=[base64enc BiocGenerics BrowserViz graph httpuv igraph jsonlite Rcpp]; }; @@ -577,19 +577,19 @@ in with self; { RIPSeeker = derive2 { name="RIPSeeker"; version="1.18.0"; sha256="0bqkzwrncww7il36273chkd3gfxmii7p566ycki9qij419pwr35y"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; RITAN = derive2 { name="RITAN"; version="1.2.0"; sha256="199kddc19fwkfgqnbhx7v4sl5h6lj6f3wqs5xy9f9n9bg09f5rrf"; depends=[BgeeDB dynamicTreeCut ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png ProNet RColorBrewer reshape2 RITANdata sqldf STRINGdb]; }; RIVER = derive2 { name="RIVER"; version="1.2.0"; sha256="00j9i0hrn0j2i5rxgsax3ixj8pwm2ks9fyvp657yd5amm1vackxq"; depends=[Biobase ggplot2 glmnet pROC]; }; - RImmPort = derive2 { name="RImmPort"; version="1.6.0"; sha256="1fj69k1mb0gbajsiah23azp0ina3wvc43ghr6866glqcfh4xckj7"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; }; + RImmPort = derive2 { name="RImmPort"; version="1.7.2"; sha256="0h3r7q7lfl4z7srmallaldljv2231j3zhxy0d4x9q7ghcfglfnbf"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; }; RJMCMCNucleosomes = derive2 { name="RJMCMCNucleosomes"; version="1.2.0"; sha256="0xjscfbxrrfnd40dmzhrrly0v3pk1k33jdl4z19bslh89gmrmygr"; depends=[BiocGenerics BiocParallel consensusSeekeR GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; RLMM = derive2 { name="RLMM"; version="1.40.0"; sha256="01mbk00fbhzldivxlr5jfy1fgfrdbd657lya3s3p7zxw7z0054a0"; depends=[MASS]; }; RMassBank = derive2 { name="RMassBank"; version="2.6.0"; sha256="1yfnj64ybl95a7bc4980i5h6cvs2hq3nkmj9dklarcp9wfw5p59w"; depends=[Biobase digest MSnbase mzR rcdk Rcpp RCurl rjson S4Vectors XML yaml]; }; RNASeqPower = derive2 { name="RNASeqPower"; version="1.18.0"; sha256="08x58sd6q5xm47ix2f1kkqpgyk10nnbf994i4m1wia8fjhx0hdkm"; depends=[]; }; RNAinteract = derive2 { name="RNAinteract"; version="1.26.0"; sha256="1cscf2izpx924ai0vian9mm528mn1k618zqscss7mry13ik78p3c"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; - RNAither = derive2 { name="RNAither"; version="2.26.0"; sha256="1dyxmk0j319822qf0wwd41xw7v9qdahixkhmsbv3qp6203hp49w5"; depends=[biomaRt car geneplotter limma prada RankProd splots topGO]; }; + RNAither = derive2 { name="RNAither"; version="2.26.1"; sha256="0fs3kab20h77d00kg48rdgslj3fsmnl73qi740sa7xmwx6ra5lc7"; depends=[biomaRt car geneplotter limma prada RankProd splots topGO]; }; RNAprobR = derive2 { name="RNAprobR"; version="1.10.0"; sha256="0lq0cf5g004w2gi8rs29rhdy3p49njmwnw5jhfijfj4hgkgc6caf"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr Rsamtools rtracklayer S4Vectors]; }; ROC = derive2 { name="ROC"; version="1.54.0"; sha256="0a60k93q0zsmj2s4gy9wgzpd5yl9xdv2g62m18z4s4dmr3ykwsdv"; depends=[]; }; ROTS = derive2 { name="ROTS"; version="1.6.0"; sha256="12dqbwqiiz21im45iqf41nm25anf0fffip86glpydwwc0km054jh"; depends=[Biobase Rcpp]; }; ROntoTools = derive2 { name="ROntoTools"; version="2.6.0"; sha256="0lxxqa8syanb9v4nzc93arlwg65zyf4hkgxgw6q4h62mxkabdp0d"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; }; RPA = derive2 { name="RPA"; version="1.34.0"; sha256="1s5d8wpy3n69f9lnsi8avwalbzzvi7v8np6bv3vcnxy3nfx0iqx3"; depends=[affy BiocGenerics phyloseq]; }; - RProtoBufLib = derive2 { name="RProtoBufLib"; version="1.0.1"; sha256="1a8psx12hwbzybkd92k9n3351g24fqqxrmq5x3sln62z2f0c7psw"; depends=[]; }; + RProtoBufLib = derive2 { name="RProtoBufLib"; version="1.0.2"; sha256="14hs5mam4yjcm00zqz5fgmgxzwhw45fniaihch2mwrb6kbys2y68"; depends=[]; }; RRHO = derive2 { name="RRHO"; version="1.18.0"; sha256="1nz643k6bahg1bizw5bgjkpv2hd7hpi87s4kh1z38jqfpfixw9lk"; depends=[VennDiagram]; }; RSVSim = derive2 { name="RSVSim"; version="1.18.0"; sha256="0f2fv2cxwhsl6gvz3dpgk55faymdwxyry6lr3l6f2s8f6rqpnzgf"; depends=[Biostrings GenomicRanges IRanges ShortRead]; }; RTCA = derive2 { name="RTCA"; version="1.30.0"; sha256="0y2vrqfr4qjgsq8f82a5xnfhm835wi5zqf1xlxrv4mpxm9f9jr38"; depends=[Biobase gtools RColorBrewer]; }; @@ -628,7 +628,7 @@ in with self; { Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.0.0"; sha256="0kkc4rprjbqn2wvbx4d49kk9l91vihccxbl4843qr1wqk6v33r1w"; depends=[]; }; Rhtslib = derive2 { name="Rhtslib"; version="1.10.0"; sha256="1dw3p44bfr0m7w39ckc2k37sjcp1zz0b9g12mr8am15jaj6v0q2j"; depends=[zlibbioc]; }; RiboProfiling = derive2 { name="RiboProfiling"; version="1.7.2"; sha256="0yygf098phiakaj8c74c337gbwpd0dh4haabbg2qq1k0qjw4prmp"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; }; - Ringo = derive2 { name="Ringo"; version="1.42.0"; sha256="174zcz86x43yrg9wl1wwdhammgyxhfc3aqas3yqgrdq7vdsnxzxq"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; + Ringo = derive2 { name="Ringo"; version="1.42.1"; sha256="12r4bcn2sivcp68rd7jr4w4a8yz7xdydwx6bv1mi2lp2s2mzf5c5"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; Risa = derive2 { name="Risa"; version="1.20.0"; sha256="10ypbd9qwh1rk27fwm8naf3gl05w9zlw79qyr55pk5m6x5lnn9cb"; depends=[affy Biobase biocViews Rcpp xcms]; }; Rmagpie = derive2 { name="Rmagpie"; version="1.34.0"; sha256="1hvv8pps0q7xnsl33rammqvyj191j5gs78r2333jgscxnw4byqb7"; depends=[Biobase e1071 kernlab pamr]; }; RmiR = derive2 { name="RmiR"; version="1.34.0"; sha256="10n8i7qirbd8xrb73ccxyj7c6bi1szx263nwjh8w2j9x4dgzx22x"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; }; @@ -655,7 +655,7 @@ in with self; { SICtools = derive2 { name="SICtools"; version="1.8.0"; sha256="0n3m3435wa95mld4b57hr31rfhlk41yw1qqi1jdnybkqgdndpqf8"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; }; SIM = derive2 { name="SIM"; version="1.48.0"; sha256="1n207w5idd2v515v8ppsfx7q1wvn2zxy6if7dp2hpr0x2qvxijnf"; depends=[globaltest quantreg quantsmooth]; }; SIMAT = derive2 { name="SIMAT"; version="1.10.0"; sha256="0gd99p8kjf1wn0xygdyppxgddp9bnp3a3grg8za2mmm8xv5r990h"; depends=[ggplot2 mzR Rcpp reshape2]; }; - SIMLR = derive2 { name="SIMLR"; version="1.4.0"; sha256="1sfd32qd39wy8a1206xkazbmvkqwhs09p7fhdn8n59xf56914pfa"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; }; + SIMLR = derive2 { name="SIMLR"; version="1.4.1"; sha256="09siwqc57f0rfx0297hk2jbpvvayhk47wkvapz2ap621ya203b0z"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; }; SISPA = derive2 { name="SISPA"; version="1.8.0"; sha256="18v8fw3l4pxh4fi18fhnqxbd1hlhp2w36s31vf58ffldq3bz1bpb"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; }; SLGI = derive2 { name="SLGI"; version="1.38.0"; sha256="1p0lwzmzz820npnsw9sk6x12innc39qv0ja0di7rplkmsi60z92j"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; }; SLqPCR = derive2 { name="SLqPCR"; version="1.44.0"; sha256="16kvssib1j4d5cn3b350ip2m9m7fcsgm1mgq13wbfnwcd6sx52kb"; depends=[]; }; @@ -669,7 +669,7 @@ in with self; { SPEM = derive2 { name="SPEM"; version="1.18.0"; sha256="05gpj1fykiw8xjcbd6splqkb8jsyksnhzl6g6pzinpbczhslq55a"; depends=[Biobase Rsolnp]; }; SPIA = derive2 { name="SPIA"; version="2.30.0"; sha256="0m2vv6zj0vgd98w2jrlbwbyn998ml2i2wr9160gmq5h77rn91xq3"; depends=[KEGGgraph]; }; SPLINTER = derive2 { name="SPLINTER"; version="1.4.0"; sha256="06xamivcwlpwj6n8c3wzgd5ykh21q2mrdl7zz1bnicq5npha99l9"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges plyr S4Vectors seqLogo]; }; - SPONGE = derive2 { name="SPONGE"; version="1.0.2"; sha256="100gbcysmf3fhn22zmvvx2sck6hhfgc7ar782l822vbsig1vnyk9"; depends=[bigmemory Biobase data_table doRNG expm foreach glmnet gRbase igraph iterators logging MASS ppcor]; }; + SPONGE = derive2 { name="SPONGE"; version="1.0.3"; sha256="1jb7nwji4j9kvnx40hr26qhcn3pbmjaahl4cpvqbljs9pmi9lfdy"; depends=[bigmemory Biobase data_table doRNG expm foreach glmnet gRbase igraph iterators logging MASS ppcor]; }; SQUADD = derive2 { name="SQUADD"; version="1.28.0"; sha256="1z139p0xbaq4gvd9acxnd8dlapdsiaab1fj10pc7wx2iz4dj9zd6"; depends=[RColorBrewer]; }; SRAdb = derive2 { name="SRAdb"; version="1.40.0"; sha256="18aayqid2fhhkjf7anlk34qw3fj3byxsxcrw2lmq4s4mqq06k5vh"; depends=[GEOquery graph RCurl RSQLite]; }; SRGnet = derive2 { name="SRGnet"; version="1.4.0"; sha256="1a2as38svd6vp6pdllir4gs6jqicg7n7ya42ffjgiy2rpnyijbci"; depends=[DMwR EBcoexpress gbm Hmisc igraph limma MASS matrixStats pvclust]; }; @@ -688,7 +688,7 @@ in with self; { SeqArray = derive2 { name="SeqArray"; version="1.18.2"; sha256="05w051i63af4akr6zna9w14bdyi06bpif0vab9yvf6iwq2ag72kz"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; SeqGSEA = derive2 { name="SeqGSEA"; version="1.18.0"; sha256="1vaqa6jkvwxpbqnz9wz3i6p26mky6d7d704cjv5as67j04v99b2a"; depends=[Biobase biomaRt DESeq doParallel]; }; SeqSQC = derive2 { name="SeqSQC"; version="1.0.0"; sha256="0qj1y9zsjxkh08jkw80hl62072viincq1pvcz9r3i0m28nhk7pg5"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges rbokeh RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; }; - SeqVarTools = derive2 { name="SeqVarTools"; version="1.16.0"; sha256="14n70xzj91f4rshl0kx549rqzy9rrv5mv0b0xvj891i8anxahb2n"; depends=[Biobase dplyr gdsfmt GenomicRanges GWASExactHW IRanges logistf S4Vectors SeqArray tidyr]; }; + SeqVarTools = derive2 { name="SeqVarTools"; version="1.16.1"; sha256="0vjgksqyapvkdbnl3af0sjbbraslyc6m7f63sl05m87zdkav8fzz"; depends=[Biobase dplyr gdsfmt GenomicRanges GWASExactHW IRanges logistf S4Vectors SeqArray tidyr]; }; ShortRead = derive2 { name="ShortRead"; version="1.36.1"; sha256="1cyv47632m9ljkxfsvnvmd19sb607ys5kz8fwh6v39dnw16g0a6m"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rsamtools S4Vectors XVector zlibbioc]; }; SigCheck = derive2 { name="SigCheck"; version="2.10.0"; sha256="1k2xmb7jcjbdxafr8fspf9pbc0jwcll914lqc42gvhhjq6rnf8q4"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; }; SigFuge = derive2 { name="SigFuge"; version="1.16.0"; sha256="0ddy6bayb05gsgh06p5awhjwyx57z0l8fb5x6p0dci2fgzy6gr4f"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; }; @@ -708,7 +708,7 @@ in with self; { SwimR = derive2 { name="SwimR"; version="1.16.0"; sha256="033hh3bpkn6qladvn7iz0fvrbphffzy1rkvmi0j32v9n9h88lizz"; depends=[gplots heatmap_plus R2HTML signal]; }; TCC = derive2 { name="TCC"; version="1.18.0"; sha256="10nmha786k85jr93vbnlsxkrr2wiykxa5rl2z5ry49w14fis82m5"; depends=[baySeq DESeq DESeq2 edgeR ROC samr]; }; TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.6.12"; sha256="0pih8jpzffsjlhamfpvgcapa48dq2m86f4hxqr5m5z4vgjd7j1mv"; depends=[biomaRt circlize ComplexHeatmap ConsensusClusterPlus data_table doParallel downloader dplyr EDASeq edgeR genefilter GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel ggthemes gridExtra httr IRanges jsonlite knitr limma matlab plyr R_utils RColorBrewer readr rvest S4Vectors scales selectr stringr SummarizedExperiment survival survminer sva tibble XML xml2]; }; - TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.4.2"; sha256="1g81w346lvws8bcm8w94b1r3jjr1zfg5ln80p0rq69gzv9hkdjyw"; depends=[clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel maftools pathview plotly readr shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks]; }; + TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.4.7"; sha256="1hwq13rsynxv18pzahq54107n2dm0wgbh7a5xizda4zqgf4s50gj"; depends=[clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel maftools pathview plotly readr shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks]; }; TCseq = derive2 { name="TCseq"; version="1.2.0"; sha256="07wbp4caw18g1mf5h40i1c1y7jadfqmx3p7a8zz5rjjibsfa2bw1"; depends=[BiocGenerics cluster e1071 edgeR GenomicAlignments GenomicRanges ggplot2 IRanges locfit reshape2 Rsamtools SummarizedExperiment]; }; TDARACNE = derive2 { name="TDARACNE"; version="1.28.0"; sha256="0agzpgz39ya46kgnz95ff2h0hml2mb14fb3pdj218adas24zq9jf"; depends=[Biobase GenKern Rgraphviz]; }; TEQC = derive2 { name="TEQC"; version="3.18.0"; sha256="0rnqlk677hcf2w3whc9gdqm21gjqf4rsanaw8a847jc7li8isnpj"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; }; @@ -718,7 +718,7 @@ in with self; { TIN = derive2 { name="TIN"; version="1.10.0"; sha256="16lv7k4js3zbak0b1m2mlimd1f56gif3vlm2hpc5vx1y315mz9gd"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; }; TMixClust = derive2 { name="TMixClust"; version="1.0.1"; sha256="1mv9hv5hjg55mwbp824n5b74w8zcb9sv8a1wa6hxmfb00n6wcr4h"; depends=[Biobase BiocParallel cluster flexclust gss mvtnorm SPEM zoo]; }; TPP = derive2 { name="TPP"; version="3.6.0"; sha256="1gma7lfnq1ybcqnl9536wv22advjaqxmysfgamrgn38zwbcwhdi9"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown sme stringr tidyr VennDiagram VGAM]; }; - TRONCO = derive2 { name="TRONCO"; version="2.10.0"; sha256="1lvzfx75z50r8kd3yrcjwzvsg16yi5644rz90bm1l6hpkmw2wcpf"; depends=[bnlearn cgdsr circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; + TRONCO = derive2 { name="TRONCO"; version="2.10.3"; sha256="1kw4j57wri0sm3piinq169pkljfb3ff4vcj1ify2il2pl7va94l4"; depends=[bnlearn cgdsr circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; TReNA = derive2 { name="TReNA"; version="0.99.10"; sha256="1yiq953w6830v1fba4gglnf485m6lis11qlpp9g1jw0x4s0rpg70"; depends=[DBI doParallel flare foreach GenomicRanges glmnet lassopv randomForest RPostgreSQL RSQLite vbsr]; }; TSCAN = derive2 { name="TSCAN"; version="1.16.0"; sha256="0m88r5yg46ra8k6ymzfrk68fqbg2y47kshzgj5flblbay079hnxg"; depends=[combinat fastICA ggplot2 gplots igraph mclust mgcv plyr shiny]; }; TSRchitect = derive2 { name="TSRchitect"; version="1.4.0"; sha256="0qymyjmzpi1n5fpyzw8riz32kwsc2bi1cw3sx9sxvpvhjk45dmyx"; depends=[AnnotationHub BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; @@ -742,7 +742,7 @@ in with self; { VariantTools = derive2 { name="VariantTools"; version="1.20.0"; sha256="1ma1qs9n606a5gjcm8l9fna8vfg5f8ixdzriwaalhys22pyjgqsy"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; Vega = derive2 { name="Vega"; version="1.26.0"; sha256="1kya7h7xa47d7l3svkpnkwjg49izpjfird5fjja6490ynr1a55yd"; depends=[]; }; VegaMC = derive2 { name="VegaMC"; version="3.16.0"; sha256="1lmgmaf4andfxv2z4h2pahyggnic5wj61llzkm8q4k0q7i50l63i"; depends=[Biobase biomaRt genoset]; }; - XBSeq = derive2 { name="XBSeq"; version="1.8.0"; sha256="07123c1wd3l7lj29kaa0d83dlv7zsrx8gk8aag7g0h8k9vlhcni4"; depends=[Biobase DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; }; + XBSeq = derive2 { name="XBSeq"; version="1.10.0"; sha256="0p2f2wckndgrsf0jjcag22i6bgrn2ky78ngdk9c5cvqnxwjcfagz"; depends=[Biobase DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; }; XDE = derive2 { name="XDE"; version="2.24.0"; sha256="11g74znfafp03q710mhmzgxap6f7j04b75jhm7x6lmd6cbwqh25p"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools MergeMaid mvtnorm RColorBrewer siggenes]; }; XVector = derive2 { name="XVector"; version="0.18.0"; sha256="1i4i3kdxr78lr1kcxq657p11ybi7kq10c8kyaqyh6gfc8i9rhvmk"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; YAPSA = derive2 { name="YAPSA"; version="1.4.0"; sha256="0jv940xdqrbb8hw13nm6cky767zn9k8wh6sh5vz5b7hgh7c75kww"; depends=[circlize ComplexHeatmap corrplot dendextend GenomeInfoDb GenomicRanges GetoptLong ggplot2 gridExtra gtrellis KEGGREST lsei PMCMR reshape2 SomaticSignatures VariantAnnotation]; }; @@ -776,11 +776,11 @@ in with self; { anamiR = derive2 { name="anamiR"; version="1.6.1"; sha256="0mxpxangzbvx7rpzm4ak321pcgj6pa0nbslgvh8rplyz4sf6v0z6"; depends=[agricolae DBI DESeq2 gage gplots limma lumi RMySQL S4Vectors SummarizedExperiment]; }; annaffy = derive2 { name="annaffy"; version="1.50.0"; sha256="0qprkcvq56h6dwcylqsa0dq0nmv5bk280j89cwa3brm4jfncs4hm"; depends=[AnnotationDbi Biobase DBI GO_db KEGG_db]; }; annmap = derive2 { name="annmap"; version="1.20.0"; sha256="0q4lcx1j5av5jpn2wmarn7z32clzzdaprvpcagnvv453i11vp5bi"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; }; - annotate = derive2 { name="annotate"; version="1.56.1"; sha256="14c5xd9kasvcwg5gbjys2c1vizxhlqlzxakqc2kml0kw97hmx0rq"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl XML xtable]; }; + annotate = derive2 { name="annotate"; version="1.56.2"; sha256="0ybg9k1s289h15nj1kp9821i1rsk1gkn8i8blplmk7gsgpbw1f42"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl XML xtable]; }; annotationTools = derive2 { name="annotationTools"; version="1.52.0"; sha256="1kmhgasb26dbq10d4r8wig5pjlbiqcqsa12zpgcsasj8kvpr2gpd"; depends=[Biobase]; }; annotatr = derive2 { name="annotatr"; version="1.4.1"; sha256="10izqb0x92fjpsycsyppvz6yidg8ssix452jfni692na7ih564y9"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges org_Dm_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db readr regioneR reshape2 rtracklayer S4Vectors TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Dmelanogaster_UCSC_dm6_ensGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene TxDb_Rnorvegicus_UCSC_rn5_refGene TxDb_Rnorvegicus_UCSC_rn6_refGene]; }; anota = derive2 { name="anota"; version="1.26.0"; sha256="1fvr9yvyf0m7m5dnfbzbm29kd1yqq78carv9v7xx60szi30w4lvq"; depends=[multtest qvalue]; }; - anota2seq = derive2 { name="anota2seq"; version="1.0.0"; sha256="1pcmjlnvx3g2209l54jcbw044k6iz9zch3l01d1vr1cxiqag8smh"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; }; + anota2seq = derive2 { name="anota2seq"; version="1.0.1"; sha256="0fya2plqvpmypm3jf6mwncpi1ngjsprbnadh7j33wdshr4znhyc3"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; }; antiProfiles = derive2 { name="antiProfiles"; version="1.18.0"; sha256="03y6j3y0qvfzwbwzjgjsl5zlqayqj1400gj278m28l70l43ifnyg"; depends=[locfit matrixStats]; }; apComplex = derive2 { name="apComplex"; version="2.44.0"; sha256="132j6gm70h8sma82jd566hrih7npa217h5r6kqx4lq5yw3dlqcs1"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; }; apeglm = derive2 { name="apeglm"; version="1.0.3"; sha256="06j68szmxdr9c8qmmlcx85rv1hjl2rk52lagack83cr3q1gd10bj"; depends=[emdbook GenomicRanges SummarizedExperiment]; }; @@ -844,10 +844,10 @@ in with self; { chipenrich = derive2 { name="chipenrich"; version="2.2.0"; sha256="0q24il68grjqdxpy7qjk6lw6l5zlmw6yybrbrbb8l42gljyi6s74"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; }; chipseq = derive2 { name="chipseq"; version="1.28.0"; sha256="1ymcq77krwjzrkzzcw7i9909cmkqa7c0675z9wzvrrk81hgdssfq"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; chopsticks = derive2 { name="chopsticks"; version="1.42.0"; sha256="0awwk8k7vnsc0c1ic17m2mhmpin0s0ijd2gn7my9yysqzld9sncd"; depends=[survival]; }; - chroGPS = derive2 { name="chroGPS"; version="1.26.0"; sha256="1lx12mlrj1syl2qaibm08b4vq8h2xw609vr6vxynl1wvvf8wdarp"; depends=[Biobase changepoint cluster DPpackage GenomicRanges ICSNP MASS]; }; + chroGPS = derive2 { name="chroGPS"; version="1.27.3"; sha256="0glqisz3nzlrcvjryxf406dkiq6sg9bg1g3bcqqnmayirm92w5qv"; depends=[Biobase changepoint cluster DPpackage GenomicRanges ICSNP MASS]; }; chromDraw = derive2 { name="chromDraw"; version="2.8.0"; sha256="1lqrpbf322kxpx5068mw650ibzqksfmxc4j6q1fs4dv0ghpxdcsf"; depends=[GenomicRanges Rcpp]; }; chromPlot = derive2 { name="chromPlot"; version="1.6.0"; sha256="16qy1zqwlxc2pdkdb1jf8rknvr5cz2k4vbg2jybr6ks73pzagb47"; depends=[biomaRt GenomicRanges]; }; - chromVAR = derive2 { name="chromVAR"; version="1.0.1"; sha256="0a62gp47ymspn9pbdz7j2vjpd0g7bhl333dicbs468qjjfpm8fbw"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; }; + chromVAR = derive2 { name="chromVAR"; version="1.0.2"; sha256="08bp5wyxg5s9gjwnpymcahhy5rar64x385msczam62i1h1y95f8b"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; }; chromstaR = derive2 { name="chromstaR"; version="1.4.0"; sha256="1ky2z9v6gwwgzvd498ng9ac5s7x8nkgm5170gywr7bgw7lqrycjz"; depends=[bamsignals chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; }; chromswitch = derive2 { name="chromswitch"; version="1.0.0"; sha256="1ym7vdj6lfwi4nja38lixm3vsxp296dpb90zwnmabws3dhysxhfy"; depends=[Biobase BiocParallel cluster DescTools dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats mclust NMF rtracklayer S4Vectors tidyr]; }; cisPath = derive2 { name="cisPath"; version="1.18.0"; sha256="0ya1kkvghs23c4rqydkas68a7y6z16ihjnv8ljjy9h3i7pdani4h"; depends=[]; }; @@ -934,7 +934,7 @@ in with self; { eegc = derive2 { name="eegc"; version="1.4.0"; sha256="1v3586qddx1l74ha083x36m3lqdblrhmwd63k22jzfpkh30adz09"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; }; eiR = derive2 { name="eiR"; version="1.18.0"; sha256="1ypd7yq9c6mqp7nm984dm60qzvwy4qb81zrp2mvp7g87c5vdj2a3"; depends=[BiocGenerics ChemmineR DBI digest gespeR RcppAnnoy RCurl RUnit snow snowfall]; }; eisa = derive2 { name="eisa"; version="1.30.0"; sha256="11ydmv5kddq75sknbax1aiyxq60rx146qa7pd3m09axjzvk83mq5"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; }; - ensemblVEP = derive2 { name="ensemblVEP"; version="1.20.0"; sha256="1xza76fyqp8xikc98ipamsz6175nirdv7aisfvkb9nmzba4q0r62"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; + ensemblVEP = derive2 { name="ensemblVEP"; version="1.20.1"; sha256="0785hhfsgmnkangcq6lg48kdr5pifxs6j9v6apv80457k70d7ybv"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; ensembldb = derive2 { name="ensembldb"; version="2.2.2"; sha256="1yngndkf3588z91z0a2fvkg423p26ajm6xv1p27x0l9mzhhaqq3k"; depends=[AnnotationDbi AnnotationFilter AnnotationHub Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; }; epiNEM = derive2 { name="epiNEM"; version="1.2.0"; sha256="0d3r4m0q3w2ljf4bm03z1dpiiih9cshzpbi4nnqq3jwls82f7nlq"; depends=[BoolNet e1071 graph gtools igraph lattice latticeExtra minet nem pcalg RColorBrewer]; }; epigenomix = derive2 { name="epigenomix"; version="1.18.0"; sha256="0x567fxak38ngy5hs3x567381aigh1x1fb8ww8xvmpf2wlzrlfwp"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; }; @@ -943,8 +943,8 @@ in with self; { epivizrData = derive2 { name="epivizrData"; version="1.6.0"; sha256="101ibx9nq17dnn5j8kjy31pm8ly4nyzs1rrlbsvk0140avjhz154"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; }; epivizrServer = derive2 { name="epivizrServer"; version="1.6.0"; sha256="0qa13yvq9ywa3m1n2vmi60087cgg18rpnqbr1m7f137ivnxyb11b"; depends=[httpuv mime R6 rjson]; }; epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.6.0"; sha256="0rbd2kmdi0y97mx72gkg93s97slfig1k1bgcv5maknsqqqcwzz8j"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; }; - erccdashboard = derive2 { name="erccdashboard"; version="1.12.0"; sha256="07dc80l8618rlv3sywr0gp9i49kq66i9glx3md2r0k5c4l67mw37"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; }; - erma = derive2 { name="erma"; version="0.10.0"; sha256="0gcfs9g8vvdv5vmq9b21kd8sq5mizjj49nfzd4in9zvp4b9v7x1g"; depends=[AnnotationDbi Biobase BiocGenerics foreach GenomicFiles GenomicRanges ggplot2 Homo_sapiens rtracklayer S4Vectors shiny SummarizedExperiment]; }; + erccdashboard = derive2 { name="erccdashboard"; version="1.12.1"; sha256="19fg4n99w983wp6ffmzadzfp1bzmsn8papb5szbrxz102r2mq6df"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; }; + erma = derive2 { name="erma"; version="0.10.1"; sha256="1fi8nc6fbd7i4p9i9hli31xplmdpsxqcdrb8v3nf8fx9klllbdav"; depends=[AnnotationDbi Biobase BiocGenerics foreach GenomicFiles GenomicRanges ggplot2 Homo_sapiens rtracklayer S4Vectors shiny SummarizedExperiment]; }; esATAC = derive2 { name="esATAC"; version="1.0.23"; sha256="1g2pai0b98dfnng4h7w2xs73qp2dqacmx8x3ackqi6a515x0cyaf"; depends=[AnnotationDbi BiocGenerics BiocInstaller Biostrings BSgenome ChIPseeker clusterProfiler corrplot DiagrammeR digest GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2016 knitr magrittr R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; }; esetVis = derive2 { name="esetVis"; version="1.4.0"; sha256="1yb238lxy8sqmxim3zd25rp642cpz8p25vdffjlija2wivq8phn1"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; }; eudysbiome = derive2 { name="eudysbiome"; version="1.8.0"; sha256="13ayrigzy55h6an3am9f77r6mzcvyfcpxpby71xilhaf6mjhyj39"; depends=[Biostrings plyr R_utils Rsamtools]; }; @@ -992,14 +992,14 @@ in with self; { flowUtils = derive2 { name="flowUtils"; version="1.42.0"; sha256="0d4ab30xp722h9avi785wj8z1qz7dy65z5faqf3jc6j6v40bzikq"; depends=[Biobase corpcor flowCore graph RUnit XML]; }; flowVS = derive2 { name="flowVS"; version="1.10.0"; sha256="07vcqcxzd9cw4hvc1yld2v05zcxqs5p9spka2l80pmsjr0aij043"; depends=[flowCore flowStats flowViz]; }; flowViz = derive2 { name="flowViz"; version="1.42.0"; sha256="1fbr0snid9vgb133sb5dwkk469n465p8r490r67vsmm8wqsf6iyl"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; }; - flowWorkspace = derive2 { name="flowWorkspace"; version="3.26.6"; sha256="11r9c9h1ffp3i1p7gw0f93l5g30waawl7f2vbyh06p5mcr732dmp"; depends=[BH Biobase BiocGenerics cytolib data_table dplyr flowCore flowViz graph gridExtra lattice latticeExtra ncdfFlow RBGL RColorBrewer Rcpp Rgraphviz RProtoBufLib scales stringr XML]; }; + flowWorkspace = derive2 { name="flowWorkspace"; version="3.26.9"; sha256="04vs7knal0mrlj0rxpq5p3x1243ji0191zf0xmvk9689m94ib2za"; depends=[BH Biobase BiocGenerics cytolib data_table dplyr flowCore flowViz graph gridExtra lattice latticeExtra ncdfFlow RBGL RColorBrewer Rcpp Rgraphviz RProtoBufLib scales stringr XML]; }; flowcatchR = derive2 { name="flowcatchR"; version="1.12.0"; sha256="0i6r86b1g98kaw8nhbnjjrw8gw6vvhfpr5r7dn4whl4hwlizc5qx"; depends=[abind BiocParallel colorRamps EBImage rgl]; }; fmcsR = derive2 { name="fmcsR"; version="1.20.0"; sha256="0cbbil337zbb968zibkysrmpc8bwlpn7rl908zyvzvj8v11lxzcc"; depends=[BiocGenerics ChemmineR RUnit]; }; focalCall = derive2 { name="focalCall"; version="1.12.0"; sha256="07lb0ijdsryd31dxp5fgp393p9f21b7in3rnf9j43qn8wmz48hnl"; depends=[CGHcall]; }; frma = derive2 { name="frma"; version="1.30.1"; sha256="0319m8l7n2sfp4m6zipm7pkc57xikb735qk605m952m8ra08v8ml"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; }; frmaTools = derive2 { name="frmaTools"; version="1.30.0"; sha256="02z7igfcvhjg9f36snmmif8d7lsca9n9izg8zc543hcy7s704aa2"; depends=[affy Biobase DBI preprocessCore]; }; funtooNorm = derive2 { name="funtooNorm"; version="1.2.0"; sha256="09n7vq5f26px57sy35s29b8pmb9wcx6kii0h0i354sr3yg21ccpc"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; }; - gCMAP = derive2 { name="gCMAP"; version="1.22.0"; sha256="1ghaidxm8wpg9jx8s9ymlkciwkxjnlr5g5yfjappj7mf4qaqxvil"; depends=[annotate AnnotationDbi bigmemory bigmemoryExtras Biobase Category DESeq genefilter GSEABase GSEAlm limma Matrix]; }; + gCMAP = derive2 { name="gCMAP"; version="1.22.1"; sha256="0va9jixmp3v001gnym3clyjwarxs5d31vnyklzv31n5zffd7dm3l"; depends=[annotate AnnotationDbi bigmemory bigmemoryExtras Biobase Category DESeq genefilter GSEABase GSEAlm limma Matrix]; }; gCMAPWeb = derive2 { name="gCMAPWeb"; version="1.18.0"; sha256="152nd7vxz3cja8xmg5rq4j08lvd7cw1y09a737bfdq1zwrxc22v8"; depends=[annotate AnnotationDbi Biobase BiocGenerics brew gCMAP GSEABase hwriter Rook yaml]; }; gCrisprTools = derive2 { name="gCrisprTools"; version="1.6.0"; sha256="0x7bsnhs3qwimfkkxr8yslawdfy83x5ip8j2wlwq4m9hqwqk060g"; depends=[Biobase ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg]; }; gQTLBase = derive2 { name="gQTLBase"; version="1.10.0"; sha256="1756vfcj2dkkgcmfkkg7qdaig36dv9gfvpypn9rbrky56wm1p035"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; }; @@ -1024,7 +1024,7 @@ in with self; { geneRxCluster = derive2 { name="geneRxCluster"; version="1.14.0"; sha256="0r0lnhf19qw1d4p87632lz0rgx0d9q3cakpd6qh43b10fil7wjgp"; depends=[GenomicRanges IRanges]; }; geneXtendeR = derive2 { name="geneXtendeR"; version="1.4.0"; sha256="02a3aqn115l85cnvxy16ppri4hwir6mcp1av6s00nj66afxxnzmv"; depends=[AnnotationDbi data_table dplyr GO_db networkD3 org_Ag_eg_db org_Bt_eg_db org_Ce_eg_db org_Cf_eg_db org_Dm_eg_db org_Dr_eg_db org_Gg_eg_db org_Hs_eg_db org_Mm_eg_db org_Mmu_eg_db org_Pt_eg_db org_Rn_eg_db org_Sc_sgd_db org_Ss_eg_db org_Xl_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; }; genefilter = derive2 { name="genefilter"; version="1.60.0"; sha256="173swlg6gj4kdllbqvyiw5dggbcxiwlwpqmllsv4dxzn7h25i3g7"; depends=[annotate AnnotationDbi Biobase S4Vectors survival]; }; - genefu = derive2 { name="genefu"; version="2.10.0"; sha256="0pg9425z0inlbgvi15d050s6928xyqbxj36kk12z3dh3w2gwkycf"; depends=[AIMS amap biomaRt iC10 limma mclust survcomp]; }; + genefu = derive2 { name="genefu"; version="2.11.2"; sha256="1z70pnzgci0sjpr8vsvyg93zrjim7jh9jmba0p3pgqp3qw4gbi34"; depends=[AIMS amap biomaRt iC10 limma mclust survcomp]; }; geneplast = derive2 { name="geneplast"; version="1.4.0"; sha256="12ncf9rpnv1mwmdw4rbzzhggppcnzch764aiipy0jb21ix9xj61q"; depends=[ape snow]; }; geneplotter = derive2 { name="geneplotter"; version="1.56.0"; sha256="1z3g7frc1iviwrsv2dlm4nqvkc0685h4va0388yfxn102ln8wwma"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; }; genoCN = derive2 { name="genoCN"; version="1.30.0"; sha256="0m4sj2w0zra67d939knzriwda0nwphzspsmnl9jakl0kq8dvhjki"; depends=[]; }; @@ -1034,9 +1034,9 @@ in with self; { genoset = derive2 { name="genoset"; version="1.34.0"; sha256="1cw6g8r3n33xlqmbjsfn6kkdzz19kh71ag529sjbk9wlxi69rrz0"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; genotypeeval = derive2 { name="genotypeeval"; version="1.10.0"; sha256="1pff2n1s350j6i7klsnwqlizkdvvfpyqqrvc7kq5gj7yh508dxy9"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer Rtsne VariantAnnotation]; }; genphen = derive2 { name="genphen"; version="1.6.0"; sha256="0m1g1hfhhbq3xjdr2fjf3wbng6d953kci965h298c168dv3864k6"; depends=[Biostrings e1071 effsize ggplot2 randomForest rjags]; }; - gespeR = derive2 { name="gespeR"; version="1.10.0"; sha256="09xd080b08bfpqqbha4rxn4vmglv7c5asd4gibfjgjkasd78g40m"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; + gespeR = derive2 { name="gespeR"; version="1.10.1"; sha256="10aw6s5bn5jiw3qlqskcp2ngshgyykslsqlwrdpyahr4rh7z0zyl"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; ggbio = derive2 { name="ggbio"; version="1.26.1"; sha256="1xlmlngn27iwnr21s9di4059kav1a7c1sajx08wja8yn8f7j06hp"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - ggcyto = derive2 { name="ggcyto"; version="1.6.1"; sha256="07rsg673hnrn1kf82nb59sxa925hjlb3qnjwlxvzlr2lzs958rcd"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra ncdfFlow plyr RColorBrewer scales]; }; + ggcyto = derive2 { name="ggcyto"; version="1.6.2"; sha256="0qg9ivya9c2998hq40c0pvzfilb1q24h13fafymwa8p2lj59jyrg"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra ncdfFlow plyr RColorBrewer scales]; }; ggtree = derive2 { name="ggtree"; version="1.10.5"; sha256="1gkfjgihykkvqrhvzhr5brwzsgva0mxvfpa664k08jan9brjg22f"; depends=[ape ggplot2 magrittr rvcheck scales tidyr treeio]; }; girafe = derive2 { name="girafe"; version="1.30.0"; sha256="0k8fjn7d1hxwin0vywly7vc570048i7nckhyw9j4cind6fi6f75v"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; globalSeq = derive2 { name="globalSeq"; version="1.6.0"; sha256="19aws180r5gwxrz6xmfgic0mp8piki2qmzrxyy1f75866blk3r4f"; depends=[]; }; @@ -1100,7 +1100,7 @@ in with self; { keggorthology = derive2 { name="keggorthology"; version="2.30.0"; sha256="117s7b32nkv95adh2j91b87r90svhfb91ag28brsq3r333m2q8cn"; depends=[AnnotationDbi DBI graph hgu95av2_db]; }; kimod = derive2 { name="kimod"; version="1.6.0"; sha256="0mb9bv6bz7k27vs8rl26kh2zm8mvpkgzqhgc471lp4qz8f4fsbxc"; depends=[Biobase cluster]; }; lapmix = derive2 { name="lapmix"; version="1.44.0"; sha256="1b7daaqsq3bvb1wbhf99pk8kl4pm4kac7bnx211isr7ica34pxb5"; depends=[Biobase]; }; - ldblock = derive2 { name="ldblock"; version="1.8.0"; sha256="18nfsixh6d2wfrb9laqsgly5w1frzihhak683k0p8fdf51h4aqba"; depends=[erma GenomeInfoDb GenomicFiles GO_db Homo_sapiens Matrix Rsamtools snpStats VariantAnnotation]; }; + ldblock = derive2 { name="ldblock"; version="1.8.1"; sha256="1q8dz8wcq1r7kr635s9q21g36sxkdybk8khhpa4p57qv8r0gppl0"; depends=[erma GenomeInfoDb GenomicFiles GO_db Homo_sapiens Matrix Rsamtools snpStats VariantAnnotation]; }; les = derive2 { name="les"; version="1.28.0"; sha256="0xy7ggc2b20i1c78mww84xvc0jhbinxn00nbfvnbw997vjqr7r79"; depends=[boot fdrtool gplots RColorBrewer]; }; lfa = derive2 { name="lfa"; version="1.8.0"; sha256="06w0032wwqm2cxid7brb6iq6bkhqc5x3a08wwyjbib6lnj5n7rvh"; depends=[corpcor]; }; limma = derive2 { name="limma"; version="3.34.9"; sha256="1y2fm61g5i0fn0j3l31xvwh9zww9bpkc4nwzb1d0yv1cag20jkdc"; depends=[]; }; @@ -1121,7 +1121,7 @@ in with self; { maanova = derive2 { name="maanova"; version="1.48.0"; sha256="1vvjk6y8mp5h7l8yk4f1y48jx5k9fl9s12x2mgsbap306paw860q"; depends=[Biobase]; }; macat = derive2 { name="macat"; version="1.52.0"; sha256="168jw5bi1nbj2dfhipnvja7w0avmiw6vrvdany73d41fvigmagj5"; depends=[annotate Biobase]; }; made4 = derive2 { name="made4"; version="1.52.0"; sha256="1ns7f47l7ig2fm95l67ppym5gbkbr8lp18vx51pqwjg8r5rvj9sc"; depends=[ade4 gplots RColorBrewer scatterplot3d]; }; - maftools = derive2 { name="maftools"; version="1.4.25"; sha256="0k4ry5pnh3lxyzkab094wpjiaqjrymq9hbgpz8xv9g67fhg2g8ah"; depends=[Biostrings changepoint cometExactTest ComplexHeatmap cowplot data_table ggplot2 ggrepel gridExtra mclust NMF RColorBrewer rjson Rsamtools survival VariantAnnotation wordcloud]; }; + maftools = derive2 { name="maftools"; version="1.4.28"; sha256="17b3v1v9ipid8gqsq2gy0fpminc58f1mng9i2andswfr5ip38g7s"; depends=[Biostrings changepoint cometExactTest ComplexHeatmap cowplot data_table ggplot2 ggrepel gridExtra mclust NMF RColorBrewer rjson Rsamtools survival VariantAnnotation wordcloud]; }; maigesPack = derive2 { name="maigesPack"; version="1.42.0"; sha256="1c92kkr2rmfydckmbvri8g0lzz1v3hx93zpmb1pwrnlfpm01j95j"; depends=[convert graph limma marray]; }; makecdfenv = derive2 { name="makecdfenv"; version="1.54.0"; sha256="17fmzd12acdpq3vfnqrafmmg5jcmdgkf83mrqjpw92zah2w8490a"; depends=[affy affyio Biobase zlibbioc]; }; manta = derive2 { name="manta"; version="1.24.0"; sha256="060x5rdzkx882pa8x9w7j3sgj0clar6w35yblbcggq579r9jpx06"; depends=[caroline edgeR Hmisc]; }; @@ -1177,7 +1177,7 @@ in with self; { missMethyl = derive2 { name="missMethyl"; version="1.12.0"; sha256="1fvpny7x56l55zhgabm6al2i2n0hix7fp7d01bzirsn7chxpwny3"; depends=[AnnotationDbi BiasedUrn GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest limma methylumi minfi org_Hs_eg_db ruv statmod stringr]; }; mitoODE = derive2 { name="mitoODE"; version="1.16.0"; sha256="11kyihynbl3kcrngv8dhiqn3ghpkvv0xi35pf8np2p41zdhbrpyv"; depends=[KernSmooth MASS minpack_lm mitoODEdata]; }; mogsa = derive2 { name="mogsa"; version="1.12.2"; sha256="0a29q9jak4vr05ngh2pcsfifa9i6p086acjk2qrzwnc3lcfm00bm"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; }; - monocle = derive2 { name="monocle"; version="2.6.3"; sha256="1qag8q6wy1wf1zx16h2lwki6rn4nxkjff7yhpn8m30hp3v01fvhn"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree densityClust dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; }; + monocle = derive2 { name="monocle"; version="2.6.4"; sha256="1x4y02kn8spzz8y4hgmis9h2l494ys2j1vjs0axh32fp1rpc6d8c"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree densityClust dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; }; mosaics = derive2 { name="mosaics"; version="2.16.0"; sha256="08q48zakyfydrj8vix3a5w0j4ix5h1hpqccv0jxgj55gpdc062kj"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; }; motifRG = derive2 { name="motifRG"; version="1.22.0"; sha256="193zl2rlzwxv9p9q5i7rilj3w05ndqfyp9bdpvagp5s5cin4hf44"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 IRanges seqLogo XVector]; }; motifStack = derive2 { name="motifStack"; version="1.22.4"; sha256="13wrpdgyhzrqdp7k0d7iym2pjjla46rh3i1qwm34j22n7j0pxs8x"; depends=[ade4 Biostrings grImport htmlwidgets MotIV scales XML]; }; @@ -1202,7 +1202,7 @@ in with self; { mzID = derive2 { name="mzID"; version="1.16.0"; sha256="0yk70dka56zd8w62f03ggx3mandj91gfa767h9ajj0sd3mjmfqb9"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; }; mzR = derive2 { name="mzR"; version="2.12.0"; sha256="1x3gp30sfxz2v3k3swih9kff9b2rvk7hzhnlkp6ywlnn2wgb0q8c"; depends=[Biobase BiocGenerics ProtGenerics Rcpp zlibbioc]; }; ncdfFlow = derive2 { name="ncdfFlow"; version="2.24.0"; sha256="1rvqlfzdbqz7a035c2d0rfziail71pvyla6fi3mv1xzrm2vpw0b8"; depends=[BH Biobase BiocGenerics flowCore flowViz Rcpp RcppArmadillo Rhdf5lib zlibbioc]; }; - ndexr = derive2 { name="ndexr"; version="1.0.3"; sha256="05wnjya61w0mbskrfs9k5w04pr3hcf4c8w15y85z7j1vxjhpgwjq"; depends=[httr igraph jsonlite plyr tidyr]; }; + ndexr = derive2 { name="ndexr"; version="1.0.4"; sha256="1hr49a3svk65d585yix13ggd57zv5zzmavb81c452y2jpay0www0"; depends=[httr igraph jsonlite plyr tidyr]; }; nem = derive2 { name="nem"; version="2.52.0"; sha256="0114b8nzv07gii87rdcvia6n7jn203f5whx6x6x54ijxq8m1fkk8"; depends=[boot e1071 graph limma plotrix RBGL RColorBrewer Rgraphviz statmod]; }; netReg = derive2 { name="netReg"; version="1.2.0"; sha256="1cmh66m5zp1awrg79f8d09b48shq8hyjvkz6mfxrnvqbcj32v8ph"; depends=[Rcpp RcppArmadillo]; }; netbenchmark = derive2 { name="netbenchmark"; version="1.10.0"; sha256="173jmvslg8vj078psnvk6s4sns8n9zv2z8hkq6iq64pavmn9cf91"; depends=[c3net corpcor fdrtool GeneNet grndata Matrix minet PCIT pracma randomForest Rcpp]; }; @@ -1231,7 +1231,7 @@ in with self; { ontoCAT = derive2 { name="ontoCAT"; version="1.29.0"; sha256="057sbc0s08i22gjg886ngz0k59r4v29ssh11qj0wyv4n5g3zs0hg"; depends=[rJava]; }; ontoProc = derive2 { name="ontoProc"; version="1.0.0"; sha256="0la7lcynmdgavvzdz7b5g726pm4205r8194dnsmnhc5h3lryr36k"; depends=[AnnotationDbi Biobase ontologyIndex S4Vectors shiny]; }; openCyto = derive2 { name="openCyto"; version="1.16.1"; sha256="1qzx0qq1d2hi5whqi0kbg8xmjbglv6j2fli3wcx932g66lxwg3sv"; depends=[Biobase clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; - openPrimeR = derive2 { name="openPrimeR"; version="1.0.0"; sha256="0x4h7lcanzclcxnbrj2hii5mpv2b7rm5izm9p51drqylr69gvns2"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr uniqtag XML]; }; + openPrimeR = derive2 { name="openPrimeR"; version="1.0.4"; sha256="1gw4b7df390q40zy0bnv0wlwr9dwji99rhgy678k32nm8r2cdc19"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr uniqtag XML]; }; openPrimeRui = derive2 { name="openPrimeRui"; version="1.0.0"; sha256="1mchbalmq6mbxp9mdrmndz3pja7j1ffx5xglnzglfdqm2004gdlf"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; }; oposSOM = derive2 { name="oposSOM"; version="1.16.0"; sha256="1855wrszaxwc8rghhn1hgj6hrp5mxsyffbs9ccjckq5jl3z7z1mj"; depends=[ape arules Biobase biomaRt fastICA fdrtool igraph pixmap scatterplot3d som tsne]; }; oppar = derive2 { name="oppar"; version="1.6.0"; sha256="0h4wfgjq8xm5f6bcaj5vxy686ymr42r3ig9zw93ayycpfl81p275"; depends=[Biobase GSEABase GSVA]; }; @@ -1254,7 +1254,7 @@ in with self; { pcaGoPromoter = derive2 { name="pcaGoPromoter"; version="1.22.0"; sha256="0371ns6702nk5s3pj59z04i2sjf24sj0wm3m4rj67q4p5v7v1ksz"; depends=[AnnotationDbi Biostrings ellipse]; }; pcaMethods = derive2 { name="pcaMethods"; version="1.70.0"; sha256="0ii235g0x0492kh8cfrf28ni0b6vd6fh7kizkqmczzqggd6b1bk8"; depends=[Biobase BiocGenerics MASS Rcpp]; }; pcot2 = derive2 { name="pcot2"; version="1.46.0"; sha256="1pymhr9ypp5g27bbnayrz4ks8rg5j634bf4l596m2b6c4q9d9rc5"; depends=[amap Biobase]; }; - pcxn = derive2 { name="pcxn"; version="1.0.0"; sha256="105mzgy6bcwmk1nsnlr44bik8pazyjc7zcqn56732g1dj5na5v5w"; depends=[pcxnData pheatmap]; }; + pcxn = derive2 { name="pcxn"; version="2.0.0"; sha256="1iq3i3cj7zq7xyprgjv4v4whycm67lzcrsz9p08lxyzz7ci2y6xn"; depends=[pcxnData pheatmap]; }; pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.42.0"; sha256="0cs47qzkpphixcwn3fl9pfrw1qans8y51y8lb9phikh4s8cdq061"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; pdmclass = derive2 { name="pdmclass"; version="1.47.0"; sha256="1grc1fyn8yhwixi7638bsyb3zc6zhzzrbfh4hcpqk6gf653dls63"; depends=[Biobase fibroEset mda]; }; pepStat = derive2 { name="pepStat"; version="1.12.0"; sha256="0bnak90zfycd5a9qkz4lhwk4h61pr0pwn3hzaksxcv6c025h0mwm"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; }; @@ -1293,7 +1293,7 @@ in with self; { prot2D = derive2 { name="prot2D"; version="1.16.0"; sha256="1fp530fammi9xifx5g72jz8k7y3chjfg3mpybsbf5pzvva1429sj"; depends=[Biobase fdrtool impute limma MASS Mulcom qvalue samr st]; }; proteinProfiles = derive2 { name="proteinProfiles"; version="1.18.0"; sha256="069ksj5md9m7zylqwy6pyj3p9pa4j04vn4ss4d2r8n7a5z8f7d1g"; depends=[]; }; proteoQC = derive2 { name="proteoQC"; version="1.14.0"; sha256="1kv8ah7pbfl1gbb1pnjlmdw5bskfyh0hsn0nxraz0ybvwzn3kdsl"; depends=[dplyr ggplot2 MSnbase Nozzle_R1 plotly plyr reshape2 rmarkdown rpx rTANDEM seqinr tidyr VennDiagram XML]; }; - psichomics = derive2 { name="psichomics"; version="1.4.4"; sha256="1h8vg90nlvjmpz8ific6n41xqc3fzs1133hvbyrjzqbwqy0cgqzp"; depends=[AnnotationHub cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma miscTools pairsD3 plyr R_utils Rcpp shiny shinyBS shinyjs stringr survival XML xtable]; }; + psichomics = derive2 { name="psichomics"; version="1.4.5"; sha256="0lvkbjkdg5m1ni6rrnzzq2d2p5j0156vp2q9i3c8ji40fp7rx0vv"; depends=[AnnotationHub cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma miscTools pairsD3 plyr R_utils Rcpp shiny shinyBS shinyjs stringr survival XML xtable]; }; psygenet2r = derive2 { name="psygenet2r"; version="1.10.0"; sha256="0xf03vjyjiz4093cqnvi3dm532scx3f17mcf0av96h052vy10qb7"; depends=[BgeeDB Biobase BiocInstaller biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; }; puma = derive2 { name="puma"; version="3.20.0"; sha256="0pcwppa2zlzpfl5fafl4h5xcf0pnyvz3hkykl192hzp26wcjsc1i"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; pvac = derive2 { name="pvac"; version="1.26.0"; sha256="0lmwy5a74ikq0sl6zqw69kag6q3p092qwh1lzvv7rl2j9wm2yl46"; depends=[affy Biobase]; }; @@ -1382,7 +1382,7 @@ in with self; { seqbias = derive2 { name="seqbias"; version="1.26.0"; sha256="1i1zqslv0qws12x45c37h7fkgpz5wv3v87h72n4pw8gh80bgcafl"; depends=[Biostrings GenomicRanges Rsamtools zlibbioc]; }; seqcombo = derive2 { name="seqcombo"; version="1.0.0"; sha256="0bkap2c1061yg2ws2m1fafxi37pqzkg9mzim5sqiq8sgcfmk6na6"; depends=[Biostrings cowplot dplyr ggplot2 igraph magrittr rvcheck]; }; seqplots = derive2 { name="seqplots"; version="1.16.0"; sha256="1plwmdq2hjcqs94l7s03h9amcxdimwdrmi11z03xn10dfn1xig70"; depends=[Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 Rsamtools RSQLite rtracklayer S4Vectors shiny]; }; - sevenbridges = derive2 { name="sevenbridges"; version="1.8.0"; sha256="1jlw69yxh697q3bwd54mvzfiqskg469jyyh97sqnlizjmm5hiw11"; depends=[curl docopt dplyr httr jsonlite liftr miniUI objectProperties rstudioapi S4Vectors shiny stringr uuid yaml]; }; + sevenbridges = derive2 { name="sevenbridges"; version="1.8.1"; sha256="0v22pwyrgxh6mjqqcxz9ix7ripl5xds0l8p38w0w08ynbdns1w5b"; depends=[curl docopt dplyr httr jsonlite liftr miniUI objectProperties rstudioapi S4Vectors shiny stringr uuid yaml]; }; shinyMethyl = derive2 { name="shinyMethyl"; version="1.14.0"; sha256="17w7shgr4s5w3y1ik8zgr9brv7q87dx9l6dfqywsyvfmmkddimwa"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.16.0"; sha256="17x0bq1kzvmqqf30y0dmmp9777i62525mp4ysyv2m6vb9bgrbc4y"; depends=[mixtools rTANDEM shiny xtable]; }; sigPathway = derive2 { name="sigPathway"; version="1.46.0"; sha256="18nn7rpg67dz30v1drm0lnsb1wnww7maxdg4gk960wayasp8hk2z"; depends=[]; }; @@ -1406,7 +1406,7 @@ in with self; { specL = derive2 { name="specL"; version="1.12.0"; sha256="03bkh0z3pd6jl47wq2h6zd73fvaggwnaj2b4ibijwkg1643mfiip"; depends=[DBI protViz Rcpp RSQLite seqinr]; }; spikeLI = derive2 { name="spikeLI"; version="2.38.0"; sha256="00fixl9jpjfm0qgsg1lwi0315sa53j1j9fbrl69j8y2gbr8kgg28"; depends=[]; }; spkTools = derive2 { name="spkTools"; version="1.34.0"; sha256="0vpyv78c6c58qrcz91mir7jh9gx2j2l48bclabvgi0k2156wpwn7"; depends=[Biobase gtools RColorBrewer]; }; - splatter = derive2 { name="splatter"; version="1.2.1"; sha256="0iap91mmfan5p8wcpkxmqrrlk4zhgcigl08js5k1kcizmqkiar5g"; depends=[akima BiocGenerics BiocParallel checkmate edgeR fitdistrplus ggplot2 locfit matrixStats scales scater SingleCellExperiment SummarizedExperiment]; }; + splatter = derive2 { name="splatter"; version="1.2.2"; sha256="05bqmck2hszxlvj0vb1j7fbyv4fp2q7bjv7ywlg6hs9bx7zk1iaj"; depends=[akima BiocGenerics BiocParallel checkmate edgeR fitdistrplus ggplot2 locfit matrixStats scales scater SingleCellExperiment SummarizedExperiment]; }; spliceR = derive2 { name="spliceR"; version="1.20.0"; sha256="1skwj4cqf4s14df42jgy5b9fxrb5c5np9khc0wkg732qddbdlagd"; depends=[cummeRbund GenomicRanges IRanges plyr RColorBrewer rtracklayer VennDiagram]; }; spliceSites = derive2 { name="spliceSites"; version="1.26.0"; sha256="19av0wkdvy4x4p0nkhy9ca450d6j0s68m2lp26116ydh4lzv4p8x"; depends=[Biobase BiocGenerics Biostrings doBy IRanges rbamtools refGenome seqLogo]; }; splicegear = derive2 { name="splicegear"; version="1.50.0"; sha256="0i47l91p77s4acgrx9c8ll2va7amysw1g2acs36mn99hpz86v4m4"; depends=[annotate Biobase XML]; }; @@ -1423,7 +1423,7 @@ in with self; { stepNorm = derive2 { name="stepNorm"; version="1.50.0"; sha256="10fd623pqy944q9l913bv1a3dh7wk4i0r211hvvzdr39kfhjl6mf"; depends=[marray MASS]; }; subSeq = derive2 { name="subSeq"; version="1.8.0"; sha256="1z9qwfclhnnvcp4r4zfi201rmgd0hj47rd77x958m1d6d3z65m34"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; supraHex = derive2 { name="supraHex"; version="1.16.0"; sha256="10lhdhlb33p91np6ldmxc8yqgxwly7p37nlacm77q35dp05a453n"; depends=[ape hexbin MASS]; }; - survcomp = derive2 { name="survcomp"; version="1.28.4"; sha256="185k9srpfzvr51xfbgq1xy39x40cxgcvvq772y9gdk1702fxvyw0"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; + survcomp = derive2 { name="survcomp"; version="1.28.5"; sha256="09winy33410hw6srybaw49m2nb5cyp3fx0ww9gyhhkh73cvb6xwb"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; sva = derive2 { name="sva"; version="3.26.0"; sha256="0q5xb68wfcnchy8rkv5ma67pmz1i91lsnvmwmj8f1c3w4xan3pgw"; depends=[BiocParallel genefilter limma matrixStats mgcv]; }; swfdr = derive2 { name="swfdr"; version="1.4.0"; sha256="0ls0w09bkxxqv1y50d5c1s0qpxb1xdyall8ypvky8awi7v6jlrcg"; depends=[dplyr ggplot2 reshape2]; }; switchBox = derive2 { name="switchBox"; version="1.14.0"; sha256="0mhkf4wwd3v3s1148nafbd6x6ys8j933glh4gp3wj24ddmmpxvb2"; depends=[gplots pROC]; }; @@ -1468,7 +1468,7 @@ in with self; { vtpnet = derive2 { name="vtpnet"; version="0.18.0"; sha256="02nws97nmlrpzwb5jqm3fmg38mp1qdf41hzwmmprhfhsymnmc4ch"; depends=[doParallel foreach GenomicRanges graph gwascat]; }; vulcan = derive2 { name="vulcan"; version="1.0.0"; sha256="1yxm6yg7d65wh9rl6k5b6831y4hr5l9nnmfi0azxz1h4x1ghqbdj"; depends=[Biobase caTools ChIPpeakAnno csaw DESeq DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; }; wateRmelon = derive2 { name="wateRmelon"; version="1.22.1"; sha256="08imbxhs4ikm6panz3y64b24d2ghy1s2ksgd8siff53hg2v59rqr"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; }; - wavClusteR = derive2 { name="wavClusteR"; version="2.11.0"; sha256="0f1lk45a9yqr0ysjq8kjpqys8qln2b8ix03nywcqnkl1lk2b5ymi"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr wmtsa]; }; + wavClusteR = derive2 { name="wavClusteR"; version="2.12.1"; sha256="01b8aqwi7nd8l7mkiqgg9skvl0r6y1vwslwchyk95a9l4hkhxrz9"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr wmtsa]; }; waveTiling = derive2 { name="waveTiling"; version="1.20.0"; sha256="1dlz548vjnarz15mscmj56jp2hn810w0dy7xprxx22n51h7kb7jg"; depends=[affy Biobase Biostrings GenomeGraphs GenomicRanges IRanges oligo oligoClasses preprocessCore waveslim]; }; weaver = derive2 { name="weaver"; version="1.44.0"; sha256="06fg8z4gp2mabiy9jrfwkrrz1r4qzzgjk3lxj6d53ii2xhq95vy6"; depends=[codetools digest]; }; webbioc = derive2 { name="webbioc"; version="1.50.0"; sha256="1kg6apnhq97ypmpx6qm2f7wip81f910mjlg9kmd9zzmhnkrhqamd"; depends=[affy annaffy Biobase BiocInstaller gcrma multtest qvalue vsn]; }; diff --git a/pkgs/development/r-modules/cran-packages.nix b/pkgs/development/r-modules/cran-packages.nix index 8e8085fdece5..ee3dcdef20c9 100644 --- a/pkgs/development/r-modules/cran-packages.nix +++ b/pkgs/development/r-modules/cran-packages.nix @@ -4,7 +4,7 @@ # Rscript generate-r-packages.R cran >new && mv new cran-packages.nix { self, derive }: -let derive2 = derive { snapshot = "2018-03-12"; }; +let derive2 = derive { snapshot = "2018-04-20"; }; in with self; { A3 = derive2 { name="A3"; version="1.0.0"; sha256="017hq9pjsv1h9i7cqk5cfx27as54shlhdsdvr6jkhb8jfkpdb6cw"; depends=[pbapply xtable]; }; ABC_RAP = derive2 { name="ABC.RAP"; version="0.9.0"; sha256="1kdspln17v0krvahcd55vib4dv5azp60b3r1zf489x10qqbp1mxk"; depends=[]; }; @@ -29,6 +29,7 @@ in with self; { ADM3 = derive2 { name="ADM3"; version="1.3"; sha256="1hg9wjdhckilqd13dr4cim4j6jsh2sdwm18i3pfmfdj8cyswm3h0"; depends=[]; }; ADMM = derive2 { name="ADMM"; version="0.2.2"; sha256="0rwszi152nm6rrmgh23js2cv0yfrsa6vky4gmrgszxgx8sw221v9"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; ADMMnet = derive2 { name="ADMMnet"; version="0.1"; sha256="15f1zhgv7xai954qz2ahj4kpxyvr2svxpmybz7j43bhjpkq72dmq"; depends=[Matrix Rcpp RcppEigen]; }; + ADMMsigma = derive2 { name="ADMMsigma"; version="1.0"; sha256="141jzg7cvq1wlscrpb4hfkdshbm0vgzy4cas8vb6abh53j8h2g8q"; depends=[doParallel foreach ggplot2 Rcpp RcppArmadillo]; }; ADPF = derive2 { name="ADPF"; version="0.0.1"; sha256="1n7302xx77ngvp9i2h582i1mqslzllcdr0bn3pl2zk9jd8k97p7n"; depends=[]; }; ADPclust = derive2 { name="ADPclust"; version="0.7"; sha256="0s47cpsjykn7imsssa9w9b6g9d1sz2yah78yqzxmh0i3lqd757c1"; depends=[cluster dplyr fields knitr]; }; AEDForecasting = derive2 { name="AEDForecasting"; version="0.20.0"; sha256="16q2sn5zzvysyy3r32jnr21pbdkkn0k0sbarni6fdkx7pj27yijn"; depends=[changepoint forecast signal]; }; @@ -38,6 +39,7 @@ in with self; { AFM = derive2 { name="AFM"; version="1.2.2"; sha256="132zbxim3cbyxhv27l9i3jyhf5c47ckzsg4qndpwbyjhd0p9x7qh"; depends=[data_table dbscan fftwtools fractaldim ggplot2 gridExtra gstat igraph moments plyr png pracma rgl scales shiny shinyjs sp stringr]; }; AGD = derive2 { name="AGD"; version="0.35"; sha256="1dk8m3zqvapwhz0677d3b2cbrin14p9adn5annzgjrxgw7ms4mg0"; depends=[gamlss gamlss_dist]; }; AGSDest = derive2 { name="AGSDest"; version="2.3.1"; sha256="10jakc2qs5gnbp0g4k05isy0ii73ric50gmwkbb1khf9x0b5v6dg"; depends=[ldbounds]; }; + AGread = derive2 { name="AGread"; version="0.1.2"; sha256="17jj6g0df3cldaq4brn1abdivfg7w5bwycbrs70ynmy6iqib8piy"; depends=[data_table dplyr magrittr seewave]; }; AHMbook = derive2 { name="AHMbook"; version="0.1.4"; sha256="1cxyk420pzhh1scagxjmpm328xrcc1mpdrrch92yfgbgx09zkr4c"; depends=[coda plotrix RandomFields raster sp unmarked]; }; AHR = derive2 { name="AHR"; version="1.4.2"; sha256="15khncbbnpbvj6rcn6rklzhv5a0mmfyjljv77bsx96zfis7mk2d7"; depends=[etm MASS Rcpp RcppArmadillo survival]; }; AICcmodavg = derive2 { name="AICcmodavg"; version="2.1-1"; sha256="0y2lgvy0a78wdx4xcq85fkhl4hyvjdljrj199mibisfgkh61amb1"; depends=[lattice MASS Matrix nlme survival unmarked VGAM xtable]; }; @@ -56,32 +58,34 @@ in with self; { AMCP = derive2 { name="AMCP"; version="0.0.4"; sha256="051xvnr4zc25w00kh4gkffgigmhmcbqpwh9654jv37glr8ip2v3l"; depends=[]; }; AMCTestmakeR = derive2 { name="AMCTestmakeR"; version="0.1.0"; sha256="0wqz9akk5340k0z5791dh8zmh7bfrj7ln05xlw548dql47w0xnrk"; depends=[]; }; AMGET = derive2 { name="AMGET"; version="1.0"; sha256="18wdzzg5wr7akbd1iasa4mvmy44fb2n5gpghwcrx80knnicy3dxq"; depends=[]; }; - AMIAS = derive2 { name="AMIAS"; version="1.0.1"; sha256="17ay7dgi2c7ybps337ngyc1lg6fy84lxvkqfrr8nf5rjapw8mg6w"; depends=[limSolve Matrix zoo]; }; + AMIAS = derive2 { name="AMIAS"; version="1.0.2"; sha256="142bp8yaa87dpxkjrbcq57pr65x8q921hb5kxrcpghg157y5byn3"; depends=[limSolve Matrix zoo]; }; AMModels = derive2 { name="AMModels"; version="0.1.3"; sha256="1lhd15sh550z664qqxw6jpknnh628hm585d70ipx8s4mswi6g4hj"; depends=[unmarked]; }; AMOEBA = derive2 { name="AMOEBA"; version="1.1"; sha256="1npzh3rpfnxd4r1pj1hm214sfgbw4wmq4ws093lnl7pvsl0q37xn"; depends=[rlecuyer snowfall spdep]; }; AMORE = derive2 { name="AMORE"; version="0.2-15"; sha256="00zfqcsah2353mrhqkv8bbh24l8gaxk4y78icr9kxy4pqb2988yz"; depends=[]; }; - AMR = derive2 { name="AMR"; version="0.1.0"; sha256="1vp2l4xfd44sy14fqir2d7kq8835np6hnrzdhqkwxh5vjw8wkfyx"; depends=[dplyr reshape2 rvest xml2]; }; + AMR = derive2 { name="AMR"; version="0.1.1"; sha256="1kyy70g6nh37a1kfcc4p3d8yd61rhsk07rzh8hk0x5zyvc6gcs8l"; depends=[dplyr reshape2 rvest xml2]; }; ANLP = derive2 { name="ANLP"; version="1.3"; sha256="1m1jnfaqny6qprgyk4f3naan5i5cildawv322h6mc25nypwl12m4"; depends=[dplyr qdap RWeka tm]; }; ANN2 = derive2 { name="ANN2"; version="1.5"; sha256="17b0dv1dl4kni7yvrrwk65cadk6f7qk7505r27j9v530pffyv1k3"; depends=[Rcpp RcppArmadillo robustbase]; }; ANOM = derive2 { name="ANOM"; version="0.5"; sha256="14nfy9xplbabfprwxz5fvx26nmqhp657vr6d90dc8vk8ds63ckiz"; depends=[ggplot2 MCPAN multcomp nparcomp SimComp]; }; + ANOVA_TFNs = derive2 { name="ANOVA.TFNs"; version="1.0"; sha256="0dwspvxj2gzyvxsd9xyhv47n1hjlqa7z9qza4h3hn1xda12vkjly"; depends=[FuzzyNumbers]; }; ANOVAreplication = derive2 { name="ANOVAreplication"; version="1.1.3"; sha256="1cmps21lrmk6lh6gx0q9fz2736q7cibfcisvir6hnik3ablv70bn"; depends=[quadprog shiny]; }; APCanalysis = derive2 { name="APCanalysis"; version="1.0"; sha256="11snn5i8zyjpzf58ica762fpp14v7x5h8a8iwx4s4v81pgvlx862"; depends=[]; }; - APML0 = derive2 { name="APML0"; version="0.7"; sha256="1ivlyljyllkd53y3ckar7mrdykmd8fz3sg8i1xgfygrcnq79qz0i"; depends=[Matrix Rcpp RcppEigen]; }; + APML0 = derive2 { name="APML0"; version="0.8"; sha256="15qg0iapl2qh4llc8qazxc9qb4fi82snnw2agjgi29zcq7lzi2ww"; depends=[Matrix Rcpp RcppEigen]; }; APPEstimation = derive2 { name="APPEstimation"; version="0.1.1"; sha256="1bg9ma4i3k3xdgyk2h4f368gqnczvlhvjw4114iznmrv1wl4g25c"; depends=[densratio]; }; APSIM = derive2 { name="APSIM"; version="0.9.2"; sha256="0yyjz1kyvqpw9dh71ls2lf44gbb6r7bp9a22mr3z68k89azps5rc"; depends=[data_table lubridate plyr RSQLite sirad stringr]; }; APSIMBatch = derive2 { name="APSIMBatch"; version="0.1.0.2374"; sha256="0j44ijq1v1k60lka9nmw8m1jfjw7pidny9bvswqy5v82gzmwl29d"; depends=[]; }; - APfun = derive2 { name="APfun"; version="0.1.2"; sha256="0qw769ifcc7g9jq8ba2sxghcck52cspj3rpg8pkj2i185vg0lw77"; depends=[maptools raster rgdal sp yesno]; }; + APfun = derive2 { name="APfun"; version="0.1.3"; sha256="02p40n4l66r63wq8x7ygchfhxmnpaa7vgy4bjhkqx5gfi2v4psxd"; depends=[maptools raster rgdal sp yesno]; }; APtools = derive2 { name="APtools"; version="3.0"; sha256="0v5xgznc8hvw3gid8x5chksc62zpwbx34qsh64sv7d1kqmh5w26j"; depends=[survival]; }; AR = derive2 { name="AR"; version="1.0"; sha256="1h9rzlwnfm646s7423pcxz0zqykyadiw4sbxlygy2382la81x69x"; depends=[DISTRIB]; }; AR1seg = derive2 { name="AR1seg"; version="1.0"; sha256="0v9adx5wj9r4jwl3bqqmj0byiqfp585jz013qfqrq601wj8v4zi3"; depends=[Segmentor3IsBack]; }; ARCensReg = derive2 { name="ARCensReg"; version="2.1"; sha256="05zjk1wxqfigzg80lvx1940a059jfdr9zbzgzmz2n01glj1lvj63"; depends=[msm mvtnorm numDeriv tmvtnorm]; }; + ARHT = derive2 { name="ARHT"; version="0.1.0"; sha256="1fz81a202r8vk655dg6a03zfq3gfkimqjvmc95k3j02xz0iv58kn"; depends=[]; }; ARPobservation = derive2 { name="ARPobservation"; version="1.1"; sha256="1cdhn11jf1nf03jyvs17ygmjq9pb5rvmyyrq9fp7ifmvcgbkwsms"; depends=[]; }; ART = derive2 { name="ART"; version="1.0"; sha256="186w1ivj5v3h906crl953qxgai5wiznaih83dgvwgnmabs9p1wvk"; depends=[car]; }; ARTIVA = derive2 { name="ARTIVA"; version="1.2.3"; sha256="1jdvsslc8parz7wibcv51fx62brl2mc6i482hz43j1npsms2z1hl"; depends=[gplots igraph MASS]; }; - ARTP = derive2 { name="ARTP"; version="2.0.4"; sha256="1f6ay9lyaqsc33b0larb8v6imp5adaycya84wif2sg32rv4gx3yl"; depends=[]; }; + ARTP = derive2 { name="ARTP"; version="2.0.5"; sha256="0lwvhf5lamw28sd41vrhyin8ab92rl93j1ahk0aacwvnikgmfkpj"; depends=[]; }; ARTP2 = derive2 { name="ARTP2"; version="0.9.32"; sha256="12mrxssjcj08svdsrxv2nm53mzsgy1k0whd5zzy6fz327bjyqsrz"; depends=[data_table Formula]; }; ARTool = derive2 { name="ARTool"; version="0.10.4"; sha256="1malrjv4myk9nj3dndgpzscfhky4y6lj8xbfg8h2b29g7s2k846q"; depends=[car dplyr lme4 magrittr plyr]; }; - ASICS = derive2 { name="ASICS"; version="1.0.1"; sha256="0axjq2a99kl6qk05w5r9ddx3954m60739miarbwadlqwnsd5lkqk"; depends=[doParallel foreach ggplot2 plyr quadprog zoo]; }; + ASGS_foyer = derive2 { name="ASGS.foyer"; version="0.1.0"; sha256="017m7cji04gbcn396jz428llik15zgdvbr6bf1c8scds692paz3n"; depends=[sp]; }; ASIP = derive2 { name="ASIP"; version="0.3.2"; sha256="0zrn3hnn46zxmvchicyzy7zz2jnv8y1249a6sdi3w9rw2d8q025g"; depends=[gdalUtils raster rgdal]; }; ASMap = derive2 { name="ASMap"; version="1.0-2"; sha256="0fhivq5i2py79jkwfms0my77p9x8lrkn5vn1lwbsawfkyar4dvkq"; depends=[fields gtools lattice qtl RColorBrewer]; }; ASPBay = derive2 { name="ASPBay"; version="1.2"; sha256="0b1qpyvmj7z10ixrmdxp42bj9s72c1l9rihzmv9p58f12a5aznjz"; depends=[hexbin Rcpp RcppArmadillo]; }; @@ -107,7 +111,7 @@ in with self; { AcuityView = derive2 { name="AcuityView"; version="0.1"; sha256="0f0iclmnwdc8ixiiai4svk4x1g3pjy7dhm3cm58fv6ckx12d3d2l"; depends=[fftwtools imager plotrix]; }; AdMit = derive2 { name="AdMit"; version="2.1.3"; sha256="150zjxl56axhpgm25hzyhwwc5g77pkgi291d2v56zbjjqycfz2v8"; depends=[mvtnorm]; }; AdapEnetClass = derive2 { name="AdapEnetClass"; version="1.2"; sha256="01k3mj4g1ckbng7wkzzn9h0k9yf01cpnnkly0sjda574c5jhj0rc"; depends=[glmnet imputeYn lars quadprog]; }; - AdapSamp = derive2 { name="AdapSamp"; version="1.0"; sha256="1nww2c3kz1a62ivkvlcvhgx68wdk9ka8jhw1k8pilbgairxsbxgn"; depends=[pracma]; }; + AdapSamp = derive2 { name="AdapSamp"; version="1.1.1"; sha256="1jayjrsiib2ij4rxxj59g71r3xhzl5yqh0lhi8k6cfy03i7dkvis"; depends=[pracma]; }; AdaptFit = derive2 { name="AdaptFit"; version="0.2-2"; sha256="124lj1sq5cbp35z4ybkc7ci3fi6pgf8pc5k9mpqmyb6dj870q836"; depends=[cluster MASS nlme SemiPar]; }; AdaptFitOS = derive2 { name="AdaptFitOS"; version="0.65"; sha256="0f92dgfiglbklr4lv5kqxks8d04f675jlj2xjy9aqk4cgdj264xk"; depends=[MASS mgcv nlme SemiPar]; }; AdaptGauss = derive2 { name="AdaptGauss"; version="1.3.3"; sha256="0f6wk9ds8ayzi0fj1dz1m3755d1sjv4v5vc1hjhfxaim127kmbqh"; depends=[caTools ggplot2 shiny]; }; @@ -129,6 +133,7 @@ in with self; { Amelia = derive2 { name="Amelia"; version="1.7.4"; sha256="0w6532s5xr7pw47zqhhymql7i68c4lralvw1gc26l9d4c7ib00fd"; depends=[foreign Rcpp RcppArmadillo]; }; AmericanCallOpt = derive2 { name="AmericanCallOpt"; version="0.95"; sha256="1nhy44j5bmmjsp6g79nrn741rzzxikhdnxk4wwbdj9igcc1bs573"; depends=[]; }; AmesHousing = derive2 { name="AmesHousing"; version="0.0.3"; sha256="1fr01ka8x8gdnky6cbd2bjlh1lx71gzq440zsknn9kxvf01s6pxm"; depends=[dplyr magrittr]; }; + AmigaFFH = derive2 { name="AmigaFFH"; version="0.1.2"; sha256="0749j6m8pvdq4lm0n46bn052nxvplh3nvp2miz4hagw8q2p5fsyl"; depends=[adfExplorer ProTrackR tuneR]; }; AmmoniaConcentration = derive2 { name="AmmoniaConcentration"; version="0.1"; sha256="05pnwfji9l9az4jvni6jy7cayzg5pbspz82a63kmj6rgibn4ywvn"; depends=[]; }; AmostraBrasil = derive2 { name="AmostraBrasil"; version="1.2"; sha256="06y555gl9g89gygrv1rhg8j1bhb38m09mvvw67wvwhdl56j0fqbd"; depends=[foreign RCurl rgdal RJSONIO sp stringr]; }; AmpliconDuo = derive2 { name="AmpliconDuo"; version="1.1"; sha256="1vqpahavsksphxjyhd94dghg9ddskbfbs5vl5qcwl3jkjfvl7lwy"; depends=[ggplot2 xtable]; }; @@ -138,14 +143,14 @@ in with self; { AnalyzeFMRI = derive2 { name="AnalyzeFMRI"; version="1.1-16"; sha256="1mbjb682ns5230jd3vcvd6x4gnn9hpbmjd7r8120y4sp2g733b0f"; depends=[fastICA R_matlab]; }; AnalyzeTS = derive2 { name="AnalyzeTS"; version="2.2"; sha256="0ll4g8yzxhricz56vin8hhyplrmvjmkwfldya41vz6y6bwhywnmb"; depends=[MASS TSA tseries TTR urca]; }; AncestryMapper = derive2 { name="AncestryMapper"; version="2.0"; sha256="1fr2y1a5rn7rq8aly94f618kywix32jwysi70nfhaqx8hf4zzprb"; depends=[svd]; }; - AnglerCreelSurveySimulation = derive2 { name="AnglerCreelSurveySimulation"; version="1.0.0"; sha256="0vkb50v3by5z7qmaqpdb81zmbz23f315k09mpfy7qwsjfdgcpshv"; depends=[dplyr ggplot2]; }; + AnglerCreelSurveySimulation = derive2 { name="AnglerCreelSurveySimulation"; version="1.0.2"; sha256="1nhd0i30g5wb5jh96gfaa0lgnbnj0m2vy4gz7v2c3142396zalnx"; depends=[dplyr ggplot2]; }; AnnotLists = derive2 { name="AnnotLists"; version="1.2"; sha256="1g2khb2ggniwg2zcjamsm3bxyrl2zabvk540b5vyy9am9k83m1g9"; depends=[]; }; - AnnotationBustR = derive2 { name="AnnotationBustR"; version="1.1"; sha256="1pdwb4zmvirbn3aikd66djhzwga18w50krgn43mlw5dpa9c7fvhv"; depends=[ape seqinr]; }; + AnnotationBustR = derive2 { name="AnnotationBustR"; version="1.2"; sha256="1r52qry6xvn79b6qsbch35jhzg8y71kxqq9xm6gd302cv2xbwq7q"; depends=[ape seqinr]; }; AnnuityRIR = derive2 { name="AnnuityRIR"; version="1.0-0"; sha256="0yvfqzwhm5nhywfhzkxkfm07c0qi6z21j1cdaypz89qn567aj1d9"; depends=[actuar EnvStats fitdistrplus mc2d tseries]; }; AntAngioCOOL = derive2 { name="AntAngioCOOL"; version="1.2"; sha256="1krwms0y3xppc2y4m0az51wcbh4jq7mlr0jwinp66w8gh4k3qnp2"; depends=[caret rJava rpart RWeka]; }; AntWeb = derive2 { name="AntWeb"; version="0.7"; sha256="1ykfg3zzjdvjppr2l4f26lx00cn5vaqhhz1j1b5yh113ggyl40qw"; depends=[assertthat httr leafletR plyr rjson]; }; - AnthropMMD = derive2 { name="AnthropMMD"; version="2.3.3"; sha256="1q8pjxlrba7dna647pkzyj41scq8xghx5h7ac3jamhrkdppf5fdk"; depends=[MASS shiny]; }; - Anthropometry = derive2 { name="Anthropometry"; version="1.9"; sha256="1d1grh952kfpanz4vpvdbnx4yn42kkc6z78cc601l70azar2p7zg"; depends=[archetypes biclust cluster depth FNN ICGE nnls rgl shapes]; }; + AnthropMMD = derive2 { name="AnthropMMD"; version="2.5.0"; sha256="0pp9ihrkjwzp6zyglkp81ry4fzm1s26r687bhxswx5iz1brzmhdn"; depends=[scatterplot3d shiny smacof]; }; + Anthropometry = derive2 { name="Anthropometry"; version="1.10"; sha256="1rny65070yrdxnny8frp5ryp811h59924z5pfwg0cmd2szxnxnz7"; depends=[archetypes biclust cluster depth FNN ICGE nnls rgl shapes]; }; Aoptbdtvc = derive2 { name="Aoptbdtvc"; version="0.0.2"; sha256="1bygvf8vgzz3wa4485x2xxpk784zmw1nwsjjjysm12brrldh8zzh"; depends=[lpSolve MASS]; }; ApacheLogProcessor = derive2 { name="ApacheLogProcessor"; version="0.2.2"; sha256="01h8hi76nlwn9hnfyvzyg2d25s2r0vgpl5rz37yqkhjs5xr3rpyi"; depends=[doParallel foreach stringr]; }; AppliedPredictiveModeling = derive2 { name="AppliedPredictiveModeling"; version="1.1-6"; sha256="004d2k3mhl45inb7kx1ph8xc8h9bgm7f7l3prmvqrl5792400cn4"; depends=[CORElearn MASS plyr reshape2]; }; @@ -157,10 +162,11 @@ in with self; { ArchaeoPhases = derive2 { name="ArchaeoPhases"; version="1.3"; sha256="0012rjbk3bxf6j7p0skp02yrgqzl903dclnmm7c038f941krjcfq"; depends=[coda DT ggalt ggplot2 ggthemes hdrcde readr shiny shinythemes toOrdinal]; }; ArfimaMLM = derive2 { name="ArfimaMLM"; version="1.3"; sha256="0s5igf703zzvagsbdxf5yv4gn0vdq51b7fvbc8xkgvlmv91yy372"; depends=[fracdiff fractal lme4]; }; ArgumentCheck = derive2 { name="ArgumentCheck"; version="0.10.2"; sha256="0mgx7mzbg2wynixcf9hvs0i9p4zka7c3chrfvjmvvvwwgsy24hkc"; depends=[]; }; + Arothron = derive2 { name="Arothron"; version="1.0.0"; sha256="0fwxrjkqq8dkh38s3dcky0d6nggnmvfik0w3c4mzslzipnm84sin"; depends=[compositions doParallel foreach geometry Morpho rgl Rvcg stringr vegan]; }; ArrayBin = derive2 { name="ArrayBin"; version="0.2"; sha256="0jlhcv2d7pmqi32w71nz063ri1yj4i4isr3msnw7ckzvi9r42jwm"; depends=[SAGx]; }; AsioHeaders = derive2 { name="AsioHeaders"; version="1.11.0-1"; sha256="1g226im9aakqdv5gynsl568w0mxcbfrny9lqid7pl984pq8xr8ks"; depends=[]; }; AssayCorrector = derive2 { name="AssayCorrector"; version="2.0.0"; sha256="0d2444if5hyfbzyminnspw686r5l4pf9cdj9k48n2539vd61k452"; depends=[kSamples lattice latticeExtra RColorBrewer RVAideMemoire]; }; - AssetPricing = derive2 { name="AssetPricing"; version="1.0-0"; sha256="12v8hmmknkp472x406zgzwjp7x8sc90byc3s3dvmwd5qhryxkkix"; depends=[deSolve polynom]; }; + AssetPricing = derive2 { name="AssetPricing"; version="1.0-1"; sha256="0pbb1362dgdipbj3h50ykissl3gdqf1j1mpq53ixprvyc966c5h4"; depends=[deSolve polynom]; }; AssocAFC = derive2 { name="AssocAFC"; version="1.0.1"; sha256="0fxqsj2a9wi5py4sw3mzf27zx82nbj1q294vj1n0jh9ryc68wyh3"; depends=[CompQuadForm]; }; AssocTests = derive2 { name="AssocTests"; version="0.0-4"; sha256="1fhqzbj4aj4srkiba79w8wdyc7yy701izklxqqa7lsifnca6gn4j"; depends=[cluster combinat fExtremes mvtnorm]; }; AssotesteR = derive2 { name="AssotesteR"; version="0.1-10"; sha256="0aysilg79vprcyjirqz6c5s1ry1ia92xik3l38qrw1gf3vfli9cw"; depends=[mvtnorm]; }; @@ -180,17 +186,17 @@ in with self; { BACCT = derive2 { name="BACCT"; version="1.0"; sha256="0bpm4l27vbblzi2hhfbjw2af3ic2jbnyghkvchpq8ww43k8068iv"; depends=[ggplot2 reshape2 rjags]; }; BACprior = derive2 { name="BACprior"; version="2.0"; sha256="1z9dvjq4lr99yp6c99bcv6n5jiiwfddfz4izcpfnnyvagfgizr8p"; depends=[boot leaps mvtnorm]; }; BAEssd = derive2 { name="BAEssd"; version="1.0.1"; sha256="04wkhcj4wm93hvmfnnzryswaylnxz5qsgnqky9lsx4jqhvg340l6"; depends=[mvtnorm]; }; - BALCONY = derive2 { name="BALCONY"; version="0.1.8"; sha256="0bnhwz319dy1wc9g2sxb5w2hn8ypzxgaghrg4r82yjl5xig8qmd5"; depends=[Rpdb scales seqinr]; }; + BALCONY = derive2 { name="BALCONY"; version="0.2.0"; sha256="0ddg5fy82yxnmh54dilpljwfziqpc8rjladmcdnn5p98n9a6ypvl"; depends=[Biostrings dplyr readr Rpdb scales seqinr]; }; BAMBI = derive2 { name="BAMBI"; version="1.1.1"; sha256="1jzvsaf9cn28ny40vg0wlvdqz6f4i7n6iyym8s0aj58aiazwsmh5"; depends=[label_switching Rcpp RcppArmadillo]; }; BAMMtools = derive2 { name="BAMMtools"; version="2.1.6"; sha256="01mb40w3g0xy93pl9064ky8kd46sa7qlz6by1r6kchcfhajx8plv"; depends=[ape gplots Rcpp]; }; BANEScarparkinglite = derive2 { name="BANEScarparkinglite"; version="0.1.1"; sha256="1xs65drkpd1zmrvyrv0kndd5z5q4y425524w6mrh96qya9qjrmsx"; depends=[dplyr httr lubridate RCurl readr rvest XML xml2 zoo]; }; BANFF = derive2 { name="BANFF"; version="2.0"; sha256="1c5wdwqqvkcm9910lhd387snd7myv9qzs9vfk87vzp3di7hdi4l6"; depends=[coda doParallel DPpackage flexmix foreach GGally igraph mclust network pscl truncnorm]; }; BANOVA = derive2 { name="BANOVA"; version="1.1.1"; sha256="11cvf7wjip1vn5qn9hwxvdh98i8li9ijydfywf2ks2hls2430qbk"; depends=[coda rjags rstan runjags]; }; - BART = derive2 { name="BART"; version="1.5"; sha256="0vhyxyp0bbbkyymkwhll8jck3n4mybglshmfs9bycn4xmmm5rq8j"; depends=[Rcpp survival]; }; - BAS = derive2 { name="BAS"; version="1.4.7"; sha256="0rpgfzwc41clkdf20mh6wdd2fari84rfgfgzxw04lb3b3s7hz8y4"; depends=[]; }; + BART = derive2 { name="BART"; version="1.6"; sha256="06a6bxrxspgjij8mgi1gzq7fbak9zqppprl55jbb91nkf13svbzq"; depends=[Rcpp survival]; }; + BAS = derive2 { name="BAS"; version="1.4.9"; sha256="0c0mj7ijgghbjmyrwr6qp2a3iidsxli3a0wb4njjaj5n7b7yggby"; depends=[]; }; BASIX = derive2 { name="BASIX"; version="1.1"; sha256="18dkvv1iwskfnlpl6xridcgqpalbbpm2616mvc3hfrc0b26v01id"; depends=[]; }; BASS = derive2 { name="BASS"; version="0.2.2"; sha256="1q3sihp2iv1ikggzgd2k3vh2myz8bz31rzlaavw0n84d0h1zjxy2"; depends=[]; }; - BASiNET = derive2 { name="BASiNET"; version="0.0.2"; sha256="1qik3r52hygxldw3sw0sln7yw7z0bmybavf0kf9fmpkyir0z0xvn"; depends=[Biostrings igraph randomForest rgl rmcfs RWeka]; }; + BASiNET = derive2 { name="BASiNET"; version="0.0.3"; sha256="0kcmc4jpiwmdydbyjfm1jx4ravxkqzvqca3p5gp26nx14xglm9hi"; depends=[Biostrings igraph randomForest rJava rmcfs RWeka]; }; BAT = derive2 { name="BAT"; version="1.5.6"; sha256="0m6yfxymhzi8n2l421ngy6cz3qa5v7yrd1jhpi8ymlnf8dysd57x"; depends=[nls2 raster spatstat vegan]; }; BAYESDEF = derive2 { name="BAYESDEF"; version="0.1.0"; sha256="030xskgqqg0n85mphjv32ks4ysvxb36f6ayy0176gps14jhmhcp7"; depends=[glmnet gWidgets readxl REdaS]; }; BAYSTAR = derive2 { name="BAYSTAR"; version="0.2-9"; sha256="0crillww1f1jvhjw639sf09lpc3wpzd69milah143gk9zlrkhmz2"; depends=[coda mvtnorm]; }; @@ -214,13 +220,13 @@ in with self; { BCgee = derive2 { name="BCgee"; version="0.1"; sha256="0ad0dj2ymgvkmcmq3jlpmn0pgigdql0xgvcwsbpdydv33a6snr04"; depends=[]; }; BClustLonG = derive2 { name="BClustLonG"; version="0.1.2"; sha256="0w35pwv3y00pmi4qjnzii3q44k7lk13x0cmh1zq3cl42gpi31p7f"; depends=[lme4 MASS mcclust Rcpp RcppArmadillo]; }; BDWreg = derive2 { name="BDWreg"; version="1.2.0"; sha256="07j6dy69q1as1nwgp2790wzpzmjich2256cddhl7n3h2rs1dja74"; depends=[coda doParallel DWreg foreach MASS]; }; - BDgraph = derive2 { name="BDgraph"; version="2.44"; sha256="055pmjf8pgfqih6bxjj34gz7gj78y4z3kldy561z7mi443kwphq6"; depends=[igraph Matrix]; }; + BDgraph = derive2 { name="BDgraph"; version="2.46"; sha256="1y3rcl0x1cvcsfp4p1v82v0i119izwa8hkvs5qang70slv973bbv"; depends=[igraph Matrix]; }; BEACH = derive2 { name="BEACH"; version="1.2.1"; sha256="0a6xwczw3d2jnksb5lpf7j859pnyfxcab4kfv4v7lmf9iasbyyf5"; depends=[devtools DT haven plyr readxl rJava rtf sas7bdat shiny WriteXLS xtable]; }; BEDASSLE = derive2 { name="BEDASSLE"; version="1.5"; sha256="1bz3lr0waly9vj9adwhmgs3lq7zjdkcbvm3y9rnn72qlrwmv5fbn"; depends=[emdbook MASS matrixcalc]; }; BEDMatrix = derive2 { name="BEDMatrix"; version="1.4.0"; sha256="0aha33skksh45fx248lx6v8cxwgkiripw3avspb8arbld9rmqwxn"; depends=[BH crochet Rcpp]; }; BEQI2 = derive2 { name="BEQI2"; version="2.0-0"; sha256="19q29kkwww5hziffkm2yx7n4cpfcsyh0z4mljdcnjkwfp732sjig"; depends=[jsonlite knitr markdown plyr reshape2 xtable]; }; - BEST = derive2 { name="BEST"; version="0.5.0"; sha256="178vn0ps6nr7qjayavnvmbyx6gq57dni5llsncl89kkz633mb2hg"; depends=[coda HDInterval rjags]; }; - BETS = derive2 { name="BETS"; version="0.3.3"; sha256="09xgf356casig06q7jys5h55y8kj0ndnr7mkymgzcvni7djc5gq3"; depends=[DBI DT dygraphs forecast foreign ggplot2 grnn htmltools httr lubridate miniUI plotly rjson rmarkdown RMySQL rstudioapi rvest seasonal shiny stringr urca webshot xml2 zoo]; }; + BEST = derive2 { name="BEST"; version="0.5.1"; sha256="0yx3bkaaly0lriyd5xr7aay4c381a5iwanfixz9v37cmvs64rs4s"; depends=[coda HDInterval rjags]; }; + BETS = derive2 { name="BETS"; version="0.3.6"; sha256="0m32ad2ysb5dr4125fccrbi5cndal3qml0lflnp9kdbm6wwhqv85"; depends=[DBI DT dygraphs forecast foreign ggplot2 grnn htmltools httr lubridate miniUI plotly rjson rmarkdown RMySQL rstudioapi rvest seasonal shiny stringr urca webshot xml2 zoo]; }; BGData = derive2 { name="BGData"; version="1.0.0"; sha256="0xd7xpnvhpyvv6caxyif7wa25llvrnyzmmk4z6rp7absjqbz2alc"; depends=[BEDMatrix bigmemory bit ff LinkedMatrix symDMatrix]; }; BGGE = derive2 { name="BGGE"; version="0.6.1"; sha256="1ndn4cj9mrkx2mrlh2dgyy3lpx526fmg91zqgvdcbvn99r5sl17j"; depends=[]; }; BGLR = derive2 { name="BGLR"; version="1.0.5"; sha256="14a979rnasaklkfafzpkhr6mqv0ga7fsfxq63scpnlwa2aasgn83"; depends=[]; }; @@ -230,7 +236,7 @@ in with self; { BHH2 = derive2 { name="BHH2"; version="2016.05.31"; sha256="1m4fcx979nbm97hi89vbjjix0sx6qhdzs486risck9bi7yzih5k4"; depends=[]; }; BHMSMAfMRI = derive2 { name="BHMSMAfMRI"; version="1.1"; sha256="1qygizn2np9amkm1f1332zp9ab9ky423plr9lahgwzdxn1c2c5c2"; depends=[AnalyzeFMRI fmri wavethresh]; }; BIEN = derive2 { name="BIEN"; version="1.2.2"; sha256="11bqbkw6v4yvlvpv0bhmn5q7ady12hmp9ziak5jzsc7p4d8azd5r"; depends=[ape DBI rgdal rgeos RPostgreSQL sp]; }; - BIFIEsurvey = derive2 { name="BIFIEsurvey"; version="2.3-18"; sha256="0cf5nbqcfvx76v1iia2d48j6dg9sqscmjrl0r835xbssiv9xk5w4"; depends=[miceadds mitools Rcpp RcppArmadillo survey TAM]; }; + BIFIEsurvey = derive2 { name="BIFIEsurvey"; version="2.4-9"; sha256="0v9q2gxb7i9zgkkf8ka85r3l3ypg21fzl48paliqi5ac144l177q"; depends=[miceadds mitools Rcpp RcppArmadillo survey TAM]; }; BIGDAWG = derive2 { name="BIGDAWG"; version="2.1"; sha256="0zvy5sl94qi20gdrnxb2lmadfy7p0wqfngjsf6jc2cgwyzk4gnrj"; depends=[haplo_stats httr knitr rmarkdown XML]; }; BIGL = derive2 { name="BIGL"; version="1.1.1"; sha256="008f3x0hkmifra1wcv56hxjjf2rqc9qxsbpi23aq4pgk7mxdaax7"; depends=[ggplot2 MASS minpack_lm numDeriv progress rgl robustbase scales]; }; BINCOR = derive2 { name="BINCOR"; version="0.1.0"; sha256="0fzynq85zbjybylxrpk89sq4l1ccm8k4z1bn25b6rgnz5m18r8hs"; depends=[pracma]; }; @@ -238,14 +244,14 @@ in with self; { BIOMASS = derive2 { name="BIOMASS"; version="1.2"; sha256="1d9rwgh0ws27yd0p2la7pn49sb71lh9bg4f42fpx448ah8dimw17"; depends=[httr jsonlite minpack_lm msm raster]; }; BIOdry = derive2 { name="BIOdry"; version="0.5"; sha256="0isvqs2bgirxwb7b1dbn70zfx9b4mw7fp33fwmxq0dx6k1r4f87g"; depends=[ecodist nlme]; }; BIPOD = derive2 { name="BIPOD"; version="0.2.1"; sha256="04r58gzk3hldbn115j9ik4bclzz5xb2i3x6b90m2w9sq7ymn3zg1"; depends=[Rcpp RcppArmadillo]; }; - BIS = derive2 { name="BIS"; version="0.1.0"; sha256="0m9wvz4vg9vpw6dxjdxzi3vbkflvs4041xjrpic5jngw0jv8fjz0"; depends=[dplyr readr rvest tidyr xml2]; }; - BKPC = derive2 { name="BKPC"; version="1.0"; sha256="1c5n2vdpsk00slqyxxq2c8d7ix8jdbyigrh23ykd4b95mynp9kdv"; depends=[kernlab]; }; + BIS = derive2 { name="BIS"; version="0.2.0"; sha256="15wybfj03rzrxxdm19mm7b7c2l71lzs50n7vw8vnyx1n5w1k97jv"; depends=[dplyr readr rvest tidyr xml2]; }; + BKPC = derive2 { name="BKPC"; version="1.0.1"; sha256="17gmhf6qq8jn2xzkqvjq60xzy0slz6kgfpd0d6hlpnf30ww7q923"; depends=[kernlab]; }; BLCOP = derive2 { name="BLCOP"; version="0.3.1"; sha256="1qfkljw5b1k4b5jd08hw6dsmvgr7vg3kjyib5s13q0mkxvclasym"; depends=[fBasics fMultivar fPortfolio MASS quadprog RUnit timeSeries]; }; BLModel = derive2 { name="BLModel"; version="1.0.2"; sha256="0l5f2v5ggadmrci3qhhmxm3j9i6jii0anq5rv5vk50y2qzii2q15"; depends=[]; }; BLPestimatoR = derive2 { name="BLPestimatoR"; version="0.1.5"; sha256="0wnxfyl8hz1a0k33v5nc3j1ziwcv1fnw8639l0xv92p5rn7n5nc5"; depends=[mvQuad numDeriv randtoolbox Rcpp ucminf]; }; BLR = derive2 { name="BLR"; version="1.4"; sha256="0wy3c8nnzkdhwb5s1ygdid47hpdx72ryim36mnicrydy0msjivja"; depends=[SuppDists]; }; BLRPM = derive2 { name="BLRPM"; version="1.0"; sha256="15q0jkw4swz35c58nv23k8g1dy1kkbqh5aydjck7pd0fmppqrhpx"; depends=[R6]; }; - BMA = derive2 { name="BMA"; version="3.18.7"; sha256="095iwlbjklg1pkp5jiw0srg7jh9cn50g8z4namrs4xsmlh7if65z"; depends=[inline leaps robustbase rrcov survival]; }; + BMA = derive2 { name="BMA"; version="3.18.8"; sha256="1a32ghn17ymb3zdh9xv6zvqcxc81m4y478mk6z9bfndq7ihy1ih5"; depends=[inline leaps robustbase rrcov survival]; }; BMAmevt = derive2 { name="BMAmevt"; version="1.0.1"; sha256="1krx8isj2wp3panjcbc2ysrc2pxz2casj12qq9p18imaa326l53y"; depends=[coda]; }; BMRBr = derive2 { name="BMRBr"; version="0.1.0"; sha256="1z54annplzydnxvwd0rkhcw5rmfx8r99k28ld5rgh22xq3zdq825"; depends=[rvest xml2]; }; BMRV = derive2 { name="BMRV"; version="1.32"; sha256="1j1cwjk3l7f06nqdwrqdyhzm43bb8hj5wgdd14zc1grxyfc9ya95"; depends=[BH]; }; @@ -263,12 +269,13 @@ in with self; { BNSL = derive2 { name="BNSL"; version="0.1.3"; sha256="1918dc73gasac45kzcf4pxvl8iaawzkqdi03ny0napbjr3z8rss2"; depends=[bnlearn igraph Rcpp]; }; BNSP = derive2 { name="BNSP"; version="2.0.2"; sha256="0vapcf8qxcdmragbmwai4yddpmwwm79mksf4zcych0d4a0ij39h6"; depends=[coda ggplot2 gridExtra plot3D threejs]; }; BOG = derive2 { name="BOG"; version="2.0"; sha256="0lz5af813b67hfl4hzcydn58sjhgn5706n2h44g488bks928k940"; depends=[DIME hash]; }; - BOIN = derive2 { name="BOIN"; version="2.6"; sha256="0vg7rfypkqy8l0q9zyqhbciangv744rvylv9741rk87mdiwgjr8k"; depends=[Iso]; }; - BPEC = derive2 { name="BPEC"; version="1.1"; sha256="14bkpmi1rmpl728nb7kmbmd687s5cvlzj181cxzwcaz3yb8x58nw"; depends=[ape coda fields ggmap ggplot2 igraph maptools mvtnorm OpenStreetMap phytools R2G2 sp]; }; + BOIN = derive2 { name="BOIN"; version="2.6.3"; sha256="0hvx75zjb5bj005ggj9j67p9f8hpq8p6c0ihidf3avfrirl8g98p"; depends=[Iso]; }; + BPEC = derive2 { name="BPEC"; version="1.2.1"; sha256="142x0iw3sanvqm0n2hfba8pwndfk8l5qzhgpca9gcya7wkcmmmf7"; depends=[ape coda fields ggmap ggplot2 igraph maptools mvtnorm OpenStreetMap phytools R2G2 sp]; }; BRugs = derive2 { name="BRugs"; version="0.9-0"; sha256="0f0v30mvfw97vfwzkjpqzf2894b2yhksja0xhpranprk135srxp0"; depends=[coda]; }; BSDA = derive2 { name="BSDA"; version="1.2.0"; sha256="0gs33yyca45jd4f5k5f7qid4ayw2rnl2wl7a6m7vf39dfx7ympm2"; depends=[e1071 lattice]; }; BSGS = derive2 { name="BSGS"; version="2.0"; sha256="08m8g4zbsp55msqbic4f17lcry07mdn0f5a61zdcy2msn2ihzzf9"; depends=[batchmeans MASS plyr pscl]; }; BSGW = derive2 { name="BSGW"; version="0.9.2"; sha256="1q6qvm9yxh35wywrzs3kr31jsa0bmbwrqh0r3qjc0dzi6q8n6pjy"; depends=[doParallel foreach MfUSampler survival]; }; + BSL = derive2 { name="BSL"; version="0.1.1"; sha256="0g8nqsnhrghan2kx5iciv01drzn8kbx5klmrvcjz0ajfqjdm8kg4"; depends=[coda cvTools foreach ggplot2 glasso gridExtra MASS Rcpp RcppArmadillo]; }; BSPADATA = derive2 { name="BSPADATA"; version="1.0"; sha256="1g709i0icxlxq2ljb2sm5iyc8ljqxadi62xc4mg702fsgl0x5ny9"; depends=[mvtnorm pscl spdep]; }; BSSasymp = derive2 { name="BSSasymp"; version="1.2-1"; sha256="0w141yxqpck59n85rjc6d3qy6bwhk1z80zsm21hda0bgfwy9v6wy"; depends=[fICA JADE]; }; BSagri = derive2 { name="BSagri"; version="0.1-8"; sha256="148pr4lkgdi4bwc9lavgj356nh240iazz28xklq14rw4gzhmz2k4"; depends=[boot gamlss MCPAN mratios multcomp mvtnorm]; }; @@ -280,7 +287,7 @@ in with self; { BTYDplus = derive2 { name="BTYDplus"; version="1.0.1"; sha256="0x8as4zskpbsvhh8gnvzgp833dkv01cs5fqfva9qri296343kppv"; depends=[bayesm BTYD coda data_table mvtnorm Rcpp]; }; BUCSS = derive2 { name="BUCSS"; version="0.0.2"; sha256="188d9f0gdhym28xvvk5z10amdbg50w6ab4ik2r9qfc3p1v7k10q9"; depends=[]; }; BVS = derive2 { name="BVS"; version="4.12.1"; sha256="111g61bpwh80v6gy44q087swcrnnnzdcibm22pzzi9jsfphy6l0c"; depends=[haplo_stats MASS msm]; }; - BVSNLP = derive2 { name="BVSNLP"; version="0.9.10"; sha256="06q7pdv0jc7q9m5ahyxj5dqv8bjc2zva3gjy8ys139mmv7i37pjv"; depends=[doParallel foreach Rcpp RcppArmadillo RcppEigen RcppNumerical]; }; + BVSNLP = derive2 { name="BVSNLP"; version="1.1.0"; sha256="09vffm27jwpfmil6dn7jbsrh9ys3199l0qpfqrjcvz21nsgd43hg"; depends=[doParallel foreach Rcpp RcppArmadillo RcppEigen RcppNumerical]; }; BWStest = derive2 { name="BWStest"; version="0.2.1"; sha256="1kwd1s1dd21qca31np49aql839j8325y8bnxlcq84nw48vqv0jgc"; depends=[memoise Rcpp]; }; BaBooN = derive2 { name="BaBooN"; version="0.2-0"; sha256="145q2kabjks2ql3m48sfjis5y35l8rcqnr5s176viv9yhfafn351"; depends=[coda Hmisc MASS nnet Rcpp RcppArmadillo]; }; BaM = derive2 { name="BaM"; version="1.0.1"; sha256="0y8m6mhghlrp379swj9cfrzqcdr3a7y29mx4d6zld4is00wdw16b"; depends=[coda dlm MASS mice nnet]; }; @@ -311,10 +318,11 @@ in with self; { BayesCombo = derive2 { name="BayesCombo"; version="1.0"; sha256="01rzjja0xzvqyjivl8a9da13v13ylm4dwv4f27cmgz2znakfg5y8"; depends=[]; }; BayesComm = derive2 { name="BayesComm"; version="0.1-2"; sha256="1rrbvwcfm93cw0m33g0zn6nyshfjc97kb3fby9cga0zaixc0a8rk"; depends=[abind coda mvtnorm Rcpp RcppArmadillo]; }; BayesDA = derive2 { name="BayesDA"; version="2012.04-1"; sha256="0fp27cmhw8dsxr4mc1flm6qh907476kph8ch2889g9p31xm1psjc"; depends=[]; }; + BayesESS = derive2 { name="BayesESS"; version="0.1.12"; sha256="18dhswny8idj2wqpa66amz1yqk8yhk1vwazj4p70pk8jnpg8cdfy"; depends=[dfcrm LaplacesDemon MASS MatrixModels MCMCpack Rcpp RcppArmadillo RcppEigen]; }; BayesFM = derive2 { name="BayesFM"; version="0.1.2"; sha256="0fiw2x29cpv3prywsbvs1m8a588s2wpi3bwzzjisi2rafbl619xd"; depends=[checkmate coda ggplot2 gridExtra plyr]; }; BayesFactor = derive2 { name="BayesFactor"; version="0.9.12-2"; sha256="17zfs8bmzp59zaxzcrzis2sxdnqxrv9h1kpb22112mp9l1alvwl4"; depends=[coda gtools Matrix MatrixModels mvtnorm pbapply Rcpp RcppEigen stringr]; }; BayesGESM = derive2 { name="BayesGESM"; version="1.4"; sha256="0qw2byb48f67461m1k8a1rqh6a0c3zq1rc4ni9xzxv8dih4wkq0f"; depends=[Formula GIGrvg normalp]; }; - BayesGOF = derive2 { name="BayesGOF"; version="2.1"; sha256="13frvpb3jl8vq1h545k2pbqdj7547k9zipxxiggryvk65l2p4v30"; depends=[orthopolynom VGAM]; }; + BayesGOF = derive2 { name="BayesGOF"; version="3.0"; sha256="15699lms3g9j9fwc6lng0bg1yngz18pvmvxwaqg8258qjwc79xlx"; depends=[Bolstad2 nleqslv orthopolynom VGAM]; }; BayesH = derive2 { name="BayesH"; version="1.0"; sha256="0mjd1i3rkhyq3qcalq0ing0ap0igbhyvczaihl4pcfidgs70bci3"; depends=[]; }; BayesLCA = derive2 { name="BayesLCA"; version="1.7"; sha256="0lsqgjqal9092v1wr07p8g5cqm24k2d80sp7hlr7r1xknakmm1b6"; depends=[coda e1071 fields MCMCpack nlme]; }; BayesMAMS = derive2 { name="BayesMAMS"; version="0.1"; sha256="1qq3j9nm0k58gpyfavz77v1dwghy8pmpk0v52cj7l8sb3a3aiinm"; depends=[mvtnorm]; }; @@ -324,7 +332,7 @@ in with self; { BayesNetBP = derive2 { name="BayesNetBP"; version="1.3.0"; sha256="01blqc48ssgr3dg5bk7yzwpa59n3ja1dggglwm2441dwjxf10vxx"; depends=[bnlearn doBy fields graph gRbase igraph qtl qtlnet RColorBrewer Rgraphviz]; }; BayesPieceHazSelect = derive2 { name="BayesPieceHazSelect"; version="1.1.0"; sha256="0znbmv7crqycdx75jh02h6z8d6cifjszbrldv2yva4mkjxsydag5"; depends=[mvtnorm]; }; BayesPiecewiseICAR = derive2 { name="BayesPiecewiseICAR"; version="0.2.1"; sha256="1qrmw7zmygdzz84p76hyh2d8dx88b8xhbbd7radqm39g35zq5wz6"; depends=[mvtnorm]; }; - BayesRS = derive2 { name="BayesRS"; version="0.1.2"; sha256="11xpkq8x4xcpr4kmflr5blq0pn0ssfi9204bs5xfihn7q3d9bzwy"; depends=[coda ggplot2 metRology reshape rjags]; }; + BayesRS = derive2 { name="BayesRS"; version="0.1.3"; sha256="0fhvnckabp0z1cdsbjgv3ijnzaxwhrk83fwcflgqbhvm3a9lzr77"; depends=[coda ggplot2 metRology reshape rjags]; }; BayesS5 = derive2 { name="BayesS5"; version="1.30"; sha256="1nx61sq1d20238hbgr9p9hrmnxsxpsjhnb4sdhmqg1m7klq8qyrw"; depends=[abind Matrix snowfall]; }; BayesSAE = derive2 { name="BayesSAE"; version="1.0-1"; sha256="09s7f472by689b2b0gahnkhyjriizpsx6r5qa95nf3f4bfqi2cpf"; depends=[coda Formula lattice]; }; BayesSingleSub = derive2 { name="BayesSingleSub"; version="0.6.2"; sha256="0hgmyhg4mpxx7k91hbfa9h3533mqyn9rz4kl9kb30cc9g7g0m045"; depends=[coda MCMCpack mvtnorm]; }; @@ -356,7 +364,7 @@ in with self; { BeviMed = derive2 { name="BeviMed"; version="5.3"; sha256="01q5pr776ki973bcld20cqpsz9f10bb30vj95da9gbz5af6bvb14"; depends=[Rcpp]; }; Bhat = derive2 { name="Bhat"; version="0.9-10"; sha256="1vg4pzrk3y0dk1kbf80mxsbz9ammkysh6bn26maiplmjagbj954v"; depends=[]; }; BiBitR = derive2 { name="BiBitR"; version="0.3.1"; sha256="0wfwph6nw12hb43j14i9ycj8m2zn0m5ynp7afq9cray8rbgvxfv6"; depends=[biclust cluster dendextend foreign lattice randomcoloR viridis]; }; - BiDAG = derive2 { name="BiDAG"; version="1.0.2"; sha256="1y91vb9g6642c0j7cr3g9fg999fxb7bhbfvm0bdlnaixpbnky6qa"; depends=[pcalg Rcpp]; }; + BiDAG = derive2 { name="BiDAG"; version="1.1.1"; sha256="1rncjsdyam7dnhd6ccdlvc85nnc79nsifcm24spc05k8rvx1836x"; depends=[pcalg Rcpp]; }; BiDimRegression = derive2 { name="BiDimRegression"; version="1.0.6"; sha256="1kgrk4xanvxqdq619ha08wwplmsn2xqygx4dziagx48iqfpp1lxj"; depends=[nlme]; }; BiG = derive2 { name="BiG"; version="0.1.0"; sha256="1wi2lyj3q1x47cpf1mdm5kqvjlcvbrliym6j5jbmwz7npc910vrb"; depends=[truncnorm]; }; BiSEp = derive2 { name="BiSEp"; version="2.2"; sha256="1ha7rc1q54dr2xl4bpkiwl703igmmi9qphsgv2h0flq7iz0gr351"; depends=[AnnotationDbi GOSemSim mclust]; }; @@ -371,6 +379,7 @@ in with self; { BinNonNor = derive2 { name="BinNonNor"; version="1.4"; sha256="00405ww9mh910jqww60w7cb8qbjql2jn13m60ly0bnxilg44r0bb"; depends=[BB corpcor Matrix mvtnorm]; }; BinNor = derive2 { name="BinNor"; version="2.2"; sha256="03cggpk9fhndnk9vv5i6fzsq4wjxc5405xxlxg3l9gb618kj437f"; depends=[corpcor Matrix mvtnorm psych]; }; BinOrdNonNor = derive2 { name="BinOrdNonNor"; version="1.4"; sha256="0qiy0wf9i9r44ycz1jl666nwpsv5yz7vzz1szdy22sk68lz984bv"; depends=[BB corpcor GenOrd Matrix mvtnorm OrdNor]; }; + BinQuasi = derive2 { name="BinQuasi"; version="0.1-3"; sha256="0kxn71kfaldxji1a0zwnkalpjgrvw0jjfqm2f82gvj8cgcn69lgr"; depends=[BiocGenerics csaw edgeR GenomicAlignments GenomicRanges IRanges mgcv pracma quadprog Rsamtools S4Vectors SummarizedExperiment]; }; Binarize = derive2 { name="Binarize"; version="1.2"; sha256="014iagr76y3v7ljn6zlbg1hxwbwdi889bqxa7hwmqrcybnla22ja"; depends=[diptest]; }; BinaryEMVS = derive2 { name="BinaryEMVS"; version="0.1"; sha256="1ainp6pg481yqhjc4f1pkxzxczbi3qm0kgq280vndq859ldfkpnh"; depends=[]; }; BinaryEPPM = derive2 { name="BinaryEPPM"; version="2.1"; sha256="1f4y1mrscy9z87yglbynnsis623ar0gqpda3dfm9isa2z10c24qr"; depends=[expm Formula lmtest numDeriv]; }; @@ -394,7 +403,7 @@ in with self; { BivRegBLS = derive2 { name="BivRegBLS"; version="1.0.0"; sha256="1fi399vv54dnfywxbc8yb1r58lrl7zpqkahvcx3f5svjy20dvvbw"; depends=[ellipse]; }; BivUnifBin = derive2 { name="BivUnifBin"; version="1.2"; sha256="0m4a2m7lvlm02hqqigwg3cd6sjzxnxqw1mchxj5g19whk34vwkwi"; depends=[BinOrdNonNor rootSolve]; }; BivarP = derive2 { name="BivarP"; version="1.0"; sha256="08f7sphylaj3kximy1avaf29hxj2n800adsnssh01p9bcxnzb2i4"; depends=[copula dfoptim survival]; }; - Bivariate_Pareto = derive2 { name="Bivariate.Pareto"; version="1.0.0"; sha256="0m5a41q56z6v0681y9093n5rdd33mg4fc904wjkqznlb4kn1156x"; depends=[]; }; + Bivariate_Pareto = derive2 { name="Bivariate.Pareto"; version="1.0.2"; sha256="1clfknv56zfi9wgzi5bricchvis83mc33i5d4qk3yzf2ryzxag7q"; depends=[compound_Cox]; }; BlakerCI = derive2 { name="BlakerCI"; version="1.0-5"; sha256="16zj678qzwqih92q19dma7a602d0hif2dhii5hvxdgjymg7hg2bj"; depends=[]; }; BlandAltmanLeh = derive2 { name="BlandAltmanLeh"; version="0.3.1"; sha256="11p30zqb3f9ifk3v18dspg18sclz5zxjygy7hw8ccb4bcqhx68lm"; depends=[]; }; Blaunet = derive2 { name="Blaunet"; version="2.0.7"; sha256="19p2rqbg44pi0dz2iimjgr69zyrjf0dfsic6spph81dyrri1zyvh"; depends=[cairoDevice ergm foreign gWidgets gWidgetsRGtk2 haven network plot3D plot3Drgl rgl RGtk2 sna statnet_common]; }; @@ -404,8 +413,9 @@ in with self; { Bmix = derive2 { name="Bmix"; version="0.6"; sha256="17swhn2p7jv29fkspacg2v181lkc9yd3xww2fx31xs8hsndcm857"; depends=[mvtnorm]; }; BoSSA = derive2 { name="BoSSA"; version="3.2"; sha256="03m4l77mq1h7vxfwkkp2r9acnbwd46mq85z27iizmwixnh81pgxy"; depends=[ape jsonlite phangorn plotrix RSQLite]; }; BoardGames = derive2 { name="BoardGames"; version="1.0.0"; sha256="1w3ghs29qlnjrd46lvv055snclwwy6a22fgdqszqm377w4favnhm"; depends=[]; }; - Bolstad = derive2 { name="Bolstad"; version="0.2-37"; sha256="12ivpaqx46yhvpnmncvprn4dkqgk7aqfjyvi69j8v31c1al9h5d3"; depends=[mvtnorm]; }; + Bolstad = derive2 { name="Bolstad"; version="0.2-38"; sha256="1535cfpn202vb037q027dy51kc4yg5g9mpn4l6x2q1pwrvnnx18f"; depends=[mvtnorm]; }; Bolstad2 = derive2 { name="Bolstad2"; version="1.0-28"; sha256="08cfadvl9jl9278ilsf8cm2i2a3i8zsa2f3vjzw2nlv85fwi2c7v"; depends=[]; }; + BoltzMM = derive2 { name="BoltzMM"; version="0.1.1"; sha256="0jb81wn8b5lhvlkpv4rs66qdmryf57n2xmxgwl1qk0n8bfzy8ayi"; depends=[BH Rcpp RcppArmadillo]; }; BonEV = derive2 { name="BonEV"; version="1.0"; sha256="0lmgrg53b0abb5hidyjjmwn7lf2ani84k9fil7g6j6mdajjhh1b7"; depends=[qvalue]; }; BoolFilter = derive2 { name="BoolFilter"; version="1.0.0"; sha256="14z4fzf8p4wgi939qs6v39a3xizccjcx7j4szsydllpkvxbwggbw"; depends=[BoolNet Rlab]; }; BoolNet = derive2 { name="BoolNet"; version="2.1.3"; sha256="1s64a46wfp31jsyfdg2m8269qaq7x798y2bj0dyk69di1nxx2daa"; depends=[igraph XML]; }; @@ -415,13 +425,14 @@ in with self; { BootPR = derive2 { name="BootPR"; version="0.60"; sha256="03zw7hz4gyhp6iq3sb03pc5k2fhvrpkspzi22zks25s1l7mq51bi"; depends=[]; }; BootValidation = derive2 { name="BootValidation"; version="0.1.3"; sha256="097s6yd2g6ahc7rrdpzjarmvqajvzfz2dzawm8gijiami0dkfm9m"; depends=[glmnet pbapply pROC]; }; BootWPTOS = derive2 { name="BootWPTOS"; version="1.2"; sha256="1860l11xg7444l3x42rq3636csla23gg0mi5in1zibjwn1ddc202"; depends=[fractal wavethresh]; }; - Boruta = derive2 { name="Boruta"; version="5.2.0"; sha256="111rp7lbq79p7c1w4dkzhb9wh32mns5p17xxq0qbjzaiv41377dy"; depends=[ranger]; }; + Boruta = derive2 { name="Boruta"; version="5.3.0"; sha256="181ldma4rfd14bnq5prhhsjji1hpr4jmn69b017cs08w7k0nqdi9"; depends=[ranger]; }; BosonSampling = derive2 { name="BosonSampling"; version="0.1.1"; sha256="0wxn12h903a0mlrkrr3w4qd9ld2a4bifs95i98cnl2dsb76rwf12"; depends=[Rcpp RcppArmadillo]; }; BradleyTerry2 = derive2 { name="BradleyTerry2"; version="1.0-8"; sha256="09c6zdzf5k5x7zv5m6ygl4k5xbprlpb6s3lrq432mmv8rn2yi58z"; depends=[brglm gtools lme4 qvcalc]; }; BradleyTerryScalable = derive2 { name="BradleyTerryScalable"; version="0.1.0"; sha256="0g12fkfs2sykyd6fzf924zv8gj2js452c4pf0pz2p6156chwrk8c"; depends=[dplyr igraph Matrix purrr Rcpp RcppArmadillo]; }; BrailleR = derive2 { name="BrailleR"; version="0.26.0"; sha256="1grqs3sb1xk28vmpcbidb6s805wqzkrrx41qqz7jc5y8vpspba51"; depends=[devtools extrafont ggplot2 gridGraphics gridSVG hunspell knitr magrittr moments nortest pander rmarkdown XML xtable]; }; Branching = derive2 { name="Branching"; version="0.9.4"; sha256="1c209gdasm7qipv2gg4d1hr0jmhnzz5rddgjxb7xacazc0c2mhff"; depends=[]; }; - Brobdingnag = derive2 { name="Brobdingnag"; version="1.2-4"; sha256="1saxa492f32f511vw0ys55z3kgyzhswxkylw9k9ccl87zgbszf3a"; depends=[]; }; + BreedingSchemeLanguage = derive2 { name="BreedingSchemeLanguage"; version="0.9.4"; sha256="0d51i3dpdfay3562b87la0731jfc5bq5d04mxs1qdrzw6p69ijvn"; depends=[ggplot2 lme4 Matrix Rcpp rrBLUP snowfall]; }; + Brobdingnag = derive2 { name="Brobdingnag"; version="1.2-5"; sha256="1ly9fx6mmiwrni52li0c23amsh4k36zjv9h5432igf0fgldhr3pq"; depends=[]; }; BrownDog = derive2 { name="BrownDog"; version="0.2.1"; sha256="0wnf1jcf4cakbvj9j1l7jk9mq7gd4j1il1ha2vglghqn04f27938"; depends=[httpuv jsonlite RCurl]; }; Brq = derive2 { name="Brq"; version="2.0"; sha256="0j6d1m2drzy1wyr5y25qb8gs6555vh0lkyh415kw17x9dj4ks0zx"; depends=[]; }; Brundle = derive2 { name="Brundle"; version="1.0.8"; sha256="1yj196x6xb75qgi16pgg3dyjmxmjklfjcpxymaki32drhmylf24z"; depends=[DESeq2 DiffBind lattice Rsamtools]; }; @@ -429,6 +440,7 @@ in with self; { BullsEyeR = derive2 { name="BullsEyeR"; version="0.2.0"; sha256="1p8b5w818zi7zs0n13cc3sw8z0z9mfr5cn5y5icsx1jam5amppci"; depends=[Matrix NLP slam tm topicmodels]; }; BurStFin = derive2 { name="BurStFin"; version="1.02"; sha256="16w2s0bg73swdps9r0i8lwvf1najiqyx7w7f91xrsfhmnqkkjzka"; depends=[]; }; BurStMisc = derive2 { name="BurStMisc"; version="1.1"; sha256="0cyi42zkn2dby162x9f95b3hpqxbzx25s7nahb4p86r60xj3a5c0"; depends=[]; }; + BusinessDuration = derive2 { name="BusinessDuration"; version="0.1.0"; sha256="0bx147qcf44q2bpl4rcyps18vk2dawcgn7870j8ljc8d86lqnvqd"; depends=[chron]; }; BuyseTest = derive2 { name="BuyseTest"; version="1.0"; sha256="1nfj2ajah2dg1p47g2z0zf9s24sxj4dfn3nny1h4qmqwcb4vs55g"; depends=[data_table lava Rcpp RcppArmadillo snowfall survival]; }; C50 = derive2 { name="C50"; version="0.1.1"; sha256="1pq1plsh7kf45f0ghrja0xjikaxgvq14k8k80ml5rkabyv11zg03"; depends=[Cubist partykit]; }; CADFtest = derive2 { name="CADFtest"; version="0.3-3"; sha256="06bwv728ckalzibxginzfica24w18m4g87i0i064m3q89ghmnlqm"; depends=[dynlm sandwich tseries urca]; }; @@ -440,10 +452,11 @@ in with self; { CAMAN = derive2 { name="CAMAN"; version="0.74"; sha256="0d932fbqzlxlhn7m8zfx7wr02pc7fm8398rym1jh2cdy2fk5im08"; depends=[mvtnorm sp]; }; CANSIM2R = derive2 { name="CANSIM2R"; version="0.12"; sha256="1r8fln9rqjsqhbnxvng9wpdnp6mb1gxlq3qkff4q2wbhf18wwn7w"; depends=[Hmisc reshape2]; }; CARBayes = derive2 { name="CARBayes"; version="5.0"; sha256="0kii28mf75m7ij1l0bz2w93h7m1wwq1xjvv3d3nf3ps9h8rxzi8d"; depends=[CARBayesdata coda MASS matrixcalc MCMCpack Rcpp sp spam spdep truncnorm]; }; - CARBayesST = derive2 { name="CARBayesST"; version="2.5.1"; sha256="10mzjcybj549wp07sigr7m0r93gjskmwd8i6i1017wyh1vv5vlyc"; depends=[CARBayesdata coda dplyr MASS matrixcalc Rcpp sp spam spdep testthat truncdist truncnorm]; }; + CARBayesST = derive2 { name="CARBayesST"; version="2.5.2"; sha256="0jww40ghcfiq7laprdicynn1m34ykz9l9navi9rdx8p8d7k76ykc"; depends=[CARBayesdata coda dplyr MASS matrixcalc Rcpp sp spam spdep testthat truncdist truncnorm]; }; CARBayesdata = derive2 { name="CARBayesdata"; version="2.0"; sha256="0mlqlqm50k4lqyvbjva7vji9jqa3rwi5ky5521rp5l4nqlj53sfb"; depends=[shapefiles sp]; }; CARE1 = derive2 { name="CARE1"; version="1.1.0"; sha256="1zwl4zv60mrzlzfgd7n37jjlr0j918a8ji36n94s5xw8wwipiznw"; depends=[]; }; CARLIT = derive2 { name="CARLIT"; version="1.0"; sha256="04kpjfps4ydf8fj75isqp16g1asdsyf8nszhbfkpw1zxkrmiksyp"; depends=[]; }; + CARRoT = derive2 { name="CARRoT"; version="0.1.0"; sha256="1zwc59pf0wpd9hy2apx723plag3dmas39sn7rf1cfkn7h9dm27iz"; depends=[doParallel foreach nnet Rdpack]; }; CARS = derive2 { name="CARS"; version="0.2"; sha256="1n8p4n9fbl20jps9g9pbspw54hq9y6kqbggc8h0i9pbm1b25ngrg"; depends=[np]; }; CARrampsOcl = derive2 { name="CARrampsOcl"; version="0.1.4"; sha256="1sdrir7h7xl1imipm9b71vca062dxqsqd8mg3w9f3s80x2aghxl8"; depends=[fields OpenCL]; }; CAST = derive2 { name="CAST"; version="0.1.0"; sha256="0mihpcknwk86m41x14j2g3f2s2ya20sh99ng85rcph57a4v6ar05"; depends=[caret]; }; @@ -452,10 +465,11 @@ in with self; { CATkit = derive2 { name="CATkit"; version="3.2.3"; sha256="1vl60m6x3mqgghqzpxq8aalpjpcagamjk5zg62mqpwx0vgdwv2fy"; depends=[assertr magic MASS png rtf season signal]; }; CAvariants = derive2 { name="CAvariants"; version="3.4"; sha256="1mrqvcgnxbzah7vhqqqdygds8plwswd2l8w0aq5132byhhc4kiax"; depends=[]; }; CBCgrps = derive2 { name="CBCgrps"; version="2.1"; sha256="0cvgcpvdvpvjkzkwapx0y4a666xq54dwm00w4w9n8fhgp05mnkn8"; depends=[nortest]; }; + CBDA = derive2 { name="CBDA"; version="1.0.0"; sha256="0qm77vvqjgi83i8izly995ziv9ski8kgzqyq4g81i2k7a5dp8vxv"; depends=[doParallel foreach prettydoc SuperLearner]; }; CBPS = derive2 { name="CBPS"; version="0.18"; sha256="0dd63s9nrgra51w005j35scbswbknqgv9ppawh0311hpr7anrir9"; depends=[glmnet MASS MatchIt nnet numDeriv]; }; CCA = derive2 { name="CCA"; version="1.2"; sha256="00zy6bln22qshhlll0y0adnvb8wa1f7famqyws71b6pcnwxki5ha"; depends=[fda fields]; }; CCAGFA = derive2 { name="CCAGFA"; version="1.0.8"; sha256="1jxb6d1h5p97wnr45s1fsspksqn771nib415ihxi4vj5w8s94j8b"; depends=[]; }; - CCM = derive2 { name="CCM"; version="1.1"; sha256="0gya1109w61ia6cq3jg2z5gmvjkv9xg71l2rxhrrf6bx1c2nsrq6"; depends=[]; }; + CCM = derive2 { name="CCM"; version="1.2"; sha256="1mhl7yppniybdffylddbbb65n7gmv029fb46wlsxm4yf2xkplmwy"; depends=[]; }; CCMnet = derive2 { name="CCMnet"; version="0.0-3"; sha256="0mbw3yhlgnmq7q4wnwiff7rlmciq83cch7kkav3wll6nqvxcdiax"; depends=[ergm network sna]; }; CCP = derive2 { name="CCP"; version="1.1"; sha256="07jxh33pb8llk1gx4rc80ppi35z8y1gwsf19zrca9w91aahcs8cx"; depends=[]; }; CCTpack = derive2 { name="CCTpack"; version="1.5.2"; sha256="1kkxsk9x4jz2bvldmba7fsri3zc1cjz15z0xicjmfc7lj72ngdig"; depends=[MASS mvtnorm polycor psych R2jags rjags]; }; @@ -475,6 +489,7 @@ in with self; { CEoptim = derive2 { name="CEoptim"; version="1.2"; sha256="0bbjrhl63cbx1rsr5gclbqhjpnjid8ynk2ygaf1chf8z381n7650"; depends=[MASS msm sna]; }; CFC = derive2 { name="CFC"; version="1.1.0"; sha256="0yhb314qcdxig5vg0nbzvsqiddlsqlm50vzddhpp0z5n3xfa7h2c"; depends=[abind doParallel foreach Rcpp RcppArmadillo RcppProgress survival]; }; CGP = derive2 { name="CGP"; version="2.0-2"; sha256="1mggv3c8525vbdfdc3yhpp4vm4zzdvbwyxim29zj0lzwjf9fkgqk"; depends=[]; }; + CGPfunctions = derive2 { name="CGPfunctions"; version="0.1"; sha256="0zsvhhp5pgqrn518c1cmmxama1cadg7grscimz08cclzidcqq0w1"; depends=[car dplyr ggplot2 rlang tibble]; }; CHAT = derive2 { name="CHAT"; version="1.1"; sha256="1hl4xr4lkvb7r36gcbgax6ipqc3rsvn1r03w7fk9gf9bbyg7bkhg"; depends=[DNAcopy DPpackage]; }; CHCN = derive2 { name="CHCN"; version="1.5"; sha256="18n8f002w0p0l1s5mrrsyjddn10kdbb6b7jx1v9h1m81ifdbv0xb"; depends=[bitops RCurl]; }; CHFF = derive2 { name="CHFF"; version="0.1.0"; sha256="0jv75p1bnwsad2vpxf1zwq97al9xxhk2hpnpsilf0jn0w7g9b2d3"; depends=[]; }; @@ -482,12 +497,12 @@ in with self; { CHNOSZ = derive2 { name="CHNOSZ"; version="1.1.3"; sha256="07j1xvv6rn57hirxw1dajnvk9hmj3r9bgk4fckzmmpclf22z4mwq"; depends=[]; }; CHsharp = derive2 { name="CHsharp"; version="0.4"; sha256="19mb5zzi9x4pm2z9jbha5dz4k5f1iqjv31aisyv4qh14k5ysdz2i"; depends=[KernSmooth scatterplot3d]; }; CIAAWconsensus = derive2 { name="CIAAWconsensus"; version="1.2"; sha256="0s3a9ay0l9n5kc6q0wb7f9625vba4giz1pdg3ikq4h4zhp1ldq62"; depends=[Matrix mvtnorm numDeriv stringr]; }; - CIDnetworks = derive2 { name="CIDnetworks"; version="0.8.1"; sha256="0k75mdlvm0rccag42pnhsni1kihpqsnj5bsrwlj7hdf7n8k1xb77"; depends=[igraph MASS msm mvtnorm numDeriv pbivnorm Rcpp]; }; - CIEE = derive2 { name="CIEE"; version="0.1.0"; sha256="1z4061rkryhnhf6qdxlna1w2dsy06pipx3sk1hswah4i2n7cc7sq"; depends=[survival]; }; + CIEE = derive2 { name="CIEE"; version="0.1.1"; sha256="03kq9cp0v41y0r2l9j5imcrsail2xsvlzhhhsrw454d4s9gqdql9"; depends=[survival]; }; CIFsmry = derive2 { name="CIFsmry"; version="1.0.1.1"; sha256="1m2m2zvg9ghy3bm2sll7jp4xm2vw58kc5xaxd2c9k82771m3a4j0"; depends=[]; }; CINID = derive2 { name="CINID"; version="1.2"; sha256="0pkgzi2j0045p10kjvnq8f4j1agzrqfw0czvvfrzj9yjfpj8xc99"; depends=[]; }; - CINNA = derive2 { name="CINNA"; version="1.1.3"; sha256="0y2xymk323xjkwpii1i13q38dsfi1ywlvw3ykq4928jb58f96121"; depends=[centiserve circlize corrplot dendextend factoextra FactoMineR GGally ggplot2 igraph network pheatmap plyr qdapTools Rtsne sna viridis]; }; + CINNA = derive2 { name="CINNA"; version="1.1.4"; sha256="0wq7kiycx4ly6pm9f81g0wjzrhb123zzflsx7mnxs7lc77ga2h2b"; depends=[centiserve circlize corrplot dendextend factoextra FactoMineR GGally ggplot2 igraph network pheatmap plyr qdapTools Rtsne sna viridis]; }; CINOEDV = derive2 { name="CINOEDV"; version="2.0"; sha256="0fjpxahc55zd972p3hlw9fk4dq8hpq715xff8p98kfh29dvw9mnz"; depends=[ggplot2 igraph R_matlab reshape2]; }; + CISE = derive2 { name="CISE"; version="0.1.0"; sha256="10mbi4v8dfdc9ngnrrmxpng8fnig5m8nv7799jksbcf6pnj8yv51"; depends=[far gdata glmnet MASS Matrix rARPACK]; }; CITAN = derive2 { name="CITAN"; version="2015.12-2"; sha256="08h91q7529q04izgqw3ahm4r0zjpwnwyc0vynykvv9fz2fkbk7wb"; depends=[agop DBI hash RGtk2 RSQLite stringi]; }; CIplot = derive2 { name="CIplot"; version="1.0"; sha256="0hx3dn7d8hvsh75747d9046iqriy3bjnchph8xllnvlhkrm4di1f"; depends=[MASS multcomp]; }; CLA = derive2 { name="CLA"; version="0.90-1"; sha256="1rpklm21i9rjw0vfhaz9brq9571yjynwfhpv6dp6fbl3cj7bwb8g"; depends=[]; }; @@ -512,7 +527,7 @@ in with self; { CONDOP = derive2 { name="CONDOP"; version="1.0"; sha256="0si9nm93wk9lif3r6jh2nxr4sjq1iqyfavbykja3zcy6yn05i19s"; depends=[earth GenomeInfoDb GenomicRanges IRanges mclust plyr randomForest rminer S4Vectors seqinr]; }; CONS = derive2 { name="CONS"; version="0.1.1"; sha256="0w0rca4z3hij0lbabpdnhv2lb52gx574g7bqp6q16772pi4685hf"; depends=[FactoMineR gridExtra gWidgets pander raster readxl REdaS]; }; CORE = derive2 { name="CORE"; version="3.0"; sha256="0wq9i7nscnzqiqz6zh6hglm7924261bw169q3x6l9i6jgqhvn32d"; depends=[]; }; - CORElearn = derive2 { name="CORElearn"; version="1.52.0"; sha256="01kby6kddfbv6qhmsja1q4gyqq57f7n9kk4555g258f9a6900c2n"; depends=[cluster nnet rpart]; }; + CORElearn = derive2 { name="CORElearn"; version="1.52.1"; sha256="0i37dpnphdq9pcb94rzpy80gw88zrfy8diiig94p1gdj0dk57b0f"; depends=[cluster nnet rpart]; }; CORM = derive2 { name="CORM"; version="1.0.2"; sha256="0g5plafx2h1ija8jd6rxvy8qsrqprfbwbi1kq1p4jdr9miha20nv"; depends=[cluster limma]; }; COSINE = derive2 { name="COSINE"; version="2.1"; sha256="10ypj849pmvhx117ph3k1jqa62nc4sdmv8665yahds7mh0ymhpjj"; depends=[genalg MASS]; }; COUNT = derive2 { name="COUNT"; version="1.3.4"; sha256="02f7779fy0d2bql88x5v9csbxljhnyvl8wb8h83xrmwl7kaxsdpy"; depends=[MASS msme sandwich]; }; @@ -550,6 +565,7 @@ in with self; { CaDENCE = derive2 { name="CaDENCE"; version="1.2.5"; sha256="1z3p5y1l67r470x6wrhnyjvw1ndppcm08fpj99x122j7kn6byff2"; depends=[pso]; }; Cairo = derive2 { name="Cairo"; version="1.5-9"; sha256="1x1q99r3r978rlkkm5gixkv03p0mcr6k7ydcqdmisrwnmrn7p1ia"; depends=[]; }; Calculator_LR_FNs = derive2 { name="Calculator.LR.FNs"; version="1.2"; sha256="07g7ik3xb9ijghkz94qyk87c2d4q942h4d0yicwr1j1xzcv5qzsw"; depends=[]; }; + CaliCo = derive2 { name="CaliCo"; version="0.1.0"; sha256="1fz4sx6wsrkmcfjjgjn7z26m266m844qz8ms4vk6bnhx0h1rp6qa"; depends=[coda DiceDesign DiceKriging FactoMineR ggplot2 MASS Matrix R6 Rcpp RcppArmadillo testthat]; }; CalibrateSSB = derive2 { name="CalibrateSSB"; version="1.0"; sha256="1r3318rzh29cgq72gdp16z60xkan7hyh1vj4gjg3pzbxy8zawqxx"; depends=[survey]; }; Canopy = derive2 { name="Canopy"; version="1.3.0"; sha256="0979hpphzhf4v71jx0shh3l8nffmpsn9l6f8ip2wxzcyx571i1wd"; depends=[ape fields pheatmap scatterplot3d]; }; CarletonStats = derive2 { name="CarletonStats"; version="1.3"; sha256="1a8ic2ny2zkqy6xsnzhlc3hybhk200d8jbdbjfy7jav7n757kr0y"; depends=[]; }; @@ -563,7 +579,7 @@ in with self; { Causata = derive2 { name="Causata"; version="4.2-0"; sha256="04lndjy4rdf063z75zv42b000z06ffnr91pv2sql1ks6w60zmh1m"; depends=[boot data_table foreach ggplot2 glmnet R_utils RCurl rjson RMySQL stringr XML yaml]; }; CePa = derive2 { name="CePa"; version="0.5"; sha256="1y2q72j8bqx509i62a2x9j40rj5bkpgx4z6fwj05ibazc1441asd"; depends=[igraph snow]; }; CellularAutomaton = derive2 { name="CellularAutomaton"; version="1.1-1"; sha256="0kmw2ic161xwalqa63hznic4n4hdz20hsilf2awlcldg7m9si1zd"; depends=[R_methodsS3 R_oo]; }; - CensMixReg = derive2 { name="CensMixReg"; version="3.0"; sha256="0ywqijwca4hkc0mz5gngqs9ivkvvjznrkflcv590diapxw52b2c5"; depends=[ClusterR mixsmsn mnormt mvtnorm trimcluster]; }; + CensMixReg = derive2 { name="CensMixReg"; version="3.1"; sha256="1r7w84bjdxnkhiw7gh499scc6m3ba9b2a8cwayn6sg5a524yn9gs"; depends=[ClusterR mixsmsn mnormt mvtnorm trimcluster]; }; CensRegMod = derive2 { name="CensRegMod"; version="1.0"; sha256="0qqwkxn8knhcjb6mph7mp7mma56zxslbvkfgfajq2lq4gbg901y4"; depends=[]; }; CensSpatial = derive2 { name="CensSpatial"; version="1.3"; sha256="0gd1c5qlk71avv0s3jqwb00h9cm6djg9qwzc1znc3kh61wx9kvfi"; depends=[geoR lattice moments msm mvtnorm numDeriv optimx psych raster tmvtnorm]; }; Census2016 = derive2 { name="Census2016"; version="0.2.0"; sha256="1c88jmd565v19w8dbvai10f9y5lyfmzsxsjblc3gdykf9kharvcq"; depends=[data_table]; }; @@ -585,7 +601,7 @@ in with self; { ChoR = derive2 { name="ChoR"; version="0.0-3"; sha256="085p604zbk4l88q4ig2fnfhadxvsssyjl2r48g8s99yx49cvd9sx"; depends=[commonsMath rJava]; }; ChocoLattes = derive2 { name="ChocoLattes"; version="0.1.0"; sha256="0ircdar4fswaf34969gzgn83ia891jvwl29jn4s9a87cc4qagzgr"; depends=[ggplot2 knitr plotly R_utils rmarkdown WriteXLS XML]; }; ChoiceModelR = derive2 { name="ChoiceModelR"; version="1.2"; sha256="0dkp3354gvrn44010s8fjbmkpgn1hpl4xbfs5xslql8sk8rw0n2c"; depends=[]; }; - CholWishart = derive2 { name="CholWishart"; version="0.9.0"; sha256="123m7byr4rcmg9h91g1p1v1aby5qpaidnjid9vg4gr1ywhbvjh63"; depends=[]; }; + CholWishart = derive2 { name="CholWishart"; version="0.9.2"; sha256="1dlq6a9j3ifhmw94w158czc72f31rns0xfw4zbfx4zcah678raq6"; depends=[]; }; CircE = derive2 { name="CircE"; version="1.1"; sha256="14bja3zv9wg389m6khmsy3q12hhnfcp49rvrmw47y6fh5m7ihrz2"; depends=[]; }; CircMLE = derive2 { name="CircMLE"; version="0.2.1"; sha256="031pmfyqwif16am7h1csk1dg9vhy0jgdc8w4z60kqqsgf3yk6il9"; depends=[circular]; }; CircNNTSR = derive2 { name="CircNNTSR"; version="2.2"; sha256="0z29dsvcwpra1ny8kj486dpnrak272wmkfnaiyashzcqpnkmkg03"; depends=[]; }; @@ -605,13 +621,13 @@ in with self; { ClinicalTrialSummary = derive2 { name="ClinicalTrialSummary"; version="0.1.0"; sha256="1lqf2ksgchl1j5hfkz7r5yczvkjgi3238k8nkfkd70nyil9vjq06"; depends=[Rcpp]; }; CluMix = derive2 { name="CluMix"; version="2.1"; sha256="080gd6v8yj83djmf4wg7cwk6q6w6gsg4xfsgw5qd6z8h3kpyn45m"; depends=[Biobase ClustOfVar DescTools extracat FD gplots Hmisc marray Matrix]; }; ClueR = derive2 { name="ClueR"; version="1.2"; sha256="17phjzpdx11sw259xk16h2w28xdaxxpzbh0sxli61icnssw35n7z"; depends=[e1071]; }; - ClusVis = derive2 { name="ClusVis"; version="1.0.0"; sha256="0d8s4gd5dl4mc1538rhy2pwk1xfgbq2ca76qaqrl2q3mswb1p6wp"; depends=[MASS mgcv mvtnorm Rcpp RcppArmadillo Rmixmod]; }; + ClusVis = derive2 { name="ClusVis"; version="1.1.0"; sha256="17cn3hm37jv10aybaidy89kch6814hdi8g44s94xa9li7nixzass"; depends=[MASS mgcv mvtnorm Rcpp RcppArmadillo Rmixmod VarSelLCM]; }; ClustGeo = derive2 { name="ClustGeo"; version="2.0"; sha256="1p5k2w1k7hnacbazzj2yhxh4z2jngnsl4v5a9b3c8z1dr4nhcwxc"; depends=[sp spdep]; }; ClustMMDD = derive2 { name="ClustMMDD"; version="1.0.4"; sha256="0sblf3crpai53dflhyi27yn6mg0xyy9dxhwsk8j57sq5vr50x686"; depends=[Rcpp]; }; ClustOfVar = derive2 { name="ClustOfVar"; version="1.1"; sha256="0grhkab7s58ji4cf7cxh7ahd2dxrj8aqfdf3119b40zxkxbwxcr0"; depends=[PCAmixdata]; }; ClustVarLV = derive2 { name="ClustVarLV"; version="1.5.1"; sha256="11zydj3iq15sg84kny6nklpmh8wj9j9nklkknzfqnaagai8jgsmy"; depends=[Rcpp]; }; Cluster_OBeu = derive2 { name="Cluster.OBeu"; version="1.2.1"; sha256="18is8aa496qr7afmyqy12s267ans0hhzy0xs8nzr3qp70mwrbbh1"; depends=[car cluster clValid data_tree dendextend jsonlite mclust RCurl reshape reshape2 stringr tibble]; }; - ClusterBootstrap = derive2 { name="ClusterBootstrap"; version="0.9.3"; sha256="1znyj39mwdi02xhypvr2fsx2yp45w8br7r8qkn831d6fza5pkcyc"; depends=[]; }; + ClusterBootstrap = derive2 { name="ClusterBootstrap"; version="0.9.9"; sha256="116rj2ynk37pc5ic6xlnh3gvzl6qasly8avchmwcdsg4w7i2z8l7"; depends=[]; }; ClusterR = derive2 { name="ClusterR"; version="1.1.1"; sha256="0b9x0a1s0d9nnkkcm417xsaciwb66771s14ir6n6mm7yq1g6x417"; depends=[FD ggplot2 gmp gtools OpenImageR Rcpp RcppArmadillo]; }; ClusterRankTest = derive2 { name="ClusterRankTest"; version="1.0"; sha256="01gzalhibqcdx3a6yc2cm1v77rscva73v5m5m0qkrgqdp9c8ph2a"; depends=[]; }; ClusterStability = derive2 { name="ClusterStability"; version="1.0.3"; sha256="1laa5m3y1rc7jr8q3i9qb3izs7qmadz169w9xm8q3mm3834ngn9b"; depends=[cluster clusterCrit copula Rcpp WeightedCluster]; }; @@ -624,6 +640,7 @@ in with self; { CoinMinD = derive2 { name="CoinMinD"; version="1.1"; sha256="0invnbj5589wbs0k2w5aq9qak7axc3s0g9nw85c48lnl0v95s91i"; depends=[MCMCpack]; }; CollapsABEL = derive2 { name="CollapsABEL"; version="0.10.11"; sha256="0libm1wv34av3vm2vvbqcnxjh4y1rwfi8qzjca8qdz9490vngags"; depends=[biganalytics bigmemory collUtils dplyr ggplot2 haplo_stats R_utils rJava RSQLite stringr]; }; CollapseLevels = derive2 { name="CollapseLevels"; version="0.2.0"; sha256="1fn5k83lh0vw5j9vhq0x6ksbkrm25acpslav85wfyknsj9vzmzid"; depends=[dplyr ggplot2 lazyeval magrittr]; }; + CollessLike = derive2 { name="CollessLike"; version="1.0"; sha256="080mrvszysdqvx03sd4aczvhs1zmhc6fx8zp5nwrh7mmyajslxkx"; depends=[ape igraph]; }; CollocInfer = derive2 { name="CollocInfer"; version="1.0.4"; sha256="1iwf5g2y7i0j8dc19hdhya4m6g47jj968glnclj7a2yaq2yx37cj"; depends=[deSolve fda MASS Matrix spam]; }; ColorPalette = derive2 { name="ColorPalette"; version="1.0-1"; sha256="1dsj5njikx3qm2lnamqqg4qgwwyr11fwx9s5sdi7dkfx3nmf6dac"; depends=[]; }; ComICS = derive2 { name="ComICS"; version="1.0.3"; sha256="1jfs0ygr88532jjw2ablyn2r3sg3hfsv5yrm4gkdgzakychj3dy2"; depends=[glmnet]; }; @@ -644,7 +661,7 @@ in with self; { CompQuadForm = derive2 { name="CompQuadForm"; version="1.4.3"; sha256="1i30hrqdk64q17vsn918c3q79brchgx2wzh1gbsgbn0dh1ncabq4"; depends=[]; }; CompR = derive2 { name="CompR"; version="1.0"; sha256="1k4q0yanvhdh3ksia7d42lxky19yci5vxhmi6h716g9sxzfsjk6b"; depends=[MASS]; }; CompRandFld = derive2 { name="CompRandFld"; version="1.0.3-4"; sha256="1a3j5j50fz3f8vkvdmfccv5hn00spk08xanadqxpdy8pn925gqqb"; depends=[]; }; - CompareCausalNetworks = derive2 { name="CompareCausalNetworks"; version="0.1.9"; sha256="086yacr5fgqzgl1hh0m6qpx59smk66bsxglaic3ynd9n9k1n9p6c"; depends=[data_table expm Matrix]; }; + CompareCausalNetworks = derive2 { name="CompareCausalNetworks"; version="0.2.0"; sha256="13gwxnqa0r805i1b5z3ym4pp297305jwvdn7b35pf2v9zlcnyh7c"; depends=[data_table expm Matrix]; }; CompareTests = derive2 { name="CompareTests"; version="1.2"; sha256="1z96kh851bpr2szgyjszkpv6m5ma6abz7hrm50fgvfpgxkj7f4yi"; depends=[]; }; CompetingRisk = derive2 { name="CompetingRisk"; version="1.0"; sha256="0lfpqz3a8csgmv8cg4clc1dzsgxvssfr5cyn1mgyxfzssch85drm"; depends=[MASS Matrix reshape2 survival wesanderson]; }; Compind = derive2 { name="Compind"; version="2.0"; sha256="1qadyl96c9cmk1i763gc055hgv414ha59418lqk183kwl5sgbqy5"; depends=[Benchmarking boot GPArotation Hmisc lpSolve MASS nonparaeff np psych smaa spdep]; }; @@ -654,7 +671,7 @@ in with self; { ConR = derive2 { name="ConR"; version="1.2.1"; sha256="0k6761x5dfibbbzfzmkc73ahfmw54d5rpj0rj32232qdlk48hqk5"; depends=[fields geosphere maptools raster rgdal rgeos sp spatstat spatstat_utils]; }; ConSpline = derive2 { name="ConSpline"; version="1.2"; sha256="16r0v0llj0pri69jqxribp8dpzh6yn6acpq20aaky14fyh3i4q7x"; depends=[coneproj]; }; Conake = derive2 { name="Conake"; version="1.0"; sha256="1rj1rv8r53516jqhwp9xqqwjxh4gx1w47c0bw59f87wiy5pbchpf"; depends=[]; }; - CondIndTests = derive2 { name="CondIndTests"; version="0.1.1"; sha256="0n9ishrq9ilray5cq37q7fyizaffbwx36s5lf9z60mh6hn3dppha"; depends=[caTools kernlab lawstat MASS mgcv quantregForest randomForest RPtests]; }; + CondIndTests = derive2 { name="CondIndTests"; version="0.1.3"; sha256="1lmys6a3cwk8c3d08lpb2dny9madsdf2fnslx6qjx27cg95bhdcb"; depends=[caTools kernlab lawstat MASS mgcv quantregForest randomForest RPtests]; }; CondReg = derive2 { name="CondReg"; version="0.20"; sha256="1ffnrjfjcb66i9nyvidkcn4k9pcj4r7xanjwzcxcrj2qm39apkqx"; depends=[]; }; ConfigParser = derive2 { name="ConfigParser"; version="1.0.0"; sha256="0jjh6gz5qcqhirzkmg7a4lnf8n3mjly15x2mvbvdpjkk7iv3w9m3"; depends=[ini R6]; }; ConfoundedMeta = derive2 { name="ConfoundedMeta"; version="1.3.0"; sha256="17l6dfff2v0a4p022qclrmkzi78ga9adkgxgrgk9imz0n9m9424d"; depends=[ggplot2 metafor]; }; @@ -667,13 +684,14 @@ in with self; { ConvCalendar = derive2 { name="ConvCalendar"; version="1.2"; sha256="0yq9a42gw3pxxwvpbj6zz5a5zl7g5vkswq3mjjv5r28zwa3v05vc"; depends=[]; }; ConvergenceClubs = derive2 { name="ConvergenceClubs"; version="1.0.0"; sha256="0ndb7k2lfv6014a7c61a2mmcsywpa478lk6fh7d0jkv55hmnzvs9"; depends=[lmtest sandwich]; }; ConvergenceConcepts = derive2 { name="ConvergenceConcepts"; version="1.2.1"; sha256="0kl67ds6369mxl2i93h43r00ji12qkg0k9m4jhcxsb0ydd8rfqgp"; depends=[lattice tkrplot]; }; - CoordinateCleaner = derive2 { name="CoordinateCleaner"; version="1.0-6"; sha256="1jhyb9hw10cpsac6jyrp21g9habpy0mqglg1aq6qyi59c4n95b46"; depends=[geosphere ggplot2 raster rgeos rnaturalearth sp]; }; + CoordinateCleaner = derive2 { name="CoordinateCleaner"; version="1.0-7"; sha256="00x2ijyg1bj2xp679i453d4fd58qp7mfj3pvv3cddh0hl8yfns18"; depends=[geosphere ggplot2 raster rgeos rnaturalearth sp]; }; Copula_Markov = derive2 { name="Copula.Markov"; version="1.1"; sha256="0pgzrgd9bzf2qh9b7h0y4mmszlxk1wxdwlid3xh7rk7pif3mw3qd"; depends=[]; }; CopulaDTA = derive2 { name="CopulaDTA"; version="1.0.0"; sha256="1bx0jvlbhaxf4yhrfpd5l5zp7kmp6f17ckb1y9974sgc7s3hpqcd"; depends=[ggplot2 plyr reshape2 rstan]; }; CopulaREMADA = derive2 { name="CopulaREMADA"; version="1.0"; sha256="021x40l5p6ip5br3qnca6nywkx9fpmgx5jm8i2dngj6yz6rc3hag"; depends=[matlab statmod tensor]; }; CopulaRegression = derive2 { name="CopulaRegression"; version="0.1-5"; sha256="0dd1n7b23yww36718khi6a5kgy8qjpkrh0k433c265653mf1siq8"; depends=[MASS VineCopula]; }; CopyDetect = derive2 { name="CopyDetect"; version="1.2"; sha256="1sahrlg1gk1q8ciq0a8hxrlyci5i8jxz8pjpy04alckxdrxfpqbi"; depends=[irtoys]; }; CorReg = derive2 { name="CorReg"; version="1.2.1"; sha256="1c7vvlxza0r9r07rr464y3kfkrnzz15l4jc7s727wjrw2az8rnpy"; depends=[corrplot elasticnet glmnet lars MASS Matrix mclust mvtnorm Rcpp RcppEigen Rmixmod rpart]; }; + CorShrink = derive2 { name="CorShrink"; version="0.1-5"; sha256="03g5njb191nqiy0lmk8jrwyrnl3w733b8h0krkbsjh2zravyw1xc"; depends=[ashr corpcor corrplot gridExtra Matrix reshape2]; }; Corbi = derive2 { name="Corbi"; version="0.4-2"; sha256="0h088iplryaipnfp8svw3djh016z23lv66q51gfbqpvchvjdwypw"; depends=[CRF Matrix mpmi]; }; CorporaCoCo = derive2 { name="CorporaCoCo"; version="1.1-0"; sha256="1s3wlcy6mnw9riivw5lc4gd6bjbsd77m15ipr95g46isdcrli8zb"; depends=[data_table RColorBrewer rlist]; }; CorrBin = derive2 { name="CorrBin"; version="1.5"; sha256="1kg8kms76z127j2vmf7v162n0sh2jqylw4i7c35x5sig4q22m9gy"; depends=[boot combinat dirmult geepack mvtnorm]; }; @@ -691,9 +709,9 @@ in with self; { CovSelHigh = derive2 { name="CovSelHigh"; version="1.1.1"; sha256="0dvvpkqml2k00gicpgp475z1rjspq3s37ys1mam29k54qlshhny6"; depends=[bartMachine bindata bnlearn doParallel doRNG foreach glmnet MASS Matching randomForest tmle xtable]; }; CovTools = derive2 { name="CovTools"; version="0.3.0"; sha256="0p5mfrdp4p5fz9ld0rqrd2kj73hi1dzx0iwl4rihhgfgdplzknhf"; depends=[doParallel expm foreach geigen Matrix mvtnorm pracma Rcpp RcppArmadillo Rdpack shapes]; }; CoxBoost = derive2 { name="CoxBoost"; version="1.4"; sha256="1bxkanc8zr4g3abn4ds5wqibv65flvm4y648fs9s0l4vc9vmyshg"; depends=[Matrix prodlim survival]; }; + CoxPhLb = derive2 { name="CoxPhLb"; version="1.0.0"; sha256="1j8dvbjv4h0zdjvwvpswdlsb9pf3gxixh2rhl0m1kxm6f6h5ig0z"; depends=[survival]; }; CoxPlus = derive2 { name="CoxPlus"; version="1.1.1"; sha256="038wsz206bgc0pnzx403b5ihcwhxpkrpxmwvrvqcxf8333pb62l5"; depends=[Rcpp RcppArmadillo]; }; CoxRidge = derive2 { name="CoxRidge"; version="0.9.2"; sha256="0p65mg4hzdgks03k1lj90yj6qbk50s94rwvcwzkb5xxxwrijd10r"; depends=[survival]; }; - Coxnet = derive2 { name="Coxnet"; version="0.2"; sha256="023l1fcs0g5qqlslqfwb51nkmcqa0d5qp9bibhndd8gq7raz6ws6"; depends=[Matrix Rcpp RcppEigen]; }; CpGFilter = derive2 { name="CpGFilter"; version="1.1"; sha256="0ccvk7lawmay0wqdyhs6ww7396dcfzazn72sq6zwyw7dl45k2j0i"; depends=[matrixStats]; }; CpGassoc = derive2 { name="CpGassoc"; version="2.60"; sha256="1zx18x8pxjl2ajnj7a7lb8383m75ysg17f4mzz0vkgl5mnf617ny"; depends=[nlme]; }; Cprob = derive2 { name="Cprob"; version="1.4"; sha256="1kjw5hhb3fy12xlyg01i8ynl78gx0r57kvmgafbqix1s3pg2hyw6"; depends=[geepack lattice lgtdl prodlim tpr]; }; @@ -709,6 +727,7 @@ in with self; { CsChange = derive2 { name="CsChange"; version="0.1.3"; sha256="08ss1dzwirmnlgw440g3k3vnrl1imhmd2gljnid8z2dzj5450alr"; depends=[boot Hmisc rms survival]; }; CuCubes = derive2 { name="CuCubes"; version="0.1.0"; sha256="1cpazar85rp8xfjvy0vxivr61grzvxz7a9mirxvhynln964by6ns"; depends=[]; }; Cubist = derive2 { name="Cubist"; version="0.2.1"; sha256="18w82l44b6jsmz19l34dmaqb22qvjcwhs4cddzhs6pzicvqw645k"; depends=[lattice reshape2]; }; + CustomerScoringMetrics = derive2 { name="CustomerScoringMetrics"; version="1.0.0"; sha256="166v0hbxy4xgbfqh7sx6zsrv4pghqpimx5xry3h2qwynnvr4ng1a"; depends=[]; }; Cyclops = derive2 { name="Cyclops"; version="1.3.0"; sha256="0sznzzz21qn1cxxfa3wiwvfza7lykzzf0xyqvawha9vzm8qzgqnq"; depends=[BH bit ff ffbase Matrix Rcpp RcppEigen RcppParallel survival]; }; CytobankAPI = derive2 { name="CytobankAPI"; version="1.1.0"; sha256="1014r17krw74drykdlw24pgqylidp8yxa00zhf340ilcxfpacxyi"; depends=[curl httr jsonlite]; }; CytobankAPIstats = derive2 { name="CytobankAPIstats"; version="1.0"; sha256="0hr74igy43d5ybzlgqpvx9ingw6h83w502b6k55cp6zqcv5rl8d5"; depends=[CytobankAPI]; }; @@ -724,7 +743,7 @@ in with self; { DAGGER = derive2 { name="DAGGER"; version="1.4"; sha256="0b2hzv001xhch7pqgb53lfpdcjwg5lj33i6pb884l1kx92svjfr7"; depends=[Matrix quadprog Rglpk]; }; DAISIE = derive2 { name="DAISIE"; version="1.4"; sha256="16653wwz20lhf3bpzflpj5d1h7j3cqyfaqk5gn24aifga2jc0wbb"; depends=[DDD deSolve Matrix subplex tensor]; }; DAKS = derive2 { name="DAKS"; version="2.1-3"; sha256="0vmpwxvksnmyq40faimbgpj0y3zbk519986n38ipwdfzllcg0zs4"; depends=[relations sets]; }; - DALEX = derive2 { name="DALEX"; version="0.1.1"; sha256="0nafdpfiawmlv6v43i4glhq1p3aaqph5f8ikcvi75l44n1rwkazk"; depends=[ALEPlot breakDown ggplot2 pdp]; }; + DALEX = derive2 { name="DALEX"; version="0.2.0"; sha256="0dls9v912bcww4csax35spxl9zx71g9ig9inzi9cr9ffinpw9rgk"; depends=[ALEPlot breakDown factorMerger ggplot2 ggpubr pdp]; }; DALY = derive2 { name="DALY"; version="1.5.0"; sha256="1v7ld01xcn5jiygl1c3xhd5h71ip90lks87fs9gmpnivp8jz5cr5"; depends=[]; }; DAMOCLES = derive2 { name="DAMOCLES"; version="1.1"; sha256="07z8mynhqnk1zcvm84w09xzkiy2dfxwhmnpi6gaddr3p0waql4gj"; depends=[ape caper deSolve expm geiger matrixStats picante]; }; DAMisc = derive2 { name="DAMisc"; version="1.4-3"; sha256="1hic53vi7mj4fvggxjl4d3j4zw8wwczh6pldyi8idrhm45hw2nh4"; depends=[boot car effects gdata lattice MASS nnet pscl QRM sm VGAM xtable]; }; @@ -732,6 +751,7 @@ in with self; { DATforDCEMRI = derive2 { name="DATforDCEMRI"; version="0.55"; sha256="0v26a1gi8l21ga5nqcnyfaa7gc8zxq6wk95b96ajgpdybb0l9s53"; depends=[akima lattice locfit matlab R_methodsS3 R_oo xtable]; }; DBEST = derive2 { name="DBEST"; version="1.8"; sha256="1a598g02hpfgv572gchllqkppynnsp4lx764jg0g66w3b66k0kdy"; depends=[zoo]; }; DBGSA = derive2 { name="DBGSA"; version="1.2"; sha256="04zqh9y3nqcdzs5jn8aaq5idy9zl450ikvl788xs860wlg692qv2"; depends=[fdrtool]; }; + DBHC = derive2 { name="DBHC"; version="0.0.2"; sha256="08sl6gv1dw2kpk1zylvyqqga6xvhzhpp5zxa9ql1hyzc2i43jivq"; depends=[ggplot2 reshape2 seqHMM TraMineR]; }; DBI = derive2 { name="DBI"; version="0.8"; sha256="16nf8flxr5vdz8yrpprfbzydy3ajixkp9hc8ibd9n7r9nc29waym"; depends=[]; }; DBItest = derive2 { name="DBItest"; version="1.5-2"; sha256="05wizjm2b97fsdha2i391h38xb0zrkhnd036qvdcm0r5l0y56sm8"; depends=[blob DBI desc hms R6 testthat withr]; }; DBKGrad = derive2 { name="DBKGrad"; version="1.6"; sha256="0207zx0v1x3zhfbs0h1ssxc1b683k111f90k8ybhknb147104knr"; depends=[lattice minpack_lm SDD TSA]; }; @@ -762,21 +782,22 @@ in with self; { DFIT = derive2 { name="DFIT"; version="1.0-3"; sha256="1h0wvcplb7j7dqz9hkaw30x92ngxzkdvkwpg0142hrqb201zfrac"; depends=[ggplot2 mvtnorm simex]; }; DGCA = derive2 { name="DGCA"; version="1.0.1"; sha256="1lqqzrsidkli4bk4jikq5f75jzqyzhv94n882yic5ndxgv26p9ic"; depends=[matrixStats WGCNA]; }; DGM = derive2 { name="DGM"; version="1.7.2"; sha256="0z0f8bazzsahvjkpfif50db700mqb7arcglwsfxcar9qdy082vsn"; depends=[data_table ggplot2 Rcpp RcppArmadillo reshape2]; }; - DHARMa = derive2 { name="DHARMa"; version="0.1.5"; sha256="1mgvpyhllp7pqnas5sbn6393jkin205109g2b4pn3diyb20avqwp"; depends=[ape doParallel foreach gap lme4 lmtest MASS mgcv qrnn sfsmisc]; }; - DHS_rates = derive2 { name="DHS.rates"; version="0.2.0"; sha256="0fhbsylm0j6s4ah5iam2rc0c716zljhqf8l87n3gll5kfh08427x"; depends=[reshape survey]; }; + DGVM3D = derive2 { name="DGVM3D"; version="1.0.0"; sha256="17cxv8rm7kmxms7v7hzbwbdwa3xl1hwgiljf97ppwswglqyik9iv"; depends=[rgl]; }; + DHARMa = derive2 { name="DHARMa"; version="0.1.6"; sha256="1b7yqy4id6ydvyqrgpl5zkmch64rl2b0jcj6ww5rq6afzgkfbfay"; depends=[ape doParallel foreach gap lme4 lmtest MASS mgcv qrnn sfsmisc]; }; + DHS_rates = derive2 { name="DHS.rates"; version="0.3.0"; sha256="039pa3pln7vj2md4kcv9070qbm8v7aknhhgh49hs5xiwa682g1f7"; depends=[haven matrixStats reshape survey]; }; DIFboost = derive2 { name="DIFboost"; version="0.2"; sha256="0wyjk870n18lq0dwhm9ndsh5vv0d8wkrbcky68w454vzrrw1q9h8"; depends=[mboost penalized stabs]; }; DIFlasso = derive2 { name="DIFlasso"; version="1.0-3"; sha256="195wiy0jjkq6bh2b6wrjmr5l34pzx0i2qqvwp4pzv77sx737ds0v"; depends=[grplasso miscTools penalized]; }; DIFtree = derive2 { name="DIFtree"; version="2.1.4"; sha256="16cyd634jflaszpfq0ymwlbv57ci1iyffwai641jczn8cny504zl"; depends=[penalized plotrix]; }; DIME = derive2 { name="DIME"; version="1.2"; sha256="11l6mk6i3kqphrnq4iwk4b0ridbbpg2pr4pyqaqbsb06ng899xw0"; depends=[]; }; DIRECT = derive2 { name="DIRECT"; version="1.0.1"; sha256="00z4xlc9kxn19lw2b8xq6krsf5v3wfbr1ghl5ah5shr9dnv84lc1"; depends=[]; }; DISTRIB = derive2 { name="DISTRIB"; version="1.0"; sha256="0whwmmdx2k2vrjjkz4ww9v7z9ad3835819pby91119lyic27w727"; depends=[]; }; - DJL = derive2 { name="DJL"; version="2.6"; sha256="1vvfh9hpanac2g22k4hqy3y7j3mn34mvasw0rx3y4vjbv3h05yw6"; depends=[car lpSolveAPI]; }; + DJL = derive2 { name="DJL"; version="2.7"; sha256="1p0jd2hn6an3kkc85xkkj36x7iwi43k1yrnmzy0mb5qrbvx07hlj"; depends=[car lpSolveAPI]; }; DLASSO = derive2 { name="DLASSO"; version="2.0.2"; sha256="0xdygf6h89d9z4kqb46iqfxgdzq9dmkrxf9ypw78l4d8n9xx2gaa"; depends=[MASS]; }; - DLMtool = derive2 { name="DLMtool"; version="5.0.2"; sha256="0fz8qy3328wmxqg5s13bl2qr4f54zc2bk4amb9kz490vf00by0iw"; depends=[abind coda devtools ggplot2 ggrepel gridExtra knitr LBSPR MASS mvtnorm openxlsx r4ss Rcpp RcppArmadillo readxl rmarkdown snowfall]; }; + DLMtool = derive2 { name="DLMtool"; version="5.1.3"; sha256="0n7sx577fffxbxfbwy19py2hm00rb403n4fvn9j6pcdi433mfx59"; depends=[abind coda devtools ggplot2 ggrepel gridExtra knitr MASS mvtnorm openxlsx r4ss Rcpp RcppArmadillo readxl rmarkdown snowfall]; }; DMMF = derive2 { name="DMMF"; version="0.4.0.1"; sha256="0fypj0a0kjzfghazs55mxkig9n3ngjmbi3xmdxkpa35jbn71bfdd"; depends=[raster rgdal sp]; }; DMR = derive2 { name="DMR"; version="2.0"; sha256="1kal3bvhwqs00b6p6kl0ja35pcz9v9y569148qfhy94m319fcpzm"; depends=[magic]; }; DMRMark = derive2 { name="DMRMark"; version="1.1.1"; sha256="15wr6j0v9kvbv8y6flkp4svfqy059ziv89nxv91vp0pjmavhpdlz"; depends=[ellipse MCMCpack mvtnorm]; }; - DMRnet = derive2 { name="DMRnet"; version="0.1.0"; sha256="0p5iyj6zqrv1hsfdq7bp96ly8dkf2ky6gzilrha336lhm35ym7sr"; depends=[glmnet grpreg]; }; + DMRnet = derive2 { name="DMRnet"; version="0.2.0"; sha256="1rbba8w4li240gw5z675d7skm72rh0zxzp4rhsn6ivj72jya7jw4"; depends=[glmnet grpreg]; }; DMwR = derive2 { name="DMwR"; version="0.4.1"; sha256="1qrykl9zdvgm4c801iix5rxmhk9vbwnrq9cnc58ms5jf34hnmbcf"; depends=[abind class lattice quantmod ROCR rpart xts zoo]; }; DMwR2 = derive2 { name="DMwR2"; version="0.0.2"; sha256="1vzfbz2k05j8r2hpig3d2grb99rnnh2s1sviii3prcyqicxfh0i9"; depends=[class DBI dplyr quantmod readr rpart xts zoo]; }; DNAseqtest = derive2 { name="DNAseqtest"; version="1.0"; sha256="1mpmf40vrpw8m75rlqchsnyrz12pgg5bkz7wfca5yy5sbbiwk5pf"; depends=[]; }; @@ -789,6 +810,7 @@ in with self; { DOT = derive2 { name="DOT"; version="0.1"; sha256="0qh5n57cp9c2n5yn59q4wggz82943pwfanp3kx869aba2x3sj30i"; depends=[V8]; }; DOvalidation = derive2 { name="DOvalidation"; version="1.1.0"; sha256="1mzws3w7djpxnfqxjcqwgia7p17kb0qlnzj6qcfg2m1vamb1cn2z"; depends=[]; }; DPBBM = derive2 { name="DPBBM"; version="0.2.5"; sha256="1qypxrcm3sb727lqb09ssjf3hblixqayw3qsyql01imrxwm609i2"; depends=[CEoptim gplots tmvtnorm VGAM]; }; + DPWeibull = derive2 { name="DPWeibull"; version="1.2"; sha256="0s1c3pn8pivg4227xhis5scmh9zc6fq36inphy6226hriny6q0v9"; depends=[DPpackage matrixStats Rcpp truncdist]; }; DPpackage = derive2 { name="DPpackage"; version="1.1-7.4"; sha256="0lfw55kbjwr1dqkd98p6488p6c0nh5pkfkc9wpds8wsqm38siad6"; depends=[MASS nlme survival]; }; DREGAR = derive2 { name="DREGAR"; version="0.1.3.0"; sha256="15cplshs85r0z659mc7xmj5db7vc95wxs01c34isc22p8z0a287i"; depends=[msgps]; }; DRIP = derive2 { name="DRIP"; version="1.1"; sha256="050xfq30fp9m03ig938bci2haiglj6jj4k327fpz7r2y78cgcnn4"; depends=[caTools readbitmap]; }; @@ -804,10 +826,11 @@ in with self; { DT = derive2 { name="DT"; version="0.4"; sha256="06gsqz7p2fv6hc3fm3759gaa50krcfrqrmy7qbxyam6a36w9daix"; depends=[crosstalk htmltools htmlwidgets magrittr]; }; DTComPair = derive2 { name="DTComPair"; version="1.0.3"; sha256="1af2293ckkpz0gjcibgzzvz37852cav4wa4girpc87yn3p4ajlri"; depends=[gee PropCIs]; }; DTDA = derive2 { name="DTDA"; version="2.1-1"; sha256="0hi2qjcwd6zrzx87mdn1kns5f2h6jh7sz9jpgbi0p0i80xg8jnn3"; depends=[]; }; + DTDA_ni = derive2 { name="DTDA.ni"; version="1.0"; sha256="0c45cz4y629bc0jnf3m35ywqkrnjcdqbssbb6m10j8b4gszdi35i"; depends=[]; }; DTK = derive2 { name="DTK"; version="3.5"; sha256="0nxcvx25by2nfi47samzpfrd65qpgvcgd5hnq9psx83gv502g55l"; depends=[]; }; DTMCPack = derive2 { name="DTMCPack"; version="0.1-2"; sha256="0bibas5cf06qq834x9q2l2fyh6q9wrg07k8cn6almcyirzax6811"; depends=[]; }; DTR = derive2 { name="DTR"; version="1.7"; sha256="1lzvk9ar6xf3n2vvy8vb9mvrbx3nafzzhvz5g7vf79jd71yz54jd"; depends=[aod ggplot2 survival]; }; - DTRlearn = derive2 { name="DTRlearn"; version="1.2"; sha256="1dakwlafs27nkjsiknnwxnb2hgc2xdpi5mb6dmzpjig7hg2f8d3f"; depends=[ggplot2 glmnet kernlab MASS]; }; + DTRlearn = derive2 { name="DTRlearn"; version="1.3"; sha256="0ngzvjlzn20pff1ihw87nar7riiva4pnfih7hlsr0iszd3v3b1gq"; depends=[ggplot2 glmnet kernlab MASS]; }; DTRreg = derive2 { name="DTRreg"; version="1.3"; sha256="1144kcqblyrpdqyj9as6y47iq3x99bf76hdw6j43cmgcs11gapc3"; depends=[]; }; DVHmetrics = derive2 { name="DVHmetrics"; version="0.3.7"; sha256="1syxw49pzh36nfq0zfr83cwpac86fnj0b7nlqiin4jb00h8vrf6i"; depends=[ggplot2 KernSmooth markdown reshape2 shiny]; }; DWDLargeR = derive2 { name="DWDLargeR"; version="0.1-0"; sha256="1bxdvgj38xv2xj98njpyhy12b54nccwnc3v92kkpd3i7nwbw48dy"; depends=[Matrix SparseM]; }; @@ -822,6 +845,7 @@ in with self; { Dasst = derive2 { name="Dasst"; version="0.3.3"; sha256="0nrcvcfzr2y1jc984rpi3fmggns65sphc6nqr9l91h5qvpdcw7cl"; depends=[]; }; DatABEL = derive2 { name="DatABEL"; version="0.9-6"; sha256="1w0w3gwacqrbqjdcngdp44d2gb16pq9grq2f8j2bhbxc4nkx12n1"; depends=[]; }; DatAssim = derive2 { name="DatAssim"; version="1.0"; sha256="120gazyyxda9faydv2lyqgvflhqi2fhih1szq0sy5v1gh4xb0hhy"; depends=[Rcpp RcppArmadillo]; }; + Data2LD = derive2 { name="Data2LD"; version="0.1-1"; sha256="1klvp4zjbv4g07rahfmwxdms0bh7ca064iap681r1w5jbyq8pkzx"; depends=[fda Matrix R_cache]; }; DataClean = derive2 { name="DataClean"; version="1.0"; sha256="0wkafjyp6c2mx7g1bpz2pbxyl5nm2wba2hly8miizv0fdc762za5"; depends=[xlsx XML]; }; DataCombine = derive2 { name="DataCombine"; version="0.2.21"; sha256="0iwb4726bk0cjhay694dp43b1553yyk9lpxbncs85kz229b26arm"; depends=[data_table dplyr]; }; DataEntry = derive2 { name="DataEntry"; version="0.9-3"; sha256="0gfsg7wfwy88x7y1dwpgwi6fkizjnhrzj0a5ij70y4a4sjmyiy55"; depends=[digest gWidgets2 gWidgets2RGtk2 RGtk2]; }; @@ -852,7 +876,7 @@ in with self; { Density_T_HoldOut = derive2 { name="Density.T.HoldOut"; version="2.00"; sha256="0kh5nns1kqyiqqfsgvxhx774i2mf4gcim8fp5jjyq577x4679r31"; depends=[histogram]; }; DepthProc = derive2 { name="DepthProc"; version="2.0.2"; sha256="0n9hs6fp047gnd8y87rzx5qcr3hqg3pdck97hcbzkd8jsi1b1daw"; depends=[colorspace geometry ggplot2 lattice MASS np Rcpp RcppArmadillo rrcov sm zoo]; }; Deriv = derive2 { name="Deriv"; version="3.8.4"; sha256="1la2afxr9nilb32s3nc1j3spxzgcqn48aywq96pckpjk8vypsjyy"; depends=[]; }; - DescTools = derive2 { name="DescTools"; version="0.99.23"; sha256="0y3br8s2kvvi552xv5ir2av810l8qknc06hw9x6bryjxj42ywa4i"; depends=[BH boot expm foreign manipulate MASS mvtnorm Rcpp]; }; + DescTools = derive2 { name="DescTools"; version="0.99.24"; sha256="1ns0vqpnfj995dq1l6pmah2wi6l8zacndha6brhy97hyn84mc83k"; depends=[BH boot expm foreign manipulate MASS mvtnorm Rcpp]; }; DescToolsAddIns = derive2 { name="DescToolsAddIns"; version="1.0"; sha256="1qyxbnmr2dycyfivdyvdqcbpk993q9glrixgp64pflx3sqz91yyk"; depends=[DescTools rstudioapi]; }; DescribeDisplay = derive2 { name="DescribeDisplay"; version="0.2.5"; sha256="02b6yjgklsdjh3rikc8f5wfx08ymbygr3fyq1c134xhffhykrlgp"; depends=[GGally ggplot2 plyr reshape2 scales]; }; DescriptiveStats_OBeu = derive2 { name="DescriptiveStats.OBeu"; version="1.2.1"; sha256="0mb33ihqr8jj1ispykvyc7jn1wyaagb535ya5jgwlqrians41ihc"; depends=[jsonlite RCurl reshape]; }; @@ -880,9 +904,9 @@ in with self; { DirectEffects = derive2 { name="DirectEffects"; version="0.1"; sha256="0c9inxn624c5rxa86d8r8jhsrm42rcsm4xxrwg7h3lvpairiyil2"; depends=[Formula]; }; DirectStandardisation = derive2 { name="DirectStandardisation"; version="1.2"; sha256="060nscnn7wamnbb45a55wr6rirlbpwwjz0kxiw3aiqkm16ilzfbs"; depends=[]; }; DirectedClustering = derive2 { name="DirectedClustering"; version="0.1.1"; sha256="1shdqz0c5bbgknvfqr3ais26cb5mpywnah3d3584w97sy8v7gxm2"; depends=[igraph]; }; - Directional = derive2 { name="Directional"; version="3.0"; sha256="08m6yg2jpz8fcdw4dlbpb1679d72q059ab2sgc3wj53m7vqirm4a"; depends=[doParallel foreach MASS RcppZiggurat Rfast]; }; + Directional = derive2 { name="Directional"; version="3.1"; sha256="0zx6wflc3hnal3n0ql427dsw8npd46sbz4v42lj53yax71cdg8lj"; depends=[doParallel foreach MASS RcppZiggurat Rfast]; }; DirichletReg = derive2 { name="DirichletReg"; version="0.6-3"; sha256="0qvnsbyn3livp5jrnxskf5sf7f2svy5mqkmnhzncb9bwf3kxpyla"; depends=[Formula maxLik rgl]; }; - DisHet = derive2 { name="DisHet"; version="0.2.1"; sha256="1w0fpc73pk1fs05j328aw368qcabxfxz97zfqr5mda7wcmkwwnj3"; depends=[gtools matrixStats]; }; + DisHet = derive2 { name="DisHet"; version="0.2.2"; sha256="03jg7y8hd7c7bi9df37g1p7i28l7l2hyana4y2js7hgc88gv376l"; depends=[gtools matrixStats]; }; Disake = derive2 { name="Disake"; version="1.5"; sha256="1fw45fmnir6h34jw8917mhyz6cgzbq4ywyyf51qxhm68wgzy9h17"; depends=[]; }; DiscreteInverseWeibull = derive2 { name="DiscreteInverseWeibull"; version="1.0.2"; sha256="0vjsvl4m4zccfgizv7mzidbbpzqcm101x448vllcdcrn2xlnkmnq"; depends=[Rsolnp]; }; DiscreteLaplace = derive2 { name="DiscreteLaplace"; version="1.1.1"; sha256="17w4vjvsm7jacvwckjczyah3hglq044r3m6vqdcrg8haz884rav2"; depends=[]; }; @@ -903,7 +927,7 @@ in with self; { DoEstRare = derive2 { name="DoEstRare"; version="0.2"; sha256="0y9ymw7114jk1rwiasq400bpgvkxv6rpc954c7v9mgxd3c2nfza7"; depends=[]; }; DoTC = derive2 { name="DoTC"; version="0.2"; sha256="1hjjkmxrbiysy3xl6n4q7kxcygdq68jcsgki1p937zj9a17sa62j"; depends=[ggplot2 plyr]; }; Dodge = derive2 { name="Dodge"; version="0.8"; sha256="1vnvqb2qvl6c13s48pyfn1g6yfhc60ql3vn7yh2zymxcsr1gxgcw"; depends=[]; }; - Dominance = derive2 { name="Dominance"; version="1.0.17"; sha256="07xsyadmq47szvp1vnf53ijq43pwd9g7554fgl803fhkwq6b3jgh"; depends=[chron gdata igraph XLConnect]; }; + Dominance = derive2 { name="Dominance"; version="1.1.0"; sha256="1dzfj79hv3ds72dy4fn14bp68fiw06vdxkp4dvyvj37yrrqpcxyz"; depends=[chron gdata igraph XLConnect]; }; DoseFinding = derive2 { name="DoseFinding"; version="0.9-16"; sha256="0ncr95lf4mifmx6n2qkg8m3cn326zj9w4hr7afsdxg155l11w89z"; depends=[lattice mvtnorm]; }; DoubleCone = derive2 { name="DoubleCone"; version="1.1"; sha256="1kbvsj93nn2306s6pgqiiznmlcn2nqsgcxinihl613ivczxhzpqg"; depends=[coneproj MASS Matrix]; }; DoubleExpSeq = derive2 { name="DoubleExpSeq"; version="1.1"; sha256="00xpj5xmpgmvp6h76imkmghrnlfk6c50ydvv0jram6m6ix3z8323"; depends=[numDeriv]; }; @@ -911,6 +935,7 @@ in with self; { Dpit = derive2 { name="Dpit"; version="1.0"; sha256="02pnc00sk3bwxmxrg27638x0q62r7nsx2nr14zjjc5q880prdisv"; depends=[fitdistrplus gsl moments VGAM]; }; DrBats = derive2 { name="DrBats"; version="0.1.4"; sha256="0jzl1jklxsbqf5hv3a71lckk51jxi1lnbk5zmvd4x3y9b9azl2cq"; depends=[ade4 coda MASS Matrix rstan sde]; }; DrImpute = derive2 { name="DrImpute"; version="1.0"; sha256="1adzarrwqb282pqgx2yqswp9rpwd1naxsmar54kddr6qyd6b923b"; depends=[Rcpp RcppArmadillo]; }; + DrInsight = derive2 { name="DrInsight"; version="0.1.1"; sha256="02lqf6bwbgcgyg5zx16nvnzpagmcmbsngnhmyv47256vsd9vppjd"; depends=[igraph qusage]; }; DrillR = derive2 { name="DrillR"; version="0.1"; sha256="0n7pim5kk0wfdjcc67v4vvdb7wyhn5bcgi2a12nbyfyydss7pk1g"; depends=[httr]; }; DrugClust = derive2 { name="DrugClust"; version="0.2"; sha256="0acvjqwzkbjmy101m501l7fkfxzkp6zflwvn56li5307xv9ggnfg"; depends=[cclust cluster e1071 MESS ROCR]; }; DstarM = derive2 { name="DstarM"; version="0.2.2"; sha256="014xlj5kipl2jpcgcqs1ynw05x17wbsgc5mhfjn3p96bbp6pkzzy"; depends=[DEoptim ggplot2 rtdists RWiener]; }; @@ -921,6 +946,7 @@ in with self; { DynNom = derive2 { name="DynNom"; version="4.1.1"; sha256="1c4hykp8fwr6h5y09m4qs23bmbaj6im2c833mv2ymlhy5bwhmnfi"; depends=[BBmisc compare ggplot2 plotly rms shiny stargazer survival]; }; DynTxRegime = derive2 { name="DynTxRegime"; version="3.2"; sha256="0a6s28vc7kf6r7qmy9xjmxm39fl0ijnbl01d8rzr4w9sbnr3n85l"; depends=[dfoptim kernlab modelObj rgenoud]; }; DynamicDistribution = derive2 { name="DynamicDistribution"; version="1.1"; sha256="1s78hpj2pxjs4vixin1i816qjbn3wk7b8rd2zdjp4d4rbxifcqf5"; depends=[]; }; + DynamicGP = derive2 { name="DynamicGP"; version="1.0-2"; sha256="1mgipnkf8mlxcr9b6naiy5nq90war1gdp2cm54681b4cx0fv62p2"; depends=[laGP lhs]; }; EAinference = derive2 { name="EAinference"; version="0.2.3"; sha256="1kzcfya3z6rf1vqjn72yjymdhrn4dzgmwifh3w6k22cy5jxffzn4"; depends=[hdi limSolve MASS msm mvtnorm Rcpp RcppArmadillo]; }; EBASS = derive2 { name="EBASS"; version="0.1"; sha256="14hxzj06wrc4ihflr7dqk28fsjwbcizr0jy54vhv0mk1y1gd4201"; depends=[]; }; EBEN = derive2 { name="EBEN"; version="4.6"; sha256="0gcf5b2viiq69vs8bd8nhk65g9sbzgg212w7zpnz4y6cv9jkk5zz"; depends=[]; }; @@ -961,6 +987,7 @@ in with self; { EML = derive2 { name="EML"; version="1.0.3"; sha256="04qz4rwq0amy9lp6358qjjql46ky2slqrvipngym5klqvm9vi0zi"; depends=[uuid xml2]; }; EMMAgeo = derive2 { name="EMMAgeo"; version="0.9.4"; sha256="1i36s8mzp04alff6lqkc798xjzgn61wdpl5i0awjdvg26ka8v7lj"; depends=[GPArotation limSolve shape shiny]; }; EMMIXcskew = derive2 { name="EMMIXcskew"; version="0.9-5"; sha256="1ys5kvns6jlw2lk9m6xcy71wx1d581cmphiaxnp3hsqimc8wz7hq"; depends=[MASS mnormt rgl]; }; + EMMIXgene = derive2 { name="EMMIXgene"; version="0.1.0"; sha256="1jadasvngxczyyc7gxpcw3jxhxai3p88l8lmj1jmdns5vdi2n4rl"; depends=[BH ggplot2 mclust Rcpp RcppArmadillo reshape scales]; }; EMMIXskew = derive2 { name="EMMIXskew"; version="1.0.3"; sha256="05y1ivbzbsfab90925l3ahzd3b8y5kjfk3f0p2s9s3sfyxphqah7"; depends=[KernSmooth lattice mvtnorm]; }; EMMIXuskew = derive2 { name="EMMIXuskew"; version="0.11-6"; sha256="0japf0l0sj84jna7b5kirp6pgqa4c923ldwphb16ch2xxrgk5n5k"; depends=[MASS]; }; EMMLi = derive2 { name="EMMLi"; version="0.0.3"; sha256="1b36kyzvrdljmkysggv8jyaip78pj32ms0xhj2y568hd419lkh2p"; depends=[]; }; @@ -977,6 +1004,7 @@ in with self; { EQL = derive2 { name="EQL"; version="1.0-0"; sha256="0lxfiizkvsfls1km1zr9v980191af6qjrxwcqsa2n6ygzcb17dp5"; depends=[lattice ttutils]; }; EQUIVNONINF = derive2 { name="EQUIVNONINF"; version="1.0"; sha256="103wrry0cmikprihmgx8y4kk1pnbjis7rs1xw13w14v902xkr2rq"; depends=[BiasedUrn]; }; ERP = derive2 { name="ERP"; version="1.1"; sha256="00w9zz5rp1asvk13sj9gkd14n2akbclsyz26jp5a3r85fh6chdm0"; depends=[fdrtool mnormt]; }; + ERSA = derive2 { name="ERSA"; version="0.1.0"; sha256="063i9fmdccyrbap7fgas9371zv13gpcgzhlsphsn8jw9nmzpdii4"; depends=[broom car combinat dplyr ggplot2 leaps modelr purrr RColorBrewer shiny tidyr]; }; ES = derive2 { name="ES"; version="1.0"; sha256="1rapwf6kryr6allzbjk6wmxpj9idd3xlnh87rwbh6196xb7rp8lv"; depends=[]; }; ESEA = derive2 { name="ESEA"; version="1.0"; sha256="06r5lki32mxkznj6yxvlz0ikqcxm3jbaralv4qp9xrw6dy6yyg27"; depends=[igraph parmigene XML]; }; ESG = derive2 { name="ESG"; version="0.1"; sha256="1jw6239asv6lwxrz5v0r5pzg6v500bqxg8361sh4jj67rsrc7g9m"; depends=[]; }; @@ -986,7 +1014,7 @@ in with self; { ETAS = derive2 { name="ETAS"; version="0.4.4"; sha256="0s0j7r1nyf82qz3lavsvyd11hl0jkq69c70wh00nfy93n2ygp376"; depends=[fields goftest lattice maps Rcpp spatstat]; }; ETC = derive2 { name="ETC"; version="1.3"; sha256="1nvb9n0my7h1kq996mk91canxi6vxy3mzhrshrvm13ixvl48lkkh"; depends=[mvtnorm]; }; ETLUtils = derive2 { name="ETLUtils"; version="1.4.1"; sha256="07wqrg7mnxmbdf2ibxj5kppl4sd3l608yfhbbsngkhpsrm203qva"; depends=[bit ff]; }; - EValue = derive2 { name="EValue"; version="1.1.1"; sha256="0fdihngqgl2m7385ih08zzh9y38aal1d9lv7358qf0z68i9bgfa2"; depends=[ggplot2 metafor]; }; + EValue = derive2 { name="EValue"; version="1.1.3"; sha256="0c3fsb3p277533gn6yw8ml7d6za211j8k46ga88fsh4mlg28hb6p"; depends=[ggplot2 metafor]; }; EW = derive2 { name="EW"; version="1.1"; sha256="0wc3v9qisiikvlp28xhlgsxb92fhkm6vslia6d0vpihyai0p1h1g"; depends=[]; }; EWGoF = derive2 { name="EWGoF"; version="2.2.1"; sha256="0n1fx6k9ndb2s9ybzizbqz662c9s1f48q6v697pqhnfy9si1nplz"; depends=[Rcpp]; }; EXRQ = derive2 { name="EXRQ"; version="1.0"; sha256="1iqsr52sl2j5q03122a7rsp6n6a2bkysk2r908c89l36gk4sj2i5"; depends=[mnormt quantreg]; }; @@ -1002,6 +1030,7 @@ in with self; { EcoGenetics = derive2 { name="EcoGenetics"; version="1.2.1-4"; sha256="18l5v7zsmz35brnf6b8qfxbs8906rmyc2kkh9bm96x01m3vx8pkh"; depends=[d3heatmap edgebundleR ggplot2 htmlwidgets igraph jsonlite magrittr networkD3 party pheatmap plotly raster reshape2 rgdal rkt SoDA sp]; }; EcoHydRology = derive2 { name="EcoHydRology"; version="0.4.12"; sha256="03dzdw79s0cnnd7mv6wfxw374yf66dlcmj10xh6sh5i352697xp1"; depends=[DEoptim operators topmodel XML]; }; EcoIndR = derive2 { name="EcoIndR"; version="1.2"; sha256="1p2m4kramcf71xlm9hbk5l5mb8nmjfac1p3csai7m2gmikf559yj"; depends=[]; }; + EcoNetGen = derive2 { name="EcoNetGen"; version="0.1.1"; sha256="004y0l8hdl1kmph7y954m8k3rrqfgi6krdwywww136q0yfjdw27v"; depends=[ggplot2 igraph]; }; EcoSimR = derive2 { name="EcoSimR"; version="0.1.0"; sha256="13ni3vdfahqjyb9xrv7fmnbj5m5n3jwfh1bl9r0bvhi5w72kb7rj"; depends=[MASS]; }; EcoTroph = derive2 { name="EcoTroph"; version="1.6"; sha256="0zi6g0ra107s47r32mm9h6r1wll3avi0mpjmhcr0nj9y48nv14w3"; depends=[XML]; }; EcoVirtual = derive2 { name="EcoVirtual"; version="1.0"; sha256="1adhxwi22psr81xh1szjvn6ycv4zw31xjnswk65iazk3sc4vz7wc"; depends=[]; }; @@ -1010,8 +1039,8 @@ in with self; { EdSurvey = derive2 { name="EdSurvey"; version="1.0.6"; sha256="1p8cxr69ckz6py0hmagm9aq7kp1q48ymffmnpwsvwh2yfkzl90yq"; depends=[data_table LaF lfactors Matrix NAEPprimer wCorr]; }; EditImputeCont = derive2 { name="EditImputeCont"; version="1.1.0"; sha256="1pbpknz1v5k7fgwvzv5ldyxxshys4sx7d17hbwzph1z68jcmixzg"; depends=[editrules igraph Rcpp]; }; EffectLiteR = derive2 { name="EffectLiteR"; version="0.4-2"; sha256="1vkg5gi0gysnw0gz9ah8pdnnlkdfsz0jy53ps2jnnpy8lbr45zc9"; depends=[car foreign ggplot2 lavaan lavaan_survey nnet shiny survey]; }; - EffectStars = derive2 { name="EffectStars"; version="1.8"; sha256="0gcgwlywx7slbk8nyzv47r4wx837gimmshrb1kl2m4cl4xbm84jh"; depends=[VGAM]; }; - EffectStars2 = derive2 { name="EffectStars2"; version="0.1-1"; sha256="1yffwnr563vzdq0ph9xs3w0zg5c7l3ima6skn8cqiafr21w332ss"; depends=[miscTools VGAM]; }; + EffectStars = derive2 { name="EffectStars"; version="1.9"; sha256="15n5mrba2s0qxcg3zikfwpxqwv38h39zmvj8sz62ni4pdhrhhjh3"; depends=[VGAM]; }; + EffectStars2 = derive2 { name="EffectStars2"; version="0.1-2"; sha256="0121zb627zwkgbb84sn2dclph56dc5rkfjpci5xwd0w99vh3q66l"; depends=[miscTools VGAM]; }; EffectTreat = derive2 { name="EffectTreat"; version="0.3"; sha256="1y8b1867idjbd7i39hhryg4nyijlv6d828z0jspp80fka3sp8xpw"; depends=[]; }; EffectsRelBaseline = derive2 { name="EffectsRelBaseline"; version="0.5"; sha256="1dsnakcrgmlx44599ii92wvhxbxrh0hij59709wsskx1x1152zvh"; depends=[]; }; EfficientMaxEigenpair = derive2 { name="EfficientMaxEigenpair"; version="0.1.4"; sha256="1s0i9a2vk2g4f5gadsvzjfkw91hcjsrbyjg2vgnj1v17xrwgp40w"; depends=[]; }; @@ -1044,8 +1073,8 @@ in with self; { EpiDynamics = derive2 { name="EpiDynamics"; version="0.3.0"; sha256="0hpysjl8wfgylbp4ddxmi5msvlp1w70c6pxggc2bwdgap3s127f3"; depends=[deSolve ggplot2 reshape2]; }; EpiEstim = derive2 { name="EpiEstim"; version="1.1-2"; sha256="0r56iglhkrqvlsf3gbahd544h944fmbyn6jdc113rhjscf6dl605"; depends=[]; }; EpiILM = derive2 { name="EpiILM"; version="1.4.2"; sha256="16vml2p7c4nv0lfis661x7b9wimrni1ncpa256dh99cps9508j28"; depends=[coda]; }; - EpiILMCT = derive2 { name="EpiILMCT"; version="1.0"; sha256="1s7f4g1d44mqp475z5cn97dqv6b1caxmfq1p6gr1w7jvgq0dfqp5"; depends=[]; }; - EpiModel = derive2 { name="EpiModel"; version="1.6.1"; sha256="0jmwrpcfrfwrw5zwvwl0cv961nvqfvxjggx93iyc8z8bd6mf1wba"; depends=[ape deSolve doParallel ergm foreach ggplot2 lazyeval network networkDynamic RColorBrewer tergm]; }; + EpiILMCT = derive2 { name="EpiILMCT"; version="1.1.2"; sha256="1rxq9z5lhcgzn02d9k6vgl2cb5x0s9gsly63byx4gg1h91bsvmp6"; depends=[coda]; }; + EpiModel = derive2 { name="EpiModel"; version="1.6.5"; sha256="1h9490x7vna8z2dib6vgkxhpqvbybg655k88jn48i6qkda8dzv54"; depends=[ape deSolve doParallel ergm foreach ggplot2 lazyeval network networkDynamic RColorBrewer tergm]; }; EpiStats = derive2 { name="EpiStats"; version="1.0"; sha256="17i8i3v8qpwas4h6g8sbdl42syg20fm22c7p1bnv4nzx28p9yzhy"; depends=[dplyr epiR]; }; EpiWeek = derive2 { name="EpiWeek"; version="1.1"; sha256="19bvjiiz8qn9nlvf3nq238qi1hszlm6asrc03p8ykp6gpl2pi6js"; depends=[]; }; EpistemicGameTheory = derive2 { name="EpistemicGameTheory"; version="0.1.2"; sha256="0b2gnrvhlsw85qv63ib32pj55l7w63wgvbrj5rb209g6h46fby8m"; depends=[lpSolve]; }; @@ -1054,7 +1083,7 @@ in with self; { EstHer = derive2 { name="EstHer"; version="1.0"; sha256="1j8sczwfzil16j85mw5d1c7cxy7wimh0qq7zhmkh7mfnr36m9phr"; depends=[glmnet MASS Rcpp RcppArmadillo]; }; EstSimPDMP = derive2 { name="EstSimPDMP"; version="1.2"; sha256="05gp0gdix4d98111sky8y88p33qr5w4vffkp6mg9klggn37kdj8j"; depends=[]; }; EstimateGroupNetwork = derive2 { name="EstimateGroupNetwork"; version="0.1.2"; sha256="148srhlpzh0scvnkjbkyia1pr8a2ridabm3dahw4zn7p3cryiyb1"; depends=[igraph qgraph]; }; - EthSEQ = derive2 { name="EthSEQ"; version="2.1.1"; sha256="10i2cwrsgi6q5fq9ksjrhrdwg6hjjd284xsjdiwlfcbfa59390dc"; depends=[data_table gdsfmt geometry MASS plot3D SNPRelate]; }; + EthSEQ = derive2 { name="EthSEQ"; version="2.1.2"; sha256="0w75d8kw1bf4mfgk8rrx6vzq002z2588kxgadyfag0vk9s4akxi3"; depends=[data_table gdsfmt geometry MASS plot3D SNPRelate]; }; EurosarcBayes = derive2 { name="EurosarcBayes"; version="1.1"; sha256="12311s6ibw9q6kykhh689r93r7mwjhwrhkzdpc75grvw6ilgjmpm"; depends=[clinfun data_table plyr shiny VGAM]; }; EvCombR = derive2 { name="EvCombR"; version="0.1-2"; sha256="1f5idjaza91npf64hvcnpgnr72mpb7y6kf91dp57xy9m14k7jx5g"; depends=[]; }; EvalEst = derive2 { name="EvalEst"; version="2015.4-2"; sha256="1jkis39iz3zvi5yfd0arvw7bym6naq45f5cravywg8c37n9v967x"; depends=[dse setRNG tfplot tframe]; }; @@ -1105,7 +1134,7 @@ in with self; { FGN = derive2 { name="FGN"; version="2.0-12"; sha256="0jxawb4wm1vcp0131mdnc0r24dw8sd29ih0fc2wh6ahy7mxzajqn"; depends=[akima ltsa]; }; FGSG = derive2 { name="FGSG"; version="1.0.2"; sha256="1r3sjhzf9gcnbcx6rqr1s555z8lcwm3fxl096md2jji336ijlk79"; depends=[]; }; FGalgorithm = derive2 { name="FGalgorithm"; version="1.0"; sha256="1dq6yyb3l6c9fzvk9gs6pb240xb5hvc6fh8p3qd3c91b3m289mcc"; depends=[]; }; - FHDI = derive2 { name="FHDI"; version="1.2.1"; sha256="12vw8l0jk2z3i9gz108l2wrha6psqrg508rv1d44r4fss3xa233l"; depends=[]; }; + FHDI = derive2 { name="FHDI"; version="1.2.3"; sha256="19480lp2hp0ss2mij1z2ikhdqlkxrfpyy66sz5i0jab48675l9v5"; depends=[]; }; FHtest = derive2 { name="FHtest"; version="1.4"; sha256="1wsn0j9ydpp9nfswiqg21p09kgkvaq8fh0y0h8syqgizah7i8vs2"; depends=[interval KMsurv MASS perm survival]; }; FI = derive2 { name="FI"; version="1.0"; sha256="17qzl8qvxklpqrzsmvw4wq3lyqz3zkidr7ihxc4vdzmmz69pyh2f"; depends=[]; }; FIACH = derive2 { name="FIACH"; version="0.1.2"; sha256="151lc5m8pb7l07kxljm32zy5kd7a4zr5vgsgwsx7ywhijh0r0585"; depends=[Rcpp RcppArmadillo RNiftyReg tkrplot]; }; @@ -1132,9 +1161,9 @@ in with self; { FREQ = derive2 { name="FREQ"; version="1.0"; sha256="01nra30pbnqdd63pa87lcws3hnhhzybcjvx2jqyxjghn6khz47j0"; depends=[]; }; FRESA_CAD = derive2 { name="FRESA.CAD"; version="3.0.1"; sha256="05hcds1g1hkpr3fww1i462p633xlhwv594fpbphvw8fm10mc0hns"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; }; FREddyPro = derive2 { name="FREddyPro"; version="1.0"; sha256="0h2rdydcx9pwjl1zxghzb5vqynrwdkscyq6c9adjgz4dngfwyzsw"; depends=[dismo ggplot2 lubridate raster RColorBrewer sp]; }; - FRK = derive2 { name="FRK"; version="0.1.8"; sha256="037rk9l9bl65wskrii07x4z0g0ic92fx7i0p522bgy53qxa3sbq0"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime]; }; + FRK = derive2 { name="FRK"; version="0.2.1"; sha256="042j6n3yx46123d0qsghbynjf1h0iri4kfd92z5nbcgv7wggk4d3"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime sparseinv]; }; FRegSigCom = derive2 { name="FRegSigCom"; version="0.1.0"; sha256="02lvgxxr12rfs4k7dg3rl249nbvfkqaywas3k6jhm378j3j8yaaf"; depends=[fda]; }; - FSA = derive2 { name="FSA"; version="0.8.17"; sha256="1mpkbz5q4xbncmwqrylww679ghz52fsr81flavkksb8ljr4z6f7p"; depends=[car dplyr dunn_test epitools gplots lmtest plotrix plyr sciplot]; }; + FSA = derive2 { name="FSA"; version="0.8.19"; sha256="0sj928r3dx320q3684ckw8yny6s209n57j0sxdzk7bwl9syyp6ma"; depends=[car dplyr dunn_test epitools gplots lmtest plotrix plyr sciplot]; }; FSAdata = derive2 { name="FSAdata"; version="0.3.6"; sha256="0r4g3s4a7hizxj7zlp8wb5sldnx6kc99vak8ww715bhzpzq40qf8"; depends=[]; }; FSInteract = derive2 { name="FSInteract"; version="0.1.2"; sha256="1aci1398aaz0nrl5jy6yh7xik355wf7pwngrsak4qsi94vdj05iy"; depends=[Matrix Rcpp]; }; FSTpackage = derive2 { name="FSTpackage"; version="0.1"; sha256="1fjqsl59fg4x9vkbv4b0qmfxlaa2q3rzpl40grv24yg6ixfagmdb"; depends=[CompQuadForm MASS Matrix mvtnorm SKAT]; }; @@ -1149,14 +1178,14 @@ in with self; { FactMixtAnalysis = derive2 { name="FactMixtAnalysis"; version="1.0"; sha256="1l4wfp39b7g38vdk6jpd5zq08sjhsg0s71f662aca2rj6l3a2x3r"; depends=[MASS mvtnorm]; }; FactoClass = derive2 { name="FactoClass"; version="1.2.4"; sha256="0rzbzl32hk4mrs6njm4cnj84ifsf52ms5khy43m9bfmwwmadbilr"; depends=[ade4 ggplot2 ggrepel KernSmooth scatterplot3d xtable]; }; FactoInvestigate = derive2 { name="FactoInvestigate"; version="1.1"; sha256="09fnlqwnijg94yfm3q41pdck9yxaq037m7421g4hdxaigljjb6ml"; depends=[FactoMineR rmarkdown rrcov]; }; - FactoMineR = derive2 { name="FactoMineR"; version="1.39"; sha256="12m0yi4w3iw07gx8viwvy8v8l1qh3qr7ghv39cdb2g0zgmnivfxh"; depends=[car cluster ellipse flashClust lattice leaps MASS scatterplot3d]; }; + FactoMineR = derive2 { name="FactoMineR"; version="1.40"; sha256="1s4mdmxp66ipnbqwzs1s2fyyr8vzbrxamr2sd9k5a6sqwy7pgjv8"; depends=[car cluster ellipse flashClust lattice leaps MASS scatterplot3d]; }; FactorsR = derive2 { name="FactorsR"; version="1.2"; sha256="0y6r5ch0h0sag1xinvnjr7q4495naygvi5iiqq9bc51ijv228c0m"; depends=[]; }; Factoshiny = derive2 { name="Factoshiny"; version="1.0.6"; sha256="1rb16g4gqq9mmwgpp94j9g5iv5p1psjqllsp9qn7ccccmgn6nnw9"; depends=[colourpicker FactoMineR shiny]; }; Fahrmeir = derive2 { name="Fahrmeir"; version="2016.5.31"; sha256="16fbc1zb9x9p04bl7y5nd375pha6bd3hfqqchlk1bqxrj4879y5g"; depends=[]; }; FamEvent = derive2 { name="FamEvent"; version="1.3"; sha256="0jf4ph9mskycyckyg9biy0h1zk5q6nvj8669zfh8nfnnn2yh3s48"; depends=[kinship2 MASS survival truncnorm]; }; Familias = derive2 { name="Familias"; version="2.4"; sha256="1k6ig2zfkr1a4s3s85ygixmmsrb5m8vqqab8l5ffkspgjvh4dfz2"; depends=[kinship2 paramlink Rsolnp]; }; - FarmSelect = derive2 { name="FarmSelect"; version="1.0.1"; sha256="1qpa46igan3dqgn4ny2lmj08y6jk7krp7pb27afi694nw5l3l97h"; depends=[glmnet ncvreg Rcpp RcppArmadillo]; }; - FarmTest = derive2 { name="FarmTest"; version="1.0.1"; sha256="0h829706ilq2czjnn48wpwb09ryx0nwbl953m6p6z1wp4a3dzcv4"; depends=[Rcpp RcppArmadillo]; }; + FarmSelect = derive2 { name="FarmSelect"; version="1.0.2"; sha256="174rzv9k0hdcfdkv7bisy70rip2iy0bnj3qa54i00wqwjdglgjdn"; depends=[fBasics ncvreg Rcpp RcppArmadillo]; }; + FarmTest = derive2 { name="FarmTest"; version="1.0.2"; sha256="1khf2l1rza1kayqrfxf17l365x1ckqs8wnqihqdq9l1jz77p7a7n"; depends=[Rcpp RcppArmadillo]; }; FastBandChol = derive2 { name="FastBandChol"; version="0.1.1"; sha256="1hlgipn792vaylvc0r44clkjcnkns6p241a1fs8sb3gpq81naazk"; depends=[Rcpp RcppArmadillo]; }; FastGP = derive2 { name="FastGP"; version="1.2"; sha256="120qai1yw3yhwm762zridk78n4qclpivwm9f2hkij4bz851qibqv"; depends=[MASS mvtnorm rbenchmark Rcpp RcppEigen]; }; FastHCS = derive2 { name="FastHCS"; version="0.0.5"; sha256="02ds9syqh8wpjrqibdv3kqxcyijclm572daqrj262b4b6211v46x"; depends=[matrixStats Rcpp RcppEigen robustbase]; }; @@ -1168,10 +1197,10 @@ in with self; { FastRWeb = derive2 { name="FastRWeb"; version="1.1-1"; sha256="0xh3710kvnc60pz9rl5m3ym2cxf0mag9gi29y7j3fl4dh2k7zf74"; depends=[base64enc Cairo]; }; FastSF = derive2 { name="FastSF"; version="0.1.1"; sha256="1xajav45h57hchzkvl2pb4mz9xy433lq74jnry0icid8dai5xhwb"; depends=[limSolve Rcpp RcppArmadillo]; }; FatTailsR = derive2 { name="FatTailsR"; version="1.7-5"; sha256="1l2anaf4kixidmvya64ni5b78bl9w2n6xf1lnf297lkdka8gxigw"; depends=[minpack_lm timeSeries]; }; - FateID = derive2 { name="FateID"; version="0.1.0"; sha256="0q2pq5w93n2zh0qz96b33pc9bbjfp1dqzsi1kcizi468a7jgkfmx"; depends=[caTools DESeq2 destiny lle locfit pheatmap princurve randomForest RColorBrewer rgl Rtsne som]; }; + FateID = derive2 { name="FateID"; version="0.1.1"; sha256="1v861cfzbrva43b9w2qa9pb9xbrjj91wqcf4m5nvq5via55i14b4"; depends=[caTools DESeq2 destiny lle locfit pheatmap princurve randomForest RColorBrewer rgl Rtsne som]; }; FeaLect = derive2 { name="FeaLect"; version="1.10"; sha256="1r7rgcadrqjhxn2g2w16axygsck82fprxg7l14ai11bn4b7h4pmb"; depends=[lars rms]; }; - FeatureHashing = derive2 { name="FeatureHashing"; version="0.9.1.1"; sha256="1y46bk2yddq0n8p1kj6fwi9q23lsblsrlgf7b630vcbvv8mpz5x2"; depends=[BH digest magrittr Matrix Rcpp]; }; - FedData = derive2 { name="FedData"; version="2.5.1"; sha256="1yvmy7y26rqrxqap8nicdfrh3s66nyrcn5lvasnairaz1fvx5qxs"; depends=[curl data_table devtools dplyr foreach Hmisc igraph lubridate magrittr ncdf4 raster readr rgdal rgeos soilDB sp stringr]; }; + FeatureHashing = derive2 { name="FeatureHashing"; version="0.9.1.3"; sha256="0k8n3c0yiz6bb9rq6ra8z2hypb4hw4qcsdfbrgrw74kqivscs62i"; depends=[BH digest magrittr Matrix Rcpp]; }; + FedData = derive2 { name="FedData"; version="2.5.2"; sha256="0lr6q9j8rnjkn5vvk7z4irsxfhkzhi1s36pp5j8175dak240415h"; depends=[curl data_table devtools dplyr foreach Hmisc igraph lubridate magrittr ncdf4 raster readr rgdal rgeos sf soilDB sp stringr]; }; FeedbackTS = derive2 { name="FeedbackTS"; version="1.4"; sha256="1mcsr48hvrpfnk2f0z1bc8556jf848bpd8prm3y46gqdj452wpmm"; depends=[geoR mapdata maps proj4 sp]; }; Fgmutils = derive2 { name="Fgmutils"; version="0.9.4"; sha256="0k5pafgrcb7smklgzgw2mf6npj55nm5fsr6k0xp6ji380rvdxc0y"; depends=[data_table devEMF ggplot2 gridExtra plyr png ReporteRs sqldf stringr]; }; FieldSim = derive2 { name="FieldSim"; version="3.2.1"; sha256="1snz2wja3lsgxys0mdlrjjvk5575cyd64mjipafibwcs97bva5x1"; depends=[RColorBrewer rgl]; }; @@ -1182,7 +1211,7 @@ in with self; { FinancialInstrument = derive2 { name="FinancialInstrument"; version="1.3.1"; sha256="0f1zaclrcmpkdhcfc8a09f7lsf2b7gfyd7js3173qckn84a01f3w"; depends=[quantmod TTR xts zoo]; }; FinancialMath = derive2 { name="FinancialMath"; version="0.1.1"; sha256="11nhphvd7bvbc7xfs85rib763r1mpvxmsj6hgzfib5aifib5k5js"; depends=[]; }; FindAllRoots = derive2 { name="FindAllRoots"; version="1.0"; sha256="0n4wfm21qj5zn06jqnzxa0w9mfn18dqi6hk1jjqa56dxqw1k7vw0"; depends=[]; }; - FindIt = derive2 { name="FindIt"; version="1.1.3"; sha256="1d4cvd4651fdbwmj83q2x9vwvg92fbmq8112z7ian8n96n30rchd"; depends=[arm ggplot2 glinternet glmnet igraph lars lmtest Matrix quadprog sandwich]; }; + FindIt = derive2 { name="FindIt"; version="1.1.4"; sha256="1rnkxngkqsmqs0d0m8ihscpsigxbjgl5ga5nyfwf97b1hrbv4j37"; depends=[arm ggplot2 glinternet glmnet igraph lars lmtest Matrix quadprog sandwich]; }; FindMinIC = derive2 { name="FindMinIC"; version="1.6"; sha256="0vlr56nw32msvz8bljrw82nzrnazncs6nz7zisidffm2v3najkar"; depends=[nlme sets]; }; FinePop = derive2 { name="FinePop"; version="1.4.1"; sha256="06wabgrxfq11ncbll5d0f07kkh23w2hrvjx8k1vy55q9f1dwd3sb"; depends=[]; }; FisHiCal = derive2 { name="FisHiCal"; version="1.1"; sha256="1dds629jlja3vw2l010n1334yh3z10nijqksr0q98ckd2yrwg2rf"; depends=[igraph Rcpp RcppArmadillo]; }; @@ -1191,7 +1220,7 @@ in with self; { FitAR = derive2 { name="FitAR"; version="1.94"; sha256="1mkk3kvfq4v0pdabnhbwrk31ji2mv2v6ns16xsvvr1qyg2fnx6hq"; depends=[bestglm lattice leaps ltsa]; }; FitARMA = derive2 { name="FitARMA"; version="1.6"; sha256="1r9mqrqkm4wh3nd6v9wmpj23gw21i4p89p6z4c7639kn4f590ldk"; depends=[FitAR]; }; FixSeqMTP = derive2 { name="FixSeqMTP"; version="0.1.2"; sha256="0v1cwq8gapgandm7wiw8p6av6qigydlpmwi6w02p1y7f0hf5ifnp"; depends=[]; }; - FixedPoint = derive2 { name="FixedPoint"; version="0.2"; sha256="1gmh9ipv010q4lgpnka1rwfza5c7llgjpn7yvcsvlxglmplh8969"; depends=[MASS]; }; + FixedPoint = derive2 { name="FixedPoint"; version="0.4"; sha256="07qhvaw4abd039dxlcfm5126lv6p5ybbw78qcmi4x51hvq6icals"; depends=[MASS]; }; FlexDir = derive2 { name="FlexDir"; version="1.0"; sha256="1gb5alv9jsnw0135g63cy757pxhdw6cgwfm8dpcm8dj9zqg10dkm"; depends=[]; }; FlexGAM = derive2 { name="FlexGAM"; version="0.7.0"; sha256="1pjlsi747j347vwn94391xr3aknnspgw7rc1jnin7g0n1fgkcww4"; depends=[MASS Matrix mgcv scam]; }; FlexParamCurve = derive2 { name="FlexParamCurve"; version="1.5-3"; sha256="0766ghwbdd7r4yj5xf31hnknn775ziw1hhrn13wf8bibyd8blz70"; depends=[nlme]; }; @@ -1204,7 +1233,7 @@ in with self; { ForecastComb = derive2 { name="ForecastComb"; version="1.1"; sha256="1ki769m3cw3kb8jhbrgiwssspszsipmg2hlbk4ifldi8s19l9m12"; depends=[forecast ggplot2 Matrix mtsdi psych quadprog quantreg]; }; ForecastCombinations = derive2 { name="ForecastCombinations"; version="1.1"; sha256="07vzgm2jy992p1l9b8rsv2lbc8cbfzvql85n5ah4p4l3zjxdxgk9"; depends=[quadprog quantreg]; }; ForecastFramework = derive2 { name="ForecastFramework"; version="0.9.0"; sha256="131h9f148wn89znzsnym43amlvf4s7jzg4f2p7ld9ns7727sf56q"; depends=[abind dplyr lubridate magrittr R6 reshape2]; }; - ForestTools = derive2 { name="ForestTools"; version="0.1.5"; sha256="0yjyc5i2jhagvwpzg420zhhygs966ncjn9aggh4gd4zdsi0nzqcx"; depends=[APfun imager raster rgeos sp TileManager]; }; + ForestTools = derive2 { name="ForestTools"; version="0.2.0"; sha256="0q9nk9n001bnz5hd8cxj6wmaf8c7g0kwfkpa0hk6ap42666rrrah"; depends=[APfun imager raster rgeos sp]; }; FormalSeries = derive2 { name="FormalSeries"; version="1.0"; sha256="09m4ifinasww0xfprs29xsrqhxxkw9zffb3919xnkkjkwp0nax4v"; depends=[]; }; Formula = derive2 { name="Formula"; version="1.2-2"; sha256="0ad49bzip1zqmpj1d8jajwl4bd81fm3k6dq8p26x6mvlzc04dvwd"; depends=[]; }; ForwardSearch = derive2 { name="ForwardSearch"; version="1.0"; sha256="0yd47832piqxzjxgl7bc8pn0c8f7vbgsm9z6894rzyi615kjl70b"; depends=[robustbase]; }; @@ -1242,7 +1271,7 @@ in with self; { GADMTools = derive2 { name="GADMTools"; version="2.1-1"; sha256="1xlr3qa6li3izms51mf3g35hj0gximvgibx6d821ikxzp6892mha"; depends=[classInt dplyr ggmap ggplot2 gridExtra jsonlite lattice maptools RColorBrewer rgdal rgeos scales sp stringr]; }; GAIPE = derive2 { name="GAIPE"; version="1.0"; sha256="04iarbwxrhn48bk329wxis7ifzndi67kpjx6dcakawkh3g2mzsfz"; depends=[]; }; GAMBoost = derive2 { name="GAMBoost"; version="1.2-3"; sha256="0450h9zf12r524lxk1lrv9imvvkk6fmyd3chnxp18nnvys7215pv"; depends=[Matrix]; }; - GAMens = derive2 { name="GAMens"; version="1.2"; sha256="1x1q6a5p2lsx0gbfm976ps4braqaxa26ii6g3iag9ssafyhb0r1f"; depends=[caTools gam mlbench]; }; + GAMens = derive2 { name="GAMens"; version="1.2.1"; sha256="1z10wxcg277fra2lch464l0kb02lspw9qr1i2wmq11wcz0k9qnl8"; depends=[caTools gam mlbench]; }; GANPA = derive2 { name="GANPA"; version="1.0"; sha256="0ia8djv46jm397nxjrm9yc5gacf1r4z0ckiliz57cbrqwh7z2wpa"; depends=[GANPAdata]; }; GANPAdata = derive2 { name="GANPAdata"; version="1.0"; sha256="0mhdadl7zgsacn59ym42magg3214k1xhabwn78fv7kgccszcgc86"; depends=[]; }; GAR = derive2 { name="GAR"; version="1.1"; sha256="12xgk87bndinx7ibaasn51a9fad3ymvpjmixa7l18pfy99l3pcll"; depends=[httr jsonlite]; }; @@ -1252,17 +1281,17 @@ in with self; { GB2 = derive2 { name="GB2"; version="2.1"; sha256="06rcck97pdm1rsb02cy0jd9fknv0mz5jwk364gsaahdk56ddk18a"; depends=[cubature hypergeo laeken numDeriv survey]; }; GBJ = derive2 { name="GBJ"; version="0.5.0"; sha256="07wrydd2vlvwc56hgcrqbass0d0qamn3rg5vsf9bamxa6pcg9s53"; depends=[BH mvtnorm Rcpp SKAT]; }; GCAI_bias = derive2 { name="GCAI.bias"; version="1.0"; sha256="10092mwpmfbcga0n39a0i6g8xxch8xiwg15cckipw6yxjyx0sivc"; depends=[]; }; - GCD = derive2 { name="GCD"; version="4.0.0"; sha256="05cn9g9pahx5g9qh2lyqqlaafd1jji9awi9wx6r9hm09g4bmqrba"; depends=[]; }; + GCD = derive2 { name="GCD"; version="4.0.1"; sha256="00rbj57km104yi39rid922qvw1xdavs4f82cnrsv1gnn9ic7fv3q"; depends=[]; }; GCPM = derive2 { name="GCPM"; version="1.2.2"; sha256="0k2ng78bk3bxpj6nz80j5cvjd56zjz328ga68vyyc3hvdjgpspqj"; depends=[Rcpp RcppProgress]; }; GCalignR = derive2 { name="GCalignR"; version="1.0.1"; sha256="1p1zxf5s75ckyj7a61n43ix314p3b99knyg6z5d4sn5n417h2m42"; depends=[ggplot2 pbapply readr reshape2 stringr]; }; - GD = derive2 { name="GD"; version="1.2"; sha256="10csmsf4xkd3w73nskd1sxm8c9i0rlrsxyb4dmjrv8l207cc80pb"; depends=[BAMMtools ggplot2 reshape2]; }; + GD = derive2 { name="GD"; version="1.3"; sha256="1bpcp048hphxjas3dhqyyvs1xbv0356495zhl4r0mgrk9969qkh2"; depends=[BAMMtools ggplot2 reshape2]; }; GDAdata = derive2 { name="GDAdata"; version="0.93"; sha256="13ks97i289rc4i7gpqrifwbj0m9rx8csjhnfg8mad10qmjwz7p8b"; depends=[]; }; GDAtools = derive2 { name="GDAtools"; version="1.4"; sha256="1i5g7gzl3fkhwxqizqwrn8098s5lrr0mk17wmpyf92s1sy315cpv"; depends=[FactoMineR nleqslv nnet]; }; GDELTtools = derive2 { name="GDELTtools"; version="1.2"; sha256="1rx6kjh7kmyycqapvbizcxkcfp09qvqv7k8f25v333sxkacpz6p5"; depends=[plyr TimeWarp]; }; - GDINA = derive2 { name="GDINA"; version="1.4.2"; sha256="14686mkyxk7gjp0ivz1wkmry15qrf50fcwwza1j98791yjkqsbyf"; depends=[alabama data_table ggplot2 MASS nloptr numDeriv Rcpp RcppArmadillo Rsolnp]; }; + GDINA = derive2 { name="GDINA"; version="2.0.8"; sha256="0mzs49hvns7bzs78ccdj6nzji0ci990sa2znsfnaqly6b38b7qaj"; depends=[alabama ggplot2 MASS nloptr numDeriv Rcpp RcppArmadillo Rsolnp shiny shinydashboard]; }; GEEaSPU = derive2 { name="GEEaSPU"; version="1.0.2"; sha256="02pwjqd94kranc1f69bx9rzk27kchavhvhl9fygjhrr40nwq3pbg"; depends=[gee Rcpp RcppArmadillo]; }; GEEmediate = derive2 { name="GEEmediate"; version="1.1.1"; sha256="1akgl4j38x4qf3z9d6z7cgjd7x9f0k3lrzyrzgykqhrzmbh68z2m"; depends=[gee]; }; - GENEAclassify = derive2 { name="GENEAclassify"; version="1.4.9"; sha256="1imq71nhr0bc08w8jvw57fvghczn1p3vb1n7xnk7i7n6aq23dzsx"; depends=[changepoint GENEAread MASS rpart signal]; }; + GENEAclassify = derive2 { name="GENEAclassify"; version="1.4.11"; sha256="0xb9fvd7vyfdpshx1y7jcwrm9fbb4mlkvw2f7qk7isgz8dvyhzdn"; depends=[changepoint GENEAread MASS rpart signal]; }; GENEAread = derive2 { name="GENEAread"; version="1.1.1"; sha256="0c3d76yl8dqclk8zhhgrd6bv6b599vkpbyg3hjspb6npdw6zs6k8"; depends=[bitops]; }; GENEAsphere = derive2 { name="GENEAsphere"; version="1.4"; sha256="0z6qazcgjcs03zz26167dxg6mgjaq1z0qdsa4ggh32813l4k0ijw"; depends=[GENEAread ggplot2 MASS misc3d rgl]; }; GENLIB = derive2 { name="GENLIB"; version="1.0.4"; sha256="1gl8qsgm9iy57rlajgc47lfxah52jsg7lpj131a6813kj0c639l7"; depends=[bootstrap doParallel foreach kinship2 lattice Matrix quadprog Rcpp]; }; @@ -1276,10 +1305,10 @@ in with self; { GExMap = derive2 { name="GExMap"; version="1.1.3"; sha256="1a6i2z9ndgia4v96nkr77cjqnbgxigqbqlibg82gwa0a6pl7r7nz"; depends=[Biobase multtest]; }; GFA = derive2 { name="GFA"; version="1.0.3"; sha256="10sivsqxliwcrp0ay3n2my28zki6f8vpv8i9lbld8qinx1iv2mq3"; depends=[]; }; GFD = derive2 { name="GFD"; version="0.2.5"; sha256="14bhqk5hi9w2078nn382ksgw37bx5r1jadizcrwbisglccxa0ncd"; depends=[magic MASS Matrix plotrix plyr]; }; - GFGM_copula = derive2 { name="GFGM.copula"; version="1.0.2"; sha256="0xxxjhhngc23ac891pn6hwn4y4wqil4xb83s7pq92izz5mb05q96"; depends=[cmprsk joint_Cox]; }; + GFGM_copula = derive2 { name="GFGM.copula"; version="1.0.3"; sha256="0pqx5fr039izhwi2kdzq9v6nlviyjclzddd092g8mkadj36diwk5"; depends=[cmprsk compound_Cox joint_Cox]; }; GGEBiplotGUI = derive2 { name="GGEBiplotGUI"; version="1.0-9"; sha256="0nd0ky3m1avy82z48g7hcysq0y0agxjxdn0g624dkm2w99avxw3j"; depends=[rgl tkrplot]; }; GGEBiplots = derive2 { name="GGEBiplots"; version="0.1.1"; sha256="1xnxaylikjd378flw3rqw36z27b2limkmyad97zhf1cbva317d1b"; depends=[gge GGEBiplotGUI ggforce ggplot2 scales]; }; - GGIR = derive2 { name="GGIR"; version="1.5-17"; sha256="0p452p9xcbd0r9w2aqdiw4i740xxxbgi9hk4k5xqifdlkfg4gvmb"; depends=[data_table Rcpp]; }; + GGIR = derive2 { name="GGIR"; version="1.5-18"; sha256="0v8i3rw5wxmzhfb3dawyykabypvfjskbsmr0phky994kx93zm604"; depends=[data_table Rcpp]; }; GGMridge = derive2 { name="GGMridge"; version="1.1"; sha256="0zbfvvp7l836m118m8nmdvw1w7xq6d3b7qirskjsq1dkk23j41hs"; depends=[MASS mvtnorm]; }; GGMselect = derive2 { name="GGMselect"; version="0.1-12.1"; sha256="0nrkbai9jps54ldx3cvwd4x4wingfj73najwx4bv98z8zxpbnky5"; depends=[gtools lars mvtnorm]; }; GGUM = derive2 { name="GGUM"; version="0.3.1"; sha256="1dgnhg0ggnp3f8qwzrcnapwzaraddnk2xsksin6pzybz21hfdvxd"; depends=[abind psych Rdpack viridis xlsx]; }; @@ -1295,11 +1324,13 @@ in with self; { GLIDE = derive2 { name="GLIDE"; version="1.0.1"; sha256="02pmn0ydrmblgchz189avlrz3zaz0qfhy75d945yphpmvjf9f9m5"; depends=[doParallel foreach MASS]; }; GLMMRR = derive2 { name="GLMMRR"; version="0.2.0"; sha256="0s3jfh720acfmbadilq2c6gql3yifsbijpmw1jkzbsdc87pqi1db"; depends=[lattice lme4]; }; GLMaSPU = derive2 { name="GLMaSPU"; version="1.0"; sha256="0zx2bza5v5cfp9v7hf42s57522b6prawcwl77aa3kvjcnb0ish6g"; depends=[MASS mnormt mvtnorm Rcpp RcppArmadillo]; }; + GLMsData = derive2 { name="GLMsData"; version="1.0.0"; sha256="12q41zxniblzys20vjrf5skj8cbzlwb92mwk6jvnyd86lc70bsh1"; depends=[]; }; GLSME = derive2 { name="GLSME"; version="1.0.3"; sha256="0flja5gk25k4z9hwskvdw4c1f88scc47xvc1l3d2447fkfrb0bwc"; depends=[corpcor mvtnorm]; }; GMAC = derive2 { name="GMAC"; version="3.0"; sha256="0c2cfpr8dik7j5br87hkvswrhqzj5vcna54gw6ffdf1rk9rz9j22"; depends=[]; }; GMCM = derive2 { name="GMCM"; version="1.2.4"; sha256="1y0yr6i4l28qw22drca7r4mzqjfbpm3jdssfb7p8pc664g6vmm81"; depends=[Rcpp RcppArmadillo]; }; GMD = derive2 { name="GMD"; version="0.3.3"; sha256="0hdya8ai210wxnkfra9bzyswk3gib5fm53fs61rh0nsmg3ysdga6"; depends=[gplots]; }; GMDH = derive2 { name="GMDH"; version="1.6"; sha256="093glyz73246m5f2xb2xgbgi80haj4fanmr325byr99dnf4x35yn"; depends=[MASS]; }; + GMDH2 = derive2 { name="GMDH2"; version="1.1"; sha256="16jnpwr7sbfai0h5prr7768nsxz65qfds46gphdryi5nd65dbv60"; depends=[e1071 glmnet magrittr MASS nnet plotly randomForest xtable]; }; GMMBoost = derive2 { name="GMMBoost"; version="1.1.2"; sha256="01q165vkdiv4qh96lha0g2g94jpnzdclbby6q43ghh9j1yrd4qzj"; depends=[magic minqa]; }; GMSE = derive2 { name="GMSE"; version="0.3.1.9"; sha256="02qzz4w99qissb3b95p7y5bk2wn43k01802vwnzxlq27swhkg17i"; depends=[shiny shinydashboard shinyjs]; }; GNE = derive2 { name="GNE"; version="0.99-1"; sha256="1avsl54xdlqq8pw16g84igcwms7if7lvdblqvfc2cn3sk8qi5xdv"; depends=[alabama BB nleqslv SQUAREM]; }; @@ -1312,7 +1343,7 @@ in with self; { GPCMlasso = derive2 { name="GPCMlasso"; version="0.1-1"; sha256="1qlbs9xxdn7q90afh5zc6fgp213fxyh3xmmhz5dm6azbwx92x3la"; depends=[car caret cubature ltm mirt mvtnorm Rcpp RcppArmadillo statmod TeachingDemos wordcloud]; }; GPCSIV = derive2 { name="GPCSIV"; version="0.1.0"; sha256="118l792mwd54xsi3g8afg3vc6wds8j6fyaz3mwmq04mlcyblym4l"; depends=[scatterplot3d sqldf]; }; GPFDA = derive2 { name="GPFDA"; version="2.2"; sha256="1xqk03g8b8hi1vdqh6a9wml8ln0ad6lmy14z8k8c4wdc5kbzdr0b"; depends=[fda fda_usc MASS spam]; }; - GPGame = derive2 { name="GPGame"; version="1.0.0"; sha256="1ln3smlhr0hz5nkbdfhrpvz6cn0jz21w8p0d3xlcv4szlmkx8lx6"; depends=[DiceDesign DiceKriging emoa GPareto KrigInv MASS mnormt mvtnorm Rcpp]; }; + GPGame = derive2 { name="GPGame"; version="1.1.0"; sha256="00qiqd7p84k22wbmlmj8a81fy5m5rl6afhj2q61j0akicnbzjfw9"; depends=[DiceDesign DiceKriging GPareto KrigInv MASS mnormt mvtnorm Rcpp]; }; GPLTR = derive2 { name="GPLTR"; version="1.2"; sha256="0b4s090jlp2qpqqr0b1ifwyf2fal156y7vg9mjkw53y623ms5pix"; depends=[rpart]; }; GPM = derive2 { name="GPM"; version="1.0"; sha256="0k2mglgmq1hb0x9gdypvzgi7s3vkdpf6qcvgyd4qc3mfg3avbnmk"; depends=[lattice lhs randtoolbox]; }; GPPFourier = derive2 { name="GPPFourier"; version="2.1"; sha256="1wlzpiqlg5zx3rv29l1ql3apcaykvk72zc0anwxr152qlk910l2q"; depends=[mFilter Tides]; }; @@ -1321,7 +1352,7 @@ in with self; { GPoM = derive2 { name="GPoM"; version="1.1"; sha256="0n1fnmwiygispihqgcx762wkvp28pnm8kcwlx9vxhpafswsp112q"; depends=[deSolve rgl]; }; GPrank = derive2 { name="GPrank"; version="0.1.2"; sha256="0z9xhydnq04p872zl7glxhndmijjihfgffl6bijc9a0rs95zaacd"; depends=[gptk matrixStats RColorBrewer tigreBrowserWriter]; }; GPseq = derive2 { name="GPseq"; version="0.5"; sha256="0k5xif44qk2ppvcyja16xshmfciq1h84l1w6d8dfkyryfajbc8ai"; depends=[]; }; - GPvam = derive2 { name="GPvam"; version="3.0-4"; sha256="1vqvm9647jnw91vpf4dhjjp9rc05n5k6qgzilfpmcg4a7zzi917k"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; + GPvam = derive2 { name="GPvam"; version="3.0-5"; sha256="0inhhx5ll4ybkwp71ijigxlyxsa0rdyxb38kgfgxb588dsk4scjz"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; GRANBase = derive2 { name="GRANBase"; version="1.6.8"; sha256="1pcm0fy3jwwaifd4m7qyil1miaxmi6v7glp2krbkngp6f8qb0bph"; depends=[covr dplyr hexSticker htmlTable jsonlite RCurl sendmailR stringi switchr]; }; GRAPE = derive2 { name="GRAPE"; version="0.1.0"; sha256="0kcyz8x6yzq83hcwdlx7yw5jpww819f9d1hax19vn31ccq71xkyw"; depends=[]; }; GRCdata = derive2 { name="GRCdata"; version="1.0"; sha256="0nshii6kfvffncgcrmm7wvniq94j9djj84jikcb6ck49viikkrky"; depends=[cubature nloptr]; }; @@ -1338,7 +1369,7 @@ in with self; { GSIF = derive2 { name="GSIF"; version="0.5-4"; sha256="1vh3dffi5hakk32rwaabw9k34wigd0n5bhzcyqhadl6fxjsaz6b6"; depends=[aqp dismo gstat plotKML plyr raster rgdal RSAGA scales sp]; }; GSM = derive2 { name="GSM"; version="1.3.2"; sha256="04xjs9w4gaszwzxmsr7657ry2ywa9pvpwpczpvinxi8vpj347jbb"; depends=[gtools]; }; GSMX = derive2 { name="GSMX"; version="1.3"; sha256="1n1d7rixj14ari46snsmi48qfmy00ihmzvayk3hkrp2d2d0xi2gh"; depends=[MASS]; }; - GSODR = derive2 { name="GSODR"; version="1.1.2"; sha256="1zr19zik2ic38wg71gk9iapzmdh4z426djy8w4z25v148940liss"; depends=[curl dplyr magrittr purrr R_utils readr rgdal rlang sp tibble]; }; + GSODR = derive2 { name="GSODR"; version="1.2.0"; sha256="0zhj2c51mxkdy2z7bllas1qb5jg83263w9vv6iksy5j47vxm2py8"; depends=[curl dplyr magrittr purrr R_utils readr rlang tibble]; }; GSSE = derive2 { name="GSSE"; version="0.1"; sha256="034mmxa6kjq5kgikhb5q75viagz5ck9irrjbxm26zq9099qxm13b"; depends=[Iso zoo]; }; GSparO = derive2 { name="GSparO"; version="1.0"; sha256="0xna2crxqwy8fj0s79rxbdcaz9x912rp1vdwqv1557fsnmfv2yf0"; depends=[ggplot2 ThreeWay]; }; GUIDE = derive2 { name="GUIDE"; version="1.2.3.1"; sha256="02chn2mzh6smmiv8rp00cq5rff18bqszazbk8svmvvlgn0a25pj4"; depends=[rpanel tkrplot]; }; @@ -1375,7 +1406,6 @@ in with self; { GeneClusterNet = derive2 { name="GeneClusterNet"; version="1.0.1"; sha256="1xi4c041c4m39f9wb5fklgmhi6ng78iwzzqch5xk9hx5blq6zd4m"; depends=[G1DBN igraph MASS]; }; GeneCycle = derive2 { name="GeneCycle"; version="1.1.2"; sha256="1ghdzdddbv6cnxqd08amy4c4s5jsxa637r828ygffk6z76xjr6b6"; depends=[fdrtool longitudinal MASS]; }; GeneF = derive2 { name="GeneF"; version="1.0"; sha256="0bizf47944b2zv9ayxb9rhrqx0ilz2xlvkw7x5vbg7l67y2g2l4d"; depends=[]; }; - GeneFeST = derive2 { name="GeneFeST"; version="1.0.1"; sha256="0qgzjzhwf3nigfi09maywg9zkjxiicwiwiyqfcdk9gsvmp6mr4qn"; depends=[BASIX]; }; GeneNet = derive2 { name="GeneNet"; version="1.2.13"; sha256="0w52apk0nnr8nsskf26ff7ana8xiksr8wqmkjxzwhzgg7fncm61p"; depends=[corpcor fdrtool longitudinal]; }; GeneReg = derive2 { name="GeneReg"; version="1.1.2"; sha256="081qc66mb17dwk886x9l2z4imklxnfs02yqql0ri9c47bpsga7wp"; depends=[igraph]; }; GeneralOaxaca = derive2 { name="GeneralOaxaca"; version="1.0"; sha256="19j5c5xr6mdb6pmih94wbjas4yh0dmsqfggg8clvdxkpwk0h338v"; depends=[boot]; }; @@ -1407,7 +1437,7 @@ in with self; { Giza = derive2 { name="Giza"; version="1.0"; sha256="13nkm8mk1v7s85kmp6psvnr1v97vi0gid8rsqyq3x6046pyl5z6v"; depends=[lattice reshape]; }; GlobalDeviance = derive2 { name="GlobalDeviance"; version="0.4"; sha256="0s318arq2kmn8fh0rd5hd1h9wmadr9q8yw8ramsjzvdc41bxqq1a"; depends=[snowfall]; }; GlobalFit = derive2 { name="GlobalFit"; version="1.2"; sha256="01s51nxcsl8xxn6khbv5jsvpwblwf0iamvr477a1rraqqqj94zx0"; depends=[sybil]; }; - GlobalOptions = derive2 { name="GlobalOptions"; version="0.0.12"; sha256="1abpc03cfvazbwj2sx6qgngs5pgpzysvxkana20hyvb4n7ws77f0"; depends=[]; }; + GlobalOptions = derive2 { name="GlobalOptions"; version="0.0.13"; sha256="04jvha0mafslqz5nr99xjylg9n2x31gj9v4mgyg7qcmfwpqyw3ch"; depends=[]; }; Gmedian = derive2 { name="Gmedian"; version="1.2.4"; sha256="0lr1hwprqy9mq5qyp83qqxj8dh5sy487xkqbv2y1qdinzj62pvcn"; depends=[Rcpp RcppArmadillo robustbase RSpectra]; }; Gmisc = derive2 { name="Gmisc"; version="1.5"; sha256="0jiyqi0mmwbb7v8jqksvm42r4sq1d5najqkapnpj5jzn6izq6vh5"; depends=[abind checkmate forestplot Hmisc htmlTable knitr lattice magrittr Rcpp rmarkdown XML]; }; GoFKernel = derive2 { name="GoFKernel"; version="2.1-0"; sha256="17jd1dqwpki4mmzk695g25vvfwvkp4k7jhvw06dmdmn5j09hw373"; depends=[KernSmooth]; }; @@ -1419,15 +1449,16 @@ in with self; { GrammR = derive2 { name="GrammR"; version="1.1.0"; sha256="1rwvgznfxp7d3rzymyljj3pn3z3ggia1bhi4nvpgd79qd4cifi2g"; depends=[ape cluster GUniFrac gWidgets gWidgetsRGtk2 MASS rgl RGtk2]; }; GraphFactor = derive2 { name="GraphFactor"; version="1.1"; sha256="1jxibd2d5b6vlq27m9ppmm96wsnkqn4pz66n9pwdl8wg2v85npw5"; depends=[igraph]; }; GraphKit = derive2 { name="GraphKit"; version="0.5"; sha256="1ip0rkrwxpjcd9mhz2z8n7lwdrjj1idymsafm8aac1hfbxr6c0xz"; depends=[Rcpp RcppArmadillo]; }; + GraphPCA = derive2 { name="GraphPCA"; version="1.1"; sha256="0x6j3lyd70zc0c1al1407ma8crzi174d5dqkz6lx4vx24knrlhbs"; depends=[FactoMineR ggplot2 ggplot2movies scatterplot3d]; }; GrapheR = derive2 { name="GrapheR"; version="1.9-86"; sha256="1iizknyrpgiz1fh1fjls58n5v5fpki25j7kfbwfkp5ijf1q54ml6"; depends=[]; }; GrassmannOptim = derive2 { name="GrassmannOptim"; version="2.0"; sha256="05r5zg4kf3xd6pp56bl8ldchdxvspxkdfd33b623hndjhn4lj2lq"; depends=[Matrix]; }; GreedyEPL = derive2 { name="GreedyEPL"; version="1.0"; sha256="19b8fwxsjd6shwjxhpawa8pmlj6yn0j4577g6b93xbcs76wgrvd1"; depends=[Rcpp RcppArmadillo]; }; GreedyExperimentalDesign = derive2 { name="GreedyExperimentalDesign"; version="1.1"; sha256="0r6b8hzzx0ja0skp4w4s49jpkkjbb3an62vp74qh5sf2wi1hx9x6"; depends=[rJava]; }; GreedySBTM = derive2 { name="GreedySBTM"; version="1.0"; sha256="1r29cd8nxpyc82rz2xb9mk9wc17gcdlcl9lw1j3y4npr2z0qhf13"; depends=[Rcpp RcppArmadillo]; }; - Greg = derive2 { name="Greg"; version="1.2"; sha256="19bzv2nknahzbdnl7n0pcnavsdlwgkprc0yk3ksqllfawnvi39f9"; depends=[Epi forestplot Gmisc Hmisc htmlTable knitr magrittr nlme rms sandwich stringr]; }; + Greg = derive2 { name="Greg"; version="1.2.1"; sha256="0li05w2nbqvabhwwmhxiwjalr1q79xad9yd2vycpz198c048kiqf"; depends=[Epi forestplot Gmisc Hmisc htmlTable knitr magrittr nlme rms sandwich stringr]; }; Grid2Polygons = derive2 { name="Grid2Polygons"; version="0.2.1"; sha256="0db5kv0rbsg077h2badw28x9363ymqkr52sw5wlg9x1bk9cczhi7"; depends=[inlmisc raster rgeos sp]; }; GriegSmith = derive2 { name="GriegSmith"; version="1.0"; sha256="1a7gnaig1wvxpph7d8c37kx51dznzk0457fzf7alw95iwpyb4z7j"; depends=[spatstat]; }; - GroupSeq = derive2 { name="GroupSeq"; version="1.3.4"; sha256="0m127793gh00spj2ghapmysvf3dbxhpf2jlms3xxrflh7ajrmy5m"; depends=[]; }; + GroupSeq = derive2 { name="GroupSeq"; version="1.3.5"; sha256="0c74nlsqa5ly0kf6p4n7gfvd0ygkq78bx851ryniwpnnalvsq8l7"; depends=[]; }; GroupTest = derive2 { name="GroupTest"; version="1.0.1"; sha256="1v2230mw0irsr5y8n45g8sd362jp7f6dy2r532mhflfdqy6i2khs"; depends=[]; }; GrpString = derive2 { name="GrpString"; version="0.3.2"; sha256="14ss6assqk6s9kv4bvzlydm8qrbnslm4vj876q5dn2dw4k50dai1"; depends=[cluster plyr Rcpp]; }; GsymPoint = derive2 { name="GsymPoint"; version="1.1.1"; sha256="1fg8vqd86kcpciphmlcxlm0rk01iza7md5y8kcxp9i732n4zn7r8"; depends=[ROCR Rsolnp truncnorm]; }; @@ -1457,7 +1488,7 @@ in with self; { HH = derive2 { name="HH"; version="3.1-34"; sha256="1srr195ha8n4va30impm12p2kamkl36whl8g10pl80hwgg20pbqk"; depends=[abind colorspace gridExtra Hmisc lattice latticeExtra leaps multcomp RColorBrewer reshape2 Rmpfr shiny vcd]; }; HHG = derive2 { name="HHG"; version="2.2"; sha256="114nfpdjdisryil9l8cws885qdskgrjm2cclx543hh4cdhpnkxnp"; depends=[Rcpp]; }; HI = derive2 { name="HI"; version="0.4"; sha256="0i7y4zcdr6wcjy43lz9h8glzpdv0pz7livr95xb1j4p8zafykday"; depends=[]; }; - HIBPwned = derive2 { name="HIBPwned"; version="0.1.6"; sha256="0ym62n1rmi8pjj37cxbrdmih7530nhmy77gxb8yylppjf3rikci4"; depends=[httr jsonlite ratelimitr urltools]; }; + HIBPwned = derive2 { name="HIBPwned"; version="0.1.7"; sha256="04l9309lmgn33gdwm162g6vywz8p9sdgmy2baxj98jv7x791wj3r"; depends=[crul jsonlite memoise ratelimitr urltools]; }; HIMA = derive2 { name="HIMA"; version="1.0.7"; sha256="0mvphwmm8gmin933bji2l2gbpjzm42vyc7sdka4xpjfsaal9pp9i"; depends=[doParallel foreach iterators ncvreg]; }; HIV_LifeTables = derive2 { name="HIV.LifeTables"; version="0.1"; sha256="0qa5n9w5d5l1kr4827a34581q380xmpyzmmhhl300z1jwr0j94df"; depends=[]; }; HIest = derive2 { name="HIest"; version="2.0"; sha256="0ik55kxhzjyg6z6072iz9nfaj7x1nvf91l1kysgvkjccr6jf3y86"; depends=[nnet]; }; @@ -1504,19 +1535,18 @@ in with self; { Harvest_Tree = derive2 { name="Harvest.Tree"; version="1.1"; sha256="021zmppy7p2iakaxirfjdb5jzakg1ijma9d25ly2ni0nx0p1mh6z"; depends=[rpart]; }; HelpersMG = derive2 { name="HelpersMG"; version="3.0.0"; sha256="1y5q4z9yxap16bkcjsybm2754wm0x31hfqdnp2bb4gbvhz1jhas6"; depends=[coda]; }; HeritSeq = derive2 { name="HeritSeq"; version="1.0.0"; sha256="0ibb2nkjk1d59gc1ljihihsjai3jp4jsbbariv05h1z26pgpc9p3"; depends=[cplm DESeq2 lme4 MASS pbapply SummarizedExperiment tweedie]; }; - HiCblock = derive2 { name="HiCblock"; version="1.2"; sha256="17d5jzswzjy7hwr9lyfd273xqa5ssm715wybk0zxd4gsnipvnbsk"; depends=[GenomeInfoDb GenomicRanges glmnet HiTC IRanges MASS Matrix rtracklayer S4Vectors]; }; - HiCfeat = derive2 { name="HiCfeat"; version="1.2"; sha256="01b8isvn4my41n3608k80d38vgd3waq7rxsx1v4p0rl1f3pxn7dn"; depends=[GenomeInfoDb GenomicRanges glmnet IRanges Matrix rtracklayer]; }; - HiCglmi = derive2 { name="HiCglmi"; version="1.1"; sha256="1q47kayga6g4vczh92a63a4ni5hvmrc7477wsjkhp846j3wswm5j"; depends=[GenomeInfoDb GenomicRanges glmnet HiTC IRanges MASS Matrix rtracklayer S4Vectors]; }; + HiCblock = derive2 { name="HiCblock"; version="1.4"; sha256="07f94j9y5g6f09yi7iwag020ddfhpvrj5idfxwbr900hj3vgm1gm"; depends=[GenomeInfoDb GenomicRanges glmnet HiTC IRanges MASS Matrix rtracklayer S4Vectors]; }; + HiCfeat = derive2 { name="HiCfeat"; version="1.3"; sha256="1hf24g4cph13s0cbicll3dxvxycdzwbsy6cv297vlkw4sc574ixw"; depends=[GenomeInfoDb GenomicRanges glmnet IRanges Matrix rtracklayer]; }; + HiCglmi = derive2 { name="HiCglmi"; version="1.3"; sha256="17vwdhnf36cg56vidq7d85s4vgk2pnn5py1y2wsl2dm41vdl0847"; depends=[GenomeInfoDb GenomicRanges glmnet HiTC IRanges MASS Matrix rtracklayer S4Vectors]; }; HiClimR = derive2 { name="HiClimR"; version="1.2.3"; sha256="1yv01pyfmgq306f3yravwf6sm79m0m93gpya95k85rxqdjl3c2hx"; depends=[]; }; HiCseg = derive2 { name="HiCseg"; version="1.1"; sha256="19581k3g71wrznyqrp4hmspqyzcbcfbc48xgjlq13zmqii45hcn6"; depends=[]; }; HiDimDA = derive2 { name="HiDimDA"; version="0.2-4"; sha256="0gxkxzys9mcy33xvsim8klaqmb2xwvy5bvgkn9r400j4qfjd3cgg"; depends=[]; }; - HiDimMaxStable = derive2 { name="HiDimMaxStable"; version="0.1.1"; sha256="0gscdjm48yyf8h3bn6xjbjlfc1hwbbh5j6v64c0z3d04h9q35c24"; depends=[copula maxLik mnormpow mnormt partitions VGAM]; }; HiLMM = derive2 { name="HiLMM"; version="1.1"; sha256="09135cwi6kqrvzdlivm86q1dqn6cbbi6nspdm0c2s700jl49pl5z"; depends=[]; }; HiddenMarkov = derive2 { name="HiddenMarkov"; version="1.8-11"; sha256="1yh85pdb9r90qxcl5gxslyplxzrx8knrrsl2q65l57zfkqj185ja"; depends=[]; }; HierO = derive2 { name="HierO"; version="0.2"; sha256="1lqj5grjly4kzxl7wb192aagz2kdvpnjdan2kcg5yxwvg1xcvwv1"; depends=[bitops RCurl rneos tcltk2 XML]; }; HighDimOut = derive2 { name="HighDimOut"; version="1.0.0"; sha256="0r7mazwq4fsz547d3nyavmqya7144lg3fkl5f7amrp48l9h85vx2"; depends=[DMwR FNN foreach ggplot2 plyr proxy]; }; - HistDAWass = derive2 { name="HistDAWass"; version="1.0.0"; sha256="0si57vmgnkrhyilk3vv4189c093n6if6i5nv3jylvhpmbf5nvm7p"; depends=[class FactoMineR ggplot2 ggridges histogram Rcpp RcppArmadillo]; }; - HistData = derive2 { name="HistData"; version="0.8-2"; sha256="0qd3a1v3xg39nwqfw63k6210vqkpknq0j3r36sy1910hn0nr83fa"; depends=[]; }; + HistDAWass = derive2 { name="HistDAWass"; version="1.0.1"; sha256="1lc9pz3f6akzyisgwzfl4m5z400bailv1bmsb3snha8nhpqdk3nk"; depends=[class FactoMineR ggplot2 ggridges histogram Rcpp RcppArmadillo]; }; + HistData = derive2 { name="HistData"; version="0.8-4"; sha256="0qw8jrh7g9w49k6f8hsg9wvy8ms2pcsmiv2ysxfcr89v60q084rb"; depends=[]; }; HistogramTools = derive2 { name="HistogramTools"; version="0.3.2"; sha256="1wkv6ypn006d8j6bpbhc1knw0bky4y8r7jp87482yd19q5ljsgv0"; depends=[ash Hmisc stringr]; }; HiveR = derive2 { name="HiveR"; version="0.3.42"; sha256="09h061511pk7iy1k9gb3ifa5q6gd17ix9sn2fshl6gp5sxnysn4f"; depends=[jpeg plyr png RColorBrewer rgl tkrgl]; }; Hmisc = derive2 { name="Hmisc"; version="4.1-1"; sha256="160l50ppjs69ipcaya1mlcz29zbn5rmqg91r09dvzzvkvwfb47cr"; depends=[acepack base64enc cluster data_table foreign Formula ggplot2 gridExtra gtable htmlTable htmltools lattice latticeExtra nnet rpart survival viridis]; }; @@ -1553,14 +1583,14 @@ in with self; { ICCbin = derive2 { name="ICCbin"; version="1.1.1"; sha256="1pzlaj7w98pgrlg3zvpmdv0dpgi5gih0j73qv86ak75fkxvrnzzw"; depends=[]; }; ICE = derive2 { name="ICE"; version="0.69"; sha256="04p8lakaha28mdh965w0ppyxfrz5ssi1n9xifvsbn3ihdra67rip"; depends=[KernSmooth]; }; ICEbox = derive2 { name="ICEbox"; version="1.1.2"; sha256="170gg2fg9307yc2b25lsj8d1zla0frjxl47qh0njlqlrpi8jmm7i"; depends=[sfsmisc]; }; - ICEinfer = derive2 { name="ICEinfer"; version="1.0-1"; sha256="0gjgr1r33w6d5ra0njh15lj46lw6v751yl8iqrdf4a5pazs7w3lm"; depends=[lattice]; }; + ICEinfer = derive2 { name="ICEinfer"; version="1.0-4"; sha256="0fa5mxj224jgppp09bblyi9w9racz5lb1i20npvnccafcm36f7y1"; depends=[lattice]; }; ICGE = derive2 { name="ICGE"; version="0.3"; sha256="0xin7zml1nbygyi08hhg3wwr2jr1zcsvrlgia89zp4xanxlzgaqa"; depends=[cluster MASS]; }; ICGOR = derive2 { name="ICGOR"; version="2.0"; sha256="18fn10f5nqqbrfibqmp602nqpx794fy3gpxp1bd10xn48llhqfc4"; depends=[ICsurv MASS pracma survival]; }; ICRanks = derive2 { name="ICRanks"; version="1.3"; sha256="0n8gyqlwx38v2lfx7r49h43k2f4z4ml78x3lq0sc952n4rckzgiv"; depends=[multcomp Rcpp]; }; ICS = derive2 { name="ICS"; version="1.3-1"; sha256="0x3cwhvzcibgyb8gqy6dc6lgnvbf6x8425zai57g8yn5i6zzc1li"; depends=[mvtnorm survey]; }; ICSNP = derive2 { name="ICSNP"; version="1.1-1"; sha256="1zf0k1kwdmjjqsbiiy3r2l47vjsrg09fj65p6zfld3j4gjbp17fd"; depends=[ICS mvtnorm]; }; ICSOutlier = derive2 { name="ICSOutlier"; version="0.3-0"; sha256="1vj1y4zw8pkghkg4qnmx0yk1yw4zzl9075n5czrna9ckk2p29fmh"; depends=[ICS moments mvtnorm]; }; - ICSShiny = derive2 { name="ICSShiny"; version="0.4"; sha256="02qcph5ax4gwz44zq8riv4yl4h0wdiwgxv7m96cpdh7gwfhwzgzr"; depends=[DT ICS ICSNP ICSOutlier rrcov shiny simsalapar]; }; + ICSShiny = derive2 { name="ICSShiny"; version="0.5"; sha256="0a13vps0mkv5qs6qnl7ar0mdbkbd7i1c6kgwahmkb3id3n9bw0cl"; depends=[DT ICS ICSNP ICSOutlier rrcov shiny simsalapar]; }; ICV = derive2 { name="ICV"; version="1.0"; sha256="1na87i39jy5d8ibldqcqz3a072ihkgcl0k629sxch9hk6v6j5lly"; depends=[]; }; ICcalib = derive2 { name="ICcalib"; version="1.0.7"; sha256="1p224srs1jakl7iyybcn9f6r9kcwxyrikdrfa9wjgkhz60pv88fs"; depends=[fitdistrplus icenReg ICsurv MASS msm numDeriv Rcpp RcppArmadillo survival]; }; ICsurv = derive2 { name="ICsurv"; version="1.0"; sha256="1mbndpy3x5731c9y955wscy76jrxlgv33bf6ldqp65cwyvdgxl86"; depends=[MASS matrixcalc]; }; @@ -1572,8 +1602,9 @@ in with self; { IDSpatialStats = derive2 { name="IDSpatialStats"; version="0.2.2"; sha256="0pfvdy82i5w6zrda2022m1v22dv2qsgcj1y7f8hqmaqvqgczizfk"; depends=[]; }; IDTurtle = derive2 { name="IDTurtle"; version="1.2"; sha256="15r806vk5lmvyclsynzq9qr8pgwwkxal1j6xcq6408i8kq1hk3fb"; depends=[]; }; IDetect = derive2 { name="IDetect"; version="0.1.0"; sha256="1q1jwgildhx6sp883ni7vcsa3gj997855v5ky41dyf34kv7hvdl1"; depends=[]; }; - IDmining = derive2 { name="IDmining"; version="1.0.3"; sha256="1kvnp0y0837cgvjjwv2rmh64vksa7c6ififs60w7g05l690fkb9v"; depends=[data_table doParallel foreach]; }; + IDmining = derive2 { name="IDmining"; version="1.0.4"; sha256="1jjxw9pdhd3wx5qnjnssf0j3bg91li1ar5ps02dhv0c49hslg0x0"; depends=[data_table doParallel foreach]; }; IFP = derive2 { name="IFP"; version="0.2.1"; sha256="06zyadcr8p6q0c5h9n29yl02ixysdj6lfbn9hfir0bk9hyv9yfyr"; depends=[coda haplo_stats]; }; + IGG = derive2 { name="IGG"; version="1.0"; sha256="1cibb9z18xc1zx1813lk14n6p5am84hm7w0hkrsif4j3p89lrwif"; depends=[GIGrvg glmnet MASS Matrix pscl]; }; IGM_MEA = derive2 { name="IGM.MEA"; version="0.3.5"; sha256="09k5di7bqlqi2m3jn39ahnf7x96wx1h06bw0ah6pdszwd97yy33i"; depends=[emdist ggplot2 gridExtra gtools lattice plyr reshape2]; }; IGP = derive2 { name="IGP"; version="0.1.0"; sha256="0xv89gmyfgnq5kzcmjbp5nx9zbr3gbdzkvffp99bxbkvf759m255"; depends=[PythonInR R6]; }; IHSEP = derive2 { name="IHSEP"; version="0.1"; sha256="1djc5509b5iyi6y0i36h77l6sq1h0w721v2isxqldcqk3gb0bx11"; depends=[lpint Rcpp]; }; @@ -1597,7 +1628,7 @@ in with self; { IPtoCountry = derive2 { name="IPtoCountry"; version="0.0.1"; sha256="1b10z93mc31cr1c5wxp9xz9cr3jm4n4g5kav09dyallpgw60rskp"; depends=[data_table devtools dtables ggplot2 install_load maps scales]; }; IQCC = derive2 { name="IQCC"; version="0.7"; sha256="1zalpmyywkrnci0jd8irakjhiqmr52zhj1sbxf9pz5c7wks2rdbc"; depends=[MASS miscTools qcc]; }; IRATER = derive2 { name="IRATER"; version="0.0.1"; sha256="0jxdvjmnmangbqy3ibb5qrj9jz3wrzs0wa1r2gjk4v8vsbk0ipcf"; depends=[coda lattice plyr R2admb]; }; - IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="2.0.8"; sha256="0imsssija6v91il3dw5ibzm09xyjbabp2xy9jp4ixj6x8295i5xg"; depends=[dplyr IRISSeismic pracma RCurl seismicRoll signal stringr XML]; }; + IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="2.1.0"; sha256="033j0dba1bzbbjn7q827h4d1rw91z8gbr2bb119lds4v8zkkfpxx"; depends=[dplyr IRISSeismic RCurl seismicRoll signal stringr XML]; }; IRISSeismic = derive2 { name="IRISSeismic"; version="1.4.6"; sha256="1kccc4rbnyczdif7plvl3jfa3nfqfasybbbqmdkfiz0mhgvn1z4r"; depends=[pracma RCurl seismicRoll signal stringr XML]; }; IROmiss = derive2 { name="IROmiss"; version="1.0.1"; sha256="01l08s1g7h8cki372daa61pw3wac3pbv5d4yqnphg5p8ihsmrc5d"; depends=[equSA huge mvtnorm ncvreg]; }; IRTShiny = derive2 { name="IRTShiny"; version="1.2"; sha256="094ax94y6k5z4vlxfla2w19f57q0z32nwwd5npjbgmnkhvfhhl9v"; depends=[beeswarm CTT ltm psych shiny shinyAce]; }; @@ -1641,7 +1672,8 @@ in with self; { Information = derive2 { name="Information"; version="0.0.9"; sha256="0pszwzj3r7vdvdsy9w1qz95zxp7y2bsyg36b58mm4qcvcvymd4kn"; depends=[data_table doParallel foreach ggplot2 iterators plyr]; }; InformationValue = derive2 { name="InformationValue"; version="1.2.3"; sha256="1b5g2wyp7x5cdhmf4325n3q7afa6i352lh80j28c8s4356pr3w9j"; depends=[data_table ggplot2]; }; InformativeCensoring = derive2 { name="InformativeCensoring"; version="0.3.4"; sha256="145k4hggymra2jnxkcck795xk280yyldfzh9ls2irnsxmxfszr52"; depends=[boot dplyr survival]; }; - Infusion = derive2 { name="Infusion"; version="1.1.8"; sha256="084k36d9bgwmcnrp1bw2vvby9j14qmw2c99pzaps0nlg10j8k4hg"; depends=[blackbox Matrix mvtnorm numDeriv proxy rcdd Rmixmod spaMM viridis]; }; + Infusion = derive2 { name="Infusion"; version="1.2.0"; sha256="00l12balvdypcypqj8b61lfbksh6jnayai4bxchnxv99h3jq4l24"; depends=[blackbox mvtnorm numDeriv pbapply proxy spaMM viridis]; }; + InjurySeverityScore = derive2 { name="InjurySeverityScore"; version="0.0.0.1"; sha256="13h2a95bzibszpbr6sjhm3hj03b4znrrczm8pvni70ln2lcskri0"; depends=[dplyr rlang tidyr]; }; InspectChangepoint = derive2 { name="InspectChangepoint"; version="1.0.1"; sha256="1wirdbz4v7hk7znpjhw9j3l596lmfcrlr4wxayw7klbbdhcwq5qs"; depends=[MASS]; }; IntClust = derive2 { name="IntClust"; version="0.0.2"; sha256="1n0ywickky1w5m8swfidiprdnkrv0mrh9z5294bimxj5ppi1yl8v"; depends=[a4Core ade4 analogue Biobase cluster e1071 FactoMineR ggplot2 gplots gridExtra gtools limma lsa plotrix pls plyr prodlim SNFtool]; }; IntLik = derive2 { name="IntLik"; version="1.0"; sha256="13ww5bsbf1vnpaip0w53rw99a8hxzziibj7j66cm31jmi8l6fznf"; depends=[maxLik]; }; @@ -1649,6 +1681,7 @@ in with self; { IntegratedJM = derive2 { name="IntegratedJM"; version="1.6"; sha256="0fv24z7vidhn09ljk09pjzkrlg2rlwxcrhfjc53ybjjgsgay99z6"; depends=[Biobase ggplot2 nlme]; }; IntegratedMRF = derive2 { name="IntegratedMRF"; version="1.1.8"; sha256="0y3hagjx3pzhqyqm3pydl3s3f1g9d5yb2w3ybxll11913p3gll3i"; depends=[bootstrap caTools ggplot2 limSolve MultivariateRandomForest Rcpp]; }; InterVA4 = derive2 { name="InterVA4"; version="1.7.5"; sha256="0la99ylx8fnn4kpqa364nhs12y2hzp3sm0awsx5sfdv6n7m9js33"; depends=[]; }; + InterVA5 = derive2 { name="InterVA5"; version="1.0"; sha256="0lp75yinm1ph648s0jxgjixmn4q9g1rbky6hnppicpan2mk6d7ls"; depends=[]; }; Interact = derive2 { name="Interact"; version="1.1"; sha256="1g9zhafdpr7j410bi8p03d8x9f8m3n329x8v01yk15f65fp7pl1d"; depends=[]; }; InteractiveIGraph = derive2 { name="InteractiveIGraph"; version="1.0.6.1"; sha256="0srxlp77xqq0vw2phfv7zcnqswi2i5nzkpqbpa5limqx00jd12zy"; depends=[igraph]; }; Interatrix = derive2 { name="Interatrix"; version="1.1.1"; sha256="1ljxgiia0y8wv1rlm5brd0yvs1r7r5wyrs6nykmwrwwya4k34mpz"; depends=[MASS tkrplot]; }; @@ -1666,8 +1699,8 @@ in with self; { IsoCI = derive2 { name="IsoCI"; version="1.1"; sha256="0r7ksfic6p2v95c953s4gbzzclk4ldxysm8szb8xba1w0nx2izil"; depends=[KernSmooth]; }; IsoGene = derive2 { name="IsoGene"; version="1.0-24"; sha256="0flm0mszankvl3aizwsazyhvz2xkr4gfqiqywpc0r1swqj19610r"; depends=[affy Biobase ff Iso xtable]; }; IsoSpecR = derive2 { name="IsoSpecR"; version="1.0.3"; sha256="1cnkzc29k0inz6kdn77l0ymzjgf1hid8jza7nla4ym2s0gidgdyf"; depends=[Rcpp]; }; - IsoplotR = derive2 { name="IsoplotR"; version="1.0"; sha256="0cf2y81s2sc2jqbr431hjv5i347m1q5c5dxrak7ns7s8d902729y"; depends=[MASS]; }; - IsoriX = derive2 { name="IsoriX"; version="0.7"; sha256="0b94s94axrqgv3dm9dbkdnh6imlzn245f2pi7wbj99nqhwa47ynb"; depends=[latticeExtra numDeriv raster rasterVis sp spaMM viridisLite]; }; + IsoplotR = derive2 { name="IsoplotR"; version="1.1"; sha256="0w1zsb6qjcgyig8mahmpw0plxzqm2yqvg7gnqf50q1mpvdani2f4"; depends=[MASS]; }; + IsoriX = derive2 { name="IsoriX"; version="0.7.1"; sha256="1x2vdgvnfkrgcrm7pdrdvr7m72y0274dab5cyhz31j8l2gqxw9la"; depends=[latticeExtra numDeriv raster rasterVis sp spaMM viridisLite]; }; IsotopeR = derive2 { name="IsotopeR"; version="0.5.4"; sha256="0xgha5alh5y5qfz00rl73q4xlamnmrwij7kckljmy6zgrlrdnl6x"; depends=[colorspace ellipse fgui plotrix runjags]; }; JADE = derive2 { name="JADE"; version="2.0-1"; sha256="0s7cdvhjcdxdqv4mgjd07xi3s0ngjvpxsmy0ary735rs5y6198mm"; depends=[clue]; }; JAGUAR = derive2 { name="JAGUAR"; version="3.0.1"; sha256="0lyc8biwj9yir1i06klp2jkb31mnzwp226aw7pwabkprfhqgfmqd"; depends=[lme4 plyr Rcpp RcppArmadillo RcppProgress reshape2]; }; @@ -1677,8 +1710,8 @@ in with self; { JGEE = derive2 { name="JGEE"; version="1.1"; sha256="078348n623hlyc3n9yh67vv5acsnxapmbwybvrb1i7kawmqw5msi"; depends=[gee MASS]; }; JGL = derive2 { name="JGL"; version="2.3"; sha256="1351iq547ln06nklrgx192dqlfnn03hkwj3hrliqzfbmsls098qc"; depends=[igraph]; }; JGR = derive2 { name="JGR"; version="1.8-4"; sha256="0zfjfqlfrsz4wjdq78zasvgd3ldgcx20h16bbar1l7wv843j71ym"; depends=[JavaGD rJava]; }; - JM = derive2 { name="JM"; version="1.4-7"; sha256="1ajdmabifzg4jp74ghas5wf3vp4x2vnc6sh811n44a1ni727sb2n"; depends=[MASS nlme survival]; }; - JMbayes = derive2 { name="JMbayes"; version="0.8-70"; sha256="1xvzyy2h3p30wxvgrm6d4dmxwiqs4l7dafpanlnykgih9wmh7xsf"; depends=[doParallel foreach Hmisc jagsUI MASS nlme Rcpp RcppArmadillo rstan shiny survival xtable]; }; + JM = derive2 { name="JM"; version="1.4-8"; sha256="1nq07hw30fqnag1h08b7crl2yfs85gyrn70aaw11bdbjv06r2x55"; depends=[MASS nlme survival]; }; + JMbayes = derive2 { name="JMbayes"; version="0.8-71"; sha256="0vbw3z1njl3jm4qixzh5fs3gmiqz7n3kz3a4a9sdxj498z063svj"; depends=[doParallel foreach Hmisc jagsUI MASS nlme Rcpp RcppArmadillo rstan shiny survival xtable]; }; JMcmprsk = derive2 { name="JMcmprsk"; version="0.9.3"; sha256="0bjaiygn2sq40f2cwa1c6j73748j2cx5q69pd4jgfgbpm9r25r4f"; depends=[MASS Rcpp]; }; JMdesign = derive2 { name="JMdesign"; version="1.1"; sha256="0w5nzhp82g0k7j5704fif16sf95rpckd76jjz9fbd71pp2d80vlh"; depends=[]; }; JOP = derive2 { name="JOP"; version="3.6"; sha256="1kpb1dy2vm4jgzd3h0qgdw53nfp2qi74hgq5l5inxx4aayncclk7"; depends=[dglm Rsolnp]; }; @@ -1693,10 +1726,11 @@ in with self; { Jmisc = derive2 { name="Jmisc"; version="0.3.1"; sha256="1szn29dng54l2xmrm6pg3d5rmwdc1ks23vsnsmplnr5rx7yj002s"; depends=[]; }; JoSAE = derive2 { name="JoSAE"; version="0.2.3"; sha256="0b1jwplds5b7z15v6bvqj1rbn7zxpgvh2ykhqplxzv4mlaw6i0li"; depends=[nlme]; }; Johnson = derive2 { name="Johnson"; version="1.4"; sha256="12ajcfz5mwxvimv8nq683a2x3590gz0gnyviviyzf5x066a4q0lj"; depends=[]; }; + JointAI = derive2 { name="JointAI"; version="0.1.0"; sha256="0im17n3w6mhgd2lnjja0ca30b2yz06qn7frcsr9qbbhnc4p7pnv4"; depends=[coda MASS mcmcse rjags]; }; JointModel = derive2 { name="JointModel"; version="1.0"; sha256="1zgs5c7saqyqxvxmhw5sxy5w67abq344aid6igw1da05bfy2az6h"; depends=[lme4 statmod survival]; }; JointRegBC = derive2 { name="JointRegBC"; version="0.1.1"; sha256="0w7ygs3pvlqkkb2x20kv20kda3gz7cn6zgrkg30nhjxp318d76ab"; depends=[MASS nlme survival]; }; Julia = derive2 { name="Julia"; version="1.1"; sha256="0i1n150d89pkds7qyr0xycz6h07zikb2y07d5fcpaqs4446a8prg"; depends=[]; }; - JuliaCall = derive2 { name="JuliaCall"; version="0.12.1"; sha256="1qw5qq35z525wrfrqlawm16bm4p0yzcabp2yzk8piiyhqpd7cma6"; depends=[R6 Rcpp]; }; + JuliaCall = derive2 { name="JuliaCall"; version="0.12.2"; sha256="1408pzvnsxc1mq31b0nf61qc5rby7ymnz3vpkab4xds7kh0fcqh9"; depends=[R6 Rcpp]; }; JumpTest = derive2 { name="JumpTest"; version="0.0.1"; sha256="1d5zmjwmajzdg5d1ws40zchx9wiaav01fby1v3irym2mx30jgbqn"; depends=[MASS Rcpp RcppEigen]; }; JuniperKernel = derive2 { name="JuniperKernel"; version="1.2.3.0"; sha256="17r4ssjjayvnp9fp9jalklp3p8dadyx5hvi9z3bh3sw4b7kx4lyd"; depends=[data_table gdtools jsonlite pbdZMQ Rcpp repr]; }; KANT = derive2 { name="KANT"; version="2.0"; sha256="169j72pmdkcj6hv8qgmc02aps0ppvvl1vnr1hzrb1gsf7zj7bs3y"; depends=[affy Biobase]; }; @@ -1718,9 +1752,9 @@ in with self; { KScorrect = derive2 { name="KScorrect"; version="1.2.3"; sha256="1i69glkyi3ydzfgd8d6zrbgjq7gy9laq00jdppbqnl13i1n14sp7"; depends=[MASS mclust]; }; KSgeneral = derive2 { name="KSgeneral"; version="0.1.0"; sha256="19rrm411c2fvx4bxi9qc6v9spqpf52k08i7gvhici9dx2hhm3134"; depends=[dgof MASS Rcpp]; }; KTensorGraphs = derive2 { name="KTensorGraphs"; version="0.1"; sha256="1hsndxslqgca0ay4q277zjwnwz8bzwfkzz915dgqvjd2v4afrvzx"; depends=[]; }; - KappaGUI = derive2 { name="KappaGUI"; version="2.0.1"; sha256="0l2kgh9bflag5s056ib8fkajl56yr8c0qsmd9ma56i9ay7i540da"; depends=[irr shiny]; }; + KappaGUI = derive2 { name="KappaGUI"; version="2.0.2"; sha256="0vklny804xpd9r60j4a01j2gak8jizwjw0abf7yvbcalv3zbpb3k"; depends=[irr shiny]; }; KappaV = derive2 { name="KappaV"; version="0.3"; sha256="13mmfb8ijpgvzfj20andqb662950lp9g25k5b26r5ba65p7nhva7"; depends=[maptools PresenceAbsence rgeos sp]; }; - KarsTS = derive2 { name="KarsTS"; version="2.0"; sha256="0mha0q5zvijrhrl0nsq229ipf6k2mhw2yqc21vvv8sifh9b9qp4y"; depends=[BaylorEdPsych circular forecast infotheo mgcv missForest MVN nonlinearTseries plot3D rgl stinepack stlplus tcltk2 tkrplot tseries tseriesChaos zoo]; }; + KarsTS = derive2 { name="KarsTS"; version="2.1"; sha256="1kpqp1icrinh8lr72ffcbnbgcxs8865nbmnjfcz5r7lyvhd4lbh9"; depends=[BaylorEdPsych circular forecast infotheo mgcv missForest MVN nonlinearTseries plot3D rgl stinepack stlplus tcltk2 tkrplot tseries tseriesChaos zoo]; }; KenSyn = derive2 { name="KenSyn"; version="0.2"; sha256="19xbdgxafrgxwz7swg7gzrkxszxy7ksgnmz96sar8ysmwrp7dz9i"; depends=[lme4 metafor nlme]; }; Kendall = derive2 { name="Kendall"; version="2.2"; sha256="0z2yr3x2nvdm81w2imb61hxwcbmg14kfb2bxgh3wmkmv3wfjwkwn"; depends=[boot]; }; KernSmooth = derive2 { name="KernSmooth"; version="2.23-15"; sha256="1xhha8kw10jv8pv8b61hb5in9qiw3r2a9kdji3qlm991s4zd4wlb"; depends=[]; }; @@ -1729,7 +1763,7 @@ in with self; { Kernelheaping = derive2 { name="Kernelheaping"; version="2.1.8"; sha256="03m5dwgm98x6ncifyyp2yxln4bm87rkrx84bdihywjd0x73pbklv"; depends=[fastmatch ks magrittr MASS mvtnorm plyr sp sparr]; }; KnapsackSampling = derive2 { name="KnapsackSampling"; version="0.1.0"; sha256="17yzmd11k1n5iy54vbcvpzvkm8ypbl6n1kfi931wwrrcq9y7hg22"; depends=[lpSolve]; }; Knoema = derive2 { name="Knoema"; version="0.1.13"; sha256="10r7gpr39f32h4znmh8kywcs0l2g9ij75qqcyd3ai1fyif54wyqc"; depends=[base64enc digest httr jsonlite lubridate xts zoo]; }; - KnowBR = derive2 { name="KnowBR"; version="1.5"; sha256="18xcdlzr8ipsv4zxmk3424apqrgzgf87h00lwjw5ll2y99vy2ds5"; depends=[fossil mgcv plotrix sp vegan]; }; + KnowBR = derive2 { name="KnowBR"; version="1.7"; sha256="1h5xpj7cqj6130rwsd6bssvwmzc6ldb5wbjgqw7bc588ll1q5rsg"; depends=[fossil mgcv plotrix sp vegan]; }; KoNLP = derive2 { name="KoNLP"; version="0.80.1"; sha256="1chj8kv1l405dm0jcsxjjjxx395z05sfxbcc5vxnpbydx7lxa6zy"; depends=[devtools hash rJava RSQLite Sejong stringr tau]; }; KoulMde = derive2 { name="KoulMde"; version="3.0.0"; sha256="01mczlrdrfwdp2cj10kdqay3qpg8xf2v7vym62pll9l8n595snrl"; depends=[Rcpp]; }; Kpart = derive2 { name="Kpart"; version="1.2.1"; sha256="0jx5rqiw0y9hc1czg75iy4jvd993d7dri90s4iiskbg6x6z65mi9"; depends=[leaps]; }; @@ -1737,7 +1771,7 @@ in with self; { KrigInv = derive2 { name="KrigInv"; version="1.3.1"; sha256="0fcfv2vl572l8qp1ilhjai6zrw15bf1z41qm7xlfspfbj611ga7k"; depends=[DiceKriging pbivnorm randtoolbox rgenoud]; }; L1pack = derive2 { name="L1pack"; version="0.38.19"; sha256="09n1045lsx1ap47mhzcqghmwwhj24kvpjjr3ysprj058jp5g7ri0"; depends=[]; }; LAGOSNE = derive2 { name="LAGOSNE"; version="1.1.0"; sha256="08sf4mm40gv9mr57pxsl1b62s2dqvbvrhy2irzqspyqk5ai2aw0m"; depends=[curl dplyr lazyeval magrittr purrr rappdirs sf stringr]; }; - LAM = derive2 { name="LAM"; version="0.1-22"; sha256="0gj4j5yqyllxbhz6iayh0w473hzq0xc1r9dlyxhh67k9mg951phb"; depends=[CDM coda Rcpp RcppArmadillo sirt]; }; + LAM = derive2 { name="LAM"; version="0.2-9"; sha256="0znkh25aa2vv3h3rfqdaadk58c2p7rwfw8xx5i8fs6dzyvx6c99l"; depends=[CDM coda Rcpp RcppArmadillo sirt TAM]; }; LANDD = derive2 { name="LANDD"; version="1.1.0"; sha256="13szkww9nw8zywfrqd8mwgj9csgragm0bx8ia52rcpakpc3hv3hx"; depends=[BH doParallel fdrtool foreach GGally ggplot2 GOSemSim GOstats igraph intergraph Matrix modeest mvtnorm pROC Rcpp]; }; LARF = derive2 { name="LARF"; version="1.4"; sha256="1sqib7smgjacn07ishwls1nlbvcb6fpp1vhrjwf9g4xf9jk30i8h"; depends=[Formula]; }; LBSPR = derive2 { name="LBSPR"; version="0.1.2"; sha256="09jvdjagf4icnigbfw18z36ya4llg84fa6j2khd22cl60y81r5i3"; depends=[dplyr ggplot2 gridExtra plotrix RColorBrewer Rcpp shiny tidyr]; }; @@ -1753,7 +1787,7 @@ in with self; { LDPD = derive2 { name="LDPD"; version="1.1.2"; sha256="1khdx8vwlpliyjc4sxcdiywbxl8lc9f5s3457vcip1j8dv537lbm"; depends=[MASS nleqslv]; }; LDRTools = derive2 { name="LDRTools"; version="0.2-1"; sha256="05srfyplsypi3whfa71lx7pnad23irpf0p7rxmrpv28jgdmrz6wf"; depends=[]; }; LDcorSV = derive2 { name="LDcorSV"; version="1.3.2"; sha256="0lvk3xz400yd3w0cjdfi6hir1ym1mffd504vycwgck5fkzljpcvx"; depends=[]; }; - LDheatmap = derive2 { name="LDheatmap"; version="0.99-2"; sha256="0n80l4wl9rs4ps8h2bjpar5nidq7bg05d6675wiwanx24q6fc0bs"; depends=[chopsticks genetics]; }; + LDheatmap = derive2 { name="LDheatmap"; version="0.99-4"; sha256="1xdvpydnrlzb6q4hm0rcflf0vysww1xszj6ynly6a32xqmhg0sbq"; depends=[genetics snpStats]; }; LDtests = derive2 { name="LDtests"; version="1.0"; sha256="1jwqr7zlp9hv7vw8xp80xvrwbdv796wjgr914v393wfa07j5wbd1"; depends=[]; }; LEANR = derive2 { name="LEANR"; version="1.4.9"; sha256="053xy13ys5hibafdnbkwqdk36hw7dhanp4frfacpfpn5f9nfh95r"; depends=[foreach igraph]; }; LEAP = derive2 { name="LEAP"; version="0.2"; sha256="1yrhanxvr7krvllqzv17qkc4wvmd7mgl57am8sn53773dbfipfc4"; depends=[]; }; @@ -1775,23 +1809,25 @@ in with self; { LMest = derive2 { name="LMest"; version="2.4.2"; sha256="0a0azn3lyy0n1882c0zxf7f1b0h26rcck8mmsbh2wxg7r3nckkrd"; depends=[MASS MultiLCIRT]; }; LMfilteR = derive2 { name="LMfilteR"; version="0.1.1"; sha256="0wjrnzki6mnar3lxfr2mcvk98b58qkqpbb9xx7vgrw567g1ga1ig"; depends=[MASS]; }; LN0SCIs = derive2 { name="LN0SCIs"; version="0.1.5"; sha256="09zr6lrvv7lw9qp3vz4n2dv0v3q7wq06wwvwpb2pm0r335bnrf89"; depends=[]; }; - LNIRT = derive2 { name="LNIRT"; version="0.2.0"; sha256="02gaqn2pixry6qgybwszsv60pk6hzdd51axchkq3ma3gb6biw4fv"; depends=[MASS]; }; + LNIRT = derive2 { name="LNIRT"; version="0.3.0"; sha256="1xlfk3a0x8abs6xwsm9s50nvi53s1a7nhnskhvjbi3rdzkvkrwxl"; depends=[MASS]; }; LOGICOIL = derive2 { name="LOGICOIL"; version="0.99.0"; sha256="1wgg7kigzzk5ghjn3hkjf1bb8d6mvjfmkwq64phri5jpxd742ps9"; depends=[nnet]; }; LOGIT = derive2 { name="LOGIT"; version="1.3"; sha256="1nx9ycrys0p08xr1n7bqgn47k5wz1zbp6w5pwsqk5c6f6did2rs1"; depends=[caret e1071 ggplot2 MASS pROC reshape]; }; LOST = derive2 { name="LOST"; version="1.3"; sha256="01ymnczsnfml04hb6hbi041khkz2aki78qr3hriw7n3bzs5i7xim"; depends=[e1071 gdata MASS miscTools pcaMethods rgl shapes]; }; LPCM = derive2 { name="LPCM"; version="0.45-0"; sha256="15gpb59556s28npdsw1r821rld7b11y1m2m97m320n9k0z4vbk3i"; depends=[]; }; + LPGraph = derive2 { name="LPGraph"; version="1.0"; sha256="0hbcllrvjsgkapkf28957y47jrhajrk7j67iw36bxpbb25xfvl7i"; depends=[car SDMTools]; }; LPKsample = derive2 { name="LPKsample"; version="1.0"; sha256="0vxps8zd9zg1aw4p2qd8wamcjkbl68yvppnlvshm2ry5dahwz1wk"; depends=[apcluster igraph mclust]; }; LPM = derive2 { name="LPM"; version="2.7"; sha256="1anjgflj1272xrghn3s9a21f2dfggppnzjqh3p8zaid91bzg0g34"; depends=[fracdiff MASS QRM]; }; LPR = derive2 { name="LPR"; version="1.0"; sha256="16kmfm6p7cwnzpd054ik0cy0ipif6zssdfyxyfm0cijz8z4z40x7"; depends=[doParallel foreach glmnet iterators lattice Matrix slam]; }; LPS = derive2 { name="LPS"; version="1.0.10"; sha256="0gf3jmhfki01z8fm5xdx59gxvhgzqd10x2iwa8369iz9dvwbjk8j"; depends=[]; }; LPStimeSeries = derive2 { name="LPStimeSeries"; version="1.0-5"; sha256="0jmcy8076w4bzfnxaq2m3s60c1wdmywkwzfyrc19wdm8idf666wh"; depends=[RColorBrewer]; }; LPTime = derive2 { name="LPTime"; version="1.0-2"; sha256="08lb6884kj9pg12mzx67fdnqb86x5s6yzb72hh3nrz50awj1f8nn"; depends=[orthopolynom]; }; + LPWC = derive2 { name="LPWC"; version="0.99.2"; sha256="1cir7w4rrpw7iqc1waf5aijk41hl19mdg1q7ml7mi0js88xy0a0y"; depends=[]; }; LPmerge = derive2 { name="LPmerge"; version="1.6"; sha256="0xc06s2p7n151lzrp0dcrrxk8zmd816dc7qbnbcail5c1bhvdqhd"; depends=[Matrix Rglpk]; }; LRTH = derive2 { name="LRTH"; version="1.3"; sha256="08vakwb7ca7956gifynzijka441yyx0wd5bq5jfhz56lzcxgfb99"; depends=[]; }; LRcontrast = derive2 { name="LRcontrast"; version="1.0"; sha256="0fs06p853r42nws2camvs87py39hb1ssxhfm6d5n9kkq81snfx4q"; depends=[DoseFinding]; }; LS2W = derive2 { name="LS2W"; version="1.3-3"; sha256="0pdsv7ld0j116rh94m5y1i2mwrzc80fqxmc6ykc51i1sj6ws3i5k"; depends=[wavethresh]; }; LS2Wstat = derive2 { name="LS2Wstat"; version="2.0-3"; sha256="0wkh1a6xbp3qg5favxsj166jcgdza16zki675gswxckana6s4is7"; depends=[geoR LS2W matrixStats RandomFields spdep]; }; - LSAfun = derive2 { name="LSAfun"; version="0.5.1"; sha256="0wj2j53jizg014sppag9zbs5hzc3mvpg1fx1s7l4ff6rabhgvlff"; depends=[lsa rgl]; }; + LSAfun = derive2 { name="LSAfun"; version="0.5.2"; sha256="114qhnx4dr7ywh3fzkjd35xygpnn74g5nv66ahj7hf5w0gg13ws9"; depends=[lsa rgl]; }; LSAmitR = derive2 { name="LSAmitR"; version="1.0-1"; sha256="0p1j4q1b7488wbwl2c9py6ldq2j7ri1dvnmmknx5lwvzv0xsawsd"; depends=[Hmisc lme4]; }; LSC = derive2 { name="LSC"; version="0.1.5"; sha256="1nlnwqb24sbgvl96azh8a833ij5xknjr2wr8shs59lm2n63a3ql9"; depends=[fields gam LICORS Matrix RColorBrewer]; }; LSD = derive2 { name="LSD"; version="4.0-0"; sha256="0fsp3pwrnnic9mzkd6yxa4bnxbvg68712lb20vd42wf6jb39r2h3"; depends=[]; }; @@ -1803,7 +1839,7 @@ in with self; { LSTS = derive2 { name="LSTS"; version="1.0"; sha256="1vgdqyj6k50gqfffqfb4n3sw27jrq21nl2h8sz8942w4a8fn7sgv"; depends=[]; }; LTPDvar = derive2 { name="LTPDvar"; version="1.2"; sha256="0r9v5g5y9n85jdcvm7zpapm73ism48m3mmybpcmgcs028h2ndv7v"; depends=[]; }; LTR = derive2 { name="LTR"; version="1.0.0"; sha256="15g5hbrwhab80sarbjgwzvsn6c4fl18h014kz5fpzf0n1rijybik"; depends=[]; }; - LTRCtrees = derive2 { name="LTRCtrees"; version="1.0.0"; sha256="08wkhd7sqk0q9sahg6bd1m2xgl5yk9ldvripa6vyps0nni1h8lb6"; depends=[interval inum partykit rpart survival]; }; + LTRCtrees = derive2 { name="LTRCtrees"; version="1.1.0"; sha256="07mvbk3hwl240r46ahha0a4fzq96awk963zl8dhky51b6abp83gz"; depends=[icenReg inum partykit rpart survival]; }; LVMMCOR = derive2 { name="LVMMCOR"; version="0.01.1"; sha256="1lq4hqcg0qkywdr4a22m1fr3m97749mm6n2jzdj9i7jrf0agc1fs"; depends=[MASS nlme]; }; LW1949 = derive2 { name="LW1949"; version="1.1.0"; sha256="147ymp7j98ihp1dcz3p5v9ar6h767phjdnga5q5vf1wwa2mxawg7"; depends=[MASS mgcv plotrix]; }; LZeroSpikeInference = derive2 { name="LZeroSpikeInference"; version="1.0.3"; sha256="15x29afaq13iwlj66h97k3kczg9rfgp6i9d76rji58hfgh8i8by6"; depends=[]; }; @@ -1825,9 +1861,10 @@ in with self; { LeLogicielR = derive2 { name="LeLogicielR"; version="1.2"; sha256="0h52pzrksi1mn55mnxbfi61hl7x61cnkhp450slfrk68f6kp30x6"; depends=[gdata IndependenceTests RColorBrewer xtable]; }; LeafAngle = derive2 { name="LeafAngle"; version="1.2-1"; sha256="0g3i5300f3rvjz7g7z8s5n8xdcsp41gf1vnr4g36m1likddfpxlx"; depends=[]; }; LeafArea = derive2 { name="LeafArea"; version="0.1.7"; sha256="0pn6hh9ipr609pi49ls8wxnx7v8q1wyp84i22zzwxyzwaap5nmj2"; depends=[]; }; - LearnBayes = derive2 { name="LearnBayes"; version="2.15"; sha256="0cz2rgqy1cmdz2h1qbdvfqxmmdzmg2z1scdlxr7k385anha13ja5"; depends=[]; }; + LearnBayes = derive2 { name="LearnBayes"; version="2.15.1"; sha256="0ch54v2zz2yyyk0lvn5rfikdmyz1qh9j1wk3585wl8v58mc0h4cv"; depends=[]; }; LearnGeom = derive2 { name="LearnGeom"; version="1.3"; sha256="0fqf5k3gsdxwyfcbkypqiq0ir8ay8r9bdy8iljhj308ammq0mxzk"; depends=[RgoogleMaps]; }; LendingClub = derive2 { name="LendingClub"; version="1.0.4"; sha256="03pgarbraj6in7pk7zaci98aq6dh52vsqb64my5p0bczgl2cpzmm"; depends=[dplyr httr jsonlite plyr]; }; + LexisNexisTools = derive2 { name="LexisNexisTools"; version="0.1.2"; sha256="0ziy86l6q01l471lmpldhs48xqlyw1va75np5hkzaq5wapr9pfk4"; depends=[data_table quanteda scales stringdist stringi]; }; LexisPlotR = derive2 { name="LexisPlotR"; version="0.3"; sha256="1qdgs6p11j0ign27bbnn32g65sw42982ijrig5cwqsdvxpdabjl8"; depends=[ggplot2]; }; LiblineaR = derive2 { name="LiblineaR"; version="2.10-8"; sha256="17ykazac7iv02bxl8xg948vhbdr32icdm1v4bk31zmslp4xsk08g"; depends=[]; }; LiblineaR_ACF = derive2 { name="LiblineaR.ACF"; version="1.94-2"; sha256="1ldkb63yhm1ki8i585wp5byx6y0kvclwy3ncacgcdqqk0p41cyi6"; depends=[]; }; @@ -1851,7 +1888,7 @@ in with self; { LocalControl = derive2 { name="LocalControl"; version="1.1.0"; sha256="0hfm8lllsg5h95ib0h89hbhwcnk2959y9i3kllwmxhmqbirvlpx9"; depends=[cluster gss lattice Rcpp]; }; Lock5Data = derive2 { name="Lock5Data"; version="2.8"; sha256="17awskq78h23z2dy96d7hziljhnkx5phpd48q7cppxidyvzfywim"; depends=[]; }; Lock5withR = derive2 { name="Lock5withR"; version="1.2.2"; sha256="10x3i11pb4cig4pgfmw9984na5zjbg7d41y6crakiimf53ihx0c2"; depends=[]; }; - LogConcDEAD = derive2 { name="LogConcDEAD"; version="1.5-9"; sha256="135vkp70q6gn75ds43aq08y13vrsgsgykssmnhrh6545i86vmhhi"; depends=[MASS mvtnorm]; }; + LogConcDEAD = derive2 { name="LogConcDEAD"; version="1.6-1"; sha256="1hy7fnahncpsgqxfy352lxk298i69w7drlspsgdvpzdbghca3y3i"; depends=[MASS mclust mvtnorm rgl tkrplot]; }; LogicForest = derive2 { name="LogicForest"; version="2.1.0"; sha256="0zdyyi6wka0568414f1kw91rx04y76n1k11wxd4r8svb5wybjhp5"; depends=[CircStats gtools LogicReg plotrix]; }; LogicReg = derive2 { name="LogicReg"; version="1.5.9"; sha256="0rxzhbf51psdj7wb2dcah16y8f5q7y8p0yybz54rm00d1qagl6nq"; depends=[survival]; }; LogisticDx = derive2 { name="LogisticDx"; version="0.2"; sha256="0ciygvynnyajpn1glxy6mwj9vbl7iv8a8dfsi6wxjxp2rac68rig"; depends=[aod data_table pROC RColorBrewer rms speedglm statmod]; }; @@ -1863,10 +1900,10 @@ in with self; { LowWAFOMNX = derive2 { name="LowWAFOMNX"; version="1.1.1"; sha256="0f75qsv6pisgvk39yagzfxscnyfsgh63rmhp4gpybpl0pqmjp48x"; depends=[Rcpp RSQLite]; }; LowWAFOMSobol = derive2 { name="LowWAFOMSobol"; version="1.1.1"; sha256="1ym3i2m1am356di9lcp5nfmxq0np3c4bwsv6bbmf7hg02j7dhwi4"; depends=[Rcpp RSQLite]; }; LumReader = derive2 { name="LumReader"; version="0.1.0"; sha256="1h2r3c9xkwlnaicn65085bdx7y86ha2fpd5mxirqax5lm6d8lirc"; depends=[gridExtra lattice plotly shiny]; }; - Luminescence = derive2 { name="Luminescence"; version="0.8.2"; sha256="0fk7vmgp0ws31azl7hazx925ddksqfgsmfwz2akfhbzi1y4bys3m"; depends=[bbmle data_table httr magrittr matrixStats minpack_lm plotrix raster Rcpp RcppArmadillo readxl shape XML zoo]; }; + Luminescence = derive2 { name="Luminescence"; version="0.8.3"; sha256="0mrmxz5b1px44h50ai25lza67k2ji78sdi1b6nd373kpmix5kxa1"; depends=[bbmle data_table httr magrittr matrixStats minpack_lm plotrix raster Rcpp RcppArmadillo readxl shape XML zoo]; }; M3 = derive2 { name="M3"; version="0.3"; sha256="1l40alk166lshckqp72k5zmsgm7s5mgyzxlp11l64mgncjwkw2r3"; depends=[mapdata maps ncdf4 rgdal]; }; MADPop = derive2 { name="MADPop"; version="1.1"; sha256="1w2jbiki6d14y32p8a50b8g53m1iva2kgik14yg27z5hx1rwwq97"; depends=[BH Rcpp RcppEigen rstan StanHeaders]; }; - MAGNAMWAR = derive2 { name="MAGNAMWAR"; version="2.0.2"; sha256="11031gmc6zrhn6vdzza4qqvwc48h09kbvkikqznqr9hhkysv7c11"; depends=[ape coxme doParallel dplyr foreach iterators lme4 multcomp plyr qqman seqinr survival]; }; + MAGNAMWAR = derive2 { name="MAGNAMWAR"; version="2.0.3"; sha256="0xv4ldyjp6pa2jk81al5ldvm72ywzb9fmwim8l97xcbydm5wxjcx"; depends=[ape coxme doParallel dplyr foreach iterators lme4 multcomp plyr qqman seqinr survival]; }; MAINT_Data = derive2 { name="MAINT.Data"; version="1.2.1"; sha256="0fmlmb88005diqwbxlgkzzb7bvxpdkiqiadp649id3mgcz100kcd"; depends=[MASS mclust miscTools pcaPP Rcpp RcppEigen robustbase rrcov sn]; }; MALDIquant = derive2 { name="MALDIquant"; version="1.17"; sha256="047s6007ydc38x8wm027mlb4mngz15n0d4238fr8h43wyll5zy0z"; depends=[]; }; MALDIquantForeign = derive2 { name="MALDIquantForeign"; version="0.11.1"; sha256="1aj6gakhbpis576b264s43w55dhmd5rszj54z910plybxq8hzmir"; depends=[base64enc digest MALDIquant readBrukerFlexData readMzXmlData XML]; }; @@ -1878,7 +1915,7 @@ in with self; { MAPA = derive2 { name="MAPA"; version="2.0.4"; sha256="02s223s58k2jk49m0xlz3q9m3nip3h4dl4v58j18z2vgi54dwnjr"; depends=[forecast RColorBrewer smooth]; }; MAPLES = derive2 { name="MAPLES"; version="1.0"; sha256="0hzsh7z1k7qazpxjqbm9842zgdpl51irg7yfd119a7b2sd3a8li9"; depends=[mgcv]; }; MAR1 = derive2 { name="MAR1"; version="1.0"; sha256="1r6j890icl5h3m2876sakmwr3c65513xnsj68sy0y0q7xj3a039l"; depends=[bestglm leaps]; }; - MARSS = derive2 { name="MARSS"; version="3.9"; sha256="0vn8axzz0nqdcl3w00waghz68z8pvfm764w11kxxigvjpw2plj31"; depends=[KFAS mvtnorm nlme]; }; + MARSS = derive2 { name="MARSS"; version="3.10.8"; sha256="1cmkish5rbv7lpm8fnv6d33plkfvxis4r4p48bx10fll1ba11m7h"; depends=[KFAS mvtnorm nlme]; }; MARX = derive2 { name="MARX"; version="0.1"; sha256="1yanv7q5l8ybw3mh0rvhxyqi2sp8w4b9vnas7lpqflc06j4nnv4p"; depends=[fBasics matlab stabledist tseries]; }; MASS = derive2 { name="MASS"; version="7.3-49"; sha256="1yjbnj1p4z0vw84wga8q5fyqiw4n6r7pc6rdwam7vsbiamyzfcqs"; depends=[]; }; MASSTIMATE = derive2 { name="MASSTIMATE"; version="1.3"; sha256="0dsqinl6998jv63m6scljszpi0qb050gj5d4wnp0pcxfs9awi2gj"; depends=[]; }; @@ -1898,11 +1935,12 @@ in with self; { MBHdesign = derive2 { name="MBHdesign"; version="1.0.79"; sha256="1qz0igm8h3ij8yc9bg3vr3mkmf99h1kyxscdhkfphc66zaazhyw1"; depends=[class geometry mgcv mvtnorm randtoolbox]; }; MBI = derive2 { name="MBI"; version="1.0"; sha256="1lb0sjwa6x360n9a9pagz6yhxh37gxq1fk0f5c3i2sd56ny9jpns"; depends=[]; }; MBSGS = derive2 { name="MBSGS"; version="1.1.0"; sha256="1h5vhmpgrqza12j7ivhwgd5wyb7kkb8mjbxl5w756vyid8g03flz"; depends=[MASS MCMCpack mgcv mnormt truncnorm]; }; + MBSP = derive2 { name="MBSP"; version="1.0"; sha256="0mds6jfqgmnm4saqqqqqfcg8zh4qsvd2503g3ij1sn70f0aakwaj"; depends=[coda GIGrvg MASS Matrix MCMCpack]; }; MBTAr = derive2 { name="MBTAr"; version="1.0.1"; sha256="0zak19pdk0wwkhl4kj1jbwx0qmqcgpmmqv3vk0wg8nwgf1l65idy"; depends=[jsonlite]; }; MBmca = derive2 { name="MBmca"; version="0.0.3-5"; sha256="0p7ddpsy4hwkfwyyszidi33qpdg4xllny7g9x24gk782p7kjfgq9"; depends=[chipPCR robustbase]; }; MC2toPath = derive2 { name="MC2toPath"; version="0.0.16"; sha256="0jdn9wpxavn2wrml907v23mfxr62wwjdh7487ihjj59g434ry7wh"; depends=[RNetCDF]; }; MCAvariants = derive2 { name="MCAvariants"; version="2.0"; sha256="0akff64v49d5r0wvspal0pz17jhz1ry4vdmj47m28gzjj69zcab0"; depends=[]; }; - MCDA = derive2 { name="MCDA"; version="0.0.18"; sha256="1m8kf8xxli3dbbabrcanpsmsmywf21ma0nb9jq2phz7ifgladdyi"; depends=[combinat glpkAPI RColorBrewer Rglpk]; }; + MCDA = derive2 { name="MCDA"; version="0.0.19"; sha256="0r8l6q5aisjfk0xpv4pyccnngjlkm3978lba62rspd9kyhjlz64n"; depends=[combinat glpkAPI RColorBrewer Rglpk]; }; MCDM = derive2 { name="MCDM"; version="1.2"; sha256="0r27y9mqvfnv1m0yi2xdyjr4y1s43d5yav960kz2xa732hrrxw01"; depends=[RankAggreg]; }; MCI = derive2 { name="MCI"; version="1.3.3"; sha256="1wn8lcr5sq3697nsmly6syb9jv7p99ks0fy933ff5rx54x3rf9hz"; depends=[]; }; MCL = derive2 { name="MCL"; version="1.0"; sha256="1w36h4vhd525h57pz6ik3abbsrvxnkcqypl2aj1ijb6wm7nfp4ri"; depends=[expm]; }; @@ -1911,9 +1949,9 @@ in with self; { MCMC4Extremes = derive2 { name="MCMC4Extremes"; version="1.1"; sha256="06p6xdbja7vrdq4vnhybpkmyf4rkaihcmy9sc81sb0h2wa21vcq0"; depends=[evir]; }; MCMCglmm = derive2 { name="MCMCglmm"; version="2.25"; sha256="0crici0g6x2471kk9092f72gc6ghbwwqid3w8jsnsvy6ymmk2wih"; depends=[ape coda corpcor cubature Matrix tensorA]; }; MCMCpack = derive2 { name="MCMCpack"; version="1.4-2"; sha256="1nizmfxyyrp0sbmyprgm97xmi3amxwix1gj7p9v0sjjklv1djap4"; depends=[coda lattice MASS mcmc quantreg]; }; - MCMCprecision = derive2 { name="MCMCprecision"; version="0.3.7"; sha256="0pbyg6v478di1w9cpp2rmhr4p5ncnwmks042981snqc5gnwysjx4"; depends=[combinat Matrix Rcpp RcppArmadillo RcppEigen RcppProgress]; }; - MCMCvis = derive2 { name="MCMCvis"; version="0.9.4"; sha256="0pfj14pji0dqzlq6vy76prkh8m0hj784yjr5lz3p68kviwzrk9r6"; depends=[coda overlapping rstan]; }; - MCPAN = derive2 { name="MCPAN"; version="1.1-20"; sha256="0j36dhi3bf3q14bbcmrmipz2fcn6g9gsqidzm43i8x5r7hcvv2lh"; depends=[magic MCMCpack multcomp mvtnorm plyr]; }; + MCMCprecision = derive2 { name="MCMCprecision"; version="0.3.8"; sha256="1qyhxljfcnyj7450vik4j81qilvphwc1b2xv48fnx1pnapfl45wz"; depends=[combinat Matrix Rcpp RcppArmadillo RcppEigen RcppProgress]; }; + MCMCvis = derive2 { name="MCMCvis"; version="0.10.0"; sha256="1yw4xrbkl2mdylvibnqy14v211a1h5knqgpp0syplvjaysjk9irm"; depends=[coda overlapping rstan]; }; + MCPAN = derive2 { name="MCPAN"; version="1.1-21"; sha256="0q1m0xg8825q9zjwxcz2h2n0dyr21q5bk29qbqpdhirlwm6f1a51"; depends=[magic MCMCpack multcomp mvtnorm plyr]; }; MCPMod = derive2 { name="MCPMod"; version="1.0-10"; sha256="0ns74qhm9bzi70m9bn61zs4mmqmmxxi77f49pdrcnr8wrrnn1kdn"; depends=[lattice mvtnorm]; }; MCPerm = derive2 { name="MCPerm"; version="1.1.4"; sha256="0g65vzn43k6qrsglxd2kz245f662gl3c2gdz6qvvxa96v6q9lhh1"; depends=[metafor]; }; MCS = derive2 { name="MCS"; version="0.1.3"; sha256="1kiz1jq1bm2n8f33nsybp5jfrzzl9xbsi3m9l8818ybmph99xms6"; depends=[]; }; @@ -1927,6 +1965,7 @@ in with self; { MDSMap = derive2 { name="MDSMap"; version="1.0"; sha256="15557ca83bvsqcmsa48vispagg9a05658i22cqk706shjsp782n5"; depends=[princurve reshape rgl smacof]; }; MDimNormn = derive2 { name="MDimNormn"; version="0.8.0"; sha256="080m0irx5v8l45fg9ig5yzcj92s3ah8a9aha288byszli1cchgpn"; depends=[]; }; MDplot = derive2 { name="MDplot"; version="1.0.1"; sha256="1xijh18hrkb807nfkdr7g642aspn5psc8nw29q387jl5hly2w8s9"; depends=[gplots gtools MASS RColorBrewer]; }; + MED = derive2 { name="MED"; version="0.1.0"; sha256="0fy0qmxirkdz5kigy2r7l5czjzws0fhjxy13kv1kqh628ldrp109"; depends=[]; }; MEET = derive2 { name="MEET"; version="5.1.1"; sha256="02xz2zkwqaf1wck9a3h1j6z8dasw4j0zqa88jg6h10wqzcrlp9ba"; depends=[Hmisc KernSmooth Matrix pcaMethods ROCR seqinr seqLogo]; }; MEGENA = derive2 { name="MEGENA"; version="1.3.6"; sha256="0ylv7kbk0x3rm08aiwci4p3kma08qj4szlw2h1d6wcqmipy93v8s"; depends=[BH cluster doParallel foreach fpc ggplot2 ggrepel igraph Matrix Rcpp reshape]; }; MEMSS = derive2 { name="MEMSS"; version="0.9-2"; sha256="0wyw8yjs4miwgwdfcnfbzvkxrgv5r3jlg3cg8q2vy7s69wvhksmy"; depends=[lme4]; }; @@ -1936,6 +1975,7 @@ in with self; { MExPosition = derive2 { name="MExPosition"; version="2.0.3"; sha256="1l27wp0psfvlkk79fhb8ypf8awardjljg1f37yj42friy9pdfksz"; depends=[ExPosition prettyGraphs]; }; MF = derive2 { name="MF"; version="4.3.2"; sha256="1arnhyqf1cjvngygcpqk2g4d52949rhkjmclbaskyxcrvp62qln0"; depends=[]; }; MFAg = derive2 { name="MFAg"; version="1.4"; sha256="092zbl2pxbsvfyf3qssbid14194p0ax2zrw0gzpyqwzdpx0brrlb"; depends=[]; }; + MFDFA = derive2 { name="MFDFA"; version="1.0"; sha256="1gy1v49525i2bhr14nvpz8rqcz3lchfnvm0g53qlln55jdndgsx4"; depends=[]; }; MFHD = derive2 { name="MFHD"; version="0.0.1"; sha256="0gb8y297y1x03wy46530psmlawyv4z5dydilk36qcmadlk1wx02k"; depends=[deldir depth depthTools fda_usc matrixStats]; }; MFKnockoffs = derive2 { name="MFKnockoffs"; version="0.9.1"; sha256="1bcdqfzmllp3dri1phy365wgc9c37wlag65pzljn4p3mf43w10nq"; depends=[corpcor glmnet gtools Matrix Rdsdp RSpectra]; }; MFT = derive2 { name="MFT"; version="1.3"; sha256="029apjg1fqrqfg98jczbxfy267m3f68qxvxqjzbsw1xisq4j7wc0"; depends=[]; }; @@ -1944,6 +1984,7 @@ in with self; { MGRASTer = derive2 { name="MGRASTer"; version="0.9"; sha256="0jmf2900r56v60981sabflkhid3yrqd9xd7crb56vgfl1qkva9zp"; depends=[]; }; MGSDA = derive2 { name="MGSDA"; version="1.4"; sha256="0grwl740yvz2av5nkvmyyrr8ji5f39sjs1c5gxp6lp9p36i2wc32"; depends=[MASS]; }; MHCtools = derive2 { name="MHCtools"; version="1.1.0"; sha256="03y6m3a46bzazxkrxdrii2p1fyc26il09z5676c63rk8wz9wcxa0"; depends=[rlist]; }; + MHTcop = derive2 { name="MHTcop"; version="0.1.0"; sha256="1fhi7inv8zf3ygj4pf8am445ldq9qpwzi3ll4xqwz8d4s6ajx405"; depends=[copula matrixStats MCMCpack mvtnorm stabledist]; }; MHTdiscrete = derive2 { name="MHTdiscrete"; version="1.0.0"; sha256="0w1hxa3qk8glijhc4h1wrl5xw54zflibgilhs1w872w9wrkxs5ih"; depends=[]; }; MHTmult = derive2 { name="MHTmult"; version="0.1.0"; sha256="1y3vh2kab6nfkiz4nzdhrpy9h6drk1ibfd2h62hpr3y09z9a2yld"; depends=[]; }; MHTrajectoryR = derive2 { name="MHTrajectoryR"; version="1.0.1"; sha256="13idcjx7pjpwvr4c52938yqhhaj1gprb8hjhaim3jx4062wf9pla"; depends=[mgcv]; }; @@ -1954,6 +1995,7 @@ in with self; { MIIVsem = derive2 { name="MIIVsem"; version="0.5.2"; sha256="0i144v2qjqb26vjym1lh3hbikm882hrwx6kz2ajrica59gyryr37"; depends=[boot car lavaan Matrix numDeriv]; }; MILC = derive2 { name="MILC"; version="1.0"; sha256="14xsiw5al6kixwvf3ph0dlm8s13gsbqvzb92da6ng3x4iiyb1g0w"; depends=[]; }; MIPHENO = derive2 { name="MIPHENO"; version="1.2"; sha256="0hcaq66biv4izszdhqkgxgz91mgkjk1yrwq27fx07a2zmzj44sfv"; depends=[doBy gdata]; }; + MIRL = derive2 { name="MIRL"; version="1.0"; sha256="1l52zpd00rm77vlk4lgnlviz18f7079a4n1gvlmr5syib7cvhfxs"; depends=[boot glmnet MASS mice]; }; MIXFIM = derive2 { name="MIXFIM"; version="1.0"; sha256="0m4fnmdd8lsdxq629f87lzz1cdc1q0j3q9hqna85ncpflyfwlvg9"; depends=[ggplot2 mvtnorm rstan]; }; MImix = derive2 { name="MImix"; version="1.0"; sha256="033gxr0z2xba0pgckiigblb1xa94wrfmpgv3j122cdynjch44j4r"; depends=[]; }; MInt = derive2 { name="MInt"; version="1.0.1"; sha256="1nk02baainxk7z083yyajxrnadg2y1dnhr51fianibvph1pjjkl6"; depends=[glasso MASS testthat trust]; }; @@ -2016,7 +2058,7 @@ in with self; { MSIseq = derive2 { name="MSIseq"; version="1.0.0"; sha256="1v2why1k6pjsc04044nr74571p7541nciq7xkzmya3jq6dw878j3"; depends=[IRanges R_utils rJava RWeka]; }; MSQC = derive2 { name="MSQC"; version="1.0.2"; sha256="11wcy04cpjlnc71s2svs4lm1cp718dz1p4a1603x6zwpbf22bygn"; depends=[rgl]; }; MST = derive2 { name="MST"; version="2.1"; sha256="16mnsn2an02k4jrqb6yj0n1i563zny5v10ngfq1y28fqaw6h8yyq"; depends=[Formula MASS partykit survival]; }; - MSbox = derive2 { name="MSbox"; version="1.0"; sha256="0r6bvw7ddb8lvz5cjvcng9vkc6pn765xgd4bws594jyc0avm0jkx"; depends=[stringr]; }; + MSbox = derive2 { name="MSbox"; version="1.1"; sha256="0hal7cqfmmcsckysxnwr2qsa2b61ck4zgbdl52w1iqkkvm8qq1x9"; depends=[stringr]; }; MScombine = derive2 { name="MScombine"; version="1.1"; sha256="0kgz1l4jlhcada3fp02dscf4zx6a22cjxj251838lfz65f512hrn"; depends=[plyr]; }; MSeasy = derive2 { name="MSeasy"; version="5.3.3"; sha256="191mvg1imxfjlnd808ypn4lsjx7n6ydf16flax79hv01z7rcjylh"; depends=[amap cluster clValid fpc mzR xcms]; }; MSeasyTkGUI = derive2 { name="MSeasyTkGUI"; version="5.3.3"; sha256="0ihz8vr2wbgy88bzssilgvlhkbr13jznfjvnqy73wpchqgwy0wy6"; depends=[MSeasy]; }; @@ -2033,14 +2075,14 @@ in with self; { MVA = derive2 { name="MVA"; version="1.0-6"; sha256="09j9frr6jshs6mapqk28bd5jkxnr1ghmmbv6f4zz0lrg81zjizl3"; depends=[HSAUR2]; }; MVB = derive2 { name="MVB"; version="1.1"; sha256="0an8b594rknlcz6zxjva6br8f34sgwdi2jil3xh1xzb5fa55dw0f"; depends=[Rcpp RcppArmadillo]; }; MVLM = derive2 { name="MVLM"; version="0.1.4"; sha256="1zcj405dc4jbiqw6p0fcbam8yc9d6yjpmrx5wjw5zjvig3iqb91k"; depends=[CompQuadForm]; }; - MVN = derive2 { name="MVN"; version="5.0"; sha256="1rpb9hxi4g87h6gvg6qdvk3f208cdayikmb8ib499ax3wv1zszhy"; depends=[boot energy kableExtra magrittr MASS moments mvoutlier nortest plyr psych robustbase]; }; - MVR = derive2 { name="MVR"; version="1.32.0"; sha256="18arp9xh9dflbmc5zxafy132mnz5xwc6kb9hv51njz602kms70qg"; depends=[statmod]; }; + MVN = derive2 { name="MVN"; version="5.1"; sha256="1w0q42yqh6c0yl2mkcpn28da59i5svrqg18z2dndnxhvyl46ij3d"; depends=[boot energy kableExtra magrittr MASS moments mvoutlier nortest plyr psych robustbase]; }; + MVR = derive2 { name="MVR"; version="1.32.1"; sha256="03dbd5nib8cx0rwdi4g9fihbkdxazpvbdjh7sfnavsyyrgnqa31m"; depends=[statmod]; }; MVT = derive2 { name="MVT"; version="0.3"; sha256="0vinlv3d5daf8q7pd9xgs51nxz2njgdba5750vygmv883srlzi9d"; depends=[]; }; MVar_pt = derive2 { name="MVar.pt"; version="1.9.9"; sha256="1lhy66k9x9ymj03d4f7wi6rdx60bwgy6gfv49jq3vr4cj8dv22i9"; depends=[]; }; MVisAGe = derive2 { name="MVisAGe"; version="0.2.0"; sha256="18w3qf85l81sbxhzxs61jbsng14lbd8vzvbprq0ywkxb2lsq16n2"; depends=[]; }; MWLasso = derive2 { name="MWLasso"; version="1.3.1"; sha256="11lyk46lmjcd60q0mixi41b8ybjgyp1xi18g3ag4450xyhw3r17s"; depends=[]; }; MWRidge = derive2 { name="MWRidge"; version="1.0.0"; sha256="17kvs9npr1ff24z3pv9x2qnfwyy6w3hc7hm60ynzbjlk2rr11xr9"; depends=[glmnet]; }; - MXM = derive2 { name="MXM"; version="1.3.2"; sha256="0d3x773870ky6q36g6skcyfvywrwc264f5g55sh3229c6qpjgzq2"; depends=[doParallel energy foreach geepack hash lme4 MASS nnet ordinal quantreg relations Rfast survival visNetwork]; }; + MXM = derive2 { name="MXM"; version="1.3.3"; sha256="1xzw7ad3kpd8chfksgfsv0wdy7h1kzw5n410ndfhd1mx1cdfghj9"; depends=[doParallel dplyr energy foreach geepack hash knitr lme4 MASS nnet ordinal quantreg relations Rfast survival visNetwork]; }; MaXact = derive2 { name="MaXact"; version="0.2.1"; sha256="1n7af7kg54jbr09qk2a8gb9cjh25cnxzj2snscpn8sr8cmcrij0i"; depends=[mnormt]; }; Maeswrap = derive2 { name="Maeswrap"; version="1.7"; sha256="0cnnr5zq7ax1j7dx7ira7iccqppc6qpdjghjarvdb2zj0lf69yyb"; depends=[geometry lattice rgl stringr]; }; MagneticMap = derive2 { name="MagneticMap"; version="1.0"; sha256="1634bk6x92z01gyiy89c1g6z5cjsj8pf4f358y7rk2kppmfz4cf7"; depends=[scatterplot3d]; }; @@ -2050,8 +2092,10 @@ in with self; { ManlyMix = derive2 { name="ManlyMix"; version="0.1.11"; sha256="0vnx4cmx5vv8qh3pn75lz1mxap1ar4jnc5j15552vvi4i9pgmmar"; depends=[]; }; ManyTests = derive2 { name="ManyTests"; version="1.2"; sha256="1mi7wvnkcd95126f1h8vl8skn397yd2zqvcswprqar54p161wgyi"; depends=[]; }; Map2NCBI = derive2 { name="Map2NCBI"; version="1.1"; sha256="19gafyql767f1p4fxdw7d5a8z1b4vg7jfrvzaml5x16fj6c78fjm"; depends=[]; }; - MapGAM = derive2 { name="MapGAM"; version="1.0"; sha256="1hzv3sy2szxl4fhnnzlwagh3qm4z22cbhiwi8whgn5ymwlnw0pca"; depends=[gam maptools sp survival]; }; + MapGAM = derive2 { name="MapGAM"; version="1.1"; sha256="0sh7qnzzahaz09nmld5p8df93my6k5vpvgmvqdlz84vghcfbfpa2"; depends=[colorspace gam maptools sp survival]; }; MareyMap = derive2 { name="MareyMap"; version="1.3.4"; sha256="1wap0syzgd0w3xla2x4bcasn8zzlj63r5yyf9r479nvifjxdqxzz"; depends=[tkrplot]; }; + MargCond = derive2 { name="MargCond"; version="1.0.0"; sha256="07qh1lgy8ds11cwlb4rxkl6aiph91zq29sy27b8wwxalycdgjrg8"; depends=[gee lme4 MASS Matrix]; }; + MarginalMediation = derive2 { name="MarginalMediation"; version="0.5.1"; sha256="1v7ly1yaglyh257b1q4vc7sfrk41lb4ar9dpwf5ppap581pgpz3f"; depends=[boot magrittr purrr]; }; MarkowitzR = derive2 { name="MarkowitzR"; version="0.9900.0"; sha256="1wyqlgmb376dsvx7nixpbynjzp7xpmsh4fx9s7nai6fhjb50mxha"; depends=[gtools matrixcalc sandwich]; }; Massign = derive2 { name="Massign"; version="1.1.0"; sha256="09i32lsrx40rxrnb9alfipfrkipy4mza5nr4gcpn2a5h86ak9290"; depends=[]; }; MasterBayes = derive2 { name="MasterBayes"; version="2.55"; sha256="14532l41x5k3z2qg0vklafqyzmn45qny9hlrrgriykajv3xjf2lz"; depends=[coda genetics gtools kinship2]; }; @@ -2061,8 +2105,8 @@ in with self; { MatchLinReg = derive2 { name="MatchLinReg"; version="0.7.0"; sha256="015s3xdaj56prq8lsdry3ibjkrb6gg0fwgzjh496gdx5axvpbk8g"; depends=[Hmisc Matching]; }; Matching = derive2 { name="Matching"; version="4.9-2"; sha256="0lv5b41l797c4bl2rzmdqzjnn47zpvvcv3md3xwxvvz5knxky5x4"; depends=[MASS]; }; MatchingFrontier = derive2 { name="MatchingFrontier"; version="1.0.0"; sha256="1djlkx7ph8p60n2m191xq9i01c2by4vpmjj25mbxy5izxm5123aa"; depends=[igraph MASS segmented]; }; - Matrix = derive2 { name="Matrix"; version="1.2-12"; sha256="1wm45hg4x5ay15y03k6rmgkd1n9r01da72mszk24vafwd7pimr8n"; depends=[lattice]; }; - Matrix_utils = derive2 { name="Matrix.utils"; version="0.9.6"; sha256="0aa225y6vqm0dqjfppfrc43wbq3ks9aszhmy73xbai2v12sh439g"; depends=[grr Matrix]; }; + Matrix = derive2 { name="Matrix"; version="1.2-14"; sha256="15hknim84nj3f54vkchca5ac0c3ip15v1by18k5parmn8wsl19j9"; depends=[lattice]; }; + Matrix_utils = derive2 { name="Matrix.utils"; version="0.9.7"; sha256="1x64r4aj3gy1dzjjysyrk1j9jq3qsnyrqws8i6bs7q8pf6gvr7va"; depends=[grr Matrix]; }; MatrixCorrelation = derive2 { name="MatrixCorrelation"; version="0.9.2"; sha256="0s4gxgl6fsy0fnjmsdz4k7p96vl6p00xl9w2fg7v0gikjpz6h5bg"; depends=[plotrix pracma progress Rcpp RcppArmadillo RSpectra]; }; MatrixEQTL = derive2 { name="MatrixEQTL"; version="2.2"; sha256="1205jxx5aj783r2dmpawiq4rr30b60fq1qf053i7wylw07pz6vba"; depends=[]; }; MatrixLDA = derive2 { name="MatrixLDA"; version="0.1"; sha256="19q6wl8fc6jzn7544qnlpzfh9v0xlg9cr78l6k8kx6kzjnbnyh9z"; depends=[glasso plyr Rcpp RcppArmadillo]; }; @@ -2079,7 +2123,7 @@ in with self; { MedOr = derive2 { name="MedOr"; version="0.1"; sha256="1rwc14s16lnzgb78ac2017hv9pss7zw7nw3y7vrvq1qx4fgiw6f8"; depends=[]; }; MediaK = derive2 { name="MediaK"; version="1.0"; sha256="19cmxl2wksw9kvjsfn1m4nkr5gpcx6bk0sqrabj1n0dla1l32v2a"; depends=[Rcpp RcppEigen]; }; Mediana = derive2 { name="Mediana"; version="1.0.6"; sha256="0cx2bkz5m96dirqknfsi9944rhnn14wwdimw1hq1p8c073z40i7a"; depends=[doParallel doRNG foreach MASS mvtnorm survival]; }; - Mega2R = derive2 { name="Mega2R"; version="1.0.0"; sha256="1rprbn7pkp0haahf34d1w7pmzn6hv8ci93gfp68hpyxxi6qm61g0"; depends=[AnnotationDbi DBI GenABEL GenomeInfoDb pedgene Rcpp RSQLite SKAT]; }; + Mega2R = derive2 { name="Mega2R"; version="1.0.2"; sha256="0v56sd0q8bxirjm851sjba52sb846ccqn7bihy0zm4fkqlfdm5m3"; depends=[AnnotationDbi DBI GenABEL GenomeInfoDb pedgene Rcpp RSQLite SKAT]; }; MendelianRandomization = derive2 { name="MendelianRandomization"; version="0.3.0"; sha256="1nnj4nmzrvdj2arq74bg5ckhmll2z9ydnd75ds48njbhxla2645l"; depends=[ggplot2 iterpc knitr Matrix plotly rmarkdown robustbase]; }; MenuCollection = derive2 { name="MenuCollection"; version="1.2"; sha256="0v3flicfnln9qld150yk3rfldvsr4dllhq80l02n1lq6px38nf2s"; depends=[gplots RGtk2 RGtk2Extras]; }; MergeGUI = derive2 { name="MergeGUI"; version="0.2-1"; sha256="1hx03qv5jyjjmqdvylc3kz5dl5qsdqwlirjbrnxrw7grkgkhygap"; depends=[cairoDevice ggplot2 gWidgetsRGtk2 rpart]; }; @@ -2093,7 +2137,7 @@ in with self; { MetaComp = derive2 { name="MetaComp"; version="1.1.1"; sha256="0ndnjpg0c9k4171n190qwxmy79kw2ax4y5ap4xvaf0x561p072l6"; depends=[Cairo data_table dplyr ggplot2 plyr reshape2]; }; MetaCycle = derive2 { name="MetaCycle"; version="1.1.0"; sha256="1kzdk21xpbvwibs8501zwdb9lzj7g5nv2zqaskg9x0szshhg8vpp"; depends=[gnm]; }; MetaIntegrator = derive2 { name="MetaIntegrator"; version="1.0.3"; sha256="0611k497ixy0f51lmqzs08zqqq5krrxrm7m0xqdl18gkwrw3w656"; depends=[Biobase DBI GEOmetadb GEOquery ggplot2 gplots multtest preprocessCore reshape rmeta Rmisc RMySQL RSQLite stringr]; }; - MetaLandSim = derive2 { name="MetaLandSim"; version="1.0.1"; sha256="1m7h1bdk172zjx7xxlh4lac17ndx28vjpvdkyb352j5f4r4aq09g"; depends=[coda e1071 fgui googleVis igraph knitr maptools minpack_lm raster rgeos rgrass7 sp spatstat zipfR]; }; + MetaLandSim = derive2 { name="MetaLandSim"; version="1.0.3"; sha256="0zf45c6prr1g9xqsn4f5cxh30qvadbk0hzknz2hff6ljggjxxfia"; depends=[coda e1071 fgui googleVis igraph knitr maptools minpack_lm raster rgeos rgrass7 sp spatstat zipfR]; }; MetaLonDA = derive2 { name="MetaLonDA"; version="1.0.9"; sha256="1iy7p91ln48fhym7gna8xmqrva6fcwxapqcyh1h6hqr0h3j392qd"; depends=[caTools DESeq2 doParallel edgeR ggplot2 gss metagenomeSeq plyr]; }; MetaPCA = derive2 { name="MetaPCA"; version="0.1.4"; sha256="14g4v3hyxnds4l2q36mpz282yqg8ahgdw3b0qmj0xg17krrf5l2s"; depends=[foreach]; }; MetaPath = derive2 { name="MetaPath"; version="1.0"; sha256="1vvpfv6yc4rd4apqfs2yzm97xxsv43ghwqnjq6w1xrc4pdx2p634"; depends=[Biobase genefilter GSEABase impute]; }; @@ -2103,6 +2147,7 @@ in with self; { MetaboList = derive2 { name="MetaboList"; version="1.2"; sha256="15wkj29s1mxi1wzqzlh8lkr5jkw15dbc37h3hzsc0r72a3ddzf38"; depends=[enviPick]; }; MetaboQC = derive2 { name="MetaboQC"; version="1.0"; sha256="1hm0ndwda1ciyyg8igkpaalvvdyd7aq5wnl9gzza8fr1l9fxp4a2"; depends=[plyr]; }; MetabolAnalyze = derive2 { name="MetabolAnalyze"; version="1.3"; sha256="0cl76x6imx4a95wd74xx5s8i2vg8wq3inqgakvgzmkwxad6qhrqp"; depends=[ellipse gplots gtools mclust mvtnorm]; }; + MetabolomicsBasics = derive2 { name="MetabolomicsBasics"; version="1.0"; sha256="0crgdi7h8gl219lrb7i4f9jisgs7mkz45imwzh69acly4d2332ni"; depends=[C50 caret e1071 mixOmics pcaMethods plyr rattle rpart]; }; MetaheuristicFPA = derive2 { name="MetaheuristicFPA"; version="1.0"; sha256="096k866mgrdgj55rzvdj080z80hzlj0667mydpz7gjaqdfriw8jg"; depends=[Rcpp RcppArmadillo]; }; MetamapsDB = derive2 { name="MetamapsDB"; version="0.0.2"; sha256="0y5szb52karxcqr1f9mb050awprbk1ynckr987aw3d4ia6i9gcif"; depends=[base64enc cluster data_table DBI dplyr forcats future GenomicRanges ggplot2 gridExtra httr igraph IRanges lubridate magrittr Matrix purrr RCurl rgexf RJSONIO RSQLite shiny ShortRead stringr tidyr zoo]; }; Metatron = derive2 { name="Metatron"; version="0.1-1"; sha256="0apz2k3za19px1bcg4ls0axaljrpxnqhs86b6s862c370sspc1x8"; depends=[lme4 Matrix mpt]; }; @@ -2130,10 +2175,11 @@ in with self; { MissingDataGUI = derive2 { name="MissingDataGUI"; version="0.2-5"; sha256="0drbm87ka17avg6fmswjilgnz9c3azwd0236s8yfms24k9k77vnd"; depends=[cairoDevice GGally ggplot2 gWidgetsRGtk2 reshape]; }; MitISEM = derive2 { name="MitISEM"; version="1.2"; sha256="0dn398vrxh16gmy7ghh5000dgk7cbhb3gi3myrxp5dfri3ysjxcj"; depends=[mvtnorm]; }; MittagLeffleR = derive2 { name="MittagLeffleR"; version="0.2.0"; sha256="1r6hamc4vanxdbmp37ib20drw49c4vxkskqb93qlagaqxgr9xch0"; depends=[stabledist]; }; + MixAll = derive2 { name="MixAll"; version="1.4.2"; sha256="1m3jkavamx1c2zzalh9j8psk69jmbh4lyl0sxn4x30whv0km5mvp"; depends=[Rcpp rtkore]; }; MixGHD = derive2 { name="MixGHD"; version="2.2"; sha256="1cq6mar6h56nscnd7xs6spf45mlqp48lssw2i57zfvi75f6s70p4"; depends=[Bessel cluster e1071 ghyp MASS mixture mvtnorm numDeriv]; }; MixMAP = derive2 { name="MixMAP"; version="1.3.4"; sha256="0gxghym5ghbyxf589hda2fhv5l3x5jvm6i40x5xdwx4hadcn8k9a"; depends=[lme4]; }; MixRF = derive2 { name="MixRF"; version="1.0"; sha256="1av1wx7wmfc3z8a4bc6g3i3b807nc28n3s2rs3yh0rcwq1pfl0ir"; depends=[doParallel foreach lme4 randomForest]; }; - MixSIAR = derive2 { name="MixSIAR"; version="3.1.7"; sha256="0myn50sdmp83bhzm66sa61xwxv3lka427mv1ynhqshaqrb5flj35"; depends=[coda compositions ggmcmc ggplot2 lattice MASS R2jags RColorBrewer reshape reshape2 rjags]; }; + MixSIAR = derive2 { name="MixSIAR"; version="3.1.10"; sha256="0kc0apzl6aq9qjgrnnad78k71g91hzc1d7f3j0s1kpwzax2q6l2l"; depends=[bayesplot coda ggmcmc ggplot2 lattice loo MASS MCMCpack R2jags RColorBrewer reshape reshape2 rjags]; }; MixSim = derive2 { name="MixSim"; version="1.1-3"; sha256="1mrzbax2inpmhxz26zlybci6ks5q780f10vcy1za638dmkz16fnv"; depends=[MASS]; }; MixedDataImpute = derive2 { name="MixedDataImpute"; version="0.1"; sha256="123c9i3znv53ikfnga1z9gq5bdl4vyww89967255wg5dzb7w00cn"; depends=[BH gdata Rcpp RcppArmadillo]; }; MixedPoisson = derive2 { name="MixedPoisson"; version="2.0"; sha256="0g5mpzj0wda6g46q3cg5mm3x4dvpz9gdclzn2m17l62lzny2i10p"; depends=[gaussquad MASS Rmpfr]; }; @@ -2150,24 +2196,26 @@ in with self; { ModelGood = derive2 { name="ModelGood"; version="1.0.9"; sha256="1y99a7bgwx167pncxj00lbw3cdjj23fhhzl8r24hwnhxr984kvzl"; depends=[prodlim]; }; ModelMap = derive2 { name="ModelMap"; version="3.3.5"; sha256="1rmm1a2nw91kzvxpvq9qhlag0dhihis7mgscgslqia6z8fr86qvs"; depends=[corrplot fields HandTill2001 mgcv PresenceAbsence randomForest raster rgdal]; }; ModelMetrics = derive2 { name="ModelMetrics"; version="1.1.0"; sha256="119xxmzb5biq7k1yxqsf0jmmarmfn6lds9x9hfgv593xlpym6za8"; depends=[Rcpp]; }; + Modelcharts = derive2 { name="Modelcharts"; version="0.1.0"; sha256="1jy78kyyh4r13px2d5bm7fra5bkcpimzfji0hmydspkfi3qla37x"; depends=[dplyr plotly]; }; Modeler = derive2 { name="Modeler"; version="3.4.2"; sha256="0zf3z3y4w1jixmcbhkgrjh4dx7x3bfi66hrbzsxyfp7abk0p2d6l"; depends=[class ClassComparison ClassDiscovery e1071 neuralnet nnet oompaBase randomForest rpart TailRank]; }; MomTrunc = derive2 { name="MomTrunc"; version="1.41"; sha256="0az499xzvnczqnbh4g3h5jyz8isq0zdw0x654haac6v6045f5xav"; depends=[matrixcalc mvtnorm]; }; - Momocs = derive2 { name="Momocs"; version="1.2.2"; sha256="1a4y4zg9zd0pmhcjwvi5k1x36lyl1cw5i6bfm9qphd5bm438n70y"; depends=[ape dplyr geometry geomorph ggplot2 jpeg magrittr MASS plyr reshape2 sp]; }; + Momocs = derive2 { name="Momocs"; version="1.2.9"; sha256="13pgn31hv529z33mi020w8wm8ya7hyi5yfsp45a78wdhinqas9mm"; depends=[ape dplyr geometry geomorph ggplot2 jpeg magrittr MASS progress RColorBrewer rgeos sp]; }; Mondrian = derive2 { name="Mondrian"; version="1.0-0"; sha256="07r64q518diphai951pw4vfaw4sd6bqwhi6q5cp4pcl3aqjynkmj"; depends=[RColorBrewer]; }; MonetDB_R = derive2 { name="MonetDB.R"; version="1.0.1"; sha256="1r7vki0rrzwcrfg4f2lfx30g614vf2xi62qb1rs21a9j5741lxlx"; depends=[codetools DBI digest]; }; MonetDBLite = derive2 { name="MonetDBLite"; version="0.5.1"; sha256="01gcwr5r47dkmr1y2q387xv1qr2fryq9574aijx1a39ywhvcm8pq"; depends=[codetools DBI digest]; }; MonoInc = derive2 { name="MonoInc"; version="1.1"; sha256="14rykw3bfj0vznz0rw4vsg1k4vanfv9cy867vspw966ncl4bw70h"; depends=[compare doParallel foreach iterators sitar]; }; MonoPhy = derive2 { name="MonoPhy"; version="1.2"; sha256="0997kg8hfwgsc9s155z0wrf7rrhn3vf6681j9psjl3hsspg08z2r"; depends=[ape phangorn phytools RColorBrewer taxize]; }; MonoPoly = derive2 { name="MonoPoly"; version="0.3-9"; sha256="130hv05fwsskk1bvr7fk8bmafq26vimkfgssjdk3zaz0hm3pxrp4"; depends=[quadprog]; }; - MonteCarlo = derive2 { name="MonteCarlo"; version="1.0.2"; sha256="1lb5cvly7v45kn24m8pyfw036b8j7lq4my0igaj859r74ky3knw9"; depends=[abind codetools rlecuyer snow snowfall]; }; + MonteCarlo = derive2 { name="MonteCarlo"; version="1.0.5"; sha256="0a62wq448kq10mf1nhdr0nybzzz7d63nxakggpzmkzz4fz0l67bd"; depends=[abind codetools reshape rlecuyer snow snowfall]; }; Morpho = derive2 { name="Morpho"; version="2.5.1"; sha256="1cxxsg7j0fq9drxkl6xlaw7j2cajzx9khcs9f3mb9l2ixd42hqnp"; depends=[colorRamps doParallel foreach MASS Matrix Rcpp RcppArmadillo rgl Rvcg]; }; MorseGen = derive2 { name="MorseGen"; version="1.2"; sha256="1kq35n00ky70zmxb20g4mwx0hn8c5g1hw3csmd5n6892mbrri8s9"; depends=[]; }; MortCast = derive2 { name="MortCast"; version="1.1-1"; sha256="077kk08pckm07rh7vxiw8whiyc4fbsj3qihih6mg09slaq8zr825"; depends=[wpp2017]; }; MortHump = derive2 { name="MortHump"; version="0.2"; sha256="1yhrdcwqf27v22mrysh51m3jcrnf74x21x7db25nic8q8fdmchj2"; depends=[demography HMDHFDplus Matrix minpack_lm MortalitySmooth RColorBrewer svcm WeightedCluster]; }; MortalityLaws = derive2 { name="MortalityLaws"; version="1.3.0"; sha256="1db4p7kl3kh3kdzqbbvyj3zxv6pz0jnc9fl7j2590ajwd5m9crg4"; depends=[minpack_lm pbapply RCurl]; }; MortalitySmooth = derive2 { name="MortalitySmooth"; version="2.3.4"; sha256="1clx8gb8jqvxcmfgv0b8jyvh39yrmcmwr472j9g3ymm95m4hr8fq"; depends=[lattice svcm]; }; + MortalityTables = derive2 { name="MortalityTables"; version="1.0"; sha256="07pbjgc4qvznw1rfvmz6ndg0gzj0k61iajwn51ijpb7hscwi8937"; depends=[ggplot2 scales]; }; MotilityLab = derive2 { name="MotilityLab"; version="0.2-5"; sha256="080j548sp1c4yqqd7p7zgr70j1xyrw3fgjj1f521sgh84x5h2hbc"; depends=[ellipse]; }; - MplusAutomation = derive2 { name="MplusAutomation"; version="0.7-1"; sha256="1f6gd227pkcs0sa9bwng0m617pjv3b0dm6rsij06a4n2gp50aysw"; depends=[boot coda digest gsubfn lattice pander plyr texreg xtable]; }; + MplusAutomation = derive2 { name="MplusAutomation"; version="0.7-2"; sha256="0hy6g0fgidjpz7mn1qwwdnhyxjm0v2g9r3fl32zmkvix3852qx1r"; depends=[boot coda digest ggplot2 gsubfn lattice pander plyr texreg xtable]; }; Mposterior = derive2 { name="Mposterior"; version="0.1.2"; sha256="16a7wvg41ld2bhbss480js5h12r41nl7jmc3y4jsbv1lr5py4ymy"; depends=[Rcpp RcppArmadillo]; }; MsdeParEst = derive2 { name="MsdeParEst"; version="1.7"; sha256="1zhi1jr30sl7jpsw37lc3akfzixlhm9k2hjkha1pjy5fmd5lddlx"; depends=[MASS moments mvtnorm sde]; }; MuFiCokriging = derive2 { name="MuFiCokriging"; version="1.2"; sha256="09p8wdmlsf21ibqyjigwdipcin3ij0naxcd035hqgfj76v20wiyv"; depends=[DiceKriging]; }; @@ -2189,7 +2237,8 @@ in with self; { MultiRR = derive2 { name="MultiRR"; version="1.1"; sha256="1jrhx3nlqwsv3i6r8fs142llw88qad41rsh0sj1pv1gb928zpvl3"; depends=[lme4 MASS]; }; MultiSV = derive2 { name="MultiSV"; version="0.0-67"; sha256="0924lvkx12aqjxxz8bwqdi4h9xc2acf8aynllx0m45ip5r4gh1g2"; depends=[nlme reshape]; }; MultiSkew = derive2 { name="MultiSkew"; version="1.1.1"; sha256="1s0k3z1vgdz1cxad007p246ghwx282w06inhrjjscbwliz1vg5ib"; depends=[MaxSkew]; }; - MultiVarSel = derive2 { name="MultiVarSel"; version="1.0"; sha256="0r1l7h2rm7vlvnrsq0khjdd5cb236g9xq1fb1vr15038kf0lmkij"; depends=[ggplot2 glmnet Matrix]; }; + MultiVarMI = derive2 { name="MultiVarMI"; version="1.0"; sha256="1mlaprg3cfmfwrq7wh64fmyv1wpdnil7wpcrcg3921qydk65py6z"; depends=[BinOrdNonNor corpcor CorrToolBox Matrix moments norm PoisNonNor]; }; + MultiVarSel = derive2 { name="MultiVarSel"; version="1.1.2"; sha256="07qdi43bg03xyr99361c0565m1i5kzqjbvlc2npnyjyc2ygr386d"; depends=[glmnet Matrix tidyverse]; }; MultinomialCI = derive2 { name="MultinomialCI"; version="1.0"; sha256="0ryi14d102kvxawls04hcw50n79jkcn29ill77lkfvj6nlzj8i5q"; depends=[]; }; MultipleBubbles = derive2 { name="MultipleBubbles"; version="0.1.0"; sha256="1g6yqp53dbd96jcjgmif39zb3a7f9zil10dhqi3vz3qv6r2vsnkj"; depends=[foreach MASS]; }; MultiplierDEA = derive2 { name="MultiplierDEA"; version="0.1.17"; sha256="0s67w8ifd7g231aqq0qdia13kyb1cczhxrigsgrw48pqcfkv9208"; depends=[lpSolveAPI]; }; @@ -2211,7 +2260,7 @@ in with self; { NCSampling = derive2 { name="NCSampling"; version="1.0"; sha256="0bv93xffnzvbip86b3pg7apxzh3410mxff77q119m0z7f6vm3fam"; depends=[lattice randomForest yaImpute]; }; NCmisc = derive2 { name="NCmisc"; version="1.1.5"; sha256="1dq38ac97l8b6ys3yxqnndbrp8fa8zfw0lr4nq2421sn91769w22"; depends=[proftools]; }; NCutYX = derive2 { name="NCutYX"; version="0.1.0"; sha256="0r2ghnvrbya3p1d8rb5bsnz5v852vvc6rq65yafn2xzr7886wrg2"; depends=[fields glmnet MASS mvtnorm Rcpp RcppEigen]; }; - NEArender = derive2 { name="NEArender"; version="1.4"; sha256="1zdqil28j6jc6317dkpz5i1qj7b4i3lin4800n1kf14zg9nxjdyg"; depends=[MASS RColorBrewer ROCR]; }; + NEArender = derive2 { name="NEArender"; version="1.5"; sha256="006128psqxbyw3z4wqflc4xsir3d641r4flwkxmv836lp7fc2d9a"; depends=[hexbin MASS RColorBrewer ROCR]; }; NEff = derive2 { name="NEff"; version="1.1"; sha256="16ys1fi28kbzg3am9vz1c5pc9x0ac47pl6za04h63lspk99yplzk"; depends=[bit msm]; }; NEpiC = derive2 { name="NEpiC"; version="1.0.1"; sha256="11zf112xcsg3k93vks2fnsflw2v2d56a0bsjpd460d21k3gipfz8"; depends=[igraph PairedData]; }; NFP = derive2 { name="NFP"; version="0.99.2"; sha256="1wnllzlww8257sbrgvfyvd21qvhf7j17mcpf6d4p6binaw8svnsb"; depends=[apcluster dplyr ggplot2 graph igraph KEGGgraph magrittr plyr stringr tidyr]; }; @@ -2224,7 +2273,7 @@ in with self; { NIRStat = derive2 { name="NIRStat"; version="1.0"; sha256="1hi8201zslp1f7m3jci8q03y3f1zlcck2x3i793l7lsyl7qbzd1z"; depends=[ggplot2 gridExtra mgcv]; }; NISTnls = derive2 { name="NISTnls"; version="0.9-13"; sha256="03a1c8a5dr5l5x4wbclnsh3vmx3dy7migfdzdx7d7p3s7hj3ibif"; depends=[]; }; NISTunits = derive2 { name="NISTunits"; version="1.0.1"; sha256="0km9l3k9p35sb1qrhrz4ijjsdihvsp6j7cz5kh46lgf7nn6xdk7a"; depends=[]; }; - NLMR = derive2 { name="NLMR"; version="0.2.1"; sha256="0vyha5sx0mz2kky8qwylamqc6k0gnmbkyanapy3dqav66l98ki8b"; depends=[checkmate dismo dplyr extrafont ggplot2 igraph magrittr purrr RandomFields raster rasterVis sp spatstat tibble tidyr viridis]; }; + NLMR = derive2 { name="NLMR"; version="0.3.0"; sha256="0cqs48jy9ydivjpmx76dyxxdhh3lww7qrmx5s8jcsxxxnn93lq8m"; depends=[checkmate dplyr fasterize purrr RandomFields raster sf spatstat tibble]; }; NLP = derive2 { name="NLP"; version="0.1-11"; sha256="15v50gxzmpqx49wzkwxfpb5xjpg9y829a0ifys372kf1cfj521aq"; depends=[]; }; NLPutils = derive2 { name="NLPutils"; version="0.0-4"; sha256="1dqbf8xmrzx81ybmp5qkd5a5rw3c19l2wxfnpddij4a1n074bwym"; depends=[NLP qdap SnowballC]; }; NLRoot = derive2 { name="NLRoot"; version="1.0"; sha256="1x8mcdgqqrhyykr12bv4hl4wbh1zw2qgpnd2yrm68kb92iy95rh4"; depends=[]; }; @@ -2234,8 +2283,9 @@ in with self; { NMOF = derive2 { name="NMOF"; version="1.2-2"; sha256="03286pp57m7imbgw334r34yg7c5zbaw3d1qxr0sbhmc2jxvv1arm"; depends=[]; }; NNLM = derive2 { name="NNLM"; version="0.4.1"; sha256="1wi2rbj56v49hsnhwdyyjwfk4hb84sagfq6mpjis4ccq65hxkvfv"; depends=[Rcpp RcppArmadillo RcppProgress]; }; NNMIS = derive2 { name="NNMIS"; version="1.0.0"; sha256="02k766klw2fssiii5f4291qvs144ab9i5b6pmqvhyr87zdb87nf9"; depends=[survival]; }; - NNS = derive2 { name="NNS"; version="0.3.8.3"; sha256="0qyb8y54hxy5ac6m0mqyqbfjc4r3m4qvb83nw2vp4mb49fiinwxx"; depends=[data_table rgl stringr]; }; + NNS = derive2 { name="NNS"; version="0.3.8.6"; sha256="0dfnqy2i306vvqah40p3mj7yyxr9gxrgw8555p6shjiwhqp8rdaq"; depends=[data_table rgl stringr]; }; NNTbiomarker = derive2 { name="NNTbiomarker"; version="0.29.11"; sha256="0sqlf7vzhpmq2g98c2qlrcqn3ba4ycfxbczgcjiqqhqsvgkpacc1"; depends=[magrittr mvbutils shiny stringr xtable]; }; + NOAAWeather = derive2 { name="NOAAWeather"; version="0.1.0"; sha256="077c7z13y2lhjzk2fbb9yfa1ay31dfryxmyg76z7l1a03h20xrvb"; depends=[dplyr ggExtra ggmap ggplot2 gridExtra jsonlite lubridate RCurl scales tcR tidyr]; }; NORMA = derive2 { name="NORMA"; version="0.1"; sha256="193q6dwn8v7k8xq0amjpvb3v6mn7c6agqa487gvjj78dy1qz720a"; depends=[rootSolve]; }; NORMT3 = derive2 { name="NORMT3"; version="1.0-3"; sha256="041s0qwmksy3c7j45n4hhqhq3rv2hncm2fi5srjpwf9fcj5wxypg"; depends=[]; }; NORRRM = derive2 { name="NORRRM"; version="1.0.0"; sha256="06bdd5m46c8bbgmr1xkqfw72mm38pafxsvwi9p8y7znzyd0i6ag3"; depends=[ggplot2 SDMTools]; }; @@ -2255,7 +2305,7 @@ in with self; { NSA = derive2 { name="NSA"; version="0.0.32"; sha256="0lnimyx3fpnw9zfhqm7y3ssvbpmvbmhcqy6fp83862imiwpl8i5r"; depends=[aroma_affymetrix aroma_core DNAcopy MASS matrixStats R_methodsS3 R_oo R_utils]; }; NSM3 = derive2 { name="NSM3"; version="1.11"; sha256="0lnmzpmh3i4lh5lfba6rhacf4zadbcrs7ify354h5245j0gxp1bv"; depends=[agricolae ash binom BSDA coin combinat epitools fANCOVA gtools Hmisc km_ci MASS metafor nortest np partitions quantreg Rfit SemiPar SuppDists survival waveslim]; }; NSUM = derive2 { name="NSUM"; version="1.0"; sha256="1as4g3v7qlk9wxlpwhg293980jq9gy6qay77bbcrjf481gvkkbp6"; depends=[MASS MCMCpack]; }; - NScluster = derive2 { name="NScluster"; version="1.1.1"; sha256="1w63abh4q0wgv3x7inl2xyp9qgr9m223r2p7nfiqnxk9y259kh04"; depends=[]; }; + NScluster = derive2 { name="NScluster"; version="1.2.0"; sha256="04mn9lh4cl1hkz27z7ldqnfwmrvqi7m1zrvscpywdcilpjmcryv0"; depends=[]; }; NUCOMBog = derive2 { name="NUCOMBog"; version="1.0.4.1"; sha256="1grz2yxrklqglw9027c8k01jnb42p453fcd38arw4wd85y5hbam4"; depends=[snowfall]; }; NameNeedle = derive2 { name="NameNeedle"; version="1.2.4"; sha256="1f8hmabwafjmgx2z381a3m84zfrd0s9x51haa4c1phq41yfq2lm5"; depends=[]; }; NanoStringNorm = derive2 { name="NanoStringNorm"; version="1.2.1"; sha256="05r1hvrxwi2mcq3pv6b699291qg120ijad96s5dah2f6cwx7gm7j"; depends=[gdata vsn XML]; }; @@ -2279,25 +2329,28 @@ in with self; { NetworkChange = derive2 { name="NetworkChange"; version="0.3"; sha256="1brpa6fhmrgafmk1iw19g0pppwxi0ld0nyhx9c0fgnkn9m82isjk"; depends=[abind ggplot2 ggvis LaplacesDemon MASS MCMCpack mvtnorm RColorBrewer Rmpfr]; }; NetworkComparisonTest = derive2 { name="NetworkComparisonTest"; version="2.0.1"; sha256="09fqlnpdibf9jr5mw2pzmwi66f6cjz8rmm8jay0cv2bami7jhy2a"; depends=[IsingFit IsingSampler qgraph reshape2]; }; NetworkDistance = derive2 { name="NetworkDistance"; version="0.1.0"; sha256="0k11crn1wiisw4qrc2yidrhdvscx59skqy4ckxdiykpb1jh5a7s4"; depends=[doParallel foreach igraph Matrix network Rcpp RcppArmadillo Rdpack RSpectra]; }; + NetworkExtinction = derive2 { name="NetworkExtinction"; version="0.1.0"; sha256="1scza639kf3zzz2yd9q31wsvxpvpq8hbx82a206jkxlxb4dq6vxr"; depends=[broom dplyr ggplot2 magrittr network scales sna tidyr]; }; NetworkInference = derive2 { name="NetworkInference"; version="1.1.2"; sha256="0lydfkpgsi842fbapnggpngarvqc8arhy4qn13x47myk1mmkkisj"; depends=[assertthat checkmate ggplot2 ggrepel Rcpp RcppProgress]; }; NetworkRiskMeasures = derive2 { name="NetworkRiskMeasures"; version="0.1.2"; sha256="0c10nahybjd1n0yr78ynbsdnkfa0p7kz6dx3rbwxwsp3x4mrcd6y"; depends=[dplyr expm ggplot2 Matrix]; }; - NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.0.0"; sha256="1z0l8fdxvyxgajq0j6sx6mvr15sxd45kavy8ywk3hnlwcz1xy7m8"; depends=[corrplot devtools fdrtool graph hypergeo igraph MASS Matrix psych pwr qgraph R_matlab RBGL RColorBrewer]; }; + NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.1.1"; sha256="19gn50f96nnccgv68vp6850pjdcl433lmppshc2imcjw4hn45fra"; depends=[corpcor corrplot doSNOW fdrtool foreach graph hypergeo igraph MASS Matrix ppcor psych pwr qgraph R_matlab RBGL RColorBrewer]; }; NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.5.1"; sha256="1dsjv0vm45skw74x1fz3gd7g6p52ayfwz85bh92j29mfxbnacbnn"; depends=[ggplot2 nnet reshape2 scales tidyr]; }; Newdistns = derive2 { name="Newdistns"; version="2.1"; sha256="1b5njkzj8b0wrvvfv904di0933k9d320gadmfm5zl6pzdp34bh1i"; depends=[AdequacyModel]; }; - NightDay = derive2 { name="NightDay"; version="1.0.1"; sha256="0vkpr2jwhgghiiiaiglaj1b9pz25fcsl628c9nsp9zyl67982wz1"; depends=[maps]; }; + NightDay = derive2 { name="NightDay"; version="1.0.1.1"; sha256="1gwwxk428gkvci4dhfb3zikvidalpqkl0q2r6qpm58c12j14jk1h"; depends=[maps]; }; Nippon = derive2 { name="Nippon"; version="0.6.5"; sha256="187jzqsabg0vfvipbaig6nsdwclk5p3hgkvg0yid2ip8qc5qcmdw"; depends=[maptools sf sp stringr]; }; NipponMap = derive2 { name="NipponMap"; version="0.1"; sha256="09cvzw32f0kwlwvrv7r6cx2x2jkc2wv843aip8r3iziixmcy7vxq"; depends=[sf tibble]; }; NlcOptim = derive2 { name="NlcOptim"; version="0.5"; sha256="0chrf9ac3x1a0b86lf6wjzdsjcv5n08rav88b7xf4c31lflf1rd1"; depends=[MASS quadprog]; }; + NlinTS = derive2 { name="NlinTS"; version="1.3.2"; sha256="1isr6ci6dsbbx804y3hc8aqvhggfs7ix5yiz32dby69i85b6lj5a"; depends=[Rcpp Rdpack timeSeries]; }; NlsyLinks = derive2 { name="NlsyLinks"; version="2.0.6"; sha256="1kdqifwjkkk4x1ixg3ca6lbqx79ab907nnzwxca5iw721mbk5njg"; depends=[lavaan]; }; NoiseFiltersR = derive2 { name="NoiseFiltersR"; version="0.1.0"; sha256="0y90si8f5hsi273g10hw700r72la30hwqlwg59gaq76wqlkm8j0p"; depends=[caret e1071 kknn MASS nnet randomForest rJava rpart RWeka]; }; NominalLogisticBiplot = derive2 { name="NominalLogisticBiplot"; version="0.2"; sha256="0m9442d9i78x57gdwyl3ckwp1m6j27cam774zkb358dw5nmwxbmz"; depends=[gmodels MASS mirt]; }; - NonCompart = derive2 { name="NonCompart"; version="0.3.3"; sha256="0f66p122rdibn8k79wjhvslgankhxk4dq9sfvq0gcabmi1skfqgq"; depends=[]; }; + NonCompart = derive2 { name="NonCompart"; version="0.4.1"; sha256="0a701lx83vf79pvym2igg2wbkhnx0jykfiglwhic4hvl1lw0f4g2"; depends=[]; }; NonpModelCheck = derive2 { name="NonpModelCheck"; version="3.0"; sha256="13qk2wbgpdf763q5xg29p2hxwqpml23pcgxrzmx12vnapnqfh71k"; depends=[dr]; }; - Nonpareil = derive2 { name="Nonpareil"; version="3.3"; sha256="0bli88salj7mxmnh3b8wims1jlfzlq2lxd4kn2bp2vi58ij9v9pm"; depends=[]; }; + Nonpareil = derive2 { name="Nonpareil"; version="3.3.1"; sha256="0ldl90h499wwm992cj71phf3ryqvjnq0ygarcxf7h85krr4j3sx2"; depends=[]; }; NormExpression = derive2 { name="NormExpression"; version="0.1.0"; sha256="1j4q8mb70ig40acfd9kfy12vxdvq3qpf53rxh47kkw8mywnd0449"; depends=[]; }; + NormPsy = derive2 { name="NormPsy"; version="1.0.7"; sha256="1v6jlbxiapkygivx5vv4ravs86n94qxlmj4q940jjfbbk24bssdc"; depends=[lcmm]; }; NormalGamma = derive2 { name="NormalGamma"; version="1.1"; sha256="0r3hhfscif0sx9v8f450yf119gpvf3ilpb8n3ziy4v4qf2jlcfnk"; depends=[histogram optimx]; }; NormalLaplace = derive2 { name="NormalLaplace"; version="0.2-0"; sha256="11z568zhb7jw9ghp6wlyf26ijm25crc5pqhzw71qgvva42nsmmwn"; depends=[DistributionUtils GeneralizedHyperbolic]; }; - NormalizeMets = derive2 { name="NormalizeMets"; version="0.24"; sha256="0n75swaybsggrawplkncb1vnnyy2imz1b4wy74crdgfg02bzzz2r"; depends=[AUC crmn e1071 GGally ggplot2 htmlwidgets impute knitr limma plotly rmarkdown]; }; + NormalizeMets = derive2 { name="NormalizeMets"; version="0.25"; sha256="0hnyr2aklibbvs6b6q4l0zbb9g8qmp2ds4lqic8a9alqn66sfnf2"; depends=[AUC crmn e1071 GGally ggplot2 htmlwidgets impute knitr limma plotly rmarkdown]; }; NostalgiR = derive2 { name="NostalgiR"; version="1.0.2"; sha256="0rpvwi815sdhaxqpji1y6g0vy8mkn5k6wci0a4jf54pkywwkwrwp"; depends=[txtplot]; }; Nozzle_R1 = derive2 { name="Nozzle.R1"; version="1.1-1"; sha256="05sjip4sz12mwd3jcbvk342p83kdmrd4l2jrh17p18w4l7w4nn0z"; depends=[]; }; Numero = derive2 { name="Numero"; version="1.0.3"; sha256="1jj269b5cw7w4bgp6qvh0b3kpj32fjpsb2nbhyhjlkf7m03gnwwv"; depends=[Rcpp]; }; @@ -2318,7 +2371,7 @@ in with self; { OOBCurve = derive2 { name="OOBCurve"; version="0.2"; sha256="1dr2mp2wi2dir1h5w3rw17154byfy3gx02x2kz1r67l9dfgrr505"; depends=[mlr randomForest ranger]; }; OOR = derive2 { name="OOR"; version="0.1.2"; sha256="1zw7g0365znyn828qqsn83l2a837wwj9cx7dzcbns28vhqmsn6hm"; depends=[]; }; OOmisc = derive2 { name="OOmisc"; version="1.2"; sha256="09vaxn5czsgn6wpr27lka40kzd76jzqgqxavf26ms3m9kkdf83g4"; depends=[]; }; - OPDOE = derive2 { name="OPDOE"; version="1.0-9"; sha256="0pf8rv5wydc8pl4x57g7bk2swjabaxdgijgsigjy5wihfcb48654"; depends=[crossdes gmp mvtnorm nlme orthopolynom polynom]; }; + OPDOE = derive2 { name="OPDOE"; version="1.0-10"; sha256="04z944i4f3i0cjnxh32wf7n2dfyynnvkz4lxdkn90flam2np58yv"; depends=[crossdes gmp mvtnorm nlme orthopolynom polynom]; }; OPI = derive2 { name="OPI"; version="2.7"; sha256="0mmk8alpwm4vmq2yr4qkri2zkh4lxfvrp70j0zljinxcynaraqzn"; depends=[]; }; ORCI = derive2 { name="ORCI"; version="1.1"; sha256="0xy5lvz2scz06fphjyhqbdhp4bizmv87a8xykp9dbgx8b4ssnqgz"; depends=[BiasedUrn BlakerCI PropCIs]; }; ORCME = derive2 { name="ORCME"; version="2.0.2"; sha256="1pm8ajj24qqj2fir0gjzq5f4mfpl1cnj6fm2z5qg6g3sbnm57ayk"; depends=[Iso]; }; @@ -2332,7 +2385,7 @@ in with self; { OTRselect = derive2 { name="OTRselect"; version="1.0"; sha256="1bh14228yz552ngywjf1qyh1isqj4cgiy7n7d4zg8dpqwxr04ykp"; depends=[lars survival]; }; OTUtable = derive2 { name="OTUtable"; version="1.1.1"; sha256="0mjjfndc67gzkqskcq4sxpr8fwx3lm3wjgapgg64rbj5x4i1w4rp"; depends=[]; }; OUwie = derive2 { name="OUwie"; version="1.50"; sha256="1gzgwax9kmcr6rl6nv10xn536nbkjhmg6sqax58xxinc00ykdx75"; depends=[ape corHMM corpcor expm lattice nloptr numDeriv paleotree phangorn phytools Rmpfr]; }; - Oarray = derive2 { name="Oarray"; version="1.4-5"; sha256="1w66vqxvqyrp2h6acnbg3xy7cp6j2dgvzmqqk564kvivbn40vyy4"; depends=[]; }; + Oarray = derive2 { name="Oarray"; version="1.4-9"; sha256="04jng89s19rd8lbjm76wm4p4ggkffwnsa5qa60c4lwn2rj89a8a1"; depends=[]; }; OasisR = derive2 { name="OasisR"; version="3.0.0"; sha256="0dk8asv5v0qiqqf45r3hhh67sa03qdkpgsss649mp2pxzm8chv1y"; depends=[measurements outliers rgdal rgeos seg spdep]; }; OceanView = derive2 { name="OceanView"; version="1.0.4"; sha256="072gjbka7ncp5sa463kbi06fjx7nm1ljgzpx4b7ybq9pcwvnyzz6"; depends=[plot3D plot3Drgl rgl shape]; }; Ohit = derive2 { name="Ohit"; version="1.0.0"; sha256="132d4drc2phw9ppxnczb1ycdg3dv085k8p6bcaj3v866j0hfxjgb"; depends=[]; }; @@ -2352,7 +2405,7 @@ in with self; { OpenImageR = derive2 { name="OpenImageR"; version="1.0.8"; sha256="1j7p1wrzznrisbzw8j1qsxyyv3zr5hk6q9yxw97y6lrfh3c26ig1"; depends=[jpeg png Rcpp RcppArmadillo shiny tiff]; }; OpenML = derive2 { name="OpenML"; version="1.8"; sha256="04m2gi35hykqs4iy3ipvi41cmkv8vg145cpafjrsf98kj7jg4pmv"; depends=[backports BBmisc checkmate curl data_table digest httr jsonlite memoise mlr ParamHelpers stringi XML]; }; OpenMPController = derive2 { name="OpenMPController"; version="0.2-5"; sha256="00hs8v47pr2d726z8izkfrgmayw147hdm16rr9rw1zs3ad216zjj"; depends=[]; }; - OpenMx = derive2 { name="OpenMx"; version="2.8.3"; sha256="0kz1x3x43jf326x7l8lb7rlnng4r5cp11vrs1pnnxkmbhqzbbwy8"; depends=[BH digest MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; + OpenMx = derive2 { name="OpenMx"; version="2.9.6"; sha256="0141q6rwppwab426fn65vcnj06nivibl11aqi8dp32rcxgi5s9y8"; depends=[BH digest MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; OpenRepGrid = derive2 { name="OpenRepGrid"; version="0.1.10"; sha256="0ikw8l9hffcaa094y6pnvyc3ly5jb02djaakz668ba15a0yw0wmb"; depends=[abind colorspace GPArotation plyr psych pvclust rgl stringr XML]; }; OpenStreetMap = derive2 { name="OpenStreetMap"; version="0.3.3"; sha256="099vdyq0vw9xl5v7zggdb8yd4zl7x8imvvbj5j2f5hrspgg131pz"; depends=[ggplot2 raster rgdal rJava sp]; }; Opportunistic = derive2 { name="Opportunistic"; version="1.2"; sha256="0kaj11ziij1v65l972x4kbr7vzkx4dwa27ymabiip4dg57a976wr"; depends=[]; }; @@ -2360,7 +2413,7 @@ in with self; { OptHedging = derive2 { name="OptHedging"; version="1.0"; sha256="0g7qaf5abvbcqv2h1dciwn3gwpz084ryqjjk0yabdm4ym0y38ddm"; depends=[]; }; OptInterim = derive2 { name="OptInterim"; version="3.0.1"; sha256="1ks24yv5jjhlvscwjppad27iass59da1mls99hlif0li9mvkbvyk"; depends=[clinfun mvtnorm]; }; OptSig = derive2 { name="OptSig"; version="1.0"; sha256="1jmnxwci4rzlwgnq4zxhkii9j7ch1bymx44hk3qv7ws24k7g87nn"; depends=[pwr]; }; - OptimClassifier = derive2 { name="OptimClassifier"; version="0.1.2"; sha256="0yf3wk0y650cyp5x8jvjr4ncq34phka8z0r9zk9cjn1k0ic2zmjc"; depends=[car clisymbols crayon dplyr e1071 lme4 MASS nnet nortest rpart]; }; + OptimClassifier = derive2 { name="OptimClassifier"; version="0.1.4"; sha256="0f1szin0isji60gvb0zi240gri6fc4y1s71n96dn5wacdx5b8mhb"; depends=[clisymbols crayon dplyr e1071 ggplot2 lme4 lmtest MASS nnet nortest rpart]; }; OptimaRegion = derive2 { name="OptimaRegion"; version="0.2"; sha256="0xhl7jp2429007jzx305ggfwyx0vh2vxw7l2a7f3c0prklhyqpqc"; depends=[boot DepthProc fields nloptr rsm spam]; }; OptimalCutpoints = derive2 { name="OptimalCutpoints"; version="1.1-3"; sha256="1vrbx62080r9sgk9ipjvdrqvikp4gwidp5gi5j92hspk7cp10amg"; depends=[]; }; OptimalDesign = derive2 { name="OptimalDesign"; version="0.2"; sha256="1gpcasdbcgqqr1l6f63q4jqva28rpz0cbgs1f4l3bizldd9kf4kh"; depends=[]; }; @@ -2413,10 +2466,10 @@ in with self; { PCDimension = derive2 { name="PCDimension"; version="1.1.8"; sha256="1359cmswynv9xqbfb60kh32ifm9wgm20iplkdfzf5v2c4vxd0rmf"; depends=[changepoint ClassDiscovery cpm kernlab oompaBase]; }; PCFAM = derive2 { name="PCFAM"; version="1.0"; sha256="196jzv0f6j60zkyagm9n98339ipn8mrhmhl3q4g053z8f6mm9zmv"; depends=[]; }; PCGSE = derive2 { name="PCGSE"; version="0.4"; sha256="0ky1nzhz6v9n34kas9nw2scc6ip7av19g09zcsxaa9436nhip4f6"; depends=[MASS RMTstat safe]; }; - PCICt = derive2 { name="PCICt"; version="0.5-4"; sha256="1g17hxs00dlnb6p0av6l7j99qy00555f80nk1i1i1x87fszp3axa"; depends=[]; }; + PCICt = derive2 { name="PCICt"; version="0.5-4.1"; sha256="17ipmv6ps7c9dv4k9kxjjynnlgr63baz9z9ndwfg0lckc3vw81ya"; depends=[]; }; PCIT = derive2 { name="PCIT"; version="1.5-3"; sha256="0gi28i2qd09pkaja4w7abcl7sz43jnk98897vc2905fnk9nks65j"; depends=[]; }; PCMRS = derive2 { name="PCMRS"; version="0.1-1"; sha256="10n4am4qm23aaghf8awv2llcq7392s62yr6mf5h8nf18hfz29wrn"; depends=[cubature ltm mvtnorm Rcpp RcppArmadillo statmod]; }; - PCPS = derive2 { name="PCPS"; version="1.0.3"; sha256="1ys3xp1nripy5zkq25byak9k6yf5rdbfnww8j13yc469428ip8q0"; depends=[ape phylobase picante SYNCSA vegan]; }; + PCPS = derive2 { name="PCPS"; version="1.0.5"; sha256="1v5173zskkyc79b68a3x0b1harq5xp4igisf94ajgqqmkpf61qcp"; depends=[ape phylobase picante RcppArmadillo SYNCSA vegan]; }; PCRedux = derive2 { name="PCRedux"; version="0.2.5-1"; sha256="1p5qmz09ajbm1iypyz5rn9bwzbbx57gc6a0xzrm900dw2r2cf7ph"; depends=[bcp changepoint chipPCR ecp fda_usc FFTrees magrittr MBmca pbapply plotly pracma qpcR robustbase testthat visdat zoo]; }; PCS = derive2 { name="PCS"; version="1.2"; sha256="0488h6s1yz6fwiqf88z2vgckn6i0kwls8cazmpw3wspnaqvl2n4s"; depends=[multtest statmod]; }; PCSinR = derive2 { name="PCSinR"; version="0.1.0"; sha256="1z8yjryw3c43vc6fxcwiindmyq6r63pc1zr3aybwmys6mv697bb4"; depends=[]; }; @@ -2433,10 +2486,11 @@ in with self; { PGM2 = derive2 { name="PGM2"; version="1.0-1"; sha256="03282pcq7gw47awc2mxjsbz6w3zpqjhqd7fzg8la4p00cd0vvmr4"; depends=[]; }; PGRdup = derive2 { name="PGRdup"; version="0.2.3.3"; sha256="1s0v44922zpxl3w9kzn9xzvs5jldg35gjrnlf89f89i3rs59gg98"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; }; PHENIX = derive2 { name="PHENIX"; version="1.3.1"; sha256="1gd9ycrwawi81al4f5v559km1112giwqnwvvk8ynj4kdb5bqpyq4"; depends=[ppcor SuppDists]; }; - PHYLOGR = derive2 { name="PHYLOGR"; version="1.0.8"; sha256="17lmjfbwf8j68zzzhdvppyjacdsmy4zmcfj0pcjsw5j6m361hvh6"; depends=[]; }; + PHYLOGR = derive2 { name="PHYLOGR"; version="1.0.10"; sha256="17q760k5519alr2skvpnghz3c9jgw07lh5fpw4xf6hjk3qlqq82c"; depends=[]; }; PHeval = derive2 { name="PHeval"; version="0.5.3"; sha256="1zq4ks6w5vrhy1f170fv16zgrgi1lfxmkpfkg75sjin7asw4i7a9"; depends=[survival]; }; PIGE = derive2 { name="PIGE"; version="1.1"; sha256="0pc24rvvxzpgrsx7xsj98n5vd462hjggakzwp36qdkib69yyr4bn"; depends=[ARTP snowfall survival xtable]; }; PIGShift = derive2 { name="PIGShift"; version="1.0.1"; sha256="115dnsh4b1rxx1d2kc8x3vl5366h5f0i6gg8l1w3v0f8309qigis"; depends=[ape mvtnorm]; }; + PINSPlus = derive2 { name="PINSPlus"; version="1.0.0"; sha256="1vyn6hz4b0gzpvs6m0lbs09vv8531z74vkm2ss1244gn991p7iif"; depends=[cluster doParallel entropy foreach pbmcapply]; }; PIPS = derive2 { name="PIPS"; version="1.0.1"; sha256="1c5v3s6xys9p1q32k6mpsffhi9gwsq951rh12hs76dmak862yspc"; depends=[]; }; PK = derive2 { name="PK"; version="1.3-4"; sha256="1zkjq64p34gzbsbmbdqphssnplzz65wpl486qf4yhawnb4wnkj1v"; depends=[]; }; PKI = derive2 { name="PKI"; version="0.1-5.1"; sha256="1xs3jxbczhkxnp7cyw2yh1jcwha92y9pdsbka1ligbla70bnvxyj"; depends=[base64enc]; }; @@ -2454,14 +2508,15 @@ in with self; { PMA = derive2 { name="PMA"; version="1.0.9"; sha256="11qwgw4sgzl3xhrm468bsza83h3mfn89157nfwnrassl7qr42xkq"; depends=[impute plyr]; }; PMCMR = derive2 { name="PMCMR"; version="4.2"; sha256="1dqfn68034xkik4xfl8mlqsh7x427f7cwna5axj8gvjcj9l48x8c"; depends=[]; }; PMCMRplus = derive2 { name="PMCMRplus"; version="1.0.0"; sha256="11sliznixsrrlr0y365hxpg64jfva8l1ilrnkdd32ddy8713sin7"; depends=[BWStest gmp kSamples MASS multcompView mvtnorm Rmpfr SuppDists]; }; - PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.4.0"; sha256="1lr7ycsjp9dimkbxfapl1qpvlvl0771rdipaf26sgi7iabqpz5b4"; depends=[dplyr magrittr RCurl readr readxl survey timeDate]; }; + PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.4.1.1"; sha256="038xylgq3mp1nl5rf11swprv08khvzfw0jg5bmd0yvqmygr082jq"; depends=[dplyr magrittr RCurl readr readxl survey timeDate]; }; POET = derive2 { name="POET"; version="2.0"; sha256="0w3jhj45sxisyrpcsazbrbcsz7rmraw71jjm0zixbcgc4klb98ar"; depends=[]; }; POMaSPU = derive2 { name="POMaSPU"; version="1.0.0"; sha256="0jz3jgzdykv0xvfw3ix0hbs32as6dp7p5v8bj5nddknx10d0siya"; depends=[MASS matrixStats Rcpp RcppArmadillo]; }; POPdemog = derive2 { name="POPdemog"; version="1.0.3"; sha256="0j83c853ligmw8ag4pb0vj46sfn2w2ynh4wvgkabzs688hxxni8r"; depends=[]; }; POT = derive2 { name="POT"; version="1.1-6"; sha256="08av53rnishk3mhwrb6ydbgc3n9nwi87jlx5vmag3vpiidhn1laj"; depends=[]; }; PP = derive2 { name="PP"; version="0.6.1"; sha256="10innn1nhc4zqimd0gww7k3k30jkfkkj89zkddcjqa2sqq5gs3xr"; depends=[Rcpp]; }; PP3 = derive2 { name="PP3"; version="1.2"; sha256="1g36al9w1rxyhfzbvpw9siqq57h2xl0zr94wysz8i0jzqkkqkrvf"; depends=[]; }; - PPCI = derive2 { name="PPCI"; version="0.1.1"; sha256="1f3jmrkszjq6ajbl0kjf5rghiliim96wz53mfrjjvpc6piajs5ym"; depends=[rARPACK]; }; + PPCI = derive2 { name="PPCI"; version="0.1.2"; sha256="1k6kbln0h1wkzg594k1db6r3nk5dqwhg8gm1hgval05dsdhp8j8b"; depends=[rARPACK]; }; + PPRL = derive2 { name="PPRL"; version="0.3.5"; sha256="1j8qfa6ipk9x6w7g5y0lz14cf72s2zpkrp5gk2qbvx1pm3w1zyh6"; depends=[Rcpp settings]; }; PPforest = derive2 { name="PPforest"; version="0.1.0"; sha256="1s0g8icyx30sih2xbdihp9xbmygfgd1hs642qdl5559fqshylbzs"; depends=[doParallel dplyr magrittr plyr Rcpp RcppArmadillo tidyr]; }; PPtree = derive2 { name="PPtree"; version="2.3.0"; sha256="002qjdx52r2h90wzrf2r3kz8fv3nwx08qbp909whn6r4pbdl532v"; depends=[MASS penalizedLDA]; }; PPtreeViz = derive2 { name="PPtreeViz"; version="2.0.3"; sha256="1x5rcls49jz19y3h98n2k4kypm8mv8p586clhdj62bvp2nl8wg3x"; depends=[ggplot2 gridExtra partykit Rcpp RcppArmadillo]; }; @@ -2475,9 +2530,8 @@ in with self; { PROscorer = derive2 { name="PROscorer"; version="0.0.1"; sha256="0mgj0mi0vzdk0agimsx4k9i4bss0j5lqiayzhldr1hrqrx2a4f3d"; depends=[PROscorerTools]; }; PROscorerTools = derive2 { name="PROscorerTools"; version="0.0.1"; sha256="1vliffkfqdn5l96bncfgayv19i20kmawlxi8q853wamj6npdpv5r"; depends=[]; }; PRROC = derive2 { name="PRROC"; version="1.3"; sha256="03hvh92lq4i4w4mla9bvwrwb4626f4hvlxgdn57hamp70960vjyc"; depends=[]; }; - PReMiuM = derive2 { name="PReMiuM"; version="3.1.6"; sha256="14y3c5l050szdm2zh88byzawrfc224j4dr4msc5a5vh10bsa1wd9"; depends=[ald BH cluster gamlss_dist ggplot2 plotrix Rcpp RcppEigen]; }; + PReMiuM = derive2 { name="PReMiuM"; version="3.1.7"; sha256="1l2ibwn5z647dwhrjzgrz3qqzdbkqk3zrpn95hy4ysa32pdz300n"; depends=[ald BH cluster gamlss_dist ggplot2 plotrix Rcpp RcppEigen]; }; PResiduals = derive2 { name="PResiduals"; version="0.2-5"; sha256="05jk543lv8isbxv24cbzqh80l6xs05lx2k9xzz7s0121vb2yd3v4"; depends=[Formula MASS rms SparseM]; }; - PSAboot = derive2 { name="PSAboot"; version="1.1.4"; sha256="1zfqpq0ibgazwppbxbmqvkvh9j5421xmj9132zghxki0xdy655ss"; depends=[ggplot2 ggthemes Matching MatchIt modeltools party PSAgraphics psych reshape2 rpart TriMatch]; }; PSAgraphics = derive2 { name="PSAgraphics"; version="2.1.1"; sha256="05c0k94dxddyrhsnhnd4jcv6fxbbv9vdkss2hvlf3m3xc6jbwvh9"; depends=[rpart]; }; PSCBS = derive2 { name="PSCBS"; version="0.63.0"; sha256="0pgha1rvb9nfxkr8fxc17zgws781qwmrl01rss7bd0sf2n2lw2k2"; depends=[aroma_light DNAcopy future listenv matrixStats R_cache R_methodsS3 R_oo R_utils]; }; PSF = derive2 { name="PSF"; version="0.4"; sha256="1hjry8vjqr6zk2i2ppf3fcpsr4v4jm1705qv6i1iz2agl6g2rcnp"; depends=[cluster data_table forecast knitr]; }; @@ -2491,10 +2545,10 @@ in with self; { PTAk = derive2 { name="PTAk"; version="1.2-12"; sha256="1phxh2qbzsj2ia2dr6z30lhi765lk1m8lbk57sdgvm14fmi9v5nk"; depends=[tensor]; }; PTE = derive2 { name="PTE"; version="1.6"; sha256="0y2zqvm2d9minpc22ndq6mar3brbv9k6s1apl19zwpc8h5g3jx5l"; depends=[doParallel foreach survival]; }; PTXQC = derive2 { name="PTXQC"; version="0.92.3"; sha256="1spkbjji36s2dlhm5b8svpnjmana2jy1ppa0pfgjg7rpsp3369xq"; depends=[data_table ggdendro ggplot2 gridExtra gtable kableExtra knitr plyr proto RColorBrewer reshape2 rmarkdown seqinr yaml]; }; - PUlasso = derive2 { name="PUlasso"; version="2.2"; sha256="0chk26ll134fqvaqdwdnm49vbvklbrxm0j0qkcydm166p24k8n2z"; depends=[BH Matrix Rcpp RcppEigen]; }; + PUlasso = derive2 { name="PUlasso"; version="3.1"; sha256="0cnnv9laga24h01aqkk7kzmmv2x5cgcq5l45w8vj5pvfyhvm4067"; depends=[BH doParallel foreach Matrix Rcpp RcppEigen]; }; PVAClone = derive2 { name="PVAClone"; version="0.1-6"; sha256="0fj5p3z2cwnyshrr4rq88wpij2xax5p4aq0x4p342kadx9d6x2ga"; depends=[coda dclone dcmle]; }; PWD = derive2 { name="PWD"; version="1.0"; sha256="0ksr3biaqd4p5a4lv28i4cwk1fn9822ndq2161mgvc1c344p06fj"; depends=[Rcpp RcppArmadillo]; }; - PWEALL = derive2 { name="PWEALL"; version="1.2.0"; sha256="0h7azgns88qwgdp41v35v6293xqs2hksbr82p15n754ci2hsvzja"; depends=[survival]; }; + PWEALL = derive2 { name="PWEALL"; version="1.2.1"; sha256="08a7ih9yyp0dqw89n1qhwbxhgiks91c3wjbaz08b6ck6cv6gzy6k"; depends=[survival]; }; PWFSLSmoke = derive2 { name="PWFSLSmoke"; version="1.0.16"; sha256="015zqbq9wsg0wc1y5s4x8vc7klkfa928xcl23v732vy28j0jf20h"; depends=[cluster dplyr dygraphs futile_logger ggmap httr jsonlite leaflet lubridate magrittr mapproj maps maptools MazamaSpatialUtils openair png raster RColorBrewer readr reshape2 rgdal RgoogleMaps sp stringr xts zoo]; }; PabonLasso = derive2 { name="PabonLasso"; version="1.0"; sha256="158xg9i13nqy1bnpch8r6a7yas01hsdidmcypgccmyh7d7l52mr1"; depends=[]; }; Pade = derive2 { name="Pade"; version="0.1-4"; sha256="1kx5qpxd3x43bmyhk8g2af44hz3prhnrzrm571kfjmak63kym741"; depends=[]; }; @@ -2534,7 +2588,7 @@ in with self; { PenCoxFrail = derive2 { name="PenCoxFrail"; version="1.0.1"; sha256="0snjf8jxzyf30xj3wx9p6g073dqw592l1j1c6yxfg8y4kgzhzwq7"; depends=[Matrix Rcpp RcppArmadillo survival]; }; PepPrep = derive2 { name="PepPrep"; version="1.1.0"; sha256="1s2xn05xry50l9kf1mj6yd1dpc7yp6g3d00960hswvhznb0a4l84"; depends=[biomaRt stringr]; }; PepSAVIms = derive2 { name="PepSAVIms"; version="0.9.1"; sha256="0m4jrq6wcjy0k80gvrnm9f7kvi1ifx9182xfq0psyaxpj0ggvzij"; depends=[elasticnet]; }; - Peptides = derive2 { name="Peptides"; version="2.2"; sha256="0fdc8xd0c6x1m1r3bj9098m6g5ay15ig53z0wib2lvxlcnh2xpjs"; depends=[Rcpp]; }; + Peptides = derive2 { name="Peptides"; version="2.3"; sha256="17nbjh06vi4syb0hlg7y646xik4csp3fs6r6z0c676k5sxs33mrd"; depends=[Rcpp]; }; PerFit = derive2 { name="PerFit"; version="1.4.1"; sha256="0mzd9yrgsswxlhljlk8nxi0dhy3k4a9jax9w9c9s29j4m7z9jf01"; depends=[fda Hmisc irtoys ltm MASS Matrix mirt]; }; PerMallows = derive2 { name="PerMallows"; version="1.13"; sha256="0ny2vc8f0npixaw1kp2d93xr4g46nsg8jjwvi6afv9xjvaz0i6wy"; depends=[Rcpp]; }; Perc = derive2 { name="Perc"; version="0.1.2"; sha256="0p6l4b536jjz4lmgsdrxqsh77lx4vkb6hbyd6vhbc102m5x3b1yc"; depends=[]; }; @@ -2545,7 +2599,7 @@ in with self; { PersomicsArray = derive2 { name="PersomicsArray"; version="1.0"; sha256="1d5gxd65b01m13rgbdhk6w3l43vqcbdk0s1pbgc8h6cnipj55z0i"; depends=[jpeg raster stringr tiff]; }; PhViD = derive2 { name="PhViD"; version="1.0.8"; sha256="038pw24sb8ja8pbbmj05rww6413i2ljybb2dxwgrpffv22aqawmc"; depends=[LBE MCMCpack]; }; PharmPow = derive2 { name="PharmPow"; version="1.0"; sha256="0gabkd8p4zsig9p697lyk8m2jxb5abjk81rpzd5ih1yk1qanhsn5"; depends=[scatterplot3d]; }; - Phase123 = derive2 { name="Phase123"; version="1.4"; sha256="1iw0xgfsvfzrhcnfxvq6rcwfcycyvc2bbg8d7g2spvvjk7aa4bwd"; depends=[Rcpp RcppArmadillo survival]; }; + Phase123 = derive2 { name="Phase123"; version="1.5"; sha256="05yvzx0sf6dq47nr5bk1kd2icndf20z39y9fj90zqdm3ay2hi586"; depends=[Rcpp RcppArmadillo survival]; }; PhaseType = derive2 { name="PhaseType"; version="0.1.3"; sha256="092dqyqfaxj8qpwxcjb5cayhnq597rfjz1xb93ps4nrczycqs0l6"; depends=[coda ggplot2 reshape]; }; PhenotypeSimulator = derive2 { name="PhenotypeSimulator"; version="0.2.0"; sha256="1vnissx2p10w2w435vr2jqw50cs5518l1gpq4pkyyxckcrd300w9"; depends=[data_table dplyr ggplot2 mvtnorm optparse R_utils Rcpp reshape2 snpStats zoo]; }; Phxnlme = derive2 { name="Phxnlme"; version="1.0.0"; sha256="0h9mi8p95rp1s8xsdv38j9fpy2cy9zvjnldjmnj0n469kimp2782"; depends=[ggplot2 gridExtra lattice manipulate testthat]; }; @@ -2555,10 +2609,10 @@ in with self; { PhylogeneticEM = derive2 { name="PhylogeneticEM"; version="1.1.0"; sha256="0ji78zx0gp1nd5assrmwxdkxryfjijnn9g34w2g2qv32s1fdj6ak"; depends=[ape capushe foreach glmnet grplasso LINselect MASS Matrix plyr Rcpp RcppArmadillo robustbase]; }; PhysActBedRest = derive2 { name="PhysActBedRest"; version="1.0"; sha256="0gmqh700cf6aiagb45iyyf85pgp3b86fx7fbv9lrsm4mda0r8h75"; depends=[chron lubridate stringr]; }; PhysicalActivity = derive2 { name="PhysicalActivity"; version="0.1-1"; sha256="1aqyip7psf3pdrxkpidfldkk9naihvnc7s3n6w6vvr9h1l5mpmvc"; depends=[]; }; - PieceExpIntensity = derive2 { name="PieceExpIntensity"; version="1.0.1"; sha256="0agy9jp5vbh6cj5mipbmn11m69w4ydz91nprph0jyf1drl92730h"; depends=[Rcpp RcppArmadillo]; }; + PieceExpIntensity = derive2 { name="PieceExpIntensity"; version="1.0.2"; sha256="04l1id872mlgpid746l8dz2wdcjxh79cqw835gsph6ngxg0g8qp6"; depends=[Rcpp RcppArmadillo]; }; Pijavski = derive2 { name="Pijavski"; version="1.0"; sha256="1027lmmk17br9zxah980j6l3k2p92065bwigw6gpy9g0g5jjl4f1"; depends=[Rcpp]; }; PivotalR = derive2 { name="PivotalR"; version="0.1.18.3"; sha256="14l7y57zmfr7h4bq01j83am2plxx320kkhbsh0x2ypif9dni4rf2"; depends=[Matrix]; }; - PlackettLuce = derive2 { name="PlackettLuce"; version="0.2-2"; sha256="0lzgffw5kbx9psd68r7yigqv8dszjb2xkayxm3rhfs8jv9309yr0"; depends=[igraph MASS Matrix partykit psychotools qvcalc rARPACK sandwich]; }; + PlackettLuce = derive2 { name="PlackettLuce"; version="0.2-3"; sha256="1w2ihclnh3x83ip4hh95bchv5j832cqy6n140q5q1dbfz6fy1bxv"; depends=[igraph MASS Matrix partykit psychotools psychotree qvcalc rARPACK sandwich]; }; Planesmuestra = derive2 { name="Planesmuestra"; version="0.1"; sha256="0v7l4hrfckcf7zmk0ihq2ij0qli7x12j17vd6752d1yjk27fgk57"; depends=[]; }; PlasmaMutationDetector = derive2 { name="PlasmaMutationDetector"; version="1.6.10"; sha256="1dqc6k7mq9k6g9gndgjm6cf61mgl0liy4qwpzragbhq6lym8hw6w"; depends=[GenomicRanges ggplot2 robustbase Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; Plasmidprofiler = derive2 { name="Plasmidprofiler"; version="0.1.6"; sha256="10m3knmz0596rm30ncyfprar6l42bjm7r34n4pjz1biqmiz6yz6k"; depends=[ape dplyr gdata ggdendro ggplot2 gridExtra gtable htmlwidgets magrittr plotly plyr RColorBrewer reshape2 stringr]; }; @@ -2579,7 +2633,7 @@ in with self; { PoloniexR = derive2 { name="PoloniexR"; version="0.0.1"; sha256="1qik272z5lmzv9k1kfr5v0m8sydbdhbrc732n1zpwnqc1spfqb20"; depends=[anytime digest httr jsonlite RApiDatetime xts zoo]; }; PolyPatEx = derive2 { name="PolyPatEx"; version="0.9.2"; sha256="1z1hwvsw7b6cz5xfy35a5ldrzb3fhp3swiyz56v1zqblpsaz8n9g"; depends=[gtools]; }; PolyTrend = derive2 { name="PolyTrend"; version="1.2"; sha256="17n6phkzgaqrlzs8x1l5smnij1gxfklr0zj9pqfy5n8xqnpwssm5"; depends=[]; }; - Polychrome = derive2 { name="Polychrome"; version="1.0.0"; sha256="09yxrwh7a5hgq52jv2d0b0jvwbgm1f1dg6w4vziwdx5cwyny9psl"; depends=[colorspace rgl]; }; + Polychrome = derive2 { name="Polychrome"; version="1.1.0"; sha256="1a0ifbvkw85sxwc8zjj8hy88avmqyjsfxk2cd16qsp0p9wfn872y"; depends=[colorspace scatterplot3d]; }; PolynomF = derive2 { name="PolynomF"; version="1.0-1"; sha256="0sr5v43hp1ydy2230vm3mrg4pnnv7nivhnp3zni9svc8g0bd8z8p"; depends=[]; }; Pomic = derive2 { name="Pomic"; version="1.0.4"; sha256="0xy5fgimbgqqac3n7akhwyvnrvd9fpvx9h8nk4spxrxc8x0km1w7"; depends=[]; }; PooledMeanGroup = derive2 { name="PooledMeanGroup"; version="1.0"; sha256="0i9s7qskjnji3mf6clsi69rnni57v8cysgr9gh3hvxjzlf1sq8y7"; depends=[]; }; @@ -2595,21 +2649,20 @@ in with self; { PortfolioOptim = derive2 { name="PortfolioOptim"; version="1.0.3"; sha256="1s9msqjxqxqafhncc3hi5prhzl5cj0incd5rc9fxc23l5l4n9xjx"; depends=[Rglpk]; }; PottsUtils = derive2 { name="PottsUtils"; version="0.3-3"; sha256="165k4sjh3kqkb8bzi68wx00yl77yfbgs70fcbpzmsmcw4g4hdpzn"; depends=[miscF]; }; PoweR = derive2 { name="PoweR"; version="1.0.6"; sha256="0p2v07wp1hqmmbf7b3mh0v4n5hbbcms9xkdhjzdfxkkbafxybc24"; depends=[Rcpp RcppArmadillo]; }; - Power2Stage = derive2 { name="Power2Stage"; version="0.4-6"; sha256="1fzzvv3c7z9fb63l0wz9i0vd413mfn1dzw19kw7rnldv773lwir1"; depends=[mvtnorm PowerTOST]; }; + Power2Stage = derive2 { name="Power2Stage"; version="0.5-1"; sha256="155w5yp0pdq4g3638m0c54i81lfk0g0f339hzbxpkxhs8ds7g2zv"; depends=[cubature mvtnorm PowerTOST]; }; PowerNormal = derive2 { name="PowerNormal"; version="1.2.0"; sha256="1kryqcjvgwk0l4z3gqxdiz47mha3jw5583jlb9z7ml6v7cam06sm"; depends=[]; }; - PowerTOST = derive2 { name="PowerTOST"; version="1.4-6"; sha256="0fy9g1zkkxx45pz7axyhv9v9yajfwi19pxcr2bc9dih3j41kazjr"; depends=[cubature mvtnorm TeachingDemos]; }; + PowerTOST = derive2 { name="PowerTOST"; version="1.4-7"; sha256="02k6jn5dw70518g55bchax0l5gkci827lqwwyxwnn6rzs3mx4ybs"; depends=[cubature mvtnorm TeachingDemos]; }; PowerUpR = derive2 { name="PowerUpR"; version="0.2.3"; sha256="046p4mrw50k1a0m672i2zx5vxfpyggiazp95qz8kx6bnq472ixp2"; depends=[]; }; PracTools = derive2 { name="PracTools"; version="0.8"; sha256="0hmdsm1ya6fw0f2fv4b85bkr35vlqmjf1sd9jmw1d4izpifv187h"; depends=[]; }; PreKnitPostHTMLRender = derive2 { name="PreKnitPostHTMLRender"; version="0.1.0"; sha256="1749cd734f4bf0n4068s2m617k6as8h9bwp44mm3la2xy3vjf5g1"; depends=[knitr rmarkdown XML]; }; PreProcess = derive2 { name="PreProcess"; version="3.1.4"; sha256="0zvy7wx9wfsdcvnjdr1angh0shqwhlm48byc0ymciqlx6xagaw0b"; depends=[oompaBase]; }; - PreciseSums = derive2 { name="PreciseSums"; version="0.1"; sha256="14d42n1wby1srrjyi0yc565g2ldmxy3r3z5bf7ki2x6snj569n0g"; depends=[]; }; + PreciseSums = derive2 { name="PreciseSums"; version="0.3"; sha256="02w0pa9dd196sg6zg9w2fp4b0k6wibbw9rbvasr3aphh98kbd6ch"; depends=[]; }; PredPsych = derive2 { name="PredPsych"; version="0.3"; sha256="0bqc2vl32z9wzby7ncrab742cajy4w5kq7wv2gh2jjqdnv9nkia7"; depends=[caret e1071 ggplot2 MASS mclust party plyr randomForest rpart statmod]; }; PredictABEL = derive2 { name="PredictABEL"; version="1.2-2"; sha256="08c7j2in1wlas6nmy44s08cq86h5fizqbhsnq312dllqdzmb2h9s"; depends=[epitools Hmisc PBSmodelling ROCR]; }; - PredictTestbench = derive2 { name="PredictTestbench"; version="1.1.3"; sha256="14np4zvr0labhqxzsv07iqzldfxmnsfk91qpfqz7vyiq0vwcymp4"; depends=[forecast ggplot2 imputeTestbench PSF reshape2]; }; PredictiveRegression = derive2 { name="PredictiveRegression"; version="0.1-4"; sha256="15vkisj3q4hinc3d537s8inhj3wk62q67qhy050xmp9j563ainmd"; depends=[]; }; PresenceAbsence = derive2 { name="PresenceAbsence"; version="1.1.9"; sha256="17qn4ggkr5aqml45nkihj1j35y479ywkm1xcfkb2g8ky66jb0c0s"; depends=[]; }; PrevMap = derive2 { name="PrevMap"; version="1.4.1"; sha256="1hmvfk5zpflwncaiy2rr0jr2gr2gk66na6ks82b6dfgk8xdc8xmk"; depends=[geoR Matrix maxLik numDeriv pdist raster splancs truncnorm]; }; - PrivateLR = derive2 { name="PrivateLR"; version="1.2-21"; sha256="1jwq8f0dnngj8sfbmcmxy34nkkq6yjw0mq3w1f8rasz67v3bwzp3"; depends=[]; }; + PrivateLR = derive2 { name="PrivateLR"; version="1.2-22"; sha256="0d142fa3wk7yadvs8jszajs6hq9m03p0j6h5r4pbw7j0d1l72hgc"; depends=[]; }; ProDenICA = derive2 { name="ProDenICA"; version="1.0"; sha256="04gnsnd0xzw3bfbssdp06bar0lk305ry2c97pmwxgiz3ay88dfsj"; depends=[gam]; }; ProFit = derive2 { name="ProFit"; version="1.1.1"; sha256="0krnxdf9dddry4a5k1dag43va7lii1ykk0857kk1dfnl56sm3l51"; depends=[celestial fftw FITSio LaplacesDemon magicaxis R2Cuba RColorBrewer Rcpp]; }; ProFound = derive2 { name="ProFound"; version="1.0.1"; sha256="0ym8ggzm0b8zpfsq8xjjnwa09826gssaqhrqjyq88pwbhzh0y4pl"; depends=[celestial data_table FITSio magicaxis]; }; @@ -2636,11 +2689,11 @@ in with self; { PtProcess = derive2 { name="PtProcess"; version="3.3-13"; sha256="0vk1n7hk6v592fi5ld70db6m92zgpjx97axs5h8p53c29984qhwz"; depends=[]; }; PubBias = derive2 { name="PubBias"; version="1.0"; sha256="0dr5dhfx57knrs05pbx9ngg4k2937n8gjzsgd0jfqd8dfxhy051k"; depends=[R_utils rmeta]; }; PubMedWordcloud = derive2 { name="PubMedWordcloud"; version="0.3.5"; sha256="0vpd48daamd9q3mdr59sx7zj86qcq2yx8bnrzblyx0ryqx6jnq8m"; depends=[RColorBrewer RCurl stringr tm wordcloud XML]; }; - Publish = derive2 { name="Publish"; version="2017.10.24"; sha256="14zbbchff4mjvsxs9c2bypqdsfbnnl6lvr0k5v50wkd00avnv9s7"; depends=[data_table lava multcomp prodlim survival]; }; + Publish = derive2 { name="Publish"; version="2018.04.17"; sha256="0dbcql2mi2qsxzcgcqa58yqynfq1800fa06ikyay2dm6gdyf0apq"; depends=[data_table lava multcomp prodlim survival]; }; PurBayes = derive2 { name="PurBayes"; version="1.3"; sha256="0nbm4cyrwfbwwbjbjkylr86cshaqbvbif6dkp4fag8kbcgyyx5qh"; depends=[rjags]; }; - PwrGSD = derive2 { name="PwrGSD"; version="2.2"; sha256="0z42l7vb3yya59g9rymypfzjbbs5zkknwgcl710rqa64l421sp8z"; depends=[survival]; }; + PwrGSD = derive2 { name="PwrGSD"; version="2.3"; sha256="1iisib4bnb3fp0nwxnal13fgd0fs1vckchr4cj716k72jh6k7slm"; depends=[survival]; }; PythonInR = derive2 { name="PythonInR"; version="0.1-4"; sha256="0krr5k0y9rggzq8f74nc6pyf47g8va1lvva31vc774hbb0rmr7gf"; depends=[pack R6]; }; - QCA = derive2 { name="QCA"; version="3.1"; sha256="1nfwfv19rjqba28kmz9yk78zaq9jiiap8yhr0qcpf41q7381sn7q"; depends=[fastdigest shiny venn]; }; + QCA = derive2 { name="QCA"; version="3.2"; sha256="1bjsc24b3g7xdb1fi3f4y1297g185gasl3xsgqxibck2zjlagl11"; depends=[fastdigest shiny venn]; }; QCAfalsePositive = derive2 { name="QCAfalsePositive"; version="1.1.1"; sha256="03qzb6vdnbri52gfx3laz14988p2swdv9m8i5z7gpsv3f3bjrxbp"; depends=[]; }; QCApro = derive2 { name="QCApro"; version="1.1-2"; sha256="1glfb1x1h05cs07nq5glqvlil58wp3c0kaxi1l7k94y797i8r7hq"; depends=[lpSolve]; }; QCAtools = derive2 { name="QCAtools"; version="0.2.3"; sha256="1q49l2mf02hqvz2ahqjdx7i3yxniy7dn2s74xjl9l6zdq8bypfw2"; depends=[directlabels ggplot2 QCA stringr]; }; @@ -2659,26 +2712,26 @@ in with self; { QRAGadget = derive2 { name="QRAGadget"; version="0.1.0"; sha256="0vmhbpfbbpbcs6s9zjam893yl54spbx4x4698c504g96hcc19kkp"; depends=[htmlwidgets leaflet magrittr miniUI raster scales shiny sp]; }; QRM = derive2 { name="QRM"; version="0.4-13"; sha256="0zxhm1bdbs4jizd909vw9yjdn484vmcrwcmpk3a7gr4142q9kdjh"; depends=[gsl Matrix mgcv mvtnorm numDeriv Rcpp timeDate timeSeries]; }; QRank = derive2 { name="QRank"; version="1.0"; sha256="1f924r5bf5vjfl12hk1n5m3f94g30f6vmvzq2bn8295dflyndck0"; depends=[quantreg]; }; - QRegVCM = derive2 { name="QRegVCM"; version="1.1"; sha256="01dhc0r1nialwv7dp2108znyc3ip1hswkcbpf3kmabxxj5y4vyvx"; depends=[quantreg SparseM truncSP]; }; + QRegVCM = derive2 { name="QRegVCM"; version="1.2"; sha256="0fcydkf6r2qxd59ylr8vn76bkxks91v58gfzvq3rjd5mqf9vsaaq"; depends=[quantreg SparseM truncSP]; }; QSARdata = derive2 { name="QSARdata"; version="1.3"; sha256="0dhldnh0jzzb4assycc0l14s45ymvha48w04jbnr34lrwgr9krh4"; depends=[]; }; QTLRel = derive2 { name="QTLRel"; version="1.0"; sha256="0hlnh04w45imf0f7rm9pg1whlps5zxh00qvvn81hip16bv48cw79"; depends=[gdata lattice]; }; QUIC = derive2 { name="QUIC"; version="1.1"; sha256="021bp9xbaih60qmss015ycblbv6d1dvb1z89y93zpqqnc2qhpv3c"; depends=[]; }; QVM = derive2 { name="QVM"; version="0.1.1"; sha256="0dnr4h4084n505vrxfrx3czrkqdbna8s4fxpwr5czfilbfbxhpar"; depends=[gWidgets IMPACT ltm multilevel mvtnorm nlme pander psych]; }; QZ = derive2 { name="QZ"; version="0.1-6"; sha256="1vgqwv3rbnmz2sgbmbivgnxcwy5dzgk6ivqskdnqkil4f10zflmi"; depends=[Matrix]; }; QoLR = derive2 { name="QoLR"; version="1.0.3"; sha256="1z3wicybqsyczgjjd84g95bjxw80l5y8b68ayp300bm5jd4f2pha"; depends=[survival zoo]; }; - Qtools = derive2 { name="Qtools"; version="1.2"; sha256="0432ip73aldblq3yyig8d47a56j12fs30fpz8sxvfj186ssawych"; depends=[boot MASS mice quantreg]; }; + Qtools = derive2 { name="Qtools"; version="1.3"; sha256="1vbjydacgczjlsf8b8id25n3k0cq74i43nsvax22k8hbvj4g0b94"; depends=[boot MASS mice quantreg]; }; QuACN = derive2 { name="QuACN"; version="1.8.0"; sha256="1597blp8gqc5djvbgpfzi8wamvy0x50wh5amxj9cy99qa0jlglxi"; depends=[combinat graph igraph RBGL]; }; QualInt = derive2 { name="QualInt"; version="1.0.0"; sha256="1ms96m3nz54848gm9kdcydnk5kn2i8p1rgl2dwn7cqcqblfvsr4j"; depends=[ggplot2 survival]; }; Quandl = derive2 { name="Quandl"; version="2.8.0"; sha256="0n1c4343ki8nia7qrq2m9zb7b05qr3yjwvk1ji7m44sa613w6y5l"; depends=[httr jsonlite xts zoo]; }; QuantNorm = derive2 { name="QuantNorm"; version="1.0.3"; sha256="1kc8qfa5fwdmk4nfzlkd22968zn44ggr65ysm1l31bhbgjh59ly3"; depends=[]; }; QuantPsyc = derive2 { name="QuantPsyc"; version="1.5"; sha256="1i9bh88r8zxndzjqsj14qw64gnvm5a9kvhjhzk3qsrvl3qzjgh93"; depends=[boot MASS]; }; - QuantTools = derive2 { name="QuantTools"; version="0.5.6"; sha256="0ykfxrg4chq4n24spfj2v6cqiw5y7wps2rmnd0150fa6fqk7nd2k"; depends=[data_table fasttime R6 Rcpp RCurl readxl]; }; + QuantTools = derive2 { name="QuantTools"; version="0.5.7"; sha256="069rvh4yfar5dh6aj6p0q61gasvs9wr72x9pnj00lvyjlnv06p5n"; depends=[data_table fasttime R6 Rcpp RCurl readxl]; }; QuantifQuantile = derive2 { name="QuantifQuantile"; version="2.2"; sha256="01bdz8a6nhjil6n2z62x5g41v3d6md5v16g0ladsl5zc8raivqdq"; depends=[rgl]; }; QuantileGradeR = derive2 { name="QuantileGradeR"; version="0.1.1"; sha256="1zwc6bg636gk8zll7wpznd3pzl611hcj2fmzp8b9505rra13p0g2"; depends=[]; }; QuantumClone = derive2 { name="QuantumClone"; version="1.0.0.6"; sha256="1520jgkzp8g7gv7ggqhvlrdnpdyhygqjgsd1my5jq30afdqj6qmp"; depends=[DEoptim doParallel foreach fpc ggplot2 gridExtra NbClust optimx]; }; R_cache = derive2 { name="R.cache"; version="0.13.0"; sha256="1hf5cb7xvnca5zlh9245b5g62sgsaxwdhiv7x59yld37cydakm6k"; depends=[digest R_methodsS3 R_oo R_utils]; }; R_devices = derive2 { name="R.devices"; version="2.15.1"; sha256="09gmzb87n1ybqwyp4jdpih3w3s7nqkr4hd1qhcqr57kp2pj9jp9x"; depends=[base64enc R_methodsS3 R_oo R_utils]; }; - R_filesets = derive2 { name="R.filesets"; version="2.12.0"; sha256="16djdiwl4rpyhc75q2dpyfpzf2gwqkg9rbk99fbx69my1if0vs7w"; depends=[digest future_apply R_cache R_methodsS3 R_oo R_utils]; }; + R_filesets = derive2 { name="R.filesets"; version="2.12.1"; sha256="0grd3wk5xh7jgp10m78knj0snqyxqv7yir6wvz2wq5rabvcn9mab"; depends=[digest future_apply R_cache R_methodsS3 R_oo R_utils]; }; R_huge = derive2 { name="R.huge"; version="0.9.0"; sha256="13p558qalv60pgr24nsm6mi92ryj65rsbqa6pgdwy0snjqx12bgi"; depends=[R_methodsS3 R_oo R_utils]; }; R_matlab = derive2 { name="R.matlab"; version="3.6.1"; sha256="013qi3iikikgib23cqg74vpp2ymsbw1zd6zny7m1km2js6gmfchh"; depends=[R_methodsS3 R_oo R_utils]; }; R_methodsS3 = derive2 { name="R.methodsS3"; version="1.7.1"; sha256="11z6v2i7jl647wxi9p5z66yvfnnqv6s7fxqmz7w2gkb6j8wl1f24"; depends=[]; }; @@ -2696,13 +2749,13 @@ in with self; { R2HTML = derive2 { name="R2HTML"; version="2.3.2"; sha256="00kxny7hajs9r2kw63qk7d03ggdxx2j1g8vbrmzp806y8aczvik9"; depends=[]; }; R2MLwiN = derive2 { name="R2MLwiN"; version="0.8-5"; sha256="09p8xrxhcf6biy1mffv31p2hlr19s51f3n67az52f3xv5lyp9wm8"; depends=[coda digest doParallel foreach foreign lattice Matrix memisc rbugs texreg]; }; R2OpenBUGS = derive2 { name="R2OpenBUGS"; version="3.2-3.2"; sha256="1cxr93g0fkdv3lqdh63l2gcp7qn3q42pm1r6nzf35550k9ahkhnv"; depends=[boot coda]; }; - R2STATS = derive2 { name="R2STATS"; version="0.68-38"; sha256="1v8mvkvs4fjch0dpjidr51jk6ynnw82zhhylyccyrad9f775j2if"; depends=[cairoDevice gWidgets gWidgetsRGtk2 lattice latticeExtra lme4 MASS Matrix proto RGtk2Extras statmod]; }; R2SWF = derive2 { name="R2SWF"; version="0.9-2"; sha256="1f7bj2jqm7ys3rimgpsn252j39mw0xd008p3zqi77x1flisla0z3"; depends=[sysfonts]; }; R2WinBUGS = derive2 { name="R2WinBUGS"; version="2.1-21"; sha256="0k8k214x712vjj2k1am4zzf6scccs3b98ysiz4lwxpzm818wp1ps"; depends=[boot coda]; }; R2admb = derive2 { name="R2admb"; version="0.7.16"; sha256="0s8p82avxdp5zmkz7amvnphn3lcyhha31mbjghibnhm9g16k0b84"; depends=[coda lattice]; }; R2jags = derive2 { name="R2jags"; version="0.5-7"; sha256="0h1d27cddyacx5m5f23rlki97iwni7clffmb2k7a4bznlnjhn50a"; depends=[abind coda R2WinBUGS rjags]; }; R2ucare = derive2 { name="R2ucare"; version="1.0.0"; sha256="1nh2wf3syxjz9flxhf8x9fd2c2ndn4dha4k34lz1nq5j4qz7wfp1"; depends=[RMark stringr]; }; R330 = derive2 { name="R330"; version="1.0"; sha256="01sprsg7kph62abhymm8zfqr9bd6dhihrfxzgr4pzi5wj3h80bjm"; depends=[lattice leaps rgl s20x]; }; + R3port = derive2 { name="R3port"; version="0.1.1"; sha256="0ww0sqjx0la03qx353h0y5wr5qpc5fir3gjy4fsxkw6jrsyx9vaz"; depends=[plyr reshape2 whisker]; }; R4CouchDB = derive2 { name="R4CouchDB"; version="0.7.5"; sha256="1wd1yqbs8m4zqvdm6x7mrcyk5b5pr4azm3r49nrilg8fnr2bk9rz"; depends=[bitops RCurl RJSONIO]; }; R4dfp = derive2 { name="R4dfp"; version="0.2-4"; sha256="02crzjphlq4hi2crh9lh8l0acmc1rgb3wr1x8sn56cwhq4xzqzcb"; depends=[]; }; R6 = derive2 { name="R6"; version="2.2.2"; sha256="13xfdr19ca7ymisidsanm6w7hsk3qmy5l8c0mlz3nk48f7s5cxq8"; depends=[]; }; @@ -2721,7 +2774,7 @@ in with self; { RAPIDR = derive2 { name="RAPIDR"; version="0.1.1"; sha256="14cnw4jjs5anb55zlg1yj6qc9yr51rsamigq2q7h8ypj2ggnna1d"; depends=[Biostrings data_table GenomicAlignments GenomicRanges PropCIs Rsamtools]; }; RAPTOR = derive2 { name="RAPTOR"; version="1.0.0"; sha256="1i3p3qa56ghcwh69vv3gnxnw13cbd99ms654j2bqr7g9qb7nl8vj"; depends=[mgcv]; }; RATest = derive2 { name="RATest"; version="0.1.2"; sha256="0cxb82kzmywgslf6hfjl6v015s64jh483bzxnhph420mcp3ysbfk"; depends=[ggplot2 gridExtra quantreg]; }; - RAdwords = derive2 { name="RAdwords"; version="0.1.15"; sha256="0f0j5fllkxwa63gpwgaks0sbsq9a68jw6g9djydq4c3jfzw1sqyl"; depends=[RCurl rjson]; }; + RAdwords = derive2 { name="RAdwords"; version="0.1.16"; sha256="1a7r600s7r4pp0wwcsgyzkc6v7nywbsv3s0q118wmx2ig5rsyihw"; depends=[RCurl rjson]; }; RApiDatetime = derive2 { name="RApiDatetime"; version="0.0.3"; sha256="0g5sdq6sl7cvsj9fgqhcdxjkrfi53078r0mbzvf69cvz38y5x3sm"; depends=[]; }; RApiSerialize = derive2 { name="RApiSerialize"; version="0.1.0"; sha256="0gm2j8kh40imhncwwx1sx9kmraaxcxycvgwls53lcyy2ap344k9j"; depends=[]; }; RAppArmor = derive2 { name="RAppArmor"; version="2.0.2"; sha256="18zmqqh4rnbnaiwi60jfp4xi8fp63ydr3jk9w4ijmy6s4hkpp75g"; depends=[]; }; @@ -2746,23 +2799,23 @@ in with self; { RCriteo = derive2 { name="RCriteo"; version="1.0.2"; sha256="1vyhnblw9zr5h6c25lf76p9vn95k8vr0hpq1sjkccdwl9yvsyhfy"; depends=[httr plyr RCurl XML]; }; RCrypto = derive2 { name="RCrypto"; version="0.1.0"; sha256="1lw7hq5ks36fixk0g3gcy4nw21ygwc14jq840hnhyds4glywfpvm"; depends=[dplyr httr jsonlite]; }; RCurl = derive2 { name="RCurl"; version="1.95-4.10"; sha256="02pyh6kvsfbwgccf8v77aa3ky21kps1rpgaii20wmridrgqj90vg"; depends=[bitops]; }; - RCzechia = derive2 { name="RCzechia"; version="1.1.1"; sha256="070k93aj694jyvjmr5rbdzkdmi1sx69fild06dqf8idrkh3i2a55"; depends=[httr]; }; + RCzechia = derive2 { name="RCzechia"; version="1.2.3"; sha256="18x1561l5hnaayvv8mca8gncqfgn4bbqx69gkb0jk3wa6s11y2qk"; depends=[httr]; }; RDIDQ = derive2 { name="RDIDQ"; version="1.0"; sha256="09gincmxv20srh4h82ld1ifwncaibic9b30i56zhy0w35353pxm2"; depends=[]; }; RDML = derive2 { name="RDML"; version="0.9-9"; sha256="0amlr7mxp7175a7rd3jw7lhyvp3lnr01y81l27sl148sfb85zar6"; depends=[checkmate data_table lubridate pipeR R6 readxl rlist stringr xml2]; }; RDS = derive2 { name="RDS"; version="0.8-1"; sha256="18xn0ci35xs2myzj8rny6pp08cn8ljl3l4fdgaqp05fphgb5fh8j"; depends=[anytime ergm ggplot2 gridExtra Hmisc igraph isotone network reshape2 scales]; }; RDSTK = derive2 { name="RDSTK"; version="1.1"; sha256="07vfhsyah8vpvgfxfnmp5py1pxf4vvfzy8jk7zp1x2gl6dz2g7hq"; depends=[plyr RCurl rjson]; }; RDStreeboot = derive2 { name="RDStreeboot"; version="1.0"; sha256="10ry8rna450j389cplvyvgwljxa8lli7licwdin64b1kyzy2cdn7"; depends=[]; }; RDataCanvas = derive2 { name="RDataCanvas"; version="0.1"; sha256="1aw19lmdphxwva5cs3f4fb8hllirzfkk48nqdgrarz32l11y5z5j"; depends=[jsonlite]; }; - RDieHarder = derive2 { name="RDieHarder"; version="0.1.3"; sha256="0wls7b0qfbi6hsq9xdywi4mdhim5b6mrzhvyrm9dxp9z1k7imz6m"; depends=[]; }; + RDieHarder = derive2 { name="RDieHarder"; version="0.1.4"; sha256="0p37r45fy75a0is2mycvhrz705707acdb2858yd9qx70n6sg3jph"; depends=[]; }; RDocumentation = derive2 { name="RDocumentation"; version="0.8.2"; sha256="0qdn3c5xbjyrhk56wfch50xpyyfd4f79hs0v00cqk9iwsnjlwmb5"; depends=[httr proto rjson]; }; RDota2 = derive2 { name="RDota2"; version="0.1.6"; sha256="0fjsgg4dmzw2xwrf8jxq0f2d7f78bf67bl3ms5qcjk9kskfnymag"; depends=[httr jsonlite]; }; - REAT = derive2 { name="REAT"; version="1.3.2"; sha256="1vp103jwq6zf3w6bn3xvbh4zcgsdrwiycp23ab8mj42axk8pw5li"; depends=[]; }; + REAT = derive2 { name="REAT"; version="2.0.0"; sha256="0al0502h1iyd03c4hsy35nxz3nbvvfshi5jxxvxlh1x4bxvpy1vs"; depends=[]; }; REBayes = derive2 { name="REBayes"; version="1.3"; sha256="0byd7587vddffplzp8kc2aakab61pck2r25rajxfn0rsvl5yvxyx"; depends=[Matrix reliaR Rmosek]; }; RECA = derive2 { name="RECA"; version="1.3"; sha256="1v9ff2inxwpq91pjl6g9bpl9nmlyryp030g6abydikkhkcq3n74b"; depends=[]; }; REDCapR = derive2 { name="REDCapR"; version="0.9.8"; sha256="14psw0sxlyig4nf968n997djwf80hgy5ia2g0bp8rdpn8lrj01g6"; depends=[data_table dplyr httr magrittr readr tibble tidyr]; }; REEMtree = derive2 { name="REEMtree"; version="0.90.3"; sha256="01sp36p12ky8vgsz6aik80w4abs70idr9sn4627lf94r92wwwsbc"; depends=[nlme rpart]; }; REGENT = derive2 { name="REGENT"; version="1.0.6"; sha256="1f2sjqkhw3rbmwbcmx7l7imj696kblisi8y3fz77xygbcbxa6rmq"; depends=[]; }; - REIDS = derive2 { name="REIDS"; version="0.0.1"; sha256="1pzbwmbz2agqlj28qpm7msahnk5viih5bqkimq3j8wp2pp580gwz"; depends=[aroma_affymetrix aroma_core data_table lmtest MCMCpack RColorBrewer]; }; + REIDS = derive2 { name="REIDS"; version="0.0.2"; sha256="1njyvc818rwwg109ry8nb2p05rf9yh6zsydvww2ribynlsr2rir1"; depends=[aroma_affymetrix aroma_core biomaRt data_table GenomeGraphs lmtest MCMCpack RColorBrewer]; }; REPPlab = derive2 { name="REPPlab"; version="0.9.4"; sha256="1pf8zrjdzziyq2lw31p1ij7cn4j7pf659ygxv8wpfnmcmpaqbc45"; depends=[lattice LDRTools rJava]; }; REPTILE = derive2 { name="REPTILE"; version="1.0"; sha256="11swy4jrmmb0xjjxm1wyxd628fxxcqnialvijdrjwjpdbvraz4gq"; depends=[doParallel flux foreach optparse randomForest]; }; REQS = derive2 { name="REQS"; version="0.8-12"; sha256="049glqhc8h8gf425kmj92jv70917dsigpm37diby0c6hb4jrg8ka"; depends=[gtools]; }; @@ -2787,7 +2840,7 @@ in with self; { RGCCA = derive2 { name="RGCCA"; version="2.1.2"; sha256="0zcxakqnmih0243y5b6r9nmcfanzxd6q344pd5bca5pnm3y43wr0"; depends=[Deriv MASS]; }; RGENERATE = derive2 { name="RGENERATE"; version="1.3.5"; sha256="12dq04xpl06zhkzwqx3zy0bkpvb5phbdj2inxsyczf6d4dk209mb"; depends=[RMAWGEN]; }; RGENERATEPREC = derive2 { name="RGENERATEPREC"; version="1.2"; sha256="1w28yfzk3ilbz1r9fsc76cigyrnzzhsfm3a81ff8g26za7cb8vjp"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN stringr]; }; - RGF = derive2 { name="RGF"; version="1.0.1"; sha256="1kj67sc10khzl9xxk8ss366hcnmqiad0ap1xsc738ya6bv4xrr5w"; depends=[Matrix R6 reticulate]; }; + RGF = derive2 { name="RGF"; version="1.0.2"; sha256="06qvilx9z659q0kad5h1r6mdf4vc8lmr8bzw5nrjsjpb92v5crh5"; depends=[Matrix R6 reticulate]; }; RGIFT = derive2 { name="RGIFT"; version="0.1-5"; sha256="1745fs4bq0ss39fiwljspvrmnkgbbpc1fjvhvcrsmp2iizq12sgn"; depends=[]; }; RGenetics = derive2 { name="RGenetics"; version="0.1"; sha256="0x5sspd67hh08qm62whlnnd838m0np29q3bfzgwp6j85lhil3jrx"; depends=[]; }; RGeode = derive2 { name="RGeode"; version="0.1.0"; sha256="1g8ha6zg4pvi8qimiihsa6rjfdcyj0q526l44jajjbqczmwg59lv"; depends=[MASS Rcpp]; }; @@ -2795,16 +2848,17 @@ in with self; { RGoogleAnalyticsPremium = derive2 { name="RGoogleAnalyticsPremium"; version="0.1.1"; sha256="0d22pdd5kvnrspikfb66ny07pgx96rvykr0zi78rwn6g1symdb4q"; depends=[httr jsonlite lubridate]; }; RGoogleFit = derive2 { name="RGoogleFit"; version="0.3.1"; sha256="0g4r5vb9zv6mqym1mh028ic9hkmlpklrhq4ks5sys7y60ps893k1"; depends=[bit64 httr jsonlite RCurl]; }; RGraphics = derive2 { name="RGraphics"; version="2.0-14"; sha256="0bv95g17pvpq3nji0akphdaznh9k85hf5z78qypxwfqr76brxd05"; depends=[ggplot2 lattice]; }; + RGreenplum = derive2 { name="RGreenplum"; version="0.1.0"; sha256="19wb85npy27r011yfp90y1dvl8qk2yh2qks8zg207nac0vngz4y1"; depends=[DBI RPostgres]; }; RGtk2 = derive2 { name="RGtk2"; version="2.20.34"; sha256="1yhdcd7f987bdd2y08dcx95i1hbfakgd8v1c606jxwr2dclyhx70"; depends=[]; }; RGtk2Extras = derive2 { name="RGtk2Extras"; version="0.6.1"; sha256="19gjz2bk9dix06wrmlnq02yj1ly8pzhvr0riz9b08vbzlsv9gnk2"; depends=[RGtk2]; }; - RH2 = derive2 { name="RH2"; version="0.2.3"; sha256="1qbxy600fc8k2xl70liggdgg03ga6a8yad001banqzdmh508wcxl"; depends=[chron rJava RJDBC]; }; + RH2 = derive2 { name="RH2"; version="0.2.4"; sha256="14590l3a2znd56nrq1zfbfv7fgii4672qy1xfwiynrh3mjad217k"; depends=[chron rJava RJDBC]; }; RHMS = derive2 { name="RHMS"; version="1.3"; sha256="0pp67p8i6nsh9nvxsd1m453735s0whlril8l640m888zl6a3463j"; depends=[Hmisc pso]; }; RHPCBenchmark = derive2 { name="RHPCBenchmark"; version="0.1.0"; sha256="1f94d8z15ybqgc2pccsi1m6563xf26ygri6f4pwxkqjmxkxnk34y"; depends=[cluster Matrix mvtnorm]; }; RHRV = derive2 { name="RHRV"; version="4.2.3"; sha256="09rcf9da04195myh4mwva3hqcd483k0wwcn84jgbkj8a5z1zxqc6"; depends=[lomb nonlinearTseries tkrplot waveslim]; }; RHT = derive2 { name="RHT"; version="1.0"; sha256="1gxf8nhj3y92h8al7l3fxa45wc568kb3cykrbdjlsy2zjacf7fcc"; depends=[]; }; RHawkes = derive2 { name="RHawkes"; version="0.0"; sha256="0qi32f6im6fsgvjs8bravc5z21557zn2d0a7i88dy0rri7czm5p7"; depends=[IHSEP]; }; RI2by2 = derive2 { name="RI2by2"; version="1.3"; sha256="0smc0fb9anq5ih9zx2slfbqyx02njm0hc7g22gpfggskmxf2l509"; depends=[gtools Rcpp]; }; - RIA = derive2 { name="RIA"; version="1.3.0"; sha256="0wz2c770faravsmlp3ivbw136x82l1i14ilikrdn7cn49bz0r5mh"; depends=[oro_dicom]; }; + RIA = derive2 { name="RIA"; version="1.4.0"; sha256="0whwja54mmd23sbljgvjnlgz3hlmgpdh53w04bcpgbmvcs281f5l"; depends=[nat oro_dicom oro_nifti]; }; RIFS = derive2 { name="RIFS"; version="0.1-5"; sha256="0705dhirh7bhy2yf3b1mpk3m7lggg4pwy640lvaspwaxkd6zac5w"; depends=[]; }; RISmed = derive2 { name="RISmed"; version="2.1.7"; sha256="08dmkkxsmwp9b4h2g1bbx03cijn793fsnzkmbima8x9d42vxnm1l"; depends=[]; }; RImageJROI = derive2 { name="RImageJROI"; version="0.1.1"; sha256="0a4sa60klbpl31qxxvjjbksdhvs3vwm9na1v7014v93fzxy6bjas"; depends=[spatstat]; }; @@ -2812,7 +2866,7 @@ in with self; { RInSp = derive2 { name="RInSp"; version="1.2.3"; sha256="1nm29q2gysway4r7rdjr08m0w8lh2m9akhjh7swgjwrg4f15kfmy"; depends=[]; }; RInside = derive2 { name="RInside"; version="0.2.14"; sha256="1ks9hs78s2vgdp9nfpzwifkqnh3vnaqwand51yh9r1zyjc4k9rcd"; depends=[Rcpp]; }; RItools = derive2 { name="RItools"; version="0.1-15"; sha256="0f7g0w8bnbxryll48rnn7blgskgcdqqx9xv4fqmwcbkbasjz37va"; depends=[abind SparseM survival svd xtable]; }; - RJDBC = derive2 { name="RJDBC"; version="0.2-7"; sha256="0db2s3qkkv16a4xskym8q3lv5s5jscwd5hh1pgl9bndb91wm9qj7"; depends=[DBI rJava]; }; + RJDBC = derive2 { name="RJDBC"; version="0.2-7.1"; sha256="1d36js3kwlghsjxfhv7rl8nvg210hxwrx8sdxrxb0inwlqsash25"; depends=[DBI rJava]; }; RJSDMX = derive2 { name="RJSDMX"; version="1.9-3"; sha256="0myjhimx1p8ndyk60qgaw6csq58s4rxr67hgx9a5i1swsmlkwciz"; depends=[rJava zoo]; }; RJSONIO = derive2 { name="RJSONIO"; version="1.3-0"; sha256="1dwgyiy19sixhy6yclqcaaxswbmpq7digyjjxhy1qv0wfsvk94qi"; depends=[]; }; RJSplot = derive2 { name="RJSplot"; version="2.5"; sha256="0p2zqbq29pfjl703wqqjzgmif7yfzz7l8rzarjf5axkdy7w7fcyl"; depends=[]; }; @@ -2820,9 +2874,6 @@ in with self; { RJafroc = derive2 { name="RJafroc"; version="1.0.1"; sha256="16a8j4bw754ci8mxfhh3c3y5g53f2hr1l1mh05xw31asqcxzafrm"; depends=[bbmle binom caTools ggplot2 mvtnorm numDeriv Rcpp stringr xlsx]; }; RKEA = derive2 { name="RKEA"; version="0.0-6"; sha256="1dncplg83b4zznh1zh90wr8jv5259cy93imrry86c5kqdijmhrrp"; depends=[rJava RKEAjars tm]; }; RKEAjars = derive2 { name="RKEAjars"; version="5.0-3"; sha256="0sm7dkdprmqh319jc43ra7qbk4qq0b2kdj9zs9mjcjz58gcrkl7s"; depends=[rJava]; }; - RKEEL = derive2 { name="RKEEL"; version="1.1.22"; sha256="1k0xdy23za38lmav7hh9zchy9x61nkdm34s3cqrclzhf4nnlndfi"; depends=[arules doParallel foreach gdata Matrix pmml R6 rJava RKEELdata RKEELjars XML]; }; - RKEELdata = derive2 { name="RKEELdata"; version="1.0.3"; sha256="1imz5qsr04hkhblivax30jlvbvjxya6h0z9x7s0llgqssfxbawpy"; depends=[]; }; - RKEELjars = derive2 { name="RKEELjars"; version="1.0.15"; sha256="06wc4x6lhk9akaghqi5bfkfs3yxg29lbga074a5nwadiz2fbnmkv"; depends=[downloader]; }; RKlout = derive2 { name="RKlout"; version="1.0"; sha256="17mx099393b1m9dl3l5xjcpzmb9n3cpjghb90m9nidccxkhacmqf"; depends=[RCurl]; }; RLRsim = derive2 { name="RLRsim"; version="3.1-3"; sha256="1r0xqay3jfg435dh9fqc6yy73wjffp658da194rx63vpfhshgz8w"; depends=[lme4 mgcv nlme Rcpp]; }; RLT = derive2 { name="RLT"; version="3.2.1"; sha256="14im1lvsfpl1vlhc3fmmi4vq41br48mlgqqnwnj0qqxawzzs5738"; depends=[]; }; @@ -2832,8 +2883,10 @@ in with self; { RLumShiny = derive2 { name="RLumShiny"; version="0.2.0"; sha256="0gchhgpdr9fb29apqni9yg72rh3hvvk7ap0869fp459hnygfcl7q"; depends=[data_table googleVis Luminescence readxl rhandsontable shiny shinydashboard]; }; RM_weights = derive2 { name="RM.weights"; version="1.0"; sha256="0757p4174j913k8xh90zg6fpxh25b9415zap1i7ym9ab78kn0k3i"; depends=[Hmisc psychotools]; }; RM2 = derive2 { name="RM2"; version="0.0"; sha256="1v57nhwg8jrpv4zi22fhrphw0p0haynq13pg9k992sb0c72dx70a"; depends=[msm]; }; + RM2006 = derive2 { name="RM2006"; version="0.1.0"; sha256="1qjvdh89jql1fl6ia76g766y1igkshlv0slqmpi0y3bn40413snb"; depends=[]; }; RMAWGEN = derive2 { name="RMAWGEN"; version="1.3.3"; sha256="0spc0vszbxfpfp3kqdj0gnb90nvn50qwalq3mw8151b8h1swmf3l"; depends=[chron date vars]; }; RMC = derive2 { name="RMC"; version="0.2"; sha256="1sc4nsjmaw2ajm8bka7r4mf73zxqhnvx23kl4v20pfpy9rhgd0h6"; depends=[]; }; + RMCriteria = derive2 { name="RMCriteria"; version="0.1.0"; sha256="19i7idpkl7ipqcib6rlmbi77n1il9v2hy6s9yyia6m9sz1smxakl"; depends=[dplyr ggnetwork ggplot2 gridExtra linprog lpSolve network pastecs Rcpp RcppEigen RcppNumerical]; }; RMKdiscrete = derive2 { name="RMKdiscrete"; version="0.1"; sha256="0b4adw46sn98qmy4nxv5l5svcjrp5532x7slfhhgsskqx408lzjf"; depends=[]; }; RMOA = derive2 { name="RMOA"; version="1.0"; sha256="01mrl6544wv2jc8b8gk1whs865sbv4id5sywnf1hq3r7g8wgs8lp"; depends=[rJava RMOAjars]; }; RMOAjars = derive2 { name="RMOAjars"; version="1.0"; sha256="0k3w37dwyyvfxh7a9l76cyjm27qq1clxppc5h16li2m8x68fvpjq"; depends=[rJava]; }; @@ -2841,21 +2894,22 @@ in with self; { RMThreshold = derive2 { name="RMThreshold"; version="1.1"; sha256="0wkc42vcggib002ad6ch43h6avpdgl12szrrrfd2p0wl72cwn5n1"; depends=[Matrix png]; }; RMTstat = derive2 { name="RMTstat"; version="0.3"; sha256="1nn25q4kmh9kj975sxkrpa97vh5irqrlqhwsfinbck6h6ia4rsw1"; depends=[]; }; RMallow = derive2 { name="RMallow"; version="1.0"; sha256="0prd5fc98mlxnwjhscmghw62jhq9rj5jk8qf4fnaa2a718yxf9b5"; depends=[combinat]; }; - RMariaDB = derive2 { name="RMariaDB"; version="1.0-4"; sha256="0xzy1af1w0cjym48zlgdsngksp8j90b0197v78s5jkm1vxmr0ada"; depends=[BH bit64 DBI hms plogr Rcpp]; }; + RMariaDB = derive2 { name="RMariaDB"; version="1.0.5"; sha256="1fykcsb81pdp3v46sjphldj7nizcdp5m7a3j3p1psx0ppgg57r2d"; depends=[BH bit64 DBI hms plogr Rcpp]; }; RMark = derive2 { name="RMark"; version="2.2.4"; sha256="1vns8bl3fnk6hkwmm0wl2c6lgyv3vabsk07kkxrxrl1nzy11wj3a"; depends=[coda matrixcalc msm]; }; RMediation = derive2 { name="RMediation"; version="1.1.4"; sha256="19idqx0hwljbcfrpqwa81k7cxbd8kv77ji8yi4n4p7517jbkzma6"; depends=[e1071 lavaan MASS]; }; RMixpanel = derive2 { name="RMixpanel"; version="0.6-3"; sha256="025fg36jwq44y5m7msmjql3m0avc0hl0iw49wap0fvmzy5qn24qq"; depends=[base64enc jsonlite RCurl uuid]; }; RMongo = derive2 { name="RMongo"; version="0.0.25"; sha256="1anybw64bcipwsjc880ywzj0mxkgcj6q0aszdad6zd4zlbm444pc"; depends=[rJava]; }; RMySQL = derive2 { name="RMySQL"; version="0.10.14"; sha256="01891kn263b02y6addgpy3gn5axg7m10bqbqv7dg9yx9k85am590"; depends=[DBI]; }; RNAseqNet = derive2 { name="RNAseqNet"; version="0.1.2"; sha256="07wk0i8iz3cvkiqawxhm61g3nka8adw0zrrv60zx329gg49w0ycl"; depends=[ggplot2 glmnet hot_deck igraph PoiClaClu]; }; - RNAsmc = derive2 { name="RNAsmc"; version="0.1.0"; sha256="02r8y43hrhjyhmim2yf7s4c46q8ys6b8qla9vwjqpmx5104v5v5g"; depends=[RRNA]; }; + RNAsmc = derive2 { name="RNAsmc"; version="0.3.0"; sha256="15k88skwqcd0m4m502fipdl1iind4mzizqdz4h63izpqfxijl3iz"; depends=[RRNA]; }; RNAstructureModuleMiner = derive2 { name="RNAstructureModuleMiner"; version="0.1.0"; sha256="026r1h4z1jdfww0ay9iixa77ax6b19pgp589bbn77xg1vwjjlbsk"; depends=[RRNA]; }; RNCBIEUtilsLibs = derive2 { name="RNCBIEUtilsLibs"; version="0.9"; sha256="1h1ywx8wxy6n2rbpmjbqw4c0djz29pbncisd0mlbshj1fw226jba"; depends=[rJava]; }; RNCEP = derive2 { name="RNCEP"; version="1.0.8"; sha256="0nkx33997c5rgc3ch5a2bb6rrw5xw1y71rliygw5k1ldi335rsm7"; depends=[abind fields fossil maps RColorBrewer sp tgp]; }; RND = derive2 { name="RND"; version="1.2"; sha256="1rl5apgw43c841z0lapi9z2jn979dvqh4x1qkqx1ad77zcq87c85"; depends=[]; }; + RNGforGPD = derive2 { name="RNGforGPD"; version="1.0"; sha256="11n7fl1rrgnknn61qw6dh74amhakkjk5wyg0rms554lw9cn86x2v"; depends=[corpcor Matrix mvtnorm VGAM]; }; RNHANES = derive2 { name="RNHANES"; version="1.1.0"; sha256="045ykpgxvc22blbp47ysbk6a6x4akjd39pjr114cr23s7f48g6h4"; depends=[dplyr foreign rvest survey xml2]; }; - RNOmni = derive2 { name="RNOmni"; version="0.1.5"; sha256="1lahwala3j0rcxdq1aswngqp89d4za167nrmsbj1lqscd7bn6qkd"; depends=[abind foreach mvtnorm RcppEigen]; }; - RNRCS = derive2 { name="RNRCS"; version="0.2.0"; sha256="1wg7ld6g94wby5lagf68h19qgx2mf0pc8rfvmnz4fac7xpdsg9s8"; depends=[ggplot2 magrittr rvest xml2]; }; + RNOmni = derive2 { name="RNOmni"; version="0.3.0"; sha256="0gddpfv0ggbfxids42npnd0q2bkwz81v3x7h1898qyzql3dg9pwv"; depends=[abind foreach mvtnorm plyr Rcpp RcppEigen]; }; + RNRCS = derive2 { name="RNRCS"; version="0.2.5"; sha256="19q78l8mh4701vqvr36vqc87n39s5ivzhiy5lvnxbd4dgibk1jr2"; depends=[ggplot2 magrittr rvest xml2]; }; RNaviCell = derive2 { name="RNaviCell"; version="0.2"; sha256="15k8hkagn5520fy7x672fy329s2v7l0x44s44f6v7ql9mmg4b635"; depends=[RCurl RJSONIO]; }; RNeXML = derive2 { name="RNeXML"; version="2.0.8"; sha256="0ikdv60nkhiv70x1crd21xd92iq2gshj6248m896v1l276513g5j"; depends=[ape dplyr httr lazyeval plyr reshape2 stringr taxize tidyr uuid XML]; }; RNentropy = derive2 { name="RNentropy"; version="1.2.0"; sha256="19zbjy2xrrsz674qhi6dfzppsgfdy9hp93bqj14p1w3z6smh0k8c"; depends=[]; }; @@ -2895,7 +2949,7 @@ in with self; { ROMIplot = derive2 { name="ROMIplot"; version="1.0"; sha256="1njbsvnz7wrsv9l1p70p1ygmckaibz5i6jmvb0sfalp5jdcgl85n"; depends=[MortalitySmooth RCurl]; }; ROSE = derive2 { name="ROSE"; version="0.0-3"; sha256="12b9grh3rgaa07blbnxy8nvy5gvpd45m43bfqb3m4k3d0655jpk2"; depends=[]; }; RObsDat = derive2 { name="RObsDat"; version="16.03"; sha256="06d4svg4crgscn3wyg1fi8v46wlhlrgdrbfiv8ak4a5k5z0gws94"; depends=[DBI e1071 sp spacetime vwr xts zoo]; }; - ROlogit = derive2 { name="ROlogit"; version="0.1.1"; sha256="1bmhq3vcrfxl7flr28x5yhk8akfv59c0xs10s73dchf1qqjfz5ld"; depends=[evd survival]; }; + ROlogit = derive2 { name="ROlogit"; version="0.1.2"; sha256="09j9c24f7plzpnnhpmzdi4gapb7w1377ksjwk6i2xpyr4bfsrr5k"; depends=[evd survival]; }; ROpenDota = derive2 { name="ROpenDota"; version="0.1.1"; sha256="0d9a8c008bgzcd1hqly2h010f25xgs2s430hk90yq7vvqr3lmxl7"; depends=[jsonlite RCurl]; }; ROpenFIGI = derive2 { name="ROpenFIGI"; version="0.2.8"; sha256="0fvd25vsqkgi3jv4s2lnfag5qksyzyb48d7rhfw6z8piz37n4xaj"; depends=[httr jsonlite]; }; ROpenWeatherMap = derive2 { name="ROpenWeatherMap"; version="1.1"; sha256="0h1yw93v06bx8svhghh1fsrf837qax9896klh64b06djpgg9ngb9"; depends=[httr jsonlite RCurl]; }; @@ -2914,13 +2968,13 @@ in with self; { RPPairwiseDesign = derive2 { name="RPPairwiseDesign"; version="1.0"; sha256="0k2vh698rhs5a0b5vhyvrnnwqnagdzs591zx6hn9vbmm8rm4y1dm"; depends=[]; }; RPPanalyzer = derive2 { name="RPPanalyzer"; version="1.4.5"; sha256="0cf4mb7mjp7x3k7083c8n8fjbvrmcgq359wh6pdyj817mgkanqzv"; depends=[Biobase gam ggplot2 gplots Hmisc lattice limma quantreg]; }; RPostgreSQL = derive2 { name="RPostgreSQL"; version="0.6-2"; sha256="1mdhw5821v2h7hpa53v10wz53k4i90r0vb6a3dia5gq8f9j1h088"; depends=[DBI]; }; - RPostgres = derive2 { name="RPostgres"; version="1.0-4"; sha256="0ymlz5av86xy434mr319p2sw7gl42dpj5vfi83wfiq1qri2vvx23"; depends=[BH bit64 blob DBI hms plogr Rcpp withr]; }; + RPostgres = derive2 { name="RPostgres"; version="1.1.0"; sha256="1h540z1zfzgkayggy28q07r0xnblr3vnp6j5j7la6xbz141gns38"; depends=[BH bit64 blob DBI hms plogr Rcpp withr]; }; RPresto = derive2 { name="RPresto"; version="1.3.0"; sha256="01w832ia4c44nhir5rzw33qa8h7afmf04vkfdlg32jaqi1gv5861"; depends=[DBI httr jsonlite openssl Rcpp stringi]; }; RProtoBuf = derive2 { name="RProtoBuf"; version="0.4.11"; sha256="0q05hdlbgbjydi0x80kgfayfkisalvmb9wy1n6afcw66pbikyb4l"; depends=[Rcpp RCurl]; }; RPtests = derive2 { name="RPtests"; version="0.1.4"; sha256="1r30pslbjq3dip41la81jlin2vhxdmayg902x9ryjy554awfgh7j"; depends=[glmnet randomForest Rcpp]; }; RPublica = derive2 { name="RPublica"; version="0.1.3"; sha256="1w2pn1g44a00ls8kkzj53a739pq6vzp38px2k0yh10rlzimmb21l"; depends=[curl httr jsonlite]; }; RPushbullet = derive2 { name="RPushbullet"; version="0.3.1"; sha256="15cb1zlfnjaf5z4dqx3xrkbkja152ah7jhs21qhvfl20qz4cyh7r"; depends=[curl jsonlite]; }; - RQDA = derive2 { name="RQDA"; version="0.3-0"; sha256="0p060wilvmz5wyahbga6gxkhs49rw8nb093bfrha7vhqhxnmdyqk"; depends=[DBI gWidgets gWidgetsRGtk2 igraph RGtk2 RSQLite]; }; + RQDA = derive2 { name="RQDA"; version="0.3-1"; sha256="1kqax4m4n5h52gi0jaq5cvdh1dgl0bvn420dbws9h5vrabbw1c1w"; depends=[DBI gWidgets gWidgetsRGtk2 igraph RGtk2 RSQLite]; }; RQGIS = derive2 { name="RQGIS"; version="1.0.3"; sha256="0wrzjfxwciirl838lakcw7f6qyqyykqd999c9krll5krqzyq7c3c"; depends=[raster RCurl readr reticulate rgdal sf sp stringr XML]; }; RQuantLib = derive2 { name="RQuantLib"; version="0.4.4"; sha256="1pki0c265nmgph9dbz2pyrq8h7295mxswavfdwsr7m1lpbpzk8s5"; depends=[Rcpp zoo]; }; RRF = derive2 { name="RRF"; version="1.7"; sha256="1nxwqb0ybia8cglqlrbwnm9xzab6ayrn5f3j3l0kqszq1rvkfw95"; depends=[]; }; @@ -2929,12 +2983,14 @@ in with self; { RRTCS = derive2 { name="RRTCS"; version="0.0.3"; sha256="1riz1gjx3c0pf17xwybizb94nm5zgmfsnv6np3afvw831mb1x3l9"; depends=[sampling samplingVarEst]; }; RRate = derive2 { name="RRate"; version="1.0"; sha256="1q3f2gphdf50aijnk5xqfpxcqfd4jq7byb1gpb0vcnaxgi3a9lwm"; depends=[]; }; RRedshiftSQL = derive2 { name="RRedshiftSQL"; version="0.1.2"; sha256="03jbml8d19hcg6achnyc4hcnl5j10yvsx59j80r46zyn0flsnizq"; depends=[DBI RPostgreSQL]; }; - RRreg = derive2 { name="RRreg"; version="0.6.5"; sha256="1hn69zqcafiq1fb38fl4gah90kim8pc2m35sbi1cgkgcbzz1vg16"; depends=[doParallel foreach lme4]; }; + RRphylo = derive2 { name="RRphylo"; version="1.0.0"; sha256="1h167w16lky8aa18fc90rgclx1by3qa9d69n72dxmjzy0d14zjc6"; depends=[ape doParallel foreach geiger lmtest mvMORPH phangorn phytools pvclust R_utils rlist scales smatr]; }; + RRreg = derive2 { name="RRreg"; version="0.6.7"; sha256="0v0rzyknqwrnj3dx5lvifzllv1syzflnnby6mjmnsqqb2cgyscrf"; depends=[doParallel foreach lme4]; }; RSA = derive2 { name="RSA"; version="0.9.11"; sha256="1hsjy755r78my6ib9s9da7mibcjxd5svh2kq0v7a466m60cyfrss"; depends=[aplpack ggplot2 lattice lavaan plyr RColorBrewer tkrplot]; }; RSADBE = derive2 { name="RSADBE"; version="1.0"; sha256="1nzpm88rrzavk0n8iflsx8r3s1xcry15n80zqdw6jijjycz10w1q"; depends=[]; }; RSAGA = derive2 { name="RSAGA"; version="1.0.0"; sha256="1023br8q0i6w18kmn261kf4ql32061hq7xngl1w5mamvvp17d6b1"; depends=[gstat plyr rgdal sf shapefiles]; }; RSAP = derive2 { name="RSAP"; version="0.9"; sha256="1sxirfabhpmfm0yiiazc9h1db70hqwva2is1dql6sjfanpl8qanl"; depends=[reshape yaml]; }; - RSCABS = derive2 { name="RSCABS"; version="0.9.2"; sha256="13l4ql40ahm06yi5a9zys62h5452fchkkhlhqh9gzh3pbpyjawgc"; depends=[gWidgets gWidgetsRGtk2 R2HTML RGtk2]; }; + RSAlgaeR = derive2 { name="RSAlgaeR"; version="1.0.0"; sha256="1hp0v2vkj9ixiv541d53kyl0ph3jsdc5w98r81gv5ck5ixrp6bxp"; depends=[cvTools ggplot2 hydroGOF lubridate mblm plyr]; }; + RSCABS = derive2 { name="RSCABS"; version="0.9.3"; sha256="08ykkqx9rdx5s6wg2idxz35ddpsz1lir22vrjs92k51zq0jrkhv9"; depends=[gWidgets gWidgetsRGtk2 R2HTML RGtk2]; }; RSDA = derive2 { name="RSDA"; version="2.0.3"; sha256="18rka6g93yksgnwgzy4planjvsmc4d5xzf4fxarv57v6frg37y98"; depends=[abind dplyr FactoMineR ggplot2 glmnet lazyeval nloptr pander princurve RColorBrewer RJSONIO rlang scales scatterplot3d sqldf stringr tidyr XML xtable]; }; RSEIS = derive2 { name="RSEIS"; version="3.7-8"; sha256="0f065jkdz91gi6l8y5y4m95vwgjsagrxx6r5982jbafi7zyqxm7j"; depends=[RPMG Rwave]; }; RSGHB = derive2 { name="RSGHB"; version="1.1.2"; sha256="0b2v17p3a3sy8jc4vy0nq65sdkxyf0b8sf5f78yvdcn5knydah6c"; depends=[]; }; @@ -2944,10 +3000,10 @@ in with self; { RSNNS = derive2 { name="RSNNS"; version="0.4-10"; sha256="1khsv1sy8jgsl9s5fypcg77lzj811xzrygwnq6ki9v375sk383gh"; depends=[Rcpp]; }; RSNPset = derive2 { name="RSNPset"; version="0.5.3"; sha256="1llx6anwkl4as0hdyvmsrlg9z8mkn9p1qxgs6kqs39w87gyx0j36"; depends=[doRNG fastmatch foreach qvalue Rcpp RcppEigen]; }; RSPS = derive2 { name="RSPS"; version="1.0"; sha256="0ynxhgnxsf27qm8r5d9lyd59zksnc3kvx35hy25vff8j3bg7fqgi"; depends=[gridExtra lattice plyr]; }; - RSQLServer = derive2 { name="RSQLServer"; version="0.3.0"; sha256="1p3qds1ni8dm7cb45n4z5ppn3vsjk8mmqlvw76d301qfp3ja5zll"; depends=[assertthat DBI dbplyr dplyr purrr rJava yaml]; }; - RSQLite = derive2 { name="RSQLite"; version="2.0"; sha256="1xpg1i1jkzkzv44k512k90c2vvl960pl2d4a3spwcha6yclyc3vz"; depends=[BH bit64 blob DBI memoise pkgconfig plogr Rcpp]; }; + RSQLite = derive2 { name="RSQLite"; version="2.1.0"; sha256="0hknfqcgijdapx1ryy20zy68qmm8wsb1hjx4n4hmkgl552z82q5d"; depends=[BH bit64 blob DBI memoise pkgconfig plogr Rcpp]; }; RSSL = derive2 { name="RSSL"; version="0.6.1"; sha256="03f0i0v0nygkcci42h4bh7jngxz15wsd78cn2zkzbrqadz1c61r5"; depends=[cluster dplyr ggplot2 kernlab MASS Matrix quadprog Rcpp RcppArmadillo reshape2 scales tidyr]; }; RSSOP = derive2 { name="RSSOP"; version="1.1"; sha256="119xrxpaf68qdb2kj2pbaja6im2nbxsgibb1bnlpnc3fcxkmqcsf"; depends=[]; }; + RSSampling = derive2 { name="RSSampling"; version="1.0"; sha256="0p10l7qmksx4ysz1jb84f9nbqzig8wxhwy33yk8hq29nb5i4c9ik"; depends=[LearnBayes]; }; RSVGTipsDevice = derive2 { name="RSVGTipsDevice"; version="1.0-7"; sha256="0jdr8l0hp4kzsvlgs8j1m74sr98z4v2lmiqinmc238m406nhppab"; depends=[]; }; RSarules = derive2 { name="RSarules"; version="1.0"; sha256="0lrql4q45hyhqbix86ixl12mknnjbz3137gx2zkvqpz91bsk145j"; depends=[arules Matrix]; }; RSauceLabs = derive2 { name="RSauceLabs"; version="0.1.6"; sha256="1p7hw6vnlg6w5ggmfpc3q3s6n1fikjkjnxzz97jifiy0zwn5dp9i"; depends=[data_table httr jsonlite whisker xml2]; }; @@ -2962,11 +3018,11 @@ in with self; { RSpectra = derive2 { name="RSpectra"; version="0.12-0"; sha256="0aa33mhzj03gznpza5l5qj94s45imfhrgx52bsa8rq00f93fgaf0"; depends=[Matrix Rcpp RcppEigen]; }; RSpincalc = derive2 { name="RSpincalc"; version="1.0.2"; sha256="09fjwfz1bzpbca1bpzxj18ki8wh9mrr5h6k75sc97cyhlixqd37s"; depends=[]; }; RStata = derive2 { name="RStata"; version="1.1.1"; sha256="1wx6cz4567xkfplybmbwmw25snhlaxn48yi620cv6p5xqv458yp7"; depends=[foreign]; }; - RStoolbox = derive2 { name="RStoolbox"; version="0.1.10"; sha256="0qz9k7qjwhgw2hm4b6iys365y8dnd9b9js2yzyxpyqwdwmvmkxjj"; depends=[caret codetools doParallel foreach geosphere ggplot2 raster Rcpp RcppArmadillo reshape2 rgdal rgeos sp XML]; }; + RStoolbox = derive2 { name="RStoolbox"; version="0.2.1"; sha256="1lvjiaamd2jz1m1prk429lwfwqbm3dcyq6v8hddkynd0k28qbw6s"; depends=[caret codetools doParallel foreach geosphere ggplot2 raster Rcpp RcppArmadillo reshape2 rgdal rgeos sp XML]; }; RStorm = derive2 { name="RStorm"; version="0.902"; sha256="1apk358jwzg5hkrcq8h39rax1prgz9bhkz9z51glmci88qrw1frv"; depends=[plyr]; }; RStripe = derive2 { name="RStripe"; version="0.1"; sha256="0vp7zsd5xm8rf7196fivb76kkmxfx3gawxlyjhn9xqv92vawivra"; depends=[httr jsonlite RCurl]; }; RSurveillance = derive2 { name="RSurveillance"; version="0.2.0"; sha256="1lvl9msnd8l9svd9nyivx1cqfmcxirxvfjfj0xv7yjklza8af7w3"; depends=[epiR epitools mc2d]; }; - RSurvey = derive2 { name="RSurvey"; version="0.9.2"; sha256="0mg0g93bli2v5nsm3jqbbm3qxk1kk0ngf8fkdq4z9n8k291shx25"; depends=[colorspace inlmisc MBA raster rgdal rgeos sp]; }; + RSurvey = derive2 { name="RSurvey"; version="0.9.3"; sha256="0yk969jdvpgv01zbmk4zyxcmrbdizh37bddj1k128ndyf191z37x"; depends=[colorspace inlmisc MBA raster rgdal rgeos sp]; }; RSvgDevice = derive2 { name="RSvgDevice"; version="0.6.4.4"; sha256="0vplac5jzg6bmvbpmj4nhiiimsr9jlbk8mzyifnnndk9iyf2lcmz"; depends=[]; }; RSwissMaps = derive2 { name="RSwissMaps"; version="0.1.0"; sha256="0p57pb3p6j0g4ngzikys9i4d02p4dc4k0s8k7r1wgdmdy2rak3k2"; depends=[downloader dplyr ggplot2]; }; RTConnect = derive2 { name="RTConnect"; version="0.1.4"; sha256="1000jmmqzyhl6vh1ii75jdh88s9inaz52gvfwcin2k2zr7bi91ba"; depends=[]; }; @@ -2991,14 +3047,14 @@ in with self; { RWeka = derive2 { name="RWeka"; version="0.4-37"; sha256="1q0riy7w2ighyy7fh1hj3q4wa0vbbn6h7nisgkyzwkcxkfq3n2pw"; depends=[rJava RWekajars]; }; RWekajars = derive2 { name="RWekajars"; version="3.9.2-1"; sha256="006n7m3qxnzvfhkzcr0nbwqdlhygzdhyp8x3534dx6075bm00v0f"; depends=[rJava]; }; RWiener = derive2 { name="RWiener"; version="1.3-1"; sha256="0w12xvc18l002m8q6ad3laa667xzqjbcfqf0vvcmicgw2j3bbq6h"; depends=[]; }; - RWildbook = derive2 { name="RWildbook"; version="0.9.2"; sha256="1bzdj55v7g2vlffpdsxpl8gv4k1xxd3xl7h1whvq6q5x76lprw0g"; depends=[data_table jsonlite marked]; }; + RWildbook = derive2 { name="RWildbook"; version="0.9.3"; sha256="1pznzmv8n33hhj61h07fha1gzafcx705n8323cnz3mx6ziijfh28"; depends=[data_table jsonlite marked]; }; RXKCD = derive2 { name="RXKCD"; version="1.8-2"; sha256="081zrx293z4009p6fj2za0mkf04nikxmg3i45l667qvy7nmajqlc"; depends=[jpeg png RJSONIO]; }; RXMCDA = derive2 { name="RXMCDA"; version="1.5.5"; sha256="1ci73q8xf3xxqw8b7sk83v5vz2cqgcb4lkx7qi3hd1ff4xkz1fpa"; depends=[kappalab XML]; }; - RXshrink = derive2 { name="RXshrink"; version="1.0-8"; sha256="0l4aknr1vxrkxqsgkjcffs0731jskyzvl055a01vd8h4a0826n5s"; depends=[lars]; }; + RXshrink = derive2 { name="RXshrink"; version="1.0-9"; sha256="0lzh2asgxk7vjvb8zkshnhh49ybvj1rgca1mspg7hj3012rw6kjn"; depends=[lars]; }; RYandexTranslate = derive2 { name="RYandexTranslate"; version="1.0"; sha256="0qrv5mnnkn5fs7vx6i74z46s0qj9f98km5bizgj00832qyrq8q1s"; depends=[httr jsonlite RCurl]; }; RYoudaoTranslate = derive2 { name="RYoudaoTranslate"; version="1.0"; sha256="1i3iyqh97vpn02bm66kkmw52ni29js30v18n2aw8pvr88jpdgxm4"; depends=[RCurl rjson]; }; RZabbix = derive2 { name="RZabbix"; version="0.1.0"; sha256="0c5803chpzvp7dk9pjfx5f0nqynb76ywakz04ah2nw07ypvcyjyr"; depends=[httr jsonlite]; }; - RZigZag = derive2 { name="RZigZag"; version="0.1.4"; sha256="1p0p9imdv40vw59m95x00zv9a3knl4m4gwlrbd2v93yzdc1n2a26"; depends=[Rcpp RcppEigen]; }; + RZigZag = derive2 { name="RZigZag"; version="0.1.5"; sha256="0cawn24z0rm78dn8l86k3zfh4z3xp1i910dzxp7xqjzlh3spp4ar"; depends=[Rcpp RcppEigen]; }; RaPKod = derive2 { name="RaPKod"; version="0.9"; sha256="1qxzi2lf431zd44bcd98ybhzydy1cz12g864l6r668jk91aqy1qg"; depends=[kernlab MASS proxy Rcpp RcppArmadillo]; }; RadOnc = derive2 { name="RadOnc"; version="1.1.4"; sha256="1ri6ybzhfdgbrbfcy12mmvv2ipg61az7vwp1dbjyzs8mgsc1cxb5"; depends=[geometry oro_dicom ptinpoly rgl]; }; RadTran = derive2 { name="RadTran"; version="1.0"; sha256="1sb8d4y3b37akbxhdavxrkp34zn3ip061b7gzy0ga57pyn76cvpn"; depends=[ReacTran rootSolve]; }; @@ -3011,7 +3067,7 @@ in with self; { RandVar = derive2 { name="RandVar"; version="1.0.1"; sha256="0vj0p46xmj4129m6r5zg85fnvb5kx1ardwwk55nqypkxd0v58a4j"; depends=[distr distrEx startupmsg]; }; RandomFields = derive2 { name="RandomFields"; version="3.1.50"; sha256="0j7852wvclglp820y2x5r19gsr6ciygbbpl5qvwj1khnlz1hfsid"; depends=[RandomFieldsUtils sp]; }; RandomFieldsUtils = derive2 { name="RandomFieldsUtils"; version="0.3.25"; sha256="0nxk7jhr61l9h76hf96f7ypakl4wip144c0gzr6rqsja6m75rjz3"; depends=[]; }; - RankAggreg = derive2 { name="RankAggreg"; version="0.6.2"; sha256="1hblxvx5symysqfrmapw8ma7ghhmc01rzzc7kpq8vckch2k9x8kb"; depends=[gtools]; }; + RankAggreg = derive2 { name="RankAggreg"; version="0.6.4"; sha256="1bskq723jx87xczw416pijajna73zhjjmbrvh3n6djxy8yjxhrq5"; depends=[gtools]; }; RankResponse = derive2 { name="RankResponse"; version="3.1.1"; sha256="04s588zbxcjgvpmbb2x46bbf5l15xm7pwiaxjgc1kn1pn6g1080c"; depends=[]; }; Rankcluster = derive2 { name="Rankcluster"; version="0.94"; sha256="0ak6cpm073ym4h9l3j7pq0ks9h4is1hzxfjn52j23nc5ifq3fjpq"; depends=[Rcpp RcppEigen]; }; RankingProject = derive2 { name="RankingProject"; version="0.1.1"; sha256="1n1282pym7q2b1bh18wlkmk9f0simzq149h7hacc23vyqzgkjs84"; depends=[]; }; @@ -3019,7 +3075,7 @@ in with self; { Rarity = derive2 { name="Rarity"; version="1.3-6"; sha256="1m742qrgc0c5vda9sb2q5n3ghmqnlnfhr1cfpxfs7s5ic707gmlb"; depends=[]; }; RaschSampler = derive2 { name="RaschSampler"; version="0.8-8"; sha256="0y7dkgv1cy6r1mbmyqm27qwl10rl12g1svpx9jkzq5hq0hnm2xhw"; depends=[]; }; RateDistortion = derive2 { name="RateDistortion"; version="1.01"; sha256="1micjlbir1v5ar51g1x7bgkqw9m8217qi82ii6ysgjkhwdvpm075"; depends=[]; }; - RatingScaleReduction = derive2 { name="RatingScaleReduction"; version="1.2"; sha256="0bw2j2wx0l56wp0k6fg8dddphggz0fycjzjydsd55rkg4zq6gpf3"; depends=[ggplot2 pROC]; }; + RatingScaleReduction = derive2 { name="RatingScaleReduction"; version="1.2.1"; sha256="0dcyajh3vgdl9ssdwgaf3sshq61bqqhjz30f9c99aqnpv3k4k76x"; depends=[ggplot2 pROC]; }; Rbent = derive2 { name="Rbent"; version="0.1.0"; sha256="0xkb57dhhfd3342rv0xwbhbhn4zp5fbfch84fbh0sickm09l9vrj"; depends=[Rfit]; }; Rbgs = derive2 { name="Rbgs"; version="0.2"; sha256="1q0dnbcpgx7x9klr6z33z6g2p9p8mrmhnsqjy6qw15ch720rrgn3"; depends=[imager magrittr rJava]; }; Rbitcoin = derive2 { name="Rbitcoin"; version="0.9.2"; sha256="0ndq4kg1jq6h0jxwhpdp8sw1n5shg53lwa1x0bi7rifmy0gnh66f"; depends=[data_table digest RCurl RJSONIO]; }; @@ -3031,15 +3087,16 @@ in with self; { RcextTools = derive2 { name="RcextTools"; version="0.1.1"; sha256="1rrij4ryspff9mn1c3jlzjprnipak7nzlb488pk0ci0awaccp5ga"; depends=[data_table igraph sqldf visNetwork]; }; Rcgmin = derive2 { name="Rcgmin"; version="2013-2.21"; sha256="02igq7bdlxwa7ysfiyvqfhcvgm866lrp2z3060z5lmnp6afa0958"; depends=[numDeriv]; }; Rchoice = derive2 { name="Rchoice"; version="0.3-1"; sha256="1mx50270vbhvng4vdcc6w94f3l890vjl41y07bqkv40n93fxvffw"; depends=[Formula maxLik msm plm plotrix]; }; + Rclean = derive2 { name="Rclean"; version="1.0.0"; sha256="065jq957xsk9p1nnzf8ilp9swjfxhydgc7xg57lfcg9hz99ckwfr"; depends=[formatR igraph jsonlite]; }; Rclusterpp = derive2 { name="Rclusterpp"; version="0.2.3"; sha256="02s5gmmmd0l98wd1y884pjl3h289dyd9p9s7dh7yl2zaslqs2094"; depends=[Rcpp RcppEigen]; }; - Rcmdr = derive2 { name="Rcmdr"; version="2.4-2"; sha256="0027s3g7wzjaqnx3yhn9whpxsrvz7ar70r1a0lwd5hs6g008m8ja"; depends=[abind car effects RcmdrMisc relimp tcltk2]; }; - RcmdrMisc = derive2 { name="RcmdrMisc"; version="1.0-8"; sha256="1lc26k2f6r37id85baii7rr5m36vy34p6xxl1fjs87s94zifkfsp"; depends=[abind car colorspace e1071 foreign haven Hmisc MASS nortest readstata13 readxl sandwich]; }; + Rcmdr = derive2 { name="Rcmdr"; version="2.4-4"; sha256="0n15wkhn8hfhcpz0n2ngxkfaysjsizksxxr1fhpfjmlpy4wxxnx0"; depends=[abind car effects RcmdrMisc relimp tcltk2]; }; + RcmdrMisc = derive2 { name="RcmdrMisc"; version="1.0-10"; sha256="1fxcm0iwxdqh9qv2g6w7sqbg23zgl5z5ib2x69j5n10fglx89m8f"; depends=[abind car colorspace e1071 foreign haven Hmisc MASS nortest readstata13 readxl sandwich]; }; RcmdrPlugin_BCA = derive2 { name="RcmdrPlugin.BCA"; version="0.9-8"; sha256="0xkip7q9i57ghgz0rh0pl8nkl7bflf4w1g4zbyjdlcjypyf7lnr8"; depends=[BCA car flexclust foreign nnet Rcmdr RcmdrMisc rpart rpart_plot]; }; RcmdrPlugin_BiclustGUI = derive2 { name="RcmdrPlugin.BiclustGUI"; version="1.1.1"; sha256="1sdc8ibggz8wpn77g7hddyl7lg86dbyw8qax63p6cqx1pfhb4rra"; depends=[BcDiag BiBitR BicARE biclust fabia gplots iBBiG Rcmdr rqubic s4vd superbiclust viridis]; }; RcmdrPlugin_DoE = derive2 { name="RcmdrPlugin.DoE"; version="0.12-3"; sha256="1iifn71kjjgcp7dfz2pjq57mgbv4rrznrl3b3k9gdc2dva1z9zvc"; depends=[DoE_base DoE_wrapper FrF2 Rcmdr RcmdrMisc relimp]; }; RcmdrPlugin_EACSPIR = derive2 { name="RcmdrPlugin.EACSPIR"; version="0.2-2"; sha256="10r6rb0fwlilcnqxa38zh7yxc54x1a0by5x4f6gzdn9zs7aj5l1r"; depends=[abind ez nortest R2HTML Rcmdr RcmdrMisc reshape]; }; RcmdrPlugin_EBM = derive2 { name="RcmdrPlugin.EBM"; version="1.0-10"; sha256="02zips1jbfn7cshjlrm1gr632px2zxlys8i0f1nrf1gifl44v1qw"; depends=[abind epiR Rcmdr]; }; - RcmdrPlugin_EZR = derive2 { name="RcmdrPlugin.EZR"; version="1.36"; sha256="0yj9z9x185p4kqn10hm6mrl6i64dwyaaywzlmbgzd51m1112fp6r"; depends=[Rcmdr]; }; + RcmdrPlugin_EZR = derive2 { name="RcmdrPlugin.EZR"; version="1.37"; sha256="1l990nv5xb6slpk7s5k662ln5gp190g0rr3qxrbh44z0j9vnxl2p"; depends=[Rcmdr readstata13]; }; RcmdrPlugin_EcoVirtual = derive2 { name="RcmdrPlugin.EcoVirtual"; version="1.0"; sha256="0q879wnrmgbaddv883q9zdnp0i7kjcgn8cffv7lp8nrsqil6l7mc"; depends=[EcoVirtual Rcmdr]; }; RcmdrPlugin_Export = derive2 { name="RcmdrPlugin.Export"; version="0.3-1"; sha256="17fn3si6b6h20c52k1k6fv9mslw3f9v0x1kxixzcvq54scdx0sk0"; depends=[Hmisc Rcmdr xtable]; }; RcmdrPlugin_FactoMineR = derive2 { name="RcmdrPlugin.FactoMineR"; version="1.6-0"; sha256="07k9x3mdaqzk1503wjsha9f8bxzw1074i9g7sa16yqz5lwky4lr7"; depends=[FactoMineR Rcmdr]; }; @@ -3059,7 +3116,7 @@ in with self; { RcmdrPlugin_SLC = derive2 { name="RcmdrPlugin.SLC"; version="0.2"; sha256="1nwpzmgfla1y05dxf81w0wmvvmvcq5jn5k8phlq30920ia7ybs8g"; depends=[Rcmdr SLC]; }; RcmdrPlugin_SM = derive2 { name="RcmdrPlugin.SM"; version="0.3.1"; sha256="10sjh2x02kb6yaxbvd9ihc6777j4iv6wi6k42gyl3k7i2c39fyn3"; depends=[car colorspace Rcmdr RColorBrewer vcd]; }; RcmdrPlugin_TeachingDemos = derive2 { name="RcmdrPlugin.TeachingDemos"; version="1.1-0"; sha256="0fgl1v1g74ca14pf3mmbv26j09v7jy6ddyap5qavgiy9s8qrwrh8"; depends=[Rcmdr rgl TeachingDemos tkrplot]; }; - RcmdrPlugin_UCA = derive2 { name="RcmdrPlugin.UCA"; version="4.1-2"; sha256="1gg6gi0l0vzcp29c3s8law68bgyms0hczpk41wzzcvvvkhdbr7xi"; depends=[car randtests Rcmdr TeachingDemos tseries]; }; + RcmdrPlugin_UCA = derive2 { name="RcmdrPlugin.UCA"; version="4.1-4"; sha256="0wzcqmrv9qvdcrcz0vcp5fl8f71zg6c355qrr9476524aidb29my"; depends=[randtests Rcmdr TeachingDemos tseries]; }; RcmdrPlugin_aRnova = derive2 { name="RcmdrPlugin.aRnova"; version="0.0.5"; sha256="0ys3565pcbr554yb1gi2h149vhvwc0gdfmh7mz8zzd4367hqn553"; depends=[Rcmdr]; }; RcmdrPlugin_coin = derive2 { name="RcmdrPlugin.coin"; version="1.0-22"; sha256="0qmdjnjmgq52wgl4llg69q9x7hvwd73mz3swv0sv88v8zqg7xj93"; depends=[coin multcomp Rcmdr survival]; }; RcmdrPlugin_depthTools = derive2 { name="RcmdrPlugin.depthTools"; version="1.3"; sha256="09mjn5jn4rdj1lh515vr3xlnk615flg13kcwbpk0an2si4xkgm9h"; depends=[depthTools Rcmdr]; }; @@ -3079,7 +3136,7 @@ in with self; { RcmdrPlugin_temis = derive2 { name="RcmdrPlugin.temis"; version="0.7.9"; sha256="0nacpipaimb1348rhv1rma85gnd38wsg741pz7xpvn347wnnc0wz"; depends=[ca lattice latticeExtra NLP R2HTML Rcmdr RColorBrewer slam stringi tcltk2 tm zoo]; }; Rcolombos = derive2 { name="Rcolombos"; version="2.0.2"; sha256="0l92icjqqm5fxafqwd09lnmv5x6kvjdg8cphlm37q86nslwr5rkk"; depends=[httr]; }; Rcplex = derive2 { name="Rcplex"; version="0.3-3"; sha256="0abmrqphrpdlc831hwbwx15z4vdgn385kxhnqlbb9v0sjmfyszsl"; depends=[slam]; }; - Rcpp = derive2 { name="Rcpp"; version="0.12.15"; sha256="1pnv6sl4vdn69ygmgrb1b3gsigfdcfb56wnzikic93l8gkvdsvxv"; depends=[]; }; + Rcpp = derive2 { name="Rcpp"; version="0.12.16"; sha256="1rm8hcy72p1jvxikvmkwg20pjqmvmfvqb45lfghmddp2adp67qfl"; depends=[]; }; Rcpp11 = derive2 { name="Rcpp11"; version="3.1.2.0"; sha256="1x6n1z7kizagr5ymvbwqb7nyn3lca4d4m0ks33zhcn9gay6g0fac"; depends=[]; }; RcppAPT = derive2 { name="RcppAPT"; version="0.0.4"; sha256="0xbaamv3bg08ymbmiq6kwh86p17y6qzgydq02syig2a3ykp0042c"; depends=[Rcpp]; }; RcppAlgos = derive2 { name="RcppAlgos"; version="1.0.1"; sha256="0668anb3kjw3h71n2hjqqjrmiz4dwrgw71ikviq0imw2v5030392"; depends=[Rcpp]; }; @@ -3088,10 +3145,10 @@ in with self; { RcppBDT = derive2 { name="RcppBDT"; version="0.2.3"; sha256="0gnj4gz754l80df7w3d5qn7a57z9kq494n00wp6f7vr8aqgq8wi1"; depends=[BH Rcpp]; }; RcppBlaze = derive2 { name="RcppBlaze"; version="0.2.2"; sha256="0hi7gh7xlmdcyzxsis8wl841d6czbcgb8qdg8y822am1mvc0wmb7"; depends=[BH Matrix Rcpp]; }; RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.2.3"; sha256="0cb04filbr0mymcg891lc0dw2b3fnjmhn8z50xcilb3v72ccrvqg"; depends=[Rcpp]; }; - RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.8"; sha256="0fwz942pd1r7jcxwqjbagcai153kv7csflhg7agwhxyj49m97i82"; depends=[Rcpp]; }; + RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.9"; sha256="0c6vdrf16f8fyaczzwapzn513wrdklsc8izmzfmfbc58s5500gvk"; depends=[Rcpp]; }; RcppCWB = derive2 { name="RcppCWB"; version="0.1.7"; sha256="13iax4kr5gchm483gib3cdjcbvkymhiwbpnj705c325fbsfk5rj7"; depends=[Rcpp]; }; RcppClassic = derive2 { name="RcppClassic"; version="0.9.9"; sha256="102gi1l6hxdkz50iy9xbpb57iy5j7flv78sdq36pn9zi8x4k8k95"; depends=[Rcpp]; }; - RcppClassicExamples = derive2 { name="RcppClassicExamples"; version="0.1.1"; sha256="0shs12y3gj5p7gharjik48dqk0fy4k2jx7h22ppvgbs8z85qjrb8"; depends=[Rcpp RcppClassic]; }; + RcppClassicExamples = derive2 { name="RcppClassicExamples"; version="0.1.2"; sha256="0dr2104miy7psr73nicfs84652ai0d5liw6wxcwyrx7fmys3p638"; depends=[Rcpp RcppClassic]; }; RcppDE = derive2 { name="RcppDE"; version="0.1.5"; sha256="1zgz8h7d7jjml9hm164y9wrsgcb1fymp3ipxp235fmk44lbrwpcw"; depends=[Rcpp RcppArmadillo]; }; RcppDL = derive2 { name="RcppDL"; version="0.0.5"; sha256="1gii00bna6k9byaax7gsx42dv1jjnkrp4clbmdq59ybq3vkvw8z2"; depends=[Rcpp]; }; RcppEigen = derive2 { name="RcppEigen"; version="0.3.3.4.0"; sha256="1m6ssq6lvi36ggf26y4hhq996583pxxdb978jnn1x6r9gdb0q0hi"; depends=[Matrix Rcpp]; }; @@ -3110,8 +3167,7 @@ in with self; { RcppQuantuccia = derive2 { name="RcppQuantuccia"; version="0.0.2"; sha256="1si5njb8g4g6fjrkqbp3y6z23yxs901nq9kmiwwbqs8di6svc5q3"; depends=[BH Rcpp]; }; RcppRedis = derive2 { name="RcppRedis"; version="0.1.8"; sha256="05c4c65ayiqyzmkj2mrgwwflgjk54rf9nmb3rhickj16yy9b071q"; depends=[BH RApiSerialize Rcpp]; }; RcppRoll = derive2 { name="RcppRoll"; version="0.2.2"; sha256="19xzvxym8zbighndygkq4imfwc0abh4hqyq3qrr8aakyd096iisi"; depends=[Rcpp]; }; - RcppSMC = derive2 { name="RcppSMC"; version="0.2.0"; sha256="063ds546hd5dfsickiawm5c92sw2kb6n79fqz4gy4hvnbkf00q84"; depends=[Rcpp RcppArmadillo]; }; - RcppShark = derive2 { name="RcppShark"; version="3.1.1"; sha256="0dy6zksxcsbzjyz0f147rk2amwjsrjdcyl6jn767pw9ij9vdzh6r"; depends=[BH checkmate Rcpp]; }; + RcppSMC = derive2 { name="RcppSMC"; version="0.2.1"; sha256="0k2k1pj05i6hf7gpar3r4mbv9cs04bd4v657saq9vhy30300vg49"; depends=[Rcpp RcppArmadillo]; }; RcppStreams = derive2 { name="RcppStreams"; version="0.1.1"; sha256="0sa0ndnfm89f8lh3ba6jf3gxaan1g97dhlzbmpkwqj22frgggqjw"; depends=[BH Rcpp]; }; RcppTN = derive2 { name="RcppTN"; version="0.2-2"; sha256="0m2wc5n1fzxv56s4gqqnygb24dbadgrpgjm4bs4hr6qazgjapymf"; depends=[Rcpp]; }; RcppTOML = derive2 { name="RcppTOML"; version="0.1.3"; sha256="0krw4104m8drgyf53aq22kl5q0abrd0y4j1fvrwsj1dkbkybas05"; depends=[Rcpp]; }; @@ -3128,7 +3184,7 @@ in with self; { Rdice = derive2 { name="Rdice"; version="1.0.0"; sha256="1xibvm690808p2g3jch7rh1825yrpgln2hjfclgxjwn822qvs4xr"; depends=[data_table]; }; Rdimtools = derive2 { name="Rdimtools"; version="0.3.2"; sha256="0wk6sv2ahxscy4nsk826c9rlq8vxgnflg9banwdxhs6qlqhipnlb"; depends=[ADMM CVXR Matrix Rcpp RcppArmadillo Rcsdp Rdpack RSpectra Rtsne]; }; Rdistance = derive2 { name="Rdistance"; version="1.3.2"; sha256="1ajmr58lgc74727jiydfrh4j6ra7vq8hp8nm3l2s3g2mc8n1mqk5"; depends=[]; }; - Rdpack = derive2 { name="Rdpack"; version="0.5-5"; sha256="19rib96758r2zkq4wlys0gfj60zff34gv1wpb8d7pa34h81gpi9p"; depends=[bibtex gbRd]; }; + Rdpack = derive2 { name="Rdpack"; version="0.7-0"; sha256="0j8jh5zj4nhcchl3xr6n6bvc4m0irjz44mw5690f7iqfi3mzkii6"; depends=[bibtex gbRd]; }; Rdrools = derive2 { name="Rdrools"; version="1.0.3"; sha256="1y805j2xrv8kgh42s5lig07mb76fcz5yrxal0zaykj16cvid8287"; depends=[Rdroolsjars rJava]; }; Rdroolsjars = derive2 { name="Rdroolsjars"; version="1.0.1"; sha256="1l9bc1bwpj10irr973hzkhr04i1f3g998n8hcl2k2i9kgv1naqmz"; depends=[rJava]; }; Rdsdp = derive2 { name="Rdsdp"; version="1.0.4-2"; sha256="05bk6yqvhzvyfzga1dz34w68nlwl2dc8bvhh3ghd07a61fsnkg4x"; depends=[]; }; @@ -3148,8 +3204,8 @@ in with self; { RefManageR = derive2 { name="RefManageR"; version="0.14.20"; sha256="18g2w32ldfakmnmlk1gaxq64jhx4iy7kil1s7g6lnvv1fygxpg8k"; depends=[bibtex httr jsonlite lubridate plyr stringr xml2]; }; RegClust = derive2 { name="RegClust"; version="1.0"; sha256="1d9w74phw4fgafglc18j7dpmln96fvxnf1kdc9zddgj90p8yfx63"; depends=[]; }; RegressionFactory = derive2 { name="RegressionFactory"; version="0.7.2"; sha256="1g23paq42xiiqavikbrflwmr8ikls9z97v1xpgg16pb88svdyayc"; depends=[]; }; - RegularizedSCA = derive2 { name="RegularizedSCA"; version="0.5.0"; sha256="02mf1iy3npa5611kc9ifqcl9ap2bhab9qq5pn6cfyw9lxa3q1if0"; depends=[ggplot2 gtools psych RGCCA]; }; - ReinforcementLearning = derive2 { name="ReinforcementLearning"; version="1.0.1"; sha256="12qah22gq9360mw7z2bpcaqyqan10qqbnzyqmkafbkb5jq6fnfx9"; depends=[data_table ggplot2 hash]; }; + RegularizedSCA = derive2 { name="RegularizedSCA"; version="0.5.3"; sha256="1d7rzvai36h7nmfvi6fdabba3rfa68x53li9jdrlk77mgpgr9vhw"; depends=[colorspace ggplot2 gtools lattice mice psych RGCCA]; }; + ReinforcementLearning = derive2 { name="ReinforcementLearning"; version="1.0.2"; sha256="1khk3yi0ixs4lzvng9pjmyyiy86bh5bx7wdyr915p1nbhq6yl2cl"; depends=[data_table ggplot2 hash]; }; RelValAnalysis = derive2 { name="RelValAnalysis"; version="1.0"; sha256="1jl1gfj44gfkmc1yp6g5wwn4miydwpvxwrg76rnkv9454zrc5pvp"; depends=[zoo]; }; Relatedness = derive2 { name="Relatedness"; version="2.0"; sha256="1aidklwk8q2wdfsmhlbd3vzq9kzsyh4wn1g28biyb6lq7iwq1hl4"; depends=[]; }; Reliability = derive2 { name="Reliability"; version="0.0-2"; sha256="12zsicgbjqih3grbs62pw37x8wlkmnyc7g0yz6bqnfb4ym2yb7fg"; depends=[]; }; @@ -3162,8 +3218,8 @@ in with self; { RepeatABEL = derive2 { name="RepeatABEL"; version="1.1"; sha256="00bq9ls4d0kczdv752xasqbavb11bjfvpriggfc8dw3g3i7pizpg"; depends=[GenABEL hglm]; }; RepeatedHighDim = derive2 { name="RepeatedHighDim"; version="2.0.0"; sha256="1n9w4jb25pm0mmsahlfhkp9jmhgp5b21l1g85gm2wbxqkjsg7g0g"; depends=[MASS nlme]; }; Replicate = derive2 { name="Replicate"; version="1.0.1"; sha256="110pvissyv3dx1wpwpngcg18mpmpml49gcmdykip55s1d3ljf791"; depends=[metafor]; }; - ReporteRs = derive2 { name="ReporteRs"; version="0.8.9"; sha256="1wsqbn231xqs87dmcry13bdkvv09y17jfqkdnpigcsiivbh3zr3x"; depends=[gdtools htmltools knitr png R_utils ReporteRsjars rJava rvg shiny xml2]; }; - ReporteRsjars = derive2 { name="ReporteRsjars"; version="0.0.3"; sha256="0rn000xkkda08kfh1b1l01piw596j3rca8sv4r23q52indrm7vzs"; depends=[rJava]; }; + ReporteRs = derive2 { name="ReporteRs"; version="0.8.10"; sha256="18ivgd3736zcrimcyzfkh5d6h9s1srh7xdz597y596dsssx1lmc6"; depends=[gdtools htmltools knitr png R_utils ReporteRsjars rJava rvg shiny xml2]; }; + ReporteRsjars = derive2 { name="ReporteRsjars"; version="0.0.4"; sha256="0q11jcbkv9ibmkqr3mka0w5d797s8xb0155kcs5inlcacirp6wvy"; depends=[rJava]; }; ResistorArray = derive2 { name="ResistorArray"; version="1.0-28"; sha256="055zr4rybgrvg3wsgd9vhyjpvzdskrlss68r0g7rnj4yxkix0kxz"; depends=[]; }; ResourceSelection = derive2 { name="ResourceSelection"; version="0.3-2"; sha256="08b1aa3183k1y30dwabnd6x353mdp2sn5b908cpv84bs3fdzlrdp"; depends=[MASS Matrix pbapply]; }; RevEcoR = derive2 { name="RevEcoR"; version="0.99.3"; sha256="1nym263ynjdir5kxv35jnmki9mshlplq0sk3xnjd4ac6f1cfbfqj"; depends=[gtools igraph magrittr Matrix plyr purrr stringr XML]; }; @@ -3173,14 +3229,15 @@ in with self; { Rfit = derive2 { name="Rfit"; version="0.23.0"; sha256="1gxxipbh7mskrqwrpk1gf1dn8mp3l1v4hgmzii44bppffnxs7slp"; depends=[]; }; Rfmtool = derive2 { name="Rfmtool"; version="2.0.0"; sha256="1a8s4a4mdblzy76ljslfvz8zav2639plhby0ib5ccjnpz2sxhc7s"; depends=[]; }; Rga4gh = derive2 { name="Rga4gh"; version="0.1.1"; sha256="0h5y722blkkwn6ask6vjnhl22v9l6511chdm50ig6xcs5dvjam2m"; depends=[httr jsonlite]; }; - Rgb = derive2 { name="Rgb"; version="1.5.1"; sha256="136mhxwnw7jkfnmb5gxjr2xfnly79xfp6a6f9c8lj7s6wrgkl02a"; depends=[]; }; + Rgb = derive2 { name="Rgb"; version="1.6.1"; sha256="0qs3dlv4g45dqphqjm23ky3w6rxh8ff2q6b17kvf57skyf1b1yn8"; depends=[]; }; Rgbp = derive2 { name="Rgbp"; version="1.1.2"; sha256="1g5v22zjgykzcg5jk7fi03xfn3jzz1yf38izjzhx2433d97hasr7"; depends=[mnormt sn]; }; Rglpk = derive2 { name="Rglpk"; version="0.6-3"; sha256="03v4cav465dkznm7d3bwwpx3qprhq25sp1rb5ncx2lka6inr1vzd"; depends=[slam]; }; Rgnuplot = derive2 { name="Rgnuplot"; version="1.0.3"; sha256="0mwpq6ibfv014fgdfsh3wf8yy82nzva6cgb3zifn3k9lnr3h2fj7"; depends=[]; }; RgoogleMaps = derive2 { name="RgoogleMaps"; version="1.4.1"; sha256="0fsmlnhl4kw2j4972kfanzw9njhnzk695gsyw8g6yppsmz2clcaq"; depends=[png]; }; - Rgretl = derive2 { name="Rgretl"; version="0.2.1"; sha256="07a83nmx3q0yl7fbwqmkmnzxm5rrh8p4nrayv3rj18s1r98i4jph"; depends=[lubridate png xml2]; }; + Rgretl = derive2 { name="Rgretl"; version="0.2.2"; sha256="18jyp4bxs96ri1a4ifd52aj0q6kd2dygz8pkajbd9whq7bn5ick6"; depends=[lubridate png xml2]; }; Rhpc = derive2 { name="Rhpc"; version="0.18-12"; sha256="095mrr6g05y9g8h88k1nf19zmjvg8hnmf5b3r6krqs4cxhp2qls2"; depends=[]; }; RhpcBLASctl = derive2 { name="RhpcBLASctl"; version="0.18-12"; sha256="14qypi76h73iv3xwbb860r4f7516jyb88j92lmkifw03x86lx2b3"; depends=[]; }; + Ricetl = derive2 { name="Ricetl"; version="0.2.5"; sha256="0q87cxzqkkp2bk92q3wnxxsqlkafkd37lp5pki7f87a5vcxlcrak"; depends=[devtools gWidgets gWidgetsRGtk2 plyr readr readxl stringr tidyverse writexl]; }; RidgeFusion = derive2 { name="RidgeFusion"; version="1.0-3"; sha256="10llmrsfpcqrkcbw7zj44kvfy7ywn9rk49n7zplilz8h94zzcmjv"; depends=[mvtnorm]; }; Ridit = derive2 { name="Ridit"; version="1.1"; sha256="02cni6hzf1bsns7vi8vklnhc0pfb5vwqhjnnfnjnnaxpzpsbvdfn"; depends=[]; }; Rilostat = derive2 { name="Rilostat"; version="0.2.1"; sha256="058qz5kn7p8wn3lvw92c11cqpkz9brgf1igmawfkb0lqvj366vyd"; depends=[data_table dplyr DT haven plyr RCurl readr stringr tibble xml2]; }; @@ -3188,13 +3245,13 @@ in with self; { Risk = derive2 { name="Risk"; version="1.0"; sha256="1i42xcc699syj108mvgklwb30wkf9c9jrg5rmd2ypnqk9mnyg2fg"; depends=[]; }; RiskPortfolios = derive2 { name="RiskPortfolios"; version="2.1.1"; sha256="1kn0vb4nhm3bxlmk5y2nl5m7a7hdvz3nz0yp8rdigpl6b2dp79w1"; depends=[MASS nloptr quadprog]; }; Ritc = derive2 { name="Ritc"; version="1.0.2"; sha256="03smhxjhjfkc9pxhlgg54b6v2jznpmnws8373qpvn9a9ky5bcq2l"; depends=[minpack_lm]; }; - RiverBuilder = derive2 { name="RiverBuilder"; version="0.1.0"; sha256="0qs21qz1zc0wsykd7qhry93il6qz255mgxyxnrdmxf5989k5mvxi"; depends=[]; }; + RiverBuilder = derive2 { name="RiverBuilder"; version="0.1.1"; sha256="06cd1m4liv2bsh2sxplq2zl45g9zq8gsgvh14d0zr0pqm8z4dsyw"; depends=[]; }; Rivivc = derive2 { name="Rivivc"; version="0.9"; sha256="0gl3040pp9nqm4g2ympnx80z64zfnn1hfsxka8ynd2cqhjn3b5i1"; depends=[signal]; }; Rjpstatdb = derive2 { name="Rjpstatdb"; version="0.1"; sha256="0iwgsp3mblp7bsx88wfpqn09y1xrkingfkm3z9jsi2bwrnrjc2iv"; depends=[RCurl XML]; }; RkMetrics = derive2 { name="RkMetrics"; version="1.3"; sha256="1k6vnr1r4h69iznib638z45gd0f8wc4g4h0ji9f0017883g77li1"; depends=[]; }; Rknots = derive2 { name="Rknots"; version="1.3.2"; sha256="1krhma8hy3l5lbm6d8rxjlj9jw1zrd16h4wy4p1clfa5vlhh3bwi"; depends=[bio3d rgl rSymPy]; }; Rlab = derive2 { name="Rlab"; version="2.15.1"; sha256="1pb0pj84i1s4ckdmcglqxa8brhjha4y4rfm9x0na15n7d9lzi9ag"; depends=[]; }; - Rlabkey = derive2 { name="Rlabkey"; version="2.2.0"; sha256="1gzywhbdkd4f392fasa91ral8wg7jr51b4n1kll7r8hvyjz7bmgy"; depends=[httr Rcpp rjson]; }; + Rlabkey = derive2 { name="Rlabkey"; version="2.2.1"; sha256="1nsaab7nysld1gdqnpxd9g68vzs363szyinbfn6j2c7ch0vqcrka"; depends=[httr Rcpp rjson]; }; Rlda = derive2 { name="Rlda"; version="0.2.4"; sha256="01dh6x0yh9y7q8c8qy0zkkn2y18wzg5y90v4gcawdb1adz46izg2"; depends=[coda doParallel foreach gtools Rcpp RcppArmadillo RcppProgress]; }; Rlibeemd = derive2 { name="Rlibeemd"; version="1.4.0"; sha256="0nnkblrgycvfwn0lb9j92f5wpln69kk54z4irwi35rrfl31f689m"; depends=[Rcpp]; }; Rlinkedin = derive2 { name="Rlinkedin"; version="0.2"; sha256="15sbiis1d0s466nqk1adjhflb01sb9kn25f4y6sagkdggvyz6b56"; depends=[httpuv httr XML]; }; @@ -3208,7 +3265,7 @@ in with self; { RmixmodCombi = derive2 { name="RmixmodCombi"; version="1.0"; sha256="0cwcyclq143938wby0aj265xyib6gbca1br3x09ijliaj3pjgdqi"; depends=[Rcpp Rmixmod]; }; Rmosek = derive2 { name="Rmosek"; version="1.2.5.1"; sha256="0zggv699s93i9g98qjs4ci2nprgfkzq45lpzgrbhldsxiflf27gz"; depends=[Matrix]; }; Rmpfr = derive2 { name="Rmpfr"; version="0.7-0"; sha256="0jpj3nl76jd6vc2p1xwr8jl62q8ckwsdaxqnk9b20srkq63mfrig"; depends=[gmp]; }; - Rmpi = derive2 { name="Rmpi"; version="0.6-6"; sha256="184skad8m4y4pzk8v98b7k7prqxm9mg1b2pfxbknyvzakq6aizv1"; depends=[]; }; + Rmpi = derive2 { name="Rmpi"; version="0.6-7"; sha256="1b62gs7w1xqadqd7ir41jnxlcf14gcqfxd0915kn9ckdlsdrh0sw"; depends=[]; }; RnavGraph = derive2 { name="RnavGraph"; version="0.1.8"; sha256="1fwzfy41gdr1aw1wg6dw04mxwwpp5s9x2inxyq3bc9s8bm1rlxih"; depends=[graph rgl scagnostics]; }; RnavGraphImageData = derive2 { name="RnavGraphImageData"; version="0.0.3"; sha256="1mrh0p2ckczw4xr1kfmcf0ri2h2fhp7fmf8sn2h1capmm12i1q8f"; depends=[]; }; RndTexExams = derive2 { name="RndTexExams"; version="1.4.1"; sha256="1gi96hfd7dkvmbvy6hj25g1l7nwk4yhxkdjx1l3ws3c2zpi27cvj"; depends=[CopyDetect data_table stringi stringr]; }; @@ -3225,11 +3282,11 @@ in with self; { Robocoap = derive2 { name="Robocoap"; version="0.1-1"; sha256="0aj6iv85a1zfaknjhrzf6lnf0qn726dvnj4dywg9nii1kkqrkq2w"; depends=[data_table igraph markovchain tm]; }; RobustAFT = derive2 { name="RobustAFT"; version="1.4-1"; sha256="180gmlinrpnk4ghl1xickbjkdqr7vb6qzmy6701xpji5k8g9il60"; depends=[robustbase survival]; }; RobustCalibration = derive2 { name="RobustCalibration"; version="0.5.0"; sha256="1pkgwglnb68563hiirkagz33jfksbzj3cvdyv13brrzx6jzcvw11"; depends=[Rcpp RcppEigen RobustGaSP]; }; - RobustGaSP = derive2 { name="RobustGaSP"; version="0.5.4"; sha256="1zq62vx5bq2wbdh9irmcfpbpr83qqr9m9icbpksxc8bp9zdsdzkq"; depends=[Rcpp RcppEigen]; }; + RobustGaSP = derive2 { name="RobustGaSP"; version="0.5.5"; sha256="0asxhzybpfmz3zzhr32hvcxrdmdsjlqjvxiihrxc8f4w3qwnzb82"; depends=[Rcpp RcppEigen]; }; RobustRankAggreg = derive2 { name="RobustRankAggreg"; version="1.1"; sha256="1pslqyr1lji1zvcrwyax4zg2s81p1jnhfldz8mdfhsp5y7v8iar3"; depends=[]; }; RockFab = derive2 { name="RockFab"; version="1.2"; sha256="1b5mhfll5vmqwl4pblmclyx9604vn07jyza02rm0jcsx915ms8sc"; depends=[EBImage rgl]; }; Rodam = derive2 { name="Rodam"; version="0.1.2"; sha256="0fxsjzillr2v3sxbph13q3wrly6dx6m8rm276qzfvx1md044z14y"; depends=[RCurl]; }; - RonFHIR = derive2 { name="RonFHIR"; version="0.1.0"; sha256="14a5s9w77gb8v4ak5rv22m38d7ga4p4nnqqqhp41jj1snqqw45h3"; depends=[httr jsonlite R6]; }; + RonFHIR = derive2 { name="RonFHIR"; version="0.2.0"; sha256="1kcbv8ibqh7jb3dpj4p73vd168c6vlwi08s9cshl4w6hqbz1pklg"; depends=[httr jsonlite R6]; }; Rook = derive2 { name="Rook"; version="1.1-1"; sha256="00s9a0kr9rwxvlq433daxjk4ji8m0w60hjdprf502msw9kxfrx00"; depends=[brew]; }; RootsExtremaInflections = derive2 { name="RootsExtremaInflections"; version="1.1"; sha256="11wybhw180r4zaqwfs301zwzfzprwwl4hiyhjj78l3mnxgdnmwz7"; depends=[doParallel foreach iterators]; }; Rothermel = derive2 { name="Rothermel"; version="1.2"; sha256="0zrz2ck3q0vg0wpa4528rjlrfnvlyiy0x1gr5z1aax1by7mdj82s"; depends=[ftsa GA]; }; @@ -3239,9 +3296,9 @@ in with self; { RpeakChrom = derive2 { name="RpeakChrom"; version="1.1.0"; sha256="1r8f6knpz83arz2kabizx5yyh1myg0h310qlwh8rmy88cdxi1ps9"; depends=[ggplot2 minpack_lm pracma ptw]; }; Rphylip = derive2 { name="Rphylip"; version="0.1-23"; sha256="0kpqmik4bhr74ib8yvaavr10z4v4w3li5vibdhz7lvz35jfirg9r"; depends=[ape]; }; Rphylopars = derive2 { name="Rphylopars"; version="0.2.9"; sha256="19y0j5vh82sa9jigylxhv0s0hgjyhx3xq4blvk55jhpj8v7iyiky"; depends=[ape doBy geiger MASS Matrix mvnmle phylolm phytools Rcpp RcppArmadillo]; }; - Rpolyhedra = derive2 { name="Rpolyhedra"; version="0.1.0"; sha256="06i8pmvn7fl8likxzzqzkggqf7x20pwi10mcv4x46cacil80ir2z"; depends=[futile_logger R6 rgl stringr testthat]; }; + Rpolyhedra = derive2 { name="Rpolyhedra"; version="0.2.4"; sha256="1klianmsm3msgy5sbigxzx1mzsl915hmam6h2llr274r5gqhg4wh"; depends=[futile_logger R6 rgl stringr testthat XML]; }; Rpoppler = derive2 { name="Rpoppler"; version="0.1-0"; sha256="19nvv45ahp0c241p1xzlq0sq5qarqg66jw5f1anhqnfi2hi91hcm"; depends=[]; }; - Rprofet = derive2 { name="Rprofet"; version="1.1.0"; sha256="1aflqic2jfx9y6mxj155n0900xp20g1lliq8ad4nd4z2k0rfcpi2"; depends=[binr ClustOfVar ggplot2 gridExtra plyr sqldf]; }; + Rprofet = derive2 { name="Rprofet"; version="2.2.0"; sha256="1s0jkq83vfc9jsggnwm31r366b10n6sri2vzpwxybzpjq3d3w5qr"; depends=[binr ClustOfVar ggplot2 gridExtra plyr sqldf stringr]; }; Rquake = derive2 { name="Rquake"; version="2.4-0"; sha256="14s2mjq9qqxfvlwmq9126h67y5wr7irlc7945pgv1ab9hl1lgmz8"; depends=[GEOmap MBA minpack_lm rgl RPMG RSEIS]; }; Rramas = derive2 { name="Rramas"; version="0.1-5"; sha256="0wy0flzp68mikq4v9k5pv6hbzx0w9mpa74dwx79i3iiddn0ylby6"; depends=[diagram]; }; Rraven = derive2 { name="Rraven"; version="1.0.2"; sha256="0mhf0vv58la1xh8vc31ak1wfi47zsqbjgxy7zz4bjk90g6110jyp"; depends=[doParallel dplyr foreach kableExtra pbapply pbmcapply vegan warbleR]; }; @@ -3266,9 +3323,9 @@ in with self; { Ruchardet = derive2 { name="Ruchardet"; version="0.0-3"; sha256="0dgldi6fgp949c3455m9b4q6crqv530jph210xzph41vgw8a2q2v"; depends=[Rcpp]; }; Runiversal = derive2 { name="Runiversal"; version="1.0.2"; sha256="0667mspsjydmxi848c6wsf14gz72bmdj9b3lilma92b7fhqnv7ai"; depends=[]; }; Runuran = derive2 { name="Runuran"; version="0.24"; sha256="1528jzpg0m4gya63xjf7ya4x1c96anm6bpzjgsa1vq1a4dz9m4y9"; depends=[]; }; - RunuranGUI = derive2 { name="RunuranGUI"; version="0.2"; sha256="0k3vgn027c2zbrk7pc2wcy2h6dn2djhdi70m8fi1qpz6vg7k8c7x"; depends=[cairoDevice gWidgets gWidgetsRGtk2 RGtk2 Runuran rvgtest]; }; + RunuranGUI = derive2 { name="RunuranGUI"; version="0.3"; sha256="1h2bcc443z8vp4hjf4vss4ds5n6zc6x70kmw13b2431f56jq12fa"; depends=[cairoDevice gWidgets gWidgetsRGtk2 RGtk2 Runuran rvgtest]; }; Rvcg = derive2 { name="Rvcg"; version="0.17"; sha256="0ssmi8mqmq82qrw0hzrmfqpwnkxwdlfa6j049r4l3gn28cfqhg1j"; depends=[Rcpp RcppArmadillo RcppEigen]; }; - Rvmmin = derive2 { name="Rvmmin"; version="2017-7.18"; sha256="14jzwqwi1zd8sg1vb18hgvbvsax38hdqjy540qqhn2xb4z8qx3hy"; depends=[optextras]; }; + Rvmmin = derive2 { name="Rvmmin"; version="2018-4.17"; sha256="0mhzzwk311wa157l3n4x5x038asvjd81l45g1jclfsjr0smsffym"; depends=[optextras]; }; Rvoterdistance = derive2 { name="Rvoterdistance"; version="1.1"; sha256="16il36hkq1j6gyl5d8bx5khiiv6fy2m8vkhwiaaiqsliw2sspy4j"; depends=[Rcpp]; }; Rwave = derive2 { name="Rwave"; version="2.4-8"; sha256="1rmqwyj2r84sii0vfqhyhpi3n1n1zia2ca627fq9ksvwn110nrvh"; depends=[]; }; Rwinsteps = derive2 { name="Rwinsteps"; version="1.0-1"; sha256="0kzngkan9vydibnr3xm4pyz4v6kz0r4h19f0ngqpri07fkhdsxzd"; depends=[]; }; @@ -3276,7 +3333,6 @@ in with self; { RxODE = derive2 { name="RxODE"; version="0.6-1"; sha256="1dkz6kq9wq7q2xw2wdzii5682w9f7rmgq28g7pfh8ivimfg1q4bi"; depends=[brew digest dparser inline magrittr Matrix memoise R_utils Rcpp RcppArmadillo rex]; }; RxnSim = derive2 { name="RxnSim"; version="1.0.3"; sha256="0fi4aic2brfbl6rsnnfwqq7l8ygvlmr98w0v749l3djpgn7sfrig"; depends=[data_table fingerprint rcdk rJava]; }; Ryacas = derive2 { name="Ryacas"; version="0.3-1"; sha256="13qvd5gpdrjgzf6isk3529khd02852y3ajmpp5vl8vn9k1jxp86v"; depends=[Rcpp XML]; }; - Rz = derive2 { name="Rz"; version="0.9-1"; sha256="1cpsmfxijrfx06ydpjzbaak7gkad4jjk1ph9453l9zly1cwzgspj"; depends=[foreign formatR ggplot2 memisc psych RGtk2]; }; S2sls = derive2 { name="S2sls"; version="0.1"; sha256="0qq1rff2cdgrm5rj69jxgrl71i0wmzyn424fdvcg02zdv9ggqhd3"; depends=[spanel]; }; SACCR = derive2 { name="SACCR"; version="2.1"; sha256="184mw9q25b06zar4ii3na7c4x28ly922d5csfqkw9b07mdp81k3h"; depends=[data_tree jsonlite Trading]; }; SACOBRA = derive2 { name="SACOBRA"; version="0.7"; sha256="12aj4ghs3i3ks749z0l95ipv8gi33xgggkyjf21zvnzmb1dgphys"; depends=[testit]; }; @@ -3338,9 +3394,10 @@ in with self; { SGCS = derive2 { name="SGCS"; version="2.6"; sha256="09czgfc0mg64qcigp36kjaf52zlmrpz3m2d1dp42d9hhlciliqf5"; depends=[spatstat]; }; SGL = derive2 { name="SGL"; version="1.1"; sha256="1wc430jqn3li102zpfmyyavfbab7x7ww9p89clxsndyigrrbjdr7"; depends=[]; }; SGP = derive2 { name="SGP"; version="1.7-0.0"; sha256="0jjrrza8s6sj3gmmldnyxshfmcaf8xhp4g50vc3rcwnkg1jhzkg8"; depends=[Cairo colorspace crayon data_table digest doParallel doRNG equate foreach gridBase gtools iterators jsonlite matrixStats quantreg randomNames RSQLite sn toOrdinal]; }; - SGPdata = derive2 { name="SGPdata"; version="17.0-0.0"; sha256="1pjilyqwhgisz1iiy50l86dwc4dg3c8dzlpx7mm7n75049vzp2xq"; depends=[data_table]; }; + SGPdata = derive2 { name="SGPdata"; version="20.0-0.0"; sha256="0fxv7nnxiaq6z9wii9x5qiy0vd2z8jw3gcwl5fj9m29ja7j3900g"; depends=[crayon data_table]; }; SHELF = derive2 { name="SHELF"; version="1.3.0"; sha256="0qhkp1ypbimiq9r8yv95bipbmhm7b38ibbk9nmhdckrr6ymd2w35"; depends=[ggExtra ggplot2 MASS shiny tidyr]; }; SHIP = derive2 { name="SHIP"; version="1.0.2"; sha256="0b83cclibdz1r7sz968nmca4najwgps9wrdlsh4gxrl7fq40k4ln"; depends=[]; }; + SI = derive2 { name="SI"; version="0.1.0"; sha256="11ywmyz4mamk30p4m9qvgmba237s1xvabablh91rwq13089x8nxm"; depends=[]; }; SIBER = derive2 { name="SIBER"; version="2.1.3"; sha256="14ab9zid0i400kj924m2y5qgp2iibnpllhqw11rlmdf8j9cr7858"; depends=[dplyr ggplot2 hdrcde magrittr mnormt rjags spatstat_utils tidyr viridis]; }; SID = derive2 { name="SID"; version="1.0"; sha256="1446zy4rqbw0lpyhnhyd06dzv238dxpdxgmsk34hqv7g3j7q5h1w"; depends=[igraph Matrix pcalg RBGL]; }; SIDES = derive2 { name="SIDES"; version="1.11"; sha256="1gmhfj44qdklsdklmg8p35lmvlgla8i881i3iaziblslyscbyw9f"; depends=[doParallel foreach MASS memoise multicool nnet survival]; }; @@ -3400,6 +3457,7 @@ in with self; { SPEI = derive2 { name="SPEI"; version="1.7"; sha256="0lj7d3bbik7q4di5nqc3a1rn94z2y2v9x45r1jjkvgf03frj96qd"; depends=[ggplot2 lmomco]; }; SPIAssay = derive2 { name="SPIAssay"; version="1.1.0"; sha256="0y02122lj4v95g62w84jmdjdazfz3rch133aid5sgakj2kv68cvh"; depends=[]; }; SPIGA = derive2 { name="SPIGA"; version="1.0.0"; sha256="0yd06x5rh1h1s4v9apj43c90rkz8m5kssbny7y5mnw5mr2acds9b"; depends=[GA]; }; + SPINA = derive2 { name="SPINA"; version="4.1.0"; sha256="0x7y150iq072qqci2niqk7j8pvhcylb7kdvwambg1r1gi3ffycm9"; depends=[]; }; SPIn = derive2 { name="SPIn"; version="1.1"; sha256="109xxrg7bsmmfd6ik85kxrw2qclxbh5ipsh5mmrdl4hki3hnyp2s"; depends=[quadprog]; }; SPODT = derive2 { name="SPODT"; version="0.9-1"; sha256="01yq429a4s63855bwpn2mqjj2k3cz4187kfpi7n7qqdpdvmxz109"; depends=[rgdal sp tree]; }; SPOT = derive2 { name="SPOT"; version="2.0.2"; sha256="17apfbsh4qv3yhv7jpmmyz7whwx4ilm0krspxyc4knm3yxxw26bp"; depends=[DEoptim MASS nloptr randomForest rgenoud rsm]; }; @@ -3407,13 +3465,13 @@ in with self; { SPREDA = derive2 { name="SPREDA"; version="1.0"; sha256="1dyqsra899fd1nbk1b7vkw8gs455c6pbcvzw84q9iri77186xqhv"; depends=[nlme survival]; }; SPRT = derive2 { name="SPRT"; version="1.0"; sha256="1r4pfqh8k5avi8qgpk5x1cy8lmkn341yvjvd2r7wqwb3mr242r0v"; depends=[]; }; SPSL = derive2 { name="SPSL"; version="0.1-8"; sha256="1jg1nfhz8qml1wwqa4d0w7vkdmbgdy5xlfqx0h2pdw2z8iij3xxc"; depends=[]; }; - SPUTNIK = derive2 { name="SPUTNIK"; version="1.0.1"; sha256="1b8rawkcq15r4cyji245x59l1m3qkj0n31nhs1bjd3286zpdcg7b"; depends=[autothresholdr ggplot2 imager infotheo reshape SDMTools spatstat viridis viridisLite]; }; + SPUTNIK = derive2 { name="SPUTNIK"; version="1.0.2"; sha256="0hf6g3s17ri1qzl1180s4akyhp98lj6zx5ix1z6rh53gk6dvxb5l"; depends=[autothresholdr ggplot2 imager infotheo reshape SDMTools spatstat viridis viridisLite]; }; SPYvsSPY = derive2 { name="SPYvsSPY"; version="0.1.1"; sha256="1hxc73wwrzqh1r1xr9yd4hy4ma24virg4iv978lfyc9f9n56znp5"; depends=[]; }; SPmlficmcm = derive2 { name="SPmlficmcm"; version="1.4"; sha256="1acs3560a7h6xx286m40abr9b7i5qihn6wni8flj0biahmsszzx6"; depends=[nleqslv]; }; SPreFuGED = derive2 { name="SPreFuGED"; version="1.0"; sha256="1cdamkrr0xpc0l2dypd9lgjidrmalfxs0ms7z3wfmf22a8b3y0d2"; depends=[Biobase boot CMA lattice limma lme4 mvtnorm]; }; SQDA = derive2 { name="SQDA"; version="1.0"; sha256="0nfimk625wb64010r5r7hzr64jfwgc6rbn13wvrpn0jgayji87h6"; depends=[limma mvtnorm PDSCE]; }; SQN = derive2 { name="SQN"; version="1.0.5"; sha256="0kb8kf6g482zqdp4avwvhs3pqghfny757dbzfl1abaigmvwvx4qj"; depends=[mclust nor1mix]; }; - SQRL = derive2 { name="SQRL"; version="0.2.1"; sha256="01nad4j2q20agi62zay0n731ljwgil7ql0gick5s7f9khhciilf6"; depends=[RODBC]; }; + SQRL = derive2 { name="SQRL"; version="0.3.0"; sha256="1d4wnm03a900gyhayxkrqpwyxmj8mbqadhi3bzqvi6wb01517a0r"; depends=[RODBC]; }; SQUAREM = derive2 { name="SQUAREM"; version="2017.10-1"; sha256="10xj26x7qjyvzndnbjl5krr9wabnb9cbrnp3m7xg673g8ddr12cv"; depends=[]; }; SRCS = derive2 { name="SRCS"; version="1.1"; sha256="13zf3cqs53w68f9zc1fkb9ql84rvzn7g1hbykqrbvss8hjaq8x1r"; depends=[]; }; SRRS = derive2 { name="SRRS"; version="0.1.1"; sha256="0jv545a97q4pyl89lmhn3y0jhdzyq033mvx144x8lcgx59s7cyi3"; depends=[gtools tcltk2]; }; @@ -3426,24 +3484,26 @@ in with self; { SSN = derive2 { name="SSN"; version="1.1.12"; sha256="1c2dx7d9izd4z76pvsbbfb0r1a6w45x96mv4vb9h99yafcw380nv"; depends=[BH igraph lattice maptools MASS Matrix rgdal rgeos RSQLite sp]; }; SSRA = derive2 { name="SSRA"; version="0.1-0"; sha256="1d0lg2dz8vf1d63366s5apm0ygrsfxivbrsij907r244zj6i1c37"; depends=[shape stringr]; }; SSRMST = derive2 { name="SSRMST"; version="0.1.1"; sha256="15s6vcmk8a27yw3rlfkajby6qkizp4sfiyi63m7hc86svd15x4wg"; depends=[survival survRM2]; }; - SSrat = derive2 { name="SSrat"; version="1.0"; sha256="1qpsdfdngsgxx3mqgn4avl65w4v5v4jwsh1nnxzfn9iqi9mg4bhi"; depends=[plyr sna]; }; + SSrat = derive2 { name="SSrat"; version="1.1"; sha256="1mmwla7yqqldv0s5hqljq2k2qljdfhq97m5128gvf3iy7n2yjzgj"; depends=[plyr sna]; }; SSsimple = derive2 { name="SSsimple"; version="0.6.4"; sha256="0p7d4hx7mhn5myq8ajcij6hhg79rjxigk5v8z93yfdw4gjcb5wad"; depends=[mvtnorm]; }; STAND = derive2 { name="STAND"; version="2.0"; sha256="07wrpmvk0jjlghvrb37xyai48vgzj0fby8y09qdxsxdlgwqg1f3s"; depends=[survival]; }; STAR = derive2 { name="STAR"; version="0.3-7"; sha256="1g78j4iyh78li1jaa3zz5qv4p41cg0imhmvbfakd34l32ppih4ll"; depends=[codetools gss mgcv R2HTML survival]; }; - STARTS = derive2 { name="STARTS"; version="0.2-10"; sha256="16d578rgl13x29lbv95g7qrcf0lmxjcz8mxrrd5cb7405bl4a1rq"; depends=[CDM LAM sirt]; }; + STARTS = derive2 { name="STARTS"; version="0.3-24"; sha256="13963x27y81ahwnhzghq3wadlkkq8k8mga2ap2knx5p980fj1jb7"; depends=[CDM LAM sirt]; }; STARTdesign = derive2 { name="STARTdesign"; version="1.0"; sha256="1q61l3v8ishzax3ppy0pz4ky4l46472l6j36hjlsa8cl01ik1zjf"; depends=[Rcpp]; }; STB = derive2 { name="STB"; version="0.6.3.1"; sha256="0fj1cfxqhijpxl41z799zd7id95jsb84ylrbqzrd1jlp80plyw83"; depends=[Matrix VCA]; }; STEPCAM = derive2 { name="STEPCAM"; version="1.2"; sha256="03crbc7hag8w333j9c7k0q7zy7xmfid4lq773p74r55jmac5xpjf"; depends=[ade4 ape FD geometry gtools MASS vcd]; }; STI = derive2 { name="STI"; version="0.1"; sha256="1p408y9w2h4ljaq0bsw7vc1xghczjprf558cyg6994m0nv5fh4c4"; depends=[fitdistrplus zoo]; }; STMedianPolish = derive2 { name="STMedianPolish"; version="0.2"; sha256="0jzgcfhm09cccg2nwbvrmnkah1psbnmg26rc2n7lz26n4b20p3l2"; depends=[gstat maptools nabor reshape2 sp spacetime zoo]; }; STPGA = derive2 { name="STPGA"; version="4.0"; sha256="198h2wzhv5lnyqypn7s5lilywby2pq3zdx8vk4qd72bybfwwli2c"; depends=[]; }; + STV = derive2 { name="STV"; version="1.0.0"; sha256="034d9qnvgmk97ah7r9w2hvnw39f7mxs2ml6y8dad94p8phl52gfw"; depends=[]; }; SUE = derive2 { name="SUE"; version="1.0"; sha256="0akv724s84v2zixvwywj1ydfnfvcjnaabv6gm0601nsrh6ij1mi6"; depends=[]; }; SUMMER = derive2 { name="SUMMER"; version="0.1.0"; sha256="14dq64h931l8r4pfhdg3i8wabb08n1fnnp8ql1bmhl1z4dqbggfl"; depends=[classInt ggplot2 maptools RColorBrewer sp spdep survey survival]; }; SVMMaj = derive2 { name="SVMMaj"; version="0.2-8"; sha256="13d9v1l85md1v6qyfrdc3l36yanw5canskngjr1sh0hmyla182bz"; depends=[dplyr ggplot2 gridExtra kernlab reshape2 scales]; }; SVMMatch = derive2 { name="SVMMatch"; version="1.1"; sha256="1ykwrhlid4hs466xh3kv6y2qdhgk0jiglg0l3zwk5qlni6p26zc9"; depends=[Rcpp RcppArmadillo]; }; SWATmodel = derive2 { name="SWATmodel"; version="0.5.9"; sha256="1i48g9nbjfn30ppwyzyz3k181nscv4wx773l8mzfdwhx0nlv4kyj"; depends=[EcoHydRology]; }; SWMPr = derive2 { name="SWMPr"; version="2.3.0"; sha256="1z6gg8ih1m5nxm1kilpwxj4xvlbyqr67la7idrfa722y6f6264rf"; depends=[data_table dplyr ggmap ggplot2 gridExtra httr lattice maptools oce openair RColorBrewer reshape2 tictoc tidyr XML zoo]; }; - SYNCSA = derive2 { name="SYNCSA"; version="1.3.2"; sha256="1m057lhfaf0n35rs3sipia04qgkp04hv7wf7rvnr7bhzic9f4vg3"; depends=[FD mice vegan]; }; + SWMPrExtension = derive2 { name="SWMPrExtension"; version="0.3.12"; sha256="1l79576a4v7kdgnb3skmakbfgnxfr069dn60v31x1fjq75k2lklq"; depends=[broom dplyr EnvStats flextable ggplot2 ggthemes leaflet lubridate magrittr maptools officer RColorBrewer rgdal rgeos rlang scales sp stringr SWMPr tidyr]; }; + SYNCSA = derive2 { name="SYNCSA"; version="1.3.3"; sha256="1g00jzghvvhnj2npplh87bwbm479mwldskhard0vjlfmagbhjm8p"; depends=[FD permute RcppArmadillo vegan]; }; SafeBayes = derive2 { name="SafeBayes"; version="1.1"; sha256="09bhd3z9ia2mvpn1h0hil00j6cm4x9y9ymxc3gj8wd4ybdi3jqlm"; depends=[]; }; SafeQuant = derive2 { name="SafeQuant"; version="2.3.1"; sha256="0rgi0ij33sdvkpmjynfmsj0f29kl9l9ylsqckg5x4v49m6mzq1yh"; depends=[Biobase corrplot data_table epiR gplots limma optparse seqinr]; }; Sample_Size = derive2 { name="Sample.Size"; version="1.0"; sha256="1vfnb2gg3rax4sxd81xqznfvh300nv45nn7zjsyrdjyg1n3ym7nw"; depends=[]; }; @@ -3474,31 +3534,31 @@ in with self; { Segmentor3IsBack = derive2 { name="Segmentor3IsBack"; version="2.0"; sha256="0c7ag9svd1xlm60padg41gvz7qnbcp41kg3cz2dvi9hy2yrqw0qd"; depends=[]; }; Sejong = derive2 { name="Sejong"; version="0.01"; sha256="1d9gw42dbs74w7xi8r9bs6dhl23y16yxqzyhqqayvcm98q3l77nf"; depends=[]; }; SeleMix = derive2 { name="SeleMix"; version="1.0.1"; sha256="1qzy59wbjh8llm66l70xi0p3lv94iawh2h5vwa9sqy2ra5vmpaxk"; depends=[mvtnorm]; }; - Select = derive2 { name="Select"; version="1.2"; sha256="0ljlh7zj4r3izns47sa8bx17ll0ki6p02fpjxwghy1hz9k6ak9ir"; depends=[lattice latticeExtra Rsolnp]; }; + Select = derive2 { name="Select"; version="1.3"; sha256="0gl0rba9d2l3r70wnxlc3d9s8lcgxl9scsb27x4zid5a3y7n7mpw"; depends=[ade4 FD lattice latticeExtra Rsolnp]; }; SelvarMix = derive2 { name="SelvarMix"; version="1.2.1"; sha256="02d16ffw5syq0d3yiim9jgrjlz99n956zxp23idpsmq6lb2whq66"; depends=[glasso Rcpp RcppArmadillo Rmixmod]; }; - SemiCompRisks = derive2 { name="SemiCompRisks"; version="2.8"; sha256="1f4cpqjb737fz6iiadhdi1ansfi5wj1zl403b3xw7l20k4f39952"; depends=[MASS survival]; }; + SemiCompRisks = derive2 { name="SemiCompRisks"; version="3.0"; sha256="1f1rv48qpmgg0z25vmz48ziimj6bwnxlzf2k4i1xwb53qxxyysxw"; depends=[Formula MASS survival]; }; SemiMarkov = derive2 { name="SemiMarkov"; version="1.4.3"; sha256="1qfsy88bd07xk3gy2r7cjcs6fhx9889aqn1494d92msxmc6zvcz7"; depends=[MASS numDeriv Rsolnp]; }; - SemiPar = derive2 { name="SemiPar"; version="1.0-4.1"; sha256="05gnk4s0d6276rmnyyv6gy1wpkji3sw563n8l7hmi9qqa19ij22w"; depends=[cluster MASS nlme]; }; + SemiPar = derive2 { name="SemiPar"; version="1.0-4.2"; sha256="0pa3drpvclkw81ji5m1h5arj5c2rh03dnlff97cnnr1v5kvg1i4w"; depends=[cluster MASS nlme]; }; SemiParSampleSel = derive2 { name="SemiParSampleSel"; version="1.5"; sha256="0apbg8sddz2ab9170wvf7p6cgawvp4w13r97r5q7p3hx2hylb8sw"; depends=[CDVine copula gamlss_dist magic Matrix matrixStats mgcv mvtnorm trust VGAM]; }; SenSrivastava = derive2 { name="SenSrivastava"; version="2015.6.25"; sha256="0r4p6wafnfww07kq19lfcs96ncfi0qrl8n9ncp441ri9ajwj54qk"; depends=[]; }; SensMap = derive2 { name="SensMap"; version="0.6"; sha256="0j52aplvdlwwfswyrij0vv7zsdr015cn5931c6631rlps94gka0w"; depends=[doBy factoextra FactoMineR fields ggdendro ggplot2 glmulti lattice MCMCpack mgcv plotly shiny]; }; - SensMixed = derive2 { name="SensMixed"; version="2.0-10"; sha256="0r2lga40xr782n1viyxc4wn9gzgm7g2ick45pfnkgq6m60wx9rfh"; depends=[doBy ggplot2 Hmisc lme4 lmerTest plyr reshape2 shiny shinyBS xtable]; }; + SensMixed = derive2 { name="SensMixed"; version="2.1-0"; sha256="0ykg94amnm9clf8d3naap8fmv9qqc6j1q52wnb83zk7ry44dp7dh"; depends=[doBy ggplot2 Hmisc lme4 MASS plyr reshape2 shiny shinyBS xtable]; }; SensitivityCaseControl = derive2 { name="SensitivityCaseControl"; version="2.1"; sha256="00jqzqx7g0av9lw13is723gph486gb8ga0wgcmmzpmb24s5nya9z"; depends=[]; }; SensoMineR = derive2 { name="SensoMineR"; version="1.23"; sha256="0a1s2wrb86a0y2faxj5ax8fa6vfcclgg7bcff4j7jb40ilxnxhn4"; depends=[AlgDesign cluster FactoMineR ggplot2 gtools KernSmooth reshape2]; }; SensusR = derive2 { name="SensusR"; version="2.2.0"; sha256="0ahgy6mvlxfdavdarmfmb1ld1pykhbrjgg8mdh5q71b3a75vbp47"; depends=[ggmap ggplot2 jsonlite lubridate openssl plyr R_utils]; }; - SentimentAnalysis = derive2 { name="SentimentAnalysis"; version="1.3-0"; sha256="098w4kcd6xsgwi996plm06nmyg8f7sg9wjphymmfl29k5y2zyz4s"; depends=[ggplot2 glmnet mgcv moments ngramrr qdapDictionaries SnowballC spikeslab stringdist tm XML]; }; + SentimentAnalysis = derive2 { name="SentimentAnalysis"; version="1.3-2"; sha256="18vycj9vpb32610sn321sbwdnjldyjm9idjw9spggdzj7gsiwwk3"; depends=[ggplot2 glmnet mgcv moments ngramrr qdapDictionaries SnowballC spikeslab stringdist tm XML]; }; SeqAlloc = derive2 { name="SeqAlloc"; version="1.0"; sha256="04rhr3gb2p9i35a3x4k8m0lv42ncfqlhx6sf3bq8yihppwrag8x3"; depends=[]; }; - SeqBayesDesign = derive2 { name="SeqBayesDesign"; version="0.1.0"; sha256="0426v7lf7z0r8lc9clwnq6n977m27cd7l218i5dfssllkv17h88k"; depends=[MASS Rcpp]; }; SeqFeatR = derive2 { name="SeqFeatR"; version="0.2.6"; sha256="0y06am4q9cgf8cfycw9ym5qys0g99ks3cfxgk0mss34i5vhbfjfr"; depends=[ape Biostrings calibrate coda ggplot2 phangorn plotrix plyr qvalue R2jags scales tcltk2 widgetTools]; }; SeqGrapheR = derive2 { name="SeqGrapheR"; version="0.4.8.5"; sha256="041hlf64zbndz76r076pmym4dw4xl3fahryvpvjspw0sdlhmfm8c"; depends=[Biostrings cairoDevice gWidgets gWidgetsRGtk2 igraph rggobi]; }; + SeqKat = derive2 { name="SeqKat"; version="0.0.6"; sha256="0idxyn84rqsg26y6ml218g037qxrx9755ikasyn212qacc36in39"; depends=[doParallel foreach Rcpp]; }; SeqMADE = derive2 { name="SeqMADE"; version="1.0"; sha256="0nf1xjhk0kpmmzgcxycg3ccxvwq6gydjq7xq6n9m7k7v35v9v3qf"; depends=[MASS]; }; SequenceAnalysis = derive2 { name="SequenceAnalysis"; version="1.3"; sha256="0jrpq5ryw7rwkv99w0a5p3r0vj8nbzj6adlcsr84d9ffgxafmhif"; depends=[XML]; }; Sequential = derive2 { name="Sequential"; version="2.3.2"; sha256="01zvgvdj57js08krskahk1ng3wkv9iblmirslgrmllf4q18zwsdr"; depends=[]; }; SequentialDesign = derive2 { name="SequentialDesign"; version="1.0"; sha256="1gi37pixwbpy7358id1c75rckr352hs8vjs8sk8qgsr97pkm5xdq"; depends=[Sequential]; }; SetMethods = derive2 { name="SetMethods"; version="2.3"; sha256="10xzvr7xfv2vwa3byw4qb3v8gi8d36w9drjzqsxx52ffnjb95670"; depends=[betareg fmsb lattice QCA]; }; SetRank = derive2 { name="SetRank"; version="1.1.0"; sha256="0p7vwsw05s5hfw1mfh3fbm9nfzsymnxzrdjin7k21dx7asb618wy"; depends=[data_table igraph XML]; }; - SetTest = derive2 { name="SetTest"; version="0.1.0"; sha256="0b5lkdhaymi3vsx9acdn9jxvqwwsac9lbdr43c44c06gglqlvk47"; depends=[]; }; - Seurat = derive2 { name="Seurat"; version="2.2.1"; sha256="1sr82nf38hq07avrfn8vlrzjq7dfm4pcr8l1nh6mnglcql2bk9z2"; depends=[ape caret cowplot diffusionMap dplyr dtw FNN fpc gdata ggplot2 ggridges gplots gridExtra Hmisc ica igraph irlba lars MASS Matrix metap mixtools pbapply plotly ranger RColorBrewer Rcpp RcppEigen RcppProgress reshape2 ROCR Rtsne SDMTools stringr tclust tidyr tsne VGAM]; }; + SetTest = derive2 { name="SetTest"; version="0.2.0"; sha256="08wc6cbnannmwkncqhpcw6l0y7c1v7z3awk5j7fd853nszfmpbk0"; depends=[]; }; + Seurat = derive2 { name="Seurat"; version="2.3.0"; sha256="0kp3lw1s896zkjd6x2wp8qcg7wnm5b40g8vihps13f1m7j4nx7r0"; depends=[ape caret cluster cowplot diffusionMap doSNOW dplyr dtw fitdistrplus FNN foreach fpc gdata ggplot2 ggridges gplots gridExtra Hmisc ica igraph irlba lars lmtest MASS Matrix metap mixtools pbapply plotly png ranger RANN RColorBrewer Rcpp RcppEigen RcppProgress reshape2 ROCR Rtsne SDMTools stringr tclust tidyr tsne VGAM]; }; ShapeChange = derive2 { name="ShapeChange"; version="1.4"; sha256="1ch7avx8mxjk8vrp17inaihmbsv968wflyk1n4fbjvacbl24vn2b"; depends=[coneproj quadprog]; }; ShapePattern = derive2 { name="ShapePattern"; version="1.0.1"; sha256="18jzs0sq21qhldm86mgx7yb9kl473vv1aljl9hm4560xy5pd5fnb"; depends=[rgdal rgeos sp]; }; ShapeSelectForest = derive2 { name="ShapeSelectForest"; version="1.3"; sha256="1vvfl1ldrn0l9w38hx0hhszvj5a2dpmfl6ljzw7f0ji181lrx96m"; depends=[coneproj raster rgdal]; }; @@ -3506,7 +3566,7 @@ in with self; { ShinyImage = derive2 { name="ShinyImage"; version="0.1.0"; sha256="0nhsaq6i9lr8gqpdkahw3qr0c0cb0qwc0nqpk1ism21l6zg6ahc9"; depends=[EBImage R6 shiny shinyjs]; }; ShinyItemAnalysis = derive2 { name="ShinyItemAnalysis"; version="1.2.6"; sha256="126rvy7pra60fz7pmc6n9liahhwrq313gbqrkvcpcwdv807l39c8"; depends=[corrplot CTT data_table deltaPlotR difNLR difR DT ggplot2 gridExtra knitr latticeExtra ltm mirt moments msm nnet plotly psych psychometric reshape2 rmarkdown shiny shinyjs stringr WrightMap xtable]; }; ShinyTester = derive2 { name="ShinyTester"; version="0.1.0"; sha256="0wm4rl2p8ggw6v2chk9b6ygh5y8p8cwzbyra0nr0qr2ka97didp8"; depends=[dplyr purrr readr stringr tidyr visNetwork]; }; - ShortForm = derive2 { name="ShortForm"; version="0.3.0"; sha256="03yxn535yv11l5ckw26jd0maf2k0xpvichid5vwn0vb1f6ryk1xn"; depends=[lavaan MplusAutomation]; }; + ShortForm = derive2 { name="ShortForm"; version="0.4.0"; sha256="0fvv42n2dsl4602scad74w11vj1id9dzsj5szv7xnbgv8lzaawjm"; depends=[lavaan MplusAutomation]; }; ShrinkCovMat = derive2 { name="ShrinkCovMat"; version="1.2.0"; sha256="1ybd8vm69y50lj2mkmcdyplxb689xfg4spbl129v8hlvhw69mzmy"; depends=[]; }; SiER = derive2 { name="SiER"; version="0.1.0"; sha256="1ng6vnh30z6z1nvclsdzc9gdbrsrb2kqdqvs6fwm0j1zqlk12x0y"; depends=[]; }; SiMRiv = derive2 { name="SiMRiv"; version="1.0.3"; sha256="1kzvbzmqcxs0sh23nmjd39zkg68kbnc5djpbjhqhn55qjdfx5776"; depends=[mco raster rgdal sp]; }; @@ -3529,9 +3589,11 @@ in with self; { SimRAD = derive2 { name="SimRAD"; version="0.96"; sha256="0ivvd3k04v1akbblxcjhlyc315z3ig7wjs0g3b37lvlfp54ppbrg"; depends=[Biostrings ShortRead zlibbioc]; }; SimRVPedigree = derive2 { name="SimRVPedigree"; version="0.1.0"; sha256="1krdz4gxnqxj3wabc5hn7ayfqdfmpgg66zj09b3jnngcdaxkjlwb"; depends=[dplyr kinship2]; }; SimReg = derive2 { name="SimReg"; version="3.0"; sha256="188q399xcrvjw7y7lf3hfbb7x0m0hc4zaf9i1w2c4xzswmvljd8r"; depends=[ontologyIndex ontologyPlot ontologySimilarity Rcpp]; }; + SimRepeat = derive2 { name="SimRepeat"; version="0.1.0"; sha256="1vq82wlnas0jkl8hlj7dnnbn4y1a56lmszs4w7wya7acri92gkqm"; depends=[BB ggplot2 MASS Matrix nleqslv SimCorrMix SimMultiCorrData triangle VGAM]; }; SimSCRPiecewise = derive2 { name="SimSCRPiecewise"; version="0.1.1"; sha256="0mhlx9m5db8a40wf275qh59345676m8bpjjmyx1v22f6m9p3b2n4"; depends=[]; }; SimSeq = derive2 { name="SimSeq"; version="1.4.0"; sha256="068gg484w07qb4wajik2s3z79xfj0jg5l4pz69267dxi5kzd9fas"; depends=[fdrtool]; }; SimTimeVar = derive2 { name="SimTimeVar"; version="1.0.0"; sha256="1x0lkgqwx1vz1gbyvy0hx20n638n30j0dny1iz5vs0cvviq3cdv8"; depends=[car corpcor ICC metafor miscTools mvtnorm plyr psych]; }; + SimilaR = derive2 { name="SimilaR"; version="1.0.1"; sha256="1icm34g15c616q5ckf1d664kk6fchjbn4mw2d0bjshqsvlvn89ji"; depends=[BH Rcpp stringi]; }; SimilarityMeasures = derive2 { name="SimilarityMeasures"; version="1.4"; sha256="1w4klcln4hy9vcik9csg7b3b8kk4raxgckwfrhqg089d80xbqsxj"; depends=[]; }; Simile = derive2 { name="Simile"; version="1.3.3"; sha256="1izyjp18m1inac3svkf59z3lddrv44m7pdkhisgkr987xs8gdch4"; depends=[]; }; SimpleTable = derive2 { name="SimpleTable"; version="0.1-2"; sha256="1rkybrp7zlb7cj37799npss1ldic0yf519q5l7a6ikal4yl1afyb"; depends=[hdrcde locfit MCMCpack]; }; @@ -3540,7 +3602,7 @@ in with self; { SimuChemPC = derive2 { name="SimuChemPC"; version="1.3"; sha256="06sxknaykikcgbw7qbbw1risg0sbaisb68vhfd7cl6sg0327dznk"; depends=[rcdk]; }; SimultAnR = derive2 { name="SimultAnR"; version="1.1"; sha256="0jvmxwmbnx14h27b576dg9mw3c2z0w3m82f51f25zd1darcl06bj"; depends=[]; }; SinIW = derive2 { name="SinIW"; version="0.2"; sha256="1z7rcjy0i09a9hjpjj1x8i46lv042l20lvb6b0pnsky2sx3v78pd"; depends=[fdrtool pracma]; }; - SixSigma = derive2 { name="SixSigma"; version="0.9-51"; sha256="0101zdz2dqlazg7k8li762g58z0xds76s8nzjjfb3y2j5nqkbjga"; depends=[e1071 ggplot2 lattice nortest qcc reshape2 scales testthat xtable]; }; + SixSigma = derive2 { name="SixSigma"; version="0.9-52"; sha256="07s4an2az2pgqhq9c08jrf6b95nrs1b3r1092d53n1ps8wbdmbln"; depends=[e1071 ggplot2 lattice nortest qcc reshape2 scales testthat xtable]; }; SizeEstimation = derive2 { name="SizeEstimation"; version="1.1.1"; sha256="1rz57y76hzp880511kzm7nhxf201n0dr7ccip6slrjz784dl7s27"; depends=[MCMCpack msm]; }; SkewHyperbolic = derive2 { name="SkewHyperbolic"; version="0.3-2"; sha256="10vilra5z884xinqkvk7ryi4nsq5zxlyn5qh23lsajba3b3qwhaw"; depends=[DistributionUtils GeneralizedHyperbolic RUnit]; }; Skillings_Mack = derive2 { name="Skillings.Mack"; version="1.10"; sha256="0zxqiw87avw2rb2acj7mvpyfkf7iwnkshg73ib74y5ml9awmg2mw"; depends=[MASS matrixcalc]; }; @@ -3548,6 +3610,7 @@ in with self; { SkyWatchr = derive2 { name="SkyWatchr"; version="0.8-2"; sha256="0if44d79j2hlxdccn3jd7lrfbhrr09rfhfgds132syxprwkcb2mr"; depends=[htmlTable httr sp]; }; Sleuth2 = derive2 { name="Sleuth2"; version="2.0-4"; sha256="18mh1svmb96hw3rjmgxlwzs7kdcvjkxf4zm8k4w0sxz94ks062i7"; depends=[]; }; Sleuth3 = derive2 { name="Sleuth3"; version="1.0-2"; sha256="0b4g7j8a204wyvh0q9n1l4zrl9rk7ibyfijd49mjjdyg9zz4kbna"; depends=[]; }; + SmartEDA = derive2 { name="SmartEDA"; version="0.1.0"; sha256="1wxj71fa91q2nxnl8l5iikgw6bqwphp8ymcnqisll1kp1w5f2g22"; depends=[ggplot2 gridExtra ISLR rmarkdown scales]; }; SmartSVA = derive2 { name="SmartSVA"; version="0.1.3"; sha256="10a8s2znsg8ywqkq9fsxiyqfsprrx33pqissazp2vmabs11mg4np"; depends=[isva Rcpp RcppEigen RSpectra sva]; }; SmartSifter = derive2 { name="SmartSifter"; version="0.1.0"; sha256="16rzma87k27qg6qy39mzywdj8pzkp7r9q7bpqyikazp3fk2nmfri"; depends=[mvtnorm rootSolve]; }; SmarterPoland = derive2 { name="SmarterPoland"; version="1.7"; sha256="03vs6hcd96va9kfhl2yq77alnm33j1dxy79kgrx17hlijsy65qqv"; depends=[ggplot2 htmltools httr jsonlite rjson]; }; @@ -3556,6 +3619,7 @@ in with self; { SmoothHazard = derive2 { name="SmoothHazard"; version="1.4.1"; sha256="147wjxgxnijpmixrfyl8kd4scz2w1xb8dcwvpr60zg32nv22g17r"; depends=[lava mvtnorm prodlim]; }; SmoothWin = derive2 { name="SmoothWin"; version="1.0.0"; sha256="19yd3gnanv8q8ab0x8ds61rznm5w71dri0liknylikiqgbqwxrcn"; depends=[msgps]; }; SnakeCharmR = derive2 { name="SnakeCharmR"; version="1.0.7"; sha256="1i8g0p51mp0j46434zzhmijwwk1v6my7rdw8j41ac3b4as3g0c73"; depends=[jsonlite Rcpp stringr]; }; + SnakesAndLaddersAnalysis = derive2 { name="SnakesAndLaddersAnalysis"; version="2.1.0"; sha256="0h3664h6d32q201qfyv9y2gg4fhg3azdpwpmx4qfbc10hsc1ghl9"; depends=[]; }; SnowballC = derive2 { name="SnowballC"; version="0.5.1"; sha256="0kbg33hy6m2hv9jspyx6naqmk2q6h2zmvvczjmkwqvlhzlj0c5s4"; depends=[]; }; SoDA = derive2 { name="SoDA"; version="1.0-6"; sha256="0sh2dan4ga2k14rirnkvgzsvbksx1k4ika5gkf5cy247rjkqnpj0"; depends=[]; }; SobolSequence = derive2 { name="SobolSequence"; version="1.0"; sha256="1vmp5jix3zvasvdirv8m88jc0cd8f34b4m1jvhs8g3v9lk8pxrrr"; depends=[Rcpp]; }; @@ -3589,7 +3653,7 @@ in with self; { SparseM = derive2 { name="SparseM"; version="1.77"; sha256="0p6ljma2h12cq1xmy0cxb48ih8dhxxbnwkqzvx3cckxf2kprycm9"; depends=[]; }; SparseTSCGM = derive2 { name="SparseTSCGM"; version="2.5"; sha256="004hbk5fdd5b5hdvg25wl1908pfya26brm2pz00zypfvis99lps3"; depends=[abind flare glasso longitudinal MASS mvtnorm network QUIC]; }; SpatEntropy = derive2 { name="SpatEntropy"; version="0.1.0"; sha256="0nk399anjhsdki9cra650ynk6sa0366495470sawxcfs3vxmlzrl"; depends=[spatstat]; }; - SpatMCA = derive2 { name="SpatMCA"; version="1.0.0.2"; sha256="1xm29ybbdxspj2ylkkd9qh17sizz1gkc3l34y3d0ivmxz64vn6pj"; depends=[fields MASS Rcpp RcppArmadillo RcppParallel]; }; + SpatMCA = derive2 { name="SpatMCA"; version="1.0.1.0"; sha256="1sjrm1md4lmhyq1yw3np4llkgdskw3mk667jr0k3isjmr6z88gxa"; depends=[fields MASS Rcpp RcppArmadillo RcppParallel]; }; SpatPCA = derive2 { name="SpatPCA"; version="1.2.0.0"; sha256="12b9ijbzzkhwrs7q0z5srawiskr3gdjvgdsrmsn4dhyqdzdbi8b6"; depends=[Rcpp RcppArmadillo RcppParallel]; }; SpatialAcc = derive2 { name="SpatialAcc"; version="0.1-2"; sha256="1nyxxwvlnhz78pw31dqijp1crlar5nak5934s4h0a4sajv9syif2"; depends=[]; }; SpatialBall = derive2 { name="SpatialBall"; version="0.1.0"; sha256="09iy1smfqnb0rd2s9a1wqgscb1plwcwwph6a8215l4zrs6svszv2"; depends=[dplyr ggplot2 hexbin lubridate RColorBrewer]; }; @@ -3598,7 +3662,7 @@ in with self; { SpatialExtremes = derive2 { name="SpatialExtremes"; version="2.0-6"; sha256="14clsb7w7p39ak00127lfa7irl67vqydvafkj8vs8qn9i3kaj6iz"; depends=[fields maps]; }; SpatialFloor = derive2 { name="SpatialFloor"; version="1.0.3"; sha256="14nbl0kb4c46kxvw900d972n78x6q0y9039l6p4r9w2i9ir7g1yh"; depends=[fields reshape2]; }; SpatialNP = derive2 { name="SpatialNP"; version="1.1-2"; sha256="048zzyy3hav8qg0zad2fsv5z1avdppwwdcv0rc6j635wzhdmsl1j"; depends=[]; }; - SpatialPack = derive2 { name="SpatialPack"; version="0.2-3"; sha256="1gs0x3wj3hj663m6kszwhy3ibcx0lrslr127miy1rhz8683ij71c"; depends=[]; }; + SpatialPack = derive2 { name="SpatialPack"; version="0.3"; sha256="12mx62drwqx351x4jfvv87rxr28ggz7iw83firkzr5xwfwfgr02c"; depends=[]; }; SpatialPosition = derive2 { name="SpatialPosition"; version="1.2.0"; sha256="140fg3bjj7383nrdbgnk9lccj4yjq65rkprqpmf4q0mwbc89mmqc"; depends=[raster rgdal rgeos sp]; }; SpatialTools = derive2 { name="SpatialTools"; version="1.0.2"; sha256="0n8l4k0dm9gwirhxwrajv5gx502px9qzlqi6skzx0k32hmymnazh"; depends=[Rcpp RcppArmadillo spBayes]; }; SpatialVx = derive2 { name="SpatialVx"; version="0.6-2"; sha256="12kwwhxlvlkss1rg9ipaw97l5kw50m7crpcpv1y420sf14873j7r"; depends=[boot CircStats distillery fastcluster fields maps smatr smoothie spatstat turboEM waveslim]; }; @@ -3612,7 +3676,7 @@ in with self; { SportsAnalytics = derive2 { name="SportsAnalytics"; version="0.2"; sha256="1vb080ak1mfvr6d0q9i3r8hd547ba80bavjdcri0gclqqcjf1ach"; depends=[]; }; SqlRender = derive2 { name="SqlRender"; version="1.4.8"; sha256="08q9h6aca7vzgy1ipvghvrspdvmzlgmvhjgibcn38lfyl09xyfas"; depends=[rJava]; }; StAMPP = derive2 { name="StAMPP"; version="1.5.1"; sha256="0yyssscx3l4csban66gb4q35h37gf7pqvvycfsy56n96pnnlrgkf"; depends=[adegenet doParallel foreach pegas]; }; - StMoMo = derive2 { name="StMoMo"; version="0.4.0"; sha256="0zkcp19a76dm29fba5r96dxly709sic2k5p9hzc70cvwjhwhfr7v"; depends=[fanplot fields forecast gnm MASS RColorBrewer reshape2 rootSolve]; }; + StMoMo = derive2 { name="StMoMo"; version="0.4.1"; sha256="1c4v2gjipq1y4crc6bqvz2x5c02bl10mh9jacg8dqb2dffsh5y44"; depends=[fanplot fields forecast gnm MASS RColorBrewer reshape2 rootSolve]; }; StMoSim = derive2 { name="StMoSim"; version="3.0"; sha256="18mdgpn0x6338zzvc7nwccz6ypqmlpv7pzcy5fwx5y2wfkmdp4rm"; depends=[Rcpp RcppParallel]; }; StVAR = derive2 { name="StVAR"; version="1.1"; sha256="0wz5f5i9927fs1s8yczwqs022k912220m28l1sv5f0r081iv656i"; depends=[ADGofTest matlab MCMCpack numDeriv]; }; StableEstim = derive2 { name="StableEstim"; version="2.1"; sha256="0agi3bfp1xy5pfxxb9ib6xn434agmplgn7kg47nhbh47vf57vang"; depends=[fBasics MASS Matrix numDeriv stabledist testthat xtable]; }; @@ -3622,7 +3686,7 @@ in with self; { StanHeaders = derive2 { name="StanHeaders"; version="2.17.2"; sha256="11fcc59z63rkgk6pp5vhb5avjlbhbjs2v5mn496ai9jms4223ivc"; depends=[]; }; StandardizeText = derive2 { name="StandardizeText"; version="1.0"; sha256="0s267k2b109pcdiyd26gm4ag5afikrnnb55d3cs6g2fvzp744hfp"; depends=[]; }; Stat2Data = derive2 { name="Stat2Data"; version="1.6"; sha256="0pk68ffc6ffpddfpf9wi8ch39h6k3r80kldld3z5pnql18rc8nvx"; depends=[]; }; - StatCharrms = derive2 { name="StatCharrms"; version="0.90.7"; sha256="082pwqn08b9ij0vmc68sf43fin2hp16mlpi3d0i9ynpda9v22nr8"; depends=[cairoDevice car clinfun coxme gWidgets gWidgetsRGtk2 lattice multcomp nlme R2HTML RGtk2 RSCABS survival]; }; + StatCharrms = derive2 { name="StatCharrms"; version="0.90.9"; sha256="1r11zzfzhps234nzkpxw0qw0phjcdww8dkh2l6z6qkvc4495x0zh"; depends=[cairoDevice car clinfun coxme gWidgets gWidgetsRGtk2 lattice multcomp nlme R2HTML RGtk2 RSCABS survival]; }; StatDA = derive2 { name="StatDA"; version="1.6.9"; sha256="01bjygis14b3yfsfkjbvy0zlhjxysjf46cfcw8p4a4lwik3qp03b"; depends=[cluster e1071 geoR MASS MBA mgcv rgl robustbase sgeostat xtable]; }; StatDataML = derive2 { name="StatDataML"; version="1.0-26"; sha256="1lcckapbhqdbg6alnhm2yls66lnkxnxamdlzx6pbfqv1dhsy36gf"; depends=[XML]; }; StatMatch = derive2 { name="StatMatch"; version="1.2.5"; sha256="1162yqqrxkbpchdxdibpk5ccv55krvh9j150jgr047zzghr9ansa"; depends=[clue lpSolve proxy RANN survey]; }; @@ -3650,7 +3714,7 @@ in with self; { StructFDR = derive2 { name="StructFDR"; version="1.2"; sha256="00h3mx7kf01snngkcarhyidqiycvnjhcs81x3kprgp6597md7ph1"; depends=[ape cluster dirmult matrixStats nlme]; }; SubCultCon = derive2 { name="SubCultCon"; version="1.0"; sha256="08q6k4nsv3gl5qk87s87smdg047yc2a4i7kg0fp08i7q7h62jkvz"; depends=[]; }; SubLasso = derive2 { name="SubLasso"; version="1.0"; sha256="12m7ynlqhikjhavd12bhsd04s9cpv8aq5xgm875i10mb3ldpd1bd"; depends=[glmnet gplots psych]; }; - SubTite = derive2 { name="SubTite"; version="2.0.1"; sha256="1wmsks2dn3lv2m818g57115aqi821bs6ik94hx75knkfvw1835ys"; depends=[Rcpp RcppArmadillo]; }; + SubTite = derive2 { name="SubTite"; version="2.0.3"; sha256="1i95f3x1nkhx9kqzxwvi15x6yq7mcdihzjxh60la6jvq5nscfi3l"; depends=[Rcpp RcppArmadillo]; }; SubVis = derive2 { name="SubVis"; version="2.0.2"; sha256="1nb3zgm6i5lwfwdrn8mk3wkg8a4ldfvs27ai8v46l4316qc1fa9p"; depends=[Biostrings shiny]; }; SubgrpID = derive2 { name="SubgrpID"; version="0.11"; sha256="1by23gdkbls7l5xa9nl055nbm0d3138pmfmasqmcy42h62wf7dw6"; depends=[AIM ggplot2 glmnet Matrix rpart survival]; }; SubpathwayGMir = derive2 { name="SubpathwayGMir"; version="1.0"; sha256="1rw94idhbnaszr2xv1wgnjcxlnxkml912pvmqh2a1nqpwca5mscy"; depends=[igraph XML]; }; @@ -3660,9 +3724,10 @@ in with self; { SunterSampling = derive2 { name="SunterSampling"; version="1.0.1"; sha256="0qfld3j8xlpgp7c58zqw6gzm38m4d740lvdj5vmcflfcc6ja98sf"; depends=[]; }; SuperExactTest = derive2 { name="SuperExactTest"; version="1.0.0"; sha256="184s0pnwv9irqjlv24svfz3ami559ln03wjknyj67pwi4pfbzz87"; depends=[]; }; SuperGauss = derive2 { name="SuperGauss"; version="1.0"; sha256="1yqskaz4zsx87mcb9p7081h2lilaiwa3213yxlkyihyans7gnmp8"; depends=[fftw Rcpp RcppEigen]; }; - SuperLearner = derive2 { name="SuperLearner"; version="2.0-22"; sha256="1yajqqsxfrp9ybaa8ffwdrbwm3rfy5pgp6ma1ak43qg3plclllyr"; depends=[cvAUC nnls]; }; + SuperLearner = derive2 { name="SuperLearner"; version="2.0-23"; sha256="04bsgxdczw5gr8mkyxgzrsawv2zfcab5jd85azac3m2n08402v44"; depends=[cvAUC nnls]; }; SuperRanker = derive2 { name="SuperRanker"; version="1.1.0"; sha256="19cfz89557ygf5dvvqykmxcr72sfa0s2d37pplp6iwbhkl4wfw04"; depends=[prodlim Rcpp]; }; SuppDists = derive2 { name="SuppDists"; version="1.1-9.4"; sha256="1ffx8wigqqvz2pnh06jjc0fnf4vq9z2rhwk2y3f9aszn18ap3dgw"; depends=[]; }; + SurfaceTortoise = derive2 { name="SurfaceTortoise"; version="0.1.0"; sha256="0cw2nsqc9dx36svb49pqkmrxwk5hhbih206mwwkzfyavswxd2lpv"; depends=[gstat gtools raster rgdal rgeos sp]; }; Surrogate = derive2 { name="Surrogate"; version="0.6"; sha256="18cqcnzf64wk33qshsamija0r9xpnca0w2a8qz1ikj9r21vabhhw"; depends=[lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rgl rms survival]; }; SurrogateTest = derive2 { name="SurrogateTest"; version="1.0"; sha256="0dw8ic2rskwhj9f013q0j5my7qfsqihfis93frrlz4qag68jddqn"; depends=[survival]; }; SurvCorr = derive2 { name="SurvCorr"; version="1.0"; sha256="01rqdl503q1qnkn49iqnsjzis6azdsfi6s2hjky5k2zd6c9g18k5"; depends=[fields survival]; }; @@ -3672,19 +3737,19 @@ in with self; { SurvRegCensCov = derive2 { name="SurvRegCensCov"; version="1.4"; sha256="0ipr7lajnrklk963lrlgx946l6r191q3bfif4njkdmw0x797nzm2"; depends=[numDeriv survival]; }; Survgini = derive2 { name="Survgini"; version="1.0"; sha256="1gxkdv2j1njbgnwb52vyhz7p2lrcg3hp6sry3kyhp4wkvf6gnhxi"; depends=[survival]; }; SvyNom = derive2 { name="SvyNom"; version="1.1"; sha256="1jym2x6nd9a3y7nk5hflqpy54gs67y4sqqspkvkalf5l2cc64did"; depends=[Hmisc rms survey survival]; }; - SwarmSVM = derive2 { name="SwarmSVM"; version="0.1-2"; sha256="1997nbczgf5xkvj257fa211wxl85lq4jpybjl2q4hajn05ahq7yp"; depends=[BBmisc checkmate e1071 kernlab LiblineaR Matrix SparseM]; }; + SwarmSVM = derive2 { name="SwarmSVM"; version="0.1-4"; sha256="1b0h1jfywsrfdj8dkbnlzvh7654rycagxij9jbzb65g6swss6ajx"; depends=[BBmisc checkmate e1071 kernlab LiblineaR Matrix SparseM]; }; SweaveListingUtils = derive2 { name="SweaveListingUtils"; version="0.7.7"; sha256="04yxhphf069y29b40i34kr4hvlcv8kgr6kqc2vdz2a40564fdsjb"; depends=[startupmsg]; }; SwissAir = derive2 { name="SwissAir"; version="1.1.4"; sha256="1avc32q7nbwjkcbml7z05car6khv1ghcz3miw0krm8i53w032c6f"; depends=[]; }; SyNet = derive2 { name="SyNet"; version="2.0"; sha256="0mb9dscddkvmkf7l3bbcy4dlfmrvvy588vxdqy5dr783bpa5dkiw"; depends=[tkrplot]; }; SymTS = derive2 { name="SymTS"; version="1.0"; sha256="17vhm00zd9yxl6li36bsfkm4rsizjsm93ibrzgqnkl72sqmmlwfi"; depends=[]; }; - SympluR = derive2 { name="SympluR"; version="0.1.0"; sha256="11ni1x2k24b8g62gga0wvfxhjjf0pm4bir8sjspk97sii4l19037"; depends=[httr jsonlite plyr]; }; + SympluR = derive2 { name="SympluR"; version="0.3.0"; sha256="0a3irbk5bh3af8rv4l4sh3ymj3icyqjv5akzmx6rrp6pr3mgq6c6"; depends=[httr jsonlite plyr readr]; }; SyncMove = derive2 { name="SyncMove"; version="0.1-0"; sha256="1jlnsj5v8y5pijfkww7ng7nkwvj93naw29wcxxj130ww5qk7qk1z"; depends=[]; }; SyncRNG = derive2 { name="SyncRNG"; version="1.3.0"; sha256="0sywfmmy6mq6qsxkxjc67665snn1jds01j3h7ni1200igja139g2"; depends=[]; }; SynchWave = derive2 { name="SynchWave"; version="1.1.1"; sha256="127hllvig8kcs9gr2q14crswzhacv6v2s4zrgj50qdyprj14is18"; depends=[fields]; }; SynergizeR = derive2 { name="SynergizeR"; version="0.2"; sha256="0z32ylrjjvp8kr6lghhg57yq1laf9r0h8l3adysvis8bbpz2q2sj"; depends=[RCurl RJSONIO]; }; Synth = derive2 { name="Synth"; version="1.1-5"; sha256="1cfvh91nz6skjk8jv04fhwv3ga9kcsfgq3mdy8lx75jkx16zr0pk"; depends=[kernlab optimx]; }; T2EQ = derive2 { name="T2EQ"; version="1.1"; sha256="1skkkryw63pfx1xslia1lczb2psja6v6hcbph4isdcksb4l4pcig"; depends=[]; }; - TAM = derive2 { name="TAM"; version="2.9-35"; sha256="0n49g642xn3c82843l03rhksjbdq81bibj084aihw1nnby1l67k4"; depends=[CDM coda MASS mvtnorm Rcpp RcppArmadillo sfsmisc]; }; + TAM = derive2 { name="TAM"; version="2.10-24"; sha256="1ax7b7q4slwcjamapbmnaaahrwdhrcbasjjgycdk5d7gzrzyygnx"; depends=[CDM coda MASS mvtnorm Rcpp RcppArmadillo sfsmisc]; }; TANDEM = derive2 { name="TANDEM"; version="1.0.2"; sha256="1h6m6aq2b5m9gdy4nck4dxv75gv50pfdhxx8xifgyv0d7n8czabq"; depends=[glmnet Matrix]; }; TANOVA = derive2 { name="TANOVA"; version="1.0.0"; sha256="0c2mrahchwagisrkjl5l1s0mv0ny80kngq8dz0fjj9lwxwqwvwa5"; depends=[MASS]; }; TAQMNGR = derive2 { name="TAQMNGR"; version="2016.12-1"; sha256="1b3v30zi6ssac866grhgki2bpzbk06pd8vrfya3zcc5anry699bm"; depends=[Rcpp]; }; @@ -3695,7 +3760,6 @@ in with self; { TCGA2STAT = derive2 { name="TCGA2STAT"; version="1.2"; sha256="15a5lh0nrdcxdwj7wj5m9rsvk1ygpp6wdjb4swilk91rb1lblikv"; depends=[CNTools XML]; }; TCGAretriever = derive2 { name="TCGAretriever"; version="1.3"; sha256="0mi8j7k2b1sx75ka8ympydqpk8jqp8wz8dyf4vk4776fra7bq24p"; depends=[httr]; }; TCIApathfinder = derive2 { name="TCIApathfinder"; version="1.0.2"; sha256="1fgjmz297jckdb0xsly1scq5n8y8awfgdkr4yfml4lim2mkdsigx"; depends=[httr jsonlite]; }; - TDA = derive2 { name="TDA"; version="1.6"; sha256="1i0jgj72rpxn7icgl5f43c7lyq4jghmz4r9jn7bxa5kbavc8asy3"; depends=[BH FNN igraph Rcpp RcppEigen scales]; }; TDAmapper = derive2 { name="TDAmapper"; version="1.0"; sha256="0cxgr2888v8azgdr3sg4vlcdyivkrxkk6dsp1ahv4frrwvg2z09k"; depends=[]; }; TDCor = derive2 { name="TDCor"; version="0.1-2"; sha256="18085prcwhl5w717f1f7jcqskw2jvigvjjs2l5y6106ibiam6hxx"; depends=[deSolve]; }; TDD = derive2 { name="TDD"; version="0.4"; sha256="193y8brybkjsajrbnlx1sdnw1wyyn9rhlm5wvp4aamqhvi8z13vn"; depends=[pracma RSEIS signal]; }; @@ -3712,7 +3776,7 @@ in with self; { TFDEA = derive2 { name="TFDEA"; version="0.9.8.3"; sha256="0qg4nhlqqj7hc8lg732zz8klbbp3yksnq8q8n4ml3jz8gadrpyj7"; depends=[lpSolveAPI]; }; TFMPvalue = derive2 { name="TFMPvalue"; version="0.0.6"; sha256="1892jmgqywm0jp5l5k88brp4h8szkbi9bxi0v1jni1929qnsmqyf"; depends=[Rcpp]; }; TFX = derive2 { name="TFX"; version="0.1.0"; sha256="0xrjdbvg0ng4i0s8ql1pfyma10x4n045spilkb05750677r5j44p"; depends=[XML]; }; - TFisher = derive2 { name="TFisher"; version="0.1.0"; sha256="1fvqgy9djhcyrnvvbb3r4p7p3206qsm6yrnv444x48gmadl3mfym"; depends=[mvtnorm sn]; }; + TFisher = derive2 { name="TFisher"; version="0.2.0"; sha256="0vz74ww1lf1prfwz74hfsi3a8nzq8ss7aqjr85c1d87vss2796xx"; depends=[Matrix mvtnorm sn]; }; TH_data = derive2 { name="TH.data"; version="1.0-8"; sha256="17csnwyk2f3d47nghkfy9wly5kff8zhdcfwfml7509hjrjgi13s7"; depends=[MASS survival]; }; TIMP = derive2 { name="TIMP"; version="1.13.0"; sha256="0b6g2afwjz2m7bnfhx1pjmq6x1ghjxgrwi6hz1l867qa4i2yx5hx"; depends=[colorspace deSolve fields gclus gplots minpack_lm nnls]; }; TITAN2 = derive2 { name="TITAN2"; version="2.1"; sha256="0cxcgkf776411ln5wbfdyjxa42jw473vcq1kns6k6p8dpm1y91c2"; depends=[]; }; @@ -3721,12 +3785,12 @@ in with self; { TLBC = derive2 { name="TLBC"; version="1.0"; sha256="08w187akbhfbz6nrrf7avf02lrhgj7bbrjmim9gkh4wlbjhzvw67"; depends=[caret HMM randomForest signal stringr]; }; TLMoments = derive2 { name="TLMoments"; version="0.7.2.1"; sha256="1xgkbdnh79dj54jg5kf0c5kwykcvjaf4y16yyqf0vcc7aand6a3y"; depends=[hypergeo Rcpp]; }; TLdating = derive2 { name="TLdating"; version="0.1.3"; sha256="12lmakk1zd6wqh1318pnl14i7km2hynjn4ymchfjr2bwmp45c1ra"; depends=[gplots Luminescence]; }; - TMB = derive2 { name="TMB"; version="1.7.12"; sha256="06gky76x5bc95l22ygnnamgdym7ysnqg42fa213ic9ws2rjv40ni"; depends=[Matrix RcppEigen]; }; + TMB = derive2 { name="TMB"; version="1.7.13"; sha256="1cbm8vgjfd00678h011jzf0zjkvbv427nkp0924g2xmiai6c15xc"; depends=[Matrix RcppEigen]; }; TMDb = derive2 { name="TMDb"; version="1.0"; sha256="0bbcmsv7b3vvskhdjww03gbcgql44vsvyjz2fajy9w2vgkr6ga90"; depends=[httr jsonlite]; }; TNC = derive2 { name="TNC"; version="0.1.0"; sha256="0639wvylmk9mapvmz79ij65g1phv3ylc683awi4pgaf9yfwlmjkn"; depends=[]; }; TOC = derive2 { name="TOC"; version="0.0-4"; sha256="1c16d4wrzir6v3c323sck6r9yz6mv1a70xamlj5ha1ydmfixcza9"; depends=[bit raster rgdal]; }; - TOSTER = derive2 { name="TOSTER"; version="0.3"; sha256="0yjvxb2a2vx1zjg8sqsbz5p1qpnv6kbxrnkz76m08s3hn6ql4jpx"; depends=[ggplot2 jmvcore R6]; }; - TP_idm = derive2 { name="TP.idm"; version="1.3"; sha256="1j1s48342kg2lvydfy0250lyyzchj9qr6qi7d4rwy5xpvx8sy2b0"; depends=[]; }; + TOSTER = derive2 { name="TOSTER"; version="0.3.2"; sha256="1sfb01cvm9h3gd2x3bs8014czlgbnnwl5gy4frknz3b9qyazi2cy"; depends=[ggplot2 jmvcore R6]; }; + TP_idm = derive2 { name="TP.idm"; version="1.5"; sha256="07rxn0mpar3p6blg8fd3kbvdngyz9h9n0r0lcljnfdajfzbysv7h"; depends=[]; }; TPD = derive2 { name="TPD"; version="0.1.2"; sha256="1h8lgcrlsk68x2y01vgcn7dpq5q5180khz4csr8jbscbcdwljcl9"; depends=[ggplot2 gridExtra ks mvtnorm]; }; TPEA = derive2 { name="TPEA"; version="3.1.0"; sha256="1yyc3q4dyf4d8m7wi851dnxf3xnvvfnvj28kl8z8py4r4jsb2hfy"; depends=[foreach igraph Matrix MESS RCurl XML]; }; TPmsm = derive2 { name="TPmsm"; version="1.2.1"; sha256="1vynzb6qpp8785rdjyarhvwbkasviamhljjlnp4i0dds96wwdgx1"; depends=[KernSmooth]; }; @@ -3772,6 +3836,7 @@ in with self; { TTS = derive2 { name="TTS"; version="1.0"; sha256="0dhxj474dqjxqg0fc2dcx8p5hrjn9xfkn0rjn2vz3js92fa9ik9h"; depends=[mgcv sfsmisc]; }; TTmoment = derive2 { name="TTmoment"; version="1.0"; sha256="0a4rdb4fk1mqnvvz0r15kni0g5vcj4xkkcwwv7c2gxc94xh5i5ih"; depends=[mvtnorm]; }; TUWmodel = derive2 { name="TUWmodel"; version="0.1-8"; sha256="0c00jd2bq4i5fd55hj7l2grkpn990p0kmhbsh95b2zrzhbwgcjp6"; depends=[]; }; + TVsMiss = derive2 { name="TVsMiss"; version="0.1.1"; sha256="1lvswq3syp2mfcf0higmyg5k5qhg1q6jaz8g75az3xajn4jylm0k"; depends=[glmnet Rcpp]; }; Table1Heatmap = derive2 { name="Table1Heatmap"; version="1.1"; sha256="1nrabjivfsdhaqmlq365pskkrp99jqsxn8vy03mdnqn5h5zv7wvx"; depends=[colorRamps]; }; TableMonster = derive2 { name="TableMonster"; version="1.2"; sha256="1cl70d0svzx8nsg6kw5dv50s9d6wxqkyg39d2d4vissbpilq6arn"; depends=[xtable]; }; TableToLongForm = derive2 { name="TableToLongForm"; version="1.3.1"; sha256="135q0bgsm2yndrg3vpwmihbqlyf3qkm97i0jvcw6bf06p6b2fk41"; depends=[]; }; @@ -3785,7 +3850,7 @@ in with self; { Taxonstand = derive2 { name="Taxonstand"; version="2.1"; sha256="0dvhiqggbv1by284fg38rcvvrxr9q3zp5gh51p1dh0129h73qj7i"; depends=[pbapply]; }; TcGSA = derive2 { name="TcGSA"; version="0.10.5"; sha256="14gnlk2r0q9zjc3431v97s7ydcyycvl0xh8bmz08mhzi20snrkpq"; depends=[cluster ggplot2 gplots GSA gtools lme4 multtest reshape2 stringr]; }; Tcomp = derive2 { name="Tcomp"; version="1.0.0"; sha256="0ddswvww9yk31gh8qb9nh0glf9w2mp3ny7zps79kdcnvbkrpcbfs"; depends=[forecast Mcomp]; }; - TeXCheckR = derive2 { name="TeXCheckR"; version="0.4.4"; sha256="1dbs9i5py9amnx8l6z74py12v52d1b0wl0azcwqsgd8n76xlfqg1"; depends=[clisymbols crayon data_table fastmatch hunspell hutils magrittr readr rstudioapi stringi zoo]; }; + TeXCheckR = derive2 { name="TeXCheckR"; version="0.5.1"; sha256="18p3hyrrglgn2fdn5q9p1ayb58nznpdr5sy9mniybzsxrmfhghax"; depends=[clisymbols crayon data_table fastmatch hunspell hutils magrittr rstudioapi zoo]; }; TeachBayes = derive2 { name="TeachBayes"; version="1.0"; sha256="1mfhlkm7wp2i4hvc63xzfyw3q4z1xhlbi933pkqkbrhih94z4rz7"; depends=[dplyr ggplot2 gridExtra LearnBayes shiny]; }; TeachNet = derive2 { name="TeachNet"; version="0.7"; sha256="1p39bsf846r7zwz4lrrv2bpyx9yrkqzrnacajwrz3jjqj6qpp6cn"; depends=[]; }; TeachingDemos = derive2 { name="TeachingDemos"; version="2.10"; sha256="016pivvy8gzz8f3clnr5dg488rb1lf0l5s00c3v34gm1dgiw5x1f"; depends=[]; }; @@ -3804,6 +3869,7 @@ in with self; { ThreeArmedTrials = derive2 { name="ThreeArmedTrials"; version="1.0-0"; sha256="075cn99k06lgdd0cwl1i9242fcxwmd5malcyks0mmwjf9kzw00z2"; depends=[MASS numDeriv]; }; ThreeGroups = derive2 { name="ThreeGroups"; version="0.21"; sha256="0hipxa45v9ysb2qbk33kjycnvqar7bff1ajxd6fzhpc3jc9hflw4"; depends=[]; }; ThreeWay = derive2 { name="ThreeWay"; version="1.1.3"; sha256="17yl8zq029wiy3c0f4ssljx85dnm9n862wj2d24w7p0lxlvarmz6"; depends=[]; }; + Thresher = derive2 { name="Thresher"; version="0.12.3"; sha256="1lrydxrv67ga73bzxyvnibmggr9kixq2jb6as4cv35rm93vs5mrg"; depends=[ade4 ClassDiscovery colorspace MASS movMF oompaBase PCDimension]; }; ThresholdROC = derive2 { name="ThresholdROC"; version="2.6"; sha256="0ah102z6v9k5pxp3kbj5ffa9vhb7vi7axjkrg5qy5b4spnb71qsg"; depends=[MASS numDeriv pROC]; }; TickExec = derive2 { name="TickExec"; version="1.1"; sha256="0v0m0wi49yw0ply19vnirl2zwnk61sxalx24l8cadvkssgs13509"; depends=[]; }; TiddlyWikiR = derive2 { name="TiddlyWikiR"; version="1.0.1"; sha256="0vwwjdmfc8c0y2gfa8gls1mzvp29y39c9sxryrgpk253jj9px1kr"; depends=[]; }; @@ -3815,13 +3881,13 @@ in with self; { TimeMachine = derive2 { name="TimeMachine"; version="1.2"; sha256="1dz0j777wmd8mpkm2ryiahpcw6w88w429zjcw6m67pi20r1992cb"; depends=[]; }; TimeProjection = derive2 { name="TimeProjection"; version="0.2.0"; sha256="04yr4cg2khkw9n3y3qk0ni1327k4pxm09zz2xg8mpjdvgi4p9yi3"; depends=[lubridate Matrix timeDate]; }; TimeSeries_OBeu = derive2 { name="TimeSeries.OBeu"; version="1.2.2"; sha256="1a44fb29yacwgdiwaf5fpxzc5222cpi5mkv7l0dh43b6lh8f0j5k"; depends=[forecast jsonlite locfit trend tseries]; }; - TimeVTree = derive2 { name="TimeVTree"; version="0.2.1"; sha256="0657y6s4w83yda36q1isr3zwd8vv9wminljdpivs8c89p0cwm3yb"; depends=[survival]; }; + TimeVTree = derive2 { name="TimeVTree"; version="0.3.1"; sha256="124kg9zcq4b2j4qvg9f6gykbmzf69qjnnw54nv213ip2h4rdkv32"; depends=[survival]; }; TimeWarp = derive2 { name="TimeWarp"; version="1.0.15"; sha256="1v6f6d1h9dc8npdy0ph5hhc4jjkzh8kac48lz4ahgngi9n0xwql9"; depends=[]; }; Tinflex = derive2 { name="Tinflex"; version="1.2"; sha256="0rx4aj0bxiaaap3f43jzf3rlmrjp0g8aplg1ybccdyahx4p727bn"; depends=[]; }; - TipDatingBeast = derive2 { name="TipDatingBeast"; version="1.0-7"; sha256="1lc63xghjny45nkrppf06lxvhbqnw9w5i06bmncm90hm0kam092b"; depends=[DescTools mclust TeachingDemos]; }; + TipDatingBeast = derive2 { name="TipDatingBeast"; version="1.0-8"; sha256="1yx4jyh3a5s4h8anvd6pc73fzzcfdll4kp89b2xi0i01yswx22pd"; depends=[DescTools mclust TeachingDemos]; }; TippingPoint = derive2 { name="TippingPoint"; version="1.1.0"; sha256="1f5bfag892yk47r1pw2rlvqz9qnkaz8radprpxh0q0knviw3f9fp"; depends=[bayesSurv ggplot2 RColorBrewer reshape2]; }; Tlasso = derive2 { name="Tlasso"; version="1.0.1"; sha256="0flx4l7q3qndp77349ayfrszyim7mvs7yfvv3j9a1mhf3gdn9j14"; depends=[expm huge igraph rTensor]; }; - Tmisc = derive2 { name="Tmisc"; version="0.1.17"; sha256="11i807ma7mhx9ba675ifs42b5gr2dgr2z2zx35ga0jav464n9vk0"; depends=[audio dplyr rstudioapi tibble]; }; + Tmisc = derive2 { name="Tmisc"; version="0.1.19"; sha256="148kgy1pgn03f9h72i0zg62lamdnjl1hbwkzgrnr8p0zw5i0v1xm"; depends=[dplyr rstudioapi tibble]; }; Tnseq = derive2 { name="Tnseq"; version="0.1.2"; sha256="1n76yzk15p8i5bp3k6fszmdqk2d791r4sb8hg5hb61zb92r7wqlj"; depends=[Biobase Ckmeans_1d_dp DESeq edgeR limma]; }; ToolsForCoDa = derive2 { name="ToolsForCoDa"; version="1.0.2"; sha256="0x05phwm6gqw1pmars1ypg86sggflffw9g2d0lc5gfsy93nrg0rv"; depends=[calibrate HardyWeinberg MASS]; }; TopKLists = derive2 { name="TopKLists"; version="1.0.6"; sha256="1hmm9g68scq8sqdb9axqn51p00mx6p6lw0fdgjljfi2q72xcqhq3"; depends=[gplots Hmisc]; }; @@ -3839,7 +3905,7 @@ in with self; { TreatmentSelection = derive2 { name="TreatmentSelection"; version="2.1.1"; sha256="1pw64hx697jg2f1r2zd8y98g3ivj2gm8fnixcjfn4drsd0xixb4p"; depends=[binom ggplot2 survival]; }; TreeBUGS = derive2 { name="TreeBUGS"; version="1.3.1"; sha256="0zwbp7z31hw6krwhf21wpy5ryfhf0hhipjrsmvbrb7d4sx9am2vb"; depends=[coda hypergeo logspline MASS Rcpp RcppArmadillo rjags runjags]; }; TreePar = derive2 { name="TreePar"; version="3.3"; sha256="1sm518b1b4b1p0n5979qzvi2nacxpp3znbg9n75pf2a8z8wy6p4l"; depends=[ape deSolve Matrix subplex TreeSim]; }; - TreeSearch = derive2 { name="TreeSearch"; version="0.0.8"; sha256="1w65pw2qj5jcpg2v41kyhp0zq7pr56rxw1vrshxcpwxlwjj1sii6"; depends=[ape memoise phangorn R_cache Rdpack]; }; + TreeSearch = derive2 { name="TreeSearch"; version="0.1.2"; sha256="0q25zw53whp1v57pkc50h2j7jb64jpip00s0qnmvdgncbrs4zhx5"; depends=[ape memoise phangorn R_cache Rdpack]; }; TreeSim = derive2 { name="TreeSim"; version="2.3"; sha256="1y98m2whpx9kssgklw2d6prs6af9vcn8yva1l7lm1l509py1fn6h"; depends=[ape geiger]; }; TreeSimGM = derive2 { name="TreeSimGM"; version="2.3"; sha256="0qwqvmmdn290llz5hmmx2q24jjmd1bxssrslzv31kzi1yq5h6w0b"; depends=[ape TreeSim]; }; TrendInTrend = derive2 { name="TrendInTrend"; version="1.0.2"; sha256="0ymlgalddnfnb55s31bysm68yh823ys0rr5fgiic4a2ipnbfd8qf"; depends=[pROC rms]; }; @@ -3857,6 +3923,7 @@ in with self; { TurtleGraphics = derive2 { name="TurtleGraphics"; version="1.0-8"; sha256="0h77pj7rs3lrqi1y2dm1cbrmj13mjpq6y5nw8bcq0s2kbnkfw67l"; depends=[]; }; TwoCop = derive2 { name="TwoCop"; version="1.0"; sha256="1ycxq8vbp68z82r2dfg2wkc9zk3bn33d94xay20g2p55lnzl2ifd"; depends=[]; }; TwoPhaseInd = derive2 { name="TwoPhaseInd"; version="1.1.1"; sha256="0xsqiq4x7vmhif9j8zi1smbchwm4fsbgb10i4vxi0biijybizk9z"; depends=[survival]; }; + TwoRegression = derive2 { name="TwoRegression"; version="0.1.2"; sha256="0qr9zrfmbh4c4207gvwa384q5njjx6nsl6lc58d25m8bkfalifpi"; depends=[data_table dplyr magrittr seewave]; }; TwoStepCLogit = derive2 { name="TwoStepCLogit"; version="1.2.5"; sha256="050y7na91izg36gkwd8yn8rx3r39dk6qlvhd3137f3jnk4v00bck"; depends=[survival]; }; UBCRM = derive2 { name="UBCRM"; version="1.0.1"; sha256="1h9f8wlxdgb67qqqnfhd9gfs4l2cq84vajhcb0psva0gwdd1yf6i"; depends=[]; }; UBL = derive2 { name="UBL"; version="0.0.6"; sha256="0238irg7r3g248h4x4bdb308wvfqq99hwykywf4k2bssdd25kwjk"; depends=[automap gstat MBA randomForest sp]; }; @@ -3864,7 +3931,7 @@ in with self; { UNCLES = derive2 { name="UNCLES"; version="2.0"; sha256="0c61sm09dh0yfrjrjjnizg7qrf8xgc1zdldwhjh64kq8k8g5wa69"; depends=[class kohonen pdist]; }; UNF = derive2 { name="UNF"; version="2.0.6"; sha256="0sr740dhfp7z9wvhajww43g5gz79x5y5dbflw5a813jgmiqm1jyq"; depends=[base64enc digest]; }; UPMASK = derive2 { name="UPMASK"; version="1.1"; sha256="1qxajvld8g2mii12agypcm50fps9bai6d2wx6l0bv3srk80in7ai"; depends=[DBI MASS RSQLite]; }; - USAboundaries = derive2 { name="USAboundaries"; version="0.3.0"; sha256="0rza1np6320xm9ppn458cwgz4zaq173m3g0ylvxbx1fxq716lqj6"; depends=[]; }; + USAboundaries = derive2 { name="USAboundaries"; version="0.3.1"; sha256="1mqbxkv347307mbvn70929bi3l8wmiwrp86rxdgy45g2ddjdcb6s"; depends=[]; }; USCF = derive2 { name="USCF"; version="0.1.3"; sha256="00ynxfd4lg8g4mspz5izxvgkj27l2i1cnp0z0dnkhsbxsg0161mj"; depends=[]; }; USGSstates2k = derive2 { name="USGSstates2k"; version="1.0.1"; sha256="11yk0pkss23j6fmmxnjkjm9p24ln343y4hijigbrbvcnb21wj2py"; depends=[sp]; }; UScancer = derive2 { name="UScancer"; version="0.1-2"; sha256="0p1kxw1phqq598ljk3njznc9kmgscc8gmwdrvx1scba9rr6n61kl"; depends=[rgdal]; }; @@ -3878,8 +3945,8 @@ in with self; { Umatrix = derive2 { name="Umatrix"; version="3.1"; sha256="131j7yrb0yzffl6gvirdj29zmsbwg8163i15gg9f0clfcrl1kcx6"; depends=[abind AdaptGauss deldir fields geometry ggplot2 pdist plyr png Rcpp reshape2 shiny shinyjs]; }; Umpire = derive2 { name="Umpire"; version="1.3.4"; sha256="0kxndg96ah6sk1m216f2dmkg73w10lyg3rv7qsrnn145mznsdlw1"; depends=[]; }; UncerIn2 = derive2 { name="UncerIn2"; version="2.0"; sha256="08cg7armz9xwwn1222aws98cwrvmw0s73pxpnszmrmrli1qs92k1"; depends=[automap fields geoR gstat RandomFields Rcpp sp]; }; - UncertainInterval = derive2 { name="UncertainInterval"; version="0.4.6"; sha256="17xirpichh4c9qajkz4xywd8881wqdni6d3pqvsy2h13fvidb83q"; depends=[nloptr reshape2 rootSolve]; }; - UniDOE = derive2 { name="UniDOE"; version="1.0.1"; sha256="1hjraksvxvxz4xbrq97x6xf3r0f90c484ix92zapylyxvkifx628"; depends=[Rcpp]; }; + UncertainInterval = derive2 { name="UncertainInterval"; version="0.4.7"; sha256="0b7mx919lbj12zrj8l01wfrdpqiq7s7p9q25alp7yf4jpv9w4vfa"; depends=[nloptr reshape2 rootSolve]; }; + UniDOE = derive2 { name="UniDOE"; version="1.0.2"; sha256="14jz4acrvbv59sbr7gya8g0z749vv0i04gl5wl0y4218byjvw6bs"; depends=[Rcpp]; }; UniIsoRegression = derive2 { name="UniIsoRegression"; version="0.0-0"; sha256="0lmrmb9sbk41ak7sbcrzhfnijb1skgb4lqg9m9imc98lcp69h7z0"; depends=[Rcpp]; }; Unicode = derive2 { name="Unicode"; version="10.0.0-1"; sha256="1kj4b29gj3p0wzlzxqn7lwzabair6np705va0nxissfybpmwalgk"; depends=[]; }; UnivRNG = derive2 { name="UnivRNG"; version="1.1"; sha256="0vjsqc1y24z7zlclglh55kkxjhy0dc5gjsy427zdv95j58jbxa66"; depends=[]; }; @@ -3887,7 +3954,7 @@ in with self; { UsingR = derive2 { name="UsingR"; version="2.0-5"; sha256="1w1swcb5srb2b76agbh3mipz8b3vbhpnhxfhg7k546y38j3crafq"; depends=[HistData Hmisc MASS]; }; V8 = derive2 { name="V8"; version="1.5"; sha256="155389k8laa48akg0bfsz65s4ddmpk0xpi1ha56z1sayv01vrrgc"; depends=[curl jsonlite Rcpp]; }; VAR_etp = derive2 { name="VAR.etp"; version="0.7"; sha256="0py5my3ilhcmz44m15hh0d219l9cz7rda4a9gbmf8wh9cgvvj1s3"; depends=[]; }; - VARSEDIG = derive2 { name="VARSEDIG"; version="1.5"; sha256="07zc1k3h9bh0vlqmxqgpniq8ccsfv99bp18h9x9gjl24dppc0xz7"; depends=[]; }; + VARSEDIG = derive2 { name="VARSEDIG"; version="1.6"; sha256="1iddpll0fdspzxxf2g1d6zwfs0xrnbq5zrch2a9flrfz2iam6brk"; depends=[]; }; VARsignR = derive2 { name="VARsignR"; version="0.1.3"; sha256="09mnf9hvsi4wx1c81yq97mzggwk6s7nka7awrws63icjybqjmra9"; depends=[HI minqa mvnfast]; }; VARtests = derive2 { name="VARtests"; version="1.0.1"; sha256="19xmf4mg4v1fwd002ccinfbsbpcq9qfmzc2sf710mqv6i8ghv6jm"; depends=[Rcpp RcppArmadillo sn]; }; VBLPCM = derive2 { name="VBLPCM"; version="2.4.4"; sha256="09b80313w2dljl009xzcfhdcl6flc8nqzw9pzgfbciwi61666ppb"; depends=[ergm mclust network sna]; }; @@ -3908,13 +3975,13 @@ in with self; { VNM = derive2 { name="VNM"; version="6.1"; sha256="195fcgs6rzpji250j5kikim4k2rfg1gqgz65f2vgfbmz76wi4za6"; depends=[Rcpp]; }; VRPM = derive2 { name="VRPM"; version="1.2"; sha256="1cai5a71vzkx0d7cwzsxbcz7r9cdkqjk4l4bp2ffj5pp7nrlh15r"; depends=[fields ggplot2 Hmisc kernlab R2HTML ROCR shiny survival viridis]; }; VSE = derive2 { name="VSE"; version="0.99"; sha256="07m5080nw72b77238v2wwdh4dxsvv6y78d4j1329n90wyj2crxl4"; depends=[car GenomicRanges igraph IRanges]; }; - VSURF = derive2 { name="VSURF"; version="1.0.3"; sha256="0fgy1qk1jkrnil4cirkp2lj21xjwbpgjgxqrsjs321s69rw2dy1j"; depends=[doParallel foreach randomForest rpart]; }; + VSURF = derive2 { name="VSURF"; version="1.0.4"; sha256="1sby2ls8yhxv4hx0y508pypsj1sbc0d269yl0xnqbxz44bhj8zzm"; depends=[doParallel foreach randomForest rpart]; }; VTrack = derive2 { name="VTrack"; version="1.21"; sha256="1acf2b8zy72shc4768rhikfa3590h3l3nwk32jk7pwsms0nb87rf"; depends=[checkmate doParallel foreach gdistance gstat Hmisc intervals lubridate plotKML plyr raster sp spacetime XML]; }; - VWPre = derive2 { name="VWPre"; version="1.0.1"; sha256="1q6i1ijw9sx5k9k1gpmhsm99hwgsj6kjkak3lnq7458563vd640m"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; }; + VWPre = derive2 { name="VWPre"; version="1.1.0"; sha256="1ccrim9nx5fmmadg687gz9qrfkyxp48rskg1n2pxfwd3h10c9js1"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; }; VaRES = derive2 { name="VaRES"; version="1.0"; sha256="0gw05jiqgirhz3c8skbb07y4h44r6vi68gnd5y7ql455v0c2raza"; depends=[]; }; VarED = derive2 { name="VarED"; version="1.0.0"; sha256="16j9p2a143y4hqclsv1mig0fccrzjx2r0lll0wz8isjp9x1wzjv8"; depends=[]; }; VarReg = derive2 { name="VarReg"; version="1.0.1"; sha256="00ygs9gk2719fnhb47z1pj7qacapzg9qs1li2206vsfrmqxjvj1a"; depends=[sn survival]; }; - VarSelLCM = derive2 { name="VarSelLCM"; version="2.0.1"; sha256="08kpnppa5mm1xjbdgl354py9jy57x4r0nbv8z4skzc1k972qrgy9"; depends=[mgcv Rcpp RcppArmadillo]; }; + VarSelLCM = derive2 { name="VarSelLCM"; version="2.1.1"; sha256="0yy07fj0jkrninpwgnkw4h25yvbnb9z8kc02056nyh21kpj59vkl"; depends=[ggplot2 mgcv Rcpp RcppArmadillo shiny]; }; VarSwapPrice = derive2 { name="VarSwapPrice"; version="1.0"; sha256="12q2wp2cqi9q47mzbb7sc250zkjqkhs9z0h93ik0h63dv339abgj"; depends=[]; }; VarfromPDB = derive2 { name="VarfromPDB"; version="2.2.7"; sha256="1sb31338r2p0jsa3k72q9lc5f57cybywmda7q2j8byngh1fjvgyz"; depends=[curl RISmed stringi stringr XML XML2R]; }; VariableScreening = derive2 { name="VariableScreening"; version="0.1.1"; sha256="03l929qhgr1bd721488xx0il1hlswv3zdad518ki94ghq9c4nmg3"; depends=[expm gee MASS]; }; @@ -3923,7 +3990,7 @@ in with self; { Vdgraph = derive2 { name="Vdgraph"; version="2.2-2"; sha256="1q8l711zbrrj4h1wmpv93nbvlg8xi6kjv22zpidkck8ncpyyla80"; depends=[]; }; VecStatGraphs2D = derive2 { name="VecStatGraphs2D"; version="1.8"; sha256="0jjxdwcj0n6kk5l7hw4zibpikqxhkkik5819qv75z4gqdgg0fgch"; depends=[MASS]; }; VecStatGraphs3D = derive2 { name="VecStatGraphs3D"; version="1.6"; sha256="1pnpgnxdiis4kzwhh17k61aidyan5fp9rzqhvwf6gljb4csqsk54"; depends=[MASS misc3d rgl]; }; - VennDiagram = derive2 { name="VennDiagram"; version="1.6.19"; sha256="0f0kw5rvxl6v39yhgrz819hk1j0xd48iz5wfl91qd1vjw1kg9fn2"; depends=[futile_logger]; }; + VennDiagram = derive2 { name="VennDiagram"; version="1.6.20"; sha256="1ic1jaxzw98si2p4n1fl4n3myhd7fpw0njb634cwhviwybzv6775"; depends=[futile_logger]; }; VertexSimilarity = derive2 { name="VertexSimilarity"; version="0.1"; sha256="0f638y272dbmz5747wxqy9pxasxk3a9f9wf31gf297qx7268ab1m"; depends=[igraph]; }; VertexSort = derive2 { name="VertexSort"; version="0.1-1"; sha256="0n9m5l85ylin6756rsksak94nv0626qd7czhhj6plz4nfrr27sgl"; depends=[igraph snowfall]; }; VeryLargeIntegers = derive2 { name="VeryLargeIntegers"; version="0.1.6"; sha256="1ccl4j3vb6aw1qfbqil67dy74daldajwzm7s5hqcidm73fd0wknc"; depends=[Rcpp]; }; @@ -3941,7 +4008,7 @@ in with self; { WARN = derive2 { name="WARN"; version="1.2-3"; sha256="0vkp70cc3slz9y8qfybrqyjyglsxz9fnqrid735h2a113h4xvr3v"; depends=[MASS]; }; WCE = derive2 { name="WCE"; version="1.0"; sha256="1kb1z67ymnz8cgwxq6m5fpqgxmmrfiwh2q3x4rhanac2sinagyn4"; depends=[plyr survival]; }; WCQ = derive2 { name="WCQ"; version="0.2"; sha256="1yhkr2iazd7lh9r68xz1lh32z6r1sdnmqrjshcrm4rbwai0j3lkr"; depends=[]; }; - WDI = derive2 { name="WDI"; version="2.4"; sha256="0ih6d9znq6b2prb4nvq5ypyjv1kpi1vylm3zvmkdjvx95z1qsinf"; depends=[RJSONIO]; }; + WDI = derive2 { name="WDI"; version="2.5"; sha256="0wm3b844pn33047wfd8yp22c6ysdsi8qx71fm1h5rq5vm9mcg9cp"; depends=[RJSONIO]; }; WEE = derive2 { name="WEE"; version="1.0"; sha256="0i3h67p72lr708mwdw3rbzr1lqqr8n2dxv7f0bwyqzxv41sx1iz3"; depends=[doParallel foreach quantreg]; }; WGCNA = derive2 { name="WGCNA"; version="1.63"; sha256="1225dqm68bynkmklnsxdqdd3zqrpzbvqwyly8ibxmk75z33xz309"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore Rcpp robust survival]; }; WHO = derive2 { name="WHO"; version="0.2"; sha256="0rpk7ddpkjcqs0m7cgxs55k178js0d70ccfximp2vqrsw0igkmk9"; depends=[dplyr httr]; }; @@ -3952,9 +4019,9 @@ in with self; { WPC = derive2 { name="WPC"; version="1.0"; sha256="0li502hwa4n945yfnilslyvl12ls66kazbfmxb4kkjbaf500mjp9"; depends=[msm survival]; }; WPKDE = derive2 { name="WPKDE"; version="0.1"; sha256="100vla11fbw16x5n4w4kbslz4n725v4x6j0hrxzrk99ryl0crmf6"; depends=[]; }; WRS2 = derive2 { name="WRS2"; version="0.9-2"; sha256="0szjq9ffckjqa128avs4cymqvxk7dhldzj620kcq7q59aagrnj04"; depends=[MASS mc2d plyr reshape]; }; - WRSS = derive2 { name="WRSS"; version="1.1"; sha256="1iv6msack3ha2i8l4c7p9964b9f3c2qza1yxjsyx9sn1wzfxs6fj"; depends=[Hmisc]; }; + WRSS = derive2 { name="WRSS"; version="1.2"; sha256="0nml5sv0c4fflxvhhf7zwxdz45iid4n7v8kyc4l1qhn0wi2hihdk"; depends=[Hmisc]; }; WRTDStidal = derive2 { name="WRTDStidal"; version="1.1.0"; sha256="0yyhls0qzwwj4sz5d1nvzfiacx28dmf2hgjc7xgfi2qjkckg40hs"; depends=[caret dplyr EnvStats fields foreach forecast ggplot2 gridExtra lubridate purrr quantreg RColorBrewer survival tidyr]; }; - WVPlots = derive2 { name="WVPlots"; version="0.2.8"; sha256="1d9016k05s3v3gmxsig6xk87npmgni9mfyqcwcvd522zisfx2g6z"; depends=[cdata ggplot2 gridExtra mgcv plotly replyr seplyr sigr wrapr]; }; + WVPlots = derive2 { name="WVPlots"; version="0.3.1"; sha256="19ddgkblyqfvnx4a9c7i8nfvcfrmnsbbb3s61hqp16j59p5gfk3x"; depends=[ggplot2 gridExtra mgcv sigr wrapr]; }; WWGbook = derive2 { name="WWGbook"; version="1.0.1"; sha256="0q8lnd1fp4rmz715x0lf61py3xw8wg55yq3gvswaqwy68dlqrzjc"; depends=[]; }; WWR = derive2 { name="WWR"; version="1.2.2"; sha256="0ia1dd12r1l08s9nhgvk55jmqwv58jawm25gd2ni6wpa3mcmq02g"; depends=[inline]; }; WaterML = derive2 { name="WaterML"; version="1.7.1"; sha256="0aqcanq2l3m9w1kglmkbqshs80wx9inmjp0c1i2j901g4k35ss5j"; depends=[httr RJSONIO XML]; }; @@ -3962,15 +4029,18 @@ in with self; { Wats = derive2 { name="Wats"; version="0.10.3"; sha256="1wh4wxzmdj154mh61ng4bg827hpx1kw85x34c1d7xdpbq3wag4g1"; depends=[colorspace ggplot2 lubridate plyr RColorBrewer testit zoo]; }; WaveLetLongMemory = derive2 { name="WaveLetLongMemory"; version="0.1.2"; sha256="1p9ld6w2qgbvkvp7xkzzd14v89rxcwl6vlr1zgxkpc5awl1ln1a8"; depends=[fracdiff wmtsa]; }; WaveletArima = derive2 { name="WaveletArima"; version="0.1.0"; sha256="1f8g6r9qmhr2y7sf7x2vphv2sab5rywpfjvhsxfmzljjmirf2v3n"; depends=[forecast fracdiff wavelets]; }; - WaveletComp = derive2 { name="WaveletComp"; version="1.0"; sha256="16ghxqjbv39pmgd52im6ilkkh0hpnaw8ns0hwkngpbr479m1grdp"; depends=[]; }; + WaveletComp = derive2 { name="WaveletComp"; version="1.1"; sha256="07w2aa0jiflvxyqhgh48705hg8hjspd103jd00i2pcw2v42hwmf8"; depends=[]; }; WaverR = derive2 { name="WaverR"; version="1.0"; sha256="084fhzggzm075w6wp2lqd3j0an21idhw8z5l8ynz4y96mpmn204a"; depends=[kimisc MASS]; }; + WeMix = derive2 { name="WeMix"; version="1.0.2"; sha256="1wj1jxw65i94xf5zk9phgkwybvl2h05ynq0zhdc7q3j6b90mv9hn"; depends=[lme4 MASS minqa NPflow numDeriv Rcpp RcppArmadillo Rmpfr statmod]; }; WebGestaltR = derive2 { name="WebGestaltR"; version="0.1.1"; sha256="0cdpfwp4whx8pff73acxga072lwbibl44hxdjs9jsb5i21h55vbr"; depends=[data_table doParallel foreach pkgmaker PythonInR rjson]; }; - WeightIt = derive2 { name="WeightIt"; version="0.3.1"; sha256="0iadn4hpmfpih75nz17kligh3avjzs1cfi3pkkgx378ml64kdz8m"; depends=[cobalt]; }; + WebPower = derive2 { name="WebPower"; version="0.5"; sha256="184wig66bcg7vsppaijq5jpq2hffl3bhshdx4ilz5hw98mimxg13"; depends=[lavaan lme4 MASS PearsonDS]; }; + WeibullR = derive2 { name="WeibullR"; version="1.0.9"; sha256="13qkfnfp2pbvb78mj7fg8cgjnbrxv6dbms70wvn9f3mc70djmrb3"; depends=[Rcpp RcppArmadillo]; }; + WeightIt = derive2 { name="WeightIt"; version="0.3.2"; sha256="13rswk3qr01y3ikpa2d9z7l5wicgsmiqmmhx7cbnyi4jny316sa3"; depends=[cobalt]; }; Weighted_Desc_Stat = derive2 { name="Weighted.Desc.Stat"; version="1.0"; sha256="030i12mnwlj976avvk3grrccgprsckmc35dm2ajwdfc9dijhypnj"; depends=[]; }; WeightedCluster = derive2 { name="WeightedCluster"; version="1.2-1"; sha256="04gsr65mssv4cz4v8sh44qhyzn0isll057d45z4ljv6sx0an5yhl"; depends=[cluster RColorBrewer TraMineR]; }; WeightedPortTest = derive2 { name="WeightedPortTest"; version="1.0"; sha256="007v3w9ssiv2sds7sikpal27g6pxwxhs7bvcyw6kr0vg8gvlbi8h"; depends=[]; }; WhatIf = derive2 { name="WhatIf"; version="1.5-9"; sha256="0ihpp3wbhpsg00g0s31l0ca4q0a2sch2a2j8cgz14g8na43x8831"; depends=[lpSolve pbmcapply Zelig]; }; - WhiteStripe = derive2 { name="WhiteStripe"; version="2.3.0"; sha256="10rnfwq3f6msrzmgifm33dqwnncfhybiah8czh1z7g3iw2859qbc"; depends=[mgcv oro_nifti]; }; + WhiteStripe = derive2 { name="WhiteStripe"; version="2.3.1"; sha256="1qyv06ai83b1idfg4bgr97askyzlwi2dv8d5wkivb5czp7crdri1"; depends=[mgcv oro_nifti]; }; WhopGenome = derive2 { name="WhopGenome"; version="0.9.7"; sha256="1xa7d9x5ny8g79scfkv7v5ix9m3mfzg0fks2bsan9zqyhcd01fsq"; depends=[]; }; WiSEBoot = derive2 { name="WiSEBoot"; version="1.4.0"; sha256="1fch78884ay7m2gy602k8df78gkvjiwzkjk550w0k4xbv430ld0h"; depends=[FAdist wavethresh]; }; WikiSocio = derive2 { name="WikiSocio"; version="0.7.0"; sha256="1rc90cidc8mj8x7vw82vx41ivwnmil3cmc1whc8ghxrwli256w32"; depends=[httr igraph pbapply plyr RCurl stringr XML]; }; @@ -3981,23 +4051,23 @@ in with self; { WilcoxCV = derive2 { name="WilcoxCV"; version="1.0-2"; sha256="1kbb7ikgnlxybmvqrbn4cd8xnqrkwipk4xd6yja1xsi39a109xzl"; depends=[]; }; WindCurves = derive2 { name="WindCurves"; version="0.1.3"; sha256="0bvbnrkdk0g0radgcw4zbhq6czpvq3f7f34x83qk09i8ngmwd28c"; depends=[drc imputeTestbench readbitmap]; }; WordPools = derive2 { name="WordPools"; version="1.0-2"; sha256="1izs4cymf2xy1lax85rvsgsgi05ygf0ibi9gzxc96sbgvy4m78kf"; depends=[]; }; - WordR = derive2 { name="WordR"; version="0.2.2"; sha256="1q8im3v30xil5qg4m1hypmj439rsx5g2x4mfxsgkz4xz2hwlfh4f"; depends=[dplyr officer ReporteRs]; }; + WordR = derive2 { name="WordR"; version="0.2.3"; sha256="0sn14s4vnmj6zs8mc8mj5ph78m9z9yr29lknqma3wrphb7cla50w"; depends=[dplyr officer ReporteRs]; }; Wrapped = derive2 { name="Wrapped"; version="2.0"; sha256="1z5kypsd39z9arsw57axckvl8b4jnr5wv60s9z58f5s89gn5vxxg"; depends=[AdequacyModel ald cubfits evd fBasics gamlss_dist GeneralizedHyperbolic GEVStableGarch glogis irtProb LCA lqmm metRology NormalLaplace normalp ordinal sgt SkewHyperbolic sld sn VarianceGamma VGAM]; }; WrightMap = derive2 { name="WrightMap"; version="1.2.1"; sha256="16zp7h28fap5hq5xzvkb4lc217yhfmwzfbvw2lsni0gf9qxqkgqd"; depends=[]; }; WriteXLS = derive2 { name="WriteXLS"; version="4.0.0"; sha256="0nwxi36w3rkzw9j0qil64gakhb101rxg1wydjkwlpg0nbsj1sm50"; depends=[]; }; - WufooR = derive2 { name="WufooR"; version="0.6.2"; sha256="1k5nmg8mg8m9salcb0jr87ws548ydc597v8m94y4qrrfchy623rg"; depends=[dplyr httr jsonlite]; }; + WufooR = derive2 { name="WufooR"; version="0.8"; sha256="0nwf66y1jb7dw4yhkdl9g4brh59ky4q4x6j9zbqdn70pcj9hq9jx"; depends=[dplyr httr jsonlite]; }; XBRL = derive2 { name="XBRL"; version="0.99.18"; sha256="1bwvxqbxdf1ynz2bv27l86h05h8y19q2li2y79xk819p5nkxq341"; depends=[Rcpp]; }; - XGR = derive2 { name="XGR"; version="1.1.2"; sha256="0zvqsd7ff8a46w58qklp2w0w785y8nhpx4mcvp27r0k8j9y5yji7"; depends=[BiocGenerics dnet dplyr GenomicRanges ggnetwork ggplot2 ggrepel igraph IRanges Matrix plot3D RCircos rtracklayer S4Vectors supraHex tidyr XML]; }; + XGR = derive2 { name="XGR"; version="1.1.3"; sha256="01czagfjx5w212l5h29klrrsg0qiprlsiwpz7pfqh44haifnq4pz"; depends=[BiocGenerics dnet dplyr GenomicRanges ggnetwork ggplot2 ggrepel igraph IRanges Matrix plot3D RCircos rtracklayer S4Vectors supraHex tidyr XML]; }; XHWE = derive2 { name="XHWE"; version="1.0"; sha256="1ca8y9q3623d0vn91g62nrqf3pkbcbkpclmddw5byd37sdrgsi5l"; depends=[]; }; XKCDdata = derive2 { name="XKCDdata"; version="0.1.0"; sha256="1lx9frlbc549qrh4d3m79r3l9icfzqkgfgp8raa8x46a2havi0a5"; depends=[assertthat dplyr glue htmltools httr jsonlite magrittr tibble]; }; - XLConnect = derive2 { name="XLConnect"; version="0.2-14"; sha256="06c88rkyavjv3p90hr3cz4y9jx3g6ik3sannjynjnms7d793w0fi"; depends=[rJava XLConnectJars]; }; - XLConnectJars = derive2 { name="XLConnectJars"; version="0.2-14"; sha256="0ckkvm8i2r60npx0zb36h98gmzgqig9d806cn6r5cghczz6g0xf6"; depends=[rJava]; }; - XML = derive2 { name="XML"; version="3.98-1.10"; sha256="1faza9bbllp67lf1yv1sllxc3iv8llz52m9diazhq322iqbh97m1"; depends=[]; }; + XLConnect = derive2 { name="XLConnect"; version="0.2-15"; sha256="1cvq677m09gwpwhj3fy15mbfn0s0b1y35w95pjnijiwpcpdxiq96"; depends=[rJava XLConnectJars]; }; + XLConnectJars = derive2 { name="XLConnectJars"; version="0.2-15"; sha256="1ipqyjgsh5a1ygsbhyqxyj9wfjv1f73cyfrpx6jvf0is5jklhvxx"; depends=[rJava]; }; + XML = derive2 { name="XML"; version="3.98-1.11"; sha256="18izvlg2x9mzr6yb3yf02ghwbyn00frki3av4lpc44r22m4djnsh"; depends=[]; }; XML2R = derive2 { name="XML2R"; version="0.0.6"; sha256="0azfh950r2b7ck3n1vzk3mdll7zy844nx3mbk676jxnj8gg7nxk5"; depends=[plyr RCurl XML]; }; XMRF = derive2 { name="XMRF"; version="1.0"; sha256="0jnyy9pcksfadznidqsbwh8nlqv3k0yppj76q8a2g0aidbdmg2cc"; depends=[glmnet igraph MASS Matrix snowfall]; }; XNomial = derive2 { name="XNomial"; version="1.0.4"; sha256="1mwx302576rmsjllbq2clfxilm3hkyp5bw0wmwqbn0kgv5wpy8z6"; depends=[]; }; - XR = derive2 { name="XR"; version="0.7.1"; sha256="1wly2wpjvmfjjng5kjr9rq1by550amigz10rfpl8iibv5b9kvzjy"; depends=[jsonlite]; }; - XRJulia = derive2 { name="XRJulia"; version="0.7.6"; sha256="1bvkrx4nvni858qw3p51bm2pidlfqdmk2pbmhwmb61pcbls3gpk8"; depends=[XR]; }; + XR = derive2 { name="XR"; version="0.7.2"; sha256="0j8rkjw9y7mb0yj24nlisfd84148pnnakz8i2y35y2b8gmh5zhvz"; depends=[jsonlite]; }; + XRJulia = derive2 { name="XRJulia"; version="0.7.7"; sha256="07332hv7kp5bk1wm24cf2fa9yz5l4mni1gw0ry1qnwh1zx5v8jcd"; depends=[XR]; }; XRPython = derive2 { name="XRPython"; version="0.8"; sha256="0alg33spiaqf3jwg1qn543nxvbfaqv8gvf5px3grhbgrcmi5mcmj"; depends=[reticulate XR]; }; XRSCC = derive2 { name="XRSCC"; version="0.1"; sha256="0hs2whjsd02avaz79zkrd8gjw9qd7l6ysxmhx4w1r7gb1cj9rr7c"; depends=[]; }; XiMpLe = derive2 { name="XiMpLe"; version="0.10-2"; sha256="16dmslc3ji9zbbm2khw8ib8rhwan0mdlfyd4h29v42lcx6l1d0pv"; depends=[]; }; @@ -4008,11 +4078,12 @@ in with self; { YaleToolkit = derive2 { name="YaleToolkit"; version="4.2.2"; sha256="12wggdyz0wgnmxnqhp8bypyy1x1p50g49fwdzl2l43il44cdyv0g"; depends=[foreach iterators]; }; YieldCurve = derive2 { name="YieldCurve"; version="4.1"; sha256="0w47j8v2lvarrclnixwzaq98nv1xh2m48q5xvnmk7j9nsv2l3p68"; depends=[xts]; }; YuGene = derive2 { name="YuGene"; version="1.1.5"; sha256="1f1bia1q1z2rzp4pw218zglf02x1m9zpz5gqllrd77ggw8ilqfjc"; depends=[mixOmics]; }; + ZIBBSeqDiscovery = derive2 { name="ZIBBSeqDiscovery"; version="1.0"; sha256="12g9rga9z6318ni6x6q9hdqlgl93y2xn8vf3gc6sm97fz8pliswx"; depends=[mcc]; }; ZIBseq = derive2 { name="ZIBseq"; version="1.2"; sha256="13rjy4jl9wil6hhpra4qmdis0iyqxchzsf9l7q6r0dz1f7dpd2nq"; depends=[gamlss gamlss_dist nlme]; }; ZIM = derive2 { name="ZIM"; version="1.0.3"; sha256="1497ki0pr0x21fz5wa2z6zgb2br99z56gvfxyn9cglqq45if6cjh"; depends=[MASS]; }; ZOIP = derive2 { name="ZOIP"; version="0.1"; sha256="0fraxzr2mfd7w705j2fryhh9vpg6nkag6kmk7p7in3zknxwipfh3"; depends=[boot GHQp numDeriv rmutil]; }; ZRA = derive2 { name="ZRA"; version="0.2"; sha256="1sx1q5yf68hhlb5j1hicpj594rmgajqr25llg7ax416j0m2rnagi"; depends=[dygraphs forecast]; }; - ZeBook = derive2 { name="ZeBook"; version="0.5"; sha256="1djwda6hzx6kpf4dbmw0fkfq39fqh80aa3q9c6p41qxzcpim27dw"; depends=[deSolve triangle]; }; + ZeBook = derive2 { name="ZeBook"; version="1.0"; sha256="06dg3jk37y64mdcb8hpxgj8rclgxqm96dalm7y5zjb7nrj9jfydk"; depends=[deSolve triangle]; }; Zelig = derive2 { name="Zelig"; version="5.1.6"; sha256="142kjmgma25pvr525y0mjiwivnmq8y8s1abw4kyqipcmphmgh3an"; depends=[AER Amelia coda dplyr Formula geepack jsonlite MASS MatchIt maxLik MCMCpack quantreg sandwich survey survival VGAM]; }; ZeligChoice = derive2 { name="ZeligChoice"; version="0.9-6"; sha256="1whfwc42lsi54xfr423h6jwbvpj6yjyyf0854k1f1ms13liahm8w"; depends=[dplyr Formula jsonlite MASS VGAM Zelig]; }; ZeligEI = derive2 { name="ZeligEI"; version="0.1-2"; sha256="0kilzfqmm6a41mmjvlynh3rnj30fqiq8gsja28fzwpf0lbl89slg"; depends=[dplyr ei eiPack Formula jsonlite MASS MCMCpack Zelig]; }; @@ -4020,6 +4091,7 @@ in with self; { Zseq = derive2 { name="Zseq"; version="0.2.0"; sha256="06dndi2b1q79bmxax11bv0l5ifcz1mhpvbn90y6a6xymrgcq0ivi"; depends=[gmp]; }; aCRM = derive2 { name="aCRM"; version="0.1.1"; sha256="0kzp568hd9c9a9qgniia5s5gv0q5f89xfvvwpzb197gqhs3x092v"; depends=[ada dummies kernelFactory randomForest]; }; aLFQ = derive2 { name="aLFQ"; version="1.3.4"; sha256="1q2l5cwkcsng22nxckgc7aalvy3qhvgga5nkchfpy53sxg68awqv"; depends=[bio3d caret data_table lattice plyr protiq randomForest reshape2 ROCR seqinr]; }; + aMNLFA = derive2 { name="aMNLFA"; version="0.1"; sha256="0sj6rxsdib5zmz78c94bjdlcdwhfkvbc7sp3pncj6vsvvzgqcjdp"; depends=[devtools ggplot2 gridExtra MplusAutomation plyr reshape2 stringr]; }; aRpsDCA = derive2 { name="aRpsDCA"; version="1.1.1"; sha256="0ghg43rd6bnv4jp8pkpd1ixp5l6kq5pr0mxq61q24s24g0m3s64p"; depends=[]; }; aRxiv = derive2 { name="aRxiv"; version="0.5.16"; sha256="1dghv40waprld9gg81p2is72sk0z6fla0pfiqzzfhky8lazaih01"; depends=[httr XML]; }; aSPC = derive2 { name="aSPC"; version="0.1.2"; sha256="1q301rw7dax5v58srg4jlcam1qq2igkaj7kg8wlnlml0hsck4c4a"; depends=[energy mvtnorm]; }; @@ -4038,12 +4110,13 @@ in with self; { abind = derive2 { name="abind"; version="1.4-5"; sha256="0b1zd8jbnl6l292cr9rb50m09fy3ylxvzkpgi5lfb1nbzddcwfis"; depends=[]; }; abjutils = derive2 { name="abjutils"; version="0.2.1"; sha256="0qrsc4if7aif73qp95lw6b5986c2r0jn7m39123zij8k15vc935b"; depends=[devtools dplyr glue httr magrittr plyr progress purrr rstudioapi scales stringi stringr tibble tidyr]; }; abn = derive2 { name="abn"; version="1.0.2"; sha256="0jxpw5mplnpc57jjg9w3zrik40g7va6s8m9zbfsyf0vqn645wfwq"; depends=[Cairo]; }; + abnormality = derive2 { name="abnormality"; version="0.1.0"; sha256="1fzfskl9akl06nliy8hkv2a0pznpj8pwcypg3gj5r2nzvr3kan9v"; depends=[MASS Matrix]; }; abodOutlier = derive2 { name="abodOutlier"; version="0.1"; sha256="1pvhgxmh23br84r0fbmv7g53z2427birdja96a67vqgz18r3fdvj"; depends=[cluster]; }; abundant = derive2 { name="abundant"; version="1.1"; sha256="1m76qdmqvwpgm0sihazi2dna7cgsz9rljal18vgffb5wamwmg9k7"; depends=[QUIC]; }; acc = derive2 { name="acc"; version="1.3.3"; sha256="1ii2vm47djxbixa75h690q1s2f9m9x6i8nkygik93j6dayr6kr1m"; depends=[circlize DBI ggplot2 iterators mhsmm nleqslv PhysicalActivity plyr R_utils Rcpp RcppArmadillo RSQLite zoo]; }; accSDA = derive2 { name="accSDA"; version="1.0.0"; sha256="0sgxy5y8kkc1n35657kifwfjsba7y5m1vbr7rkk5lmbpkzahqm61"; depends=[ggplot2 ggthemes gridExtra MASS rARPACK sparseLDA]; }; accelerometry = derive2 { name="accelerometry"; version="2.2.5"; sha256="00mn09j7y39sc7h5srnnfk2l73vhh6zq7rzc0vckfvs72lncmwv5"; depends=[Rcpp]; }; - accelmissing = derive2 { name="accelmissing"; version="1.1"; sha256="0s2vy16zcpvbqyqz4ifdqccs6bfp8sf7azvfy8jjcm73xncv6ij3"; depends=[mice pscl]; }; + accelmissing = derive2 { name="accelmissing"; version="1.4"; sha256="1nql9inx6azdzi3z4sfm2vdml2mms6krl8wzlf1dn1c97ahn57fy"; depends=[mice pscl]; }; accrual = derive2 { name="accrual"; version="1.3"; sha256="11clm9s5c5518nmp6hd6pjnp0s28y92b2i2x0xgj4j5g816p4j3z"; depends=[fgui SMPracticals tcltk2]; }; accrued = derive2 { name="accrued"; version="1.4.1"; sha256="05g1jb5914z18rcai1ahn7nihn27vr2rnadwv94gc1j7ivvikvs5"; depends=[]; }; acebayes = derive2 { name="acebayes"; version="1.4.1"; sha256="0wkygvhwf0y5jzkcj6prjmr9dlak1xgsbswlixqwrx5b48iqxgwh"; depends=[compare lhs randtoolbox Rcpp RcppArmadillo]; }; @@ -4061,14 +4134,14 @@ in with self; { activity = derive2 { name="activity"; version="1.1"; sha256="1lqajgxfps2h6amz1791vp3f52rs9ghmanq1nqfxqd2jmk3idkrx"; depends=[circular overlap pbapply]; }; activpalProcessing = derive2 { name="activpalProcessing"; version="1.0.2"; sha256="1y0bjx2qx53iy930y9iww4q1yzjj8y16cwgixk1mq3w4g1f116d1"; depends=[chron]; }; actogrammr = derive2 { name="actogrammr"; version="0.2.3"; sha256="1jzvarmd41yqlrkagzlc8m19n5mn0w0b36fy50lyvgrfsafjfbqa"; depends=[dplyr ggplot2 lubridate readr tidyr]; }; - actuar = derive2 { name="actuar"; version="2.3-0"; sha256="0qzzsc9s25l29fi1xgd5ypb4j1l08ghx180n0q5k9p2fn36zjz27"; depends=[expint]; }; + actuar = derive2 { name="actuar"; version="2.3-1"; sha256="0i0w5y0bgma42p4cbrbv0bxkambp7hgqqlsg90p5skfvg7r1n3bk"; depends=[expint]; }; ada = derive2 { name="ada"; version="2.0-5"; sha256="1h3a07czp0w3hrhjcg1fz721y8vsfclzqi3rq8qfzgpfb4h1f06r"; depends=[rpart]; }; adabag = derive2 { name="adabag"; version="4.2"; sha256="109wrl1pwvmyv2l909hrvk7dg4aa9pv449mvdycp50zwrsw9w0a7"; depends=[caret doParallel foreach rpart]; }; adagio = derive2 { name="adagio"; version="0.6.5"; sha256="0jy8g5604alaqbi5ynj95ig07igzbgk8x03a4x1rzkvfwvydfflz"; depends=[]; }; adapr = derive2 { name="adapr"; version="2.0.0"; sha256="1s57jdbi5pik56xjz1d4438ax6cywg2yq2s47h5g6wrwvpgr1qfw"; depends=[archivist devtools digest doParallel gdata ggplot2 git2r igraph knitr plotly plyr rmarkdown shiny shinydashboard versions]; }; adaptMCMC = derive2 { name="adaptMCMC"; version="1.3"; sha256="08v11rl0p4w94knb0yzs1ysj42xillya62yaw3zm40d4pqv7vcky"; depends=[coda Matrix]; }; adaptTest = derive2 { name="adaptTest"; version="1.0"; sha256="08d7a5dlzhaj236jvaw3c91008l66vf5i4k5anhcs32a3j8yh2iv"; depends=[lattice]; }; - adaptiveGPCA = derive2 { name="adaptiveGPCA"; version="0.1.1"; sha256="1jhkiz0gdjvgclqfksm10zza9iwy1z6k5wpviwa4r9a936f1i88k"; depends=[ape ggplot2 phyloseq shiny]; }; + adaptiveGPCA = derive2 { name="adaptiveGPCA"; version="0.1.2"; sha256="0bb6hw77dfa66b12xyazlp992gwjb1plylixlmq4cv4yjhnl9n5z"; depends=[ape ggplot2 phyloseq shiny]; }; adaptivetau = derive2 { name="adaptivetau"; version="2.2-1"; sha256="1hd2l1jv4i5mg0k0g8bbrvv43nk1zxbwh21594zayrzjyikb2593"; depends=[]; }; adaptsmoFMRI = derive2 { name="adaptsmoFMRI"; version="1.1"; sha256="1h79gh1bd6s2xhwf4whh72wf2cz4di2p8dnlf6192mfg108qc6nw"; depends=[coda Matrix MCMCpack mvtnorm spatstat]; }; addhaz = derive2 { name="addhaz"; version="0.4"; sha256="0i3czmv538m8s3pnxrhh2a1mrdv9m3hgzjkb25p7hygwnzz54drg"; depends=[boot MASS Matrix]; }; @@ -4077,12 +4150,11 @@ in with self; { additiveDEA = derive2 { name="additiveDEA"; version="1.1"; sha256="15nxpdybsda6yhjk23bpafr8v1zdx8332pcxf26k795q3ypjpiy2"; depends=[Benchmarking lpSolveAPI]; }; additivityTests = derive2 { name="additivityTests"; version="1.1-4"; sha256="048ds90wqjdjy1nyhna3m06asdklbh8sx1n556kss2j1r1pma1sw"; depends=[]; }; addreg = derive2 { name="addreg"; version="3.0"; sha256="13bwmgxylwi02g60j1rr51cr5jvvkl2nvf2lnnhnq46fhvs2ma7s"; depends=[combinat glm2 turboEM]; }; - ade4 = derive2 { name="ade4"; version="1.7-10"; sha256="0zk81x0yn30gbyc0jpzyw1nxd08ccihl6vyk0ijvj3aw3nr5flc6"; depends=[MASS]; }; + ade4 = derive2 { name="ade4"; version="1.7-11"; sha256="0wm54wcpn87rdh6vyw04cr8vgba899y6jsl61f22bmlvx6d7kkac"; depends=[MASS]; }; ade4TkGUI = derive2 { name="ade4TkGUI"; version="0.2-9"; sha256="0kfnikkzhyfxskrphr65b8amjhdfq35x6dda4kivdhn7ak07s3ll"; depends=[ade4 adegraphics lattice tkrplot]; }; adeba = derive2 { name="adeba"; version="1.1.2"; sha256="1z1law3qh6l902g62y8yapk4nypdmb20jmpwhxp9jbglalw9lm73"; depends=[mixtools pdist Rcpp]; }; adegenet = derive2 { name="adegenet"; version="2.1.1"; sha256="0ynfblp0hbd3dp3k86fn1wyhqr28lk6hs2bg4q7gyf0sfdfzwhrh"; depends=[ade4 ape boot dplyr ggplot2 igraph MASS reshape2 seqinr shiny spdep vegan]; }; - adegraphics = derive2 { name="adegraphics"; version="1.0-9"; sha256="1fscmisvfd3j9fy1562pjsfpgx16fhr5xwmkzmssxhgyia19f4sr"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; }; - adehabitat = derive2 { name="adehabitat"; version="1.8.20"; sha256="18z4a8168a2c7248s15hwkjj70dzlkif360cy28jry4a61cm6d81"; depends=[ade4 shapefiles sp tkrplot]; }; + adegraphics = derive2 { name="adegraphics"; version="1.0-10"; sha256="0vig5c8hmsa6xapqzb8l4sm05qw7zc5s6b796bspffxj0crg3l3v"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; }; adehabitatHR = derive2 { name="adehabitatHR"; version="0.4.15"; sha256="1bwx2mfkzfknr6fjjkbx2xnm4gksd78i8fz0bcizqyi1zhg5hd0c"; depends=[ade4 adehabitatLT adehabitatMA deldir sp]; }; adehabitatHS = derive2 { name="adehabitatHS"; version="0.3.13"; sha256="158a6qzks0hml6hk4f1vr66gvwdn09792i2ca3k23061i3j3xp75"; depends=[ade4 adehabitatHR adehabitatMA sp]; }; adehabitatLT = derive2 { name="adehabitatLT"; version="0.3.23"; sha256="0hf6wpwhsvfp906xk5sadfnvz524zmm05d0h2zxpx6089c6hnw3j"; depends=[ade4 adehabitatMA CircStats sp]; }; @@ -4100,13 +4172,13 @@ in with self; { adlift = derive2 { name="adlift"; version="1.3-3"; sha256="0q4ipk9yax4wqp3jckpx6ihriqaaaz0knxd19cm20qzdx37vz4id"; depends=[EbayesThresh]; }; admixturegraph = derive2 { name="admixturegraph"; version="1.0.2"; sha256="0ld4qyyvbnr5lz9ff64wjwif4c9xnqyjmbfgbl9bk6pia98zppl3"; depends=[doParallel dplyr foreach ggplot2 MASS neldermead pracma]; }; adnuts = derive2 { name="adnuts"; version="1.0.0"; sha256="0jy9wq269r7s70bwld6ngxc6vmaj9vplq4wn97x4f3c6lqy42swc"; depends=[ellipse rstan]; }; - ads = derive2 { name="ads"; version="1.5-2.2"; sha256="17k24dihl41jgkkglhnkj7lvvl53dgahjkb5jhfmfgk6i16c7s23"; depends=[ade4 spatstat]; }; + ads = derive2 { name="ads"; version="1.5-3"; sha256="1k1japzcf0mafxkv9dlzaqz9n4c749lsx0lja4wj327ninpdcfy4"; depends=[ade4 spatstat]; }; advclust = derive2 { name="advclust"; version="0.4"; sha256="1g8a8q4zh6d4152jb66fh7wj7k6ks5k4kfcazzw70jdn10yi6b38"; depends=[clue ggplot2 knitr MASS reshape2]; }; adwave = derive2 { name="adwave"; version="1.2"; sha256="1fnaq9v84y52kb66aq4g0xiqgllk7mi0is5qiafqf546hck3kzz6"; depends=[waveslim]; }; aemo = derive2 { name="aemo"; version="0.2.0"; sha256="11msifszq7pzmcmwibf2dk2j5dqjc74hrxdxshlprkp6p8sfhijh"; depends=[assertthat dplyr lubridate stringr]; }; afCEC = derive2 { name="afCEC"; version="1.0.2"; sha256="0jdppp93z5nb8m5qbry6cvd472mwiq1yrmm11906c3z2bfz7791f"; depends=[Rcpp RcppArmadillo rgl]; }; afc = derive2 { name="afc"; version="1.4.0"; sha256="1iy1wa88kf6zi6x7lbd0jdir653cvzvdraliqpxbac413wwb5gwl"; depends=[]; }; - afex = derive2 { name="afex"; version="0.19-1"; sha256="10qbwqwashddj93ivvwlkf3lk14411lmxp24cn7sahqr9lm714f7"; depends=[car coin emmeans lme4 lmerTest pbkrtest reshape2 stringr]; }; + afex = derive2 { name="afex"; version="0.20-2"; sha256="150zf3lzsybpj7hm3ry0x4lliscgmmxpq92iab9fbcrvaqyaibn8"; depends=[car coin emmeans lme4 lmerTest pbkrtest reshape2 stringr]; }; affluenceIndex = derive2 { name="affluenceIndex"; version="1.0"; sha256="1nb2dlsnvjsvkyrfdaskmpr3kv3qgdfb60xgmzvscfli0yf4dzr1"; depends=[]; }; afmToolkit = derive2 { name="afmToolkit"; version="0.0.1"; sha256="1pm3xyh9vq10mmfgknlvlfr9f027xprrgy1dvbbxpi7f111hv1gl"; depends=[assertthat DBI dplyr ggplot2 gridExtra minpack_lm scales tibble]; }; afpt = derive2 { name="afpt"; version="1.0.0"; sha256="0kshyzvw8sp7p686xi98g758zld3n7kq44lnvly8d0y8fg6ahcl2"; depends=[]; }; @@ -4114,7 +4186,7 @@ in with self; { agRee = derive2 { name="agRee"; version="0.5-1"; sha256="1hmqvpcz4vnpcl9f92q5fy1ca89l9sq25fnsw2mxfsa0yqbyxpw6"; depends=[coda lme4 miscF R2jags]; }; aggregation = derive2 { name="aggregation"; version="1.0.1"; sha256="0j9g604m2ccc7hcy02539yja9cf3xcbl25gvp838bp4x8w18my46"; depends=[]; }; agop = derive2 { name="agop"; version="0.1-4"; sha256="1jwyl02z053rsdw9hryv1nyj9wlq310l51fghp1p0j51c159mlpx"; depends=[igraph Matrix]; }; - agriTutorial = derive2 { name="agriTutorial"; version="0.1.2"; sha256="0zcyawmhflm4rbxnyf6gdwrnff4f13yajc81n13ykw7bfi8xphqi"; depends=[emmeans ggplot2 lattice lmerTest nlme pbkrtest]; }; + agriTutorial = derive2 { name="agriTutorial"; version="0.1.3"; sha256="1ihz92f10p7nq0rw01hka5wg2svf2hgx9f39604ab0j99z0f99hz"; depends=[emmeans ggplot2 lattice lmerTest nlme pbkrtest]; }; agricolae = derive2 { name="agricolae"; version="1.2-8"; sha256="1c6n52jralp33hl3nmpv9fc9vsvs6lcz9j75f2zbz0r4sqd2mw89"; depends=[AlgDesign cluster klaR MASS nlme spdep]; }; agridat = derive2 { name="agridat"; version="1.13"; sha256="1029n2jkbvybvkbf4pwdjrw6m05xyzn5xyqyfziqb7xnw51ksm2p"; depends=[]; }; agrmt = derive2 { name="agrmt"; version="1.40.4"; sha256="1y2gnq6b4zkxknygg73r8qrd435y7c69iqn8i56kwk1ccc1rwddx"; depends=[]; }; @@ -4126,14 +4198,16 @@ in with self; { aidar = derive2 { name="aidar"; version="1.0.5"; sha256="1q2iz2qzh2yl0v0sc537xq4vbx2nblym3kv419vr7jvrghdpx3vj"; depends=[XML]; }; aimPlot = derive2 { name="aimPlot"; version="1.0.0"; sha256="1d52b7kccxba6j7n0gbd7pzs0p87zn32vv8gdf2f7lyr75qzgz7x"; depends=[ggplot2]; }; airGR = derive2 { name="airGR"; version="1.0.9.64"; sha256="08nw07v5d5pljk839i5j5wgrc5lny7v6kl8m2hd6bm9aijql7hg4"; depends=[]; }; - aire_zmvm = derive2 { name="aire.zmvm"; version="0.5.0"; sha256="14n2wycfxpj8wb45671pysqxr434b3wgrnbx2vfpsxw46lkqid0i"; depends=[dplyr httr lubridate readr rvest sp stringr tidyr xml2]; }; + airGRteaching = derive2 { name="airGRteaching"; version="0.2.2.2"; sha256="13alnmazf8n7sgfzh0hfq6i4cd2pl414vwrakgp36q365fkgzpnc"; depends=[airGR dygraphs htmlwidgets markdown plotrix shiny shinyjs xts]; }; + aire_zmvm = derive2 { name="aire.zmvm"; version="0.6.1"; sha256="1a6aq1fkjj053mi36ibykncd1hmcl0f5c0l2fi0cbx6hcysc28ic"; depends=[dplyr httr lubridate progress readr readxl rvest sp stringr tidyr xml2]; }; ajv = derive2 { name="ajv"; version="1.0.0"; sha256="1qd5ncb7rdnnvqfknsvq9nrpxrh0zv3jyh4b91dcvfvhp262vfrm"; depends=[RJSONIO V8 yaml]; }; akima = derive2 { name="akima"; version="0.6-2"; sha256="1klprj4a2pgy5pwdwnrn3siisi2lh8hr4z6vz38sdvjkcmakxnk1"; depends=[sp]; }; akmeans = derive2 { name="akmeans"; version="1.1"; sha256="1nqbxbx583n0h2zmpy002rlmr6j86j6bg76xj5c69brrh59dpyw1"; depends=[]; }; alabama = derive2 { name="alabama"; version="2015.3-1"; sha256="0mlgk929gdismikwx4k2ndqq57nnqj7mlgvd3479b214hksgq036"; depends=[numDeriv]; }; - alakazam = derive2 { name="alakazam"; version="0.2.8"; sha256="0lilldxynwhp1i538k3xb9c73956agxj6v8zickxkba1sx4k5zrc"; depends=[dplyr ggplot2 igraph lazyeval progress Rcpp readr scales seqinr stringi]; }; + alakazam = derive2 { name="alakazam"; version="0.2.10"; sha256="0bfqc7rbchmj0dby8c8xlxff9gk18kq1v8zqfj3s7h3yddrr7znr"; depends=[dplyr ggplot2 igraph lazyeval progress Rcpp readr scales seqinr stringi]; }; + albopictus = derive2 { name="albopictus"; version="0.2"; sha256="1ils7y0i9dvhpnwyi31y7dvn02pcyn4dk0165ck81s08k96v3r1z"; depends=[]; }; ald = derive2 { name="ald"; version="1.2"; sha256="1xmvxmyc1nmsrlyr0rvzz20jx6g1f2jvxpg9f39v48ngg5gmanjj"; depends=[]; }; - alfred = derive2 { name="alfred"; version="0.1.5"; sha256="0slqmfv5nsjb463n86qf540dd8airzqc98946kbs24xmyi9npyb8"; depends=[dplyr jsonlite lubridate magrittr tibble tidyr]; }; + alfred = derive2 { name="alfred"; version="0.1.6"; sha256="07x012lj33m0pmxdwk39ywrlvlfkp7mb203dwv8v88cxplhbaiq3"; depends=[dplyr jsonlite lubridate magrittr tibble tidyr]; }; algorithmia = derive2 { name="algorithmia"; version="0.0.2"; sha256="0kly70l9si8ni8n5xm30vai70pvfvip6354scvjqj34362s0lm0a"; depends=[base64enc httr rjson xml2]; }; algstat = derive2 { name="algstat"; version="0.0.2"; sha256="1ssdrrwnxrhx3syndqxqcaldlbnjamk3x2yiq7jgxy0qsiadmqsi"; depends=[mpoly Rcpp reshape2 stringr]; }; alineR = derive2 { name="alineR"; version="1.1.4"; sha256="1gi4pl7ij60pz85yjiga5kvldraj9n3nhcyqdxrigs0cqvdwg3ar"; depends=[]; }; @@ -4148,7 +4222,7 @@ in with self; { alphahull = derive2 { name="alphahull"; version="2.1"; sha256="129b2j9j60p2wvbb8703x18pydv1g715vmjcb1a80v70i93w4f49"; depends=[ggplot2 R_utils sgeostat spatstat splancs tripack]; }; alphashape3d = derive2 { name="alphashape3d"; version="1.3"; sha256="15l8hsn3jcn5jzwfpya99v2mzrgmhl3i587nw6cx4aky75ajslcx"; depends=[geometry rgl]; }; alphavantager = derive2 { name="alphavantager"; version="0.1.0"; sha256="02vv0mks73rih4xwabsnk8rkl3cipd27k5lak9lp1rl0agp8g68v"; depends=[devtools dplyr glue httr jsonlite lubridate purrr readr stringr tibble tidyr]; }; - alr3 = derive2 { name="alr3"; version="2.0.5"; sha256="0zrrsv2kjq3cky3bhk6gp32p1qpr1i5k2lx7c1w08bql0nb1x740"; depends=[car]; }; + alr3 = derive2 { name="alr3"; version="2.0.7"; sha256="0975m657ri8ad4djrwfdv4cslw8inykq35aj5m00kmsc8gb624j0"; depends=[car]; }; alr4 = derive2 { name="alr4"; version="1.0.5"; sha256="0m8jgc4mfni17psf8m0avf0m364vcq5k3c9x807p98ch2z5nsygv"; depends=[car effects]; }; alterryx = derive2 { name="alterryx"; version="0.3.0"; sha256="0y76xy7m7dklvkhfr2czq54ffgj2j5zhnm2kza7m463j1w1mkcqz"; depends=[base64enc digest httr jsonlite]; }; altmeta = derive2 { name="altmeta"; version="2.2"; sha256="1k3p06v8ccj0dbjfpl4nw6579bwcy4j925rk15v55khqmrlx780l"; depends=[]; }; @@ -4156,11 +4230,11 @@ in with self; { ambhasGW = derive2 { name="ambhasGW"; version="0.0.2"; sha256="0v517i4whip45pk6bwlwval9pz367pcgzz62b2z22mrwgi6m6bck"; depends=[raster rgdal yaml]; }; ameco = derive2 { name="ameco"; version="0.2.8"; sha256="1i2ap11z1awalw71hai719xh57banpfgj1nllca66zf781x80di9"; depends=[]; }; amei = derive2 { name="amei"; version="1.0-7"; sha256="0dyx6a1y5i0abwka0y89d0mpj55rm5ywb4r9c2mqmy43djp181hn"; depends=[]; }; - amelie = derive2 { name="amelie"; version="0.1.0"; sha256="19cn8rhc5lzy9x9wslljjdnmli76bnam2yg5v9l87jvzb712vl6p"; depends=[]; }; + amelie = derive2 { name="amelie"; version="0.2.0"; sha256="01v93dswr9nk0kvq50jri4568w17pwkcn64xbpzn2p4c7w6gqkhh"; depends=[]; }; amen = derive2 { name="amen"; version="1.3"; sha256="1qaznfmnh3dlnp41afd37lr328qzy50hn8hi0c302wj0f992ycqg"; depends=[]; }; aml = derive2 { name="aml"; version="0.1-1"; sha256="09xxlxp784wlb561apns3j8f2h9pfk497cy5pk8wr4hhqqv4d3al"; depends=[lars]; }; ampd = derive2 { name="ampd"; version="0.2"; sha256="0bi8qngd37n60ym516yjcahxc536vdwm60rq5ld32170hww69j7c"; depends=[]; }; - amt = derive2 { name="amt"; version="0.0.2.0"; sha256="1w6rdyzyzxsa5qxmcpm1ahgz65z72nil3ay51m8g9qjk7v1xrj8p"; depends=[broom circular dplyr fitdistrplus FNN geosphere lazyeval leaflet lubridate maptools purrr raster Rcpp rgeos rlang sp survival tibble tidyr tidyverse]; }; + amt = derive2 { name="amt"; version="0.0.3.0"; sha256="1a9hvvqh7359bs2x031qgkq364d07kf60jgn13kz5nva36c5wl8v"; depends=[broom circular dplyr fitdistrplus FNN geosphere lazyeval leaflet lubridate maptools purrr raster Rcpp rgeos rlang sp survival tibble tidyr tidyverse]; }; anMC = derive2 { name="anMC"; version="0.2.0"; sha256="1j6dah49sgfsb7bj4xys5rcaqw12rrkqhqryqz2xhdkazjmz3gpq"; depends=[mvtnorm Rcpp RcppArmadillo]; }; anacor = derive2 { name="anacor"; version="1.1-3"; sha256="0mj8g9p4fla0ax9jvcq7kii4lrhj8g872p11nys06anva22qjp51"; depends=[car colorspace fda]; }; analogsea = derive2 { name="analogsea"; version="0.6.0"; sha256="1fcvf3yci3szm155pnk89q36dgc55wdlffvll642zn26zc5d1y5n"; depends=[aws_s3 httr jsonlite magrittr yaml]; }; @@ -4182,11 +4256,13 @@ in with self; { annovarR = derive2 { name="annovarR"; version="1.0.0"; sha256="0l2csp06m5f3i1b4h0pvl8mmzx25c0b411c5sdc3qszirbplh038"; depends=[AnnotationDbi BioInstaller configr data_table DBI futile_logger glue ngstk RMySQL RSQLite stringi stringr vcfR]; }; anocva = derive2 { name="anocva"; version="0.1.1"; sha256="1byg40jla71k1901js5h9yq89j63d00vkm60id1fxlpv95c4wdrr"; depends=[cluster]; }; anoint = derive2 { name="anoint"; version="1.4"; sha256="10gdqgag9pddvxh80h458gagvv1474g4pcpa71cg3h7g62rqvmv5"; depends=[glmnet MASS survival]; }; + anomalize = derive2 { name="anomalize"; version="0.1.1"; sha256="1szxjc8bh616z2xc50hcggh4ky1b7343i3xmg81rbssvkl2gghlh"; depends=[dplyr ggplot2 glue purrr rlang sweep tibble tibbletime tidyr timetk]; }; anomalyDetection = derive2 { name="anomalyDetection"; version="0.2.5"; sha256="132wb0xz04zib3x7802b2q546rkf097rsxyi9mi86g6vv7yyw9z1"; depends=[caret dplyr ggplot2 gmp magrittr MASS plyr purrr Rcpp RcppArmadillo tibble tidyr]; }; anominate = derive2 { name="anominate"; version="0.6"; sha256="01p2qkqf88bzhwywyass5r8dwg2ycflmkbzmsps7fzy0kv3xyb02"; depends=[coda MCMCpack pscl wnominate]; }; anonymizer = derive2 { name="anonymizer"; version="0.2.0"; sha256="0zlzxcqy8fjhh6ab58a1pi0k686dzgap58d160ms6bsr5mgn3fbf"; depends=[]; }; + antaresProcessing = derive2 { name="antaresProcessing"; version="0.15.1"; sha256="0x2rcj4cfw0rsyzdc98j8yk8mp8cnbpx4qj587wszxlyf90yzgfa"; depends=[antaresRead data_table]; }; antaresRead = derive2 { name="antaresRead"; version="2.1.0"; sha256="1khvwh55gfd62avaj9vl709nrcykyc4zn11fxikbqqgwm9mq7835"; depends=[data_table lubridate plyr shiny stringr]; }; - antitrust = derive2 { name="antitrust"; version="0.99"; sha256="0j76kbb8l0n3lq74nacymgilf4xzs8g1x2g1jw55v6avqnwyps6p"; depends=[BB evd ggplot2 MASS numDeriv rhandsontable shiny]; }; + antitrust = derive2 { name="antitrust"; version="0.99.7"; sha256="0si9vnbk6rcpp913cyfh5h4a5fx9kzafr5x5chb3gakzrbzz0hav"; depends=[BB evd MASS numDeriv]; }; antiword = derive2 { name="antiword"; version="1.1"; sha256="0nbx2l0d2y4qvcw4dw3m26zfkgdmav4cq0l00gib7l3y9pqxzjh5"; depends=[sys]; }; anytime = derive2 { name="anytime"; version="0.3.0"; sha256="1byhgplskj17d0gib9sajfnzyv8p9slgq1vy8fq9j2ibirl86a91"; depends=[BH RApiDatetime Rcpp]; }; aod = derive2 { name="aod"; version="1.3"; sha256="1a6xs5d5289w69xd2salsxwikjjhjzvsnplqrq78b1sr6kzfyxz3"; depends=[]; }; @@ -4194,17 +4270,18 @@ in with self; { aoos = derive2 { name="aoos"; version="0.5.0"; sha256="0y92vs27i0mkpjdclqzq4j9g1axkymhi3v8xp1v6hazh35yzjkfj"; depends=[magrittr roxygen2]; }; aop = derive2 { name="aop"; version="1.0.0"; sha256="1i3mixiwcvqygbcvj6f9vm223plmydzmixpy6nhis2zv9d90vakd"; depends=[ggplot2 graph igraph plyr Rgraphviz rjson]; }; aoristic = derive2 { name="aoristic"; version="0.6"; sha256="0b9h2l59vvrvbjjwwb43j74frvwa8lsj4x5kwhwpsfjfch1yqwjl"; depends=[classInt ggplot2 GISTools lubridate maptools MASS plotKML RColorBrewer reshape2 rgdal sp spatstat]; }; - apTreeshape = derive2 { name="apTreeshape"; version="1.4-5"; sha256="0mvnjchhfbpbnrgnplb6qxa7r2kkvw29gqiprwggkf553wi6zl48"; depends=[ape quantreg]; }; + apTreeshape = derive2 { name="apTreeshape"; version="1.5-0"; sha256="0mnydk157557pnkjvcadlghn5d8w9kxas4kwz4y4w21xg7z1jrig"; depends=[ape coda cubature pbapply quantreg]; }; apa = derive2 { name="apa"; version="0.2.0"; sha256="1f9c8m5z8j7mbmbh61vcs680ya1zq5spwqs90zhajaw5fhvlg8km"; depends=[dplyr magrittr purrr rmarkdown stringr]; }; apaStyle = derive2 { name="apaStyle"; version="0.5"; sha256="1x3kgyxhgbx3r7wi759j75wh811jcm6z559mrk4zm4p99vqz10bl"; depends=[ReporteRs]; }; apaTables = derive2 { name="apaTables"; version="2.0.2"; sha256="0b3vaknj0a9znrgr98v35ka0lf5y1wcy1x0yv249gysikncn9mjc"; depends=[boot broom car dplyr tibble]; }; + apaText = derive2 { name="apaText"; version="0.1.1"; sha256="1r217k60w027i63nbj24b1rm37m4qf7a6iirc941s945babkxcmb"; depends=[dplyr]; }; apc = derive2 { name="apc"; version="1.3"; sha256="1hgkqkvry9is8kjk2w46k637sig7fdznnc75wbrc8bq1hbrmf785"; depends=[lattice]; }; apcluster = derive2 { name="apcluster"; version="1.4.5"; sha256="0ipg5m3d7fnbvvlavbv8q8ixyrcgdspzwkv00q93f4biybza27x6"; depends=[Matrix Rcpp]; }; apdesign = derive2 { name="apdesign"; version="1.0.0"; sha256="041zyd7ih9nnj92jj9vb9ya1ij9lmj1dzx64q74vyiadw1ix5l66"; depends=[Matrix]; }; - ape = derive2 { name="ape"; version="5.0"; sha256="0q59pmxawz498cb9mv5m49lhiwxib8ak94yyydz7qg8b6lpd4bn3"; depends=[lattice nlme Rcpp]; }; + ape = derive2 { name="ape"; version="5.1"; sha256="0vm2065993wf4hdqarxqykhfz9aaj0rrb98alhkq4qw1d2kdrmdp"; depends=[lattice nlme Rcpp]; }; apercu = derive2 { name="apercu"; version="0.2.3"; sha256="0w9hi8pdjb3nschh4cy387q67jxhkl2bn9vir949rsl831x4cs1j"; depends=[pls]; }; apex = derive2 { name="apex"; version="1.0.3"; sha256="157i67yvb9xqlhzcgkxj7n5lq65svxs82z38dv2c0k8p4krjl1pd"; depends=[adegenet ape phangorn]; }; - aphid = derive2 { name="aphid"; version="1.0.1"; sha256="1s41ph6i28l14h8s5vvgmx6kby378x27y3vwbz25f2jmq8i7fqi2"; depends=[openssl phylogram Rcpp]; }; + aphid = derive2 { name="aphid"; version="1.1.0"; sha256="0mf2v7b915hpasic2yqxi0g5fcrwac4d1ycikwzcd9hb9qngcb0n"; depends=[kmer openssl Rcpp]; }; aplore3 = derive2 { name="aplore3"; version="0.9"; sha256="0af6klscsxvh4amp519b6r41bzysf61p040fj4l5706bbya1arhw"; depends=[]; }; aplpack = derive2 { name="aplpack"; version="1.3.0"; sha256="0i6jy6aygkqk5gagngdw9h9l579lf0qkiy5v8scq5c015w000aaq"; depends=[]; }; apmsWAPP = derive2 { name="apmsWAPP"; version="1.0"; sha256="1azgif06dsbadwlvv9nqs8vwixp6balrrbpj62khzmv1jvqr4072"; depends=[aroma_light Biobase DESeq edgeR genefilter gtools multtest seqinr]; }; @@ -4222,13 +4299,13 @@ in with self; { apt = derive2 { name="apt"; version="2.5"; sha256="1y18bqnnxy5p0xx9gbfrnrzq3nlhw3psl5zlibrw6lfhb8lxd4mk"; depends=[car copula erer gWidgets urca]; }; aptg = derive2 { name="aptg"; version="0.1.0"; sha256="06z8041h1k9v0ymd7azn11xzhqxb8lda4r7nyg51h8z3i8mpq1ba"; depends=[ape brranching phytools taxize xml2]; }; aqfig = derive2 { name="aqfig"; version="0.8"; sha256="0ha0jb5ag3zx6v7c63lsm81snslzb8y8g565mxjmf7vxpcmzzqsi"; depends=[geoR]; }; - aqp = derive2 { name="aqp"; version="1.15"; sha256="0hgz2m3nn45marvx49n62xmq1d1xhy9cf6wb829cvxczisvlakgy"; depends=[cluster digest Hmisc lattice MASS plotrix plyr RColorBrewer reshape scales sp stringr]; }; + aqp = derive2 { name="aqp"; version="1.16"; sha256="11ksjvvwazan2xk535ygrk8qs66ny6fywfgw2mpy8kv2637l9pay"; depends=[cluster digest Hmisc lattice MASS plotrix plyr RColorBrewer reshape scales sp stringr]; }; aqr = derive2 { name="aqr"; version="0.4"; sha256="04frgil3nbxsww66r9x0c6f308pzqr1970prp20bdv9qm3ym5axw"; depends=[RCurl xts]; }; arabicStemR = derive2 { name="arabicStemR"; version="1.2"; sha256="1vflynbi7aln7x2p4jg9gsvfrxn4v6qkb4wbrzxmj561lqy9fcay"; depends=[]; }; - arc = derive2 { name="arc"; version="1.1.4"; sha256="1qzj5bzn2dfssjz1r464ys7c0wab0la23hcrbjbmn93iqm2a648g"; depends=[arules discretization Matrix R_utils]; }; + arc = derive2 { name="arc"; version="1.2"; sha256="1advs0aqxh84c5n9akww8cdafh7npgaibrb42wncwhv9nfi7wy1v"; depends=[arules discretization Matrix R_utils]; }; archdata = derive2 { name="archdata"; version="1.2"; sha256="0igh6qy3yv5hzprj9izpkqp3f6jkb7pydqzmnl8sqhqjqvb3lnij"; depends=[]; }; archetypes = derive2 { name="archetypes"; version="2.2-0"; sha256="1djzlnl1pjb0ndgpfj905kf9kpgf9yizrcvh4i1p6f043qiy0axf"; depends=[modeltools nnls]; }; - archiDART = derive2 { name="archiDART"; version="3.0"; sha256="0yh9asf45l2fxxm67vg9snaqbvs1bb24lm2xsrb6xrr62avdrqlq"; depends=[rgl sp TDA XML]; }; + archiDART = derive2 { name="archiDART"; version="3.2"; sha256="08jam0nbqvrgrxjqj24k7f0dybyi935w977yi1qk34q1p48462ph"; depends=[rgl sp XML]; }; archivist = derive2 { name="archivist"; version="2.3"; sha256="0rwdk2scmd06j428zadcxmvshvssf421265632595hvcacqz6yy4"; depends=[DBI digest httr lubridate magrittr RCurl RSQLite]; }; archivist_github = derive2 { name="archivist.github"; version="0.2.2"; sha256="04xb2i47y12ic87gb2l30bldil0505h7s9601hq0afjg3npx6jq7"; depends=[archivist digest git2r httr jsonlite]; }; areaplot = derive2 { name="areaplot"; version="1.2-0"; sha256="0xzfgbnzqsvnq46nsxwyqrwldbaqns3h5np0f5wxpjda9cy2rna1"; depends=[]; }; @@ -4239,9 +4316,9 @@ in with self; { argparse = derive2 { name="argparse"; version="1.1.1"; sha256="0fzrbj87b274vf96azdnsjxk2nf45d5wy58vzmlah4b4h7q4j524"; depends=[findpython getopt jsonlite proto]; }; argparser = derive2 { name="argparser"; version="0.4"; sha256="0s1wxshx4jk69wfxhycx973q6y8cmqrfymyjklhq1i8xrj0kmmx9"; depends=[]; }; ari = derive2 { name="ari"; version="0.1.0"; sha256="05pva8jp7dhl46dm1fha6f8mavrs76a6c491fq3mavly8qcbgx44"; depends=[aws_polly progress purrr rmarkdown rvest tuneR webshot xml2]; }; - arm = derive2 { name="arm"; version="1.9-3"; sha256="00773z8ai07s9wa2annzjqrxml3z13fh9zqls0z1n7s3h8fwrvqw"; depends=[abind coda lme4 MASS Matrix nlme]; }; + arm = derive2 { name="arm"; version="1.10-1"; sha256="0vvp90jygajd6ydky57z66wqjq9msfbl88irj5jbsray574mh4bg"; depends=[abind coda lme4 MASS Matrix nlme]; }; arnie = derive2 { name="arnie"; version="0.1.2"; sha256="14xkgyfn9zvkbgram15w7qzqc5pl1a8ig66cif7a79najrgd914r"; depends=[]; }; - aroma_affymetrix = derive2 { name="aroma.affymetrix"; version="3.1.0"; sha256="1slbmqr0qd8r9lrms7b86fhvn612g4yjbm604zahjr335q6d7h03"; depends=[aroma_apd aroma_core future listenv MASS matrixStats R_cache R_devices R_filesets R_methodsS3 R_oo R_utils]; }; + aroma_affymetrix = derive2 { name="aroma.affymetrix"; version="3.1.1"; sha256="1x2lwdabvh7cjdy57jrnbdb7s9vxs18zyvfzwavi2pgldqz6v2aw"; depends=[aroma_apd aroma_core future listenv MASS matrixStats R_cache R_devices R_filesets R_methodsS3 R_oo R_utils]; }; aroma_apd = derive2 { name="aroma.apd"; version="0.6.0"; sha256="1l9p5qww71h6wlg2z15wirsfz2i7hmf637l17zaf3n7fp9s3flc7"; depends=[R_huge R_methodsS3 R_oo R_utils]; }; aroma_cn = derive2 { name="aroma.cn"; version="1.6.1"; sha256="1d9g81b12a3m03wrvb3cvg33fjybgiabpxhci2y2rr6diay42pmr"; depends=[aroma_core matrixStats PSCBS R_cache R_filesets R_methodsS3 R_oo R_utils]; }; aroma_core = derive2 { name="aroma.core"; version="3.1.1"; sha256="0mbhk818m8if6cr7g42yy7ba13jh2xs66xkx4zh7dqlwrrmgjnk1"; depends=[future listenv matrixStats PSCBS R_cache R_devices R_filesets R_methodsS3 R_oo R_rsp R_utils RColorBrewer]; }; @@ -4249,9 +4326,9 @@ in with self; { arrangements = derive2 { name="arrangements"; version="1.0.2"; sha256="0vqxx0pzvvqnbklpxrcq7d5ppicwbwk3gb2846in0gqjhn4ya4g1"; depends=[gmp R6]; }; arrayhelpers = derive2 { name="arrayhelpers"; version="1.0-20160527"; sha256="1ib91hpg6xgy0jr4sb8ib19x0v4f5n96lak0qm0z5vksawgcnp1l"; depends=[svUnit]; }; ars = derive2 { name="ars"; version="0.5"; sha256="0m63ljb6b97kmsnmh2z5phmh24d60iddgz46i6ic4rirshq7cpaz"; depends=[]; }; - arsenal = derive2 { name="arsenal"; version="1.0.0"; sha256="0fv3zq0i28sbdvwh589c27j4k734vr90aik3gxdablgasrhdjfza"; depends=[testthat]; }; + arsenal = derive2 { name="arsenal"; version="1.2.0"; sha256="1glh8vyms5hcplzzn5n6fynr8jyryy65xb2y9lf6nv7kziwqr5fk"; depends=[testthat]; }; artfima = derive2 { name="artfima"; version="1.5"; sha256="1nqsq9fsqk9kag9n7i2r9yvf578nkdfrkkv7qy8650prka0jca2p"; depends=[gsl ltsa]; }; - arules = derive2 { name="arules"; version="1.6-0"; sha256="14gbq5k2zkx4wc7kkfazz313ngij89qp1xmyxfg3nq3v1s84c3sl"; depends=[Matrix]; }; + arules = derive2 { name="arules"; version="1.6-1"; sha256="0glfqgxr87900kigmkby2ff7qrjvd6aq595q85y056i5ckjcp615"; depends=[Matrix]; }; arulesCBA = derive2 { name="arulesCBA"; version="1.1.3"; sha256="0dpa9v8xksq21lyv6g7m81ccpd08lq816vfy5ga8g3blkg1qfrf2"; depends=[arules caret discretization Matrix testthat]; }; arulesNBMiner = derive2 { name="arulesNBMiner"; version="0.1-5"; sha256="1q4sx6c9637kc927d0ylmrh29cmn4mv5jxxpl09yaclzfihjlk9a"; depends=[arules rJava]; }; arulesSequences = derive2 { name="arulesSequences"; version="0.2-19"; sha256="1cncvrf7za38b3vdwbzy4yrbakj7jbpxrl1jg6bvjnlkymiajavx"; depends=[arules]; }; @@ -4269,7 +4346,7 @@ in with self; { ashr = derive2 { name="ashr"; version="2.2-7"; sha256="1bgkzab7f7fqi259vxrpkxq8yzhh1sl3mqdzc73dk54c5849b2pz"; depends=[assertthat doParallel etrunct foreach Matrix pscl Rcpp SQUAREM truncnorm]; }; asht = derive2 { name="asht"; version="0.9.3"; sha256="075gzxly8sqkbwnznxcr4z3zs1qvlyl8c4ishgxk035ik1w6p16n"; depends=[bpcp coin exact2x2 exactci perm ssanv]; }; aslib = derive2 { name="aslib"; version="0.1"; sha256="0dkb6bb6dqavjklbciqxqhi3fdqib9asdnhiap2gp9b9wfnkyq7k"; depends=[BatchExperiments BatchJobs BBmisc checkmate corrplot ggplot2 llama mlr parallelMap ParamHelpers plyr reshape2 RWeka stringr yaml]; }; - asnipe = derive2 { name="asnipe"; version="1.1.8"; sha256="10pza52bcfdj9412hr69lcv4n43y0n91hfkbq8338fsqpad98ilz"; depends=[MASS Matrix]; }; + asnipe = derive2 { name="asnipe"; version="1.1.9"; sha256="0r6hajdvasvik2ij58xm5kvlcz2gqzgqbvw0ypghrp0qkfqxkrla"; depends=[MASS Matrix]; }; aspace = derive2 { name="aspace"; version="3.2"; sha256="1g51mrzb6amafky2kg2mx63g6n327f505ndhna6s488xlsr1sl49"; depends=[Hmisc shapefiles splancs]; }; aspect = derive2 { name="aspect"; version="1.0-4"; sha256="1kxddm8v1y0v2r7lg24r1wpzk7lqzxlrpzq5xb9kn343g53lny6i"; depends=[]; }; aspi = derive2 { name="aspi"; version="0.2.0"; sha256="0rhvxw243vvdv3hxa6pi343gcjc2cbxq1jzqirl9k1l4i3897l87"; depends=[]; }; @@ -4293,7 +4370,7 @@ in with self; { assertive_types = derive2 { name="assertive.types"; version="0.0-3"; sha256="0zxq1jfrzgw95ll7alvm0xnk7aihjdksngq4ya2whyvfjbmv4vdb"; depends=[assertive_base assertive_properties codetools]; }; assertr = derive2 { name="assertr"; version="2.5"; sha256="17j5aw19cp9csbxhf277yrr4vlr2c5sk70v9a4fnch0c2q14l5f3"; depends=[dplyr lazyeval MASS rlang]; }; assertthat = derive2 { name="assertthat"; version="0.2.0"; sha256="1wp5znk3xy338x6hknppk702jn596yr735d9i7c3wabm3sdzfgnp"; depends=[]; }; - assignPOP = derive2 { name="assignPOP"; version="1.1.3"; sha256="12ldcm1v1s311n3c9sysaw5ba2z8yrzrf95rl7ip6fl2q8g0fv6b"; depends=[caret doParallel e1071 foreach ggplot2 MASS randomForest reshape2 stringr tree]; }; + assignPOP = derive2 { name="assignPOP"; version="1.1.4"; sha256="1w13ls4d7gvp17dz0jafwnw9kqn3kl670vs0wf50rladg2fmh7af"; depends=[caret doParallel e1071 foreach ggplot2 MASS randomForest reshape2 stringr tree]; }; assist = derive2 { name="assist"; version="3.1.3"; sha256="0ngnn75iid5r014fcly29zhcfpqkqq24znncc3jdanbhdmfyybyz"; depends=[lattice nlme]; }; assocInd = derive2 { name="assocInd"; version="1.0.1"; sha256="16yzgvlqbapjhvzm5nw8vfrhh8mp9llnhck4bpgmszyrh93z1ha5"; depends=[]; }; assortnet = derive2 { name="assortnet"; version="0.12"; sha256="1vyzrb8vsi9pcdn6jd83k77bg0q2a3dwdvlnmxnshqiif2pakb8m"; depends=[]; }; @@ -4324,10 +4401,11 @@ in with self; { audiolyzR = derive2 { name="audiolyzR"; version="0.4-9"; sha256="09jsrjy15vcn6da0kgk06ghayyrf3s853gqv8qdawg745ky2hbgi"; depends=[hexbin plotrix RJSONIO]; }; audit = derive2 { name="audit"; version="0.1-1"; sha256="0hrcdcwda5c0snskrychiyfjcbnymkcl2x43bapb6inw9y8989qv"; depends=[]; }; augSIMEX = derive2 { name="augSIMEX"; version="1.0"; sha256="1d13kh9xfkpwy2285awhvgfkwyqlsdk2bypm0i1jjf10avrynxvf"; depends=[MASS Rcpp rootSolve]; }; - auk = derive2 { name="auk"; version="0.1.0"; sha256="042yygs00vya9xynl2i9bwhwwns3ba25ajp5zlgpv1zw6csby9ml"; depends=[assertthat countrycode dplyr rlang stringi stringr tidyr]; }; + auk = derive2 { name="auk"; version="0.2.1"; sha256="18vqvjksnllbkwfskiv8cv0dbw92nzkxwb0rj14sxxw8y55hybyy"; depends=[assertthat countrycode dplyr rlang stringi stringr tidyr]; }; aurelius = derive2 { name="aurelius"; version="0.8.4"; sha256="00bpf9sggvnajpmg3zsdgfjinkb6wbrcf1ris7qfhh1rp5rz4m4m"; depends=[gbm glmnet jsonlite]; }; auto_pca = derive2 { name="auto.pca"; version="0.3"; sha256="01m2ldpcxzj7fhgmr9wp4ha3gqdyh7l5bkrnw83smcbq5229hsyy"; depends=[plyr psych]; }; autoBagging = derive2 { name="autoBagging"; version="0.1.0"; sha256="01k44rgkpbbr3m2x360aq0fz2qi7nz036g5dsh2y3jy94rmddbyy"; depends=[abind caret cluster CORElearn e1071 entropy infotheo lsr MASS minerva party rpart xgboost]; }; + autoFRK = derive2 { name="autoFRK"; version="1.0.0"; sha256="10vmgcpj2n5w9g4bjq2g3bz3n3x9b6h35w4qfr13v2sdzp3gz5da"; depends=[fields filehash filehashSQLite filematrix FNN LatticeKrig MASS Rcpp RcppEigen RcppParallel RSpectra spam]; }; autoSEM = derive2 { name="autoSEM"; version="0.1.0"; sha256="0s58dnpr7zyclk5vwaf7a2id6paqsnb224f0gpmj2nms4klsw323"; depends=[GA lavaan snowfall]; }; autoencoder = derive2 { name="autoencoder"; version="1.1"; sha256="0ly1aanayk28nx6yqfhl7d0zm4vg6rfjikf5ibn8zhmkrfyflj1y"; depends=[]; }; autoimage = derive2 { name="autoimage"; version="2.0"; sha256="102f7wkrglsvdrsmyy79v0w7za5b79sn59czxzhriwrp4mrpdl47"; depends=[fields ggplot2 mapproj maps MBA viridisLite]; }; @@ -4336,22 +4414,25 @@ in with self; { automultinomial = derive2 { name="automultinomial"; version="1.0.0"; sha256="15cxnqaai2dln6jvk7lpfqvlpv5237zn18axp459p5zxcgg0lw88"; depends=[Hmisc igraph MASS Matrix]; }; autoplotly = derive2 { name="autoplotly"; version="0.1.1"; sha256="1pm1760dd9p0h66q7y1v9icfhz1lk6i5akjda06jc2f0rq7mzlj0"; depends=[ggfortify ggplot2 plotly]; }; autopls = derive2 { name="autopls"; version="1.3"; sha256="1qf5gk1vsz1p5670w7bgzh3b15wvrx1gy6ih4sivw0vj8bcjxbw9"; depends=[pls]; }; - autothresholdr = derive2 { name="autothresholdr"; version="1.1.2"; sha256="0gkab2fnavjfb7h2fd2jbk5phz10hc18kf3l6r2zvvmq3gfhh2db"; depends=[checkmate ijtiff magrittr Rcpp RSAGA]; }; + autothresholdr = derive2 { name="autothresholdr"; version="1.2.0"; sha256="09wpyirsqw0s4b5221ksr0v0srrq24c6ca8kr5m4hr4ps728np0p"; depends=[checkmate filesstrings ijtiff magrittr Rcpp]; }; autovarCore = derive2 { name="autovarCore"; version="1.0-2"; sha256="0yvz3nn792xdam8hgnkdrhcyaf9idp0shb1s0yfj1xigknlinn9n"; depends=[Amelia jsonlite Rcpp urca vars]; }; available = derive2 { name="available"; version="1.0.0"; sha256="0w4i0ajw0p71k717v8hg9d8az08m8yl97w5lly87kli36p7mv30h"; depends=[cli clisymbols crayon desc glue jsonlite memoise purrr SnowballC stringdist tibble tidytext udapi yesno]; }; averisk = derive2 { name="averisk"; version="1.0.3"; sha256="02j27d4jxgy2bk5sgxp1xdfyqr321civs99qj0g8cp34gwqk0j3m"; depends=[MASS]; }; aws = derive2 { name="aws"; version="1.9-6"; sha256="0mfq44pji0p6d7s1wbwi0f97lsh3f33wnj8fiyimpg9fv8lr4inz"; depends=[awsMethods gsl]; }; - aws_alexa = derive2 { name="aws.alexa"; version="0.1.4"; sha256="1dqfmmmvdmlpk9ld563f65chwp2ahhlnrvbzsj9m5rfjs0bw6yny"; depends=[aws_signature httr plyr XML]; }; + aws_alexa = derive2 { name="aws.alexa"; version="0.1.6"; sha256="0c2yl023g2m4kqhhv4nbysjmp103aj3pk17dwyb9nrkpj9qm8zsh"; depends=[aws_signature dplyr httr xml2]; }; aws_cloudtrail = derive2 { name="aws.cloudtrail"; version="0.1.5"; sha256="0p7qj9ivs14ska11a9qni4n0f8d05c1p126zvlxj9038c9p0y1wx"; depends=[aws_s3 aws_signature httr jsonlite]; }; - aws_ec2metadata = derive2 { name="aws.ec2metadata"; version="0.1.2"; sha256="1ycxir3l7jcnxp6hdpr3zqf885hl8zb1yvjyr09cq3ql82vi95ml"; depends=[curl jsonlite]; }; + aws_comprehend = derive2 { name="aws.comprehend"; version="0.1.2"; sha256="0480ggfdmcv2pkjzmwh40h4nd87qswrpwr6h3j959f9y8zmzfd7n"; depends=[aws_signature httr jsonlite]; }; + aws_ec2metadata = derive2 { name="aws.ec2metadata"; version="0.1.4"; sha256="08l1gnqn2l6f6rkh21v1my2jp5bbzwnq38swymwl94jbnvnlrasw"; depends=[curl jsonlite]; }; aws_iam = derive2 { name="aws.iam"; version="0.1.7"; sha256="0hag8j5g8rqg39x4f6d8vwwzhz98cx7549xixfl9cxiff7x9sz2c"; depends=[aws_signature httr jsonlite xml2]; }; aws_lambda = derive2 { name="aws.lambda"; version="0.1.6"; sha256="16vis596clxn6h9j1k66224ikacsg0f9xrzqi5987nqlzrwskjgk"; depends=[aws_signature base64enc httr jsonlite]; }; aws_polly = derive2 { name="aws.polly"; version="0.1.2"; sha256="0ij0rbng8q7xfa08p4x1l1lcmskmz3fy2pvln28zxqbs6jbc22rm"; depends=[aws_signature httr jsonlite tuneR]; }; - aws_s3 = derive2 { name="aws.s3"; version="0.3.3"; sha256="1vk4ykgfdyfispd9nkk1qc1jjhvjhxqzhd48g5ddqz09wm0wx4w3"; depends=[aws_signature base64enc digest httr xml2]; }; + aws_s3 = derive2 { name="aws.s3"; version="0.3.11"; sha256="0zb219xib86980gq00sam804m91448lsmcy4a3ac322sifmrpasc"; depends=[aws_signature base64enc digest httr xml2]; }; aws_ses = derive2 { name="aws.ses"; version="0.1.4"; sha256="13hf4iqhnpkm9rnr7nzwky663vplnkjrgk90zix91cn2fvaspjgp"; depends=[aws_signature httr jsonlite]; }; - aws_signature = derive2 { name="aws.signature"; version="0.3.5"; sha256="1ijzdxv46x5iydmhgbri4lfpdhhlhz1ybhwwdcy4m4mjz9s74yhk"; depends=[base64enc digest]; }; + aws_signature = derive2 { name="aws.signature"; version="0.4.1"; sha256="094d0jwg6433bdfkvs3r9mjvg61k78ff4ck0zhgyaz4aivlchm9j"; depends=[base64enc digest]; }; aws_sns = derive2 { name="aws.sns"; version="0.1.7"; sha256="0i8nn5jnykhsjwn4nsqdqbagankjc09zs8and54rkirdigzdny8v"; depends=[aws_signature httr jsonlite xml2]; }; aws_sqs = derive2 { name="aws.sqs"; version="0.1.10"; sha256="09sh3injb4kfrq5al7hmbnqdn5v5hnjkqqsz86vpi4154435ymdg"; depends=[aws_signature httr jsonlite xml2]; }; + aws_transcribe = derive2 { name="aws.transcribe"; version="0.1.2"; sha256="12qz7j535aqxcvcawj4iqycbcmlba32sdl8qj2cw6rq5rgm55xaz"; depends=[aws_signature httr jsonlite]; }; + aws_translate = derive2 { name="aws.translate"; version="0.1.3"; sha256="0qr38f2ywrmccg0k080lhfvvf9zkmclvpmfcwjizls6qkwfww3il"; depends=[aws_signature httr jsonlite]; }; awsMethods = derive2 { name="awsMethods"; version="1.1-0"; sha256="1xywcadpjyzlw5f2k9sbr8fvrj3kcr1r6swi23lc952yrl3gvpkl"; depends=[]; }; awsjavasdk = derive2 { name="awsjavasdk"; version="0.2.0"; sha256="1461h565il4y68g0a3k7wgn9jyb6pys8405f780ldg6g44aa7p60"; depends=[assertthat R_utils rappdirs rJava]; }; awspack = derive2 { name="awspack"; version="0.1.6"; sha256="0pf6g9w2r2rm887sa3v0gfwia2w2q94m40m76sq66gb3spkmngd5"; depends=[aws_alexa aws_cloudtrail aws_ec2metadata aws_iam aws_lambda aws_polly aws_s3 aws_ses aws_signature aws_sns aws_sqs]; }; @@ -4359,7 +4440,7 @@ in with self; { b6e6rl = derive2 { name="b6e6rl"; version="1.1"; sha256="17scdskn677vaxx1h2jypqaffvjgczryplg17nr3wigi1x0cxg7a"; depends=[]; }; bPeaks = derive2 { name="bPeaks"; version="1.2"; sha256="1z6jghcmw0lwv17ms7gdp5zzimaawq3ahbwkxa4062g373592smd"; depends=[]; }; bReeze = derive2 { name="bReeze"; version="0.4-2"; sha256="04zapsxb4lsi85m9qgrsm49yasf0b8wk0djdpa7xks4hjvmskfhq"; depends=[]; }; - bWGR = derive2 { name="bWGR"; version="1.5.1"; sha256="0dkpj9xskflnhqr92bi54cg3qckjja1jj5vjypzijikwqimz879h"; depends=[Rcpp]; }; + bWGR = derive2 { name="bWGR"; version="1.5.2"; sha256="1ijz72zxxykscbsr4n1k66zjcy6zs9azgdyf2s5w8j291zy43gw6"; depends=[Rcpp]; }; babar = derive2 { name="babar"; version="1.0"; sha256="13j5klrcnd4dwrgdbxlvwcj56l9mzi4j9ga6jj5i04pgdc6vsfx5"; depends=[]; }; babel = derive2 { name="babel"; version="0.3-0"; sha256="1iwvx69051yhlxbcl6bypvc3mcih0q8bf3i29r3i79356hp12xqa"; depends=[edgeR]; }; babynames = derive2 { name="babynames"; version="0.3.0"; sha256="018wyajdkpvcywcvkna57m5sqnsh7i9zq2hqlyb8q93mgyb3ddzm"; depends=[tibble]; }; @@ -4372,12 +4453,12 @@ in with self; { badgecreatr = derive2 { name="badgecreatr"; version="0.1.0"; sha256="070zb5jw817s9ykqc3dvzjqk48612gydkdc31svc0ji01s1y1545"; depends=[stringr]; }; badger = derive2 { name="badger"; version="0.0.2"; sha256="15qnb0a6rqsf1dbb1cf9ag2z5f4zhf8b8psxbsdhh42qrg8g3mma"; depends=[dlstats rvcheck]; }; bagRboostR = derive2 { name="bagRboostR"; version="0.0.2"; sha256="1k9w98p3ad3myzyqhcrc4rsn7196qvhnmk5ddx3fpd1rdvy2dnby"; depends=[randomForest]; }; - bairt = derive2 { name="bairt"; version="0.1.1"; sha256="1i0y7bkhx0rsv93j32i2v3g2h3csxvnkkkx9kvkdnkcwzffps5x2"; depends=[coda mvtnorm shiny shinyjs]; }; + bairt = derive2 { name="bairt"; version="0.1.2"; sha256="17nc0lp0bzwshik33v0gq5d6nd2gvm4799b7rfiq089zhnzv90kj"; depends=[coda mvtnorm shiny shinyjs]; }; baitmet = derive2 { name="baitmet"; version="1.0.1"; sha256="02ydakqr8v41hdnhcsgigwnic8d48qswryg1srb5w1fqdmdglnkl"; depends=[erah HiClimR Rcpp signal XML]; }; - ballr = derive2 { name="ballr"; version="0.1.1"; sha256="1n2kaindpr6ba2fc1zvkl78jxl24y1gxn9dxv10c8m594l8shbxw"; depends=[dplyr janitor lubridate magrittr rlang rvest xml2]; }; + ballr = derive2 { name="ballr"; version="0.2.0"; sha256="1f5fclmgp0pznahr3ix7xiixqah01jmh2g6fvrqyi6xcin8ynwqc"; depends=[dplyr janitor lubridate magrittr rlang rvest xml2]; }; bamboo = derive2 { name="bamboo"; version="0.9.19"; sha256="1k81r06kw50w6lm0vi6xwjymc4l13abagrn5b6czcyki3i6pwqc2"; depends=[rscala]; }; bamdit = derive2 { name="bamdit"; version="3.1.0"; sha256="148ikj7mly8m6kxs2n4gidi7kb70i3x2vbf9xsllrf0cgvrjccps"; depends=[ggExtra ggplot2 gridExtra MASS R2jags rjags]; }; - bamlss = derive2 { name="bamlss"; version="0.1-2"; sha256="1d5pinyq16y0ljjgf23mpabzpsx4n2vh91c89qmzclcw7ns0l7xw"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm sp spam survival]; }; + bamlss = derive2 { name="bamlss"; version="1.0-0"; sha256="0wa54f5zyjyplys29cqhrasc6qa8p5znfal2ihp0qhhs46wzsk4y"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm sp survival]; }; banR = derive2 { name="banR"; version="0.2.0"; sha256="0m71m99f8f4wckylry6z16gw6r2cc4wxbd9287ns00jr6s13x6c8"; depends=[dplyr httr magrittr purrr readr rlang stringr tibble]; }; bandit = derive2 { name="bandit"; version="0.5.0"; sha256="03mv4vbn9g4mqikd9map33gmw2fl9xvb62p7gpxs1240w5r4w3fp"; depends=[boot gam]; }; bang = derive2 { name="bang"; version="1.0.0"; sha256="16wy2imrdvhpdzi6ix9k69afqdyc44d1xr655yd3q1cl12x1nr04"; depends=[bayesplot rust]; }; @@ -4385,28 +4466,29 @@ in with self; { banxicoR = derive2 { name="banxicoR"; version="0.9.0"; sha256="0vchm2hnqm45fhn8k38rcam4vkazmifcl40390s2r04bgvqr0pnl"; depends=[rvest stringr xml2]; }; bapred = derive2 { name="bapred"; version="1.0"; sha256="08kvc4cc984jv08ikwbja8zxidrcdiwi5w88hlqakbm8yc6hzssa"; depends=[affy affyPLM Biobase FNN fuzzyRankTests glmnet lme4 MASS mnormt sva]; }; barcode = derive2 { name="barcode"; version="1.1"; sha256="14zh714cwgq80zspvhw88cs5b82gvz4b6yfbshj9b7x0y2961nxd"; depends=[lattice]; }; - bartMachine = derive2 { name="bartMachine"; version="1.2.4"; sha256="09w3gb7lh12ls8hmmnssvmlmp3lkbr2j0jqdihfb6049cgl31m60"; depends=[bartMachineJARs car missForest randomForest rJava]; }; + bartMachine = derive2 { name="bartMachine"; version="1.2.4.1"; sha256="0awshy5djs6f6v77g9f4xcmg9pg3zs650bzql3nvfxw5d0zdnbzb"; depends=[bartMachineJARs car missForest randomForest rJava]; }; bartMachineJARs = derive2 { name="bartMachineJARs"; version="1.1"; sha256="1wpfzrb6mrx3xmxy4rgnwygmpqq2l4ki2xqr4m51g1bl9nwirhzj"; depends=[rJava]; }; basad = derive2 { name="basad"; version="0.2.0"; sha256="1qc2amkrjrgdqys275p82lmbpjszm5rzjdpri7hqc9d8b8q1vc9q"; depends=[Rcpp RcppEigen rmutil]; }; + base2grob = derive2 { name="base2grob"; version="0.0.2"; sha256="0mknr1kdy2vpa8cj18crr98sp22qj27bb1g3mrm64azchsqr5k64"; depends=[gridGraphics]; }; base64 = derive2 { name="base64"; version="2.0"; sha256="1labh0ycdm2xcjssj8bhnyjvbk44mcdsi0rb2p8rfqa428mrq9cf"; depends=[openssl]; }; base64enc = derive2 { name="base64enc"; version="0.1-3"; sha256="13b89fhg1nx7zds82a0biz847ixphg9byf5zl2cw9kab6s56v1bd"; depends=[]; }; base64url = derive2 { name="base64url"; version="1.3"; sha256="1azik4yqafay4m2panbnyyf7cq5qb2qjv74ikhb8rljbsgv2xchd"; depends=[backports]; }; baseballDBR = derive2 { name="baseballDBR"; version="0.1.2"; sha256="0w54g1avcqamc12lmvjchlqbqck9jfjccm441k03nsql460mpydq"; depends=[dplyr magrittr rvest xml2]; }; - basefun = derive2 { name="basefun"; version="1.0-0"; sha256="1a2ksmxki1jg0g9359zxzxignpcz7lcahqf6k3nclv7s0p22vb42"; depends=[Matrix orthopolynom polynom variables]; }; + basefun = derive2 { name="basefun"; version="1.0-1"; sha256="0qiszm71alh7p3inhiv9prdl4f5l45ny8plz2fm7l5h51z5xj54r"; depends=[Matrix orthopolynom polynom variables]; }; baseline = derive2 { name="baseline"; version="1.2-1"; sha256="1vk0vf8p080ainhv09fjwfspqckr0123qlzb9dadqk2601bsivgy"; depends=[SparseM]; }; basicTrendline = derive2 { name="basicTrendline"; version="1.0.1"; sha256="0rsmlp70ylpkqv437jcy3skwbfkj4xwkpjb2q79b9n8kw2ir0716"; depends=[]; }; basicspace = derive2 { name="basicspace"; version="0.20"; sha256="0nyljk8ydasirgv7ijxplyhk10s8m9k3rw5qmgf0z81dm7p257wc"; depends=[]; }; basictabler = derive2 { name="basictabler"; version="0.1.0"; sha256="1m4cgghfh3aixsnwjlbaj3prnnqxhij60bakz9vdr5dvnqg92an9"; depends=[dplyr htmltools htmlwidgets jsonlite R6]; }; bastah = derive2 { name="bastah"; version="1.0.7"; sha256="08xdba16wj0inp0kq2sbcrdr6wj8bwlq7rqnfrzjrz03wxhc5bk0"; depends=[BigQuic foreach glmnet lars MASS Matrix scalreg]; }; batade = derive2 { name="batade"; version="0.1"; sha256="1lr0j20iydh15l6gbn471vzbwh29n58dlpv9bcx1mnsqqnsgpmal"; depends=[hwriter]; }; - batch = derive2 { name="batch"; version="1.1-4"; sha256="03v8a1hsjs6nfgmhdsv6fhy3af2vahc67wsk71wrvdxwslmn669q"; depends=[]; }; + batch = derive2 { name="batch"; version="1.1-5"; sha256="0wdgfvk2i542cqg34ikvzwlix09f2jyjb32a0f4zh9vg9nrywswq"; depends=[]; }; batchmeans = derive2 { name="batchmeans"; version="1.0-3"; sha256="1qkdljngvlahk0pbrkarkjh2g4sxxwiva9f3m5y8gz8pjw9fpy9n"; depends=[]; }; batchtools = derive2 { name="batchtools"; version="0.9.8"; sha256="1ch03hj8ahkfc9sr4gv985s6zzxk5xm2dbm0hm8xjygkqkd8r5n9"; depends=[backports base64url brew checkmate data_table digest progress R6 rappdirs stringi withr]; }; batman = derive2 { name="batman"; version="0.1.0"; sha256="0ccgx506p4iri23k2ikb8jmh04dp08w66785bv52iy8kd359h43f"; depends=[Rcpp]; }; batteryreduction = derive2 { name="batteryreduction"; version="0.1.1"; sha256="0j838q7063bplkzd50kmnxji80cgysfsq7m1qifv8z7a2zsh8c8g"; depends=[pracma]; }; bayesAB = derive2 { name="bayesAB"; version="1.1.0"; sha256="0g74n6jvpmb2sbmywcagb10rk8sd3pxzkw9s8s6qpg34q58v01a6"; depends=[ggplot2 Rcpp]; }; bayesCL = derive2 { name="bayesCL"; version="0.0.1"; sha256="1l278lxidn16nma2ny14wjajcqyzbr6j5xl2lj08cic26c7hvjbm"; depends=[]; }; - bayesDP = derive2 { name="bayesDP"; version="1.3.0"; sha256="1g7d64brln5p2gindc18jk4wqmh6phqr4zhs8jhl0yk9g4jhsqzn"; depends=[ggplot2 Rcpp RcppArmadillo survival]; }; + bayesDP = derive2 { name="bayesDP"; version="1.3.1"; sha256="175g75cpynccyzcbzca4h6xa2708985h8dhq34kvkpfhv35pc64d"; depends=[ggplot2 Rcpp RcppArmadillo survival]; }; bayesDccGarch = derive2 { name="bayesDccGarch"; version="2.0"; sha256="1s2b8f43wi9ja966n2p2r4l4s79vk6xb8mqaxsagnw90g969p681"; depends=[coda numDeriv]; }; bayesDem = derive2 { name="bayesDem"; version="2.5-1"; sha256="1cxrqil1p692mbzkcj1fvsx335qyy6c1y43mq48s4shs1hhc69bn"; depends=[bayesLife bayesPop bayesTFR gWidgets gWidgetsRGtk2 RGtk2 wpp2015]; }; bayesGARCH = derive2 { name="bayesGARCH"; version="2.1.3"; sha256="1480mmzfshchfbfh3x420cq5qblfh59jkl21hkq2jvnwppksdn9w"; depends=[coda mvtnorm]; }; @@ -4414,10 +4496,11 @@ in with self; { bayesImageS = derive2 { name="bayesImageS"; version="0.5-1"; sha256="1p4l3i57xm8yrczdiz4nxmd8qv0pv0chlrpvndfn3fnjbcx2cfa2"; depends=[Rcpp RcppArmadillo]; }; bayesLife = derive2 { name="bayesLife"; version="3.2-0"; sha256="1a3x3y77542hgndvymhnyg6dys0s5rimkgprl8psflsgsrxnbmcv"; depends=[bayesTFR car coda hett wpp2017]; }; bayesLopod = derive2 { name="bayesLopod"; version="1.0.1"; sha256="0v9yy75mvr74jc0fz10qj1acwxjy0lbqkdqaj1hn88v294r9dw3q"; depends=[BH inline raster Rcpp RcppEigen rgeos rstan rstantools slam sp StanHeaders]; }; - bayesPop = derive2 { name="bayesPop"; version="6.2-3"; sha256="1znjf8mihip0dl7dyk8h3nbkzihz8lnf7kxvhf1l363v449s0bff"; depends=[abind bayesLife bayesTFR fields googleVis plyr reshape2 rworldmap wpp2012 wpp2017]; }; + bayesPop = derive2 { name="bayesPop"; version="6.2-4"; sha256="1z8s5lbvz642hxl10b4cv361izw82akq40dav3mknqqcgv1vlrk6"; depends=[abind bayesLife bayesTFR fields googleVis plyr reshape2 rworldmap wpp2012 wpp2017]; }; bayesQR = derive2 { name="bayesQR"; version="2.3"; sha256="1c6y7r9h9626ghp68pl5k1g0l95fwd6dp0jfznmhy53qza0ny8z4"; depends=[]; }; bayesSurv = derive2 { name="bayesSurv"; version="3.2"; sha256="1zp302pfi64nnqdiqldvfi1lm0wv2dplz5sfjp0ydl1qc16z0axp"; depends=[coda smoothSurv survival]; }; bayesTFR = derive2 { name="bayesTFR"; version="6.1-2"; sha256="092sl8xk82kybpp0v06j0dxh4zal0d6j2na42ghl2ri36iy6wqvx"; depends=[coda MASS mvtnorm wpp2017]; }; + bayesammi = derive2 { name="bayesammi"; version="0.1.0"; sha256="1vfcmk47x71c5akj3ppxzb74293pikspknkkv08f8p15v0chk7fs"; depends=[dplyr ggplot2 lme4 magrittr MASS mvtnorm rlang rstiefel scales tibble tidyr tmvtnorm]; }; bayesbio = derive2 { name="bayesbio"; version="1.0.0"; sha256="08qa4lzkrcwin7n3kzfqfdlnlqahdmjl1lxpdh29n780cgyjfvs0"; depends=[]; }; bayesboot = derive2 { name="bayesboot"; version="0.2.1"; sha256="0gd3in9z8kx3d29dvyd8blmhlc7wxxl5b2hxnrrq0w13jcnsn57w"; depends=[HDInterval plyr]; }; bayescount = derive2 { name="bayescount"; version="0.9.99-5"; sha256="0c2b54768wn72mk297va3k244256xlsis9cd6zn6q5n1l7ispj6j"; depends=[coda rjags runjags]; }; @@ -4426,12 +4509,13 @@ in with self; { bayesloglin = derive2 { name="bayesloglin"; version="1.0.1"; sha256="0j2ziahf6mwsz2gvb1azvdzlmszlpqgr5zqcqa68pxgq947sa2cs"; depends=[igraph]; }; bayeslongitudinal = derive2 { name="bayeslongitudinal"; version="0.1.0"; sha256="0g45ikpnbry1albb3asrzab5z3sy98yf74c64qn02d65xgafifwg"; depends=[LearnBayes MASS mvtnorm]; }; bayesm = derive2 { name="bayesm"; version="3.1-0.1"; sha256="04b4s8clxrmdyhnhd2arnsdi992422yam3z91w6dzrmngwxq4yaq"; depends=[Rcpp RcppArmadillo]; }; - bayesmeta = derive2 { name="bayesmeta"; version="2.1"; sha256="02aw7fgvdsnqasmvljh1pd5nks1hjys7n3kmlwnkr5a6w476v1q9"; depends=[forestplot metafor]; }; + bayesmeta = derive2 { name="bayesmeta"; version="2.2"; sha256="15pqa1plcnl8pbzs38cw22y3qq1v7f9vla4zy0154crvbrbp8kwf"; depends=[forestplot metafor]; }; bayesmix = derive2 { name="bayesmix"; version="0.7-4"; sha256="1qms1nnk2nq3gqr8zf2b9ri4wv8jrxv5i8s087k1rwdvya3k5r9a"; depends=[coda rjags]; }; - bayesplot = derive2 { name="bayesplot"; version="1.4.0"; sha256="0izp2v734n4pcdlfjrhasl2srlnhccsf93ni6hfhl5l5xyf02043"; depends=[dplyr ggplot2 reshape2 rlang]; }; + bayesplot = derive2 { name="bayesplot"; version="1.5.0"; sha256="1f0kgrgr87fp9576ssrygkp5n4186zq1rw5iwzhqr8s81is352li"; depends=[dplyr ggplot2 ggridges reshape2 rlang]; }; bayespref = derive2 { name="bayespref"; version="1.0"; sha256="0gwlzs7qkgmf90np7xv85d27jjqggyhfj00vpya664a2znyjb3jm"; depends=[coda lattice MASS MCMCpack RColorBrewer]; }; bayess = derive2 { name="bayess"; version="1.4"; sha256="0axipk5hn2hw3g4dfh7y3xa0dxqmi8kqpbr77nl14y7ydpija6xm"; depends=[combinat gplots MASS mnormt]; }; bayou = derive2 { name="bayou"; version="1.1.0"; sha256="1ndd7lygphngvn4a432616f6anmhxbdzmkksrhpl76xvrw5agwkc"; depends=[ape coda denstrip fitdistrplus foreach geiger MASS mnormt phytools Rcpp RcppArmadillo]; }; + baystability = derive2 { name="baystability"; version="0.1.0"; sha256="1zv4bf5a4p21w2qpr6lcsgsxb0xv15v8p33031rsypmnbs9i80dp"; depends=[dplyr ggfortify ggplot2 lme4 magrittr MASS matrixStats reshape2 rlang rstiefel scales tibble tidyr tidyverse]; }; bazar = derive2 { name="bazar"; version="1.0.6"; sha256="12b1x218x1yh9iadv8ciyncr841s0arvj4pbn74bryhcgbvmbwqm"; depends=[kimisc]; }; bbefkr = derive2 { name="bbefkr"; version="4.2"; sha256="1wjx652w3p41sq71a2zdzmb7frjxm6xvcgrc2ark2spwb0lbjjw6"; depends=[]; }; bbemkr = derive2 { name="bbemkr"; version="2.0"; sha256="015c57s8mpimm82nddnh382wlkisxgdmc2hvp7k38pcnqxc5gb5q"; depends=[MASS]; }; @@ -4441,9 +4525,10 @@ in with self; { bc3net = derive2 { name="bc3net"; version="1.0.4"; sha256="15dghd0v1s71h77iw8b49v5h7wcda5mb4540lfyibsdipbashv2h"; depends=[c3net igraph infotheo lattice Matrix]; }; bcROCsurface = derive2 { name="bcROCsurface"; version="1.0-2"; sha256="0v1zjbgpalr5ag97s9rxcd2z0r7qpw8yhc4lw4p4i3xkw2paf5zh"; depends=[boot nnet Rcpp RcppArmadillo rgl]; }; bcRep = derive2 { name="bcRep"; version="1.3.6"; sha256="1fibx11ykkkjv4sgg6zc2a0g270384z2cf68hwghnld0wi002b5z"; depends=[ape doParallel foreach gplots ineq plotrix proxy stringdist vegan]; }; + bcgam = derive2 { name="bcgam"; version="1.0"; sha256="1dg2fcjw8xal77irviiz260qpar2iqkjvi2k4qfm71jyq0ir0axk"; depends=[coda igraph nimble]; }; bclust = derive2 { name="bclust"; version="1.5"; sha256="01kx02azj26b6swly53zhf3sny6c6jglkxnzylsc0pvri89x7yj2"; depends=[]; }; - bcmaps = derive2 { name="bcmaps"; version="0.17.0"; sha256="18rn9zlagp5f0268m8azcbl52jcyx33jjxaqpg05cz853fxib24h"; depends=[httr rappdirs sf]; }; - bcp = derive2 { name="bcp"; version="4.0.0"; sha256="1bkd7812jacyk955l71b2szpc9550p0hpv3x337qgl09zck4vdgm"; depends=[Rcpp RcppArmadillo]; }; + bcmaps = derive2 { name="bcmaps"; version="0.17.1"; sha256="12hca67n7fqplis8g954hj588zl9kj8gmph86mxhcy151qpyh927"; depends=[httr rappdirs sf]; }; + bcp = derive2 { name="bcp"; version="4.0.1"; sha256="1cw7gnkskzwql55bxfrxajsi828zj7rjn7my7dk8lkdqz7n3lsgb"; depends=[Rcpp RcppArmadillo]; }; bcpa = derive2 { name="bcpa"; version="1.1"; sha256="0rwbd39szp0ar9nli2rswhjiwil31zgl7lnwm9phd0qjv8q0ppar"; depends=[plyr Rcpp]; }; bcpmeta = derive2 { name="bcpmeta"; version="1.0"; sha256="02fw1qz9cvr7pvmcng7qg7p04wxxpmvb2s8p78f52w4bf694iqhl"; depends=[mvtnorm]; }; bcrm = derive2 { name="bcrm"; version="0.4.7"; sha256="0s0xmmphrrsqnrsnnsqh9ska6afl4jyk0s0290w6askrlqdzjgil"; depends=[ggplot2 mvtnorm]; }; @@ -4452,7 +4537,7 @@ in with self; { bda = derive2 { name="bda"; version="10.1.9"; sha256="06ycxqjpnsywakjkjxf1czhxsbdzbpwa11m69gad5538z066d24x"; depends=[]; }; bde = derive2 { name="bde"; version="1.0.1"; sha256="1f25gmjfl58x4pns89abfk85yq5aad3bgq9yqpv505g5gxk62d3v"; depends=[ggplot2 shiny]; }; bdlp = derive2 { name="bdlp"; version="0.9-1"; sha256="1ydb5hsaj1bfdz7hcdkc74qlk608kf0xrbpw247klkxrhsh9ba2p"; depends=[DBI GenOrd MASS MultiOrd rgl RSQLite stringdist]; }; - bdots = derive2 { name="bdots"; version="0.1.15"; sha256="1a665f9f18wajf4y6jp17icg9w6wx698xfnlry2sm5pq6nrkmwln"; depends=[doParallel doRNG foreach mvtnorm nlme]; }; + bdots = derive2 { name="bdots"; version="0.1.19"; sha256="1cj6ly62d50z6713119hadl90cxf5x30wpnpx6mssmd49zds6nxb"; depends=[doParallel doRNG foreach Matrix mvtnorm nlme]; }; bdpopt = derive2 { name="bdpopt"; version="1.0-1"; sha256="1z7mdqklw3frsdzyhvx8s8wvblwm28fr1gca2yrivqjng0r47lx4"; depends=[coda rjags]; }; bdpv = derive2 { name="bdpv"; version="1.1"; sha256="0i6wdf27243ch8pn2chqriwxjg3g72wbvzlx52mz4ahw700xjc7n"; depends=[]; }; bdscale = derive2 { name="bdscale"; version="2.0.0"; sha256="1hkkfd69g2bg2y4hicjs6bnw9f0zw74jy0dpadchnzw17lffpms3"; depends=[ggplot2 scales]; }; @@ -4463,15 +4548,17 @@ in with self; { beadarrayFilter = derive2 { name="beadarrayFilter"; version="1.1.0"; sha256="044dq5irc00v2f2gjz0vb69w7q7b84lppc55ganabdv4f0dxdblc"; depends=[beadarray RColorBrewer]; }; beadarrayMSV = derive2 { name="beadarrayMSV"; version="1.1.0"; sha256="0785vmjsli37hjyppk7hlqmn0b683s1apysx9dghbw4h6rgvr8n9"; depends=[Biobase geneplotter limma rggobi]; }; beadplexr = derive2 { name="beadplexr"; version="0.1.0"; sha256="1aw75v4bjxrf22x0bm57qqp6r7cz8zmkd1hmk4amlxypbxd2479f"; depends=[cluster dplyr drc flowCore fpc ggplot2 lazyeval magrittr mclust purrr raster tibble tidyr yaml]; }; + beam = derive2 { name="beam"; version="1.0.1"; sha256="1xp8hqs1asg2a2lqzn88cxj0gs6qfwak54sy3kzc64kjp0r9lbl9"; depends=[fdrtool igraph knitr Matrix]; }; beanplot = derive2 { name="beanplot"; version="1.2"; sha256="0wmkr704fl8kdxkjwmaxw2a2h5dwzfgsgpncnk2p2wd4768jknj9"; depends=[]; }; beanz = derive2 { name="beanz"; version="2.1"; sha256="0lnjaka2cmkgc7id8njclmmkjb22v6gz9bkncq5n6zidawrczqp0"; depends=[BH loo Rcpp RcppEigen rstan StanHeaders survival]; }; - beast = derive2 { name="beast"; version="1.0"; sha256="1j4afp8cm6psxqidanvcfqrz6zy1klkzjkm7ia5w5qlvgll2micz"; depends=[RColorBrewer]; }; + beast = derive2 { name="beast"; version="1.1"; sha256="0ikbnzdzp2lv1nh5mxxanra81v4dl6svg3ywqcqd6wgzri70a4ry"; depends=[RColorBrewer]; }; bedr = derive2 { name="bedr"; version="1.0.4"; sha256="052sn90gjr34hjgyndzvcl66pv22q0kjqbx95y1pdydiwhwmhpa3"; depends=[data_table R_utils testthat VennDiagram yaml]; }; beepr = derive2 { name="beepr"; version="1.2"; sha256="0w4szy3rgj1bdcanxbcb9agyw38jqp0hc7qsn7j9700vh20zqbln"; depends=[audio stringr]; }; beeswarm = derive2 { name="beeswarm"; version="0.2.3"; sha256="0hy89bwv7jixlg91li1fywa77916am2whqp1m1fx1khd45g44581"; depends=[]; }; beginr = derive2 { name="beginr"; version="0.1.0"; sha256="0zi2c6agkxx6aq7ih2c1z4r93fsjmqp2iymxllld0d7jcpp5qbv6"; depends=[cranlogs jsonlite]; }; + behavr = derive2 { name="behavr"; version="0.3.1"; sha256="18rpln7db8cnaj6f47vjgh7q2xbcjmd0vhfbmvm82fr7qhdnnyc0"; depends=[data_table]; }; belex = derive2 { name="belex"; version="0.1.0"; sha256="1563yngc1lvncmx3h6kgsj1r6k3hvxidh6h9rb7apxs2rq5k32ms"; depends=[XML]; }; - belg = derive2 { name="belg"; version="0.1.1"; sha256="0bbp413q6y24g05xsk49lpz7b2i6n9fb791h05ml39x8r9lapif6"; depends=[Rcpp RcppArmadillo]; }; + belg = derive2 { name="belg"; version="0.2.1"; sha256="0yl4d2zq01r0wcxdjz3v0zmhdj1g7nbw1kn56883vsv5izdliksv"; depends=[Rcpp RcppArmadillo]; }; benchden = derive2 { name="benchden"; version="1.0.5"; sha256="1cwcgcm660k8rc8cpd9sfpzz66r55b4f4hcjc0hznpml35015zla"; depends=[]; }; benchmark = derive2 { name="benchmark"; version="0.3-6"; sha256="05rgrjhbvkdv06nzbh0v57b06vdikrqc1d29wirzficxxbjk1hih"; depends=[ggplot2 plyr proto psychotools relations reshape scales]; }; benchmarkme = derive2 { name="benchmarkme"; version="0.6.0"; sha256="0w98q4b814bz3q0vqdfnwqrgfrky3ggsyyzmdiz17kv6xk17qds8"; depends=[benchmarkmeData doParallel foreach httr Matrix]; }; @@ -4479,9 +4566,9 @@ in with self; { benchr = derive2 { name="benchr"; version="0.2.0"; sha256="042ijh6726s116z7w2cky5l105p3dj7xsfmlwkigsbrmya8x5d37"; depends=[Rcpp RcppProgress]; }; benford_analysis = derive2 { name="benford.analysis"; version="0.1.4.1"; sha256="0acbjjavbvsaigy78b5k9qhj8011751116lqln8j0v8w1k3vqwqm"; depends=[data_table]; }; bentcableAR = derive2 { name="bentcableAR"; version="0.3.0"; sha256="1gjrlv94av9955jqhicaiqm36rrgmy0avxn9y7wbp2s1sbg7fyg7"; depends=[]; }; - benthos = derive2 { name="benthos"; version="1.3-4"; sha256="015p9wxykr2g29r95wdslw1d2klc9ps4wznjrv1rxm5mazdbb2wv"; depends=[dplyr lazyeval readr]; }; + benthos = derive2 { name="benthos"; version="1.3-5"; sha256="1mzhqqy4dblwv70v1ky5gzrr3jyky9k4wibbp589jjjrga2vhq2a"; depends=[dplyr lazyeval readr]; }; ber = derive2 { name="ber"; version="4.0"; sha256="0gl7rms92qpa5ksn8h3ppykmxk5lzbcs13kf2sjiy0r2535n8ydi"; depends=[MASS]; }; - berryFunctions = derive2 { name="berryFunctions"; version="1.16.3"; sha256="0bwqp999niakmihhj4wp9q63bg4mr4gsygxzss0dl276q7ma8x5i"; depends=[abind]; }; + berryFunctions = derive2 { name="berryFunctions"; version="1.17.0"; sha256="13wslhr3xm9davx3s69as41r53m3x0gm3mrnwrbsqcbmf9n0zbv3"; depends=[abind]; }; bestNormalize = derive2 { name="bestNormalize"; version="1.0.1"; sha256="0mlvaa35nsp19154g894xvfd6wg99lwxnfissf8yykwfl7fb265x"; depends=[LambertW nortest]; }; bestglm = derive2 { name="bestglm"; version="0.36"; sha256="1das1qnczgw46hrjplfhw00wqjd8gxqsdr9s4zmc3k8qlzhb3ych"; depends=[glmnet grpreg lattice leaps]; }; betacal = derive2 { name="betacal"; version="0.1.0"; sha256="19wgpgf9yhckl9qx9v24f4yh055wfalphcxwm7lg68px6ap2pxl9"; depends=[]; }; @@ -4504,17 +4591,18 @@ in with self; { bgmm = derive2 { name="bgmm"; version="1.8.3"; sha256="09hsqjjyzlpl0fqb7832j5ydrr0yc42zb1c9q1y5hbrms7yp00p8"; depends=[car combinat lattice mvtnorm]; }; bgsmtr = derive2 { name="bgsmtr"; version="0.1"; sha256="09h118msqf9yl2z7d6dsvgn4vrvy43ynznajj58k7gkxdlm1nimg"; depends=[coda EDISON Matrix mnormt mvtnorm sparseMVN statmod]; }; bhm = derive2 { name="bhm"; version="1.13"; sha256="1iq1hjc7xn2kmmxgzv6mzcvvf48kqp5b8lavmzrqykak3v4z02nz"; depends=[coda survival]; }; + bhrcr = derive2 { name="bhrcr"; version="1.0.0"; sha256="0rqn9wkd25d7l295n55idsf1zch1niz5f05qnsbd1gqrq7nw42xn"; depends=[AER Cairo MASS MCMCpack msm mvtnorm survival]; }; biasbetareg = derive2 { name="biasbetareg"; version="1.0"; sha256="1562zdin0y5mrp36ih11ir3h9cv49cx1l98chxd89fkj8x3c1fbg"; depends=[betareg]; }; - bibliometrix = derive2 { name="bibliometrix"; version="1.9"; sha256="1yzdbh5h3fvc6agr551g9n10mlr72cbsrw9mpigfhxb953wvda54"; depends=[factoextra FactoMineR ggplot2 igraph Matrix RColorBrewer RISmed rscopus SnowballC stringdist stringr]; }; + bibliometrix = derive2 { name="bibliometrix"; version="1.9.2"; sha256="0xv371k1n00awk3w7cjbiyf3wxkk5vch3hf7lp2yz3fsdy2jh91s"; depends=[factoextra FactoMineR ggplot2 ggrepel igraph Matrix RColorBrewer RISmed rscopus SnowballC stringdist stringr]; }; bibliospec = derive2 { name="bibliospec"; version="0.0.4"; sha256="0abrbaw2knnlh8g5r4c2i6cc7a6ilfxry8zhscrx0x58irmp790b"; depends=[DBI RSQLite]; }; bibtex = derive2 { name="bibtex"; version="0.4.2"; sha256="0wl3925ryd54g1nv3ncwllc493d39dpgy5md61940h69c0van1hz"; depends=[stringr]; }; biclique = derive2 { name="biclique"; version="1.0.1"; sha256="0wxvqjxc11ccvfnlnnb6gv6r74a48pg3yabsjynrg1m2kbynnqjf"; depends=[]; }; biclust = derive2 { name="biclust"; version="1.2.0"; sha256="03vkj7zp3dl4zbv2gzv9pahcd1018lbv4ixghvv1g0fsbndrybdg"; depends=[colorspace flexclust lattice MASS]; }; - bifactorial = derive2 { name="bifactorial"; version="1.4.7"; sha256="187zlsqph7m63wf6wajvs6a4a08aax9hiqssgvma6cpkpisfiz4k"; depends=[lattice multcomp mvtnorm Rcpp]; }; bife = derive2 { name="bife"; version="0.5"; sha256="0lzij8sazfdr687bi5lfp5ndvwlx18vyzr3svc0zv9mnv8s8vfvd"; depends=[Formula Rcpp RcppArmadillo]; }; bigFastlm = derive2 { name="bigFastlm"; version="0.0.2"; sha256="012vxy5mpknc3998h382qdzgrxnyfpyddy003zjp3v42clim5y64"; depends=[BH bigmemory Rcpp RcppEigen]; }; bigGP = derive2 { name="bigGP"; version="0.1-6"; sha256="0fwm06rzx1qbh16ii93x26i4v4yb50jk67k3qmzyr3gr4z9b9xhg"; depends=[Rmpi]; }; - bigKRLS = derive2 { name="bigKRLS"; version="2.0.4"; sha256="027p1v89fpi2rgxca035nyzk51dxv0x04sy3mqb5z38rvj8r08k9"; depends=[BH bigalgebra biganalytics bigmemory ggplot2 Rcpp RcppArmadillo shiny]; }; + bigIntegerAlgos = derive2 { name="bigIntegerAlgos"; version="0.1.0"; sha256="1ik5daj2yc2shjkqypl4y6d53nmz170jvx0bdxn3hpm3g5crg1wd"; depends=[gmp]; }; + bigKRLS = derive2 { name="bigKRLS"; version="3.0.0"; sha256="043lm32cams2hc0fg1mvq08r4ippy4s5z62n1616vndfmqsn41v8"; depends=[BH bigalgebra biganalytics bigmemory ggplot2 Rcpp RcppArmadillo shiny]; }; bigQueryR = derive2 { name="bigQueryR"; version="0.3.2"; sha256="0l61yvvjlv1zgb1vyf1q3sj4dff1vi6lkf61hc9kqs5cvhqbf87y"; depends=[assertthat googleAuthR googleCloudStorageR httr jsonlite]; }; bigRR = derive2 { name="bigRR"; version="1.3-10"; sha256="08m77r9br6wb9i21smaj4pwwpq3nxdirs542gnkrpakl7bvyp6s3"; depends=[DatABEL hglm]; }; bigReg = derive2 { name="bigReg"; version="0.1.2"; sha256="1hmvh5j40zpzz6c88hmikphps8rb741yvkg60dxmkfl8gxqsrp3w"; depends=[MASS Rcpp RcppArmadillo uuid]; }; @@ -4522,8 +4610,9 @@ in with self; { biganalytics = derive2 { name="biganalytics"; version="1.1.14"; sha256="1hsqdg5hkhs6z9pwvn055q02hzpksjwrf33q5zdnkm387g188ca6"; depends=[BH biglm bigmemory foreach Rcpp]; }; biglars = derive2 { name="biglars"; version="1.0.2"; sha256="17zs25dvlja9ynx2fm5f4nmgkx4mnyqs5iscwsyahr6qigx1rz9x"; depends=[ff]; }; biglasso = derive2 { name="biglasso"; version="1.3-6"; sha256="044l2l34l4pl7ijwgq569cn8x5clj795qpfwb1b9qfwvggvgzgni"; depends=[BH bigmemory Matrix ncvreg Rcpp RcppArmadillo]; }; - bigleaf = derive2 { name="bigleaf"; version="0.3.0"; sha256="1y1z9hi23w0n374jvndr0prry7msp6lfzkwzdr7ivpi89af0h027"; depends=[robustbase]; }; + bigleaf = derive2 { name="bigleaf"; version="0.5.2"; sha256="13x79i15jvv1bx4xnl9jakjmbxviac0gnrprax61c5afkaqxfxh4"; depends=[robustbase]; }; biglm = derive2 { name="biglm"; version="0.9-1"; sha256="1z7h4by457z93k5i6qf5rq7xmd1y2kcd1rq4pv465cd32d4mb2g1"; depends=[DBI]; }; + bigmatch = derive2 { name="bigmatch"; version="0.1.0"; sha256="15qrm3kdp9wglmpsy58z117nj85j8zc6cmf5w1kydamk2c8x49c9"; depends=[liqueueR mvnfast plyr rcbalance]; }; bigmemory = derive2 { name="bigmemory"; version="4.5.33"; sha256="0ycl9dzm3drpyas625h34rir5bnbjlncxlvawfsfmqwcbmwdjdvj"; depends=[BH bigmemory_sri Rcpp]; }; bigmemory_sri = derive2 { name="bigmemory.sri"; version="0.1.3"; sha256="0mg14ilwdkd64q2ri9jdwnk7mp55dqim7xfifrs65sdsv1934h2m"; depends=[]; }; bigml = derive2 { name="bigml"; version="0.1.2"; sha256="0vl5krjbgckknxwl26b2hn63jhb80zbn7abpckhxzxfxzncpnfz9"; depends=[plyr RCurl RJSONIO]; }; @@ -4541,14 +4630,14 @@ in with self; { billboarder = derive2 { name="billboarder"; version="0.2.1"; sha256="0xmkj6l3cpyyq23hp6jhfqllpg7gkksajnq25wyccqmypxjik8jv"; depends=[ggplot2 htmlwidgets jsonlite magrittr scales]; }; bimetallic = derive2 { name="bimetallic"; version="1.0"; sha256="181qi4dr0zc7x6wziq7jdc1his20jmprfpq3hrfm56fr5n1sj8wl"; depends=[]; }; bimixt = derive2 { name="bimixt"; version="1.0"; sha256="0nhszpzjqy8z3vngl5jdzqxzshnn92wgi0ci5n3n5kzi24xkfrzc"; depends=[pROC]; }; - binGroup = derive2 { name="binGroup"; version="1.1-0"; sha256="1sf7prg2x1ryynf1kz7jr50svmga7kjgd5pi9qm3g2hyimz8mvs4"; depends=[]; }; + binGroup = derive2 { name="binGroup"; version="2.1-1"; sha256="1rwmsrm4ghpvb1vldph2frwglfvajwyj7bzi1f6mhnm9mrg80blj"; depends=[partitions]; }; binMto = derive2 { name="binMto"; version="0.0-6"; sha256="1h9s42wk848x15f4glhsh2iikpra64miwlia6xz5dqlzbs4vw86k"; depends=[mvtnorm]; }; binaryGP = derive2 { name="binaryGP"; version="0.2"; sha256="0i4xi0gxk0lamjdygyx0azdp3kfqmva1g20nl3p65w4yx77m88d6"; depends=[GPfit lhs logitnorm nloptr Rcpp RcppArmadillo]; }; binaryLogic = derive2 { name="binaryLogic"; version="0.3.9"; sha256="19ig9qgjjnivfihjy41pc13qlrb95679mmk4zks5lbbri8qi4qxj"; depends=[]; }; binda = derive2 { name="binda"; version="1.0.3"; sha256="15rhxnlif7agblzd09gyllkqkf5d8cc75b4vmp7grx8a6y7w47g0"; depends=[entropy]; }; bindata = derive2 { name="bindata"; version="0.9-19"; sha256="15ya21fz1kvq4qsppkn9ypiqvaq8q4vszdcgcymampa7zc07z2ld"; depends=[e1071 mvtnorm]; }; - bindr = derive2 { name="bindr"; version="0.1"; sha256="0d95ifm0x4mrfzi20xf39f5pzd7rfzqsld0vjqf6xzga5rhnd8fc"; depends=[]; }; - bindrcpp = derive2 { name="bindrcpp"; version="0.2"; sha256="0l1l22zl87wiyl79m3gj2vlxmkhxvrkl4alhyy08h55q7hqs3vyh"; depends=[bindr plogr Rcpp]; }; + bindr = derive2 { name="bindr"; version="0.1.1"; sha256="1l05fpk2yql3jka321c0bdgx6mqq9pvfrg2844lbjfpbgjkmqy3w"; depends=[]; }; + bindrcpp = derive2 { name="bindrcpp"; version="0.2.2"; sha256="0rz4ibjdjsxl99ff3ha79z7cnjmilx4rx58fk9kk7ld9xc4hf4s8"; depends=[bindr plogr Rcpp]; }; binequality = derive2 { name="binequality"; version="1.0.3"; sha256="0hhcmw1mq785zylcxghfnazi3xvnl7sqpqll8fqdk064a4drqkw1"; depends=[gamlss gamlss_cens gamlss_dist ineq survival]; }; binford = derive2 { name="binford"; version="0.1.0"; sha256="04mpdvynlm4gddybys04k0446gc9hyq0vaxr6a525p76ls5aw4b1"; depends=[]; }; bingat = derive2 { name="bingat"; version="1.3"; sha256="1y68rgafipfad78yrzcygdszgy1d5q739kap06pzr78bn3i8hiwa"; depends=[doParallel foreach gplots matrixStats network vegan]; }; @@ -4566,14 +4655,14 @@ in with self; { binsmooth = derive2 { name="binsmooth"; version="0.1.0"; sha256="1zlw4zmkckg7rwf4hx8wyr2yl644xkdkazayysy99saysr9pk2c9"; depends=[ineq pracma triangle]; }; binst = derive2 { name="binst"; version="0.2.1"; sha256="09kzk7n1j9nzgyijwirzk33z6p6hc67zkd05hv1i9qfijy31gci4"; depends=[rpart]; }; bio_infer = derive2 { name="bio.infer"; version="1.3-3"; sha256="14pdv6yk0sk6v8g9p6bazbp7mr3wmxgfi6p6dj9n77lhqlvjcgm9"; depends=[]; }; - bio3d = derive2 { name="bio3d"; version="2.3-3"; sha256="0cw6nhkj5mxh89lfrnhrmv0rwxkmh05g6nd6rvd7ahcaxd3mid7l"; depends=[Rcpp]; }; - bioOED = derive2 { name="bioOED"; version="0.1.1"; sha256="18b66s5dn8a67iwb0g1bmbi856ip81yfa57m40kf7phsga52ncg1"; depends=[bioinactivation corrplot dplyr FME ggplot2 MEIGOR]; }; + bio3d = derive2 { name="bio3d"; version="2.3-4"; sha256="1zmswa9xs81lbrlkkgi8dvv9xpf0ynqjqwy1k36szvfb8ar9mczr"; depends=[Rcpp]; }; + bioOED = derive2 { name="bioOED"; version="0.1.4"; sha256="1rjcqrni5xag97pxfsf40isr2c8pkqsvihf86phak8ngwl7qdgmc"; depends=[bioinactivation corrplot dplyr FME ggplot2 MEIGOR]; }; bioPN = derive2 { name="bioPN"; version="1.2.0"; sha256="0mvqgsfc7d4h6npgg728chyp5jcsf49xhnq8cgjxfzmdayr1fwr8"; depends=[]; }; biofiles = derive2 { name="biofiles"; version="1.0.0"; sha256="1bglgl2jcp6jy3f7xwndil56i98xx4kn518s3fqdixw7n5ibmqd2"; depends=[assertthat BiocGenerics Biostrings foreach GenomeInfoDb GenomicRanges IRanges iterators Rcpp RCurl reutils S4Vectors XVector]; }; biogas = derive2 { name="biogas"; version="1.10.0"; sha256="1il4r71h2a0xqpjs7q97ypdd12jmdnh0kqcs6j5gpjxdsmgnhlsy"; depends=[]; }; biogeo = derive2 { name="biogeo"; version="1.0"; sha256="14sqgg8b06gp5dajxvyj9s3ndsk7jpkfr0mkyl2l61kgp6qx53rh"; depends=[maptools raster sp stringr vegan]; }; biogram = derive2 { name="biogram"; version="1.4"; sha256="1kkim6dxmvvpby2ir280adl14jmrz7nsib3m8g2ki81d539km6il"; depends=[bit combinat entropy partitions slam]; }; - bioimagetools = derive2 { name="bioimagetools"; version="1.1.0"; sha256="0ws99rx7bhqi448qqy08jsl3c4vbq96gigqb85yv1mzrc82sg62p"; depends=[EBImage httr tiff]; }; + bioimagetools = derive2 { name="bioimagetools"; version="1.1.3"; sha256="1xl5q45s4amvinfzysf5za0myq1f76xvqhyza0b191bky5vk8qq1"; depends=[EBImage httr tiff]; }; bioinactivation = derive2 { name="bioinactivation"; version="1.2.1"; sha256="1dxpa549y6dqzmi8nk57x0blqmcz51v9hj0sy3g9laj9aj0rmyzz"; depends=[deSolve dplyr FME ggplot2 lazyeval MASS rlang]; }; biolink = derive2 { name="biolink"; version="0.1.3"; sha256="0cy9s9wg5rgwczqjfw6xp9ragqcj9gzp7icpm0nqwrdghsj7azjv"; depends=[DBI glue memoise rentrez RMySQL xml2]; }; biomartr = derive2 { name="biomartr"; version="0.7.0"; sha256="1gjl4xh9ryxsf3lhn4fqa3zw10yc0mwrfgkrbq117njsw988kms7"; depends=[biomaRt Biostrings curl data_table downloader dplyr httr jsonlite purrr RCurl readr stringr tibble XML]; }; @@ -4581,7 +4670,7 @@ in with self; { bionetdata = derive2 { name="bionetdata"; version="1.0.1"; sha256="1l362zxgcvxln47b1vc46ad6ww8ibwhqr2myxnz1dnk2a8nj7r2q"; depends=[]; }; bioplots = derive2 { name="bioplots"; version="0.0.1"; sha256="184wp1jvgf7a80srrfq72a4r1la2psr8b16kxs00v2gcbgjyvr10"; depends=[ggplot2 gplots RColorBrewer reshape2]; }; bios2mds = derive2 { name="bios2mds"; version="1.2.2"; sha256="1avzkbk91b7ifjba5zby5r2yw5mibf2wv05a4nj27gwxfwrr21cd"; depends=[amap cluster e1071 rgl scales]; }; - bioset = derive2 { name="bioset"; version="0.2.0"; sha256="1cv4sgmbvxghwa22qwvgp5zgbfcyhljsh6c6k7gakxsv0wz1xq46"; depends=[dplyr magrittr rlang tibble tidyr]; }; + bioset = derive2 { name="bioset"; version="0.2.2"; sha256="1l2iss3rbzc69360r9i9j7nf0nn4fkj3j7bgc1hdabr32i19jkhh"; depends=[dplyr magrittr rlang tibble tidyr]; }; biosignalEMG = derive2 { name="biosignalEMG"; version="2.1.0"; sha256="0bbkrfqkmks4z8c7rh0k43lvm71vn3fzrw3kpj012ym77whwkvay"; depends=[signal]; }; biospear = derive2 { name="biospear"; version="1.0.1"; sha256="03wsyzlxmqff6xvr10jy49p229xr6jjvr8kk93wm7wil7q6b7z42"; depends=[cobs corpcor devtools glmnet grplasso MASS Matrix mboost pkgconfig plsRcox pROC PRROC RCurl survAUC survival]; }; biotic = derive2 { name="biotic"; version="0.1.2"; sha256="1p18jkdd263dgk90626n9awkj6m4zn1n7897596fzrzrahksa978"; depends=[]; }; @@ -4592,6 +4681,7 @@ in with self; { birdring = derive2 { name="birdring"; version="1.3"; sha256="1vlivapmgq3kz2zz795c7hcfpibnqcfnxp7m42di37yngqc90q87"; depends=[geosphere ks lazyData raster rgdal rgeos rworldmap rworldxtra sp]; }; birk = derive2 { name="birk"; version="2.1.2"; sha256="07ck59m5mw897a60vmdn1b3qrmqj20qpfsn3093haqbpn8z13dmn"; depends=[]; }; birtr = derive2 { name="birtr"; version="1.0.0"; sha256="0bcxvj30wzwclw1lcyhvwj3k7awd39lrvzia1nrg53hw90bfs811"; depends=[]; }; + bisect = derive2 { name="bisect"; version="0.9.0"; sha256="1dr95gnc9rb3i8603wspf0hznmvk5akk46nyf1bhv88mjz2i5q77"; depends=[]; }; bisectr = derive2 { name="bisectr"; version="0.1.0"; sha256="1vjsjshvzj66qqzg32rviklqswrb00jyq6vwrywg1hpqhf4kisv7"; depends=[devtools]; }; bisoreg = derive2 { name="bisoreg"; version="1.4"; sha256="1ianhk5vrzhwb9ymzvlx9701p5c4iasxyq7nhrvm815dm15rf2wf"; depends=[bootstrap coda monreg R2WinBUGS]; }; bit = derive2 { name="bit"; version="1.1-12"; sha256="0a6ig6nnjzq80r2ll4hc74za3xwzbzig6wlyb4dby0knzf3iqa6f"; depends=[]; }; @@ -4601,11 +4691,11 @@ in with self; { bivarRIpower = derive2 { name="bivarRIpower"; version="1.2"; sha256="0vgi0476rwali6k8bkp317jawzq5pf04v75xmycpmadb7drnpzy0"; depends=[]; }; bivrp = derive2 { name="bivrp"; version="1.0"; sha256="0q00k24fssvjkgpndg84vdm7w9hswq593k6yjha4pl0a8bmnv6f8"; depends=[MASS]; }; biwt = derive2 { name="biwt"; version="1.0"; sha256="1mb3x8ky3x8j4n8d859i7byyjyfzq035i674b2dmdca6mn7paa14"; depends=[MASS rrcov]; }; - bizdays = derive2 { name="bizdays"; version="1.0.4"; sha256="0vl9anlwvnnaiz67h256r386gy57fbbygjahsjaiaw8zrp84fj3p"; depends=[]; }; + bizdays = derive2 { name="bizdays"; version="1.0.5"; sha256="0yw53qzi2wbc33q5snmf7xsisfnknvf6pqr20npkwbh3999i1gk0"; depends=[]; }; bkmr = derive2 { name="bkmr"; version="0.2.0"; sha256="0dk6dn73bqlvwinn3aginls4533931xcr3h59k0w60yxs3v8yakv"; depends=[dplyr fields magrittr MASS nlme tidyr tmvtnorm truncnorm]; }; blackbox = derive2 { name="blackbox"; version="1.1.7"; sha256="1qdj6wsgr623wnhc573krnhjx65d4k9y8i3n2l2lj1qpqd538ygw"; depends=[geometry lattice MASS nloptr numDeriv proxy rcdd Rcpp RcppEigen spaMM]; }; blandr = derive2 { name="blandr"; version="0.4.3"; sha256="03w1k646izbrygcsynrzrph7crpqdqn58544mmm9zxfvkmsilpmi"; depends=[ggplot2 knitr]; }; - blastula = derive2 { name="blastula"; version="0.1"; sha256="0i306x0xm34r9fz7iq8frjbcvfbgg64fm5nn7mbk29a58kn91axp"; depends=[commonmark ggplot2 glue htmltools httr knitr magrittr mailR rJava stringr]; }; + blastula = derive2 { name="blastula"; version="0.2.0"; sha256="11vaqsfm0kszx3iq38c8vbqnwkfk77lv5021l2zq9iaxz9d83s7k"; depends=[commonmark downloader dplyr ggplot2 glue htmltools httr knitr magrittr purrr rlang stringr tibble tidyr]; }; blavaan = derive2 { name="blavaan"; version="0.3-1"; sha256="1r5kararl5d8fk6zlawhyjpi1sc3xp1pd2cf83qmh9wbvdsfphwg"; depends=[coda lavaan loo MASS MCMCpack mnormt nonnest2 runjags]; }; blendedLink = derive2 { name="blendedLink"; version="1.0"; sha256="19d1pnjag89jjvkl5a6wx531qjqp4cv5jk95md6jby27yr52r8vp"; depends=[]; }; blender = derive2 { name="blender"; version="0.1.2"; sha256="1qqkfgf7fzwcz88a43cqr8bw86qda33f18dg3rv1k77gpjqr999c"; depends=[vegan]; }; @@ -4616,22 +4706,22 @@ in with self; { blm = derive2 { name="blm"; version="2013.2.4.4"; sha256="1w6c30cq38j4i1q4hjg12l70mhy5viw886l1lsnxyvniy113in4i"; depends=[]; }; blme = derive2 { name="blme"; version="1.0-4"; sha256="1ca2b0248k0fj3lczn9shfjplz1sl4ay4v6djldizp2ch2vwdgy2"; depends=[lme4]; }; blmeco = derive2 { name="blmeco"; version="1.1"; sha256="1hzg5dimzj1khygm9dv0y30mx1nf9vdhgicqdg1rvj7nf426h2ki"; depends=[arm lme4 MASS MuMIn]; }; - blob = derive2 { name="blob"; version="1.1.0"; sha256="05pazzcyz3c3vd2l70zq9cf172cgjff4dnf419zigfnxycyn1mhn"; depends=[tibble]; }; + blob = derive2 { name="blob"; version="1.1.1"; sha256="0lsg91hk508dd95ivig2lwg62qafwnarjw68110kx63cfk4zkjxc"; depends=[prettyunits]; }; blockTools = derive2 { name="blockTools"; version="0.6-3"; sha256="0023p0msfmp8swq4f5aff40m976np7y051x8hjizzw91hrfa4w2n"; depends=[MASS tibble]; }; blockcluster = derive2 { name="blockcluster"; version="4.2.6"; sha256="0dskcwdh89a24j1lr829p9rrs88l13738b1gvsmsqrcrg9z955xc"; depends=[Rcpp rtkore]; }; blockmatrix = derive2 { name="blockmatrix"; version="1.0"; sha256="14k69ly4i8pb8z59005kaf5rpv611kk1mk96q6piyn1gz1s6sk6r"; depends=[]; }; - blockmodeling = derive2 { name="blockmodeling"; version="0.1.9"; sha256="1rd8ifwv5q9yl0ayzkgi0h4k79w3r46dr164l73iz1ny77a78fn9"; depends=[]; }; + blockmodeling = derive2 { name="blockmodeling"; version="0.3.0"; sha256="188m35gpf1lbs3yhqrdiz9zfmf3p4v6v0grzmax3d9w9n5g7rx2y"; depends=[doParallel doRNG foreach Matrix]; }; blockmodels = derive2 { name="blockmodels"; version="1.1.1"; sha256="088629i4g63m8rnqmrv50dgpqbnxd1a4zl5wr3ga0pdpqhmd53wp"; depends=[digest Rcpp RcppArmadillo]; }; blockrand = derive2 { name="blockrand"; version="1.3"; sha256="1090vb26w6s7iqjcal0xbb3qb6p6j46a5w25f1wjdppd1spvh7f9"; depends=[]; }; - blocksdesign = derive2 { name="blocksdesign"; version="2.7"; sha256="0pkkp1i6dsj4q4p6529qkbyy8mqmw9zhs1ww1y55yn1adkkwfd4z"; depends=[crossdes]; }; + blocksdesign = derive2 { name="blocksdesign"; version="2.8"; sha256="0wgdgy705wpq0lh3k46ba7y8dzajgyfzcr87yvvzh610wr8vnsam"; depends=[crossdes]; }; blockseg = derive2 { name="blockseg"; version="0.2"; sha256="183hjb66589qqjwf14rzdmy770biad73r0l5pkh6f4xk9xac1r62"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2]; }; - blogdown = derive2 { name="blogdown"; version="0.5"; sha256="1i34vynvb496w638g0mip30vrxcx60nbr48g1nfkmgiw1nrvr8c5"; depends=[bookdown htmltools httpuv knitr rmarkdown servr xfun yaml]; }; + blogdown = derive2 { name="blogdown"; version="0.6"; sha256="02ahyzcapsjaanjiz1j9jx2wh8w2fa7dwbraj5w7bl7bln87cs16"; depends=[bookdown htmltools httpuv knitr rmarkdown servr xfun yaml]; }; blsAPI = derive2 { name="blsAPI"; version="0.1.9"; sha256="1p7s799kix396fbx8ap9vy9akwpaps37awr18qbj53n9qcm74wkp"; depends=[RCurl rjson]; }; - blscrapeR = derive2 { name="blscrapeR"; version="3.1.1"; sha256="1s76d6511ifhh17dnwhrd8hzmfnb26qal68pn4v4smz35srgfa9j"; depends=[dplyr ggplot2 httr jsonlite magrittr purrr stringr tibble]; }; + blscrapeR = derive2 { name="blscrapeR"; version="3.1.2"; sha256="1k5g1j4n071pmh2z5lpgkll2i1abpq1h9qialdszak794x8km605"; depends=[dplyr ggplot2 httr jsonlite magrittr purrr stringr tibble]; }; bmd = derive2 { name="bmd"; version="0.5"; sha256="0d4wxyymycb416sdn272292l70s1h2m5kv568vakx3rbvb8y6agy"; depends=[drc]; }; bmem = derive2 { name="bmem"; version="1.5"; sha256="1miiki743rraralk9dp12dsjjajj3iizcrfwmplf6xas6pl8sfk6"; depends=[Amelia lavaan MASS sem snowfall]; }; bmeta = derive2 { name="bmeta"; version="0.1.2"; sha256="19pm60xpmlanngq4nbibp0n5m98xw24b2xghz92ly31i3mkg2n68"; depends=[forestplot R2jags]; }; - bmixture = derive2 { name="bmixture"; version="0.5"; sha256="144nd1s18nyii135jfr2f65szyzw8hi4zg57z85dnmr2xwas22qb"; depends=[BDgraph]; }; + bmixture = derive2 { name="bmixture"; version="0.7"; sha256="0x876wsahm0k3v900rkvvl2sma3awkhbrsfygikk1wskh3snqbsj"; depends=[BDgraph]; }; bmk = derive2 { name="bmk"; version="1.0"; sha256="1wxkrlrhmsxsiraj8nyiax9bqs834ln2swykmpf40wxspkykgfdq"; depends=[coda functional plyr]; }; bmlm = derive2 { name="bmlm"; version="1.3.5"; sha256="091yjllx4kfngaam1ac8rxcx547k7s7qa75pb5350qkr096pvsvs"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; }; bmmix = derive2 { name="bmmix"; version="0.1-2"; sha256="00php2pgpnm9n0mnamchi6a3dgaa97kdz2ynivrf38s0vca7fqx8"; depends=[ggplot2 reshape2]; }; @@ -4642,7 +4732,7 @@ in with self; { bnlearn = derive2 { name="bnlearn"; version="4.3"; sha256="11zp8vf79h5a6dyijazld199pzp1lsgk3x049ykgy0bqjx2ivfvq"; depends=[]; }; bnnSurvival = derive2 { name="bnnSurvival"; version="0.1.5"; sha256="1d9jmfx0id4lmw122zga7hb52vlfdfqn4amhzpsmhyck99rv92j4"; depends=[pec prodlim Rcpp]; }; bnormnlr = derive2 { name="bnormnlr"; version="1.0"; sha256="0l2r7vqikak47nr6spdzgjzhvmkr9dc61lfnxybmajvcyy6ymqs9"; depends=[mvtnorm numDeriv]; }; - bnpmr = derive2 { name="bnpmr"; version="1.1"; sha256="0hvwkdbs2p2l0iw0425nca614qy3gsqfq4mifipy98yxxvgh8qgc"; depends=[]; }; + bnpmr = derive2 { name="bnpmr"; version="1.2"; sha256="0vpqhs1h2mphn9w5yngb7lxvmzrhn7mkj7ca6hykhhg48s2ra98g"; depends=[]; }; bnpsd = derive2 { name="bnpsd"; version="1.0.1"; sha256="0f9w3qcdmf6qx5k01vddmxj1vadx6d9zcgw6prpbmcf3cdy3fwg0"; depends=[]; }; bnspatial = derive2 { name="bnspatial"; version="1.0.3"; sha256="018rb5wacjk8igyc0qbp9rk3vjz3lffx81awlba8d2npiaxq6jbv"; depends=[doParallel foreach gRain gRbase raster]; }; bnstruct = derive2 { name="bnstruct"; version="1.0.2"; sha256="0n4gn1vhka694wdzignawyaca0rx2l0wjgw09fw42bkrswfjvxy1"; depends=[bitops igraph Matrix]; }; @@ -4651,7 +4741,7 @@ in with self; { bodenmiller = derive2 { name="bodenmiller"; version="0.1"; sha256="0gqrjscgq4qgk7yl32w0965yscc1py9klr49s8q8hkzyihlwzim2"; depends=[]; }; boilerpipeR = derive2 { name="boilerpipeR"; version="1.3"; sha256="0467bjqhdmi3p02fp0r7rgm00x9ry464f2hniav990qzsw8i16q6"; depends=[rJava]; }; bold = derive2 { name="bold"; version="0.5.0"; sha256="0gdmb3zsspcp594d32yzqhdpw4dwg7a3pfm7kgbghz368yw662gl"; depends=[crul data_table jsonlite plyr reshape stringr tibble xml2]; }; - bomrang = derive2 { name="bomrang"; version="0.1.1"; sha256="1r1k8ridclmlsbrwlrjh7syw4fy3q1hf2rpi2xssh7gg2n709cjb"; depends=[curl data_table dplyr foreign hoardr httr janitor jsonlite magrittr raster readr rgdal rvest tidyr xml2]; }; + bomrang = derive2 { name="bomrang"; version="0.1.4"; sha256="00pzhqqk037hc8zl52f185lnj058vg2adzg0fsndvp83h2wghnd7"; depends=[curl data_table dplyr foreign hoardr httr janitor jsonlite magrittr raster readr rgdal rvest tidyr xml2]; }; bookdown = derive2 { name="bookdown"; version="0.7"; sha256="1b3fw1f41zph5yw3kynb47aijq53vhaa6mnnvxly72zamyzdf95q"; depends=[htmltools knitr rmarkdown tinytex xfun yaml]; }; bookdownplus = derive2 { name="bookdownplus"; version="1.3.2"; sha256="0vkivgjfmqy2xfs75w8ylkpgcvca294q61jrhbpg24vnll3c281n"; depends=[bookdown knitr yaml]; }; boolean3 = derive2 { name="boolean3"; version="3.1.6"; sha256="00s6ljhqy8gpwa3kxfnm500r528iml53q364bjcl4dli2x85wa9p"; depends=[lattice mvtnorm numDeriv optimx rgenoud rlecuyer]; }; @@ -4675,7 +4765,7 @@ in with self; { bossMaps = derive2 { name="bossMaps"; version="0.1.0"; sha256="0w4ks1xicvfm8ari4fr18wjm0qj2nxdsapl6lpfjz8l1id0y78cg"; depends=[doParallel foreach ggplot2 raster rgdal rgeos scales sp tidyr]; }; boussinesq = derive2 { name="boussinesq"; version="1.0.3"; sha256="1j1jarc3j5rby1wvj1raj779c1ka5w68z7v3q8xhzjcaccrjhzxk"; depends=[]; }; boxcoxmix = derive2 { name="boxcoxmix"; version="0.15"; sha256="0qvlk3kcvqzrak2rvf41fs8421fpfh3ch51rq0c9ac62x2dkfidh"; depends=[qicharts statmod]; }; - boxoffice = derive2 { name="boxoffice"; version="1.0.1"; sha256="0s8zx6n203l2cszq4xrwvazpw1fl36g1cln8n9sh20vyqrdcbgvh"; depends=[rvest xml2]; }; + boxoffice = derive2 { name="boxoffice"; version="1.1.0"; sha256="08b897dp5cfv6f30k2pdvh8y5n1981msnjr6lfs4dzfc1i6y2zfy"; depends=[httr rvest]; }; boxplotdbl = derive2 { name="boxplotdbl"; version="1.2.2"; sha256="01bvp6vjnlhc4lndxwd705bzlsh7zq0i9v66mxszrcz6v8hb9rwi"; depends=[]; }; boxr = derive2 { name="boxr"; version="0.3.4"; sha256="0wx3x65rk1ma8bw5h4yskr7ii95ynkm7il22l1bj34kv9f4bfyj3"; depends=[assertthat bit64 digest dplyr httpuv httr mime rio stringr]; }; bpa = derive2 { name="bpa"; version="0.1.1"; sha256="0np7q1nasrq4j7ssaipvbjgrsi9n612p9lp96frq1dgix95mcgf0"; depends=[magrittr plyr]; }; @@ -4694,7 +4784,7 @@ in with self; { brant = derive2 { name="brant"; version="0.2-0"; sha256="1hdwdrdl6ad112zd7q248am3qk19alnj647nrk9xxxgd7s6a9pnb"; depends=[MASS Matrix]; }; brazilmaps = derive2 { name="brazilmaps"; version="0.1.0"; sha256="1nvd8x4m4m3966qph6390kqwpsrv7vy4yf6pam98xxkjbl9a41nf"; depends=[dplyr ggplot2 magrittr sf sp]; }; brea = derive2 { name="brea"; version="0.2.0"; sha256="0mb043fdhxrg9gyf4g55ydjx37j20394nvd4d0fmiym98lccyi04"; depends=[]; }; - breakDown = derive2 { name="breakDown"; version="0.1.4"; sha256="0mxn38pg95ih2p2gk2nayzwn6h8dhvsk46g0ndrhrr3l9nkbij3w"; depends=[ggplot2]; }; + breakDown = derive2 { name="breakDown"; version="0.1.5"; sha256="0m9lpd42ypspkwgwfi0pxkhg4xkrnzirm9d9rjxxf1a6y741ijl2"; depends=[ggplot2]; }; breakage = derive2 { name="breakage"; version="1.1-1"; sha256="0zjazyz92criiimpz4wyd4hd8ccspvh3hhqpd4qkfdzdf9wp3kns"; depends=[Imap]; }; breakaway = derive2 { name="breakaway"; version="3.0"; sha256="0y3h7gifv279z3x77jmr97c0i3vy58m5wsr8pa2vyn26m02rbkpc"; depends=[]; }; breakfast = derive2 { name="breakfast"; version="1.0.0"; sha256="0p0svsqphd5w99pf5c5jmak1xxl8md881lapa8aps9xr73m4x6lf"; depends=[plyr]; }; @@ -4703,7 +4793,7 @@ in with self; { breathteststan = derive2 { name="breathteststan"; version="0.4.0"; sha256="13wqb33gvzmjpgzqyyadydz5hnqcran80azaxbixj7wga0c35pqq"; depends=[BH breathtestcore dplyr purrr Rcpp RcppEigen rstan StanHeaders stringr tibble tidyr]; }; brew = derive2 { name="brew"; version="1.0-6"; sha256="1vghazbcha8gvkwwcdagjvzx6yl8zm7kgr0i9wxr4jng06d1l3fp"; depends=[]; }; brglm = derive2 { name="brglm"; version="0.6.1"; sha256="17r3az6za98v2r06aak77kypdaqssc9wxcc6m6vb20y7xm8dp1mp"; depends=[profileModel]; }; - brglm2 = derive2 { name="brglm2"; version="0.1.7"; sha256="04hfvb0s6xjswv9f1z2aa80j490jcpf3jlplb4s576hc3fd8qqda"; depends=[enrichwith lpSolveAPI MASS Matrix nnet]; }; + brglm2 = derive2 { name="brglm2"; version="0.1.8"; sha256="017m7nlh29p271dhvx19l6042qfs48hqs947kjmpc7ykzv5461y3"; depends=[enrichwith lpSolveAPI MASS Matrix nnet]; }; bride = derive2 { name="bride"; version="1.3"; sha256="03k9jwklg1l8sqyjfh914570880ii0qb5dd9l0bg0d0qrghbj0rk"; depends=[]; }; bridgedist = derive2 { name="bridgedist"; version="0.1.0"; sha256="0hqkpwpi3nv6mfhljl65zcflf4wy72ag36hdam6s7kynfj41qz6w"; depends=[]; }; bridger2 = derive2 { name="bridger2"; version="0.1.0"; sha256="0clp42nnbvd01n65azdi2ghp0mfqwsipzdl2d30q04lcvfkdpxrf"; depends=[BSDA data_table ggplot2 outliers plotly shiny shinydashboard]; }; @@ -4711,21 +4801,21 @@ in with self; { briskaR = derive2 { name="briskaR"; version="0.1.1"; sha256="0w614lb94vim6wlzj13gnfgkq0vg9fjlvwvvs11pnqq501qn2hzl"; depends=[deldir fftwtools fields MASS mvtnorm pracma raster rgdal rgeos sp]; }; brlrmr = derive2 { name="brlrmr"; version="0.1.5"; sha256="14dnmh062fw11bm236ilaqs6ss4ywajvsk3sxj0zwqk2bjf7y7vh"; depends=[boot brglm MASS profileModel Rcpp]; }; brm = derive2 { name="brm"; version="1.0"; sha256="0h4kgig28hkqv1amadznc0n9256dx613rxbn8s8si11ygx79x2dd"; depends=[]; }; - brms = derive2 { name="brms"; version="2.1.0"; sha256="1ahm539add6g26vfj8szmpcwkhnkjcqqqq35mfryrp94yslb6a8n"; depends=[abind bayesplot bridgesampling coda ggplot2 loo Matrix matrixStats mgcv nleqslv nlme Rcpp rstan rstantools shinystan]; }; + brms = derive2 { name="brms"; version="2.2.0"; sha256="1wdf5bka51pwdzniwmi6vwry1lms27124zbrmzm7f7b9k6bsqv3k"; depends=[abind bayesplot bridgesampling coda ggplot2 loo Matrix matrixStats mgcv nleqslv nlme Rcpp rstan rstantools shinystan]; }; brnn = derive2 { name="brnn"; version="0.6"; sha256="0q3f3cbl89hgpav7bn54s13cysgz8fi0zm8byc9rgz0sqkjrxval"; depends=[Formula]; }; broman = derive2 { name="broman"; version="0.67-4"; sha256="1jv1543zq74zjdrmhkcrjwxhn9bmsmmwadd9rjnn18svnrbnlq0g"; depends=[assertthat ggplot2 jsonlite RPushbullet]; }; - broom = derive2 { name="broom"; version="0.4.3"; sha256="119pc2jnxvm13cvd77c7d14p3bn68f4jm310vj3yfck40101n9if"; depends=[dplyr nlme plyr psych reshape2 stringr tidyr]; }; + broom = derive2 { name="broom"; version="0.4.4"; sha256="081x87sy6dmfvkgwfjrl5ax51k77ciyzg9x3xql25vdi92rmwj3m"; depends=[dplyr nlme plyr psych reshape2 stringr tidyr]; }; brotli = derive2 { name="brotli"; version="1.1"; sha256="1jdhc03ycafjm6zfl9m95pd3krkb94mq2lhfjchfjc876mbam8x6"; depends=[]; }; brr = derive2 { name="brr"; version="1.0.0"; sha256="050ivnqcaxiyypd1sxfpy6ianhzzmvs6c77ga40g3440cvfigkgw"; depends=[gsl hypergeo pander stringr SuppDists TeachingDemos]; }; brranching = derive2 { name="brranching"; version="0.2.0"; sha256="0y99px2m02rl60qgf6pjbjv6isp8v1w9sny6p2icgsx4bwxjxmns"; depends=[ape curl httr phytools taxize]; }; - brt = derive2 { name="brt"; version="1.1.0"; sha256="11a6zpdml5vz3kcdcajw5zcck1zbp4kfdkqm3y6q7qj8ym2f12q5"; depends=[ggplot2]; }; + brt = derive2 { name="brt"; version="1.2.0"; sha256="04srx4xfx89lg79krckazlfq0hqph39h01sg6fk1ra8fv2xrcnw4"; depends=[ggplot2]; }; bsam = derive2 { name="bsam"; version="1.1.2"; sha256="1m2lpqm2i4i35hzr1iylrb8skx8rsys3w542xjyqw030bs7b1rdk"; depends=[coda dplyr ggplot2 gridExtra lubridate msm mvtnorm rjags rworldxtra sp tibble]; }; bsamGP = derive2 { name="bsamGP"; version="1.1.2"; sha256="037xgkmcli24jiqahxcingyx97q0jci2ahahcpn3xbzixa161rvf"; depends=[ggplot2 gridExtra MASS]; }; bsearchtools = derive2 { name="bsearchtools"; version="0.0.61"; sha256="11fqz8kdhqpc3jq34vgv3frzawgsl5y0s83rb2p54yb5yhd3p68w"; depends=[Rcpp]; }; bshazard = derive2 { name="bshazard"; version="1.0"; sha256="151c63pyapddc4z77bgkhmd7rsa1jl47x8s2n2s8yc6alwmj6dvs"; depends=[Epi survival]; }; bspec = derive2 { name="bspec"; version="1.5"; sha256="0jynvir7z4q1vrvhdn6wijdrjfrkk4544nlawabw2fnfxss91a91"; depends=[]; }; - bsplinePsd = derive2 { name="bsplinePsd"; version="0.2.0"; sha256="0fxm53sdlxjrvwvlihar8iwzin7ajkzvnm3h3nbzh37lf00gz0sb"; depends=[Rcpp]; }; - bsplus = derive2 { name="bsplus"; version="0.1.0"; sha256="1hpjrmsn66brf1hpwfmg55jbpwbhvkz7sbr160z1cgq3hdhqm7r8"; depends=[htmltools lubridate magrittr purrr rmarkdown stringr]; }; + bsplinePsd = derive2 { name="bsplinePsd"; version="0.5.0"; sha256="1ddvkn182r48fbjqkiskb94afy942bnl953n0cghza4wkbkdfprd"; depends=[Rcpp]; }; + bsplus = derive2 { name="bsplus"; version="0.1.1"; sha256="0s3407z48b7sdbkjkqcjk2j1wvs0z7chvdjzphil83l0vp3j5x0s"; depends=[glue htmltools lubridate magrittr purrr rmarkdown stringr]; }; bspmma = derive2 { name="bspmma"; version="0.1-1"; sha256="0bd6221rrbxjvabf1lqr9nl9s0qwav47gc56sxdw32pd99j9x5a9"; depends=[]; }; bssm = derive2 { name="bssm"; version="0.1.4"; sha256="0wrai7s5sdjykiz8c5qrlcscm1awfz9cjaggarrs83h9fcs3n38x"; depends=[BH coda diagis ggplot2 ramcmc Rcpp RcppArmadillo sitmo]; }; bssn = derive2 { name="bssn"; version="0.7"; sha256="1g2xhb7bqapwd5zbc4bl4h1fskd7k6gd0rz74hnydiiwxrwiihf6"; depends=[sn]; }; @@ -4740,7 +4830,7 @@ in with self; { bullwhipgame = derive2 { name="bullwhipgame"; version="0.1.0"; sha256="03nwf2v4zhgkxvkghpkbkxz0cnkqcwwl51ykrk25qciakfqkgfws"; depends=[shiny]; }; bunchr = derive2 { name="bunchr"; version="1.2.0"; sha256="1b8hdg2x26k0ahx4gxdpzr36hy056939r4496q3vbgyd4bbk2fbd"; depends=[shiny]; }; bundesligR = derive2 { name="bundesligR"; version="0.1.0"; sha256="0dnhbh9jh7dfbk7mfh8msq4ys5kakalr0kwkycycrb2q8rd049vp"; depends=[]; }; - bupaR = derive2 { name="bupaR"; version="0.3.2"; sha256="08xkf88fx8wn22vzn2ghm1jagh09pafqgmx41k99vrqkl3nrfm58"; depends=[data_table dplyr forcats glue magrittr miniUI purrr rlang shiny tidyr]; }; + bupaR = derive2 { name="bupaR"; version="0.4.0"; sha256="197ibs7jmbn823skg18zm1kqr2p35bxrd6bw22vjlj6b10r4nqhi"; depends=[data_table dplyr eventdataR forcats glue magrittr miniUI purrr rlang shiny tidyr]; }; burnr = derive2 { name="burnr"; version="0.2.2"; sha256="1b5ys0jm2dmiz1jd5f3907dhv44wh60kmfdfhj3fzx8rk7zllm06"; depends=[ggplot2 MASS plyr reshape2]; }; bursts = derive2 { name="bursts"; version="1.0-1"; sha256="172g09d1vmwl83xs6gr4gfblqmx3apvblpzdr5d7fcw1ybsx0kj6"; depends=[]; }; bvarsv = derive2 { name="bvarsv"; version="1.1"; sha256="1bv4fbbi8bn7sqqpjlf8w5jpgydjr15wv5v9940wc42yk792yjrx"; depends=[Rcpp RcppArmadillo]; }; @@ -4752,16 +4842,15 @@ in with self; { c212 = derive2 { name="c212"; version="0.93"; sha256="10gwkr2w05bi27zwvspm3g31a1dpqbh1i52vyrfaamqkxypa11nh"; depends=[coda]; }; c2c = derive2 { name="c2c"; version="0.1.0"; sha256="149np512wjnlr9glmqxpiamf6c31v0bh6ym95jpdhk0iw3ic9kvh"; depends=[]; }; c3net = derive2 { name="c3net"; version="1.1.1"; sha256="0m4nvrs41kmlakc6m203zlncqwgj94wns8kzcb31xngjcacmcq42"; depends=[igraph]; }; - cAIC4 = derive2 { name="cAIC4"; version="0.2"; sha256="13sp3wywv82wgi1vsbxwn68v9xigy0fi3mcwyxjmmgmnsxns2fza"; depends=[lme4 Matrix]; }; + cAIC4 = derive2 { name="cAIC4"; version="0.3"; sha256="1y12y2hk5fjhqfjbrkxl62nk0y0n1x5dh3zmiw7hqbka6i2bzsy7"; depends=[lme4 Matrix]; }; cIRT = derive2 { name="cIRT"; version="1.2.1"; sha256="1i43pqlyzykyd1a6abg1yi7ai9ay7d2jkvnw1sa4c6q07jk56d89"; depends=[Rcpp RcppArmadillo]; }; cOde = derive2 { name="cOde"; version="0.3"; sha256="1r49q7qansn86wrxbhxqnn1dccd9av4lh4h5pn9kk42pls9q60nf"; depends=[Rcpp RcppArmadillo]; }; - cRegulome = derive2 { name="cRegulome"; version="0.1.0"; sha256="0yf5kx583k483rs3vw614qfv92k3c8gld8vsw16j1vlsbrasbiah"; depends=[DBI dplyr ggplot2 ggridges httr magrittr purrr R_utils reshape2 RSQLite tidyr UpSetR VennDiagram]; }; + cRegulome = derive2 { name="cRegulome"; version="0.1.1"; sha256="0rhi4f1wkl03vh9m6hsba08cfvqjfn99xyxsykv625bgxra817bd"; depends=[AnnotationDbi clusterProfiler DBI dplyr ggplot2 ggridges httr magrittr org_Hs_eg_db purrr R_utils reshape2 RSQLite tidyr UpSetR VennDiagram]; }; cSFM = derive2 { name="cSFM"; version="1.1"; sha256="1znxsqa8xdifmryg7jiqbpzm837n4n862kg5x1aki52crc4zyk3k"; depends=[MASS mgcv mnormt moments sn]; }; ca = derive2 { name="ca"; version="0.70"; sha256="0730c7nk49hz0k1i5nnhq2j3wbhrlhr1qvb50mk8vmqkbhb1pz1l"; depends=[]; }; caRamel = derive2 { name="caRamel"; version="1.0"; sha256="0al4yk77a4bh8rjdpl841bnnjvs0sjyxqswqwik1n6y0bfr8f7pl"; depends=[geometry]; }; caRpools = derive2 { name="caRpools"; version="0.83"; sha256="10m7fw1zfr9i6v2qg235diwf3fmfr88incxnqpvnhmqcn082mxrp"; depends=[biomaRt DESeq2 rmarkdown scatterplot3d seqinr sm VennDiagram xlsx]; }; caTools = derive2 { name="caTools"; version="1.17.1"; sha256="1x4szsn2qmbzpyjfdaiz2q7jwhap2gky9wq0riah74q0pzz76ank"; depends=[bitops]; }; - cablecuttr = derive2 { name="cablecuttr"; version="0.1.1"; sha256="1v3zhaxkp1h6lack2qk0v4zxh6fd0ymjnikw6bs7k540w2vrbs1g"; depends=[httr jsonlite]; }; cabootcrs = derive2 { name="cabootcrs"; version="1.0"; sha256="0a6y04jq837k1pk8b9nhgz7rima7s8jid6vdjyfvrqshgaiabg1q"; depends=[]; }; cacIRT = derive2 { name="cacIRT"; version="1.4"; sha256="145j6isqa8yj2nvlqkxagd076zs10ng3n44khi5p4jj77fjc8gh6"; depends=[]; }; caesar = derive2 { name="caesar"; version="0.1.0"; sha256="1l0z64fsifx37j2h61kzygbwr3z3cncn48znrpb5cq10ma42igqf"; depends=[binhf]; }; @@ -4771,7 +4860,7 @@ in with self; { calibrar = derive2 { name="calibrar"; version="0.2.0"; sha256="1544bc5rhhc6d1mky7ngza00wwh63q07dkbzlwfgyavly8m9cplb"; depends=[cmaes foreach optimx]; }; calibrate = derive2 { name="calibrate"; version="1.7.2"; sha256="010nb1nb9y7zhw2k6d2i2drwy5brp7b83mjj2w7i3wjp9xb6l1kq"; depends=[MASS]; }; calibrator = derive2 { name="calibrator"; version="1.2-6"; sha256="1arprrqmczbhc1gl85fh37cwpcky8vvqdh6zfza3hy21pn21i4kh"; depends=[cubature emulator]; }; - callr = derive2 { name="callr"; version="2.0.2"; sha256="0m51p39vfwldxv6h8x4y9w3laf8q9bldhfqhlcrlx3xhy3irb1bp"; depends=[assertthat crayon debugme R6 testthat]; }; + callr = derive2 { name="callr"; version="2.0.3"; sha256="1k3mflgn10hcvy74y4pbigpv74zb66fz1phfd3c8isqmn88xbxzi"; depends=[assertthat crayon debugme R6 testthat]; }; calmate = derive2 { name="calmate"; version="0.12.1"; sha256="07sjbq7bcrhal52pdzsb5pfmk6a8a44wg8xn79sv4y5v74c5xaqz"; depends=[aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; }; camel = derive2 { name="camel"; version="0.2.0"; sha256="0krilird8j69zbll96k46pcys4gfkcnkisww138wslwbicl52334"; depends=[igraph lattice MASS Matrix]; }; camsRad = derive2 { name="camsRad"; version="0.3.0"; sha256="06gar6qan1ka01ngjvbpcv649yvfga697mplwn1x6qnfr4ngb7cs"; depends=[httr xml2]; }; @@ -4781,23 +4870,23 @@ in with self; { cancerTiming = derive2 { name="cancerTiming"; version="3.1.8"; sha256="1sfi8q2f5ag7iak0sf9pmqncb89w3gnxdiwjwpivkwhr28ais4mq"; depends=[gplots LearnBayes]; }; candisc = derive2 { name="candisc"; version="0.8-0"; sha256="0hq5bwvq791rhff2c29xdjbbkcyydii1lbsy05c1fapyn88ir0mi"; depends=[car heplots]; }; canprot = derive2 { name="canprot"; version="0.1.1"; sha256="14g7wl4p9bgwf5jm48mp676z0pwlsd2xgxjwzixri7mxxh0ivfh1"; depends=[CHNOSZ xtable]; }; - canvasXpress = derive2 { name="canvasXpress"; version="1.18.5"; sha256="052qwymd28pi4c5pkdrwb85r1f1342y46fpirz2mrspx9r877d7h"; depends=[htmlwidgets]; }; + canvasXpress = derive2 { name="canvasXpress"; version="1.19.0"; sha256="1cxfadvrm3gkrdfibwi1b7kqlc3hczyc0g72v5gkgc9hssb8j46i"; depends=[htmlwidgets]; }; cape = derive2 { name="cape"; version="2.0.2"; sha256="0ngm9scd3f2zcy7gy0lqk05cgbfrhhcss3mj5g6bj0byhgwd7msn"; depends=[corpcor doParallel evd fdrtool foreach HardyWeinberg igraph Matrix qpcR RColorBrewer regress shape]; }; - caper = derive2 { name="caper"; version="0.5.2"; sha256="1l773sxmh1nyxlrjz8brnwhwraff826scwixrqmgdciqk7046d35"; depends=[ape MASS mvtnorm]; }; + caper = derive2 { name="caper"; version="1.0.1"; sha256="0md0sngj7wsv2d4d7fmyyz9qqismk3ps9l3qk1blqz1yi19pq124"; depends=[ape MASS mvtnorm]; }; capm = derive2 { name="capm"; version="0.11.0"; sha256="1yw7h1r5m4md8yv0fn1j4wxvhwybifqyvrn8ip3fl32kxbwsmnvz"; depends=[deSolve FME ggplot2 maptools reshape2 rgdal shiny sp survey]; }; capn = derive2 { name="capn"; version="1.0.0"; sha256="14vfk00xyx0az3whmxjpcv1785lf0gx81w7qc54i3wcfp3i22kcr"; depends=[]; }; captioner = derive2 { name="captioner"; version="2.2.3"; sha256="0xg72pmgm84f0v45phfwxpsslhf12nhn1swmrj1yifj7g9sjvybj"; depends=[]; }; captr = derive2 { name="captr"; version="0.3.0"; sha256="13j2nq9hm37g4h5fjdpz7kix0sqajdd7zssjfgil06ixfmnsijkx"; depends=[curl jsonlite]; }; capushe = derive2 { name="capushe"; version="1.1.1"; sha256="1aa76ir1kp67hiz7dr60azyc71yzslshyc640fjh0fpw0sp5kwbc"; depends=[MASS]; }; capwire = derive2 { name="capwire"; version="1.1.4"; sha256="18a3dnbgr55yjdk6pd7agmb48lsiqjpd7fm64dr1si6rpgpl4i9c"; depends=[]; }; - car = derive2 { name="car"; version="2.1-6"; sha256="14l4d9j87xnb0bz2wgqqbxnlnbcdfb5vx2fw6kdxj91kyrk6lhnj"; depends=[MASS mgcv nnet pbkrtest quantreg]; }; - carData = derive2 { name="carData"; version="3.0-0"; sha256="1ggz4py77bgwlpl6rsv7vlxj1kjs6c10dskizwwjps910r76pd79"; depends=[]; }; + car = derive2 { name="car"; version="3.0-0"; sha256="1ks2jaav8lbxhzw56vpbnysjk3pvpmqh6avd574k0bha1226k81h"; depends=[abind carData lme4 maptools MASS mgcv nlme nnet pbkrtest quantreg rio]; }; + carData = derive2 { name="carData"; version="3.0-1"; sha256="193pdwgw6gk19v7swk1kwphg3vqdmpsgi555g9nyz93sa39j7r8j"; depends=[]; }; carSurv = derive2 { name="carSurv"; version="1.0.0"; sha256="0wv7lp10i4sdfqyizg77ghblp3pcp7wzhs946sm0wl6w00krav9j"; depends=[corpcor fdrtool mboost Rcpp survival]; }; carcass = derive2 { name="carcass"; version="1.6"; sha256="0nhp35nxjqqmy15rf9vc0qyymy7d0v8mc84570b9nc62g5xac8xy"; depends=[arm expm lme4 MASS survival]; }; cardidates = derive2 { name="cardidates"; version="0.4.7"; sha256="0dxb2941w56s479laf315hqh9iv3k2l1ds7k8hdl9akcacagjgs2"; depends=[boot lattice pastecs]; }; cardioModel = derive2 { name="cardioModel"; version="1.4"; sha256="1a2nvn4a4zc89pb01m20pxqgbj0ypzzvx9w2vfzwly1kzkhvc9hr"; depends=[lubridate nlme]; }; care = derive2 { name="care"; version="1.1.10"; sha256="00h36by40v60mqzbf615a99sdfz0i42i57wybxrcm7y1y2la0da8"; depends=[corpcor]; }; - caret = derive2 { name="caret"; version="6.0-78"; sha256="0h1nxzii2h80aslp1zsjczrlfmaks44sskabk4yq9c5rafc7ka6y"; depends=[foreach ggplot2 lattice ModelMetrics nlme plyr recipes reshape2 withr]; }; + caret = derive2 { name="caret"; version="6.0-79"; sha256="1i6sjw279g6mj83vz5gv99x0nljcbpy7v0nbl72lmd80sf7rjshl"; depends=[foreach ggplot2 lattice ModelMetrics nlme plyr recipes reshape2 withr]; }; caretEnsemble = derive2 { name="caretEnsemble"; version="2.0.0"; sha256="0v9gyp81abrbm8b79ch927iqh0v84q5222bvg1wx8n65vx59sx42"; depends=[caret data_table digest ggplot2 gridExtra lattice pbapply plyr]; }; carfima = derive2 { name="carfima"; version="1.0.0"; sha256="0bxk254q916w5h5zyyp2bs6nvbmbzqfx3jr4a80fkgbmr49chzzp"; depends=[DEoptim invgamma MASS numDeriv truncnorm]; }; caribou = derive2 { name="caribou"; version="1.1"; sha256="0ibl3jhvsgjfcva0113z0di9n5n30bs90yz0scckfv1c0pjhn4xd"; depends=[]; }; @@ -4809,13 +4898,13 @@ in with self; { caschrono = derive2 { name="caschrono"; version="2.0"; sha256="091zqin2cr9p50zmifrb52dxy10zflm7f0lr9nissy589qjdd0gk"; depends=[Hmisc zoo]; }; caseMatch = derive2 { name="caseMatch"; version="1.0.7"; sha256="1xd7mlnknjrilxcp0w0b36aaiql6jdqgyin1823r2x8vl9r4aqns"; depends=[]; }; casebase = derive2 { name="casebase"; version="0.1.0"; sha256="0216qzyxv44cl9f806lal9lx4n0zzr9csx8ggyjva04h5iiqrq6w"; depends=[data_table ggplot2 survival VGAM]; }; - castor = derive2 { name="castor"; version="1.3.2"; sha256="0pz02wbm9w3mkp2gmnl92zgv1b63dvcp6j374hqjgxxpc79aw30m"; depends=[naturalsort Rcpp]; }; + castor = derive2 { name="castor"; version="1.3.3"; sha256="0n7d4225g28c3i4w4n9bdd8zz91kr80vvnajpn5433db71bqrrv8"; depends=[naturalsort Rcpp]; }; cat = derive2 { name="cat"; version="0.0-6.5"; sha256="1gv7chqp6kccipkrxjwhsa7yizizsmk4pj8672rgjmpfcc64pqfm"; depends=[]; }; catIrt = derive2 { name="catIrt"; version="0.5-0"; sha256="09010z1q96nbnpys6mybspaqy57lvgd2cvwgnfijzgx3kl87pwnl"; depends=[numDeriv]; }; catR = derive2 { name="catR"; version="3.13"; sha256="1xzxgf9d33h46qxz6a8d71mi673yzdnvxcxj073z7y19hjss3pkw"; depends=[]; }; catSurv = derive2 { name="catSurv"; version="1.0.3"; sha256="1qjmjdmc81inim5kpwh4k2r3cffmkyp2wpcqqzv731hciqrad8a8"; depends=[BH ltm Rcpp RcppArmadillo RcppGSL RcppParallel]; }; catcont = derive2 { name="catcont"; version="0.3.0"; sha256="1gz7bh3xi7x7clbwa7qvy64nqx5g6dfkyxysick2razr47dac0y1"; depends=[]; }; - catdap = derive2 { name="catdap"; version="1.2.4"; sha256="0vvrlbdjml1cxf6jafjycv0k3kzd2xy1zcwjv0rh3cswxmvpnh3a"; depends=[]; }; + catdap = derive2 { name="catdap"; version="1.3.4"; sha256="0i877l61f6c75pczi235rzci67w29zv1d7z5zn5p5ymndclvlpl2"; depends=[]; }; catdata = derive2 { name="catdata"; version="1.2.1"; sha256="0fjylb55iw8w9sd3hbg895pzasliy68wcq95mgrh7af116ss637w"; depends=[MASS]; }; cate = derive2 { name="cate"; version="1.0.4"; sha256="0qck6675xm5xbw440m1b6n38wjwk7izx3s0zpxbmhc9wh12c5prk"; depends=[corpcor esaBcv leapp MASS ruv sva]; }; catenary = derive2 { name="catenary"; version="1.1.1"; sha256="0gd46zvd51xvra0d7k7qdcmfl71vcfk750lcafkhmr4cg0vkqcz7"; depends=[boot ggplot2]; }; @@ -4833,6 +4922,7 @@ in with self; { cba = derive2 { name="cba"; version="0.2-19"; sha256="0nyssc7j5rkv1gcgx4cg31hwc37wd5k3yn9s2k22ffxlnrknss2l"; depends=[proxy]; }; cbanalysis = derive2 { name="cbanalysis"; version="0.2.0"; sha256="0h0h8krlb6rckjpcw0jbbr8pcy3jm0cszimbm56l0ca668kiix06"; depends=[]; }; cbar = derive2 { name="cbar"; version="0.1.3"; sha256="1jy52qnpjvszdd8xviv3vr00ds6bah73q0mhd4kixf68jafnxd35"; depends=[Boom bsts dplyr ggplot2 magrittr]; }; + cbinom = derive2 { name="cbinom"; version="0.0.0"; sha256="1bg4jq67wr4hd6bxf5477wcmns3r956sgw2lm9gw1d4znvz5x3vf"; depends=[Rcpp]; }; cbird = derive2 { name="cbird"; version="1.0"; sha256="0kzylylk46swd7f0j6kjyrcs3plbx9799q9kb8hjxmgh0qcjk2p6"; depends=[]; }; cbsodataR = derive2 { name="cbsodataR"; version="0.2.5"; sha256="1dc4hbida1fbxin22paa31c0f4xj1pqzcc4649p7lbygqvf1fhqh"; depends=[httr jsonlite whisker yaml]; }; ccChooser = derive2 { name="ccChooser"; version="0.2.6"; sha256="1vgp4zhg46hcf9ma2cmwgnfrqkmq1arh0ahyzjpfk3817vh7disc"; depends=[cluster]; }; @@ -4850,12 +4940,12 @@ in with self; { cclust = derive2 { name="cclust"; version="0.6-21"; sha256="1n5hh0017bcq8ck52qq89jm9zgdfpmiksrypsnv2vvhk3nr0s91c"; depends=[]; }; ccmm = derive2 { name="ccmm"; version="1.0"; sha256="0855nr74xxpy7in2vrw15g8pv7nm1374irc1c5hikr5hadk5pf8v"; depends=[MASS]; }; cctools = derive2 { name="cctools"; version="0.1.1"; sha256="1baqijxg75wr90y38d5g1gg8jmpz8ji7zv51wp9n1knif27rg348"; depends=[qrng Rcpp RcppArmadillo]; }; - cdata = derive2 { name="cdata"; version="0.5.2"; sha256="0l0vqmvizvb7h31796yjbyd0wspxvl3zx64xarkqpq8vwqwkfv51"; depends=[DBI RSQLite wrapr]; }; + cdata = derive2 { name="cdata"; version="0.7.0"; sha256="1s35wibqs2bklyi8y4j2jxfj7b5jjap2rib3pmh92da3n5jx049l"; depends=[wrapr]; }; cdb = derive2 { name="cdb"; version="0.0.1"; sha256="1rdb4lacjcw67apdyiv7cl1xvv9d1mrzck1qk605n6794k7wf2ys"; depends=[bitops]; }; cdcfluview = derive2 { name="cdcfluview"; version="0.7.0"; sha256="00yc3q28y20l2ppqxy6h53p9fvwhvpkc8m7csmp2lizqh787i2cc"; depends=[dplyr httr jsonlite MMWRweek purrr readr sf units xml2]; }; cdcsis = derive2 { name="cdcsis"; version="1.0"; sha256="1fxdsaqpjhpffn2fxddfcrx8wxwyvfws6rxkpp57g25980xiyzkd"; depends=[ks]; }; cdfquantreg = derive2 { name="cdfquantreg"; version="1.2.0"; sha256="1z9a2rivi1i56369hkz94azfhyqch8wph819lgrxlrr4mcpl6k2p"; depends=[Formula MASS pracma]; }; - cdlTools = derive2 { name="cdlTools"; version="0.11"; sha256="0jqr0j6hwqwx574659i3mfzf4hcmmxfd3x28d52dwgpwsv0r10gn"; depends=[raster RCurl rgdal XML]; }; + cdlTools = derive2 { name="cdlTools"; version="0.13"; sha256="0zcw7k936mxk7ysjaqj9z3lw3vycbcnp6jhwqqysvd8n62nph24n"; depends=[httr raster]; }; cdom = derive2 { name="cdom"; version="0.1.0"; sha256="00xqqqhskjlkz8ii7kqyabxk8995w7g9jiz1isyqjpwg8nsa3x28"; depends=[broom ggplot2 minpack_lm tidyr]; }; cdparcoord = derive2 { name="cdparcoord"; version="1.0.0"; sha256="0a08rpc7chqbix10jimjh46dy6val97mrzqk972pq446b6ci95sn"; depends=[data_table freqparcoord magrittr partools plotly]; }; cds = derive2 { name="cds"; version="1.0.3"; sha256="1h34k96h7ajkaqsw4dlqri63hrbnshaqwrdl74wlgycdlbvrqj05"; depends=[clue colorspace copula limSolve MASS]; }; @@ -4866,7 +4956,7 @@ in with self; { cellVolumeDist = derive2 { name="cellVolumeDist"; version="1.3"; sha256="00hq3nbfbnmg2lhrqd0glkh5ld50fv54ll3q6v875d1lgs44sln1"; depends=[gplots minpack_lm]; }; cellWise = derive2 { name="cellWise"; version="2.0.8"; sha256="1xahayqlpylysdiqggzqh7z75r3ldi79bx124ky84r1vab659lm7"; depends=[ggplot2 gridExtra matrixStats Rcpp RcppArmadillo reshape2 scales]; }; cellranger = derive2 { name="cellranger"; version="1.1.0"; sha256="16fgi3annn34c3cxi0pxf62mmmmxi21hp0zzlv7bkfsjqy4g4f2x"; depends=[rematch tibble]; }; - cem = derive2 { name="cem"; version="1.1.17"; sha256="1jnhsrc1jhax3zlw9ynla7g9z5i4w01iar7f7hmv92kp1cwh8rbd"; depends=[combinat lattice MatchIt nlme randomForest]; }; + cem = derive2 { name="cem"; version="1.1.19"; sha256="17i6jp6czjgchg16zndnh828hs8v28x25gy5f8mkzfhc5pfjd8mq"; depends=[combinat lattice MatchIt nlme randomForest]; }; cenGAM = derive2 { name="cenGAM"; version="0.5.3"; sha256="0qic2g2bq24k9jimxdk8g7bsmi4br2r6159ipdhh5ym81ji3sf5p"; depends=[mgcv]; }; censCov = derive2 { name="censCov"; version="1.0-0"; sha256="0i9vmyi12f1m5xnrl4cxk3z9qv7ymzxsyf4gbnpg1ph63yfnhv3g"; depends=[survival]; }; censNID = derive2 { name="censNID"; version="0-0-1"; sha256="1ij5ci6nkqf0rq51vyh4jw5sr3y46yndfkjmwl78ppdj66axxir5"; depends=[]; }; @@ -4888,7 +4978,7 @@ in with self; { cffdrs = derive2 { name="cffdrs"; version="1.7.6"; sha256="00n3h2vf855anxh0xgsps7sv0kj819864wjdmkiak1lsacysav8s"; depends=[data_table doParallel foreach raster rgdal spatial_tools]; }; cg = derive2 { name="cg"; version="1.0-3"; sha256="1kbyal1sicbr10yvxpwgcij710kqpi23vmndp9kyfzn3k8zfird3"; depends=[Hmisc lattice MASS multcomp nlme rms survival VGAM]; }; cgAUC = derive2 { name="cgAUC"; version="1.2.1"; sha256="172f9rkfhv4xzwpw8izsnsdbcw9p3hvxhh0fd8hzlkil7vskr3k8"; depends=[Rcpp]; }; - cgam = derive2 { name="cgam"; version="1.9"; sha256="0hc8q6mdd8fy2229biknissmg95b88kryr4c33yv5j77z6gw3s4y"; depends=[coneproj Matrix svDialogs]; }; + cgam = derive2 { name="cgam"; version="1.10"; sha256="19q90bg32vn7f7znd93a7fz1pjmw1nmfxf4y5y2wfd14qmpwfk36"; depends=[coneproj Matrix svDialogs]; }; cgdsr = derive2 { name="cgdsr"; version="1.2.10"; sha256="1xyhw7mhmjichr1l6f9y1qvfj9wm87kfbm87ji7lcwf36gxh5g23"; depends=[R_methodsS3 R_oo]; }; cggd = derive2 { name="cggd"; version="0.8"; sha256="06z0mrxxc02parn9vkjv89qq4yqmsccsy319fi6c5iarssyvin1r"; depends=[]; }; cgh = derive2 { name="cgh"; version="1.0-7.1"; sha256="1fgjz43bgnswlyvrm669x697lybq3jyzz4l8ppgxqwxp4p4d2yqn"; depends=[]; }; @@ -4906,7 +4996,7 @@ in with self; { checkarg = derive2 { name="checkarg"; version="0.1.0"; sha256="0rkdjs2c4yx9laqgayxz57bwxhwgdh6ndrr4i3b1kh31lcmk1xc6"; depends=[]; }; checkmate = derive2 { name="checkmate"; version="1.8.5"; sha256="1q6igk50lq4fp5d3imgcn1j063h3gsp214ra4nlf534hf4wjlkg9"; depends=[backports]; }; checkpoint = derive2 { name="checkpoint"; version="0.4.3"; sha256="0r7v7ijyq92yd95ssxxbdlp5dv1sd09yvxr8c0yihf48kzw65s63"; depends=[]; }; - checkr = derive2 { name="checkr"; version="0.1.0"; sha256="01071y7jgvang5yi00304wr4p4040b8fc4ncfj6qfmk0bc97h51b"; depends=[]; }; + checkr = derive2 { name="checkr"; version="0.2.0"; sha256="1fy00mxdjfyw37l95gy9qc0ny5v9kn16hv261c8sl1kgnp8zv4a9"; depends=[]; }; cheddar = derive2 { name="cheddar"; version="0.1-631"; sha256="0s6v3xcpv8ppgx6q6h2hgrjcf3f3i87kmylnr9q9zhry7729aiyn"; depends=[]; }; chemCal = derive2 { name="chemCal"; version="0.1-37"; sha256="1sbmr8arczc65nzbgr5rfk2mbbnk6h60ni9cd9jngbhgdf0g1scw"; depends=[]; }; chemmodlab = derive2 { name="chemmodlab"; version="1.0.0"; sha256="0lzibshhfz52m61xldf0xq4cc1xx64fjlw18hlkiv65dj3gcj2mh"; depends=[caret class e1071 elasticnet foreach lars MASS nnet pls pROC randomForest rpart tree]; }; @@ -4919,15 +5009,16 @@ in with self; { chillR = derive2 { name="chillR"; version="0.70.2"; sha256="01hn2b88ra7kadjylj2y840lpkapm93kdracnamy15c6f5f27kmb"; depends=[fields httr Kendall pls raster RCurl readxl RMAWGEN sp XML]; }; chinese_misc = derive2 { name="chinese.misc"; version="0.1.8"; sha256="0c2qhdia7wpkv4x2qnq2lyvgnr0n37brd7m579hcl6zq7dw4y2m7"; depends=[jiebaR Matrix NLP Ruchardet slam stringi tm]; }; chipPCR = derive2 { name="chipPCR"; version="0.0.8-10"; sha256="1mff7n7ga4sfwvcq7zkjkrl68nybnm2zkn37hmxvnw9yl3ls9lnw"; depends=[lmtest MASS outliers ptw quantreg Rfit robustbase shiny signal]; }; - chngpt = derive2 { name="chngpt"; version="2018.1-3"; sha256="0x4jifap8y4gs7mdzawxyvfdfjg245zak2zljdl6351ppslzaj6z"; depends=[boot kyotil MASS survival]; }; + chngpt = derive2 { name="chngpt"; version="2018.3-29"; sha256="0m1va7rknp2lmqdfhlfndhwb6ysn9vi567cc34f33829pdh0y4w3"; depends=[boot kyotil MASS survival]; }; choiceDes = derive2 { name="choiceDes"; version="0.9-1"; sha256="07nnqqczi9p3cffdijzx14sxhqv1imdakj7y94brlr5mbf5i4fl4"; depends=[AlgDesign]; }; - cholera = derive2 { name="cholera"; version="0.3.0"; sha256="08ijini3d4ir26di655315lvs9vjscixpawv8r7499idcb1jz87i"; depends=[alphahull deldir HistData igraph KernSmooth pracma RColorBrewer scales sp]; }; + cholera = derive2 { name="cholera"; version="0.4.0"; sha256="0pm5kbaqkxkwzyda4ms90yivx0iv7hcn2z65xfqcqlsxsjbvlmhs"; depends=[deldir HistData igraph KernSmooth pracma RColorBrewer scales sp]; }; choplump = derive2 { name="choplump"; version="1.0-0.4"; sha256="0fn6m3n81jb7wjdji4v04m53gakjfsj3ksm546xxz5zm7prk237s"; depends=[]; }; chopthin = derive2 { name="chopthin"; version="0.2.2"; sha256="1ixmgq6igd2ji88qba7scny1j8rrizcf76dk4ymk3hah5dln97fz"; depends=[Rcpp]; }; chords = derive2 { name="chords"; version="0.95.4"; sha256="1v6zvl1mv9fyf6hx1fpbj3i7s893n4y1w4j9rw1arps006qz2jqn"; depends=[MASS Matrix]; }; choroplethr = derive2 { name="choroplethr"; version="3.6.1"; sha256="11f529zcflbqbchnp3v5yw2vwrlhyfib5pn2j6l60x0gdfxp07bb"; depends=[acs dplyr ggmap ggplot2 gridExtra Hmisc R6 RgoogleMaps scales stringr tigris WDI]; }; choroplethrAdmin1 = derive2 { name="choroplethrAdmin1"; version="1.1.1"; sha256="13ljs21hdhiv6n4napmk1gjnjhpll6j5wyijzv4xnnbi1y3ns7a9"; depends=[ggplot2]; }; choroplethrMaps = derive2 { name="choroplethrMaps"; version="1.0.1"; sha256="0ghqb2d1h0qkbcsll6ck2qk5sfvdwsrlh3phlbsjbak30832j7fr"; depends=[]; }; + chorrrds = derive2 { name="chorrrds"; version="0.1.3"; sha256="1f4mrf5i5cddgv639cv45b35ff4r96hw7xh47zx04lgm295s5rvy"; depends=[dplyr httr jsonlite magrittr plyr stringr XML]; }; chromer = derive2 { name="chromer"; version="0.1"; sha256="0fzl2ahvzyylrh4247w9yjmwib42q96iyhdlldchj97sld66c817"; depends=[data_table dplyr httr]; }; chromoR = derive2 { name="chromoR"; version="1.0"; sha256="1x11byr6i89sdk405h6jd2rbvgwrcvqvb112bndv2rh9jnrvcw4z"; depends=[gdata haarfisz]; }; chron = derive2 { name="chron"; version="2.3-52"; sha256="185lfp75cv3l4cavg64sccj8lgc5sivch13n6gkannv3pd5cyzy4"; depends=[]; }; @@ -4944,19 +5035,20 @@ in with self; { citbcmst = derive2 { name="citbcmst"; version="1.0.4"; sha256="1zkd117h9nahwbg5z6byw2grg5n3l0kyvv2ifrkww7ar30a2yikl"; depends=[]; }; citccmst = derive2 { name="citccmst"; version="1.0.2"; sha256="1b7awn1hjckxisfdi4ck697hwd4a5sqklwi7xzh6kgqhk9pv7vjn"; depends=[]; }; citr = derive2 { name="citr"; version="0.2.0"; sha256="1nzn0yw74k6zkwzb6spfzqkj3cbx6ry6ypbsnhy6w2flabnnvy4v"; depends=[assertthat curl miniUI RefManageR rstudioapi shiny yaml]; }; - civis = derive2 { name="civis"; version="1.2.0"; sha256="10idsjq5grg9mw18f8v2wqz1rg95s12dsfglkrg7jar1782yq822"; depends=[DBI dbplyr devtools dplyr future ggplot2 httr jsonlite lubridate memoise purrr roxygen2 stringr testthat]; }; + ciuupi = derive2 { name="ciuupi"; version="1.0.0"; sha256="1c72crf0his7vzmh86isvcvi0ahxnqdq4i6ms84hk20jmlz2hxin"; depends=[functional nloptr pracma statmod]; }; + civis = derive2 { name="civis"; version="1.3.0"; sha256="1897b2s23clgwh35r9nvbgd3xbznbn4yxswwwy5rwc3w8yip5brj"; depends=[DBI dbplyr devtools dplyr feather future ggplot2 httr jsonlite lubridate memoise purrr roxygen2 stringr testthat]; }; cjoint = derive2 { name="cjoint"; version="2.0.6"; sha256="1bhzw751ll43qbyif589yxmi3m1pbm206lqnsc5zcxsnxjf4li5n"; depends=[ggplot2 lmtest Matrix sandwich survey]; }; ck37r = derive2 { name="ck37r"; version="1.0.0"; sha256="0nn2sfsfs8mhgjrz0ghn041ybhj2qim4rs3lkci7s4n95c8hbgdi"; depends=[caret cvAUC doParallel doSNOW foreach ggplot2 pryr randomForest RANN reader RhpcBLASctl ROCR snow stringr SuperLearner tmle]; }; ckanr = derive2 { name="ckanr"; version="0.1.0"; sha256="1cvn0cih763f0ppl1y90vnwj3cgqyb7az89sn12nyn2qb6igiqyl"; depends=[httr jsonlite magrittr]; }; clValid = derive2 { name="clValid"; version="0.6-6"; sha256="1l9q7684vv75jnbymaa10md13qri2wjjg7chr1z1m0rai8iq3xxw"; depends=[class cluster]; }; cladoRcpp = derive2 { name="cladoRcpp"; version="0.14.4"; sha256="0d4vl7xrrwbhhx56ymw52rb5svw9nskxdya4dl04lw1qxc45p4jy"; depends=[Rcpp RcppArmadillo]; }; clam = derive2 { name="clam"; version="2.3.1"; sha256="1n30fvx4macyawhzv17bzvc1s4qdn51p9mx28apfjbf80qck24g9"; depends=[]; }; - clampSeg = derive2 { name="clampSeg"; version="1.0-1"; sha256="0y0yxdv75xqmv7v6q8q8v1qj6xr8i7ik4nkh759rpyn0da7qq076"; depends=[Rcpp stepR]; }; + clampSeg = derive2 { name="clampSeg"; version="1.0-3"; sha256="06j0778qzw7lkdf7wrzshn9pikr57xymb3kbxvxcywz6db5c4k47"; depends=[Rcpp stepR]; }; clarifai = derive2 { name="clarifai"; version="0.4.2"; sha256="0igi4xl27nz0r85hpws2zfc2gn5z2nmywp3saxgp74mh2y99lg6s"; depends=[curl jsonlite]; }; class = derive2 { name="class"; version="7.3-14"; sha256="173b8a16lh1i0zjmr784l0xr0azp9v8bgslh12hfdswbq7dpdf0q"; depends=[MASS]; }; classGraph = derive2 { name="classGraph"; version="0.7-5"; sha256="19jb9jr1gfg4karymrbilh0zjrlsczhy2q03x5b0jxnh4ykhxfj8"; depends=[graph Rgraphviz]; }; - classInt = derive2 { name="classInt"; version="0.1-24"; sha256="18ng9y647jwb855pkmz555zdrznjgw4ynppaw43xm8qf8n291p7k"; depends=[class e1071]; }; - classiFunc = derive2 { name="classiFunc"; version="0.1.0"; sha256="0rgl7yzdia2wl4b03zny8fyz6mn9lr3l2lf2134kcsfvw63apc12"; depends=[BBmisc checkmate dtw fda fda_usc fdasrvf proxy]; }; + classInt = derive2 { name="classInt"; version="0.2-3"; sha256="1afiw3d5vpxky5scngj63095453xr95wrjj8kw36zsz71hrlgx11"; depends=[class e1071 spData]; }; + classiFunc = derive2 { name="classiFunc"; version="0.1.1"; sha256="1qaima3sii394741p5n06lcqkk4fiv9apb7qqnpi6srx5h02lfl5"; depends=[BBmisc checkmate dtw fda fda_usc fdasrvf proxy rucrdtw zoo]; }; classifierplots = derive2 { name="classifierplots"; version="1.3.3"; sha256="01rvn0jwliyxj7q4cmyv8an5g7fzn6y3sccp8mj6bcqjyblfcfaa"; depends=[caret data_table ggplot2 gridExtra png Rcpp ROCR]; }; classifly = derive2 { name="classifly"; version="0.4"; sha256="0mw1vcas0gr1r4yvh0j02zhk7kp5342r0bhhg776hqgqdczgh5zj"; depends=[class plyr]; }; classify = derive2 { name="classify"; version="1.3"; sha256="0134h12h6v06d7ldj9qgqjhh5f5ap98pvr0v6d4k8dqndnn0pggy"; depends=[ggplot2 lattice plyr R2jags Rcpp reshape2]; }; @@ -4969,7 +5061,7 @@ in with self; { cleanr = derive2 { name="cleanr"; version="1.1.3"; sha256="0vf2c2inb729kzmpxaznqa2zwj80j1ix9198gc36zq41ag5pd7jk"; depends=[checkmate]; }; clere = derive2 { name="clere"; version="1.1.4"; sha256="1nk3chcnaa4y1c5rr6c3bapvi106ikbk9grqcq6s6j0imny1jp4a"; depends=[lasso2 Rcpp RcppEigen]; }; clespr = derive2 { name="clespr"; version="1.1.2"; sha256="1993kd70w48a110im47vcpll0c6nfrm7m33r6l8rzgwnpsmcls8g"; depends=[AER clordr doParallel foreach magic MASS pbivnorm survival]; }; - clhs = derive2 { name="clhs"; version="0.5-7"; sha256="0n7zy8wf78lka1l0zm42zxwi24bvavfy3irfqcnz5nslqkg61il2"; depends=[ggplot2 plyr raster reshape2 scales sp]; }; + clhs = derive2 { name="clhs"; version="0.6-0"; sha256="1vw8z4kmmpd8sbx7n8fzdd7lhg10qpnnx31nnjhv4dbd6v2nqii9"; depends=[cluster ggplot2 plyr raster reshape2 scales sp]; }; cli = derive2 { name="cli"; version="1.0.0"; sha256="07as3dr7vwx02p3qgzlmxz1dlrd3x3lysrzp222ip9jcjpydp8wg"; depends=[assertthat crayon]; }; clickR = derive2 { name="clickR"; version="0.3.38"; sha256="1qlc4lz2y2ls5qx1rqiswl5qr5qqkn6l30cp5ikhzr3ffvwp3nym"; depends=[beeswarm boot brms lme4 lmerTest ReporteRs xtable]; }; clickstream = derive2 { name="clickstream"; version="1.3.0"; sha256="01bii527xy7hdph1pm6f1g4qnwa5yf3mwz01rjg1h2gc12s5vzgg"; depends=[arules ClickClust data_table ggplot2 igraph linprog MASS plyr reshape2 Rsolnp]; }; @@ -4984,18 +5076,18 @@ in with self; { clinDR = derive2 { name="clinDR"; version="1.7"; sha256="0xnrnmwg4y2vlxsmhj5pzpyiqk90xjxl91i9nn3lv90xszmdh0x2"; depends=[doParallel DoseFinding foreach ggplot2 rstan]; }; clinPK = derive2 { name="clinPK"; version="0.9.0"; sha256="1n1m8szd8mxdshwz8l3hfdxi7zrmsah46kxkv7jiffwnfhijfhsm"; depends=[curl testit]; }; clinUtiDNA = derive2 { name="clinUtiDNA"; version="1.0"; sha256="0x3hb09073gkh60fc8ia0sfk948sm6z6j8sqkz275k4m8ryrabas"; depends=[]; }; - clinfun = derive2 { name="clinfun"; version="1.0.14"; sha256="13ip144qzgx9bg9pvdgz7y4v21sjvyjjixbm8mnvn6a6k62ycgmf"; depends=[mvtnorm]; }; + clinfun = derive2 { name="clinfun"; version="1.0.15"; sha256="0cv1kdxj911scri82ms21lk9frsdp4251fawdsbqinby7k6hhmkc"; depends=[mvtnorm]; }; clinsig = derive2 { name="clinsig"; version="1.2"; sha256="1wgfl9kks57yizrf8z6x7dhmbl3a80q8nnj3a5n2hpc9yr8l9ijf"; depends=[]; }; clipr = derive2 { name="clipr"; version="0.4.0"; sha256="1bz841r3kmv16r6zxmlkvasp4nyldam00n6gh7zf8lyy9ymz38j4"; depends=[]; }; clisymbols = derive2 { name="clisymbols"; version="1.2.0"; sha256="1q7gi2zmykhzas9v8fdnbpdq7pzdcpbhim1yxvd2062l777g4j86"; depends=[]; }; clogitL1 = derive2 { name="clogitL1"; version="1.4"; sha256="0m9yrg9mzzfv5qkdf6w55xyrjdghyrf27kk7b4x2gyvwvi5b7dkm"; depends=[Rcpp]; }; clogitLasso = derive2 { name="clogitLasso"; version="1.0.1"; sha256="1mm815w31n0jvbh2rwq15ja1mzvjaz1x846xq1949aj4pb692zrl"; depends=[foreach lassoshooting]; }; clogitboost = derive2 { name="clogitboost"; version="1.1"; sha256="19wcb7229amlxn6xahxj6pf9rwfm02s7qkxz2yvyhnq95y0clxkm"; depends=[Rcpp]; }; - clordr = derive2 { name="clordr"; version="1.2.0"; sha256="0i04wx3gablbhc8g6591pgb13hhj4gr9jbswv477x3s3rw30mv6s"; depends=[doParallel foreach MASS pbivnorm rootSolve ttutils]; }; + clordr = derive2 { name="clordr"; version="1.3.0"; sha256="16cw6i91azi3xw9slzy2v8vpdkqik8k02mvgvcl9a3irbl7wgz10"; depends=[doParallel foreach MASS pbivnorm rootSolve ttutils]; }; cloudUtil = derive2 { name="cloudUtil"; version="0.1.12"; sha256="18g946j00anlk20d0fh01w0xyj1kwyy7jhlgz5a85wmp6s2gkz74"; depends=[]; }; clpAPI = derive2 { name="clpAPI"; version="1.2.7"; sha256="19bn5d7qjj7g0x17jnh2snymcn2r2skzj35hkhsgcj5r43834f3r"; depends=[]; }; clttools = derive2 { name="clttools"; version="1.3"; sha256="0va9k1b4xsb2sgpxzvid6sa8m6b8i3r4kgghclmb78nnrs480cwi"; depends=[]; }; - clubSandwich = derive2 { name="clubSandwich"; version="0.3.0"; sha256="1az4q95swknjjbaisg0whcqyyrfxs8vhax3af9bnm6n2l2czihvk"; depends=[sandwich]; }; + clubSandwich = derive2 { name="clubSandwich"; version="0.3.1"; sha256="1ga7f2s2jrj7xhrqz86bfsby8a6gsp9fqbfv0mjb2iaybi0is8d9"; depends=[sandwich]; }; clue = derive2 { name="clue"; version="0.3-54"; sha256="1fnl1wi0g8f243ra5krlpyz69pg8s8m2wwxa53hb086k7hqv74af"; depends=[cluster]; }; clues = derive2 { name="clues"; version="0.5.9"; sha256="0znlsbfmnz5wkp2cswrkjbgchdmmf7h78mv2zwx382m9n9n9hshy"; depends=[]; }; clusrank = derive2 { name="clusrank"; version="0.5-2"; sha256="168xad5dyz46yxm139q09n9vp1304yrhikxz5bcfzhm3psyv5fbf"; depends=[MASS Rcpp]; }; @@ -5004,7 +5096,7 @@ in with self; { clustMD = derive2 { name="clustMD"; version="1.2.1"; sha256="0w4s9dab2mm5x0xibyl6s101c64if945a2cmwin9psd95p76mcny"; depends=[ggplot2 MASS mclust msm mvtnorm reshape2 truncnorm viridis]; }; clustMixType = derive2 { name="clustMixType"; version="0.1-29"; sha256="01rc84ppy5mw3cdcx15xs6061lg1mwh6kxa80rnj3ax3g10x37sh"; depends=[RColorBrewer]; }; clustRcompaR = derive2 { name="clustRcompaR"; version="0.2.0"; sha256="151xq8qf1mrl35kyhdliwl2jpdkpkbl3gdnrvrybanihry2p0kqg"; depends=[dplyr ggplot2 ppls quanteda]; }; - cluster = derive2 { name="cluster"; version="2.0.6"; sha256="1z4gbz7chxxi4ly6c0yjlikwgf8aa8dlg05cn5cd6pjr21zvh97l"; depends=[]; }; + cluster = derive2 { name="cluster"; version="2.0.7-1"; sha256="1grxbifbc4nwig25dmjgkympnbzb4al0w6k1c0ibdhpk1h4l20di"; depends=[]; }; cluster_datasets = derive2 { name="cluster.datasets"; version="1.0-1"; sha256="0i68s9305q08fhynpq24qnlw03gg4hbk4184z3q3ycbi8njpr4il"; depends=[]; }; clusterCrit = derive2 { name="clusterCrit"; version="1.2.7"; sha256="13smdm8dmp4795qqn8an3k22l7xs4i4kgazyjzxdbzkg742akk7q"; depends=[]; }; clusterGeneration = derive2 { name="clusterGeneration"; version="1.3.4"; sha256="1ak8p2sxz3y9scyva7niywyadmppg3yhvn6mwjq7z7cabbcilnbw"; depends=[MASS]; }; @@ -5021,9 +5113,10 @@ in with self; { clusternomics = derive2 { name="clusternomics"; version="0.1.1"; sha256="05nkw6h2dvky07fj50myzw5xlkqyiflbn4vwqw8a1q2idv4awi7b"; depends=[magrittr MASS plyr]; }; clustertend = derive2 { name="clustertend"; version="1.4"; sha256="1aqg8cy1hk3lmzvyqh9qc1mcknrva2i0c77hyd0yff9whz80ik4j"; depends=[]; }; clusteval = derive2 { name="clusteval"; version="0.1"; sha256="1ld0bdl4fy8dsfzm3k7a37cyxc6pfc9qs31x4pxd3z5rslghz7rj"; depends=[mvtnorm Rcpp]; }; - clustrd = derive2 { name="clustrd"; version="1.2.0"; sha256="029z46ihr2c57wan03c201d9kpaiyhhfvny41fjc2mvvc50rh2z7"; depends=[ca cluster corpcor dplyr dummies fpc GGally ggplot2 ggrepel plyr]; }; + clustrd = derive2 { name="clustrd"; version="1.2.1"; sha256="05lsicz4br81fv20151j4j2bp1pfddcvywfqkagflc33z954a3z1"; depends=[ca cluster corpcor dplyr dummies fpc GGally ggplot2 ggrepel plyr]; }; + clustree = derive2 { name="clustree"; version="0.1.1"; sha256="0y6i4z9xzmw7jf6c9kl87zims3gs5akyl355jc539534vhmsi73a"; depends=[checkmate dplyr ggplot2 ggraph igraph rlang viridis]; }; clustsig = derive2 { name="clustsig"; version="1.1"; sha256="0n5nf712vsa8zb0c2lv4gjqsgva62678vjngr9idgswb73shxm8v"; depends=[]; }; - clustvarsel = derive2 { name="clustvarsel"; version="2.3.1"; sha256="04jhywv15xqb284nwi80sinxkhadd590vvjbg1immywy2md9gfgc"; depends=[BMA foreach iterators Matrix mclust]; }; + clustvarsel = derive2 { name="clustvarsel"; version="2.3.2"; sha256="11xd3pgr4i15q9rcim8y6ybi1iijv59k7f8wh0b2368kz3kz54cj"; depends=[BMA foreach iterators Matrix mclust]; }; clv = derive2 { name="clv"; version="0.3-2.1"; sha256="1qgp2qhblg6ysyrlg0ad169ahwhcyn5pvsqzdlqj700y1k7wl7mc"; depends=[class cluster]; }; cmaes = derive2 { name="cmaes"; version="1.0-11"; sha256="1hwf49d1m660jdngqak9pqasysmpc4jcgr8m04szwbyzyy6xrm5k"; depends=[]; }; cmaesr = derive2 { name="cmaesr"; version="1.0.3"; sha256="03zx2nrw24wmmjjpyh8pswasjjq0amf0g375fm2b3s111dx8fbj9"; depends=[BBmisc checkmate ggplot2 ParamHelpers smoof]; }; @@ -5033,7 +5126,7 @@ in with self; { cmprsk = derive2 { name="cmprsk"; version="2.2-7"; sha256="1imr3wpnj4g57n2x4ryahl4lk8lvq9y2r7319zv3k82mznha8bcm"; depends=[survival]; }; cmprskQR = derive2 { name="cmprskQR"; version="0.9.1"; sha256="002s6ls670sdzrxgqv9gbl646b675q1gn6dzkngnf6rgcdqwid7n"; depends=[quantreg survival]; }; cmrutils = derive2 { name="cmrutils"; version="1.3"; sha256="0zjc0bwp2p03hmnj3zjw7800pcdw8b8161y68npyp3hya0s4i9x0"; depends=[chron]; }; - cmsaf = derive2 { name="cmsaf"; version="1.9.0"; sha256="1r0cny0i3wi3xfi38l5ls6zycnp0q1a0s00qrdgi1956yrmnm5x1"; depends=[fields ncdf4 raster sp]; }; + cmsaf = derive2 { name="cmsaf"; version="1.9.1"; sha256="02l1g5l42lxg3wlpjg5qm6h8mfr1bdcpi052z8masxf6xf4l0abr"; depends=[fields ncdf4 raster sp]; }; cmvnorm = derive2 { name="cmvnorm"; version="1.0-3"; sha256="0810kzg78yaxzniq59a4swvdk9qxp37ja52f5n1zssgn0cwz1vk9"; depends=[elliptic emulator]; }; cna = derive2 { name="cna"; version="2.0.0"; sha256="0cfr4g63wwqkkz2xxz76m82p0am2kyazal6sqp7gnrc48x9lv8im"; depends=[Rcpp]; }; cnbdistr = derive2 { name="cnbdistr"; version="1.0.1"; sha256="05qi41jimslbngjgbwzfda0q25hb28ax79v9yckvrbpgjc8dk990"; depends=[hypergeo]; }; @@ -5042,8 +5135,9 @@ in with self; { coRanking = derive2 { name="coRanking"; version="0.1.3"; sha256="1ss00l0c99fi9p6gcimb31nrl5iflps6lvplnjjqwcqjkb2pjh9p"; depends=[Rtsne scatterplot3d]; }; coala = derive2 { name="coala"; version="0.5.2"; sha256="1rj9my20ba79alkhszh5lfvb9gjr6vcgiwqk2szawkpd1np3lpsr"; depends=[assertthat digest R6 Rcpp RcppArmadillo rehh scrm]; }; coalescentMCMC = derive2 { name="coalescentMCMC"; version="0.4-1"; sha256="0xxv1sw5byf84wdypg5sfazrmj75h4xpv7wh4x5cr9k0vgf80b3s"; depends=[ape coda lattice Matrix phangorn]; }; + coalitions = derive2 { name="coalitions"; version="0.6.2"; sha256="0plzrjjsbbr5mw6wqirxp1wgpl2bw2kh0gdalr8c8v2z7hc1d9r6"; depends=[checkmate dplyr forcats gtools jsonlite lubridate magrittr purrr RCurl reshape2 rlang rvest stringr tidyr xml2]; }; coarseDataTools = derive2 { name="coarseDataTools"; version="0.6-3"; sha256="0f1fkpmqq142yrqzbqv11s5q4jkq7dilmrllcns871hc6vah6ikd"; depends=[MCMCpack]; }; - cobalt = derive2 { name="cobalt"; version="3.2.1"; sha256="1ip8d2inr3369iq4bpx52fbvfwy31c0mzg1rpydj8x4m3jfh83fz"; depends=[ggplot2 ggstance]; }; + cobalt = derive2 { name="cobalt"; version="3.2.2"; sha256="1hjfhbx8pjxf87bbp41xkq03srixv5p30nw2dk1f8if7xcyzjp97"; depends=[ggplot2 ggstance]; }; cobs = derive2 { name="cobs"; version="1.3-3"; sha256="1pqvz7czcchri4x79g78hbwyagb3bqzdqb047zkbdinyz067c7kb"; depends=[quantreg SparseM]; }; cocor = derive2 { name="cocor"; version="1.1-3"; sha256="106zyrrypil8jyg0pva5zj4hgb53z81nca3d0mh2q3j55zq3wl12"; depends=[]; }; cocoreg = derive2 { name="cocoreg"; version="0.1.1"; sha256="0jrrkak964pl1vih592jgqgl6bw08j0fa1rh3j85x64bqq4m7278"; depends=[abind CCAGFA combinat e1071 ggplot2 glmnet gridExtra MASS multiway pls reshape RGCCA]; }; @@ -5052,8 +5146,9 @@ in with self; { coda = derive2 { name="coda"; version="0.19-1"; sha256="14a4a8df4ygj05h37chmdn8kzcqs07fpbflxfrq530563mrza7yl"; depends=[lattice]; }; coda_base = derive2 { name="coda.base"; version="0.1.8"; sha256="05bbmfswajmjc8l3g2clwj3hyj06y9v7camq910b881frl2xj584"; depends=[MASS Rcpp RcppArmadillo]; }; codadiags = derive2 { name="codadiags"; version="1.0"; sha256="1x243pn6qnkjyxs31h1hxy8x852r0fc952ww77g40qnrk8qw79xg"; depends=[coda]; }; - codemetar = derive2 { name="codemetar"; version="0.1.4"; sha256="0klwwf4ws2l15iq33d3jk7whp4inql6if7yai5z7493zs9c30z3x"; depends=[devtools git2r jsonld jsonlite readr stringi]; }; - codep = derive2 { name="codep"; version="0.7-1"; sha256="1icj9mijp3x93rn7xbi0aivj7r4rlgiclsa920b1x9ws8b3jrv06"; depends=[]; }; + codebook = derive2 { name="codebook"; version="0.5.8"; sha256="0zz4vw5r5dw3vfd0j71jzgdf1z1ll0sgcwqq7qrnxn1s4ya4d0v4"; depends=[dplyr DT future ggplot2 haven knitr likert mice pander psych purrr readr rlang rmarkdown skimr stringr tibble tidyr]; }; + codemetar = derive2 { name="codemetar"; version="0.1.5"; sha256="164cjcqi0pz2h3v4i8llgjjif1gyrvisg0pqz04s4glbbf2pkz80"; depends=[devtools git2r jsonld jsonlite readr stringi]; }; + codep = derive2 { name="codep"; version="0.8-1"; sha256="1ip84285kcqgniabw5da7az1p508wx961gr4hiqf8c24flyw08br"; depends=[]; }; codetools = derive2 { name="codetools"; version="0.2-15"; sha256="0h7sjmvvsi35041jp47cxhsqzgf1y8jrw6fxii7n26i8g7nrh1sf"; depends=[]; }; codingMatrices = derive2 { name="codingMatrices"; version="0.3.2"; sha256="0kldx2h3mksw4644d0ask6ij7i63rrwk0njlsvkbdjz3bf7pdv1b"; depends=[fractional Matrix]; }; codyn = derive2 { name="codyn"; version="1.1.0"; sha256="0s8ssaq59vddilz0fin9sgr8fir70c220cffbsy2l0qn34q48627"; depends=[assertthat permute]; }; @@ -5077,7 +5172,7 @@ in with self; { colmozzie = derive2 { name="colmozzie"; version="1.1.1"; sha256="0sn7dqg7rnddnmdb10c6scws6kgi1lz4lw8nc698x63z431ah1p8"; depends=[]; }; coloc = derive2 { name="coloc"; version="3.1"; sha256="1321675wz1vn7rcd2sm4c9h183nwnmp0lqww5nykjf792ijyaal8"; depends=[BMA flashClust ggplot2 reshape snpStats speedglm]; }; colorRamps = derive2 { name="colorRamps"; version="2.3"; sha256="0shbjh83x1axv4drm5r3dwgbyv70idih8z4wlzjs4hiac2qfl41z"; depends=[]; }; - colorSpec = derive2 { name="colorSpec"; version="0.6-2"; sha256="153jps1l0wv0b726b0l7bhsg7g45jdfsralg6k8nvyij4yw1dqi1"; depends=[MASS]; }; + colorSpec = derive2 { name="colorSpec"; version="0.7-3"; sha256="1gg55872ap3h15h5ris1qhjgyq4q55x702z9v0xsigz87fcr300s"; depends=[MASS minpack_lm]; }; colordistance = derive2 { name="colordistance"; version="0.8.0"; sha256="0fqj8apgfvk021cs1m79nk9kx294zxbj55jqylcrg3hadxy4plkf"; depends=[abind ape clue emdist gplots jpeg magrittr mgcv plotly png scatterplot3d spatstat]; }; coloredICA = derive2 { name="coloredICA"; version="1.0.0"; sha256="1xj4dsrwgqzm2644nk3y8nj47m036b4ylh6v60jccj3707spb32r"; depends=[MASS]; }; colorednoise = derive2 { name="colorednoise"; version="0.0.2"; sha256="0y2a86fwndcgkaxr4jmls7a9d1ipij4zi3r4nchwda0bynlw6mq4"; depends=[dplyr purrr Rcpp]; }; @@ -5105,12 +5200,12 @@ in with self; { commentr = derive2 { name="commentr"; version="1.0.4"; sha256="0anlcbk8rj0yr8i23qmr6v5ws0695nkc3mvgr6pnq1fg2d4c4brj"; depends=[stringr]; }; commonmark = derive2 { name="commonmark"; version="1.4"; sha256="1vb8r9khpvcf0q7acv8rsplfjjwcll302bg5kp596cvn6aacypl6"; depends=[]; }; commonsMath = derive2 { name="commonsMath"; version="1.1"; sha256="0v9jlk75ihh8yjhq5ybighvndp0hn1d6rqh78jkh4g6ylhbpvcw0"; depends=[]; }; - comorbidity = derive2 { name="comorbidity"; version="0.1.0"; sha256="0j2znk4w4vr1swnqp2pldhzrg28sb13ykzan15l1c1p3yg8pp35w"; depends=[checkmate]; }; + comorbidity = derive2 { name="comorbidity"; version="0.1.1"; sha256="0xb3k2ql3ikdbyx8l73wsrwi62ayapszbrygk8arw1g2n0yqz2f4"; depends=[checkmate]; }; compHclust = derive2 { name="compHclust"; version="1.0-3"; sha256="0agay7rn5mrw07imz4l547b7m9pfcg3rhz4krfxrvg1q2z2kryvj"; depends=[]; }; compactr = derive2 { name="compactr"; version="0.1"; sha256="0f2yds6inmx0lixj08ibqyd2i61l2cbg1ckgpb8dl2q7kcyyd6mx"; depends=[]; }; compare = derive2 { name="compare"; version="0.2-6"; sha256="0k9zms930b5dz9gy8414li21wy0zg9x9vp7301v5cvyfi0g7xzgw"; depends=[]; }; compareC = derive2 { name="compareC"; version="1.3.1"; sha256="0dachfr23lps2jj1y5gc958k54vskmww84gdgk4amihsdgjsnphg"; depends=[]; }; - compareDF = derive2 { name="compareDF"; version="1.2.0"; sha256="09y8bh9d9m2pf9j7qqyk1s07pp7rgbhzbkswl12vnx2cm24lp525"; depends=[dplyr htmlTable tidyr]; }; + compareDF = derive2 { name="compareDF"; version="1.3.0"; sha256="0idra4qsr73sx4rcnm3d6arfz8mrcc072jiw3lljjmwidsfdnjvr"; depends=[dplyr htmlTable tidyr]; }; compareGroups = derive2 { name="compareGroups"; version="3.3.3"; sha256="18v5as6037ndihsslk25455y553wcbrdriav1p6zbbc52lqcf0a3"; depends=[epitools gdata HardyWeinberg Hmisc knitr rmarkdown SNPassoc survival xtable]; }; compareODM = derive2 { name="compareODM"; version="1.2"; sha256="019hq8j56asjvh4x1p65785mf38xr05j3by0749gl9k9yl8645da"; depends=[XML]; }; comparer = derive2 { name="comparer"; version="0.1.1"; sha256="1nmvqzrvyxdsidkr243qdn0lj2s7j3jv1sh0mdlxm2v5063nyryr"; depends=[progress]; }; @@ -5123,7 +5218,7 @@ in with self; { complmrob = derive2 { name="complmrob"; version="0.6.1"; sha256="1dr80r1p05h3mlnjbgh6kfw86np8y2bhy9yi5qydv85w52k133n1"; depends=[boot ggplot2 robustbase scales]; }; compoisson = derive2 { name="compoisson"; version="0.3"; sha256="0v5dl7xydqi4p97nipn4hyhpq2gghmx81ygvl0vc8b65jhq89y0p"; depends=[MASS]; }; compositions = derive2 { name="compositions"; version="1.40-1"; sha256="1hn139g86bc1q3dj6kj9f21042v4x0xgrp4ni1zvx1zx8xmy3h8b"; depends=[bayesm energy robustbase tensorA]; }; - compound_Cox = derive2 { name="compound.Cox"; version="3.8"; sha256="0sskkcillpdxyibph4y35nhk67zmxylbql8igy5lq2r86wfsrp5a"; depends=[numDeriv survival]; }; + compound_Cox = derive2 { name="compound.Cox"; version="3.10"; sha256="0xk7r7dvcm5kwvimap9v4h60nxrk6hk72hm7258pm0x32ygwidcw"; depends=[numDeriv survival]; }; compute_es = derive2 { name="compute.es"; version="0.2-4"; sha256="1b5i8z66zbag0vdv98mmpwmizpm68vc3ajh0n3q94zdcmhcbx12d"; depends=[]; }; comtradr = derive2 { name="comtradr"; version="0.1.0"; sha256="0az61xsrwzr4g1s6g52vm9fivh985c6s06y3rb1c9ic0my385zhx"; depends=[httr jsonlite magrittr purrr]; }; concatenate = derive2 { name="concatenate"; version="1.0.0"; sha256="1kvsw7vwa3hn97ff7r6z21h5ajs74azwv2dk4pzgyaasnbp778hw"; depends=[]; }; @@ -5132,7 +5227,7 @@ in with self; { concor = derive2 { name="concor"; version="1.0-0.1"; sha256="0hjyvi6p16cyrmq0bq7fph1r5f3adp7zpf123wkm5bkjnc5122k0"; depends=[]; }; concordance = derive2 { name="concordance"; version="1.6"; sha256="0pb4mndrh1nimf59ajjcydlvc79nm6p7c219iymkn0b1hbrnx7lf"; depends=[]; }; concreg = derive2 { name="concreg"; version="0.6"; sha256="1ncs9cpviv5kd49hahlhi7wn2yk70msi22qv8fw91hf81ccimlp2"; depends=[survival]; }; - cond = derive2 { name="cond"; version="1.2-3"; sha256="0y7m7valk7zn40y62348czmdvfkx59il9sl6wy565lzqfiimd9ps"; depends=[statmod survival]; }; + cond = derive2 { name="cond"; version="1.2-3.1"; sha256="1j0gf28mg2j6ahs83nk662bix1lb2c9184vn8sblw433zxqaa2ny"; depends=[statmod survival]; }; condGEE = derive2 { name="condGEE"; version="0.1-4"; sha256="0mqj2pc91n8h3arpd4b9f7ndbcnai21c67is22qg22wj7vhhs87h"; depends=[numDeriv rootSolve]; }; condMVNorm = derive2 { name="condMVNorm"; version="2015.2-1"; sha256="04563jljnjhbiaiq33gn5dxjfvv05xp3lhl3w942v0smy0cdhrh4"; depends=[mvtnorm]; }; condSURV = derive2 { name="condSURV"; version="2.0.1"; sha256="0xjpypc4fzrnfjcznyc2bslkkza4fib8nx8ff2j7xh2nf84lk3f1"; depends=[doParallel doRNG foreach KernSmooth np survival]; }; @@ -5142,12 +5237,12 @@ in with self; { condmixt = derive2 { name="condmixt"; version="1.0"; sha256="05q1fj7akf6lsq9rbcqqkzlx82jvk6mlvmwx6jzk8j228fwqmg90"; depends=[evd]; }; condusco = derive2 { name="condusco"; version="0.1.0"; sha256="0zydinzlksynkz4r712rzv9qqdx8dkdz3h1ygi9cfmd6hya3580s"; depends=[assertthat bigrquery DBI jsonlite]; }; condvis = derive2 { name="condvis"; version="0.4-2"; sha256="0l515wpsmh7g4q4w29gb1gv5kafwzfhb8as0ml8vbbrh6xcgmz9q"; depends=[MASS]; }; - coneproj = derive2 { name="coneproj"; version="1.12"; sha256="1937sf7b9s2y421gf2srjjdpv2knxrr03xyq5vg5j77z73kh9s6d"; depends=[Rcpp RcppArmadillo]; }; + coneproj = derive2 { name="coneproj"; version="1.14"; sha256="0km7njsxjgrv4d8bx709nci59ngm00jg1r55702yapyjl0f2zg93"; depends=[Rcpp RcppArmadillo]; }; conf = derive2 { name="conf"; version="1.0"; sha256="0skfmk1vz8ry52l811rxnk6a8hicajza8m5ycfg7p0xb8ssyj6gi"; depends=[]; }; conf_design = derive2 { name="conf.design"; version="2.0.0"; sha256="06vdxljkjq1x56xkg041l271an1xv9wq79swxvzzk64dqqnmay51"; depends=[]; }; confSAM = derive2 { name="confSAM"; version="0.2"; sha256="1l67ndya07hh0yqfbabfhsvp3hryklx0022grpr0cb7ff88d1zam"; depends=[]; }; confidence = derive2 { name="confidence"; version="1.1-2"; sha256="0m6iz59n5jpi0ig3za3nir4d4bdsysf5g47d2nakfmaz03wk520z"; depends=[ggplot2 knitr markdown plyr xtable]; }; - config = derive2 { name="config"; version="0.2"; sha256="1p0gaqrqhcrdkp5cr3rn4i5ny8mr96b3q1fwgs0i8lk5riljkk20"; depends=[yaml]; }; + config = derive2 { name="config"; version="0.3"; sha256="0l67nfpm42ssnk0bl4jmq6bibz8hawgfgh2s14s5c8mnimv6mpjs"; depends=[yaml]; }; configr = derive2 { name="configr"; version="0.3.2.1"; sha256="184iafdsj0k8i4n877g00fsnqmdq7k4y1azwn4d18gq2l7kg3qn1"; depends=[glue ini jsonlite RcppTOML stringr yaml]; }; confinterpret = derive2 { name="confinterpret"; version="1.0.0"; sha256="0qldaqpx7kpk71zfwv465jrscwzc9w3xfv52i4h01k9aw3q6m8ja"; depends=[]; }; conformalClassification = derive2 { name="conformalClassification"; version="1.0.0"; sha256="03v6xbgipb97byarqj0d38z9yb2g54mkkw343jxmi2j058z26yw7"; depends=[doParallel foreach mlbench randomForest]; }; @@ -5158,7 +5253,7 @@ in with self; { conjoint = derive2 { name="conjoint"; version="1.39"; sha256="0f8fwf419js9c292i3ac89rlrwxs2idhwxml1qd8xd2ggwfh6w5m"; depends=[AlgDesign clusterSim]; }; conover_test = derive2 { name="conover.test"; version="1.1.5"; sha256="0f1p10klidk1xic1wd48j9rjh2fb3z6pfjx4y021lglx1w3av68k"; depends=[]; }; constants = derive2 { name="constants"; version="0.0.2"; sha256="1j9d52riwx7v1ppfdw0x517j7xh92qgskd4mj5yk9qa233brcwyy"; depends=[]; }; - constellation = derive2 { name="constellation"; version="0.1.0"; sha256="1q6kv8gg89xk80y24ma0zp8zy3cy4i93bjzax524cjbfnhpknx1k"; depends=[data_table fasttime]; }; + constellation = derive2 { name="constellation"; version="0.2.0"; sha256="1d49rnyf2z3bvx158nsmgmb0x7xcgxl9f8y98pwg5wlqck7af99q"; depends=[data_table]; }; constrainedKriging = derive2 { name="constrainedKriging"; version="0.2.4"; sha256="1a91s0b7yka37fb5pm172fmlqrhm6da370cqb9knvkg5n8vi4hys"; depends=[RandomFields rgeos sp spatialCovariance]; }; contfrac = derive2 { name="contfrac"; version="1.1-11"; sha256="0vmcazjlg0p3xaksai3k7yb9bbqkd4lhmbvxf2qymr2asqm51mdi"; depends=[]; }; conting = derive2 { name="conting"; version="1.6.1"; sha256="0vw6gwiajxzaai6ky0b89l2jg4kd4c6xxzb1cmzxlcdrhwmhz402"; depends=[BMS coda gtools mvtnorm tseries]; }; @@ -5187,14 +5282,13 @@ in with self; { corHMM = derive2 { name="corHMM"; version="1.22"; sha256="03di9250hjn5fiwn47f0pr4zprmsza4if3xpmy3j1czahc8zlqnj"; depends=[ape corpcor expm GenSA nloptr nnet numDeriv phangorn Rmpfr]; }; corTools = derive2 { name="corTools"; version="1.0"; sha256="0arvqk2xp19ap73zmdk0kb1fycb3v2mf65b4bhanvcqwr4kg4vdk"; depends=[]; }; corclass = derive2 { name="corclass"; version="0.1.1"; sha256="0ai8si992f58mrvc8hq598zbw9d4jslnc96lpzj5d89lljjv3hf5"; depends=[igraph]; }; - corcounts = derive2 { name="corcounts"; version="1.4"; sha256="0irlx62ql5rp5s7nnjdy6jh723wl4039wn10zxri8ihxwqsyyz3f"; depends=[]; }; cord = derive2 { name="cord"; version="0.1.1"; sha256="18xj6cwmx1a7p3vqx5img8qf8s75nc6pcv78v15j081pgn786ma5"; depends=[Rcpp RcppArmadillo]; }; cordillera = derive2 { name="cordillera"; version="0.8-0"; sha256="0cpysfivwmim36gcqn1i7450a33hv4pdbvil7syb0hr7vdm083dd"; depends=[dbscan yesno]; }; coreCT = derive2 { name="coreCT"; version="1.2.1"; sha256="19aq5snv5kin913rf0a1n9z0cg2l1jn2hnxbd0h05p1qrsysx52b"; depends=[igraph oro_dicom plyr raster]; }; coreNLP = derive2 { name="coreNLP"; version="0.4-2"; sha256="0rvyqj7s3lijq4rzil65060b29m393m7zmg99mykp1g1kby5bjd8"; depends=[rJava XML]; }; coreSim = derive2 { name="coreSim"; version="0.2.4"; sha256="1fhlss420rhs21l9i2ag5g3j0vnrkpqdh13ca4rwfan6h35qr3sm"; depends=[dplyr MASS]; }; coreTDT = derive2 { name="coreTDT"; version="1.0"; sha256="14rnh61gk3m6g8rq77hm9ybds0px15di2mxm3jiyfdfynx5ng58f"; depends=[]; }; - corehunter = derive2 { name="corehunter"; version="3.2.0"; sha256="12bwmhl6mmjz7xggh03933k1ax5k5dri3bp4p73y6bh1rk22p5l2"; depends=[naturalsort rJava]; }; + corehunter = derive2 { name="corehunter"; version="3.2.1"; sha256="0cxvhmi768kz3q8hydb6y9nqvc8hvkmq8nc5yfry4k94whk12wax"; depends=[naturalsort rJava]; }; corkscrew = derive2 { name="corkscrew"; version="1.1"; sha256="1nb81r4lsrajcj3xz3f7p6xznnb38yg3rnnh44rd3kabca4d8r1s"; depends=[ggplot2 gplots igraph RColorBrewer]; }; corlink = derive2 { name="corlink"; version="1.0.0"; sha256="06n9pcvbn8y9gy0mn9c0sw05424ss8smpaw3ly6a785cmj3d9b6m"; depends=[]; }; corpcor = derive2 { name="corpcor"; version="1.6.9"; sha256="1hi3i9d3841snppq1ks5pd8cliq1b4rm4dpsczmfqvwksg8snkrf"; depends=[]; }; @@ -5202,21 +5296,22 @@ in with self; { corpus = derive2 { name="corpus"; version="0.10.0"; sha256="0c984rsnbai2qrm2s10lkdfgx31m0ax46zhl74bns2bxfmagcn3l"; depends=[utf8]; }; corpustools = derive2 { name="corpustools"; version="0.3.1"; sha256="0723n7gjk4yrnbvars6c6a805cqpx21z9yn9745wbvfgq7a8c4hy"; depends=[data_table Matrix memoise plyr R6 Rcpp SnowballC stringi wordcloud]; }; corr2D = derive2 { name="corr2D"; version="0.2.0"; sha256="02z9k0j6j8jyjfgff55amkzsa5w0xbr9nqm1247qylsh8sl2rqcz"; depends=[colorspace doParallel fields foreach mmand rgl]; }; + corrDNA = derive2 { name="corrDNA"; version="1.0.1"; sha256="1mfjrzpcb63ydyj1yxa0wd3vh4z0rdwsqv09w0a0l4l7mhb5jz2k"; depends=[mvtnorm]; }; correctedAUC = derive2 { name="correctedAUC"; version="0.0.3"; sha256="0c2kq7asq5mp48p8niqb84wnw4q2q2985wxbrywrhsszm9p3xspb"; depends=[ICC mnormt]; }; - corregp = derive2 { name="corregp"; version="1.0.3"; sha256="07zsbxhvh7n4ma6lgsmg0kkmgcs5afa02k6cq57afaqvxisw18l3"; depends=[diagram ellipse gplots rgl]; }; + corregp = derive2 { name="corregp"; version="2.0.2"; sha256="1v048dibn2x3y5mi2damcsr9i5kdig5n53g5j9gf31lqkzzjmnh3"; depends=[data_table diagram ellipse gplots rgl]; }; correlbinom = derive2 { name="correlbinom"; version="0.0.1"; sha256="1ix3ccxzr7vqblbda5awsva3h95b69v7kc6adz622bbi8r36xxcq"; depends=[Rmpfr]; }; corrgram = derive2 { name="corrgram"; version="1.12"; sha256="1z0h2mkf4805w3wnhy31cf1gm9miliapxchgc4ksg3kx2799gv91"; depends=[seriation]; }; corrplot = derive2 { name="corrplot"; version="0.84"; sha256="1k03qd8db7pwg1v318xapx5mpiypiz2n07qr19c4b45diri5xkhd"; depends=[]; }; corrr = derive2 { name="corrr"; version="0.2.1"; sha256="1d04nk92fjmk4kc5zipjqjhhmb1w97kid7l2jz5a8pkwiccn5byc"; depends=[dplyr ggplot2 ggrepel lazyeval magrittr purrr seriation tibble tidyr]; }; corrsieve = derive2 { name="corrsieve"; version="1.6-8"; sha256="0ak3j9khcwv5rxbicck2sr260wpmd3xj254y7pdavx2fk0b72yxs"; depends=[]; }; corset = derive2 { name="corset"; version="0.1-4"; sha256="0ladyqvkys4cldvbhkii9jwn1k5p1ym2g5bgdlz1hq1sv30ixn2f"; depends=[]; }; - cosa = derive2 { name="cosa"; version="1.1.0"; sha256="1fdyxc3c5wknxkjmz9xcyf4yri8nh0zkim1prn3xgblwab98b5sv"; depends=[nloptr]; }; + cosa = derive2 { name="cosa"; version="1.2.0"; sha256="1g2n9l79bi6pr5m9f4c0byw2ls9nhykkaaivssxbx4m6qpqlqg54"; depends=[nloptr]; }; cosinor = derive2 { name="cosinor"; version="1.1"; sha256="02nnqg51vq48lzk667cyarnmhcf5mifnsdij7dlgqvz2k4fdq4pl"; depends=[ggplot2 shiny]; }; cosinor2 = derive2 { name="cosinor2"; version="0.1.0"; sha256="0pxkkp8dxhzqp2v3pfzigh1ka7ardf168k5p41z289xgar9p33g0"; depends=[cosinor ggplot2 Hmisc matrixStats]; }; cosmoFns = derive2 { name="cosmoFns"; version="1.0-1"; sha256="0a6xhbgxxnymlvicg99yhgny2lscxcbmvqmy17kxmahdi797dsg6"; depends=[]; }; cosso = derive2 { name="cosso"; version="2.1-1"; sha256="1wyq27qak0kz4bbzynm24r5ksvb6ddd43h2ykh6m935xck16blyb"; depends=[glmnet quadprog Rglpk]; }; - costat = derive2 { name="costat"; version="2.3"; sha256="1kqyl89lx1amap9zgrfy1bqnl93kahrksj6yms44yrxr1as2g4nk"; depends=[wavethresh]; }; - cotrend = derive2 { name="cotrend"; version="1.0"; sha256="0h0y502wqq83wlf9ab1b9rxg1wycvi3sp4lbqfpvy46vgljrjw87"; depends=[xts]; }; + costat = derive2 { name="costat"; version="2.4"; sha256="0c47bklqjgjmdglw3mi9lvygwjr5w6i1zv91ll3vpnl5dnay0692"; depends=[wavethresh]; }; + cotrend = derive2 { name="cotrend"; version="1.0.1"; sha256="14yzfq5a3wi26gn45mp2zm2yn6gic90csk9by66m08fgpzznz4dq"; depends=[xts]; }; couchDB = derive2 { name="couchDB"; version="1.4.1"; sha256="1n99amvnsjp88y091603hjsvp243c5i6dbrsvdjfmzgj5dsrv70m"; depends=[bitops httr RCurl rjson]; }; countrycode = derive2 { name="countrycode"; version="1.00.0"; sha256="1b2ijbf74bxvi01f53lbb2b9jya2rlyazvzacxpj79y1dbs600s6"; depends=[]; }; countyfloods = derive2 { name="countyfloods"; version="0.1.0"; sha256="0ld8p8dfk9khvwffbn8sad0j3an25s7cvbi6jxljgx4zc6ldh699"; depends=[dataRetrieval dplyr ggplot2 lubridate maps plyr R_utils tidyr]; }; @@ -5243,7 +5338,7 @@ in with self; { coxphMIC = derive2 { name="coxphMIC"; version="0.1.0"; sha256="0lmma5wzcczr762xqa4yamvwvyviqxk8gdrps3sydg3n14hckp6d"; depends=[numDeriv survival]; }; coxphSGD = derive2 { name="coxphSGD"; version="0.2.1"; sha256="17ga33v7a89dsygk5yypkz03x7dvjhibnwlvwfvgb2p7djd8w465"; depends=[survival]; }; coxphf = derive2 { name="coxphf"; version="1.13"; sha256="16bman8xv5xx7gg8s54sj3hc4isqxk4h3q93h4q3h3j0bdvww2yy"; depends=[survival]; }; - coxphw = derive2 { name="coxphw"; version="4.0.0"; sha256="02xiwrvc3gbwwjcz9kwy2g91jrjpawch5r4pq6l4lyvl556w296l"; depends=[survival]; }; + coxphw = derive2 { name="coxphw"; version="4.0.1"; sha256="116dp6zispa8k7y6jrn4v9ipf0jqdhj68w9qqc2qwcapawvrd0nh"; depends=[survival]; }; coxrobust = derive2 { name="coxrobust"; version="1.0"; sha256="08hp0fz5gfxgs3ipglj6qfr6v63kzxkrzg650bmzabq8dvrxd97q"; depends=[survival]; }; coxsei = derive2 { name="coxsei"; version="0.1"; sha256="1agr0gmyy1f2x6yspj04skgpi1drpbc1fcbwhhhjsz1j6c64xagy"; depends=[]; }; cp4p = derive2 { name="cp4p"; version="0.3.5"; sha256="16pkl0brm415v153ln41nyy13fsp4i0jy8349lsffkv5mvp7vklc"; depends=[limma MESS multtest qvalue]; }; @@ -5257,7 +5352,7 @@ in with self; { cpr = derive2 { name="cpr"; version="0.2.3"; sha256="1a2lza1bw74xzrs17a9gr9mnpvnnrykhwd73yqi63wp3k4sm42rb"; depends=[dplyr ggplot2 lazyeval lme4 magrittr plot3D Rcpp RcppArmadillo rgl tibble tidyr]; }; cprr = derive2 { name="cprr"; version="0.1.1"; sha256="0bnq3961bqf1y1f37x60qkwmq50vnvcpv4axq0yw5n1mrs20mllj"; depends=[]; }; cpt = derive2 { name="cpt"; version="1.0"; sha256="0cfjsni8m3sx2vh5cxiwqh50gl65nag5zp757jy75sx44rky63m8"; depends=[glmnet MASS nnet randomForest]; }; - cptcity = derive2 { name="cptcity"; version="1.0.0"; sha256="0gvgjy8m5bcihkcxzdzvxxawpk74zvd185ds28vbwvdibx8kjvph"; depends=[]; }; + cptcity = derive2 { name="cptcity"; version="1.0.3"; sha256="1axysyarmf68cmwadqwz9106zs5jj1bvrwhkg86maixj5aaqpim5"; depends=[]; }; cptec = derive2 { name="cptec"; version="0.1.0"; sha256="1sh6vs9qfxxlhlg6y2qchikjg8sh64zg3j8x5b9dpba9lhbhzzqj"; depends=[magrittr rvest xml2]; }; cqrReg = derive2 { name="cqrReg"; version="1.2"; sha256="1sn8pkbqb058lbysdf2y1s734351a91kwbanplyzv3makbbdm4ca"; depends=[quantreg Rcpp RcppArmadillo]; }; cquad = derive2 { name="cquad"; version="1.4"; sha256="1sxf30rikzr4mj1nyr12ys7gcnx5vq0rpd9djc2lkfbqlvi4mmai"; depends=[MASS plm]; }; @@ -5267,6 +5362,7 @@ in with self; { crank = derive2 { name="crank"; version="1.1"; sha256="117sgq7zm5wxmd97sfc927qq70snra6vd090mhpcsdhipw1py6zc"; depends=[]; }; cranlike = derive2 { name="cranlike"; version="1.0.1"; sha256="0lnbdkyk5mdy0qlvkx2hakqrisrxsdp5r3gif6f46pf4d9cpfj8v"; depends=[DBI debugme desc RSQLite]; }; cranlogs = derive2 { name="cranlogs"; version="2.1.0"; sha256="1w1nbifjb9l106fk97zy0w73x73bw5azq89l3c1b8r2fz8aljkkc"; depends=[httr jsonlite]; }; + cranly = derive2 { name="cranly"; version="0.1"; sha256="1q6x6v77z6y540shyqpiq0p78rp02mmhdmnq79hvlm9ykqblzrcr"; depends=[colorspace countrycode ggplot2 igraph magrittr stringr visNetwork]; }; crantastic = derive2 { name="crantastic"; version="0.1"; sha256="0y2w9g100llnyw2qwjrib17k2r2q9yws77mf6999c93r8ygzn4f5"; depends=[]; }; crawl = derive2 { name="crawl"; version="2.1.1"; sha256="0dr9z8y8rvc3wn1gjb6mh5wmszng9j1r2a9ks6p5am8ghf754sps"; depends=[dplyr gdistance mvtnorm raster Rcpp RcppArmadillo shiny sp]; }; crayon = derive2 { name="crayon"; version="1.3.4"; sha256="0s7s6vc3ww8pzanpjisym4jjvwcc5pi2qg8srx7jqlz9j3wrnvpw"; depends=[]; }; @@ -5279,7 +5375,7 @@ in with self; { crimCV = derive2 { name="crimCV"; version="0.9.6"; sha256="14ckk88i7jk8a7kl51d7qfdis44jng6zz9zd72cdp80a57dvrvzq"; depends=[]; }; crimelinkage = derive2 { name="crimelinkage"; version="0.0.4"; sha256="1zzk50kyccvnp51vzp28c9yi23hsp25arrgdn88lwfwa0m43rlar"; depends=[geosphere igraph]; }; crisp = derive2 { name="crisp"; version="1.0.0"; sha256="1gs8jnd9y9pd55w6kwv9mvmg3wd8hjiw3lwx7k242pxccsxklfxq"; depends=[MASS Matrix]; }; - crmPack = derive2 { name="crmPack"; version="0.2.6"; sha256="0jpf0626nkl3inbgb8hcgkhilrd1bkxjhm3jzscxrdghpzwvzw6h"; depends=[GenSA ggplot2 gridExtra MASS mvtnorm rjags]; }; + crmPack = derive2 { name="crmPack"; version="0.2.7"; sha256="1d0ydllcbykwip9dw3arvn6lv4h88n5nkm3ms122gfrf44f6h2c0"; depends=[GenSA ggplot2 gridExtra MASS mvtnorm rjags]; }; crminer = derive2 { name="crminer"; version="0.1.4"; sha256="1vnl01q5sw13g6qhvn61w9i40zpg9cszisgi0h8d6q6rr23iws9w"; depends=[crul hoardr jsonlite pdftools xml2]; }; crmn = derive2 { name="crmn"; version="0.0.20"; sha256="1kl1k1s2gm63f9768cg8w4j6y1gq4hws3i7hdfhj7k9015s0a25p"; depends=[Biobase pcaMethods]; }; crn = derive2 { name="crn"; version="1.1"; sha256="1fw0cwx478bs6hxidisykz444jj5g136zld1i8cv859lf44fvx2d"; depends=[chron RCurl]; }; @@ -5297,6 +5393,7 @@ in with self; { crp_CSFP = derive2 { name="crp.CSFP"; version="2.0.2"; sha256="0gazmhf5bv994x441m2xm0w18h9lw3y68qzdf6gmyqimj4wjqjgf"; depends=[MASS]; }; crplyr = derive2 { name="crplyr"; version="0.1.4"; sha256="1z50hplp6m4zgjfhmf2j8b22np6kjzqnprrdc0qx8408cb9vc9zr"; depends=[crunch dplyr lazyeval tibble]; }; crqa = derive2 { name="crqa"; version="1.0.6"; sha256="1v9fwl98jjlg2z5skqsjmmgpmmxy4g1gzvc28yflvdp50qn509v8"; depends=[fields Matrix plot3D pracma tseriesChaos]; }; + crqanlp = derive2 { name="crqanlp"; version="0.3"; sha256="1ndd5k44w232x6k564r84lyahljgcnldfwgih3iiar3il94drbdg"; depends=[corpus crqa gutenbergr RCurl tm]; }; crrSC = derive2 { name="crrSC"; version="1.1"; sha256="171cw56q2yv1vb4qd0va75i2q89jcw1126q8pcbv0235g7p2a86z"; depends=[survival]; }; crrp = derive2 { name="crrp"; version="1.0"; sha256="1fq54jr6avrli91a4z1hp5img4kghyw1yvjr5xyccsanf9i35x8r"; depends=[cmprsk Matrix survival]; }; crrstep = derive2 { name="crrstep"; version="2015-2.1"; sha256="03vd97prws9gxc7iv3jfzffvlrzhjh0g6kyvclrf87gdnwifyn1z"; depends=[cmprsk]; }; @@ -5308,11 +5405,11 @@ in with self; { crunch = derive2 { name="crunch"; version="1.20.0"; sha256="1hsya10ba6mb3xd1lvbn2d74g9glm0l98fbh130phq5wdnn8lpx9"; depends=[crayon curl httpcache httr jsonlite]; }; crunchy = derive2 { name="crunchy"; version="0.2.0"; sha256="1q9mqpkg5ljb798922fmvjjp36kyjr1rrm6jf3s2fwjrhq186y3z"; depends=[crunch shiny]; }; cruts = derive2 { name="cruts"; version="0.3"; sha256="0yn6xc2wg23nkjnsb7kii7dn897wf4ymnpmgppacrsznl8mmlmgd"; depends=[lubridate ncdf4 raster sp stringr]; }; - crypto = derive2 { name="crypto"; version="0.1.4"; sha256="1b3i0f2ll6cj5z8xmws1g6c8zgwz1ip9qwgi205ncxc0nq9xlqlc"; depends=[curl doSNOW dplyr foreach jsonlite lubridate magrittr rvest tidyr xml2]; }; + crypto = derive2 { name="crypto"; version="0.1.5"; sha256="0yqdn14mv8cbn2nmxflhyn46fqbrk3iknjg3bqxyj5k426q3zqx4"; depends=[curl doSNOW dplyr foreach jsonlite lubridate magrittr rvest tidyr xml2]; }; cryst = derive2 { name="cryst"; version="0.1.0"; sha256="04da19dy3mkngd3ma44cd8cdkb5acjy9lbhfipa9flp339j1pp57"; depends=[flux pracma]; }; csSAM = derive2 { name="csSAM"; version="1.2.4"; sha256="1ms8w4v5m9cxs9amqyljc2hr1178cz6pbhmv7iiq9yj1ijnl4r1x"; depends=[]; }; csabounds = derive2 { name="csabounds"; version="1.0.0"; sha256="15l7i15w5jk4h3148dlk8v2i4awns5vxvv6m59qcv0hzns6jhx9j"; depends=[BMisc ggplot2 pbapply progress qte]; }; - csampling = derive2 { name="csampling"; version="1.2-2"; sha256="0gj85cgc3lgv7isqbkng4wgzg8gqcic89768q2p23k4jhhn6xm2w"; depends=[marg statmod survival]; }; + csampling = derive2 { name="csampling"; version="1.2-2.1"; sha256="0kqx7j96yafsqi9cz551fqpwkbcabxl8zpwa2jms862z41xbgsv3"; depends=[marg statmod survival]; }; cshapes = derive2 { name="cshapes"; version="0.6"; sha256="0mp6grkibmqk4k1yi4w2sglpp9ari5cfw4iip49a0z58qa98npw7"; depends=[maptools plyr sp]; }; csn = derive2 { name="csn"; version="1.1.3"; sha256="102w1qh9hgz4j9lh5hnbw1z3b7p034si73q4pkk564a2mhzlksw4"; depends=[mvtnorm]; }; csp = derive2 { name="csp"; version="0.1.0"; sha256="1pc5mcn9difpp4cmfb0a8pqhbpkfakxjkbr7bpqmfiwcfk8rzr1h"; depends=[]; }; @@ -5335,14 +5432,14 @@ in with self; { ctv = derive2 { name="ctv"; version="0.8-4"; sha256="0yl20b1j8c11b1g0q6qv0wsaivxpikwslhky4lckbm3rwbn5vbb2"; depends=[]; }; cubature = derive2 { name="cubature"; version="1.3-11"; sha256="06f6gsvbb732p80r6hxvzh4ik546icxfvx21dyh65ypmw3kgm64k"; depends=[Rcpp]; }; cubfits = derive2 { name="cubfits"; version="0.1-3"; sha256="0i2iybm9vpyqnahzka66yms1namdd36bz1i1yjy74qsc1h995rga"; depends=[coda foreach]; }; - cubing = derive2 { name="cubing"; version="1.0-2"; sha256="00fch9vgxcaasxgrz79x21wb54yspnw5ysdjcdfym4qjknh9m3b6"; depends=[rgl]; }; + cubing = derive2 { name="cubing"; version="1.0-4"; sha256="11aln47l8ni33k3mmadccnphsv1rad4n5llg9ff5lpjyk9gn3am8"; depends=[rgl]; }; cudaBayesreg = derive2 { name="cudaBayesreg"; version="0.3-16"; sha256="1xsamdsg4cq7l5r7czkg70j5gypf1dak3h353xfbz3rq0r0dni19"; depends=[cudaBayesregData oro_nifti]; }; cudaBayesregData = derive2 { name="cudaBayesregData"; version="0.3-11"; sha256="1cls9xqgps7icjpi1mllkrksdxwc1jfhxgffvrcrqx2l16vw6qfx"; depends=[]; }; cudia = derive2 { name="cudia"; version="0.1"; sha256="1ms3bc8sp6l3bm75j418mmb707sy3gyvxznhfias3nd4sw7i074x"; depends=[MCMCpack mvtnorm]; }; cumSeg = derive2 { name="cumSeg"; version="1.1"; sha256="01hn3j1i7bi2r9vsqwbgy1f1alcisxyf4316xx57bg82lb34d0s5"; depends=[lars]; }; cumplyr = derive2 { name="cumplyr"; version="0.1-1"; sha256="07sz1wryl3kxbk67qyvnkrkdrp4virlsaia0y6rf9bqdw7rc6vi2"; depends=[]; }; cumstats = derive2 { name="cumstats"; version="1.0"; sha256="119w751z9dg6pjyk389pbl8ab8pirf9sqndi4nxi89ix2bby4xz8"; depends=[]; }; - curl = derive2 { name="curl"; version="3.1"; sha256="15fbjya2xrf2k9hhvg3frisrram4yk5wlfz67zj1z8ahpsb2a3r7"; depends=[]; }; + curl = derive2 { name="curl"; version="3.2"; sha256="15hmy71310hnf9yqvz0icx4cq939gv6iqaifzlfdh2ia8akawdhn"; depends=[]; }; currentSurvival = derive2 { name="currentSurvival"; version="1.0"; sha256="0bqpfwf4v4pb024a98qwg81m6zd7ljg1ps42ifhxpqx7b9gdyi6c"; depends=[cmprsk survival]; }; curry = derive2 { name="curry"; version="0.1.1"; sha256="1ps9hvbnb02m0b8hlw4admwbziyjvswj08ldi2dk3ymnrpawcc29"; depends=[]; }; curstatCI = derive2 { name="curstatCI"; version="0.1.1"; sha256="0igqdv0fzzji10gz3j3ir8qxpy7vdjfl137067rc28qzbrl2sy2c"; depends=[Rcpp]; }; @@ -5352,10 +5449,13 @@ in with self; { cusp = derive2 { name="cusp"; version="2.3.3"; sha256="130m0is48bp11p5fpg17lwqwlavsa8fzfxjs0z62vl6lm006aahw"; depends=[]; }; customizedTraining = derive2 { name="customizedTraining"; version="1.1"; sha256="0rlfsnhmmcwx7iyjavj03v4kdfzxcqjggi8qpgmi6lkli3n0s6pg"; depends=[FNN glmnet]; }; cutoffR = derive2 { name="cutoffR"; version="1.0"; sha256="1801jylmpp4msyf07rhg4153kky1zvi4v0kkjb9d51dc7zkhh531"; depends=[ggplot2 reshape2]; }; + cutpointr = derive2 { name="cutpointr"; version="0.7.3"; sha256="09pcja8kp3sdsz2vp32s5vl7m5cz14rlbp9aa00y4qd21nyckyj9"; depends=[dplyr foreach ggplot2 gridExtra purrr Rcpp rlang tibble tidyr]; }; cuttlefish_model = derive2 { name="cuttlefish.model"; version="1.0"; sha256="1rmkfyfd1323g2ymd5gi1aksp160cwy5ha5cjqh5r6fzd8hhqjxs"; depends=[]; }; cvAUC = derive2 { name="cvAUC"; version="1.1.0"; sha256="13bk97l5nn97h85iz93zxazhr63n21nwyrpnl856as9qp59yvn64"; depends=[data_table ROCR]; }; cvTools = derive2 { name="cvTools"; version="0.3.2"; sha256="0b7xb6dmhqbvz32zyfbdvm9zjyc59snic6wp1r21ina48hchn3sj"; depends=[lattice robustbase]; }; - cvequality = derive2 { name="cvequality"; version="0.1.1"; sha256="0pqvaz8vfwd0x433rrdwdwjp3hgsw1nb5nzsxci5zibjksk14kgp"; depends=[]; }; + cvar = derive2 { name="cvar"; version="0.1-1"; sha256="0aqv42wbhdql1v0mxspr5ms2mwkk6yw0snzzjg5qg682m5f13ghn"; depends=[gbutils Rdpack]; }; + cvcrand = derive2 { name="cvcrand"; version="0.0.2"; sha256="1gclzn6qqjylxg3v263x5cfg1wjkqviqb3fzzb7w0ckpld2his0v"; depends=[tableone]; }; + cvequality = derive2 { name="cvequality"; version="0.1.3"; sha256="19mpf2vjj2hfgdr3mx5y1i0ldb0byvv2ii7lyanhc6c2a3mirs38"; depends=[]; }; cvq2 = derive2 { name="cvq2"; version="1.2.0"; sha256="19k95xg2y3wd4mx3wvbrc1invybd446g13vsp3dv05nw2kx4f6w8"; depends=[]; }; cvxbiclustr = derive2 { name="cvxbiclustr"; version="0.0.1"; sha256="00k75zy8v6qd5fg0h258i5z8ljjkfgkxz45cspysl1ap89d5n7df"; depends=[igraph Matrix]; }; cvxclustr = derive2 { name="cvxclustr"; version="1.1.1"; sha256="0idmx4wgz4d0b1xzmlq5bsk2f2q38lpf9c117hg97xsfndzn7vqj"; depends=[igraph Matrix]; }; @@ -5375,7 +5475,7 @@ in with self; { d3Tree = derive2 { name="d3Tree"; version="0.2.0"; sha256="0xjr36hdd00dy8s8z1a1s44dn2wg0nm6yqc1rri2l0dqrbh4nrbn"; depends=[dplyr htmlwidgets magrittr plyr stringr]; }; d3heatmap = derive2 { name="d3heatmap"; version="0.6.1.2"; sha256="1ici8j0wzzklhmw94qlxm292qs562vc32wq8mnjsas2n1p35vkmk"; depends=[base64enc dendextend htmlwidgets png scales]; }; d3plus = derive2 { name="d3plus"; version="0.1.0"; sha256="0kadz83pals03n0v3zqhmhf6visigk52yn58xckhb57fid4xzj5w"; depends=[htmlwidgets magrittr]; }; - d3r = derive2 { name="d3r"; version="0.7.1"; sha256="1v25jh4gfp921q5cgjzxyar1sx2q842slkkshq1lnb31zkzidygq"; depends=[dplyr htmltools tidyr]; }; + d3r = derive2 { name="d3r"; version="0.8.0"; sha256="1zx351g4kl45dlva8q4ah3wdjvxjzssjpa280ljypfml3iqkzx70"; depends=[dplyr htmltools tidyr]; }; dChipIO = derive2 { name="dChipIO"; version="0.1.5"; sha256="1xrafw5h071d8rfqaic3gifc80jpiddjz5x6l2cr8kgjvph60gqh"; depends=[]; }; dCovTS = derive2 { name="dCovTS"; version="1.1"; sha256="1pd50nfmfcqpi8zj20ngl0hc23qa4rabqhc1xci3ivyhs0valhsl"; depends=[doParallel energy foreach]; }; dGAselID = derive2 { name="dGAselID"; version="1.2"; sha256="0da7fi872i3ycb3j5v4isr4x2z39a68w4mdq859zslmqhiqd43b6"; depends=[ALL Biobase genefilter MLInterfaces]; }; @@ -5400,7 +5500,7 @@ in with self; { dat = derive2 { name="dat"; version="0.4.0"; sha256="1nw16hsw9b4hpcl5rqrlw6yk9y2h1pd0ra1c7iz82sknkyd5afi6"; depends=[aoos data_table dplyr Formula magrittr progress tibble]; }; data_table = derive2 { name="data.table"; version="1.10.4-3"; sha256="12caklgr19vy9wprdks6zh825vr1iw1cajgwcnbpyvmijqdlz2xs"; depends=[]; }; data_tree = derive2 { name="data.tree"; version="0.7.5"; sha256="07mavj30pqgk831dw5nj0z0jri6fq8wx9a6nyx0q873if7q3j52w"; depends=[DiagrammeR R6 stringr]; }; - data_world = derive2 { name="data.world"; version="1.2.0"; sha256="0bw1yi5qwnm3fx8d7j2q9r9fyzf4c10z3m4yxs1srp3z77i8v6d9"; depends=[dwapi httr ini miniUI shiny stringi]; }; + data_world = derive2 { name="data.world"; version="1.2.2"; sha256="1d9hh4965f2d0lwh2xxhnxzc948ailkjzdax3d3z9l8lakqfrx0h"; depends=[dwapi httr ini miniUI shiny stringi]; }; data360r = derive2 { name="data360r"; version="1.0.1"; sha256="1g245zg70ch81zjmd1ng16lks38qr0a6m63y582w558mza7v148g"; depends=[curl data_table jsonlite reshape2]; }; dataCompareR = derive2 { name="dataCompareR"; version="0.1.1"; sha256="06nba2yir2yz1189bsag9yavdf9hfmpswxdy92dlnbz9d27jjsic"; depends=[dplyr knitr markdown stringi]; }; dataMaid = derive2 { name="dataMaid"; version="1.1.0"; sha256="1scpyc0c4rcb0hk1dnzaqprb59n9vrngkg2h1h1knl5klxabkj2y"; depends=[ggplot2 gridExtra haven htmltools magrittr pander robustbase whoami]; }; @@ -5415,7 +5515,7 @@ in with self; { dataframes2xls = derive2 { name="dataframes2xls"; version="0.4.7"; sha256="10krlv0l5w021z0qd7rj93pzfjjmcjlda4xz4vq470bxbjmn1bss"; depends=[]; }; datafsm = derive2 { name="datafsm"; version="0.2.1"; sha256="16l6ssprsvnpzxlfnqj7r061x700704s5gdci5x9ixdjmglakmdd"; depends=[caret GA Rcpp]; }; datamap = derive2 { name="datamap"; version="0.1-1"; sha256="0qm4zb9ldg4wz1a7paj5ilr1dhyagq81rk9l2v43hmkv52sssgkv"; depends=[DBI]; }; - datamaps = derive2 { name="datamaps"; version="0.0.1"; sha256="1y44adffpwwfv905qmwx1kkmakh6vfyvrblgjjaqqssp6v597wrq"; depends=[htmlwidgets magrittr]; }; + datamaps = derive2 { name="datamaps"; version="0.0.2"; sha256="01pjv5f764vw8krq9mrwnih8a8akkqa5779igh4ddh0av32gswd8"; depends=[htmlwidgets magrittr]; }; datamart = derive2 { name="datamart"; version="0.5.2"; sha256="0c0l157fzkcp30ch4ymaalcx18zhz6sa5srr50w9izhbx3pmldxp"; depends=[base64 gsubfn markdown RCurl RJSONIO XML]; }; dataonderivatives = derive2 { name="dataonderivatives"; version="0.3.1"; sha256="0q1zd1l7l0hmbs1bx469d706rmprjbz2f2dgcnfp9wxfgqpfxkz1"; depends=[assertthat httr lubridate readr tibble]; }; dataone = derive2 { name="dataone"; version="2.1.0"; sha256="0vpa4gb30dvxax4sxbnbn8gblnzdfcf2k0v5js3gqwjb95ah4w4y"; depends=[base64enc datapack hash httr jsonlite parsedate plyr stringr uuid XML]; }; @@ -5426,26 +5526,28 @@ in with self; { dataseries = derive2 { name="dataseries"; version="0.2.0"; sha256="11wc2p5m8qbdmkpbd21lpwl28a1dpab88c3gqyrhsn0298lpnip4"; depends=[]; }; datasets_load = derive2 { name="datasets.load"; version="0.1.0"; sha256="029rxg0h17nszkxgq5kjd0njymb8pgdsabmz5slshzd2ijjh82jz"; depends=[DT miniUI shiny]; }; datastepr = derive2 { name="datastepr"; version="0.0.2"; sha256="039yggdj8jdici7hwmkjwgix45lvwjl7rw5h2rfzsm9xaq6vw1z2"; depends=[dplyr lazyeval magrittr R6 tibble]; }; - datastructures = derive2 { name="datastructures"; version="0.2.1"; sha256="05m9zrqil1qmjax3r86wn6k1fq4v7x3hwq2hs9n36lyhj06r031y"; depends=[BH Rcpp]; }; + datastructures = derive2 { name="datastructures"; version="0.2.5"; sha256="0vg7s6l0d9x768j0b6nw93914raybkym0f3l7f0jpwbj265isfs1"; depends=[BH purrr Rcpp]; }; datasus = derive2 { name="datasus"; version="0.4.0"; sha256="18mvgdzk2f2plzgz9w47w4zxbdz24rymxvjv08j0cm242pcl11l7"; depends=[dplyr httr magrittr RCurl readr rvest stringi stringr xml2]; }; datautils = derive2 { name="datautils"; version="0.1.5"; sha256="1yy25a84zmfh54jvxwa7mv4j296rmjgd40m4p81mrsswlqvncmfn"; depends=[deldir gplots gtools]; }; dataverse = derive2 { name="dataverse"; version="0.2.0"; sha256="0lyga8rdsir2yr1n9nr10iiaf6a7dxp1nb04bx8mq8ljrvpkgr8n"; depends=[httr jsonlite xml2]; }; dataview = derive2 { name="dataview"; version="2.1.1"; sha256="1nn33h5c1h4a3zm1xm7sdz4s6sy0f3r53jhm7bv6qk7aiylwqf6v"; depends=[data_table xtermStyle]; }; date = derive2 { name="date"; version="1.2-38"; sha256="1ziy17kz02j7lals14s43rs9lmxxfn2ppfi55q4b3m4gfj9pr4jc"; depends=[]; }; - datetime = derive2 { name="datetime"; version="0.1.2"; sha256="0qbd1makidkbpr26wkxchnb8rpwzm4l42j4vipwwmfwv3gpslmjx"; depends=[]; }; + datetime = derive2 { name="datetime"; version="0.1.3"; sha256="1grl6ygfwmi8a307fibdlkqv4mnzixjfzmi1vl0svx1w4d527bv9"; depends=[]; }; datetimeutils = derive2 { name="datetimeutils"; version="0.2-12"; sha256="023jxsih2zlfv9yldn68cbrdl7jw5rpbz4cc9y0z530bb1fs8d1k"; depends=[]; }; datoramar = derive2 { name="datoramar"; version="0.1.0"; sha256="0zq6vhq6dmsyagmqrmb85z6fy9qhwra3s3iasr3jgc4ryr009pml"; depends=[httr jsonlite tibble]; }; + datr = derive2 { name="datr"; version="0.1.0"; sha256="0sqwhn6zdaq8i45ry207mpbda1djjaxp9mcn13hi5wkry6z0bmlr"; depends=[devtools]; }; dave = derive2 { name="dave"; version="2.0"; sha256="1rraphpp34czyjj15xzvj1ihlnqzcppqls9n2g85n49zv0n1ngn8"; depends=[cluster labdsv nnet tree vegan]; }; dawai = derive2 { name="dawai"; version="1.2.3"; sha256="18dg81d1018f8ibm4p43ih6fjgm6r0qs5phqbp7pqrixjj3ydk58"; depends=[boot ibdreg mvtnorm]; }; + daymetr = derive2 { name="daymetr"; version="1.3.1"; sha256="034yhyq58ihb9faqsqqwbhhrp64kxim0ix6nwiyx7cxahikvdsiy"; depends=[httr ncdf4 raster rgdal rgeos sp]; }; dbConnect = derive2 { name="dbConnect"; version="1.0"; sha256="1vab5l4cah5vgq6a1b9ywx7abwlsk0kjx8vb3ha03hylcx546w42"; depends=[gWidgets RMySQL]; }; dbEmpLikeGOF = derive2 { name="dbEmpLikeGOF"; version="1.2.4"; sha256="0vhpcxy702cp3lvlif2fzmvccys8iy7bv1fbg6ki2l8bvn2f7c5p"; depends=[]; }; dbEmpLikeNorm = derive2 { name="dbEmpLikeNorm"; version="1.0.0"; sha256="0h5r2mqgallxf9hin64771qqn9ilgk1kpsjsdj2dqfl3m8zg967l"; depends=[dbEmpLikeGOF]; }; - dbarts = derive2 { name="dbarts"; version="0.9-1"; sha256="15z70wzkp88r5djq9y6ckj2yqkasbbz0zfx7mmc6w8an7j8flhdg"; depends=[]; }; + dbarts = derive2 { name="dbarts"; version="0.9-3"; sha256="0mxpvfaily4712k8q5wiby7rhvqm28qqi1v4b3csnlm9f0260gzi"; depends=[]; }; dbfaker = derive2 { name="dbfaker"; version="0.1.0"; sha256="00n2z4q5drpg26pw826i16rg07m7w66a0r466q2lrl14hxs4rcaq"; depends=[assertive DBI dplyr foreach parsedate RPostgreSQL tidyr]; }; dbhydroR = derive2 { name="dbhydroR"; version="0.2-4"; sha256="189yzc7nchl31203jadf6qs3w1d3s01ifn9y6403c11qm4y63fpf"; depends=[httr reshape2 XML]; }; dblcens = derive2 { name="dblcens"; version="1.1.7"; sha256="02639vyaqg7jpxih8cljc8snijb78bb084f4j3ns6byd09xbdwcw"; depends=[]; }; dblr = derive2 { name="dblr"; version="0.1.0"; sha256="0wzmhmp706mw0pkh81nsb7qzclwyhm6f2mjvpvz043ng5xrxwvvw"; depends=[CatEncoders data_table Metrics xgboost]; }; - dbmss = derive2 { name="dbmss"; version="2.5-1"; sha256="1giwbzjgz2qiry9mmqyby1jxpdsxaifv1p227i9jyq9d46gs9qiy"; depends=[cubature Rcpp RcppParallel spatstat spatstat_utils]; }; + dbmss = derive2 { name="dbmss"; version="2.6-3"; sha256="0b3vbsb01rz46mspfk8v9dgwqkxnjkv5d6152zg1zsvyv0z9wvqd"; depends=[cubature Rcpp RcppParallel spatstat spatstat_utils]; }; dbplot = derive2 { name="dbplot"; version="0.2.1"; sha256="1ksjxvq8y5n5vwnpvxwbdmcywnld9fnkmq63ckcv7nbgbiyi5wgw"; depends=[dplyr ggplot2 rlang]; }; dbplyr = derive2 { name="dbplyr"; version="1.2.1"; sha256="1nwrls9c3kc9q7405jp6b9sh23642sz13yw55iikgw134shffj5k"; depends=[assertthat DBI dplyr glue purrr R6 rlang tibble tidyselect]; }; dbscan = derive2 { name="dbscan"; version="1.1-1"; sha256="09rh3x4g3xv5f1p8wbc847z8khj7v2r5vz9yf1lfdiy23q2w3xp1"; depends=[Rcpp]; }; @@ -5458,13 +5560,13 @@ in with self; { dcmle = derive2 { name="dcmle"; version="0.3-1"; sha256="1d6zk9413h30wcw8q1gnjzk67vshmjcpnh8zjxrsh1h69i1z6rpy"; depends=[coda dclone lattice]; }; dcmodify = derive2 { name="dcmodify"; version="0.1.1"; sha256="1a909v6jhihwwmq7lzv2xazrkfa1553kbrjsbjfsh1qrqdiam3sr"; depends=[settings validate yaml]; }; dcmr = derive2 { name="dcmr"; version="1.0"; sha256="1a89wr1n8sykjbwa316zlmcffaysksrqnbd89anxqj8sgw9xv6jq"; depends=[ggplot2 KFAS plyr reshape2 tableplot]; }; + dcurver = derive2 { name="dcurver"; version="0.9.0"; sha256="16qb5lvwxzkffv1gf0gp8dsvaxipwhgnl3y6qqg0h0qx8gynf217"; depends=[Rcpp RcppArmadillo]; }; dcv = derive2 { name="dcv"; version="0.1.1"; sha256="12c716x8dnxnqksibpmyysqp2axggvy9dpd55s9bhnsvqvi6dshj"; depends=[lmtest]; }; - ddR = derive2 { name="ddR"; version="0.1.2"; sha256="00mb9xq69dvl50v5429nw0mjazgjwh2sp98w8n2cwhhamjgp42k9"; depends=[Rcpp]; }; - ddalpha = derive2 { name="ddalpha"; version="1.3.1.1"; sha256="13w8ir5rd80rka4mq343zd4wn93vfw870lzfqrd3cxgwb1bwcw7y"; depends=[BH class MASS Rcpp robustbase sfsmisc]; }; + ddalpha = derive2 { name="ddalpha"; version="1.3.2"; sha256="1i2zcz20zy9xd42kdz09njbkq07mj2pp6f07z6dnwi5hrmvhbh9r"; depends=[BH class geometry MASS Rcpp robustbase sfsmisc]; }; ddeploy = derive2 { name="ddeploy"; version="1.0.4"; sha256="06s4mn93sl33gldda9qab8l3nqig8zq0fh1s2f98igsysmn31br5"; depends=[httr jsonlite]; }; ddpcr = derive2 { name="ddpcr"; version="1.8"; sha256="11bk4mhiqn73sjji2wz47v7jqqg9kq3amci9m6a88h4fvvgmpcz4"; depends=[dplyr DT ggplot2 lazyeval magrittr mixtools plyr readr shiny shinyjs]; }; ddst = derive2 { name="ddst"; version="1.4"; sha256="1y0immm337adkd2bjx8c5pf02w9wysv3gj26f4qf0jiba0f2wk8n"; depends=[evd orthopolynom]; }; - deBInfer = derive2 { name="deBInfer"; version="0.4.1"; sha256="05khyjpyxwrm9q8jsysffgsjpjbw76w9rrl7i8ia0yc9lv0bzjc9"; depends=[coda deSolve MASS mvtnorm PBSddesolve plyr RColorBrewer truncdist]; }; + deBInfer = derive2 { name="deBInfer"; version="0.4.2"; sha256="108vijk71sgsj14hwfv78r4lnn68cybvnpr92zvrvl0d82b7qxfd"; depends=[coda deSolve MASS mvtnorm PBSddesolve plyr RColorBrewer truncdist]; }; deGradInfer = derive2 { name="deGradInfer"; version="1.0.0"; sha256="1wl1pw1rwins4gr47a8ii4diw6wd6cx8ib4l5bhri5f3crbw7l86"; depends=[deSolve gdata gptk]; }; deSolve = derive2 { name="deSolve"; version="1.20"; sha256="18nx3maww979a8p8ly4hv63y65mnjx8vbj2fpipd6rhcbf1lbsan"; depends=[]; }; deTestSet = derive2 { name="deTestSet"; version="1.1.5"; sha256="07wbgniwkpp0yry6wvchvszr8isxs1i9k6km951r5c009w1iviwk"; depends=[deSolve]; }; @@ -5473,6 +5575,7 @@ in with self; { deamer = derive2 { name="deamer"; version="1.0"; sha256="1xbxr78n6s1yhf192ab4syi1naqlwl9z4cxzchrkw80q7bxqfiz8"; depends=[]; }; debug = derive2 { name="debug"; version="1.3.1"; sha256="0mpwi6sippxyr1l8xf48xqv6qw6pmfkxs13k1gjyd7bkzlbchgqd"; depends=[mvbutils]; }; debugme = derive2 { name="debugme"; version="1.1.0"; sha256="1c9sg55zvf10h8198jdnpamm6f66lzw3c3jnmdp9ls6na0j0xbjd"; depends=[crayon]; }; + decido = derive2 { name="decido"; version="0.1.0"; sha256="1d53qcpy165f9izaj0x5x5d5h7jvihhk6mghs9g52dfxrvpndfgn"; depends=[oz Rcpp]; }; decision = derive2 { name="decision"; version="0.1.0"; sha256="13d0yyg5zp7n3r92l0l1dsffxfph6vacrlzga9rz41l5pja72z6g"; depends=[]; }; decisionSupport = derive2 { name="decisionSupport"; version="1.103.6"; sha256="1lfv1a9pcf1f7la1vxpwvw8abk4jbq7cmalp374l0xasfyin2mr5"; depends=[chillR msm mvtnorm nleqslv rriskDistributions]; }; decode = derive2 { name="decode"; version="1.2"; sha256="1qp0765gl3pgfdzjwj7icf3zminxxmrlw6gx3vj51y6c2y5ws4as"; depends=[]; }; @@ -5487,14 +5590,15 @@ in with self; { deepboost = derive2 { name="deepboost"; version="0.1.6"; sha256="1nf9gjk9gjl2dz7cr3vh5lg8nxkbqwr82a132nw853axbdgbs9ga"; depends=[Rcpp]; }; deepnet = derive2 { name="deepnet"; version="0.2"; sha256="09crwiq12wzwvdp3yxhc40vdh7hsnm4smqamnk4i6hli11ca90h4"; depends=[]; }; default = derive2 { name="default"; version="1.0.0"; sha256="0hzxgp9la9kll5cw3m4gd02rii571xsn1v53kz407k7k6rfg5mda"; depends=[]; }; + define = derive2 { name="define"; version="0.2.7"; sha256="0m5nk6shfak43zw68vzc9ncl0a3rrrkhc5ckhb5yhjllj6g5yigf"; depends=[encode Hmisc latexpdf SASxport spec]; }; deformula = derive2 { name="deformula"; version="0.1.1"; sha256="0h85yzl8kvjwrn1mkzyblvknf7gg8kx8y85qnvkwfbr9ik42ngn1"; depends=[]; }; degenes = derive2 { name="degenes"; version="1.1"; sha256="1xxn5j06qizywimrp1pl8z3yjdy1a167b9jnm77gmv87rp6j240c"; depends=[]; }; - degreenet = derive2 { name="degreenet"; version="1.3-1"; sha256="0k0a1c1bv7zclrarfzf0d6avbd8zjnc3zd155jzmhi8dacr6r73w"; depends=[igraph network]; }; + degreenet = derive2 { name="degreenet"; version="1.3-3"; sha256="07mkj2sdp09624mmb1x3djjypnrzn43qn2j4m93blli51j6zchm3"; depends=[igraph network]; }; deisotoper = derive2 { name="deisotoper"; version="0.0.3"; sha256="1263cgwzgl3dnv1y9qhzjl4b7r69h59x38ggb7c8zn7g6qbdc0kc"; depends=[rJava]; }; dejaVu = derive2 { name="dejaVu"; version="0.2.0"; sha256="1cnbgssdnvl092vz0j2n4bamvysrr0n9wy6ycz2mkm5wvf4r296i"; depends=[MASS]; }; - deldir = derive2 { name="deldir"; version="0.1-14"; sha256="12cjr4r50rdrh2l0105cvd42rqwzsmmiqcax3sbqk1ggh2lnblw9"; depends=[]; }; + deldir = derive2 { name="deldir"; version="0.1-15"; sha256="0407wfnjcfg7ca6ani96bbg5ksx8jkyijaprv7n4g7w21311242p"; depends=[]; }; delt = derive2 { name="delt"; version="0.8.2"; sha256="06g03wy9r2qvly0lnv5fv4k366mhlk56qkvak0xaxy99p1i34kmv"; depends=[denpro]; }; - deltaPlotR = derive2 { name="deltaPlotR"; version="1.5"; sha256="0hbaibl4b50pg9ypyhz4700w6kir4jiyyl0230a8hjmb92aqn303"; depends=[MASS]; }; + deltaPlotR = derive2 { name="deltaPlotR"; version="1.6"; sha256="15vjg3viyfrxvvh34p8i7j8p0vpg5628g8198adhi0i2ri3ygz9a"; depends=[MASS]; }; deltar = derive2 { name="deltar"; version="1.0.0"; sha256="1ki89ysz4qlq5z094ybg3aqfcb6g633ccvpj1cg6nri9z5qjwpm1"; depends=[Bchron]; }; demi = derive2 { name="demi"; version="1.1.2"; sha256="04dq4db9ibvv91nm0gz8dfbgv1gpmalf9hv6i78dwhh1xzjg1mig"; depends=[affxparser affy devtools oligo plyr R_utils]; }; deming = derive2 { name="deming"; version="1.0-1"; sha256="00v59qb6qwbwsvcwi59d0c0g3czfz1190ccj4dx6yarizr4g6cy8"; depends=[boot]; }; @@ -5502,7 +5606,7 @@ in with self; { demogR = derive2 { name="demogR"; version="0.5.0"; sha256="1y7pkf1m8fqjsvs0szyaqga2y7p3dvj0r85nz8nzqbmy4zrrv4w8"; depends=[]; }; demography = derive2 { name="demography"; version="1.20"; sha256="097k0chs8shm1r9ny6jdx2kp2shyxsivjw1n1rhb3bs0m0l3vm9r"; depends=[cobs forecast ftsa mgcv rainbow RCurl strucchange]; }; dendextend = derive2 { name="dendextend"; version="1.7.0"; sha256="1krvqadnnh53xx5ql7bwzxaif6a317jzbs1m00gnc6jnj03rfl5d"; depends=[fpc ggplot2 magrittr viridis whisker]; }; - dendroTools = derive2 { name="dendroTools"; version="0.0.6"; sha256="0mqzlysp0kihs9ymz8y3agvjl6ihn996cmpw331c4jb5n7vhjx0r"; depends=[brnn caret dplyr ggplot2 gridExtra MLmetrics oce randomForest reshape reshape2 RWeka scales]; }; + dendroTools = derive2 { name="dendroTools"; version="0.0.7"; sha256="1wij1jwhbn0zs15zh2raa7xa1zfklchlyihv6baf7gkk5cmy87zg"; depends=[brnn dplyr ggplot2 gridExtra knitr magrittr MLmetrics oce plotly reshape reshape2 RWeka scales]; }; dendroextras = derive2 { name="dendroextras"; version="0.2.3"; sha256="0hb7crbgsnbcwvbk05iz5ik45n7zgysmwjj6xc46131yd8l0i1qx"; depends=[]; }; dendrometeR = derive2 { name="dendrometeR"; version="1.0.0"; sha256="1par27ipgbfbrmdlwvkf82i5dgnfrcawmavakrf8lplin2hhb7gs"; depends=[forecast pspline zoo]; }; dendsort = derive2 { name="dendsort"; version="0.3.3"; sha256="1m4qh79ppfvipmbi8m8vwq0hqmwwipbg5izihz5j6x8a4g5i6iym"; depends=[]; }; @@ -5510,10 +5614,10 @@ in with self; { denoiseR = derive2 { name="denoiseR"; version="1.0"; sha256="094nknr3hyx4kv18vnpdzrcpmfb4r7x9jgrp3p6x4nwrgzdh3r95"; depends=[FactoMineR irlba Matrix]; }; denovolyzeR = derive2 { name="denovolyzeR"; version="0.2.0"; sha256="03ya5clzqp12lfhw073ri0pwgxn53a6pvnais317a8bv1yinxspb"; depends=[dplyr reshape2]; }; denpro = derive2 { name="denpro"; version="0.9.2"; sha256="19hrpfd44jaavq81dbyj3frris4aflfc8lig0471whv0pc6jci2k"; depends=[]; }; - denseFLMM = derive2 { name="denseFLMM"; version="0.1.0"; sha256="0sckr9r2wylncpsq5yz2vww35imcc0zw8ghz8prqw2n20233gqj1"; depends=[MASS Matrix mgcv mvtnorm]; }; + denseFLMM = derive2 { name="denseFLMM"; version="0.1.2"; sha256="1lfhd73zvvz6glq41lb2a9x63fjwjfp53zmy9g78fg6gz5lbnbpm"; depends=[MASS Matrix mgcv mvtnorm]; }; densityClust = derive2 { name="densityClust"; version="0.3"; sha256="1zry0vafajzmr37aylglxfvwplhdygbkb9cvzvh8cy0xgnjrnx13"; depends=[FNN ggplot2 ggrepel gridExtra RColorBrewer Rcpp Rtsne]; }; densratio = derive2 { name="densratio"; version="0.0.3"; sha256="07da5spbzr8x7sv6pdknc64a5zhs3dgnpcx4s2v68vc31xsd0gqd"; depends=[]; }; - denstrip = derive2 { name="denstrip"; version="1.5.3"; sha256="10h8ivs7nd6gkf93zvqzqjb1lzfabvvs182636m67f86jfn6d4y4"; depends=[]; }; + denstrip = derive2 { name="denstrip"; version="1.5.4"; sha256="0hzxphj740q6pfa1q42knr7n12bmnawg7b2fs74msxn83dka5cmq"; depends=[lattice]; }; depend_truncation = derive2 { name="depend.truncation"; version="3.0"; sha256="1jym52qxx8v4kbq2578d03q2593q96jccr85if47djikw0aaxmcr"; depends=[mvtnorm]; }; depmix = derive2 { name="depmix"; version="0.9.14"; sha256="12mvsd9zab55yg02r309h5i7hldwhh3bd60bzcvwip8vsmym5611"; depends=[MASS]; }; depmixS4 = derive2 { name="depmixS4"; version="1.3-3"; sha256="0ls30v59hzyd684w4a3aygq1i5m8iq4gxsh8mmjxdq8qx0v84hk2"; depends=[MASS nnet Rsolnp]; }; @@ -5521,12 +5625,12 @@ in with self; { depth_plot = derive2 { name="depth.plot"; version="0.1"; sha256="0zjg9iyqmcnkvwc9w2j7lmk3k9nsg6n8m6vq5x44d1bp4g2gr6jv"; depends=[mvtnorm]; }; depthTools = derive2 { name="depthTools"; version="0.4"; sha256="1699r0h1ksgrlz9xafw2jnqfsc7xs0yaw97fc6dv3r11x6gxk00y"; depends=[]; }; dequer = derive2 { name="dequer"; version="2.0-1"; sha256="04kzlff8xa733qkkx0gacgig7d4l7yvgqmzva0mj8di12byh214p"; depends=[]; }; - derivmkts = derive2 { name="derivmkts"; version="0.2.2"; sha256="00bcffqzzsm2h4gfwri772q8i7h40xhv07wl8xj682fnlk246ggs"; depends=[mnormt]; }; + derivmkts = derive2 { name="derivmkts"; version="0.2.2.1"; sha256="02q3vc70rvh83zqjaql46n4qkfmn0x2kfg9ikyps34vg7clsaqs3"; depends=[mnormt]; }; desc = derive2 { name="desc"; version="1.1.1"; sha256="0k07qighac1xzmm8k988zi7i88a0yfvia3gk5hbz0fyvb2v9kzrj"; depends=[assertthat crayon R6 rprojroot]; }; descomponer = derive2 { name="descomponer"; version="1.4"; sha256="12zpkixclm6jmrgzvcy48c1mdqh9dgadzf9026wjyamphxkkjbip"; depends=[taRifx]; }; descr = derive2 { name="descr"; version="1.1.4"; sha256="05maviw8l8qhmy7p80gs3dlyy6pqk5k1686ny4xla4psj8mr7lbk"; depends=[xtable]; }; describer = derive2 { name="describer"; version="0.2.0"; sha256="1pjyihmn4gkaamixsc3qwynsc02pwv9bgn6s7z7acmmsybhhs6xn"; depends=[]; }; - descriptr = derive2 { name="descriptr"; version="0.4.0"; sha256="1v21fb90vhh7mjx9q29cbdvbxyi8sjcfbvdxf0xd8n7fkd6gd4yj"; depends=[dplyr forcats ggplot2 magrittr rlang scales shiny tibble tidyr]; }; + descriptr = derive2 { name="descriptr"; version="0.4.1"; sha256="1jpcfpidi49lyn02sl0hwsixzln9frrz03vrap1aq0phjcln39hh"; depends=[dplyr forcats ggplot2 magrittr rlang scales shiny tibble tidyr]; }; desctable = derive2 { name="desctable"; version="0.1.1"; sha256="188pw8fjgm2g88nraagmxbnpv4gg89vm6mxm9w9vk88iq4hgbhjc"; depends=[dplyr DT htmltools pander purrr]; }; deseasonalize = derive2 { name="deseasonalize"; version="1.35"; sha256="1fjsa7g34dckjs6mx9b10m99byxagggm0p9pw2f1vmpjqlasin0l"; depends=[FitAR lattice]; }; desiR = derive2 { name="desiR"; version="1.2.1"; sha256="0ghcv96bbwn74mka4dpf2lkpnlikjn3q6lx2sl8bbw77nriap0n6"; depends=[]; }; @@ -5535,14 +5639,14 @@ in with self; { designmatch = derive2 { name="designmatch"; version="0.3.0"; sha256="1i8xdc6z01x59gvxdmi6qjqwqi8s9zzgfaxwd7xj49r4cl6h81pd"; depends=[lattice MASS Rglpk slam]; }; desirability = derive2 { name="desirability"; version="2.1"; sha256="094gxvp6a60lfcc0a0gk9rv1p6ajnzq9m58sy8cvhcj5337g4fmk"; depends=[]; }; desire = derive2 { name="desire"; version="1.0.7"; sha256="0jmj644nj6ck0gsk7c30af9wbg3asf0pqv1fny98irndqv508kf6"; depends=[loglognorm]; }; - desplot = derive2 { name="desplot"; version="1.3"; sha256="06aa4ijxk34z9v309jnsapa7bc95wx2g2hbasljwrb90f2z87wq9"; depends=[lattice reshape2]; }; + desplot = derive2 { name="desplot"; version="1.4"; sha256="0brmdp095zcwx7gncng1ls972kr67ldwiq081wyafn9jm9z461ix"; depends=[lattice reshape2]; }; detect = derive2 { name="detect"; version="0.4-1"; sha256="0hq3imp4w6bd8x4njcfrvcs5lf0vrfnags1zdph86d7hlrwfds62"; depends=[Formula Matrix pbapply]; }; detectRUNS = derive2 { name="detectRUNS"; version="0.9.5"; sha256="0w4pz7waaabgsb47xcmgiz8bzlrs2a83y3v6j7bqb5125y1wn8hw"; depends=[data_table ggplot2 gridExtra iterators itertools plyr Rcpp reshape2]; }; detector = derive2 { name="detector"; version="0.1.0"; sha256="010i063b94hzx7qac8gpl67gmk7hzgqm9i1c7pbbw4la3wcd9lz7"; depends=[stringr]; }; - detpack = derive2 { name="detpack"; version="1.0.1"; sha256="00qyjhv7y5mk4h0a428i780fsvlamqnxv12kl6lqs776rhf0skfv"; depends=[]; }; + detpack = derive2 { name="detpack"; version="1.1.0"; sha256="11l863yr15db0v6r3fmsk3hvvx6xiidw876009x9gp5fwrv7l1cv"; depends=[]; }; detrendeR = derive2 { name="detrendeR"; version="1.0.4"; sha256="1z10gf6mgqybb9ml6z3drq65n7g28h2pqpilc2h84l6y76sy909c"; depends=[dplR]; }; - detrendr = derive2 { name="detrendr"; version="0.4.0"; sha256="0syxd5bds81ihm692bgps7wwl4n5fvi08jwd90hxaddksdskf2p6"; depends=[autothresholdr checkmate doParallel dplyr filesstrings foreach ijtiff iterators magrittr purrr Rcpp RcppParallel rlang RSAGA stringr]; }; - detzrcr = derive2 { name="detzrcr"; version="0.2.1"; sha256="1y1lbckm4a4m50x2a47r1wk47z4m4pvkslwgzcvw00nch47h9d8s"; depends=[ggplot2 MASS shiny]; }; + detrendr = derive2 { name="detrendr"; version="0.5.0"; sha256="0fmyssnwqqi36lklyv7dx9rv37ca8x0iq8nisx9q831yqxvd4lhm"; depends=[autothresholdr checkmate doParallel dplyr filesstrings foreach ijtiff iterators magrittr plyr purrr Rcpp RcppParallel rlang stringr]; }; + detzrcr = derive2 { name="detzrcr"; version="0.2.2"; sha256="1bv4l4aharp3gjj9ldri7ip3bfzhq57kkmihmlzdbvnk8ajdggwy"; depends=[ggplot2 MASS shiny]; }; devEMF = derive2 { name="devEMF"; version="3.6"; sha256="1n5i68f1j3d5yp0p0845zsvr4xhjrvj610wsb5rrlf90jwnarsx2"; depends=[]; }; devFunc = derive2 { name="devFunc"; version="0.1"; sha256="0f2s5gssk9napmah7zcss1rnh7pzlq90gzwcnvyr9rrq6k118n8q"; depends=[plyr stringr]; }; devRate = derive2 { name="devRate"; version="0.1.6"; sha256="0wm6nqnr76azpwg00cspi4n8r4w5qfkvm5qqp0kshv701pnbsjbp"; depends=[]; }; @@ -5553,13 +5657,14 @@ in with self; { dfcomb = derive2 { name="dfcomb"; version="2.4-2"; sha256="163sc18ka4wkf208ml7ghjsn43b3mbyf9zm4id563az6ckkzw45p"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; dfcrm = derive2 { name="dfcrm"; version="0.2-2"; sha256="1kwgxfqnz2bcicyb27lp6bnvrj30lqjpn5fg7kaqshgkj53g0s4f"; depends=[]; }; dfexplore = derive2 { name="dfexplore"; version="0.2.1"; sha256="04nbhn59l1kas26nwj4qflkjvvr33sj1mm7zg7fhvya85gvlhrbf"; depends=[ggplot2]; }; + dfmeta = derive2 { name="dfmeta"; version="1.0.0"; sha256="0ca48adfhaxac33jmxbynlyg3ak9l5mmjhlr69n4hnz6325gn9vb"; depends=[data_table ggplot2 lme4 plyr]; }; dfmta = derive2 { name="dfmta"; version="1.6-2"; sha256="0icpgsxhzd9y0d3xv82cy807wylxck7zn31g0b3nv0nq3jxy04jk"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; - dfoptim = derive2 { name="dfoptim"; version="2017.12-1"; sha256="03sh92ks29hcdy4ma1b5rs29f65q65wi30j1pxkmsjxkp8179jgf"; depends=[]; }; - dfped = derive2 { name="dfped"; version="1.0"; sha256="0xhyh5sm1a009pwfn2yb3vg2hr4sfpf9ifg09hqcvjx56pxfd8zh"; depends=[ggplot2 rstan]; }; + dfoptim = derive2 { name="dfoptim"; version="2018.2-1"; sha256="1gya0sx8ajy04kscds06d6m9prxdwr1dmyfc6awsm6r1jwbibzb3"; depends=[]; }; + dfped = derive2 { name="dfped"; version="1.1"; sha256="11ffsah14igba276m9d3cla0kgb3isizm5d7j1iqcd0wq23il7hq"; depends=[ggplot2 rstan]; }; dfphase1 = derive2 { name="dfphase1"; version="1.1.1"; sha256="0bk4bl5lqd7m4mzk6kg71fmh918wcy85zghr3lyayxlk30fl4ppc"; depends=[lattice Rcpp robustbase]; }; - dfpk = derive2 { name="dfpk"; version="3.4.0"; sha256="0fvvyn1zc0s0z4xaqinf8im2ynmbs7irh9q9h66ym1pxmrqhb5zw"; depends=[BH dfcrm ggplot2 PK Rcpp RcppEigen rstan StanHeaders]; }; + dfpk = derive2 { name="dfpk"; version="3.4.1"; sha256="1nmn5ir20wx3qvcf9rvnwnni5kqbn8adhc2354fb5gcvbnxlc7mc"; depends=[BH dfcrm ggplot2 PK Rcpp RcppEigen rstan StanHeaders]; }; dga = derive2 { name="dga"; version="1.2"; sha256="13mfampnghcs5xplzq69bw948lqhw561pn54j3gb0ydsg5bm5vmr"; depends=[chron]; }; - dggridR = derive2 { name="dggridR"; version="2.0.1"; sha256="1af5sn3py3my543vn6izqmlsc80rvyx7dqxprylk4pzsmc8yyx4c"; depends=[dplyr ggplot2 Rcpp rgdal sp]; }; + dggridR = derive2 { name="dggridR"; version="2.0.3"; sha256="1gdwxrl5c5mprfk7rx5mk8davi4mmg1crccxaaipnbnsilg9j9vh"; depends=[dplyr ggplot2 Rcpp rgdal sp]; }; dglars = derive2 { name="dglars"; version="2.0.0"; sha256="0nhljv02cfsna4d220nhla4fs84hr30qs9j32mml0brnmazyjj0n"; depends=[Matrix]; }; dglm = derive2 { name="dglm"; version="1.8.3"; sha256="0vj4vddqcrjzgqsi6zsxm22gj5pa5dm50wcxip4vi8kbwxaahnaj"; depends=[statmod]; }; dgmb = derive2 { name="dgmb"; version="1.2"; sha256="1r5md917wipx78n63x87fpvsc3h87c68cpacrrs9dhss199p1a5k"; depends=[abind MASS]; }; @@ -5568,8 +5673,9 @@ in with self; { dgof = derive2 { name="dgof"; version="1.2"; sha256="02qnb3i131hx05k8l5n3xbl5sqmmc2fh19bsgcacgj8ixs4wyjvi"; depends=[]; }; dhga = derive2 { name="dhga"; version="0.1"; sha256="1n48irj53g3kn451ak5ly50wxdn7qmzi2kib8clsvcx2n7mvpgcm"; depends=[VennDiagram]; }; dhglm = derive2 { name="dhglm"; version="1.7"; sha256="09wasgvjw0xc9k68m6a8lx372p2hywk4j6ikr9wjjjfl6f17j1cw"; depends=[boot MASS Matrix numDeriv]; }; - di = derive2 { name="di"; version="1.1.3"; sha256="1i3s1rw62iy49141b3lqy5d97iwcj6ihdhsz2716v2497c39qhhy"; depends=[scales]; }; + di = derive2 { name="di"; version="1.1.4"; sha256="1w2gjhyi410z98d8wnhbd69jxm69nz4pmnr4fb09i70a90f53s25"; depends=[scales]; }; diagis = derive2 { name="diagis"; version="0.1.3-1"; sha256="1cagcr5znhrg4fp96d79ly0z7bs3hhh3zfspclyfc88p2p3qsd96"; depends=[coda ggplot2 gridExtra Rcpp RcppArmadillo]; }; + diagmeta = derive2 { name="diagmeta"; version="0.2-0"; sha256="1qdpsn0c4g459p8p90p2a9fghiwjqqmmanz3zsa5a3lv7zxmk496"; depends=[lme4 meta]; }; diagonals = derive2 { name="diagonals"; version="0.4.0"; sha256="03n6lm0hkgylswgj1qlgrjigm7basl5frip99mxx19mvaqa3bhqy"; depends=[]; }; diagram = derive2 { name="diagram"; version="1.6.4"; sha256="0f6ffprn5k0ir1s7m9s7izc64aa17r3gnygagz5bihrlsvawaavw"; depends=[shape]; }; diaplt = derive2 { name="diaplt"; version="1.2.1"; sha256="0pya6rqzsvc5nd3smhydvabarglc4nn04q605vbllmbhq9rv00pa"; depends=[]; }; @@ -5577,6 +5683,7 @@ in with self; { diceR = derive2 { name="diceR"; version="0.4.0"; sha256="1pxkwrbm69b97jia7nc18sprvxqxwwvvvzmxh147wgpqlmgqq47m"; depends=[abind apcluster assertthat blockcluster caret class cli clue cluster clusterCrit clValid dbscan dplyr e1071 flux ggplot2 gplots Hmisc infotheo kernlab klaR kohonen largeVis magrittr mclust NNLM pheatmap progress purrr quantable RankAggreg RColorBrewer Rcpp Rtsne sigclust stringr tibble tidyr]; }; dichromat = derive2 { name="dichromat"; version="2.0-0"; sha256="1l8db1nk29ccqg3mkbafvfiw0775iq4gapysf88xq2zp6spiw59i"; depends=[]; }; dicionariosIBGE = derive2 { name="dicionariosIBGE"; version="1.6"; sha256="1rss1ydhcn6sma2lmlpq6s0h3dglwc20w499x1jzkcjnzc1rc7gl"; depends=[]; }; + did = derive2 { name="did"; version="1.0.0"; sha256="0fgwassb8m92iij78f045fl8441f1x9dhf4hnc93wl16yv5hh7g7"; depends=[BMisc formula_tools ggplot2 gridExtra knitr MASS pbapply]; }; didrooRFM = derive2 { name="didrooRFM"; version="1.0.0"; sha256="12clfnbm56jwldw0afb0nb0argnd97mx7369jiywhxy0p4xqibqq"; depends=[dplyr]; }; dief = derive2 { name="dief"; version="1.1"; sha256="0x3dwlfi130wmbsmm8vf66qxqn001b07yaiq6mp1s707dnl131mc"; depends=[flux fmsb ggplot2 plyr]; }; dielectric = derive2 { name="dielectric"; version="0.2.3"; sha256="1p1c0w7a67zxp1cb99yinylk5r1v89mmpfybcy94ydydhydbhivk"; depends=[]; }; @@ -5594,7 +5701,7 @@ in with self; { diffobj = derive2 { name="diffobj"; version="0.1.9"; sha256="1adqn472qbwrfb8m2iy3sfvj2n8g3d4h6xc3hqxpbv03yyfia2c2"; depends=[crayon]; }; diffpriv = derive2 { name="diffpriv"; version="0.4.2"; sha256="12q2v93369bshid83rsy1csbr9ay6rfpd8zdxm12zi7py3f9sjs8"; depends=[gsl]; }; diffr = derive2 { name="diffr"; version="0.1"; sha256="0ydwnpyzirynffsnvip667y0jqzy7yfqlfpqhb38xvmd9rmwfbp8"; depends=[htmlwidgets]; }; - diffractometry = derive2 { name="diffractometry"; version="0.1-8"; sha256="1m6cyf1kxm9xf1z4mn4iz0ggiy9wcyi8ysbgcsk7l78y7nqh1h99"; depends=[]; }; + diffractometry = derive2 { name="diffractometry"; version="0.1-10"; sha256="09mkqg6avky26c2dsnhpcmby76hfqg0pwmnjhkbp4px2k6c9inrc"; depends=[]; }; diffrprojects = derive2 { name="diffrprojects"; version="0.1.14"; sha256="1mnqf5zs1w8dx9y5iwn4blyzb9j60ayzc04zxj5l8804nd527n25"; depends=[dplyr hellno magrittr R6 Rcpp RSQLite rtext stringb stringdist]; }; diffrprojectswidget = derive2 { name="diffrprojectswidget"; version="0.1.5"; sha256="1h69mc1wayi80vz4b9cqydylf4kp9mxsigv05r0f903pqakdrzcw"; depends=[diffrprojects dplyr hellno htmlwidgets jsonlite magrittr tidyr]; }; diffusion = derive2 { name="diffusion"; version="0.2.7"; sha256="1j9s9vw5sc4k956bk4yp3bf4fnp7lhhkwcvlzvsh1w4dyaj8l35h"; depends=[dfoptim nloptr systemfit]; }; @@ -5610,10 +5717,10 @@ in with self; { diptest = derive2 { name="diptest"; version="0.75-7"; sha256="0rcgycgp0bf8vhga1wwgfcz3pqs5l26hgzsgf2f97dwfna40i1p1"; depends=[]; }; directPA = derive2 { name="directPA"; version="1.3"; sha256="0hcs56y69gdkfyk2xl0vxh01c19s6z1lfv02g056wxr24qfsx08c"; depends=[calibrate rgl]; }; directlabels = derive2 { name="directlabels"; version="2017.03.31"; sha256="01ahw0c56mnzwl611s8hnghicww4c4dgf5v2wv6bl1s1pramw9pr"; depends=[quadprog]; }; - dirichletprocess = derive2 { name="dirichletprocess"; version="0.2.0"; sha256="1q6rnrzyvkz9hn9czlm9sha80qsmrz7n4l3r8r1plkgrnf0biajv"; depends=[ggplot2 gtools mvtnorm]; }; + dirichletprocess = derive2 { name="dirichletprocess"; version="0.2.1"; sha256="0ip7mcjddqg7z9hqrvbxixvkqp9j4d92zgpk6hn6acd4fxhb17r6"; depends=[ggplot2 gtools mvtnorm]; }; dirmcmc = derive2 { name="dirmcmc"; version="1.3.3"; sha256="117p3jvinmha7a2phcpzq38ig05kcranp15xbxqvv0cgh3c95fjr"; depends=[mcmcse]; }; dirmult = derive2 { name="dirmult"; version="0.1.3-4"; sha256="1r9bhw1z0c1cgfv7jc0pvdx3fpnwplkxwz8j8jjvw14zyx803rnz"; depends=[]; }; - discSurv = derive2 { name="discSurv"; version="1.1.7"; sha256="0shxwxbvbbgp0qphpbih582d5psqj5n0izv7zvcw97vh82bzra4l"; depends=[functional mgcv mvtnorm]; }; + discSurv = derive2 { name="discSurv"; version="1.3.1"; sha256="0vq3g42xy97ksgsghhz232spkbkr2zs8i9nm7xwdabysi9fgqdsv"; depends=[functional mgcv mvtnorm]; }; discgolf = derive2 { name="discgolf"; version="0.2.0"; sha256="07clh1awnibgrh7vl4a51r8dbya2rbmicm8v8x8mq8h8am2b3j0s"; depends=[crul jsonlite xml2]; }; disclap = derive2 { name="disclap"; version="1.5"; sha256="0piv9gxhxcd4pbh5qjn9c3199f32y3qiw5vy8cr77ki70dnmr66n"; depends=[]; }; disclapmix = derive2 { name="disclapmix"; version="1.6.2"; sha256="01pn8hy3xbf1b1fbbsd4n2hv7gs97zalgq858xsrr4a0nqrvxmn5"; depends=[cluster disclap Rcpp]; }; @@ -5627,9 +5734,10 @@ in with self; { diskImageR = derive2 { name="diskImageR"; version="1.0.0"; sha256="1r19k5fdjn6vkn11p5df77fnxfqaz3nciiaai0f3pr2bgpfppzka"; depends=[subplex zoo]; }; dismo = derive2 { name="dismo"; version="1.1-4"; sha256="1j4pzbyvn8msi3k2y79nc6pqlrald46168ibznjwrr6rdiqhy4gj"; depends=[raster sp]; }; disp2D = derive2 { name="disp2D"; version="1.0"; sha256="0q5bds2r1mqzcwmnj61dmwqv6b0s0scq5h3nim47q3wp0n4gbslz"; depends=[geometry]; }; + dispRity = derive2 { name="dispRity"; version="1.0.3"; sha256="1swix45fcr0hn21pvy2dwsnbr60bvsdjk8vwh432p0s69c372m3l"; depends=[ade4 ape geiger geometry geoscale paleotree phangorn phyclust vegan]; }; disparityfilter = derive2 { name="disparityfilter"; version="2.2.3"; sha256="0dkk3qws631mf0g02di5rsrvh5954cykysyri0g8aqgik0j9dg06"; depends=[igraph]; }; displayHTS = derive2 { name="displayHTS"; version="1.0"; sha256="0mqfdyvn2c5c3204ykyq29ydldsq0kb3a1d7mrzqr7cvrj1ahlqa"; depends=[]; }; - dispmod = derive2 { name="dispmod"; version="1.1"; sha256="141gzhnmxxl495cpjgd4wnvdrbz6715m6sd1pycrbaqrsdc1pv57"; depends=[]; }; + dispmod = derive2 { name="dispmod"; version="1.2"; sha256="16r6is0pchzc9mxpz0c44f72j76vsh3j9damalcxajrha06dkdq4"; depends=[]; }; disposables = derive2 { name="disposables"; version="1.0.3"; sha256="0q5wacjclspn2fh7z1pg2l67ll51n75wck5h2fdq2vxy3qn3vwis"; depends=[]; }; dissUtils = derive2 { name="dissUtils"; version="1.0"; sha256="00fzlmkdfw2s3k824wp2pk3v7cvxnywi1hfp86g4mm95z2qlw9br"; depends=[]; }; dissever = derive2 { name="dissever"; version="0.2-2"; sha256="0s4g84lq15i00vpaafwmcbspdqy23cbj2fbyfnq60mzllyzgs0n2"; depends=[boot caret dplyr foreach magrittr plyr raster sp viridis]; }; @@ -5661,6 +5769,7 @@ in with self; { divo = derive2 { name="divo"; version="1.0.0"; sha256="0xy4yxvx2grskdzb5z73mhgrq0nfhdkm2hxahdns7pb1fgajxyjx"; depends=[cluster]; }; dixon = derive2 { name="dixon"; version="0.0-6"; sha256="1prvr16a9n7qyaznir2bl7mg6nlvbdv9pk75p3xipzjg36hwyam8"; depends=[spatstat splancs]; }; dkDNA = derive2 { name="dkDNA"; version="0.1.1"; sha256="0ycyzn5bmhjl5idp0lndffkninpm9n23wrkrzi59ac8z8ghsnhf4"; depends=[]; }; + dkanr = derive2 { name="dkanr"; version="0.1.0"; sha256="05sw0rdfl5fr9v67lixbk2jmsxi2gdbyb6bzkf80ynp1y1izxyzq"; depends=[assertthat dplyr httr jsonlite purrr stringr tibble]; }; dlib = derive2 { name="dlib"; version="1.0"; sha256="0d6p28r86jq7gwqh3njnsfgl6mmgx7famqx7p1xmra91cdlp3hqj"; depends=[Rcpp]; }; dlm = derive2 { name="dlm"; version="1.1-4"; sha256="0hyphl90bqc16j7in750pmiyq28hmc46kxgv7gj17c8xl9c9xqxm"; depends=[]; }; dlmap = derive2 { name="dlmap"; version="1.13"; sha256="0s6wlkggkm3qndwyvw72xv1n0mcjb7ss3ajbq2ll6rv30splq0db"; depends=[ibdreg mgcv nlme qtl wgaim]; }; @@ -5677,7 +5786,7 @@ in with self; { dnet = derive2 { name="dnet"; version="1.1.3"; sha256="1av4kbcbhpj1ivz6ln26p80z5fd170971mrcy59zm67h6kdi56az"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; dng = derive2 { name="dng"; version="0.1.1"; sha256="04r06k6mmif7kbpham52dq2zv5rijjnsdc3sgxz6kbh5mqdn6jfq"; depends=[Rcpp]; }; dnr = derive2 { name="dnr"; version="0.3.2"; sha256="0f5xahd86x196mg7c9zrhxj7c8cg7mrnd4nzyr02xcym6cff6vqm"; depends=[arm ergm glmnet igraph network sna]; }; - doBy = derive2 { name="doBy"; version="4.5-15"; sha256="0n1ml47f78nqhy92a0fgsb4brz0qyfr4q3c7im8pnb0ngia4ssdx"; depends=[MASS Matrix]; }; + doBy = derive2 { name="doBy"; version="4.6-1"; sha256="1y02awzid23bxz8hx6j8pxd6i7jaq8pdw3k60rag8y6m69incrw5"; depends=[dplyr magrittr MASS Matrix plyr]; }; doFuture = derive2 { name="doFuture"; version="0.6.0"; sha256="04pvs2h1ibdbl6cph30rvdn5vzj9afllvh8f0iy64pgy83vls790"; depends=[foreach future iterators]; }; doMC = derive2 { name="doMC"; version="1.3.5"; sha256="1vfrykvfvsyq12mypd266867ml1dcwc3rj5k9c3wrn5bddcm88kr"; depends=[foreach iterators]; }; doMPI = derive2 { name="doMPI"; version="0.2.2"; sha256="0ahwm17p3gq1yvc8v6sr6sb8z7i6zws8d1pf46qynl0gd4amg938"; depends=[foreach iterators Rmpi]; }; @@ -5687,13 +5796,13 @@ in with self; { doSNOW = derive2 { name="doSNOW"; version="1.0.16"; sha256="13ir4a8252h4yvp5ir9xnwack1kn58i4ny6sf2qdc12zspn3850n"; depends=[foreach iterators snow]; }; dobson = derive2 { name="dobson"; version="0.2"; sha256="1fyf4dyzpg6hqdvr8n4ncs4dny8mg23nxbd49jd3mrlajszzg0vp"; depends=[]; }; docker = derive2 { name="docker"; version="0.0.2"; sha256="00zq4zmv2y6q069q92dn8db2bj96kfy7pv2s58q21dxkp1c4s6qg"; depends=[reticulate]; }; - dockerfiler = derive2 { name="dockerfiler"; version="0.1.0"; sha256="16y70blrv9crmgrcnq6dk3bjk73ajlkxv72xj3qrmw78zjy5an19"; depends=[attempt glue R6]; }; + dockerfiler = derive2 { name="dockerfiler"; version="0.1.1"; sha256="17r8az17vkj46cljp0pa15xh9x2p5w85csm2hickfk2lyg2pbjnx"; depends=[attempt glue R6]; }; docopt = derive2 { name="docopt"; version="0.4.5"; sha256="1pwng6018ls0hk785bs8yjwpzsqr2pcvzgpavqd9rw19n5lvzhxn"; depends=[stringr]; }; docopulae = derive2 { name="docopulae"; version="0.3.3"; sha256="13889sj509gbl9zs7jqdvslp6sc81jv54cbqh1wpp834jp5s1q3x"; depends=[]; }; docstring = derive2 { name="docstring"; version="1.0.0"; sha256="19z5frhxbdc5c4vrkckgqbh9mx4d9w1icw8szsw9yadvbg48nlhl"; depends=[roxygen2]; }; docuSignr = derive2 { name="docuSignr"; version="0.0.3"; sha256="0q90z31svbdnvylfr0yj2f0gahvpi089c1d5llvwqy8qc5p9fbqw"; depends=[httr jsonlite magrittr]; }; documair = derive2 { name="documair"; version="0.6-0"; sha256="1pphcbx90n9xn8a7gvfrwzfapwqgpbl3gg2grm7chfxgcp7i99i2"; depends=[]; }; - document = derive2 { name="document"; version="3.0.0"; sha256="1jd7pgifnlffibmmsflgp0gbv83qclqsfi8glvr9kfxw66yx0mhq"; depends=[callr checkmate desc rcmdcheck roxygen2 rstudioapi withr]; }; + document = derive2 { name="document"; version="3.0.1"; sha256="1pmms1mrldjqsd2zrmpyxz86xykgq1ld4l4gv9gd1ycd7r8v0f8p"; depends=[callr checkmate desc rcmdcheck roxygen2 rstudioapi withr]; }; docxtools = derive2 { name="docxtools"; version="0.1.1"; sha256="1mlgl9105mifzdgf57spgr2rr5740ghr5afmlskxn6ind7jfka70"; depends=[dplyr ggplot2 pander stringr tidyr]; }; docxtractr = derive2 { name="docxtractr"; version="0.2.0"; sha256="197j57ab8x960b1yfq6xp8fwmq51xs04nf0cb16r161h4bcmgs2j"; depends=[dplyr purrr tibble xml2]; }; dodgr = derive2 { name="dodgr"; version="0.0.3"; sha256="161qy9iyszpb44v26zn6w4d7c9bw8pg7vwgqcba0k0xc5dnr2wjc"; depends=[igraph magrittr osmdata rbenchmark Rcpp sp]; }; @@ -5702,7 +5811,7 @@ in with self; { dostats = derive2 { name="dostats"; version="1.3.2"; sha256="15j9sik9j5pic5wrp0w26xkrhi337xkbikw0k7sa4yfimw6f84w5"; depends=[]; }; dotCall64 = derive2 { name="dotCall64"; version="0.9-5.2"; sha256="1jw0kyw95nivjimh25ri9sigqwlvk12kd45ydsh1yggigzc0k23k"; depends=[]; }; dotenv = derive2 { name="dotenv"; version="1.0.2"; sha256="13i8dimrgq9nxmmrxr42pacsiylj6dilwpa8ldnrfp4cl9zgrqas"; depends=[]; }; - dotwhisker = derive2 { name="dotwhisker"; version="0.3.0"; sha256="1sbj8blnqnsyvf7pq2cc9q7nqb66n0v2gi2rr09yjlppf7v1pcjf"; depends=[broom dplyr ggplot2 ggstance gridExtra gtable plyr stringr]; }; + dotwhisker = derive2 { name="dotwhisker"; version="0.4.1"; sha256="1wmb9c0c6r0f36cks72y2jp1iwi6hxjqchq4z76vlcdxq09gmq3g"; depends=[broom dplyr ggplot2 ggstance gtable purrr rlang stringr]; }; doubcens = derive2 { name="doubcens"; version="1.1"; sha256="1hn65n67by3xqbcnaf5jja5pli0g6wpbbz2sfzd7i2nms7kiywhp"; depends=[]; }; downloader = derive2 { name="downloader"; version="0.4"; sha256="1axggnsc27zzgr7snf41j3zd1vp3nfpmq4zj4d01axc709dyg40q"; depends=[digest]; }; downscale = derive2 { name="downscale"; version="2.0-3"; sha256="0jvzvmwhpdr7ygcxky4yl1ldb843hrmnzhmnvl0694mmswwqsf8l"; depends=[cubature minpack_lm raster Rmpfr sp]; }; @@ -5721,9 +5830,9 @@ in with self; { dprep = derive2 { name="dprep"; version="3.0.2"; sha256="0iw1pqpqlv436wpwh1w832aqvy91zvxmbk2jdw7aczrb29wys2bj"; depends=[class e1071 FNN MASS nnet rgl rpart StatMatch]; }; dprint = derive2 { name="dprint"; version="0.0.4"; sha256="13bq6yjlp5p5rcsz684rqcigp42xnz3p5phnqmrhzm874gfzm8rj"; depends=[]; }; dr = derive2 { name="dr"; version="3.0.10"; sha256="0dmz4h7biwrn480i66f6jm3c6p4pjvfv24pw1aixvab2vcdkqlnf"; depends=[MASS]; }; - dr4pl = derive2 { name="dr4pl"; version="1.0.0"; sha256="1gcddnjmzqm16vzqvh8hxw2spvfa41jmapf7n87lv100j5f8ahl5"; depends=[devtools drc ggplot2 Matrix Rdpack tensor testthat]; }; + dr4pl = derive2 { name="dr4pl"; version="1.1.1"; sha256="1wh7mdns9vxjkfphj2nqllh7q3k3lch5y0b4yzf3j4xrd0wyf2hm"; depends=[ggplot2 Matrix matrixcalc Rdpack tensor]; }; drLumi = derive2 { name="drLumi"; version="0.1.2"; sha256="09ps8rcqrm6a1y8yif2x82l0k4jywq60pkndh9nzfpbsw4ak2lby"; depends=[chron gdata ggplot2 Hmisc irr minpack_lm msm plyr reshape rootSolve stringr]; }; - drake = derive2 { name="drake"; version="5.0.0"; sha256="0hldxadlcl3m249rb68yikvn4gck98zj2x67jjxfgas27a1n4pjx"; depends=[codetools crayon digest evaluate formatR future future_apply igraph knitr lubridate magrittr plyr R_utils rprojroot storr stringi stringr testthat visNetwork withr]; }; + drake = derive2 { name="drake"; version="5.1.2"; sha256="18f0mxbzz50dli3y4fzyh5qgk8ccxrvqy8a3xsc5xq4y0ilq8kvf"; depends=[bindr CodeDepends crayon digest dplyr evaluate formatR future future_apply igraph knitr lubridate magrittr pkgconfig plyr purrr R_utils R6 rlang rprojroot storr stringi testthat tibble tidyselect visNetwork withr]; }; drat = derive2 { name="drat"; version="0.1.4"; sha256="0vrpqf793vinx4v7jrbn910iplvpmrlwhdjqqzx8cl2k9hl43x08"; depends=[]; }; drawExpression = derive2 { name="drawExpression"; version="1.0"; sha256="0c2daicqrjlqf7s788cknzvw9c6rm500lgmwfr7z03bq7bd2ah90"; depends=[]; }; drc = derive2 { name="drc"; version="3.0-1"; sha256="0c8xn8ripzq270hy8d16fcnx02l02alddznd7fqwk3jyi6113h1y"; depends=[car gtools MASS multcomp plotrix scales]; }; @@ -5752,7 +5861,7 @@ in with self; { dtt = derive2 { name="dtt"; version="0.1-2"; sha256="0n8gj5iylfagdbaqirpykb01a9difsy4zl6qq55f0ghvazxqdvmn"; depends=[]; }; dtw = derive2 { name="dtw"; version="1.18-1"; sha256="1b91vahba09cqlb8b1ry4dlv4rbldb4s2p6w52gmyw31vxdv5nnr"; depends=[proxy]; }; dtwSat = derive2 { name="dtwSat"; version="0.2.3"; sha256="10b0hs9kn5ljfv28iz62h966zb1pxsfrr6fx45d4427gr6fg8ncz"; depends=[caret dtw ggplot2 lubridate mgcv plyr proxy raster RColorBrewer reshape2 rgdal scales sp xtable zoo]; }; - dtwclust = derive2 { name="dtwclust"; version="5.3.0"; sha256="0p6v7d7lp5fsbky5c1qcss2cxx4x5w0ass0ami15aijdb8154qyf"; depends=[bigmemory clue cluster dplyr dtw flexclust foreach ggplot2 ggrepel Matrix nloptr proxy Rcpp RcppArmadillo RcppParallel reshape2 RSpectra shiny shinyjs]; }; + dtwclust = derive2 { name="dtwclust"; version="5.3.1"; sha256="0lm8y63gx096vdnza7mcqllfnl56vaz8dnrnm7f7jvwgmkqkj1xy"; depends=[bigmemory clue cluster dplyr dtw flexclust foreach ggplot2 ggrepel Matrix nloptr proxy Rcpp RcppArmadillo RcppParallel reshape2 RSpectra shiny shinyjs]; }; dualScale = derive2 { name="dualScale"; version="0.9.1"; sha256="11hqxprai0s5id6wk4n2q174r1sqx9fzw3fscvqd2cgw8cjn1iwl"; depends=[ff lattice Matrix matrixcalc vcd]; }; dub = derive2 { name="dub"; version="0.1.0"; sha256="0sdk8sppjcfx2bsngpngm2446warsnipzzw4yz5z4jpickp52ay0"; depends=[]; }; duckduckr = derive2 { name="duckduckr"; version="1.0.0"; sha256="1wki8xvqp5hr27iafd9jbryl9faywfkdkpn0pa0afywbic39k2cm"; depends=[crul jsonlite]; }; @@ -5766,7 +5875,7 @@ in with self; { dwapi = derive2 { name="dwapi"; version="0.1.3"; sha256="149v1yjnrdbqjg7cpnanm1jv1dcpzqy264qk5dx8wvw9kdc5h3b8"; depends=[httr jsonlite readr rjson xml2]; }; dyads = derive2 { name="dyads"; version="1.1"; sha256="0jlyg4bz3zp4g5ig0swwi72bxaj85wll05h6vishnvmnprpdc96n"; depends=[MASS mvnfast]; }; dygraphs = derive2 { name="dygraphs"; version="1.1.1.4"; sha256="0vwg9q7xrwxkm92d55ik9gdky42bj3jlh6fi4jzwyl5nfdswklb9"; depends=[htmltools htmlwidgets magrittr xts zoo]; }; - dyn = derive2 { name="dyn"; version="0.2-9.3"; sha256="00h75kqfpr77jhppnpxvykbdcmsmsb2vl2527xzq10wkvm7gfpvv"; depends=[zoo]; }; + dyn = derive2 { name="dyn"; version="0.2-9.6"; sha256="16fqv9k7yxdgybwzafjkyqm16qpgqz13lcjpi6a1nc8xbzlzh0gb"; depends=[zoo]; }; dynBiplotGUI = derive2 { name="dynBiplotGUI"; version="1.1.5"; sha256="0fvyn33mzjcc3sis05phc6412y25m406il2wzdfw8caa8dafj0yw"; depends=[tcltk2 tkrplot]; }; dynCorr = derive2 { name="dynCorr"; version="1.1.0"; sha256="0l5k764j1zhsqpgp0ndihah63hsk3zv9hviixfmh4h3i0sr0q52p"; depends=[lpridge]; }; dynOmics = derive2 { name="dynOmics"; version="1.0"; sha256="10aw362hhwqdnjf7xxzy25fdxq2zznzvg6xwvl25a9ppj76nm1rh"; depends=[ggplot2 gplots snow]; }; @@ -5784,6 +5893,7 @@ in with self; { dynlm = derive2 { name="dynlm"; version="0.3-5"; sha256="1sjhhlvvcgmayb9dfwacv1g75c4lhbpzyczj6h7gkd19bcfbdhqp"; depends=[car lmtest zoo]; }; dynpanel = derive2 { name="dynpanel"; version="0.1.0"; sha256="073kfl5g4d7v8wd2qnpixqrxbac3cqj35z03ax2zlb8h2afa7j62"; depends=[gtools]; }; dynpred = derive2 { name="dynpred"; version="0.1.2"; sha256="111ykasaiznn3431msj4flfhmjvzq7dd1mnzn1wklc5ndix1pvf9"; depends=[survival]; }; + dynprog = derive2 { name="dynprog"; version="0.1.0"; sha256="1rvn2zyhdi60y01zbvfv4him6iz2ljdr7ivkr7m7y7yd1lg547ax"; depends=[rlang]; }; dynr = derive2 { name="dynr"; version="0.1.12-5"; sha256="1l9waqwg5mkqy8ipryickrkf141mjpzdvsc4qbw8bq4rkrgykklc"; depends=[ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 xtable]; }; dynsbm = derive2 { name="dynsbm"; version="0.5"; sha256="01vi4qzgp25l4wg2ij9pqrn775x4yj9gck0l397nwjg96pa7x2lz"; depends=[RColorBrewer Rcpp riverplot]; }; dynsim = derive2 { name="dynsim"; version="1.2.1"; sha256="0nkxn9v4f353fhcn1vsdrh29mrms10zid63b84flg3c6hvc0x4qr"; depends=[ggplot2 gridExtra MASS]; }; @@ -5797,10 +5907,10 @@ in with self; { ePCR = derive2 { name="ePCR"; version="0.9.9-4"; sha256="0lnkb4zffn62vbx8hh953z9zh0plj8l15cc1k3x936zblzgd226r"; depends=[Bolstad2 c060 glmnet hamlet impute MASS Matrix pracma ROCR survival timeROC]; }; eRm = derive2 { name="eRm"; version="0.16-0"; sha256="18shx4jjvymhzdab1qvlfqnmg49mwllyw3v46j9v19dy6h9l3n8m"; depends=[lattice MASS Matrix]; }; eVenn = derive2 { name="eVenn"; version="2.4"; sha256="1qs5qsrc89kb6w6xqc8jdxkih6h48zprvavffdqhxq4ab4i1nvbf"; depends=[]; }; - eaf = derive2 { name="eaf"; version="1.07"; sha256="0310lrqfm1l0lifak7wa6xn21bzzn27kbrrx0bidj4hibwv7sa4l"; depends=[modeltools]; }; + eaf = derive2 { name="eaf"; version="1.8"; sha256="1plzvfa2vs3njky7xk9dvic2xapdnzb5iycrksv0qj03ylbh6410"; depends=[modeltools]; }; earlyR = derive2 { name="earlyR"; version="0.0.1"; sha256="14davqhh3n5dfsddnfd79ni56bssrpwhvkqkdb77a8x9fn8w32pv"; depends=[distcrete EpiEstim epitrix]; }; earlywarnings = derive2 { name="earlywarnings"; version="1.0.59"; sha256="06j5g5lrzl4p5pb1pp79h00iqpbwralzhpzxmaiymv7j8kz87nr0"; depends=[fields ggplot2 Kendall KernSmooth lmtest moments nortest quadprog som spam tgp tseries]; }; - earth = derive2 { name="earth"; version="4.6.1"; sha256="0hrbpa0qvhsdrdi06p0kdl2mw0n84sxcrqk96f6rh7cb6j8bm9bg"; depends=[plotmo TeachingDemos]; }; + earth = derive2 { name="earth"; version="4.6.2"; sha256="1ma2qgbkw0if93wd6fk6611xkznadfxy6v6xawrk4n9b5im3j6f4"; depends=[plotmo TeachingDemos]; }; earthtones = derive2 { name="earthtones"; version="0.1.0"; sha256="1phl50bgd40i36fdkfs9xkqm703vgwxlnpyik6lk8ssip0m4rn9j"; depends=[ggmap]; }; easyAHP = derive2 { name="easyAHP"; version="0.1.1"; sha256="161mn90j9ph1p9277mj61hch8ndcv7k9izs32q93y5wp474gzynd"; depends=[]; }; easyDes = derive2 { name="easyDes"; version="3.0"; sha256="1z4ynd1ck2vxsshygjgnhyzg8i41kpnwsfix96nmgwm3861n0phb"; depends=[multcomp PMCMR]; }; @@ -5842,7 +5952,7 @@ in with self; { ecosim = derive2 { name="ecosim"; version="1.3"; sha256="00arz8j2az1nn4p96pshw0p9xxq2qfgkyrf4ahvl1hp1h3k68jfn"; depends=[deSolve stoichcalc]; }; ecospace = derive2 { name="ecospace"; version="1.3.1"; sha256="0xrhlhpndycj2hdf50lygymc1hwmczx74r6l9f2qmm6v90c0729k"; depends=[FD]; }; ecospat = derive2 { name="ecospat"; version="2.2.0"; sha256="0awzhzl90j72jxp7qk5q5vqmgyccbkw2rbw0jrhjvlwkr5q9gyvx"; depends=[ade4 adehabitatHR adehabitatMA ape biomod2 classInt dismo doParallel ecodist foreach gbm gtools iterators maptools MigClim PresenceAbsence randomForest raster rms sp spatstat vegan]; }; - ecotox = derive2 { name="ecotox"; version="1.3.0"; sha256="05k3hdz25kw28222bnlk814b2rlwq2f6b5kdqxqls9wdfvdknij3"; depends=[ggplot2]; }; + ecotox = derive2 { name="ecotox"; version="1.3.1"; sha256="1is4zn7rabpibpnyy9mwpcjdhhb02r0a2r5azw9i5asshr2d1ywi"; depends=[ggplot2 magrittr]; }; ecotoxicology = derive2 { name="ecotoxicology"; version="1.0.1"; sha256="084xkr59d7x9zxmsnsyym2x8jshz6ag6rvnmhd1i6fzar8ypwccb"; depends=[]; }; ecoval = derive2 { name="ecoval"; version="1.1"; sha256="0ihig6nq3lrz6lzix92lrlzywnqkzsp5lrbccn5slhxdj5llird2"; depends=[rivernet utility]; }; ecp = derive2 { name="ecp"; version="3.1.0"; sha256="0siq5acpy4wmqzm6zvpqj1m8a05hgk5jhb1clv06y40kqk5kjrap"; depends=[Rcpp]; }; @@ -5852,7 +5962,7 @@ in with self; { edcc = derive2 { name="edcc"; version="1.0-0"; sha256="036fi6mnn9480hkb378xb5jilkfvdydjmkyw4mcc9s1lz195f62w"; depends=[spc]; }; edci = derive2 { name="edci"; version="1.1-2"; sha256="10rqkimvmyb7hxp4wkpj8bq07q3yaimm058d4mmr09fw25lqyz1q"; depends=[]; }; edeR = derive2 { name="edeR"; version="1.0.0"; sha256="1dg0aqm5c4zyf015hz1hhn3m4lfvybc4gc1s7sp8jcsk46rxz0cc"; depends=[rJava rjson rJython]; }; - edeaR = derive2 { name="edeaR"; version="0.7.2"; sha256="0k043g2qrm58l7dvb2ylpg76wcznkr4p4vp2p3b4hhg1hzq8zccf"; depends=[bupaR data_table dplyr ggplot2 ggthemes glue lubridate miniUI purrr rlang shiny shinyTime stringr tibble tidyr]; }; + edeaR = derive2 { name="edeaR"; version="0.8.0"; sha256="1qpkb5ysz5lbkqdxszgzkn7s77h6fqqd62pc0nn2abjgq2hb8a9j"; depends=[bupaR data_table dplyr ggplot2 ggthemes glue lubridate miniUI purrr rlang shiny shinyTime stringr tibble tidyr]; }; edesign = derive2 { name="edesign"; version="1.0-13"; sha256="0fc3arr8x9x9kshp6jq4m4izzc5hqyn5vl0ys6x0ph92fc6mybp3"; depends=[]; }; edf = derive2 { name="edf"; version="1.0.0"; sha256="14ikm6j0ndxrk7c7lh5mbd2aci46d4j9a30mvcgnxy3kq6046a7b"; depends=[]; }; edfReader = derive2 { name="edfReader"; version="1.2.0"; sha256="0r4918swpfddz246kkvy10a07s178zmwp7m4ydxvi8di6iga76hk"; depends=[]; }; @@ -5878,7 +5988,8 @@ in with self; { eesim = derive2 { name="eesim"; version="0.1.0"; sha256="0ljj1jp9cl0im8k7sfjd28ggj4q9a14df3554kwxkssr1vsn1wbc"; depends=[dplyr lubridate purrr viridis]; }; effectFusion = derive2 { name="effectFusion"; version="1.0"; sha256="1nx61n4lgnj6wh4arqm62p9xwxqvz4g7bs4b5k3ybkhmh6ns9v5l"; depends=[bayesm cluster ggplot2 MASS Matrix]; }; effectR = derive2 { name="effectR"; version="1.0.0"; sha256="08r1jifrqa9fxm5jp6jsvazdpql53kpm6mj0sg70hvd8q0cilryb"; depends=[ggplot2 reshape2 seqinr shiny viridis]; }; - effects = derive2 { name="effects"; version="4.0-0"; sha256="0h3247xcccanp0cp18r5k4l87i9862yjr5jc8sxcsfvjzn13xgf6"; depends=[carData colorspace lattice lme4 nnet survey]; }; + effects = derive2 { name="effects"; version="4.0-1"; sha256="042f6gb799agqqxawd6ddlzplyxkd1h5v9pm759zmnj2094smw6q"; depends=[carData colorspace estimability lattice lme4 nnet survey]; }; + effectsizescr = derive2 { name="effectsizescr"; version="0.1.0"; sha256="0shfjk6r3bz04jakrn5nwgymjx60lk83i0akcx7zqfxp3k8yncs5"; depends=[Kendall]; }; efflog = derive2 { name="efflog"; version="1.0"; sha256="1sfmq7xrr6psa6hwi05m44prjcpixnrl7la03k33n0bksj8r1w6b"; depends=[]; }; effsize = derive2 { name="effsize"; version="0.7.1"; sha256="0l0ja7qcknn8r5hf7nrjk5cy0ajw0z60ggbyj8qvjzf8qah4mlss"; depends=[]; }; efreadr = derive2 { name="efreadr"; version="0.2.2"; sha256="1h27by1m451wrnw017005avs5yj3fjzrm2lq5153aqm1mbbxxwvs"; depends=[dplyr ensurer magrittr readr]; }; @@ -5901,7 +6012,7 @@ in with self; { elastic = derive2 { name="elastic"; version="0.8.0"; sha256="17aqf0a3spwh8k7s3kgnccbgad3sr3w63if96piygjz0lxgc7kzs"; depends=[curl httr jsonlite]; }; elasticIsing = derive2 { name="elasticIsing"; version="0.2"; sha256="1zjgvz7w5j06x2cd1fzjl85di95ah67m1lanw01kic2bvhfwfbn6"; depends=[cvTools glmnet magrittr qgraph reshape2]; }; elasticnet = derive2 { name="elasticnet"; version="1.1"; sha256="1x8rwqb275lz86vi044m1fy8xanmvs7f7irr1vczps1w45nsmqr2"; depends=[lars]; }; - elasticsearchr = derive2 { name="elasticsearchr"; version="0.2.1"; sha256="1x20w13hkpnf1kjvml99a9q1w162f6703ccqvcqy6z0vamcvylw8"; depends=[httr jsonlite]; }; + elasticsearchr = derive2 { name="elasticsearchr"; version="0.2.2"; sha256="0jawypqlk8374izh3gq9k6fwc2gwn74xa9lbmx4ww3rq2xp90xw6"; depends=[httr jsonlite]; }; elec = derive2 { name="elec"; version="0.1.2"; sha256="0f7ahrjb52w8a8l5v00xla6z9afpz2zrckl9v04xalp34snhdwan"; depends=[]; }; elec_strat = derive2 { name="elec.strat"; version="0.1.1"; sha256="09196k5c3jsikh98d33bn70izwcbx0wb5ki9fv1ij0dw9mnv4c3p"; depends=[elec]; }; elect = derive2 { name="elect"; version="1.1.1"; sha256="025h69qsify0v3bsr9082wjdkglmarkjaqqkwr8j826466617n1v"; depends=[msm nnet]; }; @@ -5919,15 +6030,15 @@ in with self; { elo = derive2 { name="elo"; version="1.0.1"; sha256="0dhlac5l68a3jps2hx0bc7qjj8hsr1ha137hcwxnrfdwnki6chlp"; depends=[pROC Rcpp]; }; elrm = derive2 { name="elrm"; version="1.2.2"; sha256="0wz0l703v0iyp7nswdmh65n0cy3a7rfvyxd795a6nzk3nich8bfg"; depends=[coda]; }; emIRT = derive2 { name="emIRT"; version="0.0.8"; sha256="17igda5phgfapjzg7dkid5jj49gmwgpadjr27z7s21365i7md9mz"; depends=[pscl Rcpp RcppArmadillo]; }; - embryogrowth = derive2 { name="embryogrowth"; version="7.1"; sha256="0gm5ww7vwc6kcv6lzrca4f9a6nkilb79d5b4kidfhwrcbfrkdb2k"; depends=[deSolve HelpersMG numDeriv optimx]; }; + embryogrowth = derive2 { name="embryogrowth"; version="7.4"; sha256="10h80jy391bm1avmh347ly3a1vhlhbpfbhrf39xl7x4nwcckd6bp"; depends=[deSolve HelpersMG numDeriv optimx]; }; emdbook = derive2 { name="emdbook"; version="1.3.9"; sha256="09xbdyw8a4pvrsg3ryr8drby0njy4avc5wsjj4ffibdaicpchy69"; depends=[bbmle coda lattice MASS plyr]; }; - emdi = derive2 { name="emdi"; version="1.1.1"; sha256="1gbjx0pxfzkbp0csgq07iwqqww5lixpkvwn3k53na65gwx9afsq4"; depends=[boot FNN ggmap ggplot2 gridExtra HLMdiag maptools MASS moments MuMIn nlme openxlsx parallelMap reshape2 rgeos simFrame]; }; + emdi = derive2 { name="emdi"; version="1.1.2"; sha256="135dnc7djxa7kyhaa0rd42m396ccic4mgd5pq4qj8zqgd2swj2aa"; depends=[boot ggplot2 gridExtra HLMdiag maptools MASS moments MuMIn nlme openxlsx parallelMap readODS reshape2 rgeos]; }; emdist = derive2 { name="emdist"; version="0.3-1"; sha256="1z14pb9z9nkd0f2c8pln4hzkfqa9dk9n3vg8czc8jiv0ndnqi7rq"; depends=[]; }; emg = derive2 { name="emg"; version="1.0.6"; sha256="1kzmxs224m6scmk8gg5ckx5c7is99hwgwv28yl26hnrbkm59skyh"; depends=[]; }; emil = derive2 { name="emil"; version="2.2.8"; sha256="02xjf8ipqr136y3pa375lwpg6h63yvbphhghs9jjxfl2r4fdkvcn"; depends=[data_table dplyr ggplot2 lazyeval magrittr Rcpp tidyr]; }; emma = derive2 { name="emma"; version="0.1-0"; sha256="0psd8lrbcqla8mkhp0wlassaaimgwlmqy5yv2wwcq59mc5k1v27f"; depends=[clusterSim earth]; }; emme2 = derive2 { name="emme2"; version="0.9"; sha256="035s4h95ychqb14wib0dqbg4sjy9q01fsryr0ri25g1hsi5f8lpm"; depends=[reshape]; }; - emmeans = derive2 { name="emmeans"; version="1.1.2"; sha256="12gkg2r7g1n481mvry354az5gzqji7rsl43jrmvq504sqyg4z41n"; depends=[coda estimability ggplot2 multcomp mvtnorm nlme plyr xtable]; }; + emmeans = derive2 { name="emmeans"; version="1.1.3"; sha256="150kgc5ymssmcf240js4jrbhm32xn4bayrzbxry12mh1lcr9kvf2"; depends=[coda estimability ggplot2 multcomp mvtnorm nlme plyr xtable]; }; emoa = derive2 { name="emoa"; version="0.5-0"; sha256="1wcnsnkdmpcn21dyql5dmj728n794bmfr6g9hgh9apzbhn4cri8p"; depends=[]; }; emojifont = derive2 { name="emojifont"; version="0.5.1"; sha256="0i4id9631ah5vzkzh6zfxgk55b2ppnbgabp1w2ivy29i0nji9wk4"; depends=[ggplot2 proto showtext sysfonts]; }; emon = derive2 { name="emon"; version="1.3.2"; sha256="19khjjpyxvzhzihqq15w02l5v5ryyvxlklz1ch2gkmqcpnvyga32"; depends=[MASS mgcv]; }; @@ -5936,11 +6047,11 @@ in with self; { emplik = derive2 { name="emplik"; version="1.0-3"; sha256="0b52383m2djdcg9b1a7r10k5pkzljz6dalvbg2gg962ckvpndb11"; depends=[quantreg]; }; emplik2 = derive2 { name="emplik2"; version="1.20"; sha256="0qdsfmnvds01qa4f112knv905k0fzccrqj9fwaqrqcy48cigm8pd"; depends=[]; }; ems = derive2 { name="ems"; version="1.0.0"; sha256="1x6zsrf15xn865v8awbnq1cpaqp5j2k1pmis5a8mjnw568xi0hhw"; depends=[]; }; - emuR = derive2 { name="emuR"; version="0.2.3"; sha256="04nxrg95qgwc5ss139bgjcsxkarwzkxy132dz0vk3sq7sddnagws"; depends=[base64enc data_table DBI dplyr httpuv jsonlite MASS RCurl RSQLite stringr uuid wrassp]; }; + emuR = derive2 { name="emuR"; version="1.0.0"; sha256="19740da4m22v9ys1z8q80khf71fjbaisn1f6whgal7p3cinvkcr3"; depends=[base64enc compare DBI dplyr httpuv jsonlite MASS purrr RCurl readr RSQLite shiny stringr tibble uuid wrassp]; }; emulator = derive2 { name="emulator"; version="1.2-15"; sha256="1rp7q7zs8b49jzdkbzm4s1g8554h41hcabf4d78k9jhhys2z28g2"; depends=[mvtnorm]; }; enaR = derive2 { name="enaR"; version="3.0.0"; sha256="0sy7k8l6b8p34bcf9bpjr1y6qkjkvn77y2w2ws7ivcr1fynrhm5p"; depends=[gdata limSolve MASS network sna stringr]; }; enc = derive2 { name="enc"; version="0.2.0"; sha256="0n4s3abxmpndppm18dcibap2n22xpjzafn5xjskfdfrz3wjfy1kb"; depends=[]; }; - encode = derive2 { name="encode"; version="0.3.3"; sha256="01jippva8gfbg3bq6g1sz8mpmglywg4mkb4k44bfspiv60bmv98f"; depends=[]; }; + encode = derive2 { name="encode"; version="0.3.4"; sha256="1ibrxa0lzni8c1nm3x061vj55faz8fvfgbl7c7b2wfanh5qnny9j"; depends=[]; }; endogMNP = derive2 { name="endogMNP"; version="0.2-1"; sha256="0maxcp321ngbxrg0i23nlwhj849v771xahh53367x928ss4f8v7i"; depends=[]; }; endogenous = derive2 { name="endogenous"; version="1.0"; sha256="079fmfxl9gf080zq5m1ixmgry9dawg2y6ixbfyc5da5jxf3zk9h8"; depends=[mvtnorm]; }; endorse = derive2 { name="endorse"; version="1.6.0"; sha256="1j75sb2di2c092dilbjj5qsvb52h3zmm7wxflf9kg7xw227wq3zw"; depends=[coda]; }; @@ -5956,18 +6067,18 @@ in with self; { enrichwith = derive2 { name="enrichwith"; version="0.1"; sha256="10x7p0s96hkalnnnwx2gczywblqxig9p4pllzk1ciyjjfidsc9va"; depends=[]; }; ensembleBMA = derive2 { name="ensembleBMA"; version="5.1.5"; sha256="0p744151pbj278lyc8d8p7rc20n70abpfgxz6jr10jarmq3r6x7l"; depends=[chron]; }; ensembleEN = derive2 { name="ensembleEN"; version="1.1.2"; sha256="033i4bcnr62kmrp1fafdw6vx8ir38kqchgxp4fidg3i750nkjnda"; depends=[Rcpp RcppArmadillo]; }; - ensembleMOS = derive2 { name="ensembleMOS"; version="0.8.1"; sha256="1xbk3m4b619wni64i7wrccgp7gwaql2g6lg42lqwbsscdr3j0cls"; depends=[chron ensembleBMA evd]; }; + ensembleMOS = derive2 { name="ensembleMOS"; version="0.8.2"; sha256="16d8030zfdwifqrh45vz3gf5n0bix0mhsmsnydgjq1fghdklcmyx"; depends=[chron ensembleBMA evd]; }; ensembleR = derive2 { name="ensembleR"; version="0.1.0"; sha256="0xvq1jlsp7gsk46i847nfvadxwlh09gi2rgwss2wf2xmh1855ray"; depends=[caret]; }; ensemblepp = derive2 { name="ensemblepp"; version="0.1-0"; sha256="1b3rhg8mv1x3caz3xg84cwx8m88055n6yl36d9i4ws6vbj8vx68f"; depends=[]; }; ensurer = derive2 { name="ensurer"; version="1.1"; sha256="1gbbni73ayzcmzhxb88pz6xx418lqjbp37sdkggbrxcyhsxpdkid"; depends=[]; }; entropart = derive2 { name="entropart"; version="1.5-3"; sha256="02jzcqb7sqg9fcf2vi4myki9mgdsx0jwyf535zzh124h1bwz3f3y"; depends=[ade4 ape EntropyEstimation geiger vegan]; }; entropy = derive2 { name="entropy"; version="1.2.1"; sha256="10vg4818q5g54pv2nn9x5i7pvky5nsv96syy47pz2mgqp1273cpd"; depends=[]; }; envDocument = derive2 { name="envDocument"; version="2.4.0"; sha256="0r7h9p0b0gr2l18mv1ydlamsc0iq474dfhp450mdfnw2q289mhrn"; depends=[]; }; - enveomics_R = derive2 { name="enveomics.R"; version="1.2.0"; sha256="0bbm16k2i9lwm662hsglv3a5mf367bgxh25c87cvvfxafrbd67wj"; depends=[fitdistrplus investr modeest sn]; }; + enveomics_R = derive2 { name="enveomics.R"; version="1.3"; sha256="1m97lmgf42ifzafz91g69nnf4q918464xir9cqjjn6ch5i7lvi65"; depends=[fitdistrplus investr modeest sn]; }; enviGCMS = derive2 { name="enviGCMS"; version="0.3.4"; sha256="1wjf1rxwzd590qsyljw1pd59kppx91m32p6nkdy4yvbnv39rk8dq"; depends=[BiocParallel genefilter limma mixtools qvalue rcdk RColorBrewer sva xcms]; }; enviPat = derive2 { name="enviPat"; version="2.2"; sha256="1cf1h4v05riivjwil4167sncdxzgxf3r4snx1imjb6s4msx67ibi"; depends=[]; }; enviPick = derive2 { name="enviPick"; version="1.5"; sha256="04q6zwqq2ip8b8h2n1jpgx1bzcvi7lazljs0806wiakbc79x232p"; depends=[readMzXmlData shiny]; }; - envirem = derive2 { name="envirem"; version="1.1"; sha256="07mlyaqjwwrh9dbc78ik61wrrpg344fg3rb12l6v6hzn04yp26pz"; depends=[raster RSAGA]; }; + envirem = derive2 { name="envirem"; version="1.3"; sha256="1axgbjl4wh44vd5r9n9rbxxsi35k806r1kdvrcmmpkzwam6zd2lp"; depends=[raster RSAGA]; }; envlpaster = derive2 { name="envlpaster"; version="0.1-2"; sha256="11a5n40k1ln5gxxvwq1vh4dhmhifhlm89hkhf36qnhj4bjh3v3y0"; depends=[aster aster2 caTools MASS]; }; epade = derive2 { name="epade"; version="0.3.8"; sha256="1alvsifc6i71ilm1xxs1d7sqlapb48bqd6z2n4wi6pqcjvwp7bif"; depends=[plotrix]; }; epandist = derive2 { name="epandist"; version="1.1.1"; sha256="0hxgbjns5bk82rgcmykxifnnxcnqdzmkimkkmpdif64zr5g3gjdg"; depends=[]; }; @@ -5977,7 +6088,7 @@ in with self; { epiR = derive2 { name="epiR"; version="0.9-93"; sha256="1i0vi1dx5pjq4rcw8r9g7qkhrn4ra8lffrspzkrrjj12y97izmrg"; depends=[BiasedUrn survival]; }; epibasix = derive2 { name="epibasix"; version="1.3"; sha256="0d0087sa8lqw35pn7gdg2qqzw3dvz57sgavymwl1ybcj5d4lsbyk"; depends=[]; }; epicontacts = derive2 { name="epicontacts"; version="1.1.0"; sha256="0f4a1y311z3fxw7ygj6fgsq6d2qn0ivxsjlh742pkmg3jb63s0f3"; depends=[colorspace dplyr igraph magrittr threejs visNetwork]; }; - epidata = derive2 { name="epidata"; version="0.1.0"; sha256="1lp6hnjzga787abq94k8v48wlikpp5hj1xwmxc8nj1imyr4r8a4h"; depends=[dplyr httr jsonlite purrr readr rvest stringi tidyr xml2]; }; + epidata = derive2 { name="epidata"; version="0.2.0"; sha256="0n0100fy65kgw3c7gdmb5z5hmla5ch51b7872snf525a2r581i28"; depends=[dplyr httr jsonlite purrr readr rvest stringi tidyr xml2]; }; epifit = derive2 { name="epifit"; version="0.1.2"; sha256="1i1ngb5kh03gyx1702fwav3dc3mqry1wjzc7ry36hdw0ngawid34"; depends=[MASS]; }; epinet = derive2 { name="epinet"; version="2.1.8"; sha256="10bgq66n99kkz0nhmsz508aypxk57zk19p5l3xrb28n72k4rfgrf"; depends=[network]; }; episensr = derive2 { name="episensr"; version="0.9.2"; sha256="1w1228q8q2ysi3xi3m8a9z0c7japj97dssjkzpjcrng094cy82is"; depends=[actuar boot ggplot2 gridExtra llogistic logitnorm plyr reshape trapezoid triangle]; }; @@ -5986,10 +6097,9 @@ in with self; { episplineDensity = derive2 { name="episplineDensity"; version="0.0-1"; sha256="0nmh97xajnnh54i04yq8fdici4n5xvcbpdbjdbz79483gnils4vn"; depends=[nloptr pracma]; }; epistasis = derive2 { name="epistasis"; version="0.0.1-1"; sha256="0dfh26bs72i01hpxpgpgyiwpmg9mjpib8zynhc5ssxa0skm518wz"; depends=[glasso igraph Matrix tmvtnorm]; }; epitab = derive2 { name="epitab"; version="0.2.1"; sha256="0q8fxxx7ddzaj8dxxlsh1a2gxf6byw5041mr7abac9yjjga2kz97"; depends=[kableExtra knitr MASS survival xml2]; }; - epitable = derive2 { name="epitable"; version="0.1.2"; sha256="1g0ab5bah7v52mzsyfxdv8azmpz66pipbc15q3vpvvhl3gjhsaik"; depends=[broom dplyr htmlTable magrittr purrr readr rlang stringr survival tidyr tidyverse]; }; epitools = derive2 { name="epitools"; version="0.5-10"; sha256="1qqa2kam3j3mkbgk62g6lwygk2fkdlrpbi27wl37j4dkdkvx013m"; depends=[]; }; epitrix = derive2 { name="epitrix"; version="0.1.2"; sha256="1fnmcpjbbk645s7q2jcccjv0q20z8hlzr8sl0jh6d00jrgk8qif4"; depends=[digest distcrete stringi]; }; - eply = derive2 { name="eply"; version="0.1.0"; sha256="18q40n06gbqg5cs0jknlxk5x0pwcbjnfb27ysmbf76s826qdc8gh"; depends=[magrittr]; }; + eply = derive2 { name="eply"; version="0.1.2"; sha256="0al44pvqf6ls3dh129vlv3g56hk1nbql09rj0qsb04d9kaz9anrp"; depends=[magrittr]; }; epoc = derive2 { name="epoc"; version="0.2.5-1"; sha256="1r19cvcqf39yf09n3znbdy3dsr7z96yx6zib6031mqqdsxaav5qd"; depends=[elasticnet graph irr lassoshooting Matrix Rgraphviz survival]; }; epr = derive2 { name="epr"; version="3.0"; sha256="0czfz6qkcpa2qqs3pqii27hgpdvdzfrvxl0ip67v58hamq7kvjfv"; depends=[car lme4]; }; epxToR = derive2 { name="epxToR"; version="0.3-0"; sha256="0ckz7cvqsdilfkqap88brh4av9zv1fl3ijs4h4vlwwn7qvdcnhay"; depends=[httr XML]; }; @@ -5997,7 +6107,7 @@ in with self; { eqtl = derive2 { name="eqtl"; version="1.1-7"; sha256="0xfr8344irhzyxs9flnqn4avk3iv1scqhzac5c2ppmzqhb398azr"; depends=[qtl]; }; equSA = derive2 { name="equSA"; version="1.1.5"; sha256="0sknx2p820i26m1d0ypz4ay5rm4j9i97nvcd3wxawqk72ypvbvw1"; depends=[huge igraph mvtnorm speedglm XMRF ZIM]; }; equaltestMI = derive2 { name="equaltestMI"; version="0.1.0"; sha256="1zqhgx1x6lqjwqisl3ydb6yqp3jn6x7dgnc57r93v73sjx2j5aiz"; depends=[lavaan]; }; - equate = derive2 { name="equate"; version="2.0.6"; sha256="0fkgz4747wf2n1sfkskpbp20zdmxvykqhncr7a8wl5lp314r48x3"; depends=[]; }; + equate = derive2 { name="equate"; version="2.0.7"; sha256="07cji0z139fk70d4wvrpk5m34fq1pfnqrsw336lgnp5a7zp3jz7n"; depends=[]; }; equateIRT = derive2 { name="equateIRT"; version="2.0-4"; sha256="0j5dpgp4r5qisgw65yk7x9nwq7wxfppp0n0qqg734gqwjyfyp68b"; depends=[mirt statmod]; }; equateMultiple = derive2 { name="equateMultiple"; version="0.0.0"; sha256="0q29bv8bb0c3sprhnkbbpn31phw37dwgk23v5ny4abzvlcgwncdb"; depends=[equateIRT numDeriv Rcpp RcppArmadillo statmod]; }; equivalence = derive2 { name="equivalence"; version="0.7.2"; sha256="170l5gnk0dkjkfsx7qyrw56ircwsjzz9cvhakgyrqh7bj5734i79"; depends=[boot lattice PairedData]; }; @@ -6017,24 +6127,26 @@ in with self; { errint = derive2 { name="errint"; version="1.0"; sha256="1ya7fsvwhmgxw87r32m4345n8pw2pbpv026xvml03s1kiam8qwbw"; depends=[rootSolve VGAM]; }; errorist = derive2 { name="errorist"; version="0.0.1"; sha256="1569yvncc9rdzchs7cvx44dhy8xf10g2hwkiy3kp68h47qghxlbd"; depends=[searcher]; }; errorizer = derive2 { name="errorizer"; version="0.2.1"; sha256="10p7ydm81x2gls0wn692llgj2rxhg4s96rv7gvihmgi5dflraypq"; depends=[]; }; - errorlocate = derive2 { name="errorlocate"; version="0.1.2"; sha256="1qlwdvy7i62hpnfrryzmqwmygxa8mjc7q92g6k5n9r2r179q7h09"; depends=[lpSolveAPI validate]; }; - errors = derive2 { name="errors"; version="0.2.0"; sha256="0l7yxshfc2ig7354r3vk35fsx2vyj09w7abwxakic93grvr09a71"; depends=[]; }; + errorlocate = derive2 { name="errorlocate"; version="0.1.3"; sha256="0hfm0nad1bfh7a37zpn4aljrf69yc6dddz9iq46c1mzyrw116a9f"; depends=[lpSolveAPI validate]; }; + errors = derive2 { name="errors"; version="0.2.1"; sha256="1hf7nqyhyv0n4qn5bzs1gb59fbn6vsiji0va8hpzzw3af0h3dqzy"; depends=[]; }; esaBcv = derive2 { name="esaBcv"; version="1.2.1"; sha256="0hgjcdbiy1a71vsb2vcyp0xmhy6wi4nlh1sqsfb2vxckc95i9i21"; depends=[corpcor svd]; }; esaddle = derive2 { name="esaddle"; version="0.0.3"; sha256="04imppwls6a485kdfwykk4s0pyxas3i92ccghi780ys29y0nggmy"; depends=[doParallel mvnfast plyr Rcpp RcppArmadillo]; }; + esaps = derive2 { name="esaps"; version="0.1.0"; sha256="1rchs4i7n221gyhj9kbka4zmi2lf72q3ak2pdxkr7w6pcx6803yz"; depends=[plyr readODS readxl]; }; esc = derive2 { name="esc"; version="0.4.0"; sha256="07mgf1kdz6gjkmbsis24gjsppclaxlf7b03jpvasm1k4snfvgb5h"; depends=[dplyr purrr readr sjmisc tibble]; }; eshrink = derive2 { name="eshrink"; version="0.1.0"; sha256="0s1jl652za7qwv70kmc1h3vbwlijl49527pwpm0z347lz2jdcigj"; depends=[glmnet MASS]; }; esmisc = derive2 { name="esmisc"; version="0.0.3"; sha256="1d6xrdxwn85c8s60s7vzaymh7wa9f7fzd79hq5spzd12fr3zisvj"; depends=[ggplot2 raster readr]; }; - esmprep = derive2 { name="esmprep"; version="0.1.3"; sha256="0s5ij63v3v9hx1xnl8ygbnxbgik65yd8xn3irpbvc41mp9spgcdz"; depends=[lubridate]; }; + esmprep = derive2 { name="esmprep"; version="0.1.4"; sha256="1d1rr11fldxsamn19za03sdyvvybkh3bm5zvlrlkz022jj7pgxlr"; depends=[lubridate]; }; esreg = derive2 { name="esreg"; version="0.3.1"; sha256="19ikfy0g8yd224ah4gyq2k29lz3gagc6vrcv53awvdadqw0cpz8l"; depends=[quantreg Rcpp RcppArmadillo]; }; ess = derive2 { name="ess"; version="0.1.1"; sha256="1i94sfg8r9mnzcmyddq3zb56gwkgqdclyx90a5plpyy5insk13d7"; depends=[haven httr rvest stringr tibble xml2]; }; - essHist = derive2 { name="essHist"; version="1.0.1"; sha256="0xnf5cxc7x3chs508am9qhnavz89fim10ffkn8mp1b29jdw88aax"; depends=[Rcpp]; }; + essHist = derive2 { name="essHist"; version="1.1.1"; sha256="06wmvwjgbb1bfsjn4bv3p2m0i5nc6shn2p62kjp3iv6z42f5wndc"; depends=[Rcpp]; }; + essurvey = derive2 { name="essurvey"; version="1.0.0"; sha256="0wgwqm59wam5sjzn3cjh3fzbq14bfa02gjsszwg2hid1q976clqk"; depends=[haven httr rvest stringr tibble xml2]; }; estatapi = derive2 { name="estatapi"; version="0.3.0"; sha256="0gjc5x1b2l5qnwdg77nzy6d7bf9q93ll39sfy89izqm8wsydwwkp"; depends=[dplyr httr purrr readr]; }; estimability = derive2 { name="estimability"; version="1.3"; sha256="0cifdaa71spkcxl4db4z884jrya865sg3dhcv4isd8fnzg2pjcd3"; depends=[]; }; - estimatr = derive2 { name="estimatr"; version="0.4.0"; sha256="19k8b4rglz4b7r12x8da6wzrkd0j40dp1zxzdwj6pfw3fhpacl2i"; depends=[Rcpp RcppEigen]; }; + estimatr = derive2 { name="estimatr"; version="0.6.0"; sha256="0763wq8y166zwdxf2wqxvbqwps9di7i7877pffs478qr4rx24z5g"; depends=[Formula Rcpp RcppEigen rlang]; }; estout = derive2 { name="estout"; version="1.2"; sha256="0whrwlh4kzyip45s4zifj64mgsbnrllpvphs6i5csb7hi3mdb3i5"; depends=[]; }; estprod = derive2 { name="estprod"; version="0.0.1"; sha256="0nd2iz1gqinvppyxgxsdh9m26v46h2ra3cc4nqz6dqnqkslzrl4k"; depends=[boot Formula lazyeval minpack_lm]; }; estudy2 = derive2 { name="estudy2"; version="0.8.4"; sha256="190wxdy1qsf8fgpbp2cr0blwa97vgmdw83pmfk9i44zkpm4nrij1"; depends=[matrixStats Rcpp tseries zoo]; }; - esvis = derive2 { name="esvis"; version="0.1.0"; sha256="19avayz2igw8sjc2743a9c3ikyrf18d42czadd98gdn8ny53vr6b"; depends=[sfsmisc]; }; + esvis = derive2 { name="esvis"; version="0.2.0"; sha256="0l4c87l9n94q14hwky7d7i4h9c5zh8r04zlcz9w4mx7ixfd34zir"; depends=[sfsmisc]; }; etable = derive2 { name="etable"; version="1.2.0"; sha256="17xahaf2fz1qgqjaw8qbnss95il6g47m3w00yqc5nkvv37gs0q7c"; depends=[Hmisc xtable]; }; etasFLP = derive2 { name="etasFLP"; version="1.4.0"; sha256="04d526yajakzivlcsz8631p0j482cbbgfpdmzkc9zr1m4495xxif"; depends=[fields mapdata maps rgl]; }; ether = derive2 { name="ether"; version="0.1.4"; sha256="1q6qxda5iw8zj7gy9h35apij5mbndd969ddip7zn5d720131kqra"; depends=[dplyr httr jsonlite Rmpfr]; }; @@ -6050,20 +6162,20 @@ in with self; { eurostat = derive2 { name="eurostat"; version="3.1.5"; sha256="128rlkkxdpl95wjxnrw8yzxpc6sml0vaghnaz0ra90ak1s43ndda"; depends=[classInt httr jsonlite RColorBrewer readr sp stringi stringr tibble tidyr]; }; eva = derive2 { name="eva"; version="0.2.4"; sha256="03jsiz6bkavwxpgllxaw8czahmm2rh5h8hhk5j7i9clcjx244vvj"; depends=[EnvStats Matrix]; }; evaluate = derive2 { name="evaluate"; version="0.10.1"; sha256="070vvmnbdlp7sz2zhza7fhd2a6mlwiln8fn4hyzhsiizbn4n79y9"; depends=[stringr]; }; - evaluator = derive2 { name="evaluator"; version="0.1.1"; sha256="19ria8y1bc8cvn1sb28p5zbkgs73m20i4c9v26byhd0rn9gjpm2f"; depends=[dplyr extrafont ggplot2 mc2d purrr purrrlyr readr readxl scales stringi tibble tidyr viridis]; }; + evaluator = derive2 { name="evaluator"; version="0.2.3"; sha256="1qlrrd68j622i2n0wazz3m44sc2l7hsg7fd1mc204c7pmfb6a3pl"; depends=[dplyr extrafont ggplot2 mc2d purrr readr readxl rlang scales stringi tibble tidyr viridis]; }; evclass = derive2 { name="evclass"; version="1.1.1"; sha256="00lbhcgswpv0amz0mb93kx9p91sf0d7zvxfw9i8x1zpmpfd6nhcj"; depends=[FNN]; }; evclust = derive2 { name="evclust"; version="1.0.3"; sha256="0cd0a8w0ixd9ilcqlxiaql4l2r49qrqnllb9qpg3xgnlxka3yb5m"; depends=[FNN limSolve Matrix R_utils]; }; evd = derive2 { name="evd"; version="2.3-2"; sha256="0n81plbw2p83c10y6a6hvqkxcbfqjdc41p02zyklbcafga1m4gdy"; depends=[]; }; evdbayes = derive2 { name="evdbayes"; version="1.1-1"; sha256="0lfjfkvswnw3mqcjsamxnl8hpvz08rba05xcg0r47h5vkgpw5lgd"; depends=[]; }; event = derive2 { name="event"; version="1.1.0"; sha256="1nq34bz9dsixidym3n255vmap3gjx9nfk8pc5s7w026faf96dr2v"; depends=[rmutil]; }; eventInterval = derive2 { name="eventInterval"; version="1.3"; sha256="0nybzy2mpmazcvz06mkv7l9741mjm3i2q2sindq0777vb2k4504v"; depends=[MASS]; }; - eventdataR = derive2 { name="eventdataR"; version="0.1.2"; sha256="0f0w5cir3hc01ag9l69y27cfp6bgh1ikk4n99z7pb16373ficjjw"; depends=[]; }; + eventdataR = derive2 { name="eventdataR"; version="0.2.0"; sha256="11apbbj68x1kxpwvihf4ng7wxy54jl1aw7r9hyq6gn7h8sk6lpjn"; depends=[]; }; events = derive2 { name="events"; version="0.5"; sha256="1zka4ygymifs8snd7cabl11b5lg3f8g8370dkm9ybl40bn8vvqq2"; depends=[]; }; eventstudies = derive2 { name="eventstudies"; version="1.2"; sha256="0z449j7yrd6j6hhacz6f048ibilib6m97684cz2wc4pqq2wlj8hg"; depends=[boot sandwich testthat xts zoo]; }; - evidence = derive2 { name="evidence"; version="0.8.8"; sha256="1bfdwl41yqvhc3jg0xddwaw7h0s7qa4xfz2i94jh6wa247r51gwf"; depends=[LaplacesDemon lattice LearnBayes loo rstan rstanarm]; }; + evidence = derive2 { name="evidence"; version="0.8.9"; sha256="173fjmpizjmrp0qh08k2qllvjm4l53ykblfri984x9kh68aqfvnz"; depends=[LaplacesDemon lattice LearnBayes loo rstan rstanarm]; }; evidenceFactors = derive2 { name="evidenceFactors"; version="1.00"; sha256="12wndimbygn7h57f3q0xmxmvqrcdj98f0a58m22z2l0vmym53rhb"; depends=[sensitivitymv]; }; - evir = derive2 { name="evir"; version="1.7-3"; sha256="1kn139vvzdrx5r9jayjb4b0803b0bbppxk68z00gdb50mxgvi593"; depends=[]; }; - evmix = derive2 { name="evmix"; version="2.9"; sha256="1w1mm858515hnjpq2yjj0x05skyprhnvbpyif4mdcm24blyb81di"; depends=[gsl MASS SparseM]; }; + evir = derive2 { name="evir"; version="1.7-4"; sha256="1h7a7z7v5k33y5hsdfczsri3vpbwspfgazhv4saknv2h11rgfpki"; depends=[]; }; + evmix = derive2 { name="evmix"; version="2.10"; sha256="0q2jcd4r9ndl8c8w4g75cv5g9f58ix6ndwa99lgslw2j0ckh0z97"; depends=[gsl MASS SparseM]; }; evobiR = derive2 { name="evobiR"; version="1.1"; sha256="0502xj1gv2g943vfqyllz4sr5z4mixf5vqlqi2v96mymnv9iwsr8"; depends=[ape geiger phytools seqinr shiny]; }; evolqg = derive2 { name="evolqg"; version="0.2-5"; sha256="11n0gxkxhg1d2ziwbipqvyccgnsrzm3mk4xy2d7nxn662q1yl2ah"; depends=[ape coda expm ggplot2 igraph Matrix matrixcalc MCMCpack mvtnorm plyr Rcpp RcppArmadillo reshape2 vegan]; }; evolvability = derive2 { name="evolvability"; version="1.1.0"; sha256="0lbyidb86yzvcfw86jfwnzbpijn64jr8fasycqq4h3r9c0x2by3j"; depends=[coda]; }; @@ -6080,13 +6192,13 @@ in with self; { exampletestr = derive2 { name="exampletestr"; version="1.2.0"; sha256="05p819a6s6anxjqvs10df9kcfdg7lkg1205iw635db9g6biplrb7"; depends=[checkmate devtools filesstrings magrittr purrr readr roxygen2 stringr styler]; }; exams = derive2 { name="exams"; version="2.3-0"; sha256="0y21cx6knx253gka1bib8z0jmyndl4k7c2d8hfh3rwn5bdqyqj53"; depends=[]; }; excerptr = derive2 { name="excerptr"; version="1.4.0"; sha256="0z69lqfdm2dh9z6rqhfnj6f4b2p6sgmlvcxasg49wd0qasx86ph6"; depends=[git2r rprojroot rPython]; }; - excursions = derive2 { name="excursions"; version="2.3.2"; sha256="1fh04kkv9nj7wxrklpapsfh0xi8k5hfaa1f4dvnz2wxvzz3iz5nb"; depends=[Matrix sp]; }; + excursions = derive2 { name="excursions"; version="2.3.3"; sha256="16clwp76hq1q3m7ixjq1rv83vagxyj2fcs4jdsgvl9pzh5syzd3x"; depends=[Matrix sp]; }; exif = derive2 { name="exif"; version="0.1.0"; sha256="12phqn5x1x0xs2xczl3064q983dalm261vqpyafhdcndm1y3gwbc"; depends=[Rcpp]; }; exifr = derive2 { name="exifr"; version="0.2.1"; sha256="0969ip7vwhs3r9zwy5l1gqg886yl4gfw8ss2frnq9nmqpn1ib1v2"; depends=[curl dplyr jsonlite purrr tibble]; }; exp2flux = derive2 { name="exp2flux"; version="0.1"; sha256="1b3ychb4wcf6dbccx2ddms5xygdgc296cnw4474fm81yrfjznplv"; depends=[gage igraph sybil]; }; expandFunctions = derive2 { name="expandFunctions"; version="0.1.0"; sha256="0661l4ab0xhjidmh8ycvymhp3wgxafm7nd1c59bfpxhyhz76n1p4"; depends=[glmnet orthopolynom plyr polynom]; }; - expands = derive2 { name="expands"; version="2.1.0"; sha256="0870jbjk2yzddvs57fdnl4psy55r6rjdbs7w7jc7s3vrzdsziwxa"; depends=[ape commonsMath flexclust flexmix gplots matlab moments NbClust plyr RColorBrewer rJava]; }; - experiment = derive2 { name="experiment"; version="1.1-2"; sha256="1wswfxfk3b5gvdxb6i3mzx66i1qszvb9alfwhv95y0dr5q6vss1w"; depends=[boot MASS]; }; + expands = derive2 { name="expands"; version="2.1.1"; sha256="1ajfj5vsqal642avshjfmv0f5vi0ca3whhw5cxmpm013yckb3b3r"; depends=[ape commonsMath flexclust flexmix gplots matlab moments NbClust plyr RColorBrewer rJava]; }; + experiment = derive2 { name="experiment"; version="1.1-3"; sha256="0gxf6bbx06ynz96mwcb9wdb8pb0njvjnpigjc1vq5ammc3l6dkxz"; depends=[boot MASS]; }; expert = derive2 { name="expert"; version="1.0-0"; sha256="0y9vcigvzhymalpv31b9nvmr86z1dz7x29yj838vks0dsv23rgrf"; depends=[]; }; expint = derive2 { name="expint"; version="0.1-4"; sha256="17vp7znbxlf5zb944snmnml2w42avj9k70fisb8az047i3kdbvfh"; depends=[]; }; explor = derive2 { name="explor"; version="0.3.3"; sha256="1b3swb7ikp2ik3300ljg2rll5gka4l4lfg95bqbgap3ph4dclv7y"; depends=[dplyr DT ggplot2 highr scatterD3 shiny tidyr]; }; @@ -6151,13 +6263,13 @@ in with self; { fTrading = derive2 { name="fTrading"; version="3042.79"; sha256="0xnfg4npfdrvmp1n6vbsm7if16n5j83b7y1i2m5b34cqnlz9d69y"; depends=[fBasics timeDate timeSeries]; }; fUnitRoots = derive2 { name="fUnitRoots"; version="3042.79"; sha256="1hsv47dm0hx3s04g9h0bjdgi79zbfihnfxxdc2jskqp94yl7azsy"; depends=[fBasics timeDate timeSeries urca]; }; fabCI = derive2 { name="fabCI"; version="0.1"; sha256="123bc56nnx6hcj257imsd8sc6d0pggw08lf4m0lr90631gcm1mkn"; depends=[]; }; - fabricatr = derive2 { name="fabricatr"; version="0.2.0"; sha256="1jgfxifp7v80bddcs5zi5zidzhnzmsbvfa7qznaxyp3qknax2k67"; depends=[rlang]; }; + fabricatr = derive2 { name="fabricatr"; version="0.4.0"; sha256="0z04n2n44anpci8m4m5hs83nwhiczil7lkg8glcgngrdh994k8hc"; depends=[rlang]; }; face = derive2 { name="face"; version="0.1-4"; sha256="0kkgblxzhjzifxnym6g5psiwvfgydk1scqbxraldklm8c4a12zc3"; depends=[Matrix matrixcalc mgcv refund]; }; facebook_S4 = derive2 { name="facebook.S4"; version="1.1.0"; sha256="1if3fgyvj6pbf48yjwa5fkn3s4rl6kj9s1nk6dwphykhx72ghzrj"; depends=[httr magrittr plyr rjson]; }; facilitation = derive2 { name="facilitation"; version="0.5.2"; sha256="0gyqa3njyynvdhfziq33xqc7cjhszii67mk8809ncvh6abkdx1hw"; depends=[animation Matrix Rcpp]; }; factoextra = derive2 { name="factoextra"; version="1.0.5"; sha256="1l6m8k7qhdw8ndar8nhmym0lfyd1i2iszl1cicjax0vq23ss6xw1"; depends=[abind cluster dendextend FactoMineR ggplot2 ggpubr ggrepel reshape2 tidyr]; }; factoptd = derive2 { name="factoptd"; version="1.0.3"; sha256="1ir50im3kr1xhqk4qwrm2h5fq9gqgrwshbamvjlf8n1wnn03mcb6"; depends=[MASS partitions]; }; - factorMerger = derive2 { name="factorMerger"; version="0.3.5"; sha256="0j5bjn8jmmdxr88aiw3i46frphkn4s5a54iqz6hcqq70cgg91cj4"; depends=[agricolae colorRamps dplyr forcats formula_tools ggplot2 ggpubr knitr magrittr MASS mvtnorm proxy reshape2 scales survival]; }; + factorMerger = derive2 { name="factorMerger"; version="0.3.6"; sha256="04l52w2lfihmwqk4xbv2i37jgkanhvmzcw2x7dmj3hmjymlr4yl0"; depends=[agricolae colorRamps dplyr forcats formula_tools ggplot2 ggpubr knitr magrittr MASS mvtnorm proxy reshape2 scales survival]; }; factorQR = derive2 { name="factorQR"; version="0.1-4"; sha256="1vl01fm5qfyhnqbl5y86vkr50b8cv07vzlqs3v6smqaqq6yp4lv4"; depends=[lattice]; }; factorcpt = derive2 { name="factorcpt"; version="0.1.2"; sha256="17hwlsrj0fx4x05p6xvs6kl43a24icmnrzyvpf2vam5imwvmpvmm"; depends=[doParallel fields foreach iterators Rcpp RcppArmadillo]; }; factorplot = derive2 { name="factorplot"; version="1.1-2"; sha256="025lfk122w66yxym3njcpzwnbhg40xi7p1c9vnxczcb8kz31745s"; depends=[multcomp nnet]; }; @@ -6176,6 +6288,7 @@ in with self; { fancycut = derive2 { name="fancycut"; version="0.1.1"; sha256="1vnxn5zl1j8209dyrwq3919hivab09f0jq4v9h7v0wlqk1hy5ich"; depends=[]; }; fanovaGraph = derive2 { name="fanovaGraph"; version="1.4.8"; sha256="1da7yskh2gn4arrrnalkl3izqyyrm0yf0il4v2izs7di7qlw3m6v"; depends=[DiceKriging igraph sensitivity]; }; fanplot = derive2 { name="fanplot"; version="3.4.1"; sha256="1xj1hdz3i9c9wdx7ryiqag69khh3544v4474ilxxiyahxg2r6m45"; depends=[]; }; + fansi = derive2 { name="fansi"; version="0.2.2"; sha256="1kjbklr24n649k17mgcxsrw8lsj4c2yd94yg1rilsnlqcyjdvpvi"; depends=[]; }; faoutlier = derive2 { name="faoutlier"; version="0.7.2"; sha256="0h2azbkxpz03qjmq558mh7dkpv87vbvminvg69wqsx21m6hdl5r3"; depends=[lattice lavaan MASS mirt mvtnorm pbapply sem]; }; far = derive2 { name="far"; version="0.6-5"; sha256="18lj2mgnn9s59ypkr19zzv0sffwpx9mgk975xmpvw4kkl84dykis"; depends=[nlme]; }; faraway = derive2 { name="faraway"; version="1.0.7"; sha256="0lalf52y9rb4zdb4kpscwddb4zy0af7r5sm7lx8s9jaqykrwrfq6"; depends=[lme4 nlme]; }; @@ -6196,13 +6309,15 @@ in with self; { fastR2 = derive2 { name="fastR2"; version="0.2.0"; sha256="1xwa4v0j2n0qxn1prhc9x0sz53fhsfbg2m1a6kfdp7cpvvk46pw5"; depends=[dplyr ggformula ggplot2 lattice magrittr maxLik miscTools mosaic numDeriv]; }; fastSOM = derive2 { name="fastSOM"; version="1.0.0"; sha256="1x4kxys7mxlxz7cfbjig44za8m8p19xgzcs5y2wn9320sx8b0wc0"; depends=[]; }; fastTextR = derive2 { name="fastTextR"; version="1.0"; sha256="0l0f9jvsa68a3vd6mwbhsqd12729nd6nwsnlzrhsg9wj9rx8kpmi"; depends=[Rcpp]; }; + fasta = derive2 { name="fasta"; version="0.1.0"; sha256="0wnppxn3039dj58xm0b66fsyq537bk8k8m56im11xj1iwc3zc6vw"; depends=[]; }; fastclime = derive2 { name="fastclime"; version="1.4.1"; sha256="0zcir8r11b2hxr9vvkmvxlzmhfcaxbr0wbjy86ysr912mp8fs9i3"; depends=[igraph lattice MASS Matrix]; }; fastcluster = derive2 { name="fastcluster"; version="1.1.24"; sha256="15drhl22wm8whsy6b3vv754skfddiydb068zn1whrw5sknvkkjc2"; depends=[]; }; fastcmh = derive2 { name="fastcmh"; version="0.2.7"; sha256="0hib3r3pkfdi67bdy4pf1pw6869vq4b3pg1pq1zwpyy76nbnq9vl"; depends=[bindata Rcpp]; }; fastcox = derive2 { name="fastcox"; version="1.1.3"; sha256="0jn19v6mkwgyz8x63xrfgkgnf0f2rq338r5qkhz690mdzr4c47a3"; depends=[Matrix]; }; fastdigest = derive2 { name="fastdigest"; version="0.6-3"; sha256="02csl261v7nassi5119ygw6jglm8q6rssg7lgyxzj73mkyilm832"; depends=[]; }; fasteraster = derive2 { name="fasteraster"; version="1.1.1"; sha256="1ycr2h046jds2758xvxn00rhglx3zarbzn3r38j66j5pnz2iiq4f"; depends=[Rcpp]; }; - fastmaRching = derive2 { name="fastmaRching"; version="1.0.0"; sha256="17z5frf5c50y4387l4vbwwbm8z1wn0yyr7kp044s4q8bp1k2pqv3"; depends=[raster rgdal sp]; }; + fasterize = derive2 { name="fasterize"; version="1.0.0"; sha256="0q8n1r5n06yr6vmnwrdajx8923646bzm7ywgn2f0zxl214plf56s"; depends=[raster Rcpp RcppArmadillo sp]; }; + fastmaRching = derive2 { name="fastmaRching"; version="1.1.0"; sha256="085xr5i6h6vwl1flzbkwqsm8d815s0p02p0mir60jqjvy0s7haip"; depends=[raster rgdal sp]; }; fastmatch = derive2 { name="fastmatch"; version="1.1-0"; sha256="0z80jxkygmzn11sq0c2iz357s9bpki548lg926g85gldhfj1md90"; depends=[]; }; fastnet = derive2 { name="fastnet"; version="0.1.4"; sha256="0hc18yc2cmvb5v8vjj1xvnciz35hyfp9iyqhkg9jfjrlf89icny6"; depends=[doParallel foreach igraph tidygraph]; }; fastpseudo = derive2 { name="fastpseudo"; version="0.1"; sha256="0paag4pjh3gs270j663bsl65sfrq43gk2zzqmalr03fmcckp6aaj"; depends=[]; }; @@ -6214,15 +6329,16 @@ in with self; { favnums = derive2 { name="favnums"; version="1.0.0"; sha256="0siax7gjr25lpf1li3hawx6nviggs68c0lap2d9i38azlhvj891w"; depends=[]; }; fbRads = derive2 { name="fbRads"; version="0.2"; sha256="1a65gfvizzm6psspcvlhkxligdf9j1whrgzkg7ww520lk3z8lnnd"; depends=[bit64 data_table digest futile_logger jsonlite plyr RCurl]; }; fbRanks = derive2 { name="fbRanks"; version="2.0"; sha256="17kbmdpgqkj2n951c6mdsrgfga6kiij1gqiw1wpi0q3fq4dlfrzx"; depends=[igraph stringr]; }; - fbar = derive2 { name="fbar"; version="0.3.4"; sha256="0nsw7axdgmkbmn87wxg3adyy060vrqqbr0s2hfdh54fj58i6nq71"; depends=[assertthat dplyr magrittr Matrix purrr rlang ROI ROI_plugin_ecos stringr tibble tidyr]; }; + fbar = derive2 { name="fbar"; version="0.4.3"; sha256="1raq8ak01gcnmcsaa3fdfqi40d67v7nfjr212jzvq7wp2qk3j10i"; depends=[assertthat dplyr magrittr Matrix purrr rlang ROI ROI_plugin_ecos stringr tibble tidyr]; }; fbati = derive2 { name="fbati"; version="1.0-1.1"; sha256="18k8a1m2znzzwmm25dbqnqzwbjxqz4rbjaw3z9affky7lzqgbg6l"; depends=[fgui pbatR rootSolve]; }; fbroc = derive2 { name="fbroc"; version="0.4.0"; sha256="0bxi027iqqn50mn5nrlgx3z4qdlfkrq88s0dqyaxdl8rsrwp3d2w"; depends=[ggplot2 Rcpp]; }; fcd = derive2 { name="fcd"; version="0.1"; sha256="091wbf5iskcgyr7jv58wrf590qijb0qcpninmvm3xrwxi34r37xr"; depends=[combinat glmnet MASS]; }; - fclust = derive2 { name="fclust"; version="1.1.2"; sha256="08gi7w74215r44qbysg233s5n8r905b66gsi4i66xf5r7zgaqsm0"; depends=[]; }; + fclust = derive2 { name="fclust"; version="1.1.3"; sha256="1wpdvpfama90x8rj5yv54q7k318ad4y6pi33vsyh0rsb3fdrkqkr"; depends=[]; }; fcm = derive2 { name="fcm"; version="0.1.3"; sha256="1mqk6szczsixdvw0inkypij4cw2syng5l5ccw0xk55kc21l1lzn0"; depends=[ggplot2 reshape2]; }; - fcros = derive2 { name="fcros"; version="1.5.5"; sha256="1kyrilm6g0nqgba3bf4vbvcgcfj8044n6jfysbrvvlhwypkzqa0q"; depends=[]; }; + fcr = derive2 { name="fcr"; version="1.0"; sha256="17jrz5zp1msd2khl1lwnb5sgxcigagni556rhn7qm9g0aykbh8yj"; depends=[face fields mgcv]; }; + fcros = derive2 { name="fcros"; version="1.5.6"; sha256="0n1zbzl6g9k3smdpgyb3xsa2w8ir4bdagv7w644x1jck5rd0xn2j"; depends=[]; }; fcuk = derive2 { name="fcuk"; version="0.1.21"; sha256="1sb7p1m5qb88028mrw95lhh8l7dxj696hjh88nfsdpnscryknfpv"; depends=[magrittr purrr stringdist tibble]; }; - fdANOVA = derive2 { name="fdANOVA"; version="0.1.0"; sha256="10c12yns1sv4ph61hma1mymab03xyyx933f27977lw3c0npy7b02"; depends=[doBy doParallel fda foreach ggplot2 magic MASS]; }; + fdANOVA = derive2 { name="fdANOVA"; version="0.1.1"; sha256="16i0mnbxyjbw06havl277c6vi7mq5rak9cjzp8c2zvr8cakalkg4"; depends=[doBy doParallel fda foreach ggplot2 magic MASS]; }; fda = derive2 { name="fda"; version="2.4.7"; sha256="0371c32kxxvfdh18ldgc2p76dr2436ay0n9prdjwm9v0azp4rp9k"; depends=[Matrix]; }; fda_usc = derive2 { name="fda.usc"; version="1.4.0"; sha256="0gp19c5lxp0g4690vdr0gpw89rl9v3l6872mf7hr8nsyyd6776vn"; depends=[fda MASS mgcv nlme rpart]; }; fdaMixed = derive2 { name="fdaMixed"; version="0.5"; sha256="1k2b3z2jj37j6njvxalg8640zlcvi1cm7wkcwp0pia21wydz75ip"; depends=[Formula Rcpp RcppArmadillo]; }; @@ -6241,6 +6357,7 @@ in with self; { fdth = derive2 { name="fdth"; version="1.2-1"; sha256="0rr9p2rns5ws111iqcicrlpcv47fkbxf161yxkkzfs2l3f1kgw14"; depends=[]; }; feather = derive2 { name="feather"; version="0.3.1"; sha256="1q6dbkfnkpnabq8lb6bm9ma44cfcghx2lm23pyk3vg7943wrn1pi"; depends=[hms Rcpp tibble]; }; feature = derive2 { name="feature"; version="1.2.13"; sha256="07hkw0bv38naj2hdsx4xxrm2dngi6w3rbvgr7s50bjic8hlgy1ra"; depends=[ks misc3d rgl]; }; + featurefinder = derive2 { name="featurefinder"; version="1.0"; sha256="1hhfhc1gjmi770yljqhqrp9a5z5rrbd7bavznb758c26hpk7xilf"; depends=[plyr rpart rpart_plot]; }; features = derive2 { name="features"; version="2015.12-1"; sha256="0rd8r1dxzddb6718hcm8ck7531c9wdrjfy8n67875bbxgzcvds61"; depends=[lokern]; }; featurizer = derive2 { name="featurizer"; version="0.2"; sha256="05jvwsvpbdj94q3wl7ld6xmfc9p7ff9zsmryd3mmxz0hzbq2cnkc"; depends=[]; }; febr = derive2 { name="febr"; version="1.0-0"; sha256="0c0kgj31n2z2qqbga9waqrrm6xxksi27c6riyp1c57z4wjais860"; depends=[cellranger dplyr glue googlesheets knitr pedometrics readr sp stringr xlsx]; }; @@ -6274,11 +6391,11 @@ in with self; { filenamer = derive2 { name="filenamer"; version="0.2.2"; sha256="0289qpy4891fb71fa4bhc8wp4g7n1sw1kis5k5irdyyzmsa9dfhn"; depends=[]; }; fileplyr = derive2 { name="fileplyr"; version="0.2.0"; sha256="15rxls0njd6j2vxdahf4fx2nxmsa3rc41812v3wlaqas99naaxxr"; depends=[assertthat datadr tibble]; }; files = derive2 { name="files"; version="0.0.1"; sha256="1vhhawqjjbb6fadkn3l10mvz63w3vmcwvl93fk0q9mhkifzlj9kc"; depends=[]; }; - filesstrings = derive2 { name="filesstrings"; version="2.1.0"; sha256="1ik6m0ks6k1fhmpd3fk9z4mav3f8hs7si84vjcg8jk37xxqhfnd8"; depends=[checkmate magrittr matrixStats ore purrr Rcpp stringr tibble]; }; + filesstrings = derive2 { name="filesstrings"; version="2.2.0"; sha256="1qix25k0j1d1q3z5xiq9gc928kbb78w0j9083q5xsdik840d91kj"; depends=[BH checkmate magrittr matrixStats ore purrr Rcpp stringr tibble]; }; filling = derive2 { name="filling"; version="0.1.0"; sha256="0avlfl06nd8wn76ydii09ng2fqp92d4n9v2y5vg16m3my58l0srd"; depends=[CVXR nabor Rcpp RcppArmadillo Rdpack ROptSpace RSpectra]; }; financial = derive2 { name="financial"; version="0.2"; sha256="1v6jgs3rq57byin5mynslfjk3zrx91qz36558nn17mv6z0qsf10v"; depends=[]; }; finch = derive2 { name="finch"; version="0.2.0"; sha256="1vganbkz2d96xfz2jf1q0kqarc575w3nswss2igynsbbd0y53mjm"; depends=[data_table digest EML hoardr plyr rappdirs xml2]; }; - findR = derive2 { name="findR"; version="0.2.0"; sha256="03xkp8akjaciv2cl1przzz56nc3ma8l7pr4k0c3w2y0sivkmawdk"; depends=[pdftools]; }; + findR = derive2 { name="findR"; version="0.2.1"; sha256="1a7cf6kd7i2l4ffr2b17nb9xnpsjhf6fcwpjy06r0qgcapnfp54b"; depends=[pdftools stringr]; }; findpython = derive2 { name="findpython"; version="1.0.3"; sha256="1y08jk2ffmkf9zpwiz2xymjhfwqvls9vzsnq62v278ghw9d571jl"; depends=[]; }; findviews = derive2 { name="findviews"; version="0.1.3"; sha256="1l1yhw5hvrn0rpkdsch8m69d2q5284jwccvv7r4ia4m0iqjfipj7"; depends=[ggplot2 gridExtra scales shiny]; }; fingerPro = derive2 { name="fingerPro"; version="1.0"; sha256="17r23x8cdllr8slk56dsmrwc4ns69b3cqy59mxxbsjnhjl3di6x8"; depends=[car GGally ggplot2 gridExtra klaR MASS plyr Rcmdr Rcpp RcppGSL reshape rgl scales]; }; @@ -6296,6 +6413,7 @@ in with self; { fit4NM = derive2 { name="fit4NM"; version="3.3.3"; sha256="0k2194521yby6xxi77bpjp6ywz8kpnzws217m7n0hw6xwz5mqj1g"; depends=[cairoDevice gWidgets gWidgetsRGtk2 RGtk2 tkrplot]; }; fitDRC = derive2 { name="fitDRC"; version="1.1"; sha256="1f6avw8ia9ks17zdagpmh6yvcmi53h5cvm0wwv9hsb92x5zfhxn9"; depends=[]; }; fitODBOD = derive2 { name="fitODBOD"; version="1.1.0"; sha256="15ylldlq12mrw06pzww54hsl8nb9krs5w1cgh037km9sndsswvji"; depends=[hypergeo]; }; + fitPoly = derive2 { name="fitPoly"; version="3.0.0"; sha256="0ws1vsh8if9i9i7820ak32b0bysjc0z09nbrk17qpms0b11cpc3g"; depends=[foreach]; }; fitTetra = derive2 { name="fitTetra"; version="1.0"; sha256="0ia6wk4gicpmn6kclsd28p7v1npwfv2blagiz0cxzwfw3njv103g"; depends=[]; }; fitbitScraper = derive2 { name="fitbitScraper"; version="0.1.8"; sha256="0b4d7xw6inp6l1dkfwyrzxwg4vspp4vzlwrhv14ajxrqz6irj8a0"; depends=[httr jsonlite stringr]; }; fitdc = derive2 { name="fitdc"; version="0.0.1"; sha256="1b1abib7jkl7a6r686r53qjw2ywb9q2h67is8691kkaqxpawg30p"; depends=[]; }; @@ -6305,11 +6423,12 @@ in with self; { fitur = derive2 { name="fitur"; version="0.5.25"; sha256="0f33c4mg0257s9c0qldryihaq8p3y07j2nwghjpqhi3rv4mrg2xf"; depends=[actuar e1071 fitdistrplus ggplot2]; }; fivethirtyeight = derive2 { name="fivethirtyeight"; version="0.4.0"; sha256="1sdj5b365hi11dd2yxvg9w3fz3rx9rbv1nnhf5i8v2ydg4kqyrws"; depends=[]; }; fixedTimeEvents = derive2 { name="fixedTimeEvents"; version="1.0"; sha256="0z7ji8yzp4pj76ad64l7ivknkbi82ijx6abd3a18wicqhrh433sj"; depends=[]; }; + fixerapi = derive2 { name="fixerapi"; version="0.1.1"; sha256="0g1bs2d99yv6q6y8kh6s9skkfjany5737kys0yqy8mpflhymvh33"; depends=[jsonlite tibble tidyr]; }; fizzbuzzR = derive2 { name="fizzbuzzR"; version="0.1.1"; sha256="119gbi9y4n8r52hk9vj7zf795dv9xnk7lnngljjcd7ydnhygwd4h"; depends=[]; }; flacco = derive2 { name="flacco"; version="1.7"; sha256="1w77smmbrwglayr2rj88b00x7wan9f3x1fq8h6xyhybfvrw7vr0r"; depends=[BBmisc checkmate mlr]; }; - flam = derive2 { name="flam"; version="3.1"; sha256="12dkxisi56fg5720mh58jqrjvkqllqgzynafd44xalswkk4ahaak"; depends=[MASS Rcpp]; }; + flam = derive2 { name="flam"; version="3.2"; sha256="0v6kcl4n7wq052p7jdgbzlh9fpk8bzlrqw12i6pib1wd3slj0asa"; depends=[MASS Rcpp]; }; flan = derive2 { name="flan"; version="0.6"; sha256="0idlvi4xlfr5l0csj75xmn94856y71j92im6dwv0rcawkwh8ghqh"; depends=[lbfgsb3 Rcpp RcppArmadillo RcppGSL]; }; - flare = derive2 { name="flare"; version="1.5.0"; sha256="03bq40lwwq49vvbarf37y7c3smm29mxqfxsc66gkg8l5pak4l38i"; depends=[igraph lattice MASS Matrix]; }; + flare = derive2 { name="flare"; version="1.6.0"; sha256="0ygif9a7a99qwv0b488wymmmncp6f5ww9yz13s4qs6p8yf37x1r1"; depends=[igraph lattice MASS Matrix]; }; flars = derive2 { name="flars"; version="1.0"; sha256="06qma1ar1nj7n6g9alk1qydm5bkj6lsjx0pqkikxpb41d91civqk"; depends=[fda MASS Matrix Rcpp RcppEigen]; }; flashClust = derive2 { name="flashClust"; version="1.01-2"; sha256="0l4lpz451ll7f7lfxmb7ds24ppzhfg1c3ypvydglcc35p2dq99s8"; depends=[]; }; flatr = derive2 { name="flatr"; version="0.1.1"; sha256="10l98a3f57wahfpdqxj70r25zfhk4vzzd014pdnriy458yrfd7rw"; depends=[dplyr magrittr tibble]; }; @@ -6317,11 +6436,12 @@ in with self; { flexPM = derive2 { name="flexPM"; version="2.0"; sha256="0h3qs9w9pc2nc24q1diz7j3s93y40ijpmgq2l0xg9mzcgjz9kz8c"; depends=[survival]; }; flexclust = derive2 { name="flexclust"; version="1.3-5"; sha256="19ihdhmhaglccqpvrpc51367gkfafg4jdpabbk0j6mh2n16hi511"; depends=[lattice modeltools]; }; flexdashboard = derive2 { name="flexdashboard"; version="0.5.1"; sha256="0jb5wswbjr58g121nbvl93p73gxr8cx56kajgpiaw1fis6dsyfyz"; depends=[htmltools htmlwidgets jsonlite knitr rmarkdown shiny]; }; + flexmet = derive2 { name="flexmet"; version="1.0.0.0"; sha256="0xhr4i46s3k7a4yz2sd1sphn8wz27xcl580s2kqkr1ifg8941kv8"; depends=[]; }; flexmix = derive2 { name="flexmix"; version="2.3-14"; sha256="0sl4zxh1sb2sr5q7svjw9ihrm219jzn82yrc9d43q6r1b8bpyz43"; depends=[lattice modeltools nnet]; }; flexrsurv = derive2 { name="flexrsurv"; version="1.4.1"; sha256="13jq7yk7rz2148wkf7dv28l79zwdf1gpfkd5khgacb8hl5kml3p0"; depends=[Epi formula_tools matrixcalc orthogonalsplinebasis survival]; }; flexsurv = derive2 { name="flexsurv"; version="1.1"; sha256="1vj8zsfgq2rv6v7na4w7n7z3farc69qsavm7pnmnhkaylz61gq26"; depends=[deSolve mstate muhaz mvtnorm quadprog Rcpp survival]; }; flexsurvcure = derive2 { name="flexsurvcure"; version="0.0.2"; sha256="1lhw2z8i4l822ncziwpw6hg0dzc244q60n7l5aahgdhcr0xgylhz"; depends=[flexsurv gtools survival]; }; - flextable = derive2 { name="flextable"; version="0.4.2"; sha256="07a962ylr3y8v31557iqzr1m0c8bvprilfdimwzjl9fhlplb9y4h"; depends=[gdtools htmltools knitr officer R6 rmarkdown stringr]; }; + flextable = derive2 { name="flextable"; version="0.4.4"; sha256="12f33szyxf4b7ipz4j9sli6miwkjq2309rpinaxmnsqsafd1zn3b"; depends=[gdtools htmltools knitr officer R6 rmarkdown stringr]; }; flifo = derive2 { name="flifo"; version="0.1.4"; sha256="1yilfnblarimc8mlvvwsgib5sxcfgvgsvgpyzddxb39g6fb7lffs"; depends=[bazar pryr]; }; flip = derive2 { name="flip"; version="2.4.3"; sha256="04zf2gnk5w57gxnlnh26pn1ir1wfrzxhfhchr33ghk7prhc7k4b8"; depends=[cherry e1071 Rcpp RcppArmadillo someMTP]; }; flippant = derive2 { name="flippant"; version="1.1.0"; sha256="06aj90y7c33c1q0nw1c67vr1pfmp9fw78az6ivrbq110f2k1m12w"; depends=[assertive_files assertive_numbers assertive_properties assertive_strings assertive_types data_table ggplot2 magrittr minpack_lm plyr RcppRoll stringi withr wmtsa]; }; @@ -6336,20 +6456,21 @@ in with self; { flowr = derive2 { name="flowr"; version="0.9.10"; sha256="18mjshfg3827b26b8nz52pl04ph7n887vw0ym5fybjm8gy5wwpdg"; depends=[diagram params whisker]; }; flows = derive2 { name="flows"; version="1.1.1"; sha256="0l152p17plkrbnrlis8rfr9ij406agckdxvnjsciilv6qwcync29"; depends=[igraph reshape2 sp]; }; flsa = derive2 { name="flsa"; version="1.05"; sha256="07z2b1pnpnimgbzkjgjl2b074pl9mml7nac2p8qvdgv7aj070cmh"; depends=[]; }; + fluoSurv = derive2 { name="fluoSurv"; version="1.0.0"; sha256="1dv4lf7k28bih2qqkpy15f7d14ibxk48p3z6sj3dj5yvh25mhv81"; depends=[]; }; flux = derive2 { name="flux"; version="0.3-0"; sha256="0pc9cab2pwrfl0fnz29wp7a398r49hvbi50jp8i2fk2rfvck21a7"; depends=[caTools]; }; fluxweb = derive2 { name="fluxweb"; version="0.1.0"; sha256="1fwxqm8pn9h0bl1cpvz9rx56zsvxz22la5bj8yrrkbg3m8jdzgvi"; depends=[]; }; fma = derive2 { name="fma"; version="2.3"; sha256="1z7shh9ng3q7ax22cwg86y79jzz5gbchdny2rppzzm0lkvvyy5pm"; depends=[forecast]; }; fmbasics = derive2 { name="fmbasics"; version="0.3.0"; sha256="1dnf09rgwpc7n7ydlp7r5cwy2fa4vh1h9mbjqzfhk0208kz6jpl0"; depends=[assertthat fmdates lubridate tibble]; }; fmdates = derive2 { name="fmdates"; version="0.1.4"; sha256="1bbcwkh65nf2gak9b81zgg32c5ihwhmai3nc43ayf6ivhqsxw8x0"; depends=[assertthat lubridate]; }; - fmlogcondens = derive2 { name="fmlogcondens"; version="1.0.0"; sha256="15n2vjfriicg3mijzkz55w54xyq0h8zjchhlgdxsycysqv59lxag"; depends=[geometry MASS mclust mvtnorm]; }; + fmlogcondens = derive2 { name="fmlogcondens"; version="1.0.2"; sha256="0slmwzcmsl5cfgif6d47xfjknmap0x45cql339dyamwmhqm968rk"; depends=[geometry MASS mclust mvtnorm]; }; fmri = derive2 { name="fmri"; version="1.7-2"; sha256="1ifp0fkmr0bj5vkg9vh0lk74f04fk0zc90vknmjmxd2hbdb5kh4r"; depends=[awsMethods metafor nlme]; }; fmriqa = derive2 { name="fmriqa"; version="0.3.0"; sha256="1z09nf1c305a78c129jvs21b9z91wyhazz41wrn4bimmhfhx7szv"; depends=[ggplot2 gridExtra imager optparse pracma RcppEigen reshape2 RNifti tidyr viridisLite]; }; fmrs = derive2 { name="fmrs"; version="1.0-9"; sha256="1x9g67701kcnz3p97iynr74sn0mfpxpp16mv1l4zxlhhfn2v5lwx"; depends=[survival]; }; - fmsb = derive2 { name="fmsb"; version="0.6.1"; sha256="1kdw0j1jl76dzsk56lpl5vvrx5l0w9rc94kmj1dhbqb5yh64xai7"; depends=[]; }; + fmsb = derive2 { name="fmsb"; version="0.6.3"; sha256="1n29bnyp20pvpk2lsa9fblsj5w7amp14snc74pk5w3yr5y6rj0s5"; depends=[]; }; fmt = derive2 { name="fmt"; version="1.0"; sha256="13gsywnyvf9zy5n644g2xyd60f92w2dp7vil2dncjvjcqsib22a0"; depends=[]; }; foba = derive2 { name="foba"; version="0.1"; sha256="1af8whgl66v0vwzdf03b6141k3dysdc0svymlgifcga5gqkwzsl0"; depends=[]; }; focusedMDS = derive2 { name="focusedMDS"; version="1.3.3"; sha256="18s86dbbpyajscqr9frprf2vp1zif7vh4lw5m0cjskfc6gmsdp2p"; depends=[htmlwidgets]; }; - foghorn = derive2 { name="foghorn"; version="1.0.1"; sha256="14g82mvh7ylqdms5si3xna1zy5jfxjksv5v2ijikjz40iddxmh5s"; depends=[clisymbols crayon curl httr jsonlite rvest tibble xml2]; }; + foghorn = derive2 { name="foghorn"; version="1.0.2"; sha256="17bng0fxjqrlni11vwmghimk0h38mlyjyxizrbs1fycb8khlqh94"; depends=[clisymbols crayon curl httr jsonlite rvest tibble xml2]; }; fold = derive2 { name="fold"; version="0.2.5"; sha256="1h7vx8saq4mbmylh1zgldm8n17i8waq8fgr5d4q68553xmazws41"; depends=[csv dplyr encode lattice lazyeval magrittr metaplot rlang spec tidyr]; }; fontBitstreamVera = derive2 { name="fontBitstreamVera"; version="0.1.1"; sha256="0nipdlmhjv1wr3aidcl97nk6mppdkd65krgwqnhdsnv0jpfv761j"; depends=[]; }; fontHind = derive2 { name="fontHind"; version="0.1.1"; sha256="0qz3bj8vdy6jayy84p3vyxfwqll4v4qlklwq9wl981ii2k7g0vxf"; depends=[extrafont ggplot2 hrbrthemes]; }; @@ -6363,10 +6484,9 @@ in with self; { foreSIGHT = derive2 { name="foreSIGHT"; version="0.9.2"; sha256="1wr99jq8a0cbc7n5sdzr0gwnxsv8sjqy1x1lrazxswyj49xc06i4"; depends=[cowplot directlabels doParallel GA ggplot2 moments zoo]; }; foreach = derive2 { name="foreach"; version="1.4.4"; sha256="0j2yj0rn0d5nbzz9nq5rqqgnxhp9pbd92q4klsarl2xpsn8119y0"; depends=[codetools iterators]; }; forecTheta = derive2 { name="forecTheta"; version="2.2"; sha256="1a7ip3czm8k82kb8dx95m8q47kjhifdj51gzavd1zj9ni3vwbhfn"; depends=[forecast tseries]; }; - forecast = derive2 { name="forecast"; version="8.2"; sha256="04mqx1szm22lhiqzncm8ad0kyqhv1y4d6v02gn70d78kxmjangzb"; depends=[colorspace fracdiff ggplot2 lmtest magrittr nnet Rcpp RcppArmadillo timeDate tseries zoo]; }; - forecastHybrid = derive2 { name="forecastHybrid"; version="2.0.10"; sha256="04lspngh44y815amxlnhl74k5g7sj3bm0w8yy58fk8nqrl382pb6"; depends=[doParallel foreach forecast ggplot2 reshape2 zoo]; }; + forecast = derive2 { name="forecast"; version="8.3"; sha256="0k5b9skjpyzx7gbd8z6f3d92wl2f8zgli781m4jg903ra0hsyncj"; depends=[colorspace fracdiff ggplot2 lmtest magrittr nnet Rcpp RcppArmadillo timeDate tseries urca uroot zoo]; }; + forecastHybrid = derive2 { name="forecastHybrid"; version="2.1.11"; sha256="01jmq6mw3idvascgrmr7i69pllqzdwbks42748pq18znw3f2yvjl"; depends=[doParallel foreach forecast ggplot2 reshape2 zoo]; }; forecastSNSTS = derive2 { name="forecastSNSTS"; version="1.2-0"; sha256="1rnf2a7sri52sm976iicab660qk07pmz8jmd3q71dg4hmc30yf9j"; depends=[Rcpp]; }; - forega = derive2 { name="forega"; version="1.0.3"; sha256="1n1gqm0bjdw13jm95zp0ni0hps07xjkswzrszvamn2f6sglrn73d"; depends=[forecast Rcpp robfilter]; }; foreign = derive2 { name="foreign"; version="0.8-69"; sha256="0s1lxmd85dd0kxx8hwk02w9l7pmpk4bpy7787fbyh2dbq5g9ys0k"; depends=[]; }; forensic = derive2 { name="forensic"; version="0.2"; sha256="0kn8wn6p3fm67w88fbarg467vfnb42pc2cdgibs0vlgzw8l2dmig"; depends=[combinat genetics]; }; forensim = derive2 { name="forensim"; version="4.3"; sha256="1jhlv9jv832qxxw39zsfgsf4gbkpyvywg11djldlr9vav7dlh3iw"; depends=[tcltk2 tkrplot]; }; @@ -6394,7 +6514,7 @@ in with self; { fpmoutliers = derive2 { name="fpmoutliers"; version="0.1.0"; sha256="108bp3smk9jnckd5237xly4ywmal03rq1kidq5z61l6zrhc3yfh9"; depends=[arules doParallel foreach Matrix pmml pryr R_utils XML]; }; fpow = derive2 { name="fpow"; version="0.0-2"; sha256="0am3nczimcfrm9hi02vl2xxsh703qjmr2j11y014mll3f2v1l8cy"; depends=[]; }; fpp = derive2 { name="fpp"; version="0.5"; sha256="1jqnx6bgpvnbbj2fa2b6m6aj8jd5cb9kz877r8kp7a5qj62xv1ww"; depends=[expsmooth fma forecast lmtest tseries]; }; - fpp2 = derive2 { name="fpp2"; version="2.2"; sha256="1mjd8mk169k47mb3cjgd72zgjivrh4kr1yclxxxdds3bm1jh2x8l"; depends=[expsmooth fma forecast ggplot2]; }; + fpp2 = derive2 { name="fpp2"; version="2.3"; sha256="1krrvwg25qjfpfjdwd3n0d87ihl4zf7y1bnh6gbi92sdja3ljq48"; depends=[expsmooth fma forecast ggplot2]; }; fptdApprox = derive2 { name="fptdApprox"; version="2.1"; sha256="00vxwcwca7zfm4fr0x9898snr6j0474ci1bahjmpj2jxiclwnhzs"; depends=[]; }; fracdiff = derive2 { name="fracdiff"; version="1.4-2"; sha256="03l5dqpqwwi5c8fwc2vissfawcsignai60h2zalknkibvk782dwq"; depends=[]; }; fracprolif = derive2 { name="fracprolif"; version="1.0.6"; sha256="1cpb71yk1245j6qz4mqvpqc3s3lrmav4blp5wlxasjizn3ilwh66"; depends=[emg numDeriv]; }; @@ -6429,14 +6549,14 @@ in with self; { frontier = derive2 { name="frontier"; version="1.1-2"; sha256="1vpjd57cc6niwqibhz1ib46zj57d5a9m40yaq7kr9awk9di65ryz"; depends=[Formula lmtest micEcon miscTools moments plm]; }; frontiles = derive2 { name="frontiles"; version="1.2"; sha256="08qq25wbylvhvmq34wggyj0hwdlxfs9rfs8gjqsrg50xccchniqi"; depends=[classInt colorspace rgl sp]; }; frt = derive2 { name="frt"; version="0.1"; sha256="1qy76a1wkznaqzlyj1nq74mf1pnyly1s8gnff8q30zfccqk68cxv"; depends=[]; }; - fs = derive2 { name="fs"; version="1.1.0"; sha256="1rcpji6qygjm75y51gb6x0vg0fjnvkl3x734d6dgd50xal59blb9"; depends=[Rcpp]; }; + fs = derive2 { name="fs"; version="1.2.2"; sha256="194sl0vv0p2h1z474yzh9agqj1w02ppvkpz5p1b8ljn794h4ar7a"; depends=[Rcpp]; }; fscaret = derive2 { name="fscaret"; version="0.9.4.3"; sha256="1miqg7rd3q11aksbjf0nswwnxb7c2p2f0b85nmnwm11snbf1gg8s"; depends=[caret gsubfn hmeasure]; }; fsdaR = derive2 { name="fsdaR"; version="0.2-21"; sha256="121khfqy1ixqp86cl3cngc40zxjpd4nm5k0lk558nxcfgyyzvx8y"; depends=[rJava robustbase]; }; fsia = derive2 { name="fsia"; version="1.1.1"; sha256="0id7cnswrqylgpwjil1zfn89ryrdpl20fim8x1srl8s1hm5bg35r"; depends=[]; }; fslr = derive2 { name="fslr"; version="2.17.3"; sha256="1g7z1jsj89kqyclb3qdc7c6dgn18jqjmrxpxi62llkixhqg21yha"; depends=[matrixStats neurobase oro_nifti R_utils]; }; fso = derive2 { name="fso"; version="2.0-1"; sha256="02dr12bssiwn8s1aa1941hfpa4007gd65f3l4s74gs2vgjzdxf8s"; depends=[labdsv rgl]; }; fst = derive2 { name="fst"; version="0.8.4"; sha256="1jarhz5c6bib4n3xms1xhgybzaqdf4llfbgmnqndz2gwxjx1igia"; depends=[Rcpp]; }; - fsthet = derive2 { name="fsthet"; version="1.0.0"; sha256="10mimnlq01q0mmaljfp27iq0pv11znbcv3mah57nrwpy0a3zqwhb"; depends=[]; }; + fsthet = derive2 { name="fsthet"; version="1.0.1"; sha256="0z6az1jcvdahgn97r6cpj1s6fn0lvr7j12gcw2r7wbpajrvyl5j6"; depends=[]; }; ftDK = derive2 { name="ftDK"; version="1.0"; sha256="1xs2rr2afjza97kpym5zkas3k78pilxjlh7lp1gc66banldr71g2"; depends=[dplyr httr pbapply purrr tibble]; }; ftnonpar = derive2 { name="ftnonpar"; version="0.1-88"; sha256="0df9zxwjpfc939ccnm1iipwhpf76b34v0x74nsi1mm1g927dfl0i"; depends=[]; }; fts = derive2 { name="fts"; version="0.9.9"; sha256="1qgp8xdwr5pp2b7nd8r717a6p8b6izwqrindx2d1d0lhhnqlcwhv"; depends=[BH zoo]; }; @@ -6449,7 +6569,7 @@ in with self; { fun = derive2 { name="fun"; version="0.1-0"; sha256="0z4nq2w1wz1clc7cf87pf870hayxq5mpzhllfgwj4mmh2xpphnrf"; depends=[]; }; funData = derive2 { name="funData"; version="1.2"; sha256="0y3ar26d6hxc4bg263qjqfb92ivhkphzizhz91wrzbfxha9dcrzz"; depends=[abind fields foreach]; }; funFEM = derive2 { name="funFEM"; version="1.1"; sha256="08798lvryykrxfvp2297anzl4gi81gwvc1qyyzq16nafjf65kwfy"; depends=[elasticnet fda MASS]; }; - funHDDC = derive2 { name="funHDDC"; version="1.0"; sha256="038m64yv27wz7ki2gcn94q011p8mv0ggmli5n27y0f5bnkfh6d6w"; depends=[fda]; }; + funHDDC = derive2 { name="funHDDC"; version="2.0"; sha256="0bd58pdsg9036vk54fayvzr6il56bamrvn5vhqc3g92papp9jlm8"; depends=[fda MASS]; }; funModeling = derive2 { name="funModeling"; version="1.6.7"; sha256="0blanw0aw7qvcs6a8ryaqvi322gaz65g6flijkbssf681im9pmjr"; depends=[dplyr entropy ggplot2 gridExtra Hmisc lazyeval moments pander RColorBrewer reshape2 ROCR scales]; }; funbarRF = derive2 { name="funbarRF"; version="1.0.1"; sha256="05smi717j4zhbrfqjyvx1rzckygigg1x8c6kb3brbpv8w33gcvx7"; depends=[BioSeqClass Biostrings bold randomForest]; }; funchir = derive2 { name="funchir"; version="0.1.4"; sha256="1mbsy65628q117c2k01wvibpjd3ibigy4yc1c8m0rf9jwsc67qjb"; depends=[data_table]; }; @@ -6457,11 +6577,12 @@ in with self; { functools = derive2 { name="functools"; version="0.2.0"; sha256="0g62jdia3n09vq8mx1m2r4nl3jfcadzpym0wkldzzzjcfs90vl6b"; depends=[]; }; funcy = derive2 { name="funcy"; version="0.8.6"; sha256="0wlcwwmv92djj35i7nnfns5l79fca6hsfrjxgsqmwgjb28gy19bs"; depends=[calibrate car caTools cluster fda fields flexclust kernlab MASS Matrix plyr sm wavethresh]; }; fungible = derive2 { name="fungible"; version="1.5"; sha256="1f4q26rfl7d35ng5nx11mzzv9fhk4zg62j63c59i649wcx1xsan9"; depends=[e1071 lattice MASS mvtnorm nleqslv R2Cuba stringr]; }; + funnelR = derive2 { name="funnelR"; version="0.1.0"; sha256="143lb048krgh8rkkz6sm8h464kdy62w29fvvyar795vqi10bb5fy"; depends=[ggplot2]; }; funr = derive2 { name="funr"; version="0.3.2"; sha256="11mjd1ba9kwawh7k5py54mkq4g1df79d7qivan8fj11qfwfzm679"; depends=[]; }; funrar = derive2 { name="funrar"; version="1.2.2"; sha256="179kxhwkd431d2n917mzjnr5qvh09f0hdm2c78lww4ijb54dhn0l"; depends=[cluster dplyr]; }; funreg = derive2 { name="funreg"; version="1.2"; sha256="199zvqali0sb0z4yp20rm5da0kd7z3rgv47g1cb1apsbcw0cq51n"; depends=[MASS mgcv mvtnorm]; }; funtimes = derive2 { name="funtimes"; version="5.0"; sha256="0xq0n3939rsrz7dna4d3d7mrpxad2xswnblsc4a88nbq6cmx5c70"; depends=[dbscan Jmisc Kendall]; }; - furniture = derive2 { name="furniture"; version="1.7.3"; sha256="1bayp2cfd3vacy83jf9x5l2kp4dr2kvfx9zvmw7z2z03lfmjj841"; depends=[knitr]; }; + furniture = derive2 { name="furniture"; version="1.7.6"; sha256="0yz3l6lrfq5mbh4d7z6ny2gg3qixglcl9lvvs97a3l7mqwi5x4h9"; depends=[knitr]; }; fuser = derive2 { name="fuser"; version="1.0.0"; sha256="0l2ddc3lal3gvzkn8b09i7pzd9nvqnr45naz3ni52nmgygwdk5ma"; depends=[glmnet irlba Matrix Rcpp RcppEigen RSpectra]; }; fusionclust = derive2 { name="fusionclust"; version="1.0.0"; sha256="1h03nlk4gnz4j5h2h5bxazkka2qq983h7nglm1ghzqvbqjk6sv37"; depends=[bbmle]; }; futile_any = derive2 { name="futile.any"; version="1.3.2"; sha256="09z12dlj7cnkfwnmgsjknsghirv1cry83w4a9k4d0w5a1jnlr5jg"; depends=[lambda_r]; }; @@ -6470,7 +6591,7 @@ in with self; { futile_options = derive2 { name="futile.options"; version="1.0.0"; sha256="1hp82h6xqq5cck67h7lpf22n3j7mg3v1mla5y5ivnzrrb7iyr17f"; depends=[]; }; futile_paradigm = derive2 { name="futile.paradigm"; version="2.0.4"; sha256="14xsp1mgwhsawwmswqq81bv6jfz2z6ilr6pmnkx8cblyrl2nwh0v"; depends=[futile_options RUnit]; }; futility = derive2 { name="futility"; version="0.2"; sha256="0njckhwmawqhiznv241yjghh99wl72c4xknp9nzbmvi5j575rnlh"; depends=[]; }; - future = derive2 { name="future"; version="1.7.0"; sha256="0lfzw53z1d4bksishjkmwphfkgdr6zpvnpwr1jx8dsj0b1y2laiq"; depends=[digest globals listenv]; }; + future = derive2 { name="future"; version="1.8.0"; sha256="096pfwafiwr16m13qda824ba3mzqabz4cdbg08sz1vh5s2k2hp4c"; depends=[digest globals listenv]; }; future_BatchJobs = derive2 { name="future.BatchJobs"; version="0.15.0"; sha256="0r1bnp9mnv8jk9d6dpr94cqn4zihpm7cgxqj0c3l0x9b6i0ny3z2"; depends=[BatchJobs future R_utils]; }; future_apply = derive2 { name="future.apply"; version="0.1.0"; sha256="1c5jyklam5j9lmr5jmn6972wwlbyaaihy4kczxib87glmc4g0a4k"; depends=[future globals]; }; future_batchtools = derive2 { name="future.batchtools"; version="0.6.0"; sha256="0npvy8d927k3ilmnwcq1fh5lvpdr009pyc93ils5qhwhfma3wfh0"; depends=[batchtools future]; }; @@ -6487,7 +6608,7 @@ in with self; { fwsim = derive2 { name="fwsim"; version="0.3.3"; sha256="1ix4sl2krlr0b0wfgvy73qhpmkjymqcci3q3v60j20zapi55gxn2"; depends=[Rcpp]; }; fxregime = derive2 { name="fxregime"; version="1.0-3"; sha256="15fh8yhcba2gw2xfd0yiw5ssvbgb62l6vb28bxz71ckdyv9nsahk"; depends=[car sandwich strucchange zoo]; }; g_data = derive2 { name="g.data"; version="2.4"; sha256="14a4m0v38p3j1k1kymkxwydlgm8b73hlx9m80sg1l4aj38fvflzl"; depends=[]; }; - g2f = derive2 { name="g2f"; version="0.1"; sha256="1njx03hnfvzqyzhyjg5zwikv36xggss2vc82vpfybg6rqkx3rqbd"; depends=[KEGGREST minval sybil]; }; + g2f = derive2 { name="g2f"; version="0.2"; sha256="1jsmiv6v8ilpxg1k1npcgqa467hpyw7mzh5m8dp7bxar4j5npsp4"; depends=[KEGGREST minval sybil]; }; gCat = derive2 { name="gCat"; version="0.1"; sha256="10990ilsjk52kqkcdngj4nq0kcbn4w1syxl1mqjq2n5g1l002yjy"; depends=[]; }; gIPFrm = derive2 { name="gIPFrm"; version="3.1"; sha256="08rfdac442picbw1r3xyxjzf2dc57svg44am0714z4r72mshvj04"; depends=[]; }; gLRTH = derive2 { name="gLRTH"; version="0.2.0"; sha256="1drmmr576n3pbr0q1cnnx4k7r4iz061n2cizv1kpr3wcc1g291pn"; depends=[]; }; @@ -6496,14 +6617,14 @@ in with self; { gMWT = derive2 { name="gMWT"; version="1.1"; sha256="1ws96x3vjswh6m6s9zn3r9gp7xp6ybdkkxsq9a73ng2zqz2qjdl0"; depends=[clinfun Rcpp RcppArmadillo]; }; gPCA = derive2 { name="gPCA"; version="1.0"; sha256="1ylb1d24dxnzpws9bbanwhyizjr3ljky2bhrph4c5yaq0zwwbrkw"; depends=[]; }; gPdtest = derive2 { name="gPdtest"; version="0.4"; sha256="00dlhnklfg2yp4hp7yjgr2nfswv22c007xq1mxdbkll62zgd94mq"; depends=[]; }; - gProfileR = derive2 { name="gProfileR"; version="0.6.4"; sha256="1cka02zbz1rbppm782qpxk1xn9qxbrv2gp5rgf970j906hxm2y0b"; depends=[plyr RCurl]; }; + gProfileR = derive2 { name="gProfileR"; version="0.6.5"; sha256="1x6ym5bdlpc5z3h3wpyryym2g6qvm45blydw7s44bi165r30vrim"; depends=[plyr RCurl]; }; gRain = derive2 { name="gRain"; version="1.3-0"; sha256="0xb746pyh8k8w1a8nz7z41bflx5xr0cqdq5l5wj7j464zv2cw6jy"; depends=[functional graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen]; }; gRapfa = derive2 { name="gRapfa"; version="1.0"; sha256="07yzwzna9pdyzndxk6wwyl6v3gkfc7dvy1ixmdl3d38mcl1ahwyq"; depends=[igraph]; }; gRbase = derive2 { name="gRbase"; version="1.8-3"; sha256="143qvs5mwypswdq344a48kzn83sx9jskdr9w6kxa3fzhdcqlhi7d"; depends=[graph igraph magrittr Matrix RBGL Rcpp RcppArmadillo RcppEigen]; }; gRc = derive2 { name="gRc"; version="0.4-2"; sha256="0cqc3s7a1njxzmnx7yx1yjkrazbai3gpw2kc4l7g49ld4j40bsln"; depends=[gRbase MASS]; }; gRim = derive2 { name="gRim"; version="0.2-0"; sha256="0ihl4vsnp6xkcpcf37p2xcqnbvyvjamcz5060f1kirn8xzwzq29y"; depends=[gRain graph gRbase igraph Rcpp RcppArmadillo]; }; gSEM = derive2 { name="gSEM"; version="0.4.3.4"; sha256="18kh41ibvfflz59gykiq7j2c6a72i8b0w8c2mcprd1nzhnyhvmhy"; depends=[DiagrammeR htmlwidgets knitr MASS]; }; - gSeg = derive2 { name="gSeg"; version="0.4"; sha256="0fcjhf8hznh1rzyfrk3f3hy16zs1n61b7r3j90pzg873razf97a2"; depends=[]; }; + gSeg = derive2 { name="gSeg"; version="0.5"; sha256="1f3appvy78adv9jll47smgw2apm3dkm9zrm17hhdxmcnqypd7ias"; depends=[]; }; gTests = derive2 { name="gTests"; version="0.2"; sha256="1h1sd8mrzcniq7rx7frdlxwpnsn8lifng1x99fqq703hs3znl1yq"; depends=[ade4]; }; gWQS = derive2 { name="gWQS"; version="1.0.0"; sha256="0n0zwfqz5g4js5y3ss64dv5842jypr6sqacs32ax37immd34slhq"; depends=[ggplot2 Rsolnp tableHTML ztable]; }; gWidgets = derive2 { name="gWidgets"; version="0.0-54"; sha256="13lbbbnmkvb559klgsnz0q27qlyv102xakb6yccxsxjw249hm8c2"; depends=[]; }; @@ -6518,12 +6639,12 @@ in with self; { galts = derive2 { name="galts"; version="1.3.1"; sha256="0jg0yng1kc6s0qdhq8ps38dsxdcrgdcn8dl2dlclw6rcbknb6h4k"; depends=[DEoptim genalg]; }; gam = derive2 { name="gam"; version="1.15"; sha256="1w6icadyfyqlkz5qijwifa3z96d460m88k8b2iaqj0cf6agmydhy"; depends=[foreach]; }; gamCopula = derive2 { name="gamCopula"; version="0.0-4"; sha256="1nj5pxcbr6k7k1m44ky306yycpx20pw8awlx7lzyw1rx1hrv5ivb"; depends=[copula doParallel foreach gsl igraph MASS mgcv numDeriv VineCopula]; }; - gamRR = derive2 { name="gamRR"; version="0.3.0"; sha256="07zgh6hxkqxrw5da1pbscl8z8hzbgc5ipkzmpimimxa0i9g04c4h"; depends=[boot mgcv]; }; + gamRR = derive2 { name="gamRR"; version="0.4.0"; sha256="0grd9d7rar4lq82v55k7c2d3h0g2lh7ny4bpxanqgrq02jkpnz1p"; depends=[boot mgcv]; }; gamair = derive2 { name="gamair"; version="1.0-0"; sha256="13n2n4b7givzvia93awy7ym0gihl4lr08w3a6ny2pq0f3zbhzw97"; depends=[]; }; gambin = derive2 { name="gambin"; version="2.3.0"; sha256="1kwh8s191m6gsjczqc3svf6zp1k4zi86rqz7s94rahg84vwh6a9b"; depends=[doParallel foreach gtools]; }; gamboostLSS = derive2 { name="gamboostLSS"; version="2.0-0"; sha256="0z9wzvxjhnjl2bjnd5pxqzvv43hak7x5m23j76qnm05j12vw4bz1"; depends=[mboost stabs]; }; gamboostMSM = derive2 { name="gamboostMSM"; version="1.1.87"; sha256="0if0x92lch57ksll8d5i3jzk0kh40593b20c17g3hvc33920c7r0"; depends=[mboost]; }; - gamclass = derive2 { name="gamclass"; version="0.56"; sha256="13gy8ys69dkhm54x3vcpqblq4j2hkbsnaswzcq0v0saqd9b1shcs"; depends=[ape car DAAG KernSmooth lattice latticeExtra MASS mgcv randomForest rpart]; }; + gamclass = derive2 { name="gamclass"; version="0.57"; sha256="08s44n6x7m01gw02q4zgpa5vxbcgx6mnqgmdn6760ff66wy4zrgc"; depends=[ape car DAAG KernSmooth lattice latticeExtra MASS mgcv randomForest rpart]; }; games = derive2 { name="games"; version="1.1.2"; sha256="01hbbr2hsxi5j9axpdl0jihpd55pa9hacjxmab8p7cixk3xqqqbf"; depends=[Formula MASS maxLik stringr]; }; gamesGA = derive2 { name="gamesGA"; version="1.1.3.2"; sha256="0srxsm1zhrx1dpm94mkcsds6rwkx9gi9yfbrkzylhrxgi4g8pvwp"; depends=[shiny]; }; gamlr = derive2 { name="gamlr"; version="1.13-4"; sha256="08igzs2raz6nnkz2aisxaq9jy2mlb49cqlm6gwxp0mrag4q6xxrz"; depends=[Matrix]; }; @@ -6542,11 +6663,11 @@ in with self; { gamm4 = derive2 { name="gamm4"; version="0.2-5"; sha256="11wblnh22xq3m3z25i30v2kd0zlf8wa3cm5z38z56rhk3l2wf5bc"; depends=[lme4 Matrix mgcv]; }; gamm4_test = derive2 { name="gamm4.test"; version="0.1.0"; sha256="0ab6rksr88fsv6whp6cxyshpv5ixmf9lw51cl3rzk870r8q326wg"; depends=[doParallel foreach gamm4 Matrix mgcv plotly RColorBrewer]; }; gamreg = derive2 { name="gamreg"; version="0.3"; sha256="1svrgbb8qdy2hzpq1g38v2lzmlbrn7qljix827biqzwgiajy69gg"; depends=[doParallel foreach glmnet Rcpp RcppArmadillo robustHD]; }; - gamsel = derive2 { name="gamsel"; version="1.8-0"; sha256="0s29czlakix5ksblixcv7y5in5az9syzs2n71mqzf32vqgf8sf18"; depends=[foreach mda]; }; + gamsel = derive2 { name="gamsel"; version="1.8-1"; sha256="107hbshi36dcyykhy6w1i1ih84xwdqv1q3nad73d3krf7bhvhg5f"; depends=[foreach mda]; }; gaoptim = derive2 { name="gaoptim"; version="1.1"; sha256="04igpn73k6f6652y496igwypfxmz4igg4jgxx6swqyi37182rqhm"; depends=[]; }; gap = derive2 { name="gap"; version="1.1-21"; sha256="0vslbk66h1gkpqrpj4pkxnx7nr1fnjp0zvym9cxzyxww797bd57s"; depends=[]; }; gap_datasets = derive2 { name="gap.datasets"; version="0.0.2"; sha256="0skxgiwymd8c4vsy2dbddifjj9a0bq52gdd2r62slsv0q9haw96y"; depends=[]; }; - gapfill = derive2 { name="gapfill"; version="0.9.5-3"; sha256="1hwccvshz9z1zgjjrdk6iri272ih11cwpz91rldkpcwly6pqcwhk"; depends=[fields foreach ggplot2 quantreg Rcpp]; }; + gapfill = derive2 { name="gapfill"; version="0.9.6"; sha256="0384v7capab7dbyvz6b2jvnh840z6ab3857my0h3cgsys3lhn3c5"; depends=[fields foreach ggplot2 quantreg Rcpp]; }; gapmap = derive2 { name="gapmap"; version="0.0.4"; sha256="0xz19n0vvdzbfg6afp3y0qfbs3f2nfxib1cyya3cax5wqqfbzw3i"; depends=[ggplot2 reshape2]; }; gapminder = derive2 { name="gapminder"; version="0.3.0"; sha256="067cra1ca4ngwjx8d1y9pyzwcpsfi1wcal0glzyy6ghd1k6jflpv"; depends=[tibble]; }; gaselect = derive2 { name="gaselect"; version="1.0.5"; sha256="0xzx00n46x6x7w1xbx8nvabkkrna45pv1i70787m8h05q1yrjjij"; depends=[Rcpp RcppArmadillo]; }; @@ -6558,7 +6679,7 @@ in with self; { gaussfacts = derive2 { name="gaussfacts"; version="0.0.2"; sha256="095x7k7m7sy1gqkbm6wiqn26252dclz62sbnkv6cjvmbdxajl7m9"; depends=[]; }; gaussquad = derive2 { name="gaussquad"; version="1.0-2"; sha256="0bcvkssmwwngcd4cnv924n9h3c8z1w3x9c9bkwn5jbz9zyv1lfms"; depends=[orthopolynom polynom]; }; gazepath = derive2 { name="gazepath"; version="1.2"; sha256="0h5a9bpgx268yh0zy3y4xfvij1ncx92x5qphjc94xmzbrl0br1mf"; depends=[jpeg scales SDMTools shiny zoo]; }; - gb = derive2 { name="gb"; version="1.1.8-8"; sha256="18n9wqz82mjxjgzk8vc68kyz3b6lk21d2f16551d6fikjla03adf"; depends=[boot]; }; + gb = derive2 { name="gb"; version="2.3.3"; sha256="0gkdkbwr168vi7lgccla49l43rkmjcfrwlqdr65mg5syzcxrh7nh"; depends=[boot KernSmooth]; }; gbRd = derive2 { name="gbRd"; version="0.4-11"; sha256="06x97rw5i6v6cgjxkfhxnw4dn7lghn5q6ra7ri5ag1x9dkfzcl82"; depends=[]; }; gbm = derive2 { name="gbm"; version="2.1.3"; sha256="0ayrpq5qm18dsain088mbw0037bijxcy342grb6g2qnp67llpwpa"; depends=[lattice survival]; }; gbm2sas = derive2 { name="gbm2sas"; version="2.1"; sha256="0ssjlv849vssmncn01ccpp2myqib5f3g88g0d4rqma2z0ivdpk23"; depends=[gbm]; }; @@ -6588,7 +6709,7 @@ in with self; { gee = derive2 { name="gee"; version="4.13-19"; sha256="14n2fa2jmibw5j8n4qgbl8xbxhapmx4z3zrmkbcci39k9dsyplzb"; depends=[]; }; gee4 = derive2 { name="gee4"; version="0.1.0.0"; sha256="1vvzb9sc69g292zmh9djd15jgc7falypd5p7mzw6ps7mirpbnicf"; depends=[Formula Rcpp RcppArmadillo]; }; geeM = derive2 { name="geeM"; version="0.10.0"; sha256="0bk99kwh6xapkaxc3yis5x3d49j7pb45hq4ksbmkhz6ba21c4sn5"; depends=[Matrix]; }; - geecure = derive2 { name="geecure"; version="1.0-2"; sha256="0y3h079hyr8p6i0hyf0zzkbfds36zz782ffiw18w7qavnj70yj98"; depends=[geepack MASS Matrix survival]; }; + geecure = derive2 { name="geecure"; version="1.0-6"; sha256="0nmnrkfgblv38qvk66bdk8933icr59mayqwljkvmpy59sm6br2k5"; depends=[geepack MASS Matrix survival]; }; geepack = derive2 { name="geepack"; version="1.2-1"; sha256="13fkz38rsdk1byv6rdpdmphz5dd31r4h8ms49hali6hjh5rydzvy"; depends=[]; }; geesmv = derive2 { name="geesmv"; version="1.3"; sha256="0gm953z8q5cc1adl3d6vj5djg2inc880zfcdl5gd56fnb5gl6h1w"; depends=[gee MASS matrixcalc nlme]; }; geex = derive2 { name="geex"; version="1.0.3"; sha256="0px197mz3qfx7s4wfdjlgjpss03y7wid1qa34xf4xan05dnrrnzc"; depends=[lme4 Matrix numDeriv rootSolve]; }; @@ -6600,6 +6721,7 @@ in with self; { gems = derive2 { name="gems"; version="1.1.1"; sha256="174mjnpldb0rwjvwdgpcg1acm526gs0pjf9gi5mn9d3x9yz4r5jx"; depends=[data_table MASS msm plyr]; }; gemtc = derive2 { name="gemtc"; version="0.8-2"; sha256="0c2a9gz6rvsc5qh66ixxa4dz6lwhcmmsf2vnvxl98c9kbvdwfqm9"; depends=[coda igraph meta plyr Rglpk rjags truncnorm]; }; genBaRcode = derive2 { name="genBaRcode"; version="1.0.0"; sha256="0313kyhy9bg9rabxk2jdgxq2brhj2kkiq0xyd3mlq6j9c626pqi8"; depends=[ape Biostrings ggnetwork ggplot2 igraph network phangorn RColorBrewer reshape2 S4Vectors shiny ShortRead stringdist visNetwork]; }; + genBart = derive2 { name="genBart"; version="1.0.1"; sha256="12z5vj41npwawz954zqkjfmg9inh063ilh7m82pn73asrxif0ay3"; depends=[clValid data_table fastcluster ggplot2 gtools limma NMF pca3d psych qusage RColorBrewer reshape2 rmarkdown scales shiny shinydashboard shinyjs statmod stringr VennDiagram]; }; genMOSS = derive2 { name="genMOSS"; version="1.2"; sha256="18qinckzz7wsw222skrq30izbj6s85i8hq6iicj9nng8gh6jydr8"; depends=[ROCR]; }; genMOSSplus = derive2 { name="genMOSSplus"; version="1.0"; sha256="1n3ngx1piy3l14k5k95wrgvrjw9238jkygfqanl3xg2na2mmkr26"; depends=[]; }; genSurv = derive2 { name="genSurv"; version="1.0.3"; sha256="0k5rfpq603szjb76gxffvsbqcav8182h8zwvg4kar68k72yfw1xs"; depends=[]; }; @@ -6608,7 +6730,7 @@ in with self; { gencve = derive2 { name="gencve"; version="0.3"; sha256="00wbmaffm7mbfv3zl6mb24w1df1a8p24girwdh3a522lw3045iwf"; depends=[C50 class e1071 glmnet lars MASS nnet plus randomForest rpart]; }; gendata = derive2 { name="gendata"; version="1.1"; sha256="1r5bhmfblhk6d31v0byhp4a0pmpri6vk697zmmx9b0hvhda7mllf"; depends=[]; }; gender = derive2 { name="gender"; version="0.5.2"; sha256="1kd5024z9mbyiwmj7rpn7zflmpw6jsj2sz153g3ckzyhxjbc3x36"; depends=[dplyr httr jsonlite]; }; - genderBR = derive2 { name="genderBR"; version="1.0.1"; sha256="1sbxp0wz138xxcv31xz411gp7krzghvfmjfg5hmv66l8014s6s6c"; depends=[dplyr httr jsonlite]; }; + genderBR = derive2 { name="genderBR"; version="1.1.0"; sha256="0j5wsbv797wc48lc65yhaqhpwqyr662460vj59x7r9p7d7m1ncd0"; depends=[dplyr httr jsonlite]; }; genderizeR = derive2 { name="genderizeR"; version="2.0.0"; sha256="0r9r5x93zr58sfrww3l2vyvjyj8lir2yds08y6dzf88rs9v15w3c"; depends=[data_table httr magrittr stringr tm]; }; gendist = derive2 { name="gendist"; version="1.0"; sha256="0n3ax7iy40ymrxhmb88w31a4aacaps9f1iild42afin7i7vy4dq9"; depends=[]; }; geneListPie = derive2 { name="geneListPie"; version="1.0"; sha256="0z2gawfzhm05dafj4zlj6ifmf0dy7p1hrpa59lzxrnrc0wr6laji"; depends=[]; }; @@ -6625,9 +6747,10 @@ in with self; { genie = derive2 { name="genie"; version="1.0.4"; sha256="0ymrn42ik0rfildmyq4z0gsd7injda0dsjgx69nqb6hq0x8s5hqa"; depends=[Rcpp]; }; geniusr = derive2 { name="geniusr"; version="1.0.0"; sha256="0akz6hkw9mjwgx9s9j24j5l1z4q41kbhna2245l26ymn4cf0rwjc"; depends=[httr purrr rvest stringr tibble xml2]; }; genlasso = derive2 { name="genlasso"; version="1.3"; sha256="1q4ybg8xzphnqwywwdb7i2q94dlxwpggvisjqqdj39jh2cabda57"; depends=[igraph MASS Matrix]; }; - genlogis = derive2 { name="genlogis"; version="0.5.0"; sha256="0ybbfm9znkm52kin4f8dxb63rn6b91zsa31baw1lgczh41yswg3r"; depends=[distr doParallel foreach ggplot2 manipulate]; }; + genlogis = derive2 { name="genlogis"; version="1.0.0"; sha256="01av5invhviii7adqihh10ib47rjzwfsqdgw3lfg1c72kzrqywgr"; depends=[distr doParallel foreach ggplot2 manipulate]; }; geno2proteo = derive2 { name="geno2proteo"; version="0.0.3"; sha256="1q054ai42f5gmrj791abj02f663zs7ymdh3pfs3b2lq6i4w9s2fb"; depends=[BiocGenerics GenomicRanges IRanges R_utils RUnit S4Vectors]; }; genoPlotR = derive2 { name="genoPlotR"; version="0.8.7"; sha256="1zplk0acismv4x528rmmg5jcv6ng6c4vjf5h0mr124fj3kizsrg0"; depends=[ade4]; }; + genogeographer = derive2 { name="genogeographer"; version="0.1.8"; sha256="1sawxazfyi29h27lyrkkg0cqirmca59387z77r2jamcj6yx4lpxg"; depends=[dplyr DT forcats ggplot2 knitr leaflet magrittr purrr readr rio rmarkdown shiny shinycssloaders shinyjs tibble tidyr]; }; genomeplot = derive2 { name="genomeplot"; version="1.0"; sha256="15v01ngxq7kxav1bhw1mvqradrmvwsad5xh9l5skivb5smh9795w"; depends=[ggplot2]; }; genomic_autocorr = derive2 { name="genomic.autocorr"; version="1.0-1"; sha256="1lidrjz1flxw4jvhqdi8y813m7ss4kkvm7bxsdpz60dxxw3204gm"; depends=[data_table magrittr reshape]; }; genomicper = derive2 { name="genomicper"; version="1.6"; sha256="12msl6syw5a3dvxg9fr1yprcpb9qwn8v2dvkpxgagal11p9q1kx7"; depends=[DBI]; }; @@ -6636,6 +6759,7 @@ in with self; { genridge = derive2 { name="genridge"; version="0.6-6"; sha256="1hqarvd767h2vbjqfjzdr0548hxj87kv1073hfqyq5fybdlzsjx3"; depends=[car]; }; gensemble = derive2 { name="gensemble"; version="1.0"; sha256="0yyi7djzqx4yhxp6yy1rjgvzidjlna79ds89bgj6m6zj3aav6yw2"; depends=[]; }; gensphere = derive2 { name="gensphere"; version="1.1"; sha256="1xzli40fw94n89cv2qyb321csad1w9zidqc226wlifl2m44cw6f7"; depends=[geometry mvmesh rgl SimplicialCubature SphericalCubature]; }; + gensvm = derive2 { name="gensvm"; version="0.1.0"; sha256="19qd67x3j0b60wsbinjny7jwx5yh8hdk6387fl64frnq8fvi9d60"; depends=[]; }; geo = derive2 { name="geo"; version="1.4-3"; sha256="0yxlafm99ypwf1700nh3hnnpndb6ghwwbi5sp6715zjbkkx94482"; depends=[mapdata maps]; }; geoBayes = derive2 { name="geoBayes"; version="0.3.3"; sha256="1jw0fj39gzf4cislc889ndgj34svcdxk0jz85ssk936g9gp0mm0c"; depends=[coda sp]; }; geoCount = derive2 { name="geoCount"; version="1.150120"; sha256="1kcjqls91r6p8ykn901c5p3v2lzbyainahhjpnr5c3a57v8s73ms"; depends=[Rcpp RcppArmadillo]; }; @@ -6645,14 +6769,15 @@ in with self; { geoSpectral = derive2 { name="geoSpectral"; version="0.17.4"; sha256="0i2k5k66gmf7zvipcd0a489rnpj14j4a4xw9k5dccpj6ybwd47l7"; depends=[dplyr leaflet maps plotly rbokeh rgdal sp spacetime xts]; }; geoaxe = derive2 { name="geoaxe"; version="0.1.0"; sha256="043y7kb24hp66j7pnpqsdixvdmppwp72y8i4f8q7xrkhaqlfb93v"; depends=[jsonlite rgeos sp]; }; geoelectrics = derive2 { name="geoelectrics"; version="0.1.5"; sha256="0zy9m5k4b359mn29cd62cnwjm4fc19hy3l8p587yrrhsi20nbyna"; depends=[fields lattice rgl]; }; - geofacet = derive2 { name="geofacet"; version="0.1.5"; sha256="1fx7qgvyqkm8728ai1nd7kgj295q46jlps56zwvlvlzhqy437p5n"; depends=[ggplot2 gtable]; }; + geofacet = derive2 { name="geofacet"; version="0.1.9"; sha256="0z9xd24hn9j8azd4kal81lz72zy6vv9rvwx1jsmkq7z7f1wwly48"; depends=[geogrid ggplot2 ggrepel gridExtra gtable imguR rnaturalearth sp]; }; geofd = derive2 { name="geofd"; version="1.0"; sha256="16312g9mgw52mpsfky1j20zcqkkv91ihl0xhvv1bl80diffzf0zi"; depends=[fda geoR]; }; geogrid = derive2 { name="geogrid"; version="0.1.0"; sha256="1aiar70cy8rf7hc7kwc2g3p02x3zmp6nf9vfjjrjm94mb7yr8s48"; depends=[Rcpp RcppArmadillo rgeos sf sp]; }; geohash = derive2 { name="geohash"; version="0.3.0"; sha256="1yabnf0a6jd4r6zh83sxb9wcn4vs8csp7c80qs6pi1nx016lirx7"; depends=[Rcpp]; }; geojson = derive2 { name="geojson"; version="0.2.0"; sha256="1xvbkdaaf55x015pflvcdy06ayrmhqi3my0sdqb48z129rdbr3i7"; depends=[jqr jsonlite lazyeval magrittr protolite sp]; }; geojsonR = derive2 { name="geojsonR"; version="1.0.4"; sha256="0248lb1kgj43czp5z4q7dcrq6ra0jhq62q9x79mgyb83bqn940h8"; depends=[R6 Rcpp RcppArmadillo]; }; - geojsonio = derive2 { name="geojsonio"; version="0.5.0"; sha256="1ywrzjksiim7xhjywhjmp6s3dalqyzh1948xr8958ahpbk242252"; depends=[geojson httr jqr jsonlite magrittr maptools readr rgdal rgeos sp V8]; }; + geojsonio = derive2 { name="geojsonio"; version="0.6.0"; sha256="10vi40ppy65yg655xy0j8zl6icn7d7icwfj4a84wpp28pd1bwic8"; depends=[geojson httr jqr jsonlite magrittr maptools readr rgdal rgeos sf sp V8]; }; geojsonlint = derive2 { name="geojsonlint"; version="0.2.0"; sha256="05j7059s1hs8i2fkmkv0mqmda3bgk5zbyi865ab0vl361wiwmdya"; depends=[httr jsonlite jsonvalidate V8]; }; + geojsonsf = derive2 { name="geojsonsf"; version="0.2.0"; sha256="1jc0dgxk4zlrwy6a3y2j87a7vk9w8cnmczhaf0jdw6xymmni1faw"; depends=[rapidjsonr Rcpp]; }; geoknife = derive2 { name="geoknife"; version="1.5.5"; sha256="0azb98zk4ayfm0z9vz5h59490xvng16p3gpdn60ca9mwdikyxks3"; depends=[curl httr sp XML]; }; geomapdata = derive2 { name="geomapdata"; version="1.0-4"; sha256="1g89msnav87kim32xxbayqcx1v4439x4fsmc8xhlvq4jwlhd5xxw"; depends=[]; }; geomedb = derive2 { name="geomedb"; version="0.2"; sha256="1nsf7xzqayk8zbw3b6xpgiqk2w2kzc896gjswzxq128xw05cia0a"; depends=[ape httr]; }; @@ -6662,7 +6787,7 @@ in with self; { geomnet = derive2 { name="geomnet"; version="0.2.0"; sha256="0xanzx8p34bac4zcf9j69nivwhllvsrw7x70mzgl95jhg3gvv96a"; depends=[dplyr ggplot2 network plotly readr sna tidyr]; }; geomorph = derive2 { name="geomorph"; version="3.0.5"; sha256="015ijpmx44agmr2ddwgxy5rs1rhkxr6j6dh5wzksaw1p4mxmhfks"; depends=[ape geiger jpeg Matrix rgl]; }; geonames = derive2 { name="geonames"; version="0.998"; sha256="1p0x260i383ddr2fwv54pxpqz9vy6vdr0lrn1xj7178vxic1dwyy"; depends=[rjson]; }; - geoops = derive2 { name="geoops"; version="0.1.2"; sha256="1p2nc6lhqvnxs4l8k0kyqb7mjigaycjms61139sd39qs6wy7cnvp"; depends=[Rcpp]; }; + geoops = derive2 { name="geoops"; version="0.1.8"; sha256="1n863z83y19bn97clfddhv009c8d6a1grya0q5pk0a6ylihcw11h"; depends=[Rcpp]; }; geoparser = derive2 { name="geoparser"; version="0.1.1"; sha256="0rk2wcig79r28a974bc181p8vypxzbgxcb9rsp24qj9mg02rn5n5"; depends=[digest dplyr httr jsonlite lazyeval purrr stringr tidyr]; }; geophys = derive2 { name="geophys"; version="1.4-1"; sha256="1s64sbr0chv0z2vaw059khfkv8iga1kr6428kkglgafq5x2d6h3q"; depends=[cluster GEOmap RFOC RPMG RSEIS]; }; georob = derive2 { name="georob"; version="0.3-6"; sha256="01gq9ymqk3zyjs5n7nj27ky2bnhc7x7npbipa5bcq7jda6gxirhr"; depends=[abind constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; }; @@ -6672,7 +6797,7 @@ in with self; { geosphere = derive2 { name="geosphere"; version="1.5-7"; sha256="186qdm5niq7v3d4w4rngx71znsgi44hnam7698bsx9ar5mg5b6wx"; depends=[sp]; }; geospt = derive2 { name="geospt"; version="1.0-2"; sha256="1814nn0naxvbn0bqfndpmizjbqcs6rm87g2s378axkn6qpii4bh8"; depends=[fields genalg gsl gstat limSolve MASS minqa plyr sgeostat sp TeachingDemos]; }; geosptdb = derive2 { name="geosptdb"; version="0.5-0"; sha256="0m0dlazhq2za71mi3q8mz2zvz7yrmda7lha02kh9n820bx89v33z"; depends=[FD fields geospt gsl limSolve minqa sp StatMatch]; }; - geostatsp = derive2 { name="geostatsp"; version="1.6.0"; sha256="12lkmwfg4wqmc13xzsmgc1g624v2kpacxpycwlcafr60rbix6f9w"; depends=[abind Matrix numDeriv raster sp]; }; + geostatsp = derive2 { name="geostatsp"; version="1.7.1"; sha256="141mvwkqk2jpyggmzvm604s37h92gbmzch3d84dq3ng29mc507s2"; depends=[abind Matrix numDeriv raster sp]; }; geotech = derive2 { name="geotech"; version="1.0"; sha256="18s7w6h1svc4n1hcgj5njfkf3nflkc53cdwsq5112p3442rlz33f"; depends=[]; }; geotools = derive2 { name="geotools"; version="0.1"; sha256="0d0vf9dvrrv68ivssp58qzaj8vra26ms33my097jmzmgagwy1spd"; depends=[]; }; geotoolsR = derive2 { name="geotoolsR"; version="1.0"; sha256="1arbyb1q96ya3smn9sqzqji5v21x37iyyxmvlmqmjj75an8ix5dp"; depends=[dplyr geoR ggplot2 tidyr]; }; @@ -6680,6 +6805,7 @@ in with self; { geozoning = derive2 { name="geozoning"; version="1.0.0"; sha256="0cqdi2jgqrxc339qkr57dp11jp40x99f9inwamnh7ymg2q7kq14s"; depends=[deldir fields ggplot2 gstat maptools RandomFields raster rgeos sp]; }; geozoo = derive2 { name="geozoo"; version="0.5.1"; sha256="0g91yhg7zw1bp0lxxblr2irckjg2rl4pg1vgglccnmxkzn0ji2qi"; depends=[bitops]; }; gepaf = derive2 { name="gepaf"; version="0.1.1"; sha256="0n36w40jrq3qkgmhz9wrnhp6fczw7bm96g950sa4nq33872xhfgm"; depends=[bitops]; }; + germinationmetrics = derive2 { name="germinationmetrics"; version="0.1.0"; sha256="1s6mygiwmz2cgg2dcsah4ssnj5hfilf7hfdzvv3qd57imicrlkk5"; depends=[broom ggplot2 ggrepel minpack_lm plyr Rdpack]; }; gesca = derive2 { name="gesca"; version="1.0.4"; sha256="1ndn8wgp22pr017x6v7jw8jy4gd06x8110qa860hw8i6pn47wfwv"; depends=[]; }; gesis = derive2 { name="gesis"; version="0.2.1"; sha256="1cdmhfdjiwsp48a7b0r1mnagnymz606mkzpam9fsvfl72vzji2w7"; depends=[httr rvest xml2]; }; getCRUCLdata = derive2 { name="getCRUCLdata"; version="0.2.2"; sha256="14rw7pdcan4bdjfb16z3h0acx2s8l34vywsp4nn8l1pmmsvgqpap"; depends=[data_table dplyr hoardr httr raster tibble tidyr]; }; @@ -6689,16 +6815,17 @@ in with self; { getlandsat = derive2 { name="getlandsat"; version="0.1.0"; sha256="0h2520r5sqyzsajqw2i86byw9zm5za27mhjkrzzw5vr5sh1vdiwb"; depends=[data_table httr rappdirs readr tibble xml2]; }; getmstatistic = derive2 { name="getmstatistic"; version="0.1.1"; sha256="14w0n658s624anvxv7sqcgy6vfaaxcc7fj4xi1k2qrxd9rdh6dza"; depends=[ggplot2 gridExtra gtable metafor psych stargazer]; }; getopt = derive2 { name="getopt"; version="1.20.2"; sha256="13p35lbpy7i578752fa71sbfvcsqw5qfa9p6kf8b5m3c5p9i4v1x"; depends=[]; }; - gets = derive2 { name="gets"; version="0.14"; sha256="01pdpw56q27ihqyp58f0rsggqaqzay74ah1lwi54y7kcyw09yq5w"; depends=[zoo]; }; + gets = derive2 { name="gets"; version="0.15"; sha256="1sz225bymjp2mrklpjagh6x622kpcvh21r0rmimd1mjhqbg0p9vs"; depends=[zoo]; }; gettingtothebottom = derive2 { name="gettingtothebottom"; version="3.2"; sha256="1cz2vidh7k346qc38wszs2dg6lvya249hvcsn6zdpbx0c0qs3y72"; depends=[ggplot2 Matrix]; }; gettz = derive2 { name="gettz"; version="0.0.3"; sha256="1i06nfm824131q8lwwhrbzg2g9lbnmyp8k57w2vag7v8jj5rdrda"; depends=[]; }; gfcanalysis = derive2 { name="gfcanalysis"; version="1.4"; sha256="1hjgbiakf01mmaa2jhlnymcsjsj1zssay44p4sdxxxzpx4szs3vv"; depends=[animation geosphere ggplot2 plyr raster rasterVis RCurl rgdal rgeos sp stringr]; }; gfer = derive2 { name="gfer"; version="0.1.10"; sha256="1y0ra8k7zka43ibiii16vbwnc3m1i77yc9zj8rhzhmvhajjwad3l"; depends=[circlize data_table ggplot2 ggrepel googlesheets gsheet httr jsonlite rvest scatterpie stringi tidyr V8 xml2]; }; - gfmR = derive2 { name="gfmR"; version="1.0-1"; sha256="1irzkiq93wh4yphq8x1v2a7plcrskb8fs36qjaa0qhyhvhn0f57i"; depends=[faraway nnet]; }; + gfmR = derive2 { name="gfmR"; version="1.1-0"; sha256="0qzzbcra1fnbp0h31b1as20yhmqmi7p62xrhikj64an9avg9b277"; depends=[faraway nnet]; }; ggChernoff = derive2 { name="ggChernoff"; version="0.2.0"; sha256="09bh9isvx3hwwvg72fv6z3fvp8dimpbhvbp328z8amq8jjhph4vf"; depends=[ggplot2 scales]; }; - ggExtra = derive2 { name="ggExtra"; version="0.7"; sha256="0vygac13cjcq63f57zd28jyla09za58r77kq1mmsa4qx4dxyfsbl"; depends=[colourpicker ggplot2 gtable miniUI shiny shinyjs]; }; + ggExtra = derive2 { name="ggExtra"; version="0.8"; sha256="1m5zpn3l3p1y3d2692gyz50m63d58m2a3b7zb595kvcffdx2qr5b"; depends=[colourpicker ggplot2 gtable miniUI scales shiny shinyjs]; }; ggFacetSample = derive2 { name="ggFacetSample"; version="1.0.0"; sha256="04h5j54wblrygiscvb6n40b9lz42ssds1yz9qs5hxppiph68k5zq"; depends=[ggplot2 plyr]; }; ggQC = derive2 { name="ggQC"; version="0.0.2"; sha256="1wi9hb5ihix2vfpzbhpq2clbs7c0qh84qbmdfcxw4lknb0ha9ai1"; depends=[dplyr ggplot2 tidyr]; }; + ggQQunif = derive2 { name="ggQQunif"; version="0.1.5"; sha256="0vrxmqxy946mwdq0mb2m1ch41r0chrw7hcn18dr3mp10bv7pl7wj"; depends=[dplyr ggplot2 scales]; }; ggROC = derive2 { name="ggROC"; version="1.0"; sha256="0p9gdy7ia59d5m84z9flz5b03ri7nbigb3fav2v2wrml300d24vn"; depends=[ggplot2]; }; ggRandomForests = derive2 { name="ggRandomForests"; version="2.0.1"; sha256="0f8m0j79d8wbac14zk1s8812rz6vgf04bz1iqq8p4d3sxwnvaj7q"; depends=[ggplot2 randomForest randomForestSRC survival tidyr]; }; ggThemeAssist = derive2 { name="ggThemeAssist"; version="0.1.5"; sha256="1biw91a8p13h62v4w3yim6ghr98khmyhb3qd0h04asf91vvmpxbv"; depends=[formatR ggplot2 miniUI rstudioapi shiny]; }; @@ -6707,25 +6834,26 @@ in with self; { ggalt = derive2 { name="ggalt"; version="0.4.0"; sha256="0ssa274d41vhd6crzjz7jqzbwgnjimxwxl23p2cx35aqs5wdfjpc"; depends=[ash dplyr extrafont ggplot2 gtable KernSmooth maps MASS plotly proj4 RColorBrewer scales tibble]; }; ggbeeswarm = derive2 { name="ggbeeswarm"; version="0.6.0"; sha256="0crk29p5vi1r3a988kms4y7r0iqwgwzsikgvh18r9wbzyr98bb5v"; depends=[beeswarm ggplot2 vipor]; }; ggbuildr = derive2 { name="ggbuildr"; version="0.1.0"; sha256="0pld635v6fv46ky7s4icwxlcnr7z6bp5ikf20adpkljwhy0wwxak"; depends=[ggplot2 purrr readr]; }; - ggconf = derive2 { name="ggconf"; version="0.1"; sha256="1h7z4amlycfddisf8ix5kmax56ix8hdllfn77rf4fs5sbqsqxkdm"; depends=[ggplot2 rly tibble]; }; + ggconf = derive2 { name="ggconf"; version="0.1.3"; sha256="0g4xasqhdiqfqahakv6p5npl56f2iakx4bnc9v9zcjr077kdda4n"; depends=[ggplot2 rly]; }; ggcorrplot = derive2 { name="ggcorrplot"; version="0.1.1"; sha256="04jq1qpsgy8bgpilp1a02va4vz0adkjwrz9znmhv54q81qiv7h51"; depends=[ggplot2 reshape2]; }; + ggdag = derive2 { name="ggdag"; version="0.1.0"; sha256="0ja3v8pmlzl55n8y8n9zcg5n17w8w4vdq42bqf6h8hgyqj63rcg9"; depends=[dagitty dplyr forcats ggforce ggplot2 ggraph ggrepel igraph magrittr plyr purrr stringr tibble tidygraph]; }; ggdendro = derive2 { name="ggdendro"; version="0.1-20"; sha256="1zzq1hxd0d1qa5hrzwfkdw6fzscpcafbwbpkrb62dm559y8awp0j"; depends=[ggplot2 MASS]; }; ggdmc = derive2 { name="ggdmc"; version="0.1.3.9"; sha256="07a9g6kwq4hg5zlcxndwmyprl3di7fzsn2960qyixn5bzrfk7sh2"; depends=[coda ggmcmc ggplot2 ggthemes gridExtra loo Rcpp RcppArmadillo rtdists]; }; gge = derive2 { name="gge"; version="1.3"; sha256="0bqclmm4jr7y52n7qh4jikd0804iccjdpy55bvbc2k8ypsp2biik"; depends=[nipals reshape2 rgl]; }; ggedit = derive2 { name="ggedit"; version="0.2.1"; sha256="0l2ryp8xcyqsgfcywr3y6c2y8j42c15dyrcmfhfimbzy52bmnqxy"; depends=[colourpicker dplyr ggplot2 miniUI plyr reshape2 rstudioapi scales shiny shinyAce shinyBS]; }; - ggeffects = derive2 { name="ggeffects"; version="0.3.1"; sha256="04wmyrs1pzdv120w7pq2g0x51h061lj27p42gaxfcrzdbplvrwv1"; depends=[dplyr effects ggplot2 magrittr prediction purrr rlang scales sjlabelled sjmisc sjstats tibble tidyr tidyselect]; }; + ggeffects = derive2 { name="ggeffects"; version="0.3.2"; sha256="07xrbl8z5ap5yy40wdz4gcwmmmj66c01qv8jdn0smjf06xavbr0n"; depends=[dplyr effects ggplot2 magrittr prediction purrr rlang scales sjlabelled sjmisc sjstats tibble tidyr tidyselect]; }; ggenealogy = derive2 { name="ggenealogy"; version="0.3.0"; sha256="169zkcp13g0ll9941a7hh31fll0mavnkb6fd3kvkibdjm621ymyh"; depends=[ggplot2 igraph plotly plyr reshape2 tibble]; }; ggfan = derive2 { name="ggfan"; version="0.1.1"; sha256="0sqf37afz9kpl2wm3cpansav9ndil8agwrblzj0fhnyrj41s148n"; depends=[colorspace dplyr ggplot2 rstan]; }; ggfittext = derive2 { name="ggfittext"; version="0.5.0"; sha256="0ih6mqg53y5iaiq003wbzp6qqx4844yh5z9zw5d0k7gqclprmpn5"; depends=[ggplot2 stringi]; }; ggforce = derive2 { name="ggforce"; version="0.1.1"; sha256="0y49anv5sj1qn1ifcxg1krkkv4z3dlan5lya36vfmzzdamfgq5p6"; depends=[dplyr ggplot2 gtable lazyeval MASS Rcpp scales tweenr units]; }; ggformula = derive2 { name="ggformula"; version="0.6.2"; sha256="08smdd3s8dh3qjcm25v8h1r8pfvlfvkymnbhlyw4bymq479g4w0j"; depends=[ggplot2 magrittr mosaicCore rlang stringr tibble]; }; - ggfortify = derive2 { name="ggfortify"; version="0.4.3"; sha256="031fq82g7n9r9mvvh1sqbhq8m0swkha0vl78rkgkmzbrp88lkvqg"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; }; + ggfortify = derive2 { name="ggfortify"; version="0.4.4"; sha256="12fzf04yqxz0297pq4cpbnxal1vdmibi9nfcmzq5g35diypqwmg9"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; }; gggenes = derive2 { name="gggenes"; version="0.2.0"; sha256="1s3lkdl9wmhcdra90bv8zzb16h2sdmpr15x8c3d0gfw7yir6prj2"; depends=[ggplot2]; }; ggghost = derive2 { name="ggghost"; version="0.2.1"; sha256="0kvsjadxxdf6yvzk4a6yqkg02q1ysslvf3m0a369bdim396z4hnv"; depends=[animation ggplot2]; }; ggguitar = derive2 { name="ggguitar"; version="0.1.1"; sha256="1lmfs54h91gzcxin37v4flkywbq3fs648mm1h9ak03xlj5nagzsi"; depends=[dplyr ggplot2 gridExtra lazyeval readr tibble]; }; gghalfnorm = derive2 { name="gghalfnorm"; version="1.1.2"; sha256="1sy0m6pqmnjbqv60rljyblhis0dxwkhw751jhlad5arcgrcwf4k8"; depends=[ggplot2 ggrepel]; }; gghighlight = derive2 { name="gghighlight"; version="0.0.1"; sha256="12by8q31fl2kc6w5p72wvd2nxg1cpvhgdbais6hjly1sxi8jd6zp"; depends=[dplyr ggplot2 ggrepel magrittr purrr rlang]; }; - ggimage = derive2 { name="ggimage"; version="0.1.0"; sha256="1kh8r859bayrha96b5wyfncbns2qw49v5kfai1jx66w89x3bsr7h"; depends=[ggplot2 gridGraphics magick rvcheck scales tibble]; }; + ggimage = derive2 { name="ggimage"; version="0.1.4"; sha256="0bwzzd7f4knjg7jifsmqwbd0kbca1n5f8f4s068d6mahaff5d9mn"; depends=[base2grob ggplot2 gridGraphics magick rvcheck scales tibble]; }; ggiraph = derive2 { name="ggiraph"; version="0.4.2"; sha256="0bk6q0psxzggm69yyhfw047xyygp23rk63xvdd9dv6avndfn1h7n"; depends=[ggplot2 htmltools htmlwidgets rvg xml2]; }; ggiraphExtra = derive2 { name="ggiraphExtra"; version="0.1.0"; sha256="09fiwkaai4sy5kxy4p0c4ldb8ya63czff53hbm6d8fm858fw2byw"; depends=[ggiraph ggplot2 mapproj mgcv moonBook mycor plyr reshape2 scales XML]; }; ggjoy = derive2 { name="ggjoy"; version="0.4.0"; sha256="1s24zn7gmk52bvjjhanxby7rxbnc2yfl0nx5nv7x7z0zja8gg7nb"; depends=[ggplot2 ggridges]; }; @@ -6752,7 +6880,7 @@ in with self; { ggraph = derive2 { name="ggraph"; version="1.0.1"; sha256="0sm1hf2fjfia0s8m5b1x6pi8wvww77rpck86clpa2figwvck8jqr"; depends=[digest dplyr ggforce ggplot2 ggrepel gtable igraph MASS plyr Rcpp scales viridis]; }; ggraptR = derive2 { name="ggraptR"; version="1.0"; sha256="1n3ildrm8jh6m1j8njx1icbjhpkv3d2ndx59d6ddyg4np09cmp8w"; depends=[assertthat backports colorspace colourpicker DBI dplyr DT evaluate futile_logger futile_options gdtools GGally ggplot2 ggthemes gtable htmltools htmlwidgets httpuv labeling lambda_r lazyeval magrittr miniUI munsell plyr RColorBrewer Rcpp reshape rmarkdown rprojroot scales shiny shinyBS shinyjs stringi stringr svglite tibble xtable yaml]; }; ggrepel = derive2 { name="ggrepel"; version="0.7.0"; sha256="0g0qfm6g71rv27423c1x846ipilnj213knyzrcr09vrpxc87l618"; depends=[ggplot2 Rcpp scales]; }; - ggridges = derive2 { name="ggridges"; version="0.4.1"; sha256="0kfa3icqdalqdg1klxjrhfl7if35d3wnsiyl86bprw5dyqyh3lh3"; depends=[ggplot2 plyr scales]; }; + ggridges = derive2 { name="ggridges"; version="0.5.0"; sha256="1znvsbl3px8dddpjgdrygnpz4s685wizi0jnjvx2hrz58i0chjqj"; depends=[ggplot2 plyr scales withr]; }; ggsci = derive2 { name="ggsci"; version="2.8"; sha256="1s2asx9aprpzs6xqbl7yb1dv9ci9ivwqcq46fzvys8zgwzf7mkml"; depends=[ggplot2 scales]; }; ggseas = derive2 { name="ggseas"; version="0.5.1"; sha256="1r23j701rvia49si42fbi6zws7x9r92h1bcp0a15h28hpl7zlp7l"; depends=[ggplot2 seasonal zoo]; }; ggseqlogo = derive2 { name="ggseqlogo"; version="0.1"; sha256="13q6kcpxrqxqbji889fx63p0nsi08lk5yymkchig75r5k1d18ky1"; depends=[ggplot2]; }; @@ -6761,9 +6889,10 @@ in with self; { ggspatial = derive2 { name="ggspatial"; version="0.2.1"; sha256="11vminz4kwv1ny4v9h23sp7j7d45q6v4804xv9fp04qgzbzi9lv8"; depends=[abind ggplot2 maptools plyr raster reshape2 rgdal rosm scales sp]; }; ggspectra = derive2 { name="ggspectra"; version="0.2.3"; sha256="11y2vlcpxyh56pdfzz11bkip2nxv6rrwscqv48p5fvgn9sllly4q"; depends=[dplyr ggplot2 ggrepel lubridate photobiology photobiologyWavebands reshape2 scales tidyr]; }; ggstance = derive2 { name="ggstance"; version="0.3"; sha256="0sr84nasr8x8ib3mdsjck73gbfg9xba50s5nxdij0ah9xqnpyhpi"; depends=[ggplot2 lazyeval plyr purrr]; }; + ggstatsplot = derive2 { name="ggstatsplot"; version="0.0.1"; sha256="07fpavl7735a7fhaiybf55125afs40ai8sag32xxsf8d24i5zl2s"; depends=[apaTables broom coin cowplot crayon DescTools dplyr effsize ggcorrplot ggExtra ggplot2 ggrepel gtable jmv magrittr MASS nortest purrr rlang RVAideMemoire sfsmisc tibble tidyr userfriendlyscience WRS2]; }; ggswissmaps = derive2 { name="ggswissmaps"; version="0.1.1"; sha256="0is48x6k2p5dgj9q4km0dv33a9pcpfhlai9vz295y3acpyrkmnn4"; depends=[ggplot2]; }; ggtern = derive2 { name="ggtern"; version="2.2.1"; sha256="05dszysn1qr5s4ji4il91pv19xjh5yd09w9f153fmg4cyfl716iz"; depends=[compositions ggplot2 gridExtra gtable latex2exp lattice MASS plyr proto scales]; }; - ggthemes = derive2 { name="ggthemes"; version="3.4.0"; sha256="1jj8lp7jbk3489kpgbw4b5phpn01gkfmksc21c6sn3x6wmzyn6hs"; depends=[assertthat colorspace ggplot2 scales]; }; + ggthemes = derive2 { name="ggthemes"; version="3.4.2"; sha256="0i7ygpizs00acizixc29bhbrci523ys7vzxbii9b3bcmfa3pj7i3"; depends=[assertthat colorspace ggplot2 scales]; }; ggversa = derive2 { name="ggversa"; version="0.0.1"; sha256="0xqn8iznrm8q30pxwka88wi1z7lndi6lm12rq6ngcaxf294fbz01"; depends=[]; }; ggvis = derive2 { name="ggvis"; version="0.4.3"; sha256="1p7c8f83da30grj5n0v80p5djp6z0r62z5zqpv2a3ahn61w1gm9l"; depends=[assertthat dplyr htmltools jsonlite lazyeval magrittr shiny]; }; gh = derive2 { name="gh"; version="1.0.1"; sha256="1llinfajb0g7006jd2w1hpskxpmkjhnqarcjb71r1qvsccb2ph7k"; depends=[httr ini jsonlite]; }; @@ -6774,7 +6903,9 @@ in with self; { gibble = derive2 { name="gibble"; version="0.0.2"; sha256="0a9h3q0kwk9aagcpnmih59vbm5n7hdjpa4idwagky351almblmr6"; depends=[dplyr tibble]; }; gibbs_met = derive2 { name="gibbs.met"; version="1.1-3"; sha256="1yb5n8rkphsnxqn8rv8i54pgycv9p7x1xhinx4l5wzrds3xhf2dc"; depends=[]; }; gifti = derive2 { name="gifti"; version="0.7.5"; sha256="1y64bc33b5f64a4khp916s9zb7kbb24xgdg3pdlh0f8m6zrbmp4a"; depends=[base64enc R_utils xml2]; }; - gimme = derive2 { name="gimme"; version="0.3-2"; sha256="1k79c057024i59iccphzdkh0022dd4dv0vrpn3pvlw9px6j9fbz3"; depends=[igraph lavaan qgraph]; }; + gim = derive2 { name="gim"; version="0.11.0"; sha256="1psmziq03k1nbdl64sy152ih4g625qkbp5l7msfibrcbpgz0hg7y"; depends=[numDeriv]; }; + gimme = derive2 { name="gimme"; version="0.3-3"; sha256="0czms27yfv0iwwqljfpa21qx83282ky4misccbln4cxziyw1n7yz"; depends=[igraph lavaan qgraph]; }; + gimmeTools = derive2 { name="gimmeTools"; version="0.1"; sha256="1g170rz3c3qx27yy67f7xab4gkm0pbbvwlwkcsczfxphad609ryl"; depends=[easycsv magrittr miniUI rhandsontable rintrojs rstudioapi shiny shinyjs shinyWidgets]; }; gimms = derive2 { name="gimms"; version="1.1.0"; sha256="0mqffqvaapb0m0d50vg4kvdp67yq99qf54f5anwq4md0rf3x8lid"; depends=[curl Kendall ncdf4 raster RCurl zyp]; }; giphyr = derive2 { name="giphyr"; version="0.1.2"; sha256="1id3r291xyj1ylxgmw2cbazaz0jq4bksj8bijwagcawimfxibz45"; depends=[dplyr httr miniUI purrr rstudioapi shiny tibble]; }; gistr = derive2 { name="gistr"; version="0.4.0"; sha256="1q1wp3q3ppkclvw9fsc9pr5raqv2r9rdm2n8s197b8brfcjilxsi"; depends=[assertthat dplyr httr jsonlite knitr magrittr rmarkdown]; }; @@ -6784,7 +6915,7 @@ in with self; { gitlabr = derive2 { name="gitlabr"; version="0.9"; sha256="0i9sqqvn9xzknybsj9nmi6kclw8c35shy658li17455d28gv4653"; depends=[base64enc dplyr httr magrittr purrr stringr tibble yaml]; }; gitter = derive2 { name="gitter"; version="1.1.1"; sha256="10m4rs6mhg7xn8dfd41ai0bnn5bnxn6cgqip22hrrpj0i2lzky6l"; depends=[EBImage ggplot2 jpeg logging PET tiff]; }; givitiR = derive2 { name="givitiR"; version="1.3"; sha256="0y2slhxhj7k413kjaydin9hq3x2xgx4cgjshdplwnmg3x2nakn31"; depends=[alabama rootSolve]; }; - gjam = derive2 { name="gjam"; version="2.1.9"; sha256="05xi8wf1bp75irdklgxbx5clik0l1bpykl30hvda0dxp6qyrzm4w"; depends=[MASS RANN Rcpp RcppArmadillo]; }; + gjam = derive2 { name="gjam"; version="2.2.1"; sha256="0xjkssxgpcpn37amkjwi5cjdx5b8lkgjaw2lm4wyjjfn59jj3d14"; depends=[MASS RANN Rcpp RcppArmadillo]; }; gk = derive2 { name="gk"; version="0.5.1"; sha256="1hgxb1lp78pbnj22i7ryf46im301j05y7hh75z2fxvv5nqgg2v75"; depends=[Ecdat lubridate progress]; }; gkmSVM = derive2 { name="gkmSVM"; version="0.79.0"; sha256="04dakbgfvfalz4rm4fvvybp506dn5fbj5g86ybfhrc6wywjllsz3"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges kernlab Rcpp ROCR rtracklayer S4Vectors seqinr]; }; glacierSMBM = derive2 { name="glacierSMBM"; version="0.1"; sha256="0117fzz2b1lccs0kkwz59w2yysi72j54yvz7373pz11w7rjds84f"; depends=[raster sp udunits2]; }; @@ -6795,11 +6926,10 @@ in with self; { glba = derive2 { name="glba"; version="0.2"; sha256="0ckcz6v6mfbv34s8sp086czhb5l58sky79k84332rrz6wj47p3md"; depends=[]; }; glcm = derive2 { name="glcm"; version="1.6.1"; sha256="0xzfhafc7326v3g1xngp584039iknw3q3bcx8f0j4ig125in7sxk"; depends=[Rcpp RcppArmadillo]; }; gld = derive2 { name="gld"; version="2.4.1"; sha256="0ycm3w8s5bm5w2lqy0qa877cwjcwc9x1zyyyrknwwjjxip250iaw"; depends=[e1071 lmom]; }; - gldrm = derive2 { name="gldrm"; version="1.4"; sha256="0kjd78zpn65zs7nd2fqmm5qs6d0vyjyww93jgcx5ay5qpx83vyrv"; depends=[]; }; + gldrm = derive2 { name="gldrm"; version="1.5"; sha256="1mbdxqjw6sa47kigwrjq1gn6vi36zhg9j2lck144iwa10ms0y9xp"; depends=[]; }; glinternet = derive2 { name="glinternet"; version="1.0.7"; sha256="0kvhkhkhf5bmqvhxiz83cqw478s55gbkk3s2csa9bnz8ymkcn3f4"; depends=[]; }; gllm = derive2 { name="gllm"; version="0.35"; sha256="1m9asamh2yha9q8mrllvvc9qj2im6cspvfpafzc8krmh17zq4ins"; depends=[]; }; gllvm = derive2 { name="gllvm"; version="0.1.0"; sha256="13ca5ms6bbrj3ny5n438v5ma0d7ccnghysz7c8452cpdq8sn87iy"; depends=[fishMod MASS Matrix mvabund mvtnorm Rcpp RcppEigen statmod TMB]; }; - glm_ddR = derive2 { name="glm.ddR"; version="0.1.1"; sha256="123xqyw73l5lv746zvy2wjwr8xx6gpmwi5n86m8d05dj3bx02dzm"; depends=[ddR Matrix]; }; glm_deploy = derive2 { name="glm.deploy"; version="1.0.4"; sha256="1akklvbhz2pp0sv1hax1jq0s9ajbfv1597z643gh5l9hwizj2h9m"; depends=[Rcpp]; }; glm_predict = derive2 { name="glm.predict"; version="3.0-0"; sha256="1kqh8g7mrpfnzklk23x7ckbn5p2qcw951cg4s9gnlncggby864ig"; depends=[MASS nnet]; }; glm2 = derive2 { name="glm2"; version="1.1.3"; sha256="0mmvba1ccmykm2k02ysjbiqj1lwzdwrbxr1hq1kn1gl97xlarp2x"; depends=[]; }; @@ -6813,10 +6943,10 @@ in with self; { glmm = derive2 { name="glmm"; version="1.2.3"; sha256="0cxlcx09a5vypv6kkcfvfjdpz2rnxhay0pjv6q53hdmbshmchbmj"; depends=[digest Matrix mvtnorm trust]; }; glmmBUGS = derive2 { name="glmmBUGS"; version="2.4.0"; sha256="1clnnf0ja2xiqdgi2f1xs04hhi13rnp8jzzdjncbqbdzk2ic3ynl"; depends=[abind MASS sp]; }; glmmLasso = derive2 { name="glmmLasso"; version="1.5.1"; sha256="1az9vdnyqyrfn1q7zrn6x4ywx77b0vg65cni45x37b0ybkwpis39"; depends=[Matrix minqa]; }; - glmmML = derive2 { name="glmmML"; version="1.0.2"; sha256="0ndvp7a7dxq6ygdwzq783ci1y0zb4xwnj6g4w1cm8zvqak8dxjdb"; depends=[]; }; + glmmML = derive2 { name="glmmML"; version="1.0.3"; sha256="1svawi74rfir9czqyf194wmh4fw053n81j7prnanyfskrchkd94k"; depends=[]; }; glmmTMB = derive2 { name="glmmTMB"; version="0.2.0"; sha256="1yqizxjapdh0n872d26bdgn8a04xc6647mnjhb40g0jj59qgmxrc"; depends=[lme4 Matrix nlme RcppEigen TMB]; }; - glmmsr = derive2 { name="glmmsr"; version="0.2.1"; sha256="1f2q8zy3jy97y59bdyxhachkv5ndiwp71ihnspjbwz17mvc38cmn"; depends=[BH lme4 Matrix numDeriv R6 Rcpp RcppEigen]; }; - glmnet = derive2 { name="glmnet"; version="2.0-13"; sha256="1zdqp6wnqxzp5qn2ky47phbkrxv3cpgbwmdp896h3xxjvp58sa7k"; depends=[foreach Matrix]; }; + glmmsr = derive2 { name="glmmsr"; version="0.2.2"; sha256="05psf6yjsp3zgh7lfdh2pk1zycp7rgdk61ccm7059f60dzg182b9"; depends=[BH lme4 Matrix numDeriv R6 Rcpp RcppEigen]; }; + glmnet = derive2 { name="glmnet"; version="2.0-16"; sha256="1brr51z1fzbpyj6myyir4g6dhbp6xwl7nx4xnvrjarnf5y0csk55"; depends=[foreach Matrix]; }; glmnetUtils = derive2 { name="glmnetUtils"; version="1.1"; sha256="0abvxkwfadh56672qh16vql49js9ar8cz8is0bs6i8jgsl5csz91"; depends=[glmnet Matrix]; }; glmnetcr = derive2 { name="glmnetcr"; version="1.0.3"; sha256="0w04m0q7w5xxm0yv14f2g1ykpy54pxzdplr0xcz9mn43wi4sl65a"; depends=[glmnet]; }; glmpath = derive2 { name="glmpath"; version="0.98"; sha256="1jbiqqd1s93i941dhyyx50zlgwavhyjfw8bx13z4gz05rdvi4gn8"; depends=[survival]; }; @@ -6830,7 +6960,7 @@ in with self; { globalboosttest = derive2 { name="globalboosttest"; version="1.1-0"; sha256="1k7kgnday27sn6s1agzlj94asww81655d2zprx6qg7liv677bxvf"; depends=[mboost survival]; }; globals = derive2 { name="globals"; version="0.11.0"; sha256="17spygv9m3mmn01cfxrm05pvny5ddzvr78c60hixqbfh8385na5c"; depends=[codetools]; }; globe = derive2 { name="globe"; version="1.2-0"; sha256="0xa0q5dac0g7xdlr679f3km8nqxlm7gi4msp9fbfivfvy0rmri96"; depends=[]; }; - glogis = derive2 { name="glogis"; version="1.0-0"; sha256="19h0d3x5lcjipkdvx4ppq5lyj2xzizayidx0gjg9ggb1qljpyw9m"; depends=[sandwich zoo]; }; + glogis = derive2 { name="glogis"; version="1.0-1"; sha256="1sbvcg5slvd2c7fasvbj534x36rh11zq3mxv5z0jwpqd6h1xadmd"; depends=[sandwich zoo]; }; glpkAPI = derive2 { name="glpkAPI"; version="1.3.0"; sha256="0173wljx13jali2jxz4k5za89hc64n2j9djz5bcryrqhq4rmkp87"; depends=[]; }; glrt = derive2 { name="glrt"; version="2.0"; sha256="0p2b0digndvnn396ynv56cdg436n3ll7pxkb81rs3dhwbyqyc948"; depends=[survival]; }; glue = derive2 { name="glue"; version="1.2.0"; sha256="0vi9y8ix95g6hjqdz9c9y4119apbdjcypdv0ag8cl6vaxqs5n9qr"; depends=[]; }; @@ -6840,8 +6970,8 @@ in with self; { gmapsdistance = derive2 { name="gmapsdistance"; version="3.3"; sha256="09vgrfv5dj0myys0rl767wn0xx1yvmm176c48812ysj2kj3fa29v"; depends=[RCurl XML]; }; gmediation = derive2 { name="gmediation"; version="0.1.1"; sha256="0md4h298vqw67qrjcaia6xz8s7akdpcmxa83irm12qgbh56a5rpr"; depends=[MASS plyr VGAM]; }; gmeta = derive2 { name="gmeta"; version="2.3-0"; sha256="1izfz6gkisa8rskhfka6q73rcgzwdsmkdhy79jwcaqk25jrwfk60"; depends=[BiasedUrn binom]; }; - gmfd = derive2 { name="gmfd"; version="1.0"; sha256="1l6hf191v76l5p9f6r4qpq5y940nb23x07mb6lmwna8nnz1sspaz"; depends=[]; }; - gmm = derive2 { name="gmm"; version="1.6-1"; sha256="0giq0ic7gdvglkjby217r70dbz9v0xnvzvzv6icqj0m3rxwarmn1"; depends=[sandwich]; }; + gmfd = derive2 { name="gmfd"; version="1.0.1"; sha256="03sag09x7pjyzsp6w1z06108ig068krmw75064cnl3pqfvfyjfgr"; depends=[]; }; + gmm = derive2 { name="gmm"; version="1.6-2"; sha256="0pbimp4g5hpi949m6dpwwds3a9dv2m4iwwg2gbqq1m62fs18hbxi"; depends=[sandwich]; }; gmnl = derive2 { name="gmnl"; version="1.1-3"; sha256="05p2kikv8zz9ldc6xi5bz7fyinpd0sp2v82hxhx6h54hfa6i7b9v"; depends=[Formula maxLik mlogit msm plotrix truncnorm]; }; gmodels = derive2 { name="gmodels"; version="2.16.2"; sha256="0zf4krlvdywny5p5hnkr0r0hync6dvzc9yy4dfywaxmkpna8h0db"; depends=[gdata MASS]; }; gmp = derive2 { name="gmp"; version="0.5-13.1"; sha256="0xh9dli4i7hyjywsn2h780cxl3k7v0q421djyr1wshk7l9s5701g"; depends=[]; }; @@ -6896,6 +7026,7 @@ in with self; { gqlr = derive2 { name="gqlr"; version="0.0.1"; sha256="0qvyvy514ma5wi2qm6a8praqa7js9wl0hh0ack1hknw33g2gyqhy"; depends=[graphql jsonlite magrittr pryr R6]; }; gquad = derive2 { name="gquad"; version="2.1-1"; sha256="19k7cqp2j5vb6m9hxdm951wfjh6nsswb64pdz9g93ypcqrg02wa4"; depends=[ape seqinr]; }; grImport = derive2 { name="grImport"; version="0.9-0"; sha256="1d8fd7502qj7cirjqdkr1qj51rylw2fz5hs06avfvc2dxs2xwfw1"; depends=[XML]; }; + grImport2 = derive2 { name="grImport2"; version="0.1-4"; sha256="1hwx287pp936f0wbcicplwmhz96ip00wq09dp7bvz80lqcmr8nyx"; depends=[base64enc jpeg png XML]; }; gradDescent = derive2 { name="gradDescent"; version="3.0"; sha256="1jxgvnjw9qk5bkb0fw4kyks4vb9d1933jn79ry0w6956mq2xbb79"; depends=[]; }; grade = derive2 { name="grade"; version="0.2-1"; sha256="085hfvqn880yk19axdjv3z9jr33kls212vs172a8mzhnkallph1r"; depends=[]; }; gradientPickerD3 = derive2 { name="gradientPickerD3"; version="0.1.0.0"; sha256="0b20iqfipr7migwk1fl4lvdf4ghprqivcgmchfshhr8q82hyd1q0"; depends=[htmlwidgets jsonlite shiny]; }; @@ -6903,8 +7034,9 @@ in with self; { granova = derive2 { name="granova"; version="2.1"; sha256="161fznqlnwmw53abmg2n62lhxxda7400ljnadvcdvsm8f6kcjf80"; depends=[car]; }; granovaGG = derive2 { name="granovaGG"; version="1.4.0"; sha256="0khqlqc6jg9cpdq06g6jlpfjcw3m6rj40ipljfai8g1630ril6q4"; depends=[ggplot2 gridExtra plyr RColorBrewer reshape2]; }; grapes = derive2 { name="grapes"; version="1.0.0"; sha256="079b7w2xhb0a481s7qihhka0l9ydkjdph0865wjjkcbpr4775p26"; depends=[magrittr]; }; - graphTweets = derive2 { name="graphTweets"; version="0.3.2"; sha256="13kab1nz85ghs5n882ss513di30b7lg72h676v37404ypj5a1vi1"; depends=[dplyr igraph reshape2]; }; + graphTweets = derive2 { name="graphTweets"; version="0.4.0"; sha256="1zw04s61wjgrx6r6fspp59y5l3bfjf68klcrkp7alaap5dpjsn9a"; depends=[dplyr igraph magrittr purrr reshape2 rtweet splitstackshape]; }; grapherator = derive2 { name="grapherator"; version="1.0.0"; sha256="071by9b8figbsf4g0f8a8mgcdksjksc57mnlgggilw7py1yjnjlh"; depends=[BBmisc checkmate deldir ggplot2 lhs reshape2 vegan]; }; + graphframes = derive2 { name="graphframes"; version="0.1.0"; sha256="1h7dng6j2wizr14sl3f9lpvka56vd40rjs6skfdyxbn5s8ijmdd8"; depends=[sparklyr tibble]; }; graphicalVAR = derive2 { name="graphicalVAR"; version="0.2.1"; sha256="1z4x32ji71rq1x89r3wmjhm1fq7klggpz6c1cf45fvcd9qs6ykhk"; depends=[dplyr glasso glmnet igraph Matrix mvtnorm qgraph Rcpp RcppArmadillo]; }; graphicsQC = derive2 { name="graphicsQC"; version="1.0-8"; sha256="12vg93xfmkv73i19vkb10q2qngmsxd3y42z3l6izdywbdc3cdfkg"; depends=[XML]; }; graphkernels = derive2 { name="graphkernels"; version="1.4"; sha256="1dwk1bd2nx9kdzxq31cgynd75r7am49ygkaryb6iqcmva1wc5xs0"; depends=[igraph Rcpp RcppEigen]; }; @@ -6918,12 +7050,13 @@ in with self; { greport = derive2 { name="greport"; version="0.7-1"; sha256="1h1g3khb30n3y8l1sxpas2s6s667az4yxvsq42x5dfx8fic42p6n"; depends=[data_table Formula ggplot2 Hmisc lattice latticeExtra rms survival]; }; greta = derive2 { name="greta"; version="0.2.3"; sha256="10vli747b5a1m53qszxk91wppg9511la9yc823qrr51s92z8i222"; depends=[coda progress R6 reticulate tensorflow]; }; grex = derive2 { name="grex"; version="1.7"; sha256="0bciyafqwx404axidz4dlj856mzy73ij5sifxhvbjnn07rx844c9"; depends=[]; }; + greybox = derive2 { name="greybox"; version="0.2.0"; sha256="0d0d1c5whh94n678p07fnwn2xaqgv54qp1k1rkis72dgs8jbzm2n"; depends=[forecast zoo]; }; greyzoneSurv = derive2 { name="greyzoneSurv"; version="1.0"; sha256="115i0d4fy4p4g4vd419hj9f23hi8cbiyfilgpgmag91ilr1xpcdp"; depends=[Hmisc survAUC survival]; }; - grf = derive2 { name="grf"; version="0.9.5"; sha256="0i3x5h19n3cq8mchm3zwg3rgr1ywknkghsk50m70zcjpb4cdbsj6"; depends=[Matrix Rcpp RcppEigen]; }; + grf = derive2 { name="grf"; version="0.9.6"; sha256="0gv1zphjgwqssiljyqhhv6ggnvw9nyg7wf7sasilpy59qpi457wv"; depends=[DiceKriging Matrix Rcpp RcppEigen sandwich]; }; gridBase = derive2 { name="gridBase"; version="0.4-7"; sha256="09jzw4rzwf2y5lcz7b16mb68pn0fqigv34ff7lr6w3yi9k91i1xy"; depends=[]; }; gridDebug = derive2 { name="gridDebug"; version="0.5-0"; sha256="12zrl7p8p7071w5viymdipycja7a2arvy0aahgahd5nlx1k1gha0"; depends=[graph gridGraphviz gridSVG]; }; gridExtra = derive2 { name="gridExtra"; version="2.3"; sha256="0fwfk3cdwxxim7nd55pn7m31bcaqj48y06j7an2k1v1pybk0rdl1"; depends=[gtable]; }; - gridGraphics = derive2 { name="gridGraphics"; version="0.2-1"; sha256="1ly6fxnac9g5p3dwxfscz95whaxvc2r713fi36x526yhaayj7xwj"; depends=[]; }; + gridGraphics = derive2 { name="gridGraphics"; version="0.3-0"; sha256="1p94flvq5h3x817pl1m0aj3sim87x6zdbpv9xrgdnqw3rxfzwgqs"; depends=[]; }; gridGraphviz = derive2 { name="gridGraphviz"; version="0.3"; sha256="1jz0d6kc8ci55ffm6dns8bhak9xnaq7mg5mpv3fk53lircn7mwl5"; depends=[graph Rgraphviz]; }; gridSVG = derive2 { name="gridSVG"; version="1.6-0"; sha256="06nxp0h6clsfxcx5lf11sgzq7v4ijbynh6hldbnpm6pqwn18hb0j"; depends=[jsonlite XML]; }; gridsample = derive2 { name="gridsample"; version="0.2.0"; sha256="0hpfhkma60h59z3akjqs7igs6zg00xs3jlq3sm48gxbjrk7fb5sm"; depends=[data_table deldir geosphere maptools raster rgdal rgeos sp spatstat spatstat_utils]; }; @@ -6938,7 +7071,7 @@ in with self; { groupsubsetselection = derive2 { name="groupsubsetselection"; version="1.0.3"; sha256="118cj5xc8nbq4fs2gbzg1nhynixaflbl0si77gyy4ybw0drsz4nj"; depends=[]; }; grove = derive2 { name="grove"; version="1.1"; sha256="0fqsj5dx7py7cin3hvfkxglh8v3x0dwj6cxy4h5vbddjl687db5x"; depends=[Rcpp RcppArmadillo wavethresh]; }; growcurves = derive2 { name="growcurves"; version="0.2.4.1"; sha256="0h96c1hd6cdzc2l2a9dakmxn2hspvr0fpx9938iscm4hi9ds97m2"; depends=[Formula ggplot2 Rcpp RcppArmadillo reshape2]; }; - growfunctions = derive2 { name="growfunctions"; version="0.13"; sha256="19ngsd326vws2f3wsrkcsyzn64fm9nnqvnbamfw6aal9xzzzz59m"; depends=[ggplot2 Matrix mvtnorm Rcpp RcppArmadillo reshape2 spam]; }; + growfunctions = derive2 { name="growfunctions"; version="0.14"; sha256="1pvyiw20fxm3l4giyq4iizc67yy36i6wq4ch2qyqg4mfd4bki2g4"; depends=[ggplot2 mvtnorm Rcpp RcppArmadillo reshape2 spam]; }; growth = derive2 { name="growth"; version="1.1.0"; sha256="0d1hc56ybp5chckqv5q5jvpgbl7xn9dkbc4dd4sz5gawn1hngbxm"; depends=[rmutil]; }; growthcurver = derive2 { name="growthcurver"; version="0.2.1"; sha256="0q70g940ggpwnx2cpq2j8ambfbj9sqw6ivyp9cya1nbn05bah9ds"; depends=[caTools minpack_lm]; }; growthmodels = derive2 { name="growthmodels"; version="1.2.0"; sha256="1wy5z77819s3daa0mifafcjfkggsq0ac522yagj86ml3vf7yqppj"; depends=[]; }; @@ -6946,7 +7079,7 @@ in with self; { growthrates = derive2 { name="growthrates"; version="0.7.1"; sha256="0ci846jgshnvrvifl8snyax8ljs9n13lr42mzm89l0gpkg6lh2g0"; depends=[deSolve FME lattice]; }; grpSLOPE = derive2 { name="grpSLOPE"; version="0.2.1"; sha256="1r9irf83f7szhkdqis2rakil8fsr3rqsfrj4dmbg3r3rnr8wl8nh"; depends=[SLOPE]; }; grplasso = derive2 { name="grplasso"; version="0.4-5"; sha256="15bqckq9qjdlllhfpb21vzgi9msbl544alkrz01w1vvb3hk1847y"; depends=[]; }; - grpreg = derive2 { name="grpreg"; version="3.1-2"; sha256="042waw813jfc163376019zd7ngwrmrr26z17c2kw7ggvp1vz5m9q"; depends=[Matrix]; }; + grpreg = derive2 { name="grpreg"; version="3.1-3"; sha256="0i5gxhjylva3aby933hydkdb8v842qfa4jgfs0pwim8xfr2ipjs7"; depends=[Matrix]; }; grpregOverlap = derive2 { name="grpregOverlap"; version="2.2-0"; sha256="1kq8wxpx21irwckndgfkzdy5jgzf7pmcwpclmjzjxznv6cyaikd0"; depends=[grpreg Matrix]; }; grpss = derive2 { name="grpss"; version="3.0.1"; sha256="01bjjhv3vkvn5h363g5a9dlm7kzq10q7ixmrc0kkq5hsbs31vl3x"; depends=[doParallel foreach grpreg MASS]; }; grr = derive2 { name="grr"; version="0.9.5"; sha256="0arbcgrvhkwb5xk4nry1ffg2qj0v8ivhjghdr505ib4357g0c9i9"; depends=[]; }; @@ -6956,6 +7089,7 @@ in with self; { gsalib = derive2 { name="gsalib"; version="2.1"; sha256="1k3zjdydzb0dfh1ihih08d4cw6rdamgb97cdqna9mf0qdjc3pcp1"; depends=[]; }; gsarima = derive2 { name="gsarima"; version="0.1-4"; sha256="1ay3iamnvg7mbnl1xaxxcyic559bdnfspy883w2bwgy20yhr34yg"; depends=[MASS]; }; gsbDesign = derive2 { name="gsbDesign"; version="1.00"; sha256="1kbwlpxbr70aagx9jkap9xlw13r1k3y630b08wmmny421sv4zhxl"; depends=[gsDesign lattice]; }; + gscounts = derive2 { name="gscounts"; version="0.1-1"; sha256="1x2irpp0jxninijdhsiw12j19c5yq9kljv48j81sp3k97s2f9vbd"; depends=[Rcpp]; }; gset = derive2 { name="gset"; version="1.1.0"; sha256="1gingqw6la8n7mnl47wpz9sicxca4zi2m8p35n6cnihrniibhajc"; depends=[Hmisc MCMCpack mvtnorm]; }; gsg = derive2 { name="gsg"; version="2.0"; sha256="17fjl7aw1s814krnszxd4y1d4210bnkrf4kb2fwsycqwcwms5pm7"; depends=[boot mgcv mvtnorm numDeriv]; }; gsheet = derive2 { name="gsheet"; version="0.4.2"; sha256="1mfpg91855qg0bi6wk0wy58b58lm06jw9fqdl6psqdvnmaf7n2w5"; depends=[httr stringr]; }; @@ -6964,10 +7098,10 @@ in with self; { gsloid = derive2 { name="gsloid"; version="0.1.0"; sha256="1ma5si86ynfsis0pnw8hyv6xc4frbkhy5ks03mr0z16gasffkycg"; depends=[]; }; gsmoothr = derive2 { name="gsmoothr"; version="0.1.7"; sha256="00z9852vn5pj04dhl3w36yk0xjawniay6iifw1i7fd8g98mgspxp"; depends=[]; }; gsrsb = derive2 { name="gsrsb"; version="1.0.3"; sha256="1r4pc3zcmgwxbsmpwb6m24mmy0p78nq35bigjqvwcc32imyw4ls9"; depends=[ldbounds mvtnorm xtable]; }; - gss = derive2 { name="gss"; version="2.1-7"; sha256="1nrs1yhf2h06pkkhkvaal92h0mzrwixs0pay6dkb8q2d9igbn184"; depends=[]; }; + gss = derive2 { name="gss"; version="2.1-8"; sha256="1g44214kbgx4gafcz482iyy3izzv2cfp6v6yqfggp6lkvn6wwv0p"; depends=[]; }; gsscopu = derive2 { name="gsscopu"; version="0.9-3"; sha256="0bvhhs5wn4y1dcff2g87f80jdn3i4mdbvdbydsbx80ng38rfxhhg"; depends=[gss]; }; - gstat = derive2 { name="gstat"; version="1.1-5"; sha256="1wfzffl0wfimb93d5ln96yhv2g64aywzmh6hdaadl8qyqx6rx7q3"; depends=[FNN lattice sp spacetime zoo]; }; - gsubfn = derive2 { name="gsubfn"; version="0.6-6"; sha256="196x4c3ihf4q3i0v7b1xa6jm8jjld2rsx00qz03n90wfnjdx5idv"; depends=[proto]; }; + gstat = derive2 { name="gstat"; version="1.1-6"; sha256="0snvga824v1kbd3xp46652bv6drfrgkjsi5zrbdcliqpqz79wk9f"; depends=[FNN lattice sp spacetime zoo]; }; + gsubfn = derive2 { name="gsubfn"; version="0.7"; sha256="00j6b8b6xsx6v370h220x233rpk6asca78165y3d48jpwvwisdc9"; depends=[proto]; }; gsw = derive2 { name="gsw"; version="1.0-5"; sha256="0lv4x4is53xybgg205dncizpnqnakqk47b5wgys2kr4ixqc8jipb"; depends=[testthat]; }; gsynth = derive2 { name="gsynth"; version="1.0.6"; sha256="0fzdlflrl9qlvbzjdspws3naabwyphwqys01wp4wkw5y7whq0mar"; depends=[abind doParallel foreach GGally ggplot2 mvtnorm Rcpp RcppArmadillo]; }; gt4ireval = derive2 { name="gt4ireval"; version="2.0"; sha256="1d567iz57xqszm45l1wq4n2qrrmyz8ssll1vllfmncb9ibbnx4f3"; depends=[]; }; @@ -6996,10 +7130,12 @@ in with self; { gym = derive2 { name="gym"; version="0.1.0"; sha256="0vcwzgawqwjsf65hr1mbjkz3px8zsibfkn42jpsg39n13jpfjq8v"; depends=[httr jsonlite]; }; gyriq = derive2 { name="gyriq"; version="1.0.2"; sha256="12vbnhianzi4l43czaxrbnbkz1h8lvmwjys0y3c2ml3g6dmwwfji"; depends=[CompQuadForm irlba mvtnorm survival]; }; h2o = derive2 { name="h2o"; version="3.16.0.2"; sha256="181rm5y7wwmpzi45sy62blr6jk9wfbs3j14ansmh7ad1rbml3zm3"; depends=[jsonlite RCurl]; }; + h2o4gpu = derive2 { name="h2o4gpu"; version="0.2.0"; sha256="06d2rrr27xvnsai6zjiaiw0jjfzdza1cc39c03d6pjkvnh0mqh2c"; depends=[magrittr reticulate]; }; h5 = derive2 { name="h5"; version="0.9.9"; sha256="14p7i1sj24ky87kd7qr3n9fc9l64s0bp0rwbyl6i2x69xn75gpsx"; depends=[Rcpp]; }; hBayesDM = derive2 { name="hBayesDM"; version="0.5.0"; sha256="174z98jvi04df04lpdxh3j8lmjvgrg287nxfnrcvjkibc0jiss4m"; depends=[ggplot2 loo Rcpp rstan rstantools]; }; hIRT = derive2 { name="hIRT"; version="0.1.2"; sha256="0pqp6bycr13di1hbi5sqnkiannz2hyg0ysshswv2i9fp0vkhdhqf"; depends=[pryr rms]; }; - hR = derive2 { name="hR"; version="0.1.1"; sha256="18a9nhnsw7va1ambj2lc99ralhildc3a2l6xpilfanig4pg7cq08"; depends=[data_tree reshape2 visNetwork]; }; + hNMF = derive2 { name="hNMF"; version="0.5"; sha256="1nm9sy921fjzqc60p0mf6k0j5a56bdrd8hnghnpaqzs244mm08bj"; depends=[MASS NMF nnls oro_nifti R_matlab rasterImage spatialfil]; }; + hR = derive2 { name="hR"; version="0.1.3"; sha256="0s7c2aiq58c2zmv25m42cxp5chzkp5grz5bjqrknfkwjy21679h1"; depends=[data_tree reshape2]; }; hSDM = derive2 { name="hSDM"; version="1.4"; sha256="1jq6hdnyv446ng62srip0b48kccf0qw3xqym3fprg74mjdy3inqr"; depends=[coda]; }; haarfisz = derive2 { name="haarfisz"; version="4.5"; sha256="1qmh4glwzqwqx3pvxc71rlcimp1l0plgdf380v9hk0b4gj7g3pkf"; depends=[wavethresh]; }; hail = derive2 { name="hail"; version="0.1.1"; sha256="1nrc9msqyy5iq2i6p8875anbqswxl2z6vdd4hvihnl22qh5fnbvh"; depends=[]; }; @@ -7007,7 +7143,7 @@ in with self; { hansard = derive2 { name="hansard"; version="0.6.0"; sha256="13h68b300c4lkqbl5gw4hkqcbb2ikvan4hx8092ds995514rg4x8"; depends=[dplyr httr jsonlite lubridate stringi tibble tidyr]; }; hapassoc = derive2 { name="hapassoc"; version="1.2-8"; sha256="0qs5jl0snzfchgpp6pabncwywxcmi743g91jvjiyyzw0lw85yv4s"; depends=[]; }; haplo_ccs = derive2 { name="haplo.ccs"; version="1.3.1"; sha256="0cs90zxxbvglz1af0lh37dw1gxa04k0kawzxamz2was3dbh19lbz"; depends=[haplo_stats survival]; }; - haplo_stats = derive2 { name="haplo.stats"; version="1.7.7"; sha256="1rag22sqy8r87w5a1dww5cxknacm6975bpp74vw9zr04ldx4c64k"; depends=[rms]; }; + haplo_stats = derive2 { name="haplo.stats"; version="1.7.9"; sha256="19kxascqq5qz0zdxx0w837ji207y1z2ggxkl4vmlbay03k2dw2mx"; depends=[rms]; }; haploR = derive2 { name="haploR"; version="1.6.2"; sha256="0xzh18170gxxd91yjvh2j3a8jkkz8hyf5rbvh4c9vfi5zirbi82z"; depends=[httr plyr RUnit tibble XML]; }; haploReconstruct = derive2 { name="haploReconstruct"; version="0.1.2"; sha256="17zdl9c3yy6jdzv1wp0ailbga456pmmybzxh3dldymhj8qf32cx0"; depends=[data_table dbscan foreach gplots igraph matrixStats stringi zoo]; }; haplotyper = derive2 { name="haplotyper"; version="0.1"; sha256="0pcshlh29c4zazhkcq4371kqh9inrbx494y5a1qb1k2c92fkax31"; depends=[]; }; @@ -7029,7 +7165,7 @@ in with self; { hbdct = derive2 { name="hbdct"; version="1.0.1"; sha256="1lmbhl757hdswfq3skwbwsgxpfgim8475d9hk511dbwrzcm6wsxr"; depends=[]; }; hbim = derive2 { name="hbim"; version="1.0.3"; sha256="1480nydsi2xj7zbfk4zw24mhsjadf83d827kpqzbmn0yh6srp3ps"; depends=[mvtnorm]; }; hbm = derive2 { name="hbm"; version="1.0"; sha256="0qz28azm91a6pbss1mfc47a21d3q9rs3mmw0kgwc7i2a2m43mysm"; depends=[doParallel foreach Matrix]; }; - hbmem = derive2 { name="hbmem"; version="0.3"; sha256="0ylxp77ack874sadwfnry84a6bg8gdl9xbw821lp5q05nnyg0dcj"; depends=[]; }; + hbmem = derive2 { name="hbmem"; version="0.3-3"; sha256="1rajd5h9gp0rrpc0q0m0fx37mv2n70da3gnfvvnjc5a77mzfyqkp"; depends=[]; }; hbsae = derive2 { name="hbsae"; version="1.0"; sha256="1iwmpi0pn5fxyxkwqkbmy6w1f1wcx0p809jnviim0ypwib32mhh7"; depends=[arm Matrix]; }; hcc = derive2 { name="hcc"; version="0.54"; sha256="14b3pamkywb0wsjpbm0wpflcds0b5mfymvgk92rmf6ngz1bkpdbq"; depends=[]; }; hcci = derive2 { name="hcci"; version="1.0.0"; sha256="11piy1ajg3j3dbh66szzf7lhc3x28fz75ai39vlx0gl5nc2v5zs5"; depends=[]; }; @@ -7041,7 +7177,7 @@ in with self; { hdi = derive2 { name="hdi"; version="0.1-6"; sha256="1lzy4jcz14j1qi6z4j1sq7z3z75n8jygnzlvqjf45vn1sqil17cq"; depends=[glmnet linprog MASS scalreg]; }; hdlm = derive2 { name="hdlm"; version="1.3.1"; sha256="1zl6bksw0apkmn5shf8qjpxjyx6vb40dc4m4db76hhn5nhcp10ic"; depends=[foreach glmnet iterators MASS Matrix]; }; hdm = derive2 { name="hdm"; version="0.2.3"; sha256="0nj7pbkygzbiraw1b3pqv3bnkjhi1a0h48q0zgkcq8y79kj2f8cl"; depends=[checkmate Formula ggplot2 glmnet MASS]; }; - hdme = derive2 { name="hdme"; version="0.1.0"; sha256="1wq4kl7dc853v8v1wgihayrd50x5asx5r190lq6flm2ssqd1m6nm"; depends=[ggplot2 glmnet Rcpp RcppArmadillo Rdpack Rglpk]; }; + hdme = derive2 { name="hdme"; version="0.1.1"; sha256="0p8qldiiqbd2vyxyrgz0dsh7n2dw5vbvqfqy6z5vkjl52wdggp7z"; depends=[ggplot2 glmnet Rcpp RcppArmadillo Rdpack Rglpk]; }; hdnom = derive2 { name="hdnom"; version="4.9"; sha256="11yzjfp6b4apn0nyqmi0qm5rd8xy49w6hwwiq7p566mxqy32i2j2"; depends=[foreach ggplot2 glmnet gridExtra ncvreg penalized rms survAUC survival]; }; hdpca = derive2 { name="hdpca"; version="1.0.0"; sha256="1sv7caw4nhpcvsb7fxpvf2b5zskvfsv004hrqc51b5jx4fsc7y92"; depends=[boot lpSolve]; }; hdrcde = derive2 { name="hdrcde"; version="3.2"; sha256="1901mg2k2ch9fzn1n9k0kmxkgd1m4pxvrda7mv0mp64nf4mx43xw"; depends=[ash ggplot2 KernSmooth ks locfit RColorBrewer]; }; @@ -7060,9 +7196,9 @@ in with self; { hellno = derive2 { name="hellno"; version="0.0.1"; sha256="1j787rw9hh75bvkckmlz5xkgwc22gd7si3mgjd7v60dd6lykfa88"; depends=[]; }; helloJavaWorld = derive2 { name="helloJavaWorld"; version="0.0-9"; sha256="1a8yxja54iqdy2k8bicrcx1y3rkgslas03is4v78yhbz42c9fi8s"; depends=[rJava]; }; helsinki = derive2 { name="helsinki"; version="0.9.29"; sha256="0bn5iyxjn9qs6f0dmhv51ssayywbx1rayh80zbzk0gsm94nhs0d9"; depends=[maptools RCurl rjson sp]; }; - heplots = derive2 { name="heplots"; version="1.3-4"; sha256="0qrx2qiy5w1hdy48ipa5is3k6dmz9gnfk5pckqpxp3hd0ip3217f"; depends=[car MASS]; }; + heplots = derive2 { name="heplots"; version="1.3-5"; sha256="1vyhfkp66gi17jni3gsbv9kn1s0n00qigr13q8xbzbgylz5jjiln"; depends=[car MASS]; }; here = derive2 { name="here"; version="0.1"; sha256="1vb5dxqdpimy51q1gjsypyq14p2hhvj7wsvh6g35pj1g03cyg9av"; depends=[rprojroot]; }; - hergm = derive2 { name="hergm"; version="3.1-0"; sha256="17mxn2ff7yzj95vjsppvz7c9a5g6a2z9zyf34xvvxp9031zhrf46"; depends=[ergm latentnet mcgibbsit network sna]; }; + hergm = derive2 { name="hergm"; version="3.2-0"; sha256="0yy684vjlk06r0bsx7clpjaj05q0pmbj006kbh9q6rysh35nf9p3"; depends=[ergm latentnet mcgibbsit network sna]; }; heritability = derive2 { name="heritability"; version="1.2"; sha256="18snrfsjj5jw5qicj92d5qch9v4ciqw1hbiwg6q8kfjka9nmqpma"; depends=[MASS]; }; hermite = derive2 { name="hermite"; version="1.1.1"; sha256="0ns8l1rf346qxalfdwc7ny0kjp212f6qnnlgillpyvd8k29kg8iy"; depends=[maxLik]; }; hesim = derive2 { name="hesim"; version="0.1.0"; sha256="002phncl1glv3c3gwp9ifpk56j06rka26a3774xlj3zcs6izglns"; depends=[data_table Rcpp RcppArmadillo]; }; @@ -7082,12 +7218,13 @@ in with self; { hglm_data = derive2 { name="hglm.data"; version="1.0-0"; sha256="1hrq1jac658z5xjsg03nfkb4kwm9z44bhciv5chk74ww8gjr9j9q"; depends=[MASS Matrix]; }; hgm = derive2 { name="hgm"; version="1.17"; sha256="11hv4pfv3gqiargvwvrxqzfji75j291w1nilawf8yjc3isnc4wjp"; depends=[deSolve]; }; hhh4contacts = derive2 { name="hhh4contacts"; version="0.13.0"; sha256="17f31xhh6kk7sx5d5dvpwpvl72wd45zgb4fcpdayx3yrm719csz9"; depends=[surveillance]; }; + hhi = derive2 { name="hhi"; version="1.1.0"; sha256="0f0b6a2zr2nipcx4p8n2wx088kndh6bd150f80619kjfizr55x2d"; depends=[ggplot2]; }; hht = derive2 { name="hht"; version="2.1.3"; sha256="022a8zz2m34q89h29jglfj21knlqd8dwi85qmsi78ly1vacnzap8"; depends=[EMD fields spatstat]; }; hiPOD = derive2 { name="hiPOD"; version="1.0"; sha256="1i15ickz2s0kffh99qq30pl5hsl0lbj0kp55jnbv4x72hndzhmla"; depends=[rgl]; }; hiddenf = derive2 { name="hiddenf"; version="2.0"; sha256="0shc1kfiq527mkc5i97zcm51hsvknnhjg7dyfvbfqyk145v6sz00"; depends=[]; }; hier_part = derive2 { name="hier.part"; version="1.0-4"; sha256="03acdgzkhbk4p0wxw2g1hzklmq9hzmdkkvfj742vzfswdd803yg9"; depends=[gtools]; }; hierDiversity = derive2 { name="hierDiversity"; version="0.1"; sha256="1n4jg003h9hvr2n43jwxgfpazvc5ij5lqvspxi49w8fpzpcrqrjj"; depends=[]; }; - hierNet = derive2 { name="hierNet"; version="1.6"; sha256="08lifk92caa4l9nfb89rl6vby8sd1ba3ay7z29ffirsg7cx07qiw"; depends=[]; }; + hierNet = derive2 { name="hierNet"; version="1.7"; sha256="1yjsbi17qkz7x9q9x6i8312skwf4gjyisp2096wbg9s19dzvccvi"; depends=[]; }; hierarchicalDS = derive2 { name="hierarchicalDS"; version="2.9"; sha256="0ckxy4pww5iik4m4kqs714f00g7lfzsarjdbpd0bcalvq4lmaal2"; depends=[coda ggplot2 Matrix mc2d mvtnorm rgeos truncnorm xtable]; }; hierarchicalSets = derive2 { name="hierarchicalSets"; version="1.0.2"; sha256="0m5mnx1zmiscj0k1gnljr7fla4y1qhysi32a8q9jlah2q7grk7x9"; depends=[ggdendro ggplot2 gtable MASS Matrix RColorBrewer Rcpp scales]; }; hierband = derive2 { name="hierband"; version="1.0"; sha256="0d95hrgkd8b5sww3wsgs6v9zg9pm71ick8x8kj8d6vyib350h6yn"; depends=[]; }; @@ -7103,6 +7240,7 @@ in with self; { highmean = derive2 { name="highmean"; version="3.0"; sha256="1lq7z0l1737j4wvsy7951405afylyywp7vf2i7girzh459fdfzpc"; depends=[MASS mnormt mvtnorm]; }; highr = derive2 { name="highr"; version="0.6"; sha256="0n9v44dxdy5fhkdmpbpa2p78whyd9z3rhhy42ipdz5m5vsr55qa3"; depends=[]; }; highriskzone = derive2 { name="highriskzone"; version="1.4-2"; sha256="1q9y34nj73kg5y6qy4kb023vyzbdb0f6x23asq20bj5pmz2l25y1"; depends=[deldir fields ks Matrix mvtnorm rgeos spatstat]; }; + higrad = derive2 { name="higrad"; version="0.1.0"; sha256="0q9av8qyvmvgy6a3l7svcmbkjjgnp4iny1cld4g3qsbaz3yp3jaj"; depends=[Matrix]; }; hillmakeR = derive2 { name="hillmakeR"; version="0.2"; sha256="1baynibgn4xqmpsxna8irggxvdc484mq5nza00rwg58vh1bc7wzq"; depends=[]; }; hindexcalculator = derive2 { name="hindexcalculator"; version="1.0.0"; sha256="06b4dn629avmnyqxb0l39m00wz9cg9dddmm6qhgwgnzlxh14ifgk"; depends=[]; }; hint = derive2 { name="hint"; version="0.1-1"; sha256="1n18j2hcb1qynhsln10nzryi20l5aqhr7i1aanww10y5dz573zi3"; depends=[]; }; @@ -7120,7 +7258,7 @@ in with self; { hmeasure = derive2 { name="hmeasure"; version="1.0"; sha256="0wr0xq956glmhvy4yis3qq7cfqv9x82ci9fzx3wjvaykd16h0sx9"; depends=[]; }; hmi = derive2 { name="hmi"; version="0.9.10"; sha256="1swbzxykf4mwgahadi5l1xy06h4ivpc4gq3izshg6fvgrapbg1r5"; depends=[boot coda linLIR lme4 MASS Matrix MCMCglmm mice msm mvtnorm nlme nnet ordinal pbivnorm tmvtnorm VGAM]; }; hmm_discnp = derive2 { name="hmm.discnp"; version="0.2-4"; sha256="096flx2b9s66dasqj05zrkxsmg3lj6j5w0pwrw3b1qkpp9dvlrkb"; depends=[]; }; - hmmm = derive2 { name="hmmm"; version="1.0-3"; sha256="0yjx5i13jbv7vzxn84m6305124ri7jnym0bxbdj46s6l7lw025a9"; depends=[MASS mvtnorm quadprog]; }; + hmmm = derive2 { name="hmmm"; version="1.0-4"; sha256="1sbr85lcmcw3lv0ygqwfbarr91dp3br1xnlygy49145cvl93nfci"; depends=[MASS mvtnorm nleqslv quadprog]; }; hms = derive2 { name="hms"; version="0.4.2"; sha256="1g6hslk3z0xga38r71irxq802wskg6nv804mp8y9f7i2wfrj0y55"; depends=[pkgconfig rlang]; }; hnp = derive2 { name="hnp"; version="1.2-4"; sha256="14w2n95pgi5h71fag4ndrc82z7q26za99vj5z99rv19l5jkvmd46"; depends=[MASS]; }; hoa = derive2 { name="hoa"; version="2.1.4"; sha256="15klcpmja4afwmpfxrxgrfis0vj7fil8k15jc3p0lqz3dhvq0dvf"; depends=[statmod survival]; }; @@ -7137,6 +7275,7 @@ in with self; { hopbyhop = derive2 { name="hopbyhop"; version="2.1"; sha256="0j4m1zz0ijf1kw2m12g7bww3418b8pyjvvrzkm8xcryjil2xfmim"; depends=[]; }; horizon = derive2 { name="horizon"; version="1.0"; sha256="1wrp5qr1qql21xwcjh415q67z2ym4790zfp0n81360v6bp2b3hyy"; depends=[raster]; }; hornpa = derive2 { name="hornpa"; version="1.0"; sha256="0pfvk2jkrwgvshgq9g55qijgpjh0677rpbya0r8759n92v3axbp4"; depends=[]; }; + horserule = derive2 { name="horserule"; version="1.0.0"; sha256="0d348pn0ld7lr9lfl1z05905l9kl296j0xic1pib6r5l1c5600r9"; depends=[gbm ggplot2 inTrees MASS mvnfast randomForest RColorBrewer Rdpack]; }; horseshoe = derive2 { name="horseshoe"; version="0.1.0"; sha256="19khsr7gfcygqasjswvm0v0ddna1i1grfbhars8jlvybfawswhgx"; depends=[]; }; hot_deck = derive2 { name="hot.deck"; version="1.1"; sha256="13pfgcyqaf5ik3pi8vgm06xmqli4hgslzlmhy1zi951anzdr49bd"; depends=[mice]; }; hotspot = derive2 { name="hotspot"; version="1.0"; sha256="0a4w5d6rg324hd06lfwr1hxf6bwr10n55s3ynz5bpkh9c61yik3n"; depends=[]; }; @@ -7150,7 +7289,7 @@ in with self; { hrbrthemes = derive2 { name="hrbrthemes"; version="0.1.0"; sha256="1hf4370hj80m6zr20236p9068g6ky0366gfk5l9hnj6l8jpmy9qa"; depends=[extrafont ggplot2 hunspell purrr scales stringi]; }; hsdar = derive2 { name="hsdar"; version="0.7.0"; sha256="09yx8zc9qbf2kj8k76z9a6rhh5zy4ggsxvwhx35666phdml42dy0"; depends=[caret raster rgdal signal]; }; hsicCCA = derive2 { name="hsicCCA"; version="1.0"; sha256="1d4lkjrihwhl3jrsj7250ccd90nfwpllyavc3mp15fhcy2jnjci8"; depends=[]; }; - hsm = derive2 { name="hsm"; version="0.1"; sha256="1dacsq2f23bz94rh4s3477hs38pbrpz2lis4s1l9im894bcbny1x"; depends=[]; }; + hsm = derive2 { name="hsm"; version="0.2.0"; sha256="066shjikqrrkxpnra4zknax1a0sk5nx9ms1br58vwqqvqq479rym"; depends=[]; }; hsmm = derive2 { name="hsmm"; version="0.4"; sha256="1fh8c5kfv4brygdq6bfkrhrhkm99mxl4ljb1mhp9nf2bjlla11mc"; depends=[mvtnorm]; }; hsphase = derive2 { name="hsphase"; version="2.0.1"; sha256="1z7yxbknldxn780dxw9xz984b3i8pj5hmdnbynvxc5k0ss8g7isy"; depends=[Rcpp RcppArmadillo snowfall]; }; htdp = derive2 { name="htdp"; version="0.1.4"; sha256="0w579qp0p544xryb5r08m1nhqf7rmgv9q0lyx6my4av62l70ka5w"; depends=[Rcpp]; }; @@ -7159,21 +7298,22 @@ in with self; { htmltab = derive2 { name="htmltab"; version="0.7.1"; sha256="0lymagm7z6zn0ddygqxi831ikk74112lkqkbvs5j1djhmr359ajc"; depends=[httr XML]; }; htmltidy = derive2 { name="htmltidy"; version="0.4.0"; sha256="090rj1fzdsa8m4g33d4mx92dm8afh173i4hqa4zym8c909jwh9qn"; depends=[htmltools htmlwidgets Rcpp XML xml2]; }; htmltools = derive2 { name="htmltools"; version="0.3.6"; sha256="18k8r1s8sz1jy7dkz35n69wj20xhmllr53xmwb4pdzf2z61gpbs4"; depends=[digest Rcpp]; }; - htmlwidgets = derive2 { name="htmlwidgets"; version="1.0"; sha256="09lkmzh35l1420sg0dyh4vgyishqx3g8xmgs2y9z7lbi09xgwwwr"; depends=[htmltools jsonlite yaml]; }; - htree = derive2 { name="htree"; version="0.1.1"; sha256="1ns7yzzxapax5f355bpq81i581l1iwrfixp1k69n8mzsy106i988"; depends=[]; }; - hts = derive2 { name="hts"; version="5.1.4"; sha256="0n1gna2694yih5kaiw59crdlfcdfm9dqhjpkcwaskgrpmh08wnkd"; depends=[forecast Matrix matrixcalc Rcpp RcppEigen SparseM]; }; + htmlwidgets = derive2 { name="htmlwidgets"; version="1.2"; sha256="04c4d0mfcy3dkdlbxnaccpdgxvyxfdwfmmh5djim6v9hyg0j2z8s"; depends=[htmltools jsonlite yaml]; }; + htree = derive2 { name="htree"; version="1.0.0"; sha256="1yw29rk752g3sc50igcgnxfsp7ydcmrlwpacch5c8yjg5di06ymb"; depends=[]; }; + hts = derive2 { name="hts"; version="5.1.5"; sha256="0mvsxrk7wkfn81hbk8a80fckiqiwdbvhq42k7c6lm69gamnbak2f"; depends=[forecast Matrix matrixcalc Rcpp RcppEigen SparseM]; }; httk = derive2 { name="httk"; version="1.8"; sha256="1snwqqvacxgl4cyadx5la87xh4kxiqpdmyq4szqz5r1aq2sxrr03"; depends=[data_table deSolve msm mvtnorm survey truncnorm]; }; httpRequest = derive2 { name="httpRequest"; version="0.0.10"; sha256="0f6mksy38p9nklsr44ki7a79df1f28jwn2jfyb6f9kbjzh98746j"; depends=[]; }; httpcache = derive2 { name="httpcache"; version="1.1.0"; sha256="11hdc1jj2jbgvsps1h55azq0cr2fl556k631ns9k0747sjfmy2k9"; depends=[digest httr]; }; httpcode = derive2 { name="httpcode"; version="0.2.0"; sha256="06k853ihwzkcx4z3jzazpb03p91frqkwz18jy4fwr8j2nwyqbhgv"; depends=[]; }; httping = derive2 { name="httping"; version="0.2.0"; sha256="0hdcf51yak8yagy4xj9cyck934lgmvpkd08jvlql33ir5mqvvv3i"; depends=[httpcode httr jsonlite magrittr pryr]; }; httptest = derive2 { name="httptest"; version="3.0.0"; sha256="1k75i84ajka0abc8x51w74dldb0z9i08dlqbkcdby25465k01l8r"; depends=[digest httr jsonlite testthat]; }; - httpuv = derive2 { name="httpuv"; version="1.3.6.2"; sha256="0h3hkw575b211bxma23inbq1565wkhiapgasd539h219apqs534f"; depends=[Rcpp]; }; + httpuv = derive2 { name="httpuv"; version="1.4.0"; sha256="076blaj0vzwfgx212lvgscczmiy9n13izdshrm6xb9vpcmklm95m"; depends=[BH later promises Rcpp]; }; httr = derive2 { name="httr"; version="1.3.1"; sha256="0n7jz2digbgv48rbr9vmzv4vmf4rahl9jjy31izs7sxj4rs4s4r2"; depends=[curl jsonlite mime openssl R6]; }; hues = derive2 { name="hues"; version="0.1"; sha256="0b6y4ld242fqzx4ccxzk4i4zbx7myk7v3a03r0klgbh2mmw3ixm0"; depends=[colorspace]; }; huge = derive2 { name="huge"; version="1.2.7"; sha256="134d951x42vy9dcmf155fbvik2934nh6qm2w5jlx3x2c6cf7faq4"; depends=[igraph lattice MASS Matrix]; }; humanFormat = derive2 { name="humanFormat"; version="1.0"; sha256="0zwjbl8s5dx5d57sfmq6myc6snximc56zl88h8y1s1jqphyn9sir"; depends=[testthat]; }; humaniformat = derive2 { name="humaniformat"; version="0.6.0"; sha256="0vaynjzz57pk4y1liag9lpn9jkag2033a6bkn28zzm7ndg3344l6"; depends=[Rcpp]; }; + humanize = derive2 { name="humanize"; version="0.2.0"; sha256="0hhhd640n77s8xaa2gbd9fckdk2yjg68gdb7wjy56a2khzqfssxr"; depends=[assertthat glue lubridate]; }; humanleague = derive2 { name="humanleague"; version="2.0.2"; sha256="1svsqfqisywf0iqf3mrh4xnssvjmml6wn7l8iq5shvpmw71l4nnl"; depends=[curl Rcpp]; }; humidity = derive2 { name="humidity"; version="0.1.1"; sha256="0ifxjz7216ld5c4kc9vs83fcijbg5i2z0mwfzszch9j1s734yc8y"; depends=[]; }; hunspell = derive2 { name="hunspell"; version="2.9"; sha256="10186544s6nyd2ba470idxrxsl788dkmr1g1ri8x2n1lky9zmrik"; depends=[digest Rcpp]; }; @@ -7192,13 +7332,12 @@ in with self; { hydroPSO = derive2 { name="hydroPSO"; version="0.3-4"; sha256="12md94g78m7m1np36sadx0wxpb149pn5gd8yj2kw7fphb8g6a218"; depends=[Hmisc lattice lhs sp zoo]; }; hydroTSM = derive2 { name="hydroTSM"; version="0.5-1"; sha256="053id9ldr10mafww3vas9fiy16lz0n1mqqfg6wjsbm5r15jkz3ha"; depends=[automap e1071 gstat lattice maptools sp xts zoo]; }; hydrogeo = derive2 { name="hydrogeo"; version="0.6-1"; sha256="16m6yvr9yhvb0vdh9pqd6gzf3h9km7gd89y6risjddv6g83469k8"; depends=[]; }; - hydrolinks = derive2 { name="hydrolinks"; version="0.7.1"; sha256="1yghqn5wvwx2s1lqjh8pi051hki5f9glhaqnrnjlx4bbsirf3hv7"; depends=[dbplyr dplyr httr rappdirs RSQLite sf units]; }; - hydroscoper = derive2 { name="hydroscoper"; version="0.1.0"; sha256="06w3rzdv0cjyk5pfx6ji1hkjf23pfd2z0aigyynj7ajbqfxmibna"; depends=[readr stringi stringr XML]; }; + hydrolinks = derive2 { name="hydrolinks"; version="0.10.0"; sha256="0004a03bx9l9wq6zdz5az41rjxv1ka4qmnxk6ksy8i7365wsay88"; depends=[dbplyr dplyr httr rappdirs RSQLite sf units]; }; + hydroscoper = derive2 { name="hydroscoper"; version="1.0.0"; sha256="09dcn2wfd06waxzq8cv8lxyw07kavjp30qc2czn2gamrak8xvrl9"; depends=[jsonlite pingr plyr readr stringi stringr tibble]; }; hydrostats = derive2 { name="hydrostats"; version="0.2.5"; sha256="1n0wy8i1cfsgmqh898qi0qnqn4qx1srjvd05vmsf9qmhpnnyqw5m"; depends=[]; }; hyfo = derive2 { name="hyfo"; version="1.3.9"; sha256="03f3irmhndwfnv4i121gwxb2yv1868pggzyr80pgp4969qzddacm"; depends=[data_table ggplot2 lmom maps maptools MASS moments ncdf4 plyr reshape2 rgdal rgeos zoo]; }; hyper_fit = derive2 { name="hyper.fit"; version="1.0.3"; sha256="17f5i2i960796hl92y7ci9ffspway435r02kw1zk91lvfn927hng"; depends=[LaplacesDemon magicaxis MASS rgl]; }; hyper2 = derive2 { name="hyper2"; version="1.0-1"; sha256="107cp6na0srqax42fmvcsrviy631hg6phqmkc0cxz1zdxxxw6442"; depends=[partitions Rcpp]; }; - hyperSMURF = derive2 { name="hyperSMURF"; version="1.1.4"; sha256="0mqymg4326cjvcz9qvlfdsydfqgd6szfzy89llr5mwz2s3arnv6j"; depends=[doParallel foreach iterators randomForest unbalanced]; }; hyperSpec = derive2 { name="hyperSpec"; version="0.99-20171005"; sha256="0rhn9f4faxscwrip14ndymaddc5nfd6pyrhgwkwm8hf680wdrhbl"; depends=[ggplot2 lattice latticeExtra testthat]; }; hypercube = derive2 { name="hypercube"; version="0.1.0"; sha256="0iv3cfs636mwijm2rjk427izf0gk5lh2fknd7bmb8pd188ckwqmf"; depends=[stringr]; }; hypergea = derive2 { name="hypergea"; version="1.3.6"; sha256="1k1525bkkj83j2nn9ixidb8vjvdmc4l9jvfarzgg532gg7wn3841"; depends=[]; }; @@ -7236,6 +7375,7 @@ in with self; { iRegression = derive2 { name="iRegression"; version="1.2.1"; sha256="1kwsrmsflmqan96aj0dczlszfww1dlg6rwycyid52f7ghg9810rn"; depends=[mgcv]; }; iRepro = derive2 { name="iRepro"; version="1.0"; sha256="1knncn47pl411r31z1r5ipsiyagcpjbc2gb972n7l3539pcpf0zy"; depends=[]; }; iSDM = derive2 { name="iSDM"; version="1.0"; sha256="1hzs187mwv3k2wx6dpvkizjhkcx63mznd06wiw6047lf5jrlif0a"; depends=[ade4 colorRamps geometry geosphere maptools MASS pdist raster rgdal rgl sp virtualspecies]; }; + iTOP = derive2 { name="iTOP"; version="1.0.1"; sha256="1cjrbjrpfm27widw466kgkl5xlbyjf7ipk8ki8mfn3lqp9r2f3rc"; depends=[corpcor Matrix]; }; iWISA = derive2 { name="iWISA"; version="1.0-2"; sha256="0jqi1kh7jlc04nb9d1w711q4i8j1vgwbxjls09z7853kv22wxfyz"; depends=[fda ggplot2 waveslim]; }; iWeigReg = derive2 { name="iWeigReg"; version="1.0"; sha256="09ajbqllr4ajmpk8qs6qw019fx8a7vsabm37867zycssn77z9nc8"; depends=[MASS trust]; }; iadf = derive2 { name="iadf"; version="0.1.0"; sha256="02zx9n4ncg10bbydrr05631vzc4w2b1jg3x6xiaffg7x5rh4mnyf"; depends=[dplR dplyr manipulate rlang tibble tidyr]; }; @@ -7251,7 +7391,6 @@ in with self; { ic50 = derive2 { name="ic50"; version="1.4.2"; sha256="1a5ddmbdfr3ls132fvalbkh4yaawv9k58rgpy54s5qddrm6aas2s"; depends=[]; }; icRSF = derive2 { name="icRSF"; version="1.2"; sha256="1a7046lspk70cvrvzwzhnqcmc3cqa5a9bmzlw012jvcn39m2ca3l"; depends=[icensmis Rcpp]; }; ica = derive2 { name="ica"; version="1.0-1"; sha256="1bkl4a72l0k6gm82l3jxnib898z20cw17zg81jj39l9dn65rlmcq"; depends=[]; }; - icaOcularCorrection = derive2 { name="icaOcularCorrection"; version="3.0.0"; sha256="1vmvarc2apipd0vlhprc5wpgh8i38m5myj1gqdymjrnky0azq17f"; depends=[fastICA mgcv]; }; icamix = derive2 { name="icamix"; version="1.0.6"; sha256="0jys9r7wjxlwsq5rssih2lvsar1192w8vigdhhrcmf3d5z5ic1kp"; depends=[Rcpp RcppArmadillo]; }; icapca = derive2 { name="icapca"; version="1.1"; sha256="131gdrk8vsbac0krmsryvsp21bn9hzxqxq847zn16cxjf6y5i3xb"; depends=[]; }; icarus = derive2 { name="icarus"; version="0.3.0"; sha256="1656bz0av59dpgndibn0bc5zr9zka9pmw7qmhjz2b956bh7sh4ag"; depends=[]; }; @@ -7261,22 +7400,22 @@ in with self; { icenReg = derive2 { name="icenReg"; version="2.0.7"; sha256="1fc6l3mqnm4rcg49bk2plfa011g7nay71gzd4nxnjisifmw6qi2s"; depends=[coda foreach MLEcens Rcpp RcppEigen survival]; }; icensBKL = derive2 { name="icensBKL"; version="1.1"; sha256="12zx5x81jy48mp0l6a5ga0ikkjxvndv5cv2xf6d2lczfk7fz9lbp"; depends=[gtools Icens MASS mvtnorm smoothSurv survival TeachingDemos]; }; icensmis = derive2 { name="icensmis"; version="1.3.1"; sha256="1c0j43wffb5h99chlj8j45lpan7dpn2i0r4rr6b2kq16p1zabfjw"; depends=[Rcpp]; }; - icesAdvice = derive2 { name="icesAdvice"; version="1.4-0"; sha256="0ra25g6am75qh32rfjps59x31zwav98k5d4nf6gbam98cr7vr5h3"; depends=[]; }; + icesAdvice = derive2 { name="icesAdvice"; version="1.4-1"; sha256="0vhp4mh3isxibxr1i05vlxvrz53ni83s5khjvnk8i20dcri0501g"; depends=[]; }; icesDatras = derive2 { name="icesDatras"; version="1.2-0"; sha256="0arkn9ma03qb21sv5chmz5fj65da5ivqhvrg8bqibbky8zkix1vh"; depends=[]; }; icesSAG = derive2 { name="icesSAG"; version="1.3-2"; sha256="1w3v10qjs9jyn7dp6vsv8hyax8mn2b8y5afba4lcpzh0p8d2yzpm"; depends=[httr icesVocab openssl png xml2]; }; - icesTAF = derive2 { name="icesTAF"; version="1.5-0"; sha256="19xg24k4fz64ki8mxf9g0r49syqh97a98dfb9zgiga3da3f2rk4w"; depends=[httr]; }; + icesTAF = derive2 { name="icesTAF"; version="1.5-1"; sha256="0sj9wswpaxch195rnwav2qbk2f25xc2kdzf9xr6p8l0adxnijmki"; depends=[httr]; }; icesVocab = derive2 { name="icesVocab"; version="1.1-2"; sha256="15ha2visv44pphkahg766afafh6467lwznvppwkvqjrbfiijkc6l"; depends=[XML]; }; icmm = derive2 { name="icmm"; version="1.1"; sha256="1w9f1rniz67rrvq0akc64s5433ddmr2cgbcljil4c58yyz8hinx8"; depends=[EbayesThresh]; }; icosa = derive2 { name="icosa"; version="0.9.81"; sha256="05gpiksncdi536f4py7szfi6myny1gqj8i0hsgpma7cfcm3npn0l"; depends=[igraph raster Rcpp rgdal rgl sp]; }; icpsrdata = derive2 { name="icpsrdata"; version="0.3.0"; sha256="17sprbbi8fmvcp8d7hwrxl5amg0j036wq483cw62zbmni3p3fl82"; depends=[httr purrr rvest]; }; - icr = derive2 { name="icr"; version="0.5.2"; sha256="1qmr6sc56v7ywy01f2mdhdxv2yp6rnwhbq347lfhb4ikhax3znpy"; depends=[ggplot2 Rcpp reshape2]; }; + icr = derive2 { name="icr"; version="0.5.3"; sha256="178j4xyaxkzi6fxajw5qkab9ifabaj3lvhk2qqipb6n5p68cd9bn"; depends=[ggplot2 Rcpp reshape2]; }; icsw = derive2 { name="icsw"; version="0.9"; sha256="0lmq9l9sy0fz3yjj2sj8f19iy26913caibf7d9zb9w9n6cqskvlx"; depends=[]; }; idar = derive2 { name="idar"; version="1.0"; sha256="1yfv3na4rcldkpzybf7la227z4ynsl1scrziirl5gp072k7zrs01"; depends=[ape FD picante spatstat]; }; idbg = derive2 { name="idbg"; version="1.0"; sha256="1rxmj04hswxybrg7dfib3mjy8v8mdiv13zwbscp2q55z55hhf1m5"; depends=[]; }; - idbr = derive2 { name="idbr"; version="0.2"; sha256="1hhwn93arkzqs5ns9ll7rwqq5gyngixbicly9asw0dgjn12n5p7x"; depends=[countrycode dplyr httr jsonlite]; }; + idbr = derive2 { name="idbr"; version="0.3"; sha256="02syk7fmif0xnddl8189vnl329r8mwl3iwv2rsf6cw7mwg30fhyw"; depends=[countrycode dplyr httr jsonlite]; }; idealstan = derive2 { name="idealstan"; version="0.2.7"; sha256="1818vwlv5cr6qyg7p6kgyb996n89d2xr4cy6ys9pdhrp7lip9prr"; depends=[bayesplot BH dplyr ggplot2 lazyeval Rcpp RcppEigen rlang rstan rstantools shinystan StanHeaders stringr tidyr]; }; idefix = derive2 { name="idefix"; version="0.2.4"; sha256="0j64pmccg01lscvjg9z97ypv3svl4jbvs4819jn4kc9ni6gq4fai"; depends=[dplyr gtools MASS maxLik Rdpack scales shiny]; }; - idem = derive2 { name="idem"; version="3.0"; sha256="15k6gk3v2hijdfabc1c2xabm5v84hgs0p9lpddrpir3h5jzilr3i"; depends=[BH Rcpp RcppEigen rstan sqldf StanHeaders survival]; }; + idem = derive2 { name="idem"; version="3.5"; sha256="1fr456drfnla917byw0c8ppqrhq4i7gsd4idfasx6xx5fqhv7ypc"; depends=[BH Rcpp RcppEigen rstan sqldf StanHeaders survival]; }; idendr0 = derive2 { name="idendr0"; version="1.5.3"; sha256="11c12d166bp2i498d8y6ipg5jhz1xsdsrmnhjqnrqqzp9avvrsjp"; depends=[tkrplot]; }; identity = derive2 { name="identity"; version="0.2-1"; sha256="1j5wb5cj5j49in2g6r1shdm4ri4cfzj22hpqazvcmq4dm291sdi9"; depends=[]; }; ider = derive2 { name="ider"; version="0.1.0"; sha256="021s4fybki7a6mdsr6gkjrzfhaqdcg0m2a6r24y91jklxlxqxmws"; depends=[FNN]; }; @@ -7302,7 +7441,8 @@ in with self; { igraphtosonia = derive2 { name="igraphtosonia"; version="1.0"; sha256="0vy9jnpjp68l8s0hi1l57j9p41c543h3iqv16pwl550f38zqp8j6"; depends=[igraph]; }; iheatmapr = derive2 { name="iheatmapr"; version="0.4.3"; sha256="0124d7h8n83zb5kvvavccprlqknpqrd634zv7sz9s915xzhp7jgz"; depends=[fastcluster ggdendro htmlwidgets jsonlite knitr magrittr plyr RColorBrewer S4Vectors scales]; }; ihs = derive2 { name="ihs"; version="1.0"; sha256="1c5c9l6kdalympb19nlgz1r9zq17575ivp3zrayb9p6w3fn2i06h"; depends=[maxLik]; }; - ijtiff = derive2 { name="ijtiff"; version="0.3.0"; sha256="1c5pamxjmipgmqipnf0gg4yx7i0hjrb80c0mb2sjab4v05finz55"; depends=[checkmate fields filesstrings magrittr purrr Rcpp readr RSAGA stringr]; }; + iilasso = derive2 { name="iilasso"; version="0.0.1"; sha256="08d5j0dvi8k0hzn4xn4nzplc1fliqz11jd9i4pfj80ggl5dmc2x1"; depends=[BH Matrix Rcpp]; }; + ijtiff = derive2 { name="ijtiff"; version="1.1.0"; sha256="0hb201qcwynbdi2fzspvv9sdhyx0cypbsvhawhcwj5zqdp6f507f"; depends=[checkmate fields filesstrings magrittr purrr Rcpp readr rlang stringr]; }; iki_dataclim = derive2 { name="iki.dataclim"; version="1.0"; sha256="1yhvgr8d3j2r8y9c02rzcg80bz4cx58kzybm4rch78m0207wqs7p"; depends=[climdex_pcic lubridate PCICt zoo]; }; ilc = derive2 { name="ilc"; version="1.0"; sha256="0hs0nxv7cd300mfxscgvcjag9f2igispcskfknb7sn7p8qvwr5ki"; depends=[date demography forecast rainbow survival]; }; imPois = derive2 { name="imPois"; version="0.1.4"; sha256="07350zly4fyx2sf9cqpfpyy8l5kn96z49kzym81p2bmhq66d408h"; depends=[geometry rgl]; }; @@ -7313,9 +7453,10 @@ in with self; { imbalance = derive2 { name="imbalance"; version="1.0.0"; sha256="1pfhwf4844m0a8qsm852am63x18vlkbs6m1s9izrpd219616skpr"; depends=[bnlearn C50 FNN ggplot2 KernelKnn mvtnorm Rcpp RcppArmadillo smotefamily]; }; imfr = derive2 { name="imfr"; version="0.1.5"; sha256="1f4zynra79h42dmd9qhg67wwvs7c640f5is98bq30fdphiybihgz"; depends=[dplyr httr jsonlite]; }; imguR = derive2 { name="imguR"; version="1.0.3"; sha256="14f7ghgc8rbrpqb21rinfbrj1wh80i6ii0awwi814152v5qzj4b3"; depends=[httr jpeg png]; }; + iml = derive2 { name="iml"; version="0.3.0"; sha256="0jz3gw45lyb4ddw9pdfj797aipha2bwcmqrf7dyxx0ga3cfxv7ay"; depends=[checkmate data_table ggplot2 glmnet Metrics partykit R6]; }; immer = derive2 { name="immer"; version="0.8-5"; sha256="181mp407vy2ij35ggr1vi80y8ak6vyjplyvps1fdpxnanp1mqpw3"; depends=[CDM coda psychotools Rcpp RcppArmadillo sirt]; }; imp4p = derive2 { name="imp4p"; version="0.5"; sha256="0s1vq64qspni5fqzz781a1l8ldfbwhb57h8z4dr5k9bama5s3g6l"; depends=[imputeLCMD Iso Rcpp truncnorm]; }; - implyr = derive2 { name="implyr"; version="0.2.2"; sha256="1kqz8pzgdbyvngsbab3v578jxm01hqmh2ipcqxsv1h9j628mvqj8"; depends=[assertthat DBI dbplyr dplyr rlang]; }; + implyr = derive2 { name="implyr"; version="0.2.3"; sha256="0ap7qdnwm1gcfl67r6bfjmk9ji4z30plclwnwzlv5j7yx5si6lps"; depends=[assertthat DBI dbplyr dplyr rlang tidyselect]; }; r_import = derive2 { name="r_import"; version="1.1.0"; sha256="0blf9539rbfwcmw8zsb4k58slb4pdnc075v34vmyjw752fznhcji"; depends=[]; }; importar = derive2 { name="importar"; version="0.1.1"; sha256="0xv445fmjhsbdlsq03k2rlycnggn3rcyq5a49zrg4jvjamzr0rgr"; depends=[]; }; imprProbEst = derive2 { name="imprProbEst"; version="1.0.1"; sha256="09y8yd9sw0b79ca45ryi7p82vy5s8cx0gg603rlc39lgwcdv45i3"; depends=[inline lpSolve]; }; @@ -7325,15 +7466,15 @@ in with self; { imputeMulti = derive2 { name="imputeMulti"; version="0.6.4"; sha256="0ngjbj8pl5mwprrgy234a5p9dhf615z7ymfv8184hby1z6ib3mgl"; depends=[DBI gtools Rcpp RSQLite]; }; imputePSF = derive2 { name="imputePSF"; version="0.1.0"; sha256="0xfd2mybg0cbi3n35j28s4xq4iwr5rq4mqwgdqml7l2rlzidcwc8"; depends=[PSF]; }; imputeR = derive2 { name="imputeR"; version="2.0"; sha256="0xyvy785jb1mv06jq25cnsbgiywi3857sdiizcjck7bx970lk02n"; depends=[caret Cubist gbm glmnet mboost pls rda reshape2 ridge rpart]; }; - imputeTS = derive2 { name="imputeTS"; version="2.5"; sha256="1b0gpgg07hl4n5dnvqfjxk1zxgh93ykh7lz8l0szv5hbijidvqxp"; depends=[forecast Rcpp stinepack]; }; + imputeTS = derive2 { name="imputeTS"; version="2.6"; sha256="14hkz9y6r8nl036zwi8c7k54bbkyz7zmvnq8ln7pwl15kgpcadkf"; depends=[forecast Rcpp stinepack]; }; imputeTestbench = derive2 { name="imputeTestbench"; version="3.0.1"; sha256="0yxvwk1bcsid116a4zqsagf2dl3vhzva559bfjjcqdgyniapcmcj"; depends=[dplyr forecast ggplot2 imputeTS reshape2 tidyr zoo]; }; imputeYn = derive2 { name="imputeYn"; version="1.3"; sha256="1b21w1aa5f7yiq8k0wa86wvbg4ij7f6ldwn6asfqwb0b90rvsgvs"; depends=[boot emplik mvtnorm quadprog survival]; }; in2extRemes = derive2 { name="in2extRemes"; version="1.0-3"; sha256="1lgsqm29zmjyf8kynyra2p3q7bs4fyd7ac4v6s3pbahzhhzdk94y"; depends=[extRemes]; }; - inTrees = derive2 { name="inTrees"; version="1.1"; sha256="1b88zy4rarcx1qxzv3089gzdz1smga6ssj8cxxccyyzci6px85j1"; depends=[arules gbm RRF xtable]; }; + inTrees = derive2 { name="inTrees"; version="1.2"; sha256="1mwn2ijkyw0y9xcgrr56wxd2326ikarlsi79l59dplvlx2iwbi6c"; depends=[arules data_table gbm RRF xgboost xtable]; }; inaparc = derive2 { name="inaparc"; version="0.2.0"; sha256="0rgbnvvqzbx4j40qz32l1bxmg3wwzbl6719wb9m3xpakblvhhxs2"; depends=[kpeaks lhs]; }; inarmix = derive2 { name="inarmix"; version="0.4"; sha256="11a1vaxq22d5lab07jp5pw0znkaqj6bmkn6vsx62y6m4mmqk04yr"; depends=[Matrix Rcpp]; }; inbreedR = derive2 { name="inbreedR"; version="0.3.2"; sha256="09fr13ckyn2skiigkn4qdx5g080gcmyyrvzhcp0wrml9wpmy0h4z"; depends=[data_table]; }; - incR = derive2 { name="incR"; version="1.0.2"; sha256="07v0jg3cw04qnblpr3zslfwxw8ng444f5545q4yznnbdw8wfmk8x"; depends=[dplyr lubridate maptools rgeos]; }; + incR = derive2 { name="incR"; version="1.1.0"; sha256="0q41bs7pf6hqyfwvcwc2sxq44jq95qq3qsddz53f8gphwjsyf1v7"; depends=[dplyr ggplot2 lubridate maptools rgeos]; }; inca = derive2 { name="inca"; version="0.0.3"; sha256="1g9js84xa5b6jl8gp4k0c55kjazfaw5g9biwk4v6vz3vwkwayyzh"; depends=[Matrix Rcpp RcppArmadillo]; }; incadata = derive2 { name="incadata"; version="0.6.1"; sha256="05i0zifdzc1w6p6annhzp9rdd4v82gx2sxi4lqpdnraaczdrhgbb"; depends=[backports decoder dplyr rccmisc rvest sweidnumbr xml2]; }; incgraph = derive2 { name="incgraph"; version="1.0.1"; sha256="0zjvxk2krdlm5bcr0m80nxy46f69a1xadfjw5sjw249b28wdclml"; depends=[BH dplyr orca purrr Rcpp testthat tibble]; }; @@ -7341,7 +7482,8 @@ in with self; { inctools = derive2 { name="inctools"; version="1.0.11"; sha256="08a1aqsx1f1mkykpgbqbgvai60zxj9zwpmxynyajbm4lwr3rc6rp"; depends=[cubature doParallel dplyr foreach ggplot2 glm2 magrittr plyr pracma tmvtnorm]; }; indelmiss = derive2 { name="indelmiss"; version="1.0.8"; sha256="0674hvgdq0fxab3h55iililphrr6lqp25359crvkqqgb8higbs0h"; depends=[ape numDeriv phangorn Rcpp]; }; indicspecies = derive2 { name="indicspecies"; version="1.7.6"; sha256="0a7s37k3bg4cnzkvn833nrwi6hnfa5f6jxa8ra954v4sp55g6i5d"; depends=[permute]; }; - inegiR = derive2 { name="inegiR"; version="1.2.0"; sha256="14mpjyc85l9sznhn29cxk37l3y5yxclqiv2kgcwf8prpxfgwy83l"; depends=[jsonlite plyr XML zoo]; }; + indirect = derive2 { name="indirect"; version="0.2.0"; sha256="1k7xwsx655nzl43s1mkaysyn5gydq973gynmqip67lssnm7cnch4"; depends=[gplots MASS]; }; + inegiR = derive2 { name="inegiR"; version="2.0.0"; sha256="00bhb3zvqhir2rqza3axk98lxhq98s41apwpsm242pqb7wsnmg95"; depends=[jsonlite plyr XML zoo]; }; ineq = derive2 { name="ineq"; version="0.2-13"; sha256="09fsxyrh0j7mwmb5hkhmrzgcy7kf85jxkh7zlwpgqgcsyl1n91z0"; depends=[]; }; infer = derive2 { name="infer"; version="0.1.1"; sha256="1ln2vw4d4xcy9g6cv594glrrcqwmjynv0mfq6nsl1h94gz8wnh8a"; depends=[assertive dplyr ggplot2 magrittr rlang tibble]; }; inference = derive2 { name="inference"; version="0.1.0"; sha256="0j92isfkbhk13yx2hd3a5dd7ikcbgjc04zisd1n5kmg6ajw2aj6r"; depends=[sandwich]; }; @@ -7349,7 +7491,7 @@ in with self; { inferr = derive2 { name="inferr"; version="0.3.0"; sha256="1z5bfq0gv1h6iw8nwc19ar6f2sgsvgs3ghq52s09wclqk2yy4azz"; depends=[dplyr magrittr purrr Rcpp rlang shiny tibble tidyr]; }; inflection = derive2 { name="inflection"; version="1.3"; sha256="168ms6hfakr6wql45r9qvk7hpas6sgpaiqyxicihsq0j3dpzvys4"; depends=[]; }; influence_ME = derive2 { name="influence.ME"; version="0.9-9"; sha256="0f6d2hvs9qllyfpsp2cgh7w8yjxafclbk47n8av7j9zpp7s5yg9v"; depends=[lattice lme4 Matrix]; }; - influence_SEM = derive2 { name="influence.SEM"; version="2.1"; sha256="1qhv640lngwrbdfqvw2x0x4zwv0aqzxwyfdpnivzjf5pw58nya5s"; depends=[lavaan]; }; + influence_SEM = derive2 { name="influence.SEM"; version="2.2"; sha256="1cabl6486mlrmk0418s18wii3n6nl1ckv6w9281wdk4fy27y9qk2"; depends=[lavaan]; }; influenceR = derive2 { name="influenceR"; version="0.1.0"; sha256="12p9362hkndlnz1rd8j2rykg57kbm6l7ks60by3rd25xg50k5jag"; depends=[igraph Matrix]; }; influxdbr = derive2 { name="influxdbr"; version="0.14.2"; sha256="03dzw86mvbc8w38q9skjki1z17vc04k9q8dx7sd3xg6xbr10f9d9"; depends=[dplyr httr jsonlite magrittr purrr rlang tibble tidyr xts zoo]; }; infoDecompuTE = derive2 { name="infoDecompuTE"; version="0.6.0"; sha256="1gmsf4gw6xf70sh7y5hagkavknp80293sb7wgx6lycngq2acmi4w"; depends=[MASS]; }; @@ -7364,7 +7506,7 @@ in with self; { inlabru = derive2 { name="inlabru"; version="2.1.3"; sha256="09sdbzg3cdg43clkwnahkhyns019gjya55m6zhq340mgrnirx2i5"; depends=[ggplot2 rgdal rgeos sp]; }; inline = derive2 { name="inline"; version="0.3.14"; sha256="0cf9vya9h4znwgp6s1nayqqmh6mwyw7jl0isk1nx4j2ijszxcd7x"; depends=[]; }; inlinedocs = derive2 { name="inlinedocs"; version="2013.9.3"; sha256="13vk6v9723wlfv1z5fxmvxfqhaj68h0x3s2qq9j6ickr4wakb4ar"; depends=[]; }; - inlmisc = derive2 { name="inlmisc"; version="0.3.5"; sha256="0m215fgyh17nbp2cqmyism3i77rgqkpdggc6fnpn3njxgw7wyb9m"; depends=[checkmate dplyr GA htmlwidgets igraph knitr leaflet raster rgdal rgeos sp]; }; + inlmisc = derive2 { name="inlmisc"; version="0.4.0"; sha256="0hhw87zvqd2mplpbmbh1y91pyfgyqamw4wiz74a6qwn705bcymah"; depends=[checkmate dplyr GA htmltools htmlwidgets igraph knitr leaflet raster rgdal rgeos sp xtable]; }; inpdfr = derive2 { name="inpdfr"; version="0.1.6"; sha256="0fwznjsq4wccqfnb3a5ic1nyx538jxmlcv59xdz06y6raczjp9q9"; depends=[ca cluster entropart metacom R_devices RColorBrewer SnowballC stringi tm wordcloud]; }; insideRODE = derive2 { name="insideRODE"; version="2.0"; sha256="1ffndk8761cpkririb3g1qsq9nwmh82lcrpql9i5fksdprvdjzcw"; depends=[deSolve lattice nlme]; }; insol = derive2 { name="insol"; version="1.1.1"; sha256="0zbawkp4qb0kqb7y9ibiyy8sa9rfgbzwmcdswx6s87p0h7brrqn6"; depends=[]; }; @@ -7377,7 +7519,7 @@ in with self; { intRvals = derive2 { name="intRvals"; version="1.0.0"; sha256="0391raj5wq6issvzqm8bfnv1ap2hh5nfsqi9r1x5ss37fvcq5fjm"; depends=[lme4 plyr]; }; intamap = derive2 { name="intamap"; version="1.4-1"; sha256="1shyxlps1rxqavrvg55gw0c9115q0j3yw78ilavig7036zx5lazv"; depends=[automap doParallel evd foreach gstat MASS mvtnorm rgdal sp]; }; intamapInteractive = derive2 { name="intamapInteractive"; version="1.1-12"; sha256="1h8kzinfpp2rwal11xqs9g99rmigs0jlsr5h0qh0zsill73minid"; depends=[automap gstat intamap rgdal sp spatstat spcosa]; }; - intccr = derive2 { name="intccr"; version="0.2.0"; sha256="0sm66c0ivvky01k5v28k7rc6ba15jpnalhgc019nbrly1s5kyqcy"; depends=[alabama doParallel foreach]; }; + intccr = derive2 { name="intccr"; version="1.0.0"; sha256="1y3rrxr9m8s6xvg4j8w9a2673kl1g5mmzz2p5dxjr6ddlfl8aji3"; depends=[alabama doParallel foreach numDeriv]; }; integIRTy = derive2 { name="integIRTy"; version="1.0.5"; sha256="13p1r3rccsmaqwn0mrskr86jpww72aaq8zf2a8rnbpzkfrq9ni14"; depends=[abind doParallel foreach ltm MASS mclust]; }; interAdapt = derive2 { name="interAdapt"; version="0.1"; sha256="06ki36l1mrnd9lbm696a6gapr488dz8na4wvl9y1fif9hfv4zk25"; depends=[knitcitations knitr mvtnorm RCurl shiny]; }; interactionTest = derive2 { name="interactionTest"; version="1.0.1"; sha256="021qsg9rglc4vj3hkrvfm2snd77zna7ql2i0m5hf77yzxxc35jc6"; depends=[]; }; @@ -7388,7 +7530,7 @@ in with self; { intergraph = derive2 { name="intergraph"; version="2.0-2"; sha256="1ipxdrfxhcxhcbqvrzqh3impwk4xryqlqlgjl7f2mwrf365zs6ph"; depends=[igraph network]; }; interim = derive2 { name="interim"; version="0.7.0"; sha256="05hgypckfjb9pr60cv6m8lgqibdkgksw13gy8g1rmd9njs6qcb8i"; depends=[]; }; internetarchive = derive2 { name="internetarchive"; version="0.1.6"; sha256="1cx9dxlrdz1xak4jrrjs2wsq6ml8n2xl0n0s6n9h3g247j4lfvnm"; depends=[dplyr httr]; }; - interp = derive2 { name="interp"; version="1.0-30"; sha256="1gzxh0xz0zdw5fr9m4w4w99rg540bljwkcmlla4pc0974d6fcg6i"; depends=[deldir Rcpp RcppEigen]; }; + interp = derive2 { name="interp"; version="1.0-31"; sha256="0zrqlzsl71fggwy8qvhggzxphbc7ld2gahsh8h5aawvkpfz5jm8k"; depends=[deldir Rcpp RcppEigen]; }; interplot = derive2 { name="interplot"; version="0.1.5"; sha256="0svhs7mj987vravirhmp4788qvqm32v614qj7q06b2y4va477yj8"; depends=[abind arm dplyr ggplot2]; }; interpretR = derive2 { name="interpretR"; version="0.2.4"; sha256="0nfh3pyr7nn0r41xk0mfb4fs5rjkbh43lbw14x7pdmbgzpgsc22c"; depends=[AUC randomForest]; }; interval = derive2 { name="interval"; version="1.1-0.1"; sha256="1lln9jkli28i4wivwzqrsxvv2n15560f7msjy5gssrm45vxrxms8"; depends=[Icens MLEcens perm survival]; }; @@ -7406,7 +7548,7 @@ in with self; { investr = derive2 { name="investr"; version="1.4.0"; sha256="0l47bfwxssfr3maprkpwnmgxnxccl3ch4grc7f968iiqk83mcxw9"; depends=[nlme]; }; invgamma = derive2 { name="invgamma"; version="1.1"; sha256="12ga2y4wc9bc5zz6vimvxwgjpsx3ys3209nq63gscbw559ydxa5a"; depends=[]; }; io = derive2 { name="io"; version="0.3.0"; sha256="16mnbxq217ixfg2qfqrj97qqfpc5dj622hf80nwray6hp47lbw2s"; depends=[filenamer stringr]; }; - ioncopy = derive2 { name="ioncopy"; version="2.0.1"; sha256="1iy4a894yp91f7sm89hvr9sh69abjrygx4yaks1d405vbfxa6z58"; depends=[multtest shiny]; }; + ioncopy = derive2 { name="ioncopy"; version="2.1.1"; sha256="1lkav3xvh2qazfmcxwisrjy8wzf639a4md71499jj5rmy650crys"; depends=[shiny]; }; ionflows = derive2 { name="ionflows"; version="1.1"; sha256="1k9yz82hbjwljyg4cmi675ppykrc2yq9md8x1hhkfxmp070whcxl"; depends=[Biostrings]; }; ionicons = derive2 { name="ionicons"; version="0.1.1"; sha256="0v7icjx2bpb0hd3j8a14lijklyjkmw7qgp336z66wzscm6f411ip"; depends=[png rsvg xml2]; }; ionr = derive2 { name="ionr"; version="0.3.0"; sha256="18rv5n5gihb6pz36s45yj17sdjsbj4485k4lnggdjj1gbbjkz2ni"; depends=[gplots psych]; }; @@ -7428,12 +7570,12 @@ in with self; { ipw = derive2 { name="ipw"; version="1.0-11"; sha256="11a34j6lp329ran2r9kxn8184kfmibkdig74lsy6lj4w4w0d71cm"; depends=[geepack MASS nnet survival]; }; ipwErrorY = derive2 { name="ipwErrorY"; version="1.0"; sha256="1n1j1crxnnfkg38drgg8rhc13y6s8hcsr5g0f6hi4v680dgrkhmp"; depends=[nleqslv]; }; iqLearn = derive2 { name="iqLearn"; version="1.4"; sha256="0vgnfr6x6f6qlnag63brnkdymlmm2vbkl8fg02w98qsc48lal454"; depends=[]; }; - iqspr = derive2 { name="iqspr"; version="2.3"; sha256="190d0mc36l3ggh62km3z7ylhi9f0wp4brkwmm72qjqbm1przvk0w"; depends=[doParallel fingerprint ggplot2 glmnet gridExtra kernlab ranger rBayesianOptimization rcdk tictoc xgboost]; }; irace = derive2 { name="irace"; version="2.4"; sha256="07xzg4jcq0rjdq1drs3xh02y29z1gmkjkw54apmaqzc0s1pwzkk4"; depends=[]; }; ircor = derive2 { name="ircor"; version="1.0"; sha256="07apa4l4ib11xw25d44b403s3la29sqlid13q41hjrlfxafm91ld"; depends=[]; }; irlba = derive2 { name="irlba"; version="2.3.2"; sha256="0f7wb12wa0zbyllk5adcf4f517wgjpkhsx4j176i9ax6xy7jvprz"; depends=[Matrix]; }; irr = derive2 { name="irr"; version="0.84"; sha256="0njxackqj8hyf9j1yszwxbnaxgp27fc2bwyyf7dip72wc12f81n5"; depends=[lpSolve]; }; - irtDemo = derive2 { name="irtDemo"; version="0.1.3"; sha256="057m8p6qnws09kbq30712hfqkdyqkshpc4vprmj65mrdx6kwvqr7"; depends=[fGarch shiny shinydashboard]; }; + irrNA = derive2 { name="irrNA"; version="0.1.4"; sha256="1i7s4c285dw1s2kiq01a81cfpd2v40y26yklr06xlmqp28iwslbr"; depends=[irr]; }; + irtDemo = derive2 { name="irtDemo"; version="0.1.4"; sha256="0rpwryybnj7b4bxn0mn1m496y85s2fpqdd78lmdl6jg1ck4j4pb3"; depends=[fGarch shiny]; }; irtProb = derive2 { name="irtProb"; version="1.2"; sha256="12wnvbzkh0mx9i3iyh1v2n2f2wjsjj7ad3dgv9xj949x4nbz16j0"; depends=[lattice moments]; }; irtoys = derive2 { name="irtoys"; version="0.2.1"; sha256="0h6iiaxikhbxhbyksbjnb09qdxinlkwr2v9yzs5wslbni14paq5q"; depends=[ltm sm]; }; irtrees = derive2 { name="irtrees"; version="0.1.0"; sha256="03jmfyx1ia987zhi74fmmcdz70wnm8c7z5z30rwzd1cs11dijjwv"; depends=[]; }; @@ -7444,7 +7586,7 @@ in with self; { isingLenzMC = derive2 { name="isingLenzMC"; version="0.2.5"; sha256="1pd1s3a1rv7vlxd5db1pgwdjps8w5im4zz2h3qzal9cwbis0hb51"; depends=[]; }; island = derive2 { name="island"; version="0.1.3"; sha256="1wb44zyfkgk62aidw5qg660473dxh9nyahmxzxn7ffmi8a0hmdnf"; depends=[]; }; ismev = derive2 { name="ismev"; version="1.41"; sha256="19vmjgz1baqkryi34ffhjznc46z3zwqaqblwafhk9fd50xgn4bi6"; depends=[mgcv]; }; - isni = derive2 { name="isni"; version="0.1"; sha256="0xqz5ha6ca02xk5n0c8awx8m7zibrb6h2mwwsr44jchdb3dj39sr"; depends=[matrixcalc mvtnorm nlme nnet numDeriv]; }; + isni = derive2 { name="isni"; version="0.2"; sha256="1092sz4xskrvpxlkxnd8s7lzwqy1qnim63lzx55sspqcwdbry5hn"; depends=[Formula matrixcalc mvtnorm nlme nnet]; }; isnullptr = derive2 { name="isnullptr"; version="1.0.1"; sha256="0kwjxq59n3qncdw63vsdvz7v5mzbl5lmckdfgiiw35pzmahnxzh9"; depends=[]; }; isocir = derive2 { name="isocir"; version="2.0-6"; sha256="0dkxdx2g1c579q97r45shws2gylkwqlvrhmc14ddmzi45xhxlql6"; depends=[circular combinat TSP]; }; isopam = derive2 { name="isopam"; version="0.9-13"; sha256="0y1yy0922kq5jxyc40gz8sk9vlzwfkfg5swmc6lk4007g9mgc8fm"; depends=[cluster vegan]; }; @@ -7452,10 +7594,11 @@ in with self; { isoph = derive2 { name="isoph"; version="1.1.2"; sha256="1qw98cnil3rb9d3vbii8drca744qig6bfd3rc74dxm23cj86f66g"; depends=[Iso survival]; }; isotone = derive2 { name="isotone"; version="1.1-0"; sha256="0alk0cma5h3yn4w2nqcahprijsm89b0gby9najbngzi5vnxr6nvn"; depends=[nnls]; }; isotonic_pen = derive2 { name="isotonic.pen"; version="1.0"; sha256="1lgw15df08f4dhrjjfr0jqkcvxwad92kflj2px526pcxwkj7cj3i"; depends=[coneproj Matrix]; }; + isqg = derive2 { name="isqg"; version="1.0"; sha256="0ym3d916lpr1bmmla599xg13c8k0wvyi7b6jhzlrxi6nj5ci0vad"; depends=[BH R6 Rcpp]; }; isva = derive2 { name="isva"; version="1.9"; sha256="05qx9q0kg4ma23v4abhihw0vz017nq6hv2jzsiqx4d20ngh1dl4z"; depends=[fastICA JADE qvalue]; }; italy = derive2 { name="italy"; version="0.1.0"; sha256="0is90xp6980ja12jzi3816jq1y90ifcw6cvfmybb7invj6rr1cks"; depends=[]; }; itan = derive2 { name="itan"; version="1.0"; sha256="082vh5gvh8hgyhk8nswll16ldhnp0pfpxnz1yx05zsc4nzvm92cf"; depends=[ggplot2 reshape]; }; - itcSegment = derive2 { name="itcSegment"; version="0.7"; sha256="15im0aqnl73c7gg6v4al40mappfsb4axfxclpzmdganvr6fccvay"; depends=[maptools raster rgeos sp]; }; + itcSegment = derive2 { name="itcSegment"; version="0.8"; sha256="032wj34313m3wigdfalq356srdzg0cvnvxnaxwxws6bc44r78izf"; depends=[maptools raster rgeos sp]; }; iteRates = derive2 { name="iteRates"; version="3.1"; sha256="1dycmlm3vldc60wz2jjdfbla14383911zfahgal5mx8whxwq95c5"; depends=[ape apTreeshape geiger gtools MASS partitions VGAM]; }; iterLap = derive2 { name="iterLap"; version="1.1-3"; sha256="079d4hxf1ha8pgibzb4r1yk7xqpzndd7hjbp8294qb26jvvcnd8q"; depends=[quadprog randtoolbox]; }; iterators = derive2 { name="iterators"; version="1.0.9"; sha256="16sycjq912ix52fjxjhcwiaqr0yj1v5iqmrvjljd3z857031w06y"; depends=[]; }; @@ -7482,11 +7625,11 @@ in with self; { jagsUI = derive2 { name="jagsUI"; version="1.4.9"; sha256="1c2fq7q3kvf092j6r9ci0gigjpb61dj19phzm8mqi05q2k08siin"; depends=[coda lattice rjags]; }; james_analysis = derive2 { name="james.analysis"; version="1.0.1"; sha256="1b2n4ds4ivfk564z87s2rxjl9j0y4drd3cmyv8jqpccmdvx1137d"; depends=[naturalsort rjson]; }; janeaustenr = derive2 { name="janeaustenr"; version="0.1.5"; sha256="1wyn4qc28a3sval8shmyi2d7s4nl3jh96s8pzq871brxcmrncbwr"; depends=[]; }; - janitor = derive2 { name="janitor"; version="0.3.1"; sha256="0s2inn0apzwrvm5dvvdh36n9fhhrwvfbs6f3fn6byrbd713xl7rq"; depends=[dplyr magrittr tidyr]; }; + janitor = derive2 { name="janitor"; version="1.0.0"; sha256="0q6mq8s8k7yyx2459nhjvlxjaqxn61k3dpxdhcq0fyk37dafva79"; depends=[dplyr magrittr purrr rlang snakecase tidyr]; }; jaod = derive2 { name="jaod"; version="0.1.0"; sha256="0wh1nlfhks4c1dga6h7554pg44pamj73x5in71k2xw0yp292zm6x"; depends=[crul jsonlite tibble]; }; jcext = derive2 { name="jcext"; version="0.1"; sha256="18vmf57l2kv3rvi6laqp948m8mjkdxdy0vi4xp68480b2mjmvij1"; depends=[ggplot2 maps RColorBrewer rworldmap sp stringr]; }; jcolors = derive2 { name="jcolors"; version="0.0.2"; sha256="0d71sdvj7hwafj0sx2z1nyza5j2lfd8y5yj1p94yrw32wi7b89jn"; depends=[ggplot2 scales]; }; - jdx = derive2 { name="jdx"; version="0.1.2"; sha256="0963h1ppasw5psxgxzav0mnwc5gq0ah5xv5cyhnm8d1a66svn6pw"; depends=[rJava]; }; + jdx = derive2 { name="jdx"; version="0.1.3"; sha256="0d9m0sbdrlh8jfijn5mrfw8y2bpj5vxm0bcjlcc42ipxj47962l9"; depends=[rJava]; }; jetset = derive2 { name="jetset"; version="3.4.0"; sha256="0c99h5npsv2gf5d59s4qhkaqmjhbwa3prcykk24wzhnpfq6y6xhp"; depends=[AnnotationDbi org_Hs_eg_db]; }; jiebaR = derive2 { name="jiebaR"; version="0.9.1"; sha256="1qv4k5fgi40ppivdk3mxkhawyf2443h2lz5b9gvai9sqj6vf0s8k"; depends=[jiebaRD Rcpp]; }; jiebaRD = derive2 { name="jiebaRD"; version="0.1"; sha256="1wadpcdca4pm56r8q22y4axmqdbb2dazsh2vlhjy73rpymqfcph4"; depends=[]; }; @@ -7494,8 +7637,8 @@ in with self; { jmetrik = derive2 { name="jmetrik"; version="1.0"; sha256="0xnbvby03fqbxgg0i0qxrrzjv98783n6d7c1fywj81x487qlj77j"; depends=[]; }; jmotif = derive2 { name="jmotif"; version="1.0.3"; sha256="1llmrksajrd35kfdzq2vqfm17yv5kwark6gz3rvyzcmbrqk5spqv"; depends=[Rcpp RcppArmadillo]; }; jmuOutlier = derive2 { name="jmuOutlier"; version="1.4"; sha256="1vrihjvq8l2q7d3z80fkzzzwg6xmnfi8sipsgwic1lcbv6vnqndp"; depends=[]; }; - jmv = derive2 { name="jmv"; version="0.8.1.16"; sha256="1m7h0sbva865ki2wf0sxlb6bl1qw936grks2g4h82i2xq9nrlrhh"; depends=[afex BayesFactor car emmeans GGally ggplot2 ggridges GPArotation jmvcore lavaan multcomp mvnormtest PMCMR psych R6 vcd vcdExtra]; }; - jmvcore = derive2 { name="jmvcore"; version="0.8.1.6"; sha256="1k1w4c0c8ayjzhbi4fqxr2pcynf73jhkr4wc933nijhkyd6w8m29"; depends=[base64enc R6 rjson]; }; + jmv = derive2 { name="jmv"; version="0.8.6.2"; sha256="0an3ni6lz85cfcra69mycka6x1hgaas6rv6ybbnikmrv846sx03n"; depends=[afex BayesFactor car emmeans GGally ggplot2 ggridges GPArotation jmvcore lavaan MASS multcomp mvnormtest nnet PMCMR psych R6 ROCR vcd vcdExtra]; }; + jmvcore = derive2 { name="jmvcore"; version="0.8.5"; sha256="0w1d18qrb8aimkzv7imnj9yfdmz7ppdvaiadsaprackch16s91kx"; depends=[base64enc R6 rjson]; }; jocre = derive2 { name="jocre"; version="0.3.3"; sha256="1i9n3r16pq6r4sy3fc1rxpil5ws8v2is0xdxafinvwr1hzkv1gz6"; depends=[boot KernSmooth plyr TSP]; }; joinXL = derive2 { name="joinXL"; version="1.0.1"; sha256="1l76bckjz5r1kdsh0s10i0gpca12rkfkp14346fn7avdcw73v23i"; depends=[data_table openxlsx R_utils rChoiceDialogs Rcpp readxl rJava timeDate timeSeries]; }; joineR = derive2 { name="joineR"; version="1.2.3"; sha256="0cg7bfn0hb7ayx2s7myja5qzdvsbzyk8fbb1x5z0fp21gyrpfz18"; depends=[lattice MASS nlme statmod survival]; }; @@ -7506,8 +7649,8 @@ in with self; { jointNmix = derive2 { name="jointNmix"; version="1.0"; sha256="0ibh7hqkpzlfk3bk4d2dd64jhr8cvw563k082vwnljiam7k5nj4b"; depends=[]; }; jointPm = derive2 { name="jointPm"; version="2.3.1"; sha256="1c2cn9sqwfyv9ksd63w8rrz0kh18jm2wv2sfdkgncjb7vfs4hbv9"; depends=[]; }; jointseg = derive2 { name="jointseg"; version="1.0.1"; sha256="0wa531b5shrxhnzflfjqn2wypfb565qc2c8wngysgrgyj1kjq1pl"; depends=[acnr DNAcopy matrixStats]; }; - jomo = derive2 { name="jomo"; version="2.5-3"; sha256="1ig6r4sc4c2vf3h51by78610c5yqd7ap8gqcf0hswn3h2zsf6vm8"; depends=[lme4 survival]; }; - jose = derive2 { name="jose"; version="0.1"; sha256="1cvrjcx902pbh9xryph1kilmyf0rmbk671jvqd19a2kfwpcw7gqc"; depends=[jsonlite openssl]; }; + jomo = derive2 { name="jomo"; version="2.6-1"; sha256="1pcac6kbag4as28l557h702kc78mr0iz4m4rkhcx602l7dch8gd8"; depends=[lme4 survival]; }; + jose = derive2 { name="jose"; version="0.2"; sha256="0vgmr5kmps6yk10bbzrxz2d3y7jk0w1rxpm9gx510kpnqbj325xz"; depends=[jsonlite openssl]; }; jpeg = derive2 { name="jpeg"; version="0.1-8"; sha256="05hawv5qcb82ljc1l2nchx1wah8mq2k2kfkhpzyww554ngzbwcnh"; depends=[]; }; jpmesh = derive2 { name="jpmesh"; version="1.1.0"; sha256="01f0020ghl1f5fsri54gni15b36fg9vkr4xj43vy881sv11c5yr8"; depends=[dplyr leaflet miniUI purrr rlang sf shiny tibble tidyr units]; }; jpndistrict = derive2 { name="jpndistrict"; version="0.3.0"; sha256="0vnawpkrkhv0vjvw49ldn86qy07pqsdw7mmq13h3l4qw5jmfsd9i"; depends=[dplyr jpmesh leaflet magrittr miniUI purrr readr rlang sf shiny stringi tibble tidyr]; }; @@ -7519,16 +7662,17 @@ in with self; { jsonld = derive2 { name="jsonld"; version="1.2"; sha256="1y4574ai4m31x4yjx5bp9i8wfgcgjgfr8jn5nn0x6qzlnjg58gyz"; depends=[curl jsonlite V8]; }; jsonlite = derive2 { name="jsonlite"; version="1.5"; sha256="00lfg464jhf7k01bal9pcjvbdf5cxk6xi2h46hccp1x3h883g434"; depends=[]; }; jsonvalidate = derive2 { name="jsonvalidate"; version="1.0.0"; sha256="08c1s8fk95np4l6km077dmd1nibhhggi80f5465hhbq521gm0awl"; depends=[V8]; }; + jsr223 = derive2 { name="jsr223"; version="0.3.1"; sha256="030dp51fh9b7r4f7ad9drln73m3mhg2zh5fh053d65hzyszrqyqg"; depends=[curl jdx R6 rJava]; }; jtGWAS = derive2 { name="jtGWAS"; version="1.5.1"; sha256="06cgsncgrqslxcc7s0lb3zwa85bhzkmjzz3f04716xpzwa186vxq"; depends=[Rcpp]; }; jtools = derive2 { name="jtools"; version="0.9.4"; sha256="0vljw3n1ykvf3f2ydar9rb24cgiqljh195g2jc4dx77zy1kcfh4d"; depends=[ggplot2]; }; jtrans = derive2 { name="jtrans"; version="0.2.1"; sha256="18zggqdjzjhjwmsmdhl6kf35w9rdajpc2nffag4rs6134gn81i3m"; depends=[]; }; jug = derive2 { name="jug"; version="0.1.7"; sha256="01m6hyr26f6zih49pz2bmmr8ypdl1qiz0wv3padcy68kaccf44a4"; depends=[base64enc httpuv infuser jsonlite magrittr mime R6 webutils]; }; - junctions = derive2 { name="junctions"; version="1.0"; sha256="13vqmy4968hpxi6vs3kfgd802miw8navcvsjmak6knwa2mjhhd54"; depends=[Rcpp]; }; + junctions = derive2 { name="junctions"; version="1.0.1"; sha256="1mfzhizfzpsrlc23kdi658a1svw4p3wh1la7zpf5fk2bbksw0v97"; depends=[Rcpp]; }; junr = derive2 { name="junr"; version="0.1.3"; sha256="0wcglpziyi6z4n7w70srziljba3jkb27iqxbxz4kk6774c7valbf"; depends=[httr jsonlite]; }; jvnVaR = derive2 { name="jvnVaR"; version="1.0"; sha256="0zh0dc6wqlrxn5r2yv9vkpyfb8xsbdidkjv9g6qr94fyxlbs4yci"; depends=[]; }; jwutil = derive2 { name="jwutil"; version="1.1.1"; sha256="114vph86722v89iwyla7skl06cv87ymfy6nmca5iyxwx1z78zddz"; depends=[checkmate Rcpp]; }; kSamples = derive2 { name="kSamples"; version="1.2-7"; sha256="0f19rjngk0lg6s8c6h5l55qpxp8sl4vxj3kpi05cizzncny9b9bj"; depends=[SuppDists]; }; - kableExtra = derive2 { name="kableExtra"; version="0.7.0"; sha256="1rj41kcvc46nn6fvqhsc9v1snq2phh09vchkdng1avbm3g5sld62"; depends=[htmltools knitr magrittr readr rmarkdown rvest scales stringr viridisLite xml2]; }; + kableExtra = derive2 { name="kableExtra"; version="0.8.0"; sha256="01m2h8ms83h5zmy9rys0dal9y77fk7bk1f3k1l2vsg2krb5wxagv"; depends=[htmltools knitr magrittr readr rmarkdown rstudioapi rvest scales stringr viridisLite xml2]; }; kader = derive2 { name="kader"; version="0.0.8"; sha256="15f2swgngw5rdjdsh5kd55wm2nivlfs8pv4mdn0b75qihwgg1zkk"; depends=[]; }; kamila = derive2 { name="kamila"; version="0.1.1.2"; sha256="0mcray8byifjddsmwzmcpmw3zpm1y8q3nfrgpgacb36rwprqkj6z"; depends=[abind gtools KernSmooth mclust plyr Rcpp]; }; kangar00 = derive2 { name="kangar00"; version="1.1"; sha256="1rm3mjghgfq8fliha6flqvcb6m4xag1697c0q5smg515453l0s0p"; depends=[bigmemory biomaRt CompQuadForm data_table igraph KEGGgraph lattice sqldf]; }; @@ -7540,16 +7684,18 @@ in with self; { karaoke = derive2 { name="karaoke"; version="1.0"; sha256="1kx11lijdffhhh8prjgsamshgg2v29b2i129fjqi079waa335352"; depends=[seewave tuneR]; }; kazaam = derive2 { name="kazaam"; version="0.1-0"; sha256="0j7vysnmiv9sggcxdn3nrgfvyl52pza4kkjnsa0xlb3fzq9qpwlz"; depends=[pbdMPI]; }; kcirt = derive2 { name="kcirt"; version="0.6.0"; sha256="1gm3c89i5dq7lj8khc12v30j1c0l1gwb4kv24cyy1yw6wg40sjig"; depends=[corpcor mvtnorm snowfall]; }; - kdecopula = derive2 { name="kdecopula"; version="0.9.1"; sha256="0qbrm4b2ijyp7fmljz8m918zkv5aywm549lbwjk3rk8isvaac10m"; depends=[lattice locfit qrng quadprog Rcpp RcppArmadillo]; }; + kde1d = derive2 { name="kde1d"; version="0.1.2"; sha256="0n28xkkhl9mfd0bcgfv181j9lqk0aiim2irnwn654fpz0y6rwhnh"; depends=[BH cctools qrng Rcpp RcppEigen]; }; + kdecopula = derive2 { name="kdecopula"; version="0.9.2"; sha256="0g5c12wm3byd4chd8i9mxv599gsf4ip4qghx83j3mmhsmn05zf4y"; depends=[lattice locfit qrng quadprog Rcpp RcppArmadillo]; }; kdensity = derive2 { name="kdensity"; version="1.0.0"; sha256="0di027xjcd8xllkbygmkmpvp9wchh3haf15vrw7sjck3yvh68k5f"; depends=[assertthat EQL knitr rmarkdown]; }; kdetrees = derive2 { name="kdetrees"; version="0.1.5"; sha256="1plf2yp2vl3r5znp5j92l6hx1kgj0pzs7ffqgvz2nap5nf1c6rdg"; depends=[ape distory ggplot2]; }; kdevine = derive2 { name="kdevine"; version="0.4.1"; sha256="0ci51dn7jhz9swlywiqj3inkk4329argm63lhkyvcbj2kd2rjay1"; depends=[cctools doParallel foreach kdecopula KernSmooth MASS qrng Rcpp VineCopula]; }; + kdtools = derive2 { name="kdtools"; version="0.3.0"; sha256="1q22h5cs5p6nvmxrnq0pdfs8aq2aghash9y387ch0g6cm1n5hzj4"; depends=[BH Rcpp strider]; }; kedd = derive2 { name="kedd"; version="1.0.3"; sha256="17rwz3yia95xccbxwn43wr6c9b3062094yfahnnnk3wfijyhlxiq"; depends=[]; }; keep = derive2 { name="keep"; version="1.0"; sha256="12803hhrs9v94rv6qaihk1f1ls7lx4cy2pa30v4p1r2z9afx9bjf"; depends=[]; }; kehra = derive2 { name="kehra"; version="0.1"; sha256="1cc0bmbg0dncay50ap7cs2516qngzz3ddaab0jk5r6lwfq87h8qx"; depends=[Hmisc raster reshape2 sp stringr xts zoo]; }; kelvin = derive2 { name="kelvin"; version="2.0-0"; sha256="04xdgpmysksm79m3vqmb4zra3pq09nv99w4fbdla1lmy7z8pkdrk"; depends=[Bessel]; }; kequate = derive2 { name="kequate"; version="1.6.1"; sha256="1rjya1rnlfk2ziiwhkgshlyk3g0388591q3q01a3vgmgsb3cpxl6"; depends=[equateIRT ltm mirt]; }; - keras = derive2 { name="keras"; version="2.1.4"; sha256="1z08fi5a0hxw96xj95w9k0d918b1yvqixlv0szqbdrd5dqnfj0xa"; depends=[magrittr R6 reticulate tensorflow tfruns zeallot]; }; + keras = derive2 { name="keras"; version="2.1.5"; sha256="0l6hs9bawrnjansmka082cqvcf4h5lnrfjgp9rivg8k89nqaknfq"; depends=[magrittr R6 reticulate tensorflow tfruns zeallot]; }; kerasR = derive2 { name="kerasR"; version="0.6.1"; sha256="1yi7710vgcwz0jhishbga41sc6qyk83a0avmq01dvqjsz3cdfsfc"; depends=[reticulate]; }; kerasformula = derive2 { name="kerasformula"; version="0.1.1"; sha256="0c19208y9v8a1w4p54z7yng5vvmb6h79fs0a20ij98ngys9afbwz"; depends=[dplyr keras Matrix]; }; kerdiest = derive2 { name="kerdiest"; version="1.2"; sha256="16xj2br520ls8vw5qksxq9hqlpxlwmxccfk5balwgk5n2yhjs6r3"; depends=[chron date evir]; }; @@ -7559,7 +7705,7 @@ in with self; { kernelFactory = derive2 { name="kernelFactory"; version="0.3.0"; sha256="001kw9k3ivd4drd4mwqapkkk3f4jgljiaprhg2630hmll064s89j"; depends=[AUC genalg kernlab randomForest]; }; kernelboot = derive2 { name="kernelboot"; version="0.1.4"; sha256="1d1l9sbnlyx5a88qmd6q2zxlkr6dykcwlkk648yqmmfvqmq4xjmj"; depends=[future future_apply Rcpp]; }; kernlab = derive2 { name="kernlab"; version="0.9-25"; sha256="0qnaq9x3j2xc6jrmmd98wc6hkzch487s4p3a9lnc00xvahkhgpmr"; depends=[]; }; - kernplus = derive2 { name="kernplus"; version="0.1.0"; sha256="0wibp4bbzxmjdyhp643v76accjy1w8jixmwgsdfrq2yjxacgnwcb"; depends=[circular KernSmooth mixtools]; }; + kernplus = derive2 { name="kernplus"; version="0.1.1"; sha256="1dxw1qk5gx7g05kgsbh5436r7mbv77631zjs0c4ibpscaw77g475"; depends=[circular KernSmooth mixtools]; }; kernscr = derive2 { name="kernscr"; version="1.0.3"; sha256="0h3xv76dxch8kv4z7cgx60iaikk6906n75c4kc1mccpw0jvyxrvb"; depends=[MASS mvtnorm]; }; kexpmv = derive2 { name="kexpmv"; version="0.0.3"; sha256="1nx2bpyc06vlr78nhig4zaaygphjp4wqsz9jzhs4qx8wy3kh7rmy"; depends=[Rcpp SparseM]; }; keyholder = derive2 { name="keyholder"; version="0.1.1"; sha256="1dp326vayjzjpfhd2ajrpqjvbn6vvqa7iw9mdhblprz4cvv65g30"; depends=[dplyr rlang]; }; @@ -7582,16 +7728,15 @@ in with self; { kissmig = derive2 { name="kissmig"; version="1.0-3"; sha256="1pi1x3gdbqrhr1km1hqj15k8wyrgs697fnxgjgxga1irbn8bi482"; depends=[raster]; }; kitagawa = derive2 { name="kitagawa"; version="2.1-0"; sha256="1ddyd0rwwmdpbq823qass5dlp2lvi9d64wpl61ik6fghms2p9ryr"; depends=[kelvin]; }; kknn = derive2 { name="kknn"; version="1.3.1"; sha256="1nzkg3dxaiqp87p56wm895qx5xn86hv5hjr73qvl1yiaxiq0x112"; depends=[igraph Matrix]; }; - klaR = derive2 { name="klaR"; version="0.6-12"; sha256="10nkqb1zradbvifgv1fm373mhyydgdjjgmnw2442a2lark59z3vs"; depends=[combinat MASS]; }; + klaR = derive2 { name="klaR"; version="0.6-14"; sha256="1g995df6286sd64nw7q9bihzkqhrasks45n8xk678y57kcadksai"; depends=[combinat MASS questionr]; }; klausuR = derive2 { name="klausuR"; version="0.12-10"; sha256="12fjs4dnwaki8sz718xgsg8qrqhsgf87cs0bylf0p3f5k8hrmk4b"; depends=[polycor psychometric xtable]; }; klin = derive2 { name="klin"; version="2007-02-05"; sha256="0j0hr4bppzk754a66q5z42h7jzfavqpxgl7y266804aginfqm1ax"; depends=[Matrix]; }; km_ci = derive2 { name="km.ci"; version="0.5-2"; sha256="1l6kw8jppaa1802yc5pbfwwgac56nhwc9p076ivylhms4w7cdf8v"; depends=[survival]; }; kmc = derive2 { name="kmc"; version="0.2-2"; sha256="0ldyhlqdrbygvhpy4b9xp52zjvjmb0gaph0v9fhla707f63i21m5"; depends=[emplik Rcpp rootSolve]; }; kmconfband = derive2 { name="kmconfband"; version="0.1"; sha256="10n5w8k57faqcclwshs4m66i2i5b70i6f3xq5nqlgsi2ldkysbc9"; depends=[survival]; }; kmcudaR = derive2 { name="kmcudaR"; version="1.0.0"; sha256="1adixf4nsgnk8rgvcv37aznh8gxrfwn19ihh3c6siss51hlmhln2"; depends=[Rcpp RcppEigen]; }; - kmeans_ddR = derive2 { name="kmeans.ddR"; version="0.1.0"; sha256="1i87cxakjbq1xwyjyyzv1xiqbrncsqx6baviidcdm3n0pakrqdsg"; depends=[ddR Rcpp]; }; kmed = derive2 { name="kmed"; version="0.0.1"; sha256="0vcks4n0dpfd5cl5b8mhvhw6r2f3y12jn3d3j3dkj2grxmb9lh4c"; depends=[ggplot2]; }; - kmer = derive2 { name="kmer"; version="1.0.0"; sha256="0zknmcmv96bq0yqmmbshjwwh7vy2iwks4masmglayx7jw323n9cx"; depends=[openssl phylogram Rcpp]; }; + kmer = derive2 { name="kmer"; version="1.0.2"; sha256="117ggn2i4yy0l7vvrf9miy4x63n9d34rjksd3dd3ama2alp4s95l"; depends=[openssl phylogram Rcpp]; }; kmi = derive2 { name="kmi"; version="0.5.3"; sha256="0b3nibvi0skrx3mjfzypqmdqx8s9zkn11f0ljscqpjr28idx4hr0"; depends=[mitools survival]; }; kml = derive2 { name="kml"; version="2.4.1"; sha256="1my9gcripiqc6iphycjr3srj8qxy05yvd0648vblygrx2qym5hy2"; depends=[clv longitudinalData]; }; kml3d = derive2 { name="kml3d"; version="2.4.2"; sha256="1a3hqyhrsh12l1j1xlz4zy88impw3biz6w2qc80r11m549h0m6s9"; depends=[clv kml longitudinalData misc3d rgl]; }; @@ -7611,12 +7756,15 @@ in with self; { knotR = derive2 { name="knotR"; version="1.0-2"; sha256="0kd1b9wibpwyaanz9ny61qgfvcg4d3rzpy05sfshlpp0b1y8d3xj"; depends=[]; }; kntnr = derive2 { name="kntnr"; version="0.4.1"; sha256="0d78mgmz2yhfbf4m5jaa28aazaw2wf9vf1vxl53wrnpy0hxw329y"; depends=[base64enc dplyr httr jsonlite lazyeval lubridate purrr rstudioapi stringr tibble]; }; koRpus = derive2 { name="koRpus"; version="0.10-2"; sha256="1ykaky10zkj76w44fhk6kb6dqz1pgncmdnz4r2amcm08a8h96gsr"; depends=[data_table]; }; + koRpus_lang_en = derive2 { name="koRpus.lang.en"; version="0.1-2"; sha256="0v3cjzcpa24n479xi2lkj3yhjrgbd14iq9rz1bvywbj3shixs0bn"; depends=[koRpus sylly_en]; }; kofdata = derive2 { name="kofdata"; version="0.1.3"; sha256="135fkfciya8d215iv0ir7kmd01w7rlzqfcif5jz918skrv2p9mcl"; depends=[httr jsonlite xts zoo]; }; kofnGA = derive2 { name="kofnGA"; version="1.2"; sha256="1j4gx6pkmasgbgcdlg6i5nzfrmim61c2hw34k5zfmwfbkrsgb575"; depends=[]; }; kohonen = derive2 { name="kohonen"; version="3.0.4"; sha256="1aq98qbmbzsdyimhn28qiyqfrwkwq70qmm5yhx0rvhjq53bn9622"; depends=[MASS Rcpp]; }; kokudosuuchi = derive2 { name="kokudosuuchi"; version="0.4.2"; sha256="1nwydfyr9waa5h8h8nrmwxy0jx7i4893g5khfv6b4g09z6g5cyly"; depends=[curl dplyr glue httr purrr rlang sf shiny stringr tibble xml2]; }; kolmim = derive2 { name="kolmim"; version="1.0"; sha256="0g1i0cazi4nhfwdd3ywqrar1sn7bw77w38qjii045w5vqg05srkp"; depends=[]; }; komadown = derive2 { name="komadown"; version="0.1.0"; sha256="08rg2qz4dmxl4xi0d7wdl2xgdmsc29fdc0yi40yddzrbpj4vs2z4"; depends=[bookdown knitr rmarkdown]; }; + komaletter = derive2 { name="komaletter"; version="0.2.0"; sha256="17xkc22ci2gqypcfs1yhyzfmpsh8bmjbw6yms27cbqg4m4jdgm9v"; depends=[rmarkdown]; }; + konfound = derive2 { name="konfound"; version="0.1.0"; sha256="1w85gsms061d5hik3bc7x5gc7cp6c9h8l8q8q60isj1r0n60a81s"; depends=[broom dplyr ggplot2 margins pbkrtest purrr rlang tidyr]; }; kpcalg = derive2 { name="kpcalg"; version="1.0.1"; sha256="1gd5bisyfwb12l9jmwhi2arlxrabc01vgv4m1qqs23vybsd6yh52"; depends=[energy graph kernlab mgcv pcalg RSpectra]; }; kpeaks = derive2 { name="kpeaks"; version="0.1.0"; sha256="1qxpncwyshv35h1190py6a69mljabfcjjs7v17a2rb5asahy3rk8"; depends=[]; }; kpmt = derive2 { name="kpmt"; version="0.1.0"; sha256="15d26khc0v3kc1c7l1avqp48pfqmc6xj32029mv7myivr41ashk3"; depends=[matrixStats]; }; @@ -7628,12 +7776,12 @@ in with self; { kscons = derive2 { name="kscons"; version="0.7.0"; sha256="1i4dp56y9swl5s6cipqlm5i5fknz2v0yz5g930cl5i8kx91rxwrp"; depends=[]; }; kselection = derive2 { name="kselection"; version="0.2.0"; sha256="1arg96r2pldvb89rfqnfpjxwksyac2mhmbimbkwzm7wrnbnrcn5d"; depends=[]; }; ksrlive = derive2 { name="ksrlive"; version="1.0"; sha256="1zd3ggzgjks0jay69s5m7ihbd7v7zha6ssj2m9ahnyp00ghpk83j"; depends=[tightClust]; }; - kst = derive2 { name="kst"; version="0.3-1"; sha256="1b4lqjg9j91qhr5gk0y1xsyfbhgaixza7qw6kl05yz88p6m7p35z"; depends=[proxy relations sets]; }; + kst = derive2 { name="kst"; version="0.4-0"; sha256="1vqkriqhzdzs3kldjqgl15sm25lbfqzisglk2r96rjgxbj8k59w7"; depends=[proxy relations sets]; }; kstIO = derive2 { name="kstIO"; version="0.1-0"; sha256="04s8lyg7622zcq947qlx5brwf1an7icg94i5di8vwjp7d8zgczq6"; depends=[MASS pks sets stringr]; }; ktsolve = derive2 { name="ktsolve"; version="1.1"; sha256="0b5myr093v3qaj9gzbw1w728i5ij418whxxpicj51w657dcy647k"; depends=[]; }; ktspair = derive2 { name="ktspair"; version="1.0"; sha256="1v63982jidxlcf2syahcb29myv34kc790l7lwyfxx9l50ssb812n"; depends=[Biobase]; }; kulife = derive2 { name="kulife"; version="0.1-14"; sha256="070ayy6fr9nsncjjljikn2i5sp2cx3xjjqyc64y2992yx74jgvvd"; depends=[]; }; - kutils = derive2 { name="kutils"; version="1.34"; sha256="17f6pzinmp4lcjd5glhnvbjy1yg912jccx9d4n55bini93vlcz0z"; depends=[foreign lavaan openxlsx plyr RUnit xtable]; }; + kutils = derive2 { name="kutils"; version="1.39"; sha256="05744f8bz8mbxcqhf50rxjlknwar4ci3g0nmcx5jggwczqqmn2pq"; depends=[foreign lavaan openxlsx plyr RUnit xtable]; }; kvh = derive2 { name="kvh"; version="1.1"; sha256="1dvq7wbpx1hpjshvsihivd8q8hyhji047gifxc6cjnv778r4irb1"; depends=[Rcpp]; }; kwb_hantush = derive2 { name="kwb.hantush"; version="0.2.1"; sha256="0rjnhhzvjhhl0r2ixz9vkgnqkrnnk772253zy7xkpadj7ws69jsf"; depends=[hydroGOF lattice]; }; kyotil = derive2 { name="kyotil"; version="2017.12-27"; sha256="0xd64xg3nj0pj0ziycq4ndpl8kwxfng96ag8zmqzzxk85zw2vyq3"; depends=[]; }; @@ -7652,7 +7800,7 @@ in with self; { labeling = derive2 { name="labeling"; version="0.3"; sha256="13sk7zrrrzry6ky1bp8mmnzcl9jhvkig8j4id9nny7z993mnk00d"; depends=[]; }; labelled = derive2 { name="labelled"; version="1.0.1"; sha256="18mz4qraxalq50rzmblsvavx4isb4194rj4iqab09qzh8ib1qzwv"; depends=[haven]; }; labelrank = derive2 { name="labelrank"; version="0.1"; sha256="03pmpkjdhgw80473kdzdz4s4828pa8f5bja2zqicxrhvyvicvz6f"; depends=[pdist]; }; - labstatR = derive2 { name="labstatR"; version="1.0.8"; sha256="1qs76vhw6ihsriq5v0s980fxbb0pbvgwqm0a97b226cpqqabkpfm"; depends=[]; }; + labstatR = derive2 { name="labstatR"; version="1.0.9"; sha256="1ysk23dwan1lsfwnf9v86yqyzc8wsgzmy18ycz34s4d9biq6y1zd"; depends=[]; }; labstats = derive2 { name="labstats"; version="1.0.1"; sha256="1780slp9l1rqwr5ika6hv606jzbaa3g1ywzkjkd3ff2gb0cby3ni"; depends=[]; }; laeken = derive2 { name="laeken"; version="0.4.6"; sha256="1rhkv1kk508pwln1d325iq4fink2ncssps0ypxi52j9d7wk78la6"; depends=[boot MASS]; }; laercio = derive2 { name="laercio"; version="1.0-1"; sha256="0la6fxv5k9zq4pyn8dxjiayx3vs9ksm9c6qg4mnyr9vs12z53imm"; depends=[]; }; @@ -7668,6 +7816,8 @@ in with self; { landsat = derive2 { name="landsat"; version="1.0.8"; sha256="07zvj1yyryxk7rwgcrf1kl32p2karkkqz6xrnwy1096dg9iw2js7"; depends=[lmodel2 mgcv rgdal sp]; }; landsat8 = derive2 { name="landsat8"; version="0.1-10"; sha256="169b5ka98ka9chbmksz6syaygc9wgl8i2gz1h2xkxj3lk9jcg01r"; depends=[rgdal sp]; }; landscapeR = derive2 { name="landscapeR"; version="1.2"; sha256="1zm5mj861ycbc2m28yjqnkifx8grc4l718mf8r422m78jfakvcjy"; depends=[raster Rcpp]; }; + landscapetools = derive2 { name="landscapetools"; version="0.3.0"; sha256="0ssrqcac3x8fca0vx63nzzac38kx8vlbffkzahmag24c6b1y6dzq"; depends=[checkmate dplyr extrafont ggplot2 magrittr purrr raster rasterVis tibble tidyr viridis]; }; + landsepi = derive2 { name="landsepi"; version="0.0.4"; sha256="0b162vdgrd1v93bm5dc5r4nzpcm3cq5iy8v3f2axpx1fk378aaar"; depends=[fields maptools MASS Matrix Rcpp rgdal rgeos sf sp splancs]; }; languageR = derive2 { name="languageR"; version="1.4.1"; sha256="0grkhdjz9dcrgq6qwv7wpwmckn3mfv022c5wrx29b1dxafd0qzm0"; depends=[]; }; languagelayeR = derive2 { name="languagelayeR"; version="1.2.3"; sha256="1sh3k8xw88pm93wmpy1qi44i8pv5b5g6ajzas36bdi1bqm8cqzax"; depends=[attempt curl httr rjson]; }; languageserver = derive2 { name="languageserver"; version="0.1.0"; sha256="05ph152xrw8qmnb1mwqsq2qx11d6f4g57v9qp1mxi6y11wl21rxq"; depends=[callr jsonlite lintr R6 repr stringr]; }; @@ -7680,7 +7830,6 @@ in with self; { lassopv = derive2 { name="lassopv"; version="0.2.0"; sha256="0yawnjw063jypk3riy9xab9cmliv6c9dnabi18670khd3gzb2r9z"; depends=[lars]; }; lassoscore = derive2 { name="lassoscore"; version="0.6"; sha256="1i3i07da8sw9w47rcflhylz8zxvzkyycbc1a4gf6hbcpp21rqd7d"; depends=[glasso glmnet Matrix]; }; lassoshooting = derive2 { name="lassoshooting"; version="0.1.5-1"; sha256="0ixjw8akplcfbzwyry9p4bhbcm128yghz2bjf9yr8np6qrn5ym22"; depends=[]; }; - lasvmR = derive2 { name="lasvmR"; version="0.1.2"; sha256="1yzyfacr47wkpv9bblm7hvx1hgnzbhy1421bpnh95xfxxlzahy5n"; depends=[checkmate Rcpp]; }; latdiag = derive2 { name="latdiag"; version="0.2-3"; sha256="0i2mqk3ldg5kf4d8sfljgjsqbdin7v69anmc2rrxgy28bmvykf9d"; depends=[]; }; latentnet = derive2 { name="latentnet"; version="2.8.0"; sha256="05r7hzj5i7rgpxl798lwi2m62l1qkl5zdza0q2awcd5ydkgj34hp"; depends=[abind coda ergm MASS mvtnorm network sna statnet_common]; }; later = derive2 { name="later"; version="0.7.1"; sha256="0z9jymmclkq9zcg1fd8p6gsnm5z1sn3n9pfz3bs03qjrkbizgrvz"; depends=[BH Rcpp rlang]; }; @@ -7689,9 +7838,9 @@ in with self; { lattice = derive2 { name="lattice"; version="0.20-35"; sha256="0pcnmaz3lr62ly0dcy5hnnqxshc4yqd43hrvlz3almgc9l7sna88"; depends=[]; }; latticeDensity = derive2 { name="latticeDensity"; version="1.0.7"; sha256="1y33p8hfmpzn8zl4a6zxg1q3zx912nhqlilca6kl5q156zi0sv3d"; depends=[spam spatstat spdep splancs]; }; latticeExtra = derive2 { name="latticeExtra"; version="0.6-28"; sha256="1hkyqsa7klk5glj9y1hg3rxr5qilqw8h0017zc4c3nps7lr9a1kq"; depends=[lattice RColorBrewer]; }; - lava = derive2 { name="lava"; version="1.6"; sha256="02xf5d968raz9gnq5ywy04wz29xpdyca1hm79vbbg1mcxvzdl1dz"; depends=[numDeriv SQUAREM survival]; }; + lava = derive2 { name="lava"; version="1.6.1"; sha256="11k9npmzp3nk2qx0h1dwwfc37j4ddd9y54bppxby0ffnb8qlpw1k"; depends=[numDeriv SQUAREM survival]; }; lava_tobit = derive2 { name="lava.tobit"; version="0.5"; sha256="15dlcjgnvrpdxymcwf4rvk72ssr650dy1ayp50zlrp2va0p6h4kw"; depends=[lava mets mvtnorm survival]; }; - lavaSearch2 = derive2 { name="lavaSearch2"; version="1.1.0"; sha256="1nmzj4yfgas6a9wss34ckd55gajxmd9a0fk8lmpxc2130hlr4ld8"; depends=[ggplot2 lava MASS Matrix multcomp mvtnorm nlme reshape2 sandwich]; }; + lavaSearch2 = derive2 { name="lavaSearch2"; version="1.3.3"; sha256="08h9nfbjbq6l5drmq07js2b6ylv29wfrddqdlpsnysi99sj8i8aq"; depends=[ggplot2 lava MASS Matrix multcomp mvtnorm nlme reshape2 sandwich]; }; lavaan = derive2 { name="lavaan"; version="0.5-23.1097"; sha256="11wxzjg09q5wzvbp1lhi9sjnp4rrjpdxnmq3zf8npx08iwkw79ws"; depends=[MASS mnormt numDeriv pbivnorm quadprog]; }; lavaan_shiny = derive2 { name="lavaan.shiny"; version="1.2"; sha256="0qgswdpxb5af0l3v70sg0jrgsdwr88gz6zzwbk3pw5x6qnvnwb6r"; depends=[lavaan psych semPlot shiny shinyAce]; }; lavaan_survey = derive2 { name="lavaan.survey"; version="1.1.3.1"; sha256="133hpy8s00y6jzwwzl9brdh70w26jycdm3n1c6bcryghwh3ai4xr"; depends=[lavaan MASS survey]; }; @@ -7714,7 +7863,7 @@ in with self; { lcmm = derive2 { name="lcmm"; version="1.7.8"; sha256="180xfx842sic5qnfr0zh2h4345zkzlf123pdw4q6gd0mi5smwwc7"; depends=[survival]; }; lcopula = derive2 { name="lcopula"; version="1.0"; sha256="07a9k5fp03s6jnjawg11j4458xrsrrqxv6kf3cs58ymv0j2s1qyd"; depends=[copula pcaPP Rcpp]; }; lctools = derive2 { name="lctools"; version="0.2-6"; sha256="06hhz0sjdrci1li03f09wij1qrl74sla2938fbkx72ffy0mdg310"; depends=[MASS pscl reshape weights]; }; - lcyanalysis = derive2 { name="lcyanalysis"; version="1.0.0"; sha256="0m8wfp8vs4pgzmxinlbxask1i0z6mf35cyyib77mbyqlfvf0hic0"; depends=[quantmod TTR xts zoo]; }; + lcyanalysis = derive2 { name="lcyanalysis"; version="1.0.3"; sha256="0nkqrm8r5iyvw2gbixvi0bnqx2wafg67cqz9mn99halzk9hpynl9"; depends=[quantmod TTR xts zoo]; }; lda = derive2 { name="lda"; version="1.4.2"; sha256="03r4h5kgr8mfy44p66mfj5bp4k00g8zh4a1mhn46jw14pkhs21jn"; depends=[]; }; ldamatch = derive2 { name="ldamatch"; version="1.0.1"; sha256="1dmmjw7h0rrgwga7235bryzzvmx68gmkpy5v1pwvnkk4rxp8xamh"; depends=[car data_table entropy foreach gmp iterators iterpc kSamples MASS RUnit]; }; ldat = derive2 { name="ldat"; version="0.1.0"; sha256="1ga96m1sl7khhwi41ab07k02ay4w8vzi5cl895h9kfavgbhqsf6m"; depends=[BH lvec]; }; @@ -7737,7 +7886,7 @@ in with self; { leapp = derive2 { name="leapp"; version="1.2"; sha256="1yiqzmhgl5f3zwpcc5sz3yqrvp8p6r4w2ffdfyirirayqc96ar17"; depends=[corpcor MASS sva]; }; leaps = derive2 { name="leaps"; version="3.0"; sha256="11gjmn1azrjw5xlvdb4gknj9985kck9x8zb9np1rnk2smp6pka2m"; depends=[]; }; learNN = derive2 { name="learNN"; version="0.2.0"; sha256="0q0j25vi7hrwaf38y10m24czf3rsvj937jvkz3ns12bd8srlflah"; depends=[]; }; - learningCurve = derive2 { name="learningCurve"; version="1.1.1"; sha256="1rvh6i3vmwrff491k9w551402m3i9sra8rzkljgk9b5fmw7hk5ki"; depends=[ggplot2 gridExtra scales tidyverse]; }; + learningCurve = derive2 { name="learningCurve"; version="1.1.2"; sha256="02dl5rlvwa8dvhknf4kdfg3aial54shnxrq7k2k8yj2dj0qh062c"; depends=[ggplot2 gridExtra scales tibble]; }; learningr = derive2 { name="learningr"; version="0.29"; sha256="1nr4ydcq2mskv4c0pmf0kxv5wm8pvjqmv19xz5yaq0j834b0n5q7"; depends=[plyr]; }; learnr = derive2 { name="learnr"; version="0.9.2"; sha256="1z04c1djg7ghsl7p9ypc6k5m7snahnmjy10xmrzqfayx1wkfkn9n"; depends=[evaluate htmltools htmlwidgets jsonlite knitr markdown rappdirs rmarkdown rprojroot shiny withr]; }; learnrbook = derive2 { name="learnrbook"; version="0.0.2"; sha256="1k17dk8ahn1ifwid1hhx0k7fpgc62zg82y66bbf6nhd4dgdbbv2p"; depends=[]; }; @@ -7746,17 +7895,17 @@ in with self; { leiv = derive2 { name="leiv"; version="2.0-7"; sha256="15ay50886xx9k298npyksfpva8pck7fhqa40h9n3d7fzvqm5h1jp"; depends=[]; }; lemon = derive2 { name="lemon"; version="0.3.3"; sha256="0jxcyplr69a3rganqc02ry57xj7is7dylsh9kvsy6kwnji6bvdib"; depends=[ggplot2 gridExtra gtable knitr lattice]; }; lero_lero = derive2 { name="lero.lero"; version="0.1"; sha256="1jndsgy48fn085ilkh8dfc3w76kfnfj0x70d1m3h59zxi3x9lb82"; depends=[stringr]; }; - lessR = derive2 { name="lessR"; version="3.7.0"; sha256="14zzm7dsjwl94bcnzrkf8bk83nxsini11s5l0pia31xnm6yl89ln"; depends=[colorspace ellipse foreign lattice latticeExtra leaps png readxl robustbase sas7bdat triangle]; }; + lessR = derive2 { name="lessR"; version="3.7.2"; sha256="0rmfrwp6hznivj8809n21ihriq33264yj82l3ii7kil1i3vmac3n"; depends=[ellipse foreign lattice latticeExtra leaps openxlsx png robustbase sas7bdat triangle]; }; lestat = derive2 { name="lestat"; version="1.8"; sha256="12w3s5yr9lsnjkr3nsay5sm4p241y4xz0s3ir56kxjqw23g6m80v"; depends=[MASS]; }; letsR = derive2 { name="letsR"; version="3.1"; sha256="0wyqqq7w21k87md3pwsz3kdaws345fdhh2xgavwiiywalg0gvxxx"; depends=[fields geosphere maps maptools raster rgdal rgeos sp XML]; }; lettercase = derive2 { name="lettercase"; version="0.13.1"; sha256="0s2s42v6a3mlz6084sk5wcbap3czgbd53f9p64pxwd1yfj18lbyx"; depends=[stringr]; }; lexRankr = derive2 { name="lexRankr"; version="0.5.0"; sha256="1l0p4qg6lcpp1f2n6mh1glvxzy3bis0c1ra8x9z5v26x31wmwq68"; depends=[igraph Rcpp SnowballC]; }; lexicon = derive2 { name="lexicon"; version="0.7.4"; sha256="1f2n90xdpbxk6ffzzlib7fxxswwkfrpf404vzx85s016529dy42m"; depends=[data_table syuzhet]; }; lexiconPT = derive2 { name="lexiconPT"; version="0.1.0"; sha256="0w53gnr29nzc1ib54rnxdycs0c5f7vpv586qmvxxzy4ar16kisaq"; depends=[]; }; - lfactors = derive2 { name="lfactors"; version="1.0.1"; sha256="13vjafbss0860fi4qcf23g3cjs9dlr2k5f3majbnyvhwsbfs7cla"; depends=[]; }; + lfactors = derive2 { name="lfactors"; version="1.0.4"; sha256="1r8qlwj3zsm233jfx9ag0q5g1knvjmbwl3785pwcd12zi6f68dcc"; depends=[]; }; lfda = derive2 { name="lfda"; version="1.1.2"; sha256="0y59iigcpmyrmsiwrpv5agja6vz3wxmxd9sl5hbf1ybm4d0lyky4"; depends=[plyr rARPACK]; }; lfe = derive2 { name="lfe"; version="2.6-2291"; sha256="1hdzq85y1nxrinikf308mvdmyw883bfzbamr27ffdphlk403ry70"; depends=[Formula Matrix sandwich xtable]; }; - lfl = derive2 { name="lfl"; version="1.4"; sha256="09ni0n7xqn3qw9jjh24j679cyzgf0cxxw535ap4z44jjk29bqngw"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; }; + lfl = derive2 { name="lfl"; version="1.4.1"; sha256="0r9459mmnx1khpw24w943y1x4xl3zcws2cvv61216yzb0xbqwhc0"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; }; lfstat = derive2 { name="lfstat"; version="0.9.4"; sha256="0lm9fyw45kdkkjldkmagykn9p3l3jlw2ky3h00f7j6rqkizjm6r0"; depends=[dygraphs lattice latticeExtra lmom lmomRFA plyr xts zoo]; }; lg = derive2 { name="lg"; version="0.1.0"; sha256="0gaid5aihc9dk3igbm8jhsspl1k4k3prqvn7j2vsm92jc7m00iyw"; depends=[ggplot2 ks localgauss logspline mvtnorm]; }; lga = derive2 { name="lga"; version="1.1-1"; sha256="1nkvar9lmdvsc3c21xmrnpn0haqk03jwvc9zfxvk5nwi4m9457lg"; depends=[boot lattice]; }; @@ -7770,7 +7919,7 @@ in with self; { librarysnapshot = derive2 { name="librarysnapshot"; version="0.1.2"; sha256="0v4x564zpm58kxs5n84bi6mcjhbzjg6a2lc30vsc8kbm3qy0nq38"; depends=[]; }; libsoc = derive2 { name="libsoc"; version="0.6.4"; sha256="1hdnqgnvzm5116gphxa55k2bc3ksr607px2s2yg1ilmmxdghdccw"; depends=[]; }; libstableR = derive2 { name="libstableR"; version="1.0"; sha256="0qk70rl76lz2izgp2c1asx0yvi8xgfq1yg579kcygxk4pnxjdwv4"; depends=[Rcpp]; }; - lidR = derive2 { name="lidR"; version="1.4.1"; sha256="01nw6i7ddk99zayblqhxsnx2cy29ippii9vdqahffv91644iqqb1"; depends=[data_table future gdalUtils geometry gstat lazyeval magrittr mapedit mapview memoise RANN raster Rcpp RcppProgress rgeos rgl rlas settings sp stringr]; }; + lidR = derive2 { name="lidR"; version="1.4.2"; sha256="1m37ncyj2z9yh40qzl4h3s4dpizmfqz8n0fcybpjjhi8yr3lipdf"; depends=[data_table future gdalUtils geometry gstat lazyeval magrittr mapedit mapview memoise RANN raster Rcpp RcppProgress rgeos rgl rlas settings sp stringr]; }; lifecontingencies = derive2 { name="lifecontingencies"; version="1.3.2"; sha256="012pfiz4l8xrwrjlzwfc0vxw1wpw2n2f2vj39mlpmg5aswg4mm8k"; depends=[markovchain Rcpp]; }; lifecourse = derive2 { name="lifecourse"; version="2.0"; sha256="1m8ihqvzhzpq2m2pdvh37bpq9pdbj23r3y0jkl3q8farh3qj473d"; depends=[TraMineR]; }; lifelogr = derive2 { name="lifelogr"; version="0.1.0"; sha256="1wygvw61ygpww0kahxhmjdncwg4zc2cshs0brzw18nfqaj8vpfav"; depends=[dplyr fitbitScraper ggplot2 lazyeval lubridate modelr plyr R6 shiny stringr tibble tidyr]; }; @@ -7793,7 +7942,7 @@ in with self; { linear_tools = derive2 { name="linear.tools"; version="1.3.0"; sha256="14lp3gifzbid82lkr7rdqajz2abp8m7y8irpwx6s8w66djjfckda"; depends=[ggplot2 magrittr plyr pryr scales stringr]; }; linearQ = derive2 { name="linearQ"; version="1.0"; sha256="0c6ccllv4zf8zgs3957zjvnkdwbv2ryrs0f5lzk1clc233vm7acm"; depends=[Rcpp stepR]; }; linemap = derive2 { name="linemap"; version="0.1.0"; sha256="0qkbmpfr742xbs3xn5ppx6q0prwrr9mk1c1mv050cm47dm7jcs6l"; depends=[sf]; }; - lineup = derive2 { name="lineup"; version="0.37-6"; sha256="1xyvw00lwnx7j3cgk4aw69lam6ndjxx3wj14h4jpx1xn8l3w7652"; depends=[class qtl]; }; + lineup = derive2 { name="lineup"; version="0.37-10"; sha256="1w45ll6phynn03ala0wadmp06rrgg8rcqnhz7hqy4w6q7khbkk6r"; depends=[class qtl]; }; lingtypology = derive2 { name="lingtypology"; version="1.0.12"; sha256="03rjnr4hy7im88pawrd86nas0fzkgz3mnzdc8rclcfbbv1vyzxf5"; depends=[leaflet leaflet_minicharts magrittr MASS rowr sp stringdist]; }; link2GI = derive2 { name="link2GI"; version="0.3-0"; sha256="0jzk1p9cygcw0xz9hqfzx74acl4ymn3jmcjj0dxrmknsvfdzcl2d"; depends=[gdalUtils raster rgdal rgrass7 RSAGA sf sp]; }; linkR = derive2 { name="linkR"; version="1.1.1"; sha256="1748r7s5g0gvsmghrb7l5lmdbzb9f4vkbgj51v308jr64r1k7l93"; depends=[svgViewR]; }; @@ -7814,10 +7963,11 @@ in with self; { listdtr = derive2 { name="listdtr"; version="1.0"; sha256="08drps03nndpdxswyv8bjm1bcckjav5pjj7fdx3dzyn0v4dfy619"; depends=[ggplot2]; }; listenv = derive2 { name="listenv"; version="0.7.0"; sha256="0ma5jsri2zqkrlsm9nqpikl7imbwfy1glsmk13mblw0q245h49k1"; depends=[]; }; listless = derive2 { name="listless"; version="0.0-2"; sha256="1gr6l4vih7j28kg2mj1xj2yhlpwjc4p894vsxri25vq0r9kgcdym"; depends=[magrittr tidyr]; }; - listviewer = derive2 { name="listviewer"; version="1.4.0"; sha256="1273vk8pk393ciwahvpmdh9z4xdlhw3a7mlm7jsqxqnsrc6jrz3x"; depends=[htmltools htmlwidgets shiny]; }; + listviewer = derive2 { name="listviewer"; version="2.0.0"; sha256="0fq9jdb9yahm095m5ja9j7hlv3ggigj14nlf1pdk26xj2685j8n9"; depends=[htmltools htmlwidgets shiny]; }; liteq = derive2 { name="liteq"; version="1.0.1"; sha256="080ljgb2qsfmyppnlp9acmskgq94pmdbbgbhygqkxvzda5bbas8h"; depends=[assertthat DBI rappdirs RSQLite]; }; littler = derive2 { name="littler"; version="0.3.3"; sha256="1cbsnm4ffzld93b9q8g6g6h6yskjfwa8j1xani5682ipb7r290x7"; depends=[]; }; - liureg = derive2 { name="liureg"; version="1.1.1"; sha256="11cybb1i3a0na3yadzwmn1hlglqk0zdzxj0n07ygsxrdq7sxbpnj"; depends=[]; }; + liureg = derive2 { name="liureg"; version="1.1.2"; sha256="1zhc5fs47whjvvwwiivykxfchzbjbldyvdmqh9rp7ccwba2q3956"; depends=[]; }; + live = derive2 { name="live"; version="1.4.2"; sha256="0f04glaji3yy16mlwmizr4c7ykngqnfk7j2zx8smfn2n6biv6qg3"; depends=[breakDown data_table dplyr forestmodel ggplot2 lubridate mlr]; }; livechatR = derive2 { name="livechatR"; version="0.1.0"; sha256="1k0z6q3s9iw962m1lwlx45p95flzl5jg1xh6ng426v9jh1yyrbb2"; depends=[data_table dplyr jsonlite magrittr purrr]; }; ljr = derive2 { name="ljr"; version="1.4-0"; sha256="0jby94ml8w6pwnxbmv6qfjww2myvvnn9vrmlqpdh71dhgp3z35py"; depends=[]; }; llama = derive2 { name="llama"; version="0.9.1"; sha256="1cvm58kivjw77a2fy1jwsajzl1d0i3i123p6glpwdlqn6rlharck"; depends=[BBmisc checkmate ggplot2 mlr parallelMap plyr rJava]; }; @@ -7827,8 +7977,10 @@ in with self; { lm_beta = derive2 { name="lm.beta"; version="1.5-1"; sha256="0p224y9pm72brbcq8y1agkcwc82j7clsnszqzl1qsc0gw0bx9id3"; depends=[]; }; lm_br = derive2 { name="lm.br"; version="2.9.3"; sha256="1xadz0rygm58igk0ig0w45132gnsvjxvwqzca4m6v6i6lz9x55pf"; depends=[Rcpp]; }; lmPerm = derive2 { name="lmPerm"; version="2.1.0"; sha256="1ss2hcfxqvfq4n6hypv7jp0n0apby9payxzaswaysr5368lkidn3"; depends=[]; }; - lmSupport = derive2 { name="lmSupport"; version="2.9.11"; sha256="1yvckfahw3kq0r28ggrml7qhgm4ib5ihd971zxg62li4inrkri6b"; depends=[AICcmodavg car gplots gvlma lme4 pbkrtest psych pwr]; }; - lme4 = derive2 { name="lme4"; version="1.1-15"; sha256="0sc6rvhiizxxpkdc3wps200wg3pqc0d89crn29lzm75fk8qdd7vx"; depends=[lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen]; }; + lmQCM = derive2 { name="lmQCM"; version="0.1.0"; sha256="0y02pbvl5qbfwnhyzilbcpswwmmq0x47ggpg7pcnhd3dv4b6w6zm"; depends=[Biobase genefilter nnet]; }; + lmSubsets = derive2 { name="lmSubsets"; version="0.1"; sha256="0lkccpk2rxv7dlm4jlk9y3cl3s4cdlfi6schvndrk69glcx0v0zd"; depends=[]; }; + lmSupport = derive2 { name="lmSupport"; version="2.9.13"; sha256="0ln5c91mbxkymgnv2nw5m3nrm5bwckpikgb9x1qhmjc55m98wkb8"; depends=[AICcmodavg car gplots gvlma lme4 pbkrtest psych pwr]; }; + lme4 = derive2 { name="lme4"; version="1.1-17"; sha256="0czwdy1s8h3slaw73pz0h8qmqczf5135fz6i46i2dv1ql2pbq49x"; depends=[lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen]; }; lmeNB = derive2 { name="lmeNB"; version="1.3"; sha256="03khn9wgjbz34sx0p5b9wd3mhbknw8qyvyd5pvllmjipnir63d3q"; depends=[lmeNBBayes numDeriv statmod]; }; lmeNBBayes = derive2 { name="lmeNBBayes"; version="1.3.1"; sha256="13shfsh9x6151xy8gicb25sind90imrwclnmfj96b76p5dvhzabm"; depends=[]; }; lmeSplines = derive2 { name="lmeSplines"; version="1.1-10"; sha256="0fy6hspk7rqqkzv0czvvs8r4ishvs7zsf4ykvia65nj26w7yhyia"; depends=[nlme]; }; @@ -7836,7 +7988,7 @@ in with self; { lmem_gwaser = derive2 { name="lmem.gwaser"; version="0.1.0"; sha256="0i315plqq1c8d7nvzk7jj9b3n4pgy27673pgdbii4c5bccwm12vn"; depends=[fdrtool genetics lattice LDheatmap lme4 pastecs qtl stringr]; }; lmem_qtler = derive2 { name="lmem.qtler"; version="0.1.1"; sha256="0qbllj66y294n1m8dsyrnwyvzscbzg8mb2dmjyghcrfaz925vkin"; depends=[lattice lme4 pastecs qtl stringr]; }; lmenssp = derive2 { name="lmenssp"; version="1.2"; sha256="1vc90x3y1vzmzblc15kqar3nd3c3p8p9nvmpk0ib52n0qv5pr6wz"; depends=[geoR MASS mvtnorm nlme]; }; - lmerTest = derive2 { name="lmerTest"; version="2.0-36"; sha256="1ja56y45fdxa5xqwzng4rk3vjcfjvmchfcpdy08lv9dzkp71g1qp"; depends=[ggplot2 Hmisc lme4 MASS Matrix plyr]; }; + lmerTest = derive2 { name="lmerTest"; version="3.0-0"; sha256="08n6zdyxjbch8vf4gbp339yirf3ixxdhhai8iafxf3f1q2gcr52v"; depends=[ggplot2 lme4 MASS numDeriv]; }; lmeresampler = derive2 { name="lmeresampler"; version="0.1.0"; sha256="00v3qg5vyjjb0pcbrknzxy80kkwsypkhwkv3nsck5rscaf86y3aq"; depends=[boot dplyr Matrix nlmeU plyr RLRsim]; }; lmf = derive2 { name="lmf"; version="1.2"; sha256="1xqlqmjl7wf5b2s2a1k1ara21v74b3wvwl4mhbj9dkdb0jcrgfva"; depends=[]; }; lmfor = derive2 { name="lmfor"; version="1.2"; sha256="1lad1sfrf6lsksix4nn2c2dc5fx0rfm4kdhvbmqf9dc55f98rla8"; depends=[MASS nlme]; }; @@ -7852,7 +8004,7 @@ in with self; { lmomRFA = derive2 { name="lmomRFA"; version="3.1"; sha256="1gq5sjdywz1jbsshrh350zad7iifml2yj8an5xa63ghxiskrxscx"; depends=[lmom]; }; lmomco = derive2 { name="lmomco"; version="2.3.1"; sha256="0nyl18kipsab4ka5ywbmw28kkr6i09w4lc9pa96m1fh765zghjxi"; depends=[goftest Lmoments MASS]; }; lmridge = derive2 { name="lmridge"; version="1.1"; sha256="1r4g7482iz4b7jk0gj169bj96ip2wyrff1ndkwhf0qzg6r6vqa8d"; depends=[]; }; - lmtest = derive2 { name="lmtest"; version="0.9-35"; sha256="107br1l7p52wxvazs031f4h5ryply97qywg9dzrkw4ydnvqq4j9g"; depends=[zoo]; }; + lmtest = derive2 { name="lmtest"; version="0.9-36"; sha256="0sym9sm1vl6bbgq01jhz1plxqmgh8hrgrn7rw0mwvsalcn6id7xy"; depends=[zoo]; }; lmvar = derive2 { name="lmvar"; version="1.4.0"; sha256="0pwpsdmqjlj79ybx5rw82qgkjzak941d9vvdzwipjh8n51mcvwcd"; depends=[Matrix matrixcalc maxLik]; }; loa = derive2 { name="loa"; version="0.2.43.3"; sha256="0krrv5sicm4xvgilri8nwby6jlidx375b4sk273hxq7bhayw4hqq"; depends=[lattice MASS mgcv plyr png RColorBrewer RgoogleMaps]; }; localgauss = derive2 { name="localgauss"; version="0.40"; sha256="0y0pcg2i7lr4wipxawn06hy0q11znhcn2ah6rqwnlyy8pab70pyq"; depends=[foreach MASS matrixStats]; }; @@ -7872,7 +8024,8 @@ in with self; { logcondens_mode = derive2 { name="logcondens.mode"; version="1.0.1"; sha256="1i2c2prk5j863p3a3q3xnsv684igfi5czz3dib7zfjldpf0qyaq7"; depends=[distr logcondens]; }; logcondiscr = derive2 { name="logcondiscr"; version="1.0.6"; sha256="08wwxsrpflwbzgs6vb3r0f52hscxz1f4q0xabr1yqns06gir1kxd"; depends=[cobs Matrix mvtnorm]; }; logging = derive2 { name="logging"; version="0.7-103"; sha256="1sp7q217awizb6l8c9p5dix6skpq8j7w8i088x4mm0fc0qr1ba5c"; depends=[]; }; - loggit = derive2 { name="loggit"; version="1.0.0"; sha256="1h2m4a55v54nvgh665rzhxhzjqkky6lx0f8f43zqh7l152z7bsh2"; depends=[dplyr jsonlite]; }; + loggit = derive2 { name="loggit"; version="1.1.1"; sha256="1w9a3mbf863dk6lnd95mwr15rxjpv1rra1z45jnqk8w56g1s7q4d"; depends=[dplyr jsonlite]; }; + loggle = derive2 { name="loggle"; version="1.0"; sha256="0r1r8m2ckva17vbvwkzhq1lx6bap0kbfj9hxyk46adslcf3xxrxp"; depends=[doParallel foreach glasso igraph Matrix sm]; }; logiBin = derive2 { name="logiBin"; version="0.1.0"; sha256="146jh5cpydpvv8g3ccrglm88zp8sam4airw521cxcfyg5v8qvdqs"; depends=[data_table doParallel foreach iterators partykit]; }; logihist = derive2 { name="logihist"; version="1.0"; sha256="1q3322rh3g31c5i80aw54pln0m1jgxmbx30cn31nlh3ijkvnpq9a"; depends=[ggplot2]; }; logistf = derive2 { name="logistf"; version="1.22"; sha256="0npwqbl8rfvn6w2y0qpkckj44mvjjccj0cn9axp2wcs03cmz0rp8"; depends=[mgcv mice]; }; @@ -7884,18 +8037,18 @@ in with self; { logmult = derive2 { name="logmult"; version="0.6.5"; sha256="0ak13nfgaima6g75rxbghl7xmagfp4qshj09x1fxh2r2rcags7dk"; depends=[gnm qvcalc]; }; logspline = derive2 { name="logspline"; version="2.1.9"; sha256="1kd7ricaxbcjl6d9hx7bb5mlkr7x2h7gc8vrmfvlzxppbcghb6vw"; depends=[]; }; lokern = derive2 { name="lokern"; version="1.1-8"; sha256="1dlyvgd2i4dckd8ic3x75r4sikwalch9b2f13xp5rhkzmfzbprxq"; depends=[sfsmisc]; }; - lolR = derive2 { name="lolR"; version="1.0.1"; sha256="1lhhasbbpacqpc3d7bvw7q183czdjqc6xdlc7yafk7rnwgmpxjxz"; depends=[abind ggplot2 irlba MASS]; }; + lolR = derive2 { name="lolR"; version="2.0"; sha256="0ygxm5qym1s64pa8a04jf44y786svrkhscda2x781jx8gpil753v"; depends=[abind ggplot2 irlba MASS pls]; }; lomb = derive2 { name="lomb"; version="1.0"; sha256="06lbk7s1ilqx6xsgj628wzdwmnvbs0p03hdpx8665fhddcxh3ryy"; depends=[]; }; longCatEDA = derive2 { name="longCatEDA"; version="0.31"; sha256="0dji41lsknfwmgb2fczzm37dm97wvi45rh878w7pwlzwdh9vq8va"; depends=[]; }; longROC = derive2 { name="longROC"; version="1.0"; sha256="1fs11vqi4hy99d7shzzdvd6ic5gay6rh2027w6j0qpd04n8q88m8"; depends=[survival]; }; longRPart2 = derive2 { name="longRPart2"; version="0.2.3"; sha256="1vqcsxi6c4hqrpk3ns7yhghfryin1psxl38qkz2xz8cvyn58f685"; depends=[formula_tools ggplot2 MASS nlme rpart]; }; - longclust = derive2 { name="longclust"; version="1.2"; sha256="1m270fyvfz0w19p9xdv7ihy19nhrhjq2akymbp774073crznmmw0"; depends=[]; }; + longclust = derive2 { name="longclust"; version="1.2.2"; sha256="1yxxz8apbl1vaqzrsiq7r5ss87j2li595bkvibpkwslgwzv47dcs"; depends=[]; }; longitudinal = derive2 { name="longitudinal"; version="1.1.12"; sha256="1d83ws28nxi3kw5lgd5n5y7865djq7ky72fw3ddi1fkkhg1r9y6l"; depends=[corpcor]; }; longitudinalData = derive2 { name="longitudinalData"; version="2.4.1"; sha256="0lnvcfgj721bawl1ciz0jw83mfsnzkhg6jn824vr3qdm4rbib2vd"; depends=[class clv misc3d rgl]; }; longmemo = derive2 { name="longmemo"; version="1.0-0"; sha256="1jnck5nfwxywj74awl4s9i9jn431655mmi85g0nfbg4y71aprzdc"; depends=[]; }; longpower = derive2 { name="longpower"; version="1.0-16"; sha256="0hbv43y0fgbv1qiczy4kibqc7pk7whrz4kyxshg8730y8g9wyxdi"; depends=[lme4 nlme]; }; longurl = derive2 { name="longurl"; version="0.3.0"; sha256="0ysa70zlkk3ybddj3yd3vbhjnkjbrisiz5a2hgbjx10p33m1r3am"; depends=[dplyr httr purrr]; }; - loo = derive2 { name="loo"; version="1.1.0"; sha256="0nh1jbrvm33v28gbys8sh6v4cxfzfd85561gz380b4kaahn2089l"; depends=[matrixStats]; }; + loo = derive2 { name="loo"; version="2.0.0"; sha256="1k2qhma7gm4l3h9wf5gh1gm09map2jqcdzz3pba4gf039n8h3gsl"; depends=[matrixStats]; }; lookupTable = derive2 { name="lookupTable"; version="0.1"; sha256="0ipy0glrad2gfr75kd8p3999xnfw4pgpbg6p064qa8ljqg0n1s49"; depends=[data_table dplyr]; }; loon = derive2 { name="loon"; version="1.1.1"; sha256="023vrnbn4pikiq6l57phwy9zy1lp6vxrkinrffaxwicvaj58c931"; depends=[]; }; loop = derive2 { name="loop"; version="1.1"; sha256="1gr257fm92rfh1sdhsb4hy0fzwjkwvwm3v85302gzn02f86qr5dm"; depends=[MASS]; }; @@ -7915,34 +8068,35 @@ in with self; { lpmodeler = derive2 { name="lpmodeler"; version="0.2-1"; sha256="17k67l03dkjx61p4hwswghjm6awk0zx173x9xafxrfd8jrgsf6kf"; depends=[slam]; }; lpridge = derive2 { name="lpridge"; version="1.0-7"; sha256="0nkl70fwzra308bzlhjfpkxr8hpd8v1xdnah7nscxa10qlisgr2k"; depends=[]; }; lqa = derive2 { name="lqa"; version="1.0-3"; sha256="141r2cd9kybi6n9jbdsvhza8jdxxqch4z3qizvpazjy8qifng29q"; depends=[]; }; - lqmm = derive2 { name="lqmm"; version="1.5.3"; sha256="1gl609irhxk7qi4x8as2xylc6iybm9jyrnm7dvb92nxl0ksp44v7"; depends=[nlme SparseGrid]; }; + lqmm = derive2 { name="lqmm"; version="1.5.4"; sha256="117g38m650mi28ff19nd71dadbdphd1ladmrip2kbsnkpcz2q37p"; depends=[nlme SparseGrid]; }; lqr = derive2 { name="lqr"; version="1.7"; sha256="110c18wc3y3nkdwjgrksw20kvvy65822njrpy4gwb100ifigw0v7"; depends=[ghyp spatstat]; }; lrequire = derive2 { name="lrequire"; version="0.1.3"; sha256="03c8h9v2xhlv7bj5jv117a27gaqaly2kdxs9zyihsm9yh9rg3d79"; depends=[]; }; lrgs = derive2 { name="lrgs"; version="0.5.3"; sha256="0aqz07vg3z52lq224mapwgwr9mspa7aswzdfngg6x933aqsha4gj"; depends=[mvtnorm]; }; lrmest = derive2 { name="lrmest"; version="3.0"; sha256="1yddkgza672z9y0ipgl92pg9prhmr387zsqf0qbi9k2yzfz2vvs6"; depends=[MASS psych]; }; lsa = derive2 { name="lsa"; version="0.73.1"; sha256="1af8s32hkri1hpngl9skd6s5x6vb8nqzgnkv0s38yvgsja4xm1g5"; depends=[SnowballC]; }; lsasim = derive2 { name="lsasim"; version="1.0.1"; sha256="0bwk6bv0wp30v6p55nyd1hcvwnjjddwccyy1swf6sg7lw3fy657p"; depends=[]; }; - lsbclust = derive2 { name="lsbclust"; version="1.0.4"; sha256="0a0l1vvr4gp1vvqccjicy4qh7l2kwyh7k503yi403d0987zqywcc"; depends=[clue ggplot2 gridExtra plyr Rcpp reshape2]; }; + lsbclust = derive2 { name="lsbclust"; version="1.0.5"; sha256="005kswkpp3qmrg5ij8999xambyyry5wajkawiwhv45niyi2hlkxv"; depends=[clue doParallel foreach ggplot2 gridExtra mvtnorm plyr Rcpp reshape2]; }; lsdv = derive2 { name="lsdv"; version="1.1"; sha256="0rl1xszr9r8v71j98gjpav30n2ncsci19hjlc9flzs1s20sb1xpr"; depends=[]; }; lsei = derive2 { name="lsei"; version="1.2-0"; sha256="1xl06fb3is744pxlh42wx5hn1h0ab1k31wnmsmh0524kxzcyp0a7"; depends=[]; }; - lsgl = derive2 { name="lsgl"; version="1.3.6"; sha256="0zkv5xgwrnwx0w0qpzsg7krd7fdnlr3a85q64xj1wx0gd578dqq6"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; }; lshorth = derive2 { name="lshorth"; version="0.1-6"; sha256="0nbjakx0zx4fg09fv26pr9dlrbvb7ybi6swg84m2kwjky8399vvx"; depends=[]; }; lsl = derive2 { name="lsl"; version="0.5.6"; sha256="1hwzklx1qp5ljc059j2hridg3caw4cgn7rbqs8xh2arzcvqdw3rb"; depends=[ggplot2 lavaan reshape2]; }; lslx = derive2 { name="lslx"; version="0.6.2"; sha256="0girzjmkmqym5bnw492991smyhvlz7xw70n8hlswpa4lw3x15q2n"; depends=[ggplot2 lavaan R6 Rcpp RcppEigen]; }; + lsm = derive2 { name="lsm"; version="0.1.6"; sha256="1j68jvb7gvgr77wpq1gzh1jw3cs94im1zrlnvw4jnbgbzsmpql99"; depends=[]; }; lsmeans = derive2 { name="lsmeans"; version="2.27-61"; sha256="0qw4lkgaynld56ywvdyy5nqvq7c6r2v24gsy54rkcw2n4xhlnahm"; depends=[coda estimability multcomp mvtnorm nlme plyr xtable]; }; + lspartition = derive2 { name="lspartition"; version="0.1"; sha256="1c2wp9yl0jzvbh181flzywwqmm6xr5jg9qbfibw4ja9wf6xnfx8w"; depends=[combinat ggplot2 MASS matrixStats mgcv pracma]; }; lspline = derive2 { name="lspline"; version="1.0-0"; sha256="0bc1nfpp1r5fi8rrg295k4r8pm03baqplrzwmk3sn4kdbp0apvgk"; depends=[]; }; lspls = derive2 { name="lspls"; version="0.2-1"; sha256="1g27fqhnx9db0zrxbhqr76agvxy8a5fx1bfy58j2ni76pki1y4rl"; depends=[pls]; }; lsplsGlm = derive2 { name="lsplsGlm"; version="1.0"; sha256="1qh68r033fwq1hc19h2srl1k6znvvvrcp38ghxadsksjfxllvniy"; depends=[]; }; lsr = derive2 { name="lsr"; version="0.5"; sha256="0q385a3q19i8462lm9fx2bw779n4n8azra5ydrzw59zilprhn03f"; depends=[]; }; lss = derive2 { name="lss"; version="0.52"; sha256="1fvs8p9rhx81xfn450smnd0i1ym06ar6nwwcpl74a66pfi9a5sbp"; depends=[quantreg]; }; ltbayes = derive2 { name="ltbayes"; version="0.4"; sha256="0kv5k56hmc1m7bv5pmmmk46822szsgwqgpwydn0x56az7xn6hjk6"; depends=[mcmc MHadaptive numDeriv]; }; - ltm = derive2 { name="ltm"; version="1.1-0"; sha256="1gxjz3rn5bacv7xdlinzk6rdcwragb76grjpk5wqs4shqbk0rld2"; depends=[MASS msm polycor]; }; + ltm = derive2 { name="ltm"; version="1.1-1"; sha256="1qrgzwx5l58qf5rfp1knxc84r0g943q5sdr3ky74zzwpnmrf2vf7"; depends=[MASS msm polycor]; }; ltmle = derive2 { name="ltmle"; version="1.0-1"; sha256="0g3nybhxz7mivqkzvlzkasc1m489s4fsi4874wvlhqg3x3mww0x9"; depends=[Matrix matrixStats speedglm]; }; ltsa = derive2 { name="ltsa"; version="1.4.6"; sha256="10wmw9r00400ng2zlysd8jqgypjclshxj83x32002j2a9cz4f186"; depends=[]; }; ltsbase = derive2 { name="ltsbase"; version="1.0.1"; sha256="16p5ln9ak3h7h0icv5jfi0a3fbw5wdqs3si69sjbn8f5qs2hz7yp"; depends=[MASS robustbase]; }; ltsk = derive2 { name="ltsk"; version="1.0.5"; sha256="0x142w2l6qaqw1kmx5kix7lkadaw2kl8dqx11d091vqj2imi9wlr"; depends=[fields gstat sp]; }; ltxsparklines = derive2 { name="ltxsparklines"; version="1.1.2"; sha256="1jnygg7wm2768lrrzball8rn8f60xy4nc3a18h4d32jpnbhifj13"; depends=[]; }; - lubridate = derive2 { name="lubridate"; version="1.7.3"; sha256="1pzkqfiahnsdm3zx46asgn8fw43vlxvbh7r4cn70c7ffmxabzzrc"; depends=[Rcpp stringr]; }; + lubridate = derive2 { name="lubridate"; version="1.7.4"; sha256="14a823il77w3wmmnzr89vwrqp50y56dh5raycnaw6c8nv5xsh32i"; depends=[Rcpp stringr]; }; luca = derive2 { name="luca"; version="1.0-5"; sha256="1jiqwibkrgga4ahz0qgpfkvrsxjqc55i2nwnm60xddb8hpb6a6qx"; depends=[genetics survival]; }; lucid = derive2 { name="lucid"; version="1.4"; sha256="1kwl9h7ynp8nhny51xskrbgc3060bawxjkdijhsjzss2hbbygwds"; depends=[nlme]; }; lucr = derive2 { name="lucr"; version="0.2.0"; sha256="0v5g72cl9fg3b3ix34bsmjwwqrnm4ivgcd5mm98c5jd8rrz1xkwq"; depends=[httr Rcpp]; }; @@ -7993,15 +8147,16 @@ in with self; { magicLamp = derive2 { name="magicLamp"; version="0.1.0"; sha256="1nfcnbqd6vawz8l3vgkbhmm462xdvaa4pn6axzmz8hl05xv2k3cv"; depends=[httr tibble]; }; magicaxis = derive2 { name="magicaxis"; version="2.0.3"; sha256="08nkf9k2ijlm52ybncfiwrghy911wpvwpvdvllcz2d4slk1vdakj"; depends=[celestial mapproj MASS plotrix sm]; }; magicfor = derive2 { name="magicfor"; version="0.1.0"; sha256="07l33fczr1x42sfxrsqq4q6r65sdflin6l8f5cgclnvx1858jdip"; depends=[]; }; - magick = derive2 { name="magick"; version="1.7"; sha256="09dcgfbpp6lls943yps3qaylrs6n9dd1svwab5rmwj0fa4ph2by4"; depends=[curl knitr magrittr Rcpp]; }; + magick = derive2 { name="magick"; version="1.8"; sha256="0qi86fhqaxad9bbigfv1czxhxqi3x49376pyhfkw7lc7r2fxkx6y"; depends=[curl knitr magrittr Rcpp]; }; magree = derive2 { name="magree"; version="1.0"; sha256="1qkd6p5g3aigcb0f4d08gc5323alvahzmazm3bzsmz1w033xd1hh"; depends=[]; }; magrittr = derive2 { name="magrittr"; version="1.5"; sha256="1s1ar6rag8m277qcqmdp02gn4awn9bdj9ax0r8s32i59mm1mki05"; depends=[]; }; mail = derive2 { name="mail"; version="1.0"; sha256="1m89cvw5ba4d87kp2dj3f8bvd6sgj9k56prqmw761q919xwprgw6"; depends=[]; }; mailR = derive2 { name="mailR"; version="0.4.1"; sha256="1bfh3fxdqx9f9y3fgklxyslpcvhr9gcj7wsamaxzgrcsaxm8fdlw"; depends=[R_utils rJava stringr]; }; makeFlow = derive2 { name="makeFlow"; version="1.0.2"; sha256="0r7a0klgx144rnks0fhjflnf8vfyyx2544n86nnxkp6cdvw0b4pw"; depends=[dplyr RColorBrewer]; }; makeProject = derive2 { name="makeProject"; version="1.0"; sha256="09q8xa5j4s5spgzzr3y06l3xis93lqxlx0q66s2nczrhd8nrz3ca"; depends=[]; }; - makedummies = derive2 { name="makedummies"; version="1.0"; sha256="1kyx0n620pnaaxi136f81kr55v94zlw2bikrky1sq9bhrvdlf7yh"; depends=[]; }; + makedummies = derive2 { name="makedummies"; version="1.1"; sha256="1qpkghlgkzpzai290kidkmwhn4aj0balb17rs2l5amsml942lq0a"; depends=[]; }; malani = derive2 { name="malani"; version="1.0"; sha256="1jps28gfkiysr356ackxf1my5xz6rpx3a2bv68pziy2614hrqbs9"; depends=[e1071]; }; + malariaAtlas = derive2 { name="malariaAtlas"; version="0.0.1"; sha256="1c1bvfs1azvlci2yrgw5xlr460fdjwikm3vsdfz8lj1xzs1w220c"; depends=[curl dplyr ggplot2 gridExtra httr raster rgdal sp stringi tidyr xml2]; }; mallet = derive2 { name="mallet"; version="1.0"; sha256="06rksf5nvxp4sizgya7h4sb6fgw3yz212a01dqmc9p5a5wqi76x0"; depends=[rJava]; }; managelocalrepo = derive2 { name="managelocalrepo"; version="0.1.5"; sha256="180b7ikas1kb7phm4l2z1d8wi45wi0qyz2c8rl8ml3f71b4mlzgc"; depends=[assertthat stringr]; }; mandelbrot = derive2 { name="mandelbrot"; version="0.2.0"; sha256="04a288jj8h1a04r584a02wg9dm3c6zifhqwj964ybsvgb4m6g99s"; depends=[reshape2]; }; @@ -8010,19 +8165,19 @@ in with self; { manhattanly = derive2 { name="manhattanly"; version="0.2.0"; sha256="185fkakx4v35n4gmlpk2kfm2bm8p320q4khkw936m09zx3aqz398"; depends=[ggplot2 magrittr plotly]; }; manifestoR = derive2 { name="manifestoR"; version="1.2.4"; sha256="1hd4qsa2xsa1dq5jnwh1bph34glkpaabjmsnavdjhkfzjilp32ya"; depends=[base64enc dplyr functional httr jsonlite magrittr NLP psych tibble tm zoo]; }; manipulate = derive2 { name="manipulate"; version="1.0.1"; sha256="1klknqdfppi5lf6zbda3r2aqzsghabcsaxmvd3vw3cy3aa984zky"; depends=[]; }; - manipulateWidget = derive2 { name="manipulateWidget"; version="0.8.0"; sha256="19vcf3q2q8r53dygc8kh7pbcbjs9q6knylz2jnc9pwxq3wdkbrp7"; depends=[base64enc codetools htmltools htmlwidgets knitr miniUI shiny]; }; + manipulateWidget = derive2 { name="manipulateWidget"; version="0.9.0"; sha256="18zk1f3dk63crpfpljafakdvfvd0494kbws0dwahwfr60avvvx2v"; depends=[base64enc codetools htmltools htmlwidgets knitr miniUI shiny]; }; mapReasy = derive2 { name="mapReasy"; version="1.0"; sha256="13va0z967ckwxnnianki5aj66km0x6r37nj4mz9qd3b0bps4g2kj"; depends=[Hmisc rgdal sp]; }; mapStats = derive2 { name="mapStats"; version="2.4"; sha256="18pp1sb9p4p300ffvmzjrg5bv1i7f78mhpggq83myc26c3a593na"; depends=[classInt colorspace Hmisc lattice maptools RColorBrewer reshape2 sp survey]; }; - mapdata = derive2 { name="mapdata"; version="2.2-6"; sha256="0k3hsnyvax20jph384gca10rl7a9fcglgkqcjsc5hndx3qrwpanv"; depends=[maps]; }; + mapdata = derive2 { name="mapdata"; version="2.3.0"; sha256="0xnxh73rgcq55zrw81a2bq8yd67bxc2rafp4shf6nyrqj04iip0y"; depends=[maps]; }; mapedit = derive2 { name="mapedit"; version="0.4.1"; sha256="1dy87kmwra917716r99hp139fbxy3z0cx03cw61b832isizd0b51"; depends=[dplyr htmltools htmlwidgets jsonlite leaflet leaflet_extras mapview miniUI sf shiny]; }; mapfit = derive2 { name="mapfit"; version="0.9.7"; sha256="16a318bz3my27qj0xzf40g0q4bh9alg2bm6c8jbwgswf1paq1xmx"; depends=[Matrix]; }; mapfuser = derive2 { name="mapfuser"; version="0.1.2"; sha256="1q7l6rfs6dv76ifizfqq4pdpjpb2zwzd3vvrnhdzh8vw2mrlqcjg"; depends=[doParallel dplyr foreach ggplot2 igraph lazyeval LPmerge mgcv plotly stringi tidyr visNetwork]; }; - mapmisc = derive2 { name="mapmisc"; version="1.7.0"; sha256="0m8a0zzdrmqkkv9clfar9acij80fmanqny08g9xlir14620aq38c"; depends=[raster sp]; }; + mapmisc = derive2 { name="mapmisc"; version="1.7.2"; sha256="0w0yvdnxk6gjcc86b6imq764va9f9hjan3ayw7qrbjpqx16fs7dx"; depends=[raster sp]; }; mapplots = derive2 { name="mapplots"; version="1.5"; sha256="09sk78a0p8hlwhk3w2dwvpb0a6p7fqdxyskvz32p1lcav7y3jfrb"; depends=[]; }; - mapproj = derive2 { name="mapproj"; version="1.2-5"; sha256="0rjz37r4rizk2c6jaf54f0kfb60dqv6b262cnhiwjl55d4x6l0pk"; depends=[maps]; }; - mapr = derive2 { name="mapr"; version="0.3.4"; sha256="14f7zfzxb1h935bbybj2l2n4a62cnq0wvgmc09in0fvnl75jl971"; depends=[ggplot2 gistr jsonlite leaflet RColorBrewer rworldmap sp spocc]; }; - maps = derive2 { name="maps"; version="3.2.0"; sha256="0577f3b5d3a7djl7r0miy9mzr6xq6jb32p8nyrma7m2azasbwyj3"; depends=[]; }; - mapsapi = derive2 { name="mapsapi"; version="0.3.0"; sha256="070dckm5dkicmwkpji4zvap9h9rl3n3l7fxhz2ryslblbrzx70fn"; depends=[bitops magrittr plyr sf xml2]; }; + mapproj = derive2 { name="mapproj"; version="1.2.6"; sha256="1rggww8cbwv0vzlj5afzhbsbngg4bzj5znbkz7wmxsbshfbsm9b2"; depends=[maps]; }; + mapr = derive2 { name="mapr"; version="0.4.0"; sha256="169ah9v7cpw3hmaj6n575gi1zwazf4vh59n46zghb1x68nc2gqs0"; depends=[data_table ggplot2 gistr jsonlite leaflet RColorBrewer rworldmap sp spocc]; }; + maps = derive2 { name="maps"; version="3.3.0"; sha256="05i2ppl5z4p8rawgqmy3z4ia05fcblpq1vvrmrkgkkpdlhczx6hr"; depends=[]; }; + mapsapi = derive2 { name="mapsapi"; version="0.3.5"; sha256="0v33kkny98xql6m6rp2xh39rsp00r1crpin8gqw5wh5x28n20sna"; depends=[bitops magrittr plyr sf xml2]; }; maptools = derive2 { name="maptools"; version="0.9-2"; sha256="075lmb3b62171cw2dg8fv1vwmvfzg39r1ji7jwb8s5k9dz88ry1v"; depends=[foreign lattice sp]; }; maptpx = derive2 { name="maptpx"; version="1.9-2"; sha256="1i5djmjg0lsi7xlkbvn90njq1lbyi74zwc2nldisay4xsbgqg7fj"; depends=[slam]; }; maptree = derive2 { name="maptree"; version="1.4-7"; sha256="1k7v84wvy6wz6g0dyiwvd3lvf78rlfidk60ll4fz7chvr2nrqdp4"; depends=[cluster rpart]; }; @@ -8031,20 +8186,19 @@ in with self; { march = derive2 { name="march"; version="1.4"; sha256="1wfhm33k2j5yim56sg0wd02ypfhlp9fc138vmdsdjp6nh4y23hnj"; depends=[]; }; marcher = derive2 { name="marcher"; version="0.0-2"; sha256="0hcxbfrwniih4kvx5sxhlffz1pc87kf52v8hvaf193rhhdykis5q"; depends=[magrittr Matrix minpack_lm mvtnorm numDeriv plyr RColorBrewer scales zoo]; }; marelac = derive2 { name="marelac"; version="2.1.6"; sha256="024gbrdby6h722j58wl8xn8027sanlpnz1l3hhxnllwzbz3mbdz4"; depends=[seacarb shape]; }; - marg = derive2 { name="marg"; version="1.2-2"; sha256="0j08zzcrj8nqsargi6xi50gy9pl4smmsp4b7ywlga7r1ga38g82r"; depends=[statmod survival]; }; + marg = derive2 { name="marg"; version="1.2-2.1"; sha256="1r6rl7dhvm8dghm7pm4hfw3924qja65hczl6d47v9ixnv4rxyzr9"; depends=[statmod survival]; }; margins = derive2 { name="margins"; version="0.3.0"; sha256="0i6c39acyyvxsx2lkza2afjyhpdlb9fx0zssr24g0xdk3f7c2dc2"; depends=[MASS prediction]; }; marima = derive2 { name="marima"; version="2.2"; sha256="03nvh93r4052li84yjqzc106gwh1542q9s192s980gs6sgy8scm6"; depends=[]; }; marinespeed = derive2 { name="marinespeed"; version="0.1.0"; sha256="1r9bpggb88px8149dsga3xmkjhjq6ybs6a5kp60qz28iyr183mar"; depends=[bit geosphere sp]; }; markdown = derive2 { name="markdown"; version="0.8"; sha256="1vcgsh2m2f5kfgappgg71nbf04ff0j1sbk668krjs3r2n89dk3sk"; depends=[mime]; }; - marked = derive2 { name="marked"; version="1.1.13"; sha256="0zgfd7fdcrvvqnlgzarly16zjnipshxsa1g3j9jqc5kbqvh7fnh2"; depends=[coda expm lme4 Matrix numDeriv optimx R2admb Rcpp TMB truncnorm]; }; + marked = derive2 { name="marked"; version="1.2.1"; sha256="138m1clidyhahpz111iblff2w44m8zp0302vcj46frk1c60c46qi"; depends=[coda expm lme4 Matrix numDeriv optimx R2admb Rcpp TMB truncnorm]; }; markmyassignment = derive2 { name="markmyassignment"; version="0.8.1"; sha256="1y388s73b1zs482d1d7z40kg4hizp46lc3279xspm2ryx4m49mzj"; depends=[checkmate codetools httr lazyeval rlang testthat yaml]; }; markophylo = derive2 { name="markophylo"; version="1.0.6"; sha256="1gyj3ykwh4ljrb5s80hihy7wl89y3p4xkckspvv4ynl9lnsbm7cs"; depends=[ape numDeriv phangorn Rcpp RcppArmadillo]; }; markovchain = derive2 { name="markovchain"; version="0.6.9.8-1"; sha256="1av89829fwnf2bll7b75v2vrglw4130d5c42c3i1fiqh54jxjy7k"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; }; marl = derive2 { name="marl"; version="1.0"; sha256="0rndnf3rbcibv3gsrw1kfp5zhg37cw9wwlz0b7dbwprd0m71l3pm"; depends=[]; }; - marmap = derive2 { name="marmap"; version="0.9.6"; sha256="1b0mpygk18ri0xs9f56j2g7zmka7krnw7fmh9m9xisbvq2g23g92"; depends=[adehabitatMA DBI gdistance geosphere ggplot2 ncdf4 plotrix raster reshape2 RSQLite shape sp]; }; + marmap = derive2 { name="marmap"; version="1.0"; sha256="187zqmpdd4kl5dviphfzdhjlaa9bss1gx4wxxc8zgn4q1g66f4c2"; depends=[adehabitatMA DBI gdistance geosphere ggplot2 ncdf4 plotrix raster reshape2 RSQLite shape sp]; }; marqLevAlg = derive2 { name="marqLevAlg"; version="1.1"; sha256="1wmqi68g0flrlmj87vwgvyxap0miss0n42qiiw7ypyj4jw9kwm8j"; depends=[]; }; mason = derive2 { name="mason"; version="0.2.5"; sha256="1v2gja8kbwzx5c8y8gchh4rwwprv99ad0nhgb0hnfgjnqsbdmdv7"; depends=[assertive broom dplyr lazyeval magrittr tidyr]; }; - matR = derive2 { name="matR"; version="0.9"; sha256="0lih3g2z6rxykprl3s529xcf466bpzpsv4l20dkgx1fgfslfcl2p"; depends=[BIOM_utils MGRASTer]; }; matchMulti = derive2 { name="matchMulti"; version="1.1.6"; sha256="05nkrncrf7vq2bmqbhm9n6p6cyb4drbhjrrfdcw6qcdgvh3bbiy0"; depends=[coin Hmisc MASS mvtnorm plyr rcbsubset weights]; }; matchbook = derive2 { name="matchbook"; version="1.0.7"; sha256="0xfqg8z2zkn215kqmjjkqdwrgsk7cn4jdpxfgd6razhcbvflg48j"; depends=[]; }; matchingMarkets = derive2 { name="matchingMarkets"; version="0.3-5"; sha256="083gnqjxvzgqd0lvg13qwzw3cp1imp4xn2nacspfxqg4878jjpn3"; depends=[lattice lpSolve partitions Rcpp RcppArmadillo RcppProgress rJava]; }; @@ -8056,7 +8210,7 @@ in with self; { matie = derive2 { name="matie"; version="1.2"; sha256="1ymx49cyvz63imqw5n48grilphiqvvdirwsrv82p7jgxdyav2xv0"; depends=[cba dfoptim gplots igraph mvtnorm seriation]; }; matlab = derive2 { name="matlab"; version="1.0.2"; sha256="0m21k2vzbc5d3c93p2hk4208xyd2av2slg55q5j1ibjidiryqgd2"; depends=[]; }; matlabr = derive2 { name="matlabr"; version="1.5.0"; sha256="0gy639fv0b85h4z96b2b3m635q4w62q63kfxfqny3pwr0r5vsc2p"; depends=[stringr]; }; - matlib = derive2 { name="matlib"; version="0.8.1"; sha256="080mbmr1lb5ha5ql40hv0idcnnbyaai46c42z756kdyq9pdzcabf"; depends=[car rgl]; }; + matlib = derive2 { name="matlib"; version="0.9.1"; sha256="03991ckrfk663pdi9q2a4sms9csr1dkr075dsycqggr96yp1cwh8"; depends=[car MASS rgl xtable]; }; matpow = derive2 { name="matpow"; version="0.1.1"; sha256="1a6q21ba16qfdpykmjwgmrb1kkvvyx48qg8cbgpdmch0vhibcgcp"; depends=[]; }; matrixLaplacian = derive2 { name="matrixLaplacian"; version="1.0"; sha256="1ixqdv3sz3sc79wn3vqhlq79j7x7cvl878m5hgvbcg6klfvlmmci"; depends=[scatterplot3d]; }; matrixStats = derive2 { name="matrixStats"; version="0.53.1"; sha256="0bkiz5fm09d3512mfr2ymj9qsb1b8aic5l5m6fkaf5j7nsgvqw6z"; depends=[]; }; @@ -8067,6 +8221,7 @@ in with self; { mau = derive2 { name="mau"; version="0.1.2"; sha256="1wgiai8f1kbjh9hfwv4m0kavd44ib5xb33p8m16zpawnw14m7sj5"; depends=[data_table ggplot2 gtools igraph RColorBrewer Rdpack stringr]; }; maxLik = derive2 { name="maxLik"; version="1.3-4"; sha256="0jjb5kc7dvx940ybg7b7z9di79v75zm2xlb0kj2y7rmi45vvh6hq"; depends=[miscTools sandwich]; }; maxTPR = derive2 { name="maxTPR"; version="0.1.0"; sha256="13x5rz0mfha5pzahkk4x67ncz9v77sa690cyl6wigwsldsrvzr3h"; depends=[aucm Rsolnp]; }; + maxadjAUC = derive2 { name="maxadjAUC"; version="0.1.0"; sha256="04zdaqmavhhrj63s2k5pqncvlzbfnxan7r0fagfka9dypwwcl5qm"; depends=[aucm Hmisc Rsolnp survival]; }; maxent = derive2 { name="maxent"; version="1.3.3.1"; sha256="1skc7d0p6kg0gi1bpgaqn2dmxjzbvcphx5x3idpscxfbplm5v96p"; depends=[Rcpp SparseM tm]; }; maxlike = derive2 { name="maxlike"; version="0.1-7"; sha256="0gi33hcjj456sjw7l3q4n46k4cb6m3ml3ycd93pnajxacl24swbb"; depends=[raster]; }; maxmatching = derive2 { name="maxmatching"; version="0.1.0"; sha256="1xbwrhmr8gzvlcprib7nzvqrcd355bhx7wkqxrvfk4g7dvskf9ka"; depends=[igraph]; }; @@ -8091,21 +8246,22 @@ in with self; { mcPAFit = derive2 { name="mcPAFit"; version="0.1.4"; sha256="1h5kiry8bvdrgyqf7cqsag0b7rscwc7phayzf6h4css1667bvm0g"; depends=[PAFit RColorBrewer Rcpp]; }; mcbiopi = derive2 { name="mcbiopi"; version="1.1.2"; sha256="12h4bv3hx1m6bsqdxj5n3b5gh98ms508am8pigz7ckmv0xkyhx85"; depends=[]; }; mcc = derive2 { name="mcc"; version="1.0"; sha256="0p661a870bvh3xhcahqqq85azn9rjl3vacjy96jsdn86irj4s0vi"; depends=[]; }; - mcca = derive2 { name="mcca"; version="0.2.0"; sha256="01c7dp9m8vqffhq0ixsqcfw40jsmb6dwiblym31h84f9s0x4f00j"; depends=[e1071 MASS nnet pROC rpart]; }; + mcca = derive2 { name="mcca"; version="0.3.0"; sha256="0fmlqk4q2vy7gzxhvb9249f1644jlvy755cpda8kvwp9qk55bp4p"; depends=[caret e1071 MASS nnet pROC rpart]; }; mcclust = derive2 { name="mcclust"; version="1.0"; sha256="00qprmsjwbn2d0jl7p9mz8pv7k8ld3mzk862pr1grigk0lqwhx06"; depends=[lpSolve]; }; mccr = derive2 { name="mccr"; version="0.4.4"; sha256="1scqds1yx317qmjappy2h1m564dcmsqqfpdm8pm3plalag16xrhj"; depends=[]; }; mcemGLM = derive2 { name="mcemGLM"; version="1.1"; sha256="07ky3bvcns24qia9pyvf5lp7764h8gn2g8zr304iz4x9bq6jvsi0"; depends=[Rcpp RcppArmadillo trust]; }; mcga = derive2 { name="mcga"; version="3.0.1"; sha256="0q0nn881lii8wfw28k8jh9z0kbi5ljcwi2wpq460k2w3agsjzw5n"; depends=[GA Rcpp]; }; mcgibbsit = derive2 { name="mcgibbsit"; version="1.1.0"; sha256="09ydcbjz3abmh46966v01dh26fy79dfklk3zjf262zp3c62ld9yf"; depends=[coda]; }; - mcglm = derive2 { name="mcglm"; version="0.3.0"; sha256="1q2zc0xn4inp9inadb52yc0svbh581qxxjzc08pgrm9l3xms4a14"; depends=[assertthat Matrix]; }; + mcglm = derive2 { name="mcglm"; version="0.4.0"; sha256="0k5zkdq3c4fvyhk0lfwikmrxcrd2hg3s820l8rswz7xhl645zr5a"; depends=[assertthat Matrix]; }; mcheatmaps = derive2 { name="mcheatmaps"; version="1.0.0"; sha256="1gglm32xpmim38m7fziczgqfbpcq2899lxardsrzg6j1vhmf765y"; depends=[gridBase]; }; - mclcar = derive2 { name="mclcar"; version="0.1-8"; sha256="1hrjfjbsxh8g6bw2cfxciry8hn9xxfg4bww5p1sjq98v8bsqcx23"; depends=[fields maxLik nleqslv rsm spam spdep]; }; + mclcar = derive2 { name="mclcar"; version="0.1-9"; sha256="0bwnivmajsrvmwskhk44qhz4nnc0irxq83g0kzbj4wshhivnwryp"; depends=[fields maxLik nleqslv rsm spam spdep]; }; mcll = derive2 { name="mcll"; version="1.2"; sha256="0i9zqbh0l9a9mv4558gbdq9mh52chanykyfwmiymmxygxhp809sz"; depends=[locfit statmod]; }; mclogit = derive2 { name="mclogit"; version="0.5.1"; sha256="1qnkkjq7gxivpz3mmbq5dx9a128r3xhrdzx96kc80h3w67yc7hbl"; depends=[Matrix memisc]; }; mclust = derive2 { name="mclust"; version="5.4"; sha256="1i3v1q8qq0al3ifvjhcvxfsg68cx9mq8jz67jwmiqai78mw0aqvk"; depends=[]; }; - mclustcomp = derive2 { name="mclustcomp"; version="0.2.0"; sha256="0ijsy1p80bqbknw9did3dqa90ck7zd0xplvw870578h4x5q30qdp"; depends=[Rcpp RcppArmadillo]; }; + mclustcomp = derive2 { name="mclustcomp"; version="0.3.0"; sha256="02j87p2z9z3b8kxnvnm1syjpv6axcs09fs3mnrl1n2q6jyc4gwsr"; depends=[Rcpp RcppArmadillo Rdpack]; }; mcmc = derive2 { name="mcmc"; version="0.9-5"; sha256="1i3rahph8pbhi5dsyjnkazqklg4lhh3azlyvx4kvabx50q0awxn6"; depends=[]; }; mcmcplots = derive2 { name="mcmcplots"; version="0.4.2"; sha256="0ws2la6ln016l98c1rzf137jzhzx82l4c49p19yihrmrpfrhr26l"; depends=[coda colorspace denstrip sfsmisc]; }; + mcmcr = derive2 { name="mcmcr"; version="0.0.1"; sha256="0g64df8v6snbcmk0kynfppq1mqaz9z8apfsm1zn3ch5q2afg0kqy"; depends=[abind checkr coda tibble]; }; mcmcse = derive2 { name="mcmcse"; version="1.3-2"; sha256="0yz0zhqhsxxg1b0cf15ijxfj4q8csjng18bmq45anabllq16ymkj"; depends=[ellipse Rcpp RcppArmadillo]; }; mco = derive2 { name="mco"; version="1.0-15.1"; sha256="14y10zprpiflqsv5c979fsc2brgxay69kcwm7y7s3gziq74fn4rw"; depends=[]; }; mcompanion = derive2 { name="mcompanion"; version="0.4-5"; sha256="18l29cbggf5mdab8vdzmbsnc0p77llaq3ylp07a7gsq44bys8zq0"; depends=[gbutils MASS Matrix Rdpack]; }; @@ -8123,7 +8279,7 @@ in with self; { mdhglm = derive2 { name="mdhglm"; version="1.6"; sha256="1lvckais4c3pbf6zrpfkdlyqhcg4jaw11n00622h9ks413fl788v"; depends=[boot Matrix mvtnorm numDeriv]; }; mdmb = derive2 { name="mdmb"; version="0.6-17"; sha256="1ydvfjqid7bsgryr8j77ajmh2q40s3gh67n8027f70pa8amr9fnq"; depends=[CDM coda MASS miceadds sirt TAM]; }; mdpeer = derive2 { name="mdpeer"; version="1.0.1"; sha256="1vsqhah8h47s8k687fwa352549mdz16mwk1g7rcmhx75c2k85w2q"; depends=[boot ggplot2 glmnet magic nlme nloptr psych reshape2 rootSolve]; }; - mdsOpt = derive2 { name="mdsOpt"; version="0.2-2"; sha256="1wg0f2a3z5pdiw8lljfrifn7lf00rza8rmrdh61dmna2nkrg9j4g"; depends=[clusterSim smacof symbolicDA]; }; + mdsOpt = derive2 { name="mdsOpt"; version="0.3-1"; sha256="0fyzmbaqnj42nhl32cj1kycrqkfx2qvb5vpi0qj98fi6iwsa4psq"; depends=[animation clusterSim plotrix smacof smds spdep symbolicDA]; }; mdscore = derive2 { name="mdscore"; version="0.1-3"; sha256="10cl5r6kd9chdik5v0q91x40xpw2cjvvyi220z4bvngpb0989x8j"; depends=[MASS]; }; mdsdt = derive2 { name="mdsdt"; version="1.2"; sha256="0nbzc54jac4wmfyrs821ycxh749cb1zfxcws0nbpk35rydqkc627"; depends=[ellipse mnormt polycor]; }; mdsr = derive2 { name="mdsr"; version="0.1.5"; sha256="0b80l478v68w91vsmvvyvnmk0yasybmm013psy4181lhvxc93kma"; depends=[babynames DBI dbplyr downloader dplyr ggplot2 mosaic RMySQL tidyverse]; }; @@ -8132,7 +8288,7 @@ in with self; { meanShiftR = derive2 { name="meanShiftR"; version="0.51"; sha256="0qcciayriygfwkb15n863amcpcfl97fr1sarwm3d269idf5m7w6x"; depends=[]; }; meanr = derive2 { name="meanr"; version="0.1-1"; sha256="080x21jnbsl6qlrgv12p9qd332ciph3lh18fgs9jagfyygf4f9hg"; depends=[]; }; measuRing = derive2 { name="measuRing"; version="0.5"; sha256="0yblqkv5444y75jkb6d0zs728i6vybm294h7b5622pwfjqlfhnh2"; depends=[dplR pastecs png tiff]; }; - measurements = derive2 { name="measurements"; version="1.1.0"; sha256="1zi6mpwyxycbphq48s7vfc8gm76nidpa2gafp0jxiv56rwpv3jc3"; depends=[]; }; + measurements = derive2 { name="measurements"; version="1.2.0"; sha256="1k47xmydgd9lhc6phr40zphnibiq817f5nf8619ibla2pridjn1l"; depends=[]; }; meboot = derive2 { name="meboot"; version="1.4-7"; sha256="1i0h71aj49hyj889447s611gz668ys7xlr1i82b5nvaf6chfbfin"; depends=[dynlm nlme]; }; mederrRank = derive2 { name="mederrRank"; version="0.0.8"; sha256="1fvvik3bhjm6c0mhi2ma915986k2nj3lr2839k5hfrr7dg3lw3f4"; depends=[BB numDeriv]; }; medfate = derive2 { name="medfate"; version="0.2.2"; sha256="1vw9j04063sjwyfdkk94xsgz5zps7vmqha6dbsvi8ncb951cfijp"; depends=[meteoland Rcpp sp spdep]; }; @@ -8143,27 +8299,27 @@ in with self; { medmod = derive2 { name="medmod"; version="1.0.0"; sha256="1f7bzdcjnbz9izlfblxcaa85qxx8kzn62qgjd3qlb7jl7mdy5q54"; depends=[ggplot2 jmvcore lavaan R6]; }; meetupapi = derive2 { name="meetupapi"; version="0.1.0"; sha256="1iaxpfzgn478np9cjwz0zalfy1p7jwabnwpfv31svw052i8bs9yl"; depends=[dplyr httr magrittr purrr]; }; mefa = derive2 { name="mefa"; version="3.2-7"; sha256="1qrf6d3y38q7yy6bg3bxg7514d9paz1f8y6sr7lbksi30qn92fmj"; depends=[]; }; - mefa4 = derive2 { name="mefa4"; version="0.3-4"; sha256="11zg30i2fkxdv8fn7jilbmm7k5g0ls8f91bpq6qiwiagwg8gj2lh"; depends=[Matrix pbapply]; }; + mefa4 = derive2 { name="mefa4"; version="0.3-5"; sha256="19khmc7jxwlvjyr5gpmmz4pv60xzgjw3npx1iqv1ayx8ghpsmaj0"; depends=[Matrix pbapply]; }; meifly = derive2 { name="meifly"; version="0.3"; sha256="1x3lhy7fmasss0rq60z5qp74ni32sahw62s8cnp2j431sp95pczc"; depends=[leaps MASS plyr]; }; mekko = derive2 { name="mekko"; version="0.1.0"; sha256="09y50k4r4mnx351a5zhkqg9s2xyl3d149dhmfy2z6hzm5yg2ajyi"; depends=[ggplot2]; }; - meltt = derive2 { name="meltt"; version="0.3.3"; sha256="08qifdpk0c9digpayw1d9h2p9q4nyrlihg8kjqacirb5wh39wr6r"; depends=[ggmap ggplot2 plotGoogleMaps plyr reticulate scales sp]; }; + meltt = derive2 { name="meltt"; version="0.4.0"; sha256="0m0r7in1s8vq2pvq7pxgwjfhqds8pwhcrn5hy0wa126s1y88v34x"; depends=[dplyr ggplot2 leaflet plyr Rcpp RcppArmadillo reticulate shiny shinyjs tibble tidyr]; }; melviewr = derive2 { name="melviewr"; version="0.0.1"; sha256="19syc3d6zc0hmcjjdj7ibrdqxcdlh95ny970f3ska453qh1898b2"; depends=[cairoDevice gtools gWidgets gWidgetsRGtk2 jsonlite RColorBrewer RGtk2 RNifti]; }; mem = derive2 { name="mem"; version="2.12"; sha256="0075i2mbkck06bljck44d26ys68p8vjfb1jhgzrjy1sv2g2w0qa8"; depends=[boot dplyr ggplot2 mclust RColorBrewer reshape2 sm stringr tidyr]; }; - memapp = derive2 { name="memapp"; version="2.8"; sha256="0y5wl0rv1s8dgxhb0q42wy5rlj4smw9pz7a4j23195llql8lfc9m"; depends=[dplyr DT formattable ggplot2 ggthemes magrittr mem openxlsx plotly RColorBrewer readxl RODBC shiny shinyBS shinydashboard shinyjs shinythemes stringi stringr tidyr]; }; - meme = derive2 { name="meme"; version="0.1.1"; sha256="102z3zgfldggcykb7wlmw0wbdas6jbpvy2kfdps0wky3j552ir95"; depends=[ggplot2 magick showtext sysfonts]; }; + memapp = derive2 { name="memapp"; version="2.9"; sha256="1g53c90yvh34jisbcy5nvch7yyi7yxx7sg32492rk97h6hr2j8qv"; depends=[dplyr DT formattable ggplot2 ggthemes magrittr mem openxlsx plotly RColorBrewer readxl RODBC shiny shinyBS shinydashboard shinyjs shinythemes stringi stringr tidyr]; }; + meme = derive2 { name="meme"; version="0.2.0"; sha256="17zpnspc90nlga3iyl4ahasr70mnrhzja4pz7zhmjddhzjs8x3sz"; depends=[ggplot2 magick showtext sysfonts]; }; memery = derive2 { name="memery"; version="0.4.2"; sha256="0wfp3hf567a1q6mhrsgn4hr8x52yp4na8783f2d19hm0c3r4z51q"; depends=[Cairo colourpicker cowplot ggplot2 jpeg magrittr png purrr shiny shinyBS shinycssloaders showtext sysfonts]; }; memgene = derive2 { name="memgene"; version="1.0"; sha256="00b1mi2hvzzps542mh2p96s27kjqkpcic7djklfcwnfn1m4bz0i5"; depends=[ade4 gdistance raster vegan]; }; memisc = derive2 { name="memisc"; version="0.99.14.9"; sha256="1gh6shm9nwfjwfi5f4cz2jsldfdnkj6f73279l86wki5gdf36zri"; depends=[lattice MASS repr]; }; memo = derive2 { name="memo"; version="1.0.1"; sha256="14nvqi1qsin45ksd0wp9cigjk1gghr4jijdqkaqh177dwa244r9j"; depends=[digest]; }; memoise = derive2 { name="memoise"; version="1.1.0"; sha256="034qfc2xlh30x1q2vya239w34a3ir3y2fwnx2agbgbi6592zjxmj"; depends=[digest]; }; memuse = derive2 { name="memuse"; version="4.0-0"; sha256="1g63nssxrgqgzw8qjz8202qpwhps8fbck6pn77j2wsc82dm73y7v"; depends=[]; }; - merDeriv = derive2 { name="merDeriv"; version="0.1-3"; sha256="0kgmv220nlg0r31bwg5qxkc8ybngg4c5q16bkknzf4khmbx19iwm"; depends=[lme4 Matrix nonnest2 sandwich]; }; + merDeriv = derive2 { name="merDeriv"; version="0.1-4"; sha256="1gkxc2bf4fx3vbf1nq1g713hhhx7031wchxmgr2ydwfrighwf8qg"; depends=[lme4 Matrix nonnest2 sandwich]; }; merTools = derive2 { name="merTools"; version="0.3.0"; sha256="1kc32zm1wmmivf1qfs6vi7y8kwibj6sr540is82dyh7xdmbc5mx3"; depends=[abind arm blme broom dplyr DT ggplot2 lme4 mvtnorm shiny]; }; merror = derive2 { name="merror"; version="2.0.2"; sha256="13d9r5r83zai8jnzxaz1ak40876aw20zbpr244gs55rvj5j7f87q"; depends=[]; }; meshsimp = derive2 { name="meshsimp"; version="0.1.1"; sha256="0cdgq4vfjf0h6l55v687k5xs0nwmlpqmw424xgnsfnwxw5ljcvb1"; depends=[plot3D Rcpp RcppEigen]; }; metRology = derive2 { name="metRology"; version="0.9-26-2"; sha256="1i9lxgphn8nmkcp2zgjs6ylbccmfgv9lfch00xmx1xfb538jz82q"; depends=[MASS numDeriv robustbase]; }; - metScanR = derive2 { name="metScanR"; version="1.1.1"; sha256="0cl3vfh8hcx230xpv5611liwk7jr49a2akz18f641yd04akk7f19"; depends=[geosphere leaflet plyr RColorBrewer RCurl]; }; - meta = derive2 { name="meta"; version="4.9-0"; sha256="012yhxbn114q8bf75mm8ap11q33a5azzkh1b811saq77p1f6lwgq"; depends=[]; }; + metScanR = derive2 { name="metScanR"; version="1.2.0"; sha256="1x32f23w5f3s7sc5gbbqzq9s83clarskj9vpnfnwryrx87dg1jjc"; depends=[geosphere leaflet plyr RColorBrewer RCurl]; }; + meta = derive2 { name="meta"; version="4.9-1"; sha256="1nv8yzcwamflcii5x6l3h5p1q7q4xrd74v40njnpgmhkn4vrkyax"; depends=[]; }; meta4diag = derive2 { name="meta4diag"; version="2.0.7"; sha256="024rxnqzw9xydy0mm1w38s739qgkzjsifq23bwpvkwj0x0jnwry0"; depends=[caTools shiny shinyBS sp]; }; metaBMA = derive2 { name="metaBMA"; version="0.3.9"; sha256="14c3q4aw89r3apzm0ils886xsc6agbn8d2wgp47dc2ddwf5n8p58"; depends=[coda LaplacesDemon logspline mvtnorm runjags]; }; metaLik = derive2 { name="metaLik"; version="0.42.0"; sha256="1rk5mwgmgnqq2hrzbh936hzw3aa815l12r1a1qywap5ggmmyhszl"; depends=[]; }; @@ -8171,6 +8327,7 @@ in with self; { metaMix = derive2 { name="metaMix"; version="0.2"; sha256="0xlsdgincxwjzyr4i8qfmfw2wvgf41qbmyhf2rxcbarf7rmwhmqf"; depends=[data_table ggplot2 gtools Matrix Rmpi]; }; metaRNASeq = derive2 { name="metaRNASeq"; version="1.0.2"; sha256="1xz7df7ypq4326yg429pgxd6aldp14c3h3qi20j5nqr5xgsdgzqa"; depends=[]; }; metaSEM = derive2 { name="metaSEM"; version="1.0.0"; sha256="1i77w7b6xbi8p43s9vicj121kz7f3qp1zhqwy6qc5xcj9qaqjklp"; depends=[ellipse lavaan MASS Matrix mvtnorm numDeriv OpenMx]; }; + metaboGSE = derive2 { name="metaboGSE"; version="1.0.2"; sha256="1nfcjplry2ba98yi3flk6zcvlys57gri3582mylh543xkcvlrifz"; depends=[AnnotationDbi ape Matrix sybil topGO]; }; metabolomics = derive2 { name="metabolomics"; version="0.1.4"; sha256="0m5d2784mkpkkg396y3vpvf38vmba5kvxarilq3zf818vjs4pnax"; depends=[crmn gplots limma]; }; metacart = derive2 { name="metacart"; version="1.0-0"; sha256="13dp9yz6yjd2jc7lf3w3ac3vk69ry7zygf6xnvzrcwsdmxd0258n"; depends=[ggplot2 gridExtra rpart rpart_plot]; }; metacoder = derive2 { name="metacoder"; version="0.2.0"; sha256="0dyd16yy7adpyksfpg6d414s1l6nls5hv1k938mn7fji1px14sgj"; depends=[ape biomformat cowplot dplyr GA ggfittext ggplot2 ggrepel igraph lazyeval magrittr phylotate RColorBrewer Rcpp RCurl readr reshape reshape2 rlang scales seqinr stringr taxa taxize traits vegan zoo]; }; @@ -8185,18 +8342,18 @@ in with self; { metaheur = derive2 { name="metaheur"; version="0.2.0"; sha256="1rr5mjx3v87alj7cl9hxldvhhbpkz1fzmymmkqv0hs65pny6gbqw"; depends=[doParallel foreach ggplot2 preprocomb reshape2]; }; metaheuristicOpt = derive2 { name="metaheuristicOpt"; version="1.0.0"; sha256="1wzy5dnmrdfdj1386snjyisrbzbq8v4qsnq57l3wvkg1pgnz1vh2"; depends=[]; }; metamisc = derive2 { name="metamisc"; version="0.1.8"; sha256="06dzjnrbxqkb0d0zcdxg8fyadsbq0f0fca4xifjz16yjz1047n5k"; depends=[ellipse ggplot2 lme4 metafor mvtnorm plyr]; }; - metansue = derive2 { name="metansue"; version="2.0"; sha256="102cddahlzm0b76y6pr7jxqxf28j6y3hsjd17fpnyvrwnzhqbz5m"; depends=[]; }; + metansue = derive2 { name="metansue"; version="2.1"; sha256="0mklpnb9m0pynz3x0fin003zz0n1v6i0fdcahny70y1yxiy5agcs"; depends=[]; }; metap = derive2 { name="metap"; version="0.8"; sha256="06ny9zkilawdy0s8yiwhnygs3yppw89bbyf76zgdavykbzscz5lh"; depends=[lattice]; }; - metaplot = derive2 { name="metaplot"; version="0.4.6"; sha256="1qh7v7s8jrdpjzyw41zjlwv8dlq7k49zi2h5slk0jfa9jd635w4x"; depends=[dplyr encode lattice magrittr rlang tidyr]; }; + metaplot = derive2 { name="metaplot"; version="0.4.9"; sha256="1nbnyh03n1kkkl4v80nbbbnkrzs1a5ri210x9q4m2v87jrcikllw"; depends=[dplyr encode lattice magrittr rlang tidyr]; }; metaplotr = derive2 { name="metaplotr"; version="0.0.3"; sha256="01iala6cxsxv30fnlh80md5mpy3ksd2piw90zcls8f68g1c6v1jy"; depends=[ggplot2 gridExtra]; }; - metaplus = derive2 { name="metaplus"; version="0.7-10"; sha256="066w0klii6a82mq4kdzbx3ccshmsxikym9x8w288pjw92r2z2cfn"; depends=[bbmle boot fastGHQuad lme4 MASS metafor numDeriv]; }; + metaplus = derive2 { name="metaplus"; version="0.7-11"; sha256="05pkgw0zlq3q9mvdw2yxz9mxzqwq3c8q6cwvh87cigw1pf8y9an7"; depends=[bbmle boot fastGHQuad lme4 MASS metafor numDeriv]; }; metasens = derive2 { name="metasens"; version="0.3-2"; sha256="1wxp6gzq3wmas8hm8vqxclawxkc4p8dw2apzmg0nciqvas6dzic8"; depends=[meta]; }; metatest = derive2 { name="metatest"; version="1.0-4"; sha256="0bz6gg2n4ffkr144jxk27y24xpqhp8awr09wkaijmv8902qx6qah"; depends=[]; }; metavcov = derive2 { name="metavcov"; version="1.1"; sha256="1x87knvypkfg0x223aiak7fy7zdlfn74crmvnqzhxf2vmxljnvnh"; depends=[corpcor]; }; - metaviz = derive2 { name="metaviz"; version="0.1.1"; sha256="1myhh16a7mad4gidl2xhnfv940gjqhbl8rlg6vrwvawgaiwigbxp"; depends=[ggplot2 metafor nullabor plyr RColorBrewer]; }; + metaviz = derive2 { name="metaviz"; version="0.2.0"; sha256="1a4qwhg3lb5jxnddmi7zf2sc2yjzjap3rh6hfm3965bydpf1q57c"; depends=[dplyr ggplot2 ggpubr gridExtra metafor nullabor RColorBrewer]; }; meteR = derive2 { name="meteR"; version="1.2"; sha256="02637d3dnfq0jv9d74y99x7ms89y3jcmkpazc44g44sa7jx4i510"; depends=[distr nleqslv]; }; meteo = derive2 { name="meteo"; version="0.1-5"; sha256="0n37plka9vsxwd03lca3h6m8dcz3f1bi46jn3bz7vyilnkq9hcdk"; depends=[gstat plyr raster rgdal snowfall sp spacetime]; }; - meteoForecast = derive2 { name="meteoForecast"; version="0.51"; sha256="1k5m561b6hpqvzrg5l16523ig1rxcsi4s172jmya039cwyk8mqfp"; depends=[ncdf4 raster sp XML zoo]; }; + meteoForecast = derive2 { name="meteoForecast"; version="0.52"; sha256="1v9p2l45jzzim10pmy4y1hzc68sxawd996sri6dw7hnalfqfiyxj"; depends=[ncdf4 raster sp XML zoo]; }; meteogRam = derive2 { name="meteogRam"; version="1.0"; sha256="167gyxjnl4dyfqs3znv8sdpkvpqdxzdqi1g730s30gycrm9snap9"; depends=[ggplot2 RadioSonde]; }; meteoland = derive2 { name="meteoland"; version="0.7.1"; sha256="1nsn4z3gbkcdhgyn13fjcpsyb0lb85kiyy6fhirlnw63dwr56a2l"; depends=[curl ncdf4 ncdf4_helpers qmap Rcpp rgdal sp spdep]; }; metricTester = derive2 { name="metricTester"; version="1.3.4"; sha256="1z4z8km1jr0azh2zxp1sffm5picc9y6w9yn68zr1axli0l64y3a0"; depends=[ape doParallel dplyr foreach geiger MASS picante plotrix spacodiR]; }; @@ -8204,12 +8361,13 @@ in with self; { mets = derive2 { name="mets"; version="1.2.3"; sha256="1f1mqpzpvh5vb8b8w72q13jhk978bcvwipf4bx3kzzgsf6yfxk5s"; depends=[lava numDeriv Rcpp RcppArmadillo survival timereg]; }; mev = derive2 { name="mev"; version="1.11"; sha256="0iqcslnchap8zh4s3bllqqb8z0klpzg2pn8ays1xk66lj5ywl390"; depends=[boot evd gmm ismev nleqslv nloptr numDeriv Rcpp RcppArmadillo revdbayes rootSolve]; }; mewAvg = derive2 { name="mewAvg"; version="0.3.0"; sha256="16gc78ccjffp9qgc7rs622jql54ij83ygvph3hz19wpk22m96glm"; depends=[]; }; - mexhaz = derive2 { name="mexhaz"; version="1.4"; sha256="1c3n8g93pb38dw45ls6wh81giqw7zkksh2rmpbw46ink23ks12ij"; depends=[MASS numDeriv statmod survival]; }; + mexhaz = derive2 { name="mexhaz"; version="1.5"; sha256="0my53dg321xfbbkxawxcggnh5gw9qkliji5gsdb8m1fi37djd67w"; depends=[MASS numDeriv statmod survival]; }; mfGARCH = derive2 { name="mfGARCH"; version="0.1.2"; sha256="08gkba5v8l0867rrxakn7js11v1yj7qp9vmzbjmri9hjcm02s44a"; depends=[numDeriv Rcpp zoo]; }; mfe = derive2 { name="mfe"; version="0.1.0"; sha256="06x6csf3pr1vdmmimg6f7iffrivj8wcdfafvld7nrzbkl09cbfbn"; depends=[C50 class e1071 infotheo MASS rpart]; }; mfp = derive2 { name="mfp"; version="1.5.2"; sha256="1i90ggbyk2p1ym7xvbf4rhyl51kmfp6ibc1dnmphgw15wy56y97a"; depends=[survival]; }; mfx = derive2 { name="mfx"; version="1.1"; sha256="1zhpk38k7vdq0pyqi1s858ns19qycs3nznpa00yv8sz9n798wnn5"; depends=[betareg lmtest MASS sandwich]; }; mgarchBEKK = derive2 { name="mgarchBEKK"; version="0.0.2"; sha256="1k4c34srnckbh5kchzmm44l91ma9sw0gi4y225igs3cl79212q9c"; depends=[mvtnorm tseries]; }; + mgc = derive2 { name="mgc"; version="1.0.1"; sha256="0bdj890v2rinsddny8kwa48cgqh9qlzfd7k5s4i9mg40ajr0f291"; depends=[MASS SDMTools]; }; mgcv = derive2 { name="mgcv"; version="1.8-23"; sha256="1lsrhf1yzn25pfn3f5x8yxjqnfryim4jx3iqd7ah8aalh5asqwbp"; depends=[Matrix nlme]; }; mglR = derive2 { name="mglR"; version="0.1.0"; sha256="1b7nd913d4a1szgw2qnhlnjqhfxr95xag6jwjcb2wnnxd12lib7n"; depends=[biomaRt dplyr gdata ggplot2 gplots magrittr stringr]; }; mglmn = derive2 { name="mglmn"; version="0.0.2"; sha256="1ijkmr85s4yya0hfwcyqqskbprnkcbq8sc9c889i0gy0543fgqz4"; depends=[mvabund snowfall]; }; @@ -8224,7 +8382,7 @@ in with self; { mhurdle = derive2 { name="mhurdle"; version="1.1-7"; sha256="06ph0vbm7yk5388v2aww6nmi2rhjhfjj1hl506a41m5k6hf746pk"; depends=[Formula maxLik survival texreg truncreg]; }; mi = derive2 { name="mi"; version="1.0"; sha256="1h47k5mpbvhid83277dvvj2di493bgzz9iarpyv3r30y219l7x1l"; depends=[arm Matrix]; }; miCoPTCM = derive2 { name="miCoPTCM"; version="1.0"; sha256="1lmf6zahfp59ylhdp2cbr7y3vayhim72zazimg4qfld4r9d6kygc"; depends=[distr MASS nleqslv survival]; }; - miLineage = derive2 { name="miLineage"; version="2.0"; sha256="091wf4kwakdr91xkyg038f0vj941gvziy7yc4l8cylcjbr647qzz"; depends=[data_table geepack MASS]; }; + miLineage = derive2 { name="miLineage"; version="2.1"; sha256="0660vk44ywmj0q2cw7pa2z1r039ncw693dnz7zlgc0ipwak3b0ry"; depends=[data_table geepack MASS]; }; miRNAss = derive2 { name="miRNAss"; version="1.4"; sha256="0p852vyn44g84i4hzm7b02m5cxyqajnczx0s9x9373rn7fi6r98c"; depends=[CORElearn Matrix Rcpp RSpectra]; }; miRada = derive2 { name="miRada"; version="1.13.8-8"; sha256="1m6rm65pv4r16r0s5ih69nr3v2rnpsvpdpk07pi7k4f7v9wck71v"; depends=[]; }; miRtest = derive2 { name="miRtest"; version="1.8"; sha256="0i66s1sz7vf8p8ihfrxmag7wbkw8mlkldcp1w2figlzyhs74c85p"; depends=[corpcor GlobalAncova globaltest limma MASS RepeatedHighDim]; }; @@ -8235,7 +8393,9 @@ in with self; { micEconSNQP = derive2 { name="micEconSNQP"; version="0.6-6"; sha256="1n3pxapc90iz1w3plaqflayd0b1jqd65yw5nbbm9xz0ih132dby9"; depends=[MASS miscTools systemfit]; }; mice = derive2 { name="mice"; version="2.46.0"; sha256="1gjvlk67zvgipfczsca8zqk97vg3sivv82hblsdwp14s7smhjcax"; depends=[lattice MASS nnet Rcpp rpart survival]; }; miceExt = derive2 { name="miceExt"; version="1.1.0"; sha256="07xj9f5w0kh4d1yj8mx1jydvhd0vwpvvrb6h67xz5gb1ban4k6c6"; depends=[mice RANN RANN_L1]; }; - miceadds = derive2 { name="miceadds"; version="2.9-15"; sha256="03jvs643cq23y5fj1ffilqr9bi7g4blk7c0bh7nvrpjx5sscqjck"; depends=[CDM lme4 MASS mice mitools mvtnorm Rcpp RcppArmadillo sirt TAM]; }; + miceFast = derive2 { name="miceFast"; version="0.1.0"; sha256="0089n3iagy81b6k9kdm6rh2k21vi55ly4a5d4b4snhf0rxrj7if8"; depends=[Rcpp RcppArmadillo]; }; + miceMNAR = derive2 { name="miceMNAR"; version="1.0"; sha256="1ns7i1p2nil2s7960hkfl557qipwshibsgpwyn58ss3ch1vr213g"; depends=[GJRM mice mvtnorm pbivnorm sampleSelection]; }; + miceadds = derive2 { name="miceadds"; version="2.10-14"; sha256="1cpwf8j1r5k5wb4cwjz0aqrsgb5x9nhdrxb22sfw3lrfc1x6i6ay"; depends=[CDM lme4 MASS mice mitools mvtnorm Rcpp RcppArmadillo sirt TAM]; }; micemd = derive2 { name="micemd"; version="1.2.0"; sha256="0l4qzhkxy43xwgfqp2c638fimixdrm94hgiabfds3sc1vbxma4r8"; depends=[abind digest jomo lme4 MASS Matrix mice mvmeta mvtnorm nlme]; }; micompr = derive2 { name="micompr"; version="1.1.0"; sha256="0qsxs35mmqx8hpszcb1z87xczh0vh0m0plqrj22af5mjjvif76n9"; depends=[]; }; microPop = derive2 { name="microPop"; version="1.3"; sha256="072qldi020m84j9crfvzvw2nzn5fagqmjjzb7g7i70zwqhl1kjsa"; depends=[deSolve]; }; @@ -8243,11 +8403,11 @@ in with self; { microbenchmark = derive2 { name="microbenchmark"; version="1.4-4"; sha256="0fv2w2vsiz18imf4115nd9chhmf275w2mb49pn7pkxi6z3bamc9c"; depends=[]; }; microclass = derive2 { name="microclass"; version="1.1"; sha256="0hl2s4135k187f0vqmj9snvmnwa5k9fg8ahivfs7ciknrcxfv3nk"; depends=[microcontax microseq Rcpp RcppEigen RcppParallel]; }; microcontax = derive2 { name="microcontax"; version="1.0"; sha256="0l5mfgda5xagjbh9bwv328k3m7kgggdm90rc8fr1ic59hvg56f3g"; depends=[microseq]; }; - microdemic = derive2 { name="microdemic"; version="0.2.0"; sha256="0g39j9bdfcv90332g9mp7khn15vqs0fzqx38criw4rxwi8dcd307"; depends=[crul data_table jsonlite tibble]; }; + microdemic = derive2 { name="microdemic"; version="0.3.0"; sha256="1hrl458jwrgjm7ds4scmicf39ssw1gbjxqaq95lhlwi9n0prd7jn"; depends=[crul data_table jsonlite tibble]; }; micromap = derive2 { name="micromap"; version="1.9.3"; sha256="1iciwy0kcg4qa0xc4gkqcilq33ac1s184vw13cbbkv0d1b5cgkgv"; depends=[ggplot2 maptools RColorBrewer rgdal sp]; }; micromapST = derive2 { name="micromapST"; version="1.1.1"; sha256="15ch132x3wnpf7rmy25nah7iyfxfk90p7lvavqjhrnavhjsfxbxx"; depends=[labeling RColorBrewer stringr]; }; micropan = derive2 { name="micropan"; version="1.2"; sha256="1b3hd5c6l9njns372zhqfryibrpqmrjxmc1p5gzdwm7450cs7qky"; depends=[BH igraph microseq Rcpp]; }; - microplot = derive2 { name="microplot"; version="1.0-25"; sha256="05b29l5s4g4yvprxsla28ykr4823lfhqlxm46p406p06r9wki3d7"; depends=[ggplot2 HH Hmisc htmltools lattice ReporteRs]; }; + microplot = derive2 { name="microplot"; version="1.0-38"; sha256="1jrm0rzq8xwrd3j1xwyy70071jk9cxqnqdbr3ljjn926yji10nfs"; depends=[cowplot ggplot2 HH Hmisc htmltools lattice ReporteRs]; }; microseq = derive2 { name="microseq"; version="1.2.2"; sha256="1h828iviraqrm43lhd0s3r7rdlakc6yfc6ngrcrkacpflfcmx3c7"; depends=[Rcpp]; }; midas = derive2 { name="midas"; version="1.0.1"; sha256="1alqxk23651jnkg0xn4rpvk71z5rhvx3y0wjrgkw2qw95s7jjn72"; depends=[shiny xml2]; }; midasr = derive2 { name="midasr"; version="0.6"; sha256="1sg6m36jg3b6znfg97ln5a6b4z36xkyjvgxk7wmqdq3h528z8613"; depends=[forecast MASS Matrix numDeriv optimx sandwich]; }; @@ -8273,10 +8433,10 @@ in with self; { minpack_lm = derive2 { name="minpack.lm"; version="1.2-1"; sha256="18ym2pdql5vzngc7q5gn66d153hrfrnd8ilv8yh6vd7j7sx7vjql"; depends=[]; }; minqa = derive2 { name="minqa"; version="1.2.4"; sha256="036drja6xz7awja9iwb76x91415p26fb0jmg7y7v0p65m6j978fg"; depends=[Rcpp]; }; minque = derive2 { name="minque"; version="1.1"; sha256="1hx4j38213hs8lssf9kj5s423imk7dzv60mdbzrpbp7la7jk2n57"; depends=[klaR Matrix]; }; - minval = derive2 { name="minval"; version="0.8"; sha256="05yqr2b5x17kpp4661x6p4pjszmvz2bad43z8m3qnvaa29zhd3n3"; depends=[]; }; + minval = derive2 { name="minval"; version="0.8-1"; sha256="11sr69hmqnh5g2zbfajy3wqc57759basky1w72dnrd38rq50llxs"; depends=[]; }; minxent = derive2 { name="minxent"; version="0.01"; sha256="1a0kak4ff1mnpvc9arr3sihp4adialnxxyaacdgmwpw61wgcir7h"; depends=[]; }; mipfp = derive2 { name="mipfp"; version="3.1"; sha256="18cfv8s38cd0g1wc5pry6a4m2ykqflkxhqbqnjbjvmr42bj3r6sp"; depends=[cmm numDeriv Rsolnp]; }; - mirt = derive2 { name="mirt"; version="1.26.3"; sha256="1jzvxcq7s179vi5cwrxkcqzffl2pyay5abnvlgazhabzf4150sml"; depends=[GPArotation lattice mgcv Rcpp RcppArmadillo vegan]; }; + mirt = derive2 { name="mirt"; version="1.27.1"; sha256="0344gqyx8x0q5smi8ifs6dw0hgqgw23mfgw8cb9gc8ky78zydjpp"; depends=[Deriv GPArotation lattice mgcv Rcpp RcppArmadillo vegan]; }; mirtCAT = derive2 { name="mirtCAT"; version="1.7"; sha256="038jp680hn17q8hcz346j4i0p913h7gbkqfswn0ygf1kwgsz1mpa"; depends=[lattice lpSolve markdown mirt pbapply Rcpp RcppArmadillo shiny]; }; misc3d = derive2 { name="misc3d"; version="0.8-4"; sha256="0qjzpw3h09qi2gfz52b7nhzd95p7yyxsd03fldc9wzzn6wi3vpkm"; depends=[]; }; miscF = derive2 { name="miscF"; version="0.1-4"; sha256="1kvkbvrmaqclwdfghkrsmnzb6xbi97icay2wwb7k5m34xhx4ha82"; depends=[MASS MCMCpack mvtnorm R2jags]; }; @@ -8286,11 +8446,12 @@ in with self; { miscor = derive2 { name="miscor"; version="0.1-1"; sha256="1vn0q0i2f1szjywddb7h7krpbf0qch6gmbzs03m4zb03xd70983b"; depends=[]; }; miscset = derive2 { name="miscset"; version="1.1.0"; sha256="1gwi7jnqdf2fa8yk8gmcc7dcv72bbdl7yj3yccj3r5jjk41vdp91"; depends=[data_table devtools ggplot2 gridExtra Rcpp xtable]; }; mise = derive2 { name="mise"; version="0.1.0"; sha256="1ydbm76w3y0p5h82shxjblwlzbrmzwx0bgq9w2axjwz2nx8jfw0a"; depends=[]; }; + mispr = derive2 { name="mispr"; version="1.0.0"; sha256="166piax3f7di8h0i07fbdx45lxz1p47j378v6yl6zdc3525adpjx"; depends=[e1071 MASS penalized]; }; misreport = derive2 { name="misreport"; version="0.1.1"; sha256="1f78zcw4cg51mjvflhwd64hip2gj8x9ng1mhh4w43yv3x8hmbd6h"; depends=[mvtnorm numDeriv VGAM]; }; missDeaths = derive2 { name="missDeaths"; version="2.5"; sha256="0pslssgf580zd0dd7m0l97bzgxnywj2qac0agxv6ih1a0xlxz874"; depends=[cmprsk MASS mitools Rcpp relsurv rms survival]; }; missForest = derive2 { name="missForest"; version="1.4"; sha256="0y02dhrbcx10hfkakg5ysr3kpyrsh2d9i5b0qzhj9x5x0d5q11gp"; depends=[foreach itertools randomForest]; }; missMDA = derive2 { name="missMDA"; version="1.11"; sha256="185ia5zg5gdrkjpj5sql46lz5svw77wjy9zplpqhrmgx43fv0w0i"; depends=[FactoMineR mice mvtnorm]; }; - missRanger = derive2 { name="missRanger"; version="1.0.0"; sha256="0advj6a57pj79xn43gxp7ll4b3y7hl5cvz5d7hw69f4yk4blwkjr"; depends=[FNN ranger]; }; + missRanger = derive2 { name="missRanger"; version="1.0.1"; sha256="0rab8b0fankymfhnz4f5g2hh2yq30h6cdblvz2d43i46d147js41"; depends=[FNN ranger]; }; mistat = derive2 { name="mistat"; version="1.0-5"; sha256="1vyx918b7iv1wcnk23bnlxljwy0hglpdx5drhrs5qcd45f6jrghc"; depends=[]; }; mistral = derive2 { name="mistral"; version="2.1.0"; sha256="1cr79p8q82lpj9d0y6q24xmfkxmnlqv8ivkd0baj7fxfb1nb8sak"; depends=[DiceKriging doParallel e1071 emoa foreach ggplot2 iterators Matrix mvtnorm quadprog]; }; mitml = derive2 { name="mitml"; version="0.3-5"; sha256="1s888r9y2ri39b48h1iypps6lddqkqv3g31l2sjmi2pvyccfpkwb"; depends=[haven jomo pan]; }; @@ -8306,13 +8467,13 @@ in with self; { mixcat = derive2 { name="mixcat"; version="1.0-3"; sha256="0xszngygd3yj61pvv6jrrb5j0sxgpxzhlic69xrd5mv5iyw0cmxd"; depends=[statmod]; }; mixdist = derive2 { name="mixdist"; version="0.5-4"; sha256="100i9mb930mzvdha31m1srylmpa64wxyjv6pkw1g5lhm1hsclwm3"; depends=[]; }; mixedMem = derive2 { name="mixedMem"; version="1.1.0"; sha256="0j8w3qfhanyrkkxipdxfdajv15qba8r2rm06iiv3kywficzgkxgv"; depends=[BH gtools Rcpp RcppArmadillo]; }; - mixedsde = derive2 { name="mixedsde"; version="3.0"; sha256="1libm4pyzfqi11hcx823qdhgshdsy84dzv7jhz3b89w9bkla5l17"; depends=[MASS moments plot3D sde]; }; + mixedsde = derive2 { name="mixedsde"; version="4.0"; sha256="1hryscff4i4ayqxv9imnx4g56497s1s95fzqv8wkwcpfcqi20bqf"; depends=[MASS moments plot3D sde]; }; mixexp = derive2 { name="mixexp"; version="1.2.5"; sha256="0nbf10xhrr51rb1b2apcj4p3ci8xbi7flgz500ar3mxh8h8l74sq"; depends=[daewr gdata lattice]; }; mixlink = derive2 { name="mixlink"; version="0.1.5"; sha256="0ywgrcplhspc0x5fniw52xqz20y7j9mwgy4ky8lv3vii659mr52m"; depends=[mvtnorm numDeriv Rcpp RcppGSL]; }; mixlm = derive2 { name="mixlm"; version="1.2.3"; sha256="0i7nrn31yaicdpwfssnid1x8w51iv17lcl96zfr1pgrf97d7gkqd"; depends=[car leaps multcomp pls pracma]; }; mixor = derive2 { name="mixor"; version="1.0.3"; sha256="1qnrfd0hggad81rn8ryfm9l0cpd59ifj9sxc1bav35bma535azdv"; depends=[]; }; mixpack = derive2 { name="mixpack"; version="0.3.6"; sha256="0q19mal86qlriwilabgy3sn33iymi5hl3wa33kvb8cd1dgdmjr7a"; depends=[mvtnorm Rcpp RcppArmadillo]; }; - mixreg = derive2 { name="mixreg"; version="0.0-5"; sha256="0wsb1z98ymhshw9nhsvlszsanflxv3alwpdsw8lr3v62bkwka8zr"; depends=[]; }; + mixreg = derive2 { name="mixreg"; version="0.0-6"; sha256="04g863yxrlj0wqsmzzxph5110g3gjk094r59zzk0b9r89m8vhpsl"; depends=[]; }; mixsep = derive2 { name="mixsep"; version="0.2.1-2"; sha256="1ywwag02wbx3pkd7h0j9aab44bdmwsaaz0p2pcqn1fs3cpw35wa2"; depends=[MASS RODBC tcltk2]; }; mixsmsn = derive2 { name="mixsmsn"; version="1.1-4"; sha256="1y15qjh6qzx3aqlv4pndmgk2mgkqpyxcd76ykn31qd8mwzddci9d"; depends=[mvtnorm]; }; mixtNB = derive2 { name="mixtNB"; version="1.0"; sha256="0lqbm1yl54zfs0xcmf3f2vcg78rsqyzlgvpydhmhg7x6dkissb22"; depends=[]; }; @@ -8323,34 +8484,40 @@ in with self; { mizer = derive2 { name="mizer"; version="0.4"; sha256="0ir6hx3fb4lkfgg7dln96fd50fr4jdrxbqp70461fsyzi3lxn6nv"; depends=[ggplot2 plyr Rcpp reshape2]; }; mkde = derive2 { name="mkde"; version="0.1"; sha256="04v84arpnmjrkk88ffphnhkz32x7y0dypk75jfmbbgcgv59xlglv"; depends=[raster Rcpp sp]; }; mkin = derive2 { name="mkin"; version="0.9.47.1"; sha256="1cz6f9122im594dvqdmdm9yjlnmwzrx2ka63dgj0zf1ysqzf0872"; depends=[deSolve FME inline minpack_lm R6 rootSolve]; }; + mknapsack = derive2 { name="mknapsack"; version="0.1.0"; sha256="1kzmx7d512681a4hjirfgcd7a8rvndb4da66p16gms5nnxzsby9c"; depends=[assertthat data_table lpSolve]; }; mkssd = derive2 { name="mkssd"; version="1.1"; sha256="1qqzy6fn6sc3lxahc19hzzf1hzxsyvxqi7npynw0vkknlrvh2ijp"; depends=[]; }; mlDNA = derive2 { name="mlDNA"; version="1.1"; sha256="0d9lydiwar98hin26slnym4svn0g1xmyn212vvzsx9lzlvs5a9k4"; depends=[e1071 igraph pROC randomForest ROCR rsgcc snowfall]; }; mlPhaser = derive2 { name="mlPhaser"; version="0.01"; sha256="1s2mqlnbcjdkx0ghvr2sw9rzggqa4jy2vzi9vbyqkh6795lgck6n"; depends=[]; }; mlVAR = derive2 { name="mlVAR"; version="0.4"; sha256="08iaq6wq0ngd60nhmlj8c0x8r1fal1zfv2zpd6ll54szcvdbxahr"; depends=[abind arm clusterGeneration corpcor dplyr lme4 MplusAutomation mvtnorm plyr qgraph]; }; mlapi = derive2 { name="mlapi"; version="0.1.0"; sha256="023vk5bp8cjcq88sapkl87kdxr92bay1dyxl6xirnyj699pyj51k"; depends=[Matrix R6]; }; mlbench = derive2 { name="mlbench"; version="2.1-1"; sha256="1rp035qxfgh5ail92zjh9jh57dj0b8babw3wsg29v8ricpal30bl"; depends=[]; }; - mlbgameday = derive2 { name="mlbgameday"; version="0.1.0"; sha256="1d339hr7iys8qlw6m0zbvpcw4b1k04504k6l1xz63ijdgpyr593y"; depends=[DBI doParallel dplyr foreach iterators magrittr purrr stringr xml2]; }; + mlbgameday = derive2 { name="mlbgameday"; version="0.1.1"; sha256="01jb2fiv847jfdl18g2b3xlihfbry2j2r9ajmw8gd82052ayyk1j"; depends=[DBI doParallel dplyr foreach iterators magrittr purrr stringr tidyr xml2]; }; + mlbstats = derive2 { name="mlbstats"; version="0.1.0"; sha256="1pfsc1pc5986gykx8l6afahszhaj4940l8g33fdxyy7194kbcz70"; depends=[]; }; mldr = derive2 { name="mldr"; version="0.4.0"; sha256="1nx21yyxfaiyxpbjkc5sif6pis5v2skisxcxdqk4479h54qzwlj3"; depends=[circlize shiny XML]; }; mldr_datasets = derive2 { name="mldr.datasets"; version="0.4.0"; sha256="0kbfaf39vkhvscw47bkx2mmc6cmgwz1cys62iiw3yb6kvkzddr3s"; depends=[]; }; mle_tools = derive2 { name="mle.tools"; version="1.0.0"; sha256="02yndj1if31zr9y805mq5km5n8jz4w9jz1bmaz9nnqsqimrnigrb"; depends=[]; }; mlearning = derive2 { name="mlearning"; version="1.0-0"; sha256="0r8xfaxw83s2r27b8x5qd0k4r5ayxpkafzn9b1a0jvsr87i6520r"; depends=[class e1071 ipred MASS nnet randomForest]; }; - mlegp = derive2 { name="mlegp"; version="3.1.6"; sha256="12w6gw1g1xn3i42pgall09w5im8gf84h28d3fa9m3fhkifkid2db"; depends=[]; }; + mlegp = derive2 { name="mlegp"; version="3.1.7"; sha256="1q0mxvr23qcxvf8k2cgs4m8yfp1gbkmprp964w8viy30japmx16l"; depends=[]; }; mleur = derive2 { name="mleur"; version="1.0-6"; sha256="0mddphq3b6y2jaafaa9y41842kcaqdl3dh7j4pva55q2vcjcclj7"; depends=[fGarch lattice stabledist urca]; }; + mlf = derive2 { name="mlf"; version="1.2"; sha256="1k2vplsqnccf5ymf50hgl4ly3np7n87ympd3aajpfwcn3jljbxkf"; depends=[]; }; mlgt = derive2 { name="mlgt"; version="0.16"; sha256="1nvdq6mvgr39ikkf73aggsb6pmbw132injj8fdkr8hgcmwm6lgd9"; depends=[seqinr]; }; mlica2 = derive2 { name="mlica2"; version="2.1"; sha256="0c3m1zd9x99n6lw12hfzmd59355z51xa8rhg1h7qwfn9p86r826f"; depends=[]; }; mljar = derive2 { name="mljar"; version="0.1.1"; sha256="1mw45aqjwklsnrfwf8656jf30miyrlxpz87z97nkv9i135yhwfx3"; depends=[httr jsonlite readr]; }; mlmRev = derive2 { name="mlmRev"; version="1.0-6"; sha256="0mvmahnbbp478xwldj4wlsjib4v4afhs07643gxgcqpi56zbd5h7"; depends=[lme4]; }; mlma = derive2 { name="mlma"; version="4.0-1"; sha256="0pk2h4m74r95dfkqzliixi6z1rwdfc6gbz8c3162y22m919f00vc"; depends=[car gplots lme4]; }; mlmc = derive2 { name="mlmc"; version="1.0.0"; sha256="01h7w0ajyg3bccynlpbi3yjpy089wczbfbajpg6yw5v4dppw7k7a"; depends=[ggplot2 Rcpp]; }; + mlmm_gwas = derive2 { name="mlmm.gwas"; version="1.0.2"; sha256="1zxmiqsn3rcs0a6w785smx8ifa10083vakawy3c59pa8zigii1xp"; depends=[coxme Matrix multcomp multcompView sommer]; }; mlmmm = derive2 { name="mlmmm"; version="0.3-1.2"; sha256="1m5ziiqs3ll1xjm1yf7x4sdc910jypn3kjnbadf95xxkvqmfrsqq"; depends=[]; }; mlogit = derive2 { name="mlogit"; version="0.2-4"; sha256="15ndly7i56k8blgvpn15ixxnqx9yvbci7n3mb3hm9mnrxwh5v7sx"; depends=[Formula lmtest MASS maxLik statmod zoo]; }; mlogitBMA = derive2 { name="mlogitBMA"; version="0.1-6"; sha256="1wl8ljh6rr1wx7dxmd1rq5wjbpz3426z8dpg7pkf1x9wr94a2q25"; depends=[abind BMA maxLik]; }; - mlr = derive2 { name="mlr"; version="2.12"; sha256="0qf1yl487jmg7w85vjd7wdky8agysi1xlvl20dnqrn2cms4h1q6g"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival XML]; }; + mlr = derive2 { name="mlr"; version="2.12.1"; sha256="0b68pgx55f19i3pnci1n87cq2a7kfs6s2248zs1vg4xl5sw9ifww"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival XML]; }; + mlrCPO = derive2 { name="mlrCPO"; version="0.3.2"; sha256="1wnh0ljh7739qcrgkgnf40xwkih0bmvpvykaaw51rascy63mf003"; depends=[backports BBmisc checkmate mlr ParamHelpers stringi]; }; mlrMBO = derive2 { name="mlrMBO"; version="1.1.1"; sha256="1r6p5ph7nyqs6cqqsg04mass1zppys75n8448lv6iadlm499jzg8"; depends=[backports BBmisc checkmate data_table lhs mlr parallelMap ParamHelpers smoof]; }; mlsjunkgen = derive2 { name="mlsjunkgen"; version="0.1.1"; sha256="109ag52x4y3rzx8yccilrnl24mz4ximzx6v4lrbak7dpiclqrw7a"; depends=[]; }; mlt = derive2 { name="mlt"; version="1.0-0"; sha256="0vbja0sxjg3a5gpa8wwnj1fvr8kkvkpzhim6lssvyy7kcb44fcya"; depends=[alabama basefun BB coneproj numDeriv sandwich survival variables]; }; mlt_docreg = derive2 { name="mlt.docreg"; version="1.0-0"; sha256="1shhf5pk90cfia51a0qnbg8pvvv5n86d3mjy961rjs1wj30vj3yd"; depends=[mlt numDeriv]; }; mltools = derive2 { name="mltools"; version="0.3.4"; sha256="18dxhims684a6fk44nrzdnry8dpxs69wim8kd7zamp8zdhy38kyy"; depends=[data_table Matrix]; }; + mlvocab = derive2 { name="mlvocab"; version="0.0.1"; sha256="0lv9aqrwm00jdklig80yi5lxj87sh6ysg7qkg0kf1nv05lkvrpb0"; depends=[digest Matrix Rcpp sparsepp]; }; mlxR = derive2 { name="mlxR"; version="3.3.0"; sha256="0qbhmxmsyqfc2csk96qwizpjj7yk35r85rr5xaqkyr72mjn2m3gh"; depends=[ggplot2 Rcpp XML]; }; mma = derive2 { name="mma"; version="6.1-0"; sha256="1rrnm7szlaly8klqgi8wdh5qvfx4kx5bkl1q2y9y6zjpxmb4zvi6"; depends=[car doParallel foreach gbm gplots plotrix survival]; }; mmand = derive2 { name="mmand"; version="1.5.3"; sha256="1n0h7nia9jjc11g8417nfd3wsg4m3bmblm9bsjd0b52vqxhpxmzh"; depends=[Rcpp]; }; @@ -8416,11 +8583,12 @@ in with self; { mondate = derive2 { name="mondate"; version="0.10.01.02"; sha256="18v15y7fkll47q6kg7xzmj5777bz0yw4c7qfiw2bjp0f3b11qrd2"; depends=[]; }; mongolite = derive2 { name="mongolite"; version="1.5"; sha256="06qry561kdg4lxvdayghmhmgb94sqy16gxjp081xnmya0vqf9wjy"; depends=[jsonlite openssl]; }; monitoR = derive2 { name="monitoR"; version="1.0.7"; sha256="1h1g0m1j13mz37xxwck4s7a0bfqvi0nrzfw60j7bkzaah8zxcc9n"; depends=[tuneR]; }; - monkeylearn = derive2 { name="monkeylearn"; version="0.1.3"; sha256="1sq30pkqd8q4dck4ck1lfdfyiir5p4c87i3xnvx7w9spx3c6pxpd"; depends=[digest httr jsonlite tibble]; }; + monkeylearn = derive2 { name="monkeylearn"; version="0.2.0"; sha256="18lpfs64h0hy4vkdjlnmxwgagvf54kn8a1c866vv00ckyp85fvn2"; depends=[cowsay digest dplyr httr jsonlite magrittr purrr ratelimitr tibble tidyr]; }; monmlp = derive2 { name="monmlp"; version="1.1.5"; sha256="19cx60csm8mnf6ksg64vlhi8wi1c7bmv9l55y9zmaljblr0kmzxf"; depends=[optimx]; }; monographaR = derive2 { name="monographaR"; version="1.2.0"; sha256="0sis2kw07ifq54w6p56zspmlnvxvq6ajb0sdvc9fk480sfxg9806"; depends=[circular maptools png raster rmarkdown sp]; }; monomvn = derive2 { name="monomvn"; version="1.9-7"; sha256="1bz967sl6ji84x9v0fypjn75d39naaqgvw31n9lgcd5lyj39hbsk"; depends=[lars MASS mvtnorm pls quadprog]; }; monoreg = derive2 { name="monoreg"; version="1.2"; sha256="16n622j1j998a5fhn1c1qbzk5bfa5h09d95ry89gsd00p40hqg0a"; depends=[]; }; + monotonicity = derive2 { name="monotonicity"; version="1.0"; sha256="0xpsn57lixw6pzf7qyp2x6az7vwbfw9bsd0yz93710pyyhkzr94b"; depends=[lmtest MASS sandwich]; }; monreg = derive2 { name="monreg"; version="0.1.3"; sha256="08rcg2xffa61cgqy8g98b0f7jqhd4yp8nx6g4bq3g722aqx4nfg3"; depends=[]; }; moonBook = derive2 { name="moonBook"; version="0.1.3"; sha256="1wy8qwzymh482gfb4v9v74k666mq8dz2yird7gz43l3hps22kfgb"; depends=[nortest survival]; }; moonsun = derive2 { name="moonsun"; version="0.1.3"; sha256="1y8mwxmcy4iz444c2fayyi4i0jk1k561dp6cbjg2b3lmdml0whmi"; depends=[]; }; @@ -8434,6 +8602,7 @@ in with self; { mosaicCore = derive2 { name="mosaicCore"; version="0.4.2"; sha256="17yani6781znrrnrcji1q7h6y422bq443gzly0mm6yn8bj7v5qrc"; depends=[dplyr lazyeval MASS rlang tidyr]; }; mosaicData = derive2 { name="mosaicData"; version="0.16.0"; sha256="09kp3d3h3xmz9fnjaz9nr1jldjd93gyq5gq9sk2a2ymgnbmbc5wm"; depends=[]; }; mosaicModel = derive2 { name="mosaicModel"; version="0.3.0"; sha256="1gx4rzh0h922gyb50vz6q5vqqp5ry5hf2mq95948q2gcady91k5w"; depends=[caret dplyr ggformula ggplot2 knitr lazyeval MASS mosaicCore testthat tibble tidyr tidyverse]; }; + mosum = derive2 { name="mosum"; version="1.1"; sha256="0njpmb7mhgmaylfq1jgk198d6sc6r96kywbjpl2c465kvs8khc2f"; depends=[plot3D Rcpp zoo]; }; motmot_2_0 = derive2 { name="motmot.2.0"; version="1.1.2"; sha256="1hnpp2850yhvxki7pcwscg79knvxzs3gx4b19wza0wg3p02fvsb6"; depends=[ape caper coda MASS mvtnorm]; }; moult = derive2 { name="moult"; version="2.1.0"; sha256="0k0969fwy648x25xw42w5ncimyw2cbq305rzf4m77p3pf0k50m9b"; depends=[Formula Matrix]; }; mountainplot = derive2 { name="mountainplot"; version="1.2"; sha256="1bbgkps1yhfa0lmapqkhhl5mc63p0gzszxw2g910dbi1cjc0pphx"; depends=[lattice]; }; @@ -8461,7 +8630,7 @@ in with self; { mpt = derive2 { name="mpt"; version="0.5-4"; sha256="01akz72z6z5ybzika120v4v6ah13hfynh98rzbmqgbchijxbbkz6"; depends=[]; }; mptools = derive2 { name="mptools"; version="1.0.1"; sha256="1g4fbfwxv9hir0jn22nh9854blgkh0b5jan3lv0888izj4isa1hc"; depends=[animation lattice latticeExtra raster rasterVis sp viridis zoo]; }; mr_raps = derive2 { name="mr.raps"; version="0.2"; sha256="069vyvsdgc5m7n2fd0h7jrllz789zvsxka7h5wiy36dc7lagd6f8"; depends=[nortest]; }; - mrMLM = derive2 { name="mrMLM"; version="2.1"; sha256="0ip8xd2dj6d4hxq18pf4j6mk4yl00ajci72rr485wk94cr0zj5hy"; depends=[ggplot2 gWidgets gWidgetsRGtk2 lars MASS ncvreg openxlsx qqman RGtk2 RGtk2Extras stringr]; }; + mrMLM = derive2 { name="mrMLM"; version="3.0"; sha256="174d12dxrsndd8hkc4ivfa5wd7ixh3vkkvd1br5zm5rwxbq3c71l"; depends=[coin data_table doParallel foreach ggplot2 lars MASS ncvreg openxlsx qqman sampling stringr]; }; mra = derive2 { name="mra"; version="2.16.11"; sha256="0268msdy4cs2ifpagmwiabi6aav54ckn214ai18aqv2h97hmixw0"; depends=[]; }; mratios = derive2 { name="mratios"; version="1.3.17"; sha256="0a2pn4234ri5likaqbxgkw8xqmwchr6fak3nninral0yzd4rcal5"; depends=[mvtnorm]; }; mrbsizeR = derive2 { name="mrbsizeR"; version="1.0.1"; sha256="1gr8mx1byq8nw095yla4gn2ascgw4d90j7a3a3rzwfdavkjj7167"; depends=[fields maps]; }; @@ -8480,28 +8649,28 @@ in with self; { msaR = derive2 { name="msaR"; version="0.3.0"; sha256="0lj9yhsissr4rgavyhgdxi2nrkq2088darzraisx9jsirjr49jf8"; depends=[ape htmlwidgets]; }; msaenet = derive2 { name="msaenet"; version="2.8"; sha256="1293qdvn2qv3prnp4rwwndcjnzk49v565yfvzrvb9j7sqvjshf07"; depends=[foreach glmnet Matrix mvtnorm ncvreg survival]; }; msap = derive2 { name="msap"; version="1.1.8"; sha256="0z5lm782jjb9w1h5vgz8bmxjdcrq9zb3xp1w5cb479jjc7krlgg3"; depends=[ade4 ape]; }; - mschart = derive2 { name="mschart"; version="0.2.2"; sha256="0h6q7vzrhw9ccj3m037kw72ylqdsj7hlf0bqpghqpa3sv280ap2n"; depends=[cellranger data_table htmltools officer R6 writexl xml2]; }; + mschart = derive2 { name="mschart"; version="0.2.3"; sha256="0lq2hhbwy3hycbvzhrhny7jk5cc4iq89a4mff5q2jjfff13vmm6g"; depends=[cellranger data_table htmltools officer R6 writexl xml2]; }; mscstexta4r = derive2 { name="mscstexta4r"; version="0.1.2"; sha256="1hjcasmn33xav2mw085lcndv0432l6sz327aikf63491wj1sj7mw"; depends=[dplyr httr jsonlite pander stringi]; }; mscsweblm4r = derive2 { name="mscsweblm4r"; version="0.1.2"; sha256="031s00wpr9zfjpii56m67q1phn05vqlhb8cfzhyf6fbrxvpb8k7n"; depends=[httr jsonlite pander]; }; msda = derive2 { name="msda"; version="1.0.2"; sha256="05khpa5qasnngn6yvk87gv5262plqpw4knb6hzgy52w401k0y80r"; depends=[MASS Matrix]; }; msde = derive2 { name="msde"; version="1.0.3"; sha256="18l5ca4s1ryyb9i0zsb03klm53f25klwyg171dqkn5z4bqwznp2m"; depends=[Rcpp RcppProgress]; }; mseapca = derive2 { name="mseapca"; version="1.0"; sha256="115njdk8cv55zxd38hq9qaca686ykckni0f3xl8w3bn32gb5g9a7"; depends=[XML]; }; - msgl = derive2 { name="msgl"; version="2.3.6"; sha256="0qq9v8bb70iw67raygpzsg35nb2wdafp7rh7wzq42xd4gghi31ya"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; }; msgpack = derive2 { name="msgpack"; version="1.0"; sha256="1j1nnca9nm3l1r4wjjlb15zr8p6zw1lcgyj4383ndy156bbh1f5a"; depends=[]; }; msgpackR = derive2 { name="msgpackR"; version="1.1"; sha256="0a6vm4q1zfy8wlvhl9wfy09ig1iag9fvjasz5w9bll7idky4ldx5"; depends=[]; }; msgps = derive2 { name="msgps"; version="1.3"; sha256="0nvxy9a41z5d111gqr1gh521imm795l1li70g1mzrag1gpg810c5"; depends=[]; }; msgtools = derive2 { name="msgtools"; version="0.2.7"; sha256="1lk4r9gdhlfarl5z6a48aih682q7dvwa6lf31119lljpa5gmi92y"; depends=[devtools digest hunspell poio tibble]; }; + msigdbr = derive2 { name="msigdbr"; version="6.1.1"; sha256="0d8jxkfnlybs17s0qfxr1qcg6r4pp4q6c3srmm2r8zp7ln0qkj8j"; depends=[dplyr magrittr rlang tibble]; }; msir = derive2 { name="msir"; version="1.3.1"; sha256="1ipzgdffsqly3dp91pw7yp3h5cwn08l9qsj7cdmrykd42jc98950"; depends=[mclust rgl]; }; msltrend = derive2 { name="msltrend"; version="1.0"; sha256="1rwy77ijf3hzq2zp47cijwvqcq34rdlfxwhrd9l56bvmlmzr1dqx"; depends=[changepoint forecast plyr Rssa tseries zoo]; }; msm = derive2 { name="msm"; version="1.6.6"; sha256="06m7fflb6lgjfnj9v4wjc63x2as8jvc24qmz6jvgm9fw7hnm24px"; depends=[expm mvtnorm survival]; }; msma = derive2 { name="msma"; version="1.0"; sha256="1pq1m8hrvpfjh89wiz4f3jlzlp620clxzash5061zbhm0xjmxjpd"; depends=[mvtnorm]; }; - msme = derive2 { name="msme"; version="0.5.1"; sha256="1bkj10pgmv9q61384fwd2pxccclclc3knc5x212p42w4w49hnm1q"; depends=[lattice MASS]; }; + msme = derive2 { name="msme"; version="0.5.3"; sha256="0mq57zdas1s87nblnvbif9lisgahfhvmabglvp9imr1mvpwybpbh"; depends=[lattice MASS]; }; msmtools = derive2 { name="msmtools"; version="1.3"; sha256="0p7xpj78cjc1s015ma7vc38kqiy6wvpyixrdinx4ngig1pqfrq4p"; depends=[data_table msm survival]; }; msos = derive2 { name="msos"; version="1.1.0"; sha256="1dlqmjz5f8h71334kzdjbzvkn0dhysp7fb18g45qqs79cqpf1vzf"; depends=[mclust tree]; }; msr = derive2 { name="msr"; version="0.4.4"; sha256="1r7kzicyi380xylw4vl88918gqmvs875f3rssx57yg28swb93sv0"; depends=[colorspace e1071 glmnet RColorBrewer rgl]; }; mssqlR = derive2 { name="mssqlR"; version="1.0.0"; sha256="0qdnm7cx9cg14vfcnkmcjqr1jpxsw8xlrbnxldvzz44mzv2n878l"; depends=[magrittr RODBC]; }; - mstR = derive2 { name="mstR"; version="1.0"; sha256="0c189ia2mbhn183j0vbqxhwb20ww64fj11pq7p2cd55zfih4kp4b"; depends=[]; }; - mstate = derive2 { name="mstate"; version="0.2.10"; sha256="14namzs0s7v28xkj1pidccjpxg7570fdqhd64rihvyv1r7ybfyav"; depends=[RColorBrewer survival]; }; + mstR = derive2 { name="mstR"; version="1.2"; sha256="0v8cv9pswkvw0lva6jx5vavsb20dawgq83gn4rgydyhvigcl5szd"; depends=[]; }; + mstate = derive2 { name="mstate"; version="0.2.11"; sha256="13kw1n1p2f1f0k5hkcc4732wlhiy3csx8nx2ajrgw06svzksgh3y"; depends=[RColorBrewer survival]; }; mstherm = derive2 { name="mstherm"; version="0.4.7"; sha256="04jrp0w17svwmrvx356jmh04npbwhk9nvfy3r39vqr82yrvn6jip"; depends=[doParallel foreach nls2 plotrix RColorBrewer]; }; msu = derive2 { name="msu"; version="0.0.1"; sha256="1vhh9725dbywmzihnmsq1jircpn91r8227j2f76fvma9rwss90p7"; depends=[entropy]; }; mtconnectR = derive2 { name="mtconnectR"; version="1.1.0"; sha256="068rp4n2afl9qgqrnp0a4lmnq7mq9wrc2yi361bfvib96gzg1fdw"; depends=[data_table dplyr dtw ggplot2 magrittr plyr proxy stringr tidyr XML]; }; @@ -8511,8 +8680,9 @@ in with self; { muRL = derive2 { name="muRL"; version="0.1-11"; sha256="1pyspp1wpd80hcla1zwnl3misqggfk0ls54akwnx5aa617bibzz8"; depends=[maps stringr]; }; muStat = derive2 { name="muStat"; version="1.7.0"; sha256="18727xj9i9hcnpdfnl1b9wd6cp7wl1g74byqpda2gsrcardl57wz"; depends=[]; }; muckrock = derive2 { name="muckrock"; version="0.1.0"; sha256="16lm1iiaaws7clby7qgblqdiznw6abjjgvsxlfpza7l2xdvplxpg"; depends=[]; }; - mudata2 = derive2 { name="mudata2"; version="1.0.0"; sha256="0wlj9kra99ll3vmhkrw3gibricq3gwfl27iymnzrvv847lpvqjml"; depends=[dplyr ggplot2 hms jsonlite lubridate magrittr readr rlang stringr tibble tidyr tidyselect]; }; + mudata2 = derive2 { name="mudata2"; version="1.0.2"; sha256="14jd0fwc11a5640p0vr5dgfw7f1h7473ybqhalg20n7519jybfcb"; depends=[dplyr ggplot2 jsonlite lubridate magrittr readr rlang stringr tibble tidyr tidyselect]; }; mudfold = derive2 { name="mudfold"; version="1.1.0"; sha256="0mp25lad79dx2101srarx26my172jbkd6a0bzr87hjdgqr1pys5b"; depends=[ggplot2 gtools reshape2 yesno zoo]; }; + mueRelativeRisk = derive2 { name="mueRelativeRisk"; version="0.1.1"; sha256="16yclfmgxc32pv00vyb9fjdh4syax8ynizr8a29haiq22q5fqclh"; depends=[]; }; muhaz = derive2 { name="muhaz"; version="1.2.6"; sha256="1b7gzygbb5qss0sf9kdwp7rnj8iz58yq9267n9ffqsl9gwiwa1b7"; depends=[survival]; }; muir = derive2 { name="muir"; version="0.1.0"; sha256="0h3qaqf549v40ms7c851sspaxzidmdpcj89ycdmfp94b2q3bmz98"; depends=[DiagrammeR dplyr stringr]; }; multcomp = derive2 { name="multcomp"; version="1.4-8"; sha256="0fm78g4zjc6ank316qfw977864shmy890znn4fahwc8jjdhpc252"; depends=[codetools mvtnorm sandwich survival TH_data]; }; @@ -8538,21 +8708,21 @@ in with self; { multigroup = derive2 { name="multigroup"; version="0.4.4"; sha256="1r79zapziz3jkd654bwsc5g0rphrk9hkp1fpik8jvjsa1cix40mq"; depends=[MASS]; }; multilaterals = derive2 { name="multilaterals"; version="1.0"; sha256="11zfdhn6qzqz0n31g23bn40wnfzkjndb753iiqvihirphzb74v5v"; depends=[ape igraph]; }; multilevel = derive2 { name="multilevel"; version="2.6"; sha256="19zrvpq23dn69d7kai1rgw5b8ibmgybnbg6isliq0n8bv9jvrzia"; depends=[MASS nlme]; }; - multilevelPSA = derive2 { name="multilevelPSA"; version="1.2.4"; sha256="0v4mhdpagmkjsc8x4wlqxa88yl3v0y91a1bbq1lh3rhqfmp9yra5"; depends=[ggplot2 MASS party plyr PSAgraphics psych reshape xtable]; }; + multilevelPSA = derive2 { name="multilevelPSA"; version="1.2.5"; sha256="0926jaicdxk846vyfphb2hyg3zan3wal44x1bwamws0zf4flc4hj"; depends=[ggplot2 MASS party plyr PSAgraphics psych reshape xtable]; }; multimark = derive2 { name="multimark"; version="2.0.1"; sha256="0d283gvzqmdwr1sxgfb5ir9zw0sahj1wph7izcy1h63h6qlci828"; depends=[Brobdingnag coda Matrix mvtnorm prodlim raster RMark sp statmod]; }; multimode = derive2 { name="multimode"; version="1.1"; sha256="0dhzpvw71szyw454gi7460yr46j1vas109xgwyz9h6kwm6gi5ysn"; depends=[diptest ks rootSolve]; }; multinbmod = derive2 { name="multinbmod"; version="1.0"; sha256="1c4jyzlcjkqdafj9b6hrqp6zs33q6qnp3wb3d7ldlij7ns9fhg71"; depends=[]; }; - multinet = derive2 { name="multinet"; version="1.1.1"; sha256="13f7gqf45ydnyiv36gwcrc8mgv5gy61fak0in7f8bss4bvfldbxx"; depends=[igraph Rcpp]; }; + multinet = derive2 { name="multinet"; version="1.1.4"; sha256="0zajynn9mkpaqb5a208g90pv14rfxbb6k8gh9xikj4a42g9ijjsp"; depends=[igraph Rcpp]; }; multinets = derive2 { name="multinets"; version="0.2.0"; sha256="05m0xin8wxshmwb3b9cgsvi8037wvmirbyyim1xxx2ppfwrdr2a6"; depends=[igraph Rcpp]; }; multinomRob = derive2 { name="multinomRob"; version="1.8-6.1"; sha256="1fdjfk77a79fy7jczhpd2jlbyj6dyscl1w95g64jwxiq4hsix9s6"; depends=[MASS mvtnorm rgenoud]; }; - multipanelfigure = derive2 { name="multipanelfigure"; version="0.10.6"; sha256="1v53fanbnyba3f1ymgxr6q8yy1g5ax49z9ig1bxk3qywpixl8yh3"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types caTools ggplot2 gridGraphics gtable jpeg magrittr png rsvg tiff]; }; + multipanelfigure = derive2 { name="multipanelfigure"; version="0.10.7"; sha256="077pjjambyyz6z2a34vnzbwyx9imalhnca3yl6q6j7w12klis41h"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types caTools ggplot2 gridGraphics gtable jpeg magrittr png rsvg tiff]; }; multipleNCC = derive2 { name="multipleNCC"; version="1.2-1"; sha256="080wpyifpw41p6jip2ia7439jdhzyb7lbhs2qzzg0hn6c0qq7mrr"; depends=[mgcv survival]; }; multiplex = derive2 { name="multiplex"; version="2.8"; sha256="01l3kmvsrrq0c98dv5m25yjjcbc99in6dv9k5h54cyjsw4jsjhns"; depends=[]; }; multiplyr = derive2 { name="multiplyr"; version="0.1.1"; sha256="0bsf2zhzqwl3skg26fm27j2wpifky0mph26acrlq8p72njkbcw4d"; depends=[bigmemory bigmemory_sri magrittr]; }; - multipol = derive2 { name="multipol"; version="1.0-6"; sha256="1yjz0p4mcgzs98s61i8315wyhh986jxp8b0lq66375ckpr2ddcss"; depends=[abind]; }; + multipol = derive2 { name="multipol"; version="1.0-7"; sha256="1rkrg3kayxa05jayg8bk1mm3hcvi76570wqfja5953hd9j4krgha"; depends=[abind]; }; multirich = derive2 { name="multirich"; version="2.1.1"; sha256="04jr5jvds70j2psyxz12d2my61jcj5hvdyv10pvar2rpqaw0yxyh"; depends=[]; }; multiselect = derive2 { name="multiselect"; version="0.1.0"; sha256="1cda38zq7c1r56wdfpr5dg0jfw4kzi9p7jq59qm04j461j9ag3q6"; depends=[Hmisc]; }; - multisensi = derive2 { name="multisensi"; version="2.1"; sha256="17c1cddgzkgd583fh31wfjahpl5iv1casfs1aja000rqq1x2kfqm"; depends=[knitr sensitivity]; }; + multisensi = derive2 { name="multisensi"; version="2.1-1"; sha256="0f8i1jvrnmdsws5w7fz9k5pb5yfl5b9hnfd8aq4zj1r6m90kb6sz"; depends=[knitr sensitivity]; }; multisom = derive2 { name="multisom"; version="1.3"; sha256="0msxmrj4iawxg4vf4r7kj26zalxz4di2w4nxgxiakiig4g4ggy9z"; depends=[class kohonen]; }; multispatialCCM = derive2 { name="multispatialCCM"; version="1.0"; sha256="1fzd91w10iln8qb81z240lq3fi4gq22l4rh9npkav6fiq6g6rlp8"; depends=[]; }; multistate = derive2 { name="multistate"; version="0.2"; sha256="0jdgyzc99k4py39g98c4dlcdl918568ihcyhb7csxbsn1zn1qm9l"; depends=[date relsurv statmod survival]; }; @@ -8577,7 +8747,7 @@ in with self; { mvLSW = derive2 { name="mvLSW"; version="1.2.1"; sha256="012p828pyzz6xnv2akax5hx79v522dg4a2gqrjss526qylpg5j9l"; depends=[fields wavethresh xts zoo]; }; mvMORPH = derive2 { name="mvMORPH"; version="1.0.9"; sha256="09368vgyb1s18awfr07hs1s40n2h15hy08fmir3ayhdfrdain4k6"; depends=[ape corpcor phytools spam subplex]; }; mvMonitoring = derive2 { name="mvMonitoring"; version="0.1.0"; sha256="03nvq8nmrmrpzyxlsqzww5ghk640115l1jgmgwfahhjxkdpkzfxx"; depends=[BMS dplyr lazyeval plyr rlang robustbase xts zoo]; }; - mvPot = derive2 { name="mvPot"; version="0.1.3"; sha256="16m9i33sbgx69426i1nkimkrp75a6jbmkzlsp9bjbm7iyxdcl48b"; depends=[evd gmp MASS numbers]; }; + mvPot = derive2 { name="mvPot"; version="0.1.4"; sha256="04l9dn8amwp366b6lic5fkl4kck0x2m3xcsqz6as4c3h772nhq1w"; depends=[evd gmp MASS numbers]; }; mvProbit = derive2 { name="mvProbit"; version="0.1-8"; sha256="07dizclqjlwj29yb3xwjihjh8kmn6jiq5cpf8rcirylzykfdv3wk"; depends=[abind bayesm maxLik miscTools mvtnorm]; }; mvQuad = derive2 { name="mvQuad"; version="1.0-6"; sha256="016477dhjdkqiadc631vzpbp967mn4yli6by3s1k348mlfirwsi3"; depends=[data_table statmod]; }; mvSLOUCH = derive2 { name="mvSLOUCH"; version="1.3.3"; sha256="18gnxs1cx4f7r3m2vgrkmm41vwkamk9mn5hcgjacv2adl0ihnagd"; depends=[ape corpcor mvtnorm numDeriv ouch]; }; @@ -8589,8 +8759,8 @@ in with self; { mvctm = derive2 { name="mvctm"; version="1.1"; sha256="00lrnqnzpnvrl84b41ai33iwpyb4qzpjyqrw1d18hj6szybdfhsv"; depends=[Formula MNM nlme quantreg Rfit SpatialNP]; }; mvcwt = derive2 { name="mvcwt"; version="1.3"; sha256="0fqdyypmszm00rpl04z8kiiw6jd416a0b2rap3dqq3kchnz8h4s2"; depends=[foreach RColorBrewer]; }; mvdalab = derive2 { name="mvdalab"; version="1.4"; sha256="18wchy517qd45w5y0sr8lcafb7kmscy0q9vsryk9if6x2jq22lqz"; depends=[car dummies ggplot2 MASS moments penalized plyr reshape2 sn]; }; - mvglmmRank = derive2 { name="mvglmmRank"; version="1.1-2"; sha256="1051l10fbr7m9rmrlvj98660f0pn992n3vxiwnhml07wvvdknw3d"; depends=[Matrix numDeriv]; }; - mvinfluence = derive2 { name="mvinfluence"; version="0.8"; sha256="08p5hxqa8qp8g52w2d3jqbjzrv607fdm80k6vwaz63fxhk8h82wq"; depends=[car heplots]; }; + mvglmmRank = derive2 { name="mvglmmRank"; version="1.2-1"; sha256="1gyc1xjyapadrv43kd4kngld37q8drhx4qfcimsvf7jdp33y6g5d"; depends=[MASS Matrix numDeriv]; }; + mvinfluence = derive2 { name="mvinfluence"; version="0.8-1"; sha256="1lpxvc6g8g9kkshxg41a2dwbxzkfnqp4dggr2j5hh2h6f0xrca4j"; depends=[car heplots]; }; mvmesh = derive2 { name="mvmesh"; version="1.5"; sha256="0my43559jh8ln1fx5rh5vw24vr6kxpd2h5scylfxfv2qfk794l0b"; depends=[abind geometry rcdd rgl SimplicialCubature]; }; mvmeta = derive2 { name="mvmeta"; version="0.4.11"; sha256="1h1393s7xdi4sv461srsard6w961mcxxmxq9mkmfsgw5hdmkwkr2"; depends=[]; }; mvnTest = derive2 { name="mvnTest"; version="1.1-0"; sha256="0p37skzpljzz19x1hwh2hbxqins19zkbz7nlgfws5pgp9apazafq"; depends=[MASS mvtnorm]; }; @@ -8613,9 +8783,9 @@ in with self; { mwa = derive2 { name="mwa"; version="0.4.1"; sha256="0bd4i1zzwmcsrm2bg14f528yav5hb6qxcd7x4i5rwdcx1hlx27bw"; depends=[cem MASS rJava]; }; mwaved = derive2 { name="mwaved"; version="1.1.5"; sha256="1hb7y42fy26pv6cf235g4xx1vyvwx7chwryi7phjd2aavxffj18z"; depends=[Rcpp shiny]; }; mxkssd = derive2 { name="mxkssd"; version="1.1"; sha256="0m9763dqrk8qkrvp18bsv96jv0xhc2m8sbxdk6x3w6kdjcl663p2"; depends=[]; }; - myTAI = derive2 { name="myTAI"; version="0.6.0"; sha256="15r3ipan491n8mvmq9b1bkwx99gy6inq0nxrk35kqjjhfv2bq7c4"; depends=[doParallel dplyr edgeR fitdistrplus foreach ggplot2 gridExtra nortest RColorBrewer Rcpp readr reshape2 scales taxize tibble]; }; + myTAI = derive2 { name="myTAI"; version="0.7.0"; sha256="1x7zhkjm89xdzgn4z2ivl9w5srsfbavzdw8kgn2v7x75ihs0dr2n"; depends=[biomartr doParallel dplyr edgeR fitdistrplus foreach ggplot2 gridExtra nortest RColorBrewer Rcpp readr reshape2 scales taxize tibble]; }; mycobacrvR = derive2 { name="mycobacrvR"; version="1.0"; sha256="1xd9ackzdd8db6bayza0bg4n256mi9rdqih0cdc0nl212c3iz75g"; depends=[]; }; - mycor = derive2 { name="mycor"; version="0.1"; sha256="1ibcxl9v2d2mxpwad0rv5dw1j645rrg05f4aqvyhyd40hz9823mr"; depends=[lattice]; }; + mycor = derive2 { name="mycor"; version="0.1.1"; sha256="00hqmvga22bv43833s974s7ky7lbry3r2bb5kza7kvkn1p6773rg"; depends=[lattice]; }; myepisodes = derive2 { name="myepisodes"; version="1.1.1"; sha256="0xk9bwgpl630nhc8qa2pc0rwqbqk3haxnp78gfxq6sn6z7i44k1p"; depends=[XML]; }; mztwinreg = derive2 { name="mztwinreg"; version="1.0-1"; sha256="1rg6ikaqdrc7q44s3r3km8h45prnvcpzpxd7nxbmh209iz9j19ai"; depends=[mclogit rms]; }; n1qn1 = derive2 { name="n1qn1"; version="6.0.0-1"; sha256="01bci81lhanxpfl454gl09krgb4229dnq9f34bngwm8ygvdadfgy"; depends=[Rcpp RcppArmadillo]; }; @@ -8623,7 +8793,8 @@ in with self; { nCal = derive2 { name="nCal"; version="2017.12-3"; sha256="1k03zrf67il7miap81r2fdnsi15i98wmwc3a8zxn54qfr2w9pcy6"; depends=[drc gdata gWidgets kyotil]; }; nFCA = derive2 { name="nFCA"; version="0.3"; sha256="1jyyzagmppm3i7vh3ia4ic0zql1w04f66z81v0zpdihd4cbl5ra7"; depends=[]; }; nFactors = derive2 { name="nFactors"; version="2.3.3"; sha256="016d76yfxz7gx7zz5dgwjmj2c5m6kxdmqj0lln5w6d70r9g1kxg7"; depends=[boot lattice MASS psych]; }; - nLTT = derive2 { name="nLTT"; version="1.3.1"; sha256="1wha26lcgk2kw48vyiws1ciyp8x6d7nmkrahh5b8w23ns6bqpngf"; depends=[ape coda deSolve]; }; + nLTT = derive2 { name="nLTT"; version="1.4"; sha256="0718r93xw8hw639xpa5w6lax7agr2k3avqx9dcdybqdp19x9qia0"; depends=[ape coda deSolve testit]; }; + nVennR = derive2 { name="nVennR"; version="0.2.0"; sha256="0y0y15r7j3in2rqiiz42b9rzljajp0pk8172kc7gj9nshih3ryqw"; depends=[grImport2 Rcpp RcppProgress rsvg]; }; na_tools = derive2 { name="na.tools"; version="0.2.1"; sha256="1fdbrf97mvak44vzarwqr4w6cs6msr42zcfxl2ci3i67nlgsv4pl"; depends=[]; }; nabor = derive2 { name="nabor"; version="0.4.7"; sha256="16dxnvq6yxlrignzvxjdwzwm32fn2a8bsjqjsg5qz94ir7g3pzm6"; depends=[BH Rcpp RcppEigen]; }; nadiv = derive2 { name="nadiv"; version="2.14.3.1"; sha256="08276bakyrn9d9vh08yzan60kigsihwfhgx788gwp6pk8v6m25wa"; depends=[Matrix]; }; @@ -8635,7 +8806,7 @@ in with self; { nanop = derive2 { name="nanop"; version="2.0-6"; sha256="007gdc93pk0vpfmsw7zgfma2k1045n2cxwwsyy276smy0ys9fdhp"; depends=[distrEx rgl]; }; nanotime = derive2 { name="nanotime"; version="0.2.0"; sha256="138qz844sczgzzl8vn5079590hnq96w7jdbn851cpw64gmq21r4w"; depends=[bit64 RcppCCTZ zoo]; }; naptime = derive2 { name="naptime"; version="1.3.0"; sha256="1cadfv5sdsmz61kf96hf2gbnghf24q40g5c3h9b8prvkxslap691"; depends=[lubridate]; }; - nardl = derive2 { name="nardl"; version="0.1.3"; sha256="1361bh94m4dzcijg1929av88sni4f5ccwwyxsrg7kcxdxl3zhqp0"; depends=[Formula gtools matlab strucchange tseries]; }; + nardl = derive2 { name="nardl"; version="0.1.4"; sha256="108m1bngal27pz80l1rdlgrx7x4id42ch95w1g9d0r5jnlxlvxp7"; depends=[Formula gtools matlab strucchange tseries]; }; narray = derive2 { name="narray"; version="0.4.0"; sha256="0cr0y8mqwprxk0bv9160xvqxgvqkihn3avzsjm6ccivvb8zlkqxv"; depends=[reshape2 stringr]; }; nasadata = derive2 { name="nasadata"; version="0.9.0"; sha256="0y88qdy8c1y0prsajxic5vdqfixv9knjsbhw3vbfac8wv3a69bjl"; depends=[dplyr jsonlite plyr png]; }; nasaweather = derive2 { name="nasaweather"; version="0.1"; sha256="05pqrsf2vmkzc7l4jvvqbi8wf9f46854y73q2gilag62s85vm9xb"; depends=[]; }; @@ -8651,17 +8822,17 @@ in with self; { nbconvertR = derive2 { name="nbconvertR"; version="1.0.2"; sha256="1dc9jxfibvb27qwiykj93322nb1ahwrg69zqcc0p9xp0rpsim02w"; depends=[]; }; nbpMatching = derive2 { name="nbpMatching"; version="1.5.1"; sha256="0f90k9vq05gkc0sgywb98frig63df0ih4z41dq7m2inx1zk5rqns"; depends=[Hmisc MASS]; }; ncappc = derive2 { name="ncappc"; version="0.2.1.1"; sha256="19wq7ihcr8989xpzf1dsxz1kwwzqvsx2mwcciqv9204k4fc94zjc"; depends=[dplyr ggplot2 gridExtra gtable knitr lazyeval readr reshape2 scales testthat xtable]; }; - ncar = derive2 { name="ncar"; version="0.3.7"; sha256="1cbcadyz84w629bz86sivfyf545w9cda078liq9l0j7gm5z5g2if"; depends=[NonCompart rtf]; }; + ncar = derive2 { name="ncar"; version="0.3.8"; sha256="02xglxz63b9b7yfkwqrh81spzkmvglay6wpylm9fwcqxdasf3bj5"; depends=[NonCompart rtf]; }; ncbit = derive2 { name="ncbit"; version="2013.03.29"; sha256="0f07h8v68119rjvgm84b75j0j7dvcrl6dq62vp41adlm2hgjg024"; depends=[]; }; ncdf_tools = derive2 { name="ncdf.tools"; version="0.7.1.295"; sha256="1jgxivmg2gzvkn09n13i5xr1v0xcyp5ckhwxz6g5kdh9z2dkjhc2"; depends=[abind chron JBTools plotrix raster RColorBrewer RNetCDF]; }; ncdf4 = derive2 { name="ncdf4"; version="1.16"; sha256="0lwjjis0b83c4l3xvqai4ckzrskd6mychck1iwxcxgjvh0d77mgd"; depends=[]; }; ncdf4_helpers = derive2 { name="ncdf4.helpers"; version="0.3-3"; sha256="051akd7r6zx805a0xwcs95q5sd8alag0f1gzqjk3n188q8r3ji5j"; depends=[abind ncdf4 PCICt]; }; ncdump = derive2 { name="ncdump"; version="0.0.3"; sha256="09g98mzpky32z41jf23ahzhyv34l34y1gqq99j2hl4pqlvvhxs9i"; depends=[dplyr ncdf4]; }; - ncf = derive2 { name="ncf"; version="1.1-8"; sha256="1hnx6k21ss1mp4llzbfxpsv2y7z1nxf4c46rwq3qpmvqhnw6hh9s"; depends=[]; }; + ncf = derive2 { name="ncf"; version="1.2-3"; sha256="0d4qbfdhwy071vhkfjn9385vak73zf9c9ghbbiba1ha2d9d2irsl"; depends=[]; }; ncg = derive2 { name="ncg"; version="0.1.1"; sha256="1jzkzp61cc5jxmdnl867lcrjjm7y2iw9imzprbd098p1j3w8fvj7"; depends=[]; }; ncmeta = derive2 { name="ncmeta"; version="0.0.2"; sha256="1qr0zfyy8g3zrmvg6i6b7sfvl3lavr391rqgf6pqhslg7i9cgpiz"; depends=[dplyr rlang RNetCDF tibble]; }; ncpen = derive2 { name="ncpen"; version="0.2.0"; sha256="1wrpscd9n7z9lz7537qyy4rn4pjznlb8zwb79kkzmnfvyj21fi1r"; depends=[Rcpp RcppArmadillo]; }; - ncvreg = derive2 { name="ncvreg"; version="3.9-1"; sha256="1v71r2k25n28lhpqsgzaaw48w1gwn0yjbir64hx5lchdbvd5k1j3"; depends=[]; }; + ncvreg = derive2 { name="ncvreg"; version="3.10-0"; sha256="0q9rk1mz2rm1h99m093kz7a2p6fl3pj4nqzblp3154q8i1kva7za"; depends=[]; }; ndjson = derive2 { name="ndjson"; version="0.6.0"; sha256="0w7a587q45hkzmjhzlyrhk0hw4c8avkfzf4ai0wib5qk3al8gk6n"; depends=[data_table dplyr dtplyr Rcpp]; }; ndl = derive2 { name="ndl"; version="0.2.17"; sha256="08h01rw7gsa31zp91q2rsw1ba9yf0fyhz3w8s9xq5788qwc80280"; depends=[Hmisc MASS Rcpp]; }; ndtv = derive2 { name="ndtv"; version="0.10.0"; sha256="1j4g5qclfbw7fkykaclrsb2d70vy40fd1rgr1n73qyrkx0fyym44"; depends=[animation base64 jsonlite MASS network networkDynamic sna statnet_common]; }; @@ -8671,7 +8842,7 @@ in with self; { neatmaps = derive2 { name="neatmaps"; version="1.0.7"; sha256="07nr8c5i1s3sba4l2123vb50b1cgn1qjdckwmyjwwai1yb3smkag"; depends=[dendextend ggplot2 heatmaply igraph pvclust]; }; needs = derive2 { name="needs"; version="0.0.3"; sha256="16dkjpijz3rz7kd5ggxsdg55iwd42nll1vk6g5ix4xdbqrx6cp9x"; depends=[]; }; needy = derive2 { name="needy"; version="0.2"; sha256="1ixgpnwrg6ph1n5vy91qhl1mqirli9586nzkmfvzjrhdvrm0j5l0"; depends=[]; }; - negenes = derive2 { name="negenes"; version="1.0-5"; sha256="0fdhc0v0b820wfg3sypvya7zhg7mhfmdbfiwn1lj3a2xg01zvc2n"; depends=[]; }; + negenes = derive2 { name="negenes"; version="1.0-8"; sha256="0qyhypryp3p8c876jffg1syg05b370mw24clwlx733yx86qhmb1v"; depends=[]; }; neighbr = derive2 { name="neighbr"; version="1.0"; sha256="0612nzpryj4xp0ncpvpn56x5n9ammzjp3ysq1rj1fc84h0p7nml3"; depends=[]; }; neldermead = derive2 { name="neldermead"; version="1.0-11"; sha256="0gf9rfwz48sadl6960mpfb6a3l9n5p28yq3n0a9vz8mr57vh1dzg"; depends=[optimbase optimsimplex]; }; neotoma = derive2 { name="neotoma"; version="1.7.0"; sha256="0f4s5yw0yj4n8lkvbl2l3ivdclg9pknyss7qhppp85rdxzwxilpq"; depends=[analogue httr jsonlite leaflet plyr reshape2 xml2]; }; @@ -8679,19 +8850,19 @@ in with self; { nesRdata = derive2 { name="nesRdata"; version="0.1.0"; sha256="1h33hql0vgkr2ps1ysisdxxb0cnm18mh8sbd3fxy9xf42icwfwdb"; depends=[dataone dplyr purrr rappdirs readr]; }; nestedRanksTest = derive2 { name="nestedRanksTest"; version="0.2"; sha256="0r08jp8036cz2dl1mjf4qvv5qdcvsrad3cwj88x31xx35c4dnjgj"; depends=[]; }; net_security = derive2 { name="net.security"; version="0.3.0"; sha256="15vvcmakl9hl1srdhjf73g2bwwcxn93220i4gv0rcsw5732mjanz"; depends=[data_table dplyr jsonlite plyr R_utils stringr XML]; }; - netCoin = derive2 { name="netCoin"; version="0.2.7"; sha256="0dzncn72zl3yp2gds7vmjk5j82rb80j03ivkf74b0z5s4ckxhc9b"; depends=[haven igraph Matrix]; }; + netCoin = derive2 { name="netCoin"; version="0.2.8"; sha256="0axac72fj5qhssdpx8k20lgayzpwzcd3pp7cz4mv6cwfzc0y8768"; depends=[haven igraph Matrix]; }; netassoc = derive2 { name="netassoc"; version="0.6.3"; sha256="1hyshnbpq60a3y13b4sh1c2rk78x09q01b7q6xrgv10w7bn9r2sg"; depends=[corpcor huge igraph infotheo vegan]; }; netcoh = derive2 { name="netcoh"; version="0.2"; sha256="0q60hvyparlwdww6as6hcdzfs6q3n8z1rfpj53r5q2s77x6q07xx"; depends=[Matrix Rcpp RcppArmadillo]; }; netcom = derive2 { name="netcom"; version="1.0.4"; sha256="0fka14sffm0p1gldk27fd62ng05spfpbn665b4w5hdf1z4z0bs20"; depends=[clue expm igraph Matrix pdist pracma vegan]; }; netdiffuseR = derive2 { name="netdiffuseR"; version="1.19.0"; sha256="0rnf7hf5vxpqw2rn00yqmkgpsx752pmfigyggbs4ikfbcsjq24sx"; depends=[boot igraph MASS MatchIt Matrix network networkDynamic Rcpp RcppArmadillo sna SparseM]; }; netgen = derive2 { name="netgen"; version="1.3"; sha256="1iywpl9n1yplnd38dff8m9mz1vlfbvplw393grhpav5czcknj160"; depends=[BBmisc checkmate ggplot2 igraph lhs lpSolve mvtnorm stringr]; }; netgsa = derive2 { name="netgsa"; version="3.0"; sha256="0cqyiilpxhdi6zmibn85y1aqwpcs1aialz34klakmllzn6kvdsng"; depends=[corpcor glasso glmnet igraph Matrix]; }; - netgwas = derive2 { name="netgwas"; version="0.1.3.1"; sha256="1fgs7dr4dhrs4hmscazsyiq1nkkx1vvygmarmy7pyqhxzv13kdwg"; depends=[glasso huge igraph MASS Matrix RBGL tmvtnorm]; }; - netmeta = derive2 { name="netmeta"; version="0.9-7"; sha256="0yi1x0dyi7kim2yz9qwsbdnx1k6k15nmv6wlaby9z9yl7p2ij3jq"; depends=[magic MASS meta]; }; + netgwas = derive2 { name="netgwas"; version="0.1.4.2"; sha256="19r168xppxgdj3b0b575b47vgmzbzkgwpqh499vlm5as9livjlyb"; depends=[glasso huge igraph MASS Matrix RBGL tmvtnorm]; }; + netmeta = derive2 { name="netmeta"; version="0.9-8"; sha256="0bkfxdz14lg9r51ykwmkmpm6vhbvly35hrcgj6f26g36ihagjksd"; depends=[magic MASS meta]; }; netrankr = derive2 { name="netrankr"; version="0.2.0"; sha256="1y56y5wv95d7mmjf8rrwr7cs0k64h9a2qbpind4xp0kakpjihn7m"; depends=[igraph Rcpp RcppArmadillo]; }; + netregR = derive2 { name="netregR"; version="0.3.0"; sha256="106qq3mafqbcdyhnjicbzc4rzi9mr262nqb3ncpzpcvkf0xd988w"; depends=[Matrix]; }; nets = derive2 { name="nets"; version="0.9"; sha256="1wcr0fj50w3rqxw0k9cb81c2psdkb0dwwwzrjvxv50hksbhyi8kn"; depends=[igraph]; }; - nettools = derive2 { name="nettools"; version="1.0.1"; sha256="13fw316r31g9cjlbyy9qfccsyagxb6pyvn5k32f166b7vj92mk1q"; depends=[combinat dtw igraph Matrix minerva minet rootSolve WGCNA]; }; - network = derive2 { name="network"; version="1.13.0"; sha256="11sg330xb7gcnl3f6lwhhjdabz6mk43828i2np635pqw4s4yl13s"; depends=[]; }; + network = derive2 { name="network"; version="1.13.0.1"; sha256="1bbkbqkqf1d7irfwh08c13c2pfypir1ssvlqrln83irqns1ikdv0"; depends=[]; }; networkD3 = derive2 { name="networkD3"; version="0.4"; sha256="02wxki67drppgfka1is1ykg1f2rxf0x0657c0crj7ipfy62jbf1k"; depends=[htmlwidgets igraph magrittr]; }; networkDynamic = derive2 { name="networkDynamic"; version="0.9.0"; sha256="1949fbcw0gq8lsm6rx5d5mpj1y9k4rk2v0pmm1kxi5igi6yd8lg9"; depends=[network statnet_common]; }; networkDynamicData = derive2 { name="networkDynamicData"; version="0.2.1"; sha256="176al8jp0gha6yzhyn5flmyackmmdnh1h8sasqrdcmba7ha7cya6"; depends=[network networkDynamic]; }; @@ -8706,34 +8877,39 @@ in with self; { neuralnet = derive2 { name="neuralnet"; version="1.33"; sha256="14ga04mcd793v9a2584jb9l7n20kw00fgy3gayfwrkr1j39szdls"; depends=[MASS]; }; neurobase = derive2 { name="neurobase"; version="1.26.1"; sha256="0fb2cvh3j650zjx7b60jfrvm5i7n3l98wis91bmyr9hx3qz24rj5"; depends=[abind matrixStats oro_nifti R_utils RNifti]; }; neuroblastoma = derive2 { name="neuroblastoma"; version="1.0"; sha256="0hs87fvwaq53xxbh2dw3hjsmf1zkyqli9qyacxf72fnkyhhl8b45"; depends=[]; }; - neurohcp = derive2 { name="neurohcp"; version="0.7.3"; sha256="0mz8aiyimw3vqkgm54mwfvnki5hg1j958r71fs1k213zn1cg9qqr"; depends=[base64enc digest httr xml2]; }; + neurohcp = derive2 { name="neurohcp"; version="0.8.0"; sha256="1p38n2ggz2yj6fqrlf2jm1jnjbv8a0ifi477f5qklmr4bga2c4kr"; depends=[base64enc digest httr xml2]; }; neuroim = derive2 { name="neuroim"; version="0.0.6"; sha256="00cjr6pkip6zi2d0q3qbn3lb3k0z82v6c19qslvgpa9n0g63dr5p"; depends=[abind assertthat hash iterators Matrix Rcpp readr rgl stringr yaImpute]; }; neuropsychology = derive2 { name="neuropsychology"; version="0.5.0"; sha256="0hlbjf8hxz4cl7fvg9mbyfmcyyxncc2nh9h1mrd2yzgrpgn0d0b5"; depends=[BayesFactor caret dplyr ggcorrplot ggplot2 Hmisc htmlTable lme4 MuMIn png ppcor psych stringi tidyr tidyverse tm wordcloud2]; }; + neutralitytestr = derive2 { name="neutralitytestr"; version="0.0.1"; sha256="15bgb9bh4nwjhjq6wkfbk7cys4mrih3bnjv527mrack8pwkybgpa"; depends=[cowplot dplyr ggplot2 ggpmisc pracma scales]; }; neverhpfilter = derive2 { name="neverhpfilter"; version="0.2-0"; sha256="0m4gbqnjw2nmhf25svznlf6pd0b0mslk52lpirmlj1iv04w1aq1i"; depends=[xts zoo]; }; + newTestSurvRec = derive2 { name="newTestSurvRec"; version="1.0.2"; sha256="06p782md33wqh5wa1735yg5i01d42p74kl7h5qhqs9cd732ls6pz"; depends=[]; }; ngram = derive2 { name="ngram"; version="3.0.4"; sha256="1q4y64dy7vcjikbfx20fpdiy1kwvxay4y90xr5j8d8zkqnva0way"; depends=[]; }; ngramrr = derive2 { name="ngramrr"; version="0.2.0"; sha256="1p8s4p3h27g647rxx9qjfad5dzbngjbmvhw4gz0jbsmfqrsf72by"; depends=[tau tm]; }; ngspatial = derive2 { name="ngspatial"; version="1.2-1"; sha256="1c65ws9b9s2grr44lqg8026c4p2875d0426dfmrakpb44mw2zppp"; depends=[batchmeans Rcpp RcppArmadillo]; }; ngstk = derive2 { name="ngstk"; version="0.2.1"; sha256="12zpl20i07d1f9navs9jjrialfh798wrfn1241j7s9h3rd6xi40l"; depends=[configr data_table stringr]; }; - nhanesA = derive2 { name="nhanesA"; version="0.6.4.3.3"; sha256="09mpxmk8w48hc14167jd2xifnj0kjz9h3h76bdnbb33wvhkn4jld"; depends=[Hmisc magrittr plyr rvest stringr xml2]; }; + nhanesA = derive2 { name="nhanesA"; version="0.6.4.4"; sha256="0vl8bg718fk97x3yrjkg48hj3lap4gzhri53gzcwz9g4rfyrlwxp"; depends=[Hmisc magrittr plyr rvest stringr xml2]; }; nhlscrapr = derive2 { name="nhlscrapr"; version="1.8.1"; sha256="107k063279w9cy6in99rn03w2rq42ci8s6dvb9x6f9w7y3bdpvzn"; depends=[biglm bitops RCurl rjson]; }; nhstplot = derive2 { name="nhstplot"; version="1.0.1"; sha256="1f07gfmbx80as54mlzdbs2z1vzc78rjy6i6m7zd4jplgcqdcynws"; depends=[ggplot2]; }; nice = derive2 { name="nice"; version="0.4-1"; sha256="1p8vmimiq9sbjvbx6c2wqwwkpnzw4kkdvjry6qyadmm3frwhj5qb"; depends=[]; }; nicheROVER = derive2 { name="nicheROVER"; version="1.0"; sha256="0sa7wfpzkin78vz48vwa5iac82v5l1s3zczdxz8sc2kyg22fj0aw"; depends=[mvtnorm]; }; nima = derive2 { name="nima"; version="0.4.5"; sha256="1fllq76k4r07ymd58s865hgg3yrmwa34kr5mjd89n50mm1m110mh"; depends=[assertthat devtools ggplot2 ggthemes gridExtra gtools plyr ProjectTemplate scales survival]; }; - nimble = derive2 { name="nimble"; version="0.6-9"; sha256="1lkf386qcgw5gr8cpxfh2ncrc9wj59icygi9m37c8077h3h0sj03"; depends=[coda igraph R6]; }; + nimble = derive2 { name="nimble"; version="0.6-10"; sha256="0aa6823b7xnp2bgrc3jwjrc2py9y57xadsahzva4zxn7vlsp5f36"; depends=[coda igraph R6]; }; nipals = derive2 { name="nipals"; version="0.4"; sha256="0h9jxmj44x3lllxk1y2izkslafbiab175qrsxlnfcvhnaj13zsds"; depends=[]; }; + nitrcbot = derive2 { name="nitrcbot"; version="1.0"; sha256="1cg52zv72ppv8vgfl3rccgykw2bhlk3j7pm47cydfmhqbc6sn6by"; depends=[dplyr httr]; }; nivm = derive2 { name="nivm"; version="0.3"; sha256="111jkgirgsl1j36xgwi81wzwxial3vdw8mqzi1faldxxd9a2cixm"; depends=[bpcp ssanv]; }; nlWaldTest = derive2 { name="nlWaldTest"; version="1.1.3"; sha256="1cppdz8qvigjdz4sgr1gm2j09zi407xxmryc28zc7ps7rvgy344h"; depends=[]; }; nlcv = derive2 { name="nlcv"; version="0.3.2"; sha256="1lknlqd64p15lnkydbi7zx7lmhg1fdl750yjqjaccdjzrgrqvgkv"; depends=[a4Core Biobase e1071 ipred kernlab limma MASS MLInterfaces multtest pamr randomForest RColorBrewer ROCR xtable]; }; nleqslv = derive2 { name="nleqslv"; version="3.3.1"; sha256="1n1sbp7436yd5g6v0060j2iwk4rppjq2pc5x47g9wlwnskdfgvl7"; depends=[]; }; - nlme = derive2 { name="nlme"; version="3.1-131.1"; sha256="1xafi670a9jzb52kqxkacxfmy0viac3aql5byfq86kgkgla2sg0y"; depends=[lattice]; }; + nlirms = derive2 { name="nlirms"; version="3.4.4"; sha256="1njyfip377a0f6hf9y32s077b4jv4h8ydbjgnl68yfypxbfn2xyx"; depends=[gridExtra gtable]; }; + nlme = derive2 { name="nlme"; version="3.1-137"; sha256="11vyxxc0n36vb8d8g02zr0402ymicvbifwdsqm7gy9iqqnwrn101"; depends=[lattice]; }; nlmeODE = derive2 { name="nlmeODE"; version="1.1"; sha256="1zp1p98mzbfxidl87yrj2i9m21zlfp622dfnmyg8f2pyijhhn0y2"; depends=[deSolve lattice nlme]; }; nlmeU = derive2 { name="nlmeU"; version="0.70-3"; sha256="05kxymgybziiijpb17bhcd9aq4awmp5km67l2py9ypakivi0hc6l"; depends=[nlme]; }; nlmixr = derive2 { name="nlmixr"; version="0.9.0-3"; sha256="1fwnq0bnsqadadgy9i1083dz4zkidwdxm2ncy6jyrk1pb055m318"; depends=[BH brew dparser ggplot2 inline lattice lbfgs Matrix memoise minqa mvtnorm n1qn1 nlme numDeriv PreciseSums R_utils Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders]; }; nlmrt = derive2 { name="nlmrt"; version="2016.3.2"; sha256="1g0qq0a933ay65gkp04qgn2wqk6vw79pj2a228c2ski4rcmkjxyn"; depends=[]; }; - nlnet = derive2 { name="nlnet"; version="1.0"; sha256="1ipds80qlv2zrl51v0n670g9ihb68sm98p06nvs97w05i64g8frq"; depends=[coin fdrtool igraph TSP]; }; + nlnet = derive2 { name="nlnet"; version="1.2"; sha256="00lcyz5csjj9qbhh7yw0qlbnyv32k0c2dpm23v04n9wkdgs67jy0"; depends=[coin e1071 earth fdrtool igraph randomForest ROCR TSP]; }; nloptr = derive2 { name="nloptr"; version="1.0.4"; sha256="1cypz91z28vhvwq2rzqjrbdc6a2lvfr2g16vid2sax618q6ai089"; depends=[]; }; - nlreg = derive2 { name="nlreg"; version="1.2-2"; sha256="1pi7057ldiqb12kw334iavb4i92ziy1kv4amcc4d1nfsjam03jxv"; depends=[statmod survival]; }; + nlr = derive2 { name="nlr"; version="0.1-1"; sha256="12j2hp5fgpdz7pvlpykhf9zp1sw1f6vzhh5ykk9b2diaf3l55zsl"; depends=[GA MASS nlme quantreg robcor TSA tseries]; }; + nlreg = derive2 { name="nlreg"; version="1.2-2.1"; sha256="08pz3qycnsvz175ppj23i2i0wcif6imi6fc117n8802ln3npwm64"; depends=[statmod survival]; }; nlrr = derive2 { name="nlrr"; version="0.1"; sha256="09wm8s5sadkhkq9pb3fjk66cb2xn8py46w1d7yp7fjhczh31bjsq"; depends=[Hmisc rms]; }; nls_multstart = derive2 { name="nls.multstart"; version="1.0.0"; sha256="08zdyx5hp1xbqjspk0f89fca5gc0b5j87hsccvn9dxn2lrnwk8nb"; depends=[dplyr minpack_lm purrr tibble tidyr]; }; nls2 = derive2 { name="nls2"; version="0.2"; sha256="0k46i865p6jk0jchy03jiq131pc20h9crn3hygzy305rdnqvaccq"; depends=[proto]; }; @@ -8749,34 +8925,36 @@ in with self; { nlt = derive2 { name="nlt"; version="2.1-3"; sha256="1j0xrrbr1hvfda8rvnc17lj96m6cz24faxvwn68ilf7j1ab2lkgn"; depends=[adlift EbayesThresh]; }; nlts = derive2 { name="nlts"; version="0.2-2"; sha256="0bx6xqa3j0k01p43vnv5lcv2pryjzgsak77y1cr9rm2xwqa3j6az"; depends=[acepack locfit]; }; nmaINLA = derive2 { name="nmaINLA"; version="0.1.1"; sha256="0976jafmdhy2rz5fcarb7hh1vaanm8l2610hk06f5k93xjhypg8j"; depends=[]; }; - nmathresh = derive2 { name="nmathresh"; version="0.1.2"; sha256="1ldxhk2ry3m8q0881fis403r303n431csmp0gp4785mafy476b5h"; depends=[ggplot2 gridExtra gtable Matrix nnls]; }; - nmfem = derive2 { name="nmfem"; version="1.0.0"; sha256="0bkw27b59knppfh4qnhrcs2j0mpxak7iyb7lskccv6ibym2kvljw"; depends=[d3heatmap dplyr mixtools plyr tidyr]; }; + nmathresh = derive2 { name="nmathresh"; version="0.1.3"; sha256="09pxbizmvdp2l5j1gs0v3xk2lsyclx5rndaw6b4ccn61m3x060ls"; depends=[ggplot2 gridExtra gtable Matrix nnls]; }; + nmfem = derive2 { name="nmfem"; version="1.0.1"; sha256="10y3s7g76pnqqyg8wc3cyjiqay7scp0bdlly4yx30v2sbvxf0msx"; depends=[d3heatmap dplyr mixtools plyr tidyr]; }; nmfgpu4R = derive2 { name="nmfgpu4R"; version="0.2.5.2"; sha256="05066rgbbp6kj2d67nzf3d1pf32gypz9ammz4ba88yxblydb3cwk"; depends=[Matrix Rcpp SparseM stringr]; }; - nmslibR = derive2 { name="nmslibR"; version="1.0.0"; sha256="12022g9jww718bqpp7yaapafnjxj29sx7mircj8a7zwww58a7v0q"; depends=[Matrix R6 Rcpp RcppArmadillo reticulate]; }; - nmw = derive2 { name="nmw"; version="0.1.2"; sha256="1p2h13g0ss0v2jy0ii0r0qgf8i1f0dc8zhii05k2vr6cbiapslv3"; depends=[numDeriv]; }; + nmslibR = derive2 { name="nmslibR"; version="1.0.1"; sha256="02c2ns9dw1mkr5gmsd31j0yjcr3vr302yvqkfdkmm9csppdcrmb3"; depends=[Matrix R6 Rcpp RcppArmadillo reticulate]; }; + nmw = derive2 { name="nmw"; version="0.1.4"; sha256="1vj7b2p40x0h3xp45qzar86i9439mj8y3r5hnlbwa025jqdf2g0q"; depends=[numDeriv]; }; + nna = derive2 { name="nna"; version="0.0.2.1"; sha256="17cz1jf7iv61wspqldfdwbdjhlr0wq09idkzlivfb8aik5w9f0z5"; depends=[]; }; nneo = derive2 { name="nneo"; version="0.1.0"; sha256="0jaaz15y1csh3bwmzp7mgx86m3f0w3ykzb8qdvg8ak2grxw3wl6a"; depends=[crul data_table fauxpas jsonlite tibble]; }; nnet = derive2 { name="nnet"; version="7.3-12"; sha256="17amqnw9dpap2w8ivx53hxha2xrm0drwfnj32li0xk41hlz548r7"; depends=[]; }; nnetpredint = derive2 { name="nnetpredint"; version="1.2"; sha256="1c6s9wm6vhylwv4xhp2hkllw18zj8hdr17ls9vlxm9qs3wx1v48w"; depends=[RSNNS]; }; nnfor = derive2 { name="nnfor"; version="0.9.2"; sha256="1wxv8s5547spw155rj7nlilsfn5d7m40xpfy87mady93n25pwm3d"; depends=[forecast glmnet MASS neuralnet plotrix]; }; - nngeo = derive2 { name="nngeo"; version="0.1.0"; sha256="1r92d5bgd7m9d6v424fry4hsbnwzhzww1sqrphwnk2aag70hqv0g"; depends=[geosphere lwgeom RANN sf units]; }; + nngeo = derive2 { name="nngeo"; version="0.1.5"; sha256="1285a0p461wm91zriy7rh3awh0k0z7ifmjkxffyxh1l84y51jfak"; depends=[geosphere lwgeom RANN Rcpp sf units]; }; nnlasso = derive2 { name="nnlasso"; version="0.3"; sha256="1n7karlmgq61z9ywfx9xb5wvmxx40ydpnzzazj1xr70qlv5m0qk4"; depends=[]; }; nnls = derive2 { name="nnls"; version="1.4"; sha256="07vcrrxvswrvfiha6f3ikn640yg0m2b4yd9lkmim1g0jmsmpfp8f"; depends=[]; }; noaastormevents = derive2 { name="noaastormevents"; version="0.1.0"; sha256="1pkfmvp20f6xi2iy7l6c67zspp9f4wkrh7s308hlklms2difhp6m"; depends=[choroplethr choroplethrMaps data_table dplyr forcats ggplot2 htmltab hurricaneexposure lubridate maps plyr RColorBrewer stringr tidyr viridis XML]; }; nodeHarvest = derive2 { name="nodeHarvest"; version="0.7-3"; sha256="0nh3g50rk9qzrarpf29kijwkz9v60682i0ag77j2ipyvhhbpwpkc"; depends=[quadprog randomForest]; }; - nodiv = derive2 { name="nodiv"; version="1.1.8"; sha256="0ws0yp4j26yf45gmbvb6dpq476z8mn8yl6xdrzs0yxliizpz8jsf"; depends=[ape picante raster sp vegan]; }; + nodiv = derive2 { name="nodiv"; version="1.1.9"; sha256="0pbcigfqps44i07yghcg5zx5nlybivkb34bz67fnkgkpbkbs79k7"; depends=[ape picante raster sp vegan]; }; nofrills = derive2 { name="nofrills"; version="0.3.0"; sha256="18hryq6clywlr2f45az6ryslkkarly45nacln4bwk6ip0yfl5s98"; depends=[rlang]; }; noia = derive2 { name="noia"; version="0.97.1"; sha256="0yldfmnb4ads4s9v9cj1js8zf1w1hxasqq6qjyzwknmvmp7kh62h"; depends=[]; }; noise = derive2 { name="noise"; version="1.0"; sha256="1a48s9vpz3nc058966lad8hydmg7z0vbzfwcf6nxc9g3c8mw4nig"; depends=[preprocessCore]; }; nomclust = derive2 { name="nomclust"; version="1.1.1106"; sha256="17hb89k72sw3ya0wm3n95mpx4vj7mpl4mzs8qwl2773dh2mcjgjq"; depends=[cluster dummies]; }; nomine = derive2 { name="nomine"; version="1.0.0"; sha256="1yaxhac002fxcyiz5x562fnhrsq9h9nx0qmw4rykjsc5l2qbi9gd"; depends=[httr RCurl]; }; + nomisr = derive2 { name="nomisr"; version="0.2.0"; sha256="0a83fcn5qq2wycbn6acfhapni3k84jf1xj7aarmnr9az1gqdbwc9"; depends=[dplyr httr jsonlite readr tibble]; }; nomogramEx = derive2 { name="nomogramEx"; version="3.0"; sha256="16235rwblnzn8k53817llwy2pzhnpifh6ij159nxymjm8ar9qpbp"; depends=[pracma rms]; }; noncensus = derive2 { name="noncensus"; version="0.1"; sha256="0cfj17bfzddfshhhzv2ijhrp9ylcscmsysswjcsjfxmy3gbkd00q"; depends=[]; }; noncompliance = derive2 { name="noncompliance"; version="0.2.2"; sha256="1lcybgj95z7lz7p26xbsdiv0vvms4ab4f8kad0pclacf1l43v0j6"; depends=[data_table Rcpp]; }; noncomplyR = derive2 { name="noncomplyR"; version="1.0"; sha256="1a9m6r9cizw42nmy24jdsrsbllg5z84fs8b239axnh1fxzskg2qy"; depends=[MCMCpack]; }; nonlinearICP = derive2 { name="nonlinearICP"; version="0.1.2.1"; sha256="1m9a1f0yrbjl0nx2l7r76pyi78b2bxj8v4jx92yga91f975mw6np"; depends=[caTools CondIndTests data_tree randomForest]; }; nonlinearTseries = derive2 { name="nonlinearTseries"; version="0.2.3"; sha256="1pcah255hh3lqabxgjb5fsaap4s2d92lvxw9a48l1p4dkmm1lbsx"; depends=[Matrix Rcpp rgl TSA tseries]; }; - nonmem2R = derive2 { name="nonmem2R"; version="0.1.8"; sha256="1250y5ylwfc3gwc0ilmzrwzk577bp7pj7bljvamzs3pqy4sflvrv"; depends=[ggplot2 lattice latticeExtra MASS mvtnorm]; }; - nonmemica = derive2 { name="nonmemica"; version="0.7.9"; sha256="0krixfwzxjalmj4b1ln79c1fxxx07qj71gzdddix3p056cdrxlyq"; depends=[csv dplyr encode fold lazyeval magrittr metaplot rlang spec tidyr xml2]; }; + nonmem2R = derive2 { name="nonmem2R"; version="0.1.9"; sha256="06irvlyhfimcx3izbfivvrxc9xbiwvqajvl5n47krgbkbd4r4ag0"; depends=[ggplot2 lattice latticeExtra MASS mvtnorm]; }; + nonmemica = derive2 { name="nonmemica"; version="0.8.2"; sha256="1nz0sq8a1xgpasii2hpxiz79d501nnfs6awaqpp8m8lviimnhv68"; depends=[csv dplyr encode lazyeval magrittr metaplot rlang spec tidyr xml2]; }; nonnest2 = derive2 { name="nonnest2"; version="0.5-1"; sha256="02pflg6frvsq7azwcr660qj9mpj4q3kjx6xr6v5lshg77mjfhgdg"; depends=[CompQuadForm lavaan mvtnorm sandwich]; }; nonpar = derive2 { name="nonpar"; version="1.0.1"; sha256="0pxks3nga7jrcvq0pzr1axj3a9xvzky836fl7966a09ws1vff7i4"; depends=[]; }; nonparaeff = derive2 { name="nonparaeff"; version="0.5-8"; sha256="1kkn68m7cqlzx3v539cjxw3x5a2y86lvmyv2k98s87m3yvqg0gdk"; depends=[gdata geometry Hmisc lpSolve psych pwt rms]; }; @@ -8790,7 +8968,7 @@ in with self; { nordklimdata1 = derive2 { name="nordklimdata1"; version="1.2"; sha256="0c2hbh3qy8nrs275lxpzfgqsfgwp81m4kv0layvnjj09fcybm54x"; depends=[]; }; norm = derive2 { name="norm"; version="1.0-9.5"; sha256="01j1h412yfjx5r4dd0w8rhlf55997spgb6zd6pawy19rgw0byp1h"; depends=[]; }; normalp = derive2 { name="normalp"; version="0.7.0"; sha256="1s12x2qln3s4bbqsm4p3cq4g6461z73r858g6ym1awamhbmncnrl"; depends=[]; }; - normalr = derive2 { name="normalr"; version="0.0.3"; sha256="1ydlp6nbldq7sq60zdlvqah43xdfvx5nyiqaq2m5vgma6yny930x"; depends=[ddR magrittr MASS purrr shiny]; }; + normalr = derive2 { name="normalr"; version="1.0.0"; sha256="1ahrg188vbhnrnwag0zi6lcb3g0y1mbz06sl3j1wyllq5l918cc7"; depends=[magrittr MASS purrr rlang shiny]; }; normtest = derive2 { name="normtest"; version="1.1"; sha256="073r2mwfs6c4vqh8921nlyygl0f20nhv997s0iwf00d3jckkc4pp"; depends=[]; }; normwhn_test = derive2 { name="normwhn.test"; version="1.0"; sha256="1kr45bfydk40hgdg24i2f28cdaw65hg9gmsgv4lsvvr2m3r74vi6"; depends=[]; }; nortest = derive2 { name="nortest"; version="1.0-4"; sha256="17r0wpz72z9312c70nwi1i1kp1v9fm1h6jg7q5cx1mc1h420m1d3"; depends=[]; }; @@ -8813,7 +8991,6 @@ in with self; { npbr = derive2 { name="npbr"; version="1.6"; sha256="1jvq4snwrwjhhjgm8n8yxd5y94ks5zzi0xwdn931yp300qnikyzc"; depends=[Benchmarking np quadprog Rglpk]; }; npcopTest = derive2 { name="npcopTest"; version="1.03"; sha256="1kpa3avi95aa93y038f4zqhhdp8vdscdk0c6397qmqjg34hf1dnr"; depends=[]; }; npcp = derive2 { name="npcp"; version="0.1-9"; sha256="16vzl3psa806ns387d5mhlp369r45ljcqlhl0lzdjpc1niv572nc"; depends=[]; }; - npde = derive2 { name="npde"; version="2.0"; sha256="1cp4k7jvsw9rc6rrck902nqqjaf2c1nxjic7i9r3fd6yca1lgqb9"; depends=[mclust]; }; nplplot = derive2 { name="nplplot"; version="4.5"; sha256="1dpbs0jb34gv0zj528357z1j2pwahjbp04rm7jir6qk0jhyaxxgh"; depends=[]; }; nplr = derive2 { name="nplr"; version="0.1-7"; sha256="1h3qv9dlw2gx8km3slyvrl588nif1n87df8xwmm6p75ziqhn2f56"; depends=[]; }; npmlda = derive2 { name="npmlda"; version="1.0.0"; sha256="1dr25an7cac89jyb8zhmj3ry6lq7sh7zxci1injplnk4gzy17mc5"; depends=[]; }; @@ -8823,7 +9000,7 @@ in with self; { nppbib = derive2 { name="nppbib"; version="1.0-0"; sha256="075jb13zckkh66jwdmdlq4d2drjcc3lkj26px3w79b91223yymf2"; depends=[]; }; npphen = derive2 { name="npphen"; version="1.1-0"; sha256="0pbf9sqdapl5q09g1hj5hi4j2wigrd0b6s0gbv1gx4wn68alrals"; depends=[ks lubridate raster rgdal rts snow]; }; npregfast = derive2 { name="npregfast"; version="1.5.1"; sha256="0s9ci3nybzwykrgi9z2rqp6l15mqbxf759ks0clvkbm7wxv3whk5"; depends=[doParallel foreach ggplot2 mgcv sfsmisc shiny shinyjs wesanderson]; }; - nprobust = derive2 { name="nprobust"; version="0.1.1"; sha256="0aynp42y0qn0jl9f26rk358hjdswkz6anwvni7frxnkb7l1vyrd5"; depends=[ggplot2 Rcpp RcppArmadillo]; }; + nprobust = derive2 { name="nprobust"; version="0.1.2"; sha256="0hc2p30jalaibjwlq8g52rdpifhvmpaq2c7ww0zzhf3h1az442xs"; depends=[ggplot2 Rcpp RcppArmadillo]; }; nproc = derive2 { name="nproc"; version="2.1.1"; sha256="0wpny7c1n9mmv1yywlws8gjbidkrikvcqcckrxpba9avjw2c5df8"; depends=[ada e1071 glmnet MASS naivebayes randomForest ROCR tree]; }; npsf = derive2 { name="npsf"; version="0.3.1"; sha256="1mv2dzn3gc7b9ynpw8dv22xd31igg4hmkgrds12n9920pghkya44"; depends=[Formula Rcpp]; }; npsm = derive2 { name="npsm"; version="0.5"; sha256="12jq6ygp3di5rknh7izrr3bxvpn6bqnj3jhfxzf29yf0bd86hzqk"; depends=[plyr Rfit]; }; @@ -8831,7 +9008,7 @@ in with self; { npst = derive2 { name="npst"; version="2.0"; sha256="1y5ij3nmh9pj6p97jpx75g26sk508mznr0l67cwj381zfb77hj1n"; depends=[]; }; npsurv = derive2 { name="npsurv"; version="0.4-0"; sha256="1wq4c9yfha5azjhrn40iiqkshmvh611sa90jp3lh82n4bl9zfk20"; depends=[lsei]; }; nricens = derive2 { name="nricens"; version="1.5"; sha256="0a7b4kw91qkr9vrm8swflby06a78d059im54zxxgvy42qjsijwqx"; depends=[survival]; }; - nsRFA = derive2 { name="nsRFA"; version="0.7-12"; sha256="182zshwyg0l6shb5wcwibqygxs8qmgma9c4s683za8q3f9l94aqj"; depends=[]; }; + nsRFA = derive2 { name="nsRFA"; version="0.7-13"; sha256="0xa8zm0mk5ckwsmbgdyk8xv1q56pm6j19zxd48rwl3fsqs49bpah"; depends=[]; }; nsROC = derive2 { name="nsROC"; version="1.0"; sha256="0c99z8kknbrnbyyv7p79sj848aq7b5n4m4r7v1yrcs61ackrdn2n"; depends=[sde survival]; }; nscancor = derive2 { name="nscancor"; version="0.6.1-25"; sha256="183kvzlln5lhmi51dm0skq1165c3hhy1yz5h2g7nxwqk2b4p23xj"; depends=[]; }; nscprepr = derive2 { name="nscprepr"; version="0.1.1"; sha256="1rd32zywrzyxz6hpn9s6cwjlg8q8rz3cc0p3b5gan8bicx0ilwjc"; depends=[dplyr lubridate stringr]; }; @@ -8847,6 +9024,7 @@ in with self; { numKM = derive2 { name="numKM"; version="0.1.0"; sha256="0pnwb7skp5jx5ibgfkympq59m9sf71gvk5zc0fwik539vrzfykdf"; depends=[survival]; }; numOSL = derive2 { name="numOSL"; version="2.3"; sha256="1bcj1qk3nx1jqhldx9rcwphvlxspz3bj4vb891hkw2fa2i4559c5"; depends=[]; }; numbers = derive2 { name="numbers"; version="0.6-6"; sha256="05qmv12b90vkzf2b50qjnp8hja6rms91jj97knx70n2yhpb2lnd9"; depends=[]; }; + numbersBR = derive2 { name="numbersBR"; version="0.0.2"; sha256="0ihxlny745gpz1ngq862rydn1zwn8zni1xw9mmgw8hkylsrnjfq8"; depends=[stringr]; }; numform = derive2 { name="numform"; version="0.4.0"; sha256="09vim4ajnnkdf27ag5j8pj7p8qyfakfh3ar1dki8bqzms2d7bkcm"; depends=[]; }; nutshell = derive2 { name="nutshell"; version="2.0"; sha256="1v11g5wqyxnj29b7akl0cwa34hcqs79ijbiv735pg3df4ggyrzvm"; depends=[nutshell_audioscrobbler nutshell_bbdb]; }; nutshell_audioscrobbler = derive2 { name="nutshell.audioscrobbler"; version="1.0"; sha256="10fvc5d22gnfb0bkgbww48f0vvcaja96g5gfv85kap939j11172j"; depends=[]; }; @@ -8881,22 +9059,20 @@ in with self; { odds_converter = derive2 { name="odds.converter"; version="1.4"; sha256="13y3s04l2jvjhn1i4syz4y3q42ba8br0sp3mks5f5h4cp8w4j3wy"; depends=[]; }; oddsratio = derive2 { name="oddsratio"; version="1.0.2"; sha256="0s9w5iqcabkc7lqdh27nmg7xnw2jpwik5djjlqxb6xgabzls97d6"; depends=[cowplot ggplot2 MASS mgcv]; }; odeintr = derive2 { name="odeintr"; version="1.7.1"; sha256="0wfb5lgv10p0qyfbn9hdg14bda37v43lpgbwv6nbw63zzbsbazqi"; depends=[BH Rcpp]; }; - odfWeave = derive2 { name="odfWeave"; version="0.8.4"; sha256="1rp9j3snkkp0fqmkr6h6pxqd4cxkdfajgh4vlhpz56gr2l9j48q5"; depends=[lattice XML]; }; - odfWeave_survey = derive2 { name="odfWeave.survey"; version="1.0"; sha256="0cz7dxh1x4aflvfrdzhi5j64ma5s19ma8fk9q2m086j11a1dw3jn"; depends=[odfWeave survey]; }; odk = derive2 { name="odk"; version="1.5"; sha256="0fcnr4c1clwx1sk6fgg4cx506gdi90n2h05g0i47p4s5bra0qwwl"; depends=[gsheet openxlsx]; }; odkr = derive2 { name="odkr"; version="0.1.3"; sha256="0vcpsykr4sq4rq721vyd3wbm4jzlldvvxqh75q7x7wwhjhrnr3qn"; depends=[Hmisc stringr]; }; odpc = derive2 { name="odpc"; version="1.0.0"; sha256="1mhak9drp0a7h1yrbk08cs00hbvkfkj8r1y6klhr40sdych4q506"; depends=[forecast gdpc Rcpp RcppArmadillo]; }; odr = derive2 { name="odr"; version="0.7.3"; sha256="07jfd809wv92ijgw1r1nq9516zi2rkf3ik243br42glf6lszn19p"; depends=[]; }; oec = derive2 { name="oec"; version="2.5.2"; sha256="17np562cv6ln3j4b9iawyhbz8kfd5cy1ifj96kzyhv082jgpsk1s"; depends=[dplyr jsonlite magrittr readr servr]; }; - oem = derive2 { name="oem"; version="2.0.7"; sha256="12z6cgkm8yyk9dz3s1bswccn7vrvca2wiqz0ylr65q88ws828snz"; depends=[BH bigmemory foreach Matrix Rcpp RcppArmadillo RcppEigen]; }; - officer = derive2 { name="officer"; version="0.2.1"; sha256="0l8xj6zsklh2dyl6kn4piv5wjalqm1ifakxh31zfz714s9w0y8qj"; depends=[base64enc digest htmltools magrittr R_utils R6 Rcpp uuid xml2 zip]; }; + oem = derive2 { name="oem"; version="2.0.8"; sha256="08j9y9vq31skvdpg0kyqj50d77aijd2d95vcwm92df5vcvw9bpwz"; depends=[BH bigmemory foreach Matrix Rcpp RcppArmadillo RcppEigen]; }; + officer = derive2 { name="officer"; version="0.2.2"; sha256="1yixvlcz7mnf3w5kixd14zi0sa6vvydiqvlsnvj0zll8vplmcsij"; depends=[base64enc digest htmltools magrittr R_utils R6 Rcpp uuid xml2 zip]; }; oglmx = derive2 { name="oglmx"; version="2.0.0.3"; sha256="02skdnf89ryl4d8ja1a9mj1jzzmjqjgfdcsf6v5dpjn1z9aycc6c"; depends=[maxLik]; }; ohtadstats = derive2 { name="ohtadstats"; version="1.0"; sha256="1wpil3ag7vzinz4ky7jpzny88a4ycfifbhayyib9cldk8d0mbcgh"; depends=[lattice]; }; oii = derive2 { name="oii"; version="1.0.2.1"; sha256="1n41hikn53ikyynsravg127cw5csa8s0s1l63w5hym7c6j625ya5"; depends=[Deducer gmodels rapportools]; }; okcupiddata = derive2 { name="okcupiddata"; version="0.1.0"; sha256="1l04rr4yr73a6q2am9ylyr5prf347hkf2jx735w78rsb6472kbaq"; depends=[]; }; okmesonet = derive2 { name="okmesonet"; version="0.1.5"; sha256="1kzyzmg702ayzphn9jsk64m51mlnz37ylxiwq5gsr23vaiida680"; depends=[plyr]; }; olctools = derive2 { name="olctools"; version="0.3.0"; sha256="1gbchwynvmryarz32f24v56kj57h7x6nrrm878fkjkpq140cqwzz"; depends=[Rcpp]; }; - olsrr = derive2 { name="olsrr"; version="0.4.0"; sha256="0ka8a6gm4ynbr2ss4syw2znnqcjly209sh992shyzp01yp5vy7bm"; depends=[dplyr ggplot2 glue goftest gridExtra magrittr nortest purrr Rcpp recipes rlang shiny stringr tibble tidyr]; }; + olsrr = derive2 { name="olsrr"; version="0.5.0"; sha256="1id5z628bq91p3w64mq28bk247i6vb9ly1maqpf6fsfqiq2pavmv"; depends=[cli clisymbols crayon dplyr ggplot2 gh glue goftest gridExtra magrittr nortest purrr Rcpp recipes rlang shiny stringr tibble tidyr]; }; omd = derive2 { name="omd"; version="1.0"; sha256="0s1wcgivqapbkzjammga8m12gqgw113729kzfzgn02nsfzmsxspv"; depends=[]; }; omics = derive2 { name="omics"; version="0.1-5"; sha256="1y2x33mfgq98nglhvpr1wq1v6nfiq4njy2yac47x72rpwxsj9vb1"; depends=[lme4 pheatmap]; }; ompr = derive2 { name="ompr"; version="0.7.0"; sha256="06zhmddg19sjnl18zmjjswggjg58rjgarqj2wqf5jf0g0qz3my2n"; depends=[dplyr lazyeval Matrix progress Rcpp]; }; @@ -8915,13 +9091,14 @@ in with self; { ontologySimilarity = derive2 { name="ontologySimilarity"; version="2.2"; sha256="1g1ag2bnfczdx2xyswrc9xbl9krnyibb4639wynm7c0lf2876964"; depends=[ontologyIndex Rcpp]; }; oompaBase = derive2 { name="oompaBase"; version="3.2.5"; sha256="0269jmdw236jy008ic6iwg9y2fq674alqvd5zdvy1k2grxm72hvw"; depends=[cluster]; }; oompaData = derive2 { name="oompaData"; version="3.1.1"; sha256="0by9qfxlx6fdmp12qnphlli5hdn5balvx4ckg64fw6vwa291g7b0"; depends=[]; }; - openEBGM = derive2 { name="openEBGM"; version="0.4.0"; sha256="0293cy1p3nh4q37qjjkzxivk6lw5sqs6n93hlmvr93ywz4h4wvyf"; depends=[data_table ggplot2]; }; + openCR = derive2 { name="openCR"; version="1.1.1"; sha256="0dmjisnxn9hdi2a4pb7qy367g4lmmlvnc8sll55dzjir472c3zm1"; depends=[abind MASS nlme plyr Rcpp secr stringr]; }; + openEBGM = derive2 { name="openEBGM"; version="0.5.0"; sha256="079wy3xrfdcmn0wd314rlrf4499qpdhsfq1m4b7s5y9c21h0raiy"; depends=[data_table ggplot2]; }; openNLP = derive2 { name="openNLP"; version="0.2-6"; sha256="1173cng877sg6ynbs3csfnn956wwrq3yldhhzfbqdsz35draganj"; depends=[NLP openNLPdata rJava]; }; openNLPdata = derive2 { name="openNLPdata"; version="1.5.3-4"; sha256="0j45rh9qki8r5wavaysrfsvb3wc3x8jjicqff2yi0r34j58xvlv8"; depends=[rJava]; }; openSTARS = derive2 { name="openSTARS"; version="1.0.0"; sha256="0arry24nkd50nkdnddzxagrpy4lky9smc4xr1nl6q9nwxyfgdskg"; depends=[data_table progress raster rgdal rgrass7 sp SSN]; }; openVA = derive2 { name="openVA"; version="1.0.3"; sha256="09wbhl0g6q1rhi6yr3wpbns4ik7jalpagacn6am09i6zvmz8745j"; depends=[ggplot2 InSilicoVA InterVA4 nbc4va Tariff]; }; openadds = derive2 { name="openadds"; version="0.2.0"; sha256="1jb8zd3rpxfkjkg895iab6m4cfi53p5vy3nnpjkgq7ym6499qjcv"; depends=[crul dplyr jsonlite maptools rappdirs readr tibble xml2]; }; - openair = derive2 { name="openair"; version="2.2-3"; sha256="0gp5q84r6psqd3900f74dm0qgiig6vhnm5400nbwjm0arp1jlyp7"; depends=[cluster dplyr hexbin lattice latticeExtra lubridate mapproj MASS mgcv purrr RColorBrewer Rcpp rlang tidyr]; }; + openair = derive2 { name="openair"; version="2.3-0"; sha256="0kfikssvmdg1r7j1z80hw7pa66rs06cki211rhmv0f12m500zl0c"; depends=[cluster dplyr hexbin lattice latticeExtra lubridate mapproj MASS mgcv purrr RColorBrewer Rcpp rlang tidyr]; }; opencage = derive2 { name="opencage"; version="0.1.4"; sha256="1lqs38lml73axsjlsjkmcsb2irgs40mjrx2cn3k0bjb63qyb9hf5"; depends=[dplyr httr jsonlite memoise]; }; opencpu = derive2 { name="opencpu"; version="2.0.5"; sha256="1bs2z3y2zc3aqzfjh6bq3qrpzm106f5xhw7lbyng1bpcp4rch6y3"; depends=[brew curl devtools evaluate httpuv jsonlite knitr mime openssl protolite rappdirs sendmailR sys webutils zip]; }; opendotaR = derive2 { name="opendotaR"; version="0.1.4"; sha256="17cygsw3nkg6zincfrcdh1509rlz3n5zrv9wvv7mjngm61sn79nf"; depends=[dplyr jsonlite lubridate]; }; @@ -8967,7 +9144,7 @@ in with self; { orQA = derive2 { name="orQA"; version="0.2.1"; sha256="0vivjrpcbql42y078gi91kfpfdpv73j23jkiv8fpazzwzdi8ydqq"; depends=[genefilter gtools nlme Rcpp]; }; ora = derive2 { name="ora"; version="2.0-1"; sha256="0albxqma220rnrpfdq3z9cawr83q1a0zzczbbcy4nijjm4mswphy"; depends=[DBI ROracle]; }; orca = derive2 { name="orca"; version="1.1-1"; sha256="1wd5nh2vh6j1rp78hbw17qipi67f0wimrbkiarak8f7k5pfiy1zn"; depends=[]; }; - orclus = derive2 { name="orclus"; version="0.2-5"; sha256="0kkxhyqjxib862npinzf3mipqg5imgscdmb5wqm8wf2j2mbislsx"; depends=[]; }; + orclus = derive2 { name="orclus"; version="0.2-6"; sha256="0d78mn2vl2yxlvdswyxkxp9zg59b8cvfksz9m56kddn79aps1ikl"; depends=[]; }; orcutt = derive2 { name="orcutt"; version="2.2"; sha256="0mwfbbsn39nla083p845xbbgh3y8kkrg0q735kap64jf4pgcyac7"; depends=[lmtest]; }; ordBTL = derive2 { name="ordBTL"; version="0.8"; sha256="09x3zfmss4fsh3rjghgmpv8y34dnkz4mw696b3k3nvlgk55a1423"; depends=[caret gtools VGAM wikibooks]; }; ordDisp = derive2 { name="ordDisp"; version="1.0.1"; sha256="1vjki73h8933z36ikwmjn84ldz154mahp2jkd9cbj5n6xsi47fnw"; depends=[VGAM]; }; @@ -8978,11 +9155,12 @@ in with self; { orderedLasso = derive2 { name="orderedLasso"; version="1.7"; sha256="0vrh89nrmpi8xscvambcb1y70gqqi5819a2gxh02h4pnyjn8axql"; depends=[ggplot2 Iso Matrix quadprog reshape2]; }; orderstats = derive2 { name="orderstats"; version="0.1.0"; sha256="0a3ga0cjryvbininspsx5wzc96s3fza06s3d5fhbllbixz0rap4a"; depends=[]; }; ordiBreadth = derive2 { name="ordiBreadth"; version="1.0"; sha256="04faqhas1p9lxhghd4xq07yq1nxv7ns18avhvkql7sy5a9g7bfs1"; depends=[vegan]; }; - ordinal = derive2 { name="ordinal"; version="2015.6-28"; sha256="0lckjzjq2k8rlibrjf5s0ccf17vcvns5pgzvjjnl3wibr2ff4czs"; depends=[MASS Matrix ucminf]; }; + ordinal = derive2 { name="ordinal"; version="2018.4-19"; sha256="04fpm4jsjfd90ig2rzd11jafkip74814b60ixis0sii2gr9c8zxb"; depends=[MASS Matrix ucminf]; }; ordinalClust = derive2 { name="ordinalClust"; version="1.2.1"; sha256="1035471ni5f8129w23kkj7263p5pa9jlihqdq2skda410lj50vnk"; depends=[progress Rcpp RcppArmadillo]; }; ordinalCont = derive2 { name="ordinalCont"; version="1.3.0"; sha256="0zi9cfvkb811hhcplp159zpnmmk4rs0nid19gi4g9g3dgn9pa296"; depends=[boot]; }; ordinalForest = derive2 { name="ordinalForest"; version="2.1"; sha256="1ancr7xdwhbqq3rj5hijrkjbrcaih8rqcx5r41mykrrp1k1s55dd"; depends=[combinat ggplot2 Rcpp]; }; ordinalNet = derive2 { name="ordinalNet"; version="2.4"; sha256="0c9k3p62d482sl0vg94xm6hllk2mic2nd1c5m4vhci5ycavqzdd3"; depends=[]; }; + ordinalRR = derive2 { name="ordinalRR"; version="1.0"; sha256="07gihg8hppxa7bp5wxcshqawj3vkzicmdsrnjyrasr3glv08b9lj"; depends=[rjags]; }; ore = derive2 { name="ore"; version="1.6.0"; sha256="115s3wq7rrpmx65k9jlpf2x1d218gnl7vsc8zsvmjbsi4gfyliwf"; depends=[]; }; ores = derive2 { name="ores"; version="0.3.1"; sha256="12war455cfcn2llig7pkx05b70dp5y7warjq03ayqq6i7c945mhb"; depends=[httr]; }; orgR = derive2 { name="orgR"; version="0.9.0"; sha256="1q4qbwnbhmja8rqiph7g7m4wxhzhk9mh91x1jgbnky8bs4ljdgrx"; depends=[data_table ggplot2 ggthemes lubridate stringr]; }; @@ -8997,7 +9175,7 @@ in with self; { oro_pet = derive2 { name="oro.pet"; version="0.2.6"; sha256="1dczii7knh9241ksswxk9zg1d69mhk2ilrk4kjv7cj9nfm8fgmja"; depends=[minpack_lm msm oro_dicom oro_nifti]; }; orsifronts = derive2 { name="orsifronts"; version="0.1.1"; sha256="1js4q2s1mn263x8szl5q47ajfxv9lsjd5zyphwyhbkqrnd8ijd3w"; depends=[sp]; }; orsk = derive2 { name="orsk"; version="1.0-3"; sha256="0j8bz5kddzglcljycxy8lv8h5f6hvz88nzwq3b9cdyayd8mlbxs2"; depends=[BB BHH2]; }; - orthoDr = derive2 { name="orthoDr"; version="0.3.0"; sha256="14z3zl6hvvvsm3q9slwl4sfnzd5igsgdycimg0ww3xg2nw7hln4l"; depends=[plot3D pracma Rcpp RcppArmadillo rgl survival]; }; + orthoDr = derive2 { name="orthoDr"; version="0.5.1"; sha256="0zpi3g6pkid40cblzsxck254wxljn5bfs354l51xfb182qr76x6k"; depends=[dr MASS plot3D pracma Rcpp RcppArmadillo rgl survival]; }; orthogonalsplinebasis = derive2 { name="orthogonalsplinebasis"; version="0.1.6"; sha256="07rbd0fhs2gsk7wj41y2h7wf6pfg324vzv2al753d8kqyx5ns2dj"; depends=[]; }; orthopolynom = derive2 { name="orthopolynom"; version="1.0-5"; sha256="1gvhqx6jlh06hjmkmbsl83gri0gncrm3rkliyzyzmj75m8vz993d"; depends=[polynom]; }; osDesign = derive2 { name="osDesign"; version="1.7"; sha256="0y68pnsmq4nlmfsn28306q2kxab200pirr6ha0w4himzpnw1sil3"; depends=[]; }; @@ -9009,7 +9187,8 @@ in with self; { osmdata = derive2 { name="osmdata"; version="0.0.6"; sha256="1sjaqsj0jxipg00raj20gszzjspgpy9ja37rfkx6jpaa2wh3ii87"; depends=[curl httr jsonlite lubridate magrittr Rcpp rvest sp xml2]; }; osmose = derive2 { name="osmose"; version="0.1.1"; sha256="0fiijnrvvydhj6j9yb02rn5sg8arcpj3jz977m2zwjgqy878cffg"; depends=[rlist stringr]; }; osmplotr = derive2 { name="osmplotr"; version="0.3.0"; sha256="0w45riwwjigh1bxf9gx0wdj2yhdizwi6ydprp83pss2z9wph66yb"; depends=[curl e1071 ggm ggplot2 httr osmdata rgeos sp spatstat]; }; - osrm = derive2 { name="osrm"; version="3.1.0"; sha256="12gbgjp3hq0vg0wf6xq0l9wgq0h6w4l0bfwmlnyhq26z9n08a1lq"; depends=[gepaf jsonlite raster RCurl rgeos sp]; }; + osrm = derive2 { name="osrm"; version="3.1.1"; sha256="14rf5m2pm5w414v2l1dvd6vlvirms93l8rkfbmgcvxwxmc52b187"; depends=[gepaf jsonlite raster RCurl rgeos sp]; }; + osrmr = derive2 { name="osrmr"; version="0.1.28"; sha256="0db8db7hkpc3rl7193gldmjz6ikm2m21d11ff9jmf7l8x0shg38i"; depends=[assertthat bitops R_utils rjson stringr]; }; otinference = derive2 { name="otinference"; version="0.1.0"; sha256="1l75jjnkyk8yzaw9zyk45jq9ys304i6pzm2xd5apxrb1jk75a3li"; depends=[MASS Rglpk sm transport]; }; otrimle = derive2 { name="otrimle"; version="1.1"; sha256="0c3wlj6cxpikrfr0knldd1z2kfihpfsppnyb9n3rflnxhk7pwij2"; depends=[doParallel foreach mclust]; }; otvPlots = derive2 { name="otvPlots"; version="0.2.0"; sha256="1halgpk5ld5ihz0da69wf72l0624r73h2wjc0zjn8b8kw1v9xgzs"; depends=[data_table ggplot2 gridExtra Hmisc moments quantreg scales stringi]; }; @@ -9034,7 +9213,7 @@ in with self; { pKSEA = derive2 { name="pKSEA"; version="0.0.1"; sha256="1k9javxbhx28hf5k3i66ggqwlws2w9qwp01g8f7jmyp92pxr3qqd"; depends=[]; }; pMineR = derive2 { name="pMineR"; version="0.31"; sha256="1j71dcldzmk4kzspx4v5s3vqqkllgwkckfm1g145qgg26c1gyc6l"; depends=[cluster DiagrammeR stringr XML]; }; pRF = derive2 { name="pRF"; version="1.2"; sha256="17srabk7mam16rdzc5g9ggdrhjjk8wibny40gxvgzkv7qgq7m80x"; depends=[dplyr ggplot2 multtest permute randomForest reshape2]; }; - pROC = derive2 { name="pROC"; version="1.10.0"; sha256="0rm08hf2gxqn5b83ara733w5nihkg1jmdilz67zzrc9iwmqznfa0"; depends=[ggplot2 plyr Rcpp]; }; + pROC = derive2 { name="pROC"; version="1.11.0"; sha256="1v61z529yj1bp7wcagyhx0jszla9hv0aq1zvxz9w19r7lcinlzjz"; depends=[ggplot2 plyr Rcpp]; }; pRSR = derive2 { name="pRSR"; version="3.1.1"; sha256="1irx95b7cwvx3gpn9brjjn4k947m8frz542r18nilc9f1159mb3s"; depends=[]; }; pSI = derive2 { name="pSI"; version="1.1"; sha256="0cvw38dqqlyx7cpl27hq33f5xns2d0019lyr98pwndcnbp09mx0b"; depends=[gdata]; }; pa = derive2 { name="pa"; version="1.2-1"; sha256="1pfgzxirkb0p8f6smjlrbp1qpsh0vsvqf306cvldaj9zx8cw0q9f"; depends=[ggplot2]; }; @@ -9046,10 +9225,10 @@ in with self; { packagedocs = derive2 { name="packagedocs"; version="0.4.0"; sha256="0zw9ana7s42ardphhdaklba02yjj1v8gliq4l98397mjmzc6f4xd"; depends=[crayon devtools digest evaluate highlight htmltools lazyrmd magrittr rmarkdown stringr whisker yaml]; }; packagetrackr = derive2 { name="packagetrackr"; version="0.1.1"; sha256="0xjq27j7bd7lps0vp9gdinxn19wl10k2cp9wb2xjih7p6l0wd57g"; depends=[dplyr httr magrittr rappdirs]; }; packcircles = derive2 { name="packcircles"; version="0.3.1"; sha256="0f2y651i96sa7b7mfxg5kinmhhzvcv18lia74fdpdnmc6fxlxg17"; depends=[Rcpp]; }; - packrat = derive2 { name="packrat"; version="0.4.9"; sha256="1l0p59h0w0qdg5vlgq93932hpkidg6kd9cwg3ckn3vwms4sh2p7x"; depends=[]; }; + packrat = derive2 { name="packrat"; version="0.4.9-1"; sha256="1kk6hs88y5jqgd781kk5jn5467r7sfyqd225vibflbz0s42rcv5a"; depends=[]; }; pacman = derive2 { name="pacman"; version="0.4.6"; sha256="1vdak1hv3j44dsj6cckzc1a86dg933jqhxdys8fyxacmk101l388"; depends=[devtools]; }; paco = derive2 { name="paco"; version="0.3.2"; sha256="0qf692fqlq0d7hh9yllywaswmj5spy6q1r67nzkhgyh311nhjh6c"; depends=[plyr vegan]; }; - pacotest = derive2 { name="pacotest"; version="0.2.2"; sha256="0n17qzn7wabs6am55z96zg8759fdcz3vpm7yx25dyaqliawgqnj7"; depends=[ggplot2 gridExtra numDeriv Rcpp RcppArmadillo VineCopula]; }; + pacotest = derive2 { name="pacotest"; version="0.3"; sha256="135637bidfx71xay6c69lfjvr4i0v3ckgkg0fi838p24is6icbix"; depends=[ggplot2 gridExtra numDeriv Rcpp RcppArmadillo VineCopula]; }; pact = derive2 { name="pact"; version="0.5.0"; sha256="043hbydj5f6889xrfsrn8jrgid2nnbsz6d7jpn4hywwa97snw4ny"; depends=[glmnet survival]; }; padr = derive2 { name="padr"; version="0.4.0"; sha256="1liks4cj1cyzf6ls2h8f68xd7nry6y9ml3zdmw1fsax251dhmbq4"; depends=[dplyr lubridate Rcpp rlang]; }; paf = derive2 { name="paf"; version="1.0"; sha256="0wrqn67jfrjjxwcrkka6dljgi3mdk00vfjkzzcv2v7c97gx1zvwn"; depends=[survival]; }; @@ -9084,6 +9263,7 @@ in with self; { pandocfilters = derive2 { name="pandocfilters"; version="0.1-1"; sha256="18n155rkbr3gq5lsb0bh1v1v0z0r6xr2ald3nh7xh3v9qwxpmsz1"; depends=[jsonlite]; }; panelAR = derive2 { name="panelAR"; version="0.1"; sha256="1ka2rbl9gs65xh2y2m4aqwh5qj4szibjy101hqfmza9wmdh25gpq"; depends=[car]; }; panelaggregation = derive2 { name="panelaggregation"; version="0.1.1"; sha256="0x8ldqb9216pclfvs4ymdpian43v2ydkyflpf0k6lcn35r04xfr6"; depends=[data_table]; }; + panelvar = derive2 { name="panelvar"; version="0.5.1"; sha256="1394lvvpzbcvm2mhxw68k784jyvsnzxiq787kdf4y4538lqgfx1n"; depends=[ggplot2 knitr MASS Matrix matrixcalc progress reshape2 texreg]; }; pangaear = derive2 { name="pangaear"; version="0.6.0"; sha256="0dykacf5ckhck08rbk6l5kyw51i2p1ncy44agcxj79cr290cd5ck"; depends=[crul jsonlite oai png rappdirs tibble xml2]; }; papayar = derive2 { name="papayar"; version="1.0"; sha256="11vkjhazfwfixsr6dba5jrcsr3r3mqgvj5s070b4gp70d6k1z8s5"; depends=[htmltools neurobase oro_nifti servr]; }; papeR = derive2 { name="papeR"; version="1.0-2"; sha256="1pp6zzdqg9lj61f8p90sxl30vp9knmis7154fmfpm6pynbgr46ms"; depends=[car gmodels xtable]; }; @@ -9095,7 +9275,7 @@ in with self; { parallelMap = derive2 { name="parallelMap"; version="1.3"; sha256="026d018fr2a43cbh8bi2dklzr9fxjzdw5qyq84g2i18v5ibr6bd5"; depends=[BBmisc checkmate]; }; parallelSVM = derive2 { name="parallelSVM"; version="0.1-9"; sha256="0nhxkllpjc3775gpivj8c5a9ssl42zgvswwaw1sdhwg3cxcib99h"; depends=[doParallel e1071 foreach]; }; parallelize_dynamic = derive2 { name="parallelize.dynamic"; version="0.9-1"; sha256="03zypcvk1iwkgy6dmd5bxg3h2bqvjikxrbzw676804zi6y49mhln"; depends=[]; }; - paramGUI = derive2 { name="paramGUI"; version="2.1.2"; sha256="054l9hqsvgnwipzqrapkhsk67afz93zv1cligqhjl2wggzn9a8sc"; depends=[colorspace fields shiny shinydashboard TIMP]; }; + paramGUI = derive2 { name="paramGUI"; version="2.1.3"; sha256="1z7k4wgzm1bga8djyk44r1kr1mzdb9mrd6fvb5nrd69d76pvldji"; depends=[colorspace fields shiny shinydashboard TIMP]; }; paramlink = derive2 { name="paramlink"; version="1.1-2"; sha256="0y6wsrxwyavipmrjjznr2n920w0p6qlwapxc9mnkh9c6w3yznka2"; depends=[assertthat kinship2 maxLik]; }; params = derive2 { name="params"; version="0.6.1"; sha256="0w7k8k7z8p1y2w0dhpfssa868xaikfzfdjw2vlj1yl299k5yisax"; depends=[whisker]; }; paramtest = derive2 { name="paramtest"; version="0.1.0"; sha256="0yn1s1qkgby8x0qn7cy1zhxzc0wyi7bm30pkvijhn5h5afjpylsy"; depends=[boot]; }; @@ -9107,7 +9287,7 @@ in with self; { parlitools = derive2 { name="parlitools"; version="0.2.1"; sha256="14nzcbjddwnsiwwksl7bf2qk1kzzcnjc0b47ilqiq4nc4c386im3"; depends=[dplyr hansard httr jsonlite mnis sf stringi tibble]; }; parma = derive2 { name="parma"; version="1.5-3"; sha256="0yjpmxz20v6k107qylw42yf1b231hzym9dizjcq1kalivvscczc5"; depends=[corpcor nloptr quadprog Rglpk slam truncnorm]; }; parmigene = derive2 { name="parmigene"; version="1.0.2"; sha256="1fsm6pkr17jcbzkj1hbn91jf890fviqk1lq6ls8pihsdgah1zb4d"; depends=[]; }; - parsec = derive2 { name="parsec"; version="1.1.2"; sha256="1hf3c23rnxckw4s2vqzbhkjgiir1nv1811saximj0mbih9w2vqpf"; depends=[]; }; + parsec = derive2 { name="parsec"; version="1.2.0"; sha256="0ilc9d6kv7zb0kwhpqqi3bjx3r1cihyfamphrw83p6zy3xhfmfs6"; depends=[igraph]; }; parsedate = derive2 { name="parsedate"; version="1.1.3"; sha256="0mg7hbm3903iwvmpn51gjpaaq03rsp72hjb1g8h5g84r81iha002"; depends=[]; }; parsemsf = derive2 { name="parsemsf"; version="0.1.1"; sha256="0ks4503k06ib5lq4ar2rg0sdni99rjcqxj76b0mclasxbi07kjsa"; depends=[DBI dbplyr dplyr lazyeval RSQLite stringr tidyr]; }; partDSA = derive2 { name="partDSA"; version="0.9.14"; sha256="1kp0cdsdjiay349jz22iqfzvspny8s343cfan8xahgf931k9h8p6"; depends=[survival]; }; @@ -9127,13 +9307,13 @@ in with self; { pass = derive2 { name="pass"; version="1.0"; sha256="00dzwg2lnzmrrmzq3fyrs4axswgnsn7f62l2f2a8d8gyf8qzz3nf"; depends=[lars MASS ncvreg]; }; passport = derive2 { name="passport"; version="0.2.0"; sha256="1jiwivrz7781zmwxmw13rxl80cr9r5pinnk5bvqz8nhfmlx0zmgd"; depends=[]; }; password = derive2 { name="password"; version="1.0-0"; sha256="1ijzqdw54l8wvpy6ys28njvhplzjxzzi5i9y41vjnrr88n13977v"; depends=[]; }; - pastecs = derive2 { name="pastecs"; version="1.3-18"; sha256="0ixlnc1psgqgm71bsf5z5j65lvr92ghpsk9f1ifm94dzjhi6d22i"; depends=[boot]; }; + pastecs = derive2 { name="pastecs"; version="1.3.21"; sha256="0z4dic94ar646w7zc2ggi5hgvf2qnznsani94c5pyql8zspz47lc"; depends=[boot]; }; pastis = derive2 { name="pastis"; version="0.1-2"; sha256="0211pzj3xrmqgxjpspij95kmlpa2klpicw49n6pnz2g1fapjy2bd"; depends=[ape caper]; }; patPRO = derive2 { name="patPRO"; version="1.1.0"; sha256="1l6q6glklmfgivs4gw0v8q4qa57wr2bna477sn2v401hcwmgnfyn"; depends=[ggplot2 gridExtra plyr RColorBrewer reshape2]; }; patchDVI = derive2 { name="patchDVI"; version="1.9.1616"; sha256="1akdlzw8v2p1zz09bm88d63jyxj7fv5h50p459p9ml4yc816xvji"; depends=[]; }; patchPlot = derive2 { name="patchPlot"; version="0.1.5"; sha256="1b4k0dvvj6qwyxbqb36knyrawvy5qq8hl45pz896c9rkqhlg02bx"; depends=[datautils]; }; patchSynctex = derive2 { name="patchSynctex"; version="0.1-4"; sha256="1li3kw7a77sx6dss8pnxzb0p0sdy1kfm1zdnmhhj043zihrryd5p"; depends=[stringr]; }; - patentsview = derive2 { name="patentsview"; version="0.2.0"; sha256="1n599ksd4vdpfxdlq8bfc0h94v76qbsrrpd5p0q1c6cl083fvvzq"; depends=[httr jsonlite]; }; + patentsview = derive2 { name="patentsview"; version="0.2.1"; sha256="104qq6cqvfk5m2yynpg5iwlp89y5qx18m20qp343mknxjbvqpjdg"; depends=[httr jsonlite]; }; pathClass = derive2 { name="pathClass"; version="0.9.4"; sha256="1vzmz3bml37wfxsjhkw9fip90sr1iv521ccr7nlf6xd30wavqywk"; depends=[affy Biobase igraph kernlab lpSolve ROCR svmpath]; }; pathdiagram = derive2 { name="pathdiagram"; version="0.1.9"; sha256="1j2h9mmwfi95nwhk9214kcfpb1qrmw249mjaza7i9gijmlicraxz"; depends=[shape]; }; pathfindR = derive2 { name="pathfindR"; version="1.0.0"; sha256="1wwl7cxgdrvcyrzyv1jrhhp850fc512585ih5g24jmrfr6n0422h"; depends=[AnnotationDbi DBI doParallel foreach knitr org_Hs_eg_db pathview rmarkdown shiny]; }; @@ -9152,11 +9332,11 @@ in with self; { pbdBASE = derive2 { name="pbdBASE"; version="0.4-5.1"; sha256="0ghdq8ry6fiq8qj3plq2n8isjx6iacnhqd1z73bjckmvp99g221n"; depends=[pbdMPI pbdSLAP]; }; pbdDEMO = derive2 { name="pbdDEMO"; version="0.3-1"; sha256="0vr3dvvhr8j6xvdf308nn37y0lkl2ysm93yf0h7rclvqvsk1pf66"; depends=[pbdBASE pbdDMAT pbdMPI]; }; pbdDMAT = derive2 { name="pbdDMAT"; version="0.4-2"; sha256="1xiwfpi8r0l8jlfrc35aknm09y4qbn0hvvkscdpcxv9q7zifvl3v"; depends=[pbdBASE pbdMPI]; }; - pbdMPI = derive2 { name="pbdMPI"; version="0.3-4"; sha256="05b0f8hqnn5wrmxg1yjd60h5v0hys7bvzb9brgbsxp1nbsashqq9"; depends=[rlecuyer]; }; + pbdMPI = derive2 { name="pbdMPI"; version="0.3-5"; sha256="1i970p74j53bnvqwv4ac03i7rbwp9ixbq1qbcv2x878wwz6fkcc2"; depends=[rlecuyer]; }; pbdNCDF4 = derive2 { name="pbdNCDF4"; version="0.1-4"; sha256="0fd29mnbns30ck09kkh53dgj24ddrqzks4xrrk2hh1wiy7ap1h95"; depends=[]; }; pbdPROF = derive2 { name="pbdPROF"; version="0.3-1"; sha256="0a7c31605si062vbwcwngv770axlwyhh00cvdfqw3hv421p61sj8"; depends=[]; }; pbdRPC = derive2 { name="pbdRPC"; version="0.2-0"; sha256="0qndlgv6r9k17mz75g7d2k5alg0qp5h7scpnz2zl6kqlpr8z6l2p"; depends=[]; }; - pbdSLAP = derive2 { name="pbdSLAP"; version="0.2-3"; sha256="1famaxkm385ka7kgk997lvkb68cpch0vb26l94vzkhxwfxl0fyjp"; depends=[pbdMPI rlecuyer]; }; + pbdSLAP = derive2 { name="pbdSLAP"; version="0.2-4"; sha256="0wl8iir00nyb4j0sm8nssmgb2xhr8g2064pql0s72cgbzkq1k1cm"; depends=[pbdMPI rlecuyer]; }; pbdZMQ = derive2 { name="pbdZMQ"; version="0.3-2"; sha256="0dzwwffinn9bbb73dmmh88c374f9057bl0a8dq97fbv63j4a5qpc"; depends=[]; }; pbivnorm = derive2 { name="pbivnorm"; version="0.6.0"; sha256="05jzrjqxzbcf6z245hlk7sjxiszv9paadaaimvcx5y5qgi87vhq7"; depends=[]; }; pbkrtest = derive2 { name="pbkrtest"; version="0.4-7"; sha256="1si3bhi59xc51a0pgjjglccq3h4aljyhw2k1b8574s145fnh7fsw"; depends=[lme4 MASS Matrix]; }; @@ -9182,7 +9362,7 @@ in with self; { pcr = derive2 { name="pcr"; version="1.1.0"; sha256="1rz9jxjs9s7kwg3aljfm1x2v7jsg94wawmhgs8va83g46pbl26g8"; depends=[broom devtools dplyr ggplot2 magrittr purrr readr tidyr]; }; pcrcoal = derive2 { name="pcrcoal"; version="1.2.0"; sha256="0rd610ny8p7by3gi6kk130ii0qcswqsng5mzmxz8hrxqk0cs4c9x"; depends=[ape ggplot2 phylosim]; }; pcrsim = derive2 { name="pcrsim"; version="1.0.2"; sha256="04177xl513k01prmf93kha91dyxmb9v80d1y4lz73fxsifj6bhar"; depends=[data_table ggplot2 gWidgets mc2d plyr strvalidator]; }; - pcse = derive2 { name="pcse"; version="1.9"; sha256="04vprsvcmv1ivxqrrvd1f8ifg493byncqvmr84fmc0jw5m9jrk3j"; depends=[]; }; + pcse = derive2 { name="pcse"; version="1.9.1"; sha256="07382jz75ywqr4q750rk66yf0j28k54plx281k1yi541la8vic57"; depends=[]; }; pdR = derive2 { name="pdR"; version="1.5"; sha256="072ra8czfvgcgkbdfkjhbpk7f23zh717f9sh84vls9j0wyrai6hn"; depends=[boot car coefplot lmtest papeR plm sandwich]; }; pdSpecEst = derive2 { name="pdSpecEst"; version="1.2.1"; sha256="0j68jmsm6c9pan195k0l0nm1ldbipl5ywlbwkz61dblspizh04iw"; depends=[ddalpha multitaper Rcpp RcppArmadillo]; }; pdc = derive2 { name="pdc"; version="1.0.3"; sha256="0503n7aiy0qrl790yfjvpm7bbyz1i4818rlg96q0fvzb58zqmyvc"; depends=[]; }; @@ -9191,7 +9371,7 @@ in with self; { pdfetch = derive2 { name="pdfetch"; version="0.2.3"; sha256="1fcjhq79dcbnghmkfpy1h29gcywr1hq91xij5f21wgp4xx465sha"; depends=[curl httr jsonlite lubridate readr reshape2 XML xml2 xts zoo]; }; pdfsearch = derive2 { name="pdfsearch"; version="0.1.1"; sha256="0k62j6ilv8rmmmasqyb3hklhjqg22jiyx0sxd7f8n0xmlfcjgfqi"; depends=[pdftools tibble]; }; pdftables = derive2 { name="pdftables"; version="0.1"; sha256="1gnwjijr89cczchc7yi4w5xiw0dalbymvj23rymm8cfra34iwn5p"; depends=[httr]; }; - pdftools = derive2 { name="pdftools"; version="1.5"; sha256="09z4174zbp0nzdkpwx5yxxlmzskqg48gc6n5qpmx0hkanfz8g7ls"; depends=[Rcpp]; }; + pdftools = derive2 { name="pdftools"; version="1.6"; sha256="00m5x1n5kjzvc1wljfy8riq2srxjvklasnh6ps8a89zbgglhp5cv"; depends=[Rcpp]; }; pdist = derive2 { name="pdist"; version="1.2"; sha256="18nd3mgad11f2zmwcp0w3sxlch4a9y6wp8dfdyzvjn7y4b4bq0dd"; depends=[]; }; pdmod = derive2 { name="pdmod"; version="1.0.1"; sha256="04bk9gjg2c55hk6k1hy0m29927s8a5ig6mr4xb89npam68g0pcms"; depends=[mco]; }; pdolsms = derive2 { name="pdolsms"; version="0.2"; sha256="18gwr1xnm7jbqna911b7haa9sv1i2qvq18w00dkbnj796rh0h78f"; depends=[reshape2]; }; @@ -9201,8 +9381,8 @@ in with self; { peakRAM = derive2 { name="peakRAM"; version="1.0.2"; sha256="0mj7f8jqkfky61xag2km0svbgvfmif3c1d8ccav6pv1963cg3cvv"; depends=[]; }; pear = derive2 { name="pear"; version="1.2"; sha256="1ixmyzm72s18qrfv2m8xzh5503k1q90lhddq4sp46m0q7qyxb192"; depends=[]; }; pearson7 = derive2 { name="pearson7"; version="1.0-2"; sha256="0x8bnlzgmfah8lzdg8skxs7bm8yq0nkrhqi7q43h902j4jl5b8jy"; depends=[]; }; - pec = derive2 { name="pec"; version="2.5.4"; sha256="1gi8vvdj3mwpi5rgfqci1lan1a34nbcyyypwa171sfj7j1m770r3"; depends=[foreach prodlim rms survival timereg]; }; - pedantics = derive2 { name="pedantics"; version="1.6"; sha256="08d13igjprqb8l2i8y07rn8pdq6bvjy8bf2ccpixv34d8cg5758j"; depends=[genetics kinship2 MasterBayes MCMCglmm mvtnorm]; }; + pec = derive2 { name="pec"; version="2018.04.18"; sha256="0a6q37l42zbz566bz0qs5aszd71bb0kd9bz0zmb42q0ak0v4yijd"; depends=[foreach prodlim rms survival timereg]; }; + pedantics = derive2 { name="pedantics"; version="1.7"; sha256="14hphziwqrq4fkxlvp94j564q19k9fabvhmdz7zhb6cvak6xv1n6"; depends=[genetics kinship2 MasterBayes MCMCglmm mvtnorm]; }; pedgene = derive2 { name="pedgene"; version="2.9"; sha256="1200d6blz7n3krnvhw0i9mz6219vwk0vlj17yzr3fqzyn5cyf91z"; depends=[CompQuadForm kinship2 Matrix survey]; }; pedigree = derive2 { name="pedigree"; version="1.4"; sha256="1dqfvzcl6f15n4d4anjkd0h8vwsbxjg1lmlj33px8rpp3y8xzdgw"; depends=[HaploSim Matrix reshape]; }; pedigreemm = derive2 { name="pedigreemm"; version="0.3-3"; sha256="1bpkba9nxbaxnivrjarf1p2p9dcz6smf9k2djawis1wq9dhylvsb"; depends=[lme4 Matrix]; }; @@ -9226,11 +9406,11 @@ in with self; { pequod = derive2 { name="pequod"; version="0.0-5"; sha256="0mwrgyrxgiifpnpy15qxpdrdmd7dxqihccrnj5nh8fq9fvwymamg"; depends=[car ggplot2]; }; perARMA = derive2 { name="perARMA"; version="1.6"; sha256="0k70lcqhiiffrwzvh51asnhx68qxpnjnxadarvgpgbc7kfy7lv9x"; depends=[corpcor gnm matlab Matrix signal]; }; perccal = derive2 { name="perccal"; version="1.0"; sha256="1akak068d0g70amj5sbvnqbywzy21l4wz11mhp71b7cp4xmr9n12"; depends=[Rcpp RcppArmadillo RcppEigen]; }; - perccalc = derive2 { name="perccalc"; version="1.0.0"; sha256="0327jj67gqq05a6fd5iac3b47ch7mgslalk4hr92v6svh8cz4syv"; depends=[broom devtools dplyr ggplot2 haven magrittr MASS multcomp purrr tibble tidyr tidyverse]; }; + perccalc = derive2 { name="perccalc"; version="1.0.1"; sha256="0dq5m7d6jdapbnkh65f5cizqiggpl1922nl4gc6damzvyym95qrj"; depends=[broom dplyr magrittr multcomp purrr tibble tidyr]; }; performanceEstimation = derive2 { name="performanceEstimation"; version="1.1.0"; sha256="08jx2zl6xh0rp54xa70gb717wbfdzfrx9b47i3b3ly41qaf85vrc"; depends=[dplyr ggplot2 parallelMap tidyr]; }; pergola = derive2 { name="pergola"; version="1.0"; sha256="1650ipp2b455xdkznwm7bnxvimad7nbyr9i1lg2vdh64j1qfh7gl"; depends=[seriation]; }; perm = derive2 { name="perm"; version="1.0-0.0"; sha256="0075awl66ynv10vypg63fcxk33qzvxddrp8mi4w08ysvimcyxijk"; depends=[]; }; - permDep = derive2 { name="permDep"; version="1.0-0"; sha256="15jjxni14i3br0j5cqajgydkb71yd657fvz4m0jcr66g1sb77aij"; depends=[BB goft survival]; }; + permDep = derive2 { name="permDep"; version="1.0-1"; sha256="03va74vxzijy169pqf6qhpw4afb3r3ia5y0qcfqz1xjs2zmck7mj"; depends=[BB survival]; }; permGPU = derive2 { name="permGPU"; version="0.14.9"; sha256="10r2qxbvzjxv3520lrn6cwi5akhhwgkhz7yaqxi5vh2f5l0s49wy"; depends=[Biobase foreach RUnit survival]; }; permGS = derive2 { name="permGS"; version="0.2.5"; sha256="0d2kp3c1fmnjjmsvc2qwh6m66yqvy2vrrxgv1fj2i4clsbavfa0y"; depends=[coin survival]; }; permPATH = derive2 { name="permPATH"; version="1.1"; sha256="06h1lqpmkg4ajjh4r837qp094h105n4mpvafnp2nsbv9yyayd4h8"; depends=[R2HTML xtable]; }; @@ -9240,12 +9420,13 @@ in with self; { permute = derive2 { name="permute"; version="0.9-4"; sha256="1w8wzk1fg9q7wvisnfp2js70dg0m9wi12gkdhpyngpbdcgssahd5"; depends=[]; }; perry = derive2 { name="perry"; version="0.2.0"; sha256="1lfmcq2xsxmfs7cxvhgxcsggslgjicbaks4wcjw1yjh67n559j46"; depends=[ggplot2 robustbase]; }; persiandictionary = derive2 { name="persiandictionary"; version="1.0"; sha256="0rgi36ngpiax3p5zk4cdgf3463vgx7zg5wxscs2j7834yh37jwax"; depends=[]; }; - personalized = derive2 { name="personalized"; version="0.1.4"; sha256="0w6qvkbzpbsyjvsgadx59h49im4c03x8kyd39z2w825vznds9xmz"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; }; + personalized = derive2 { name="personalized"; version="0.1.5"; sha256="1id3ml5n7l7lgd029csn23ffrsqhm4g1id20hxqhqz4knknfxkkf"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; }; personograph = derive2 { name="personograph"; version="0.1.3"; sha256="07lrlbw4222l1d5rwn0hfqliyk8sqjf6ipz4n2zwcbk113bb8sy7"; depends=[grImport]; }; perspectev = derive2 { name="perspectev"; version="1.1"; sha256="175s1nq5z4gfs5qb39lq230g6n0v8fxzs5hr9j2rgx0knpbjfq03"; depends=[ape boot doParallel foreach ggplot2 mapproj sp]; }; perturb = derive2 { name="perturb"; version="2.05"; sha256="18ydmmp8aq4rf9834dmsr4fr9r07zyn97v8a1jqz3g9njza983la"; depends=[]; }; - perturbR = derive2 { name="perturbR"; version="0.1.0"; sha256="0zn10xm39sbv9g8mvp582c6bwpdk6ss1b50pdk7nkdmih3g6cxqb"; depends=[dils ggplot2 igraph mcclust]; }; + perturbR = derive2 { name="perturbR"; version="0.1.1"; sha256="13in5xjv1854ihalyj4427ix4scc17b95iw72rcb4yivha9jgplq"; depends=[dils ggplot2 igraph mcclust]; }; pesticides = derive2 { name="pesticides"; version="0.1"; sha256="1w180hqqav0mh9sr9djj94sf55fzh4r373a7h08a2nz9nyjpq09w"; depends=[]; }; + petitr = derive2 { name="petitr"; version="1.0"; sha256="0i13zhdrdka0ij0khdzj6ylvvcn4wxvplb8a368i1s64cpgak30c"; depends=[]; }; petrinetR = derive2 { name="petrinetR"; version="0.1.0"; sha256="0na8srzwi933bva9j3hrn4ji8s58dm28jpxw9q13mpahzch4r454"; depends=[dplyr visNetwork]; }; petro_One = derive2 { name="petro.One"; version="0.1.3"; sha256="13bxd011lprimy5m3z08l4yng2fkp28b1ad1bqs0piffx5bxw13n"; depends=[cluster data_table dplyr ggplot2 graph magrittr RColorBrewer Rgraphviz rvest RWeka tibble tm urltools wordcloud xml2]; }; pewdata = derive2 { name="pewdata"; version="0.2.0"; sha256="17j8fdn9x6hannr91zyccya523z3zm03gr517xfcyrd0m486xnqb"; depends=[httr magrittr purrr rvest]; }; @@ -9253,8 +9434,9 @@ in with self; { pfa = derive2 { name="pfa"; version="1.1"; sha256="0ikdd7ps8wnjp9nm66w447m06hqxnnk553jglxikl2w5d9vk6b31"; depends=[lars POET quantreg]; }; pgam = derive2 { name="pgam"; version="0.4.15"; sha256="12llflsb32dfvxl3nbyb9bsl9bmd35g5g163hd3axzmg1bgi21ls"; depends=[]; }; pgee_mixed = derive2 { name="pgee.mixed"; version="0.1.0"; sha256="115vvpv54q80486i3xs2yhmfyx476cf4g1v43q6l7wj3jwzcrvbg"; depends=[copula mvtnorm Rcpp RcppArmadillo]; }; - pgirmess = derive2 { name="pgirmess"; version="1.6.8"; sha256="1sy5jf356mylsr0bjmvdykcv1ssf60v4bnrsqjdqsrry9a7iyp7g"; depends=[boot maptools rgdal rgeos sp spdep splancs]; }; + pgirmess = derive2 { name="pgirmess"; version="1.6.9"; sha256="1i1qn68isaz2lbpqyydjgj9kri09aknza5qjn6m1wa1alyl7f611"; depends=[boot maptools rgdal rgeos sp spdep splancs]; }; pglm = derive2 { name="pglm"; version="0.2-1"; sha256="14hnlidf62kzcf83jc7k17n4hjjaj82scdwh8a7qxd056vygkqx2"; depends=[maxLik plm statmod]; }; + pgmm = derive2 { name="pgmm"; version="1.2.2"; sha256="1z39148gvs5nndd54x2afpsqdyqd8apjgnxn0ndv2071aa8gyk1j"; depends=[]; }; pgnorm = derive2 { name="pgnorm"; version="2.0"; sha256="1k9z7pvmranr8m62v7amc0pj6lwzh3wqi79gg3mflifn1mr6c057"; depends=[]; }; pgraph = derive2 { name="pgraph"; version="0.8"; sha256="1r784snci5m81qljfh1r3w8qzszmy0476zvsd1alh43afzg9zpr5"; depends=[energy glasso glmnet SAM]; }; pgs = derive2 { name="pgs"; version="0.4-0"; sha256="1zf5sjn662sds3h06zk5p4g71qnpwp5yhw1dkjzs1rs48pxmagrx"; depends=[gsl R2Cuba]; }; @@ -9263,6 +9445,7 @@ in with self; { ph2mult = derive2 { name="ph2mult"; version="0.1.1"; sha256="0w3w18fkr9xzv6mpb00cz5id33zgsnl6s8zgjpchzvrhmpjpp437"; depends=[clinfun]; }; phalen = derive2 { name="phalen"; version="1.0"; sha256="0awj9a48dy0azkhqkkzf82q75hrsb2yw6dgbsvlsb0a71g4wyhlr"; depends=[sqldf]; }; phangorn = derive2 { name="phangorn"; version="2.4.0"; sha256="0xc8k552nxczy19jr0xjjagrzc8x6lafasgk2c099ls8bc1yml1i"; depends=[ape fastmatch igraph magrittr Matrix quadprog Rcpp]; }; + phantom = derive2 { name="phantom"; version="0.1.3"; sha256="0kgw65jziw5s03isq5ywmqijhkbik5i84k30hx5gbi0zzgj8y0h1"; depends=[gplots MASS NMF qusage RColorBrewer Rcpp RcppArmadillo]; }; phase1RMD = derive2 { name="phase1RMD"; version="1.0.8"; sha256="1wvlajsqb8y8f30asq1lyk87kmakh2risnky98g5gday765y90qa"; depends=[arrayhelpers boot coda ggplot2 mvtnorm rjags]; }; phaseR = derive2 { name="phaseR"; version="1.3"; sha256="1hwclb7lys00vc260y3z9428b5dgm7zq474i8yg0w07rxqriaq2h"; depends=[deSolve]; }; phcfM = derive2 { name="phcfM"; version="1.2"; sha256="0i1vr8rmq5zs34syz2vvy8c9603ifzr9s5v2izh1fh8xhzg7655x"; depends=[coda]; }; @@ -9272,20 +9455,21 @@ in with self; { phenmod = derive2 { name="phenmod"; version="1.2-3"; sha256="0dxwx8c7zka29fq7svrvn8bghj8jh8grbrgsw4pvavx2439cldak"; depends=[gstat lattice pheno RColorBrewer]; }; pheno = derive2 { name="pheno"; version="1.6"; sha256="0xdya1g1ap7h12c6zn3apbkxr725rjhcp4gbdchkvcnwz4y9vw8c"; depends=[nlme quantreg SparseM]; }; pheno2geno = derive2 { name="pheno2geno"; version="1.4.0"; sha256="0fy8z6x1y0sakp07jb6zs0w0f86pbbllicj4qylxzfd5rpn1rqr0"; depends=[mixtools qtl VGAM]; }; - phenoCDM = derive2 { name="phenoCDM"; version="0.0.2"; sha256="07fmljdn5dg9v2mv0k7hjk7xlldhvzvcxia8vda0xkpn3hlrriid"; depends=[rjags]; }; - phenology = derive2 { name="phenology"; version="6.0.3"; sha256="17idd9znwmgsa6wzijc4ahvlld4qp6sihyg3cdv91gfl0yjd51w1"; depends=[HelpersMG lmf numDeriv optimx]; }; - phenomap = derive2 { name="phenomap"; version="1.2.0"; sha256="1lz0sjpk8nj9v2fxqzwhcdppjy3hafb3ag2lbi3v85lc9ngwccdd"; depends=[doParallel dplyr phenex plyr raster rgdal stringr]; }; + phenoCDM = derive2 { name="phenoCDM"; version="0.1.2"; sha256="1158ac6cjl83pnfxmklxjnh35nagx1c21iidawr1s7pqv858ixix"; depends=[rjags]; }; + phenocamr = derive2 { name="phenocamr"; version="1.1.0"; sha256="10k7z82skkf9l15a2b77ygg5lkg0x68z7xbkw4p3mgs68dd9ah63"; depends=[changepoint curl daymetr DT jsonlite leaflet plotly shiny shinydashboard zoo]; }; + phenology = derive2 { name="phenology"; version="7.0"; sha256="1glbjm7i2kyl04k0sam29zy1lpzfq2mpkgg44jpnby8c9vz8pkmi"; depends=[HelpersMG lmf numDeriv optimx]; }; + phenomap = derive2 { name="phenomap"; version="1.2.1"; sha256="0kpngxqrbahild5nblfvgx2kna43hqqldx5q3b127dnqwzbhfvbb"; depends=[doParallel dplyr phenex plyr raster rgdal stringr]; }; phenopix = derive2 { name="phenopix"; version="2.3.1"; sha256="1yy163nh2b74m0v7f2gkgxaplvw4whs2h30bkw4chl0zyrcrci86"; depends=[bcp doParallel foreach gtools iterators jpeg plyr raster SDMTools sp stringr strucchange zoo]; }; phia = derive2 { name="phia"; version="0.2-1"; sha256="0rv2akl5a488vax4sd9wnx765mch4vvcmg3iyxyljzl5kpqh5r00"; depends=[car Matrix]; }; - philentropy = derive2 { name="philentropy"; version="0.0.3"; sha256="00fpbmxg8m8apjb6cdrhh9rw3vp1j65ccvsqj1xlfcn1x5l1h3h8"; depends=[dplyr KernSmooth Rcpp]; }; + philentropy = derive2 { name="philentropy"; version="0.1.0"; sha256="19nrfkla64jbd46ig13ljy6k5dxiwq2mnsfn37sgy9sf4h8zzwk3"; depends=[dplyr KernSmooth Rcpp]; }; phmm = derive2 { name="phmm"; version="0.7-10"; sha256="1ra5qf24qmwjf8cra9yh20i2s8jv0kzb1gyw96il8r5cdl20gbcz"; depends=[lattice Matrix survival]; }; phonR = derive2 { name="phonR"; version="1.0-7"; sha256="0al2cbynnbvmd90lk1w1g1ppslqq0ng8vbb6bl7m4kqwd2lgv056"; depends=[deldir plotrix splancs]; }; phonTools = derive2 { name="phonTools"; version="0.2-2.1"; sha256="01i481mhswsys3gpasw9gn6nxkfmi7bz46g5c84m13pg0cv8hxc7"; depends=[]; }; phonenumber = derive2 { name="phonenumber"; version="0.2.2"; sha256="1m5idp538lvynmfp8m7l89js6hk5lpp26k419bdvj3hd3ap0n9lg"; depends=[]; }; phonics = derive2 { name="phonics"; version="1.0.0"; sha256="02bkw589iijlzbw0cbg9qhq99jij2p92cqrxa77chkly4naqkqds"; depends=[BH Rcpp]; }; - photobiology = derive2 { name="photobiology"; version="0.9.19"; sha256="1islzlsj37y41c30r1cqmi646596n5b2swx8csxl0l1lrz0h8nnd"; depends=[caTools dplyr lubridate plyr polynom rlang splus2R tibble]; }; + photobiology = derive2 { name="photobiology"; version="0.9.20"; sha256="0w4xcg9r6hn8lv8jkmfr1b2w2q30wxs6m3nv4409hy9rp77qgfcl"; depends=[caTools dplyr lubridate plyr polynom rlang splus2R tibble]; }; photobiologyFilters = derive2 { name="photobiologyFilters"; version="0.4.4"; sha256="14aiw5jxd6wnngy1rbbm85l0yx64nxrancal017wvr5n867c32d6"; depends=[photobiology]; }; - photobiologyInOut = derive2 { name="photobiologyInOut"; version="0.4.13"; sha256="1zagvdaiv8d5frwki20wwvbyw4a9in3k8560janbmd161xh13ii0"; depends=[colorSpec dplyr hyperSpec lazyeval lubridate pavo photobiology readr readxl reshape2 tibble]; }; + photobiologyInOut = derive2 { name="photobiologyInOut"; version="0.4.14"; sha256="1q0dd3szr06rm6zy2mkb37n4s37554x71jgkhmw88iiy58y2fkv5"; depends=[colorSpec dplyr hyperSpec lazyeval lubridate pavo photobiology readr readxl tibble tidyr]; }; photobiologyLEDs = derive2 { name="photobiologyLEDs"; version="0.4.3-1"; sha256="0inhl6ba1fzkak4752m60hkm6fzapzyz5kchvz18yv33dmm13v1c"; depends=[photobiology]; }; photobiologyLamps = derive2 { name="photobiologyLamps"; version="0.4.2"; sha256="0fcin04xc2k39qdipslqd3w3bsd8yl3xlvg7mlgm3aphfwg4hnmj"; depends=[photobiology]; }; photobiologyPlants = derive2 { name="photobiologyPlants"; version="0.4.1"; sha256="0mpb5sv4wkvqzbhf193zkhap44yzlhxrnjx1p3j9iyjdg4bb1kka"; depends=[photobiology photobiologyWavebands]; }; @@ -9306,17 +9490,18 @@ in with self; { phylocanvas = derive2 { name="phylocanvas"; version="0.1.3"; sha256="1l5br500lwwf7vp8wph5ykpkpqd15lypvhzy0c1cc8g8c6f7pckn"; depends=[ape htmlwidgets phylobase]; }; phyloclim = derive2 { name="phyloclim"; version="0.9-4"; sha256="0ngg8x192lrhd75rr6qbh72pqijbrhrpizl27q0vr6hp7n9ch3zx"; depends=[ape raster]; }; phylocurve = derive2 { name="phylocurve"; version="2.0.9"; sha256="1d01nwfpyh61r00dq6cnhxdwzk81jr3l6aa51dl1wck4cy0frscp"; depends=[ape doParallel drc dtw foreach geiger geomorph GPfit Matrix mvnmle phylolm phytools Rcpp RcppArmadillo rgl]; }; - phylogram = derive2 { name="phylogram"; version="1.0.1"; sha256="0hjniq91ivw82aqifb4sqqbw36scs0081s7xrjj37581rk0xamyl"; depends=[openssl Rcpp]; }; + phylogram = derive2 { name="phylogram"; version="2.0.1"; sha256="17032pr87cdyz2aynb17jspkghq64xivsf1ylky2niypz7xbz0i3"; depends=[ape]; }; phyloland = derive2 { name="phyloland"; version="1.3"; sha256="10g40m6n2s4qvnzlqcwpy3k0j7bxdp79f586jj910b8p00ymrksp"; depends=[ape]; }; phylolm = derive2 { name="phylolm"; version="2.5"; sha256="0bffqzba6kcv8jyya7pja10mjnklhihczljhmj8q0pdrmd6qgqp8"; depends=[ape]; }; phylometrics = derive2 { name="phylometrics"; version="0.0.1"; sha256="1pmr6l3wmaf91wdlsc5m63l07fibngnly2qzkma0rdi463ii03il"; depends=[mvtnorm]; }; phylopath = derive2 { name="phylopath"; version="1.0.0"; sha256="1n6f7piygps3pwqapsvqpz764995kxhdqz1hc5n6znvl01ykdqx5"; depends=[ape dplyr ggm ggplot2 ggraph igraph MuMIn pbapply phylolm purrr tibble tidyr]; }; + phyloseqGraphTest = derive2 { name="phyloseqGraphTest"; version="0.0.1"; sha256="0bxhikzrs5gcwkchpmxwvampyrbwv0d3ay5i7s766x6687xzm6qa"; depends=[ggnetwork ggplot2 igraph intergraph phyloseq]; }; phylosignal = derive2 { name="phylosignal"; version="1.2"; sha256="0apsg4v1n58wn8y8wnl6x1ahl903i29hh8bs2dw6ky2jafkjj4jb"; depends=[adephylo ape boot DBI igraph phylobase Rcpp RcppArmadillo]; }; phylosim = derive2 { name="phylosim"; version="3.0.2"; sha256="148zm43cgdhr264ffcabjx4abykks07jix6lypqysqy25fbmdngk"; depends=[ape compoisson ggplot2 R_methodsS3 R_oo]; }; phylotate = derive2 { name="phylotate"; version="1.2"; sha256="19nssrdax5w5a50159j39jgs7305s48k3h56ivyzs5di6l7x1yxj"; depends=[]; }; phylotools = derive2 { name="phylotools"; version="0.2.2"; sha256="1dhk1ncp5zi4zl1xfnjz64v983dm7bq7iimfjin80j0bdcpps44w"; depends=[ape]; }; phyndr = derive2 { name="phyndr"; version="0.1.0"; sha256="03y3j4ik6flrksqm2dwh2cihn12hzfdik0fsak4zbxjdzaqn5gim"; depends=[ape]; }; - phyreg = derive2 { name="phyreg"; version="0.7"; sha256="0saynhq4yvd4x2xaljcsfmqk7da2jq3jqk26fm9qivg900z4kf35"; depends=[]; }; + phyreg = derive2 { name="phyreg"; version="1.0.2"; sha256="0m1psq79zl7h8791pl8g6i0ybda7vgddza8r9mwqhg4sw1q4bzcp"; depends=[]; }; physiology = derive2 { name="physiology"; version="0.2.2"; sha256="0z394smbnmlrnp9ms5vjczc3avrcn5nxm8np5y58k86x470w6npz"; depends=[]; }; phytools = derive2 { name="phytools"; version="0.6-44"; sha256="1y815pv1cksj244vcb7q4qr45gzr4cb1qwi166h65ryggywcj48w"; depends=[animation ape clusterGeneration coda combinat maps MASS mnormt msm nlme numDeriv phangorn plotrix scatterplot3d]; }; phytotools = derive2 { name="phytotools"; version="1.0"; sha256="049znviv2vvzv23biy1l28axm7bc7biwmq4bnn0cnjqgkk48ysz3"; depends=[FME insol]; }; @@ -9327,6 +9512,7 @@ in with self; { pifpaf = derive2 { name="pifpaf"; version="1.0.1"; sha256="0wj1fbhd871fnw7fjlbh0gdjz848mbwl1bzjp3cgmh9s7jnd2kci"; depends=[ggplot2 gridExtra MASS matrixcalc numDeriv sfsmisc]; }; pillar = derive2 { name="pillar"; version="1.2.1"; sha256="1ryd7m570y6q3w71wd5dz042b3d0dv24g2rbkw1kdx0n6jj9gsbd"; depends=[cli crayon rlang utf8]; }; pim = derive2 { name="pim"; version="2.0.1"; sha256="1m804clxc8m4nyzi4hhfy118527lgf2sb7589qd61fb83yh6hi8p"; depends=[BB nleqslv]; }; + pimeta = derive2 { name="pimeta"; version="1.0.0"; sha256="0ri6qznk3nj1a2nj9qdahlm452drzcb51x8g89ffb3y6xjsh6y5g"; depends=[Rcpp RcppEigen]; }; pinbasic = derive2 { name="pinbasic"; version="1.2.0"; sha256="1sn4q9g2pw8z6gyxi302bd7p578ldy1g6419w56z7jgv7m8n7g73"; depends=[fastcluster ggplot2 lubridate Rcpp reshape2 scales]; }; pinfsc50 = derive2 { name="pinfsc50"; version="1.1.0"; sha256="1fja8xdqwsm4g223wmb2yg5fqmsg94hchzjd4qrqah1zb8vbdfdn"; depends=[]; }; pingr = derive2 { name="pingr"; version="1.1.2"; sha256="17fh2gjlmwy6wy8i24q76fivjig8jm05g9kvfz81q0h6b5zxnpmg"; depends=[]; }; @@ -9351,6 +9537,7 @@ in with self; { pkgcopier = derive2 { name="pkgcopier"; version="0.0.1"; sha256="04vpjf8nvqnpry54f1wwrnmipd5m6gqd89c3vkryqx88jk85jd8s"; depends=[httr stringr]; }; pkggraph = derive2 { name="pkggraph"; version="0.2.2"; sha256="0pzqlim84b22ahq5yr50ybffqa0f5k5ch372v37nw1ndzci211d8"; depends=[curl data_table dplyr ggnetwork ggplot2 htmltools igraph intergraph Matrix network networkD3 plyr RColorBrewer tibble]; }; pkgmaker = derive2 { name="pkgmaker"; version="0.22"; sha256="0vrqnd3kg6liqvpbd969jjsdx0f0rvmmxgdbwwrp6xfmdg0pib8r"; depends=[codetools digest registry stringr xtable]; }; + pkgnet = derive2 { name="pkgnet"; version="0.1.0"; sha256="0f7xakl7vsx4byw6wfb1yw9bk95wrqsjs8wq6prg697zpdy3c7fw"; depends=[assertthat covr data_table DT futile_logger igraph knitr magrittr mvbutils R6 rmarkdown visNetwork]; }; pkmon = derive2 { name="pkmon"; version="0.9"; sha256="1zcjz1h45qv81rwnjsgc9iwmrwpnsy917y7h66pz98wzszlxcsd2"; depends=[]; }; pkr = derive2 { name="pkr"; version="0.1.1"; sha256="0mwrpkmf016lpwkjhhjpq7bw18mvshpyhwgmgqfrfl9gfbq4gphd"; depends=[binr foreign forestplot]; }; pks = derive2 { name="pks"; version="0.4-0"; sha256="0fx7p2d83x0ip65aqp9dga59d9cggam8k79mi0drk5birzchqbcr"; depends=[sets]; }; @@ -9375,7 +9562,7 @@ in with self; { plmDE = derive2 { name="plmDE"; version="1.0"; sha256="19xxi0zzpxcrsdrbs0hiwqgnv2aaw1q3mi586wv27zz6lfqcr9lr"; depends=[limma MASS R_oo]; }; plmm = derive2 { name="plmm"; version="0.1-1"; sha256="1dfxd1mqqjy2mf7qc6mh4wx5ya9q8fkqgrf01apisb66xxx5zya7"; depends=[Formula nlme sm]; }; pln = derive2 { name="pln"; version="0.2-1"; sha256="09zg7zwmmqpjr1j59lqsjf4blrkya9wfwddgzfm9rr5jxrzvqcv8"; depends=[]; }; - plogr = derive2 { name="plogr"; version="0.1-1"; sha256="13zliqlbkl8b04k9ga0sx5jsh7k867gracgl84l2a9kcqy9mqx92"; depends=[]; }; + plogr = derive2 { name="plogr"; version="0.2.0"; sha256="0a8dhzlna79ggyhfr0nncgh15a9n6r0dsz664pz0ah323wpblqqf"; depends=[]; }; plot3D = derive2 { name="plot3D"; version="1.1.1"; sha256="0chn70fqwyca8lbnjnpbcj08ni0dfbax2gjmzhk2c4w72c04mzpn"; depends=[misc3d]; }; plot3Drgl = derive2 { name="plot3Drgl"; version="1.0.1"; sha256="12p4qc9vmhr86ssx6xnz3cmx84q5jgd28bw9dp4wjrn04n6l4va6"; depends=[plot3D rgl]; }; plotGoogleMaps = derive2 { name="plotGoogleMaps"; version="2.2"; sha256="0qv57k46ncg0wrgma0sbr3xf0j9j8cii3ppk3gs65ardghs3bf6b"; depends=[lattice maptools raster rgdal sp spacetime]; }; @@ -9387,7 +9574,7 @@ in with self; { plotfunctions = derive2 { name="plotfunctions"; version="1.3"; sha256="0cnmwkfjg45187j490sf01gxijhajrpi6j13hfckli2ysn6xrgz3"; depends=[]; }; plotluck = derive2 { name="plotluck"; version="1.1.0"; sha256="0arbvldg50lyn98vkrys1yjkkraz8jracwal4r2mlw991pnaikpp"; depends=[ggplot2 hexbin Hmisc plyr quantreg RColorBrewer scales]; }; plotly = derive2 { name="plotly"; version="4.7.1"; sha256="0wj9lw7w28z8w9ip9vadv6sydjhqyg65kfiai9m3bndzz50b1m3w"; depends=[base64enc crosstalk data_table digest dplyr ggplot2 hexbin htmltools htmlwidgets httr jsonlite lazyeval magrittr purrr RColorBrewer scales tibble tidyr viridisLite]; }; - plotmo = derive2 { name="plotmo"; version="3.3.5"; sha256="1hiak4gg73ifml24mx1bjhgwqx9706v2mk5pxh59jvbrrc6mzvf4"; depends=[plotrix TeachingDemos]; }; + plotmo = derive2 { name="plotmo"; version="3.3.6"; sha256="11v1jncw2x96j1f7nhv9sqvy3ia3035yh8slpy2ky7lf8ravjy58"; depends=[plotrix TeachingDemos]; }; plotpc = derive2 { name="plotpc"; version="1.0.4"; sha256="1sf7n7mfyaijldm24bc8r8pfm8pp9cyaja7am14z2wpj2j9f9vyq"; depends=[]; }; plotprotein = derive2 { name="plotprotein"; version="1.0"; sha256="14kfb4xxpfp8klz31kb7cpc39636ax2cx2483vqqkciccb28f0ks"; depends=[ade4 plotrix plyr seqinr XML]; }; plotrix = derive2 { name="plotrix"; version="3.7"; sha256="0rw81n9p3d2i03b4pgcfj5blryc94f29bm9a4j9bnp5h8qjj6pry"; depends=[]; }; @@ -9411,8 +9598,7 @@ in with self; { plus = derive2 { name="plus"; version="1.0"; sha256="1l7lvnq7vahj8m7knmr4q3wj00ar7iq89j45a2dqn2bh0qyj68ls"; depends=[]; }; plusser = derive2 { name="plusser"; version="0.4-0"; sha256="1g100dh8cvn9q09j0jbkw4xmwjdp1lm4651369975fm99nrlp1j9"; depends=[lubridate plyr RCurl RJSONIO]; }; plyr = derive2 { name="plyr"; version="1.8.4"; sha256="1igar5pcjqh0jyxv0z3jah8rz617vfa86vw0r5c7c031b7bj5db0"; depends=[Rcpp]; }; - pmap = derive2 { name="pmap"; version="0.6.0"; sha256="1g7das8bbp31r6syzn3zbxb8han1lqs9zpija7z8w2jpbw7gj4lb"; depends=[data_table DiagrammeR dplyr lubridate shiny stringr]; }; - pmatch = derive2 { name="pmatch"; version="0.1.2"; sha256="1sbd02q2jqjqnh269m9f83mk0vbhh4mqqv0p23p6rj6gz0wljz9c"; depends=[dplyr glue purrr rlang tibble]; }; + pmatch = derive2 { name="pmatch"; version="0.1.3"; sha256="1k83ysgc4dwms0k5knh2rj99l3kfclw9a29h2ksphy0g4r1ig9k3"; depends=[dplyr glue purrr rlang tibble]; }; pmc = derive2 { name="pmc"; version="1.0.2"; sha256="1pamxg2cwyg36w0xnggrv5w03lb12l25z2da7xm1jvr17h0ipqmh"; depends=[dplyr geiger ggplot2 ouch tidyr]; }; pmcgd = derive2 { name="pmcgd"; version="1.1"; sha256="1pybzvyjmzpcnxrjsas06diy3x83i1r5491s6ccyr63l56hs55d5"; depends=[mixture mnormt]; }; pmclust = derive2 { name="pmclust"; version="0.2-0"; sha256="1bpfix76ylmn5ds6y0v40mfad7znaa6dj5ngr4mzv96yy6mg13ns"; depends=[MASS pbdBASE pbdDMAT pbdMPI]; }; @@ -9421,6 +9607,7 @@ in with self; { pmml = derive2 { name="pmml"; version="1.5.4"; sha256="1acld1x0z5rgyxb5id071s3zvf2vbv4b9nngvxrb63ay3yyy124b"; depends=[stringr XML]; }; pmmlTransformations = derive2 { name="pmmlTransformations"; version="1.3.1"; sha256="1cxmp3fgsf3z71v6qpd9l9ilgda5knan7vqifxpgm8m7a30sp3f3"; depends=[]; }; pmr = derive2 { name="pmr"; version="1.2.5"; sha256="0dq97dfjmgxlhr3a2n20vyyzfmamcicw878hdxpw31lw02xs6yls"; depends=[]; }; + pmxTools = derive2 { name="pmxTools"; version="0.1.0"; sha256="1a242c85ywk026vb778s8bjc331ww11rb15pai02wbvpw9x4kpa0"; depends=[GGally ggplot2 magrittr MASS PKNCA plyr stringr XML xpose]; }; png = derive2 { name="png"; version="0.1-7"; sha256="0g2mcp55lvvpx4kd3mn225mpbxqcq73wy5qx8b4lyf04iybgysg2"; depends=[]; }; pnmtrem = derive2 { name="pnmtrem"; version="1.3"; sha256="0053gg368sdpcw2qzydpq0c5v2cxdlwgf5k68cbw0yx41csjgvz0"; depends=[MASS]; }; pnn = derive2 { name="pnn"; version="1.0.1"; sha256="1s6ib60sbdas4720hrsr5lsszsa474kfblqcalsb56c84gkl42ka"; depends=[]; }; @@ -9430,7 +9617,7 @@ in with self; { poilog = derive2 { name="poilog"; version="0.4"; sha256="0bg03rd5rn4rbdpiv87i8lamhs5m7n7cj8qf48wpnirg6jpdxggs"; depends=[]; }; pointRes = derive2 { name="pointRes"; version="1.1.3"; sha256="0yfzidc93ghpf116lxbx4fr0d71wl79y3nz6mkirx4pli6gb8x8d"; depends=[ggplot2 gridExtra plyr TripleR]; }; pointblank = derive2 { name="pointblank"; version="0.1"; sha256="11v0x264065iljhv77m4yc44zqd0i9bg95c6qiv8d85nf97201hh"; depends=[digest dplyr Hmisc htmltools knitr lazyWeave lubridate magrittr mailR pixiedust purrr readr rJava rlang rmarkdown stringr tibble tidyr]; }; - pointdensityP = derive2 { name="pointdensityP"; version="0.3.2"; sha256="1wi1lv5y589vmibvzigpqk0m9k5m265brhnz520g7wa4h3wpsdq3"; depends=[data_table]; }; + pointdensityP = derive2 { name="pointdensityP"; version="0.3.3"; sha256="0ifkxxlmrrwscakmlap5bpfkzn4gfx9nc84p98i2spncnyd215ya"; depends=[data_table]; }; poio = derive2 { name="poio"; version="0.0-3"; sha256="1smbnqjlicaqq2hswl910yiirzb9zikbk4pqxm9pwpixywj0nkys"; depends=[assertive_base assertive_files assertive_properties assertive_sets assertive_strings assertive_types devtools digest dplyr magrittr R6 stringi tibble whoami]; }; poisDoubleSamp = derive2 { name="poisDoubleSamp"; version="1.1"; sha256="13wyj9jf161218y4zjv2haavlmanihp9l59cvh7x8pfr9dh2dwr8"; depends=[Rcpp]; }; poisbinom = derive2 { name="poisbinom"; version="1.0.1"; sha256="0mjxg0s3nck7qrmq4bbrhwxfwr6fqml54s9k8q1mkfzlifa7qyf7"; depends=[Rcpp]; }; @@ -9442,20 +9629,21 @@ in with self; { poliscidata = derive2 { name="poliscidata"; version="1.2.0"; sha256="0vn9wdlh3bi24mcq0r4ani2b0hhlg1za1z6fw8ikz7952gpacqk8"; depends=[abind car descr ENmisc gplots Hmisc plotrix plyr survey weights xtable]; }; politeness = derive2 { name="politeness"; version="0.2.2"; sha256="06h4g9xbk5dbaqzhybqc0mppa61ypb7ryi6hghqnqyj32y8r6dbr"; depends=[data_table ggplot2 glmnet quanteda spacyr stringr textir tm]; }; pollen = derive2 { name="pollen"; version="0.70.0"; sha256="1hk9sjxzwglj98ryic3m80lajzv1klnq9dl6i97c8f0ihbf97zdq"; depends=[dplyr lubridate purrr]; }; - pollstR = derive2 { name="pollstR"; version="2.0.0"; sha256="0lcxhi1mazs8nh9hbbqyqx4axn5lji5fnp0kxrjwjxmzf59nksj8"; depends=[httr lubridate purrr stringr]; }; + pollstR = derive2 { name="pollstR"; version="2.0.1"; sha256="13g5z1hix1bmsxznq5qx82yf445rvvyn67ch9bihxm1hr4cr4sbl"; depends=[httr lubridate purrr stringr]; }; polmineR = derive2 { name="polmineR"; version="0.7.5"; sha256="0yz2c915jrf3dqadi6px9jidfwr4jd23rjrpas4xg4m6dx0f70jm"; depends=[data_table DT jsonlite Matrix pbapply R6 slam tm]; }; polspline = derive2 { name="polspline"; version="1.1.12"; sha256="0chg5f6fq5ngjp1kkm4kjyxjc3kk83ky2ky5k7q3rhd8rkhd4szw"; depends=[]; }; polyCub = derive2 { name="polyCub"; version="0.6.1"; sha256="16nr83gmv6pnk89nqxh8ihzacb0y8l4lz05c8sp6whmr26ja9vnf"; depends=[sp]; }; polyPK = derive2 { name="polyPK"; version="3.0.0"; sha256="1vdfsad2b9habvm2ikjgn7ihnm851q9lqmgqjlsl737ka1vsgisf"; depends=[circlize corrplot gplots Hmisc impute imputeLCMD mixOmics pcaMethods pkr plyr ropls samr sqldf xlsx]; }; - polySegratio = derive2 { name="polySegratio"; version="0.2-4"; sha256="05kvj475zhlrmp7rm691cfs28igp4ac2cn2xxf7axx09v1nq33db"; depends=[gdata]; }; - polySegratioMM = derive2 { name="polySegratioMM"; version="0.6-3"; sha256="1y4kzb1p3aw7ng8mv1hszpvb5hwwxy4vg34mhhk705ki4jy8jgvp"; depends=[coda gtools lattice polySegratio]; }; + polySegratio = derive2 { name="polySegratio"; version="0.2-5"; sha256="0djw49mbhd7x6jr0f5qkb9akw3fw3ax4w9xv8iwa5f65q5gbxpdf"; depends=[gdata]; }; + polySegratioMM = derive2 { name="polySegratioMM"; version="0.6-4"; sha256="162xj52566kaxgfk7c14170xx07isyjmqb9skvhrdg7sz20lc3l1"; depends=[coda gtools lattice polySegratio]; }; polyaAeppli = derive2 { name="polyaAeppli"; version="2.0"; sha256="0kyz3ap92xz7aqyviyrpggfmicy1gybrx7y19djsmixcwz53zqch"; depends=[]; }; polyapost = derive2 { name="polyapost"; version="1.5"; sha256="0r2h51l2y0sj0xahdzfy1lyq4kh166crh2j02sk85q577q9d883y"; depends=[boot rcdd]; }; polychaosbasics = derive2 { name="polychaosbasics"; version="1.1-1"; sha256="1kw5c4dmgpkbk2a30hh5n6xqpnbh6q2swxsdjkmcmhkwrzm4ylm2"; depends=[lhs MASS]; }; polyclip = derive2 { name="polyclip"; version="1.6-1"; sha256="07xxw5ik30ds18kv808hynzmz3w351k6lj4ifz9kak0s7xsaqfn3"; depends=[]; }; polycor = derive2 { name="polycor"; version="0.7-9"; sha256="0d0756faksviic5jrc47fg6l3wsm9r2wlbnxiw08563rv7shbvb7"; depends=[Matrix mvtnorm]; }; polyfreqs = derive2 { name="polyfreqs"; version="1.0.2"; sha256="13859vbpys5yj1qiapyzv9wlvi6x6k0rm335bsi1v07ch3x2bh3b"; depends=[Rcpp]; }; - polymapR = derive2 { name="polymapR"; version="1.0.13"; sha256="18bwi149y2622bdcyb5gcq0mxwalg6dsv3dgsnx2km4kd5x1a4ck"; depends=[combinat doParallel foreach igraph knitr Matrix MDSMap]; }; + polyglot = derive2 { name="polyglot"; version="0.1.2"; sha256="01sb3ilr58252yw0b2669vjdf8574br0n2n0ffwd86gc9f3islb3"; depends=[]; }; + polymapR = derive2 { name="polymapR"; version="1.0.16"; sha256="0j9zsgm4v78scsl4bblrf2rs691296p1sdimqqzs03d56cgaky04"; depends=[combinat doParallel foreach igraph knitr MDSMap]; }; polynom = derive2 { name="polynom"; version="1.3-9"; sha256="1s4xxv5rvpigawknvq27v9vzvs83phfsj5h8mim2lmf5bj950nnk"; depends=[]; }; polypoly = derive2 { name="polypoly"; version="0.0.2"; sha256="00c1hrnf575awvh0rlsnf6nkgi9p3fnqhd1knamkgb4icwi5s46d"; depends=[ggplot2 reshape2 rlang tibble]; }; polysat = derive2 { name="polysat"; version="1.7-2"; sha256="0ahx2pvlv2vdfiskwgawcrp447249ha0dq4qkhav3hpyvdg3in38"; depends=[]; }; @@ -9465,6 +9653,7 @@ in with self; { pompom = derive2 { name="pompom"; version="0.1.4"; sha256="0j37gq6lfccypclhrp7w3yfgsjbhfgqwg7x87r6rgywz6b3fnsgh"; depends=[ggplot2 lavaan qgraph reshape2]; }; pooh = derive2 { name="pooh"; version="0.3-2"; sha256="0qwa5j91aypasvsf4xcfbl6lz7llawdr38jiflzmfak2ad72rv7j"; depends=[]; }; pool = derive2 { name="pool"; version="0.1.4"; sha256="0k209n40l2kwahy7b6hjwj1l19pdhnnq36jzxjmhv5zdad7dmckq"; depends=[DBI dbplyr dplyr later R6]; }; + poolfstat = derive2 { name="poolfstat"; version="0.0.1"; sha256="1g6qx4518cr77wdlbicda68jm2yji24h14mjv5sq7zq241h4ailh"; depends=[]; }; pop = derive2 { name="pop"; version="0.1"; sha256="0hbxdrkasb69x7ipddvyrzl5vvc7dd6rzj1vy7v3chg3rzgq89cj"; depends=[igraph MASS]; }; pop_wolf = derive2 { name="pop.wolf"; version="0.1"; sha256="19n00xv47v9j7slvm2ykzlksjfwjzimf88b3nk0y0192c29sdc9x"; depends=[abind]; }; popEpi = derive2 { name="popEpi"; version="0.4.4"; sha256="010nsb3jlz769i8srkd3528a52h9gpw7q7gn4vraz9nx8g8585bs"; depends=[data_table Epi survival]; }; @@ -9472,10 +9661,10 @@ in with self; { popRange = derive2 { name="popRange"; version="1.1.3"; sha256="0kkz6va0p8zv3skaqqcpw42014d9x9x4ilx0czz91qf46h61jgb0"; depends=[findpython]; }; popReconstruct = derive2 { name="popReconstruct"; version="1.0-4"; sha256="14lp0hfnzbiw81fnq7gzpr4lxyfh3g0428rm9jwjh631irz3fcc9"; depends=[coda]; }; popbio = derive2 { name="popbio"; version="2.4.3"; sha256="1c34izyp6gpic3yv1rhg1snv2irw0bj9r1w9b892l7x0mxxmn2bl"; depends=[]; }; - popdemo = derive2 { name="popdemo"; version="0.2-3"; sha256="0r3qdvwjwqzqxk3zp9vfzxwmc5fhjzn0ka91b37g62nanwxiyayw"; depends=[expm]; }; + popdemo = derive2 { name="popdemo"; version="1.3-0"; sha256="0760ajqaq822m0j092gdqzhgw1mk413k09mmmwyzb0jzj6bd15q3"; depends=[expm MCMCpack]; }; popkin = derive2 { name="popkin"; version="1.0.5"; sha256="147ic0d7cgs4x9vz4jm4wd6ckikn0s8a0q1mknmcrcfisq8zim75"; depends=[RColorBrewer Rcpp RcppEigen]; }; poplite = derive2 { name="poplite"; version="0.99.19"; sha256="0y1l21clp9b5m50chqnqmvyd6rsk6xgn2bqf1877gx3h1qidh5fm"; depends=[DBI dbplyr dplyr igraph lazyeval RSQLite]; }; - poppr = derive2 { name="poppr"; version="2.6.1"; sha256="1ib6z5rpx8xr5wfvjiy56fn9vgjda4d7x16n6wn4377b5fi4l3zp"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas phangorn rlang shiny vegan]; }; + poppr = derive2 { name="poppr"; version="2.7.1"; sha256="01g2kcbrlnfw27yrvf3wzj68r5h8xif5baalx1rdfp16v49jkx34"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas phangorn polysat rlang shiny vegan]; }; popprxl = derive2 { name="popprxl"; version="0.1.3"; sha256="1l842zgn04s8ghbcp8s2lzg7lgc809xd7hg9crnyp23c2cr0jlvi"; depends=[poppr readxl]; }; popsom = derive2 { name="popsom"; version="4.2"; sha256="11d6z3qsq94k0557pnwa0h4pc718360lvg9jkblp8abnj52lcvvv"; depends=[class fields ggplot2 som]; }; poptrend = derive2 { name="poptrend"; version="0.1.0"; sha256="0hypxpb18azg6q1mqrphbx3x262h9ybwhlkb8fyd6vr7jjb5wn3h"; depends=[mgcv]; }; @@ -9483,7 +9672,7 @@ in with self; { portes = derive2 { name="portes"; version="2.1-4"; sha256="09liy2bia76h5dh21s8skq9pj8k4wpq5agwrmr1pnvlpgc8m2b60"; depends=[]; }; portfolio = derive2 { name="portfolio"; version="0.4-7"; sha256="0gs1a4qh68xsvl7yi6mz67lamwlqyqjbljpyax795piv46kkm06p"; depends=[lattice nlme]; }; portfolioSim = derive2 { name="portfolioSim"; version="0.2-7"; sha256="1vf46882ys06ia6gfiibxx1b1g81xrg0zzman9hvsj4iky3pwbar"; depends=[lattice portfolio]; }; - postGIStools = derive2 { name="postGIStools"; version="0.2.1"; sha256="1dmf77xpy61pqis3j9qzjjksmm9hkyhzxqdmjajpj7rkbqhl5qvp"; depends=[DBI jsonlite rgdal rgeos RPostgreSQL sp stringr]; }; + postGIStools = derive2 { name="postGIStools"; version="0.2.2"; sha256="1d1igv17bj17d0nmavvn5814nqb7k0hs2cjbaqgjd6ip1wcclfxz"; depends=[DBI jsonlite rgdal rgeos RPostgreSQL sp stringr]; }; postlightmercury = derive2 { name="postlightmercury"; version="1.2"; sha256="1345ckp50jplcdqp3a250c6mhapqh9322jzpxj5dyqmbg2nmgp9i"; depends=[crul jsonlite purrr rvest tibble xml2]; }; potts = derive2 { name="potts"; version="0.5-7"; sha256="194996wr4rnpr42xqfi5yrcnxvd82all2fxki95dklr2qfjxg98a"; depends=[]; }; powdist = derive2 { name="powdist"; version="0.1.4"; sha256="1my88ag5q9hwkn2wy79jl9008gpvg0bsrnyc81gkdfi7pjh2mp1z"; depends=[gamlss_dist normalp rmutil]; }; @@ -9495,19 +9684,19 @@ in with self; { powerGWASinteraction = derive2 { name="powerGWASinteraction"; version="1.1.3"; sha256="1i8gfsk9qzx54yn661i4x9k7n7b6r1jd808wv1hcq7870mzyb27k"; depends=[mvtnorm pwr]; }; powerMediation = derive2 { name="powerMediation"; version="0.2.9"; sha256="1rk8h8qn4b68ra5h5hiy9fvvbpskj9y806rwrvl1l7gs7xlmji7l"; depends=[]; }; powerSurvEpi = derive2 { name="powerSurvEpi"; version="0.1.0"; sha256="1xxicvw113mc2y889rklws3xml5z64sgjpn4wg95gbw6nadch7zz"; depends=[survival]; }; - powerbydesign = derive2 { name="powerbydesign"; version="1.0.3"; sha256="0dv4j0kwdzvxnq587vs1dsy2yci3v3q2smncpscpcsalp38rvx4i"; depends=[gdata ggplot2 lme4 MASS plyr reshape2 stringr]; }; - powerlmm = derive2 { name="powerlmm"; version="0.1.0"; sha256="0fsd3h94va5hn0nqxdalchw02s4daxq8dlgdxb5a4nigg64lfkm2"; depends=[ggplot2 ggsci gridExtra lme4 lmerTest MASS Matrix pbmcapply scales testthat]; }; + powerbydesign = derive2 { name="powerbydesign"; version="1.0.4"; sha256="0xd4hylx7jl4ksycz5gfjcgy92mh5c9d4r34ap1g81ybmyk7yrsj"; depends=[gdata ggplot2 lme4 MASS plyr reshape2 stringr]; }; + powerlmm = derive2 { name="powerlmm"; version="0.3.0"; sha256="1prg1dw0pzyz4vc7a936bgx56227ab34b3ipwxn1mm8n03xk1zqc"; depends=[lme4 MASS Matrix scales]; }; powerpkg = derive2 { name="powerpkg"; version="1.5"; sha256="0mbk2fda2fvyp1h5lk5b1fg398xybbjv0z6kdx7w7xj345misf7l"; depends=[]; }; powerplus = derive2 { name="powerplus"; version="3.1"; sha256="0ayp6x34hkzgris4j3zbbs0r23n81bhww3wgfyy630ri4sk6brrn"; depends=[complexplus expm MASS Matrix phonTools]; }; ppcSpatial = derive2 { name="ppcSpatial"; version="0.2.0"; sha256="1gi57zngc42wcrihg29nn7qa3gaq105ckp76qmczkldshlpd7x4r"; depends=[dplyr ggplot2 htmltools htmlwidgets leaflet magrittr PakPC2017 rgdal scales shiny tidyr tmap]; }; ppcc = derive2 { name="ppcc"; version="1.0"; sha256="022c8w7ws7fw6yy572rn6m8ki14d2ph7nd2hk2c6mmx2c4lbc20v"; depends=[]; }; ppclust = derive2 { name="ppclust"; version="0.1.1"; sha256="10fcyayda634lg5g992g21casqx5k0jni9r30km5rczzib7cz9gg"; depends=[inaparc MASS]; }; ppcor = derive2 { name="ppcor"; version="1.1"; sha256="1x9b2kb8s0bp92b17gby0jwzzr3i4cf3ap9c4nq7m8fav72g0y3a"; depends=[MASS]; }; - ppiPre = derive2 { name="ppiPre"; version="1.9"; sha256="07k2mriyz1wmxb5gka0637q4pmvnmd1j16mnkkdrsx252klgjsdw"; depends=[AnnotationDbi e1071 GO_db GOSemSim igraph]; }; ppitables = derive2 { name="ppitables"; version="0.1.2"; sha256="1hw25zvvbmc6vxbhcrpz9xkwc6lbc9v1r77fil3gv2wm5n672s4h"; depends=[]; }; ppls = derive2 { name="ppls"; version="1.6-1"; sha256="1r3h4pf79bkzpqdvyg33nwjabsqfv7r8a4ziq2zwx5vvm7mdy7pd"; depends=[MASS]; }; ppmlasso = derive2 { name="ppmlasso"; version="1.1"; sha256="1w13p1wjl1csds1xfc79m44rlym9id9gwnp3q0bzw05f35zbfryg"; depends=[spatstat]; }; pps = derive2 { name="pps"; version="0.94"; sha256="0sirxpagqc2ghc01zc6q4dk691six9wkgknfbwaqxbxvda3hcmyq"; depends=[]; }; + ppsbm = derive2 { name="ppsbm"; version="0.2.2"; sha256="0y4whxv14jqx7mqxj7n427vpbxb5rkwj8xvx0mj4knnwy9v437z4"; depends=[clue gtools Rfast]; }; pqantimalarials = derive2 { name="pqantimalarials"; version="0.2"; sha256="0azxkf1rvk9cyzr4gbp4y2vcxrxw3d4f002d5gjkvv1f4kx8faw1"; depends=[plyr RColorBrewer reshape2 shiny]; }; prLogistic = derive2 { name="prLogistic"; version="1.2"; sha256="1abwz7nqkz2qbyqyr603kl9a3rkad3f4vxhck6a9kl80xrmfrj9s"; depends=[boot Hmisc lme4]; }; prabclus = derive2 { name="prabclus"; version="2.2-6"; sha256="0qjsxrx6yv338bxm4ki0w9h8hind1l98abdrz828588bwj02jya1"; depends=[MASS mclust]; }; @@ -9526,7 +9715,7 @@ in with self; { precintcon = derive2 { name="precintcon"; version="2.3.0"; sha256="1sf0mfqa77aqhbx3hg8pv582ibmfnv6vigqcd3xqsbq7nigy2ms9"; depends=[ggplot2 scales]; }; precrec = derive2 { name="precrec"; version="0.9.1"; sha256="0kppl4x8ji8hzll5wss1nzlk8qvf4g78f14x4c2b8dcxjikgl939"; depends=[assertthat data_table ggplot2 gridExtra Rcpp]; }; predatory = derive2 { name="predatory"; version="1.2"; sha256="1qbkifx16ixzimshm8lsg3d1y7cj453ksn8cpwy03xql6b19r8x4"; depends=[readr stringr]; }; - prediction = derive2 { name="prediction"; version="0.2.0"; sha256="09jlwk3fh7lkka9vsbr0bp7bpaf2p7q96qb8mv56rcmfrsf5446c"; depends=[]; }; + prediction = derive2 { name="prediction"; version="0.3.2"; sha256="1a65006i4gs9syvc240zzhx91mvf49jy60grz375lq0bzkxy4ly0"; depends=[data_table]; }; predictionInterval = derive2 { name="predictionInterval"; version="1.0.0"; sha256="029hc57cblfcbqckrghf95l2rkn7acgb4yr36da01bx8bmpww0bn"; depends=[ggplot2 MASS MBESS pbapply]; }; predictmeans = derive2 { name="predictmeans"; version="0.99"; sha256="1qfqh21d3m0k2491hv5rl5k4v49j5089xsdk3bxicp30l512rax0"; depends=[ggplot2 lattice lme4 nlme pbkrtest plyr]; }; predkmeans = derive2 { name="predkmeans"; version="0.1.0"; sha256="1xmzdv35hxnslffkj8nbahhxrxmv7995pkdq2igw72x9wbryqlhs"; depends=[e1071 maxLik mgcv Rcpp RcppArmadillo]; }; @@ -9536,6 +9725,7 @@ in with self; { preference = derive2 { name="preference"; version="0.1.2"; sha256="113car6miax832kl0gzlqawwq3f5xbp06fz1ygz9nkzxh7mpmi11"; depends=[]; }; prefmod = derive2 { name="prefmod"; version="0.8-34"; sha256="1fkqp75w3im6b0l4sfs1yr2id8ffp2xbpb6lkgnv833cri787d5x"; depends=[colorspace gnm]; }; prepdat = derive2 { name="prepdat"; version="1.0.8"; sha256="19rxyss96cmjhzm69f6l1cd3vkw3wskzhxnbmrz4546x00gf9g5v"; depends=[dplyr psych reshape2]; }; + prepplot = derive2 { name="prepplot"; version="0.7"; sha256="1yqiq78iqsk49ky913x4h8f3638blyamrwdhhcmzfgy4n7dnk11x"; depends=[plotrix shape]; }; preprocomb = derive2 { name="preprocomb"; version="0.3.0"; sha256="08dhzil8prmjb6if0yba9pjncfxf5zzvlrrabva7c5jhny806c5g"; depends=[arules caret clustertend DMwR doParallel e1071 foreach randomForest zoo]; }; preprosim = derive2 { name="preprosim"; version="0.2.0"; sha256="1z10ranfal51vzsnndfaw5aqddh2w1xx8h50j1p7gx4fi90d0waq"; depends=[caret DMwR doParallel e1071 foreach ggplot2 reshape2]; }; preproviz = derive2 { name="preproviz"; version="0.2.0"; sha256="0jb85qkzywsd2iyfynd8ngkc136m4qc38phc3fgxm2qw30dacmyh"; depends=[caret ClustOfVar DMwR ggdendro ggplot2 gridExtra randomForest reshape2]; }; @@ -9550,6 +9740,7 @@ in with self; { prettyunits = derive2 { name="prettyunits"; version="1.0.2"; sha256="0p3z42hnk53x7ky4d1dr2brf7p8gv3agxr71i99m01n2hq2ri91m"; depends=[assertthat magrittr]; }; prevR = derive2 { name="prevR"; version="3.3"; sha256="11syifnv0mgbybsphgaj3a2j29p2q0l4y4w008n2r9s359arjj8m"; depends=[directlabels fields foreign GenKern ggplot2 gstat maptools rgdal sp]; }; prevalence = derive2 { name="prevalence"; version="0.4.0"; sha256="0vnmglxj1p66sgkw4ffc4wgn0w4s281fk2yifx5cn4svwijv30q0"; depends=[coda rjags]; }; + pricesensitivitymeter = derive2 { name="pricesensitivitymeter"; version="0.2.1"; sha256="0yy2ndvmcwb5syb1km0hkv73mwlnnf53mpqp02p98xib1bm4a1w4"; depends=[]; }; prim = derive2 { name="prim"; version="1.0.16"; sha256="0i5jpk798qbvyv9adgjbzpg4dvf7x51bcgbdp38fzdnam6g88y5a"; depends=[misc3d rgl]; }; primefactr = derive2 { name="primefactr"; version="0.1.0"; sha256="1p0hlf0llyfccg0pa2fccxp8zzhwsyrpd18d8ih1z7mx88kyrhwm"; depends=[]; }; primer = derive2 { name="primer"; version="1.0"; sha256="0vkq794a9qmz9klgzz7xz35msnmhdaq3f91lcix762wlchz6v7sg"; depends=[deSolve lattice]; }; @@ -9558,7 +9749,7 @@ in with self; { princurve = derive2 { name="princurve"; version="1.1-12"; sha256="19fprwpfhgv6n6ann978ilwhh58qi443q25z01qzxml4b5jzsd7w"; depends=[]; }; prinsimp = derive2 { name="prinsimp"; version="0.8-8"; sha256="074a27ml0x0m23hlznv6qz6wvfqkv08qxh3v1sbkl9nxrc7ak4vn"; depends=[]; }; printr = derive2 { name="printr"; version="0.1"; sha256="13yqqcwfqnbhvcxwrr6j45qhnbxng3qwn2ygkr809gibg9grw471"; depends=[knitr]; }; - prioritizr = derive2 { name="prioritizr"; version="3.0.3"; sha256="111y7zdalai0wd2w1a9fn89axz568gxn91x2zp2x3101y263q1kx"; depends=[assertthat BH data_table doParallel magrittr Matrix plyr proto raster Rcpp RcppArmadillo rgeos sp uuid]; }; + prioritizr = derive2 { name="prioritizr"; version="3.0.4"; sha256="0c82v0vz7b95milgzbbh5z19h1qmybb44lxxmw5407pqrdv2fihl"; depends=[assertthat BH data_table doParallel magrittr Matrix plyr proto raster Rcpp RcppArmadillo rgeos sp uuid]; }; prioritizrdata = derive2 { name="prioritizrdata"; version="0.2.1"; sha256="0mskny9j6dwfbndzqpbmqh552vc86xqwjdpjk2h64qza2abyh5vr"; depends=[raster sp]; }; prioritylasso = derive2 { name="prioritylasso"; version="0.2.1"; sha256="1wcykrhv1d762h7k7qkvnsjk7l6sincmh6vc6wmgpmmwx5nch70x"; depends=[glmnet survival]; }; prism = derive2 { name="prism"; version="0.0.7"; sha256="03z1m09vf2gd277xp3y5nhvgrp0fnbr2x0r9b92kp46ca09fq9y8"; depends=[ggplot2 httr raster]; }; @@ -9571,19 +9762,19 @@ in with self; { probsvm = derive2 { name="probsvm"; version="1.00"; sha256="1k0zysym7ncmjy9h7whwi49qsfkpxfk7chfdjrydl6hn6pscis37"; depends=[kernlab]; }; proccalibrad = derive2 { name="proccalibrad"; version="0.14"; sha256="0vr55rpcqh9wvy3bklssrimp42x85w3sanjgshfij657v68vmx46"; depends=[]; }; processcontrol = derive2 { name="processcontrol"; version="0.1.0"; sha256="0c0bksgq24blfkdgp5bn49sjnaajrg5bag8qzb5zffxbhnm4s30x"; depends=[plyr]; }; - processmapR = derive2 { name="processmapR"; version="0.2.1"; sha256="0qlz6av6f0ik62md0wa5il3id55rnbwc6i34sxjhv9awwvm2ygrv"; depends=[bupaR data_table DiagrammeR dplyr edeaR forcats ggplot2 ggthemes glue hms miniUI plotly purrr RColorBrewer rlang scales shiny stringr]; }; + processmapR = derive2 { name="processmapR"; version="0.3.0"; sha256="056g379hi80r1hxd77axayb4sa5a97bvxrlsh0nqw6pam5ycqr53"; depends=[bupaR data_table DiagrammeR dplyr edeaR forcats ggplot2 ggthemes glue hms miniUI plotly purrr RColorBrewer rlang scales shiny stringr]; }; processmonitR = derive2 { name="processmonitR"; version="0.1.0"; sha256="1ckr438yifpsh095j6bb65dq3rdm7cfm8k7qsjmcqwjkww4j74z8"; depends=[bupaR dplyr edeaR ggplot2 magrittr miniUI shiny]; }; processx = derive2 { name="processx"; version="2.0.0.1"; sha256="0yw23lp9xjvbpswzghkmjiayw7p19hbvmgv58k3i6b8g5nav4qcg"; depends=[assertthat crayon debugme R6]; }; prodest = derive2 { name="prodest"; version="0.1.1"; sha256="1j8gqxswwvnd45givadlvblnsc3qli228gz77d7alc19qf1wrrvz"; depends=[DEoptim dplyr Matrix Rsolnp]; }; prodigenr = derive2 { name="prodigenr"; version="0.3.0"; sha256="1217l9r012xrgzna1bf9z31n2gw36h6grga3949kg7ghxrzjbm4q"; depends=[devtools]; }; - prodlim = derive2 { name="prodlim"; version="1.6.1"; sha256="0m51rkivx1zr6whdqwj66jpnkmp4385m06kkha3dp8qqf4jna9iz"; depends=[KernSmooth lava Rcpp survival]; }; - productivity = derive2 { name="productivity"; version="1.0.0"; sha256="1yf1w9pss8cbhlqg1zmsmr5qchf7sdvl67m1zzgxf8pplj2pzrzm"; depends=[doParallel foreach plm Rglpk]; }; + prodlim = derive2 { name="prodlim"; version="2018.04.18"; sha256="1aslq87sqwikh8chxc378r38146y7kv79zz0kcq3j93ivx7va8jb"; depends=[KernSmooth lava Rcpp survival]; }; + productivity = derive2 { name="productivity"; version="1.1.0"; sha256="1g8b4vlyqq3xyzd4dki01glhc3g9j3ywgwpxylkmzp0ivqic53yc"; depends=[doParallel foreach iterators lpSolveAPI]; }; productplots = derive2 { name="productplots"; version="0.1.1"; sha256="1igs6d0qwgsfk0z3vxabgv5kva9w2kpzi535gjfdrbx34j4pf3gx"; depends=[ggplot2 plyr]; }; prof_tree = derive2 { name="prof.tree"; version="0.1.0"; sha256="0mjvxaacrgkzl0f1wn3fpgah4jh720safni66ri0dnriwcxis6rz"; depends=[data_tree]; }; profdpm = derive2 { name="profdpm"; version="3.3"; sha256="07lhjavrx4fa5950w928mfpddmmnmvdapl5n6mv49m8h3bxs4nmy"; depends=[]; }; profile = derive2 { name="profile"; version="1.0"; sha256="0m7fm490gqkbmnbdq3lac87zqb9qyx6546rlpa130rq1jnlgxfp6"; depends=[rlang tibble withr]; }; profileModel = derive2 { name="profileModel"; version="0.5-9"; sha256="1p9b9jr5842im195d60ja82pp7vbk85vs8b0r3fnf62j4b92aky9"; depends=[]; }; - profileR = derive2 { name="profileR"; version="0.3-4"; sha256="1vinqddhd4jbncn37rbypja7ili3kwmj2sacgf491s94zil4ijik"; depends=[ggplot2 lavaan RColorBrewer reshape]; }; + profileR = derive2 { name="profileR"; version="0.3-5"; sha256="0fgc7585a7194c67irafjnx8g2j6mn3qhcfn76c6dh28clp20qp9"; depends=[ggplot2 lavaan RColorBrewer reshape]; }; profilr = derive2 { name="profilr"; version="0.1.0"; sha256="0rw5cjvvrgsdmhgrsaw4skfdk8h488b6mkmibgjj3dd3x0j3caq6"; depends=[]; }; profmem = derive2 { name="profmem"; version="0.5.0"; sha256="152dka39p9i17ydlhc92y6x6i8girn3wab1ycbqb9kva07j9d2h8"; depends=[]; }; profr = derive2 { name="profr"; version="0.3.1"; sha256="1w06mm89apggy6wc273b2nsp95smajr8sf3dwshykivv7mhkxs5d"; depends=[plyr stringr]; }; @@ -9596,7 +9787,8 @@ in with self; { projections = derive2 { name="projections"; version="0.0.1"; sha256="1qrgazxdihzp1i4aghkwkh6q5g1all39bvd83gwh4hj9pxm2w5zy"; depends=[distcrete ggplot2 incidence]; }; projector = derive2 { name="projector"; version="0.0.2"; sha256="15n5b2xgs0zj87pc3svlmnkjrxgkjkx941g8bs3ms90fg7nh2drc"; depends=[assertthat dbscan plotly RColorBrewer RcppAnnoy Rtsne shiny shinyjs shinythemes]; }; projmanr = derive2 { name="projmanr"; version="0.1.1"; sha256="0mmfmp5qf4r75q4hjbra2pxym77m16g28n94z5yj2qdzq46hgl4c"; depends=[ggplot2 igraph R6 tidyr]; }; - projpred = derive2 { name="projpred"; version="0.7.0"; sha256="1n2lwzc3hvjr4d6csc2nqlxqcrr979h52lfvbr81alybkg1nbqch"; depends=[ggplot2 loo Rcpp RcppArmadillo rstan rstanarm]; }; + projpred = derive2 { name="projpred"; version="0.8.0"; sha256="06wi8lc88xm45drqhb3mcq5l1g1zm2msgi1m0857vldg6828gjbq"; depends=[ggplot2 loo Rcpp RcppArmadillo rngtools rstan rstanarm]; }; + promises = derive2 { name="promises"; version="1.0.1"; sha256="0n2mlv6bvfb4yhgcml696l9vkbw21pz0smqylivr606z99rwgny2"; depends=[later magrittr R6 Rcpp rlang]; }; promote = derive2 { name="promote"; version="1.0.1"; sha256="1f8f5rm25fx4146hf3rds2lb7qpfz17fa5r2a1f4s3q5p86svgqn"; depends=[httr jsonlite stringr]; }; prop_comb_RR = derive2 { name="prop.comb.RR"; version="1.2"; sha256="10s52fkq7rv6v4gw1yd46f0fbg89ksim0qhgb5jbglzrqh585ny5"; depends=[rootSolve]; }; propOverlap = derive2 { name="propOverlap"; version="1.0"; sha256="0q72z9vbkpll4i3wy3fq06rz97in2cm3jjnvl6p9w8qc44zjlcyl"; depends=[Biobase]; }; @@ -9604,7 +9796,7 @@ in with self; { properties = derive2 { name="properties"; version="0.0-9"; sha256="1zd66cg31yd53rqsc0cwxhlpfn7kvc67qdh3vyj9qib8kwxaw1zl"; depends=[]; }; prophet = derive2 { name="prophet"; version="0.2.1"; sha256="10qd3w9jgk3d53465005b0di2lxa6cg67lj81fzmf2h919ai9i5m"; depends=[dplyr extraDistr ggplot2 Rcpp rstan scales tidyr]; }; proportion = derive2 { name="proportion"; version="2.0.0"; sha256="0a71f6hz6blb7550m9x0di84vp51yjhnn952301rwlrh3axf6dbr"; depends=[ggplot2 TeachingDemos]; }; - propr = derive2 { name="propr"; version="3.1.4"; sha256="1hggj926zphhg6v09bbrv77rp11bg6vciy3xfnkqi2hakjw3ak59"; depends=[fastcluster ggplot2 igraph Rcpp]; }; + propr = derive2 { name="propr"; version="3.1.9"; sha256="0bwkn923id6wd9c4qas6j363i9v4ziwvcr8d0rijxyvg23vjaq6x"; depends=[fastcluster ggplot2 igraph Rcpp]; }; prospectr = derive2 { name="prospectr"; version="0.1.3"; sha256="18lh03xg6bgzsdsl56bjd63xdp16sqgr3s326sgifkkak8ffbv7q"; depends=[foreach iterators Rcpp RcppArmadillo]; }; protViz = derive2 { name="protViz"; version="0.2.45"; sha256="0mvq0p0lnxwpia1znyizha5gdj6f9i07nghp3gv9kfficlq3fw03"; depends=[Rcpp]; }; proteomicdesign = derive2 { name="proteomicdesign"; version="2.0"; sha256="01s47pgwxy4xx10f3qmbfv59gbaj0qw017kpkpsn33s8w7ad63r0"; depends=[MASS]; }; @@ -9619,7 +9811,7 @@ in with self; { protr = derive2 { name="protr"; version="1.5-0"; sha256="1mi14hph6cqdsgjw4p00miaa4bh2axkwfcmxaiv7f7v4dk8i52y1"; depends=[]; }; proustr = derive2 { name="proustr"; version="0.2.1"; sha256="17syaxfrwm9kh5q825hj7bsrvi4h9avpdabw9y0vq20y87w8cq1s"; depends=[assertthat dplyr magrittr purrr rlang SnowballC stringr tidyr tokenizers]; }; provenance = derive2 { name="provenance"; version="1.9"; sha256="1d40k85cxnnxy480ylvy6wwswgf8hbxgcbansx90hyg9cb3rvhil"; depends=[MASS]; }; - proxy = derive2 { name="proxy"; version="0.4-21"; sha256="1vih8gsfzv97h5c8ixd1qjnn02i7fzla2p9fdj2wpisqhx0p0xv0"; depends=[]; }; + proxy = derive2 { name="proxy"; version="0.4-22"; sha256="0l0ff8irmmvic941is290hd5vszyhaj5nfwna4v3w9c1zk5nr1ma"; depends=[]; }; prozor = derive2 { name="prozor"; version="0.2.3"; sha256="1686lfmzmzl1488xnppv95hfr83gf67xfzqsw49gdas0aba3plhh"; depends=[AhoCorasickTrie doParallel foreach Matrix plyr seqinr stringr]; }; prrd = derive2 { name="prrd"; version="0.0.2"; sha256="0ifs55yqvwbcs3xyc90yi763fgavdhajk1ba73g1kchn2ak39qhb"; depends=[config crayon data_table DBI liteq RSQLite]; }; pryr = derive2 { name="pryr"; version="0.1.4"; sha256="06vj5xl9x37kbd3l5bw7sbgfdnp37spvrjrn976rxi04clqk966k"; depends=[codetools Rcpp stringr]; }; @@ -9632,6 +9824,7 @@ in with self; { pse = derive2 { name="pse"; version="0.4.7"; sha256="0kigfzsvx3gw7jwym4f19dydwwarwxgmha7hpy54gg0zzi4k9icl"; depends=[boot Hmisc]; }; pseudo = derive2 { name="pseudo"; version="1.4.3"; sha256="0ccf3gz2g7g5y4acpj2qnb39hrghhdganizlddg6rx7al869fffs"; depends=[geepack KMsurv]; }; pseval = derive2 { name="pseval"; version="1.3.0"; sha256="1iv3fa7ar9i7v9j5axbasmn8l8nvry4zvmb7fd8aql82f22szmbj"; depends=[survival]; }; + psgp = derive2 { name="psgp"; version="0.3-17"; sha256="11rx3xim9jx8klpz1p2xj1laimd5q5qs9mvigbh48gsjrm0pnd5v"; depends=[automap doParallel foreach gstat intamap Rcpp RcppArmadillo rgdal sp]; }; psidR = derive2 { name="psidR"; version="1.4"; sha256="1whdjsab5cihlq4gp06xafl3zg7z0cjb4622d23v24igz7kr0ic2"; depends=[data_table foreign RCurl SAScii]; }; pso = derive2 { name="pso"; version="1.0.3"; sha256="0alar695c6kc1rsvwipsrvlxc93f3sy9l0yhp0mggyqgxkkvy406"; depends=[]; }; psoptim = derive2 { name="psoptim"; version="1.0"; sha256="1yziabkd3h05cfl5jy5l8ji2y3w21acvxsq3inxyh0iwyr8qdkkl"; depends=[]; }; @@ -9640,9 +9833,9 @@ in with self; { pssm = derive2 { name="pssm"; version="1.1"; sha256="0r3d1mzc7bcz238lqq4y518400m2dqm5a1fb9gkfiari1ax099lv"; depends=[abind MASS MHadaptive numDeriv]; }; pstest = derive2 { name="pstest"; version="0.1.1"; sha256="0k8413ilpbz23v210wz80mli7ajpc8p7y4pbn1za371qw04b81c5"; depends=[harvestr]; }; psy = derive2 { name="psy"; version="1.1"; sha256="027whr670w65pf8f7x0vfk9wmadl6nn2idyi6z971069lf01wdlk"; depends=[]; }; - psych = derive2 { name="psych"; version="1.7.8"; sha256="0daismb8pdk392vdy304hqx0m3jx62gx3a0hygjygc125rhfla7k"; depends=[foreign lattice mnormt nlme]; }; - psychmeta = derive2 { name="psychmeta"; version="0.2.3"; sha256="0lfgsbvb1dplwbxfqim3q7lnf4sclngdik1l5cxl9rkdwb54lcy6"; depends=[boot dplyr fungible ggplot2 MASS metafor nor1mix progress reshape2 rtf tibble tidyr tmvtnorm]; }; - psycho = derive2 { name="psycho"; version="0.1.0"; sha256="0qfgq5sivr01jiglaykh3jqjz11zag8si1nmw0ffr28bp94gibrg"; depends=[dplyr ggcorrplot ggplot2 lmerTest MASS MuMIn nFactors ppcor psych purrr qgraph rstanarm stringr tidyr]; }; + psych = derive2 { name="psych"; version="1.8.3.3"; sha256="1zhp8j81nkzd65168zdw9ylypb9n07ajan21x0wqcn8jdbg970sg"; depends=[foreign lattice mnormt nlme]; }; + psychmeta = derive2 { name="psychmeta"; version="1.0.0"; sha256="0wbjq8908wnch45n4mblx1lxsp5r65jv2g9d46lar6qxrawqbaqg"; depends=[boot dplyr fungible ggplot2 knitr MASS metafor nor1mix progress RCurl RefManageR reshape2 rlang rmarkdown rtf stringr tibble tidyr tmvtnorm]; }; + psycho = derive2 { name="psycho"; version="0.1.4"; sha256="0drzr3svs76wx7ki6s4c5i27r5p309wgzdcpxz1j5i4ivvwhkl0b"; depends=[dplyr ggcorrplot ggplot2 lmerTest MASS MuMIn nFactors ppcor psych purrr qgraph rstanarm stringr tidyr]; }; psychometric = derive2 { name="psychometric"; version="2.2"; sha256="1b7cx6icixh8k3bv60fqxjjks23qn09vlcimqfv2x3m3nkf8p1s9"; depends=[multilevel nlme]; }; psychomix = derive2 { name="psychomix"; version="1.1-4"; sha256="15yk3z11w4bzk6vljr13bkfhzycypww6blc1djb5iwl635xq1c49"; depends=[flexmix Formula lattice modeltools psychotools]; }; psychotools = derive2 { name="psychotools"; version="0.4-2"; sha256="04p5yb39c8j28q6brqsrw0dr1zvgpyzb7008v2kk3d5sncgl4dd0"; depends=[]; }; @@ -9656,12 +9849,13 @@ in with self; { ptwikiwords = derive2 { name="ptwikiwords"; version="0.0.3"; sha256="129dad1vy52sf97dqrkwa49vjhv2kvs4pmd5zvq8pxd51hqm6wy9"; depends=[]; }; ptycho = derive2 { name="ptycho"; version="1.1-4"; sha256="1llk3rpk0lf80vwvs23d6dqhgyic3a6sfjc393csj69hh01nrdvc"; depends=[coda plyr reshape2]; }; pubh = derive2 { name="pubh"; version="0.1.7"; sha256="0dha3adlbrxgkamlb5i2lcnqcsspqb30fmj0f2zhz0bh4i83lznb"; depends=[bookdown car descr Epi epiR epitools gee lattice latticeExtra lme4 lmtest MASS multcomp nlme nnet ordinal pander papeR rmdformats sandwich survival visreg]; }; - pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.11"; sha256="01b4dd28x3a25d0s8k0dwbcr6asaqh2b9c4fddg683i54q483lkd"; depends=[boot R2HTML RCurl XML]; }; + pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.12"; sha256="04zb5lbjdrhdpam4xmkcc947icsnias5pxbv2pwhvyhk7mz16nya"; depends=[boot R2HTML RCurl XML]; }; pullword = derive2 { name="pullword"; version="0.2"; sha256="14rln0nbd4k2cvf18iwvc56776b9g3m3cs67i7fgzabfrgj8y6db"; depends=[RCurl]; }; - pulsar = derive2 { name="pulsar"; version="0.3.1"; sha256="0y72wpxa9rqjzyqrfpl1sa06zpx6rbxi4jfncxzac8m534l5l7l5"; depends=[Matrix]; }; + pulsar = derive2 { name="pulsar"; version="0.3.2"; sha256="1zfkxksynrphfv6lpr7rc3g9k643840bgrdv9ic700984vxgg68m"; depends=[Matrix]; }; pulver = derive2 { name="pulver"; version="0.1.1"; sha256="0zj3a66hjing4a87lvhxlvdp72kpn0s2d6r5kc0pi06ls04r8sax"; depends=[DatABEL Rcpp]; }; pumilioR = derive2 { name="pumilioR"; version="1.3.1"; sha256="1791r5lkr6hafd2rz9f9nfy5vc03c4833f292khvd2cg43sb0bfc"; depends=[RCurl XML]; }; purge = derive2 { name="purge"; version="0.2.1"; sha256="1faf8mkaxsnj63wnig5rs50hd3j6vzaj0xkdz8kn0j7y2vvshp9p"; depends=[]; }; + purging = derive2 { name="purging"; version="1.0.0"; sha256="1b8f87jn6wyh4fp6b1660bd484wcf7xiajdg9dz2594aj1r94qsr"; depends=[MASS]; }; purrr = derive2 { name="purrr"; version="0.2.4"; sha256="0wgbnbrqncjpggg8f9bdpcd1gy351s5f0az5k8lc55cvs9lhz3gd"; depends=[magrittr rlang tibble]; }; purrrlyr = derive2 { name="purrrlyr"; version="0.0.2"; sha256="1wkngb87xmlkghsqjr7l5fhlj3a54prvg6v6hd0prn768xw4rc1c"; depends=[BH dplyr lazyeval magrittr purrr Rcpp]; }; pushoverr = derive2 { name="pushoverr"; version="1.0.0"; sha256="1zazrx0szx21ymn7zlkfqkhid0ar8jblnpnf5nycj0p7dbh6d0bd"; depends=[assertthat httr]; }; @@ -9673,7 +9867,7 @@ in with self; { pwr = derive2 { name="pwr"; version="1.2-2"; sha256="0r5g781lr677vp3zyhgmi7r68c87l8gd05l1s3ffnxgn5wf043sm"; depends=[]; }; pwr2 = derive2 { name="pwr2"; version="1.0"; sha256="0zfv7z5yymw310r1sqm8ivsc2pv6dgk2k4b1axmm92gsaj53cn7p"; depends=[]; }; pwrAB = derive2 { name="pwrAB"; version="0.1.0"; sha256="0ifyw40m9gsijw3vm9qb8qk4yydmdixfdpdp45x2hk93j8v61jm1"; depends=[]; }; - pwrFDR = derive2 { name="pwrFDR"; version="1.85"; sha256="1al8dh5h32lipnqfa823wwx7nsrz8z3fadl7hz4qvj8vpfijpz1i"; depends=[]; }; + pwrFDR = derive2 { name="pwrFDR"; version="1.90"; sha256="1lphq62k33wd1ay18gyl62yg6d57j2hhyk1pxz67qv5ywj73r34s"; depends=[]; }; pwrRasch = derive2 { name="pwrRasch"; version="0.1-2"; sha256="13fr4yfk8aky1vv36pllx673l4lg9q7i661vbyn2zabyizd2rw3b"; depends=[]; }; pwt = derive2 { name="pwt"; version="7.1-1"; sha256="0926viwmwldmzlzbnjfijh00wrhgb0h4h0mlrls71pi5pjfldifa"; depends=[]; }; pwt8 = derive2 { name="pwt8"; version="8.1-1"; sha256="1iig0x90ilzh3hdki0h33qgrra8r94rw4bk1x8y7i6c1may8y0v6"; depends=[]; }; @@ -9681,6 +9875,7 @@ in with self; { pxR = derive2 { name="pxR"; version="0.42.2"; sha256="1q1xwsrs1ch1a1d1clz6sl7vnsyz5wjqivczk5n5d772y4w60bz5"; depends=[plyr reshape2 RJSONIO stringr]; }; pxweb = derive2 { name="pxweb"; version="0.6.3"; sha256="106nb0a3v295cam8ixhdwpgjhwq8p71c2z5c49s6xnqwmf6rbd0h"; depends=[data_table httr plyr RJSONIO stringr]; }; pycno = derive2 { name="pycno"; version="1.2"; sha256="0ha5css95xb98dq6qk98gnp1al32gy6w5fkz74255vs4hmkwfzw2"; depends=[maptools rgeos sp]; }; + pyinit = derive2 { name="pyinit"; version="1.0.2"; sha256="148b8l5a8c636rgm8dwd8v6ggw9qmkafc5a40bciqc4rk09lfhl3"; depends=[robustbase]; }; pyramid = derive2 { name="pyramid"; version="1.4"; sha256="0hh0hmckicl0r2r9zlf693j65jr9jgmiz643j2asp57nbs99lgxz"; depends=[]; }; qCBA = derive2 { name="qCBA"; version="0.3.1"; sha256="0lr97hig9c4l9k7vjalvgar4f1dic1lqf91li4q63j07lgdyvh4c"; depends=[arc arules rJava]; }; qGaussian = derive2 { name="qGaussian"; version="0.1.6"; sha256="0j8n4y4yzidkp52db73zv2snx0kwpg3aiz7vr82ybq3x9scy8c4n"; depends=[Rcpp robustbase zipfR]; }; @@ -9711,7 +9906,7 @@ in with self; { qlcData = derive2 { name="qlcData"; version="0.2.1"; sha256="0n1r7462zmyzkyi7mp3hf7pn7bgw1m1zs9flm3n199kjm8f6yyzy"; depends=[ape data_tree docopt phytools shiny stringi yaml]; }; qlcMatrix = derive2 { name="qlcMatrix"; version="0.9.5"; sha256="0fm49iydbjp264h9mkk8qfblbvg4l3bfcnphxyhcv3n27m0w44sf"; depends=[Matrix slam]; }; qlcVisualize = derive2 { name="qlcVisualize"; version="0.1.0"; sha256="13rc4z7rz7vngrkxq09flhszvcbg6i7drdkdp8kmvgcxf0im6lv0"; depends=[alphahull fields mapdata mapplots maps maptools MASS qlcMatrix raster seriation sp spatstat]; }; - qle = derive2 { name="qle"; version="0.16-6"; sha256="1gah72vv7zfaxl2i9r58qzpkml7pkspxffd7jaf9z93izrzcsp74"; depends=[digest expm lhs mvtnorm nloptr]; }; + qle = derive2 { name="qle"; version="0.17-1"; sha256="1zsvmnxdfd6avr14z5101i4kmks87yrsn15wiq5sx8gsfbxksjkj"; depends=[digest expm lhs mvtnorm nloptr]; }; qmap = derive2 { name="qmap"; version="1.0-4"; sha256="02xvq1mw83gln7phacbi3vhkvb100crggbldv13mhwq3wjnmg5k2"; depends=[fitdistrplus]; }; qmethod = derive2 { name="qmethod"; version="1.5.2"; sha256="1snllw82cijl7qgmgkn2x1k3x43x0hxbvh5mx5sffrma9kkv2fii"; depends=[digest GPArotation knitr psych xtable]; }; qmrparser = derive2 { name="qmrparser"; version="0.1.5"; sha256="0sl9n42j0dx9jqz5vv029ra6dyrg9v7mvdlya8ps3vyd6fjhwh0z"; depends=[]; }; @@ -9742,9 +9937,9 @@ in with self; { qtlbook = derive2 { name="qtlbook"; version="0.18-6"; sha256="0kbz7icp6fzl2bgk50fcg8x704aijpz3xbqrzraj7qa3z8gakaj6"; depends=[qtl]; }; qtlc = derive2 { name="qtlc"; version="1.0"; sha256="17ij4alx4qg556b5kq7qsjygj5jf8iyx1f0v52pvx1z2sm6nppww"; depends=[plot3D rgl tiff]; }; qtlcharts = derive2 { name="qtlcharts"; version="0.9-6"; sha256="021gx5qzrc7jbgpp91mn36czr7fsh37wf3c7cifcv3xwzc54j4dd"; depends=[htmlwidgets qtl]; }; - qtlhot = derive2 { name="qtlhot"; version="0.9.0"; sha256="1043rksqqzgmr7q03j18wxgm706prqxq9ki9b9p2dxvc62vfcfih"; depends=[corpcor lattice mnormt qtl]; }; + qtlhot = derive2 { name="qtlhot"; version="1.0.4"; sha256="0gf0fsq91g830vqg5kz01zznm40qpjncy964ccvmms3i6d3hxd9m"; depends=[corpcor mnormt qtl]; }; qtlmt = derive2 { name="qtlmt"; version="0.1-6"; sha256="023h60z8d05832l2g7mg776hfjb0i7xpvhz3i899rc3h5pgjd94c"; depends=[]; }; - qtlnet = derive2 { name="qtlnet"; version="1.3.6"; sha256="044a2p3mpp203kb85s2fr3qiyypm461lrzxkfi0hnzq44qqba169"; depends=[graph igraph pcalg qtl sem]; }; + qtlnet = derive2 { name="qtlnet"; version="1.4.4"; sha256="1r9r6wp71i36ffcdxiljvh2c8nva868x2dx6bkinbaq8cixww2cx"; depends=[graph igraph pcalg qtl sem]; }; qtpaint = derive2 { name="qtpaint"; version="0.9.1"; sha256="08x7qcxwkaclwv1p4s9a5k95x35hzp69whiihkakjv5blm83m3g9"; depends=[qtbase]; }; quad = derive2 { name="quad"; version="1.0"; sha256="0fak12l19f260k0ygh6zimx8dabzsv7a9i2njw8hnfcs3ndffhv5"; depends=[PearsonDS]; }; quadmesh = derive2 { name="quadmesh"; version="0.1.0"; sha256="1k1midhszmi843krv9sdwbyhjmffgps0xx9aigkp7yw7mpif07vx"; depends=[dplyr raster]; }; @@ -9759,10 +9954,10 @@ in with self; { qualvar = derive2 { name="qualvar"; version="0.2.0"; sha256="1c7b7lcyq2l46sslk185r6xfh5fb35z9qihrhnh294sw1k52bffa"; depends=[]; }; quantable = derive2 { name="quantable"; version="0.2.2"; sha256="179bqqrga8mpigchfmhf11sc75frhd9nd6yqclz85lnd6gl16yd7"; depends=[caret e1071 gplots Matrix pROC RColorBrewer scales]; }; quantchem = derive2 { name="quantchem"; version="0.13"; sha256="1ga5xa7lsk04flfp1syjzpnvj3i2ypzh1m49vq1xkdwpm6axdy8n"; depends=[MASS outliers]; }; - quanteda = derive2 { name="quanteda"; version="1.1.1"; sha256="1yi59lr968y6l7v537xc6p50yi9y7hgyg5lwghqqgk13glg6zmbg"; depends=[data_table extrafont fastmatch ggplot2 ggrepel lubridate magrittr Matrix network Rcpp RcppArmadillo RcppParallel RSpectra sna SnowballC spacyr stopwords stringi XML yaml]; }; + quanteda = derive2 { name="quanteda"; version="1.2.0"; sha256="19rr0dkcazdkyzyy7srawf57mmvjjz3nvxik0bkqx6cl7cvrjajz"; depends=[data_table extrafont fastmatch ggplot2 ggrepel lubridate magrittr Matrix network Rcpp RcppArmadillo RcppParallel RSpectra sna SnowballC spacyr stopwords stringi XML yaml]; }; quantification = derive2 { name="quantification"; version="0.2.0"; sha256="116cp88q9cmizxc2a8lsysa1vwyp1y86457fx5qkq5dcm4g721g8"; depends=[car]; }; quantileDA = derive2 { name="quantileDA"; version="1.1"; sha256="0jbklxsy33j7clcw97qq4ijwkrb94v2m11gjcfa38vplfxm9913q"; depends=[]; }; - quantmod = derive2 { name="quantmod"; version="0.4-12"; sha256="0y7gh0k1s10vdsfch8777avbhf99mc9crikvx7ahqrw0j631vmhq"; depends=[curl TTR xts zoo]; }; + quantmod = derive2 { name="quantmod"; version="0.4-13"; sha256="16aldg96z7amp5mr90nb8127yy04gxsihfr26km5p3cx3j117yv0"; depends=[curl TTR xts zoo]; }; quantoptr = derive2 { name="quantoptr"; version="0.1.3"; sha256="0f9vy9yhya4wpya8n345s6n7a5sb29chdkl5fz6dwa31lp1mvvj3"; depends=[quantreg Rdpack rgenoud stringr]; }; quantreg = derive2 { name="quantreg"; version="5.35"; sha256="18f3qxv1j1bqmq55hzssz8mnp5ww4flhy80rm2v1rk0mmg9paz7m"; depends=[Matrix MatrixModels SparseM]; }; quantreg_nonpar = derive2 { name="quantreg.nonpar"; version="1.0"; sha256="1f9120awnkwsgdiqg98lg7xs5l4y80930869x6k9q76595r5m92k"; depends=[fda mnormt quantreg Rearrangement]; }; @@ -9785,10 +9980,10 @@ in with self; { quint = derive2 { name="quint"; version="1.2.1"; sha256="1d9dnrjnl9cg2yn5snr6x9qr6lf74639j3ymsxpw0wn5c4fm8z46"; depends=[Formula partykit rpart]; }; quipu = derive2 { name="quipu"; version="1.9.0"; sha256="1py1qpbwp2smr5di8b3zmzxxhchfmr5qfhqkdiqig28mcnqcmp5n"; depends=[agricolae pixmap shiny stringr xtable]; }; quokar = derive2 { name="quokar"; version="0.1.0"; sha256="1qnl3x1aa665xpyb3ac07xrnnjdwbmj645p103144k5is5b8likc"; depends=[ald ALDqr bayesQR dplyr ggplot2 GIGrvg gridExtra knitr magrittr MCMCpack purrr quantreg robustbase tidyr]; }; - quotedargs = derive2 { name="quotedargs"; version="0.1.1"; sha256="05y3jgix3aix3d4nazd7h9c27mfcl52xl6fdpfpi7zyd4iznpv9g"; depends=[]; }; + quotedargs = derive2 { name="quotedargs"; version="0.1.2"; sha256="034fhfmfq62yf7akx2i0bim70jq9azkk2h28k79lwax7ysydsjnj"; depends=[]; }; qut = derive2 { name="qut"; version="2.0"; sha256="1r0yg99p88ar1d9qhayzpplssjpsy901b7n6yr7r4n9nldh8p7xz"; depends=[flare glmnet lars Matrix]; }; qvcalc = derive2 { name="qvcalc"; version="0.9-1"; sha256="1ll71yww8rsbp0qa60w7vdna8yk60cq66cjn5cdk3bkdwyni28yy"; depends=[]; }; - qwraps2 = derive2 { name="qwraps2"; version="0.2.4"; sha256="18ail1y3kpiiwgkf7zn1acfz1ipz7wbk8pcmlganayr8p9yv7sh2"; depends=[dplyr ggplot2 knitr Rcpp tidyr]; }; + qwraps2 = derive2 { name="qwraps2"; version="0.3.0"; sha256="0xhlb0c955raxrqw202f7jd9c1wkrigh1qs93m2739jkwkyv2n3b"; depends=[devtools dplyr ggplot2 knitr magrittr Rcpp RcppArmadillo rlang tidyr]; }; r_jive = derive2 { name="r.jive"; version="2.1"; sha256="0l0bhhp6bdc84pzxi7gnsxx3scycw0zahrnc496wx3j43np9hlsg"; depends=[abind gplots SpatioTemporal]; }; r2d2 = derive2 { name="r2d2"; version="1.0-0"; sha256="1zl0b36kx49ymfks8rm33hh0z460y3cz6189zqaf0kblg3a32nsi"; depends=[KernSmooth MASS sp]; }; r2dRue = derive2 { name="r2dRue"; version="1.0.4"; sha256="1apdq7zj5fhs349wm9g6y06nn33x24pg3gdp4z1frd18qlacf8z5"; depends=[matrixStats rgdal sp]; }; @@ -9816,14 +10011,14 @@ in with self; { rDotNet = derive2 { name="rDotNet"; version="0.9.1"; sha256="18cd5373pdfi1x958llb4cgjqdi1fb7h7m5nkdwcd4xw9hxhinzd"; depends=[Rcpp testthat]; }; rEDM = derive2 { name="rEDM"; version="0.6.9"; sha256="0825yh82vlkmjkrwbk7xfhdq4c7yq7n4bmmw6x7ywmhbnayqj6b3"; depends=[Rcpp RcppEigen]; }; rEMM = derive2 { name="rEMM"; version="1.0-11"; sha256="0ynjn10gcmxs8qnh6idb34ppmki91l8sl720x70xkzcqpahy0nic"; depends=[cluster clusterGeneration igraph MASS proxy]; }; - rENA = derive2 { name="rENA"; version="0.1.3"; sha256="03sb6fb6d41nf4qd7ifsbr3gqgdk9g5lvjcxvdqhldxrhwn4b1ji"; depends=[data_table data_tree doParallel foreach magrittr plotly R6 Rcpp RcppArmadillo RcppEigen RcppParallel RcppRoll scales]; }; + rENA = derive2 { name="rENA"; version="0.1.4"; sha256="007kgb5n30c4jpbp7q2f0yj5mplb8pvhs8pvghy8zbwrl61n4kx5"; depends=[data_table data_tree doParallel foreach magrittr plotly R6 Rcpp RcppArmadillo RcppEigen RcppParallel RcppRoll scales]; }; rFDSN = derive2 { name="rFDSN"; version="0.0.0"; sha256="1ffiqpdzy4ipy2aci22zkih4373ifkjkpvsrza8awhyf9fwqwdsl"; depends=[XML]; }; rFSA = derive2 { name="rFSA"; version="0.9.1"; sha256="14qpxmzy4vy1fydn8yqh1001mqrgv1i67ai42w61dkk0d4m75z60"; depends=[hashmap tibble]; }; rFTRLProximal = derive2 { name="rFTRLProximal"; version="1.0.0"; sha256="1458gqy2zbaa62vaimawdr1nk0lsgwz1j4pgw21fkw7bskcszz0f"; depends=[data_table FeatureHashing foreach magrittr Matrix Rcpp RcppArmadillo RcppProgress]; }; rFerns = derive2 { name="rFerns"; version="2.0.3"; sha256="02lq43mgcz8n21hwb0pjqi0aq5dacnaakpx336q1xzw1kwlvfkhv"; depends=[]; }; rGammaGamma = derive2 { name="rGammaGamma"; version="1.0.12"; sha256="1051ah6q11qkxj1my4xybbzc8xcqkxfmps8mv2his5cyfllwidbs"; depends=[gsl]; }; rGoodData = derive2 { name="rGoodData"; version="0.1.1"; sha256="092sgy6y3dkyr32hrir4jvjwh7n6gfvv9z7i631fipg59255g0zy"; depends=[data_table httr jsonlite]; }; - rGroovy = derive2 { name="rGroovy"; version="1.2"; sha256="0wx17d4c7202dbmgw4nvnvw42fiwlzsl151idrmm4fzfff8y1vdi"; depends=[rJava]; }; + rGroovy = derive2 { name="rGroovy"; version="1.3"; sha256="172vm4diygzi4ipmw8bl03k0x3aps0h1vkvwvw539kamy7xb5w98"; depends=[rJava]; }; rHealthDataGov = derive2 { name="rHealthDataGov"; version="1.0.1"; sha256="0lkjprss15yl6n9wgh79r4clip3jndly2ab1lv4iijzxnxay099d"; depends=[bit64 httr jsonlite]; }; rHpcc = derive2 { name="rHpcc"; version="1.0"; sha256="0096z90mmf1j2xpb9034a5ph52m8z6n6xjh3km2vrhw63g3cpwap"; depends=[RCurl XML]; }; rIsing = derive2 { name="rIsing"; version="0.1.0"; sha256="1208lwfk9j8gghj8xf6i8v6s18h89ydqsd4jq3r88n403yzbzzck"; depends=[data_table Rcpp RcppEigen]; }; @@ -9833,9 +10028,10 @@ in with self; { rKIN = derive2 { name="rKIN"; version="0.1"; sha256="1j6fdi5h869q4d1hq6ha6qyhisa0zk2qmhjrc4ahl9991d680dyn"; depends=[ggplot2 maptools MASS rgeos sp]; }; rLDCP = derive2 { name="rLDCP"; version="1.0.2"; sha256="0k7zc1xyqmcl7070hhpqw1d2k1ij6bd4wjym8cw263pds2n7nx21"; depends=[XML]; }; rLTP = derive2 { name="rLTP"; version="0.1.4"; sha256="04w432m03xwh0szshsrfw5h7wy43q4lj8z0y07k8w6gsf27cy5bx"; depends=[RCurl]; }; - rLakeAnalyzer = derive2 { name="rLakeAnalyzer"; version="1.11.0"; sha256="0y6ir41yl8xj19lbwlvzcrfcrdk9cn9i4q4z1pg7mwj4cq6bc6gd"; depends=[plyr]; }; + rLakeAnalyzer = derive2 { name="rLakeAnalyzer"; version="1.11.4"; sha256="1fvln3r2zkzhsck53jppchg795qbjbzw0rd688h89if1lkiy51w6"; depends=[plyr]; }; rLiDAR = derive2 { name="rLiDAR"; version="0.1.1"; sha256="1w0yi4ygw0l9ydbllqjylp30d401bsf7b6fng6qg3pssbi9v3kln"; depends=[bitops deldir geometry plyr raster rgl sp spatstat]; }; rLindo = derive2 { name="rLindo"; version="8.0.1"; sha256="05qyc4wvpjgw8jxmwn2nwybi695fjn0cdilkprwmjg07c82f0q5n"; depends=[]; }; + rMEA = derive2 { name="rMEA"; version="1.0.0"; sha256="1cxcf2ji2f3kkjlj6lym7zfpmgbbjw7al67dldy2kn9dk2dn087z"; depends=[]; }; rMR = derive2 { name="rMR"; version="1.1.0"; sha256="0da1hclfnnlkp9by6zf2p079643p8nimplr9p3ipbjdy739j344z"; depends=[biglm]; }; rMouse = derive2 { name="rMouse"; version="0.1"; sha256="0pzxasap5kwxqq36mb4zi139jllsl4vk06dw2pv9xnwdxiszr3gp"; depends=[rJava]; }; rNMF = derive2 { name="rNMF"; version="0.5.0"; sha256="1nz6h0j5ywdh48m0swmhp34hbkycd7n13rclrxaw85qi9wc42597"; depends=[knitr nnls]; }; @@ -9869,6 +10065,7 @@ in with self; { radiant_design = derive2 { name="radiant.design"; version="0.8.0"; sha256="0n2a0jpjcxxmmr9sbky7v2cnzil3hv6b20yzkyc9lf4a48pqlm4l"; depends=[AlgDesign dplyr mvtnorm polycor r_import radiant_data shiny]; }; radiant_model = derive2 { name="radiant.model"; version="0.8.0"; sha256="0zlb5ny3s15d1ngdhszkn5wzij4y5fz7c2lwkb9g619pr0ngrwr8"; depends=[car data_tree DiagrammeR dplyr e1071 ggplot2 gridExtra lubridate magrittr NeuralNetTools nnet pryr psych r_import radiant_basics radiant_data rpart sandwich shiny stringr tidyr yaml]; }; radiant_multivariate = derive2 { name="radiant.multivariate"; version="0.8.0"; sha256="0l3rk5045apjb2jx04jf3mwjixg8cjwrgmz83km9627n93cabs2l"; depends=[car dplyr ggplot2 Gmedian GPArotation gridExtra magrittr MASS pryr psych r_import radiant_data radiant_model scales shiny wordcloud]; }; + radiomics = derive2 { name="radiomics"; version="0.1.3"; sha256="1ra94yaqw88slznhyv70kbfricxi44m4pnx1zh4ijghm491rphr5"; depends=[Rcpp reshape2 spatstat]; }; radir = derive2 { name="radir"; version="1.0.2"; sha256="09lcq8ax5x5yk3sqx15rvw3vyi8fyfzgs76kxjhf7hcw4qnib46d"; depends=[hermite]; }; radmixture = derive2 { name="radmixture"; version="0.0.1"; sha256="0rs60xjd43lg5c9972qhpg6bsqfg2578qvrz7gz3bdip10jb1ryj"; depends=[magrittr MCMCpack plyr quadprog]; }; rafalib = derive2 { name="rafalib"; version="1.0.0"; sha256="1dmxjl66bfdgrybhwyaa8d4i460liqcdw8b29a6w7shgksh29m0k"; depends=[RColorBrewer]; }; @@ -9884,7 +10081,7 @@ in with self; { ramcmc = derive2 { name="ramcmc"; version="0.1.0"; sha256="0s5jgjqkschr64srblppv9lbvhynlpfiy8cy12fywpmnbv8viazq"; depends=[Rcpp RcppArmadillo]; }; ramidst = derive2 { name="ramidst"; version="0.1.0"; sha256="1q4lvq2c2vj9xrm2p2w2qjsl4qvwcl6y54y68mmbd6cw7wqpffjj"; depends=[rJava]; }; ramify = derive2 { name="ramify"; version="0.3.3"; sha256="0cxmkxhshg0vrcxai2gbm4iih04f44liv5nh5jiq85hjz8qbhdi2"; depends=[]; }; - ramps = derive2 { name="ramps"; version="0.6-14"; sha256="09chbqh13h8b10dlcka07y954ga129lamg0fr38iwj4lqb6a2fvy"; depends=[coda fields maps Matrix nlme]; }; + ramps = derive2 { name="ramps"; version="0.6-15"; sha256="0c7y64z0ysjy0kh234xfqhbwwn1vgscvp1n4l2fjk5s5xz8633pn"; depends=[coda fields maps Matrix nlme]; }; ramsvm = derive2 { name="ramsvm"; version="2.0"; sha256="1q6ag3x1mgkyw8nsxghhk9yrcr0ybwilsx1yzg98bqsmxrrqk17q"; depends=[doParallel foreach]; }; randNames = derive2 { name="randNames"; version="0.2.3"; sha256="0vhzg14yg4c9inzxin8prfzh6nhf8fvbi4hbn122fyqyp5d6f8zi"; depends=[httr jsonlite tibble]; }; randaes = derive2 { name="randaes"; version="0.3"; sha256="14803argy0xdd8mpn4v67gbp90qi2is4x6na9zw7i9pm504xji1x"; depends=[]; }; @@ -9892,8 +10089,7 @@ in with self; { randnet = derive2 { name="randnet"; version="0.1"; sha256="1mpz3dsbzd5hffv2v5p6jdp0z07f7rhgcjinr1lwggvxw37xwrkj"; depends=[AUC entropy irlba Matrix poweRlaw RSpectra]; }; random = derive2 { name="random"; version="0.2.6"; sha256="0sdhagwjlhldb8hn6h4nd1sflzhwkapzybdlb8hzisy3w2ygjn9b"; depends=[curl]; }; random_polychor_pa = derive2 { name="random.polychor.pa"; version="1.1.4-2"; sha256="1ybwfn3hdwisxjn85vqrib1zhk8dcddbarbwjdf1vn27ih3c4h2c"; depends=[boot MASS mvtnorm nFactors psych sfsmisc]; }; - randomForest = derive2 { name="randomForest"; version="4.6-12"; sha256="1i43idaihhl6nwqw42v9dqpl6f8z3ykcn2in32lh2755i27jylbf"; depends=[]; }; - randomForest_ddR = derive2 { name="randomForest.ddR"; version="0.1.2"; sha256="1fijnzzap8my4l211m5pgj4fwna04z1db5m3hhim72i3xzc77hy2"; depends=[ddR Matrix randomForest]; }; + randomForest = derive2 { name="randomForest"; version="4.6-14"; sha256="0kbmm0l42fc2d1rdq0l7k09d34kd87q4lx651ffsic4y84h8kf7l"; depends=[]; }; randomForestExplainer = derive2 { name="randomForestExplainer"; version="0.9"; sha256="0gqqm3784krl6xdx7j6xvvyi2rjbyi6c8shm44yvq59is5i7fypc"; depends=[data_table dplyr DT dtplyr GGally ggplot2 ggrepel MASS randomForest reshape2 rmarkdown]; }; randomForestSRC = derive2 { name="randomForestSRC"; version="2.5.1"; sha256="1p5a5z7ddhnsrln8vpdrwvxbgknwdigczjw8vpxzbkckmf6qfidd"; depends=[]; }; randomGLM = derive2 { name="randomGLM"; version="1.02-1"; sha256="031338zxy6vqak8ibl2as0l37pa6qndln0g3i9gi4s6cvbdw3xrv"; depends=[doParallel foreach MASS]; }; @@ -9904,7 +10100,7 @@ in with self; { randomizationInference = derive2 { name="randomizationInference"; version="1.0.3"; sha256="0x36r9bjmpx90fz47cha4hbas4b31mpnbd8ziw2wld4580jkd6mk"; depends=[matrixStats permute]; }; randomizeBE = derive2 { name="randomizeBE"; version="0.3-3"; sha256="0vdvgk2b1h1lsj0ka01lwldfxanngir91axc8ywa6pg12hrdkkb0"; depends=[]; }; randomizeR = derive2 { name="randomizeR"; version="1.4"; sha256="0l7gvpm52fwbz79vgy7vn4z2n4gqigimdj6r9drm3lfzbylmx3js"; depends=[ggplot2 plotrix]; }; - randomizr = derive2 { name="randomizr"; version="0.8.0"; sha256="0yrjw3q8ivimbir6m3adw22mwq2ka0vpyrsrkvvn05bm5x5mffvs"; depends=[]; }; + randomizr = derive2 { name="randomizr"; version="0.12.0"; sha256="0g0n63srydljvj4spjl5r08khq0sqlhsj01s150m31cxf23zdjli"; depends=[]; }; randstr = derive2 { name="randstr"; version="0.2.0"; sha256="17593lbk6r089yasafd21i3v90ya9n92rflpzl0qicd2kqqk2gdh"; depends=[random stringi truncnorm]; }; randtests = derive2 { name="randtests"; version="1.0"; sha256="03z3kxl4x0l91dsv65ld9kgc58z82ld1f4lk18i18dpvwcgkqk82"; depends=[]; }; randtoolbox = derive2 { name="randtoolbox"; version="1.17.1"; sha256="13akf13qi4yhj9gapym05074b1qzk03vgysy81qsd73pd8r107ls"; depends=[rngWELL]; }; @@ -9913,24 +10109,26 @@ in with self; { rangemodelR = derive2 { name="rangemodelR"; version="1.0.1"; sha256="04zv8a4nhin9masvbw1cmbwdkls4wgq81xfw6kg0wdh1hpqjz1z0"; depends=[]; }; ranger = derive2 { name="ranger"; version="0.9.0"; sha256="1pilj5pxl8jl0gsy9vsyqxqdqfcxzvphbgvrlp4hf7r9mrfw9v0p"; depends=[Matrix Rcpp RcppEigen]; }; rankFD = derive2 { name="rankFD"; version="0.0.1"; sha256="1zb9gxvsmv46mpw5znskhfjxnwkr59hdixcly6i3r78yaqgca0dz"; depends=[coin lattice MASS Matrix]; }; - rankdist = derive2 { name="rankdist"; version="1.1.2"; sha256="1nr9nr5nfziia6jykk598hm5ngkfr6yx5mypq34iyfm24877gd3q"; depends=[hash optimx permute Rcpp]; }; + rankdist = derive2 { name="rankdist"; version="1.1.3"; sha256="1hdafy2zzn7hwl1lx5jksgi974zjn49dwih5s2zdyv4nnmmai003"; depends=[hash optimx permute Rcpp]; }; rankhazard = derive2 { name="rankhazard"; version="1.1.0"; sha256="0kljn9b74alrd22b5pwfnamdbaqi2wa2z6yzpmgpfs3x0hv72fw7"; depends=[survival]; }; rapiclient = derive2 { name="rapiclient"; version="0.1.2"; sha256="072rlr7z9rj4agkzmy12cz4axh4pajavfd83lpcx2b1lgxpj6ck4"; depends=[httr jsonlite]; }; + rapidjsonr = derive2 { name="rapidjsonr"; version="1.0.0"; sha256="064xqvyv83vl188rk18kgi4iaqq299d2y6fr24dk9lndpc4509kc"; depends=[]; }; rapidraker = derive2 { name="rapidraker"; version="0.1.0"; sha256="17jzkzm5hvd8vcqql40bwl89sfgz8yicvi0753nzgkmbvanzjhjx"; depends=[openNLPdata rJava slowraker]; }; rappdirs = derive2 { name="rappdirs"; version="0.3.1"; sha256="0ji6sg3bdn5gazkq14xmmcq7jnbsyxw4lzmmbgv6526j2vn93n1g"; depends=[]; }; rapport = derive2 { name="rapport"; version="1.0"; sha256="1i1zawar5yxw23km74mrvaxnc9hr06kqjvbm046c09cqi6pw0hjh"; depends=[pander rapportools stringr yaml]; }; rapportools = derive2 { name="rapportools"; version="1.0"; sha256="1sgv4sc737i12arh5dc3263kjsz3dzg06qihfmrqyax94mv2d01b"; depends=[pander plyr reshape]; }; raptr = derive2 { name="raptr"; version="0.1.1"; sha256="17k392vid1is0wl5iyr8b41xyw5y0ad7drvlmrcsda7683yal3p3"; depends=[adehabitatHR assertthat BH boot doParallel gdalUtils ggplot2 hypervolume ks Matrix mvtnorm PBSmapping plyr RandomFields raster RColorBrewer Rcpp RcppEigen rgdal rgeos RgoogleMaps scales shape sp]; }; + rare = derive2 { name="rare"; version="0.1.0"; sha256="05bnh2m1sah6zvzvmm3bq1i2n5kmhhxnlzbrjxzmb9vj6skaglv1"; depends=[glmnet Matrix Rcpp RcppArmadillo]; }; rareGE = derive2 { name="rareGE"; version="0.1"; sha256="0v3a2wns77q923ilddicqzg0108f8kmfdnsff1n65icin7cfzsny"; depends=[MASS nlme survey]; }; rareNMtests = derive2 { name="rareNMtests"; version="1.1"; sha256="13r2hipqsf8z9k48ha5bh53n3plw1whb7crpy8zqqkcac8444b2z"; depends=[vegan]; }; - rarhsmm = derive2 { name="rarhsmm"; version="1.0.5"; sha256="0h5njhvpl2msb2wbb80bmlzzci0ma10rx5y5hxa4vdxgj23g6rpm"; depends=[glmnet Rcpp RcppArmadillo]; }; + rarhsmm = derive2 { name="rarhsmm"; version="1.0.7"; sha256="0pvqa6f0ib1jb0rwc6wv6hfinncb21v2g0y0hsy5l33gdagjw2sz"; depends=[glmnet Rcpp RcppArmadillo]; }; rasclass = derive2 { name="rasclass"; version="0.2.2"; sha256="1lsmv8kh519mz3szb4k9s17fz1480cw0i4qk12givhhm2rpzjy50"; depends=[car e1071 nnet randomForest RSNNS]; }; rase = derive2 { name="rase"; version="0.3-3"; sha256="03jqf5y5vj354m9psp81wzw6d7dfqr76bfjqv9kannsakkj587sy"; depends=[ape mvtnorm polyCub rgl sm spatstat]; }; raster = derive2 { name="raster"; version="2.6-7"; sha256="009bwil3n9gaf11wzifwxyw9j6pl0pyjk3l5v7csd935si7q14gv"; depends=[Rcpp sp]; }; rasterImage = derive2 { name="rasterImage"; version="0.3.0"; sha256="0csx7wqwxdsddypd1c9wv74gcyymasn9n6pn05a35j6xhqbk2zp3"; depends=[plotrix]; }; rasterKernelEstimates = derive2 { name="rasterKernelEstimates"; version="1.0.1"; sha256="1733ic1hxym3gyibk2ysy5zzq7s9rbf6jx63x7irnrcavq151f8s"; depends=[raster]; }; rasterList = derive2 { name="rasterList"; version="0.5.8"; sha256="0q7apglxzpah04463z07cpkzyd6l6dbbdhm601brzh6yk75z20vh"; depends=[raster]; }; - rasterVis = derive2 { name="rasterVis"; version="0.43"; sha256="0g6ij4h5di4c0pzv7ghc63jfl3j3rm1g541apbjr6n4k9ci12k4l"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp viridisLite zoo]; }; + rasterVis = derive2 { name="rasterVis"; version="0.44"; sha256="041a3d6vcvsah6qm4mf2nc70sln9djlv2ymq389icagiwdqjw9xh"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp viridisLite zoo]; }; ratelimitr = derive2 { name="ratelimitr"; version="0.3.9"; sha256="0w6i9czcbj8ipd9nn4w4h4pqk6xd8anh00cn60hss9hs18fcb21d"; depends=[assertthat]; }; rateratio_test = derive2 { name="rateratio.test"; version="1.0-2"; sha256="1a2v12z2dr893ha80fhada1820z5ih53w4pnsss9r9xw3hi0m6k5"; depends=[]; }; raters = derive2 { name="raters"; version="2.0.1"; sha256="16jnx6vv39k4niqkdlj4yhqx8qbrdi99bwzxjahsxr12ab5npbp1"; depends=[]; }; @@ -9940,7 +10138,7 @@ in with self; { rattle = derive2 { name="rattle"; version="5.1.0"; sha256="0xxf2wpazsk29y2byyk010n59vmzmhm4phpsqvklmsr1v3m10pvp"; depends=[cairoDevice dplyr ggplot2 magrittr RGtk2 rpart_plot stringi stringr tidyr XML]; }; rattle_data = derive2 { name="rattle.data"; version="1.0.2"; sha256="0cnmyzvy23jc4vz521c3jg0w4165waycvy5014l5773fy19zq75c"; depends=[]; }; raw = derive2 { name="raw"; version="0.1.5"; sha256="0w0k35izvsi8vwp38har4ygh1zxnz7hfla8d8fcbvckpfbkwpggp"; depends=[]; }; - rbacon = derive2 { name="rbacon"; version="2.3.3"; sha256="0kkj4ylvk7gsbzzqdg8b66kp4mn99k8yzmgml7z0nkll0lr54srk"; depends=[coda Rcpp]; }; + rbacon = derive2 { name="rbacon"; version="2.3.4"; sha256="1va1rap2n6mcjfzclqg5h58ggrs2kb4nlaam5ch984w9rzq59g2l"; depends=[coda Rcpp]; }; rbamtools = derive2 { name="rbamtools"; version="2.16.6"; sha256="1sb18qx68fnj1d598lw8fkqnxp3c5s704g6cnhwy299gppj3xg1d"; depends=[refGenome]; }; rbcb = derive2 { name="rbcb"; version="0.1.3"; sha256="0bghbxrgy4lpxyazqlm90i42dav1kjca02l2nmw320v01rvw5qvd"; depends=[httr jsonlite tibble xml2 xts]; }; rbefdata = derive2 { name="rbefdata"; version="0.3.5"; sha256="12mcqz0pqgwfw5fmma0gwddj4zk0hpwmrsb74dvzqvgcvpfjnv98"; depends=[RColorBrewer RCurl rjson rtematres wordcloud XML]; }; @@ -9949,17 +10147,18 @@ in with self; { rbhl = derive2 { name="rbhl"; version="0.8.0"; sha256="1avx36as99za19acjh7adb72ckdn69rmiwzcrrqxskzny56vxf0d"; depends=[crul jsonlite plyr tibble xml2]; }; rbi = derive2 { name="rbi"; version="0.9.0"; sha256="0am6r8dy3nfahprkyvap73x3b6vxgc604v7mf9wbb9vwjja00xzp"; depends=[data_table ncdf4 reshape2]; }; rbiouml = derive2 { name="rbiouml"; version="1.8"; sha256="0qvc896sf6idczbxix3klf56paxf0wpfbmga8qqlcyjasv1dsdql"; depends=[RCurl RJSONIO]; }; - rbison = derive2 { name="rbison"; version="0.5.4"; sha256="0l3653q7bfda9lw1isnx6gdd7l5b8aldqgc2hppg2wh2k004rnf6"; depends=[crul dplyr ggplot2 jsonlite mapproj plyr sp]; }; + rbison = derive2 { name="rbison"; version="0.6.0"; sha256="09mbhk56ns1qldgcj8qard3dsvsfbnlrq4s4drc46lr1s8lqjd1h"; depends=[crul dplyr ggplot2 jsonlite mapproj plyr sp]; }; rbitcoinchartsapi = derive2 { name="rbitcoinchartsapi"; version="1.0.4"; sha256="0r272jvjh3rzch8dmn4s0a5n5k6dsir7pr4qswzfvafqjdiwjajz"; depends=[RCurl RJSONIO]; }; rbmn = derive2 { name="rbmn"; version="0.9-2"; sha256="1zy832y399cmfmhpyfh7vfd293fylf1ylmp8w8krkmzkmyfa80f2"; depends=[MASS]; }; rbokeh = derive2 { name="rbokeh"; version="0.5.0"; sha256="1lpbph6bhh9rf5rs0ivp8dchx8i8ylz5nr7xc2xv9bnwlwj35729"; depends=[digest ggplot2 gistr hexbin htmlwidgets jsonlite lazyeval magrittr maps pryr scales]; }; rbounds = derive2 { name="rbounds"; version="2.1"; sha256="1h334bc37r1vbwz1b08jazsdrf6qgzpzkil9axnq5q04jf4rixs3"; depends=[Matching]; }; + rbraries = derive2 { name="rbraries"; version="0.1.0"; sha256="12vdci4rzjvd419nxh99hpkhjlx86nsmrbjca0am5q0rkc68dgmj"; depends=[crul data_table fauxpas jsonlite tibble]; }; rbtt = derive2 { name="rbtt"; version="0.1.0"; sha256="1gbsb0vmqxcl28c5nn0rz95bxrvl7i0b17lq90cj5ahbk6x9jblz"; depends=[data_table]; }; rbugs = derive2 { name="rbugs"; version="0.5-9"; sha256="1kvn7x931gjpxymrz0bv50k69s1x1x9mv34vkz54sdkmi08rgb3y"; depends=[]; }; rbundler = derive2 { name="rbundler"; version="0.3.7"; sha256="0wmahn59h9vqm6bq1gwnf6mvfkyhqh6xvdc5hraszn1419asy26f"; depends=[devtools]; }; rbvs = derive2 { name="rbvs"; version="1.0.2"; sha256="1wzxz2ca8f1phhbqr9p7c8sk09cyrdq5jc45g4ddrqvi2q29k28y"; depends=[]; }; rcanvec = derive2 { name="rcanvec"; version="0.2.1"; sha256="0gsk2cfiysxjw2lrnpl2l524lvhh9nhnyyh79n8p7vykyqj711yn"; depends=[rgdal sp]; }; - rcarbon = derive2 { name="rcarbon"; version="1.0.0"; sha256="0xgf26m8cw3g4nc4s413xgplxv8a6s2m4m7g3zavsjl3517b86bc"; depends=[doParallel foreach sp]; }; + rcarbon = derive2 { name="rcarbon"; version="1.1.0"; sha256="0y201lrmdisw7rmzaxsyiwdj4kms7q1dvw34ial28989ci1rslrw"; depends=[doParallel foreach sp]; }; rcartocolor = derive2 { name="rcartocolor"; version="0.0.22"; sha256="1dh1n01v70sfmymg1w0f272j6nwnrzawqx5x4ljgh46pzqprx56r"; depends=[ggplot2 scales]; }; rcbalance = derive2 { name="rcbalance"; version="1.8.5"; sha256="15qlk3cqwsvixl17l1fxcajrabmz4y7q5gz0a1pd66f6i1xskcqq"; depends=[MASS plyr]; }; rcbsubset = derive2 { name="rcbsubset"; version="1.1.3"; sha256="16wd0j0z2ll8hqrk27fss4k9fyjw6xwx30xkrphx9jj2ws08wibl"; depends=[MASS plyr]; }; @@ -9972,17 +10171,19 @@ in with self; { rchallenge = derive2 { name="rchallenge"; version="1.3.0"; sha256="1qn2pzch5yk771jsjcsmfsi5vddfb2w50vfqlkmsl6nf5z6sdq9k"; depends=[knitr rmarkdown]; }; rchess = derive2 { name="rchess"; version="0.1"; sha256="0qnvvvwcl02rmqra9m7qnhy40cbavswbq6i0jm47x6njmr1gpfhy"; depends=[assertthat dplyr ggplot2 htmlwidgets plyr R6 V8]; }; rcicr = derive2 { name="rcicr"; version="0.3.4.1"; sha256="1sa13sbhx64cf8szr2811iq4a1asb8d3k0igxw6fbssij2lwbxzp"; depends=[aspace dplyr jpeg matlab scales]; }; - rclimateca = derive2 { name="rclimateca"; version="1.0.0"; sha256="1wydh7k7yyi56l3xdprzx4s7425k68a7f53hx9pvr0xmn501l67z"; depends=[digest dplyr hms httr lubridate magrittr mudata2 prettymapr purrr readr reshape2 rlang stringr tibble tidyr]; }; + rclimateca = derive2 { name="rclimateca"; version="1.0.1"; sha256="1mv4i290x0bwvap5njizal5z0ccbkqjfyk2pmcbx4sml5crhx6yy"; depends=[digest dplyr httr lubridate magrittr mudata2 prettymapr purrr readr reshape2 rlang stringr tibble tidyr]; }; rclipboard = derive2 { name="rclipboard"; version="0.1"; sha256="0qphr3qrp0k2gnzk27bgfiq3ff6b8564gmkrjw1kri1p7ilf71wx"; depends=[shiny]; }; rcmdcheck = derive2 { name="rcmdcheck"; version="1.2.1"; sha256="04gh0drvkikn91i5zmpixhrhyjnsyxwz8k8bx4kgwwrmh1dc7f2s"; depends=[callr clisymbols crayon digest withr]; }; - rcompanion = derive2 { name="rcompanion"; version="1.11.3"; sha256="1wzqqss86z2qggyjwpc41wblw9kkca20mbh6q4dwl4yc7gb4ggaf"; depends=[boot BSDA coin DescTools EMT hermite lattice lmtest multcompView nortest ordinal plyr RVAideMemoire WRS2]; }; + rcompanion = derive2 { name="rcompanion"; version="1.13.0"; sha256="1smkwp7xjkwiix1m7cx13hwnmka8nqv6m3s5wlzd02l9grc5ldrp"; depends=[boot BSDA coin DescTools EMT hermite lattice lmtest multcompView nortest ordinal plyr RVAideMemoire WRS2]; }; rcongresso = derive2 { name="rcongresso"; version="0.3.2"; sha256="15b7m1z5lr66kwhl8v8k2car4id9ssd0ypz75z259v8c1w0k7xkl"; depends=[dplyr httr jsonlite magrittr tibble tidyr]; }; rcoreoa = derive2 { name="rcoreoa"; version="0.1.0"; sha256="13nfziqxxljnczn3idq3zlc9xkklalfnxbakvhs5bw19jmbd11ba"; depends=[crul jsonlite pdftools]; }; rcorpora = derive2 { name="rcorpora"; version="1.2.0"; sha256="0nxd2arzz2617xxcngvcrrrsky9f1b9zdmpv81zr89y08b3xh9f1"; depends=[jsonlite]; }; + rcqp = derive2 { name="rcqp"; version="0.5"; sha256="0iww9pbfxlvr68csig9nfi48nrqn2j6viqwwwggk789bk6ffz00a"; depends=[plyr]; }; rcreds = derive2 { name="rcreds"; version="0.6.6"; sha256="1sdrdgn53kgcdnxfjs8jh0h538vb3b9ixz74lbnp54yp09jpqsri"; depends=[collectArgs digest jsonlite magrittr]; }; rcrossref = derive2 { name="rcrossref"; version="0.8.0"; sha256="01k3jpd6awan8r4kc5wjw0did30i2bafzjr8mwaaqv87gni2yiyf"; depends=[bibtex crul dplyr jsonlite miniUI plyr R6 shiny stringr xml2]; }; rcrypt = derive2 { name="rcrypt"; version="0.1.1"; sha256="002r5wr0bmqbj014iz8wacj883j6gqcxc786m6p9a7zdrjpx2pqi"; depends=[]; }; rcss = derive2 { name="rcss"; version="1.2"; sha256="08hiprjcjvc138laqrvlvrmn664b63x829ammzgrwjqcsj4kpmds"; depends=[Rcpp RcppArmadillo rflann]; }; + rcube = derive2 { name="rcube"; version="0.1"; sha256="15dyxwsj7f2annf3a2wi158m9s38jfl31lhwfi9shlzi5xadcwjk"; depends=[]; }; rcure = derive2 { name="rcure"; version="0.1.0"; sha256="1pcdc168bwn0b90xy8sdwrm2yvhj26xj11wm8z84m48sxy56j4v8"; depends=[arm MASS plyr smcure survival]; }; rcv = derive2 { name="rcv"; version="0.2.1"; sha256="0i5z3a918ykl56dv3dvzwwcv550gvjjdg5kfh63jlpaxn9ybmv3f"; depends=[dplyr readr stringr tibble tidyr]; }; rda = derive2 { name="rda"; version="1.0.2-2"; sha256="1g2q7c0y138i9r7jgjrlpqznvwpqsj6f7vljqqfzh2l6kcj43vjj"; depends=[]; }; @@ -9996,21 +10197,23 @@ in with self; { rdefra = derive2 { name="rdefra"; version="0.3.4"; sha256="05fskap0vvrq08m4gql9gczy04lc3dgxgjcsb57dgp3nng358sf6"; depends=[dplyr httr lubridate rgdal sp tibble xml2]; }; rdetools = derive2 { name="rdetools"; version="1.0"; sha256="0pkl990viv7ifr7ihgdcsww93sk2wlzp2cg931wywagfp8dijd02"; depends=[]; }; rdflib = derive2 { name="rdflib"; version="0.1.0"; sha256="1xq378nfvbk8b2nbnr6yswqr351pgli7jcmhcr1ipynkl93rl5qm"; depends=[jsonld readr redland stringi]; }; + rdfp = derive2 { name="rdfp"; version="0.1.2"; sha256="1kznr5p5mhplgpgmc0f4vrs1fwpivwjy52hwfc8k0q0vx53h3fs2"; depends=[curl dplyr httr lubridate plyr purrr readr XML xml2]; }; rdian = derive2 { name="rdian"; version="0.1.1"; sha256="0i4ljcqhmrwrqbhi321iffypxj4kndx47ssljnixr3fx2lmqh0q1"; depends=[curl httr]; }; rdist = derive2 { name="rdist"; version="0.0.2"; sha256="0rwv8brambwki3jzpq250lk0k7nmvlzm80szy4nkhdl2zxwriv0a"; depends=[Rcpp RcppArmadillo]; }; rdiversity = derive2 { name="rdiversity"; version="1.0"; sha256="0x6s9028v4xcc54yy4977yqw5mrsbqlrm5b9drj05c64mavhm4sq"; depends=[ape ggplot2 ggthemes phangorn phytools plyr reshape2 tibble tidyr]; }; - rdlocrand = derive2 { name="rdlocrand"; version="0.2"; sha256="1jad0b9qqlc88knd92yvjqklilbybp9zpkdq7jx1251m6hivs9sw"; depends=[AER sandwich]; }; + rdlocrand = derive2 { name="rdlocrand"; version="0.3"; sha256="1cv69iy5sx9kdplpk9hnriqzgrm5mjbmhax4cybszhsyaly6r78d"; depends=[AER sandwich]; }; rdnb = derive2 { name="rdnb"; version="0.1-1"; sha256="1mg40jad79mk95ndnljvfvyh9rhbxkw7inpg2vbsixf1ywdljri3"; depends=[brew httr xml2]; }; rdomains = derive2 { name="rdomains"; version="0.1.7"; sha256="1w6jvwzd9lwha4qkf8rhd1g3cpr79fsl4rrmh5chdnbahqg60gh9"; depends=[aws_alexa curl glmnet httr Matrix rlang RSelenium urltools virustotal XML xml2]; }; rdoxygen = derive2 { name="rdoxygen"; version="1.0.0"; sha256="16907969w66xvy62k45rw10qfv4x8z6jkkc6i97vppkgnlvf4d4b"; depends=[devtools]; }; rdpla = derive2 { name="rdpla"; version="0.2.0"; sha256="0d32bp68z1agymcmjwnds4fkblhjrcx8i2q6f5b7sl4kdfdbjchf"; depends=[crul data_table hoardr jsonlite tibble]; }; - rdrobust = derive2 { name="rdrobust"; version="0.99"; sha256="1c9issw0mssswln2mdirwjlaps4ps8q9z1wr4ailr4c2z9klla9p"; depends=[]; }; + rdpower = derive2 { name="rdpower"; version="0.1"; sha256="1pi0g980zgy0h3kyiksnbpi59fksm17g9lxinqjf7xiam7pgw99n"; depends=[rdrobust]; }; + rdrobust = derive2 { name="rdrobust"; version="0.99.1"; sha256="18hq4nmyf8327qdbh7m8y0av6f21pcxaxfqs0qrc07yf6sdcj6ri"; depends=[]; }; rdrop2 = derive2 { name="rdrop2"; version="0.8.1"; sha256="1f4ysck58dm40k4wn9nfjaxym0mbgfkm146iidfkz7agmd1x0xyl"; depends=[assertive digest dplyr httr jsonlite magrittr purrr]; }; rdryad = derive2 { name="rdryad"; version="0.3.0"; sha256="18vjq5amaian174ywymsx1px7ckirk36386h66lsq0h87qwnrwj7"; depends=[crul curl oai solrium xml2]; }; - rdwd = derive2 { name="rdwd"; version="0.9.0"; sha256="1zqmfrxjrkp0f8d943wlzvr7g0rrnbp3x9klx3syrbkn7jqxz49i"; depends=[berryFunctions pbapply]; }; + rdwd = derive2 { name="rdwd"; version="0.10.1"; sha256="0w1wd1qxisdqd04ybcacbjjsjsvhjd152jcfjljzv2d20ha82kcn"; depends=[berryFunctions pbapply]; }; re2r = derive2 { name="re2r"; version="0.2.0"; sha256="0xv355h4bps4a0picxmi6i15niq4knlail80fp9xvszyn72pm8gq"; depends=[htmlwidgets Rcpp RcppParallel stringi]; }; reGenotyper = derive2 { name="reGenotyper"; version="1.2.0"; sha256="13g4fhj25kdk6wbl1hcabcaxcpv0dj0hj2l502wl1aywk1fvmy8m"; depends=[gplots MatrixEQTL zoo]; }; - reReg = derive2 { name="reReg"; version="1.1-1"; sha256="1pjzh9r7488d39a5s0hkymzxh79zc1kp2ag2cp037v3j65mifbin"; depends=[aftgee BB ggplot2 MASS nleqslv plyr SQUAREM survival]; }; + reReg = derive2 { name="reReg"; version="1.1-2"; sha256="13xnxpsa5pk39sp6pq9qvj4m0pjhvidfbjsx1s9qdczrvm6zsl3c"; depends=[aftgee BB ggplot2 MASS nleqslv plyr SQUAREM survival]; }; reactR = derive2 { name="reactR"; version="0.2.0"; sha256="17jdcby95fxfa3imalllnqsp16py5vqqj4y0za4wli91vd37555q"; depends=[htmltools]; }; read_dbc = derive2 { name="read.dbc"; version="1.0.5"; sha256="1vrvxkcrk3iw5am9rsadxzf0wsr7z2mdpa5wb0v9jbhda710b4yf"; depends=[foreign]; }; readBrukerFlexData = derive2 { name="readBrukerFlexData"; version="1.8.5"; sha256="1qmimfxwh6d7s5qrnnk20i2f9l5j1ci3wpfs3qlmggz69jzf589m"; depends=[]; }; @@ -10024,15 +10227,17 @@ in with self; { readbitmap = derive2 { name="readbitmap"; version="0.1-4"; sha256="08fqqsdb2wsx415mnac9mzl5sr5and0zx72ablnlidqfxv8xsi9d"; depends=[bmp jpeg png]; }; readbulk = derive2 { name="readbulk"; version="1.1.0"; sha256="0m02isvja0ihvy1fscjdl5f9gfdlmfmabgvpirgd2m9j3lz6mi8s"; depends=[plyr]; }; reader = derive2 { name="reader"; version="1.0.6"; sha256="1x489q3ljap4zpny68mx83mgxaqiwlkglcy57whwhnh33dd7qp4h"; depends=[NCmisc]; }; + readit = derive2 { name="readit"; version="1.0.0"; sha256="1sq2spjgdc9rq8cr5i9qjmqd4vcf7cknpx5dndwjdqrv112y8bk9"; depends=[crayon haven jsonlite readr readxl]; }; readobj = derive2 { name="readobj"; version="0.3"; sha256="0hwxfk27azay8hjz702b10cg395is06wnypqdw4788gm25d0i041"; depends=[Rcpp]; }; readr = derive2 { name="readr"; version="1.1.1"; sha256="1cvw5wdcqk88cp5fyv678mnmp66l3whcd2yh33p2qvx0168bja8s"; depends=[BH hms R6 Rcpp tibble]; }; + readroper = derive2 { name="readroper"; version="0.9.0"; sha256="1ikw114gc71lg3snawz7bfpd2mk2m1181183sz0lsc5sgl67bb17"; depends=[readr]; }; readstata13 = derive2 { name="readstata13"; version="0.9.0"; sha256="06qx40v4n217wi379d08w7kc9wlbxlyz9jqcsc85099vgab7l993"; depends=[Rcpp]; }; readtext = derive2 { name="readtext"; version="0.50"; sha256="1il7zfm092vvns8manz8lkj34q1w4gw931agkpk83cvf1618l5nl"; depends=[antiword data_table httr jsonlite pdftools readODS readxl streamR stringi tibble XML]; }; readxl = derive2 { name="readxl"; version="1.0.0"; sha256="1bf7gxw9r11m4llyymplxiaa4gzgyj4bwmwad5in756pzq3jzmpv"; depends=[cellranger Rcpp tibble]; }; realestateDK = derive2 { name="realestateDK"; version="0.1.0"; sha256="02y3c2zww9jakh9a0jqxkgcwshjz1hd5mw63603hyic7q4a07iv3"; depends=[statsDK]; }; reams = derive2 { name="reams"; version="0.1"; sha256="07hqi0y59kv5lg0nl75xy8n48zw03y5m71zx58aiig94bf3yl95c"; depends=[leaps mgcv]; }; rebird = derive2 { name="rebird"; version="0.4.0"; sha256="1awwjr0gsd7hksh84fz5p17qwd857zn03fc2q0kzncy6q6iiw481"; depends=[dplyr httr jsonlite]; }; - rebmix = derive2 { name="rebmix"; version="2.10.0"; sha256="0n9s3xklrlzw6mb798q8p395506baj0pxp6n9lj9hhfibbgjif1c"; depends=[mvtnorm]; }; + rebmix = derive2 { name="rebmix"; version="2.10.1"; sha256="1ccdcmbcnlm0i3r6h09v85wdq4c8gz9dvvbfd2a5zx3ikwfm4wri"; depends=[mvtnorm]; }; rebus = derive2 { name="rebus"; version="0.1-3"; sha256="0ms3dm6g0fq3jycpgjl7q7kyljxc97cczy2jj0lyviwmipdgjg9d"; depends=[rebus_base rebus_datetimes rebus_numbers rebus_unicode]; }; rebus_base = derive2 { name="rebus.base"; version="0.0-3"; sha256="1n2khszcya9k6379bdkq47xi2nw9jngiwj7z8a14wfswqydczv6y"; depends=[]; }; rebus_datetimes = derive2 { name="rebus.datetimes"; version="0.0-1"; sha256="09lv41mywm13avxb0xp8x1a2xz50zxazh3lpg27m16d4cgijmhm5"; depends=[rebus_base]; }; @@ -10042,7 +10247,7 @@ in with self; { rechonest = derive2 { name="rechonest"; version="1.2"; sha256="0vpff8q5p6in7vjyl62bx3wmksravcg4mpx20qlgy5ia47vyhqp2"; depends=[httr jsonlite RCurl]; }; recipes = derive2 { name="recipes"; version="0.1.2"; sha256="1car3a3mqn87pz049cbgkaayz86970mvkapk6al2k7jjw76306l9"; depends=[broom ddalpha dimRed dplyr gower ipred lubridate magrittr Matrix purrr RcppRoll rlang tibble tidyselect timeDate]; }; recluster = derive2 { name="recluster"; version="2.8"; sha256="05g8k10813zbkgja6gvgscdsjd99q124jx31whncc4awdsgk69s4"; depends=[ape cluster phangorn phytools picante vegan]; }; - recmap = derive2 { name="recmap"; version="0.5.26"; sha256="02fvl275k4455yw5n31fxb2jhiaciki4i7zzzks166gz33rc0dwy"; depends=[GA Rcpp sp]; }; + recmap = derive2 { name="recmap"; version="0.5.31"; sha256="1kgmqmpphz4p2zidl0l24nia49g8211dyk66wl09azay4vxm46nj"; depends=[GA Rcpp sp]; }; recoder = derive2 { name="recoder"; version="0.1"; sha256="0wh0lqp7hfd4lx2xnmszv1m932ax87k810aqxdb6liwbmvwqnfgd"; depends=[stringr]; }; recombinator = derive2 { name="recombinator"; version="1.0.0"; sha256="0amcpicsk270l9h7qgv764wp09phsffdpi4adcxrsrwiwm274ibw"; depends=[crayon]; }; recommenderlab = derive2 { name="recommenderlab"; version="0.2-2"; sha256="13mgkxrcwh5ry699my3w6xgm6rabsk9fd5qqsdwzy7cfq6xkq7cg"; depends=[arules irlba Matrix proxy registry]; }; @@ -10051,7 +10256,7 @@ in with self; { reconstructr = derive2 { name="reconstructr"; version="2.0.0"; sha256="1pa6b8zns9495f1bdifvx19hsy5808hqbxb2bn1srwnr4s3ma1zi"; depends=[openssl Rcpp]; }; recosystem = derive2 { name="recosystem"; version="0.4.2"; sha256="1bn6l23gqmfpr6w60ph7zgv53vy3vnq9zdy5x0a8n1yp6b0lw48x"; depends=[Rcpp RcppProgress]; }; recurse = derive2 { name="recurse"; version="1.1.0"; sha256="1zgzzhbvdzqgmgzj43yvpyc7ahbkn96l5wyr1iqpnn3ha78fy0p3"; depends=[Rcpp]; }; - red = derive2 { name="red"; version="1.3.1"; sha256="1m8jk3k0g17dlqbws74wi1lsa11v26si2857sxgzv659f46ybmq3"; depends=[BAT dismo geosphere jsonlite maptools raster rgdal rgeos sp]; }; + red = derive2 { name="red"; version="1.3.3"; sha256="0f4lriwlsq65z0sqjv4csrkbcjjvpybqf68rgx92ypkdjf57ixrs"; depends=[BAT dismo geosphere jsonlite maptools raster rgdal rgeos sp]; }; redR = derive2 { name="redR"; version="1.0.0"; sha256="01safawd9ai34fqxjpc161yzpsk31hfyl8ybcfvdj7a9vdbvcb5i"; depends=[imager]; }; reda = derive2 { name="reda"; version="0.4.1"; sha256="0aq6c2h694kdmjis12g4nxq5hdlzsi42nbnpzq7wic305l5r7nxl"; depends=[ggplot2 Rcpp RcppArmadillo splines2]; }; redcapAPI = derive2 { name="redcapAPI"; version="2.0"; sha256="1n4kwmd0kgmnx2zcgvrz2dlkxmv6wflyj4pll00qvpb1njgnq1xv"; depends=[checkmate chron DBI httr labelVector lubridate stringr tidyr]; }; @@ -10109,7 +10314,7 @@ in with self; { relevent = derive2 { name="relevent"; version="1.0-4"; sha256="10bf1s7jmas8ck1izqibqcaqg4z55ciwdpd9pm2697y8z0jhr2rj"; depends=[coda sna trust]; }; reliaR = derive2 { name="reliaR"; version="0.01"; sha256="000nafjp386nzd0n57hshmjzippiha6s6c4nfrcwl059dzmi088i"; depends=[]; }; relimp = derive2 { name="relimp"; version="1.0-5"; sha256="0ydn82g8xdqzhf34187080bbpcpw1zdjbj2i3dv1d6d35vvprb5c"; depends=[]; }; - relsurv = derive2 { name="relsurv"; version="2.1-1"; sha256="0jdxjnrxygn3ppzsndyzcch19c726s15lrd0kc1vxbjp3b4r0lhl"; depends=[date survival]; }; + relsurv = derive2 { name="relsurv"; version="2.1-2"; sha256="0hcvp1n8cvcnpqhwi1gcj3krzsarsk73ivwi75bvsvr3dpgxnwrm"; depends=[date survival]; }; rem = derive2 { name="rem"; version="1.2.8"; sha256="1w0lkxjhyssl9343z6lw7dn0cazz9firglvcf74nls4ngkgv0bbd"; depends=[doParallel foreach Rcpp]; }; remMap = derive2 { name="remMap"; version="0.2-0"; sha256="1k2niiaq2lr4inrx443clff9cqqvyiiwd45k7yqjd8ixnbaa3mrk"; depends=[]; }; rematch = derive2 { name="rematch"; version="1.0.1"; sha256="0y3mshvpvz9csmq8hk8jbabx4nxlv5sckvfzvm6920ndg34xw2d4"; depends=[]; }; @@ -10124,7 +10329,7 @@ in with self; { repijson = derive2 { name="repijson"; version="0.1.0"; sha256="16iypvsmh5r9pk2k6npp17ya5dgkxihsj29pppd3zvdpm3vvd8k1"; depends=[geojsonio ggplot2 jsonlite OutbreakTools plyr sp]; }; replicatedpp2w = derive2 { name="replicatedpp2w"; version="0.1-2"; sha256="0nskwkqm9z2aphpim6pvykhc3fphlsbap3r49nghkwjpngd0qzj8"; depends=[spatstat spatstat_utils]; }; replicationInterval = derive2 { name="replicationInterval"; version="2.0.1"; sha256="1jyvyqr8r2fs1cmbz7zjcc8p116bnkslvx27pqi92y5pxgqvsqvr"; depends=[ggplot2 MASS MBESS pbapply]; }; - replyr = derive2 { name="replyr"; version="0.9.1"; sha256="0vxxmnin8a9mrak33cm01wndbc333dyjh83iyn633yc6ll092klr"; depends=[cdata DBI dbplyr dplyr RSQLite seplyr wrapr]; }; + replyr = derive2 { name="replyr"; version="0.9.4"; sha256="1f8y2ywv7wf15g76949934r2qq2bp75ayfvrcb654q9pf2h5w39v"; depends=[DBI dplyr wrapr]; }; repmis = derive2 { name="repmis"; version="0.5"; sha256="0z5mjbsl24yjbl0aawr35grcal44rf2xbwv1hy7bdkms94ix79b5"; depends=[data_table digest httr plyr R_cache]; }; repo = derive2 { name="repo"; version="2.1.2"; sha256="14a7lw1rvn7n7caz3p3y69n9wqw48qsxsjs5kwvpbwsmap7bjj7l"; depends=[digest]; }; repolr = derive2 { name="repolr"; version="3.4"; sha256="13kmy09c7lk8p1mkdss0krcsfb6d7zcnqpwnl38zkanvh8q3fqhm"; depends=[Matrix Rcpp RcppArmadillo]; }; @@ -10134,7 +10339,7 @@ in with self; { reportr = derive2 { name="reportr"; version="1.2.2"; sha256="1fl4hy4ck4aapy152vn9gjd7w5vgvh2gz2ky6p0wwahah7m9b255"; depends=[ore]; }; reports = derive2 { name="reports"; version="0.1.4"; sha256="0r74fjmdqax2x5fhbkdxb8gsvzi6v794fh81x4la9davz6w1fnxh"; depends=[]; }; reporttools = derive2 { name="reporttools"; version="1.1.2"; sha256="1i87xmp7zchcb8w8g7nypid06l2439qyrvpwsjz6qny954w6fa2b"; depends=[xtable]; }; - repr = derive2 { name="repr"; version="0.12.0"; sha256="1p6a2ryb5iaf4i6nn1iav26bh83wmvncwpk25hyrzd5rxich1bq3"; depends=[]; }; + repr = derive2 { name="repr"; version="0.13"; sha256="0k5796r5z9yr8s1hlx30x4cy1ix4fc85m0lwqf9zdapcvw0iqgld"; depends=[base64enc htmltools]; }; represent = derive2 { name="represent"; version="1.0"; sha256="0jvb40i6r1bh9ysfqwsj7s1g933d7z5fq9d618yjrqr6hbbqsvac"; depends=[]; }; represtools = derive2 { name="represtools"; version="0.1.2"; sha256="1zkabch49q23kd1786km5cb9wcaccbxds11v9hwjzsgrs15g5w35"; depends=[whisker]; }; reprex = derive2 { name="reprex"; version="0.1.2"; sha256="105d9vsmqfilgpw8psfb2wyiz1hvcycvh4cqhb3ab37lm3rcavvs"; depends=[callr knitr rmarkdown whisker]; }; @@ -10161,7 +10366,7 @@ in with self; { restriktor = derive2 { name="restriktor"; version="0.1-80.711"; sha256="10kbfr7gzah119xm4cnx7br9i9fcga38kymjajw7m2571f4jsji9"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; resumer = derive2 { name="resumer"; version="0.0.3"; sha256="0ilya3v75989zqm16x69w4599ax2s5j2n6f16bmhwydrmzxs1g48"; depends=[dplyr rmarkdown useful]; }; rethinker = derive2 { name="rethinker"; version="1.1.0"; sha256="02zfx08s5xisv1v4y16iqbddi9kb3fcr249b3414fzvs4nm5as94"; depends=[rjson]; }; - reticulate = derive2 { name="reticulate"; version="1.5"; sha256="0bbsd87ajw9s37g0m8gpv0rws4jfiic9q31fn5a3lb06r2i4wl53"; depends=[jsonlite Rcpp]; }; + reticulate = derive2 { name="reticulate"; version="1.6"; sha256="036jiwxfvxkkijpilpbzlndm4bg4nd8gx8gxx4dl4zj263gd398m"; depends=[jsonlite Rcpp]; }; retimes = derive2 { name="retimes"; version="0.1-2"; sha256="019sllyfahlqnqry2gqw4w5cy4cavrqnwpwrbb25cgjpdb19raja"; depends=[]; }; retistruct = derive2 { name="retistruct"; version="0.5.12"; sha256="11m4i29i3zqh9chyjgdhzqj4yqlslfm8y4q0x14xxc2r9lqbkj9l"; depends=[foreign geometry png R_matlab rgl RImageJROI RTriangle sp ttutils]; }; reutils = derive2 { name="reutils"; version="0.2.3"; sha256="09dhf4s7wz3anrkzqi16abx64gk8ck2142kfd8pv71mjy3x548l7"; depends=[assertthat jsonlite RCurl tibble XML]; }; @@ -10181,27 +10386,28 @@ in with self; { rfishbase = derive2 { name="rfishbase"; version="2.1.2"; sha256="1w8jk6qfhyzzmxf8qnqqwckm4syrqimi8k6dqmwflgxz6bsxcz0v"; depends=[dplyr httr lazyeval tidyr]; }; rfisheries = derive2 { name="rfisheries"; version="0.2"; sha256="16j3hn1py8khqadmh81qsg76c62wzqkaq3fn39z0z5mgynmcm62j"; depends=[assertthat data_table ggplot2 httr rjson]; }; rflann = derive2 { name="rflann"; version="1.3"; sha256="1y8m52vlrcl69srssd23zgg90yfhh9rryd16hk1dnqg713qhksgm"; depends=[Rcpp RcppArmadillo]; }; + rfm = derive2 { name="rfm"; version="0.1.0"; sha256="0bd71qk6vrd0jnnwdwlh30mn8v8dwwgmffrd71kbq83gbfp8ry3l"; depends=[assertthat dplyr forcats ggplot2 lubridate magrittr purrr RColorBrewer rlang shiny tidyr]; }; rfml = derive2 { name="rfml"; version="0.1.0"; sha256="133adpfjpp14m47841k6ybq9lrvby9bxgr5zs4i3akjr2575nq1j"; depends=[httr jsonlite PKI XML]; }; rfoaas = derive2 { name="rfoaas"; version="1.1.1"; sha256="1rglqmbhnasc3ciypms3qqgfaj19202cnqdimsi69lvig2rnkca5"; depends=[httr]; }; rfordummies = derive2 { name="rfordummies"; version="0.1.3"; sha256="13jqvww65wzac1c8ajkljz89vi4j76y9ga52w3ygajjzg0rn15l5"; depends=[]; }; - rforensicbatwing = derive2 { name="rforensicbatwing"; version="1.3"; sha256="0ff4v7px4wm5rd4f4z8s4arh48hgayqjfpnni2997c92wlsq3d12"; depends=[Rcpp]; }; + rforensicbatwing = derive2 { name="rforensicbatwing"; version="1.3.1"; sha256="1i521h2nmlkhcxfxqir8jfjv0llwr6cz0ck5w6hzplk48044bn16"; depends=[Rcpp]; }; rgabriel = derive2 { name="rgabriel"; version="0.7"; sha256="1c6awfppm1gqg7rm3551k6wyhqvjpyidqikjisg2p2kkhmyfkyzx"; depends=[]; }; rgam = derive2 { name="rgam"; version="0.6.3"; sha256="0mbyyhhyr7ijv2sq9n7g0vaxivngwf4nbb5398xpsh7fxvgw5zdw"; depends=[Rcpp RcppArmadillo]; }; rgbif = derive2 { name="rgbif"; version="0.9.9"; sha256="11gji0b1gzh3zpmaff7ly9pvv6jdig5d1277hrss8x4zj7r34iap"; depends=[crul data_table geoaxe ggplot2 jsonlite magrittr oai tibble whisker wicket xml2]; }; rgcvpack = derive2 { name="rgcvpack"; version="0.1-4"; sha256="1vlvw9slrra18qaizqk2xglzky0i6z3bsan85x908wrg8drss4h5"; depends=[]; }; - rgdal = derive2 { name="rgdal"; version="1.2-16"; sha256="1j83bc16ndk561vgr67z99gba9bhgcchgir8s504avcs9zmfyzq1"; depends=[sp]; }; - rgdax = derive2 { name="rgdax"; version="0.4.0"; sha256="0f8n016p9y62rpxmqrycmbdb7b3h7vnsyd9qcicqs19yvpm91im2"; depends=[digest httr jsonlite RCurl]; }; + rgdal = derive2 { name="rgdal"; version="1.2-18"; sha256="0vyvbsz7260crfnqk61vcbk051d01lyl984yk140nwh9wj8svr1d"; depends=[sp]; }; + rgdax = derive2 { name="rgdax"; version="0.5.0"; sha256="1s9vqjmnkd4jvq5v8w1wc44khgd1pjzr2hq356vm0jpcvgf0qscq"; depends=[digest httr jsonlite RCurl]; }; rgen = derive2 { name="rgen"; version="0.0.1"; sha256="0gl82v09q1ha58wd1014s46wzkx1yf348bc7jkl6s4qdc6c4vsb8"; depends=[]; }; rgenoud = derive2 { name="rgenoud"; version="5.8-1.0"; sha256="12n34r0p00bmflxrmbj927jm0q19j5r9mjplz5mzb1v8praa7v4x"; depends=[]; }; rgeoapi = derive2 { name="rgeoapi"; version="1.1.0"; sha256="0k8p1l0vrgx0bifbc2i9gxxwih513vbqhjh7fiifyfq3r74i4j7k"; depends=[httr magrittr rjson]; }; rgeolocate = derive2 { name="rgeolocate"; version="1.0.1"; sha256="1v9kd71wpxna1war0rbp91pc5wdqlganmj2c2fc5m5176dnxd2v3"; depends=[httr Rcpp]; }; - rgeopat2 = derive2 { name="rgeopat2"; version="0.2.0"; sha256="12n5zgx8svcrgsihvhw0drd0l3r48clshs2b36p0md111a2b1gh3"; depends=[readr sf stringr]; }; + rgeopat2 = derive2 { name="rgeopat2"; version="0.2.4"; sha256="1ngisbx9ws8zllkq2qa7zafl400wrvmj3rm812aja74d8rr2i7mw"; depends=[readr sf stringr]; }; rgeos = derive2 { name="rgeos"; version="0.3-26"; sha256="0czlwfqilzh1zj61axisg06d9dksdvvg5hgcs31ydaqkh45llllq"; depends=[sp]; }; rgexf = derive2 { name="rgexf"; version="0.15.3"; sha256="0iw1vk32ad623aasf6f8hl0qkj59f1dsc2riwqc775zvs5w7k2if"; depends=[igraph Rook XML]; }; rggobi = derive2 { name="rggobi"; version="2.1.21"; sha256="0zi4rhggngm0y8dsjxqlr2mmfc5wzi7l1qcp5gin4bjlbyf8yb3z"; depends=[RGtk2]; }; rgho = derive2 { name="rgho"; version="1.0.1"; sha256="0jkfmyn3i50vsqciy96wd2fpik6yfg0sz6rrhwb04jv1dmyz2nfa"; depends=[curl dplyr httr jsonlite lazyeval magrittr memoise readr tibble tidyr]; }; - rgl = derive2 { name="rgl"; version="0.99.9"; sha256="1rv4gq03mbx62v4kyj83y5kh1f77d68aqwmdb00r8szqlx5w5gdm"; depends=[crosstalk htmltools htmlwidgets jsonlite knitr magrittr shiny]; }; - rglobi = derive2 { name="rglobi"; version="0.2.13"; sha256="15hqcmh8r6lsc60139f9q9kyspkys61q0y39i5wq86lsq6i3q4js"; depends=[RCurl rjson]; }; + rgl = derive2 { name="rgl"; version="0.99.16"; sha256="0q8sg8fr0140ilssqhscaxkjc29w1rpp6f4k50amw3zzs9g58ak9"; depends=[crosstalk htmltools htmlwidgets jsonlite knitr magrittr manipulateWidget shiny]; }; + rglobi = derive2 { name="rglobi"; version="0.2.14"; sha256="09f4v98m68ssnf1n0ijsrzawpri3jhv4bz7gzzzpijb75mkb0zwz"; depends=[RCurl rjson]; }; rglwidget = derive2 { name="rglwidget"; version="0.2.1"; sha256="0siqxn3gyl98i84p0yha821b4rdrp2i0942mkx819wnf7qwrpqcv"; depends=[rgl]; }; rgr = derive2 { name="rgr"; version="1.1.15"; sha256="1mrnmbh2crhkwdi37q59hx76afvkhgzgaacg3688q7jp23d58z6x"; depends=[fastICA MASS]; }; rgrass7 = derive2 { name="rgrass7"; version="0.1-10"; sha256="0w5vy8163xlfmdrpyp00x25wwq4jnaspzggpvj160azigndsc1kr"; depends=[sp XML]; }; @@ -10214,22 +10420,24 @@ in with self; { rhub = derive2 { name="rhub"; version="1.0.2"; sha256="18aq28q4vggbp19l9wcw3dylnyv7sd26wg0i5w8jrva5cq1v2n5j"; depends=[assertthat callr clisymbols crayon desc httr jsonlite parsedate prettyunits R6 rappdirs rcmdcheck rematch whoami withr]; }; rhymer = derive2 { name="rhymer"; version="1.0.0"; sha256="1k15sd5q6a1ijayl585vc54d1zs4nyrxsfck9bn4nlfdiwc5arwf"; depends=[httr jsonlite]; }; ri = derive2 { name="ri"; version="0.9"; sha256="00y01n9cx95bjhdpnh7vi0xd5p6al3sxbjszbyxafn7m9mygmnhv"; depends=[]; }; - ri2 = derive2 { name="ri2"; version="0.1.0"; sha256="02rlczjpfy1q5i7lq4ypindhc65cnryryvbklqjh5dh2xzwjkain"; depends=[estimatr ggplot2 pbapply randomizr]; }; + ri2 = derive2 { name="ri2"; version="0.1.1"; sha256="01iyk9cfs6v7jd1z962vrcdb3bfab5pcq9abkb21yqi82f9w97jf"; depends=[estimatr ggplot2 pbapply randomizr]; }; riceware = derive2 { name="riceware"; version="0.4"; sha256="0pky0bwf10qcdgg9fgysafr35xbmnr9q0jbh56fawj99nbyj3m70"; depends=[random]; }; rich = derive2 { name="rich"; version="1.0.1"; sha256="0kasr9gb85qhngfayqy3fvrsr0a066krwxsx21nsxcnss0mrqygr"; depends=[boot vegan]; }; ridge = derive2 { name="ridge"; version="2.2"; sha256="01yldzzlqg0xqha31l3py62lyq7fw5xfsbmz6ifzff24gqsf029x"; depends=[]; }; ridigbio = derive2 { name="ridigbio"; version="0.3.5"; sha256="0526nscxynl3857zybpms1wr3230qby29kxglm919pcdvpjb5kz5"; depends=[httr jsonlite plyr]; }; + ridittools = derive2 { name="ridittools"; version="0.1"; sha256="1m9xbwxb277l4cd85qxmpw66gyavpwamgwr8kyf8vqarzfbwiilr"; depends=[]; }; riem = derive2 { name="riem"; version="0.1.1"; sha256="0lwhsxb4pm26kb65hs8pa63bsbrgy0zchqm4i6pq9f2r9h8vsm1m"; depends=[httr jsonlite lubridate tibble]; }; rif = derive2 { name="rif"; version="0.2.0"; sha256="0vk3dmg3qzw3i27wbpfih66rx8sdxq033l7h59h3hy960av4hawh"; depends=[crul data_table jsonlite tibble]; }; + riingo = derive2 { name="riingo"; version="0.1.0"; sha256="1lkg0xmy3mhx99ywbvkmnkj6i61r5x75g4fnnwj6vdyslvwf3s5x"; depends=[crayon glue httr jsonlite purrr rlang tibble]; }; rinat = derive2 { name="rinat"; version="0.1.5"; sha256="14ql90f8wrxz9nlykbzfpar1yfwh7p71vks7vhhn8ys09wvj30zk"; depends=[ggplot2 httr jsonlite maps plyr]; }; rindex = derive2 { name="rindex"; version="0.12"; sha256="1k9zihvrp955c4lh70zjlsssviy2app8w6mv5ln4nawackbz0six"; depends=[regtest]; }; ring = derive2 { name="ring"; version="1.0.0"; sha256="03sbgxwzms20gp0hkm5s0dihqkx3qf6bw0jrays7jjzrrwzl5657"; depends=[R6]; }; rintrojs = derive2 { name="rintrojs"; version="0.2.0"; sha256="0qdry88f6ci5g6k0i8mycm9k5ibnmb9zjppjvqqaflw3g3nsnli2"; depends=[jsonlite shiny]; }; - rio = derive2 { name="rio"; version="0.5.9"; sha256="1cb7p0kgas3y84sc1p59zcsp0c4qhg01cs9s7kl927qhral778kd"; depends=[curl data_table foreign haven openxlsx readxl tibble]; }; + rio = derive2 { name="rio"; version="0.5.10"; sha256="158xg3vj0glk3fslwi6fywwmfym2b6kn3fdmjligdfy5lf68khix"; depends=[curl data_table foreign haven openxlsx readxl tibble]; }; rioja = derive2 { name="rioja"; version="0.9-15.1"; sha256="18fyqcykg12mf4ap0a2la30656xq32immqz11ddmrfrb0vpd2h7h"; depends=[mgcv vegan]; }; ripa = derive2 { name="ripa"; version="2.0-2"; sha256="0n1gaga0d4bb9qdlm7gksa1nwi4y28kbgwr3icwqgihf1bfb9m81"; depends=[Rcpp]; }; riskR = derive2 { name="riskR"; version="1.1"; sha256="1qadfyb07idfw0bs006kb3917rzda83di6jmsr22941gv78z1wyv"; depends=[]; }; - riskRegression = derive2 { name="riskRegression"; version="1.4.3"; sha256="1r9habv47wwhnbvcjl6yin4i415ayhisg67rzggv899nqcyqpm80"; depends=[abind cmprsk data_table doParallel foreach ggplot2 lava prodlim Rcpp RcppArmadillo rms survival]; }; + riskRegression = derive2 { name="riskRegression"; version="2018.04.21"; sha256="0jyk5pdgr8wqyfxzwbmanqp7ff0fkw3nlz7dx19rqxji1lnj74qa"; depends=[abind cmprsk data_table doParallel foreach ggplot2 lava plotrix prodlim Rcpp RcppArmadillo rms survival timereg]; }; riskSimul = derive2 { name="riskSimul"; version="0.1"; sha256="0s2a1mn6g11m96gqscb916caj2aykcs3rkacpqcdnlyzryk1gsnb"; depends=[Runuran]; }; risksetROC = derive2 { name="risksetROC"; version="1.0.4"; sha256="1fh0jf8v536qzf1v3awx3f73wykzicli4r54yg1z926ccqb4h80l"; depends=[MASS survival]; }; riskyr = derive2 { name="riskyr"; version="0.1.0"; sha256="1s6yrij5d1vhvzc7nnajjnjmxnhrs0r1psppcvwb0qg3ff181y22"; depends=[diagram vcd]; }; @@ -10243,6 +10451,7 @@ in with self; { rivr = derive2 { name="rivr"; version="1.2"; sha256="0ankpfixggwdv17ba8i5iln0zzmngqrhvh3dg8lis9kqg6wa89yr"; depends=[Rcpp]; }; rjade = derive2 { name="rjade"; version="0.1"; sha256="0f1jljj6m1almz0na984n0g314y0rl6a0mx04rbrpipgfgz1h37c"; depends=[V8]; }; rjags = derive2 { name="rjags"; version="4-6"; sha256="1bc9bzq31liawg3nzwfczf75vgg56fnqjw0997xvlic4ghgbn96g"; depends=[coda]; }; + rjazz = derive2 { name="rjazz"; version="0.1.7"; sha256="0wmqlpgcr98dvapfmdcph5mdv202rzzsvb06iy5sqvpizpg7pbsz"; depends=[RCurl]; }; rje = derive2 { name="rje"; version="1.9"; sha256="1dyd34z6lb0p6zmyax5dpzflgc9a4saka33mvdfcxi5pj0rnygaz"; depends=[]; }; rjson = derive2 { name="rjson"; version="0.2.15"; sha256="1vzjyvf57k1fjizlk28rby65y5lsww5qnfvgnhln74qwda7hvl3p"; depends=[]; }; rjsonapi = derive2 { name="rjsonapi"; version="0.1.0"; sha256="0qshll0y8b6lbfrqmp69w9kc9hgfrz94dk68nddshk9ilg14lx4d"; depends=[crul jsonlite plumber R6]; }; @@ -10253,28 +10462,30 @@ in with self; { rkt = derive2 { name="rkt"; version="1.5"; sha256="1rgf7dnk4d1b46rns2mb2s1ilxq7hqrh057vrrl00324r4h8bs1k"; depends=[]; }; rkvo = derive2 { name="rkvo"; version="0.1"; sha256="0ci8jqf9nc8hb063nckxdnp0nlyr4ghby356lxm00anw44jlmw8v"; depends=[Rcpp]; }; rlang = derive2 { name="rlang"; version="0.2.0"; sha256="0f87fhw5pj6s2zjdxnpnd7pwn78czdz71b0xhm5adqg1p38sfwj8"; depends=[]; }; - rlas = derive2 { name="rlas"; version="1.1.9"; sha256="1c8sc277jiij1j5sb3wsjdm1pxlp0ia3a39xqzglvmlcnlvcygbq"; depends=[data_table Rcpp]; }; + rlas = derive2 { name="rlas"; version="1.2.1"; sha256="0mqs7vd4855hdjymvp6427vhs2ihaz37lx59984x39rc7sfw6nap"; depends=[data_table Rcpp uuid]; }; rld = derive2 { name="rld"; version="1.0"; sha256="1glv4q25z14hcwifwg623h77p4awpsn3nk843pnph4sb3p5qbmn3"; depends=[emdbook MASS survival]; }; rleafmap = derive2 { name="rleafmap"; version="0.2"; sha256="1i2qczipg7lr6fl35lcl896r54jia7libxx83darrfzc1hd9sdcq"; depends=[knitr raster sp]; }; rlecuyer = derive2 { name="rlecuyer"; version="0.3-4"; sha256="0d5mcdzn6f5nhwzs165a24z36d0b8gd0cyfyzffvr6p96h8qydy7"; depends=[]; }; + rlfsm = derive2 { name="rlfsm"; version="0.1.0"; sha256="1ixffrn56s9hg56ygk8882kz4b77sfdd9xb5vnk8b10sl9yjh4r7"; depends=[doParallel elliptic foreach ggplot2 plyr Rdpack reshape2 stabledist]; }; rlist = derive2 { name="rlist"; version="0.4.6.1"; sha256="08awy2p7rykc272wvvya4ddszbr7b7s7qv4wr3hs8ylr4jqlh0dv"; depends=[data_table jsonlite XML yaml]; }; rlm = derive2 { name="rlm"; version="1.2"; sha256="18y735z05k9pms6iv1739qg3q12w099qhs42icxhqs5gcdhz92fm"; depends=[]; }; rlme = derive2 { name="rlme"; version="0.5"; sha256="0p26mw4g12l279lh80vqcjs3pvjr759ap2m622490k1i2ralxzif"; depends=[magic MASS mgcv nlme quantreg Rcpp robustbase stringr]; }; rlo = derive2 { name="rlo"; version="0.3.2"; sha256="0abq42dhapzmh6hvmildbn8zya29c6p1aqbv8avc03g014dwbrd0"; depends=[PythonInR]; }; - rly = derive2 { name="rly"; version="1.4.2"; sha256="0mppl3y808k9ydn1lwng2bqmdzbbsla2p9p8qk73mp0xyq8iq9sm"; depends=[futile_logger R6]; }; + rly = derive2 { name="rly"; version="1.5"; sha256="0rd4ksd6qv227zgdxmy9d77v1jyba0vk0svh5wc5b72z92j9cjzb"; depends=[futile_logger R6]; }; rma_exact = derive2 { name="rma.exact"; version="0.1.0"; sha256="1igs92la79akyqj84ah23lpcay7i33k7zgzcwm7sii782fhirivx"; depends=[abind metafor]; }; rmaf = derive2 { name="rmaf"; version="3.0.1"; sha256="0w247mamwgibr5576p5c2lzaiz2lv2c25n7gw9q99s7rc4bps7j7"; depends=[]; }; - rmapshaper = derive2 { name="rmapshaper"; version="0.3.0"; sha256="0v7p8wqgjymidavyq9lfl6kzlpn5ybfc9lqhsaxbxcc9hb80xjxz"; depends=[geojsonio geojsonlint rgdal sp V8]; }; - rmapzen = derive2 { name="rmapzen"; version="0.3.3"; sha256="0rz3wwy8dbb2620gy07aib2aad6ds001vf47bxrj3vzrxp5h448i"; depends=[assertthat digest dplyr geojsonio httr jsonlite maps maptools purrr rgdal sf sp tibble tidyr]; }; + rmake = derive2 { name="rmake"; version="1.0.0"; sha256="1qvbyd68p37nsqrm77w18znsa6m629qzyd7sl8w98p654pqmjhdw"; depends=[assertthat pryr rmarkdown]; }; + rmapshaper = derive2 { name="rmapshaper"; version="0.4.0"; sha256="0a911f6q9czni6zpijp63rngnil7jkbcy9f7jz55jr225fgm6g6z"; depends=[geojsonio geojsonlint jsonlite readr sf sp V8]; }; + rmapzen = derive2 { name="rmapzen"; version="0.3.4"; sha256="1hpl2j347d5qahwzxlr66k2fl6fg09160jn6p3ycvhp0g7zaq5r4"; depends=[assertthat digest dplyr geojsonio httr jsonlite maps maptools purrr rgdal sf sp tibble tidyr]; }; rmarkdown = derive2 { name="rmarkdown"; version="1.9"; sha256="0wq6kbhrkv3fhcy4hg5yyv9gdvf8gr4nsjwdifs4ih8lnn0dmdyb"; depends=[base64enc evaluate htmltools jsonlite knitr mime rprojroot stringr yaml]; }; rmatio = derive2 { name="rmatio"; version="0.12.0"; sha256="1cw7j44rgjgbw2xln7lh29ln53lwfadr8rx0sffkjwc7lbh1r6wa"; depends=[Matrix]; }; - rmcfs = derive2 { name="rmcfs"; version="1.2.9"; sha256="1ar2dsxjf0a6ij91d380arlh9wlywqpfaii80bk6mrq4xg6qy4b0"; depends=[dplyr ggplot2 igraph reshape2 rJava yaml]; }; + rmcfs = derive2 { name="rmcfs"; version="1.2.10"; sha256="0gyvb8vdv1n93xbz0xl5vhwhskas8cxj4zv8flz18jm6f0bgqlrr"; depends=[dplyr ggplot2 igraph reshape2 rJava yaml]; }; rmcorr = derive2 { name="rmcorr"; version="0.3.0"; sha256="1p05ln653yrd02wmn8wfzawiw6a924d8an0568fcbgl1pdna43b1"; depends=[psych RColorBrewer]; }; rmdHelpers = derive2 { name="rmdHelpers"; version="1.2"; sha256="1ahzbs8z7wvh1dwbq1kq8wrjrknxi2gck63k70gj0swjvgk0ih5r"; depends=[dplyr knitr]; }; - rmda = derive2 { name="rmda"; version="1.4"; sha256="0agh4mrs8mjjb7hc41r59mbnq0h873fmykljla1cbf4ikhxwjihf"; depends=[caret MASS pander reshape]; }; + rmda = derive2 { name="rmda"; version="1.5"; sha256="13119x23xi912s7wl2p2a24msbczgv75x37p2jsr5w0n4l2k01wi"; depends=[caret MASS pander reshape]; }; rmdformats = derive2 { name="rmdformats"; version="0.3.3"; sha256="06nyrdhy26mvgfb1bnlbd8hslybpc01a30a40wwlc3ay7yp0nzrj"; depends=[bookdown htmltools knitr questionr rmarkdown]; }; rmdshower = derive2 { name="rmdshower"; version="2.1.1"; sha256="1sjpi5ils31adii51gaa8ly7x93l9ganp6in8rsln6si4jc2ppg9"; depends=[rmarkdown]; }; - rmeta = derive2 { name="rmeta"; version="2.16"; sha256="1s3n185kk0ddv8v6c7mbc7cpj6yg532r7is6pjf9vda7317rxywy"; depends=[]; }; + rmeta = derive2 { name="rmeta"; version="3.0"; sha256="0vkbnxp579v8zmcv1isdbzj5swpr6fq17zwparxcvzswjc2x9ydr"; depends=[]; }; rmetasim = derive2 { name="rmetasim"; version="3.1.7"; sha256="0sz4mdprdi6sgkfwfdvh2hr9nxiwq17sw0vggq3cvs7lzb0i6m9r"; depends=[ade4 adegenet gtools pegas]; }; rmgarch = derive2 { name="rmgarch"; version="1.3-0"; sha256="0brqjhplvzl0bgsi6x057rb2cg5x372i746dhddr013p1mx0rlcx"; depends=[Bessel ff MASS Matrix pcaPP Rcpp RcppArmadillo Rsolnp rugarch shape spd xts zoo]; }; rminer = derive2 { name="rminer"; version="1.4.2"; sha256="1hjgcawjrwsf0nv2hlznr1cvpm445yyxc6cq28k2yzyivk74si34"; depends=[adabag Cubist e1071 glmnet kernlab kknn lattice MASS mda nnet party plotrix pls randomForest rpart xgboost]; }; @@ -10301,13 +10512,13 @@ in with self; { rnn = derive2 { name="rnn"; version="0.8.0"; sha256="04924zn448x9rc3z9vh033l4rv9lz0hxv1bhfl0gn6gvd5wavlc7"; depends=[shiny sigmoid]; }; rnoaa = derive2 { name="rnoaa"; version="0.7.0"; sha256="0mha1izbzfa6vq44wjsc4p018k83zw99f6bpkhc275c5v09pxvmr"; depends=[crul dplyr geonames ggplot2 gridExtra hoardr httr isdparser jsonlite lubridate rappdirs scales tibble tidyr XML xml2]; }; rnpn = derive2 { name="rnpn"; version="0.1.0"; sha256="10xx8fxgdknv71ks42xxvf38xsmjy6s87y67wi21673v0n07fxb5"; depends=[data_table httr jsonlite plyr]; }; - rnr = derive2 { name="rnr"; version="0.1.0"; sha256="1209gayyn98zdkwv51liq62b2xvza6xndfqkpc73w5dgj1rqn343"; depends=[assertthat purrr]; }; - rnrfa = derive2 { name="rnrfa"; version="1.3.0"; sha256="1zrj7y0qh57r7r9c5pspz238w0j1kaicd2l6vcg92lgxi8b9i558"; depends=[ggmap ggplot2 httr plyr rjson sp stringr xml2 xts]; }; + rnr = derive2 { name="rnr"; version="0.2.1"; sha256="1z9bab3qmq8d79bcvjzldbxlah2w8mqp2ifd0cn1348dafwa0dhi"; depends=[assertthat purrr]; }; + rnrfa = derive2 { name="rnrfa"; version="1.4.0"; sha256="007j6a2hihw7h0vhv6aiz7iymzr3lkzmc1dy5f8b22z5n52k4pl3"; depends=[ggmap ggplot2 httr plyr rgdal rjson sp stringr xml2 xts]; }; roadoi = derive2 { name="roadoi"; version="0.4.1"; sha256="1g4x1gkcrq8pd5vdikhf16ghgd990hhb1m387r2smz21v993cfk8"; depends=[dplyr httr jsonlite miniUI plyr purrr shiny tibble tidyr]; }; roahd = derive2 { name="roahd"; version="1.3"; sha256="1pn2xzc5fnp2hb3fw3gpqng0x9rvpd4qfhx9gclf31algpzaidbb"; depends=[robustbase scales]; }; - robCompositions = derive2 { name="robCompositions"; version="2.0.6"; sha256="1r74w6ssq9fhjain02hr9sz0x2j1fi1waw7319gls69kp73b51hw"; depends=[car cluster cvTools data_table e1071 fpc GGally ggplot2 kernlab MASS mclust pls Rcpp robustbase rrcov sROC VIM]; }; + robCompositions = derive2 { name="robCompositions"; version="2.0.7"; sha256="1ym63s6rn02p42q4mwmxbnh713shs4sc2ayimi053yzix4cnwn7w"; depends=[car cluster cvTools data_table e1071 fpc GGally ggplot2 kernlab MASS mclust pls Rcpp robustbase rrcov sROC VIM zCompositions]; }; robcor = derive2 { name="robcor"; version="0.1-6"; sha256="1hw8simv93jq8a5y79hblhqz157wr8q9dzgm0xhvvv5nkzyqkpzf"; depends=[]; }; - robeth = derive2 { name="robeth"; version="2.7"; sha256="03pnwd3xjb9yv8jfav0s4l9k5pgpampp15ak7z0yvkjs20rvfq3d"; depends=[]; }; + robeth = derive2 { name="robeth"; version="2.7-1"; sha256="06qkrjvg4yps4h6xdb81svx52vlw389z1j4brpv0w9h40ljpxbff"; depends=[]; }; robets = derive2 { name="robets"; version="1.4"; sha256="0lvzfpv6569pjysblhadd05sglx0qvyr9wipb9cpiya4a1992n61"; depends=[forecast Rcpp]; }; robfilter = derive2 { name="robfilter"; version="4.1"; sha256="161rsqyy2gq1n6ysz0l4d4gqvxhs72hznc2d5hljxdaz3sbdzzig"; depends=[lattice MASS robustbase]; }; robis = derive2 { name="robis"; version="1.0.0"; sha256="02spxy33vh675dvhx2v6f06hxzcwfrsmkzb6yk5h30xp21blqv4g"; depends=[dplyr httr jsonlite leaflet]; }; @@ -10347,7 +10558,7 @@ in with self; { rolr = derive2 { name="rolr"; version="1.0.0"; sha256="04nm4q0mlr4w6jb0frykzlyknfn3gn02ysqr5ll5jch6wawichy2"; depends=[survival]; }; rolypoly = derive2 { name="rolypoly"; version="0.1.0"; sha256="11nf7in6n03675l11ynl4rp20rlzy7jli3m518s4sqqxdm8f8ci7"; depends=[data_table dplyr foreach ggplot2 glmnet MASS Matrix matrixcalc]; }; rootSolve = derive2 { name="rootSolve"; version="1.7"; sha256="08ic6ggcc5dw4nv9xsqkm3vnvswmxyhnqnv1rdjv1h2gy1ivpcq8"; depends=[]; }; - rootWishart = derive2 { name="rootWishart"; version="0.4.0"; sha256="028k1h6vibbcnmh35kg0z388c991k8v78ac0fbrv1k2ajqrrl4lg"; depends=[BH Rcpp RcppEigen]; }; + rootWishart = derive2 { name="rootWishart"; version="0.4.1"; sha256="1l9pr3i20hi5k02qnlb3blxhlvp2j0njn74xslw3gcjvyzjlr12j"; depends=[BH Rcpp RcppEigen]; }; roots = derive2 { name="roots"; version="1.0"; sha256="1ssmmmrg18xmqxs6f7dqv07357iwcvk21j1gxsl8s9njbj2plxai"; depends=[animation igraph rARPACK]; }; rope = derive2 { name="rope"; version="1.0"; sha256="06qp6h8cjnz0yacm4r39k99hrw74iyq16h5mqfcki7sf3zqbfm7r"; depends=[]; }; ropenaq = derive2 { name="ropenaq"; version="0.2.6"; sha256="065p4c8l4bqxy00clbjhad8hqw4gg2h2c00b06n2fa5n70z0akgq"; depends=[crul dplyr jsonlite lazyeval lubridate tidyr]; }; @@ -10361,7 +10572,7 @@ in with self; { rosqp = derive2 { name="rosqp"; version="0.1.0"; sha256="0975g7p75bq238g7lr200svsqm9i11z7l331r0igm5ycahljrlsm"; depends=[Matrix R6 Rcpp]; }; rotationForest = derive2 { name="rotationForest"; version="0.1.3"; sha256="1z2wk3mcs5hrahsxralidbc0dd8gxdbwjpr2f71g4g3isfx1ic8d"; depends=[rpart]; }; rotations = derive2 { name="rotations"; version="1.5"; sha256="1zksh6hyxdkm0lvvrld6dgkmhszn6wsjrjzr2xbn3af3gsvsydaa"; depends=[ggplot2 Rcpp RcppArmadillo rgl sphereplot]; }; - rotl = derive2 { name="rotl"; version="3.0.3"; sha256="0pfpgynvdi011m6j6gs98irldpjrdc8rgza36ndk60q2w5z436h4"; depends=[ape assertthat httr jsonlite rentrez rncl]; }; + rotl = derive2 { name="rotl"; version="3.0.4"; sha256="1zc4418gxpd65n60lspsdm15v7apkv6wkf9jqqs152z079ppdrhx"; depends=[ape assertthat httr jsonlite rentrez rncl]; }; roughrf = derive2 { name="roughrf"; version="1.0"; sha256="0nwdynqfb9yzjvi1lykgdkch3b4g09aj8vbd6sf5pyx473s066y4"; depends=[mice nnet randomForest]; }; routr = derive2 { name="routr"; version="0.3.0"; sha256="1mjf1vwrh1k1kjl1kcgqs29zb8h9m05630czsjkz7li3pmvy9mrv"; depends=[assertthat digest httpuv R6 reqres stringi uuid]; }; rowr = derive2 { name="rowr"; version="1.1.3"; sha256="1f93c2yni956flwnxgphn340pc7p6yagr5xnmhinjgk9kvsd07yh"; depends=[]; }; @@ -10377,7 +10588,7 @@ in with self; { rpca = derive2 { name="rpca"; version="0.2.3"; sha256="135q3g8jmn9rwamrc9ss45cnbfyw8kxcbrf0kinw8asz70fihj9z"; depends=[]; }; rpcdsearch = derive2 { name="rpcdsearch"; version="1.0"; sha256="17g3x15qgv2hamlj451sb88i83n8svw5vnmjpijp5cnn5d1jx0d6"; depends=[assertthat combinat dplyr stringr xlsx]; }; rpdo = derive2 { name="rpdo"; version="0.2.3"; sha256="150kd9pvfr7msrh55vsqcj8lv994izlvhxf4g5n1qbzdcaqsdjzp"; depends=[checkr]; }; - rpf = derive2 { name="rpf"; version="0.56"; sha256="089n2mmczvvwga8ak3l0p326qsp83d0cz03lc6fhx6a9w5vhl67i"; depends=[mvtnorm RcppEigen]; }; + rpf = derive2 { name="rpf"; version="0.56.1"; sha256="1332d5fzpsi988k1x57hyydjwrx3gxr3l7hgf946jrd8y1c2nj5d"; depends=[mvtnorm RcppEigen]; }; rpg = derive2 { name="rpg"; version="1.6"; sha256="1vn5cswrkmw98z1dr0f0yjkz3n8kwvjb4zknqg81fzqsagfc89yx"; depends=[getPass RApiSerialize Rcpp uuid]; }; rpgm = derive2 { name="rpgm"; version="1.1.2"; sha256="0pbja877gb3mn7m78lfdl217dm7qsrblq6gwrjh5wbv1nd532hvz"; depends=[]; }; rphast = derive2 { name="rphast"; version="1.6.9"; sha256="111m824z7z0lqdj4kk4cp1yfjhx7d5d9463k892dyvgjvkagvi9g"; depends=[]; }; @@ -10404,7 +10615,7 @@ in with self; { rptR = derive2 { name="rptR"; version="0.9.21"; sha256="0wqh9d372s2222qm5w0wx77l2sj7zvdnl7zvxcn5wfs3cz84fj15"; depends=[lme4 pbapply]; }; rpubchem = derive2 { name="rpubchem"; version="1.5.10"; sha256="06j9ir65ykky5hdbyv74fnddwqd39jxvr6jig0kjqisc75k4spjz"; depends=[base64enc car data_table fingerprint iterators itertools RCurl RJSONIO stringr XML]; }; rqPen = derive2 { name="rqPen"; version="2.0"; sha256="13m21v753njaramgpbhn0lb793b6946crv5v8vl127w38q0z3wyd"; depends=[quantreg regpro]; }; - rquery = derive2 { name="rquery"; version="0.4.0"; sha256="080q99q5bkhdxbnd2xg3mjpyvj3ad2lvvay845h50s9c9gpsn9wp"; depends=[DBI RSQLite wrapr]; }; + rquery = derive2 { name="rquery"; version="0.4.2"; sha256="018m46iqrbs4h20clhqhxydd9y43swhdq1mmb00hvzlfbwbxi05r"; depends=[DBI wrapr]; }; rr = derive2 { name="rr"; version="1.4"; sha256="1c2h6ibjfwrjfqh1if3c90pdh0g2rf3p71j4p9w23xbbrx2l80pl"; depends=[arm coda magic MASS]; }; rrBLUP = derive2 { name="rrBLUP"; version="4.6"; sha256="1bw4pjj9hm9ik5bvvklnlkykhlqm6k7pbkma1iwc3kbg8shpbd18"; depends=[]; }; rrBlupMethod6 = derive2 { name="rrBlupMethod6"; version="1.3"; sha256="1qwv954mhry46ff2ax48xcmnasygi5alv8d413g3qbk2da6i0d8l"; depends=[]; }; @@ -10416,8 +10627,9 @@ in with self; { rredis = derive2 { name="rredis"; version="1.7.0"; sha256="0wzamwpmx20did8xj8x9dllri2ps83viyqjic18ari7i4h1bpixv"; depends=[]; }; rredlist = derive2 { name="rredlist"; version="0.4.0"; sha256="0j2hab26zs9dyg9fggza7yffbvwvnmrk5frbfs2ys8h3hg2x6ncy"; depends=[crul jsonlite]; }; rrefine = derive2 { name="rrefine"; version="1.0"; sha256="1lh3vddrp5k9bhz5spv93w0qm9z5lskpdgxfksys0l3275hzx1lm"; depends=[httr readr rlist]; }; - rreg = derive2 { name="rreg"; version="0.1.2"; sha256="06zang5m39bla4c5wxb9p4fgrn66a69l190z5gnsyp8r6b166x3p"; depends=[directlabels ggplot2]; }; + rreg = derive2 { name="rreg"; version="0.2.1"; sha256="05c2yj58zn43zkmqp4iyblsixsq76hsjkchffl5rkqynvgxi0qzi"; depends=[directlabels ggplot2]; }; rrepast = derive2 { name="rrepast"; version="0.6.0"; sha256="1d6nk6437c4bxbyvpzdlgd1kxh651979m0k7aadi9fl77i5k2x3w"; depends=[digest ggplot2 gridExtra lhs rJava sensitivity xlsx]; }; + rres = derive2 { name="rres"; version="1.0"; sha256="16blkbmma5wj5zigl9yr62kbffyk2amvq45gvgpdj726qdskymcx"; depends=[kernlab Rcpp]; }; rriskDistributions = derive2 { name="rriskDistributions"; version="2.1.2"; sha256="1d9dwgw8la8wwq9cdnl7qibkzbdl4cj0qvf05x7w13ip973dwpaq"; depends=[eha mc2d msm tkrplot]; }; rrlda = derive2 { name="rrlda"; version="1.1"; sha256="06n9jah190cz25n93jlb5zb0xrx91bjvxgswwdx9hdf0fmwrpkvz"; depends=[glasso matrixcalc mvoutlier pcaPP]; }; rroad = derive2 { name="rroad"; version="0.0.5"; sha256="09q5r9wq3vm5wy5aigx9wffv7m0njlp3sma1djm6cp7hhwgss0nj"; depends=[]; }; @@ -10427,11 +10639,11 @@ in with self; { rsae = derive2 { name="rsae"; version="0.1-5"; sha256="1f3ry3jwa6vg2vq2npx2pzzvfwadz8m48hjrqjk860nfjrymwgx5"; depends=[]; }; rsample = derive2 { name="rsample"; version="0.0.2"; sha256="10lmpy4ca045j2fxbz5xzl1w9242dkp6sc8hhrk0fxs0dkfb7amf"; depends=[broom dplyr purrr recipes rlang tibble tidyr]; }; rsatscan = derive2 { name="rsatscan"; version="0.3.9200"; sha256="00vgby24jknq8nl7rnqcwg7gawcxhwq8b7m98vjx2hkqx39n4g21"; depends=[foreign]; }; - rscala = derive2 { name="rscala"; version="2.5.1"; sha256="0az638dlg7nqhj7xf1bwcpv9anqqcif8ni4a8q68lcn2sxb4wamp"; depends=[]; }; + rscala = derive2 { name="rscala"; version="2.5.3"; sha256="0a6l7inx6shyxma0a0kf2jh8402n7xavpday4k7lr316v62lyq29"; depends=[]; }; rscimark = derive2 { name="rscimark"; version="1.0"; sha256="1jsjz4d5bnxb90qqzz42m4nyvm8d8w8bs0m1r5g2n78zmckqb8vy"; depends=[checkmate]; }; rsconnect = derive2 { name="rsconnect"; version="0.8.8"; sha256="019phwamg2irb0ak9y0sn25ihi0a9sfdpa02dz9x0bhpcg55x0li"; depends=[digest packrat PKI RCurl RJSONIO rstudioapi yaml]; }; rscopus = derive2 { name="rscopus"; version="0.5.3"; sha256="1d6265ffmhd6ajlp607y5jy77nqgcrdym6w1j8vnil0705z3swzb"; depends=[httr plyr tidyr]; }; - rscorecard = derive2 { name="rscorecard"; version="0.7.0"; sha256="02bjkk03cppd88dljxj72lngwryhbbffvin8h3fkl7jkcaccsq1z"; depends=[dplyr httr jsonlite lazyeval magrittr]; }; + rscorecard = derive2 { name="rscorecard"; version="0.7.1"; sha256="1j7v383gcb13bi6d1v59pkx6d9g4yichyyh5ads9w82qq6v31xnw"; depends=[dplyr httr jsonlite lazyeval magrittr]; }; rsdepth = derive2 { name="rsdepth"; version="0.1-5"; sha256="064jbb6gnx0sm41w3sbi6mvsbzsfkjqfici6frk8sfm9ybvm591j"; depends=[]; }; rsdmx = derive2 { name="rsdmx"; version="0.5-11"; sha256="06sjkjl9y2fg2yz740a1z5zn4afnjfv1nsykszxsnwn7s23rxi31"; depends=[plyr RCurl XML]; }; rsed = derive2 { name="rsed"; version="0.1.2"; sha256="1rk7wkidvdn1d39a11cbgglz2dg74bbv3v1ijjdx903kgwg3nnrc"; depends=[Smisc]; }; @@ -10440,7 +10652,7 @@ in with self; { rsgcc = derive2 { name="rsgcc"; version="1.0.6"; sha256="12f8xsg6abmhdgkrrc8sfzmv4i1pycq1g0jfad664d17yciw7rhh"; depends=[biwt cairoDevice fBasics gplots gWidgets gWidgetsRGtk2 minerva parmigene snowfall stringr]; }; rsggm = derive2 { name="rsggm"; version="0.3"; sha256="17yzvd5vs2avp0nzk7x9bi4d7p6n9nv7675qpgfpwkfqp25lax73"; depends=[glasso MASS Matrix QUIC]; }; rsig = derive2 { name="rsig"; version="1.0"; sha256="129k78i8kc30bzlphdb68vv3sw2k6xyiwrhw08vhzz6mf3jxlqsh"; depends=[BBmisc glmnet Matrix superpc survcomp survival]; }; - rsimsum = derive2 { name="rsimsum"; version="0.3.0"; sha256="11zc6ga4d4i9bilmbfinkanv3fkz8xpcikc38mxf88lv9jfv0kx1"; depends=[checkmate ggplot2]; }; + rsimsum = derive2 { name="rsimsum"; version="0.3.1"; sha256="0rg3flfh2wwa3xyjsb041k94jryx2yxf8kb0nnvy9wgybn3v1c01"; depends=[checkmate ggplot2]; }; rslp = derive2 { name="rslp"; version="0.1.0"; sha256="06glpdsd309058kxww114j9sshvj6gw9g5sdm4zkmzq3cl91fa6h"; depends=[magrittr plyr stringi stringr]; }; rslurm = derive2 { name="rslurm"; version="0.4.0"; sha256="1ck4ky5d0pf8hnxz1ijbjk0nfyj1hfnhf9la5qrqw2spa09z82ki"; depends=[whisker]; }; rsm = derive2 { name="rsm"; version="2.9"; sha256="1rj2qdlv44hbv1ipv7hdpssn90ypp6bfc7nqdaf9dak0bd6khwni"; depends=[estimability]; }; @@ -10453,9 +10665,9 @@ in with self; { rstack = derive2 { name="rstack"; version="1.0.0"; sha256="19vbfmkd6ymadah1y1w5rn52f4hviddccyc6qj2cv5viqwbwws2z"; depends=[R6]; }; rstackdeque = derive2 { name="rstackdeque"; version="1.1.1"; sha256="0i1qqbfj0yrqbkad8bqc1qlxmyxpn7zycbnq83cdmfbilcmi87ql"; depends=[]; }; rstan = derive2 { name="rstan"; version="2.17.3"; sha256="10fdasqbdwlisnm7hjmgl5f027ypfhni86d1c5fykb09g1pvkjz3"; depends=[BH ggplot2 gridExtra inline Rcpp RcppEigen StanHeaders]; }; - rstanarm = derive2 { name="rstanarm"; version="2.17.3"; sha256="196fi09fpxf3v0kbdf6ci6f8c0mw1vx3g30cmkvl5rm17abhwifs"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen rstan rstantools shinystan StanHeaders survival]; }; + rstanarm = derive2 { name="rstanarm"; version="2.17.4"; sha256="1azggccxj6k8nrz8xlmsv42h0rvwmqfih8xxqn45v7fy9la006p0"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen rstan rstantools shinystan StanHeaders survival]; }; rstansim = derive2 { name="rstansim"; version="0.1.1"; sha256="09hg4ishzp6q90nrl94h21al0ad0jn7fr8brp8f0xa9cvkwlzjpg"; depends=[doRNG doSNOW foreach loo Rcpp rstan]; }; - rstantools = derive2 { name="rstantools"; version="1.4.0"; sha256="1k1nhcy0d2lcnllrdslk4p2d6cp12s5v2vzl5j7l9c7l24syq2ar"; depends=[]; }; + rstantools = derive2 { name="rstantools"; version="1.5.0"; sha256="19rzcfiirw539hxs98j33gccwigdpwf3nj1w5jwwzank217wmgg4"; depends=[]; }; rstatscn = derive2 { name="rstatscn"; version="1.1.1"; sha256="0aj4x3lyrldpgh90v90qbxylndacn5ri5yqff3qy53q45ar7yji3"; depends=[httr jsonlite]; }; rstiefel = derive2 { name="rstiefel"; version="0.10"; sha256="0b2sdgpb3hzal34gd9ldd7aihlhl3wndg4i4b3wy6rrrjkficrl1"; depends=[]; }; rstpm2 = derive2 { name="rstpm2"; version="1.4.1"; sha256="0pgy9a8llj0zzzc06afzd0w11mdbx3xvmjf0qpzvsid1zqdbcqxr"; depends=[bbmle fastGHQuad mgcv numDeriv Rcpp RcppArmadillo survival]; }; @@ -10480,13 +10692,13 @@ in with self; { rtiff = derive2 { name="rtiff"; version="1.4.5"; sha256="0wpjp8qwfiv1yyirf2zj0696zb7m7fpzn953ii8vbmgzhakgr8kw"; depends=[pixmap]; }; rtimes = derive2 { name="rtimes"; version="0.5.0"; sha256="1z8iaxkvd99fnk46vzbw6lax2qayng6s5n1sxn78kvp8py552f61"; depends=[crul data_table dplyr jsonlite tibble]; }; rtimicropem = derive2 { name="rtimicropem"; version="1.3"; sha256="1z7nrmzwdgz7fy2i23rl07jd39sdxqsdmmmkaaxzagj7whd58inj"; depends=[changepoint dplyr ggplot2 knitr lazyeval lubridate pathological R6 rbokeh readr stringr tibble tidyr]; }; - rtip = derive2 { name="rtip"; version="1.1.0"; sha256="1fpxg85lhdvc68rr13x1w7k9s7j0cwsc18gc579bd44jqpgfkw72"; depends=[boot ggplot2 mvtnorm plyr]; }; + rtip = derive2 { name="rtip"; version="1.1.1"; sha256="0lfny8nvgnf90xsmgmr32nzjbw8117m4vw7d0bc3xm4pzpnymjdq"; depends=[boot ggplot2 mvtnorm plyr rootSolve]; }; rtk = derive2 { name="rtk"; version="0.2.5.4"; sha256="1nh757l4ih5pmmh7b84ca1f5wpz9mcksdb0a4rvs2hhgap38ihg9"; depends=[Rcpp]; }; rtkore = derive2 { name="rtkore"; version="1.5.1"; sha256="03vmgrsil5yrrs3ndgqvfcwv9plcawc8v2y2x9nwcashxg40djn6"; depends=[Rcpp]; }; - rtop = derive2 { name="rtop"; version="0.5-13"; sha256="1md9sgsmbc3jv1lc4l6r26830k9vjljjqpzzna4s23bn6ky7glgp"; depends=[gstat rgdal sp]; }; + rtop = derive2 { name="rtop"; version="0.5-14"; sha256="1wwllckginnzisapbklpsizy47db24r83xahq4qsd8zhqvv9yj33"; depends=[gstat sp]; }; rtrends = derive2 { name="rtrends"; version="0.1.0"; sha256="04xdggf36m294drb9z8khdjr6fgsg4bwkb4mmbbvqfzjpq4mq4y1"; depends=[dplyr lubridate tidyr]; }; - rtrim = derive2 { name="rtrim"; version="1.0.1"; sha256="134j5sv9dvcq1n37rry7615nr3pa54by6r7ss7fagcmy4lnma2ps"; depends=[]; }; - rts = derive2 { name="rts"; version="1.0-38"; sha256="1m9kir2snfhxyagsflp4cyii33ycw4fr0f8bn7r92757l92i7vr7"; depends=[raster RCurl sp xts zoo]; }; + rtrim = derive2 { name="rtrim"; version="2.0.4"; sha256="1xl3xai768idnfc30hp20cnpq3a07049p7vpkqpdrpla6a8zhvqk"; depends=[]; }; + rts = derive2 { name="rts"; version="1.0-45"; sha256="11gvgj5bqiacsf51sg4dj7jpsjgdj6j26vqc8by15325a4c804ml"; depends=[raster RCurl sp xts zoo]; }; rtson = derive2 { name="rtson"; version="1.3"; sha256="1gwvk7nmq9bz90jy1zh7lhr735iw804pmwxykdpaigcsnxk7zx03"; depends=[R6]; }; rtweet = derive2 { name="rtweet"; version="0.6.0"; sha256="0bh483wfl4f8xscdyv3ys5hhdabc91dynlbqlxxv8mil7pgg3chg"; depends=[bit64 httr jsonlite magrittr openssl readr tibble]; }; rtype = derive2 { name="rtype"; version="0.1-1"; sha256="0wjf359w7gb1nrhbxknzg7qdys0hdn6alv07rd9wm6zynnn1vwxy"; depends=[]; }; @@ -10501,18 +10713,18 @@ in with self; { rusda = derive2 { name="rusda"; version="1.0.8"; sha256="0xx72jjf1pyixwpnvvgx5n2vc5gl46bam1caav043iqki68wb338"; depends=[foreach httr plyr RCurl stringr taxize testthat XML]; }; rusk = derive2 { name="rusk"; version="0.1"; sha256="05ci4f0k2b54sqf0h6j38h3kkq3r27klva0hfg968snr9bb6v0wv"; depends=[dplyr ggforce ggplot2 reshape2 shiny tidyr]; }; rust = derive2 { name="rust"; version="1.3.4"; sha256="1jb970kskl2wdhqcjbxl8gh986abdy96jbipnsdi3656ic5dxivn"; depends=[Rcpp RcppArmadillo spatstat]; }; - ruv = derive2 { name="ruv"; version="0.9.6"; sha256="12zi775nx6k1j9sz691x6r9r0arfnhwddf5nxbr1xk25dj9qa210"; depends=[]; }; + ruv = derive2 { name="ruv"; version="0.9.7"; sha256="1ynxmax9sz74s8abmmizla6jas385mn5ij151mq35k0yv1xszzj5"; depends=[ggplot2 gridExtra scales]; }; rv = derive2 { name="rv"; version="2.3.2"; sha256="108s9q19h5ypxb9w4a8nk97js261izag1sf75g4xfqblwxxrbflc"; depends=[]; }; rvHPDT = derive2 { name="rvHPDT"; version="3.0"; sha256="05nrfnyvb8ar7k2bmn227rn20w1yzkp1smwi4sysc00hyjrlyg8s"; depends=[gtools]; }; rvTDT = derive2 { name="rvTDT"; version="1.0"; sha256="09c2fbqnlwkhaxfmgpsdprl0bb447ajk9xl7qdlda201fvxkdc8v"; depends=[CompQuadForm]; }; rvcheck = derive2 { name="rvcheck"; version="0.0.9"; sha256="14pa7fa7yyhmk0v5md7x5xr5jd4gjwjlvgbynnhq30fj56qffyvf"; depends=[]; }; rversions = derive2 { name="rversions"; version="1.0.3"; sha256="0i2gi05nrvknr7g89rbppkswyfcwwd4r9gp75fdfhpah8sgq1l11"; depends=[curl xml2]; }; - rvertnet = derive2 { name="rvertnet"; version="0.6.2"; sha256="12qffkkl3yqiqh0zi4zrj6irv7jnylja7fv21h3fnjpvqwkazv8a"; depends=[crul dplyr ggplot2 jsonlite maps]; }; + rvertnet = derive2 { name="rvertnet"; version="0.7.0"; sha256="01z3ij5z21v901hz4l9173r4pa9jz2nl7bx086ka1bxvcy0dgqgj"; depends=[crul dplyr ggplot2 jsonlite maps]; }; rvest = derive2 { name="rvest"; version="0.3.2"; sha256="04mv99z8dixywx96kfy4215g6ib23s7qvd77hcf9pxqxzcvqhvhd"; depends=[httr magrittr selectr xml2]; }; rvg = derive2 { name="rvg"; version="0.1.8"; sha256="03hank94b5d1spig9jzrm5h2xbipi8skwqjg8sfwxwy5sjyrbaam"; depends=[gdtools officer Rcpp xml2]; }; rvgtest = derive2 { name="rvgtest"; version="0.7.4"; sha256="1lhha5nh8fk42pckg4ziha8sa6g20m0l4p078pjj51kz0k8929ng"; depends=[]; }; rvinecopulib = derive2 { name="rvinecopulib"; version="0.2.7.1.0"; sha256="1w3nwxpvmmkcvyymhz434xh6srjc87hj824bcjydmavx221ncf6p"; depends=[BH lattice Rcpp RcppEigen RcppThread]; }; - rwalkr = derive2 { name="rwalkr"; version="0.3.2"; sha256="0vp7iizc6bn3y30vcrvksy91aiid52q01vgzjphc5m5sy99gsxj2"; depends=[dplyr httr tibble tidyr]; }; + rwalkr = derive2 { name="rwalkr"; version="0.3.3"; sha256="03kpv4hvlajm09cqrlihia62pcj1skakx28ci4mgbfgpjy6l4jsl"; depends=[dplyr httr tibble tidyr]; }; rwars = derive2 { name="rwars"; version="1.0.0"; sha256="0kmwpr6gn3xsf0pqx153vblpjbhc34mzlgyv8xb2nw78nf8znfij"; depends=[httr]; }; rwc = derive2 { name="rwc"; version="1.1"; sha256="0gdpskj87wjnpas90i3iqn1qv6frrki2xqiyyakg3zpaviw1imag"; depends=[MASS Matrix mvtnorm raster]; }; rwfec = derive2 { name="rwfec"; version="0.2"; sha256="0wmalfms59zi8jdn2s2qbcdckfkifl9vg19hzx4389mm5gk6qsbh"; depends=[Rcpp]; }; @@ -10536,7 +10748,7 @@ in with self; { sEparaTe = derive2 { name="sEparaTe"; version="0.2.1"; sha256="0k1c0wa052f1fprc9jn0i3g2cawxfhkan998jlhkr4iy986jynw9"; depends=[]; }; sExtinct = derive2 { name="sExtinct"; version="1.1"; sha256="1l6232z6c4z3cfl1da94wa6hlv9hj5mcb85fj1y0yparkvvl8249"; depends=[lattice]; }; sFFLHD = derive2 { name="sFFLHD"; version="0.1.1"; sha256="19zhx0rc6h44301a5q68r9jbxzh12ci3387d1c319vdiw05nschy"; depends=[conf_design DoE_base]; }; - sGMRFmix = derive2 { name="sGMRFmix"; version="0.1.3"; sha256="19kfcg36yvwcsq24cn16s5zv9l42rnd9yk2p85j40d6f00ncivkr"; depends=[ggplot2 glasso mvtnorm tidyr zoo]; }; + sGMRFmix = derive2 { name="sGMRFmix"; version="0.3.0"; sha256="183i3159k2cxpanm09zcy2y1vvjd6185gjjf81c3284prw3aky2c"; depends=[ggplot2 glasso mvtnorm tidyr zoo]; }; sNPLS = derive2 { name="sNPLS"; version="0.3.31"; sha256="0ja2f4n000r7cvf0jj2qypa5mfkikig47hfpqwh4611sl70qgx2y"; depends=[car ggplot2 ks MASS Matrix pbapply plotrix rgl]; }; sRDA = derive2 { name="sRDA"; version="1.0.0"; sha256="0g11smn4adm3b79m9w7wzcragxggkf8rrrsgj2yzdhm1d7zzjwbk"; depends=[doParallel elasticnet foreach Matrix mvtnorm]; }; sROC = derive2 { name="sROC"; version="0.1-2"; sha256="0cp6frhk9ndffb454dqp8fzjrla76dbz0mn4y8zz1nbq1jzmz0d3"; depends=[]; }; @@ -10549,13 +10761,14 @@ in with self; { sads = derive2 { name="sads"; version="0.4.1"; sha256="1ir5cfjw3416gg7bvfp2qrn9qy1xbklb9a57rp06ghjg7d4slwpr"; depends=[bbmle GUILDS MASS poilog VGAM]; }; sae = derive2 { name="sae"; version="1.1"; sha256="1izww27cqd94yrfbszbzy44plznxsirzn0752ag7xw7qzm5ywp3d"; depends=[MASS nlme]; }; sae2 = derive2 { name="sae2"; version="0.1-1"; sha256="0fbbh2s0gjhyhypaccnd37b5g2rhyzq7mrm6s0z36ldg1pzi4dd9"; depends=[MASS]; }; - saeRobust = derive2 { name="saeRobust"; version="0.1.0"; sha256="1zin9ix4wx3qbx2mfjyn61l0g1k4dgn4ps79qn21y6l9r647ya9q"; depends=[aoos assertthat ggplot2 magrittr MASS Matrix memoise modules Rcpp RcppArmadillo spdep]; }; + saeRobust = derive2 { name="saeRobust"; version="0.2.0"; sha256="1bdfrsm59xwkga0kxl3r5n83mhhkyzj7gplrgx26gyflashyd1zc"; depends=[aoos assertthat ggplot2 magrittr MASS Matrix memoise modules pbapply Rcpp RcppArmadillo spdep]; }; saeSim = derive2 { name="saeSim"; version="0.9.0"; sha256="19l41qpwspccphmgxi20p7f473lxxh8d86b0wyy5jq24phhd8awx"; depends=[dplyr functional ggplot2 MASS parallelMap spdep]; }; saemix = derive2 { name="saemix"; version="2.1"; sha256="1g52vkqg2dfld7miakkmp23yf4yzc7ka0hbg2fl6ya9cq9m7wyqq"; depends=[]; }; saery = derive2 { name="saery"; version="1.0"; sha256="09x1v627llqbpiwkh1wr0z7gsndfdrjzag2hprhq1adbzh05k47z"; depends=[]; }; safeBinaryRegression = derive2 { name="safeBinaryRegression"; version="0.1-3"; sha256="1g68r6pp5l41rbgyfqgcha1gpsisnl0ybdmdqr4ylr43f61dpgvd"; depends=[lpSolveAPI]; }; safer = derive2 { name="safer"; version="0.2.0"; sha256="0659xn8jzd5md2mm71p4036ljrfvlhkfshsgidx7l2k9ig532059"; depends=[assertthat base64enc sodium]; }; safi = derive2 { name="safi"; version="1.0"; sha256="1km58w57kdmyfj4a97zhnjcka4q4pxm8r2br01qq2niaihpbzp98"; depends=[]; }; + salesforcer = derive2 { name="salesforcer"; version="0.1.2"; sha256="02a4xzwphy5zfkd0qza6cm2n7dpf71bmc6r78gj17w4amrp3k5y5"; depends=[dplyr httr jsonlite lubridate purrr readr XML xml2]; }; samon = derive2 { name="samon"; version="4.0.0"; sha256="0pvv93ahh0i69ncc3sic9481wd5rv5dfxysxyzkl61ds3yvrr09v"; depends=[]; }; sampSurf = derive2 { name="sampSurf"; version="0.7-4"; sha256="0azs8d1d4cp5vzrlzpn2lbqmbha6rxq109apg6hr2hf7i81g19d7"; depends=[boot lattice latticeExtra raster rasterVis sp]; }; sampleSelection = derive2 { name="sampleSelection"; version="1.2-0"; sha256="1s3p5fvvxkjkm6vjpxi3rw8ncbmyvqpfb0gghcvf2sspdyzam1s2"; depends=[Formula maxLik miscTools mvtnorm systemfit VGAM]; }; @@ -10589,11 +10802,11 @@ in with self; { sbgcop = derive2 { name="sbgcop"; version="0.975"; sha256="0f47mvwbsym4khwgl0ic3pqkw3jwdah9a48qi3q93d46p2xich61"; depends=[]; }; sbioPN = derive2 { name="sbioPN"; version="1.1.0"; sha256="0yvg55xnkhm35hfl7rldy2grb26hm4a68jr4x9n45fs7hhdylxri"; depends=[]; }; sbmSDP = derive2 { name="sbmSDP"; version="0.2"; sha256="1sl46lqi6w0s7ghv4bywhic56cm2vib3kawprga760m6igargx4y"; depends=[Rcpp RcppArmadillo]; }; - sbpiper = derive2 { name="sbpiper"; version="1.5.0"; sha256="0ighjp1934y3f6myl60fjxman7333yi9fnhhk3d5xgazsfb8bnnp"; depends=[colorRamps data_table ggplot2 Hmisc reshape2 scales stringr]; }; + sbpiper = derive2 { name="sbpiper"; version="1.6.0"; sha256="00i6wp893rsmm688si3yja7bphmz6ixidhchg2j2h50cfik9q18h"; depends=[colorRamps data_table factoextra FactoMineR ggplot2 Hmisc reshape2 scales stringr]; }; sbrl = derive2 { name="sbrl"; version="1.2"; sha256="1d0f2mlzzcghhvqagrr954qa69b5v47milw3iazxihh8q1qlird2"; depends=[arules Rcpp]; }; sbtools = derive2 { name="sbtools"; version="1.1.6"; sha256="1wvd7xbkfyx88bi1vz30c6jb20fgsrcgpvkw4g4ym0966vhv1ca1"; depends=[curl httr jsonlite stringr]; }; scaRabee = derive2 { name="scaRabee"; version="1.1-3"; sha256="1yap3hi36f8hk93jn59nxrbgq8iw0xwkkm3pc2gb50cpcpaq41pd"; depends=[deSolve lattice neldermead]; }; - scagnostics = derive2 { name="scagnostics"; version="0.2-4"; sha256="0fhc7d2nfhm8w6s6z1ls6i8d7c90h4q7rb92rz8pgq3xh031hpcf"; depends=[rJava]; }; + scagnostics = derive2 { name="scagnostics"; version="0.2-4.1"; sha256="1azg1xlid63l9mcyns9yyl3a3hykbl0sl0h5jhyvzjzahfyanq53"; depends=[rJava]; }; scaleboot = derive2 { name="scaleboot"; version="0.3-4"; sha256="16shdj4b8pbdbphqzw7r5xzx6k2qfkr729inv21gkp9qcp4h0vrm"; depends=[mvtnorm pvclust]; }; scales = derive2 { name="scales"; version="0.5.0"; sha256="0zg9wfzmsdjxpbld0nzv7hcpq5r0wazqxmn7grvvif2agj0w1z6v"; depends=[dichromat labeling munsell plyr R6 RColorBrewer Rcpp viridisLite]; }; scalpel = derive2 { name="scalpel"; version="1.0.0"; sha256="0zk81q2f49vrbprlvjq3q4s2ak7rrlpj55rrfkqr8nq1vvi6nxd2"; depends=[gam igraph Matrix protoclust R_matlab SDMTools]; }; @@ -10605,8 +10818,8 @@ in with self; { scar = derive2 { name="scar"; version="0.2-1"; sha256="04x42414qxrz8c7xrnmpr00r46png2jy5giwicdx6gx8jwrkzhzs"; depends=[]; }; scatr = derive2 { name="scatr"; version="1.0.1"; sha256="1c2z722i7d7qflh4mzb8kkix5i22wph98kwz2p98x2mhaml8802d"; depends=[cowplot ggplot2 ggridges ggstance jmvcore R6]; }; scatterD3 = derive2 { name="scatterD3"; version="0.8.2"; sha256="1cfh060ffwxy33b1f7n8mba1sbbwgx28mqn08im16dqbphkcmx1z"; depends=[digest ellipse htmlwidgets]; }; - scatterpie = derive2 { name="scatterpie"; version="0.0.8"; sha256="1dfwz83hxdms7qglsz540wszzcd5hfmjzw440c93jgi18n6kx9s4"; depends=[ggforce ggplot2 tidyr]; }; - scatterplot3d = derive2 { name="scatterplot3d"; version="0.3-40"; sha256="0ababcj87kx7860mica9y2ydlhskxmgj9n46crx036cila512jc2"; depends=[]; }; + scatterpie = derive2 { name="scatterpie"; version="0.1.0"; sha256="0ssfvnwwfyavzxxrbimb623pc0y72qvbis16sdr6fxvyfif4qmm5"; depends=[ggforce ggplot2 rlang tidyr]; }; + scatterplot3d = derive2 { name="scatterplot3d"; version="0.3-41"; sha256="152xqz9c70qab86mpgng049gxsg5f4fpf1m8dh93fb9v1avjd0sc"; depends=[]; }; scclust = derive2 { name="scclust"; version="0.1.1"; sha256="1bml4qyyspwaqxzwjhqy8i450614p3f3dj0s0qdkv6psa60h0w5z"; depends=[distances]; }; scdensity = derive2 { name="scdensity"; version="1.0.2"; sha256="173xm3bf8vxl30zk4n451al7m003byg9q4d1l1pfyfa4xnv8qdg9"; depends=[lpSolve quadprog]; }; scdhlm = derive2 { name="scdhlm"; version="0.3.1"; sha256="1b5x4kqvmkpb8wbgfhnwqakisw6hfnvama2bsnd8kvw4alfanxhm"; depends=[nlme]; }; @@ -10623,7 +10836,7 @@ in with self; { sclero = derive2 { name="sclero"; version="0.2"; sha256="1vqysby822s958msnwcqmz78193vrgmpf6si1jnfb9cj90hh7wgg"; depends=[plyr RImageJROI spatstat]; }; scmamp = derive2 { name="scmamp"; version="0.2.55"; sha256="17qhj9l1akxachaimy9d5rls8adph8aalj3qr6ckip29a8ma9gf7"; depends=[ggplot2 graph reshape2 Rgraphviz]; }; score = derive2 { name="score"; version="1.0.2"; sha256="1p289k1vmc7qg70rv15x05dyb92r7s6315whr1ibi40sqln62a5s"; depends=[msm]; }; - scorecard = derive2 { name="scorecard"; version="0.1.5"; sha256="1cf4cmn3csbv1l3nnr3873vszp7xb5v4864g072mwzg7xr1maj4w"; depends=[data_table ggplot2 gridExtra]; }; + scorecard = derive2 { name="scorecard"; version="0.1.6"; sha256="1k5vcjd574i493wazckyg6a0b4pf9b833rqppq444lwvkag7qn2q"; depends=[data_table doParallel foreach ggplot2 gridExtra]; }; scorer = derive2 { name="scorer"; version="0.2.0"; sha256="1mc4hxcrqzh4dmz5fy40740bnrp4fxia81fj3cdw9382p67ivhim"; depends=[Rcpp]; }; scoring = derive2 { name="scoring"; version="0.6"; sha256="114jlpbnm15fdan5lr40adxdzwajy3yhdw6dm4kvkvky6qhcx7q5"; depends=[]; }; scoringRules = derive2 { name="scoringRules"; version="0.9.4"; sha256="0m8050qqb3j0miwfbadp6lmd2q5vicsqn4waw4jszz52fhb8mv27"; depends=[MASS Rcpp RcppArmadillo]; }; @@ -10632,6 +10845,7 @@ in with self; { scraEP = derive2 { name="scraEP"; version="1.0"; sha256="1pmab2nhymb7vjfg7vysqn2cs9apdkwxgi55qn8kjg2g5r0098p7"; depends=[RCurl XML]; }; scrapeR = derive2 { name="scrapeR"; version="0.1.6"; sha256="1rqgqpn9rc43rh356z9gb51pjhdczr9a9mgv0i078nniq156rmlb"; depends=[RCurl XML]; }; scrime = derive2 { name="scrime"; version="1.3.3"; sha256="1vp7ai10m0f3s0hywyqh0yllxj6z6p795zqpr6vp58fh6yq20x73"; depends=[]; }; + scriptName = derive2 { name="scriptName"; version="1.0.0"; sha256="0jpr9x5hf45cik5zxqw0j3vkvbk04a7ck2crvb2472hrv7s9al55"; depends=[purrr rlang]; }; scriptests = derive2 { name="scriptests"; version="1.0-16"; sha256="11l145gvzkxqwbzw976rq94krly1p4lahqw051dwaacarq4hnrdg"; depends=[]; }; scriptexec = derive2 { name="scriptexec"; version="0.2.1"; sha256="09gaccqadb51ia66xk9vi3p9472s82bg6v8i6ba390g04yipbipi"; depends=[]; }; scrm = derive2 { name="scrm"; version="1.7.2-1"; sha256="123rxx1a13fbv975hp9f9rjcigp8vfai7679wbn9dlyvph5nivaz"; depends=[Rcpp]; }; @@ -10640,8 +10854,8 @@ in with self; { scuba = derive2 { name="scuba"; version="1.9-1"; sha256="1b92b6p9dn54rmcaw2ng41pvvvkmrzgg12d6zcr3yh8qgi89pvdi"; depends=[]; }; sdPrior = derive2 { name="sdPrior"; version="0.3"; sha256="0d3w75p3r2h07xhp7fj4si1y4sav8vs0lq6h2h4fn4f2inn3l0vl"; depends=[caTools GB2 MASS]; }; sda = derive2 { name="sda"; version="1.3.7"; sha256="1v0kp6pnjhazr8brz1k9lypchz8k8gdaby8sqpqzjsj8klghlcjp"; depends=[corpcor entropy fdrtool]; }; - sdat = derive2 { name="sdat"; version="1.0"; sha256="1rp2s3y44f3vj0p16j1k2rrs44kmnzy9k0lpcm9ga801nbv93saz"; depends=[]; }; - sdcMicro = derive2 { name="sdcMicro"; version="5.1.0"; sha256="06rnnm5g7rpbbxgdb9sl7gkcimdbx1qmgzg5d2n0jl4b81jac2n2"; depends=[car cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase sets shiny shinyBS VIM xtable]; }; + sdat = derive2 { name="sdat"; version="1.1"; sha256="1mxijw2yfblqjvqqb2xrzhfn9c872i1q9ggw24xicvr2fk4lvjw6"; depends=[]; }; + sdcMicro = derive2 { name="sdcMicro"; version="5.2.0"; sha256="1kfws4y59x7blvv8ix1xvwi92ccfsjnjlifs89jj18wjlb2khjsw"; depends=[car carData cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase sets shiny shinyBS VIM xtable]; }; sdcTable = derive2 { name="sdcTable"; version="0.22.8"; sha256="134a0g1v5w9airckn1bqp4k7hv2dcl5kmb1hx78nw5s8h92y3gkc"; depends=[data_table lpSolveAPI Rcpp Rglpk slam stringr]; }; sdcTarget = derive2 { name="sdcTarget"; version="0.9-11"; sha256="18cf276mh1sv16xn0dn8par4zg8k7y8710byxiih6db4i616fjpi"; depends=[doParallel foreach magic tuple]; }; sddpack = derive2 { name="sddpack"; version="0.9"; sha256="1963l8jbfwrqhqcpif73di9i5mb996r4f8smjyil6l7sdir7cg9l"; depends=[]; }; @@ -10659,6 +10873,7 @@ in with self; { seaaroundus = derive2 { name="seaaroundus"; version="1.2.0"; sha256="09nyypzylb0y04ssd9ak2cw8wpy6a3nmabg9p7jrc8qz54wl6z4q"; depends=[crul ggplot2 jsonlite maps rgdal scales sp wicket]; }; seacarb = derive2 { name="seacarb"; version="3.2.6"; sha256="1036hrmgv7xn0khddbfdg0p9d4hmhhxxb3fd7fysjmzlk7k7naqb"; depends=[gsw oce]; }; sealasso = derive2 { name="sealasso"; version="0.1-2"; sha256="0cjy3fj170p5wa41c2hwscmhqxwkjq22vhg9kbajnq7df2s20jcp"; depends=[lars]; }; + sealr = derive2 { name="sealr"; version="0.1.0"; sha256="1ky0m120bf4mmb0c99ywrzr2jjx3cljscf9vnsnp54rkabh1q2mm"; depends=[clipr clisymbols digest dplyr glue magrittr purrr rlang rstudioapi styler tibble tidyr]; }; searchConsoleR = derive2 { name="searchConsoleR"; version="0.3.0"; sha256="1z8bdlxq2sk8bcg164wy0yrmsx0inf0aj5ya2pybvadss8wr0qlr"; depends=[googleAuthR stringr]; }; searchable = derive2 { name="searchable"; version="0.3.3.1"; sha256="0xc87i2q42j7dviv9nj4hkgjvpfiprkkjpgzwsy47vp7q8024dv0"; depends=[magrittr stringi]; }; searcher = derive2 { name="searcher"; version="0.0.2"; sha256="0lj7zyqldr8m7ky20frzaxmf9by2h3p89ibwsa7dyrf378swkwwj"; depends=[]; }; @@ -10681,6 +10896,7 @@ in with self; { segclust2d = derive2 { name="segclust2d"; version="0.1.0"; sha256="0kymw36cvakx84c96npkbnsvv0a1s82773ib5c802ybvkb2r1k9p"; depends=[dplyr ggplot2 magrittr plyr RColorBrewer Rcpp RcppArmadillo reshape2 scales zoo]; }; segmag = derive2 { name="segmag"; version="1.2.4"; sha256="1i717xg1z7s35pkwzywgjf9wx7zj9xksv0k87h7p1q62y073qbqm"; depends=[plyr Rcpp]; }; segmented = derive2 { name="segmented"; version="0.5-3.0"; sha256="0nrik5fyq59hwiwjcpbi4p5yfavgfjq6wyrynhkrbm4k6v1g1wlq"; depends=[]; }; + segregation = derive2 { name="segregation"; version="0.0.1"; sha256="0avapyr8h0c4hl0xchazr5gig9857y25xx4js788liy679iczwf7"; depends=[data_table]; }; seismic = derive2 { name="seismic"; version="1.0"; sha256="02d11c3filzghi8cvryikaidmk40d4z3qxsqs7bjdhxyf814caw8"; depends=[]; }; seismicRoll = derive2 { name="seismicRoll"; version="1.1.2"; sha256="183lx9lgmi06lv1l4gbmlmblfgjzhph4aavdnxrykpp6122hsq61"; depends=[Rcpp]; }; sejmRP = derive2 { name="sejmRP"; version="1.3.4"; sha256="1j3sadbp12fip3n96s0hx1sg4kzwx8z01p1c905kv8gffhkz9bh0"; depends=[cluster DBI dplyr factoextra RPostgreSQL rvest stringi tidyr XML xml2]; }; @@ -10689,7 +10905,7 @@ in with self; { selection = derive2 { name="selection"; version="1.0"; sha256="1w2mzb16frcbh55icc5g8ai3hri9j6dhp7h0kc96iaspphnfw4n8"; depends=[fifer norm]; }; selectiongain = derive2 { name="selectiongain"; version="2.0.591"; sha256="11gd9xdn3jl3mg3c9ykw8bqvcxhihn19iqsy8dl8bacijjv84bva"; depends=[mvtnorm]; }; selectiveInference = derive2 { name="selectiveInference"; version="1.2.4"; sha256="1k7lnf6fplnxp3giwinldg9g5spi21infln21k413dv3wkksk71f"; depends=[glmnet intervals survival]; }; - selectr = derive2 { name="selectr"; version="0.3-2"; sha256="0kdrj64rqg4z6hg92y9r2h602a2i73r5rnlpg23ys33d5d32n8jy"; depends=[stringr]; }; + selectr = derive2 { name="selectr"; version="0.4-1"; sha256="1jp27rxks4w29l47k42869hp8hnkzq2rnvsqbr44wd19fqb2zm4b"; depends=[R6 stringr]; }; selectspm = derive2 { name="selectspm"; version="0.2"; sha256="0wvhlzhl0janhms107xczmilpmr4y26jgk0ag3g34iqba7fbnfqd"; depends=[ecespa spatstat]; }; seleniumPipes = derive2 { name="seleniumPipes"; version="0.3.7"; sha256="1krpzh2gy3yl07c2n1d8q21xjc2qcv5ac1kv7212710bxkdyfad6"; depends=[httr jsonlite magrittr whisker xml2]; }; selfea = derive2 { name="selfea"; version="1.0.1"; sha256="0zyxbd5vg8nhigill3ndcvavzbb9sbh5bz6yrdsvzy8i5gzpspvx"; depends=[ggplot2 MASS plyr pwr]; }; @@ -10698,6 +10914,7 @@ in with self; { semGOF = derive2 { name="semGOF"; version="0.2-0"; sha256="1lsv72yaza80jqadmah7v2cpfqfay57y12hcz6brvia6bmr5qagb"; depends=[MASS matrixcalc sem]; }; semPLS = derive2 { name="semPLS"; version="1.0-10"; sha256="0q5linjyv5npkw4grx3vq58iq2q1grf06ikivhkg8w7rvb7pqn6b"; depends=[lattice]; }; semPlot = derive2 { name="semPlot"; version="1.1"; sha256="0fzz580an7mmq6vycxbcvfdqbii0qz0nghlidb6in05j8dppsnsn"; depends=[colorspace corpcor igraph lavaan lisrelToR OpenMx plyr qgraph rockchalk sem semTools XML]; }; + semPower = derive2 { name="semPower"; version="1.0.0"; sha256="0wciz5qrd40q4mxq96pibnya11ac42n37c9xhjd4zfhznhjz06bb"; depends=[]; }; semTools = derive2 { name="semTools"; version="0.4-14"; sha256="1j1chman14i908c009lf0jgdmrrb8avgp8nif1i9wlj6vgif890c"; depends=[lavaan]; }; semdiag = derive2 { name="semdiag"; version="0.1.2"; sha256="0kjcflw7dn907zx6790w7hnf5db6bf549whfsc0c2r173kf13irp"; depends=[sem]; }; semds = derive2 { name="semds"; version="0.9-2"; sha256="0ig8b7ii1c8av0il904b71lzr8lqdiibwf16yj5dp8n4xc80bryh"; depends=[minpack_lm pracma]; }; @@ -10722,10 +10939,10 @@ in with self; { sensory = derive2 { name="sensory"; version="1.1"; sha256="1zd0ajrymxi6gygcq9fqgwgy0g6c3cqz53x0k5m0ihbmh11rc7s7"; depends=[gtools MASS Matrix]; }; senstrat = derive2 { name="senstrat"; version="1.0.3"; sha256="0j6mb55v5ivqvk8nn8fjlzrbdgj6csa58yc6gy1g07m7gk2qz2np"; depends=[BiasedUrn MASS]; }; sentimentr = derive2 { name="sentimentr"; version="2.2.3"; sha256="0f9hwiyja9cgig0ja9miqzsfwpn25bfa8xrwfm34v1n2l3v2gbxv"; depends=[data_table ggplot2 lexicon stringi syuzhet textclean textshape]; }; - sentometrics = derive2 { name="sentometrics"; version="0.2"; sha256="0pndbas1xya2pnriil94r0pp6zjd44flhsqimdgmi7w5k87wlabf"; depends=[abind caret data_table foreach ggplot2 ggthemes glmnet ISOweek MCS quanteda Rcpp RcppArmadillo RcppRoll sentimentr stringi zoo]; }; + sentometrics = derive2 { name="sentometrics"; version="0.3.5"; sha256="0628vnv3wga21z5dvhxs3alj194s43xgaasifpbfm2gmfzma6lb4"; depends=[abind caret data_table foreach ggplot2 ggthemes glmnet ISOweek MCS quanteda Rcpp RcppArmadillo RcppRoll stringi zoo]; }; seoR = derive2 { name="seoR"; version="0.1.0"; sha256="0aa74a9vi176ap4ap44sjm8lm3025dss067sm5lgc4b73a6ph75p"; depends=[digest dplyr httr igraph jsonlite RCurl readr robotstxt rvest stringr XML xml2]; }; separationplot = derive2 { name="separationplot"; version="1.1"; sha256="0qfkrk8n6jj8l7ywngwsaikfwmd9hbrpr43x0l9wkjjp1asgs5l6"; depends=[]; }; - seplyr = derive2 { name="seplyr"; version="0.5.4"; sha256="1ha3cxz5wql9bsw4japc5kj2c42mkk0g1yb141hpxpqq1c416gd1"; depends=[DBI dbplyr dplyr rlang RSQLite wrapr]; }; + seplyr = derive2 { name="seplyr"; version="0.5.5"; sha256="1hb0df1mlqv8fivdnqg5lw7gj92hscrxw122isgixkqm74n0vc5y"; depends=[dplyr rlang wrapr]; }; seqCBS = derive2 { name="seqCBS"; version="1.2"; sha256="1kywi3kvvl9y6nm7cwf6fj8gz9gzznp5va336g1akzgy77k82d8v"; depends=[clue]; }; seqDesign = derive2 { name="seqDesign"; version="1.1"; sha256="1694swd8ik9fbiflmnw4xpq82kq18rqzkw0dv5pvq30c47xjgamv"; depends=[survival xtable]; }; seqHMM = derive2 { name="seqHMM"; version="1.0.8"; sha256="1zr70ym32isav13wsb7zv4gv3bn04qi0dn5k0fqjbdcw36m5hfi8"; depends=[gridBase igraph Matrix nloptr numDeriv Rcpp RcppArmadillo TraMineR]; }; @@ -10738,13 +10955,13 @@ in with self; { seqtest = derive2 { name="seqtest"; version="0.1-0"; sha256="1bdfww9szh7h278id5xpfc39mxkcix3yvsdwc68wx3q3x0wxhqhq"; depends=[]; }; sequences = derive2 { name="sequences"; version="0.5.9"; sha256="17571m525b6a3k4f0m936wfq401181gx1fpb7x4v0fhaldzdmk3a"; depends=[Rcpp]; }; sequenza = derive2 { name="sequenza"; version="2.1.2"; sha256="0f3aj96qvbr1wqimlv6rxg0v34zlrgc6pbdy7sfkwfzs1n44q1xf"; depends=[copynumber squash]; }; - sequoia = derive2 { name="sequoia"; version="0.9.3"; sha256="1lxq88bw5fbm2afdh79fs363dvb1c2jsz02dc6c0ndwkwch04igc"; depends=[plyr]; }; + sequoia = derive2 { name="sequoia"; version="1.0.2"; sha256="1pn282s40ssprjrfh5drjr123ldlp84z3kviv6mmavrwhkp5lq5g"; depends=[plyr]; }; sergeant = derive2 { name="sergeant"; version="0.5.2"; sha256="02chkyvmwd4nimw62v82rfbid1xqw5b1335na44pdi675g904250"; depends=[DBI dbplyr dplyr htmltools httr jsonlite purrr readr scales]; }; serial = derive2 { name="serial"; version="1.3"; sha256="1ibwd8xmkd0pwdhivm6h3yd3rsi28mai5n7qcs1bq2mx8hb5lg7f"; depends=[]; }; seriation = derive2 { name="seriation"; version="1.2-3"; sha256="1q6hw4hjw224b4y0dc0j630v2pgj6sn455nwkilb70w8k31hpk92"; depends=[cluster colorspace dendextend gclus gplots MASS qap registry TSP]; }; seroincidence = derive2 { name="seroincidence"; version="1.0.5"; sha256="07lphrp7r3i87633q8g6svk2mxbsvq4blrf8gnm0p99hkmz8wgg9"; depends=[]; }; serrsBayes = derive2 { name="serrsBayes"; version="0.3-12"; sha256="137pm5s7w6fxaalyc7hzvdkg7rayjhqw2dnb2q8q9ijp0v9wx7mr"; depends=[MASS Matrix Rcpp RcppEigen truncnorm]; }; - servr = derive2 { name="servr"; version="0.8"; sha256="05pz4ychqp4cqywcdavdi8jj3y09gmam097d2idjnlcg9x61h2s9"; depends=[httpuv jsonlite mime]; }; + servr = derive2 { name="servr"; version="0.9"; sha256="0bs0i5mjfzxfshqz8i30nhn7kvgwly4fqn5bfq6dqfdrn7biai2x"; depends=[httpuv jsonlite mime xfun]; }; sesem = derive2 { name="sesem"; version="1.0.2"; sha256="0b1xzv38wpkhhlq87xrvlh45b8ksbi8bg4ar5hrf8gxa19r9rmi5"; depends=[gplots lavaan mgcv]; }; session = derive2 { name="session"; version="1.0.3"; sha256="04mcy1ac75fd33bg70c47nxqxrmqh665m9r8b1zsz5jij1sbl8q5"; depends=[]; }; sessioninfo = derive2 { name="sessioninfo"; version="1.0.0"; sha256="00g3lbvk1cjjzckl70fn5n3579qb301im4lbm3cip5c2v8k283dk"; depends=[clisymbols withr]; }; @@ -10753,11 +10970,11 @@ in with self; { setter = derive2 { name="setter"; version="0.0-1"; sha256="10fwrx8yysp99rrkbnn3rbz79vyzr2h3p7zxxlqapw1k2lllp0r5"; depends=[assertive_base]; }; settings = derive2 { name="settings"; version="0.2.4"; sha256="092sv6nccm6p2d695l9w0zfi2xgymk12c8p8lhl9nb86mxrb3nry"; depends=[]; }; severity = derive2 { name="severity"; version="2.0"; sha256="1mp19y2pn7nl9m8xfljc515kk5dirv0r2kypazpmd956lcivziqq"; depends=[]; }; - sf = derive2 { name="sf"; version="0.6-0"; sha256="0g6ghmjpxvlpi2sgvcxb6dx74pl7nc70cr8lgslrnv0fhnjr49jk"; depends=[classInt DBI magrittr pillar Rcpp units]; }; + sf = derive2 { name="sf"; version="0.6-1"; sha256="1hqsjbbasqb8vxswl7cwwjgvjiki71yb8fr301lzfxagkanys790"; depends=[classInt DBI magrittr Rcpp units]; }; sfa = derive2 { name="sfa"; version="1.0-1"; sha256="1acqxgydf8j5csdkx0yf169x3yaa31r0ccdrqarh6vj1hacm89ad"; depends=[]; }; sfadv = derive2 { name="sfadv"; version="1.0.1"; sha256="1rfpm6km5pckwhqgpvidm6qsj5sjdaqqj5b0sgvpslivfa4c80cr"; depends=[gmm minpack_lm]; }; sfc = derive2 { name="sfc"; version="0.1.0"; sha256="0cm4mfcfd9bhf2j5fppsihzrfipnldb6q3xradd88z9pwgrkfx2a"; depends=[dplyr sna tidyr triangle zoo]; }; - sfdct = derive2 { name="sfdct"; version="0.0.5"; sha256="02di504pcv423wk40ap8k18b2q759x8f5wsp8kkbwks54j42s69a"; depends=[dplyr RTriangle sf sp tibble]; }; + sfdct = derive2 { name="sfdct"; version="0.0.6"; sha256="0ilh89mfwp1yqn44yn80vz1a6g65hryk6w87ngzvak3pd6jxq6aa"; depends=[dplyr RTriangle sf sp tibble]; }; sfinx = derive2 { name="sfinx"; version="1.7.99"; sha256="14v47y00qwvc2s0vzjw19hwn85nzj8lna539c75qq6zkn6kir6va"; depends=[]; }; sfsmisc = derive2 { name="sfsmisc"; version="1.1-2"; sha256="0cgq2h11ngkzd6p34k6mqjnvlvc5vj4lnqrl64k05lb391j391w0"; depends=[]; }; sft = derive2 { name="sft"; version="2.2-0"; sha256="0d1yiimc899i09yyrv1x40ixqss87xjpy08ab16h9faxd4bsk3y2"; depends=[fda SuppDists]; }; @@ -10765,11 +10982,10 @@ in with self; { sgRSEA = derive2 { name="sgRSEA"; version="0.1"; sha256="0vyypnq81l36x0j44q2l9wbf3x4krz4fzypi7vyqhaq97mkzaw5j"; depends=[]; }; sgee = derive2 { name="sgee"; version="0.6-0"; sha256="055iydainzywb1s5id5rl9i94dj5arr9b6qz15p8wps49vm2mlp3"; depends=[copula mvtnorm]; }; sgeostat = derive2 { name="sgeostat"; version="1.0-27"; sha256="1iq9p2jk8bpv1h853a1l91d5c5dxnhkk3cmkd01siqqvj04hv4vb"; depends=[]; }; - sglOptim = derive2 { name="sglOptim"; version="1.3.6"; sha256="0gzhzfi5q9hgqgzagfdzi4cswpmwic9ggf72qi6axl1hixgmgp0w"; depends=[BH doParallel foreach Matrix Rcpp RcppArmadillo RcppProgress]; }; sglasso = derive2 { name="sglasso"; version="1.2.2"; sha256="1yk9wvg98a2l9kdaksy75av9z9iz27v5d2zpsqhabqwkwfh6wkad"; depends=[igraph Matrix]; }; - sglg = derive2 { name="sglg"; version="0.1.2"; sha256="0wqjw466j3j5ipjgp18978g7fwb2fvzxhfv2bp4dqdazmxrjyyqm"; depends=[Formula robustloggamma ssym survival]; }; + sglg = derive2 { name="sglg"; version="0.1.3"; sha256="17w9mfb53ll8aqasl4ysnb0b7sk6cgp7s1cfvn07rg5win2swqrj"; depends=[Formula robustloggamma ssym survival]; }; sglr = derive2 { name="sglr"; version="0.7"; sha256="11gjbvq51xq7xbmpziyzwqfzf4avyxj2wpiz0kp4vfdj3v7p4fp9"; depends=[ggplot2 shiny]; }; - sgmcmc = derive2 { name="sgmcmc"; version="0.2.1"; sha256="13wgc6rd6knmcw8nj12j43qqjsipxf702a4cycsnn9z7jlaxzszh"; depends=[tensorflow]; }; + sgmcmc = derive2 { name="sgmcmc"; version="0.2.2"; sha256="1ga3dynhldkl98fd7fzbbhb4bryf6nyijwvxsj8i1szy4jsv8q3q"; depends=[tensorflow]; }; sgof = derive2 { name="sgof"; version="2.3"; sha256="12bpyvg5df1m2ar6frpi10zlj3dk9h61r13rzn3w5a3nyk8gljsg"; depends=[poibin]; }; sgr = derive2 { name="sgr"; version="1.3"; sha256="0zxmrbv3fyb686hcgfy2w1w2jffxf41ab8yc90dsgf931s9c55wn"; depends=[MASS]; }; sgt = derive2 { name="sgt"; version="2.0"; sha256="0qb3maj5idwafs40fpdfrwzkadnh5yg8fvfzfs51p9yy69kbmlkx"; depends=[numDeriv optimx]; }; @@ -10785,29 +11001,30 @@ in with self; { sharpr2 = derive2 { name="sharpr2"; version="1.0.0.0"; sha256="018xzpl9h07cddpmr2bxm9iz50ky0ja12kybjil7ipjfn0kxavyr"; depends=[mvtnorm]; }; sharpshootR = derive2 { name="sharpshootR"; version="1.0"; sha256="1x9cava7b9lg8qpmjqlbkqmpc9a2dn8k4kl71s4himr4wzp9z4y3"; depends=[ape aqp circular cluster digest Hmisc igraph lattice latticeExtra plyr RColorBrewer reshape2 scales soilDB sp vegan]; }; sharx = derive2 { name="sharx"; version="1.0-5"; sha256="10sfjg6946jfk4051da0w1v89503av40wckqaabr12syf8kn0aw8"; depends=[dclone dcmle Formula]; }; - shazam = derive2 { name="shazam"; version="0.1.8"; sha256="0j953zf0wigr645a52088ajrchhr7xlf891hybbx8pvspj240f3y"; depends=[alakazam ape diptest doParallel dplyr foreach ggplot2 igraph iterators kedd KernSmooth lazyeval MASS progress scales SDMTools seqinr stringi tidyr]; }; + shazam = derive2 { name="shazam"; version="0.1.9"; sha256="1dm553l1qwqajy5p13x3ms6x45ax33zh7b79iw6xx1chbrpalhmk"; depends=[alakazam ape diptest doParallel dplyr foreach ggplot2 igraph iterators kedd KernSmooth lazyeval MASS progress scales SDMTools seqinr stringi tidyr]; }; shelltrace = derive2 { name="shelltrace"; version="3.5.1"; sha256="1xgbavaa26185i6q3907ds3bzq4xrw027x1sw5vsybqrxdz04jiz"; depends=[bmp tiff xlsx]; }; shiftR = derive2 { name="shiftR"; version="1.4"; sha256="12mb4b5zhiq7hfkpc9hgi004hqli1kkkzdy2169svwrjv7bfifrn"; depends=[]; }; shiny = derive2 { name="shiny"; version="1.0.5"; sha256="0hps6nlyffh685smsm9sd0rdmip0y8v7hgv6a4hqlq7kf8zmzqi0"; depends=[digest htmltools httpuv jsonlite mime R6 sourcetools xtable]; }; - shiny_semantic = derive2 { name="shiny.semantic"; version="0.1.1"; sha256="0jd00z817cccz3wfhcmz61wsy5fjw6yyan2ywkf06xqcdpnr8iwh"; depends=[htmltools htmlwidgets purrr shiny]; }; + shiny_semantic = derive2 { name="shiny.semantic"; version="0.1.2"; sha256="0zvd37z4d2vx2h2ypmbzbaxa617dpwdzhp3rwd6yak0avfv5h7a0"; depends=[htmltools htmlwidgets jsonlite magrittr purrr shiny]; }; shinyAce = derive2 { name="shinyAce"; version="0.2.1"; sha256="0ycka8rsw0178q9klfid97vdn5cbyx3r778nis5s3dqipdyazdm9"; depends=[shiny]; }; shinyBS = derive2 { name="shinyBS"; version="0.61"; sha256="0rhim4mbp4x9vvm7xkmpl7mhb9qd1gr96cr4dv330v863ra2kgji"; depends=[htmltools shiny]; }; shinyDND = derive2 { name="shinyDND"; version="0.1.0"; sha256="0nkvz4hmjzmxlzj4vkjrdy8xlbxapg1amk180irgvwicqldi4jpm"; depends=[htmltools shiny]; }; - shinyFeedback = derive2 { name="shinyFeedback"; version="0.0.3"; sha256="1ikxwa02jpkir1xxx4lvz995ggx8032vl0zknmhccb2mn1k98b4i"; depends=[digest shiny]; }; + shinyFeedback = derive2 { name="shinyFeedback"; version="0.0.4"; sha256="14lvr99nfldlr101ysmpwz0zw0bjvr6b7lfm0msx57ymh6gjzg3n"; depends=[digest shiny]; }; shinyFiles = derive2 { name="shinyFiles"; version="0.6.2"; sha256="1lphzqbzg482lv0xiamfv28n5nyjppss9zzcpx1cd5fsz0xg1282"; depends=[htmltools RJSONIO shiny]; }; shinyHeatmaply = derive2 { name="shinyHeatmaply"; version="0.1.0"; sha256="1vl80vp7yslnh0dvcrpysfn5rndjavphy31y15546q7ax7d0fn6v"; depends=[dplyr DT heatmaply htmltools htmlwidgets jsonlite plotly RColorBrewer readxl shiny viridis xtable]; }; shinyKGode = derive2 { name="shinyKGode"; version="1.0.5"; sha256="004zwz4kqfijzvvwkq8v1gi25w1wrdlg8230g93w36gbi6cl2vk1"; depends=[ggplot2 gridExtra KGode mvtnorm pracma pspline reshape2 shiny shinyjs XML]; }; - shinyLP = derive2 { name="shinyLP"; version="1.1.0"; sha256="08vc35988pv0kx0kvdl26nkdzcgmi6w4xffmyylan7x59519imkk"; depends=[shiny shinyBS shinythemes]; }; + shinyLP = derive2 { name="shinyLP"; version="1.1.1"; sha256="099ca86wvjfi3ld6fnvxk65rnxr5yji28il2f9xhacmhksn3db3l"; depends=[shiny]; }; shinyRGL = derive2 { name="shinyRGL"; version="0.1.0"; sha256="07llg1yg5vmsp89jk60ly695zvxky6n06ar77mjxzlyc294akwmy"; depends=[rgl shiny]; }; shinyShortcut = derive2 { name="shinyShortcut"; version="0.1.0"; sha256="101wz9s4rk7fbaqgm0r2v3v8za20vdxwq4vhkz8xr7y5pr65sxiq"; depends=[]; }; shinyTime = derive2 { name="shinyTime"; version="0.2.1"; sha256="0gpa6kypchvvlq71nnlilciclcrhaa488prjz46sddrsxjy09mp7"; depends=[htmltools shiny]; }; shinyTree = derive2 { name="shinyTree"; version="0.2.2"; sha256="08n2s6pppbxn23ijp6vms609p4qwlmfh9g0k5hdfqsqxjrz1nndi"; depends=[shiny]; }; - shinyWidgets = derive2 { name="shinyWidgets"; version="0.4.1"; sha256="11qwwz4il4n8ha587bc32n1z5pnhw4vv2ffxl9cc1i431k01p7yc"; depends=[htmltools jsonlite shiny]; }; + shinyWidgets = derive2 { name="shinyWidgets"; version="0.4.2"; sha256="0y23p9wirrp3d9zb8cfdizsg8ijgm2sxhvhfl06yq8i1wnr8yif5"; depends=[htmltools jsonlite shiny]; }; shinyaframe = derive2 { name="shinyaframe"; version="1.0.1"; sha256="1flhgsm4q7p5acb41v73pf8ni92y9dwdppxjb9czlz1sxwf03p1s"; depends=[htmltools htmlwidgets shiny]; }; shinyalert = derive2 { name="shinyalert"; version="1.0"; sha256="0ngmpbzw6fw1gs6sv9m3xv2c9bmrxg0bs6lnvxn8hm8cwr4440xi"; depends=[digest shiny]; }; shinybootstrap2 = derive2 { name="shinybootstrap2"; version="0.2.1"; sha256="17634l3swlvgj1sv56nvrpgd6rqv7y7qjq0gygljbrgpwmfj198c"; depends=[htmltools jsonlite shiny]; }; shinycssloaders = derive2 { name="shinycssloaders"; version="0.2.0"; sha256="1bpzsm7m7c366sjl1qndp4m5dg2vlm68rjgdy9n1ija9xbp0r2g4"; depends=[digest glue shiny]; }; - shinydashboard = derive2 { name="shinydashboard"; version="0.6.1"; sha256="14zi7g5wrngy6lwi9xpvaid7727m6rfdijbb89al9likfhjqzqqy"; depends=[htmltools shiny]; }; + shinycustomloader = derive2 { name="shinycustomloader"; version="0.9.0"; sha256="1klx71vr26g0gjf6hbiia1qidqii5d467i1sdjvlrg1hxdcggqff"; depends=[glue shiny]; }; + shinydashboard = derive2 { name="shinydashboard"; version="0.7.0"; sha256="10yqcqqcxgfqwkmscqwvvgr710im583qsqnsqkfpisjvkqp10yqb"; depends=[htmltools shiny]; }; shinyjqui = derive2 { name="shinyjqui"; version="0.2.0"; sha256="07ijd5psywlkfrz54d4q68bwij1as4ai0360fya8ikngkwg393mj"; depends=[htmlwidgets jsonlite shiny]; }; shinyjs = derive2 { name="shinyjs"; version="1.0"; sha256="113zpijri0l80rlgrvqn6bxk0sdqgl79h7yhja2p76f9dc9i2sr8"; depends=[digest htmltools jsonlite shiny]; }; shinymaterial = derive2 { name="shinymaterial"; version="0.5.2"; sha256="1xdvk8icnzc156bdn6782qgj1dgzc8v22b8qhfnxabxxgpap5nm9"; depends=[shiny]; }; @@ -10820,9 +11037,10 @@ in with self; { showimage = derive2 { name="showimage"; version="1.0.0"; sha256="1c0x3iqjdjsz3cdhc02b3qm2pwxjr1q2k87jwvxj9lnzzw81f1pl"; depends=[png]; }; showtext = derive2 { name="showtext"; version="0.5-1"; sha256="0zb9h6frw580cql0nbkvfb0jajq6k4yhqaifvz8cpysd32dk35wm"; depends=[showtextdb sysfonts]; }; showtextdb = derive2 { name="showtextdb"; version="2.0"; sha256="1qwwj9x2jvadvwn60h75k99c9xi7yhqjsgaakahz5paxgj583bsh"; depends=[sysfonts]; }; - shp2graph = derive2 { name="shp2graph"; version="0-3"; sha256="0mfb3f64kpd23qa1yb19j7j234snls7yvszp2yxnv9yahk0blifw"; depends=[igraph maptools sp]; }; + shp2graph = derive2 { name="shp2graph"; version="0-4"; sha256="13hpj2yjai3yf8q6dnhpdqzsw4nkdpi06fxxdgn82ycx0sp7zk4v"; depends=[igraph maptools sp]; }; shrink = derive2 { name="shrink"; version="1.2.1"; sha256="0pd967wsys8fd7gyvr9y08km118yamfk5c1a1i2k8nr2ifpqmy0w"; depends=[MASS mfp rms survival]; }; shuffle = derive2 { name="shuffle"; version="1.0.1"; sha256="0aqb11h340picx7z2jg3k46l3pr6fkknlpyzc0z89hhrc90pss48"; depends=[]; }; + shuffleCI = derive2 { name="shuffleCI"; version="0.1.0"; sha256="1n9k28m1fcnw1my9a7v0gy9waygd48lab45vj9k2wwijbc325zai"; depends=[plotrix]; }; siRSM = derive2 { name="siRSM"; version="1.1"; sha256="0fx6bfb5c8hdlgjxddwhhzr09ls53kfgn36hjk9zi5z8m14a7wbn"; depends=[doSNOW foreach MASS rsm]; }; siar = derive2 { name="siar"; version="4.2"; sha256="1c4z72jr81dzkp9xqyrrkwjsalvvksl67pnbaadkc52v84fhzx3r"; depends=[bayesm coda hdrcde MASS mnormt spatstat]; }; sicegar = derive2 { name="sicegar"; version="0.2.2"; sha256="0fnr0wv8zbhs2i5y1kqyvhm0kzisc68ys3iy0wxwbdj3bnfgzj70"; depends=[dplyr fBasics ggplot2 minpack_lm]; }; @@ -10831,7 +11049,7 @@ in with self; { sidrar = derive2 { name="sidrar"; version="0.2.4"; sha256="1zwxafc4xaa4386a9jdg3gwflpdxql3f33bkqx1l2yl30x3517rw"; depends=[dplyr magrittr RCurl rjson rvest stringr tidyr xml2]; }; sievetest = derive2 { name="sievetest"; version="1.2.2"; sha256="0mbgkf014m6bc7qg60vf065i6mvl5n4a0bvg8vb7dw531vsw2771"; depends=[]; }; sig = derive2 { name="sig"; version="0.0-5"; sha256="084wwpj5mnmq4k98ijbv23z80sj4axadc7c6hn3917dazsaa6ngn"; depends=[]; }; - sigQC = derive2 { name="sigQC"; version="0.1.12"; sha256="1m7vywpmrwlldgdg9d8vjlfxkdnhcaz3w5vbkyljd9qfsqbwaipz"; depends=[biclust class cluster ComplexHeatmap fmsb gplots gridGraphics KernSmooth lattice MASS mclust moments nnet RankProd]; }; + sigQC = derive2 { name="sigQC"; version="0.1.14"; sha256="17vgfpkbn8g3bgfxmy5wvpjkzizpzqjw5xijmzpi627ba9g8lrwh"; depends=[biclust class cluster ComplexHeatmap fmsb gplots gridGraphics KernSmooth lattice MASS mclust moments nnet RankProd]; }; sigclust = derive2 { name="sigclust"; version="1.1.0"; sha256="0151v7lr4n4yyn93j0s06gzc9jh9xhdgvfw6kvpfy24jl6wdii7g"; depends=[]; }; sigloc = derive2 { name="sigloc"; version="0.0.4"; sha256="13v2dlgsbcsqqm8yxls62i7r3sk8m3c78jv8f9lgdihq5pjnd9zp"; depends=[ellipse nleqslv]; }; sigmaNet = derive2 { name="sigmaNet"; version="1.0.3"; sha256="0b9p5kgcbpzb83s0vgmfwmh15lvsfz5q0yk5wl16rxyiqqg2nxag"; depends=[htmlwidgets igraph jsonlite RColorBrewer]; }; @@ -10840,7 +11058,7 @@ in with self; { signalHsmm = derive2 { name="signalHsmm"; version="1.4"; sha256="1plyvx0pdid4zydxjwph6v96c8ilzgn55vcdszkslp3a4s2sns65"; depends=[Rcpp seqinr shiny]; }; signmedian_test = derive2 { name="signmedian.test"; version="1.5.1"; sha256="05n7a4h2bibv2r64cqschzhjnm204m2lm1yrwxvx17cwdp847hkm"; depends=[]; }; sigora = derive2 { name="sigora"; version="2.0.1"; sha256="1sgjafr2f7carwnvp0vsvp80jn2bzwlkay38ch63qk9gapsh4imh"; depends=[]; }; - sigr = derive2 { name="sigr"; version="0.2.3"; sha256="1kyj8xizswwg5agv4ac296pqvxxq3kla537z10qvg16ilskbqny5"; depends=[pwr]; }; + sigr = derive2 { name="sigr"; version="0.2.4"; sha256="11dxv99yibp6cj3jg8qmy8r4csr2lyww6zrdy4a2zgmrzl02fhlc"; depends=[pwr]; }; siland = derive2 { name="siland"; version="1.0"; sha256="0zqwslg0vak22q475azwank81wr4kfx33h21w84lsg7iihrb08nv"; depends=[lme4 raster rgdal sp]; }; sim1000G = derive2 { name="sim1000G"; version="1.39"; sha256="1qxl7lsdsd4skn6x8iw7jx60ly0rwsj27yh5yiqmhxa34jpyjg0m"; depends=[hapsim MASS readr stringr]; }; simEd = derive2 { name="simEd"; version="1.0.3"; sha256="1yq0qblrz0zddx682rzwdaa0k0r223i123la7wbp73spnn38g4br"; depends=[rstream]; }; @@ -10850,9 +11068,9 @@ in with self; { simMSM = derive2 { name="simMSM"; version="1.1.41"; sha256="04icijrdc269b4hwbdl3qz2lyxcxx6z63y2wbak1884spn6bzbs8"; depends=[mvna survival]; }; simPATHy = derive2 { name="simPATHy"; version="0.2"; sha256="0ai5wmjz8k0glbwkclgg3m3ncsjghja4iys2mn1psn3r8gxk79yc"; depends=[ggm graph gRbase htmlwidgets igraph mvtnorm qpgraph R_utils shiny shinydashboard]; }; simPH = derive2 { name="simPH"; version="1.3.10"; sha256="0br32m28ynmhr4xal69bsv925rlmih898rk5bskn1s6bhsshalqq"; depends=[data_table dplyr ggplot2 gridExtra lazyeval MASS mgcv quadprog stringr survival]; }; - simPop = derive2 { name="simPop"; version="1.0.0"; sha256="1197gfpikrb02s7jgvpxzp19bbjdpzsik8ngh77k2fa76gzs4p6c"; depends=[colorspace data_table doParallel e1071 EnvStats fitdistrplus foreach laeken lattice MASS nnet party plyr ranger Rcpp vcd VIM]; }; + simPop = derive2 { name="simPop"; version="1.1.0"; sha256="0zaf12lzca73nn0jy1gikzzwrsg046sgsfn9ck65jzdwh9xj9020"; depends=[colorspace data_table doParallel e1071 EnvStats fitdistrplus foreach laeken lattice MASS nnet party plyr ranger Rcpp RcppArmadillo vcd VIM wrswoR]; }; simSummary = derive2 { name="simSummary"; version="0.1.0"; sha256="1ay2aq6ajf1rf6d0ag3qghxpwj0f8b3fhpr2k0imzmpbyag1i3gj"; depends=[abind gdata svUnit]; }; - simTool = derive2 { name="simTool"; version="1.0.3"; sha256="1x018p5mssrhz2ghs3ly9wss12503h93gl7zk0mqh1bcrzximh0k"; depends=[plyr reshape]; }; + simTool = derive2 { name="simTool"; version="1.1.0"; sha256="121nv0s14jzxgcmj2fsj1k0msziknwbix2a49f7igic2l8yv869p"; depends=[dplyr plyr purrr reshape tibble tidyr]; }; simba = derive2 { name="simba"; version="0.3-5"; sha256="14kqxqavacckl5s1518iiwzrmlgbxz1lxy33y8c9qq7xaln41g9h"; depends=[vegan]; }; simboot = derive2 { name="simboot"; version="0.2-6"; sha256="0bgibrqb9j62p1chldi1lvdsgc6sgsr7afyq4lvyrc2h861f3j9d"; depends=[boot mvtnorm]; }; simcausal = derive2 { name="simcausal"; version="0.5.4"; sha256="19mqabxqz2mvfhslbln5vsnlrnmgcfmgp7ypf5k2yd03755b0k4b"; depends=[assertthat data_table igraph Matrix R6 stringr]; }; @@ -10888,7 +11106,7 @@ in with self; { sinib = derive2 { name="sinib"; version="1.0.0"; sha256="08x2a5hn41vcsai3r36w1kgzka4ks53pkp6dxn90bsqh40ydb0db"; depends=[]; }; siplab = derive2 { name="siplab"; version="1.2"; sha256="0r7gk9qsmbc3ln67cb8p87bq3s2rx6fbavlly1fpzqqv2isf5pq9"; depends=[spatstat]; }; sirad = derive2 { name="sirad"; version="2.3-3"; sha256="0vhmk2fmq4797gj6c8803zw1ipmdxfvdfgi2bygzxbn5bqd4da2n"; depends=[raster zoo]; }; - sirt = derive2 { name="sirt"; version="2.4-20"; sha256="0kgy5jv6yz6hlx4c8mbb4fgqfb8ihslmaxqxlr8qpqh79fvgv2q6"; depends=[CDM coda lavaan lavaan_survey mirt mvtnorm Rcpp RcppArmadillo sfsmisc survey TAM]; }; + sirt = derive2 { name="sirt"; version="2.6-9"; sha256="06iz4dxlsxdfgmn52pyiyng0bbxffc5b7sszwbzq5i64ad1j0d48"; depends=[CDM coda lavaan lavaan_survey MASS mirt mvtnorm Rcpp RcppArmadillo sfsmisc survey TAM]; }; sisVIVE = derive2 { name="sisVIVE"; version="1.4"; sha256="1vh53irxgk8ahw52cdqbbm89dvmzyf54izg4lm8a3v92k5p6nzwz"; depends=[lars]; }; sisal = derive2 { name="sisal"; version="0.46"; sha256="00szc3l69i0cksxmd0lyrs4p6plf05sl4vxs3nl4gkbja5y4lvpc"; depends=[boot digest lattice mgcv R_matlab R_methodsS3]; }; sisus = derive2 { name="sisus"; version="3.9-13"; sha256="0lz9ww07dvdx6l3k5san8gwq09hycc3mqwpgzmr2ya9z8y27zadr"; depends=[coda gdata gtools MASS moments polyapost rcdd RColorBrewer]; }; @@ -10902,18 +11120,18 @@ in with self; { sjPlot = derive2 { name="sjPlot"; version="2.4.1"; sha256="0aazxrqsbp5jsd5yfm6hrx17rmlqbh5vs314xms7g620aj383zrh"; depends=[arm broom dplyr effects forcats ggeffects ggplot2 glmmTMB knitr lme4 magrittr MASS merTools modelr nlme psych purrr rlang scales sjlabelled sjmisc sjstats tibble tidyr tidyselect]; }; sjdbc = derive2 { name="sjdbc"; version="1.6.0"; sha256="17ncgj2s2pjn3w3c1dgxv8g7y17h4p78iic86gsj2ahn0xpsmkcc"; depends=[rJava]; }; sjlabelled = derive2 { name="sjlabelled"; version="1.0.8"; sha256="1hhcv5d5jbrd9wv9hdvck40wdpr4nr6hr972ng5w2wbh7bikvgqg"; depends=[broom dplyr haven magrittr prediction purrr rlang snakecase tibble]; }; - sjmisc = derive2 { name="sjmisc"; version="2.7.0"; sha256="1bni8ppvabzjx94hd8ygp14n2g6a8qhjvnimm0v7pqbf7czmpapy"; depends=[broom cli crayon dplyr haven magrittr pillar psych purrr rlang sjlabelled stringdist stringr tibble tidyr tidyselect]; }; - sjstats = derive2 { name="sjstats"; version="0.14.1"; sha256="10siniyy1nqsacayyl7p35yc9gmdh5rjlwzv8aywid2a1ld13lfs"; depends=[bayesplot broom cli coin crayon dplyr emmeans glmmTMB lme4 lmtest magrittr MASS Matrix modelr nlme prediction purrr pwr rlang sandwich sjlabelled sjmisc tibble tidyr tidyselect]; }; + sjmisc = derive2 { name="sjmisc"; version="2.7.1"; sha256="0vj0b3vn3mkqw23x2rnrn468db44x6wvphbqlap5n7c7dzg8hg22"; depends=[broom cli crayon dplyr haven magrittr pillar psych purrr rlang sjlabelled stringdist stringr tibble tidyr tidyselect]; }; + sjstats = derive2 { name="sjstats"; version="0.14.2-3"; sha256="0wqnyf1wpbq0av3027x455jcha7w8kg9lb62rjm5fkz52ff93hpx"; depends=[bayesplot broom coin crayon dplyr emmeans glmmTMB lme4 lmtest magrittr MASS Matrix modelr nlme prediction purrr pwr rlang sandwich sjlabelled sjmisc tibble tidyr tidyselect]; }; skda = derive2 { name="skda"; version="0.1"; sha256="0a6mksr1d0j3pd0kz4jb6yh466gvl4fkrvgvnlmvivpv6b2gqs3q"; depends=[]; }; skeleSim = derive2 { name="skeleSim"; version="0.9.8"; sha256="1wxdl30cy8vr1cd0wcjxyklp6crw4bv8r77ma2dkzmxm2ma5jw92"; depends=[adegenet ape hierfstat igraph markdown pegas reshape2 rmetasim shiny shinyFiles strataG swfscMisc]; }; skeletor = derive2 { name="skeletor"; version="1.0.4"; sha256="1jfbfbkjx8mdwamsrkhvcnyn470in702vgcyw3g2dbgs84gl29q8"; depends=[]; }; skellam = derive2 { name="skellam"; version="0.2.0"; sha256="0r5wbs5h7xc3k2vjxd4axwnxr9cmwm008fcyj1vyixkg8fa680gx"; depends=[]; }; skewt = derive2 { name="skewt"; version="0.1"; sha256="1xm00zfzjv53cq9drfcx7w2ri5dwsq7kajrk2hc1mvw0b6s4x2ix"; depends=[]; }; - skimr = derive2 { name="skimr"; version="1.0.1"; sha256="173ymwkx7n24xj70azdwlpiyswdfy17mw2dhpqcm6ssv0crnjjcc"; depends=[dplyr knitr magrittr pander purrr rlang stringr tibble tidyr tidyselect]; }; + skimr = derive2 { name="skimr"; version="1.0.2"; sha256="1grm4z4avl6qp9ssk3cwg20wgqzk9w61p2hjwhld6p78r971k07a"; depends=[dplyr knitr magrittr pander purrr rlang stringr tibble tidyr tidyselect]; }; skm = derive2 { name="skm"; version="0.1.5.4"; sha256="06g3bdncq2r56d8k3dr87gqnibypbsps0gj4jxkw9q1sq1yaff3v"; depends=[data_table magrittr plyr Rcpp RcppArmadillo RcppParallel]; }; skmeans = derive2 { name="skmeans"; version="0.2-11"; sha256="1a8nwlym6pf0z13nnw1id2wls9lq788860yhjaqd56c3slzfsymn"; depends=[clue cluster slam]; }; - skpr = derive2 { name="skpr"; version="0.45.2"; sha256="1wi19rz9mhim91pqdzljjscpsv2dbm838jjbv9ynmscjnfcbbfl6"; depends=[doParallel foreach iterators kableExtra knitr lme4 nlme Rcpp RcppArmadillo rintrojs shiny shinythemes survival]; }; - skynet = derive2 { name="skynet"; version="1.0"; sha256="00i3gvl9hz72id449wph8f0gncps6gzj0yz4n34ys8ih0j8n8b81"; depends=[data_table dplyr ggplot2 ggrepel igraph maps stringr]; }; + skpr = derive2 { name="skpr"; version="0.47.5"; sha256="1c9ikn3lj3w2a4p1m8gdmhc1xzavf3y8zwra7lcb1snw9pznj7s8"; depends=[doParallel doRNG foreach iterators kableExtra knitr lme4 nlme Rcpp RcppArmadillo rintrojs shiny shinythemes survival]; }; + skynet = derive2 { name="skynet"; version="1.0.1"; sha256="1jcb7m4warpg0c8x83dzm107qb5i0zakvjx4a1c6rr814c7xrlhl"; depends=[data_table dplyr ggplot2 ggrepel igraph maps stringr]; }; skyscapeR = derive2 { name="skyscapeR"; version="0.2.2"; sha256="08h3vvn9zglw3xrl0xpyj95r1n3v6lk835a4nbanxdvi21mgpi77"; depends=[astrolibR doParallel foreach MESS numDeriv oce plotrix png pracma RColorBrewer rootSolve]; }; sla = derive2 { name="sla"; version="0.1"; sha256="0fr5n65ppwsh9z7a6rma9ak0bl8x3nz7v25lij7wb5nrf3sl74yb"; depends=[]; }; slackr = derive2 { name="slackr"; version="1.4.2"; sha256="1vm2h5fzcss3xx1annx68wrvv6c0s6h2ci0bipxmdl9amdaqw85w"; depends=[dplyr ggplot2 httr jsonlite]; }; @@ -10929,13 +11147,14 @@ in with self; { sm = derive2 { name="sm"; version="2.2-5.4"; sha256="0hnq5s2fv94gaj0nyqc1vjdjd64vsp9z23nqa8hxvjcaf996rwj9"; depends=[]; }; smaa = derive2 { name="smaa"; version="0.2-5"; sha256="1mwahjgslk82f8bl6qcjs1yadhbnqrxxhvkffkgc2fv3s6lh5d9m"; depends=[]; }; smac = derive2 { name="smac"; version="1.0"; sha256="1inn7i5k0q5vln24kazh3gl3szf6lxwnjr2rw70jcyn9dr9iy952"; depends=[]; }; - smacof = derive2 { name="smacof"; version="1.9-6"; sha256="19x11011w8kwdbd0jp7y7zqhmn0a5bhc9gh7jkcpxij8ppiigh8y"; depends=[candisc colorspace ellipse Hmisc MASS nnls plotrix polynom weights wordcloud]; }; + smacof = derive2 { name="smacof"; version="1.10-5"; sha256="102b63b5zyjv0fsmp3in98ckacsgjvpzmv3fwbchdrvf1262aia2"; depends=[candisc colorspace ellipse Hmisc MASS nnls plotrix polynom weights wordcloud]; }; smacpod = derive2 { name="smacpod"; version="2.0"; sha256="05bylhh98qlnq4gn0wwg3wb3pwa1q2kh06v2skj2fgbjgr03fhkn"; depends=[abind pbapply plotrix sp SpatialTools spatstat]; }; smallarea = derive2 { name="smallarea"; version="0.1"; sha256="0jcv0xbh8v4g6zxxs4yyd0divwzk9d2w7g01r4s65khxvy3av7yx"; depends=[MASS]; }; smam = derive2 { name="smam"; version="0.3-0"; sha256="1sdr0ki2y9smiwfglgh97kj6y0n1z3blyyxk823xp3467byk1rnb"; depends=[Matrix numDeriv Rcpp]; }; smapr = derive2 { name="smapr"; version="0.1.1"; sha256="0ci0j26nsgl4yi0b0bhxqgpn281ml5clhih2nl7hm5l8nybdyp3q"; depends=[httr rappdirs raster rhdf5 rvest xml2]; }; smart = derive2 { name="smart"; version="1.0.1"; sha256="0ki3qn71zrw0nyv395qijcwahnxyv1p21j8x6cxr9spah2wzz8lb"; depends=[elasticnet gplots gtools igraph Matrix pcaPP PMA]; }; - smatr = derive2 { name="smatr"; version="3.4-3"; sha256="0iiazln4albj7k5w67slvyn98cqg4f6k409mml0n1pvlkki0h7gy"; depends=[plyr]; }; + smartsizer = derive2 { name="smartsizer"; version="1.0.0"; sha256="0lp7qykb6y93aw5w7nbpb4d2vpz6by6zv8j7safhixx4wczlc39k"; depends=[MASS]; }; + smatr = derive2 { name="smatr"; version="3.4-8"; sha256="0qqqbg65flxh48sw7x90zvgzbpcfzb1811h0pz3zlhdw9a7khs9n"; depends=[]; }; smbinning = derive2 { name="smbinning"; version="0.6"; sha256="13izdq2pl7hi8ppzmpmiiz4pmc43m63ixjrbj9lwa371vx60ndmh"; depends=[Formula gsubfn partykit sqldf]; }; smcUtils = derive2 { name="smcUtils"; version="0.2.2"; sha256="0d1kmg386j0zrpp8vgxjwvpf1i25l86xrh82767xkp0n9qj8srwq"; depends=[]; }; smcfcs = derive2 { name="smcfcs"; version="1.3.0"; sha256="1860qzhfpdr78a8ha8537izbkm0dx9j63l9fv6mswcs5sjl25i09"; depends=[MASS survival VGAM]; }; @@ -10945,7 +11164,7 @@ in with self; { smdc = derive2 { name="smdc"; version="0.0.2"; sha256="1j6xnzjbmmakbmk3lyjck3bsy8w8hyd9d8h04s4gbddhci283mqm"; depends=[proxy tm]; }; smds = derive2 { name="smds"; version="1.0"; sha256="0aqf3wfn6mlsl8a32gaf9qdpyxwsx19g6mma8qzgaysdmk6vhbpd"; depends=[MASS]; }; sme = derive2 { name="sme"; version="1.0.2"; sha256="0gszpy1sx2qsypps3iza79sab475wcrscl7wnbbrv97a3ry0ybp6"; depends=[lattice]; }; - smerc = derive2 { name="smerc"; version="0.2.2"; sha256="0x1n1plnq63grs09cijhy265xqrfg9az1pp9n5dg5wqlj6gf9rzi"; depends=[fields igraph maps smacpod SpatialTools spdep]; }; + smerc = derive2 { name="smerc"; version="0.4.5"; sha256="1455fjfihznzivz80jad7pyfjms8yyvmsz6wqdvqv3n6dsyr8fvb"; depends=[fields maps matrixStats smacpod sp SpatialTools spdep]; }; smfsb = derive2 { name="smfsb"; version="1.1"; sha256="0khd23b6k9zgxz2x6g6c6k2g32mbpli32izdq6fgk1a990kdsp6j"; depends=[]; }; smirnov = derive2 { name="smirnov"; version="1.0-1"; sha256="09mpb45wj8rfi6n6822h4c335xp2pl0xsyxgin1bkfw97yjcvrgk"; depends=[]; }; smnet = derive2 { name="smnet"; version="2.1.1"; sha256="0fa47zgm7jxvs3jfai54wsc6qa9ycqw4f3yr941fvkczwzh4ch02"; depends=[DBI RSQLite spam SSN]; }; @@ -10957,6 +11176,7 @@ in with self; { smoother = derive2 { name="smoother"; version="1.1"; sha256="0nqr1bvlr5bnasqg74zmknjjl4x28kla9h5cxpga3kq5z215pdci"; depends=[TTR]; }; smoothie = derive2 { name="smoothie"; version="1.0-1"; sha256="12p4ig8fbmlsby5jjd3d27njv8j7aiwx0m2n1nmgvjj0n330s1kj"; depends=[]; }; smoothmest = derive2 { name="smoothmest"; version="0.1-2"; sha256="14cri1b6ha8w4h8m26b3d7qip211wfv1sywgdxw3a6vqgc65hmk5"; depends=[MASS]; }; + smoothr = derive2 { name="smoothr"; version="0.1.0"; sha256="19ylhy7jz445yafdxlygs91vl4vrnnhggc2grwap0dcz0cazik1d"; depends=[sf units]; }; smoothtail = derive2 { name="smoothtail"; version="2.0.5"; sha256="1sqkwniz9m03k23nba9ndmdm0g03mdshzm8risr6wz98jcqjilrk"; depends=[logcondens]; }; smotefamily = derive2 { name="smotefamily"; version="1.2"; sha256="166gqwqljips2r0030m3q44zmxlnxcpb9hmwbg1bk3dqk9gfl8ra"; depends=[]; }; smovie = derive2 { name="smovie"; version="1.0.0"; sha256="07sf9nxanfkcp42bv4x12vrlsdr2nnyfgdm6bhcfpggavd4s8r9q"; depends=[revdbayes rpanel SuppDists]; }; @@ -10965,7 +11185,7 @@ in with self; { smss = derive2 { name="smss"; version="1.0-2"; sha256="04lgfdcvnzpnpplyl62fy7slyiy8wkqpjjrzmclgqis3c9zkkncp"; depends=[]; }; sn = derive2 { name="sn"; version="1.5-1"; sha256="0l7qlah6dwkp8jswnr2mn3phlm15naba5zkmv0g5pcqy5ix0gz7w"; depends=[mnormt numDeriv]; }; sna = derive2 { name="sna"; version="2.4"; sha256="1ks8819qvpdfansfqj9p32s1rhvl26frvbi78m4rx1wd1qcv74i2"; depends=[network statnet_common]; }; - snakecase = derive2 { name="snakecase"; version="0.9.0"; sha256="02s3avsdvdmqfrwlliw90yza8rq2wlf56iwpvj36a2qkzxg54b6a"; depends=[stringi stringr]; }; + snakecase = derive2 { name="snakecase"; version="0.9.1"; sha256="02462vd08asm4ah2brrc3z2s1lqcya80shrd6w743cylv3h3hpyv"; depends=[stringi stringr]; }; snappier = derive2 { name="snappier"; version="0.1.0"; sha256="0334zwhqdl3lfw7rg8ql7z10qj8jjrm17yi9mgdcxnzaf3f1p859"; depends=[]; }; snapshot = derive2 { name="snapshot"; version="0.1.2"; sha256="0cif1ybxxjpyp3spnh98qpyw1i5sgi1jlafcbcldbqhsdzfz4q10"; depends=[]; }; snht = derive2 { name="snht"; version="1.0.5"; sha256="0k8w1118b2qrf5zfi902gm6zf7b1mwv7py7wg57vsibh2r2ra8ah"; depends=[ggplot2 gridExtra mgcv plyr reshape2 zoo]; }; @@ -10980,7 +11200,7 @@ in with self; { snp_plotter = derive2 { name="snp.plotter"; version="0.5.1"; sha256="16apsqvkah5l0d5qcwp3lq2jspkb6n62wzr0wskmj84jblx483vv"; depends=[genetics]; }; snpEnrichment = derive2 { name="snpEnrichment"; version="1.7.0"; sha256="1lja1n26nr8lgbca2kraryv933jwa2w3h41appzylflf0w3liz9y"; depends=[ggplot2 snpStats]; }; snpRF = derive2 { name="snpRF"; version="0.4"; sha256="1amxc4jprrc6n5w5h9jm2as025gqdqkla2asz7x97sjdnnj9kzzn"; depends=[]; }; - snpReady = derive2 { name="snpReady"; version="0.9.4"; sha256="16nfwjda15gjk0y1rvvnlbx350rgdvpk397glp7yl2ji0amwv20r"; depends=[Matrix matrixcalc stringr]; }; + snpReady = derive2 { name="snpReady"; version="0.9.6"; sha256="1r96j8zh84dn7qh3zgl0p0v3a80hx2wd3c4jgjlr43hzl7yglpqr"; depends=[impute Matrix matrixcalc rgl stringr]; }; snpStatsWriter = derive2 { name="snpStatsWriter"; version="1.5-6"; sha256="04qhng888yih8gc7yd6rrxvvqf98x3c2xxz22gkwqx59waqd4jlq"; depends=[colorspace snpStats]; }; snpar = derive2 { name="snpar"; version="1.0"; sha256="0c9myg748jm7khqs8yhg2glxgar1wcf6gyg0xwbmw0qc41myzfnq"; depends=[]; }; snplist = derive2 { name="snplist"; version="0.18.1"; sha256="14x31h8h3lx25rm30vhp89byrzy3qrmawi07pmzy4xpxdf0rxm4s"; depends=[biomaRt DBI R_utils Rcpp RSQLite]; }; @@ -11002,19 +11222,20 @@ in with self; { soilprofile = derive2 { name="soilprofile"; version="1.0"; sha256="0sdfg6m2m6rb11hj017jx2lzcgk6llb01994x749s0qhzxmvx9mb"; depends=[aqp lattice munsell splancs]; }; soiltexture = derive2 { name="soiltexture"; version="1.4.5"; sha256="0a9n89ygfqpm6sir76ginri1l6gmw3gfd58szl4ikzaz8fk5hxqh"; depends=[MASS sp]; }; soilwater = derive2 { name="soilwater"; version="1.0.5"; sha256="11gal7hj73j82qx65krmzpmf0gpm41ph8hw70df46dbf4w23vvjn"; depends=[]; }; + sokoban = derive2 { name="sokoban"; version="0.1.0"; sha256="07r2zv9rynvw06fpncrz3rsmkdy6z2pcvmm559bhs428kmnq2xib"; depends=[]; }; solaR = derive2 { name="solaR"; version="0.44"; sha256="1waxi2zfns4dh1vpsl3khbgaw07icp4f1ax9l0pry9qipmk0nk3k"; depends=[lattice latticeExtra RColorBrewer zoo]; }; solarPos = derive2 { name="solarPos"; version="1.0"; sha256="0004da7vqpq14q5lhs8vyvjl99j8gzxd5wrlw5d1vwfns3ica0q5"; depends=[]; }; solarius = derive2 { name="solarius"; version="0.3.0.2"; sha256="17c765nxq81xshyyl4lfhqjmgvmhn9xyzc6x4qd33wvhh4148f38"; depends=[data_table ggplot2 plyr]; }; solr = derive2 { name="solr"; version="0.1.6"; sha256="0hlysi1yw4l98dcb1shznzrgia9pqzfj0p1hmnfz5gz2j64lf4h4"; depends=[assertthat httr plyr rjson XML]; }; solrium = derive2 { name="solrium"; version="1.0.0"; sha256="1rlf60kynqb8pvzllfdkiabxgnqx60hwm8vy86y9f2bh7d7jsdhf"; depends=[crul dplyr jsonlite plyr R6 tibble xml2]; }; - solvebio = derive2 { name="solvebio"; version="2.3.1"; sha256="0mbb7ri8shknlw1m7985as84i0m837awpsd89yxc5gr1hvzgdvlh"; depends=[dplyr httr jsonlite mime]; }; + solvebio = derive2 { name="solvebio"; version="2.4.0"; sha256="0sikq63i6x6vq0h5d8w92yjf6mhnb8nidn18zv27lfmnl0mwwpnm"; depends=[dplyr httr jsonlite mime]; }; som = derive2 { name="som"; version="0.3-5.1"; sha256="1fbza1jxvwrkf5x3inkj36vshhkn7mz0ajqlxalbfmk6ngjw1x56"; depends=[]; }; som_nn = derive2 { name="som.nn"; version="1.1.0"; sha256="0mw2c2lqvdq9bhndpjyawjy43l4x7clcsx2350j45g7fnchhy602"; depends=[class hexbin kohonen som]; }; soma = derive2 { name="soma"; version="1.1.1"; sha256="1mc1yr9sq9h2z60v40aqmil0xswj5hgxfdh4racq297qw3a97my4"; depends=[reportr]; }; someKfwer = derive2 { name="someKfwer"; version="1.2"; sha256="0widny5l04ja91fy16x4giwrabwqhx0fs3yl48pv9xh4zj6sx563"; depends=[]; }; someMTP = derive2 { name="someMTP"; version="1.4.1"; sha256="19bsn8rny1vv9343bvk8xzhh82sskl0zg0f5r59g9k812q5llchn"; depends=[]; }; somebm = derive2 { name="somebm"; version="0.1"; sha256="1iwwc94k6znh4d3bbjnvwp4chc4wg0iy4v2f99cs4jasrsimb4p8"; depends=[]; }; - sommer = derive2 { name="sommer"; version="3.3"; sha256="1r83inm3b32gqaq2n39pj65h86lr9hxl7ciixqx90pxv15gr6xng"; depends=[data_table lattice MASS Matrix]; }; + sommer = derive2 { name="sommer"; version="3.4"; sha256="02ghcs0w5pkmc20drynd44cli3s4vkxpksw3h9f828maw2n7q9jk"; depends=[data_table lattice MASS Matrix]; }; somplot = derive2 { name="somplot"; version="1.6.4"; sha256="06c8p2lqz3yxmxdl7ji8a3czvxnsbl7bwyiig76pkwc3a5qqfbb9"; depends=[hexbin]; }; sonar = derive2 { name="sonar"; version="1.0.2"; sha256="1f0f5iqi3y9vnxyym14nm8dqxw0vcpnxmvvkx4sm612i4fclg1f9"; depends=[]; }; sonicLength = derive2 { name="sonicLength"; version="1.4.4"; sha256="1v46xzx3jxxxs2biyrq6xbv2lhpz1i95la93hj6dl4jfyikmx0im"; depends=[]; }; @@ -11040,27 +11261,28 @@ in with self; { spAddins = derive2 { name="spAddins"; version="0.2.0"; sha256="19wbcghcf0f9qvqy92jhsdcpmd9b4lkhxndvr71cyhzga539lh1n"; depends=[magrittr purrr rstudioapi stringr]; }; spBayes = derive2 { name="spBayes"; version="0.4-1"; sha256="1cypl3kvcr7nwdkq59zpdhkasz0z5r2gk8hr6wf1a1992k8c33ag"; depends=[abind coda Formula magic]; }; spBayesSurv = derive2 { name="spBayesSurv"; version="1.1.2"; sha256="0m1432gkjkkqmzhksv19yca1wyvp5vjwcmpavhiik4ghfx72rgrr"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; }; - spData = derive2 { name="spData"; version="0.2.8.1"; sha256="0lbrgc701w8x248cmpl3pwngb9kjz1dqxfplrnr3jpyl9d3qkqv4"; depends=[]; }; + spData = derive2 { name="spData"; version="0.2.8.3"; sha256="0w638fmzir2z7mn2ybfb88hlfnx1s36ysv7rmhfyf1s6wpyqcswl"; depends=[]; }; + spGARCH = derive2 { name="spGARCH"; version="0.1.4"; sha256="1bvrhjvw1yyfajm6wyh38dvqkvrx9ymmk45pgbn4qwf47ckryhap"; depends=[Matrix Rcpp RcppEigen Rsolnp spdep truncnorm]; }; spMC = derive2 { name="spMC"; version="0.3.9"; sha256="10cvha5j2pi3b2qiq3jbrc10yi84a595zlg0wshx3wrzxb1rim85"; depends=[]; }; - spMaps = derive2 { name="spMaps"; version="0.2"; sha256="1rrrkbj9bvs217dgvwm686zczcwjqcbq0x268cwl6qnsm39mxzzf"; depends=[raster rgeos sp]; }; spNNGP = derive2 { name="spNNGP"; version="0.1.1"; sha256="0b55arvy5xr592bs2082djyzaa48jbv0y85h7nnj479f8c31grqp"; depends=[coda Formula RANN]; }; spTDyn = derive2 { name="spTDyn"; version="2.0"; sha256="0wandd5iqyqb474096lky04rrgj31gnyqnlmgw8ypxsypd0gqdy0"; depends=[coda sp spacetime spTimer]; }; spTest = derive2 { name="spTest"; version="0.2.5"; sha256="11x2wq3031mqbj4n6hvb4l3sp4382qankdl1v1qh7ab2xa0h6xw8"; depends=[geoR sp]; }; spThin = derive2 { name="spThin"; version="0.1.0"; sha256="06qbk0qiaw7ly1ywbr4cnkmqfasymr7gbhvq8jjbljm0l69fgjpp"; depends=[fields knitr spam]; }; spTimer = derive2 { name="spTimer"; version="3.0-1"; sha256="1vl26d248642grca63kv1rsghqscchkhbybby0fgfg58v042qbs5"; depends=[coda sp spacetime]; }; spa = derive2 { name="spa"; version="2.0"; sha256="1np50qiiy3481xs8w0xfmyfl3aypikl1i1w8aa5n2qr16ksxrnq3"; depends=[cluster MASS]; }; - spaMM = derive2 { name="spaMM"; version="2.3.0"; sha256="1625nplyxklviifhalfwylc0cr2qlhrr57zhm3dj3n2daxjhid87"; depends=[MASS Matrix nlme nloptr proxy Rcpp RcppEigen]; }; + spaMM = derive2 { name="spaMM"; version="2.4.8"; sha256="15hwz4824m3p7vn6faiffx62zwz0ipqs5z8q6r208vy0jivawwsl"; depends=[MASS Matrix nlme nloptr pbapply proxy Rcpp RcppEigen]; }; spaa = derive2 { name="spaa"; version="0.2.2"; sha256="163iipz1knxx1lzby9a3n1f014yqkf25z1wpwwy4gbx7sia499d5"; depends=[]; }; space = derive2 { name="space"; version="0.1-1"; sha256="1qigfz62xz47hqi43aii3yr4h7ddvaf11a5nil7rqprgkd0k6mv3"; depends=[]; }; spaceExt = derive2 { name="spaceExt"; version="1.0"; sha256="0lp8qmb7vcgxqqpsi89zjy7kxpibg3x2mq205pjmsrbbh7saqzr4"; depends=[glasso limSolve]; }; + spaceNet = derive2 { name="spaceNet"; version="1.0.1"; sha256="005jz7bm3c7zi3pgm8wyivc2kl058c0lwdjjzv0qb1vdsq9mpxx1"; depends=[MASS permute RcppTN Rfast sna vegan]; }; spacejam = derive2 { name="spacejam"; version="1.1"; sha256="1mdxmfa1aifh3h279cklm4inin0cx3h0z2lm738bai34j6hpvar7"; depends=[igraph Matrix]; }; spacetime = derive2 { name="spacetime"; version="1.2-1"; sha256="1i6yrmyr9vc5lr99w7qhr0jqdx97ckjqay5g0lqdrk98sygpfl4g"; depends=[intervals lattice sp xts zoo]; }; spacodiR = derive2 { name="spacodiR"; version="0.13.0115"; sha256="0c0grrvillpwjzv6fixviizq9l33y7486ypxniwg7i5j6k36nkpl"; depends=[colorspace picante Rcpp]; }; spacom = derive2 { name="spacom"; version="1.0-5"; sha256="0b6yh4q9f0ibwlwyckwaya9m645j22x6bdz9mz3chass8qza6bls"; depends=[foreach iterators lme4 Matrix nlme spdep]; }; - spacyr = derive2 { name="spacyr"; version="0.9.6"; sha256="0s4gn2nfd2bamvpzk68n4ym1nylzay8hrgkax6c9ghhvi3p7rch7"; depends=[data_table reticulate]; }; + spacyr = derive2 { name="spacyr"; version="0.9.9"; sha256="1zdn57k5iacy73xmac32mslqzidpn3d38qyrnbzkzv2slysqwgkw"; depends=[data_table reticulate]; }; spaero = derive2 { name="spaero"; version="0.2.0"; sha256="0srkah89z23j30y2smlnyhf97mm123apma8vgmgfarbx188bkwpn"; depends=[]; }; - spam = derive2 { name="spam"; version="2.1-2"; sha256="06c2bal2hj4qjb65qagfq6icy52cjn8sn8yl0c0dbzcz4gmidvy2"; depends=[dotCall64]; }; - spam64 = derive2 { name="spam64"; version="2.1-2"; sha256="15cjdz71fh04hcqjn93lnnqbmyfgm67p1x5lyiiq3wz7k1fk5a0h"; depends=[]; }; + spam = derive2 { name="spam"; version="2.1-4"; sha256="0xdr6rmbsx6qq3n4225hr9sma56f33p4pbfirb4r1wxspy5d0zi9"; depends=[dotCall64]; }; + spam64 = derive2 { name="spam64"; version="2.1-4"; sha256="186q2yl7kjmh13k51zysa6c86dcsydiaam51c2v9v8gk8pgagfgf"; depends=[]; }; spanel = derive2 { name="spanel"; version="0.1"; sha256="1riyvvfij277mclgik41gyi01qv0k466wyk2wbqqhlvrlj79yzsc"; depends=[]; }; spanish = derive2 { name="spanish"; version="0.3.2"; sha256="1dg4wnvxhybhagag9xx27af6760dlclaivx27mfxywfha312xfpn"; depends=[magrittr xml2]; }; spant = derive2 { name="spant"; version="0.9.0"; sha256="0cfvi5pxg1wg9kl9rxrarbb3jaxwjfwy34lmg1yy5nj8ld8lzlfc"; depends=[abind complexplus foreach matrixcalc minpack_lm nnls plyr pracma signal smoother stringr svd tkrplot]; }; @@ -11078,17 +11300,18 @@ in with self; { sparr = derive2 { name="sparr"; version="2.2-11"; sha256="01li60cybv9kg54zkc9rh4ra6danzbnap9rx59pgfj7zkhs2phmn"; depends=[doParallel foreach misc3d spatstat spatstat_utils]; }; sparseBC = derive2 { name="sparseBC"; version="1.1"; sha256="1w60n2875n809lbrn0hd4kdmsyfd64aikgzxchza8b59x77l0psy"; depends=[fields glasso]; }; sparseEigen = derive2 { name="sparseEigen"; version="0.1.0"; sha256="0vqcy61rarmp3liz8fr3vs3y40hkb3wfw89b5xsj1byaiap4772s"; depends=[]; }; - sparseFLMM = derive2 { name="sparseFLMM"; version="0.2.0"; sha256="0r7080d2s5vrcwi4h11iiapmdl0l59kd0j8r1avmw9x0d0qw6lh8"; depends=[data_table MASS Matrix mgcv refund]; }; - sparseHessianFD = derive2 { name="sparseHessianFD"; version="0.3.3.2"; sha256="0475zyij6h19diaalnkj39j4n0lx6mgfq3sl479mlngf9fhr9zvx"; depends=[Matrix Rcpp RcppEigen]; }; + sparseFLMM = derive2 { name="sparseFLMM"; version="0.2.2"; sha256="12143qij3p8vry9i02i52nj00m1ckkwg2rq99dq00dq43axcpvgw"; depends=[data_table MASS Matrix mgcv refund]; }; + sparseHessianFD = derive2 { name="sparseHessianFD"; version="0.3.3.3"; sha256="1a0pkbb7yk9pp57zyy96k7p5xy1s44jbfy0nz8zyw4h774369yfm"; depends=[Matrix Rcpp RcppEigen]; }; sparseLDA = derive2 { name="sparseLDA"; version="0.1-9"; sha256="1k3sw9kc40yxnfss4vrsx34qxmv8ssddyhbfjhxrdldvblhbwchb"; depends=[elasticnet MASS mda]; }; sparseLTSEigen = derive2 { name="sparseLTSEigen"; version="0.2.0"; sha256="11llmrkq0pnrdphgjvhmg269bq3xbbn4s7kd7xhvk62sigvspkcj"; depends=[Rcpp RcppEigen robustHD]; }; - sparseMVN = derive2 { name="sparseMVN"; version="0.2.1"; sha256="1k4jiday24rdiscprwifrc0py13h707ijavspz15jannvjaz9qdh"; depends=[Matrix]; }; + sparseMVN = derive2 { name="sparseMVN"; version="0.2.1.1"; sha256="0ikh1i4vid6r4sx9pdjqc5wbh4xdj966mr0b7jb1vjw18wrzad8q"; depends=[Matrix]; }; sparseSEM = derive2 { name="sparseSEM"; version="2.5"; sha256="0ig8apsi94kvbcq3i8nzmywbdizlss7c6r9bppcyl9lxgikc3cds"; depends=[]; }; sparseSVM = derive2 { name="sparseSVM"; version="1.1-2"; sha256="1bv9ipfs275vr1hmz7g7w4rimvbkg15wjh3xj3cx1zam91k384k9"; depends=[]; }; sparsebn = derive2 { name="sparsebn"; version="0.0.5"; sha256="19315nzj9pz98498amlhas6ii3vwvn3qxz5a6136nh2xfwfg2bhc"; depends=[ccdrAlgorithm discretecdAlgorithm sparsebnUtils]; }; - sparsebnUtils = derive2 { name="sparsebnUtils"; version="0.0.5"; sha256="0hdzrp2wcjl849v7np7ybmyp15zjfqr8gkwhij2qjrpprf7z8s57"; depends=[Matrix nnet]; }; + sparsebnUtils = derive2 { name="sparsebnUtils"; version="0.0.6"; sha256="02a75ldvxfn0awn2aaws3fgd4zzk1jjfry4nxjf3y1grdbbz396y"; depends=[Matrix nnet]; }; sparsediscrim = derive2 { name="sparsediscrim"; version="0.2.4"; sha256="1sa3yssncbpx8yid5wrnxdq7jl3hy5rskyh60v5x592ijcb2mif0"; depends=[bdsmatrix corpcor dplyr ggplot2 mvtnorm]; }; - sparseinv = derive2 { name="sparseinv"; version="0.1.1"; sha256="1c0vkfq4kh78rs8x484jyi29rcswq9slljxvvc7km6qlz1mnrzlm"; depends=[Matrix spam]; }; + sparseinv = derive2 { name="sparseinv"; version="0.1.2"; sha256="1lf0lbk8dslasd6m1rq4wzpxa1v427j5i9j0rrw5xjx80z1gc206"; depends=[Matrix spam]; }; + sparsepca = derive2 { name="sparsepca"; version="0.1.2"; sha256="0wk2nm37p15gb8i4s45izzzdmwywr56kv4g0j3jd5s3slm224vv4"; depends=[rsvd]; }; sparsepp = derive2 { name="sparsepp"; version="0.2.0"; sha256="0ibadyv7lchxw3y1dspjnbhc4pin4dxwqj9rdrdxfbvlx0i3jgxr"; depends=[]; }; sparsereg = derive2 { name="sparsereg"; version="1.2"; sha256="1ipsang2fppmjx4h5ljgzx3c44z3lggc376ghrqqgmxb5ql8bcp3"; depends=[coda ggplot2 GIGrvg glmnet gridExtra MASS MCMCpack msm Rcpp RcppArmadillo VGAM]; }; sparsestep = derive2 { name="sparsestep"; version="1.0.0"; sha256="0f3wrwiyn990sn3x9r50zgs8cr76nmyisdc7qismgx1nn5yx5z0g"; depends=[Matrix]; }; @@ -11097,7 +11320,6 @@ in with self; { sparsio = derive2 { name="sparsio"; version="1.0.0"; sha256="12nbydgzl3qlanlsfdy8bvg6rxa439lv0z0vbyqssqwky3mmg5c3"; depends=[Matrix Rcpp]; }; spartan = derive2 { name="spartan"; version="3.0.0"; sha256="1q78l04nbrllrsk14haln5s829rkkhkhmb34xzfgyd8glbi7z4ay"; depends=[e1071 ggplot2 gplots lhs mco mlegp neuralnet plotrix psych randomForest XML]; }; spass = derive2 { name="spass"; version="1.1"; sha256="1kr2ixyvsm82h2brdm51bzll69632mkj9f88a2ny0pcyqrbggg83"; depends=[geepack MASS multcomp mvtnorm Rcpp]; }; - spatcounts = derive2 { name="spatcounts"; version="1.1"; sha256="0rp8054aiwc62r1m3l4v5dh3cavbs5h2yb01453bw9rwis1pj2qm"; depends=[]; }; spate = derive2 { name="spate"; version="1.5"; sha256="1hlh4iwx1lrl8r2gag33z2xdv6k4hg86ch4f0jlqnqkhm9hapshf"; depends=[mvtnorm truncnorm]; }; spatgraphs = derive2 { name="spatgraphs"; version="3.2-1"; sha256="0n7f3r4ahv1w5mwx5mnib3g4263kz73rh1fcfk5wb12y52x8n1iz"; depends=[Matrix Rcpp]; }; spatial = derive2 { name="spatial"; version="7.3-11"; sha256="04aw8j533sn63ybyrf4hyhrqm4058vfcb7yhjy07kq92mk94hi32"; depends=[]; }; @@ -11113,26 +11335,26 @@ in with self; { spatialprobit = derive2 { name="spatialprobit"; version="0.9-11"; sha256="1cpxxylc0pm7h9m83m2cklrh4jni5x79r5m5gibxi6viahwxn9kc"; depends=[Matrix mvtnorm spdep tmvtnorm]; }; spatialsegregation = derive2 { name="spatialsegregation"; version="2.44"; sha256="02s75q6ylzm6xzr1q23fhps3svlb0ix86dzgr23wf42369gs7h0g"; depends=[spatstat]; }; spatialwarnings = derive2 { name="spatialwarnings"; version="1.0"; sha256="1j8zr9pv769ji9ynzrhah3nd56mjjap450c28g26ff00l3kr9l03"; depends=[ggplot2 moments plyr poweRlaw Rcpp RcppArmadillo reshape2 tidyr VGAM]; }; - spatstat = derive2 { name="spatstat"; version="1.55-0"; sha256="05mpw0zdw4mdlkcf8q9h0nmviq37ihwpgl472wyxqw69l93vk4k3"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; }; + spatstat = derive2 { name="spatstat"; version="1.55-1"; sha256="01rzaaws3nkzqdpqvq54glxxl611gz8vi7l7jv988685y8r8q4wa"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; }; spatstat_data = derive2 { name="spatstat.data"; version="1.2-0"; sha256="0nzw5y1in36mib5g4v076b9jii71jjidxajn3n8v67lvl48dmwgm"; depends=[spatstat_utils]; }; spatstat_local = derive2 { name="spatstat.local"; version="3.5-7"; sha256="1sdcx4qxv0z5q97rljn34mssbs4w6qbqxhn71xmkns01xypl1wr2"; depends=[spatstat spatstat_utils tensor]; }; spatstat_utils = derive2 { name="spatstat.utils"; version="1.8-0"; sha256="053j67mrnjcw1mdbm3qjvf67hrfnhsma4770r7l67bs4xys2qhfg"; depends=[]; }; spatsurv = derive2 { name="spatsurv"; version="1.1"; sha256="0fakhz2qc5vb7ym2ik7hilv8g5fn3z7s16hzngq1n591xza5b74g"; depends=[fields geostatsp iterators lubridate Matrix OpenStreetMap RandomFields raster RColorBrewer rgeos rgl sp spatstat stringr survival]; }; spbabel = derive2 { name="spbabel"; version="0.4.8"; sha256="1f0lradf7a3fjkdhbviw24awpqj1pzw1wfvigrqhnmf0jjw3nng3"; depends=[dplyr sp tibble]; }; - spc = derive2 { name="spc"; version="0.5.4"; sha256="1ii848jcpsg5jij1i17flhz4v5vgsb8j6iijgpha7sigmj7gynk3"; depends=[]; }; - spc4sts = derive2 { name="spc4sts"; version="0.2.1"; sha256="1mwgqj9gph3fzvmqp03khi541g13ljx8xn09ji9qcjl6j032rk2p"; depends=[gridExtra rpart]; }; + spc = derive2 { name="spc"; version="0.6.0"; sha256="118r2yjfmzm0bi3ccx9pzi56vw2kbjz0pbxrjqdks0075fk7ij0q"; depends=[]; }; + spc4sts = derive2 { name="spc4sts"; version="0.3.1"; sha256="1g7q3g486qns8qwpki2nbiy995v7fl1ibmk4645ws9yxgybw5mxj"; depends=[gridExtra rpart]; }; spcadjust = derive2 { name="spcadjust"; version="1.1"; sha256="016i3zaaq800x4niz4fixa57nfj1m10sz5xskff4vq4v9fjn2sl0"; depends=[]; }; - spcosa = derive2 { name="spcosa"; version="0.3-7"; sha256="11q6zr4y0hv1vnhl45g38f1906pq9a695ynn6yfkzlpz1kbf2jma"; depends=[ggplot2 rJava sp]; }; + spcosa = derive2 { name="spcosa"; version="0.3-8"; sha256="1hw3njn2c8wj8bk2qpnbi2mbhj485q3gpbjf1gq9k6my4brdp86b"; depends=[ggplot2 rJava sp]; }; spcov = derive2 { name="spcov"; version="1.01"; sha256="1brmy64wbk56bwz9va7mc86a0ajbfy09qpjafyq2jv7gm7a35ph5"; depends=[]; }; spcr = derive2 { name="spcr"; version="2.0"; sha256="1n0lva9brpzxysw6p7l88cj8d46jng2zd7zvr5brqldzd3yl63l9"; depends=[]; }; spd = derive2 { name="spd"; version="2.0-1"; sha256="00zxh4ri47b61jkcjf5idl9hhlfld6rhczsnhmjsax59884f2i8m"; depends=[KernSmooth]; }; - spdep = derive2 { name="spdep"; version="0.7-4"; sha256="1iskcrlka8p49i3lvfp9l5y4q9vapdn0m6wlin7pq47017jz2hwn"; depends=[boot coda deldir expm gmodels LearnBayes MASS Matrix nlme sp spData]; }; + spdep = derive2 { name="spdep"; version="0.7-7"; sha256="0wrlximy4w5y5aszy3pacmf3ag224chl12q4rj4r7ky6zw2sn1ns"; depends=[boot coda deldir expm gmodels LearnBayes MASS Matrix nlme sp spData]; }; spdownscale = derive2 { name="spdownscale"; version="0.1.0"; sha256="0pl560km9629iwy13h7359ab7ixzs09hg986kvk0xbnc348srb86"; depends=[]; }; spdplyr = derive2 { name="spdplyr"; version="0.1.3"; sha256="1f34yzj9z4f1dj7pqaayk0mvabzwa6kc3kwi1pmpikl1afgsyv25"; depends=[dplyr lazyeval rlang sp spbabel tibble]; }; spduration = derive2 { name="spduration"; version="0.17.0"; sha256="1s41rs5nbdrknn6ag7zn8ds3203q2x5z5mb9vf80y6ba6w3ksr32"; depends=[corpcor forecast MASS plyr Rcpp RcppArmadillo separationplot xtable]; }; spdynmod = derive2 { name="spdynmod"; version="1.1.3"; sha256="0qh0kkxs6hk344k3fys0g9yy0xl0kwnwl18bgiak53fd1k7whskq"; depends=[animation deSolve raster sp]; }; spe = derive2 { name="spe"; version="1.1.2"; sha256="0xyx42n3gcsgqmy80nc9la6p6gq07anpzx0afwffyx9fv20fvys0"; depends=[]; }; - speaq = derive2 { name="speaq"; version="2.2.0"; sha256="1y6sa639b2pcxcd2lh9ivfllvc734pmb0bv63hcnr74f8nmn3ywf"; depends=[cluster data_table doSNOW foreach ggplot2 gridExtra impute MassSpecWavelet missForest mQTL reshape2 rvest xml2]; }; + speaq = derive2 { name="speaq"; version="2.3.1"; sha256="18v39nm9h4388asl0vk2w874kpg5spp7fyhib04cyb91hhx910sr"; depends=[cluster data_table doSNOW foreach ggplot2 gridExtra impute MassSpecWavelet missForest mQTL reshape2 rvest xml2]; }; spec = derive2 { name="spec"; version="0.1.3"; sha256="0i1c5wjrca36zf5ak95i8n57hy1jj8w0qkkpnjqpn3xv3nvqccr2"; depends=[csv encode magrittr]; }; speccalt = derive2 { name="speccalt"; version="0.1.1"; sha256="0j7rbidmmx78vgwsqvqjbjjh92fnkf2sdx0q79xlpjl2dph7d6l6"; depends=[]; }; speciesgeocodeR = derive2 { name="speciesgeocodeR"; version="1.0-4"; sha256="033877l9sxcvvzpyf9aw19sj8qfscim663j2y2az8bl9c79xw4ph"; depends=[maps raster sp]; }; @@ -11149,7 +11371,7 @@ in with self; { spellcheckr = derive2 { name="spellcheckr"; version="0.1.2"; sha256="09snc1ymzr4njnr3w502b84dqwjjd414higjxqi48jvh27br5k1l"; depends=[data_table dplyr stringr]; }; spelling = derive2 { name="spelling"; version="1.1"; sha256="10zhzbpyjw5lkg4iyjwgs5xp2c8bgwyzjg146fcml6cjs6xhl8ni"; depends=[commonmark hunspell knitr xml2]; }; sperich = derive2 { name="sperich"; version="1.5-7"; sha256="1apgq5nsl6nw674dy7bc7r7z962wcmqsia5n67a8n6c5lcgcif3f"; depends=[foreach rgdal SDMTools sp]; }; - sperrorest = derive2 { name="sperrorest"; version="2.1.1"; sha256="0rbfr6dg8dx6lm3npsrinr2vxxsq0f3xwprzl0fyzabdhd82na4y"; depends=[doFuture foreach future gdata magrittr pbapply pbmcapply purrr ROCR rpart stringr]; }; + sperrorest = derive2 { name="sperrorest"; version="2.1.5"; sha256="126vwk3bxs27gblakc5nplj0k90a21gks9d0kbyanlxc2ihsy243"; depends=[doFuture foreach future future_apply gdata glue magrittr pbapply pbmcapply purrr ROCR rpart stringr]; }; spew = derive2 { name="spew"; version="1.3.0"; sha256="09g8j5v5k455c3kqm1fn09ql3x34xy22igicakwl99s8gsln7v3p"; depends=[maptools plyr sp]; }; spex = derive2 { name="spex"; version="0.4.0"; sha256="0b2zcpbjr8lqfsmwvmy4lp88xz16v7fyqx1yv10yhcgxlgw0yw8p"; depends=[quadmesh raster sp]; }; spfrontier = derive2 { name="spfrontier"; version="0.2.3"; sha256="0br54kkva4m3yyqfjh3cs5wf4kk3ax6yg0h8cl5qiy38dvssa5qd"; depends=[ezsim moments mvtnorm numDeriv optimx spdep tmvtnorm]; }; @@ -11158,7 +11380,7 @@ in with self; { spgs = derive2 { name="spgs"; version="1.0-1"; sha256="1jabgcc8bd6kikcd5rv9xczbg6r52mwyc68r8filn5i0gva4by57"; depends=[]; }; spgwr = derive2 { name="spgwr"; version="0.6-32"; sha256="0xdv0yy6md9kv1aay6xxj1k3x59apflip0qpfvyk2aa2wbn1sx2v"; depends=[sp spData]; }; sphereplot = derive2 { name="sphereplot"; version="1.5"; sha256="1i1p20h95cgw5wqp9bwfs9nygm4dxzsggz08ncjs1xrsvhhq9air"; depends=[rgl]; }; - sphet = derive2 { name="sphet"; version="1.6"; sha256="0149wkak7lp2hj69d83rn05fzh9bsvyc1kyg0d3b69sx92kqlwr0"; depends=[Matrix nlme sp spdep]; }; + sphet = derive2 { name="sphet"; version="1.7"; sha256="0savvqz3v5awsr7kcghg6yzkqdpm01kwp7jrg9ajfb3146gg8mlq"; depends=[Matrix nlme sp spdep]; }; spi = derive2 { name="spi"; version="1.1"; sha256="0gc504f7sji5x0kmsidnwfm7l5g4b1asl3jkn2jzsf2nvjnplx1z"; depends=[]; }; spider = derive2 { name="spider"; version="1.5.0"; sha256="1y034v42jxjl3vj87iz5kaizq7fwppmn56z7yyvrrmk5ps4nqr1j"; depends=[ape pegas]; }; spiderbar = derive2 { name="spiderbar"; version="0.2.1"; sha256="1mm9g58riyjxpfwjj28shlw9zlycsgcxl6xw8im0gm815v2plyhv"; depends=[Rcpp]; }; @@ -11166,29 +11388,31 @@ in with self; { spikeSlabGAM = derive2 { name="spikeSlabGAM"; version="1.1-11"; sha256="1f16jvdj6kbiiypnbbj10nj7l88kkrxasrribqpjv7ai62dlximn"; depends=[akima cluster coda ggplot2 gridExtra MASS MCMCpack mvtnorm R2WinBUGS reshape scales]; }; spikes = derive2 { name="spikes"; version="1.1"; sha256="080sna0sgii61kai5sirs6cijnvk1012djwfw705di9y2lvk1hqk"; depends=[emdbook]; }; spikeslab = derive2 { name="spikeslab"; version="1.1.5"; sha256="0dzkipbrpwki6fyk4hqlql3yhadwmclgbrx00bxahrmlaz1vjzh2"; depends=[lars randomForest]; }; - spind = derive2 { name="spind"; version="2.1.2"; sha256="0z00fc9r6aycv5v9ms7v64xszfc58wvy6y7bd2z0xima1gpppq2r"; depends=[gee geepack ggplot2 lattice MASS RColorBrewer rje splancs stringr waveslim]; }; + spind = derive2 { name="spind"; version="2.1.3"; sha256="173jpyq13vdhcwbxwx188fp7jg8l67yh6kxlai13z8lqnlpl1xqh"; depends=[gee geepack ggplot2 lattice MASS RColorBrewer rje splancs stringr waveslim]; }; spinyReg = derive2 { name="spinyReg"; version="0.1-0"; sha256="0kbg7rncrrl5xdsaw9vj909x97mfp77mjnvghczplmnwmmanyn72"; depends=[]; }; splancs = derive2 { name="splancs"; version="2.01-40"; sha256="0qs3lwyllrkahnvqbm8bzrf03bm9zk4s7p1n19s638y4xf0l6x3r"; depends=[sp]; }; splashr = derive2 { name="splashr"; version="0.4.1"; sha256="1gydnl6qdkqxvgzy3j6n8y4nan4wz6p7wybcgnm5p37n7q6m2rhk"; depends=[curl docker formatR HARtools httr jsonlite lubridate magick openssl purrr scales stringi xml2]; }; splines2 = derive2 { name="splines2"; version="0.2.7"; sha256="1hh7zd2gqmfc5xx91kjwi465yvq6lwrhgjdim1b40g6canh0ixlb"; depends=[]; }; + splitFeas = derive2 { name="splitFeas"; version="0.1.0"; sha256="1cfiis32h5kkp8r1mndmj4xss9gw96vdzk7q68q3jhbwqiaxp9rp"; depends=[corpcor matrixStats]; }; splitfngr = derive2 { name="splitfngr"; version="0.1.1"; sha256="0gz65acnkil9xjspl2kzpzyhj7lslga9g3p0k79xh25ia6qal5ws"; depends=[lbfgs]; }; - splithalf = derive2 { name="splithalf"; version="0.2.0"; sha256="1bpw8mw88aryk4n0bdm4f356wsix6npdpl91qfbwayhdh0g5302f"; depends=[plyr]; }; - splitstackshape = derive2 { name="splitstackshape"; version="1.4.2"; sha256="0m9karfh0pcy0jj3dzq87vybxv9gmcrq5m2k7byxpki95apbrsmg"; depends=[data_table]; }; + splithalf = derive2 { name="splithalf"; version="0.3.1"; sha256="01ip3brnlyxlxr1hmnmc2w6jg4vm5gjk8fwavclmv7m7hr2bb4xh"; depends=[dplyr tidyr]; }; + splitstackshape = derive2 { name="splitstackshape"; version="1.4.4"; sha256="0vhgb4pysp7hbph7kq8b38m4gqhal40j4p7gij2wrc2rajspzhkq"; depends=[data_table]; }; splm = derive2 { name="splm"; version="1.4-10"; sha256="0zz28mfs84nqyvl1l0ba7yrhgcxxzw1v0542jc39h4pr537yz1nc"; depends=[bdsmatrix ibdreg MASS Matrix maxLik nlme plm spam spdep]; }; splot = derive2 { name="splot"; version="0.3.2"; sha256="1nix7pzqlla3iga99pw9jqcylg4j5xpfrf94y0abzpy3z4gq3kgc"; depends=[]; }; - spls = derive2 { name="spls"; version="2.2-1"; sha256="0zgk9qd825zqgikpkg13jm8hi6ncg48qw5f985bi145nwy9j19xs"; depends=[MASS nnet pls]; }; + spls = derive2 { name="spls"; version="2.2-2"; sha256="11xp6wnxizc8g91ci9fd7lbjc8pin84c9ak8lr8yg2jyd2l351j9"; depends=[MASS nnet pls]; }; splus2R = derive2 { name="splus2R"; version="1.2-2"; sha256="0xrbj8vxy0pc6hl7m8abv71d3hjw47cl51s7j7priadyqczkq6sz"; depends=[]; }; splusTimeDate = derive2 { name="splusTimeDate"; version="2.5.0-137"; sha256="0bpzv6a05hnqnnz2znnkb3f34r56krhc595zjnn82azxj4a53njh"; depends=[]; }; splusTimeSeries = derive2 { name="splusTimeSeries"; version="1.5.0-74"; sha256="0aikw6ckc0a7lrgjlcdmqspgrx0fc4iysd7jynd2lsf1hxy4pz35"; depends=[splusTimeDate]; }; - spm = derive2 { name="spm"; version="1.0.0"; sha256="0q87sbp39axmlnj15srnsysm7d9rpm5q6zic0h6hc1xwp205v0sf"; depends=[gbm gstat psy randomForest sp]; }; + spm = derive2 { name="spm"; version="1.1.0"; sha256="0xx1g6ir0sanj2p6xgsdghymx1iy2bzsany2j87q49y5hah7349j"; depends=[biomod2 gbm gstat psy randomForest ranger sp]; }; spm12r = derive2 { name="spm12r"; version="2.7.4"; sha256="0v0zmsbzk6446n1yipz3w99n0n4yya6idff3gfyj7fgq10pcalgz"; depends=[git2r matlabr neurobase oro_nifti R_utils]; }; - spmoran = derive2 { name="spmoran"; version="0.1.2"; sha256="19rl14w0zry649c3kgvrmb7bsw3dxsprf52naiqfxxs7qy3pxcm2"; depends=[doParallel fields foreach ggplot2 Matrix vegan]; }; + spmoran = derive2 { name="spmoran"; version="0.1.3"; sha256="1bvq91k346w2cvb3yi10qgidabf3s8whlk6glqrlb1k6na7l8k3y"; depends=[doParallel fields foreach ggplot2 Matrix vegan]; }; spnet = derive2 { name="spnet"; version="0.9.1-0"; sha256="1fy0fpgz2k985brfqyza1l49y0w2j9z308n542pgmkzqsnsdscpw"; depends=[shape sp]; }; + spnn = derive2 { name="spnn"; version="1.1"; sha256="0i77lpxrfa1jxi9znlmn5knmcjpf17q4hf8999b1x8lhqlhiizc1"; depends=[MASS]; }; spocc = derive2 { name="spocc"; version="0.7.0"; sha256="0ar107c7snbh1iaib3xddng88861h3gc56whicx5krl3zf2xgjqa"; depends=[crul data_table jsonlite lubridate rbison rebird rgbif ridigbio rvertnet tibble whisker wicket]; }; spongecake = derive2 { name="spongecake"; version="0.1.2"; sha256="13fxizbfjvqkhkmxk5bwv2fj2xyjkbxrxicpdgwpg0wsk4dhj3s8"; depends=[ggplot2 jpeg magrittr plyr]; }; sporm = derive2 { name="sporm"; version="1.1"; sha256="07sxz62h4jb7xlqg08sj4wpx121n9jfk65196mnxdvb36lqmb4hp"; depends=[]; }; spotifyr = derive2 { name="spotifyr"; version="1.0.0"; sha256="1f7sv6qc8bim8vkcsma96zdzd1ci73dpag2dp27mqjcbh716xfy0"; depends=[dplyr httr lubridate purrr tidyr]; }; - spp = derive2 { name="spp"; version="1.15.3"; sha256="1wn7a6aznxyvr6kwgf3bd8c1n1pxm4b43km3pgfw8mf2vx69cynd"; depends=[BH caTools Rcpp Rsamtools]; }; + spp = derive2 { name="spp"; version="1.15.4"; sha256="0gjg0g30y9w445mimrd29s44ryla1bmh1mdwj4hb85s1yi1l4h25"; depends=[BH caTools Rcpp Rsamtools]; }; sppmix = derive2 { name="sppmix"; version="1.0.2"; sha256="1924lrxjlijlbvjbkkwb3pfa4klg49ph6hz66b7kyy1371wa2b9y"; depends=[fields ggplot2 mvtnorm Rcpp RcppArmadillo rgl spatstat]; }; spray = derive2 { name="spray"; version="1.0-3"; sha256="0zy2dwzk33cwch0pdhhsyiy169z39iij3zvvjg81gxa29pq0h1ab"; depends=[magic partitions Rcpp]; }; sprex = derive2 { name="sprex"; version="1.4.1"; sha256="14idml4mipd4wyza7hqf49ww4dparmwaps35hxm8jg5h0w1pgh7j"; depends=[swfscMisc]; }; @@ -11202,8 +11426,8 @@ in with self; { spt = derive2 { name="spt"; version="1.13-8-8"; sha256="18s74pxfmsjaj92z2a34nq90caf61s84c616yv33a0xvfvp32qr5"; depends=[]; }; sptemExp = derive2 { name="sptemExp"; version="0.1.1"; sha256="0a4y355j24sll8jmm17lh4j13k21b3nlalsxzpzx2gp5xw1x7jr6"; depends=[automap BayesX BayesXsrc bcv deldir doParallel foreach limSolve ncdf4 plyr R2BayesX raster Rcpp RcppEigen rgdal rgeos sp SpatioTemporal]; }; sptm = derive2 { name="sptm"; version="17.12-7"; sha256="1l5in0jkqg44rr2id3h25jrfbn7x855p31z338hnmdpfwkpm2b1a"; depends=[kyotil survey survival]; }; - spuRs = derive2 { name="spuRs"; version="2.0.0"; sha256="0lbc3nny6idijdaxrxfkfrn40bxfyp9z3yl9mwb1k6cyd10v5mfj"; depends=[lattice MASS]; }; - spup = derive2 { name="spup"; version="0.1-1"; sha256="0iwmydvd6bwpyr4q3hk2hlvgrvpzrdhnbq0frxadwcaaap75pfv0"; depends=[gstat magrittr mvtnorm purrr raster whisker]; }; + spuRs = derive2 { name="spuRs"; version="2.0.1"; sha256="1vjyhm4dvqm5d4kqjiwk7yy85455dgv4sy9kr5427zci3jlmxqij"; depends=[lattice MASS]; }; + spup = derive2 { name="spup"; version="1.2-1"; sha256="05cl4kddg2f37238am92bbkyl5davd2a6jjb1akzn1v3ha6qbhpq"; depends=[gstat magrittr mvtnorm purrr raster whisker]; }; sqldf = derive2 { name="sqldf"; version="0.4-11"; sha256="0q12vsb53p2wchgp8wfz5bk08wfnm0jxjrakclj4jyy6x3a7ksff"; depends=[chron DBI gsubfn proto RSQLite]; }; sqliter = derive2 { name="sqliter"; version="0.1.0"; sha256="17jjljq60szz0m8p2wc5l56659aap7an5gknc848dp89ycjgj3zx"; depends=[DBI functional RSQLite stringr]; }; sqlscore = derive2 { name="sqlscore"; version="0.1.2"; sha256="0pl4nf59b8jy8rkqs2z684lxfqh01284h3cx97a1igpy4qqj712b"; depends=[dbplyr]; }; @@ -11216,7 +11440,7 @@ in with self; { ss3sim = derive2 { name="ss3sim"; version="0.9.5"; sha256="0rdb49bfxvyh0jrqycrv1hxvh7y4kvw81jccjg5ma734x44q0vm5"; depends=[bbmle dplyr foreach ggplot2 gtools lubridate magrittr plyr r4ss]; }; ssa = derive2 { name="ssa"; version="1.2.1"; sha256="10x58c57pa9x6svm4h4xrss72ikin9lpf3ihjwmnkgnaicvsd0bx"; depends=[iterators]; }; ssanv = derive2 { name="ssanv"; version="1.1"; sha256="17a4a5azxm5h2vxia16frcwdyd36phpfm7fi40q6mnnrwbpkzsjd"; depends=[]; }; - ssc = derive2 { name="ssc"; version="1.0"; sha256="1hhlpcm1mdwkcxrprk5nc2yi3l69lz13av50y3cyz5vj73jhsg44"; depends=[proxy]; }; + ssc = derive2 { name="ssc"; version="2.0.0"; sha256="0w7c0blqny7dyjh1a6l9lr7nysgpmasfqbf7wf368rwmv59pk0b3"; depends=[proxy]; }; sscor = derive2 { name="sscor"; version="0.2"; sha256="1kcrr90cxg6k4qkc3pidhkwf4dsnlgbxczxigr2afwpd9cpf104c"; depends=[mvtnorm pcaPP robustbase]; }; ssd = derive2 { name="ssd"; version="0.3"; sha256="1z61n9m6vn0ijawyz924ak0zfl9z13jsb4k4575b7c424ci2p6gy"; depends=[]; }; ssfa = derive2 { name="ssfa"; version="1.1"; sha256="0fkyalhsjmx2sf8xxkppf4vd272n99nbkxh1scidrsgp4jk6z7fx"; depends=[Matrix maxLik sp spdep]; }; @@ -11236,6 +11460,7 @@ in with self; { ssym = derive2 { name="ssym"; version="1.5.7"; sha256="0l5d921vlhd4qwddllrgcxpq3bhivvy5ikh3ixdy3s140rzpgwrv"; depends=[Formula GIGrvg normalp numDeriv sandwich survival]; }; st = derive2 { name="st"; version="1.2.5"; sha256="0dnyfjcz37gjjv87nrabb11gw2dlkqhq3mrxdpkzahx0w0g0q0pb"; depends=[corpcor fdrtool sda]; }; stR = derive2 { name="stR"; version="0.3"; sha256="0zad25s9wp4lapkww3rdbqsd4y7p8xhz9is7avq400srxakinx7n"; depends=[foreach forecast Matrix quantreg rgl SparseM]; }; + staRdom = derive2 { name="staRdom"; version="1.0.3"; sha256="07ciabm0wakzdybhgdmiakdh7mygc38c8vqs9czgq65729928aqq"; depends=[doParallel dplyr drc eemR foreach GGally ggplot2 multiway plotly pracma readr stringr tibble tidyr zoo]; }; staTools = derive2 { name="staTools"; version="0.1.0"; sha256="1ksr0sjkhlwh0fkwcxjcxzbyxs1g78m4spkhrmgdpfzmk5zskqf9"; depends=[magicaxis Rcpp VGAM]; }; stability = derive2 { name="stability"; version="0.2.0"; sha256="154dp26aghznibnp9h7j86hi30caylvyxp87jkf2p7cb4l3qn5r4"; depends=[dplyr ggfortify ggplot2 lme4 magrittr matrixStats reshape2 rlang scales tibble tidyr]; }; stable = derive2 { name="stable"; version="1.1.2"; sha256="11irpn0qfblzskdr71991jlmdrbqqqpszppn5pii3lr5hflqqr1d"; depends=[rmutil]; }; @@ -11247,7 +11472,7 @@ in with self; { stacomirtools = derive2 { name="stacomirtools"; version="0.5.2"; sha256="1a33yy594699b05lb32zwx6yhmvxzwly6vvf8xzqg6lac64p26r5"; depends=[RODBC xtable]; }; stagePop = derive2 { name="stagePop"; version="1.1-1"; sha256="0949r5ibl3sb10sr5xsswxap3wd824riglrylk7fx43ynsv5hzpy"; depends=[deSolve PBSddesolve]; }; stam = derive2 { name="stam"; version="0.0-1"; sha256="1x1j45fir64kffny0nssb2hwn4rcp8gd2cjv6fw4yy0l4d0xi5iv"; depends=[np sp]; }; - stampr = derive2 { name="stampr"; version="0.1"; sha256="1w7zp5n41gzahv4psdgw5a5mylcxlf12931fnjz0q2cwqj9cwql5"; depends=[deldir maptools raster rgdal rgeos sp spdep]; }; + stampr = derive2 { name="stampr"; version="0.2"; sha256="10mc71kgnw5712q2gvzd4bmjaw1879r7s599hfsjap21idqb2k2m"; depends=[deldir maptools raster rgdal rgeos sp spdep]; }; standardize = derive2 { name="standardize"; version="0.2.1"; sha256="0ijyqy09fl478cvqnqwv7fpdmf2yvihw18abkkmgwdnm2v3xqphp"; depends=[lme4 MASS stringr]; }; stapler = derive2 { name="stapler"; version="0.6.5"; sha256="0xhwlm3iyxxmaaf0smj8g5zdawb51d7dc636czbvk5g551g7wfdb"; depends=[matrixStats RNifti]; }; staplr = derive2 { name="staplr"; version="1.1.0"; sha256="08kk1zi89ggyli05y7lr1vhq4xszjp6z5jscaaknp38gav7jd5lc"; depends=[]; }; @@ -11255,7 +11480,7 @@ in with self; { starma = derive2 { name="starma"; version="1.3"; sha256="07r0kyabhgbm2v39fcrw0qhxcxj9a9cb45g9chzcnn9qmvramcwx"; depends=[ggplot2 Rcpp RcppArmadillo scales]; }; starmie = derive2 { name="starmie"; version="0.1.2"; sha256="06cvl8gk78c55kcf4rd27d4gfzh2lcg7ldynvx4hclvbw7ak9zdq"; depends=[combinat data_table ggdendro ggplot2 ggrepel gridExtra iterpc label_switching MCL MCMCpack proxy purrr readr stringr tidyr]; }; startR = derive2 { name="startR"; version="0.0.1"; sha256="12y57n3yip5rz4rln41896a15zv5b4c67k164282fh1p6ww9gr3r"; depends=[abind bigmemory future]; }; - startup = derive2 { name="startup"; version="0.9.0"; sha256="0cr3lp5aq93d8mk55nhfpszjkr4iv5ysm7jj7igj7yy3ag93snm0"; depends=[]; }; + startup = derive2 { name="startup"; version="0.10.0"; sha256="1j9vb1008sg6wwbz8ilxqnqzy7b18cscxiyaijszzx4ygxmcq39j"; depends=[]; }; startupmsg = derive2 { name="startupmsg"; version="0.9.4"; sha256="1r9dqrfznsrj7s11m56hkzgfnw3qcgzh07pqipl007zr2av9xwqw"; depends=[]; }; statGraph = derive2 { name="statGraph"; version="0.1.0"; sha256="13wfylb92lzw08fn3p000v87abs7ij2rb82np1rkgsl8w2kica73"; depends=[igraph MASS]; }; statar = derive2 { name="statar"; version="0.6.5"; sha256="0vmdrdq6db16vfl0rb39x8yfnbdzpcrvywfgp4lss6jby3nvjwd9"; depends=[data_table dplyr ggplot2 lazyeval matrixStats rlang stringr tidyr]; }; @@ -11280,9 +11505,10 @@ in with self; { steadyICA = derive2 { name="steadyICA"; version="1.0"; sha256="0mcalbsgajdpk45k9vpyavn079063hw4ihkw72n9wcy5nb0da14g"; depends=[clue combinat MASS Rcpp]; }; steepness = derive2 { name="steepness"; version="0.2-2"; sha256="0bw7wm7n2xspkmj90qsjfssnig683s3qwg1ndkq2aw3f6clh4ilm"; depends=[]; }; stellaR = derive2 { name="stellaR"; version="0.3-3"; sha256="098sz6b8pl3fyca3g6myp97nna368xhxf8krmibadnnsr49q5zs9"; depends=[]; }; + stellaRbase = derive2 { name="stellaRbase"; version="0.1.0"; sha256="1jwhh14wk57z8acg8vjd7m3nwq0vq4w0x9ml8zhk3gnl4czq8m04"; depends=[data_table httr RJSONIO]; }; stepPenal = derive2 { name="stepPenal"; version="0.1"; sha256="09viapb4846g91jzf9364rdyd865b19v83pwcdm3p3xsjry9ffxk"; depends=[caret dfoptim glmnet mvtnorm pROC]; }; stepPlr = derive2 { name="stepPlr"; version="0.93"; sha256="1i54nyz8z5vq3mzfh6h2vd1q0hsdazc4mhrj9ad0zdvn0qnz61lv"; depends=[]; }; - stepR = derive2 { name="stepR"; version="2.0-1"; sha256="1r45wxw9kvzyybkl4f1r9c2d7wmi0k4ji39w3nxqrf7n5kp2cnj4"; depends=[digest R_cache Rcpp]; }; + stepR = derive2 { name="stepR"; version="2.0-2"; sha256="0inxlgihyivfr0l4gk8zq0043l9s5w4r3x3hwjlzfwbqjkwy1rjs"; depends=[digest R_cache Rcpp]; }; stepp = derive2 { name="stepp"; version="3.0-11"; sha256="0jrwfvcgh3sjm3zag93kjyny2qqsyiw988vnx6jw7s31bv9g0d6s"; depends=[car survival]; }; stepwise = derive2 { name="stepwise"; version="0.3"; sha256="1lbx1bxwkf9dw6q46w40pp7h5nkxgghmx8rkpaymm6iybc7gyir2"; depends=[]; }; stheoreme = derive2 { name="stheoreme"; version="1.2"; sha256="14w3jcbs8y8cz44xlq8yybr2jwgk3w7s2msgjhlp1vazy8959s65"; depends=[]; }; @@ -11310,26 +11536,26 @@ in with self; { stpp = derive2 { name="stpp"; version="2.0-3"; sha256="18icnfrlrcibrpw7vqkrhzfx880ak24xk6llwgiqw18r929mq1hw"; depends=[ggplot2 gridExtra KernSmooth plot3D rgl rpanel spatstat splancs]; }; stppResid = derive2 { name="stppResid"; version="1.1"; sha256="0hgzsyy5y0sqd4d2agdr7p2kq0w51vs8f63dvj6j49h8cvgiws2x"; depends=[cubature deldir splancs]; }; strandCet = derive2 { name="strandCet"; version="1.0"; sha256="019cacj0g9f6i8v03rq7qyph7f14d8n0qw0axvczijvnk99q602a"; depends=[boot corpcor MASS minpack_lm mvtnorm numDeriv]; }; - stranger = derive2 { name="stranger"; version="0.3.2"; sha256="05s4dv9w8dxy2x63ai8vyh3rwphr4h59axjsh7lqa05ja06pai5z"; depends=[assertthat data_table dplyr ggplot2 tidyr]; }; + stranger = derive2 { name="stranger"; version="0.3.3"; sha256="0p0ssba5q192g7pviv1shmh1lpcdjmzdim3rp1qs3hrd1d3pn4vq"; depends=[assertthat data_table dplyr ggplot2 tidyr]; }; strap = derive2 { name="strap"; version="1.4"; sha256="0gdvx02w0dv1cq9bb2yvap00lsssklfnqw0mwsgblcy2j6fln7b0"; depends=[ape geoscale]; }; strat = derive2 { name="strat"; version="0.1"; sha256="1axxrp750kjzcgxjdqfscjmryv1mkv4l23zk8k23z8l4ymhd2f5w"; depends=[Hmisc Rcpp RcppArmadillo]; }; strataG = derive2 { name="strataG"; version="2.0.2"; sha256="1rf1xf07yb0dzasgig9sfm4i9ggdkjgy5iiysqgdapk3sxs26c8r"; depends=[adegenet ape apex copula data_table DT ggplot2 gridExtra Hmisc pegas phangorn RColorBrewer Rcpp shiny shinyFiles survival swfscMisc]; }; stratbr = derive2 { name="stratbr"; version="1.2"; sha256="15vkymmc61yz9szhfhc5663hfyqvh499ahwhr9mv1lhv5bikk0kb"; depends=[Rglpk snowfall stratification]; }; strategicplayers = derive2 { name="strategicplayers"; version="1.0"; sha256="19vijrlzawd701vvk9ig7yhzbirh39dxxcwfz8ywwvxxiaky5x55"; depends=[sna]; }; stratification = derive2 { name="stratification"; version="2.2-6"; sha256="1jlks3g8wpqlpci6v0ryyv93agiabdiklmk6ij0pc5icrfiynbhw"; depends=[]; }; + stratifyR = derive2 { name="stratifyR"; version="1.0-1"; sha256="0w135smkgryx29ppa7khpay8w04b3g2pxka0wsqlhksrp5pqa086"; depends=[actuar fitdistrplus mc2d triangle zipfR]; }; stratvns = derive2 { name="stratvns"; version="1.0"; sha256="1bw9l389lxiji4h7hrsshf24v135h6la9dg3xxjly53d4fi56ifh"; depends=[MultAlloc Rglpk sampling snowfall stratification]; }; straweib = derive2 { name="straweib"; version="1.0"; sha256="0bh2f4n4i7fiki52sa57v96757qw1gn1lcn7vgxmc5hk5rzp2mi8"; depends=[]; }; stream = derive2 { name="stream"; version="1.2-4"; sha256="1xk9lnvf9xld74z4sxbwpgxl7cbni88cjyxqzxr0r9pn9vcpwima"; depends=[animation clue cluster clusterGeneration dbscan fpc MASS mlbench proxy Rcpp]; }; - streamMOA = derive2 { name="streamMOA"; version="1.1-3"; sha256="0vgnd27xl7lgir0ps3zsz7ca2vvjg8yp28zbfvdgvm3agk7dpra7"; depends=[rJava stream]; }; + streamMOA = derive2 { name="streamMOA"; version="1.1-4"; sha256="09vspcz806j2f397hr8h685vy4xbx419bbha91f44s3bhks1y7fr"; depends=[rJava stream]; }; streamR = derive2 { name="streamR"; version="0.2.1"; sha256="1ml33mj7zqlzfyyam23xk5d25jkm3qr7rfj2kc5j5vgsih6kr0gl"; depends=[RCurl rjson]; }; streambugs = derive2 { name="streambugs"; version="1.0"; sha256="1dyh5rwi47dn584nyy7f7vg5j5nlpz7ygcl8lwkj7prahplmzg5d"; depends=[deSolve]; }; - stremr = derive2 { name="stremr"; version="0.4"; sha256="0n8ickmzjqlxwrz8dsphh1nsbnsgp4mnwm52i5ji099ps5292f65"; depends=[assertthat data_table pander R6 Rcpp rmarkdown speedglm stringr zoo]; }; stressr = derive2 { name="stressr"; version="1.0.0"; sha256="00b93gfh1jd5r7i3dhsfqjidrczf693kyqlsa1krdndg8f0jkyj7"; depends=[lattice latticeExtra XML xts]; }; strider = derive2 { name="strider"; version="1.1"; sha256="00r6gbvwmla5h27iyi7rdfd0kr4alxz19fd7g2ba0in3779za3sw"; depends=[BH Rcpp]; }; stringb = derive2 { name="stringb"; version="0.1.13"; sha256="004bp75yhrgr480v9774kfq7z5l9z0761cnrwj4yk7fxygk89a1x"; depends=[backports]; }; - stringdist = derive2 { name="stringdist"; version="0.9.4.6"; sha256="0j5b7hr53nr9xq44famkpwzi4khix93ffani5pwldqkf8bpdvhci"; depends=[]; }; + stringdist = derive2 { name="stringdist"; version="0.9.4.7"; sha256="1qg80wmcrpkba9njvgjdg15bgw7ddks40kkfh5x61as9lhchy4i4"; depends=[]; }; stringformattr = derive2 { name="stringformattr"; version="0.1.2"; sha256="0x56k30clj5ajk0qg5sr8b9l0asz6ldivwr1ddy1vp1djliih1fx"; depends=[stringr]; }; - stringi = derive2 { name="stringi"; version="1.1.6"; sha256="122im5m8x9bqpahc0hbxmvdq6hnsmgnxwwyjpvbihyv2jq5kd44m"; depends=[]; }; + stringi = derive2 { name="stringi"; version="1.1.7"; sha256="0nck1s2iglmkrn15ay2chrrwsy5lngcylz2sc87fxy5skxaahxdl"; depends=[]; }; stringr = derive2 { name="stringr"; version="1.3.0"; sha256="07dvfbkhv8gk6l32j43jvxpmqlhqp0mdby406h5a3bsc6k94ic13"; depends=[glue magrittr stringi]; }; strip = derive2 { name="strip"; version="0.1.1"; sha256="18pz6ix6d661fvg1k1yyyiiwa1gdixynmpxl725ffd9lpykmfqbw"; depends=[rlist]; }; stripless = derive2 { name="stripless"; version="1.0-3"; sha256="08mdp7kq6r5bk77j09477d1dnn7iwa346pr24b5bqsxwnbknyrsr"; depends=[lattice]; }; @@ -11343,7 +11569,7 @@ in with self; { stsm_class = derive2 { name="stsm.class"; version="1.3"; sha256="19jrja5ff31gh5k2zqhqsyd7w2ivr4s6bkliash6x8fmd22h5zs8"; depends=[]; }; stubthat = derive2 { name="stubthat"; version="1.2.1"; sha256="130naxzvswcyadwcgldvwnxxdxbfwx5vljac7901vn3ahjp75d8z"; depends=[testthat]; }; styler = derive2 { name="styler"; version="1.0.1"; sha256="01iy3p0jn57c2glq2a5wh7ds3fyxlmcjpvxnmafvvvlhca73zw88"; depends=[backports cli enc magrittr purrr rematch2 rlang rprojroot tibble withr]; }; - stylo = derive2 { name="stylo"; version="0.6.5"; sha256="15y7iwk1w9kkdhpbgbvi1cqzza4jgw8zxsp3xbqzhm4qaf4kymia"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; }; + stylo = derive2 { name="stylo"; version="0.6.6"; sha256="01kkwzhpcf6nrvbj2dgyh2a10p48gxlgq78smv5x8cn8vcfl1ixa"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; }; suRtex = derive2 { name="suRtex"; version="0.9"; sha256="0xcy3x1079v10bn3n3y6lxignb9n3h57w4hhrvzi5y14x05jjyda"; depends=[]; }; subcopem2D = derive2 { name="subcopem2D"; version="1.2"; sha256="1yrjqg3y6i5m6k0zljq1p1pciicmc1vig3qd0wxaicz708rbp3yq"; depends=[]; }; subdetect = derive2 { name="subdetect"; version="1.1"; sha256="1bcc13avs5w9vmwyf71cnjd2kwmcavmzpwyv8gvsn61n7b4j8wlk"; depends=[]; }; @@ -11352,7 +11578,7 @@ in with self; { sublime = derive2 { name="sublime"; version="1.3"; sha256="0455fppc68azxknxjvxci4kjpcj6c1jkp9adbxqrn3qnnywaj5v2"; depends=[AnalyzeFMRI downloader oro_nifti]; }; submax = derive2 { name="submax"; version="1.1.1"; sha256="0b9x55gqzw20smr3hx9izvyr0i8zv0h03hadn4c7ks7w8ga5i0kj"; depends=[mvtnorm sensitivityfull]; }; subniche = derive2 { name="subniche"; version="0.9.7"; sha256="1jsdcaf6d38j7c0ppjyilj0jd2dbpdldw6w4prmsbmx8mh7lplww"; depends=[ade4]; }; - subplex = derive2 { name="subplex"; version="1.5-2"; sha256="1v9xrnkapnq7v1jbhlg32ignklzf2vn8rqpayc8pzk8wvz53r33g"; depends=[]; }; + subplex = derive2 { name="subplex"; version="1.5-4"; sha256="10cbgbx1bgsax5z7gz6716g360xpq4mvq19cf4qqrxv02mmwz57z"; depends=[]; }; subprocess = derive2 { name="subprocess"; version="0.8.2"; sha256="1qyl8726vq94vqd6iyh9kca6wwxi3g7yv4b784wn2ifrm4waixxd"; depends=[]; }; subrank = derive2 { name="subrank"; version="0.9.9"; sha256="1z6sp9rfmpy28gpw13bh0c7y98lbbgv1cciavg3gix01whqa49n3"; depends=[]; }; subsamp = derive2 { name="subsamp"; version="0.1.0"; sha256="1bfz2z2qy1war3id8qr1asygwvwxgf2hhlh075hr6bjdkxz0j0nd"; depends=[]; }; @@ -11368,8 +11594,8 @@ in with self; { sugrrants = derive2 { name="sugrrants"; version="0.1.1"; sha256="08f5xdgimdvpivzrlwvdyrmy21nbh379pgfdrx4lxqcxd55y2hil"; depends=[dplyr ggplot2 lubridate purrr readr rlang tidyr timeDate]; }; sumFREGAT = derive2 { name="sumFREGAT"; version="1.0.0"; sha256="13g3px3c3dxacrvgwrvqdp8lm7k185npr0dlq3siq9x9mgjr7hsj"; depends=[Matrix]; }; summariser = derive2 { name="summariser"; version="0.1.0"; sha256="0a6wyb0r1i0cynld002q96ylr58jz76n5jqjz8gm6a3csjn9qss7"; depends=[dplyr ggplot2 lazyeval plotrix]; }; - summarytools = derive2 { name="summarytools"; version="0.8.2"; sha256="014hxyk0r87j5prqdckxy7h41agk2p1w1kxzl0a3pxwbj1j0r2fh"; depends=[htmltools matrixStats pander pryr rapportools RCurl]; }; - sunburstR = derive2 { name="sunburstR"; version="1.0.3"; sha256="0xxxi01klrm7kspi588n4h5zdzhph5vihs26n2x8fdm2k82jyjp9"; depends=[d3r dplyr htmltools htmlwidgets]; }; + summarytools = derive2 { name="summarytools"; version="0.8.3"; sha256="0b61131yns1ip4r5qgrfbwd6dqsgg349jfhlgfkvlszh5b9jqhnf"; depends=[htmltools matrixStats pander pryr rapportools RCurl]; }; + sunburstR = derive2 { name="sunburstR"; version="2.0.0"; sha256="1gkrgm90ps5i1k5cqdw6sbvd4jgbk4yq82gwd5m1z1jhv1shfsf4"; depends=[d3r dplyr htmltools htmlwidgets]; }; suncalc = derive2 { name="suncalc"; version="0.4"; sha256="190bnh26bl26piq6512ijrx2hygzdscryjsjyz8y4ara8bf646r3"; depends=[V8]; }; supc = derive2 { name="supc"; version="0.1"; sha256="1cq0lr04m409xr3i1hphww4ldr8z3kqq2gmp7hm3yp0iz2gy3m9a"; depends=[BH Rcpp]; }; supclust = derive2 { name="supclust"; version="1.0-7"; sha256="0437pccagvqv6ikdsgzpif9yyiv6p24lhn5frk6yqby2asj09727"; depends=[class rpart]; }; @@ -11404,21 +11630,21 @@ in with self; { survSNP = derive2 { name="survSNP"; version="0.24"; sha256="0mzwcp8zfqvsiapa446si9qb6wyymnw5zj6acj6f2cfjpyi76k4w"; depends=[foreach lattice Rcpp survival xtable]; }; surveillance = derive2 { name="surveillance"; version="1.16.0"; sha256="1nbskhbs8qfwnchig4rckbgy296ifl1hx0w3v71knj693x54r9cj"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat xtable]; }; survexp_fr = derive2 { name="survexp.fr"; version="1.0"; sha256="12rjpnih0xld4dg5gl7gwxdxmrdmyzsymm7j05v98ynldd1jkjl8"; depends=[survival]; }; - survey = derive2 { name="survey"; version="3.33"; sha256="11pmk26hirq5p7p4131crpb175hvgg4id5y5m14rskpx8nbp9l94"; depends=[lattice Matrix survival]; }; + survey = derive2 { name="survey"; version="3.33-2"; sha256="1c4q0005663b0y87ckmf1ra7gm2i5hnlw955pgb11bywh60hg9hl"; depends=[lattice Matrix survival]; }; surveybootstrap = derive2 { name="surveybootstrap"; version="0.0.1"; sha256="13rp6gj1dgdzcjbi2403pldygp1dyqx8zj0r1nvyghpi06x5gpb7"; depends=[dplyr functional plyr Rcpp RcppArmadillo stringr]; }; surveydata = derive2 { name="surveydata"; version="0.2.0"; sha256="1iwhjhazfy38dbcj224kz3zbw2nvpq01ry54wmmkg9d0n6mb02h4"; depends=[dplyr magrittr plyr purrr stringr]; }; surveyeditor = derive2 { name="surveyeditor"; version="1.0"; sha256="073219bcn1hlxl9ql6gncfvgn0m37pz5sb7h94nq6lf35dymq5zq"; depends=[]; }; surveyoutliers = derive2 { name="surveyoutliers"; version="0.1"; sha256="03nqw0zir3x57gg23hgsr2s99pv958kfsygqfwly96rvfdhr5p3v"; depends=[]; }; surveyplanning = derive2 { name="surveyplanning"; version="2.9"; sha256="0ad4122m78hbzhkkaspzpr62bl59w1j8z0qa67slqljjldhq1akv"; depends=[data_table laeken]; }; - survidm = derive2 { name="survidm"; version="1.0.0"; sha256="13iwl687g4qps6s3d8x0xr916b2ja6487dwnyqwc3nwr6gadqicw"; depends=[doParallel doRNG foreach KernSmooth np survival TPmsm]; }; + survidm = derive2 { name="survidm"; version="1.1.0"; sha256="1piwhb8zsqnw284xp0l3ajs8r9amyn8yfng19hkci574mkdgsw4f"; depends=[doParallel doRNG foreach KernSmooth np survival TPmsm]; }; survivALL = derive2 { name="survivALL"; version="0.9.2"; sha256="0mqmlmip6lr1d6i8yj4kc1zzj5jvvqrkipqxlprsrqbwni2ipp7l"; depends=[cowplot desiR ggplot2 ggthemes survcomp survival viridis]; }; - survival = derive2 { name="survival"; version="2.41-3"; sha256="07cnr0hnki6ybbjll54l4s5lllhk19vni5f8m0mvsfp99ls7qygk"; depends=[Matrix]; }; + survival = derive2 { name="survival"; version="2.42-3"; sha256="15pasbfzmg2r5bfpsadp9ia4cpybqz6n1kwm7ma02ykzf7bk4xx0"; depends=[Matrix]; }; survivalMPL = derive2 { name="survivalMPL"; version="0.2"; sha256="05bfa9fx841kh9g2jcs1dimsxkjnf4bxgamcnjpisx3a644c1gkn"; depends=[MASS survival]; }; survivalROC = derive2 { name="survivalROC"; version="1.0.3"; sha256="0wnd65ff5w679hxa1zrpfrx9qg47q21pjxppsga6m3h4iq1yfj8l"; depends=[]; }; survivalsvm = derive2 { name="survivalsvm"; version="0.0.5"; sha256="1b4hrdrqq1z0kfn8vpdwg54388m25df2s6w9i574x3mkxkmkjkga"; depends=[Hmisc kernlab Matrix pracma quadprog survival]; }; survminer = derive2 { name="survminer"; version="0.4.2"; sha256="15npx3q7xf7sl7pbb1476khgfpqrvidqcb101iim3iym125sl54r"; depends=[broom cmprsk dplyr ggplot2 ggpubr gridExtra magrittr maxstat purrr scales survival survMisc tibble tidyr]; }; survsim = derive2 { name="survsim"; version="1.1.4"; sha256="16njbqlzmk34zrh485kc0a52yacdyj9z4z4a9zcq1z5psm87c58m"; depends=[eha statmod]; }; - survtmle = derive2 { name="survtmle"; version="1.0.0"; sha256="1sdp88br1ry6yzzav67787n0clpq6vjffxqpkvld93dyvmlb6zb1"; depends=[ggplot2 Matrix plyr stringr SuperLearner tidyr]; }; + survtmle = derive2 { name="survtmle"; version="1.1.0"; sha256="0q1ym4a13xqy3lqjwg40wp28xlp1iqybwq7dd0gp6fnmx3n6373g"; depends=[dplyr ggplot2 ggsci Matrix plyr speedglm stringr SuperLearner tidyr]; }; survutils = derive2 { name="survutils"; version="1.0.1"; sha256="09844i5nfyn0fm5i8ca96xz8dza21shh2f89w41zh17xaxvidjsw"; depends=[broom dplyr ggplot2 glue lazyeval magrittr purrr survC1 survival]; }; sutteForecastR = derive2 { name="sutteForecastR"; version="0.1"; sha256="13dd0v3l3s7xb1wnpf6qvnvclzab87831z8bsxsq53vpb26xcw1b"; depends=[forecast forecastHybrid fracdiff robets]; }; svDialogs = derive2 { name="svDialogs"; version="0.9-57"; sha256="1qwnimzqz7jam3jnhpr90bgwp9zlsswy2jl17brdpsrpiwcg6jlr"; depends=[svGUI]; }; @@ -11445,11 +11671,12 @@ in with self; { svglite = derive2 { name="svglite"; version="1.2.1"; sha256="1bws3lc4hlhln11zd7lalhiyc43yk6c6vrzy41fkxk1dkjazfx51"; depends=[BH gdtools Rcpp]; }; svmadmm = derive2 { name="svmadmm"; version="0.3"; sha256="15ccda1r9cc6v30j37i052rdwxgw0wg37hwyn2vp8c7bkr0ybgkm"; depends=[kernlab]; }; svmpath = derive2 { name="svmpath"; version="0.955"; sha256="02j5xs4gg8k16imnwk6aram168cv1dqdrky3bszyc98l7xd0nlrj"; depends=[]; }; + svrpath = derive2 { name="svrpath"; version="0.1.1"; sha256="0j38m34ff5a8lqfsss8444fflprai3sgzi9kyrmingp07rx82ss5"; depends=[quadprog svmpath]; }; svs = derive2 { name="svs"; version="1.1.0"; sha256="0575msaxg04ck76mbr815m29y895qvg8b9qg4y0ggv6b1lvwp5p6"; depends=[gtools]; }; svyPVpack = derive2 { name="svyPVpack"; version="0.1-1"; sha256="15k5ziy2ng853jxl66wjr27lzc90l6i5qr08q8xgcs359vn02pmp"; depends=[survey]; }; swCRTdesign = derive2 { name="swCRTdesign"; version="2.2"; sha256="0kggniy5p900cj074swh7g47zf8bhwjmqph9b5frw86nycxwyn3v"; depends=[]; }; swa = derive2 { name="swa"; version="0.8.1"; sha256="1zy1a6c17vmdkmkwp8vv3niww2zs1m0hylsa0b2cz68vfhnmpim4"; depends=[ggplot2 reshape ROCR]; }; - swagger = derive2 { name="swagger"; version="3.4.0"; sha256="1590335n9l1s65li5018m0r3ss67ccgy10lnywxi2ypya71c58zs"; depends=[]; }; + swagger = derive2 { name="swagger"; version="3.9.2"; sha256="13scbzv65qzxh7kfwlb2k47zgvv7fz085g5lki6zr5w6a33g45q9"; depends=[]; }; swamp = derive2 { name="swamp"; version="1.3.1"; sha256="1l4rk79hbggn31y5skslqsz9bv7lmya4q5ligki3x1677345hyhv"; depends=[amap gplots impute MASS]; }; swapClass = derive2 { name="swapClass"; version="1.0.1"; sha256="0wg6km261xdywakxi64dw4wwprbrkw217q4c6622z0mgm9sjgpym"; depends=[inline]; }; swatches = derive2 { name="swatches"; version="0.5.0"; sha256="1kivscgka8gn44rjj0s5sjan1s04znnyn0nd37a74zaik0hm8zs0"; depends=[colorspace httr pack stringr xml2]; }; @@ -11460,7 +11687,7 @@ in with self; { swirlify = derive2 { name="swirlify"; version="0.5.2"; sha256="07r6rdj079ryafdgs0p8jhnk4h7iqm7agh9wjhvm12abbwjr9g1x"; depends=[base64enc readr rmarkdown shiny shinyAce stringr swirl whisker yaml]; }; switchnpreg = derive2 { name="switchnpreg"; version="0.8-0"; sha256="1vaanz01vd62ds2g2xv4kjlnvp13h59n8yqikwx07293ixd4qhpw"; depends=[expm fda HiddenMarkov MASS]; }; switchr = derive2 { name="switchr"; version="0.12.7"; sha256="1ymvghjvbrbsgn49mp8f9n4kv81626pa4pv05hrx813ly8h30mmq"; depends=[RCurl RJSONIO]; }; - swmmr = derive2 { name="swmmr"; version="0.8.0"; sha256="0cyr5x8k6agrgflqp14lxbas0yslwkz432ks71svqhdrl7dd5sg2"; depends=[dplyr purrr Rcpp readr tibble tidyr xts zoo]; }; + swmmr = derive2 { name="swmmr"; version="0.8.1"; sha256="0zl00864x9q6a2aqdbqs3b5kw6z50wgr46c62kxk9xkns8317sa7"; depends=[dplyr purrr Rcpp readr tibble tidyr xts zoo]; }; sybil = derive2 { name="sybil"; version="2.0.4"; sha256="0iyqr9iyb4bydmzjzrc721nzf5q36p2i3zciai9rzjlwx2mdw930"; depends=[lattice Matrix]; }; sybilDynFBA = derive2 { name="sybilDynFBA"; version="1.0.1"; sha256="1zyhvlzkcwnq3sh6gvi0v1crq94mr16bc5jnh0g9c8rbdl4v8r4x"; depends=[sybil]; }; sybilEFBA = derive2 { name="sybilEFBA"; version="1.0.2"; sha256="07c32xwql7sr217j8ixqd2pj43hhyr99vjdh7c106lsmqd1pifa4"; depends=[Matrix sybil]; }; @@ -11469,22 +11696,23 @@ in with self; { sylcount = derive2 { name="sylcount"; version="0.1-0"; sha256="1dxbqbjyvkg7cx234icby9fjdjz1z4l4crqd7kv8m05fv69pg224"; depends=[]; }; syllable = derive2 { name="syllable"; version="0.1.3"; sha256="1ymnczwx58h720hsm0s9zq3ddwg6gn6bgg0m8zw24i0nlivx0yjg"; depends=[data_table stringi textclean textshape]; }; sylly = derive2 { name="sylly"; version="0.1-4"; sha256="14lw5sxrdvidk0465a7x0jz74cvqjbqv0wlqdy78qzbq4ilcmcaa"; depends=[]; }; + sylly_en = derive2 { name="sylly.en"; version="0.1-3"; sha256="0jw48qin172vv7skcpvcpi9wzgav5l9afzb09hhgcxvivbz6dl93"; depends=[sylly]; }; symDMatrix = derive2 { name="symDMatrix"; version="1.0.0"; sha256="0xss7f7hkrf2afchccfavymylfybnp9nxawqxd2vdjni95kbd595"; depends=[]; }; - symbolicDA = derive2 { name="symbolicDA"; version="0.4-3"; sha256="012ha8m3137gns0q38lanpijdrqq6kcw934f2jgnxj6inl6drca0"; depends=[ade4 cluster clusterSim e1071 rgl shapes XML]; }; + symbolicDA = derive2 { name="symbolicDA"; version="0.5-3"; sha256="1zbr8b19m3fnzx0bdajl86s6aijiycjdibf9q83wd6mgpq66jb85"; depends=[ade4 cluster clusterSim e1071 rgl shapes XML]; }; symbols = derive2 { name="symbols"; version="1.1"; sha256="1234rx3divhg60p0h0zn11viqn51fm6b8876m6rip2i6z8vrg319"; depends=[shape]; }; symmoments = derive2 { name="symmoments"; version="1.2"; sha256="074k0285c0yri39zags420kjls6kjlvlhymg3r7y24h42zdy82d4"; depends=[combinat cubature multipol mvtnorm]; }; synRNASeqNet = derive2 { name="synRNASeqNet"; version="1.0"; sha256="05ncwbv8kvvhqqrxa8qq7s0jc6krs5a56ph04z50iwgd91rzyi7x"; depends=[GenKern igraph KernSmooth parmigene]; }; - synbreed = derive2 { name="synbreed"; version="0.12-6"; sha256="03h3j2g6ynnbmsc6yhbmmmrwj69jf3gjpp1wnsd02yc5kf4r1q57"; depends=[abind BGLR doBy doParallel foreach igraph lattice LDheatmap MASS qtl regress]; }; + synbreed = derive2 { name="synbreed"; version="0.12-9"; sha256="0h85z9bhzgsr783qx3zjqyi461a0q52wbqifwm3gc1kapl5irxhd"; depends=[abind BGLR doBy doParallel foreach igraph lattice LDheatmap MASS qtl regress]; }; synbreedData = derive2 { name="synbreedData"; version="1.5"; sha256="16wv9r7p0n8726qv0jlizmkvnrqwjj1q4xaxvfmj9611rm47vckx"; depends=[]; }; synchronicity = derive2 { name="synchronicity"; version="1.3.2"; sha256="1idrjzl7nkamf1ip55s6qcf64s63xs9j8z9jv3r89p6r5lw7k5mv"; depends=[BH bigmemory_sri Rcpp uuid]; }; synchrony = derive2 { name="synchrony"; version="0.2.3"; sha256="0fi9a3j8dfslf1nqx8d53fi635y3aq8isxw0dbjbpgk7rc71nzby"; depends=[]; }; synlik = derive2 { name="synlik"; version="0.1.1"; sha256="0g4n78amydihsq4jg2i9barjm9g40zczasb31fj10yn6wir1dhv7"; depends=[Matrix Rcpp RcppArmadillo]; }; synthACS = derive2 { name="synthACS"; version="1.0.1"; sha256="0jbhiadgc8f6h7ga685cm5i8y59lf76r8sgd629xfjj4jxn8ckdm"; depends=[acs data_table Rcpp]; }; - synthpop = derive2 { name="synthpop"; version="1.4-1"; sha256="0725gv7b7kj564rf0nz6djvk58i39d9vv4g12qmgnsipgjs9rsrw"; depends=[classInt foreign ggplot2 lattice MASS nnet party plyr polspline proto randomForest rpart]; }; + synthpop = derive2 { name="synthpop"; version="1.4-3"; sha256="1smibiid3hav7w9yky0n6ci160h69v16kkilmm00gady6w7j8drh"; depends=[classInt foreign ggplot2 lattice MASS nnet party plyr polspline proto randomForest rpart]; }; sys = derive2 { name="sys"; version="1.5"; sha256="0yskm5mzps4435yvld9nfp6i5lqdy5ckpdwydvvbyjznz5yv01x2"; depends=[]; }; sysfonts = derive2 { name="sysfonts"; version="0.7.2"; sha256="1jl66pyw9khi117523zanjjzdpnpgqdqx190w829xc4ljxzi8n55"; depends=[]; }; sysid = derive2 { name="sysid"; version="1.0.4"; sha256="0fr9gf5yjin3zvz850z4r4pqc1r4mwx8d46sl64i4csdm9qnqagy"; depends=[bitops ggplot2 polynom reshape2 signal tframe zoo]; }; - systemfit = derive2 { name="systemfit"; version="1.1-20"; sha256="1qzgx4hn6f71hnk70ccf6inajprrb6my5af8q2manz41577z0ka7"; depends=[car lmtest MASS Matrix sandwich]; }; + systemfit = derive2 { name="systemfit"; version="1.1-22"; sha256="19nmhidnzyk2wcwi5v28n9lkvylfw4in63vg5naqlk3w4fbwm2wb"; depends=[car lmtest MASS Matrix sandwich]; }; systemicrisk = derive2 { name="systemicrisk"; version="0.4.1"; sha256="1zimkyj58lk3iq5x4g6a76dain65j36s8c8jhx25sqjr5z2zmfsr"; depends=[lpSolve Rcpp]; }; syuzhet = derive2 { name="syuzhet"; version="1.0.4"; sha256="0wf4rls7v7h7zkq2k550d16aqvaij27iim85cwif7dkbinajfngi"; depends=[dplyr dtt NLP textshape tidyr zoo]; }; tRophicPosition = derive2 { name="tRophicPosition"; version="0.7.5"; sha256="0qmkdsl0b2aw485vpbdqxdlfwg5a3i5bj4l67xv6h51fnbyfqfiz"; depends=[ArgumentCheck coda data_table ggplot2 gridExtra hdrcde MCMCglmm plyr rjags]; }; @@ -11500,14 +11728,15 @@ in with self; { tables = derive2 { name="tables"; version="0.8.3"; sha256="1n0kqsvwx2vg7nwyz7hi708xpf2jc9bz3y84aflnzcmbspj1wvf3"; depends=[Hmisc]; }; tabplot = derive2 { name="tabplot"; version="1.3-1"; sha256="0yz3npn36q93gr0k9a4x5swap5fwxfc22b131kif3dfxkgklna06"; depends=[bit ff ffbase]; }; tabplotd3 = derive2 { name="tabplotd3"; version="0.3.3"; sha256="0mbj45vb17wlnndpkhvq7xaawsb814x7zxa4rqbfgidvbm1p3abv"; depends=[brew httpuv RJSONIO Rook tabplot]; }; - tabuSearch = derive2 { name="tabuSearch"; version="1.1"; sha256="0bri03jksm314xy537dldbdvgyq6sywfmpmj2g2acdcli31kkpq0"; depends=[]; }; + tabr = derive2 { name="tabr"; version="0.1.2"; sha256="1c9r6lx12xadv0c0068zxgx29nnf2hdbbrybm6bs27scizaxzhd2"; depends=[dplyr magrittr purrr tibble]; }; + tabuSearch = derive2 { name="tabuSearch"; version="1.1.1"; sha256="0396a8hla508na1hmyyhfbl8w10dbg810cln2xyhhvxi7rr223dj"; depends=[]; }; tabularaster = derive2 { name="tabularaster"; version="0.4.0"; sha256="1hgbynjp19xwpin31j0647ldbzxam2kmkqnvj6v8kd4svps0kr3g"; depends=[dplyr raster sp spbabel spex tibble viridis]; }; tactile = derive2 { name="tactile"; version="0.1.0"; sha256="0ygray05jlxrg7mxg412s04jrxjyskxlrl0xgxir8s6mzjg79iqy"; depends=[gridExtra lattice latticeExtra MASS RColorBrewer]; }; tadaatoolbox = derive2 { name="tadaatoolbox"; version="0.16.0"; sha256="0i69zyiqq8mc5wfc9r43dpcjhwmq4iwj605n4a6h4hma37jjnc2g"; depends=[broom car DescTools ggplot2 magrittr nortest pixiedust pwr viridis]; }; tagcloud = derive2 { name="tagcloud"; version="0.6"; sha256="04zrh029n8pjlxlr6pdd7xhqqhavbrj3fhvhj6ygzlvi2jslxnwl"; depends=[RColorBrewer Rcpp]; }; tailDepFun = derive2 { name="tailDepFun"; version="1.0.0"; sha256="1z2jrzly1adiwi8y0pndyfggpr0li6sjv9rkrc5mi47s0qjvr5qj"; depends=[copula cubature mvtnorm SpatialExtremes]; }; tailloss = derive2 { name="tailloss"; version="1.0"; sha256="0lmjgjs6d94b70i10vx66fyvlxm5swwqbcjsnqa3lmldzz6m4jc1"; depends=[MASS]; }; - tailr = derive2 { name="tailr"; version="0.1.0"; sha256="1i7dvmmqrg2hylf5n1kwr5m6xc3ydcvfi5fx2dx9zapsv9bhlr4v"; depends=[glue rlang]; }; + tailr = derive2 { name="tailr"; version="0.1.1"; sha256="07irl0fzg9skpv9kl211ar3yf68lcrpd2rcplkzbm242yb772z1v"; depends=[glue rlang]; }; tangram = derive2 { name="tangram"; version="0.3.2"; sha256="1dyfyl608k6a7vx9w0s2r6jr0y430qvkqkrrv24wav7snza4d5q2"; depends=[base64enc digest htmltools magrittr R6 stringi stringr]; }; tatoo = derive2 { name="tatoo"; version="1.1.0"; sha256="1dsycdp3vln1m1w3nhhrr60x8raw6gbihjpav0d4ad8qla2fq8nh"; depends=[assertthat colt crayon data_table magrittr openxlsx purrr rlang stringi withr]; }; tau = derive2 { name="tau"; version="0.0-20"; sha256="1inpqc2cz1vvjkmp8h3jpjvnvj0y5cwbbj92jlq0322w5w45vip9"; depends=[]; }; @@ -11515,7 +11744,7 @@ in with self; { tawny = derive2 { name="tawny"; version="2.1.6"; sha256="0s6p0nnz1rpcnn2yfj1vvl54g57d8rv5s4y09azwz1z5ls7vnnlv"; depends=[futile_logger futile_matrix lambda_r lambda_tools PerformanceAnalytics quantmod tawny_types xts zoo]; }; tawny_types = derive2 { name="tawny.types"; version="1.1.3"; sha256="1v0k6nn45rdczjn5ymsp2fqq0ijnlniyf3bc08ibd8yd1jcdyjnj"; depends=[futile_logger futile_options lambda_r lambda_tools quantmod xts zoo]; }; taxa = derive2 { name="taxa"; version="0.2.0"; sha256="16jif3s5xf4cawwkhpmjrwb0c4ycmwicrshd5m0arlkcfmq85623"; depends=[dplyr jsonlite knitr lazyeval magrittr R6 rlang stringr tibble]; }; - taxize = derive2 { name="taxize"; version="0.9.2"; sha256="15xv9j644a9zcbywx57ba6x6rsdj0pywdq58zak2fyx7c7fwpahm"; depends=[ape bold crul data_table foreach httr jsonlite natserv plyr reshape2 ritis rotl rredlist stringr tibble wikitaxa worrms xml2 zoo]; }; + taxize = derive2 { name="taxize"; version="0.9.3"; sha256="05llhgv6a440va80fs45r8q6865q45gi4z28b1ldcln0dmx77r7c"; depends=[ape bold crul data_table foreach httr jsonlite natserv plyr reshape2 ritis rotl rredlist stringr tibble wikitaxa worrms xml2 zoo]; }; taxizedb = derive2 { name="taxizedb"; version="0.1.4"; sha256="15gj9i18ysd83v9fidrrvw938dah04i10ahi3wh5dgjs5fd5ch2s"; depends=[curl DBI dbplyr dplyr hoardr magrittr RMySQL RPostgreSQL RSQLite]; }; taxlist = derive2 { name="taxlist"; version="0.1.3"; sha256="0lsphap7brl67y458x29843wkxvvf2ppjn1crz4hby7wmn1psarx"; depends=[foreign taxize vegdata]; }; taxonomizr = derive2 { name="taxonomizr"; version="0.2.2"; sha256="0drzsbr23kr3da6bawjrz8rl976mai0vcz19fr5aypsliqz32b41"; depends=[data_table R_utils RSQLite]; }; @@ -11565,9 +11794,9 @@ in with self; { texmex = derive2 { name="texmex"; version="2.4"; sha256="0s3x681f1qnbgmzi5iwqpmkfzpx9gsccd3q1vz1dppzq8fbid3c2"; depends=[ggplot2 mvtnorm]; }; texreg = derive2 { name="texreg"; version="1.36.23"; sha256="0yxaqimd7cyfrfpia6fnqm15lgs0bf5zyjzmnfm1v4qmf8kj8x6v"; depends=[]; }; text2vec = derive2 { name="text2vec"; version="0.5.1"; sha256="0vcp50mgpgxbf534vd8l56m8006i3sh8a4v9nrf9vxkq2pv7xygc"; depends=[data_table digest foreach futile_logger irlba Matrix mlapi R6 Rcpp RcppParallel sparsepp stringi]; }; - textTinyR = derive2 { name="textTinyR"; version="1.0.9"; sha256="1spzmxywzx6xk9z8jwhyab1g96rjq979zkb4sabl0sp362ccalfy"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; }; + textTinyR = derive2 { name="textTinyR"; version="1.1.0"; sha256="129ha0187vw4q5lw3xgch2k4fh9kfjrvvx2bb8bm3rd2skdhajj1"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; }; textcat = derive2 { name="textcat"; version="1.0-5"; sha256="039bzyz4jvh1hl2a2pfp328kr2mpb1a07j79yqf5cbqk3d5a197b"; depends=[slam tau]; }; - textclean = derive2 { name="textclean"; version="0.6.3"; sha256="0i6linb782257clkdpl7rv354myl9wc1417ad2glhh53lgcprfk2"; depends=[data_table english lexicon qdapRegex stringi textshape]; }; + textclean = derive2 { name="textclean"; version="0.7.2"; sha256="13g8k7i7j33g4bzqps638k0j1gyms740wyz7d0205cqm70kzz8m3"; depends=[data_table english glue lexicon mgsub qdapRegex stringi textshape]; }; texteffect = derive2 { name="texteffect"; version="0.1"; sha256="0fwcbz7bpynvcivac16z77j8d398bf7vl4l8sppi9yvg72l0k94w"; depends=[boot ggplot2 MASS]; }; textfeatures = derive2 { name="textfeatures"; version="0.1.1"; sha256="0pcs3nax21npb5blbwrmzl7q85ya8n7vgjn83z2abjr80gj3f5lj"; depends=[dplyr rlang tibble]; }; textgRid = derive2 { name="textgRid"; version="1.0.1"; sha256="1wi5vq5f7ixhz39l5hqi2jlmjjacx4lyrs4h8xfbd47pj6g16lc6"; depends=[]; }; @@ -11581,7 +11810,7 @@ in with self; { textreg = derive2 { name="textreg"; version="0.1.4"; sha256="0k7hpvvhacz29d3mvnygg6rqmh9f3ghkcp7kjmvv9jnr2ipw2j21"; depends=[NLP Rcpp tm]; }; textreuse = derive2 { name="textreuse"; version="0.1.4"; sha256="0qfp7ffzb5p3k3wiw8i1zjskni8f38rzkjnss97j9f3vhhb8j4r7"; depends=[assertthat BH digest dplyr NLP Rcpp RcppProgress stringr tidyr]; }; textshape = derive2 { name="textshape"; version="1.5.0"; sha256="0hvp3mz7j2qkw38jg9cj92ikhyic1c9w8jk07z3vh3f5cm1klvbm"; depends=[data_table slam stringi]; }; - textstem = derive2 { name="textstem"; version="0.1.2"; sha256="172y1hvxhb33syqj5y369aq7fvcyn659cx6abcz7i5na8q1v9v0l"; depends=[dplyr hunspell koRpus lexicon quanteda SnowballC stringi textclean textshape]; }; + textstem = derive2 { name="textstem"; version="0.1.4"; sha256="1pbhi5ia3w16vsix2x3if51zd2v9bcv0j4lj9hfikgq1yz9zxmw2"; depends=[dplyr hunspell koRpus koRpus_lang_en lexicon quanteda SnowballC stringi textclean textshape]; }; textutils = derive2 { name="textutils"; version="0.1-6"; sha256="0xvsd6pfg4kv40l14xcvmirqiq8rmky4s8v8diagzri3a7i45nqn"; depends=[]; }; tfdatasets = derive2 { name="tfdatasets"; version="1.5"; sha256="1ik6rzfnjmm54m7s2rvp1bq5jk0k2vl631bz3db3dk639jndiz6a"; depends=[magrittr reticulate rlang tensorflow tidyselect]; }; tfer = derive2 { name="tfer"; version="1.1"; sha256="19d31hkxs6dc4hvj5495a3kmydm29mhp9b2wp65mmig5c82cl9ck"; depends=[]; }; @@ -11598,7 +11827,7 @@ in with self; { themetagenomics = derive2 { name="themetagenomics"; version="0.1.0"; sha256="1p8qyvll6a9yx2akny1087f73r6p5zi6cf1si7b8i786bcs9khwj"; depends=[ggplot2 lda lme4 Matrix plotly Rcpp rstan scales shiny stm]; }; thermocouple = derive2 { name="thermocouple"; version="1.0.2"; sha256="1rlvhw3i83iq1vibli84gj67d98whvgkxafwpmisva1m4s1bmij4"; depends=[]; }; theseus = derive2 { name="theseus"; version="0.1.0"; sha256="1f6vl0m8fcchafn78vrfw610d0sp9rf8kd3q5n7b0zd2yby10dq0"; depends=[dplyr ggplot2 gridExtra magrittr phyloseq ShortRead splancs tidyr tidyverse vegan viridis]; }; - thgenetics = derive2 { name="thgenetics"; version="0.3-4.1"; sha256="05g5rwdpnd1b4h1lay2l1s0ns2q6a7sav8d4zrxaqgzhaafnpxyv"; depends=[]; }; + thgenetics = derive2 { name="thgenetics"; version="0.4-2"; sha256="1314gry3xs9v4jy13g08q16qy4ax3s0bc7d74gi0wbpkgdrk3lql"; depends=[]; }; thief = derive2 { name="thief"; version="0.3"; sha256="12ymkkisg5p0g1gmvlczhp4dc7mirjg55fqqmz2d90673vlg6rfq"; depends=[forecast ggplot2 hts]; }; thinkr = derive2 { name="thinkr"; version="0.11"; sha256="1rr90q91nn406n2sbn3k9q5y1mjcb4i4ixsp05mh38r9qjkbirhk"; depends=[assertthat devtools dplyr ggplot2 lazyeval lubridate magrittr ReporteRs stringi stringr tidyr XLConnect]; }; threeboost = derive2 { name="threeboost"; version="1.1"; sha256="033vwn42ys81w6z90w5ii41xfihjilk61vdnsgap269l9l0c8gmn"; depends=[Matrix]; }; @@ -11613,10 +11842,10 @@ in with self; { tibbrConnector = derive2 { name="tibbrConnector"; version="1.5.1"; sha256="1r58myi7x4hqqvyrphxy4ppa1lnad6x2ginfq2j52ax53zr07ajp"; depends=[RCurl rjson]; }; tictactoe = derive2 { name="tictactoe"; version="0.2.2"; sha256="1fx8plj5zr04xwk5hfj3zqhcknidxlzya2q14cf0m3y33a86lx42"; depends=[hash]; }; tictoc = derive2 { name="tictoc"; version="1.0"; sha256="1zp2n8k2ax2jjw89dsri268asmm5ry3ijf32wbca5ji231y0knj7"; depends=[]; }; - tidyLPA = derive2 { name="tidyLPA"; version="0.1.2"; sha256="11xc8lnhs63ykaq2g3jzrp4kz48zz03cvw5s935fvhsp05drf6g5"; depends=[dplyr forcats ggplot2 magrittr mclust purrr readr rlang stringr tibble tidyr]; }; + tidyLPA = derive2 { name="tidyLPA"; version="0.1.3"; sha256="1yk9abn21ycfdr1h43shjaymga5j9z862mp1zbwj2wbxxv6m5pp7"; depends=[dplyr forcats ggplot2 magrittr mclust purrr readr rlang stringr tibble tidyr]; }; tidyRSS = derive2 { name="tidyRSS"; version="1.2.3"; sha256="1m21cwdbhial4h3084vqs0j6zwa267ia75gyjivprqjzcccjaqdp"; depends=[dplyr httr jsonlite lubridate magrittr purrr testthat tibble xml2]; }; - tidyboot = derive2 { name="tidyboot"; version="0.1.0"; sha256="1h997hrwacm91myhy93jrinx0h715da76wm9kwz9nwwzisv62m6k"; depends=[dplyr modelr purrr rlang tidyr]; }; - tidycensus = derive2 { name="tidycensus"; version="0.4.1"; sha256="1ay6qw25r809fpgs0fsvblgsrpi91ph82mm2w21vj59gba1bkr71"; depends=[dplyr httr jsonlite purrr rappdirs readr rvest sf stringr tidyr tigris units xml2]; }; + tidyboot = derive2 { name="tidyboot"; version="0.1.1"; sha256="0nss1ci763g9p5f33g163ppamx72axc8xhrils0cql3ka8439pmn"; depends=[dplyr modelr purrr rlang tidyr]; }; + tidycensus = derive2 { name="tidycensus"; version="0.4.6"; sha256="1czfdwm5bn0xpqm43mvb5bd30m5kdxikaq21gxkj41r78z69qncl"; depends=[dplyr httr jsonlite purrr rappdirs readr rvest sf stringr tidyr tigris units xml2]; }; tidygenomics = derive2 { name="tidygenomics"; version="0.1.0"; sha256="0n6km2zhdmbgacn6rzamrn506d9y3sl6yp2q6fd9x7kzgz09aq4n"; depends=[dplyr fuzzyjoin IRanges purrr Rcpp tidyr]; }; tidygraph = derive2 { name="tidygraph"; version="1.1.0"; sha256="1cqmii1pia5s8cj1hfm5jh4qgg9dn65dcb666bqfhq51nzgwy6b4"; depends=[dplyr igraph magrittr R6 Rcpp rlang tibble tidyr]; }; tidyhydat = derive2 { name="tidyhydat"; version="0.3.3"; sha256="01l4dwsrrmfavskbqxcq5v1ykggk363nn0m0nf6ks51xdr7lckf5"; depends=[cli crayon DBI dbplyr dplyr httr lubridate rappdirs readr RSQLite tibble tidyr]; }; @@ -11629,10 +11858,10 @@ in with self; { tidyselect = derive2 { name="tidyselect"; version="0.2.4"; sha256="1592dbzawhd1hpsp9919l4sifyiaaj6xr7lnhsbwa6jwmmb0xcsw"; depends=[glue purrr Rcpp rlang]; }; tidystats = derive2 { name="tidystats"; version="0.1"; sha256="0dy4yqdc0y8pmix29100x80q828rapnq9y3qn2p6rs763c7canmr"; depends=[dplyr magrittr purrr readr tibble tidyr]; }; tidystringdist = derive2 { name="tidystringdist"; version="0.1.2"; sha256="1jk5yqkjf33arbbfgfzk7ym943gy95n3yncybmvwbjsff07qpmaw"; depends=[attempt dplyr magrittr purrr rlang stringdist]; }; - tidytext = derive2 { name="tidytext"; version="0.1.7"; sha256="1pvf46z1jiwi1j0z917mml1cg9527zkdckh8h3d1ks4wawz099a9"; depends=[broom dplyr hunspell janeaustenr Matrix purrr rlang stopwords stringr tokenizers]; }; - tidytree = derive2 { name="tidytree"; version="0.1.7"; sha256="1hf4xzdaww9vbh7ii88p43fpd8344zvqnw20ylvx58f7p82yl23b"; depends=[ape dplyr lazyeval magrittr tibble]; }; + tidytext = derive2 { name="tidytext"; version="0.1.8"; sha256="10w3h71pqbfa0n5b0a63vajc7hbwjy8bazdwmi8260zz82fvhfvl"; depends=[broom dplyr hunspell janeaustenr Matrix purrr rlang stopwords stringr tokenizers]; }; + tidytree = derive2 { name="tidytree"; version="0.1.8"; sha256="0nhhr0qmigvvzchy4pgg7pm2cn50li4zg37b4bdlhkzfzhxz4y3m"; depends=[ape dplyr lazyeval magrittr tibble]; }; tidyverse = derive2 { name="tidyverse"; version="1.2.1"; sha256="0yy3fkjksgcn6wkbgsb0pbnmsyqs4m01mziqafhig578nixs4rxd"; depends=[broom cli crayon dbplyr dplyr forcats ggplot2 haven hms httr jsonlite lubridate magrittr modelr purrr readr readxl reprex rlang rstudioapi rvest stringr tibble tidyr xml2]; }; - tidyxl = derive2 { name="tidyxl"; version="1.0.0"; sha256="1bsvxsz24qbk9wca8kh4qrb4fi22i49vpciq1pm5c48jb11bjb6b"; depends=[piton Rcpp]; }; + tidyxl = derive2 { name="tidyxl"; version="1.0.1"; sha256="10ckabv7aa744wxs3d5y9cd3a4c0x89gg91l23w7ddvcgjziq7an"; depends=[piton Rcpp]; }; tiff = derive2 { name="tiff"; version="0.1-5"; sha256="0asf2bws3x3yd3g3ixvk0f86b0mdf882pl8xrqlxrkbgjalyc54m"; depends=[]; }; tiger = derive2 { name="tiger"; version="0.2.3.1"; sha256="0xr56c46b956yiwkili6vp8rhk885pcmfyd3j0rr4h8sz085md6n"; depends=[e1071 hexbin klaR lattice qualV som]; }; tigerhitteR = derive2 { name="tigerhitteR"; version="1.1.0"; sha256="0inyi12lf8bn7nbklf2rjixk6wrgrjcp8njv7knai4dgvv7v0rfa"; depends=[Hmisc magrittr openxlsx zoo]; }; @@ -11640,8 +11869,8 @@ in with self; { tigger = derive2 { name="tigger"; version="0.2.11"; sha256="1kbqlfr3lsiiv0l7dzahna706zb4mx0gfx91220n2ckfc81pyrv5"; depends=[alakazam doParallel dplyr foreach ggplot2 iterators lazyeval tidyr]; }; tightClust = derive2 { name="tightClust"; version="1.0"; sha256="0psyzk6d33qkql8v6hzkp8mfwb678r95vfycz2gh6fky7m5k3yyz"; depends=[]; }; tigreBrowserWriter = derive2 { name="tigreBrowserWriter"; version="0.1.4"; sha256="0c733mb2fzskrfa4664w6psp80wdr5hc7f9rp516y59a8rr3xzr0"; depends=[DBI RSQLite]; }; - tigris = derive2 { name="tigris"; version="0.6.2"; sha256="0m4zramm38111rzifh0lqyly2dgdfgg5y39sns2rp8x1n0b69bc2"; depends=[dplyr httr magrittr maptools rappdirs rgdal sf sp stringr uuid]; }; - tikzDevice = derive2 { name="tikzDevice"; version="0.10-1.2"; sha256="1rwxmjwmjr1dssg9dx7rc6nz11225pz2ac9rhp8581slwzw79icl"; depends=[filehash png]; }; + tigris = derive2 { name="tigris"; version="0.7"; sha256="0azfp8ahf63a10862669wsamf0270rcyrmknc331vjs52b3qlrvl"; depends=[dplyr httr magrittr maptools rappdirs rgdal sf sp stringr uuid]; }; + tikzDevice = derive2 { name="tikzDevice"; version="0.11"; sha256="09qbwf7k2512q7yimabfr97birvspkn13hyybqsgqm1iiaiwwps3"; depends=[filehash png]; }; tilegramsR = derive2 { name="tilegramsR"; version="0.2.0"; sha256="11cnyvlghg8z7lr9ahzsjpyjrqnxqs77wdcydqvavrsqj745xvi2"; depends=[sf sp]; }; tilting = derive2 { name="tilting"; version="1.1.1"; sha256="0srvxjv3sg35n7f8pam45ny1z1dxwqjkrz9d91hf67a3fi34f5gk"; depends=[mvtnorm]; }; time2event = derive2 { name="time2event"; version="0.1.0"; sha256="1xkvarw53lcn07wqq7ly5znr6vjq7x72xb0piq5igdmwqmg2y26g"; depends=[survival timereg]; }; @@ -11664,9 +11893,9 @@ in with self; { timma = derive2 { name="timma"; version="1.2.1"; sha256="1pypk0pwkhyilh1hsn8hasia1hf6hbskj0xw6vas03k19b6fjnli"; depends=[QCA Rcpp RcppArmadillo reshape2]; }; timsac = derive2 { name="timsac"; version="1.3.6"; sha256="186919qka9j3kfpdw2gbh16n48d6xgz9lfqgk4b17f1d7l72iplg"; depends=[]; }; tinsel = derive2 { name="tinsel"; version="0.0.1"; sha256="0n1x0cf4x6cq1yks0444nxd9snga4m6inc5lfvb7k96fzjb3xgbp"; depends=[]; }; - tint = derive2 { name="tint"; version="0.0.5"; sha256="1283rik1ynnhy40lm1dipmwzihsy0pdn383k9m1yczl2fqf1qcfi"; depends=[htmltools knitr rmarkdown]; }; + tint = derive2 { name="tint"; version="0.1.0"; sha256="1hczc2nrm8xgvw3igkfnlqyz73686l447kigsrd6m796v8ny1gbf"; depends=[htmltools knitr rmarkdown]; }; tinyProject = derive2 { name="tinyProject"; version="0.5"; sha256="10sllhjcla4pfgp5n1y5vi318q9bcy82j88rx3k1sgzmbq1nc1c2"; depends=[brew devtools]; }; - tinytex = derive2 { name="tinytex"; version="0.4"; sha256="0ipmv5jrp6kkfj4m4zvhfys54x34zi15lzdxbgzmnil9lyn391zm"; depends=[]; }; + tinytex = derive2 { name="tinytex"; version="0.5"; sha256="1pg4jfyvandjwz3lmr38pbqi9d045iwkk3xklhsfhhxq6aviq9p7"; depends=[]; }; tipom = derive2 { name="tipom"; version="1.0.2-1"; sha256="1gdfv0g5dw742j6ycmi0baqh6xcchp3yf2n1g8vn7jmqgz5mlhdr"; depends=[]; }; tipr = derive2 { name="tipr"; version="0.1.1"; sha256="138xmkfad0xjrmr9v3ladbwsyknyad27wxcav03n6f72plhxmxb6"; depends=[broom purrr tibble]; }; tis = derive2 { name="tis"; version="1.34"; sha256="01bpl8q2n49wpr2gghkcv1zf16b3375xa71mv0q7wwn0da3n7m0n"; depends=[]; }; @@ -11687,12 +11916,12 @@ in with self; { tm_plugin_lexisnexis = derive2 { name="tm.plugin.lexisnexis"; version="1.3.1"; sha256="15k4bzx1p271yzskkijlf2pm6m7pb5dqxmfab9rhwynllszv96if"; depends=[ISOcodes NLP tm XML]; }; tm_plugin_mail = derive2 { name="tm.plugin.mail"; version="0.1"; sha256="0ca2w2p5zv3qr4zi0cj3lfz36g6xkgkbck8pdxq5k65kqi5ndzyp"; depends=[NLP tm]; }; tm_plugin_webmining = derive2 { name="tm.plugin.webmining"; version="1.3"; sha256="1694jidf01ilyk286q43bjchh1gg2fk33a2cwsf5jxv7jky3gl7h"; depends=[boilerpipeR NLP RCurl RJSONIO tm XML]; }; - tmap = derive2 { name="tmap"; version="1.11-1"; sha256="0day8hy210a2v2ps9pqcv4mnlx39h7dcj47hkyjsm76qlcdccv3l"; depends=[classInt htmltools htmlwidgets leaflet mapview raster RColorBrewer rgdal rgeos sp spdep tmaptools]; }; - tmaptools = derive2 { name="tmaptools"; version="1.2-3"; sha256="08m8dir5k7da72fp3hcsb055alwzpbxr2f9lxmhdbk991bmwacjr"; depends=[classInt dichromat geosphere KernSmooth magrittr osmar raster RColorBrewer rgdal rgeos rmapshaper sp spdep XML]; }; + tmap = derive2 { name="tmap"; version="1.11-2"; sha256="1cinbsfhi8pngidxp3brmba1willknavlrpjzywm85wp7973y045"; depends=[classInt htmltools htmlwidgets leaflet mapview raster RColorBrewer rgdal rgeos sp spdep tmaptools]; }; + tmaptools = derive2 { name="tmaptools"; version="1.2-4"; sha256="1dymngn3hrpky5v767lghijlbagmz57dqrkw57r0gy8a9k06bsx8"; depends=[classInt dichromat geosphere KernSmooth magrittr osmar raster RColorBrewer rgdal rgeos rmapshaper sp spdep XML]; }; tmbstan = derive2 { name="tmbstan"; version="1.0.0"; sha256="01x1nw0mlbpsldrd6hx2g040d9slrhk7hm2pm1v7pci3vxgbpgy9"; depends=[BH Rcpp RcppEigen rstan StanHeaders TMB]; }; tmcn = derive2 { name="tmcn"; version="0.2-12"; sha256="1gqmq3f0plgd44056905l5jd7x9k4ls06hcp006w8skxj1rnwzb9"; depends=[]; }; tmg = derive2 { name="tmg"; version="0.3"; sha256="0yqavibinzsdh85izzsx8b3bb9l36vzkp5a3bdwdbh410s62j68a"; depends=[Rcpp RcppEigen]; }; - tmle = derive2 { name="tmle"; version="1.3.0"; sha256="0krnf2mzxmcb105gsx1b0gpc009lv27s0brh6sa1sm87a76p6dqd"; depends=[SuperLearner]; }; + tmle = derive2 { name="tmle"; version="1.3.0-1"; sha256="1y7fjj2492a70idnqwrlcdpz2bqphdxbaz96yjxnkfhx940y26b5"; depends=[SuperLearner]; }; tmle_npvi = derive2 { name="tmle.npvi"; version="0.10.0"; sha256="00jav1ql3lv18wh9msxnjvz36z2ds44fdi6lrp1pfphh1in4vdcl"; depends=[geometry MASS Matrix R_methodsS3 R_oo R_utils]; }; tmlenet = derive2 { name="tmlenet"; version="0.1.0"; sha256="1pg9w7yci9j0m1cxi0nwdpp6jwap0b7ql4xkh25kjbq3w5r8w8pr"; depends=[assertthat data_table Matrix R6 Rcpp simcausal speedglm stringr]; }; tmod = derive2 { name="tmod"; version="0.36"; sha256="054kg3rwcmrn1y1x1ba8wflb6m76nmf69g4yj3x1vw0qjjs421nh"; depends=[beeswarm plotwidgets tagcloud XML]; }; @@ -11705,7 +11934,7 @@ in with self; { toOrdinal = derive2 { name="toOrdinal"; version="1.0-0.0"; sha256="1y46rcm6v2c5n71hdf5rgsgvy913wiazmml60mlxqb70dvz42649"; depends=[crayon testthat]; }; toaster = derive2 { name="toaster"; version="0.5.5"; sha256="0ga4l3zp422scrgvz701rjznn013vhsbp4gh7v1inqp7kpxafky9"; depends=[foreach GGally ggmap ggplot2 ggthemes memoise network plyr RColorBrewer reshape2 RODBC scales slam wordcloud]; }; togglr = derive2 { name="togglr"; version="0.1.3"; sha256="033d4mcl2w7nbjmaa5bc28skd63x34k4k4ib94nf11iwdj7bipkw"; depends=[assertthat dplyr getPass glue httr jsonlite keyring lubridate magrittr prettyunits purrr rstudioapi]; }; - tokenizers = derive2 { name="tokenizers"; version="0.1.4"; sha256="1qcsmcd74i39wql9p49g3pzc4flpi8jq9sxia5mcdx054viijgk9"; depends=[Rcpp SnowballC stringi]; }; + tokenizers = derive2 { name="tokenizers"; version="0.2.1"; sha256="006xf1vdrmp9skhpss9ldhmk4cwqk512cjp1pxm2gxfybpf7qq98"; depends=[Rcpp SnowballC stringi]; }; tolBasis = derive2 { name="tolBasis"; version="1.0"; sha256="0g4jdwklx92dffrz38kpm1sjzmvhdqzv6mj6hslsjii6sawiyibh"; depends=[lubridate polynom]; }; tolerance = derive2 { name="tolerance"; version="1.3.0"; sha256="17qh4ad1f3fbcpwlxxqh8qr9bnwjcl4yxk0l3fkbr6b2l4rc5p86"; depends=[rgl]; }; toolmaRk = derive2 { name="toolmaRk"; version="0.0.1"; sha256="0pdr8lq4c11ia03v68lbfq38p3qp770mbj0nsbjsgbqi0pv9i1vx"; depends=[dplyr ggplot2 plyr reshape2]; }; @@ -11719,6 +11948,7 @@ in with self; { tourr = derive2 { name="tourr"; version="0.5.5"; sha256="12293kp36kz056zd3fnsaf2gy4g8mcs79ws0vgbs7b0hx09sy9vp"; depends=[]; }; tourrGui = derive2 { name="tourrGui"; version="0.4"; sha256="1g9928q3x9rrd9k3k84r201wss3vjd2pngvbaflk5dqh9yf75jpq"; depends=[Cairo colorspace gWidgets RGtk2 tourr]; }; toxboot = derive2 { name="toxboot"; version="0.1.1"; sha256="0sw0mxhcq5k11swlhfpn6xk0nfsambh2yx1721zx75lya27wkmq1"; depends=[data_table tcpl]; }; + toxplot = derive2 { name="toxplot"; version="0.1.1"; sha256="1g5q04ryn2dg675yp90x36z8iw3l5js50gpm4j2c17r88jb2fsl5"; depends=[dplyr ggplot2 ggthemes tcpl tidyr]; }; toxtestD = derive2 { name="toxtestD"; version="2.0"; sha256="0b7hmpfhwg626r8il12shni0kw94cqnbj49y4vfh8gn98x1s6m48"; depends=[]; }; tpAUC = derive2 { name="tpAUC"; version="2.1.1"; sha256="0wix9qwcidj7xfqhh7bmrpnadd9qlkvg3515gaamdxkjbz2kyydc"; depends=[pROC]; }; tpe = derive2 { name="tpe"; version="1.0.1"; sha256="0zsa8vb4qmln3sb4lplv43lh50yys9vfd3rxfp6qxqqjxivd0xsh"; depends=[]; }; @@ -11729,14 +11959,14 @@ in with self; { trackdem = derive2 { name="trackdem"; version="0.3.1"; sha256="10qq9217mpd4abhkwsh4yjzpi06qpqa5rnwhxls6yzmymf9apngl"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo SDMTools shiny]; }; trackeR = derive2 { name="trackeR"; version="1.0.0"; sha256="0z200jlkgcdxwss0ckbh3vqcfw56fi7pivr9vzf4rkwyf2n6v25s"; depends=[fda ggmap ggplot2 gridExtra gtable jsonlite leaflet raster RSQLite scam XML zoo]; }; trackr = derive2 { name="trackr"; version="0.7.5"; sha256="1achrnkqnpdjp2vr1s7xsl8fdfdyifgv5vr00b3xq9pkr4jggj6z"; depends=[CodeDepends fastdigest ggplot2 gridGraphics histry htmltools knitr lattice miniUI RJSONIO rmarkdown rsolr shiny]; }; - tractor_base = derive2 { name="tractor.base"; version="3.1.0"; sha256="0d3hkxqygyh02v63wny32zdxpsn6m6q8i1630zl1mhrbvq3kmqr5"; depends=[ore reportr]; }; + tractor_base = derive2 { name="tractor.base"; version="3.2.2"; sha256="1pbh9hand7h68vxap2qis3a7zs5qkrj2wxk8flqyvhx50p98wigv"; depends=[ore reportr shades]; }; traitr = derive2 { name="traitr"; version="0.14"; sha256="1pkc8wcq55229wkwb54hg9ndbhlxziv51n8880z6yq73zac1hbmf"; depends=[digest gWidgets proto]; }; traits = derive2 { name="traits"; version="0.3.0"; sha256="155y8j69214xxi1bfk07k30zlpm3q6fmz7ydhnkvw0kv4l0i5pc5"; depends=[crul data_table hoardr httr jsonlite readr rvest taxize tibble xml2]; }; traj = derive2 { name="traj"; version="1.2"; sha256="0mq6xdbxjqjivxyy7cwaghwmnmb5pccrah44nmalssc6qfrgys4n"; depends=[cluster GPArotation NbClust pastecs psych]; }; trajectories = derive2 { name="trajectories"; version="0.1-4"; sha256="0vwfbx5s8ywasxwv8cld4s6r96vlyknxipp49rsfpqn94nawhwnx"; depends=[lattice sp spacetime]; }; trajr = derive2 { name="trajr"; version="1.0.0"; sha256="1q17lgwgxn9j3ym1vikrnnyqf61ri3vl7jqq3f1fvy2280nac0s8"; depends=[plotrix signal]; }; tram = derive2 { name="tram"; version="0.2-0"; sha256="02jbgp011qbinyjwdmj0nc2mpphmqlhm0dvvs7x2lfngrw1fw163"; depends=[basefun Formula mlt multcomp sandwich survival variables]; }; - tranSurv = derive2 { name="tranSurv"; version="1.1-4"; sha256="1vsp12x4h0s1lba1kf7n0v71kgm1dz6cjfp8lffm4ps80nahs63l"; depends=[rootSolve SQUAREM survival]; }; + tranSurv = derive2 { name="tranSurv"; version="1.1-5"; sha256="0vn3cywb331kxz6sxidprfh0lmgsmwlnzbv80bfrnahhmhmss8rl"; depends=[rootSolve SQUAREM survival]; }; transcribeR = derive2 { name="transcribeR"; version="0.0.0"; sha256="0y2kxg2da71i962fhsjxsr2ic3b31fmffhj3gg97b0nykfpcviib"; depends=[httr]; }; translate = derive2 { name="translate"; version="0.1.2"; sha256="1w0xrg1xxwfdanlammmixf06hwq700ssbjlc3cfigl50p87dbc5x"; depends=[functional lisp RCurl RJSONIO]; }; translateR = derive2 { name="translateR"; version="1.0"; sha256="11kh9hjpsj5rfmzybnh345n1gzb0pdksrjp04nzlv948yc0mg5gm"; depends=[httr RCurl RJSONIO textcat]; }; @@ -11745,15 +11975,15 @@ in with self; { transport = derive2 { name="transport"; version="0.9-4"; sha256="0ham0cla4qwfd6fqyckpdl2n2gm3qnl7ry1xi9kjvbajlcc0xwi2"; depends=[Rcpp]; }; trapezoid = derive2 { name="trapezoid"; version="2.0-0"; sha256="0f6rwmnn61bj97xxdgbydi94jizv1dbq0qycl60jb4dsxvif8l3n"; depends=[]; }; treatSens = derive2 { name="treatSens"; version="2.1.3"; sha256="159dpd4wg0i4cidg40lad665sm3j4qch8d1y3k9chwggbhcad5jn"; depends=[BH dbarts lme4 mvtnorm nlme Rcpp RcppEigen]; }; - tree = derive2 { name="tree"; version="1.0-37"; sha256="091297qhvqhgjmnyr96jkwaghz8dkbf03rnhwfhks8bsgax6jl13"; depends=[]; }; + tree = derive2 { name="tree"; version="1.0-39"; sha256="0q2dnl1hvyaw76lkfq0i9d92z68r29ssb3a9j8jknnzx896x055x"; depends=[]; }; tree_bins = derive2 { name="tree.bins"; version="0.1.0"; sha256="0cqpvh9cbnsk4qv886n2sc1v1s51z4m6aj0ydqzijvy6ckigbiij"; depends=[data_table dplyr rpart rpart_utils]; }; treeClust = derive2 { name="treeClust"; version="1.1-6"; sha256="07cw8mnfrkw733ga3aq4am1pj50g8vk0rw6b3lflnb4wdhm2fgbi"; depends=[cluster rpart]; }; - treeDA = derive2 { name="treeDA"; version="0.0.2"; sha256="0ldk7g0bfs8y0znivhj8db5si7glxawicc5zvapbf8d9djlaxxga"; depends=[ggplot2 gtable Matrix mvtnorm phyloseq reshape2 sparseLDA]; }; + treeDA = derive2 { name="treeDA"; version="0.0.3"; sha256="1m9959jya872sdkmw8hcwnjqj7r5x4h0c29g4j2rnxklbspn27j9"; depends=[ggplot2 gtable Matrix mvtnorm phyloseq reshape2 sparseLDA]; }; treebase = derive2 { name="treebase"; version="0.1.4"; sha256="1bx31jahb0wy2g8wl1z71vy659lfi8fq1sbbaxvyixzcwymix1wq"; depends=[ape httr RCurl XML]; }; treeclim = derive2 { name="treeclim"; version="2.0.0"; sha256="0hiba5xc6rp5zzka31k5klmlllpgbnla4pm920zk12jxn796953l"; depends=[abind boot ggplot2 lmodel2 lmtest np plyr Rcpp RcppArmadillo]; }; treecm = derive2 { name="treecm"; version="1.2.2"; sha256="0vrawg4vvy270dn20gb2k99xi4q89l4mjz0mm7ikpz8wxqypzq2l"; depends=[plyr]; }; treelet = derive2 { name="treelet"; version="1.1"; sha256="0k3qhxjg7ws6jfhcvvv9jmy26v2wzi4ghnxnwpjm8nh7b90lbysd"; depends=[]; }; - treeman = derive2 { name="treeman"; version="1.1.1"; sha256="0j76crs31qniibsdj7dpbbr2jdbhvclfvcscd5dgklvpcspbarch"; depends=[ape bigmemory plyr RJSONIO stringr]; }; + treeman = derive2 { name="treeman"; version="1.1.2"; sha256="0imwg4wi85gjhbhpym5gs0my8kacx28l74m5xbfwqdi4gxpz3kkc"; depends=[ape bigmemory plyr RJSONIO stringr]; }; treemap = derive2 { name="treemap"; version="2.4-2"; sha256="15bdgkdwryb55v82b3hpcx4ykfg5z7zf10h0wwknf6kl1kn34v90"; depends=[colorspace data_table ggplot2 gridBase igraph RColorBrewer shiny]; }; treemapify = derive2 { name="treemapify"; version="2.4.0"; sha256="1cg8jwlls3r3kjlmmxcm9id2spsn5ggsjrw0826ih2khdlnjc0jy"; depends=[ggfittext ggplot2 plyr]; }; treeperm = derive2 { name="treeperm"; version="1.6"; sha256="0mz7p9khrsq4dbkijymfvlwr01y4fvs0x6si4x5xid16s2zsnmm4"; depends=[]; }; @@ -11788,7 +12018,7 @@ in with self; { truncnorm = derive2 { name="truncnorm"; version="1.0-8"; sha256="0zn88wdd58223kibk085rhsikl4yhlrwiyq109hzjg06hy6lwmj9"; depends=[]; }; truncreg = derive2 { name="truncreg"; version="0.2-4"; sha256="1rmf1v2khsx82yzyyk51k7fbnbchf21lj9yqrays1z2mx3p1l1fc"; depends=[maxLik]; }; trust = derive2 { name="trust"; version="0.1-7"; sha256="013gmiqb6frzsl6fsb5pqfdapwdxas0llg954hlcvgki9al5mlg3"; depends=[]; }; - trustOptim = derive2 { name="trustOptim"; version="0.8.6.1"; sha256="07xkif11s3mdp4fmhl6zks6p2kdy4fdys2wpa8ibqpc6gd50vhvn"; depends=[Matrix Rcpp RcppEigen]; }; + trustOptim = derive2 { name="trustOptim"; version="0.8.6.2"; sha256="1nsl8jd6cna52b5dd92jw3sh84jqpg7gazskn7166bcjbph19bf7"; depends=[Matrix Rcpp RcppEigen]; }; tsBSS = derive2 { name="tsBSS"; version="0.4"; sha256="0mli9y63bp7n21wzz5gga8i0c8f3db6cdcc5jp4zm529svilzkxm"; depends=[forecast ICtest JADE Rcpp RcppArmadillo]; }; tsDyn = derive2 { name="tsDyn"; version="0.9-46"; sha256="1cq36qxpimiwlzjnnjqj5rjb3l1h684day4kch99vza1v62h1lkv"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; }; tsModel = derive2 { name="tsModel"; version="0.6"; sha256="0mkmhzj4g38ngzfcfx0zsiqpxs2qpw82kgmm1b8gl671s4rz00zs"; depends=[]; }; @@ -11802,21 +12032,22 @@ in with self; { tsdecomp = derive2 { name="tsdecomp"; version="0.2"; sha256="1wy37gjp49dr60s4zhwv19iv3mzr1fjz5yilqmqgy78j5d45ns15"; depends=[]; }; tsdf = derive2 { name="tsdf"; version="1.1-4"; sha256="0kjcfh7vrnyg2aqzr5kkzdccriy2h5x1byzhdhvyb68fi4fjf4dh"; depends=[gsDesign]; }; tsdisagg2 = derive2 { name="tsdisagg2"; version="0.1.0"; sha256="1vjypf9d4rdprpgxfsgpccn412kvar59v341ridq2hcdp7hfb70s"; depends=[]; }; - tsensembler = derive2 { name="tsensembler"; version="0.0.3"; sha256="0f4n2w18cii19ls3706cw0kc2gky2x5nh2sz92f5k2smg28dhia4"; depends=[Cubist earth forecast gbm glmnet kernlab nnet pls ranger RcppRoll softImpute xts zoo]; }; - tseries = derive2 { name="tseries"; version="0.10-43"; sha256="1yjxhj7l1p2przczl6frggfcr5iwda9lbcsmh0y75gbbbps14yf2"; depends=[quadprog quantmod zoo]; }; + tsensembler = derive2 { name="tsensembler"; version="0.0.4"; sha256="0n5mh951799yd00sbxz0ia2s086kc12rk9xmkdyjvqj8d83vh1ff"; depends=[Cubist earth forecast gbm glmnet kernlab nnet opera pls ranger RcppRoll softImpute xts zoo]; }; + tseries = derive2 { name="tseries"; version="0.10-44"; sha256="0nz6v76hsxcprpgf84al5r0p08sr9qacqal4adndz9wmg604l4ag"; depends=[quadprog quantmod zoo]; }; tseriesChaos = derive2 { name="tseriesChaos"; version="0.1-13"; sha256="0f2hycxyvcaj3s1lmva1qy46xr6qi43k8fvnm4md5qj8jp2zkazg"; depends=[deSolve]; }; tseriesEntropy = derive2 { name="tseriesEntropy"; version="0.6-0"; sha256="04clfkpkiy5p5nxcq59c7f4v1llj1d95lvck23h1px50lvb993fv"; depends=[cubature ks]; }; tsfa = derive2 { name="tsfa"; version="2014.10-1"; sha256="0gkgl55v08dr288nf8r769f96qri7qbi5src7y6azrykb37nz6iz"; depends=[dse EvalEst GPArotation setRNG tfplot tframe]; }; + tsfknn = derive2 { name="tsfknn"; version="0.1.0"; sha256="0gzij2fbgwavpsqmr7cp012lhii23fav4nsrbc2w9qingglcnqd1"; depends=[ggplot2]; }; tsgui = derive2 { name="tsgui"; version="0.0.3"; sha256="16cx68gq2f63wx7mhbv0aq6pr71wfbc035kjbjjsfrbagaq4ib13"; depends=[RandomFieldsUtils tcltk2 tkrplot]; }; tsiR = derive2 { name="tsiR"; version="0.3.0"; sha256="1brlwsbs4rac8z6cf1q3xm1apdi4ban5hj7p3qvz2yx810gbxp1d"; depends=[ggplot2 kernlab reshape2]; }; - tsibble = derive2 { name="tsibble"; version="0.1.3"; sha256="08m4k14hiab6nsqrc6qdnjvgqqngyjdv1m81dyk9v4p6l7x24rsj"; depends=[dplyr lubridate pillar purrr Rcpp rlang tibble tidyr tidyselect]; }; + tsibble = derive2 { name="tsibble"; version="0.1.5"; sha256="054vdbgndi3zr1jizjyasp33l5ifbkfcj1gs8h4bk8vvkp96nqdv"; depends=[dplyr lubridate pillar purrr Rcpp rlang tibble tidyr tidyselect]; }; tsintermittent = derive2 { name="tsintermittent"; version="1.9"; sha256="1mrb6yrsjwj6j40n97sgg42ddvwhjnaiq9k7ka249bbq01gf2975"; depends=[MAPA]; }; tsna = derive2 { name="tsna"; version="0.2.0"; sha256="09q01jzj1rnv2f2jf7djnq5xrkp7lvykdbf4bfswsy0f95j0asx2"; depends=[network networkDynamic statnet_common]; }; tsne = derive2 { name="tsne"; version="0.1-3"; sha256="0s8cv2pndkddq62rzlgzgfdjp1vjv5hz5i5957sllnb97vbzbzb6"; depends=[]; }; tsoutliers = derive2 { name="tsoutliers"; version="0.6-6"; sha256="0q4lkqasnsps8lzpiyk074nfhv29sbma080729c8l3ba1sa9pmyn"; depends=[forecast KFKSDS stsm]; }; tspmeta = derive2 { name="tspmeta"; version="1.2"; sha256="028jbbd0pwpbjq4r6jcc1h0p7c4djcb9d2mvgzw1rmpphaxjvrkd"; depends=[BBmisc checkmate fpc ggplot2 MASS splancs stringr TSP vegan]; }; tsqn = derive2 { name="tsqn"; version="1.0.0"; sha256="1iv1wwa6a9824dbgfk5a609szppc3a8j250z74hb8csjvwwx9qq9"; depends=[fracdiff MASS robustbase]; }; - tstools = derive2 { name="tstools"; version="0.3.5.1"; sha256="11n56jd4hap8bl8dicdy1zvf916jc66nkg9v2i31n6n42v5dw699"; depends=[data_table jsonlite xts zoo]; }; + tstools = derive2 { name="tstools"; version="0.3.6"; sha256="0hk98czp6ban95jw7x9bv53n44z6wlkb9gc341x5pfjhslfqccal"; depends=[data_table jsonlite xts zoo]; }; tswge = derive2 { name="tswge"; version="1.0.0"; sha256="0wj0kyb1dcwfn8wjp7skgcflc48cr4va0i0jg8x970658if7z6fz"; depends=[astsa MASS PolynomF signal waveslim]; }; tsxtreme = derive2 { name="tsxtreme"; version="0.3.1"; sha256="0cfska93ws5x11pslcdhf5rrshxzh6ddlgmfkl9zlci2rqdbwz35"; depends=[evd MASS mvtnorm]; }; ttScreening = derive2 { name="ttScreening"; version="1.5"; sha256="0qn8lkvgvqpmm368fwpqkm09yaj9mw42mjlikyiwpv2wrgbpmg9n"; depends=[corpcor limma MASS matrixStats sva]; }; @@ -11834,6 +12065,7 @@ in with self; { tumblR = derive2 { name="tumblR"; version="1.1"; sha256="0gl6q6rff9bp21gvi3bz8kmwbhimxqrv1mmzwshl1ys9r7d4dvps"; depends=[httr RCurl RJSONIO stringr]; }; tumgr = derive2 { name="tumgr"; version="0.0.4"; sha256="1ylfmrsg177g75l2scjpgw6v4dpz62r7cy89pql9zd5zqy167xqj"; depends=[minpack_lm]; }; tuneR = derive2 { name="tuneR"; version="1.3.2"; sha256="1xk66rrahfvvbjzpx2mkbmlmyj0l3vidd8kz24f72wh56gbdgbsa"; depends=[signal]; }; + tuneRanger = derive2 { name="tuneRanger"; version="0.1"; sha256="1mjq64phnphx10mrllcdy1rgm44ar8zr3ba5c4f9fpz4a5kjm7i1"; depends=[BBmisc DiceKriging lhs lubridate mlr mlrMBO ParamHelpers ranger smoof]; }; tuple = derive2 { name="tuple"; version="0.4-02"; sha256="0fm8fsdfiwknjpc20ivi5m5b19r9scdxhzij70l8qi3ixw1f0rnk"; depends=[]; }; turboEM = derive2 { name="turboEM"; version="2014.8-1"; sha256="0g9nm1m542hslz8272n5qz6h59criyf71l2w218dvq34bcjcd3yy"; depends=[doParallel foreach iterators numDeriv quantreg]; }; turfR = derive2 { name="turfR"; version="0.8-7"; sha256="007jmkppfv1x4zzvvd65fhg5k15ybjhsya2zfjgwm77wm34y81ca"; depends=[dplyr]; }; @@ -11855,15 +12087,15 @@ in with self; { twostageTE = derive2 { name="twostageTE"; version="1.3"; sha256="0mkxs3lmzja51zdrf5himhwcdygpj6czhdd2bydakm26kvw7znwr"; depends=[isotone]; }; txtplot = derive2 { name="txtplot"; version="1.0-3"; sha256="1949ab1bzvysdb79g8x1gaknj0ih3d6g63pv9512h5m5l3a6c31h"; depends=[]; }; types = derive2 { name="types"; version="1.0.0"; sha256="01shcin8wjbhbmzl979fj3008xqxssw90g3bjg42cnjxkmnaql59"; depends=[]; }; - uGMAR = derive2 { name="uGMAR"; version="2.0.0"; sha256="1qgbqqn70n5m0bw8nppzvf0gwgwic7iaidmp9xpmp4mpliybq2j0"; depends=[Brobdingnag]; }; + uGMAR = derive2 { name="uGMAR"; version="2.0.1"; sha256="038sy4blyz4dxqklk9g9r4glz0gvip84r6mb1ry4l7yh5nbii1dh"; depends=[Brobdingnag]; }; uHMM = derive2 { name="uHMM"; version="1.0"; sha256="1516ipadxi7rc1dbinr5rva2fbcr5i2zg3rlli5wy7r6naf8fzzl"; depends=[chron class cluster clValid corrplot FactoMineR HMM tcltk2 tkrplot]; }; uaparserjs = derive2 { name="uaparserjs"; version="0.1.0"; sha256="1zhz39jrvi64sj0wvwkm4y8gakfp6kz1knw4wn08kk4fa9ymyjvq"; depends=[dplyr purrr V8]; }; uavRmp = derive2 { name="uavRmp"; version="0.5.3"; sha256="05annx1vzpssxf5ycrgk2dizgl83zbwvl2x3bj8r5d8w5lvlpwrb"; depends=[brew data_table devtools gdalUtils geosphere htmltools htmlwidgets log4r maptools raster rgdal rgeos roxygen2 sf sp spatial_tools stringr zoo]; }; ubeR = derive2 { name="ubeR"; version="0.1.4"; sha256="1ilclna04hd1ykcp2b3gcj0v4qznwx0d24yavxnf2yh5d91wr6z2"; depends=[dplyr ggmap ggplot2 ggthemes googleway httpuv httr jsonlite]; }; ucbthesis = derive2 { name="ucbthesis"; version="1.0"; sha256="0l855if3a7862lxlnkbx52qa617mby634sbb2gkprj21rwd7lcbp"; depends=[knitr stringr]; }; ucminf = derive2 { name="ucminf"; version="1.1-4"; sha256="01vggwg1w71k98qs6fhb0x1843vi322mf4g3hbclks94kcpkisx2"; depends=[]; }; - udapi = derive2 { name="udapi"; version="0.1.0"; sha256="0hwnrx9qkazja288m6irmwwybiys9npk6sk60acjdczsfrn1hvl0"; depends=[curl httr]; }; - udpipe = derive2 { name="udpipe"; version="0.4"; sha256="00n4779g7idc29m7j32plqc4cnhrhhh28zmhd3lp74sxzfhi2vkb"; depends=[data_table Matrix Rcpp]; }; + udapi = derive2 { name="udapi"; version="0.1.1"; sha256="0mhkf1s7pv8d5hbianzcpc3jxps2i6y955n6bplikcz1l1pnb9ib"; depends=[curl httr]; }; + udpipe = derive2 { name="udpipe"; version="0.5"; sha256="0vbnfqbjpc27lazf96dwfp3rz0857hlbpld4hqhxkb2sqmrd17c1"; depends=[data_table Matrix Rcpp]; }; udunits2 = derive2 { name="udunits2"; version="0.13"; sha256="0yav7rm2afcx67xqrknybxgz7x63w78zyxa0xifvc0k2gz0d6mfi"; depends=[]; }; uiucthemes = derive2 { name="uiucthemes"; version="0.2.0"; sha256="1z1wx89b2d7z1a2zc4ai05v9slfpidja8f561jcsrcdi9hz2yp81"; depends=[rmarkdown]; }; ukbabynames = derive2 { name="ukbabynames"; version="0.1.1"; sha256="0vrwcf3hixd40ag6kb289anq2ys2k6vdhhsrjbizvndkyn8sr0r0"; depends=[]; }; @@ -11871,10 +12103,11 @@ in with self; { ukds = derive2 { name="ukds"; version="0.1.0"; sha256="00lgr9jy57bwa8p38mqcf4fk29g2w2wqk3pwf9av6f5lapzzgc94"; depends=[magrittr rio RSelenium stringr]; }; ukgasapi = derive2 { name="ukgasapi"; version="0.13"; sha256="0bnblha96ldbxj0nqhcj26d1dk2xm6nkjqqval1jlc2pki20mr9n"; depends=[RCurl XML]; }; ump = derive2 { name="ump"; version="0.5-8"; sha256="1sg226caq9y41cwl7wr5s9z3bpq2j5p6rj6fy2pasbzimgzw0byx"; depends=[]; }; - umx = derive2 { name="umx"; version="2.0.2"; sha256="1665h1yjs28zfpy7ziy0qnv8chm5nb5fcca1jj0cfbsspzndm24p"; depends=[cowplot DiagrammeR ggplot2 knitr MASS Matrix mvtnorm nlme numDeriv OpenMx polycor R2HTML RCurl sfsmisc xtable]; }; + umx = derive2 { name="umx"; version="2.4.0"; sha256="1i5sa6kwj57spjm1smz9835i92vs70hsq0yl7m1s0i0f3k18k3fx"; depends=[cowplot DiagrammeR ggplot2 knitr MASS Matrix mvtnorm nlme numDeriv OpenMx polycor R2HTML RCurl sfsmisc xtable]; }; unbalanced = derive2 { name="unbalanced"; version="2.0"; sha256="18hy9nnq42s1viij0a5i9wzrrfmmbf7y3yzjzymz2wnrx4f2pqwv"; depends=[doParallel FNN foreach mlr RANN]; }; unbalhaar = derive2 { name="unbalhaar"; version="2.0"; sha256="0v6bkin1cakwl9lmv49s0jnccl9d6vdslbi1a7kfvmr5dgy760hs"; depends=[]; }; - uncmbb = derive2 { name="uncmbb"; version="0.1.0"; sha256="0gkd475k4qbnfn3cgh8w4fq4g3i2fn3dlb8n89ih3xdk5ac4ns73"; depends=[]; }; + uncmbb = derive2 { name="uncmbb"; version="0.2.0"; sha256="0cvbh7a81g52hd2qzp23jwwjd5406iszf4wilgrz8sjfrfgybgfm"; depends=[dplyr rlang]; }; + understandBPMN = derive2 { name="understandBPMN"; version="1.0.0"; sha256="1rps8915r5chnagyqlr4m3jw9hfc3lgwkfnqpxfmxxl7k1dv3mnh"; depends=[dplyr purrr Rcpp tibble tidyr XML]; }; unfoldr = derive2 { name="unfoldr"; version="0.6.1"; sha256="1s1sy4x808w7nvc5kmskv7ksi2xcnfbb26qn0wkinbqma9aicqm2"; depends=[]; }; ungeneanno = derive2 { name="ungeneanno"; version="0.1.6"; sha256="0fm47vmzn4z73pn37p94r84lbkg5amk0sl78304ibwz0rhlda0y5"; depends=[httr XML]; }; uniCox = derive2 { name="uniCox"; version="1.0"; sha256="1glgk6k8gwxk3haqaswd2gmr7a2hgwjkwk2i1qc5ya7gg8svyavv"; depends=[survival]; }; @@ -11895,12 +12128,12 @@ in with self; { unrepx = derive2 { name="unrepx"; version="1.0"; sha256="1dzvwpza60y9p7kz1f0bm20wid5jyxx9pma4w41az9shq5kkr0aj"; depends=[]; }; unrtf = derive2 { name="unrtf"; version="1.2"; sha256="11q2p6cnf1pqsh8sys45gb4xf713bh693lm59d8nw09kcbm23210"; depends=[sys]; }; unsystation = derive2 { name="unsystation"; version="0.1.1"; sha256="0w5llr2kyv7g5fx5yvlyqwj4da5k5fq1f2y70c9pjdzrny9lpz4q"; depends=[doParallel foreach iterators Rcpp RcppArmadillo]; }; - untb = derive2 { name="untb"; version="1.7-2"; sha256="1ha0xj94sz1r325qb4sb5hla9hw1gbqr76703vk792x9696skhji"; depends=[Brobdingnag partitions polynom]; }; + untb = derive2 { name="untb"; version="1.7-3"; sha256="1324gn42qxw4cf3jg9vd8nwxiw4w4fg6p2xhzmn636q5wlziln5c"; depends=[Brobdingnag partitions polynom]; }; unvotes = derive2 { name="unvotes"; version="0.2.0"; sha256="0wanvivwm1nmqadq2vapg27kasnjnr0a4np2kw54wj9pg21izqic"; depends=[]; }; upclass = derive2 { name="upclass"; version="2.0"; sha256="0jkxn6jgglw6pzzbcvi1pnq4hwfach3xbi13zwml4i83s3n5b0vg"; depends=[mclust]; }; uplift = derive2 { name="uplift"; version="0.3.5"; sha256="11xikfmg6dg8mhwqq6wq9j9aw4ljh84vywpm9v0fk8r5a1wyy2f6"; depends=[coin MASS penalized RItools tables]; }; upmfit = derive2 { name="upmfit"; version="0.1.0"; sha256="0f0rk606v17abgw3mwlwihl6fsxprp44h2xbhv1675i18i36vbgx"; depends=[mcmcplots R2jags]; }; - uptasticsearch = derive2 { name="uptasticsearch"; version="0.1.0"; sha256="0kr9lmfp5fa3rcmk0s56pgr4h2pabic17m9yv2sljg7cvx50iss6"; depends=[data_table futile_logger httr jsonlite purrr stringr uuid]; }; + uptasticsearch = derive2 { name="uptasticsearch"; version="0.2.0"; sha256="09vc26vpghc5lwlchmn7h8khy7s0jhcb8lqd1asr5l178kfpv3w8"; depends=[data_table futile_logger httr jsonlite purrr stringr uuid]; }; uptimeRobot = derive2 { name="uptimeRobot"; version="1.0.0"; sha256="1sbr0vs6jqcyxjbs7q45bsfdnp3bc59phw0h3fwajqq1cxjgzdww"; depends=[plyr RCurl rjson]; }; upwaver = derive2 { name="upwaver"; version="1.0.1"; sha256="0pl5r1rh91s8i74zrsrblp6mjn371a2lp01f5d37d1vnjxc3dn9n"; depends=[assertthat httr rjson XLConnect]; }; uqr = derive2 { name="uqr"; version="1.0.0"; sha256="0f7isjfb5almp1zypxzw3lfkygkcixmg0xdsw0zznf61r6qhbqyr"; depends=[gtools Hmisc]; }; @@ -11913,6 +12146,7 @@ in with self; { useful = derive2 { name="useful"; version="1.2.3"; sha256="016fwnjrnq44m71jmiy8cpzncja77pii2ag2ir85jdk4fzgckn7l"; depends=[dplyr ggplot2 magrittr Matrix plyr purrr scales]; }; userfriendlyscience = derive2 { name="userfriendlyscience"; version="0.7.0"; sha256="14wdy74mj9rzlpmrsy3b4fda5f2sx078w1k1lgahz0yra3bypl3k"; depends=[BiasedUrn car data_tree DiagrammeR digest diptest fBasics GGally ggplot2 ggrepel ggridges GPArotation gridExtra gtable knitr lavaan lme4 MASS MBESS minpack_lm pander plyr psych pwr RColorBrewer rio scales SCRT SuppDists viridis XML xtable]; }; usethis = derive2 { name="usethis"; version="1.3.0"; sha256="0r61pf8qisjvrshm6jpcb76ck1v79s7lg9zwdgad4fasyyrzrcx2"; depends=[backports clipr clisymbols crayon curl desc gh git2r httr rematch2 rmarkdown rprojroot rstudioapi styler whisker]; }; + usfertilizer = derive2 { name="usfertilizer"; version="0.1.5"; sha256="05zjn39hqjjzzp4v4b1zbqq59205s7k0kikms951h57kbyvjz6vk"; depends=[tidyverse]; }; uskewFactors = derive2 { name="uskewFactors"; version="2.0"; sha256="0ndi5987ak8sa7krgiglsibfg0k7z9j8fg47hg1m8ar0sq4r1yj6"; depends=[MASS MCMCpack mvtnorm tmvtnorm]; }; usl = derive2 { name="usl"; version="1.8.0"; sha256="04w7p9i08a51smgg11kh4hablic5rjmr5hndrnlg49j5h20i7w1v"; depends=[nlsr]; }; usmap = derive2 { name="usmap"; version="0.2.1"; sha256="0ilg8fzrxpljdly8xkniirqa3lw74kfark75pv071aa4l6xkiwlg"; depends=[]; }; @@ -11921,19 +12155,19 @@ in with self; { utf8latex = derive2 { name="utf8latex"; version="1.0.4"; sha256="12isrl056h7y7nr7wk52dnvf3frcp66qqy7si869ark2aj81f959"; depends=[]; }; utility = derive2 { name="utility"; version="1.4.2"; sha256="0q08yc0sxbcjhsr0nkgc2pyxkd93zwlbf0jyq21cf535mj4036gq"; depends=[]; }; utilsIPEA = derive2 { name="utilsIPEA"; version="0.0.5"; sha256="1kllm94c23pb176nazcfgsv38aawbzdwqdhyxx1c1n1jlsls2zk6"; depends=[data_table dplyr RCurl stringdist stringr]; }; - utiml = derive2 { name="utiml"; version="0.1.3"; sha256="08r2qfvxlz50jzvhl0k9pvzf9xs8jm838bv9ncg59ir1b3ijbkk5"; depends=[mldr]; }; + utiml = derive2 { name="utiml"; version="0.1.4"; sha256="1z93a7ldgkab6hsa9a0hzyhxsbac45sgqn7fy2jh615d2kw7pqr1"; depends=[mldr]; }; uuid = derive2 { name="uuid"; version="0.1-2"; sha256="1gmisd630fc8ybg845hbg13wmm3pk3npaamrh5wqbc1nqd6p0wfx"; depends=[]; }; - uwIntroStats = derive2 { name="uwIntroStats"; version="0.0.4"; sha256="1kkmi2dqd2f4jryrkf9br4m6p7qxknlg62xyw28nirs4a12h52w8"; depends=[Exact geepack plyr sandwich survival]; }; + uwIntroStats = derive2 { name="uwIntroStats"; version="0.0.5"; sha256="0zsbznvhnxihpxbkw3z4mywc66qx9qfxa0bz6748h19c885hjw01"; depends=[Exact geepack plyr sandwich survival]; }; vaersNDvax = derive2 { name="vaersNDvax"; version="1.0.4"; sha256="0hvw7vbxs87c9xkdv3617fkjwz2dbawscbd7dgaixhdhcr3k823a"; depends=[]; }; vaersvax = derive2 { name="vaersvax"; version="1.0.4"; sha256="15znkwbhr624qgwlcrdhaxpdfl85ym845mr2sy8b016d3ngz7n94"; depends=[]; }; vagalumeR = derive2 { name="vagalumeR"; version="0.1.1"; sha256="1l1p63yhwqvkh8kgqii9n96vdm86jfc64nrinjp5l7jhx99sn013"; depends=[httr jsonlite plyr stringr]; }; valaddin = derive2 { name="valaddin"; version="0.1.2"; sha256="0j1c3g9gn2j0manz3jjh58cnl7b1rfwm9494xqrfqpia8948p9vq"; depends=[lazyeval purrr]; }; valection = derive2 { name="valection"; version="1.0.0"; sha256="0104zcg3cw57ksgmb321hnyv095mn3frxci9vikj1smwarpnrpzc"; depends=[testthat]; }; validann = derive2 { name="validann"; version="1.2.1"; sha256="00c0hkjiv8n7mksx6sknb4xkkivxr1ml31k697csv4imwrk09dy5"; depends=[moments]; }; - validate = derive2 { name="validate"; version="0.2.0"; sha256="178paxywwiaa45pqhknpw2k6f08b35nlnhwvqv2d1d289fz4f6qh"; depends=[settings yaml]; }; + validate = derive2 { name="validate"; version="0.2.4"; sha256="0dg6jkc3g42fj0dx1m868v7p7jmxfdgihal9jmzphysyl36z8fp7"; depends=[settings yaml]; }; validateRS = derive2 { name="validateRS"; version="1.0.0"; sha256="1ivw9ddr6z2wrsqvhbn87p5pikhkxlz8p45pb5nq13dvs359vkww"; depends=[data_table reshape2 triangle truncnorm]; }; validatejsonr = derive2 { name="validatejsonr"; version="1.0.4"; sha256="1n8jf7j3hvz47z1x3gqz5yj5wxfjzz0zgzkgckdvy1nbsqf7w3cr"; depends=[Rcpp]; }; - validatetools = derive2 { name="validatetools"; version="0.4.1"; sha256="1ivwgva37j26csvp4w3w7d10yq6myqdg6gcgxrl9z8j3gldnzv7p"; depends=[lpSolveAPI validate]; }; + validatetools = derive2 { name="validatetools"; version="0.4.3"; sha256="1v6mmk3iq5nzzjkkj1spiqfmqq2133xg2qyy3y8h4pwwfynp4v7c"; depends=[lpSolveAPI validate]; }; valorate = derive2 { name="valorate"; version="1.0-1"; sha256="06vczszpkipsxfs7h6ld33vvxb5ci62rwg3cglwy3lcfifhbnsfi"; depends=[survival]; }; valottery = derive2 { name="valottery"; version="0.0.1"; sha256="0rlv8agm9ng4jcb9ixqifh7kjczvkx7047brq8yf9kg7rb8mzgpz"; depends=[]; }; valr = derive2 { name="valr"; version="0.4.0"; sha256="1km828lif5nh15fxc3kbk3xp14gmsd6f3n0g5ml9zbdimh9n990z"; depends=[BH bindrcpp broom dplyr ggplot2 plogr Rcpp readr rlang stringr tibble]; }; @@ -11954,7 +12188,7 @@ in with self; { vbsr = derive2 { name="vbsr"; version="0.0.5"; sha256="1avskbxxyinjjdga4rnghcfvd4sypv4m39ysfaij5avvmi89bx3b"; depends=[]; }; vcd = derive2 { name="vcd"; version="1.4-4"; sha256="1lp99h0wvsc61l1dgcqjxdrcgpgw88ak430cdsv43kmm43qssqd5"; depends=[colorspace lmtest MASS]; }; vcdExtra = derive2 { name="vcdExtra"; version="0.7-1"; sha256="163x9hhvhgdmrqbcig7b120lk63svy0y652scbrcb11f85zrgb0c"; depends=[ca gnm MASS vcd]; }; - vcfR = derive2 { name="vcfR"; version="1.7.0"; sha256="1vx4s5z8h8mk8gqra2a5mkapz5xv1im76klq8qkpvj6ic4wcwsxs"; depends=[ape dplyr magrittr memuse pinfsc50 Rcpp stringr tibble tidyr vegan viridisLite]; }; + vcfR = derive2 { name="vcfR"; version="1.8.0"; sha256="1684lamsivwaqzvmwzhrrziwczkaqn3mhbdr86zbjdhr1jcgkz2z"; depends=[ape dplyr magrittr memuse pinfsc50 Rcpp stringr tibble vegan viridisLite]; }; vcov = derive2 { name="vcov"; version="0.0.1"; sha256="1w89mr8dk6436bxap28rszajgm9k7sjfqsr1i4p68dlhw8zk4yq1"; depends=[]; }; vcrpart = derive2 { name="vcrpart"; version="1.0-2"; sha256="1xfvsxgyf39d2qxnm40nzkqp7q12y8nbpn9h154n876zxxfs7gh1"; depends=[formula_tools nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; }; vdg = derive2 { name="vdg"; version="1.2.0"; sha256="1hi5d14nh9q784sbdk018awrawh9f1aix0wl26x7n0xb4707rcmy"; depends=[ggplot2 gridExtra proxy quantreg]; }; @@ -11964,7 +12198,7 @@ in with self; { veccompare = derive2 { name="veccompare"; version="0.1.0"; sha256="03nyyxvhhwfxxg5w6qflk7q234ipbhj9fd4abcp50sxz3diabch1"; depends=[corrplot gtools pander purrr qgraph reshape2 VennDiagram]; }; vecsets = derive2 { name="vecsets"; version="1.2.1"; sha256="086af6swjpbkd140yvb76affy5gn4p9xm41m3akm8axc3qk0hybg"; depends=[]; }; vegalite = derive2 { name="vegalite"; version="0.6.1"; sha256="0dlzhvrg3nj6knyycdgg3d1vzq3dn9vxb34fjin9hzilszqmarbk"; depends=[base64 clipr digest htmltools htmlwidgets jsonlite magrittr webshot]; }; - vegan = derive2 { name="vegan"; version="2.4-6"; sha256="175mqr42mmxy98gpf3rky8alnkw3w1k90ggdw3cispl36841p76w"; depends=[cluster lattice MASS mgcv permute]; }; + vegan = derive2 { name="vegan"; version="2.5-1"; sha256="0pynr02d1xngda6c3va8fc4nxpgfkawhzcnz1ws4dnarp9b1w90r"; depends=[cluster lattice MASS mgcv permute]; }; vegan3d = derive2 { name="vegan3d"; version="1.1-1"; sha256="1jd9m2immkhgb1zr39gsgl746y7qpi5fhj8awmqq5lyr5j6jp6jh"; depends=[cluster rgl scatterplot3d vegan]; }; vegclust = derive2 { name="vegclust"; version="1.7.1"; sha256="1k1dcw424s19f8ngsksvdmsayahl1hkxd9v2irf8ljpp688l8idi"; depends=[Rcpp sp vegan]; }; vegdata = derive2 { name="vegdata"; version="0.9.1"; sha256="0w4dk7qcl89w04qgnlna5lk5hxnyrvwmgjjxmnvb6r5dspq7qyad"; depends=[foreign httr jsonlite XML]; }; @@ -11975,7 +12209,7 @@ in with self; { velox = derive2 { name="velox"; version="0.2.0"; sha256="1jrarfsfflvpc0dqh5gnw92fk8zic222n7pr7hd0lhr5d389k6d0"; depends=[BH raster Rcpp rgdal rgeos sf sp]; }; vembedr = derive2 { name="vembedr"; version="0.1.3"; sha256="0zg6j0g9l7j36ifwabhxrin5z0dics66bqkc7x6rqijmizk1xpba"; depends=[htmltools httr magrittr stringr]; }; venn = derive2 { name="venn"; version="1.5"; sha256="0mb8864kmn98184q007jnn7cydh02sx8bh1mhsskycmi70c8w8ai"; depends=[]; }; - vennLasso = derive2 { name="vennLasso"; version="0.1.1"; sha256="1xlf60xjvk0xq96mgzkj65q21mjk2k274xkcwsfmgir9xfdq60rd"; depends=[foreach igraph MASS Matrix Rcpp RcppEigen RcppNumerical survival VennDiagram visNetwork]; }; + vennLasso = derive2 { name="vennLasso"; version="0.1.2"; sha256="1lma34msdl8ik0375bh4adbfgvcy0crv29gpsk7p6x75464jsp9y"; depends=[foreach igraph MASS Matrix Rcpp RcppEigen RcppNumerical survival VennDiagram visNetwork]; }; venneuler = derive2 { name="venneuler"; version="1.1-0"; sha256="10fviqv9vr7zkmqm6iy2l9bjxglf2ljb7sx423vi4s9vffcxjp17"; depends=[rJava]; }; vennplot = derive2 { name="vennplot"; version="1.0"; sha256="0x59awa1zsjwk5qb1jzv6d2mn2fm4aq1lq8zlbnf1da0h4837yab"; depends=[Rcpp rgl stringr]; }; verification = derive2 { name="verification"; version="1.42"; sha256="0pdqvg7cm9gam49lhc2xy42w788hh2zd06apydc95q2gj95xnaiw"; depends=[boot CircStats dtw fields MASS]; }; @@ -11983,7 +12217,7 @@ in with self; { vertexenum = derive2 { name="vertexenum"; version="1.0.1"; sha256="060sfa22m35d1hqxqngxhy7bwjihf6b4sqa1kg5r0cqvdw9zg51d"; depends=[numbers]; }; vesselr = derive2 { name="vesselr"; version="0.2.1"; sha256="1wzprnpiv04gxhqgki36gp1a0xj9l3mchllphwkfsdja4axq3prk"; depends=[oro_nifti pbapply pbmcapply]; }; vetools = derive2 { name="vetools"; version="1.3-28"; sha256="1470xgqdq9n5kj86gdfds15k3vqidk3h99zi3g76hhyfl8gyl1c0"; depends=[lubridate maptools plyr scales sp stringr tis xts]; }; - vetr = derive2 { name="vetr"; version="0.2.3"; sha256="1b35j8zzaj626dgz34hlprgsplnnskpl6zw3vppw27nnds7fdlh8"; depends=[]; }; + vetr = derive2 { name="vetr"; version="0.2.4"; sha256="16v31qkbn6nbng00465z6990n2hwzrv5i4m3ifv3ysfq28jnd28a"; depends=[]; }; vfcp = derive2 { name="vfcp"; version="1.4.0"; sha256="0zj1ihqdx5x1695al1xyi8k001yw8x7gdss72myxlnh7b4flnp9m"; depends=[copula extraDistr stringr]; }; vhica = derive2 { name="vhica"; version="0.2.4"; sha256="0km49lrzn9rm3wxadwxc290dvx3bsblbmna7f9lnkq6g1z5jdqwg"; depends=[]; }; vietnamcode = derive2 { name="vietnamcode"; version="0.1.1"; sha256="0vc0c1fg30afar2dkch5h27b8jbglcd9ja6d5hcypnibqz4c68vz"; depends=[]; }; @@ -11992,14 +12226,14 @@ in with self; { vioplot = derive2 { name="vioplot"; version="0.2"; sha256="16wkb26kv6qr34hv5zgqmgq6zzgysg9i78pvy2c097lr60v087v0"; depends=[sm]; }; viopoints = derive2 { name="viopoints"; version="0.2-1"; sha256="0cpbkkzm1rxch8gnvlmmzy8g521f5ang3nhlcnin419gha0w6avf"; depends=[]; }; vipor = derive2 { name="vipor"; version="0.4.5"; sha256="112gc0d7f8iavgf56pnzfxb7hy75yhd0zlyjzshdcfbnqcd2a6bx"; depends=[]; }; - viridis = derive2 { name="viridis"; version="0.5.0"; sha256="1ka6amybgzqkg3cbwfxwwqzzzpfn6q5jcia5am0bw48y5hbpg97y"; depends=[ggplot2 gridExtra viridisLite]; }; + viridis = derive2 { name="viridis"; version="0.5.1"; sha256="060rf1jn29dq53y3nhb0hykvcap6rqsk04rq544ypiiqb18ngwnx"; depends=[ggplot2 gridExtra viridisLite]; }; viridisLite = derive2 { name="viridisLite"; version="0.3.0"; sha256="1by2l05f0yabwvv64lhnv7bbhx0w683s3wr9j2xda920ghpa23kq"; depends=[]; }; virtualspecies = derive2 { name="virtualspecies"; version="1.4-2"; sha256="19qw8vqf08x6fgm8w159qabpgr2wv2cxishpj6888ihcaa9ykp8f"; depends=[ade4 dismo raster rworldmap]; }; virustotal = derive2 { name="virustotal"; version="0.2.1"; sha256="0lky75al8zcvmfgx7a2s3bij8ya4avdsnv046lk7564zfd8rbymw"; depends=[httr plyr]; }; visNetwork = derive2 { name="visNetwork"; version="2.0.3"; sha256="0bs6war8m6vnzyhmzfmry5sfc5v1crq8i8r8nn70shf19k7pabmw"; depends=[htmltools htmlwidgets jsonlite magrittr]; }; visdat = derive2 { name="visdat"; version="0.1.0"; sha256="1r009jlg3wwg06j5066c09567q24986c74f0cd68kcbmihaxngbx"; depends=[dplyr ggplot2 magrittr purrr tidyr]; }; visreg = derive2 { name="visreg"; version="2.5-0"; sha256="0n19k6rsmpqga6r8lyhjviqs3nw881dhr211621m2cl7knqhhi4y"; depends=[lattice]; }; - vistime = derive2 { name="vistime"; version="0.4.0"; sha256="0fahih28q7lyywnm4mri9macdx4c5b3c5djmg557f7dxlyhhjw0l"; depends=[plotly RColorBrewer]; }; + vistime = derive2 { name="vistime"; version="0.5.0"; sha256="1h7dm66m0qx3hmfx1hlv5na65swdhdykyg1fsqzgnjl6p98cg81j"; depends=[plotly RColorBrewer]; }; visualFields = derive2 { name="visualFields"; version="0.4.3"; sha256="0ws3cz71hhhrf4xkdb644li04d31wf51xb2sq789bl2lf50q6a1a"; depends=[flip gridBase Hmisc matrixStats]; }; visualize = derive2 { name="visualize"; version="4.3.0"; sha256="1s49sx828f25d4n93mn28xdbc81zflk2sr3h8ffs2mkjr888qd8y"; depends=[]; }; visvow = derive2 { name="visvow"; version="0.1.0"; sha256="0nb849m6dqfanqlaqcargw0rlf4ch9v09zmf0zqmxkwcil0w0dka"; depends=[Cairo DT ggplot2 plot3D plyr pracma psych Rdpack readxl shiny shinyBS svglite WriteXLS]; }; @@ -12014,6 +12248,7 @@ in with self; { vortexRdata = derive2 { name="vortexRdata"; version="1.0.3"; sha256="1pq910xaqk6d5amg8hj7xagb5wn2ahfrmqairf3vhwqx55lhjbg1"; depends=[]; }; vote = derive2 { name="vote"; version="1.1-0"; sha256="1kxbv4062g4x9vn4gh74c6zwdshysw5n7vx9qljhq2wrdnqzjpyg"; depends=[formattable knitr]; }; voteogram = derive2 { name="voteogram"; version="0.2.0"; sha256="0m4j7iz7mc6z536vk0kmqfd8ank87ingv5vnjl7mn62r53c5fbsf"; depends=[dplyr ggplot2 jsonlite scales]; }; + votesys = derive2 { name="votesys"; version="0.1.0"; sha256="1y86411khvn8yz0q75ky9ic7n8a11jckmpamj56h9cl5yh1rbm9w"; depends=[data_table]; }; vottrans = derive2 { name="vottrans"; version="1.0"; sha256="1fp7jrw072ws39bqsg88bm2qndcv68aa2vdqwgnza58p1dfq3x9f"; depends=[quadprog]; }; vowels = derive2 { name="vowels"; version="1.2-2"; sha256="0xhfn3avx9h6kg3jwd47n2x7w8q8c9h13wsxd74hhbbn2gkjrs84"; depends=[]; }; vows = derive2 { name="vows"; version="0.5"; sha256="06akjdbab9v7r47di7syvcm7gf4k81djizg8maszs5l1ksyhmv6b"; depends=[fda gamm4 mgcv oro_nifti RLRsim shape stringr]; }; @@ -12024,6 +12259,7 @@ in with self; { vrmlgen = derive2 { name="vrmlgen"; version="1.4.9"; sha256="0lifhhf41yml4k83wpkssl14jgn8jaw1lcknwbci1sd8s1c4478l"; depends=[]; }; vrtest = derive2 { name="vrtest"; version="0.97"; sha256="00hdgb0r18nwv3qay97b09kqqw9xqsbya06rrjyddqh9r6ggx1y0"; depends=[]; }; vscc = derive2 { name="vscc"; version="0.2"; sha256="1p14v8vd8kckd44g4dvzh51gdkd8jvsc4bkd2i4csx8vjiwrni5w"; depends=[mclust teigen]; }; + vstsr = derive2 { name="vstsr"; version="1.0.0"; sha256="0flsw5yw1vmj5x866klxmjqz5aimkvjiwl1zdciz63p9zffmb4gz"; depends=[httr jsonlite magrittr R6 RCurl xml2]; }; vtreat = derive2 { name="vtreat"; version="1.0.3"; sha256="04kicd7jxvcnvd0n9ssxv3jsi075wass30l3jg0ikdr3kc899vfs"; depends=[]; }; vudc = derive2 { name="vudc"; version="1.1"; sha256="0zxz6n3ixa3xjzcinky8ymqjx9w8y8z65mz8d84dl00mxzkmkz4h"; depends=[]; }; vwr = derive2 { name="vwr"; version="0.3.0"; sha256="1h790vjcdfngs1siwldvqz8jrxpkajl3266lzadfnmchfan1x7xv"; depends=[lattice latticeExtra stringdist]; }; @@ -12046,7 +12282,7 @@ in with self; { walmartAPI = derive2 { name="walmartAPI"; version="0.1.5"; sha256="1nng8izncj2nmmpywn1ggpzvjh8q7y3q6260qhy9kbmvrrl26spf"; depends=[dplyr glue httr magrittr purrr stringr tibble]; }; walrus = derive2 { name="walrus"; version="1.0.1"; sha256="032s2k122z5cqkcjvh9gva4vvmj5prn6z3rs8j5y16d98kgambpy"; depends=[ggplot2 jmvcore R6 WRS2]; }; wand = derive2 { name="wand"; version="0.2.0"; sha256="1p2r96nyr36jv418xi4j2ldarymb4xmpis6d2iz7mq9755kb4fnh"; depends=[dplyr purrr rappdirs Rcpp stringi tibble tidyr]; }; - warbleR = derive2 { name="warbleR"; version="1.1.10"; sha256="0xwzrl08zvq4r280adz50rvr304i391l0g8m90dd5cdwxmfn071x"; depends=[bitops doParallel dtw fftw foreach iterators jpeg maps monitoR NatureSounds pbapply pbmcapply proxy RCurl rjson seewave signal tuneR]; }; + warbleR = derive2 { name="warbleR"; version="1.1.12"; sha256="1fb1pni00gphhwxzq75y5lbjqpyapc5vpqbbi2vq841dpn2jkcwm"; depends=[bitops doParallel dtw fftw foreach iterators jpeg maps monitoR NatureSounds pbapply pbmcapply pracma proxy RCurl rjson seewave signal Sim_DiffProc tuneR]; }; warpMix = derive2 { name="warpMix"; version="0.1.0"; sha256="13zbl4aifhg7j5b3vpwgzgs09hr7yblz0rckmj5qh40s78j8cpfn"; depends=[fda fields lme4 MASS nlme reshape2]; }; washdata = derive2 { name="washdata"; version="0.1.2"; sha256="01cnlhymh3qg9c7fda8s6lvm4j2vklmb72dfk17sn4p0kkikf9m8"; depends=[]; }; wasim = derive2 { name="wasim"; version="1.1.2"; sha256="1zydzw7cihhdwv0474fnc4lgaq5fwrv8jinz79vkbidbgcy7i2fd"; depends=[fast MASS qualV tiger]; }; @@ -12054,7 +12290,7 @@ in with self; { waterData = derive2 { name="waterData"; version="1.0.8"; sha256="0884agh876wf3qlbc75fbaa47x2iwvncz7r2l25qw34n8lxq1yr6"; depends=[dataRetrieval lattice latticeExtra lubridate xml2]; }; waterfall = derive2 { name="waterfall"; version="1.0.2"; sha256="0jy6l9mx0dixwnkychdl18sf4xh73pm0qd1jyxp9rlnv1vcragjp"; depends=[lattice]; }; waterfalls = derive2 { name="waterfalls"; version="0.1.2"; sha256="01gby1mlhrwcalizpywxcakkx2zifswb0188nrl6z9dkkd1866lm"; depends=[ggplot2]; }; - waveband = derive2 { name="waveband"; version="4.6"; sha256="1y2qi2zb8l2ap6f8ihnpq2yavic464bl5mp5yv1dscbk0nmfn966"; depends=[wavethresh]; }; + waveband = derive2 { name="waveband"; version="4.7"; sha256="0b57g7jwvqgqjzd7x1pd4nqpx22rmiskvf8wjwrgplqzx4daxny2"; depends=[wavethresh]; }; waved = derive2 { name="waved"; version="1.1-2"; sha256="17pr9qhz0dbbcr78vwm964d9zd7yrfrqvadr1lwf756bsrscmlg3"; depends=[]; }; wavefunction = derive2 { name="wavefunction"; version="1.0.0"; sha256="1g0g9i0s93lcpcx7icqn15bvkmd79slkgimspvvwp2bxdsc5nnf2"; depends=[]; }; wavelets = derive2 { name="wavelets"; version="0.3-0"; sha256="141s7z7wxl5plxp7xp7wczswlcvb18a4h3n881l9qc4ny9p7gfpa"; depends=[]; }; @@ -12069,8 +12305,8 @@ in with self; { weathermetrics = derive2 { name="weathermetrics"; version="1.2.2"; sha256="1hjhgsy3v8328hv4czxxz7kp68sxc10sy10f3dv5j8f6pka6qlsp"; depends=[]; }; weatherr = derive2 { name="weatherr"; version="0.1.2"; sha256="11sb5bmqccqkvlabsw4siy9n6ivsrvxavywvaffgrs3blmnygql9"; depends=[ggmap lubridate RJSONIO XML]; }; webTRISr = derive2 { name="webTRISr"; version="0.1.0"; sha256="19xal5zg9mg25vzvkz55zm6gkd8b0y3sw3zbbrxn73a1jg8x5v0l"; depends=[dplyr httr jsonlite lubridate magrittr purrr readr stringr]; }; - webchem = derive2 { name="webchem"; version="0.3.0"; sha256="11ryyniqcf6pa5avc5qks0hpksmapk3564bjva86626vml0mixby"; depends=[httr jsonlite RCurl rvest stringr xml2]; }; - webdriver = derive2 { name="webdriver"; version="1.0.4"; sha256="0k031f26iihk2dxypqvfi60bhpj78yhwvhbmxqv7yrpa8s6j5flm"; depends=[base64enc callr curl debugme httr jsonlite R6 showimage]; }; + webchem = derive2 { name="webchem"; version="0.4.0"; sha256="032bsfnkn7s33y42fyf8yradsh8jhms4ryjkh0r76hqnx3j00ph0"; depends=[httr jsonlite RCurl rvest stringr xml2]; }; + webdriver = derive2 { name="webdriver"; version="1.0.5"; sha256="0l3nz7gf62jlkvkn5sfxfvn0prxz3ds7nlpfb1yhnmdljhbzrgzf"; depends=[base64enc callr curl debugme httr jsonlite R6 showimage withr]; }; webglobe = derive2 { name="webglobe"; version="1.0.2"; sha256="1277d6fkgrgixlhikfwf0r6z8g5b7mah905xi219qsfycxmifgn9"; depends=[geojsonio httpuv jsonlite]; }; webmockr = derive2 { name="webmockr"; version="0.2.0"; sha256="1zzfam380gy1d3k909ixbk61gmmv0w1x17qz8avrrnjlvqbp9gmn"; depends=[crul curl fauxpas jsonlite lazyeval magrittr R6 urltools]; }; webp = derive2 { name="webp"; version="0.4"; sha256="0jsyjynrsrqpbg93rn48xrjclkvwmz2c2lhcfli5djny122ymh6r"; depends=[]; }; @@ -12088,7 +12324,7 @@ in with self; { weights = derive2 { name="weights"; version="0.85"; sha256="0nsvgx2yn2ynrkqvvy3fxjsi6aw8w3zknm80fyjrih2zmxc7v61f"; depends=[gdata Hmisc mice]; }; weirs = derive2 { name="weirs"; version="0.25"; sha256="17a0ppi7ghikrwn39zvhg2cvhmnr3w0qi7r9lj22x65ii9nzadd7"; depends=[]; }; welchADF = derive2 { name="welchADF"; version="0.2"; sha256="1gyii50khjd1pamv3v19ajx6b2vw2aspbzmqiqrqmvcl46nha24y"; depends=[lme4]; }; - wellknown = derive2 { name="wellknown"; version="0.1.0"; sha256="0cin4xi1780hglmcfyjiynvh1lm90yryl1m6z1snpprfzsxx3mmg"; depends=[jsonlite magrittr]; }; + wellknown = derive2 { name="wellknown"; version="0.5.0"; sha256="1y3hi5ajqaxx3s40cx24ayfcd3c6d1ydlhsm0gg2fxgmidm6bhwy"; depends=[jsonlite V8]; }; wesanderson = derive2 { name="wesanderson"; version="0.3.2"; sha256="17acf9ydi2sw7q887ni9ly12mdmip66ix6gdkh68rncj8sx3csrd"; depends=[]; }; wfe = derive2 { name="wfe"; version="1.6"; sha256="0y8f042hzlqwgsr63rl2apl7hkw9bs69a287dynvz9w078am61ch"; depends=[arm MASS Matrix]; }; wfg = derive2 { name="wfg"; version="0.1"; sha256="1r6wb8v42mpapjfhmkmghm9fq21c3s4zmdxy8nlh31nsja71c37d"; depends=[igraph]; }; @@ -12096,6 +12332,7 @@ in with self; { wgaim = derive2 { name="wgaim"; version="1.4-11"; sha256="1jjyp100dcjjczp61xlvhmy48ynniqcys535vzbgswhr7fvijymg"; depends=[lattice qtl]; }; wgeesel = derive2 { name="wgeesel"; version="1.5"; sha256="0lybvsq5168cjybzv2dbyx2z8aakcx7i7ivm8zc90haiispm9n5x"; depends=[bindata CRTgeeDR geepack MASS PoisNor]; }; wgsea = derive2 { name="wgsea"; version="1.8"; sha256="1114wik011sm2n12bwm2bhqvdxagbhbscif45k4pgxdkahy2abpi"; depends=[snpStats]; }; + wheatmap = derive2 { name="wheatmap"; version="0.1.0"; sha256="1c1xvzy194vw3idkwkqp9kyrfldzczj30cl15jw1bbnw87zcwdzy"; depends=[colorspace RColorBrewer]; }; whereport = derive2 { name="whereport"; version="0.1"; sha256="1gdqzr2hrnpxbwl7cfps4m3xja8wkgwfs50i2nailybympvdnxm4"; depends=[dplyr]; }; whisker = derive2 { name="whisker"; version="0.3-2"; sha256="0z4cn115gxcl086d6bnqr8afi67b6a7xqg6ivmk3l4ng1x8kcj28"; depends=[]; }; whitening = derive2 { name="whitening"; version="1.0.0"; sha256="0vncjbrw9gafplz6r02x0j1fnrfvxq027h1pqcbdwqykjzg0zcym"; depends=[corpcor]; }; @@ -12113,26 +12350,28 @@ in with self; { wildcard = derive2 { name="wildcard"; version="1.1.0"; sha256="0qkzab84z95g5f4fv3v4wisccgd7k9m3210pz4nvm1x8rfaqfjf1"; depends=[magrittr stringi]; }; wildlifeDI = derive2 { name="wildlifeDI"; version="0.2"; sha256="0z8zyrl3d73x2j32l6xqz5nwhygzy7c9sjfp6bql5acyfvn7ngjv"; depends=[adehabitatLT rgeos sp]; }; wildpoker = derive2 { name="wildpoker"; version="1.1"; sha256="1302ain55spz34irmq49sp9b1pvrn2nxmzmqs8m9wdk6g82h3s27"; depends=[]; }; + winRatioAnalysis = derive2 { name="winRatioAnalysis"; version="0.1.0"; sha256="1msvc06bfzw9clinxbvr5fdw38dff0c0xii46182nwnk5kj0libr"; depends=[data_table JM Matrix MLEcens mvtnorm nlme plyr pssm survival]; }; windex = derive2 { name="windex"; version="1.0"; sha256="0ci10x6mm5i03j05fyadxa0ic0ngpyp5nsn05p9m7v1is5jhxci0"; depends=[ape geiger scatterplot3d]; }; - windfarmGA = derive2 { name="windfarmGA"; version="1.2"; sha256="1g1m7q8gdkd4mawdxi06lsalhii2ymzqlmxfdqhp2cnvj4k7fqby"; depends=[calibrate data_table doParallel dplyr foreach geoR ggplot2 googleVis gstat gtools leaflet magrittr maptools RandomFields raster RColorBrewer rgdal rgeos rgl RgoogleMaps sp spatstat]; }; + windfarmGA = derive2 { name="windfarmGA"; version="1.2.1"; sha256="1v4brwi92a2kchak43z0vxjq11373amh190fnmpmnpz58zbls448"; depends=[calibrate data_table doParallel dplyr foreach geoR ggplot2 googleVis gstat gtools leaflet magrittr maptools RandomFields raster RColorBrewer rgdal rgeos rgl RgoogleMaps sp spatstat]; }; wingui = derive2 { name="wingui"; version="0.2"; sha256="0yf6k33qpcjzyb7ckwsxpdw3pcsja2wsf08vaca7qw27yxrbmaa3"; depends=[Rcpp]; }; wiod = derive2 { name="wiod"; version="0.3.0"; sha256="1f151xmc6bm5d28w5123nm0hv7j1v8hay4jk5fk8pwn6yljl1pah"; depends=[decompr gvc]; }; wiqid = derive2 { name="wiqid"; version="0.1.3"; sha256="06six8w77lf9rc49hnr42xgn2jvhb84wvqgi08ns22yn4z2iz9pz"; depends=[coda HDInterval MASS truncnorm]; }; - withr = derive2 { name="withr"; version="2.1.1"; sha256="17pbllxv18gf1mli9mm5px4wzp364907a4wrl20r1y5q8qwawpxx"; depends=[]; }; + withr = derive2 { name="withr"; version="2.1.2"; sha256="11j6zykklxnvp4xqsr6a2xib665i38m3khdspp887nwagmvnydj1"; depends=[]; }; wkb = derive2 { name="wkb"; version="0.3-0"; sha256="0s7libkg27jdmcw5qmk5j0cmz3nqq7ny4q8gy4vhbgsgj4gbbdn9"; depends=[sp]; }; wktmo = derive2 { name="wktmo"; version="1.0.5"; sha256="05pjyk0xsdazbi1x7xfmg097ybybd60zmzzm7sch1ikp05hzn0wb"; depends=[]; }; wle = derive2 { name="wle"; version="0.9-91"; sha256="18gqwrrw618f1xx93n0lk95gpi3lxvfkr6fmlb82v2wiibb7k7ak"; depends=[circular]; }; wmlf = derive2 { name="wmlf"; version="0.1.2"; sha256="0zxw84l5v12r15hpyd1kbajjz3cbkn5g884kmj72y7yi0yi1b6d6"; depends=[waveslim]; }; wmtsa = derive2 { name="wmtsa"; version="2.0-3"; sha256="1q436krz5p1f4a7a7sya6a9rh9x9mi8zzcgq66gbk9w9w4hcqcj6"; depends=[ifultools MASS splus2R]; }; wmwpow = derive2 { name="wmwpow"; version="0.1.0"; sha256="0hvim7b9zn6h6w6m6hgil919nkzkn8676x8b2f3lbmm8m7dwm3lq"; depends=[lamW MASS smoothmest]; }; - wnl = derive2 { name="wnl"; version="0.3.3"; sha256="1dcq7xicsbwwlw8f2g1f2q4b4ph0w5kjs3108cfg12yww0qjl4ss"; depends=[numDeriv]; }; + wnl = derive2 { name="wnl"; version="0.4.0"; sha256="02axa2xfbsvqiil240ywkj3r4yw5sqzk9mai1nccrvcx9fz8qlgc"; depends=[numDeriv]; }; wnominate = derive2 { name="wnominate"; version="1.2.5"; sha256="0pvw36jzx90z7ah4f7cyf95csdn5x7n9rh3ddsppa61y1dmjsn5k"; depends=[pscl]; }; woe = derive2 { name="woe"; version="0.2"; sha256="15mvcmwnrqxpzn054lq85vyzq5rgxkiwbd40gnn4s3ny1xdrwgsm"; depends=[]; }; woeBinning = derive2 { name="woeBinning"; version="0.1.5"; sha256="04pw32vng31v1n4r1g1fisvv8cacxmcx7m65vw4a2byamp2d25yq"; depends=[]; }; woeR = derive2 { name="woeR"; version="0.1.3"; sha256="15bdhgjq39svzaqzmfykyaq4r543lq15jf0sz8m9bwjv2c6vlx5l"; depends=[dplyr]; }; womblR = derive2 { name="womblR"; version="1.0.2"; sha256="0cnggwi47pmyjqz78vcvdzv3kpss6v4h404w2d7dii0zfqjr7bpk"; depends=[msm mvtnorm Rcpp RcppArmadillo]; }; - wooldridge = derive2 { name="wooldridge"; version="1.2.0"; sha256="1ib7qqmzybk7a171ny0zszh1lw2zgqyz35rb7g6y4ign2ng9ml9k"; depends=[]; }; + wooldridge = derive2 { name="wooldridge"; version="1.3.0"; sha256="029vdiglwkr7ilr7jvzarvphcc71n1majn6bh427b4qq7n01a7wb"; depends=[]; }; word_alignment = derive2 { name="word.alignment"; version="1.0.9"; sha256="02dy4a9agfb99rjbqxy35nf11bpxyjcq15bnyzjkbvcy0ppfgz0l"; depends=[data_table openxlsx quanteda]; }; + wordbankr = derive2 { name="wordbankr"; version="0.3.0"; sha256="0aa1gz3fg7h9wnk93ialwj0wjyk8wxani8galwkrms4fp7d5lmf4"; depends=[assertthat DBI dbplyr dplyr purrr rlang RMySQL robustbase stringr tidyr]; }; wordcloud = derive2 { name="wordcloud"; version="2.5"; sha256="1ajqdkm8h1wid3d41zd8v7xzf2swid998w31zrghd45a5lcp7qcm"; depends=[RColorBrewer Rcpp slam]; }; wordcloud2 = derive2 { name="wordcloud2"; version="0.2.1"; sha256="1a2q42bn65q4idxq0vxysyam16q6c18inxv4dqhfy0x52j8z9x6k"; depends=[base64enc htmlwidgets]; }; wordmatch = derive2 { name="wordmatch"; version="1.0"; sha256="0zscp361qf79y1zsliga18hc7wj36cnydshrqb9pv67b65njrznz"; depends=[plyr reshape2]; }; @@ -12146,12 +12385,12 @@ in with self; { wpp2010 = derive2 { name="wpp2010"; version="1.2-0"; sha256="1h87r1cn4lnx80dprvawsyzfkriscqjgr27gvv7n19wvsx8qd57k"; depends=[]; }; wpp2012 = derive2 { name="wpp2012"; version="2.2-1"; sha256="00283s4r36zzwn67fydrl7ldg6jhn14qkf47h0ifmsky95bd1n5k"; depends=[]; }; wpp2015 = derive2 { name="wpp2015"; version="1.1-0"; sha256="01vsdma2fgh0vd96ly4f704hl200v0w8ksz60gjxhm44ih3qszh3"; depends=[]; }; - wpp2017 = derive2 { name="wpp2017"; version="1.1-2"; sha256="18hyygk928kp25n5iy5nwz2fdicgpk3ncpkp2pksnp0cxzw3585w"; depends=[]; }; + wpp2017 = derive2 { name="wpp2017"; version="1.2-0"; sha256="0dk56wqs7g54r6jjb6wnppdf9d94474nja21j0bi6by0l8gn6lyc"; depends=[plyr]; }; wppExplorer = derive2 { name="wppExplorer"; version="2.1-1"; sha256="0n0ayn8bxkrabw2iyqv3hfkdchbk9bzv1lhkjpxnjb6z3zl1sggl"; depends=[DT ggplot2 googleVis Hmisc plyr reshape2 shiny shinyjs shinythemes wpp2017]; }; wql = derive2 { name="wql"; version="0.4.9"; sha256="0m16l807mhcjkbqhlzhc24pw4hl78fjyykiszlg337x3qs803fg2"; depends=[ggplot2 reshape2 zoo]; }; wqs = derive2 { name="wqs"; version="0.0.1"; sha256="14qaa9g9v4nqrv897laflib3wwhflyfaf9wpllmbi5xfv9223rcg"; depends=[glm2 Rsolnp]; }; wrangle = derive2 { name="wrangle"; version="0.4"; sha256="0d1xdcvgcv8bn20s90sn1dmzhcdz39yr1m2bkcjbvavm132p96bl"; depends=[dplyr lazyeval magrittr tidyr]; }; - wrapr = derive2 { name="wrapr"; version="1.2.0"; sha256="1dagjsbi75gplzkc44p4jqjbh3plp0kw9dz060kqsf0y7z6dk9vh"; depends=[]; }; + wrapr = derive2 { name="wrapr"; version="1.4.0"; sha256="0kxnpvqnr9whc8f5dr0xwff23pky9hp7mvrprvqnkwk0k44zd6c5"; depends=[]; }; wrassp = derive2 { name="wrassp"; version="0.1.6"; sha256="1f6yyw6mmwc267cd9v17k6n4fhymi0y201bm6ii56rcw86n4ix77"; depends=[]; }; write_snns = derive2 { name="write.snns"; version="0.0-4.2"; sha256="0sxg7z8rnh4lssbivkrfxldv4ivy37wkndzzndpbvq2gbvbjnp4l"; depends=[]; }; writexl = derive2 { name="writexl"; version="0.2"; sha256="0hclrbn21sc0ifd2c5xfww84jf47412wzs86a73swxxjzcbrkg5k"; depends=[]; }; @@ -12171,7 +12410,9 @@ in with self; { x12 = derive2 { name="x12"; version="1.9.0"; sha256="0hrcw1d52yp5rr4r120lcnfxw2rgs95njg37m28blcnfbq2flfc2"; depends=[stringr x13binary]; }; x12GUI = derive2 { name="x12GUI"; version="0.13.0"; sha256="1mga7g9gwb3nv2qs27lz4n9rp6j3svads28hql88sxaif6is3nk1"; depends=[cairoDevice Hmisc lattice RGtk2 stringr x12]; }; x13binary = derive2 { name="x13binary"; version="1.1.39-1"; sha256="1v6slh5136av3l7bk99a57gj6i6khx2j55qv4pyz1zmrzzgaayyc"; depends=[]; }; + x3ptools = derive2 { name="x3ptools"; version="0.0.1"; sha256="16kms5hbpa5hz5i0pdwx49yp2hmhyr8hd4w672vmwi94s5d84i1q"; depends=[digest rgl xml2 zoo]; }; xLLiM = derive2 { name="xLLiM"; version="2.1"; sha256="1q6ryw9z5wi0amv5f4drz14p36zy8gc2a0s59q10jixhhyas7ycl"; depends=[abind capushe corpcor igraph MASS Matrix]; }; + xROI = derive2 { name="xROI"; version="0.1.2"; sha256="01xicw6ffrzs0df69dmylfxxfszqy5j81vba1w1l99h7hxq5a6bs"; depends=[colourpicker data_table jpeg lubridate moments plotly raster RCurl rgdal rjson shiny shinyAce shinyBS shinydashboard shinyFiles shinyjs shinythemes shinyTime sp stringr tiff]; }; xSub = derive2 { name="xSub"; version="0.0.1"; sha256="0ccvkdylsia8qkfjlbbyggpy4l8z3r05cmvp4xb3j4628fa82jav"; depends=[countrycode haven RCurl]; }; xVA = derive2 { name="xVA"; version="0.8.1"; sha256="0wr4i37sya5gg6v63ka16g9077gxbhvjqyqfaahhban8skzl2adf"; depends=[SACCR Trading]; }; xaringan = derive2 { name="xaringan"; version="0.6"; sha256="0jgdixgbkwp9jnvjnrzdmlawz8f24z8in56cma3hn79glbvxfaw4"; depends=[htmltools knitr rmarkdown servr xfun]; }; @@ -12205,8 +12446,8 @@ in with self; { xtable = derive2 { name="xtable"; version="1.8-2"; sha256="0398qkpvlw3dv0myz4mjcyqwpwc2m31l127r8vdzwc71wb6s28qn"; depends=[]; }; xtal = derive2 { name="xtal"; version="1.15"; sha256="1zq3vd5x3vw6acn47yd2x7kflr9sm3znmdkm68cs64ha54jbl3vs"; depends=[]; }; xtermStyle = derive2 { name="xtermStyle"; version="3.0.5"; sha256="1q4qq8w4sgxbbb1x0i4k5xndvwisvjszg830wspwb37wigxz8xvz"; depends=[]; }; - xtractomatic = derive2 { name="xtractomatic"; version="3.4.1"; sha256="189lya8ijm8vxjki76gjdhv1nyp3860ydpzg5ij12ggd5qqn1zgy"; depends=[dplyr httr ncdf4 readr sp]; }; - xts = derive2 { name="xts"; version="0.10-1"; sha256="1j9ddh9v9081zrqlpylsk13fldilhjdyaw6r6pa726fhgnrsf8a2"; depends=[zoo]; }; + xtractomatic = derive2 { name="xtractomatic"; version="3.4.2"; sha256="1w70kk608avnf7zdjx79gxqmj12cw86ma4x0b9j92md1vmpw5389"; depends=[dplyr httr ncdf4 readr sp]; }; + xts = derive2 { name="xts"; version="0.10-2"; sha256="1i11fczks4lh8rpi6xbm9bm7f3jpcp6xw03kv178g3n3361qhmc1"; depends=[zoo]; }; xwf = derive2 { name="xwf"; version="0.2-1"; sha256="1g94wbsq8flnkxxfxx6yg87siiwpyrx219an9a2cf1blnwjv9b68"; depends=[mgcv]; }; xxIRT = derive2 { name="xxIRT"; version="2.0.3"; sha256="10n9rrhp0v71gmn0s2l2qi6sfplwj7anydw6rxqk409wg5is3x93"; depends=[dplyr ggplot2 lpSolveAPI magrittr reshape2]; }; xyloplot = derive2 { name="xyloplot"; version="1.5"; sha256="0h90070m3xgcfky5q6vx6l2lfz0ihwbp2xg25mgmbijz4kg3n9d3"; depends=[]; }; @@ -12221,12 +12462,12 @@ in with self; { yasp = derive2 { name="yasp"; version="0.1.0"; sha256="082w1l0892v0vrvfmc1ssgy9ccj30hcrg7m56x61spgcmckfshy4"; depends=[]; }; ycinterextra = derive2 { name="ycinterextra"; version="0.1"; sha256="0hr37izbbmxqkjy6a7q8vcn0vs8an1ck9y8xfjpl5z0rygi8xc1v"; depends=[mcGlobaloptim]; }; yearn = derive2 { name="yearn"; version="0.1.3"; sha256="03aqbf3q0nhg73pqpwlqdhpbmfa0rvv78b84b4mqir43601vjx65"; depends=[BiocInstaller devtools githubinstall]; }; - yesno = derive2 { name="yesno"; version="0.0.2"; sha256="0aa8kqcqlix9a9a2l4fnl2qv25dgdn4m7cfsh7m0kk76y8q5gbc9"; depends=[]; }; + yesno = derive2 { name="yesno"; version="0.1.0"; sha256="0l3v51kghbq9s00s736s4jvl8a0yhbgb908mjvhw6k5nqb2cgh8a"; depends=[]; }; yhat = derive2 { name="yhat"; version="2.0-0"; sha256="0vdhkknmms7zy7iha894jn1hr1h5w67pr53r0q67m7p404w21iza"; depends=[boot miscTools plotrix yacca]; }; yhatr = derive2 { name="yhatr"; version="0.15.1"; sha256="18g2cr1kjxnfw6cwzl62ynppfv1zz732kbx18zq8918l85kx6wbw"; depends=[httr jsonlite stringr]; }; ykmeans = derive2 { name="ykmeans"; version="1.0"; sha256="0xfji2fmslvc059kk3rwkv575ffzl787sa9d4vw5hxnsmkn8lq50"; depends=[foreach plyr]; }; yorkr = derive2 { name="yorkr"; version="0.0.7"; sha256="035pmvignq4lip3y5670kxj1n70ff04yy2jwi4837pimr9d0qjhv"; depends=[dplyr ggplot2 gridExtra reshape2 rpart_plot yaml]; }; - yuima = derive2 { name="yuima"; version="1.6.8"; sha256="1x10q2l8xd3h86m333mi6hkb7fpf4q5fbs7gwmlynylkz216b65j"; depends=[cubature expm mvtnorm Rcpp RcppArmadillo zoo]; }; + yuima = derive2 { name="yuima"; version="1.7.10"; sha256="0g1jh81s2i6ilpcbrjbz9wmk65m6xsdv8dif88x6v5k8660k2ksl"; depends=[boot cubature expm mvtnorm Rcpp RcppArmadillo zoo]; }; yuimaGUI = derive2 { name="yuimaGUI"; version="1.2.0"; sha256="166hsq1nc0jzkqbz08y3dl0qdi58swascbkm1lc7zhsh6g93azjs"; depends=[DT ggplot2 plotly quantmod sde shiny shinyBS shinydashboard shinyjs yuima]; }; yummlyr = derive2 { name="yummlyr"; version="0.1.1"; sha256="0xrk6g58laksz92d8mxck923sk4j92g55szrkxk123wjp5kg9vx6"; depends=[httr jsonlite]; }; zCompositions = derive2 { name="zCompositions"; version="1.1.1"; sha256="1j6v7mfxhn67mr3q6cvcjj9pqc8a02w114z8q74h3l6jw8ahjg6m"; depends=[MASS NADA truncnorm]; }; @@ -12237,15 +12478,16 @@ in with self; { zeligverse = derive2 { name="zeligverse"; version="0.1.1"; sha256="1hf3hbgzdlhhyy2gvg984dwp8d0qm0ziyn8i9h5x00gwf74vn9dr"; depends=[Amelia dplyr MatchIt purrr rstudioapi tibble WhatIf Zelig ZeligChoice ZeligEI]; }; zendeskR = derive2 { name="zendeskR"; version="0.4"; sha256="06cjwk08w3x6dx717123psinid5bx6c563jnfn890373jw6xnfrk"; depends=[RCurl rjson]; }; zenplots = derive2 { name="zenplots"; version="0.0-3"; sha256="1ba9xv522knzbirl6ac5hzbmsw8ignsmymbkps2w057w0fsc9iyz"; depends=[graph MASS PairViz]; }; - zetadiv = derive2 { name="zetadiv"; version="1.0.1"; sha256="0a50xj7bgb2w3yx2ghpwq2y2hkilxx0dchhscspzjalyw77jhxvp"; depends=[car glm2 Imap mgcv nnls scam vegan]; }; + zetadiv = derive2 { name="zetadiv"; version="1.1.0"; sha256="0z90gpwyi2d0xnwy2vz7an5wv7jrwhl99kd2s76dlxylfjp7j2rn"; depends=[car glm2 Imap mgcv nnls scam vegan]; }; zfa = derive2 { name="zfa"; version="1.0"; sha256="0lddwpifkzggzvy56ans5pfknfr8laxcg264f3ph2z150gw1plsh"; depends=[SKAT]; }; zic = derive2 { name="zic"; version="0.9.1"; sha256="1vd64ljigf6iwgzlgdxgj65nlwir176h7ddznddpaz2abh6n6zwp"; depends=[coda Rcpp RcppArmadillo]; }; zip = derive2 { name="zip"; version="1.0.0"; sha256="0rgr9pcdhdq3k8n29h2ircp3ri1ibhrx81gja1y7331v15xyrabg"; depends=[]; }; zipcode = derive2 { name="zipcode"; version="1.0"; sha256="1lvlf1h5fv412idpdssjfh4fki933dm5nhr41ppl1mf45b9j7azn"; depends=[]; }; zipfR = derive2 { name="zipfR"; version="0.6-10"; sha256="16h5saj0b2qm3qwd7arzamn0n05hn31ybgzq4pb10ri0ajs1cvic"; depends=[]; }; - ziphsmm = derive2 { name="ziphsmm"; version="2.0.2"; sha256="0ki9slsrh9skb23svc9m5a0gbzf4crhgrricr0swr97n5h9xfzkw"; depends=[Rcpp RcppArmadillo]; }; + zipfextR = derive2 { name="zipfextR"; version="1.0.0"; sha256="007pw5z9rz8ng0llyd2088qxldc3sf0s35pcfqmm85qb94fdksdd"; depends=[tolerance VGAM]; }; + ziphsmm = derive2 { name="ziphsmm"; version="2.0.4"; sha256="19ypfx05z7c0skv1nvjivxarblizqqwaqpqyvnhqrckfb7lkhdby"; depends=[pracma Rcpp RcppArmadillo]; }; zoeppritz = derive2 { name="zoeppritz"; version="1.0-7"; sha256="14j9jl2g7gn94nzs96mwsgwlxnfbr1crjfmfwbi3rk367xi197jb"; depends=[]; }; - zoib = derive2 { name="zoib"; version="1.5.0"; sha256="133d5qxhv5vlxb9f1lh0zsmcb7ycbr42hjynzmd8f5fd91x8k43i"; depends=[abind coda Formula matrixcalc rjags]; }; + zoib = derive2 { name="zoib"; version="1.5.1"; sha256="0lsyr8hfhk4dk129x2l1793v6nmf2k97wnsc44ir6ymip3i4zfld"; depends=[abind coda Formula matrixcalc rjags]; }; zonator = derive2 { name="zonator"; version="0.5.9"; sha256="04gjrm9nxnxsigrc30zghmv37ijsx27134hfnrbm51smw2y60dm4"; depends=[ggplot2 raster RColorBrewer reshape2 rgdal]; }; zoo = derive2 { name="zoo"; version="1.8-1"; sha256="16nc5jnpkf5j9vgq3pzssv7knj30mi055wj7q3sygz3l0d88hgfr"; depends=[lattice]; }; zooaRch = derive2 { name="zooaRch"; version="1.2"; sha256="0grc378xppv0303sf4flfqz5002vq5a23nzbq4bsff41rww7dihc"; depends=[ggplot2]; }; diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index 37d6611cd9f0..6c00e58d9e73 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -438,7 +438,6 @@ let packagesRequireingX = [ "accrual" "ade4TkGUI" - "adehabitat" "analogue" "analogueExtra" "AnalyzeFMRI" @@ -585,7 +584,6 @@ let "ProbForecastGOP" "qtbase" "qtpaint" - "R2STATS" "r4ss" "RandomFields" "rareNMtests" diff --git a/pkgs/development/ruby-modules/bundled-common/default.nix b/pkgs/development/ruby-modules/bundled-common/default.nix index 1f31aec886a6..16f1abe1a899 100644 --- a/pkgs/development/ruby-modules/bundled-common/default.nix +++ b/pkgs/development/ruby-modules/bundled-common/default.nix @@ -29,7 +29,7 @@ with import ./functions.nix { inherit lib gemConfig; }; let gemFiles = bundlerFiles args; - importedGemset = if builtins.typeOf gemFiles.gemset == "path" + importedGemset = if builtins.typeOf gemFiles.gemset != "set" then import gemFiles.gemset else gemFiles.gemset; diff --git a/pkgs/development/ruby-modules/gem-config/default.nix b/pkgs/development/ruby-modules/gem-config/default.nix index 7a31cf0cbbc8..a447cd1a1032 100644 --- a/pkgs/development/ruby-modules/gem-config/default.nix +++ b/pkgs/development/ruby-modules/gem-config/default.nix @@ -96,6 +96,10 @@ in ''; }; + do_sqlite3 = attrs: { + buildInputs = [ sqlite ]; + }; + eventmachine = attrs: { buildInputs = [ openssl ]; }; diff --git a/pkgs/development/tools/analysis/flow/default.nix b/pkgs/development/tools/analysis/flow/default.nix index 2104e532f284..042b338b2b14 100644 --- a/pkgs/development/tools/analysis/flow/default.nix +++ b/pkgs/development/tools/analysis/flow/default.nix @@ -4,14 +4,14 @@ with lib; stdenv.mkDerivation rec { - version = "0.69.0"; + version = "0.70.0"; name = "flow-${version}"; src = fetchFromGitHub { owner = "facebook"; repo = "flow"; rev = "v${version}"; - sha256 = "11n8g471zgazcnzsxcw45gzzn63xanw91wj5xwsx8i2cp7wg9g7g"; + sha256 = "1pydmfs7xxrqjdnidp2nagwpk2d0vf5nx3m821plld3vbyh22b76"; }; installPhase = '' diff --git a/pkgs/development/tools/analysis/qcachegrind/default.nix b/pkgs/development/tools/analysis/qcachegrind/default.nix index 15be7554c198..30d82aca83ae 100644 --- a/pkgs/development/tools/analysis/qcachegrind/default.nix +++ b/pkgs/development/tools/analysis/qcachegrind/default.nix @@ -12,14 +12,6 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ qmake ]; - patches = [ - (fetchpatch { - name = "fix-qt5_10-build.patch"; - url = https://github.com/KDE/kcachegrind/commit/c41607a.patch; - sha256 = "00kh5im3hpcarch8rc2dsgxsajfmd8vd7rry9x6mxrbkgr4ifq8y"; - }) - ]; - postInstall = '' mkdir -p $out/bin cp -p converters/dprof2calltree $out/bin/dprof2calltree diff --git a/pkgs/development/tools/analysis/radare2-cutter/default.nix b/pkgs/development/tools/analysis/radare2-cutter/default.nix index 3cd1d309e15d..d1ff712be2d3 100644 --- a/pkgs/development/tools/analysis/radare2-cutter/default.nix +++ b/pkgs/development/tools/analysis/radare2-cutter/default.nix @@ -3,35 +3,17 @@ stdenv.mkDerivation rec { name = "radare2-cutter-${version}"; - version = "1.1"; + version = "1.3"; src = fetchFromGitHub { owner = "radareorg"; repo = "cutter"; rev = "v${version}"; - sha256 = "02m5sf45n455hn34y7hrqanj830rc5xhz2ppp1z3mzbz0s515pfl"; + sha256 = "1z76yz2i9k8mxjk85k2agdj941szdbl2gi66p3dh50878zqavfrr"; }; postUnpack = "export sourceRoot=$sourceRoot/src"; - patches = [ - # Fixup version number :D - (fetchpatch { - url = "https://github.com/radareorg/cutter/commit/69506b64600df632afdca8b680baa7d946c78644.patch"; - sha256 = "0ks3ixz8bycjcfi26bd0p6z7qaplhq00alw44hsfzpdm4bmr01x0"; - }) - (fetchpatch { - url = "https://github.com/radareorg/cutter/commit/8b52c66f4f0091cd9d97389b32aa519c2c602e2b.patch"; - sha256 = "0wcdn35lx2943pfzm7mkg4sr82pm0qz3yxf74m8fxbd70s3w0gkm"; - }) - - # case-insensitive filtering - (fetchpatch { - url = "https://github.com/radareorg/cutter/commit/0ebd34370bcaed00000168147572bb78106eeab1.patch"; - sha256 = "0sc50jwhncfnd2i5mlyld4dbdzi2ws7nh4yglkhlap9l9h1jxn20"; - }) - ]; - patchFlags = [ "-p2" ]; nativeBuildInputs = [ qmake pkgconfig ]; diff --git a/pkgs/development/tools/analysis/radare2/default.nix b/pkgs/development/tools/analysis/radare2/default.nix index d1bf0af631c6..5f7b389cc2b1 100644 --- a/pkgs/development/tools/analysis/radare2/default.nix +++ b/pkgs/development/tools/analysis/radare2/default.nix @@ -1,9 +1,10 @@ -{stdenv, fetchFromGitHub, fetchgit, fetchurl, fetchpatch, pkgconfig, libusb, readline, libewf, perl, zlib, openssl, git, -gtk2 ? null, vte ? null, gtkdialog ? null, -python ? null, -ruby ? null, -lua ? null, -useX11, rubyBindings, pythonBindings, luaBindings}: +{stdenv, fetchFromGitHub, pkgconfig, libusb, readline, libewf, perl, zlib, openssl +, gtk2 ? null, vte ? null, gtkdialog ? null +, python ? null +, ruby ? null +, lua ? null +, useX11, rubyBindings, pythonBindings, luaBindings +}: assert useX11 -> (gtk2 != null && vte != null && gtkdialog != null); assert rubyBindings -> ruby != null; @@ -23,13 +24,16 @@ stdenv.mkDerivation rec { sha256 = "07x94chkhpn3wgw4pypn35psxq370j6xwmhf1mh5z27cqkq7c2yd"; }; + # do not try to update capstone + WITHOUT_PULL=1; + postPatch = let cs_tip = "4a1b580d069c82d60070d0869a87000db7cdabe2"; # version from $sourceRoot/shlr/Makefile - capstone = fetchgit { - url = "https://github.com/aquynh/capstone.git"; + capstone = fetchFromGitHub { + owner = "aquynh"; + repo = "capstone"; rev = cs_tip; - sha256 = "1b126npshdbwh5y7rafmb9w4dzlvxsf4ca6bx4zs2y7kbk48jyn8"; - leaveDotGit = true; + sha256 = "0v6rxfpxjq0hf40qn1n5m5wsv1dv6p1j8vm94a708lhvcbk9nkv8"; }; in '' if ! grep -F "CS_TIP=${cs_tip}" shlr/Makefile; then echo "CS_TIP mismatch"; exit 1; fi @@ -39,7 +43,7 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; - nativeBuildInputs = [ pkgconfig git ]; + nativeBuildInputs = [ pkgconfig ]; buildInputs = [ readline libusb libewf perl zlib openssl] ++ optional useX11 [gtkdialog vte gtk2] ++ optional rubyBindings [ruby] diff --git a/pkgs/development/tools/analysis/retdec/default.nix b/pkgs/development/tools/analysis/retdec/default.nix index f88546163d44..a4c62e6fc32c 100644 --- a/pkgs/development/tools/analysis/retdec/default.nix +++ b/pkgs/development/tools/analysis/retdec/default.nix @@ -116,5 +116,6 @@ in stdenv.mkDerivation rec { homepage = https://retdec.com; license = licenses.mit; maintainers = with maintainers; [ dtzWill ]; + broken = withPEPatterns; # retdec-full is broken, 2018-04-11 }; } diff --git a/pkgs/development/tools/apktool/default.nix b/pkgs/development/tools/apktool/default.nix index d1320960f39a..65211ca088b4 100644 --- a/pkgs/development/tools/apktool/default.nix +++ b/pkgs/development/tools/apktool/default.nix @@ -2,14 +2,14 @@ stdenv.mkDerivation rec { name = "apktool-${version}"; - version = "2.3.1"; + version = "2.3.2"; src = fetchurl { urls = [ "https://bitbucket.org/iBotPeaches/apktool/downloads/apktool_${version}.jar" "https://github.com/iBotPeaches/Apktool/releases/download/v${version}/apktool_${version}.jar" ]; - sha256 = "01xj2hivwwp3msvv0psxyxrzg95vj2ny56l3n90glhwznn7l60ai"; + sha256 = "01sjrc3fwkpkr8b4w1i9amyiix02b29n0w2zcrw5sdj91n8vm3b4"; }; phases = [ "installPhase" ]; diff --git a/pkgs/development/tools/build-managers/buildbot/default.nix b/pkgs/development/tools/build-managers/buildbot/default.nix index 3e994227ef05..98adaf1c1aa1 100644 --- a/pkgs/development/tools/build-managers/buildbot/default.nix +++ b/pkgs/development/tools/build-managers/buildbot/default.nix @@ -14,11 +14,11 @@ let package = pythonPackages.buildPythonApplication rec { name = "${pname}-${version}"; pname = "buildbot"; - version = "1.0.0"; + version = "1.1.0"; src = pythonPackages.fetchPypi { inherit pname version; - sha256 = "0y7gpymxl09gd9dyqj7zqhaihpl9da1v8ppxi4r161ywd8jv9b1g"; + sha256 = "1rhmlcvw0dsr4f37sb3xmb9xcn76lsrsw2g1z611g339nmxzi0sc"; }; buildInputs = with pythonPackages; [ diff --git a/pkgs/development/tools/build-managers/buildbot/plugins.nix b/pkgs/development/tools/build-managers/buildbot/plugins.nix index 1d1b963df993..35c8ed8c71cd 100644 --- a/pkgs/development/tools/build-managers/buildbot/plugins.nix +++ b/pkgs/development/tools/build-managers/buildbot/plugins.nix @@ -97,7 +97,7 @@ meta = with stdenv.lib; { homepage = http://buildbot.net/; description = "Buildbot WSGI dashboards Plugin"; - maintainers = with maintainers; [ akazakov ]; + maintainers = with maintainers; [ ]; license = licenses.gpl2; }; }; diff --git a/pkgs/development/tools/build-managers/buildbot/worker.nix b/pkgs/development/tools/build-managers/buildbot/worker.nix index 75e6bb0404be..59d3c93bb877 100644 --- a/pkgs/development/tools/build-managers/buildbot/worker.nix +++ b/pkgs/development/tools/build-managers/buildbot/worker.nix @@ -3,11 +3,11 @@ pythonPackages.buildPythonApplication (rec { name = "${pname}-${version}"; pname = "buildbot-worker"; - version = "1.0.0"; + version = "1.1.0"; src = pythonPackages.fetchPypi { inherit pname version; - sha256 = "0ws31ypmksah1c83h4npwg560p8v7n9j6l94p79y5pispjsgzqzl"; + sha256 = "0hpiawf0dq8phsvihlcx9bpl70n7s3rhcgbgma36bark6sgr4y8y"; }; buildInputs = with pythonPackages; [ setuptoolsTrial mock ]; diff --git a/pkgs/development/tools/build-managers/gn/default.nix b/pkgs/development/tools/build-managers/gn/default.nix index 5e7dd5214a04..35f54369abd9 100644 --- a/pkgs/development/tools/build-managers/gn/default.nix +++ b/pkgs/development/tools/build-managers/gn/default.nix @@ -1,77 +1,135 @@ -{ stdenv, lib, fetchgit, fetchurl, libevent, ninja, python }: +{ stdenv, lib, fetchgit, fetchzip, fetchpatch +, libevent, ninja, python, darwin }: let depsGit = { "tools/gn" = fetchgit { url = "https://chromium.googlesource.com/chromium/src/tools/gn"; - rev = "d0c518db129975ce88ff1de26c857873b0619c4b"; - sha256 = "0l15vzmjyx6bwlz1qhn3fy7yx3qzzxr3drnkj3l0p0fmyxza52vx"; + rev = "0fa417a0d2d8484e9a5a636e3301da322f586601"; + sha256 = "0pigcl14yc4aak6q1ghfjxdz2ah4fg4m2r5y3asw2rz6mpr5y9z0"; }; "base" = fetchgit { url = "https://chromium.googlesource.com/chromium/src/base"; - rev = "bc6e3ce8ca01b894751e1f7b22b561e3ae2e7f17"; - sha256 = "1yl49v6nxbrfms52xf7fiwh7d4301m2aj744pa3hzzh989c5j6g5"; + rev = "ab1d7c3b92ce9c9bc756bdefb8338360d1a33a1e"; + sha256 = "15wis6qg9ka62k6v1vamg0bp3v5vkpapg485jsn4bbfcaqp6di0f"; }; "build" = fetchgit { url = "https://chromium.googlesource.com/chromium/src/build"; - rev = "e934a19ae908081fba13769924e4ea45a7a451ce"; - sha256 = "0jhy418vaiin7djg9zvk83f8zhasigki4442x5j7gkmgmgmyc4am"; + rev = "8d44c08a4c9997695db8098198bdd5026bc7a6f9"; + sha256 = "19sajgf55xfmvnwvy2ss7g6pyljp751cfsws30w415m6m00lmpxl"; }; "config" = fetchgit { url = "https://chromium.googlesource.com/chromium/src/build/config"; - rev = "df16c6a2c070704b0a25efe46ee9af16de1e65b3"; - sha256 = "1x18syzz1scwhd8lf448hy5lnfpq118l403x9qmwm0np318w09wg"; + rev = "14116c0cdcb9e28995ca8bb384a12e5c9dbd1dbb"; + sha256 = "04nif0lm4wcy05b7xhal023874s4r0iq067q57cgwdm72i2gml40"; }; "testing/gtest" = fetchgit { url = "https://chromium.googlesource.com/chromium/testing/gtest"; rev = "585ec31ea716f08233a815e680fc0d4699843938"; sha256 = "0csn1cza66851nmxxiw42smsm3422mx67vcyykwn0a71lcjng6rc"; }; + "third_party/apple_apsl" = fetchzip { + url = "https://chromium.googlesource.com/chromium/src/third_party/+archive/8e6ccb8c74db6dfa15dd21401ace3ac96c054cf7/apple_apsl.tar.gz"; + sha256 = "1vgcg741lwz84kdy0qc5wn9dxx3j9zh6a9d185fpygdsipwikqv8"; + stripRoot = false; + }; + "buildtools/third_party/libc++/trunk" = fetchgit { + url = "https://chromium.googlesource.com/chromium/llvm-project/libcxx"; + rev = "ece1de8658d749e19c12cacd4458cc330eca94e3"; + sha256 = "1nlyvfkzhchwv9b18bh82jcamqv3acj26ah9ajs31f2dql05amhg"; + }; + "buildtools/third_party/libc++abi/trunk" = fetchgit { + url = "https://chromium.googlesource.com/chromium/llvm-project/libcxxabi"; + rev = "52c7a3760aef1df328a9bc957f686410872f0dc0"; + sha256 = "1aam539j01381q27b7xhij18pz3h0lhw08hglvqq4hgvlqx5cn2s"; + }; }; -in - stdenv.mkDerivation rec { - name = "gn"; - version = "0.0.0.20170629"; - sourceRoot = "."; +in stdenv.mkDerivation { + name = "gn"; + version = "20180423"; + sourceRoot = "."; - unpackPhase = '' - ${lib.concatStringsSep "\n" ( - lib.mapAttrsToList (n: v: '' - mkdir -p $sourceRoot/${n} + unpackPhase = '' + ${lib.concatStringsSep "\n" ( + lib.mapAttrsToList (n: v: '' + mkdir -p $sourceRoot/${n} + if [ -d ${v} ]; then cp -r ${v}/* $sourceRoot/${n} - '') depsGit)} - ''; - - postPatch = '' - # Patch shebands (for sandbox build) - chmod u+w -R build - patchShebangs build - - # Patch out Chromium-bundled libevent - chmod u+w tools/gn/bootstrap tools/gn/bootstrap/bootstrap.py - sed -i -e '/static_libraries.*libevent/,/^ *\]\?[})]$/d' \ - tools/gn/bootstrap/bootstrap.py - ''; - - NIX_LDFLAGS = "-levent"; - - nativeBuildInputs = [ ninja python ]; - buildInputs = [ libevent ]; - - buildPhase = '' - python tools/gn/bootstrap/bootstrap.py -s - ''; - - installPhase = '' - install -vD out/Release/gn "$out/bin/gn" - ''; - - meta = with stdenv.lib; { - description = "A meta-build system that generates NinjaBuild files"; - homepage = https://chromium.googlesource.com/chromium/src/tools/gn; - license = licenses.bsd3; - platforms = platforms.linux; - maintainers = [ maintainers.stesie ]; - }; - } + else + mkdir -p $sourceRoot/${n} + pushd $sourceRoot/${n} + unpackFile ${v} + popd + fi + '') depsGit)} + + chmod u+w -R $sourceRoot + ''; + + patches = [ + (fetchpatch { + url = "https://raw.githubusercontent.com/Eloston/ungoogled-chromium/master/resources/patches/ungoogled-chromium/macos/fix-gn-bootstrap.patch"; + sha256 = "1h8jgxznm7zrxlzb4wcfx4zx4lyvfrmpd0r7cd7h0s23wn8ibb3a"; + }) + ]; + + postPatch = '' + # Disable libevent bootstrapping (we will provide it). + sed -i -e '/static_libraries.*libevent/,/^ *\]\?[})]$/d' \ + tools/gn/bootstrap/bootstrap.py + + # FIXME Needed with old Apple SDKs + substituteInPlace base/mac/foundation_util.mm \ + --replace "NSArray<NSString*>*" "NSArray*" + substituteInPlace base/mac/sdk_forward_declarations.h \ + --replace "NSDictionary<VNImageOption, id>*" "NSDictionary*" \ + --replace "NSArray<VNRequest*>*" "NSArray*" \ + --replace "typedef NSString* VNImageOption NS_STRING_ENUM" "typedef NSString* VNImageOption" + + # Patch shebangs (for sandbox build) + patchShebangs build + ''; + + # FIXME again this shouldn't be necessary but I can't figure out a better way + NIX_CFLAGS_COMPILE = "-DMAC_OS_X_VERSION_MAX_ALLOWED=MAC_OS_X_VERSION_10_10 -DMAC_OS_X_VERSION_MIN_REQUIRED=MAC_OS_X_VERSION_10_10"; + + NIX_LDFLAGS = "-levent"; + + nativeBuildInputs = [ ninja python ]; + buildInputs = [ libevent ] + + # FIXME These dependencies shouldn't be needed but can't find a way + # around it. Chromium pulls this in while bootstrapping GN. + ++ lib.optionals stdenv.isDarwin (with darwin; with apple_sdk.frameworks; [ + libobjc + cctools + + # frameworks + ApplicationServices + Foundation + AppKit + ImageCaptureCore + CoreBluetooth + IOBluetooth + CoreWLAN + Quartz + Cocoa + ]); + + buildPhase = '' + python tools/gn/bootstrap/bootstrap.py -s + ''; + + installPhase = '' + install -vD out/Release/gn "$out/bin/gn" + ''; + + meta = with lib; { + description = "A meta-build system that generates NinjaBuild files"; + homepage = https://chromium.googlesource.com/chromium/src/tools/gn; + license = licenses.bsd3; + platforms = platforms.unix; + maintainers = with maintainers; [ stesie matthewbauer ]; + }; +} diff --git a/pkgs/development/tools/build-managers/gradle/default.nix b/pkgs/development/tools/build-managers/gradle/default.nix index 5e8f14c5f843..fbbddbd0fcbc 100644 --- a/pkgs/development/tools/build-managers/gradle/default.nix +++ b/pkgs/development/tools/build-managers/gradle/default.nix @@ -52,12 +52,12 @@ rec { }; gradle_latest = gradleGen rec { - name = "gradle-4.6"; + name = "gradle-4.7"; nativeVersion = "0.14"; src = fetchurl { url = "http://services.gradle.org/distributions/${name}-bin.zip"; - sha256 = "05drn7a9d2blbmd3l0443bpf5qzf5frwnl9ww0bha1qfng95zgcq"; + sha256 = "016vvjvk3gfasv3h6dxxp48kp9v4ariqj280bijn835mr1yhi9gw"; }; }; diff --git a/pkgs/development/tools/build-managers/gup/build.nix b/pkgs/development/tools/build-managers/gup/build.nix deleted file mode 100644 index a9af037bb81e..000000000000 --- a/pkgs/development/tools/build-managers/gup/build.nix +++ /dev/null @@ -1,16 +0,0 @@ -# NOTE: this file is copied from the upstream repository for this package. -# Please submit any changes you make here to https://github.com/timbertson/gup/ - -{ stdenv, lib, python, which, pychecker ? null }: -{ src, version, meta ? {} }: -stdenv.mkDerivation { - inherit src meta; - name = "gup-${version}"; - buildInputs = lib.remove null [ python which pychecker ]; - SKIP_PYCHECKER = pychecker == null; - buildPhase = "make python"; - installPhase = '' - mkdir $out - cp -r python/bin $out/bin - ''; -} diff --git a/pkgs/development/tools/build-managers/gup/default.nix b/pkgs/development/tools/build-managers/gup/default.nix index 8d1ad4490e98..f6d5b7b9b59c 100644 --- a/pkgs/development/tools/build-managers/gup/default.nix +++ b/pkgs/development/tools/build-managers/gup/default.nix @@ -1,21 +1,38 @@ -{ stdenv, fetchFromGitHub, lib, python, which }: -let +{ stdenv, fetchFromGitHub, nix-update-source, lib, python, which, pychecker ? null }: +stdenv.mkDerivation rec { version = "0.7.0"; src = fetchFromGitHub { - sha256 = "1pwnmlq2pgkkln9sgz4wlb9dqlqw83bkf105qljnlvggc21zm3pv"; - rev = "version-${version}"; - repo = "gup"; owner = "timbertson"; + repo = "gup"; + rev = "version-0.7.0"; + sha256 = "1pwnmlq2pgkkln9sgz4wlb9dqlqw83bkf105qljnlvggc21zm3pv"; + }; + name = "gup-${version}"; + buildInputs = lib.remove null [ python which pychecker ]; + SKIP_PYCHECKER = pychecker == null; + buildPhase = "make python"; + installPhase = '' + mkdir $out + cp -r python/bin $out/bin + ''; + passthru.updateScript = '' + set -e + echo + cd ${toString ./.} + ${nix-update-source}/bin/nix-update-source \ + --prompt version \ + --replace-attr version \ + --set owner timbertson \ + --set repo gup \ + --set type fetchFromGitHub \ + --set rev 'version-{version}' \ + --modify-nix default.nix + ''; + meta = { + inherit (src.meta) homepage; + description = "A better make, inspired by djb's redo"; + license = stdenv.lib.licenses.lgpl2Plus; + maintainers = [ stdenv.lib.maintainers.timbertson ]; + platforms = stdenv.lib.platforms.all; }; -in -import ./build.nix - { inherit stdenv lib python which; } - { inherit src version; - meta = { - inherit (src.meta) homepage; - description = "A better make, inspired by djb's redo"; - license = stdenv.lib.licenses.lgpl2Plus; - maintainers = [ stdenv.lib.maintainers.timbertson ]; - platforms = stdenv.lib.platforms.all; - }; - } +} diff --git a/pkgs/development/tools/cloudfoundry-cli/default.nix b/pkgs/development/tools/cloudfoundry-cli/default.nix index fc085b3e5ea5..22c2f0774182 100644 --- a/pkgs/development/tools/cloudfoundry-cli/default.nix +++ b/pkgs/development/tools/cloudfoundry-cli/default.nix @@ -2,17 +2,17 @@ buildGoPackage rec { name = "cloudfoundry-cli-${version}"; - version = "6.32.0"; + version = "6.36.1"; goPackagePath = "code.cloudfoundry.org/cli"; subPackages = [ "." ]; src = fetchFromGitHub { + owner = "cloudfoundry"; + repo = "cli"; rev = "v${version}"; - owner = "cloudfoundry-attic"; - repo = "cli-with-i18n"; - sha256 = "16r8zvahn4b98krmyb8zq9370i6572dhz88bfxb3fnddcv6zy1ng"; + sha256 = "19inl7qs2acs59p3gnl5zdsxym0wp2rn05q0zfg7rwf5sjh68amp"; }; outputs = [ "out" ]; diff --git a/pkgs/development/tools/continuous-integration/buildkite-agent/2.x.nix b/pkgs/development/tools/continuous-integration/buildkite-agent/2.x.nix new file mode 100644 index 000000000000..6a73e2581822 --- /dev/null +++ b/pkgs/development/tools/continuous-integration/buildkite-agent/2.x.nix @@ -0,0 +1,12 @@ +{ callPackage, fetchFromGitHub, ... } @ args: + +callPackage ./generic.nix (args // rec { + src = fetchFromGitHub { + owner = "buildkite"; + repo = "agent"; + rev = "v${version}"; + sha256 = "07065hhhb418w5qlqnyiap45r59paysysbwz1l7dmaw3j4q8m8rg"; + }; + version = "2.6.10"; + hasBootstrapScript = true; +}) diff --git a/pkgs/development/tools/continuous-integration/buildkite-agent/3.x.nix b/pkgs/development/tools/continuous-integration/buildkite-agent/3.x.nix new file mode 100644 index 000000000000..2ceaee5650b2 --- /dev/null +++ b/pkgs/development/tools/continuous-integration/buildkite-agent/3.x.nix @@ -0,0 +1,12 @@ +{ callPackage, fetchFromGitHub, ... } @ args: + +callPackage ./generic.nix (args // rec { + src = fetchFromGitHub { + owner = "buildkite"; + repo = "agent"; + rev = "v${version}"; + sha256 = "09smyrzp1xkczlmh8vqb7bmjb2b5d6yf9birjgaw36c6m44bpfvs"; + }; + version = "3.0.1"; + hasBootstrapScript = false; +}) diff --git a/pkgs/development/tools/continuous-integration/buildkite-agent/default.nix b/pkgs/development/tools/continuous-integration/buildkite-agent/generic.nix index 7a5f2f44823b..8aa02ac307dd 100644 --- a/pkgs/development/tools/continuous-integration/buildkite-agent/default.nix +++ b/pkgs/development/tools/continuous-integration/buildkite-agent/generic.nix @@ -1,19 +1,13 @@ -{ stdenv, buildGoPackage, fetchFromGitHub, makeWrapper, coreutils, git, openssh, bash, gnused, gnugrep }: +{ stdenv, buildGoPackage, makeWrapper, coreutils, git, openssh, bash, gnused, gnugrep +, src, version, hasBootstrapScript +, ... }: let - version = "2.6.10"; goPackagePath = "github.com/buildkite/agent"; in buildGoPackage { name = "buildkite-agent-${version}"; - inherit goPackagePath; - - src = fetchFromGitHub { - owner = "buildkite"; - repo = "agent"; - rev = "v${version}"; - sha256 = "07065hhhb418w5qlqnyiap45r59paysysbwz1l7dmaw3j4q8m8rg"; - }; + inherit goPackagePath src; nativeBuildInputs = [ makeWrapper ]; @@ -22,18 +16,20 @@ buildGoPackage { noAuditTmpdir = stdenv.isLinux; postInstall = '' + ${stdenv.lib.optionalString hasBootstrapScript '' # Install bootstrap.sh mkdir -p $bin/libexec/buildkite-agent cp $NIX_BUILD_TOP/go/src/${goPackagePath}/templates/bootstrap.sh $bin/libexec/buildkite-agent sed -e "s|#!/bin/bash|#!${bash}/bin/bash|g" -i $bin/libexec/buildkite-agent/bootstrap.sh + ''} # Fix binary name mv $bin/bin/{agent,buildkite-agent} # These are runtime dependencies wrapProgram $bin/bin/buildkite-agent \ - --prefix PATH : '${stdenv.lib.makeBinPath [ openssh git coreutils gnused gnugrep ]}' \ - --set BUILDKITE_BOOTSTRAP_SCRIPT_PATH $bin/libexec/buildkite-agent/bootstrap.sh + ${stdenv.lib.optionalString hasBootstrapScript "--set BUILDKITE_BOOTSTRAP_SCRIPT_PATH $bin/libexec/buildkite-agent/bootstrap.sh"} \ + --prefix PATH : '${stdenv.lib.makeBinPath [ openssh git coreutils gnused gnugrep ]}' ''; meta = with stdenv.lib; { @@ -47,7 +43,7 @@ buildGoPackage { ''; homepage = https://buildkite.com/docs/agent; license = licenses.mit; - maintainers = with maintainers; [ pawelpacana zimbatm ]; + maintainers = with maintainers; [ pawelpacana zimbatm rvl ]; platforms = platforms.unix; }; } diff --git a/pkgs/development/tools/database/sqldeveloper/default.nix b/pkgs/development/tools/database/sqldeveloper/default.nix index a5d5702029b9..f2c756e30f12 100644 --- a/pkgs/development/tools/database/sqldeveloper/default.nix +++ b/pkgs/development/tools/database/sqldeveloper/default.nix @@ -1,7 +1,21 @@ -{ stdenv, makeWrapper, requireFile, unzip, openjdk }: +{ stdenv, makeDesktopItem, makeWrapper, requireFile, unzip, openjdk }: -stdenv.mkDerivation rec { +let version = "17.4.1.054.0712"; + + desktopItem = makeDesktopItem { + name = "sqldeveloper"; + exec = "sqldeveloper"; + icon = "sqldeveloper"; + desktopName = "Oracle SQL Developer"; + genericName = "Oracle SQL Developer"; + comment = "Oracle's Oracle DB GUI client"; + categories = "Application;Development;"; + }; +in + stdenv.mkDerivation rec { + + inherit version; name = "sqldeveloper-${version}"; src = requireFile rec { @@ -51,6 +65,10 @@ stdenv.mkDerivation rec { cd $out unzip ${src} mv sqldeveloper $out/lib/${name} + + install -D -m 444 $out/lib/$name/icon.png $out/share/pixmaps/sqldeveloper.png + mkdir -p $out/share/applications + cp ${desktopItem}/share/applications/* $out/share/applications ''; meta = with stdenv.lib; { diff --git a/pkgs/development/tools/doctl/default.nix b/pkgs/development/tools/doctl/default.nix index 14c5eab8cd68..be852066bfcc 100644 --- a/pkgs/development/tools/doctl/default.nix +++ b/pkgs/development/tools/doctl/default.nix @@ -4,8 +4,8 @@ buildGoPackage rec { name = "doctl-${version}"; version = "${major}.${minor}.${patch}"; major = "1"; - minor = "7"; - patch = "2"; + minor = "8"; + patch = "0"; goPackagePath = "github.com/digitalocean/doctl"; excludedPackages = ''\(doctl-gen-doc\|install-doctl\|release-doctl\)''; @@ -19,9 +19,9 @@ buildGoPackage rec { src = fetchFromGitHub { owner = "digitalocean"; - repo = "doctl"; - rev = "v${version}"; - sha256 = "1nkyl5274mbdf4j60f2sj0kvvppcpccf7xws11c9vj9c3zxs7r97"; + repo = "doctl"; + rev = "v${version}"; + sha256 = "1h94qagbni8cvzdparmgx3m9qcnbwbk0kjlvy9jzxfd3vcpbg38j"; }; meta = { diff --git a/pkgs/development/tools/gnulib/default.nix b/pkgs/development/tools/gnulib/default.nix index 4ca3bf5e0741..eeaec8eb0335 100644 --- a/pkgs/development/tools/gnulib/default.nix +++ b/pkgs/development/tools/gnulib/default.nix @@ -9,8 +9,12 @@ stdenv.mkDerivation { sha256 = "0sifr3bkmhyr5s6ljgfyr0fw6w49ajf11rlp1r797f3r3r6j9w4k"; }; - installPhase = "mkdir -p $out; mv * $out/"; dontFixup = true; + # no "make install", gnulib is a collection of source code + installPhase = '' + mkdir -p $out; mv * $out/ + ln -s $out/lib $out/include + ''; meta = { homepage = http://www.gnu.org/software/gnulib/; diff --git a/pkgs/development/tools/hcloud/default.nix b/pkgs/development/tools/hcloud/default.nix index e56502a4ad05..c4f6e2565f67 100644 --- a/pkgs/development/tools/hcloud/default.nix +++ b/pkgs/development/tools/hcloud/default.nix @@ -2,14 +2,14 @@ buildGoPackage rec { name = "hcloud-${version}"; - version = "1.3.0"; + version = "1.4.0"; goPackagePath = "github.com/hetznercloud/cli"; src = fetchFromGitHub { owner = "hetznercloud"; repo = "cli"; rev = "v${version}"; - sha256 = "1216qz1kk38vkvfrznjwb65vsbhscqvvrsbp2i6pnf0i85p00pqm"; + sha256 = "1mysw091ddi3abijvciyy73ff31vqq7zb37w30sp3vhm5vq38nn2"; }; buildFlagsArray = [ "-ldflags=" "-X github.com/hetznercloud/cli.Version=${version}" ]; diff --git a/pkgs/development/tools/imatix_gsl/default.nix b/pkgs/development/tools/imatix_gsl/default.nix index 61f211b95802..1d7b22ac5ee0 100644 --- a/pkgs/development/tools/imatix_gsl/default.nix +++ b/pkgs/development/tools/imatix_gsl/default.nix @@ -25,5 +25,6 @@ stdenv.mkDerivation rec { description = "A universal code generator"; platforms = platforms.unix; maintainers = [ maintainers.moosingin3space ]; + broken = stdenv.isLinux; # 2018-04-10 }; } diff --git a/pkgs/development/tools/java/visualvm/default.nix b/pkgs/development/tools/java/visualvm/default.nix index a71ee53dced9..2eeefb23e042 100644 --- a/pkgs/development/tools/java/visualvm/default.nix +++ b/pkgs/development/tools/java/visualvm/default.nix @@ -1,27 +1,27 @@ -{ stdenv, fetchzip, lib, makeWrapper, jdk, gtk2, gawk }: +{ stdenv, fetchzip, lib, makeWrapper, makeDesktopItem, jdk, gtk2, gawk }: stdenv.mkDerivation rec { - name = "visualvm-1.3.9"; + version = "1.4"; + name = "visualvm-${version}"; src = fetchzip { - url = "https://github.com/visualvm/visualvm.src/releases/download/1.3.9/visualvm_139.zip"; - sha256 = "1gkdkxssh51jczhgv680i42jjrlia1vbpcqhxvf45xcq9xj95bm5"; + url = "https://github.com/visualvm/visualvm.src/releases/download/${version}/visualvm_${builtins.replaceStrings ["."] [""] version}.zip"; + sha256 = "0qpkal3yc8c8di4dmdglq54a4m7hciqximn5n6hwx2zqnfwx909z"; + }; + + desktopItem = makeDesktopItem { + name = "visualvm"; + exec = "visualvm"; + comment = "Java Troubleshooting Tool"; + desktopName = "VisualVM"; + genericName = "Java Troubleshooting Tool"; + categories = "Application;Development;"; }; nativeBuildInputs = [ makeWrapper ]; installPhase = '' - rm bin/visualvm.exe - rm platform/lib/nbexec64.exe - rm platform/lib/nbexec.exe - rm profiler/lib/deployed/jdk15/windows-amd64/profilerinterface.dll - rm profiler/lib/deployed/jdk15/windows/profilerinterface.dll - rm profiler/lib/deployed/jdk16/windows-amd64/profilerinterface.dll - rm profiler/lib/deployed/jdk16/windows/profilerinterface.dll - rm platform/modules/lib/amd64/jnidispatch-410.dll - rm platform/modules/lib/x86/jnidispatch-410.dll - rm platform/lib/nbexec.dll - rm platform/lib/nbexec64.dll + find . -type f -name "*.dll" -o -name "*.exe" -delete; substituteInPlace etc/visualvm.conf \ --replace "#visualvm_jdkhome=" "visualvm_jdkhome=" \ @@ -50,6 +50,6 @@ stdenv.mkDerivation rec { homepage = https://visualvm.java.net/; license = licenses.gpl2ClasspathPlus; platforms = platforms.all; - maintainers = with maintainers; [ michalrus ]; + maintainers = with maintainers; [ michalrus moaxcp ]; }; } diff --git a/pkgs/development/tools/jbake/default.nix b/pkgs/development/tools/jbake/default.nix index 70b8e7f26638..f4fb1b5a9e9c 100644 --- a/pkgs/development/tools/jbake/default.nix +++ b/pkgs/development/tools/jbake/default.nix @@ -1,20 +1,20 @@ -{ stdenv, fetchzip, jre }: +{ stdenv, fetchzip, makeWrapper, jre }: stdenv.mkDerivation rec { - version = "2.6.0"; + version = "2.6.1"; name = "jbake-${version}"; src = fetchzip { url = "https://dl.bintray.com/jbake/binary/${name}-bin.zip"; - sha256 = "1k71rz82fwyi51xhyghg8laz794xyz06d5apmxa9psy7yz184ylk"; + sha256 = "0zlh2azmv8gj3c4d4ndivar31wd42nmvhxq6xhn09cib9kffxbc7"; }; - buildInputs = [ jre ]; + buildInputs = [ makeWrapper jre ]; installPhase = '' - substituteInPlace bin/jbake --replace "java" "${jre}/bin/java" mkdir -p $out cp -vr * $out + wrapProgram $out/bin/jbake --set JAVA_HOME "${jre}" ''; meta = with stdenv.lib; { diff --git a/pkgs/development/tools/libsigrokdecode/default.nix b/pkgs/development/tools/libsigrokdecode/default.nix index 0099e574e4ae..9fd70cb60c96 100644 --- a/pkgs/development/tools/libsigrokdecode/default.nix +++ b/pkgs/development/tools/libsigrokdecode/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, pkgconfig, glib, python3, libsigrok, check }: stdenv.mkDerivation rec { - name = "libsigrokdecode-0.5.0"; + name = "libsigrokdecode-0.5.1"; src = fetchurl { url = "https://sigrok.org/download/source/libsigrokdecode/${name}.tar.gz"; - sha256 = "1hfigfj1976qk11kfsgj75l20qvyq8c9p2h4mjw23d59rsg5ga2a"; + sha256 = "07mmb6s62ncqqgsc6szilj2yxixf6gg99ggbzsjlbhp4b9aqnga9"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/development/tools/misc/autoconf-archive/default.nix b/pkgs/development/tools/misc/autoconf-archive/default.nix index 0225a3f81416..cb64a4c876b1 100644 --- a/pkgs/development/tools/misc/autoconf-archive/default.nix +++ b/pkgs/development/tools/misc/autoconf-archive/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "autoconf-archive-${version}"; - version = "2017.09.28"; + version = "2018.03.13"; src = fetchurl { url = "mirror://gnu/autoconf-archive/autoconf-archive-${version}.tar.xz"; - sha256 = "00gsh9hkrgg291my98plkrwlcpxkfrpq64pglf18kciqbf2bb7sw"; + sha256 = "0ng1lvpijf3kv7w7nb1shqs23vp0398yicyvkf9lsk56kw6zjxb1"; }; buildInputs = [ xz ]; diff --git a/pkgs/development/tools/misc/avarice/default.nix b/pkgs/development/tools/misc/avarice/default.nix index ca6cb14c2a43..a8f6426a3b7b 100644 --- a/pkgs/development/tools/misc/avarice/default.nix +++ b/pkgs/development/tools/misc/avarice/default.nix @@ -18,6 +18,7 @@ stdenv.mkDerivation rec { homepage = https://sourceforge.net/projects/avarice/files/avarice/; maintainers = [ stdenv.lib.maintainers.smironov ]; platforms = stdenv.lib.platforms.linux; + broken = true; # 2018-04-10 }; } diff --git a/pkgs/development/tools/misc/binutils/default.nix b/pkgs/development/tools/misc/binutils/default.nix index 5c88902a68c4..e65736a3e887 100644 --- a/pkgs/development/tools/misc/binutils/default.nix +++ b/pkgs/development/tools/misc/binutils/default.nix @@ -1,5 +1,5 @@ { stdenv, buildPackages -, fetchurl, zlib +, fetchurl, zlib, autoreconfHook264 , buildPlatform, hostPlatform, targetPlatform , noSysDirs, gold ? true, bison ? null }: @@ -64,12 +64,16 @@ stdenv.mkDerivation rec { # https://sourceware.org/bugzilla/show_bug.cgi?id=22868 ./gold-symbol-visibility.patch - ]; + ] ++ stdenv.lib.optional targetPlatform.isiOS ./support-ios.patch; outputs = [ "out" "info" "man" ]; depsBuildBuild = [ buildPackages.stdenv.cc ]; - nativeBuildInputs = [ bison ]; + nativeBuildInputs = [ + bison + ] ++ stdenv.lib.optionals targetPlatform.isiOS [ + autoreconfHook264 + ]; buildInputs = [ zlib ]; inherit noSysDirs; @@ -96,7 +100,7 @@ stdenv.mkDerivation rec { # TODO(@Ericson2314): Always pass "--target" and always targetPrefix. configurePlatforms = # TODO(@Ericson2314): Figure out what's going wrong with Arm - if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isArm + if buildPlatform == hostPlatform && hostPlatform == targetPlatform && targetPlatform.isAarch32 then [] else [ "build" "host" ] ++ stdenv.lib.optional (targetPlatform != hostPlatform) "target"; diff --git a/pkgs/development/tools/misc/binutils/support-ios.patch b/pkgs/development/tools/misc/binutils/support-ios.patch new file mode 100644 index 000000000000..919a3920727f --- /dev/null +++ b/pkgs/development/tools/misc/binutils/support-ios.patch @@ -0,0 +1,112 @@ +diff --git a/bfd/config.bfd b/bfd/config.bfd +index f04a993f06..3357022f35 100644 +--- a/bfd/config.bfd ++++ b/bfd/config.bfd +@@ -238,7 +238,7 @@ case "${targ}" in + + # START OF targmatch.h + #ifdef BFD64 +- aarch64-*-darwin*) ++ aarch64-*-darwin* | aarch64-*-ios*) + targ_defvec=aarch64_mach_o_vec + targ_selvecs="arm_mach_o_vec mach_o_le_vec mach_o_be_vec mach_o_fat_vec" + targ_archs="$targ_archs bfd_i386_arch bfd_powerpc_arch bfd_rs6000_arch" +@@ -358,7 +358,7 @@ case "${targ}" in + targ_selvecs=arc_elf32_be_vec + ;; + +- arm-*-darwin*) ++ arm-*-darwin* | arm-*-ios*) + targ_defvec=arm_mach_o_vec + targ_selvecs="mach_o_le_vec mach_o_be_vec mach_o_fat_vec" + targ_archs="$targ_archs bfd_i386_arch bfd_powerpc_arch bfd_rs6000_arch" +diff --git a/configure.ac b/configure.ac +index aae94501e4..4b1121e0d1 100644 +--- a/configure.ac ++++ b/configure.ac +@@ -510,7 +510,7 @@ if test x$enable_libgomp = x ; then + ;; + *-*-solaris2* | *-*-hpux11*) + ;; +- *-*-darwin* | *-*-aix*) ++ *-*-darwin* | *-*-ios* | *-*-aix*) + ;; + nvptx*-*-*) + ;; +@@ -706,7 +706,7 @@ case "${target}" in + ;; + x86_64-*-darwin[[912]]*) + ;; +- *-*-darwin*) ++ *-*-darwin* | *-*-ios*) + noconfigdirs="$noconfigdirs target-libffi" + ;; + *-*-netware*) +@@ -788,7 +788,7 @@ esac + # Disable the go frontend on systems where it is known to not work. Please keep + # this in sync with contrib/config-list.mk. + case "${target}" in +-*-*-darwin* | *-*-cygwin* | *-*-mingw*) ++*-*-darwin* | *-*-ios* | *-*-cygwin* | *-*-mingw*) + unsupported_languages="$unsupported_languages go" + ;; + esac +@@ -797,7 +797,7 @@ esac + # For testing, you can easily override this with --enable-libgo. + if test x$enable_libgo = x; then + case "${target}" in +- *-*-darwin*) ++ *-*-darwin* | *-*-ios*) + # PR 46986 + noconfigdirs="$noconfigdirs target-libgo" + ;; +@@ -916,11 +916,11 @@ esac + case "${target}" in + *-*-chorusos) + ;; +- aarch64-*-darwin*) ++ aarch64-*-darwin* | aarch64-*-ios*) + noconfigdirs="$noconfigdirs ld gas gdb gprof" + noconfigdirs="$noconfigdirs sim target-rda" + ;; +- arm-*-darwin*) ++ arm-*-darwin* | arm-*-ios*) + noconfigdirs="$noconfigdirs ld gas gdb gprof" + noconfigdirs="$noconfigdirs sim target-rda" + ;; +@@ -936,7 +936,7 @@ case "${target}" in + noconfigdirs="$noconfigdirs ld gas gprof" + noconfigdirs="$noconfigdirs sim target-rda" + ;; +- *-*-darwin*) ++ *-*-darwin* | *-*-ios*) + noconfigdirs="$noconfigdirs ld gas gdb gprof" + noconfigdirs="$noconfigdirs sim target-rda" + ;; +@@ -1226,7 +1226,7 @@ case "${host}" in + hppa*-*) + host_makefile_frag="config/mh-pa" + ;; +- *-*-darwin*) ++ *-*-darwin* | *-*-ios*) + host_makefile_frag="config/mh-darwin" + ;; + powerpc-*-aix*) +@@ -1708,7 +1708,7 @@ ACX_ELF_TARGET_IFELSE([# ELF platforms build the lto-plugin always. + # warn during gcc/ subconfigure; unless you're bootstrapping with + # -flto it won't be needed until after installation anyway. + case $target in +- *-cygwin* | *-mingw* | *-apple-darwin* | *djgpp*) ;; ++ *-cygwin* | *-mingw* | *-apple-darwin* | *-apple-ios* | *djgpp*) ;; + *) if test x"$enable_lto" = x"yes"; then + AC_MSG_ERROR([LTO support is not enabled for this target.]) + fi +@@ -2590,7 +2590,7 @@ rm -f conftest* + # Decide which environment variable is used to find dynamic libraries. + case "${host}" in + *-*-hpux*) RPATH_ENVVAR=SHLIB_PATH ;; +- *-*-darwin*) RPATH_ENVVAR=DYLD_LIBRARY_PATH ;; ++ *-*-darwin* | *-*-ios* ) RPATH_ENVVAR=DYLD_LIBRARY_PATH ;; + *-*-mingw* | *-*-cygwin ) RPATH_ENVVAR=PATH ;; + *) RPATH_ENVVAR=LD_LIBRARY_PATH ;; + esac diff --git a/pkgs/development/tools/misc/gede/default.nix b/pkgs/development/tools/misc/gede/default.nix index 9e2f35875583..9e8ce3d93314 100644 --- a/pkgs/development/tools/misc/gede/default.nix +++ b/pkgs/development/tools/misc/gede/default.nix @@ -1,26 +1,24 @@ -{ stdenv, fetchurl, makeWrapper, python, qt4, ctags, gdb }: +{ stdenv, fetchurl, makeWrapper, python, qmake, ctags, gdb }: stdenv.mkDerivation rec { name = "gede-${version}"; - version = "2.0.4"; + version = "2.6.1"; src = fetchurl { url = "http://gede.acidron.com/uploads/source/${name}.tar.xz"; - sha256 = "0ip86ss35sc330p4aykv5qj74jbdwh38i928w1bxb6g3w0xmfqba"; + sha256 = "0jallpchl3c3i90hwic4n7n0ggk5wra0fki4by9ag26ln0k42c4r"; }; - nativeBuildInputs = [ makeWrapper python ]; + nativeBuildInputs = [ qmake makeWrapper python ]; - buildInputs = [ qt4 ]; + buildInputs = [ ctags ]; - postPatch = '' - sed -i build.py -e 's,qmake-qt4,qmake,' - ''; + dontUseQmakeConfigure = true; buildPhase = ":"; installPhase = '' - python build.py install --prefix="$out" + python build.py install --verbose --prefix="$out" wrapProgram $out/bin/gede \ --prefix PATH : ${stdenv.lib.makeBinPath [ ctags gdb ]} ''; diff --git a/pkgs/development/tools/misc/hydra/default.nix b/pkgs/development/tools/misc/hydra/default.nix index cf9057d35e2c..4fdd017306ac 100644 --- a/pkgs/development/tools/misc/hydra/default.nix +++ b/pkgs/development/tools/misc/hydra/default.nix @@ -1,4 +1,4 @@ -{ stdenv, nixUnstable, perlPackages, buildEnv, releaseTools, fetchFromGitHub +{ stdenv, nix, perlPackages, buildEnv, releaseTools, fetchFromGitHub , makeWrapper, autoconf, automake, libtool, unzip, pkgconfig, sqlite, libpqxx , gitAndTools, mercurial, darcs, subversion, bazaar, openssl, bzip2, libxslt , guile, perl, postgresql, aws-sdk-cpp, nukeReferences, git, boehmgc @@ -27,6 +27,7 @@ let CatalystViewDownload CatalystViewJSON CatalystViewTT + CatalystXRoleApplicator CatalystXScriptServerStarman CryptRandPasswd DBDPg @@ -39,6 +40,7 @@ let FileSlurp IOCompress IPCRun + JSONAny JSONXS LWP LWPProtocolHttps @@ -54,8 +56,8 @@ let TextDiff TextTable XMLSimple - nixUnstable - nixUnstable.perl-bindings + nix + nix.perl-bindings git boehmgc ]; @@ -77,12 +79,12 @@ in releaseTools.nixBuild rec { [ makeWrapper autoconf automake libtool unzip nukeReferences pkgconfig sqlite libpqxx gitAndTools.topGit mercurial darcs subversion bazaar openssl bzip2 libxslt guile # optional, for Guile + Guix support - perlDeps perl nixUnstable + perlDeps perl nix postgresql # for running the tests ]; hydraPath = lib.makeBinPath ( - [ sqlite subversion openssh nixUnstable coreutils findutils pixz + [ sqlite subversion openssh nix coreutils findutils pixz gzip bzip2 lzma gnutar unzip git gitAndTools.topGit mercurial darcs gnused bazaar ] ++ lib.optionals stdenv.isLinux [ rpm dpkg cdrkit ] ); @@ -117,7 +119,7 @@ in releaseTools.nixBuild rec { --prefix PATH ':' $out/bin:$hydraPath \ --set HYDRA_RELEASE ${version} \ --set HYDRA_HOME $out/libexec/hydra \ - --set NIX_RELEASE ${nixUnstable.name or "unknown"} + --set NIX_RELEASE ${nix.name or "unknown"} done ''; # */ diff --git a/pkgs/development/tools/misc/kibana/5.x.nix b/pkgs/development/tools/misc/kibana/5.x.nix index 78b5df21fdea..4aa9dc8b89a0 100644 --- a/pkgs/development/tools/misc/kibana/5.x.nix +++ b/pkgs/development/tools/misc/kibana/5.x.nix @@ -11,9 +11,9 @@ let elasticArch = archOverrides."${arch}" or arch; plat = elemAt info 1; shas = { - "x86_64-linux" = "1a9n7s9r0klqvpyr5d3a410cchbsb0syx6cqwbhhnihqyw8dcx1i"; - "i686-linux" = "0snnm5jwynvk6ahgl42yzl2jhld0ykn79rlcq9dsv2gpqnjb2mmv"; - "x86_64-darwin" = "0qw3xkj3n3aja8s8n9r4hbr65jm9m6dgfjhhnrln434648rx7z4v"; + "x86_64-linux" = "1rg4j5jm8mkscrwlbx5qk3qjnblyr8z9x5npvyi73zm0ism0gv4j"; + "i686-linux" = "14swgx9sf23pns2pj30yyhd0p0rnykdimdrnj8rb0r1pqszw57qx"; + "x86_64-darwin" = "10l13r47nx74xicnjgb56nvgvx2al1zx1p8f09pjldaa2gjlll2k"; }; in stdenv.mkDerivation rec { name = "kibana-${version}"; diff --git a/pkgs/development/tools/misc/kibana/6.x.nix b/pkgs/development/tools/misc/kibana/6.x.nix index d7013ef46eb2..17620c9df6c8 100644 --- a/pkgs/development/tools/misc/kibana/6.x.nix +++ b/pkgs/development/tools/misc/kibana/6.x.nix @@ -7,8 +7,8 @@ let arch = elemAt info 0; plat = elemAt info 1; shas = { - "x86_64-linux" = "0kgsafjn8wzrmiklfc8jg0h3cx25lhlkby8yz35wgpx4wbk3vfjx"; - "x86_64-darwin" = "0i2kq9vyjv151kk7h3dl3hjrqqgxsg0qqxdqwjwlz9ja5axzlxhd"; + "x86_64-linux" = "1br9nvwa3i5sfcbnrxp2x3dxxnsbs9iavz6zwgw0jlh5ngf5vysk"; + "x86_64-darwin" = "1w4dck02i0rrl8m18kvy2zz02cb7bb9a2pdhkd1jfy1qz4ssnhii"; }; in stdenv.mkDerivation rec { name = "kibana-${version}"; diff --git a/pkgs/development/tools/misc/lsof/darwin-dfile.patch b/pkgs/development/tools/misc/lsof/darwin-dfile.patch new file mode 100644 index 000000000000..9952228e613a --- /dev/null +++ b/pkgs/development/tools/misc/lsof/darwin-dfile.patch @@ -0,0 +1,12 @@ +diff -Naur a/dialects/darwin/libproc/dfile.c b/dialects/darwin/libproc/dfile.c +--- a/dialects/darwin/libproc/dfile.c 2018-02-14 09:28:06.000000000 -0500 ++++ b/dialects/darwin/libproc/dfile.c 2018-04-16 18:52:40.828715293 -0400 +@@ -43,7 +43,7 @@ + #include "lsof.h" + + #if defined(PROC_FP_GUARDED) +-#extern struct pff_tab Pgf_tab[]; ++extern struct pff_tab Pgf_tab[]; + #endif /* defined(PROC_FP_GUARDED) */ + + diff --git a/pkgs/development/tools/misc/lsof/default.nix b/pkgs/development/tools/misc/lsof/default.nix index 53b960a7c031..005fb09fba09 100644 --- a/pkgs/development/tools/misc/lsof/default.nix +++ b/pkgs/development/tools/misc/lsof/default.nix @@ -4,13 +4,13 @@ let dialect = with stdenv.lib; last (splitString "-" stdenv.system); in stdenv.mkDerivation rec { name = "lsof-${version}"; - version = "4.90"; + version = "4.91"; depsBuildBuild = [ buildPackages.stdenv.cc ]; buildInputs = [ ncurses ]; src = fetchurl { - urls = ["https://fossies.org/linux/misc/lsof_4.90.tar.bz2"] ++ # Mirrors seem to be down... + urls = ["https://fossies.org/linux/misc/lsof_${version}.tar.bz2"] ++ # Mirrors seem to be down... ["ftp://lsof.itap.purdue.edu/pub/tools/unix/lsof/lsof_${version}.tar.bz2"] ++ map ( # the tarball is moved after new version is released @@ -23,13 +23,17 @@ stdenv.mkDerivation rec { + "${stdenv.lib.optionalString isOld "OLD/"}lsof_${version}.tar.bz2" ) [ false true ] ; - sha256 = "1xhn3amvl5mmwji5g90nkw7lfmh2494v18qbv1f729hrg468853g"; + sha256 = "18sh4hbl9jw2szkf0gvgan8g13f3g4c6s2q9h3zq5gsza9m99nn9"; }; unpackPhase = "tar xvjf $src; cd lsof_*; tar xvf lsof_*.tar; sourceRoot=$( echo lsof_*/); "; + patches = stdenv.lib.optional stdenv.isDarwin ./darwin-dfile.patch; + postPatch = stdenv.lib.optionalString stdenv.hostPlatform.isMusl '' substituteInPlace dialects/linux/dlsof.h --replace "defined(__UCLIBC__)" 1 + '' + stdenv.lib.optionalString stdenv.isDarwin '' + sed -i 's|lcurses|lncurses|g' Configure ''; # Stop build scripts from searching global include paths diff --git a/pkgs/development/tools/misc/uhd/default.nix b/pkgs/development/tools/misc/uhd/default.nix index 2ea87fe6d7f1..011d0b3e80b9 100644 --- a/pkgs/development/tools/misc/uhd/default.nix +++ b/pkgs/development/tools/misc/uhd/default.nix @@ -38,14 +38,14 @@ in stdenv.mkDerivation { # /nix/store/wd6r25miqbk9ia53pp669gn4wrg9n9cj-gcc-7.3.0/include/c++/7.3.0/bits/vector.tcc:394:7: note: parameter passing for argument of type 'std::vector<uhd::range_t>::iterator {aka __gnu_cxx::__normal_iterator<uhd::range_t*, std::vector<uhd::range_t> >}' changed in GCC 7.1 cmakeFlags = [ "-DLIBUSB_INCLUDE_DIRS=${libusb1.dev}/include/libusb-1.0"] ++ - [ (stdenv.lib.optionalString stdenv.isArm "-DCMAKE_CXX_FLAGS=-Wno-psabi") ]; + [ (stdenv.lib.optionalString stdenv.isAarch32 "-DCMAKE_CXX_FLAGS=-Wno-psabi") ]; nativeBuildInputs = [ cmake pkgconfig ]; buildInputs = [ python pythonPackages.pyramid_mako orc libusb1 boost ]; # Build only the host software preConfigure = "cd host"; - patches = if stdenv.isArm then ./neon.patch else null; + patches = if stdenv.isAarch32 then ./neon.patch else null; postPhases = [ "installFirmware" ]; diff --git a/pkgs/development/tools/mypy/default.nix b/pkgs/development/tools/mypy/default.nix index e0288b686efe..fd21a8a23d34 100644 --- a/pkgs/development/tools/mypy/default.nix +++ b/pkgs/development/tools/mypy/default.nix @@ -2,14 +2,14 @@ buildPythonApplication rec { pname = "mypy"; - version = "0.580"; + version = "0.590"; # Tests not included in pip package. doCheck = false; src = fetchPypi { inherit pname version; - sha256 = "3bd95a1369810f7693366911d85be9f0a0bd994f6cb7162b7a994e5ded90e3d9"; + sha256 = "0ynyrrj0wjyw130ay9x1ca88lbhbblp06bfsjrpzbcvp4grgxgq4"; }; propagatedBuildInputs = [ lxml typed-ast psutil ]; diff --git a/pkgs/development/tools/ocaml/findlib/default.nix b/pkgs/development/tools/ocaml/findlib/default.nix index 6f136a7ef289..e25b94714b68 100644 --- a/pkgs/development/tools/ocaml/findlib/default.nix +++ b/pkgs/development/tools/ocaml/findlib/default.nix @@ -1,22 +1,33 @@ { stdenv, fetchurl, fetchpatch, m4, ncurses, ocaml, writeText }: +let param = + if stdenv.lib.versionAtLeast ocaml.version "4" + then { + version = "1.8.0"; + sha256 = "1b97zqjdriqd2ikgh4rmqajgxwdwn013riji5j53y3xvcmnpsyrb"; + } else { + version = "1.7.3"; + sha256 = "12xx8si1qv3xz90qsrpazjjk4lc1989fzm97rsmc4diwla7n15ni"; + patches = [ (fetchpatch { + url = "https://raw.githubusercontent.com/ocaml/opam-repository/1f29c5ef8eccd373e5ff2169a30bfd95a9ae6050/packages/ocamlfind/ocamlfind.1.7.3-1/files/threads.patch"; + sha256 = "0cqgpjqpmfbr0ph3jr25gw8hgckj4qlfwmir6vkgi5hvn2qnjpx3"; + }) ]; + }; +in + stdenv.mkDerivation rec { name = "ocaml-findlib-${version}"; - version = "1.7.3"; + inherit (param) version; src = fetchurl { url = "http://download.camlcity.org/download/findlib-${version}.tar.gz"; - sha256 = "12xx8si1qv3xz90qsrpazjjk4lc1989fzm97rsmc4diwla7n15ni"; + inherit (param) sha256; }; buildInputs = [m4 ncurses ocaml]; - patches = [ ./ldconf.patch ./install_topfind.patch - (fetchpatch { - url = "https://raw.githubusercontent.com/ocaml/opam-repository/1f29c5ef8eccd373e5ff2169a30bfd95a9ae6050/packages/ocamlfind/ocamlfind.1.7.3-1/files/threads.patch"; - sha256 = "0cqgpjqpmfbr0ph3jr25gw8hgckj4qlfwmir6vkgi5hvn2qnjpx3"; - }) - ]; + patches = [ ./ldconf.patch ./install_topfind.patch ] + ++ (param.patches or []); dontAddPrefix=true; diff --git a/pkgs/development/tools/ocaml/js_of_ocaml/tyxml.nix b/pkgs/development/tools/ocaml/js_of_ocaml/tyxml.nix new file mode 100644 index 000000000000..041fd71f92fa --- /dev/null +++ b/pkgs/development/tools/ocaml/js_of_ocaml/tyxml.nix @@ -0,0 +1,16 @@ +{ stdenv, ocaml, findlib, jbuilder, js_of_ocaml-compiler +, js_of_ocaml-ppx, ocaml-migrate-parsetree, ppx_tools_versioned +, js_of_ocaml, reactivedata, tyxml +}: + +stdenv.mkDerivation rec { + name = "js_of_ocaml-tyxml-${version}"; + + inherit (js_of_ocaml-compiler) version src installPhase meta; + + buildInputs = [ ocaml findlib jbuilder js_of_ocaml-ppx ocaml-migrate-parsetree ppx_tools_versioned ]; + + propagatedBuildInputs = [ js_of_ocaml reactivedata tyxml ]; + + buildPhase = "jbuilder build -p js_of_ocaml-tyxml"; +} diff --git a/pkgs/development/qtcreator/default.nix b/pkgs/development/tools/qtcreator/default.nix index de94b7a8eff3..de94b7a8eff3 100644 --- a/pkgs/development/qtcreator/default.nix +++ b/pkgs/development/tools/qtcreator/default.nix diff --git a/pkgs/development/tools/react-native-debugger/default.nix b/pkgs/development/tools/react-native-debugger/default.nix new file mode 100644 index 000000000000..5e88384c58db --- /dev/null +++ b/pkgs/development/tools/react-native-debugger/default.nix @@ -0,0 +1,83 @@ +{ stdenv, fetchurl, unzip, cairo, xorg, gdk_pixbuf, fontconfig, pango, gnome2, atk, gtk2, glib +, freetype, dbus, nss, nspr, alsaLib, cups, expat, libudev, makeDesktopItem +}: + +let + rpath = stdenv.lib.makeLibraryPath [ + cairo + stdenv.cc.cc + gdk_pixbuf + fontconfig + pango + atk + gtk2 + glib + freetype + dbus + nss + nspr + alsaLib + cups + expat + libudev + + gnome2.GConf + + xorg.libX11 + xorg.libXcursor + xorg.libXtst + xorg.libxcb + xorg.libXext + xorg.libXi + xorg.libXdamage + xorg.libXrandr + xorg.libXcomposite + xorg.libXfixes + xorg.libXrender + xorg.libXScrnSaver + ]; +in stdenv.mkDerivation rec { + name = "react-native-debugger-${version}"; + version = "0.7.18"; + + src = fetchurl { + url = "https://github.com/jhen0409/react-native-debugger/releases/download/v${version}/rn-debugger-linux-x64.zip"; + sha256 = "186n438sy9wzrx2zdw4qq4hsz89wiy01bpfa6fdjisvxgz6r8sgw"; + }; + + buildInputs = [ unzip ]; + buildCommand = '' + shopt -s extglob + mkdir -p $out + unzip $src -d $out + + mkdir $out/{lib,bin,share} + mv $out/lib{node,ffmpeg}.so $out/lib + mv $out/!(lib|share|bin) $out/share + + patchelf \ + --set-interpreter $(cat $NIX_CC/nix-support/dynamic-linker) \ + --set-rpath ${rpath}:$out/lib \ + $out/share/React\ Native\ Debugger + + ln -s $out/share/React\ Native\ Debugger $out/bin/React\ Native\ Debugger + + install -Dm644 "${desktopItem}/share/applications/"* \ + -t $out/share/applications/ + ''; + + desktopItem = makeDesktopItem { + name = "rndebugger"; + exec = "React\\ Native\\ Debugger"; + desktopName = "React Native Debugger"; + genericName = "React Native Debugger"; + categories = "Development;Tools;"; + }; + + meta = with stdenv.lib; { + homepage = https://github.com/jhen0409/react-native-debugger; + license = licenses.mit; + description = "The standalone app based on official debugger of React Native, and includes React Inspector / Redux DevTools"; + maintainers = with maintainers; [ ma27 ]; + }; +} diff --git a/pkgs/development/tools/remarshal/default.nix b/pkgs/development/tools/remarshal/default.nix index baba4fd75ea9..23c9768f7e05 100644 --- a/pkgs/development/tools/remarshal/default.nix +++ b/pkgs/development/tools/remarshal/default.nix @@ -1,7 +1,7 @@ -{ stdenv, pythonPackages, fetchFromGitHub }: +{ stdenv, python3Packages, fetchFromGitHub }: -pythonPackages.buildPythonApplication rec { - name = "remarshal-${version}"; +python3Packages.buildPythonApplication rec { + pname = "remarshal"; version = "0.7.0"; src = fetchFromGitHub { @@ -11,10 +11,8 @@ pythonPackages.buildPythonApplication rec { sha256 = "1wsgvzfp40lvly7nyyhv9prip4vi32rfc8kdji587jpw28zc1dfb"; }; - propagatedBuildInputs = with pythonPackages; [ - dateutil - pytoml - pyyaml + propagatedBuildInputs = with python3Packages; [ + dateutil pytoml pyyaml ]; meta = with stdenv.lib; { diff --git a/pkgs/development/tools/selenium/chromedriver/default.nix b/pkgs/development/tools/selenium/chromedriver/default.nix index cc56e57794a2..d865a20fbb9f 100644 --- a/pkgs/development/tools/selenium/chromedriver/default.nix +++ b/pkgs/development/tools/selenium/chromedriver/default.nix @@ -6,7 +6,7 @@ let allSpecs = { "x86_64-linux" = { system = "linux64"; - sha256 = "1pryrz4ry0pk6kawvj8sxhpqh6c6npxhm187412y2l598dcf9pwl"; + sha256 = "1h7avlns00hd44ayi53lvdj2l85h9higky0jk7bad07hm39nagks"; }; "x86_64-darwin" = { @@ -28,7 +28,7 @@ let in stdenv.mkDerivation rec { name = "chromedriver-${version}"; - version = "2.37"; + version = "2.38"; src = fetchurl { url = "http://chromedriver.storage.googleapis.com/${version}/chromedriver_${spec.system}.zip"; diff --git a/pkgs/development/tools/tradcpp/default.nix b/pkgs/development/tools/tradcpp/default.nix index e5a3004bfdb6..3891617e1c79 100644 --- a/pkgs/development/tools/tradcpp/default.nix +++ b/pkgs/development/tools/tradcpp/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, autoconf }: stdenv.mkDerivation { - name = "tradcpp-0.4"; + name = "tradcpp-0.5.2"; src = fetchurl { - url = http://ftp.netbsd.org/pub/NetBSD/misc/dholland/tradcpp-0.4.tar.gz; - sha256 = "c60aa356945e0b6634bd449ead6a4fca0059d2ce3ae8044cf982140bbd54e688"; + url = http://ftp.netbsd.org/pub/NetBSD/misc/dholland/tradcpp-0.5.2.tar.gz; + sha256 = "1h2bwxwc13rz3g2236l89hm47f72hn3m4h7wjir3j532kq0m68bc"; }; # tradcpp only comes with BSD-make Makefile; the patch adds configure support diff --git a/pkgs/development/tools/yarn/default.nix b/pkgs/development/tools/yarn/default.nix index bd7dd5924c06..eefe7dcfa74a 100644 --- a/pkgs/development/tools/yarn/default.nix +++ b/pkgs/development/tools/yarn/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "yarn-${version}"; - version = "1.5.1"; + version = "1.6.0"; src = fetchzip { url = "https://github.com/yarnpkg/yarn/releases/download/v${version}/yarn-v${version}.tar.gz"; - sha256 = "13m1y1c2h1fvq8fw1vlmnmnh3jx3l2cx7mz3x55sbgwcinzhkz9m"; + sha256 = "0bblp1jy4s9y5rpcqn40w61qwsmxr342xkcn7ykk88i7sng2cgfw"; }; buildInputs = [makeWrapper nodejs]; diff --git a/pkgs/development/web/grails/default.nix b/pkgs/development/web/grails/default.nix index 80731de84fb2..a0d8a0b84bac 100644 --- a/pkgs/development/web/grails/default.nix +++ b/pkgs/development/web/grails/default.nix @@ -11,11 +11,11 @@ let in stdenv.mkDerivation rec { name = "grails-${version}"; - version = "3.3.3"; + version = "3.3.5"; src = fetchurl { url = "https://github.com/grails/grails-core/releases/download/v${version}/grails-${version}.zip"; - sha256 = "087bd1vjpg0wghqbkyldmzma7ziqi7hf745chfr31x8cn5ys0jji"; + sha256 = "0796jbcblr3vxdf6sngzcfs1m24d1ra1n8jc7cnfrfxpf8r0z15m"; }; buildInputs = [ unzip ]; diff --git a/pkgs/development/web/postman/default.nix b/pkgs/development/web/postman/default.nix index 48f76e9e85d2..c51e1595ee72 100644 --- a/pkgs/development/web/postman/default.nix +++ b/pkgs/development/web/postman/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "postman-${version}"; - version = "5.5.2"; + version = "5.5.3"; src = fetchurl { url = "https://dl.pstmn.io/download/version/${version}/linux64"; - sha1 = "68886197A8375E860AB880547838FEFC9E12FC64"; + sha1 = "BC0C6117BEC6D1638FD18A0E2A580617669A9297"; name = "${name}.tar.gz"; }; @@ -16,10 +16,15 @@ stdenv.mkDerivation rec { buildPhase = ":"; # nothing to build + icon = fetchurl { + url = "https://www.getpostman.com/img-rebrand/logo.png"; + sha256 = "0jdhl9c07b1723j2f172z3s5p5lh8sqa1rcvdzz3h6z5zwn21g7v"; + }; + desktopItem = makeDesktopItem { name = "postman"; exec = "postman"; - icon = "$out/share/postman/resources/app/assets/icon.png"; + icon = "${icon}"; comment = "API Development Environment"; desktopName = "Postman"; genericName = "Postman"; @@ -28,10 +33,12 @@ stdenv.mkDerivation rec { installPhase = '' mkdir -p $out/share/postman - mkdir -p $out/share/applications cp -R * $out/share/postman + mkdir -p $out/bin ln -s $out/share/postman/Postman $out/bin/postman + + mkdir -p $out/share/applications ln -s ${desktopItem}/share/applications/* $out/share/applications/ ''; diff --git a/pkgs/games/asc/default.nix b/pkgs/games/asc/default.nix index e532fb75e0b9..6b7ead6d2030 100644 --- a/pkgs/games/asc/default.nix +++ b/pkgs/games/asc/default.nix @@ -1,6 +1,6 @@ { fetchurl, stdenv, SDL, SDL_image, SDL_mixer, SDL_sound, libsigcxx, physfs -, boost, expat, freetype, libjpeg, wxGTK, lua, perl, pkgconfig, zlib, zip, bzip2, -libpng, libtiff, fluidsynth, libmikmod }: +, boost, expat, freetype, libjpeg, wxGTK, lua, perl, pkgconfig, zlib, zip, bzip2 +, libpng, libtiff, fluidsynth, libmikmod, libvorbis, flac, libogg }: stdenv.mkDerivation rec { name = "asc-2.6.0.0"; @@ -18,7 +18,7 @@ stdenv.mkDerivation rec { buildInputs = [ SDL SDL_image SDL_mixer SDL_sound libsigcxx physfs boost expat freetype libjpeg wxGTK lua perl pkgconfig zlib zip bzip2 libpng - libtiff fluidsynth libmikmod + libtiff fluidsynth libmikmod flac libvorbis libogg ]; meta = with stdenv.lib; { @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { longDescription = '' Advanced Strategic Command is a free, turn based strategy game. It is designed in the tradition of the Battle Isle series from Bluebyte and is - currently available for Windows and Linux. + currently available for Windows and Linux. ''; homepage = http://www.asc-hq.org/; diff --git a/pkgs/games/dwarf-fortress/dfhack/default.nix b/pkgs/games/dwarf-fortress/dfhack/default.nix index e716bdcbb026..641676489ed9 100644 --- a/pkgs/games/dwarf-fortress/dfhack/default.nix +++ b/pkgs/games/dwarf-fortress/dfhack/default.nix @@ -4,13 +4,13 @@ }: let - dfVersion = "0.44.05"; - version = "${dfVersion}-r2"; + dfVersion = "0.44.09"; + version = "${dfVersion}-r1"; rev = "refs/tags/${version}"; sha256 = "1cwifdhi48a976xc472nf6q2k0ibwqffil5a4llcymcxdbgxdcc9"; # revision of library/xml submodule - xmlRev = "2794f8a6d7405d4858bac486a0bb17b94740c142"; + xmlRev = "3c0bf63674d5430deadaf7befaec42f0ec1e8bc5"; arch = if stdenv.system == "x86_64-linux" then "64" diff --git a/pkgs/games/dwarf-fortress/dwarf-therapist/default.nix b/pkgs/games/dwarf-fortress/dwarf-therapist/default.nix index aaef90954b12..29cc2dc62857 100644 --- a/pkgs/games/dwarf-fortress/dwarf-therapist/default.nix +++ b/pkgs/games/dwarf-fortress/dwarf-therapist/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "dwarf-therapist-original-${version}"; - version = "39.2.1"; + version = "39.3.1"; src = fetchFromGitHub { owner = "Dwarf-Therapist"; repo = "Dwarf-Therapist"; rev = "v${version}"; - sha256 = "1dgcn1a4sz649kj94ldqy4ms7zhwpaj3q4r86b0yfh6dda8jzlgp"; + sha256 = "0vb0dg1r833gaa4jzlrxf9acn41az3xjs9alx7r9lkqwvkjyrdy2"; }; outputs = [ "out" "layouts" ]; diff --git a/pkgs/games/dwarf-fortress/game.nix b/pkgs/games/dwarf-fortress/game.nix index 8a85578172a9..79dd46c21919 100644 --- a/pkgs/games/dwarf-fortress/game.nix +++ b/pkgs/games/dwarf-fortress/game.nix @@ -4,7 +4,7 @@ let baseVersion = "44"; - patchVersion = "05"; + patchVersion = "09"; dfVersion = "0.${baseVersion}.${patchVersion}"; libpath = lib.makeLibraryPath [ stdenv.cc.cc stdenv.glibc dwarf-fortress-unfuck SDL ]; platform = @@ -12,8 +12,8 @@ let else if stdenv.system == "i686-linux" then "linux32" else throw "Unsupported platform"; sha256 = - if stdenv.system == "x86_64-linux" then "18bjyhjp5458bfbizm8vq4s00pqpfs097qp6pv76m84kgbc4ghg3" - else if stdenv.system == "i686-linux" then "1b9i4kf4c8s6bhqwn8jx100mg7fqp8nmswrai5w8dsma01py4amr" + if stdenv.system == "x86_64-linux" then "1haikynkg1pqyrzzqk1qxm19p36ww58qp8brh3fjxssp4x71rcdy" + else if stdenv.system == "i686-linux" then "0lmbrdf7wjdwj5yx0khnq871yxvhfwqxjjyfkqcdy5ik18lvlkj8" else throw "Unsupported platform"; in diff --git a/pkgs/games/dwarf-fortress/soundsense.nix b/pkgs/games/dwarf-fortress/soundsense.nix index def3a09a4ba6..67c86f7f745c 100644 --- a/pkgs/games/dwarf-fortress/soundsense.nix +++ b/pkgs/games/dwarf-fortress/soundsense.nix @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { version = "2016-1_196"; - dfVersion = "0.44.05"; + dfVersion = "0.44.09"; inherit soundPack; name = "soundsense-${version}"; src = fetchzip { diff --git a/pkgs/games/dwarf-fortress/themes/cla.nix b/pkgs/games/dwarf-fortress/themes/cla.nix index 7c3eb0b63e3d..c7d85c48ce8e 100644 --- a/pkgs/games/dwarf-fortress/themes/cla.nix +++ b/pkgs/games/dwarf-fortress/themes/cla.nix @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { cp -r data raw $out ''; - passthru.dfVersion = "0.44.05"; + passthru.dfVersion = "0.44.09"; preferLocalBuild = true; diff --git a/pkgs/games/dwarf-fortress/themes/phoebus.nix b/pkgs/games/dwarf-fortress/themes/phoebus.nix index d94902719204..8641e15fa864 100644 --- a/pkgs/games/dwarf-fortress/themes/phoebus.nix +++ b/pkgs/games/dwarf-fortress/themes/phoebus.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { name = "phoebus-theme-${version}"; - version = "44.05"; + version = "44.07"; src = fetchFromGitHub { owner = "DFgraphics"; repo = "Phoebus"; rev = version; - sha256 = "06mhr6dpbvwp9dxn70kyr6dwyql2k6x5zba2zf6awjah7idys0xr"; + sha256 = "114yc0s7j57i4rq6iq295gggbgzx4qb389xip8lkzfg4dnp6klns"; }; installPhase = '' @@ -19,7 +19,7 @@ stdenv.mkDerivation rec { cp -r data raw $out ''; - passthru.dfVersion = "0.44.05"; + passthru.dfVersion = "0.44.09"; preferLocalBuild = true; diff --git a/pkgs/games/dwarf-fortress/unfuck.nix b/pkgs/games/dwarf-fortress/unfuck.nix index 89e98f4b4518..fc42c05f0701 100644 --- a/pkgs/games/dwarf-fortress/unfuck.nix +++ b/pkgs/games/dwarf-fortress/unfuck.nix @@ -3,7 +3,7 @@ , ncurses, glib, gtk2, libsndfile, zlib }: -let dfVersion = "0.44.05"; in +let dfVersion = "0.44.09"; in stdenv.mkDerivation { name = "dwarf_fortress_unfuck-${dfVersion}"; diff --git a/pkgs/games/gnushogi/default.nix b/pkgs/games/gnushogi/default.nix new file mode 100644 index 000000000000..e85674550308 --- /dev/null +++ b/pkgs/games/gnushogi/default.nix @@ -0,0 +1,20 @@ +{ stdenv, fetchurl, zlib }: + +stdenv.mkDerivation rec { + name = "gnushogi-${version}"; + version = "1.4.2"; + buildInputs = [ zlib ]; + + src = fetchurl { + url = "mirror://gnu/gnushogi/${name}.tar.gz"; + sha256 = "0a9bsl2nbnb138lq0h14jfc5xvz7hpb2bcsj4mjn6g1hcsl4ik0y"; + }; + + meta = with stdenv.lib; { + description = "GNU implementation of Shogi, also known as Japanese Chess"; + homepage = https://www.gnu.org/software/gnushogi/; + license = licenses.gpl3; + maintainers = [ maintainers.ciil ]; + platforms = platforms.unix; + }; +} diff --git a/pkgs/games/gzdoom/default.nix b/pkgs/games/gzdoom/default.nix index d622299cf0f3..3964eefb9b33 100644 --- a/pkgs/games/gzdoom/default.nix +++ b/pkgs/games/gzdoom/default.nix @@ -4,13 +4,13 @@ stdenv.mkDerivation rec { name = "gzdoom-${version}"; - version = "3.3.0"; + version = "3.3.2"; src = fetchFromGitHub { owner = "coelckers"; repo = "gzdoom"; rev = "g${version}"; - sha256 = "1q1hjfxhksny236a058ys36mpdl434vbmgapqr51n82pia838h2l"; + sha256 = "0zlkja0jcqi3s4iw5h076iwqxa3haradqksjnx9jxcbkvaw75p3k"; }; nativeBuildInputs = [ cmake makeWrapper ]; diff --git a/pkgs/games/openarena/default.nix b/pkgs/games/openarena/default.nix index 1e396318bbbd..22ce05cb38a7 100644 --- a/pkgs/games/openarena/default.nix +++ b/pkgs/games/openarena/default.nix @@ -1,4 +1,4 @@ -{ fetchurl, makeWrapper, patchelf, pkgs, stdenv, SDL, libogg, libvorbis }: +{ fetchurl, makeWrapper, patchelf, pkgs, stdenv, SDL, libogg, libvorbis, curl }: stdenv.mkDerivation rec { name = "openarena-${version}"; @@ -15,7 +15,7 @@ stdenv.mkDerivation rec { installPhase = let gameDir = "$out/openarena-$version"; interpreter = "$(< \"$NIX_CC/nix-support/dynamic-linker\")"; - libPath = stdenv.lib.makeLibraryPath [ SDL libogg libvorbis ]; + libPath = stdenv.lib.makeLibraryPath [ SDL libogg libvorbis curl ]; in '' mkdir -pv $out/bin cd $out diff --git a/pkgs/games/openclonk/default.nix b/pkgs/games/openclonk/default.nix index d3fb8c7bc58e..e4bcef29878c 100644 --- a/pkgs/games/openclonk/default.nix +++ b/pkgs/games/openclonk/default.nix @@ -1,7 +1,7 @@ -{ stdenv, fetchurl, cmake, gnome3, pcre, freetype, glew, gtk3, libjpeg, libpng, - SDL, SDL_mixer, libupnp, xorg, pkgconfig, gtest, tinyxml, gmock, readline, - libxkbcommon, epoxy, at-spi2-core, dbus, libxml2, - enableSoundtrack ? false # Enable the "Open Clonk Soundtrack - Explorers Journey" by David Oerther +{ stdenv, fetchurl, cmake, pkgconfig +, SDL2, libvorbis, libogg, libjpeg, libpng, freetype, glew, tinyxml, openal +, freealut, readline, gcc-unwrapped +, enableSoundtrack ? false # Enable the "Open Clonk Soundtrack - Explorers Journey" by David Oerther }: let @@ -10,32 +10,38 @@ let sha256 = "1ckj0dlpp5zsnkbb5qxxfxpkiq76jj2fgj91fyf3ll7n0gbwcgw5"; }; in stdenv.mkDerivation rec { - version = "7.0"; + version = "8.1"; name = "openclonk-${version}"; src = fetchurl { - url = "http://www.openclonk.org/builds/release/7.0/openclonk-${version}-src.tar.bz2"; - sha256 = "0ch71dqaaalg744pc1gvg6sj2yp2kgvy2m4yh6l7ljkpf8fj66mw"; + url = "http://www.openclonk.org/builds/release/8.1/openclonk-${version}-src.tar.bz2"; + sha256 = "0imkqjp8lww5p0cnqf4k4mb2v682mnsas63qmiz17rspakr7fxik"; }; postInstall = '' mv -v $out/games/openclonk $out/bin/ '' + stdenv.lib.optionalString enableSoundtrack '' - cp -v ${soundtrack_src} $out/share/games/openclonk/Music.ocg + ln -sv ${soundtrack_src} $out/share/games/openclonk/Music.ocg ''; enableParallelBuilding = true; + nativeBuildInputs = [ cmake pkgconfig ]; + buildInputs = [ - cmake gnome3.gtksourceview pcre freetype glew gtk3 libjpeg libpng SDL - SDL_mixer libupnp tinyxml xorg.libpthreadstubs libxkbcommon xorg.libXdmcp - pkgconfig gtest gmock readline epoxy at-spi2-core dbus libxml2 + SDL2 libvorbis libogg libjpeg libpng freetype glew tinyxml openal freealut + readline ]; + cmakeFlags = [ "-DCMAKE_AR=${gcc-unwrapped}/bin/gcc-ar" "-DCMAKE_RANLIB=${gcc-unwrapped}/bin/gcc-ranlib" ]; + + cmakeBuildType = "RelWithDebInfo"; + meta = with stdenv.lib; { description = "Free multiplayer action game in which you control clonks, small but witty and nimble humanoid beings"; - homepage = http://openclonk.org; + homepage = https://www.openclonk.org; license = if enableSoundtrack then licenses.unfreeRedistributable else licenses.isc; - platforms = platforms.all; + maintainers = with maintainers; [ lheckemann ]; + platforms = [ "x86_64-linux" "i686-linux" ]; }; } diff --git a/pkgs/games/quake2/yquake2/default.nix b/pkgs/games/quake2/yquake2/default.nix new file mode 100644 index 000000000000..bee7d7703ab5 --- /dev/null +++ b/pkgs/games/quake2/yquake2/default.nix @@ -0,0 +1,93 @@ +{ stdenv, lib, fetchFromGitHub, buildEnv, cmake, makeWrapper +, SDL2, libGL +, oggSupport ? true, libogg, libvorbis +, openalSupport ? true, openal +, zipSupport ? true, zlib +}: + +let + mkFlag = b: if b then "ON" else "OFF"; + + games = import ./games.nix { inherit stdenv lib fetchFromGitHub cmake; }; + + wrapper = import ./wrapper.nix { inherit stdenv lib buildEnv makeWrapper yquake2; }; + + yquake2 = stdenv.mkDerivation rec { + name = "yquake2-${version}"; + version = "7.20"; + + src = fetchFromGitHub { + owner = "yquake2"; + repo = "yquake2"; + rev = "QUAKE2_${builtins.replaceStrings ["."] ["_"] version}"; + sha256 = "1yrmn8vajab3zd0fni029s6wrvv2ljn1kyhaiw02wm1dc5yyzb2g"; + }; + + enableParallelBuilding = true; + + nativeBuildInputs = [ cmake ]; + + buildInputs = [ SDL2 libGL ] + ++ lib.optionals oggSupport [ libogg libvorbis ] + ++ lib.optional openalSupport openal + ++ lib.optional zipSupport zlib; + + cmakeFlags = [ + "-DCMAKE_BUILD_TYPE=Release" + "-DOGG_SUPPORT=${mkFlag oggSupport}" + "-DOPENAL_SUPPORT=${mkFlag openalSupport}" + "-DZIP_SUPPORT=${mkFlag zipSupport}" + "-DSYSTEMWIDE_SUPPORT=ON" + ]; + + preConfigure = '' + # Since we can't expand $out in `cmakeFlags` + cmakeFlags="$cmakeFlags -DSYSTEMDIR=$out/share/games/quake2" + ''; + + installPhase = '' + # Yamagi Quake II expects all binaries (executables and libs) to be in the + # same directory. + mkdir -p $out/bin $out/lib/yquake2 $out/share/games/quake2 + cp -r release/* $out/lib/yquake2 + ln -s $out/lib/yquake2/quake2 $out/bin/yquake2 + ln -s $out/lib/yquake2/q2ded $out/bin/yq2ded + cp $src/stuff/yq2.cfg $out/share/games/quake2 + ''; + + meta = with stdenv.lib; { + description = "Yamagi Quake II client"; + homepage = "https://www.yamagi.org/quake2/"; + license = licenses.gpl2; + platforms = platforms.unix; + maintainers = with maintainers; [ tadfisher ]; + }; + }; + +in rec { + inherit yquake2; + + yquake2-ctf = wrapper { + games = [ games.ctf ]; + name = "yquake2-ctf"; + inherit (games.ctf) description; + }; + + yquake2-ground-zero = wrapper { + games = [ games.ground-zero ]; + name = "yquake2-ground-zero"; + inherit (games.ground-zero) description; + }; + + yquake2-the-reckoning = wrapper { + games = [ games.the-reckoning ]; + name = "yquake2-the-reckoning"; + inherit (games.the-reckoning) description; + }; + + yquake2-all-games = wrapper { + games = lib.attrValues games; + name = "yquake2-all-games"; + description = "Yamagi Quake II with all add-on games"; + }; +} diff --git a/pkgs/games/quake2/yquake2/games.nix b/pkgs/games/quake2/yquake2/games.nix new file mode 100644 index 000000000000..059fb26eb9b8 --- /dev/null +++ b/pkgs/games/quake2/yquake2/games.nix @@ -0,0 +1,59 @@ +{ stdenv, lib, fetchFromGitHub, cmake }: + +let + games = { + ctf = { + id = "ctf"; + version = "1.05"; + description = "'Capture The Flag' for Yamagi Quake II"; + sha256 = "15ihspyshls645ig0gq6bwdzvghyyysqk60g6ad3n4idb2ms52md"; + }; + + ground-zero = { + id = "rogue"; + version = "2.04"; + description = "'Ground Zero' for Yamagi Quake II"; + sha256 = "0x1maaycrxv7d3xvvk1ih2zymhvcd3jnab7g3by8qh6g5y33is5l"; + }; + + the-reckoning = { + id = "xatrix"; + version = "2.05"; + description = "'The Reckoning' for Yamagi Quake II"; + sha256 = "0gf2ryhgz8nw1mb1arlbriihjsx09fa0wmkgcayc8ijignfi1qkh"; + }; + }; + + toDrv = title: data: stdenv.mkDerivation rec { + inherit (data) id version description sha256; + inherit title; + + name = "yquake2-${title}-${version}"; + + src = fetchFromGitHub { + inherit sha256; + owner = "yquake2"; + repo = data.id; + rev = "${lib.toUpper id}_${builtins.replaceStrings ["."] ["_"] version}"; + }; + + enableParallelBuilding = true; + + nativeBuildInputs = [ cmake ]; + + installPhase = '' + mkdir -p $out/lib/yquake2/${id} + cp Release/* $out/lib/yquake2/${id} + ''; + + meta = with stdenv.lib; { + inherit (data) description; + homepage = "https://www.yamagi.org/quake2/"; + license = licenses.unfree; + platforms = platforms.unix; + maintainers = with maintainers; [ tadfisher ]; + }; + }; + +in + lib.mapAttrs toDrv games diff --git a/pkgs/games/quake2/yquake2/wrapper.nix b/pkgs/games/quake2/yquake2/wrapper.nix new file mode 100644 index 000000000000..8cd1044456ac --- /dev/null +++ b/pkgs/games/quake2/yquake2/wrapper.nix @@ -0,0 +1,31 @@ +{ stdenv, lib, buildEnv, makeWrapper, yquake2 }: + +{ games +, name +, description +}: + +let + env = buildEnv { + name = "${name}-env"; + paths = [ yquake2 ] ++ games; + }; + +in stdenv.mkDerivation { + inherit name; + + nativeBuildInputs = [ makeWrapper ]; + + buildCommand = '' + mkdir -p $out/bin + '' + lib.concatMapStringsSep "\n" (game: '' + makeWrapper ${env}/bin/yquake2 $out/bin/yquake2-${game.title} \ + --add-flags "+set game ${game.id}" + makeWrapper ${env}/bin/yq2ded $out/bin/yq2ded-${game.title} \ + --add-flags "+set game ${game.id}" + '') games; + + meta = { + inherit description; + }; +} diff --git a/pkgs/games/quakespasm/default.nix b/pkgs/games/quakespasm/default.nix index be480009b8a6..45c3deef172f 100644 --- a/pkgs/games/quakespasm/default.nix +++ b/pkgs/games/quakespasm/default.nix @@ -10,30 +10,32 @@ stdenv.mkDerivation rec { }; sourceRoot = "${name}/Quake"; - + buildInputs = [ gzip SDL libvorbis libmad ]; + buildFlags = [ "DO_USERDIRS=1" ]; + preInstall = '' mkdir -p "$out/bin" substituteInPlace Makefile --replace "/usr/local/games" "$out/bin" ''; enableParallelBuilding = true; - + meta = { description = "An engine for iD software's Quake"; homepage = http://quakespasm.sourceforge.net/; longDescription = '' QuakeSpasm is a modern, cross-platform Quake 1 engine based on FitzQuake. - It includes support for 64 bit CPUs and custom music playback, a new sound driver, + It includes support for 64 bit CPUs and custom music playback, a new sound driver, some graphical niceities, and numerous bug-fixes and other improvements. - Quakespasm utilizes either the SDL or SDL2 frameworks, so choose which one - works best for you. SDL is probably less buggy, but SDL2 has nicer features + Quakespasm utilizes either the SDL or SDL2 frameworks, so choose which one + works best for you. SDL is probably less buggy, but SDL2 has nicer features and smoother mouse input - though no CD support. ''; - + platforms = stdenv.lib.platforms.linux; maintainers = [ stdenv.lib.maintainers.m3tti ]; }; diff --git a/pkgs/games/quakespasm/vulkan.nix b/pkgs/games/quakespasm/vulkan.nix index 675c2ab4b4d8..d53977448f63 100644 --- a/pkgs/games/quakespasm/vulkan.nix +++ b/pkgs/games/quakespasm/vulkan.nix @@ -12,11 +12,13 @@ stdenv.mkDerivation rec { }; sourceRoot = "source/Quake"; - + buildInputs = [ makeWrapper gzip SDL2 libvorbis libmad vulkan-loader.dev ]; + buildFlags = [ "DO_USERDIRS=1" ]; + preInstall = '' mkdir -p "$out/bin" ''; @@ -28,7 +30,7 @@ stdenv.mkDerivation rec { ''; enableParallelBuilding = true; - + meta = { description = "Vulkan Quake port based on QuakeSpasm"; homepage = src.meta.homepage; @@ -40,7 +42,7 @@ stdenv.mkDerivation rec { passes & sub passes, pipeline barriers & synchronization, compute shaders, push & specialization constants, CPU/GPU parallelism and memory pooling. ''; - + platforms = stdenv.lib.platforms.linux; maintainers = [ stdenv.lib.maintainers.gnidorah ]; }; diff --git a/pkgs/games/sgt-puzzles/default.nix b/pkgs/games/sgt-puzzles/default.nix index a9f2aae443fc..30e2bcfdf524 100644 --- a/pkgs/games/sgt-puzzles/default.nix +++ b/pkgs/games/sgt-puzzles/default.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "sgt-puzzles-r${version}"; - version = "20171029.69773d8"; + version = "20180409.d95f476"; src = fetchurl { url = "http://www.chiark.greenend.org.uk/~sgtatham/puzzles/puzzles-${version}.tar.gz"; - sha256 = "0m1gaa802jyih9hcwpvb05zrzprgj6akafgvbsnq321s0sqzaxf0"; + sha256 = "1psml0abh3i577dns440h52568ggdny2wk1hhr30815nxibbribx"; }; nativeBuildInputs = [ autoreconfHook makeWrapper pkgconfig perl wrapGAppsHook ]; diff --git a/pkgs/games/wesnoth/dev.nix b/pkgs/games/wesnoth/dev.nix index 9fd2dc97d980..c9cd7119d8f2 100644 --- a/pkgs/games/wesnoth/dev.nix +++ b/pkgs/games/wesnoth/dev.nix @@ -1,23 +1,23 @@ { stdenv, fetchurl, cmake, pkgconfig, SDL2, SDL2_image, SDL2_mixer, SDL2_net, SDL2_ttf -, pango, gettext, boost, freetype, libvorbis, fribidi, dbus, libpng, pcre, openssl +, pango, gettext, boost, freetype, libvorbis, fribidi, dbus, libpng, pcre, openssl, icu , enableTools ? false }: stdenv.mkDerivation rec { pname = "wesnoth"; - version = "1.13.11"; + version = "1.13.13"; name = "${pname}-${version}"; src = fetchurl { url = "mirror://sourceforge/sourceforge/${pname}/${name}.tar.bz2"; - sha256 = "168732lmdnskca9hrkmaz4mi0bssc5ppklln10s306cbsl93bd39"; + sha256 = "1jn3gvw0x8ndwvdm4bqpki1p1cxg2ij02s6w0frhfi4kz706al0c"; }; nativeBuildInputs = [ cmake pkgconfig ]; buildInputs = [ SDL2 SDL2_image SDL2_mixer SDL2_net SDL2_ttf pango gettext boost - libvorbis fribidi dbus libpng pcre openssl ]; + libvorbis fribidi dbus libpng pcre openssl icu ]; cmakeFlags = [ "-DENABLE_TOOLS=${if enableTools then "ON" else "OFF"}" ]; diff --git a/pkgs/games/xskat/default.nix b/pkgs/games/xskat/default.nix index bd41531d9236..383bdb882844 100644 --- a/pkgs/games/xskat/default.nix +++ b/pkgs/games/xskat/default.nix @@ -30,7 +30,7 @@ stdenv.mkDerivation { meta = { inherit (s) version; description = ''Famous german card game''; - platforms = stdenv.lib.platforms.linux; + platforms = stdenv.lib.platforms.unix; license = stdenv.lib.licenses.free; longDescription = ''Play the german card game Skat against the AI or over IRC.''; homepage = http://www.xskat.de/; diff --git a/pkgs/games/xsok/default.nix b/pkgs/games/xsok/default.nix index e683e96d206d..0aa0c97f07d2 100644 --- a/pkgs/games/xsok/default.nix +++ b/pkgs/games/xsok/default.nix @@ -27,6 +27,7 @@ stdenv.mkDerivation rec { sed -e '/chown /d' -i src/Imakefile sed -e '/chmod /d' -i src/Imakefile sed -e '/InstallAppDefaults/d' -i src/Imakefile + sed -e 's/CC = gcc/CC = cc/g' -i src/Imakefile ''; makeFlags = ["BINDIR=$(out)/bin"]; @@ -41,7 +42,7 @@ stdenv.mkDerivation rec { description = "A generic Sokoban game for X11"; license = stdenv.lib.licenses.gpl2Plus; maintainers = [stdenv.lib.maintainers.raskin]; - platforms = stdenv.lib.platforms.linux; + platforms = stdenv.lib.platforms.unix; homepage = https://tracker.debian.org/pkg/xsok; }; } diff --git a/pkgs/misc/cups/filters.nix b/pkgs/misc/cups/filters.nix index 287451d338da..02a7ce219c4b 100644 --- a/pkgs/misc/cups/filters.nix +++ b/pkgs/misc/cups/filters.nix @@ -9,11 +9,11 @@ let in stdenv.mkDerivation rec { name = "cups-filters-${version}"; - version = "1.20.2"; + version = "1.20.3"; src = fetchurl { url = "http://openprinting.org/download/cups-filters/${name}.tar.xz"; - sha256 = "1f6dw476m9gc94jy38f79a5aa40mk91yc81cdwrsz42wlz3nbdq2"; + sha256 = "1g18qkvl9zdxickiblgs2vvkip4b6p2jalw4d30zzz3hh8f1g6iv"; }; nativeBuildInputs = [ pkgconfig makeWrapper ]; diff --git a/pkgs/misc/drivers/gutenprint/default.nix b/pkgs/misc/drivers/gutenprint/default.nix index 3a46414512cf..7c8750905d9c 100644 --- a/pkgs/misc/drivers/gutenprint/default.nix +++ b/pkgs/misc/drivers/gutenprint/default.nix @@ -6,11 +6,11 @@ }: stdenv.mkDerivation rec { - name = "gutenprint-5.2.13"; + name = "gutenprint-5.2.14"; src = fetchurl { url = "mirror://sourceforge/gimp-print/${name}.tar.bz2"; - sha256 = "0hi7s0y59306p4kp06sankfa57k2805khbknkvl9d036hdfp9afr"; + sha256 = "1293x19gw1b742id7c7bz5giv3vlxaqpmbdz2g0n99wny5k0ggs5"; }; nativeBuildInputs = [ makeWrapper pkgconfig ]; diff --git a/pkgs/misc/drivers/sc-controller/default.nix b/pkgs/misc/drivers/sc-controller/default.nix index 93e8ffbc3ca8..d4ed749ca9cc 100644 --- a/pkgs/misc/drivers/sc-controller/default.nix +++ b/pkgs/misc/drivers/sc-controller/default.nix @@ -7,13 +7,13 @@ buildPythonApplication rec { pname = "sc-controller"; - version = "0.4.1"; + version = "0.4.2"; src = fetchFromGitHub { owner = "kozec"; repo = pname; rev = "v${version}"; - sha256 = "0zal8sl3j17gqmynig8jhqrhj7zfqql8vci4whn19gymchwjalzi"; + sha256 = "19i9z5cjjgi3a94hrz5g3a6m4vj71p1gs6mhklc6dq8ydwsadwzz"; }; nativeBuildInputs = [ wrapGAppsHook ]; diff --git a/pkgs/misc/emulators/fs-uae/default.nix b/pkgs/misc/emulators/fs-uae/default.nix index 27abe5fd470d..6d462c0e3797 100644 --- a/pkgs/misc/emulators/fs-uae/default.nix +++ b/pkgs/misc/emulators/fs-uae/default.nix @@ -5,11 +5,11 @@ with stdenv.lib; stdenv.mkDerivation rec { name = "fs-uae-${version}"; - version = "2.8.3"; + version = "2.8.4"; src = fetchurl { url = "https://fs-uae.net/fs-uae/stable/${version}/${name}.tar.gz"; - sha256 = "14k2p324sdr662f49299mv0bw5jmpj1i2iqn0xs5pgf80x6l3mg2"; + sha256 = "19ccb3gbpjwwazqc9pyin3jicjl27m2gyvy5bb5zysq0mxpzassj"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/misc/emulators/retroarch/cores.nix b/pkgs/misc/emulators/retroarch/cores.nix index 8a3f7796aef4..d6b3b6a98706 100644 --- a/pkgs/misc/emulators/retroarch/cores.nix +++ b/pkgs/misc/emulators/retroarch/cores.nix @@ -232,11 +232,10 @@ in with stdenv.lib.licenses; mame = (mkLibRetroCore { core = "mame"; - version = "2018-03-02"; src = fetchRetro { repo = "mame"; - rev = "893f1ac2231b348b63209fd5b2545f770458ae8f"; - sha256 = "1j9p82q9jhf5lf4w392zd09bq0j4iw1afhznymg0v60jv592h3gz"; + rev = "9f8a36adeb4dc54ec2ecac992ce91bcdb377519e"; + sha256 = "0blfvq28hgv9kkpijd8c9d9sa5g2qr448clwi7wrj8kqfdnrr8m1"; }; description = "Port of MAME to libretro"; license = gpl2Plus; diff --git a/pkgs/misc/emulators/wine/sources.nix b/pkgs/misc/emulators/wine/sources.nix index 663da1eb1141..f86e34a5d542 100644 --- a/pkgs/misc/emulators/wine/sources.nix +++ b/pkgs/misc/emulators/wine/sources.nix @@ -62,5 +62,4 @@ in rec { repo = "winetricks"; rev = version; }; - } diff --git a/pkgs/misc/jackaudio/jack1.nix b/pkgs/misc/jackaudio/jack1.nix index 43d23dd525ae..848215ae17af 100644 --- a/pkgs/misc/jackaudio/jack1.nix +++ b/pkgs/misc/jackaudio/jack1.nix @@ -15,11 +15,11 @@ let in stdenv.mkDerivation rec { name = "jack1-${version}"; - version = "0.124.1"; + version = "0.125.0"; src = fetchurl { url = "http://jackaudio.org/downloads/jack-audio-connection-kit-${version}.tar.gz"; - sha256 = "1mk1wnx33anp6haxfjjkfhwbaknfblsvj35nxvz0hvspcmhdyhpb"; + sha256 = "0i6l25dmfk2ji2lrakqq9icnwjxklgcjzzk65dmsff91z2zva5rm"; }; configureFlags = '' diff --git a/pkgs/misc/logging/beats/5.x.nix b/pkgs/misc/logging/beats/5.x.nix index ba2a8b2448ef..94d5449100db 100644 --- a/pkgs/misc/logging/beats/5.x.nix +++ b/pkgs/misc/logging/beats/5.x.nix @@ -8,7 +8,7 @@ let beat = package : extraArgs : buildGoPackage (rec { owner = "elastic"; repo = "beats"; rev = "v${version}"; - sha256 = "0ri2l8pyl1fnx0zypliwprkk1wkaxz8ywkgz8h2f08v7h1zgq1m6"; + sha256 = "00g90i58c6gnyzszsx7y75vn1350hrkzrsb50xx700jqg9ii8yin"; }; goPackagePath = "github.com/elastic/beats"; diff --git a/pkgs/misc/logging/beats/6.x.nix b/pkgs/misc/logging/beats/6.x.nix index 2883604491c6..ce911ae40d5e 100644 --- a/pkgs/misc/logging/beats/6.x.nix +++ b/pkgs/misc/logging/beats/6.x.nix @@ -8,7 +8,7 @@ let beat = package : extraArgs : buildGoPackage (rec { owner = "elastic"; repo = "beats"; rev = "v${version}"; - sha256 = "05ay6hdc1jgi6b00bd998zc39ca8jhnk7i6m3mw70s0baqv1scik"; + sha256 = "194z3j9zwlbc6j97iy1m1cl0xqks3ws2bjp2xrgy8cwpi7fclaw2"; }; goPackagePath = "github.com/elastic/beats"; diff --git a/pkgs/misc/screensavers/i3lock-pixeled/default.nix b/pkgs/misc/screensavers/i3lock-pixeled/default.nix index 7cb3e68dec86..5fff7b8f0ea3 100644 --- a/pkgs/misc/screensavers/i3lock-pixeled/default.nix +++ b/pkgs/misc/screensavers/i3lock-pixeled/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "i3lock-pixeled-${version}"; - version = "1.1.0"; + version = "1.2.0"; src = fetchurl { url = "https://github.com/Ma27/i3lock-pixeled/archive/${version}.tar.gz"; - sha256 = "046qbx4qvcc66h53h4mm9pyjj9gjc6dzy38a0f0jc5a84xbivh7k"; + sha256 = "0vlynm833fk1mmdnkcgh4hwqmfypn22zskhysm110k39zvikif0h"; }; propagatedBuildInputs = with pkgs; [ diff --git a/pkgs/misc/screensavers/xscreensaver/default.nix b/pkgs/misc/screensavers/xscreensaver/default.nix index 8035e7da37db..d93d982924d1 100644 --- a/pkgs/misc/screensavers/xscreensaver/default.nix +++ b/pkgs/misc/screensavers/xscreensaver/default.nix @@ -5,12 +5,12 @@ }: stdenv.mkDerivation rec { - version = "5.38"; + version = "5.39"; name = "xscreensaver-${version}"; src = fetchurl { url = "https://www.jwz.org/xscreensaver/${name}.tar.gz"; - sha256 = "1f58h5rgjbxr4hh40m6zkpkzbzg68l7nqzjwal0b17yysafbmsf6"; + sha256 = "09i47h4hdgwxyqgrsnshl4l5dv5mrsp37h705cc22lwby601ikj8"; }; buildInputs = diff --git a/pkgs/misc/themes/adapta/default.nix b/pkgs/misc/themes/adapta/default.nix index c62250b1124c..c0c67eeb6abe 100644 --- a/pkgs/misc/themes/adapta/default.nix +++ b/pkgs/misc/themes/adapta/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "adapta-gtk-theme-${version}"; - version = "3.93.0.225"; + version = "3.93.0.258"; src = fetchFromGitHub { owner = "adapta-project"; repo = "adapta-gtk-theme"; rev = version; - sha256 = "1mjdvfvx45pdypl34yghgi47bj86rwvryx9mwhwwb09psn9smp49"; + sha256 = "114rryaqr97f7qlwxn3fdspzigxx1jgpsbhypdn265511rsh30hx"; }; preferLocalBuild = true; diff --git a/pkgs/misc/tmux-plugins/default.nix b/pkgs/misc/tmux-plugins/default.nix new file mode 100644 index 000000000000..b29565d01ecb --- /dev/null +++ b/pkgs/misc/tmux-plugins/default.nix @@ -0,0 +1,224 @@ +{ fetchgit, stdenv, pkgs }: + +let + rtpPath = "share/tmux-plugins"; + + addRtp = path: pluginName: attrs: derivation: + derivation // { rtp = "${derivation}/${path}/${builtins.replaceStrings ["-"] ["_"] pluginName}.tmux"; } // { + overrideAttrs = f: buildTmuxPlugin (attrs // f attrs); + }; + + buildTmuxPlugin = a@{ + pluginName, + namePrefix ? "tmuxplugin-", + src, + unpackPhase ? "", + configurePhase ? "", + buildPhase ? "", + addonInfo ? null, + preInstall ? "", + postInstall ? "", + path ? (builtins.parseDrvName pluginName).name, + dependencies ? [], + ... + }: + addRtp "${rtpPath}/${path}" pluginName a (stdenv.mkDerivation (a // { + name = namePrefix + pluginName; + + inherit pluginName unpackPhase configurePhase buildPhase addonInfo preInstall postInstall; + + installPhase = '' + runHook preInstall + + target=$out/${rtpPath}/${path} + mkdir -p $out/${rtpPath} + cp -r . $target + if [ -n "$addonInfo" ]; then + echo "$addonInfo" > $target/addon-info.json + fi + + runHook postInstall + ''; + + dependencies = [ pkgs.bash ] ++ dependencies; + })); + + buildTmuxPluginFrom2Nix = a: buildTmuxPlugin ({ + buildPhase = ":"; + configurePhase =":"; + } // a); + +in rec { + + battery = buildTmuxPluginFrom2Nix { + pluginName = "battery"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-battery"; + rev = "09be78c35ee84f858f724442b94ad045ade23eb0"; + sha256 = "0gm6qiay0k5b3yzrabfmh4inyh9r6rfhja2l3r4cixcvc8sgvh8l"; + }; + }; + + continuum = buildTmuxPluginFrom2Nix { + pluginName = "continuum"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-continuum"; + rev = "90f4a00c41de094864dd4e29231253bcd80d4409"; + sha256 = "1hviqz62mnq5h4vgcy9bl5004q18yz5b90bnih0ibsna877x3nbc"; + }; + dependencies = [ resurrect ]; + }; + + copycat = buildTmuxPluginFrom2Nix { + pluginName = "copycat"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-copycat"; + rev = "6f9b9cd2d93872cef60e3ea7f7ae89598569ed25"; + sha256 = "12dgn5wnzrhd6sqa64w875ld3lrrny8xvdq6b6lzxyain9q49mrf"; + }; + }; + + cpu = buildTmuxPluginFrom2Nix { + pluginName = "cpu"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-cpu"; + rev = "12f7a74e25bf59701456e2c0d98b39bb19ec7039"; + sha256 = "0qxn8ngg297980lj6w8ih2m8m8bxxdbcz5hsjmlia92h5rdkm5kl"; + }; + }; + + fpp = buildTmuxPluginFrom2Nix { + pluginName = "fpp"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-fpp"; + rev = "ca125d5a9c80bb156ac114ac3f3d5951a795c80e"; + sha256 = "1b89s6mfzifi7s5iwf22w7niddpq28w48nmqqy00dv38z4yga5ws"; + }; + postInstall = '' + sed -i -e 's|fpp |${pkgs.fpp}/bin/fpp |g' $target/fpp.tmux + ''; + dependencies = [ pkgs.fpp ]; + }; + + logging = buildTmuxPluginFrom2Nix { + pluginName = "logging"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-logging"; + rev = "b2706119cd587230beae02980d3d7fa2d5afebe9"; + sha256 = "1w1ymscfbz87lypaxgjdva1rg7jw2jyf7nnfgyngghw9m1l2xk2c"; + }; + }; + + net-speed = buildTmuxPluginFrom2Nix { + pluginName = "net-speed"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-net-speed"; + rev = "536d2bdd053a3bdfcc5cf7680c0dba76127c95ca"; + sha256 = "1bly5f40dgiym378jkfwm7qag9xl6qvziqiqnj65yblqd5py325z"; + }; + }; + + maildir-counter = buildTmuxPluginFrom2Nix { + pluginName = "maildir-counter"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-maildir-counter"; + rev = "9415f0207e71e37cbd870c9443426dbea6da78b9"; + sha256 = "0dwvqhiv9bjwr01hsi5c57n55jyv5ha5m5q1aqgglf4wyhbnfms4"; + }; + }; + + online-status = buildTmuxPluginFrom2Nix { + pluginName = "online-status"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-online-status"; + rev = "ea86704ced8a20f4a431116aa43f57edcf5a6312"; + sha256 = "1hy3vg8v2sir865ylpm2r4ip1zgd4wlrf24jbwh16m23qdcvc19r"; + }; + }; + + open = buildTmuxPluginFrom2Nix { + pluginName = "open"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-open"; + rev = "f99d3189c445188eae5fa9bfeabc95df16deca92"; + sha256 = "13q3zd5jv7akkjjwhgimmfylrvalxdn54fnpfb14g6xam6h8808m"; + }; + }; + + pain-control = buildTmuxPluginFrom2Nix { + pluginName = "pain-control"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-pain-control"; + rev = "731667692da46d51a6a9dffb4c43384a5d68ff28"; + sha256 = "1ihpl5wgjmhfgcrasgnydd7vpsar865sx2whra19gpfm4bglmdzl"; + }; + }; + + prefix-highlight = buildTmuxPluginFrom2Nix { + pluginName = "prefix-highlight"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-prefix-highlight"; + rev = "34f7125ae46e5123bedad03e08027332d1186186"; + sha256 = "16z8sm8pifg1m9lmv0z50fb0ws9mk5zqs7a1ddl2bfwkqi7yc0c0"; + }; + }; + + resurrect = buildTmuxPluginFrom2Nix { + pluginName = "resurrect"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-resurrect"; + rev = "7c77c70483b818d331e46c4cf64c716ded09a152"; + sha256 = "08gjxwdmfy16xpgi87rp9dj5338imqsy392pixf7xcnr05413ap1"; + }; + }; + + sensible = buildTmuxPluginFrom2Nix { + pluginName = "sensible"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-sensible"; + rev = "e91b178ff832b7bcbbf4d99d9f467f63fd1b76b5"; + sha256 = "1z8dfbwblrbmb8sgb0k8h1q0dvfdz7gw57las8nwd5gj6ss1jyvx"; + }; + }; + + sessionist = buildTmuxPluginFrom2Nix { + pluginName = "sessionist"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-sessionist"; + rev = "09ec86be38eae98ffc27bd0dde605ed10ae0dc89"; + sha256 = "030q2mmj8akbc26jnqn8n7fckg1025p0ildx4wr401b6p1snnlw4"; + }; + }; + + sidebar = buildTmuxPluginFrom2Nix { + pluginName = "sidebar"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-sidebar"; + rev = "23014524cab53f8d36373983500fe05a527a444d"; + sha256 = "1w363587isdip1r81h0vkp5163lpa83lvasg8l04h43sbip2y6i8"; + }; + }; + + urlview = buildTmuxPluginFrom2Nix { + pluginName = "urlview"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-urlview"; + rev = "b84c876cffdd22990b4ab51247e795cbd7813d53"; + sha256 = "1jp4jq57cn116b3i34v6yy69izd8s6mp2ijr260cw86g0470k0fn"; + }; + postInstall = '' + sed -i -e '14,20{s|urlview|${pkgs.urlview}/bin/urlview|g}' $target/urlview.tmux + ''; + dependencies = [ pkgs.urlview ]; + }; + + yank = buildTmuxPluginFrom2Nix { + pluginName = "yank"; + src = fetchgit { + url = "https://github.com/tmux-plugins/tmux-yank"; + rev = "feb9611b7d1c323ca54cd8a5111a53e3e8265b59"; + sha256 = "1ywbm09jfh6cm2m6gracmdc3pp5p2dwraalbhfaafqaydjr22qc3"; + }; + }; + +} diff --git a/pkgs/misc/vim-plugins/default.nix b/pkgs/misc/vim-plugins/default.nix index 3e8c6e9b257e..0134d5fae48a 100644 --- a/pkgs/misc/vim-plugins/default.nix +++ b/pkgs/misc/vim-plugins/default.nix @@ -20,7 +20,7 @@ in # TL;DR # Add your plugin to ./vim-plugin-names -# Regenerate via `nix-shell -I nixpkgs=/path/to/your/local/fork -p vimPlugins.pluginnames2nix --command "vim-plugin-names-to-nix </dev/null"` +# Regenerate via `nix-shell -I nixpkgs=/path/to/your/local/fork -p vimPlugins.pluginnames2nix --command "vim-plugin-names-to-nix +'w result' +qall"` # Copy the generated expression(s) into this file. # If plugin is complicated then make changes to ./vim2nix/additional-nix-code @@ -54,6 +54,7 @@ rec { # aliasess airline = vim-airline; alternative = a-vim; # backwards compat, added 2014-10-21 + bats = bats-vim; calendar = calendar-vim; coffee-script = vim-coffee-script; coffeeScript = coffee-script; # backwards compat, added 2014-10-18 @@ -207,6 +208,7 @@ rec { }; # --- generated packages bellow this line --- + vim-auto-save = buildVimPluginFrom2Nix { # created by nix#NixDerivation name = "vim-auto-save-2017-11-08"; src = fetchgit { @@ -255,6 +257,17 @@ rec { ''; }; + julia-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation + name = "julia-vim-2018-03-27"; + src = fetchgit { + url = "https://github.com/JuliaEditorSupport/julia-vim"; + rev = "4593c8b1ffe20022677e524487c8554d96cf8f84"; + sha256 = "0yrdzkxyg6cg2i4bd6bqbq0w63hssh3nd0f0qnfl7v5pkq9yba4w"; + }; + dependencies = []; + + }; + zeavim-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation name = "zeavim-vim-2018-03-22"; src = fetchgit { @@ -267,11 +280,11 @@ rec { }; vim-nix = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-nix-2018-03-27"; + name = "vim-nix-2018-04-24"; src = fetchgit { url = "https://github.com/LnL7/vim-nix"; - rev = "397df60e143e26418ed08a9a984013d62442cad6"; - sha256 = "0s0sclf01m4jjql8r10s9277yrpwkn18zn2dk62nz3dvhcvd26ai"; + rev = "dae3d30a145f1d0e50658dafd88f95cd4b5e323d"; + sha256 = "1x3gaiz2wbqykzhk0zj0krjp81m5rxhk80pcg96f4gyqp7hxrx78"; }; dependencies = []; @@ -530,22 +543,22 @@ rec { }; deoplete-nvim = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "deoplete-nvim-2018-04-07"; + name = "deoplete-nvim-2018-04-16"; src = fetchgit { url = "https://github.com/Shougo/deoplete.nvim"; - rev = "34ca8838dfd9600b0a777ecaafafb1e61c8f385b"; - sha256 = "0zca5sm05lix94jmwl88i89d7w7sbd5bz01vfaqq42g2w6yqz4x4"; + rev = "0d48792663437d81bdfa195c676d5c37ef10c89a"; + sha256 = "1zqrxxi7ci1mp5ml7nayj3crzpqgdl09q20wilp68kf2mvll28xi"; }; dependencies = []; }; ultisnips = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "ultisnips-2018-04-08"; + name = "ultisnips-2018-04-16"; src = fetchgit { url = "https://github.com/SirVer/ultisnips"; - rev = "1e35bb3802f4b381b3ec067148f4868bf7536492"; - sha256 = "1qxzvpz7dp8786wfzrm837gy27ig1s8w6i1va29arns16wnhil3f"; + rev = "905e5249246169b6db2bb060e0a2b06eac1890e6"; + sha256 = "025b2f4gs04qb6wnxa0yclwm5jysdj6q10i2zkbiclvblfbxxv19"; }; dependencies = []; @@ -563,11 +576,11 @@ rec { }; vim-gitgutter = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-gitgutter-2018-03-26"; + name = "vim-gitgutter-2018-04-11"; src = fetchgit { url = "https://github.com/airblade/vim-gitgutter"; - rev = "3724e1c207c980b5de914b4857e8b44dc3551506"; - sha256 = "0p9jnsvm59cddcklx5rv5x87pifhxphdcc892ip4vj7pb3mlppmh"; + rev = "5481318fc1b97e7c04eab5496ec45c63335d6bc1"; + sha256 = "1jwqxkaqvkmdqi9k9nx25xz28av374a70izs0534hx12crgg8g3w"; }; dependencies = []; @@ -684,11 +697,11 @@ rec { }; clighter8 = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "clighter8-2018-03-17"; + name = "clighter8-2018-04-15"; src = fetchgit { url = "https://github.com/bbchung/clighter8"; - rev = "4313362e34fd3ba8fe224879cf6b7d19220e21f3"; - sha256 = "1h7qpa8i1phnyvflzfnlmv7xz3gssr1n2rqgz24p1c15dyls2p7w"; + rev = "6d325abd043fd1bc31bea821f751996541bfc944"; + sha256 = "1kmk6q1hca97052dif1m3ygcr9zrnc3i2lrvkzlmsqb159mgfsgq"; }; dependencies = []; preFixup = '' @@ -698,11 +711,11 @@ rec { }; neomake = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "neomake-2018-04-08"; + name = "neomake-2018-04-17"; src = fetchgit { url = "https://github.com/benekastah/neomake"; - rev = "2363dc4141930ad1bc3ddbdaf76fc22bd4b7568b"; - sha256 = "1navsxwfws5acc96mhfqfk7vkns3a6r7ms21qp77ry20v57r0yxl"; + rev = "df72c7a2f1bdcc08b5dbcd86f165fe7cd5eb6e1f"; + sha256 = "1vlc0irqkl27dyh52wci36fcj80a67fcb9q9cpcbr94lwh4l7l26"; }; dependencies = []; @@ -797,11 +810,11 @@ rec { }; csv-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "csv-vim-2018-03-14"; + name = "csv-vim-2018-04-15"; src = fetchgit { url = "https://github.com/chrisbra/csv.vim"; - rev = "0b4c23fde82443ed4015ec90953d5a64e7c26266"; - sha256 = "0718vnccs6flla713f8mrwpw6r56w3rr5yr544rsc97p4p4m2vvg"; + rev = "5ca39450e6d40265086d929ff82ca2c9566fdc68"; + sha256 = "0i6j6c6027vpdcjq6znmkbdbbsdgwqb89jswkyhyx7ff3lwmzryq"; }; dependencies = []; @@ -852,11 +865,11 @@ rec { }; ctrlp-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "ctrlp-vim-2018-04-03"; + name = "ctrlp-vim-2018-04-10"; src = fetchgit { url = "https://github.com/ctrlpvim/ctrlp.vim"; - rev = "c13c1249fd3bf99c44eb80dfabd7eb7ea0fe09bd"; - sha256 = "1x5ykqx9g1hxi7fk7cg9hnh9778fpr65bkinbykqc306dbnrdy4g"; + rev = "4b9e7cac612902a25498cca49f13475fe1a821a4"; + sha256 = "1wa2kxiwipnxwd19gyv6grgqn0ms6zdxsj2xg80whkk3namlgg7m"; }; dependencies = []; @@ -940,11 +953,11 @@ rec { }; vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-2018-04-08"; + name = "vim-2018-04-13"; src = fetchgit { url = "https://github.com/dracula/vim"; - rev = "2d7c4af46938d01192ea35899467ebbdf8dbcf3f"; - sha256 = "0wfj5g0vnn3fnz793sllsbm30h6wzyb57g14b7wzfc9s2mxjlw05"; + rev = "7668d800a20c1f180bb49655d98378f2605ad616"; + sha256 = "07xcqickvw22yx5b91blvb463jn5dpn3drzf8y0nmpz08kfs4qfc"; }; dependencies = []; @@ -1017,11 +1030,11 @@ rec { }; vim-elixir = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-elixir-2018-03-30"; + name = "vim-elixir-2018-04-16"; src = fetchgit { url = "https://github.com/elixir-lang/vim-elixir"; - rev = "0d5f2b472fe4abb8b34de9f099f2ef770b449fc9"; - sha256 = "1afr4iwrzpmrjca0vxkk2zx1nsndp1fhprikdhhanr8060nhbmyy"; + rev = "36e54e1cf965d92f251ead359207d4a7b04cfdf2"; + sha256 = "0y296falc5l6k52vpw1f0bwzxgdbdjiljjg394s472228mnb2r3p"; }; dependencies = []; @@ -1105,11 +1118,11 @@ rec { }; vim-go = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-go-2018-04-08"; + name = "vim-go-2018-04-11"; src = fetchgit { url = "https://github.com/fatih/vim-go"; - rev = "0724aaa33ce33229e2c86e436596d31bb69ab292"; - sha256 = "15mkzhnphisrgn4r150q186hlnplwjmmxlk3pgr52fh1qxmk374y"; + rev = "7491209072ed4aa746e6fe7894f976ecd251801e"; + sha256 = "1a7fy8n9h383776jixlwxl8y3h8h5mixi0bcv4lv61x0g3xxh8gx"; }; dependencies = []; @@ -1204,22 +1217,22 @@ rec { }; vim-jsonnet = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-jsonnet-2017-04-06"; + name = "vim-jsonnet-2018-04-10"; src = fetchgit { url = "https://github.com/google/vim-jsonnet"; - rev = "2637e273713322befc476760809d46500e6088f3"; - sha256 = "0fxmqasznb3ra49r4j3fmksik7narnd3b6j1j4najp4l61x27ip2"; + rev = "1425166887329363381194adc457b02b663b1354"; + sha256 = "0kkpvp1r06l3glhgw4wv3ihqisjhs5m0x7mxgy388hy4r73fx08j"; }; dependencies = []; }; vim-maktaba = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-maktaba-2017-12-29"; + name = "vim-maktaba-2018-04-09"; src = fetchgit { url = "https://github.com/google/vim-maktaba"; - rev = "6e3be879bcf2d4e3c5bb56653e5eda9e08b84982"; - sha256 = "1nbpn6pcphrakd4icl24l4a68hjcq4a0aaq6kdwrvlsd1c3lk4dm"; + rev = "77a4dcecd7d65ae2bf362bd7d9055d2806a8edf3"; + sha256 = "0fvspd6q0dj9bqnv8xavfx7xwmg5g68r1kksfv54bbzckkhkw28w"; }; dependencies = []; @@ -1270,11 +1283,11 @@ rec { }; vim-snippets = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-snippets-2018-04-02"; + name = "vim-snippets-2018-04-16"; src = fetchgit { url = "https://github.com/honza/vim-snippets"; - rev = "3733ca9f1dae9b38d68eb9aaadf41dc9a9c9a01c"; - sha256 = "0jxbh3y262m7zs2hzbz5vjd5aqch3fzcnpgkvp8zfj3jyg3mwdsp"; + rev = "d081fa5117acdd972bd0a3ec1c0424e79ef6121e"; + sha256 = "0wrm5f15lf6hlyv9ca2a8jil14647acicsmaq34nr11gd375bvvc"; }; dependencies = []; @@ -1325,11 +1338,11 @@ rec { }; lightline-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "lightline-vim-2018-01-31"; + name = "lightline-vim-2018-04-14"; src = fetchgit { url = "https://github.com/itchyny/lightline.vim"; - rev = "78c43c144643e49c529a93b9eaa4eda12614f923"; - sha256 = "1g1s8bi6pzjc9kbqd1mn1d2ym6c90xf22dv2wfli0nyp6dsja2v2"; + rev = "e54d2ae512c9c081bfff9303cb22ffa94ed48ba3"; + sha256 = "042sfdwj46yv0bmf0cm5vm24j197isc3asdj4ymxzh5d6jy2i5qb"; }; dependencies = []; @@ -1380,11 +1393,11 @@ rec { }; vim-test-git = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-test-git-2018-03-25"; + name = "vim-test-git-2018-04-16"; src = fetchgit { url = "https://github.com/janko-m/vim-test.git"; - rev = "b62628512d57059af40d29edaec09716f947ac98"; - sha256 = "0c6yf5sk12gyn39jdpg26fsnb996fmiwmqs2p9mry93f4xsb6ciq"; + rev = "61dbd5621bcf0fe74c1008083d7f103f041fc7c7"; + sha256 = "0r5nxspznniviy0j89pmvksgvyzrzvx1qivabbcds7i62vqrxyw0"; }; dependencies = []; @@ -1501,11 +1514,11 @@ rec { }; fzf-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "fzf-vim-2018-03-09"; + name = "fzf-vim-2018-04-17"; src = fetchgit { url = "https://github.com/junegunn/fzf.vim"; - rev = "a362bc58f1fbbfbbbef749851006e46155979c7d"; - sha256 = "187d7aw5g7nr6cg5la86kdplb32zy58w1mfm3npb47qm9sydgql6"; + rev = "bbda33b402d92d43c75827bd54ee1932cf03a7b6"; + sha256 = "02f16kdgs1ahsja84ls1zpjidcg1yx1bhpp39fd7zqqvzw16mf1q"; }; dependencies = []; @@ -1699,11 +1712,11 @@ rec { }; vimtex = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vimtex-2018-04-07"; + name = "vimtex-2018-04-15"; src = fetchgit { url = "https://github.com/lervag/vimtex"; - rev = "0c0b44198407a861d2ad42eaed9e81f76e1a537f"; - sha256 = "0cs3vfvzvs5h9b0w1wziapcl2dfcmgyysrspz41wddaz68v1lqn0"; + rev = "a7fc6f62e8234fc0696cfe4325153e922e2fddd5"; + sha256 = "0bvv9k3zqdmvh80mwhrzxwjacrfq1x56ba7yqndggygfxb3l17mf"; }; dependencies = []; @@ -1769,11 +1782,11 @@ rec { }; vim-highlightedyank = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-highlightedyank-2018-03-29"; + name = "vim-highlightedyank-2018-04-17"; src = fetchgit { url = "https://github.com/machakann/vim-highlightedyank"; - rev = "c519c67245f6d15f18d3cd6550cc2c2471e357dc"; - sha256 = "002s015rn4n02xg8fwd8kklbprjx7aibmgrnikvgsvs9g1rj3wq4"; + rev = "6387f7cc3b768300d1fcf82d367dbcb8d16b6230"; + sha256 = "1ldyiy3qlxnxqkqa9yv39y5xkm7gma5gjy6nccqxxxjpjlyj39hb"; }; dependencies = []; @@ -1879,33 +1892,33 @@ rec { }; vim-grepper-git = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-grepper-git-2018-03-26"; + name = "vim-grepper-git-2018-04-13"; src = fetchgit { url = "https://github.com/mhinz/vim-grepper.git"; - rev = "635c14284aea79117f2cc9d07c18c8f6da23d85b"; - sha256 = "09qg5x36dl9z2hdrbw85kwldfhkgcvw6rpzar380v2a3l762l2nl"; + rev = "27e73cfa7970bf38fe9037c0053a2edbb622b000"; + sha256 = "1hy9rjvfgry9426gflw4k5qmwzmijwg3gzmmzavf7m7sagl101kd"; }; dependencies = []; }; vim-signify = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-signify-2018-03-26"; + name = "vim-signify-2018-04-17"; src = fetchgit { url = "https://github.com/mhinz/vim-signify"; - rev = "e76d00ccc00beb58d2278e6c63213ef4d365cace"; - sha256 = "018z1bgjil4is8rxxmxwvnbamhdnrir0big0giw7a7qf224z04bv"; + rev = "8351e5212f9415ccc1d9696518e1ec4337ad539f"; + sha256 = "12gix280mmsgn1z1ihbvzh67xqribrc39h670fzyn6302dzb05p0"; }; dependencies = []; }; vim-startify = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-startify-2018-04-03"; + name = "vim-startify-2018-04-10"; src = fetchgit { url = "https://github.com/mhinz/vim-startify"; - rev = "113655717e3ee1c4bc39e5d1093719a8e5750ee0"; - sha256 = "16bga9xrz4wga7h7spc9rsdj7m7hh2fqr23xnqflw1rx95c18avr"; + rev = "532f3db6be8c6e123abb3f6523c419b6b19436da"; + sha256 = "19inxsafsivdwgdvw59x3dbx65xkb09q0k2p66q4n57fj60bajmb"; }; dependencies = []; @@ -2014,11 +2027,11 @@ rec { }; haskell-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "haskell-vim-2018-01-25"; + name = "haskell-vim-2018-04-13"; src = fetchgit { url = "https://github.com/neovimhaskell/haskell-vim"; - rev = "430b529224c5f9ae53b148f814b7b1fc82b8b525"; - sha256 = "15z259b9b3wbklc8rndsq2rlhgccvxhfgd76yy80jqjmfmzib8kg"; + rev = "e027b314df128979dbd00dd94c9db080db156b5c"; + sha256 = "13dx1ifwa444q8zkwda4qha74xjm4jfhhk9lbgbj9p1mj7gvbl7f"; }; dependencies = []; @@ -2114,11 +2127,11 @@ rec { }; python-mode = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "python-mode-2018-03-31"; + name = "python-mode-2018-04-09"; src = fetchgit { url = "https://github.com/python-mode/python-mode"; - rev = "339945dc9232aaa336324a473a162d74c8d349e0"; - sha256 = "1h6znlxagvhv9k0vzaspp9ddq7kbdd3c9gscs12y15qxsz5rcali"; + rev = "5308d0cc241080057a58c1772ebd254f2922998d"; + sha256 = "1pkwhl9ab1fybc4sp5721xzlrzhzigf34w8zlmxby8v4nvmb8ggq"; }; dependencies = []; @@ -2169,22 +2182,22 @@ rec { }; committia-vim-git = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "committia-vim-git-2018-03-01"; + name = "committia-vim-git-2018-04-11"; src = fetchgit { url = "https://github.com/rhysd/committia.vim.git"; - rev = "78d5aceaeed3ba7d6ed503df7ae54a5e7505eed0"; - sha256 = "1wpvjkb62vb70yg7x3k84rk6fv0ykxms7bpn511z8dbs5v8xzzjg"; + rev = "02a317cb49689b2424232d607d218511f921f2e4"; + sha256 = "1bfdkj0jbhkklnzd894aigx1cply8bbpzkskvzmbsj7h7jm9iyz5"; }; dependencies = []; }; vim-grammarous = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-grammarous-2018-04-08"; + name = "vim-grammarous-2018-04-16"; src = fetchgit { url = "https://github.com/rhysd/vim-grammarous"; - rev = "42193a96aca0bcb4cd6ae1cb6fb2cc815ea92138"; - sha256 = "1fkjcc13v734bmgdimhkaf69xs8maqf0xylcbq424y4wfc8xhirq"; + rev = "fc7e73f2af96fb1745887dabde9bf8b945d0273d"; + sha256 = "0zfnbdsva140hc50s4fr1as5c1mn3hfm43x53sk50fylb51r9hr7"; }; dependencies = []; # use `:GrammarousCheck` to initialize checking @@ -2211,11 +2224,11 @@ rec { }; vim-puppet = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-puppet-2018-03-26"; + name = "vim-puppet-2018-04-12"; src = fetchgit { url = "https://github.com/rodjek/vim-puppet"; - rev = "e3eae632cf7f585fef2ede61fa7c5eb36fa94a6a"; - sha256 = "1dsr5rfmhz73dksxc8r2z6k881fmili9bb9a8hlbymm5xsq25a6a"; + rev = "dc1f681045c4d8bd126063ce000f7cc7b2f95097"; + sha256 = "18z2d2wpn5c3g857wprmdwp5pdb719dciyy0682hqpw8lfjn6zhv"; }; dependencies = []; @@ -2288,22 +2301,22 @@ rec { }; nerdtree = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "nerdtree-2018-04-02"; + name = "nerdtree-2018-04-10"; src = fetchgit { url = "https://github.com/scrooloose/nerdtree"; - rev = "a0e49c9b117d68dbc3e308b79529f8a3ab18e0f8"; - sha256 = "16ib92gfh87kgbk3z6dwgha1szjgpmcp15b5pajzzq9s7hrqfbp1"; + rev = "727770147a7589ab3a06722f4852c0237c8b3549"; + sha256 = "105vgwy7qs6l92dm6kfby7lmxv35v2hbpjk9z5sr0qak5rad4m6c"; }; dependencies = []; }; syntastic = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "syntastic-2018-04-08"; + name = "syntastic-2018-04-17"; src = fetchgit { url = "https://github.com/scrooloose/syntastic"; - rev = "e3a819c7cb3bf4397b0693303a247439668726f1"; - sha256 = "150bzrp738pdasss98x543fafqs3dvdfsj00m1lg3dzrb35vb79d"; + rev = "d31e270cc8affc6338a9ed44e2efcaec0ca4cd34"; + sha256 = "121a1mxgfng2y5zmivyyk02mca8pyw72crivf4f1q9nhn0barf57"; }; dependencies = []; @@ -2343,11 +2356,11 @@ rec { }; denite-nvim = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "denite-nvim-2018-04-07"; + name = "denite-nvim-2018-04-14"; src = fetchgit { url = "https://github.com/shougo/denite.nvim"; - rev = "0f8d216b6bcb4be708dce1adfe1a789fff57ca07"; - sha256 = "0bjz13gfzngcgabhnrd34zqg45wwjlgwkchv88p37k92pjgym063"; + rev = "c0c75a752577399be53aa7a7e235e6ff5387494c"; + sha256 = "1zbf2f0w02q8jwr824l6v0pxbc620rwfsah6mxyqbr5mxddcf1v6"; }; dependencies = []; @@ -2420,11 +2433,11 @@ rec { }; neosnippet-snippets = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "neosnippet-snippets-2018-04-04"; + name = "neosnippet-snippets-2018-04-15"; src = fetchgit { url = "https://github.com/shougo/neosnippet-snippets"; - rev = "04458823b3d1c4ffdb6c49a2fd25a36d55ed4dc4"; - sha256 = "095zfy6c11ddcrrpv48g1n39lcrnnkivyz66rbk36hy6kwjqqs5q"; + rev = "f453635c60998071299c3239c3d881f2be0c248e"; + sha256 = "1df6mzk5yjhjlmzgz7lr9aa69a973mzfxmwldqnpi6yjfnmjn04c"; }; dependencies = []; @@ -2464,11 +2477,11 @@ rec { }; unite-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "unite-vim-2018-01-12"; + name = "unite-vim-2018-04-14"; src = fetchgit { url = "https://github.com/shougo/unite.vim"; - rev = "cc0af4798f91e1c3a4a78ae028a3ac3e61d25eb3"; - sha256 = "1vj3bpdyv7wq0xnk9ladacy1giz5x92a62akasbd84bkd79gaxwv"; + rev = "7252fc334ed24722ad70867ba9e4aba125b611d7"; + sha256 = "0r2na9i15qfmshzk0wr845nyn8h8mpbkz5xanjibsch2xz6fps76"; }; dependencies = []; @@ -2559,11 +2572,11 @@ rec { }; vim-multiple-cursors = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-multiple-cursors-2018-04-08"; + name = "vim-multiple-cursors-2018-04-09"; src = fetchgit { url = "https://github.com/terryma/vim-multiple-cursors"; - rev = "f019fcd0d8c5d8a6c3a5993e476ce3be420cdc6e"; - sha256 = "1x3x20lhz9ficzspab5wphavh9kap3h3z1880n99rg3wdf3x9nry"; + rev = "8ae5dd3f4f344cc2abe79783a8b808e4093bf084"; + sha256 = "0zj5dm86daqzl6f76prlfalpsb3vxxl7x1k6kza8hcbyicaxsi49"; }; dependencies = []; @@ -2603,11 +2616,11 @@ rec { }; vim-quickrun = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-quickrun-2018-04-09"; + name = "vim-quickrun-2018-04-16"; src = fetchgit { url = "https://github.com/thinca/vim-quickrun"; - rev = "852986606abdf34c8bfc0d7c60ac7d6811bcf723"; - sha256 = "0j36b20wp7r2yjpmhxjbblw2zq6s3vjdz0nagy32wcf7q6vnkx5h"; + rev = "630ddff167e30c55d21985713ad6729adeb8e40b"; + sha256 = "0r2gg3a8q5627n28xgyhmb6275xwvg76ghc1wdy38xdszvykh024"; }; dependencies = []; @@ -2647,11 +2660,11 @@ rec { }; vim-solidity = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-solidity-2018-03-12"; + name = "vim-solidity-2018-04-17"; src = fetchgit { url = "https://github.com/tomlion/vim-solidity"; - rev = "2484882da8f2b73336c45c534e407053254a273d"; - sha256 = "0v3r6k3dirfs726301hy693y274hc8adi6nkpavmaqgy16k31v8d"; + rev = "569bbbedc3898236d5912fed0caf114936112ae4"; + sha256 = "1qpfbbrm4gjgvbkimhpxyl4fsdqkyw4raf17nw0ibqillz2d3pxx"; }; dependencies = []; @@ -2680,11 +2693,11 @@ rec { }; vim-dispatch = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-dispatch-2018-04-01"; + name = "vim-dispatch-2018-04-15"; src = fetchgit { url = "https://github.com/tpope/vim-dispatch"; - rev = "b80fd418082471e5b1150a97e8cab53035ffe502"; - sha256 = "0yvvm5sdv6vji3xn6x0cci5d0mcv3srgfw2bgrszbkdr0r02xs5s"; + rev = "f6b3e7799e6dce08869d7744aa7faa6528f065f5"; + sha256 = "1zn6c54hlygkx348vd7kgkfpdj93vsijhc2ma42k6s7vhwqfyylg"; }; dependencies = []; @@ -2702,11 +2715,11 @@ rec { }; vim-fugitive = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-fugitive-2018-04-06"; + name = "vim-fugitive-2018-04-15"; src = fetchgit { url = "https://github.com/tpope/vim-fugitive"; - rev = "b680699450805e01960184b60a2cf0d3a71088cf"; - sha256 = "1ixsmdn2yarb8yz5n0kdcjsif94r3myhv03l5a3f2lasly6hlk6m"; + rev = "40d78f07dee2ffab68abb9d6d1a9e27843df0fe0"; + sha256 = "16fh3n8sr57cfhfpilqhz9f3svhj4swa9yqjf4wicbw9zn40hrir"; }; dependencies = []; @@ -2856,11 +2869,11 @@ rec { }; youcompleteme = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "youcompleteme-2018-04-03"; + name = "youcompleteme-2018-04-16"; src = fetchgit { url = "https://github.com/valloric/youcompleteme"; - rev = "e8477c16b604303383d36793dfb7e8bbe22097bf"; - sha256 = "07pycgjzykncmwm7cj394gw6l9zxmjcd6nr21hirbkw1a7g4r3r3"; + rev = "6975efddc1a90514db7c8ee882ccac91f70ff4cc"; + sha256 = "1zmbb91fc0axavxln4milmn95d9szx8zwdiiwqjdyybkm29nxhc9"; }; dependencies = []; buildPhase = '' @@ -2882,11 +2895,11 @@ rec { }; vim-airline = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vim-airline-2018-04-08"; + name = "vim-airline-2018-04-17"; src = fetchgit { url = "https://github.com/vim-airline/vim-airline"; - rev = "d66b507b020b1f14f08bc7a6503573930b28a476"; - sha256 = "1cdw628gs547p41yqyf3liy4i03czw9cgfbcq85w3ad2v2c9cc3p"; + rev = "3ad4a18d858bb80d45a1c054b845021abe5c8f0d"; + sha256 = "1sgf9czgajba8nf7xbfa2dm26vw356ca55m1myaxlkqrlcckcvav"; }; dependencies = []; @@ -3035,6 +3048,17 @@ rec { }; + bats-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation + name = "bats-vim-2013-07-03"; + src = fetchgit { + url = "https://github.com/vim-scripts/bats.vim"; + rev = "3c283f594ff8bc7fb0c25cd07ebef0f17385f94a"; + sha256 = "06f3hdf7y5gpwmc6inrhk938qmn7cr6mbk00amrnl1qjvk09givx"; + }; + dependencies = []; + + }; + changeColorScheme-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation name = "changeColorScheme-vim-2010-10-17"; src = fetchgit { @@ -3113,33 +3137,33 @@ rec { }; vimoutliner = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vimoutliner-2018-03-21"; + name = "vimoutliner-2018-04-09"; src = fetchgit { url = "https://github.com/vimoutliner/vimoutliner"; - rev = "85975d25863d860d6e84e4980b7551618b527536"; - sha256 = "0m8v6m4gi1643wh4x434yx440sa58h9fsv9ffz1my8syc412f7jx"; + rev = "4f12628247940d98eedd594961695dc504261058"; + sha256 = "1z44zf9wvd6mc1zb6ywrkjw87yrj1blmc5s03xk9zv5q8hskjl78"; }; dependencies = []; }; vimwiki = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "vimwiki-2018-04-08"; + name = "vimwiki-2018-04-17"; src = fetchgit { url = "https://github.com/vimwiki/vimwiki"; - rev = "86a8604c4e127fa397c513471250c05b305244d3"; - sha256 = "195sysniq25azydxlahik9ybgg7gz9w7z7yc4fwr0s2hzlnk6ir0"; + rev = "90dc1e58717bd25798bb16d3badab8908b619912"; + sha256 = "01a2gy1r4k5gw7vrdn6p0vmybb2s0gf9q0w07qps5cnxapsggxk9"; }; dependencies = []; }; ale = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "ale-2018-04-08"; + name = "ale-2018-04-17"; src = fetchgit { url = "https://github.com/w0rp/ale"; - rev = "2f2dcb84444f440ceb4b35010b861738216525f6"; - sha256 = "1yrqlg44wqhsnrrbp6f3j2v8fi4sg2hv4j8c1sb1grqj1f306gca"; + rev = "f9ba3d924fc445ceea6ab7a6700b95dd12d268ca"; + sha256 = "12905gq95xif3963720yqywvzpvxz7j8qyk0i6pnmzjf92xnk8xm"; }; dependencies = []; @@ -3266,11 +3290,11 @@ rec { }; zig-vim = buildVimPluginFrom2Nix { # created by nix#NixDerivation - name = "zig-vim-2018-03-16"; + name = "zig-vim-2018-04-15"; src = fetchgit { url = "https://github.com/zig-lang/zig.vim"; - rev = "7d2905a945308cc5ac4e0c32d9f5be86edf08399"; - sha256 = "1afy9md2xb7acrphwmplyrln8h6cckbfd6a6ls0hlmb3jybzk0zy"; + rev = "eba14b79890b674432a78291ff0f16de4da2ed08"; + sha256 = "1yj7gijwbsc1vrxlb158pf083ahrpgg5g7j3gjrkrazdcmmx5d2j"; }; dependencies = []; diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names index 42de002d1eaf..fcc4fcaa76f4 100644 --- a/pkgs/misc/vim-plugins/vim-plugin-names +++ b/pkgs/misc/vim-plugins/vim-plugin-names @@ -87,6 +87,7 @@ "github:jnurmine/zenburn" "github:jonbri/vim-colorstepper" "github:joonty/vim-xdebug" +"github:JuliaEditorSupport/julia-vim" "github:junegunn/fzf.vim" "github:junegunn/goyo.vim" "github:junegunn/limelight.vim" @@ -246,6 +247,7 @@ "github:vim-scripts/align" "github:vim-scripts/argtextobj.vim" "github:vim-scripts/a.vim" +"github:vim-scripts/bats.vim" "github:vim-scripts/changeColorScheme.vim" "github:vim-scripts/Colour-Sampler-Pack" "github:vim-scripts/Improved-AnsiEsc" diff --git a/pkgs/misc/vscode-extensions/cpptools/default.nix b/pkgs/misc/vscode-extensions/cpptools/default.nix index 87c782222fc5..c537aa8a1f92 100644 --- a/pkgs/misc/vscode-extensions/cpptools/default.nix +++ b/pkgs/misc/vscode-extensions/cpptools/default.nix @@ -120,9 +120,9 @@ vscode-utils.buildVscodeMarketplaceExtension { meta = with stdenv.lib; { license = licenses.unfree; - maintainer = [ maintainers.jraygauthier ]; + maintainers = [ maintainers.jraygauthier ]; # A 32 bit linux would also be possible with some effort (specific download of binaries + # patching of the elf files with 32 bit interpreter). platforms = [ "x86_64-linux" ]; }; -} \ No newline at end of file +} diff --git a/pkgs/misc/vscode-extensions/python/default.nix b/pkgs/misc/vscode-extensions/python/default.nix index 4e28de871b84..430ce192ed0d 100644 --- a/pkgs/misc/vscode-extensions/python/default.nix +++ b/pkgs/misc/vscode-extensions/python/default.nix @@ -36,6 +36,6 @@ vscode-utils.buildVscodeMarketplaceExtension { meta = with lib; { license = licenses.mit; - maintainer = [ maintainers.jraygauthier ]; + maintainers = [ maintainers.jraygauthier ]; }; -} \ No newline at end of file +} diff --git a/pkgs/misc/vscode-extensions/vscode-utils.nix b/pkgs/misc/vscode-extensions/vscode-utils.nix index 83cb559dca12..4c095278f918 100644 --- a/pkgs/misc/vscode-extensions/vscode-utils.nix +++ b/pkgs/misc/vscode-extensions/vscode-utils.nix @@ -37,7 +37,7 @@ let installPhase = '' mkdir -p "$out/share/${extendedPkgName}/extensions/${vscodeExtUniqueId}" - find . -mindepth 1 -maxdepth 1 | xargs mv -t "$out/share/${extendedPkgName}/extensions/${vscodeExtUniqueId}/" + find . -mindepth 1 -maxdepth 1 | xargs -d'\n' mv -t "$out/share/${extendedPkgName}/extensions/${vscodeExtUniqueId}/" ''; }); diff --git a/pkgs/os-specific/bsd/default.nix b/pkgs/os-specific/bsd/default.nix new file mode 100644 index 000000000000..a8301ea2a8fc --- /dev/null +++ b/pkgs/os-specific/bsd/default.nix @@ -0,0 +1,8 @@ +{ callPackages, recurseIntoAttrs }: + +rec { + netbsd = recurseIntoAttrs (callPackages ./netbsd {}); + openbsd = recurseIntoAttrs (callPackages ./openbsd { + inherit (netbsd) compat netBSDDerivation libcurses; + }); +} diff --git a/pkgs/os-specific/bsd/netbsd/compat-setup-hook.sh b/pkgs/os-specific/bsd/netbsd/compat-setup-hook.sh new file mode 100644 index 000000000000..d47d602e2edb --- /dev/null +++ b/pkgs/os-specific/bsd/netbsd/compat-setup-hook.sh @@ -0,0 +1,18 @@ +setupCompatFlags() { + # The `depHostOffset` describes how the host platform of the dependencies + # are slid relative to the depending package. It is brought into scope of + # the environment hook defined as the role of the dependency being applied. + case $depHostOffset in + -1) local role='BUILD_' ;; + 0) local role='' ;; + 1) local role='TARGET_' ;; + *) echo "cc-wrapper: Error: Cannot be used with $depHostOffset-offset deps" >2; + return 1 ;; + esac + + export NIX_${role}LDFLAGS+=" -lnbcompat" + export NIX_${role}CFLAGS_COMPILE+=" -DHAVE_NBTOOL_CONFIG_H" + export NIX_${role}CFLAGS_COMPILE+=" -include nbtool_config.h" +} + +addEnvHooks "$hostOffset" setupCompatFlags diff --git a/pkgs/os-specific/bsd/netbsd/default.nix b/pkgs/os-specific/bsd/netbsd/default.nix new file mode 100644 index 000000000000..42633232c71a --- /dev/null +++ b/pkgs/os-specific/bsd/netbsd/default.nix @@ -0,0 +1,405 @@ +{ stdenv, hostPlatform, fetchcvs, lib, groff, mandoc, zlib, coreutils +, yacc, flex, libressl, bash }: + +let + fetchNetBSD = path: version: sha256: fetchcvs { + cvsRoot = ":pserver:anoncvs@anoncvs.NetBSD.org:/cvsroot"; + module = "src/${path}"; + inherit sha256; + tag = "netbsd-${builtins.replaceStrings ["."] ["-"] version}-RELEASE"; + }; + + netBSDDerivation = attrs: stdenv.mkDerivation ((rec { + name = "${attrs.pname or (baseNameOf attrs.path)}-netbsd-${attrs.version}"; + src = fetchNetBSD attrs.path attrs.version attrs.sha256; + + extraPaths = [ ]; + + nativeBuildInputs = [ makeMinimal mandoc groff install yacc flex ]; + buildInputs = [ compat ]; + installFlags = [ "includes" ]; + + # These should be coverd in nbcompat, but are missing, sadly + NIX_CFLAGS_COMPILE = [ + "-D__noinline=" + "-D__warn_references(a,b)=" + "-D__strong_alias(a,b)=" + "-D__va_list=va_list" + ]; + + # Definitions passed to share/mk/*.mk. Should be pretty simple - + # eventually maybe move it to a configure script. + DESTDIR = "$(out)"; + TOOLDIR = "$(out)"; + USETOOLS = "never"; + NOCLANGERROR="yes"; + NOGCCERROR="yes"; + LEX = "flex"; + + # libs will be provided by cc-wrapper + LIBCRT0=""; + LIBCRTI=""; + LIBCRTEND=""; + LIBCRTBEGIN=""; + LIBC=""; + LIBUTIL=""; + LIBSSL = ""; + LIBCRYPTO = ""; + LIBCURSES = ""; + "LIBDO.terminfo" = "_external"; + _GCC_CRTBEGIN = ""; + _GCC_CRTBEGINS = ""; + _GCC_CRTEND = ""; + _GCC_CRTENDS = ""; + _GCC_LIBGCCDIR = ""; + _GCC_CRTI = ""; + _GCC_CRTDIR = ""; + _GCC_CRTN = ""; + + # all dirs will be prefixed with DESTDIR + BINDIR = "/bin"; + LIBDIR = "/lib"; + SHLIBDIR = "/lib"; + MANDIR = "/share/man"; + INFODIR = "/share/info"; + DOCDIR = "/share/doc"; + LOCALEDIR = "/share/locale"; + X11BINDIR = "/bin"; + X11USRLIBDIR = "/lib"; + X11MANDIR = "/share/man"; + SHLINKDIR = "/usr/libexec"; + + HOST_SH = "${bash}/bin/sh"; + + # not using bsd binutils + SHLIB_WARNTEXTREL = "no"; + SHLIB_MKMAP = "no"; + OBJCOPY = "true"; + PRESERVE = "-p"; + + MACHINE_ARCH = hostPlatform.parsed.cpu.name; + MACHINE_CPU = hostPlatform.parsed.cpu.name; + + # NetBSD makefiles should be able to detect this + # but without they end up using gcc on Darwin stdenv + preConfigure = '' + export HAVE_${if stdenv.cc.isGNU then "GCC" else "LLVM"}=${lib.head (lib.splitString "." (lib.getVersion stdenv.cc.cc))} + '' + lib.optionalString (!builtins.hasAttr "nativeBuildInputs" attrs) '' + # hack until #38657 is fixed + export PATH=${install}/bin:$PATH + ''; + + postUnpack = '' + # merge together all extra paths + # there should be a better way to do this + sourceRoot=$PWD/$sourceRoot + export NETBSDSRCDIR=$sourceRoot + export BSDSRCDIR=$NETBSDSRCDIR + chmod -R u+w $sourceRoot + for path in $extraPaths; do + cd $path + find . -type d -exec mkdir -p $sourceRoot/\{} \; + find . -type f -exec cp -pr \{} $sourceRoot/\{} \; + chmod -R u+w $sourceRoot + done + + cd $sourceRoot + if [ -d ${attrs.path} ] + then sourceRoot=$sourceRoot/${attrs.path} + fi + ''; + + # need to create directories for xinstall to work + preInstall = '' + mkdir -p $out$BINDIR $out$LIBDIR $out$INFODIR \ + $out$DOCDIR $out$LOCALEDIR + for i in 1 2 3 4 5 6 7 8 9; do + mkdir -p $out$MANDIR/man$i $out$MANDIR/html$i $out$DOCDIR/reference/ref$i + done + mkdir -p $out/usr/include + ''; + + postInstall = '' + # Remove lingering /usr references + if [ -d $out/usr ]; then + cd $out/usr + find . -type d -exec mkdir -p $out/\{} \; + find . -type f -exec mv \{} $out/\{} \; + find . -type d -delete + fi + + find $out -type d -empty -delete + ''; + + meta = with lib; { + maintainers = with maintainers; [matthewbauer]; + platforms = platforms.unix; + license = licenses.bsd2; + }; + }) // attrs); + + # BOOTSTRAPPING + makeMinimal = netBSDDerivation rec { + path = "tools/make"; + sha256 = "0l4794zwj2haark3azf9xwcwqlkbrifhb2glaa9iba4dkg2mklsb"; + version = "7.1.2"; + + buildInputs = []; + nativeBuildInputs = []; + NIX_CFLAGS_COMPILE = ""; + NIX_LDFLAGS = ""; + + patchPhase = '' + patchShebangs configure + ${make.patchPhase} + ''; + buildPhase = "sh ./buildmake.sh"; + installPhase = '' + install -D nbmake $out/bin/nbmake + ln -s $out/bin/nbmake $out/bin/make + mkdir -p $out/share + cp -r ../../share/mk $out/share/mk + ''; + extraPaths = [ make.src ] ++ make.extraPaths; + }; + + compat = netBSDDerivation { + path = "tools/compat"; + sha256 = "17phkfafybxwhzng44k5bhmag6i55br53ky1nwcmw583kg2fa86z"; + version = "7.1.2"; + + setupHook = ./compat-setup-hook.sh; + + # override defaults to prevent infinite recursion + nativeBuildInputs = [ makeMinimal ]; + buildInputs = [ zlib ]; + NIX_CFLAGS_COMPILE = ""; + NIX_LDFLAGS = ""; + + # temporarily use gnuinstall for bootstrapping + # bsdinstall will be built later + makeFlags = "INSTALL=${coreutils}/bin/install"; + RENAME = "-D"; + + postInstall = '' + mv $out/include/compat/* $out/include + rmdir $out/include/compat + + # why aren't these installed by netbsd? + install -D compat_defs.h $out/include/compat_defs.h + install -D $NETBSDSRCDIR/include/cdbw.h $out/include/cdbw.h + install -D $NETBSDSRCDIR/sys/sys/cdbr.h $out/include/cdbr.h + install -D $NETBSDSRCDIR/sys/sys/featuretest.h \ + $out/include/sys/featuretest.h + install -D $NETBSDSRCDIR/sys/sys/md5.h $out/include/md5.h + install -D $NETBSDSRCDIR/sys/sys/rmd160.h $out/include/rmd160.h + install -D $NETBSDSRCDIR/sys/sys/sha1.h $out/include/sha1.h + install -D $NETBSDSRCDIR/sys/sys/sha2.h $out/include/sha2.h + install -D $NETBSDSRCDIR/include/vis.h $out/include/vis.h + ''; + extraPaths = [ libc.src libutil.src + (fetchNetBSD "include" "7.1.2" "1vc58xrhrp202biiv1chhlh0jwnjr7k3qq91pm46k6v5j95j0qwp") + (fetchNetBSD "external/bsd/flex" "7.1.2" "0m0m72r3zzc9gi432h3xkqdzspr4n0hj4m8h7j74pwbvpfg9d9qq") + (fetchNetBSD "sys/sys" "7.1.2" "1vwnv5nk7rlgn5w9nkdqj9652hmwmfwqxj3ymcz0zk10abbaib93") + ] ++ libutil.extraPaths ++ libc.extraPaths; + }; + + install = netBSDDerivation { + path = "usr.bin/xinstall"; + version = "7.1.2"; + sha256 = "0nzhyh714m19h61m45gzc5dszkbafp5iaphbp5mza6w020fzf2y8"; + extraPaths = [ mtree.src make.src ]; + nativeBuildInputs = [ makeMinimal mandoc groff compat ]; + RENAME = "-D"; + }; + # END BOOTSTRAPPING + + libutil = netBSDDerivation { + path = "lib/libutil"; + version = "7.1.2"; + sha256 = "12848ynizz13mvn2kndrkq482xhkw323b7c8fg0zli1nhfsmwsm8"; + extraPaths = [ + (fetchNetBSD "common/lib/libutil" "7.1.2" "0q3ixrf36lip1dx0gafs0a03qfs5cs7n0myqq7af4jpjd6kh1831") + ]; + }; + + libc = netBSDDerivation { + path = "lib/libc"; + version = "7.1.2"; + sha256 = "13rcx3mbx2644z01zgk9gggdfr0hqdbsvd7zrsm2l13yf9aix6pg"; + extraPaths = [ + (fetchNetBSD "common/lib/libc" "7.1.2" "1va8zd4lqyrc1d0c9q04r8y88cfxpkhwcxasggxxvhksd3khkpha") + ]; + }; + + make = netBSDDerivation { + path = "usr.bin/make"; + sha256 = "0srkkg6qdzqlccfi4xh19gl766ks6hpss76bnfvwmd0zg4q4zdar"; + version = "7.1.2"; + patchPhase = '' + # make needs this to pick up our sys make files + NIX_CFLAGS_COMPILE+=" -D_PATH_DEFSYSPATH=\"$out/share/mk\"" + + # can't set owner or group in Nix build + # maybe there is a better way to trick it? + substituteInPlace $NETBSDSRCDIR/share/mk/bsd.prog.mk \ + --replace '-o ''${SCRIPTSOWN_''${.ALLSRC:T}:U''${SCRIPTSOWN}}' "" \ + --replace '-g ''${SCRIPTSGRP_''${.ALLSRC:T}:U''${SCRIPTSGRP}}' "" \ + --replace '-o ''${RUMPBINOWN} -g ''${RUMPBINGRP}' "" \ + --replace '-o ''${BINOWN} -g ''${BINGRP}' "" \ + --replace '-o ''${RUMPBINOWN} -g ''${RUMPBINGRP}' "" \ + --replace '-o ''${DEBUGOWN} -g ''${DEBUGGRP}' "" + substituteInPlace $NETBSDSRCDIR/share/mk/bsd.doc.mk \ + --replace '-o ''${DOCOWN} -g ''${DOCGRP}' "" + substituteInPlace $NETBSDSRCDIR/share/mk/bsd.man.mk \ + --replace '-o ''${MANOWN} -g ''${MANGRP}' "" + substituteInPlace $NETBSDSRCDIR/share/mk/bsd.files.mk \ + --replace '-o ''${FILESOWN_''${.ALLSRC:T}:U''${FILESOWN}}' "" \ + --replace '-g ''${FILESGRP_''${.ALLSRC:T}:U''${FILESGRP}}' "" + substituteInPlace $NETBSDSRCDIR/share/mk/bsd.inc.mk \ + --replace '-o ''${BINOWN} -g ''${BINGRP}' "" + substituteInPlace $NETBSDSRCDIR/share/mk/bsd.lib.mk \ + --replace '-o ''${DEBUGOWN} -g ''${DEBUGGRP}' "" \ + --replace '-o ''${LIBOWN} -g ''${LIBGRP}' "" + + substituteInPlace $NETBSDSRCDIR/share/mk/Makefile \ + --replace /usr/share/mk /share/mk + substituteInPlace $NETBSDSRCDIR/share/mk/bsd.sys.mk \ + --replace '-Wl,--fatal-warnings' "" + substituteInPlace $NETBSDSRCDIR/share/mk/bsd.lib.mk \ + --replace ' ''${_ARFL} ''${.TARGET} `NM=''${NM} ''${LORDER} ''${.ALLSRC:M*o} | ''${TSORT}`' ' ''${_ARFL} ''${.TARGET} ''${.ALLSRC:M*o}' \ + --replace '-Wl,-soname,''${_LIB}.so.''${SHLIB_SOVERSION}' "" \ + --replace '-Wl,--whole-archive' "" \ + --replace '-Wl,--no-whole-archive' "" + ''; + postInstall = '' + (cd $NETBSDSRCDIR/share/mk && make install) + ''; + extraPaths = [ + (fetchNetBSD "share/mk" "7.1.2" "0570v0siv0wygn8ygs1yy9pgk9xjw9x1axr5qg4xrddv3lskf9xa") + ]; + }; + + mtree = netBSDDerivation { + path = "usr.sbin/mtree"; + version = "7.1.2"; + sha256 = "1dhsyfvcm67kf5zdbg5dmx5y8fimnbll6qxwp3gjfmbxqigmc52m"; + }; + +in rec { + inherit compat libc libutil install make mtree netBSDDerivation; + + getent = netBSDDerivation { + path = "usr.bin/getent"; + sha256 = "1ylhw4dnpyrmcy8n5kjcxywm8qc9p124dqnm17x4magiqx1kh9iz"; + version = "7.1.2"; + patches = [ ./getent.patch ]; + }; + + getconf = netBSDDerivation { + path = "usr.bin/getconf"; + sha256 = "122vslz4j3h2mfs921nr2s6m078zcj697yrb75rwp2hnw3qz4s8q"; + version = "7.1.2"; + }; + + fts = netBSDDerivation { + pname = "fts"; + path = "include/fts.h"; + sha256 = "01d4fpxvz1pgzfk5xznz5dcm0x0gdzwcsfm1h3d0xc9kc6hj2q77"; + version = "7.1.2"; + nativeBuildInputs = [ ]; + extraPaths = [ + (fetchNetBSD "lib/libc/gen/fts.c" "7.1.2" "1yfd2liypj6xky2h0mgxi5lgpflmkkg4zf3ii3apz5cf8jq9gmn9") + (fetchNetBSD "lib/libc/include/namespace.h" "7.1.2" "0kwd4v8y0mfjhmwplsk52pvzbcpvpp2qy2g8c0jmfraam63q6q1y") + (fetchNetBSD "lib/libc/gen/fts.3" "7.1.2" "1asxw0n3fhjdadwkkq3xplfgqgl3q32w1lyrvbakfa3gs0wz5zc1") + ]; + buildPhase = '' + cc -c -Iinclude -Ilib/libc/include lib/libc/gen/fts.c \ + -o lib/libc/gen/fts.o + ar -rsc libfts.a lib/libc/gen/fts.o + ''; + installPhase = '' + install -D lib/libc/gen/fts.3 $out/share/man/man3/fts.3 + install -D include/fts.h $out/include/fts.h + install -D lib/libc/include/namespace.h $out/include/namespace.h + install -D libfts.a $out/lib/libfts.a + ''; + setupHook = ./fts-setup-hook.sh; + }; + + games = netBSDDerivation { + path = "games"; + sha256 = "04wjsang8f8kxsifiayklbxaaxmm3vx9rfr91hfbxj4hk8gkqzy1"; + version = "7.1.2"; + patchPhase = '' + sed -i '1i #include <time.h>' adventure/save.c + ''; + }; + + who = netBSDDerivation { + path = "usr.bin/who"; + version = "7.1.2"; + sha256 = "17ffwww957m3qw0b6fkgjpp12pd5ydg2hs9dxkkw0qpv11j00d88"; + }; + + finger = netBSDDerivation { + path = "usr.bin/finger"; + sha256 = "0jl672z50f2yf7ikp682b3xrarm6bnrrx9vi94xnp2fav8m8zfyi"; + version = "7.1.2"; + extraPaths = [ who.src ]; + }; + + fingerd = netBSDDerivation { + path = "usr.bin/fingerd"; + sha256 = "04wjsang8f8kxsifiayklbxaaxmm3vx9rfr91hfbxj4hk8gkqz00"; + version = "7.1.2"; + }; + + libedit = netBSDDerivation { + path = "lib/libedit"; + buildInputs = [ compat libterminfo ]; + patchPhase = '' + sed -i '1i #undef bool_t' el.h + ''; + version = "7.1.2"; + sha256 = "0qvr52j4qih10m7fa8nddn1psyjy9l0pa4ix02acyssjvgbz2kca"; + }; + + libterminfo = netBSDDerivation { + path = "lib/libterminfo"; + version = "7.1.2"; + sha256 = "06plg0bjqgbb0aghpb9qlk8wkp1l2izdlr64vbr5laqyw8jg84zq"; + buildInputs = [ compat tic nbperf ]; + extraPaths = [ + (fetchNetBSD "share/terminfo" "7.1.2" "1z5vzq8cw24j05r6df4vd6r57cvdbv7vbm4h962kplp14xrbg2h3") + ]; + }; + + libcurses = netBSDDerivation { + path = "lib/libcurses"; + version = "7.1.2"; + sha256 = "04djah9dadzw74nswn0xydkxn900kav8xdvxlxdl50nbrynxg9yf"; + buildInputs = [ compat libterminfo ]; + MKDOC = "no"; # missing vfontedpr + }; + + nbperf = netBSDDerivation { + path = "usr.bin/nbperf"; + version = "7.1.2"; + sha256 = "0gzm0zv2400lasnsswnjw9bwzyizhxzdbrcjwcl1k65aj86aqyqb"; + }; + + tic = netBSDDerivation { + path = "tools/tic"; + version = "7.1.2"; + sha256 = "092y7db7k4kh2jq8qc55126r5qqvlb8lq8mhmy5ipbi36hwb4zrz"; + HOSTPROG = "tic"; + buildInputs = [ compat nbperf ]; + extraPaths = [ + libterminfo.src + (fetchNetBSD "usr.bin/tic" "7.1.2" "1ghwsaag4gbwvgp3lfxscnh8hn27n8cscwmgjwp3bkx5vl85nfsa") + (fetchNetBSD "tools/Makefile.host" "7.1.2" "076r3amivb6xranpvqjmg7x5ibj4cbxaa3z2w1fh47h7d55dw9w8") + ]; + }; + +} diff --git a/pkgs/os-specific/bsd/netbsd/fts-setup-hook.sh b/pkgs/os-specific/bsd/netbsd/fts-setup-hook.sh new file mode 100644 index 000000000000..6b7064174931 --- /dev/null +++ b/pkgs/os-specific/bsd/netbsd/fts-setup-hook.sh @@ -0,0 +1,16 @@ +ftsLdflags() { + # The `depHostOffset` describes how the host platform of the dependencies + # are slid relative to the depending package. It is brought into scope of + # the environment hook defined as the role of the dependency being applied. + case $depHostOffset in + -1) local role='BUILD_' ;; + 0) local role='' ;; + 1) local role='TARGET_' ;; + *) echo "cc-wrapper: Error: Cannot be used with $depHostOffset-offset deps" >2; + return 1 ;; + esac + + export NIX_${role}LDFLAGS+=" -lfts" +} + +addEnvHooks "$hostOffset" ftsLdflags diff --git a/pkgs/os-specific/bsd/netbsd/getent.patch b/pkgs/os-specific/bsd/netbsd/getent.patch new file mode 100644 index 000000000000..e9e34d19a315 --- /dev/null +++ b/pkgs/os-specific/bsd/netbsd/getent.patch @@ -0,0 +1,455 @@ +Author: Matthew Bauer +Description: Remove unavailable getent databases +Version: 7.1.2 +--- a/getent.c 2018-04-16 13:33:49.000000000 -0500 ++++ b/getent.c 2018-04-16 13:29:30.000000000 -0500 +@@ -42,7 +42,6 @@ + #include <grp.h> + #include <limits.h> + #include <netdb.h> +-#include <netgroup.h> + #include <pwd.h> + #include <stdio.h> + #include <stdarg.h> +@@ -57,27 +56,16 @@ + #include <arpa/nameser.h> + + #include <net/if.h> +-#include <net/if_ether.h> + + #include <netinet/in.h> /* for INET6_ADDRSTRLEN */ + +-#include <rpc/rpcent.h> +- +-#include <disktab.h> +- + static int usage(void) __attribute__((__noreturn__)); + static int parsenum(const char *, unsigned long *); +-static int disktab(int, char *[]); +-static int gettytab(int, char *[]); +-static int ethers(int, char *[]); + static int group(int, char *[]); + static int hosts(int, char *[]); +-static int netgroup(int, char *[]); + static int networks(int, char *[]); + static int passwd(int, char *[]); +-static int printcap(int, char *[]); + static int protocols(int, char *[]); +-static int rpc(int, char *[]); + static int services(int, char *[]); + static int shells(int, char *[]); + +@@ -92,17 +80,11 @@ + const char *name; + int (*callback)(int, char *[]); + } databases[] = { +- { "disktab", disktab, }, +- { "ethers", ethers, }, +- { "gettytab", gettytab, }, + { "group", group, }, + { "hosts", hosts, }, +- { "netgroup", netgroup, }, + { "networks", networks, }, + { "passwd", passwd, }, +- { "printcap", printcap, }, + { "protocols", protocols, }, +- { "rpc", rpc, }, + { "services", services, }, + { "shells", shells, }, + +@@ -195,49 +177,6 @@ + (void)printf("\n"); + } + +- +- /* +- * ethers +- */ +- +-static int +-ethers(int argc, char *argv[]) +-{ +- char hostname[MAXHOSTNAMELEN + 1], *hp; +- struct ether_addr ea, *eap; +- int i, rv; +- +- assert(argc > 1); +- assert(argv != NULL); +- +-#define ETHERSPRINT (void)printf("%-17s %s\n", ether_ntoa(eap), hp) +- +- rv = RV_OK; +- if (argc == 2) { +- warnx("Enumeration not supported on ethers"); +- rv = RV_NOENUM; +- } else { +- for (i = 2; i < argc; i++) { +- if ((eap = ether_aton(argv[i])) == NULL) { +- eap = &ea; +- hp = argv[i]; +- if (ether_hostton(hp, eap) != 0) { +- rv = RV_NOTFOUND; +- break; +- } +- } else { +- hp = hostname; +- if (ether_ntohost(hp, eap) != 0) { +- rv = RV_NOTFOUND; +- break; +- } +- } +- ETHERSPRINT; +- } +- } +- return rv; +-} +- + /* + * group + */ +@@ -298,7 +237,7 @@ + hosts(int argc, char *argv[]) + { + struct hostent *he; +- char addr[IN6ADDRSZ]; ++ char addr[NS_IN6ADDRSZ]; + int i, rv; + + assert(argc > 1); +@@ -312,9 +251,9 @@ + } else { + for (i = 2; i < argc; i++) { + if (inet_pton(AF_INET6, argv[i], (void *)addr) > 0) +- he = gethostbyaddr(addr, IN6ADDRSZ, AF_INET6); ++ he = gethostbyaddr(addr, NS_IN6ADDRSZ, AF_INET6); + else if (inet_pton(AF_INET, argv[i], (void *)addr) > 0) +- he = gethostbyaddr(addr, INADDRSZ, AF_INET); ++ he = gethostbyaddr(addr, NS_INADDRSZ, AF_INET); + else + he = gethostbyname(argv[i]); + if (he != NULL) +@@ -330,48 +269,6 @@ + } + + /* +- * netgroup +- */ +-static int +-netgroup(int argc, char *argv[]) +-{ +- int rv, i; +- bool first; +- const char *host, *user, *domain; +- +- assert(argc > 1); +- assert(argv != NULL); +- +-#define NETGROUPPRINT(s) (((s) != NULL) ? (s) : "") +- +- rv = RV_OK; +- if (argc == 2) { +- warnx("Enumeration not supported on netgroup"); +- rv = RV_NOENUM; +- } else { +- for (i = 2; i < argc; i++) { +- setnetgrent(argv[i]); +- first = true; +- while (getnetgrent(&host, &user, &domain) != 0) { +- if (first) { +- first = false; +- (void)fputs(argv[i], stdout); +- } +- (void)printf(" (%s,%s,%s)", +- NETGROUPPRINT(host), +- NETGROUPPRINT(user), +- NETGROUPPRINT(domain)); +- } +- if (!first) +- (void)putchar('\n'); +- endnetgrent(); +- } +- } +- +- return rv; +-} +- +- /* + * networks + */ + +@@ -464,227 +361,6 @@ + return rv; + } + +-static char * +-mygetent(const char * const * db_array, const char *name) +-{ +- char *buf = NULL; +- int error; +- +- switch (error = cgetent(&buf, db_array, name)) { +- case -3: +- warnx("tc= loop in record `%s' in `%s'", name, db_array[0]); +- break; +- case -2: +- warn("system error fetching record `%s' in `%s'", name, +- db_array[0]); +- break; +- case -1: +- case 0: +- break; +- case 1: +- warnx("tc= reference not found in record for `%s' in `%s'", +- name, db_array[0]); +- break; +- default: +- warnx("unknown error %d in record `%s' in `%s'", error, name, +- db_array[0]); +- break; +- } +- return buf; +-} +- +-static char * +-mygetone(const char * const * db_array, int first) +-{ +- char *buf = NULL; +- int error; +- +- switch (error = (first ? cgetfirst : cgetnext)(&buf, db_array)) { +- case -2: +- warnx("tc= loop in `%s'", db_array[0]); +- break; +- case -1: +- warn("system error fetching record in `%s'", db_array[0]); +- break; +- case 0: +- case 1: +- break; +- case 2: +- warnx("tc= reference not found in `%s'", db_array[0]); +- break; +- default: +- warnx("unknown error %d in `%s'", error, db_array[0]); +- break; +- } +- return buf; +-} +- +-static void +-capprint(const char *cap) +-{ +- char *c = strchr(cap, ':'); +- if (c) +- if (c == cap) +- (void)printf("true\n"); +- else { +- int l = (int)(c - cap); +- (void)printf("%*.*s\n", l, l, cap); +- } +- else +- (void)printf("%s\n", cap); +-} +- +-static void +-prettyprint(char *b) +-{ +-#define TERMWIDTH 65 +- int did = 0; +- size_t len; +- char *s, c; +- +- for (;;) { +- len = strlen(b); +- if (len <= TERMWIDTH) { +-done: +- if (did) +- printf("\t:"); +- printf("%s\n", b); +- return; +- } +- for (s = b + TERMWIDTH; s > b && *s != ':'; s--) +- continue; +- if (*s++ != ':') +- goto done; +- c = *s; +- *s = '\0'; +- if (did) +- printf("\t:"); +- did++; +- printf("%s\\\n", b); +- *s = c; +- b = s; +- } +-} +- +-static void +-handleone(const char * const *db_array, char *b, int recurse, int pretty, +- int level) +-{ +- char *tc; +- +- if (level && pretty) +- printf("\n"); +- if (pretty) +- prettyprint(b); +- else +- printf("%s\n", b); +- if (!recurse || cgetstr(b, "tc", &tc) <= 0) +- return; +- +- b = mygetent(db_array, tc); +- free(tc); +- +- if (b == NULL) +- return; +- +- handleone(db_array, b, recurse, pretty, ++level); +- free(b); +-} +- +-static int +-handlecap(const char *db, int argc, char *argv[]) +-{ +- static const char sfx[] = "=#:"; +- const char *db_array[] = { db, NULL }; +- char *b, *cap; +- int i, rv, c; +- size_t j; +- int expand = 1, recurse = 0, pretty = 0; +- +- assert(argc > 1); +- assert(argv != NULL); +- +- argc--; +- argv++; +- while ((c = getopt(argc, argv, "pnr")) != -1) +- switch (c) { +- case 'n': +- expand = 0; +- break; +- case 'r': +- expand = 0; +- recurse = 1; +- break; +- case 'p': +- pretty = 1; +- break; +- default: +- usage(); +- break; +- } +- +- argc -= optind; +- argv += optind; +- csetexpandtc(expand); +- rv = RV_OK; +- if (argc == 0) { +- for (b = mygetone(db_array, 1); b; b = mygetone(db_array, 0)) { +- handleone(db_array, b, recurse, pretty, 0); +- free(b); +- } +- } else { +- if ((b = mygetent(db_array, argv[0])) == NULL) +- return RV_NOTFOUND; +- if (argc == 1) +- handleone(db_array, b, recurse, pretty, 0); +- else { +- for (i = 2; i < argc; i++) { +- for (j = 0; j < sizeof(sfx) - 1; j++) { +- cap = cgetcap(b, argv[i], sfx[j]); +- if (cap) { +- capprint(cap); +- break; +- } +- } +- if (j == sizeof(sfx) - 1) +- printf("false\n"); +- } +- } +- free(b); +- } +- return rv; +-} +- +- /* +- * gettytab +- */ +- +-static int +-gettytab(int argc, char *argv[]) +-{ +- return handlecap(_PATH_GETTYTAB, argc, argv); +-} +- +- /* +- * printcap +- */ +- +-static int +-printcap(int argc, char *argv[]) +-{ +- return handlecap(_PATH_PRINTCAP, argc, argv); +-} +- +- /* +- * disktab +- */ +- +-static int +-disktab(int argc, char *argv[]) +-{ +- return handlecap(_PATH_DISKTAB, argc, argv); +-} +- + /* + * protocols + */ +@@ -726,47 +402,6 @@ + } + + /* +- * rpc +- */ +- +-static int +-rpc(int argc, char *argv[]) +-{ +- struct rpcent *re; +- unsigned long id; +- int i, rv; +- +- assert(argc > 1); +- assert(argv != NULL); +- +-#define RPCPRINT printfmtstrings(re->r_aliases, " ", " ", \ +- "%-16s %6d", \ +- re->r_name, re->r_number) +- +- setrpcent(1); +- rv = RV_OK; +- if (argc == 2) { +- while ((re = getrpcent()) != NULL) +- RPCPRINT; +- } else { +- for (i = 2; i < argc; i++) { +- if (parsenum(argv[i], &id)) +- re = getrpcbynumber((int)id); +- else +- re = getrpcbyname(argv[i]); +- if (re != NULL) +- RPCPRINT; +- else { +- rv = RV_NOTFOUND; +- break; +- } +- } +- } +- endrpcent(); +- return rv; +-} +- +- /* + * services + */ + diff --git a/pkgs/os-specific/bsd/openbsd/default.nix b/pkgs/os-specific/bsd/openbsd/default.nix new file mode 100644 index 000000000000..9ccc0adaa2df --- /dev/null +++ b/pkgs/os-specific/bsd/openbsd/default.nix @@ -0,0 +1,42 @@ +{ fetchcvs, netBSDDerivation, compat, libcurses, libressl }: + +let + fetchOpenBSD = path: version: sha256: fetchcvs { + cvsRoot = "anoncvs@anoncvs.ca.openbsd.org:/cvs"; + module = "src/${path}"; + inherit sha256; + tag = "OPENBSD_${builtins.replaceStrings ["."] ["_"] version}"; + }; + + # OpenBSD is a fork of NetBSD + # We can build it with minimal changes + openBSDDerivation = attrs: netBSDDerivation (attrs // { + name = "${attrs.pname or (baseNameOf attrs.path)}-openbsd-${attrs.version}"; + src = fetchOpenBSD attrs.path attrs.version attrs.sha256; + }); + +in { + + mg = openBSDDerivation { + path = "usr.bin/mg"; + version = "6.3"; + sha256 = "0n3hwa81c2mcjwbmidrbvi1l25jh8hy939kqrigbv78jixpynffc"; + buildInputs = [ compat libcurses ]; + patchPhase = '' + NIX_CFLAGS_COMPILE+=" -I$BSDSRCDIR/sys" + ''; + extraPaths = [ + (fetchOpenBSD "sys/sys/tree.h" "6.3" "0rimh41wn9wz5m510zk9i27z3s450qqgq2k5xn8kp3885hygbcj9") + (fetchOpenBSD "sys/sys/_null.h" "6.3" "0l2rgg9ai4ivfl07zmbqli19vnm3lj7qkxpikqplmzrfp36qpzgr") + ]; + }; + + nc = openBSDDerivation { + path = "usr.bin/nc"; + version = "6.3"; + sha256 = "0fmnh6ccxab0qvhmgspyd3wra1ps2516i0j6hwkvna2lcny20xvr"; + patches = [ ./nc.patch ]; + buildInputs = [ compat libressl ]; + }; + +} diff --git a/pkgs/os-specific/bsd/openbsd/nc.patch b/pkgs/os-specific/bsd/openbsd/nc.patch new file mode 100644 index 000000000000..de6fb2d04c41 --- /dev/null +++ b/pkgs/os-specific/bsd/openbsd/nc.patch @@ -0,0 +1,421 @@ +--- a/nc.1 ++++ b/nc.1 +@@ -204,9 +204,6 @@ Proxy authentication is only supported f + Specifies the source port + .Nm + should use, subject to privilege restrictions and availability. +-It is an error to use this option in conjunction with the +-.Fl l +-option. + .It Fl R Ar CAfile + Specifies the filename from which the root CA bundle for certificate + verification is loaded, in PEM format. +@@ -258,6 +255,7 @@ For IPv4 TOS value + may be one of + .Ar critical , + .Ar inetcontrol , ++.Ar lowcost , + .Ar lowdelay , + .Ar netcontrol , + .Ar throughput , +--- a/netcat.c ++++ b/netcat.c +@@ -32,6 +32,8 @@ + * *Hobbit* <hobbit@avian.org>. + */ + ++#define _GNU_SOURCE ++ + #include <sys/types.h> + #include <sys/socket.h> + #include <sys/uio.h> +@@ -41,6 +43,49 @@ + #include <netinet/tcp.h> + #include <netinet/ip.h> + #include <arpa/telnet.h> ++#ifdef __linux__ ++# include <linux/in6.h> ++#endif ++ ++#ifndef IPTOS_LOWDELAY ++# define IPTOS_LOWDELAY 0x10 ++# define IPTOS_THROUGHPUT 0x08 ++# define IPTOS_RELIABILITY 0x04 ++# define IPTOS_LOWCOST 0x02 ++# define IPTOS_MINCOST IPTOS_LOWCOST ++#endif /* IPTOS_LOWDELAY */ ++ ++# ifndef IPTOS_DSCP_AF11 ++# define IPTOS_DSCP_AF11 0x28 ++# define IPTOS_DSCP_AF12 0x30 ++# define IPTOS_DSCP_AF13 0x38 ++# define IPTOS_DSCP_AF21 0x48 ++# define IPTOS_DSCP_AF22 0x50 ++# define IPTOS_DSCP_AF23 0x58 ++# define IPTOS_DSCP_AF31 0x68 ++# define IPTOS_DSCP_AF32 0x70 ++# define IPTOS_DSCP_AF33 0x78 ++# define IPTOS_DSCP_AF41 0x88 ++# define IPTOS_DSCP_AF42 0x90 ++# define IPTOS_DSCP_AF43 0x98 ++# define IPTOS_DSCP_EF 0xb8 ++#endif /* IPTOS_DSCP_AF11 */ ++ ++#ifndef IPTOS_DSCP_CS0 ++# define IPTOS_DSCP_CS0 0x00 ++# define IPTOS_DSCP_CS1 0x20 ++# define IPTOS_DSCP_CS2 0x40 ++# define IPTOS_DSCP_CS3 0x60 ++# define IPTOS_DSCP_CS4 0x80 ++# define IPTOS_DSCP_CS5 0xa0 ++# define IPTOS_DSCP_CS6 0xc0 ++# define IPTOS_DSCP_CS7 0xe0 ++#endif /* IPTOS_DSCP_CS0 */ ++ ++#ifndef IPTOS_DSCP_EF ++# define IPTOS_DSCP_EF 0xb8 ++#endif /* IPTOS_DSCP_EF */ ++ + + #include <err.h> + #include <errno.h> +@@ -268,10 +315,14 @@ main(int argc, char *argv[]) + uflag = 1; + break; + case 'V': ++# if defined(RT_TABLEID_MAX) + rtableid = (int)strtonum(optarg, 0, + RT_TABLEID_MAX, &errstr); + if (errstr) + errx(1, "rtable %s: %s", errstr, optarg); ++# else ++ errx(1, "no alternate routing table support available"); ++# endif + break; + case 'v': + vflag = 1; +@@ -320,7 +371,11 @@ main(int argc, char *argv[]) + oflag = optarg; + break; + case 'S': ++# if defined(TCP_MD5SIG) + Sflag = 1; ++# else ++ errx(1, "no TCP MD5 signature support available"); ++# endif + break; + case 'T': + errstr = NULL; +@@ -345,35 +400,23 @@ main(int argc, char *argv[]) + argc -= optind; + argv += optind; + ++# if defined(RT_TABLEID_MAX) + if (rtableid >= 0) + if (setrtable(rtableid) == -1) + err(1, "setrtable"); +- +- if (family == AF_UNIX) { +- if (pledge("stdio rpath wpath cpath tmppath unix", NULL) == -1) +- err(1, "pledge"); +- } else if (Fflag && Pflag) { +- if (pledge("stdio inet dns sendfd tty", NULL) == -1) +- err(1, "pledge"); +- } else if (Fflag) { +- if (pledge("stdio inet dns sendfd", NULL) == -1) +- err(1, "pledge"); +- } else if (Pflag && usetls) { +- if (pledge("stdio rpath inet dns tty", NULL) == -1) +- err(1, "pledge"); +- } else if (Pflag) { +- if (pledge("stdio inet dns tty", NULL) == -1) +- err(1, "pledge"); +- } else if (usetls) { +- if (pledge("stdio rpath inet dns", NULL) == -1) +- err(1, "pledge"); +- } else if (pledge("stdio inet dns", NULL) == -1) +- err(1, "pledge"); ++# endif + + /* Cruft to make sure options are clean, and used properly. */ + if (argv[0] && !argv[1] && family == AF_UNIX) { + host = argv[0]; + uport = NULL; ++ } else if (!argv[0] && lflag) { ++ if (sflag) ++ errx(1, "cannot use -s and -l"); ++ if (pflag) ++ errx(1, "cannot use -p and -l"); ++ if (zflag) ++ errx(1, "cannot use -z and -l"); + } else if (argv[0] && !argv[1]) { + if (!lflag) + usage(1); +@@ -385,12 +428,6 @@ main(int argc, char *argv[]) + } else + usage(1); + +- if (lflag && sflag) +- errx(1, "cannot use -s and -l"); +- if (lflag && pflag) +- errx(1, "cannot use -p and -l"); +- if (lflag && zflag) +- errx(1, "cannot use -z and -l"); + if (!lflag && kflag) + errx(1, "must use -l with -k"); + if (uflag && usetls) +@@ -425,8 +462,8 @@ main(int argc, char *argv[]) + } else { + strlcpy(unix_dg_tmp_socket_buf, "/tmp/nc.XXXXXXXXXX", + UNIX_DG_TMP_SOCKET_SIZE); +- if (mktemp(unix_dg_tmp_socket_buf) == NULL) +- err(1, "mktemp"); ++ if (mkstemp(unix_dg_tmp_socket_buf) == -1) ++ err(1, "mkstemp"); + unix_dg_tmp_socket = unix_dg_tmp_socket_buf; + } + } +@@ -901,8 +938,10 @@ remote_connect(const char *host, const c + if (sflag || pflag) { + struct addrinfo ahints, *ares; + ++# if defined (SO_BINDANY) + /* try SO_BINDANY, but don't insist */ + setsockopt(s, SOL_SOCKET, SO_BINDANY, &on, sizeof(on)); ++# endif + memset(&ahints, 0, sizeof(struct addrinfo)); + ahints.ai_family = res->ai_family; + ahints.ai_socktype = uflag ? SOCK_DGRAM : SOCK_STREAM; +@@ -994,9 +1033,15 @@ local_listen(char *host, char *port, str + res->ai_protocol)) < 0) + continue; + ++ ret = setsockopt(s, SOL_SOCKET, SO_REUSEADDR, &x, sizeof(x)); ++ if (ret == -1) ++ err(1, NULL); ++ ++# if defined(SO_REUSEPORT) + ret = setsockopt(s, SOL_SOCKET, SO_REUSEPORT, &x, sizeof(x)); + if (ret == -1) + err(1, NULL); ++# endif + + set_common_sockopts(s, res->ai_family); + +@@ -1452,11 +1497,13 @@ set_common_sockopts(int s, int af) + { + int x = 1; + ++# if defined(TCP_MD5SIG) + if (Sflag) { + if (setsockopt(s, IPPROTO_TCP, TCP_MD5SIG, + &x, sizeof(x)) == -1) + err(1, NULL); + } ++# endif + if (Dflag) { + if (setsockopt(s, SOL_SOCKET, SO_DEBUG, + &x, sizeof(x)) == -1) +@@ -1467,9 +1514,14 @@ set_common_sockopts(int s, int af) + IP_TOS, &Tflag, sizeof(Tflag)) == -1) + err(1, "set IP ToS"); + ++#if defined(IPV6_TCLASS) + else if (af == AF_INET6 && setsockopt(s, IPPROTO_IPV6, + IPV6_TCLASS, &Tflag, sizeof(Tflag)) == -1) + err(1, "set IPv6 traffic class"); ++#else ++ else if (af == AF_INET6) ++ errx(1, "can't set IPv6 traffic class (unavailable)"); ++#endif + } + if (Iflag) { + if (setsockopt(s, SOL_SOCKET, SO_RCVBUF, +@@ -1487,19 +1539,34 @@ set_common_sockopts(int s, int af) + IP_TTL, &ttl, sizeof(ttl))) + err(1, "set IP TTL"); + ++#if defined(IPV6_UNICAST_HOPS) + else if (af == AF_INET6 && setsockopt(s, IPPROTO_IPV6, + IPV6_UNICAST_HOPS, &ttl, sizeof(ttl))) + err(1, "set IPv6 unicast hops"); ++#else ++ else if (af == AF_INET6) ++ errx(1, "can't set IPv6 unicast hops (unavailable)"); ++#endif + } + + if (minttl != -1) { ++#if defined(IP_MINTTL) + if (af == AF_INET && setsockopt(s, IPPROTO_IP, + IP_MINTTL, &minttl, sizeof(minttl))) + err(1, "set IP min TTL"); ++#else ++ if (af == AF_INET) ++ errx(1, "can't set IP min TTL (unavailable)"); ++#endif + ++#if defined(IPV6_MINHOPCOUNT) + else if (af == AF_INET6 && setsockopt(s, IPPROTO_IPV6, + IPV6_MINHOPCOUNT, &minttl, sizeof(minttl))) + err(1, "set IPv6 min hop count"); ++#else ++ else if (af == AF_INET6) ++ errx(1, "can't set IPv6 min hop count (unavailable)"); ++#endif + } + } + +@@ -1534,6 +1601,7 @@ process_tos_opt(char *s, int *val) + { "cs7", IPTOS_DSCP_CS7 }, + { "ef", IPTOS_DSCP_EF }, + { "inetcontrol", IPTOS_PREC_INTERNETCONTROL }, ++ { "lowcost", IPTOS_LOWCOST }, + { "lowdelay", IPTOS_LOWDELAY }, + { "netcontrol", IPTOS_PREC_NETCONTROL }, + { "reliability", IPTOS_RELIABILITY }, +@@ -1741,7 +1812,7 @@ help(void) + \t-Z Peer certificate file\n\ + \t-z Zero-I/O mode [used for scanning]\n\ + Port numbers can be individual or ranges: lo-hi [inclusive]\n"); +- exit(1); ++ exit(0); + } + + void +--- a/socks.c ++++ b/socks.c +@@ -219,11 +219,11 @@ socks_connect(const char *host, const ch + buf[2] = SOCKS_NOAUTH; + cnt = atomicio(vwrite, proxyfd, buf, 3); + if (cnt != 3) +- err(1, "write failed (%zu/3)", cnt); ++ err(1, "write failed (%zu/3)", (size_t)cnt); + + cnt = atomicio(read, proxyfd, buf, 2); + if (cnt != 2) +- err(1, "read failed (%zu/3)", cnt); ++ err(1, "read failed (%zu/3)", (size_t)cnt); + + if (buf[1] == SOCKS_NOMETHOD) + errx(1, "authentication method negotiation failed"); +@@ -272,11 +272,11 @@ socks_connect(const char *host, const ch + + cnt = atomicio(vwrite, proxyfd, buf, wlen); + if (cnt != wlen) +- err(1, "write failed (%zu/%zu)", cnt, wlen); ++ err(1, "write failed (%zu/%zu)", (size_t)cnt, (size_t)wlen); + + cnt = atomicio(read, proxyfd, buf, 4); + if (cnt != 4) +- err(1, "read failed (%zu/4)", cnt); ++ err(1, "read failed (%zu/4)", (size_t)cnt); + if (buf[1] != 0) { + errx(1, "connection failed, SOCKSv5 error: %s", + socks5_strerror(buf[1])); +@@ -285,12 +285,12 @@ socks_connect(const char *host, const ch + case SOCKS_IPV4: + cnt = atomicio(read, proxyfd, buf + 4, 6); + if (cnt != 6) +- err(1, "read failed (%zu/6)", cnt); ++ err(1, "read failed (%zu/6)", (size_t)cnt); + break; + case SOCKS_IPV6: + cnt = atomicio(read, proxyfd, buf + 4, 18); + if (cnt != 18) +- err(1, "read failed (%zu/18)", cnt); ++ err(1, "read failed (%zu/18)", (size_t)cnt); + break; + default: + errx(1, "connection failed, unsupported address type"); +@@ -310,11 +310,11 @@ socks_connect(const char *host, const ch + + cnt = atomicio(vwrite, proxyfd, buf, wlen); + if (cnt != wlen) +- err(1, "write failed (%zu/%zu)", cnt, wlen); ++ err(1, "write failed (%zu/%zu)", (size_t)cnt, (size_t)wlen); + + cnt = atomicio(read, proxyfd, buf, 8); + if (cnt != 8) +- err(1, "read failed (%zu/8)", cnt); ++ err(1, "read failed (%zu/8)", (size_t)cnt); + if (buf[1] != 90) { + errx(1, "connection failed, SOCKSv4 error: %s", + socks4_strerror(buf[1])); +@@ -328,39 +328,39 @@ socks_connect(const char *host, const ch + + /* Try to be sane about numeric IPv6 addresses */ + if (strchr(host, ':') != NULL) { +- r = snprintf(buf, sizeof(buf), ++ r = snprintf((char*)buf, sizeof(buf), + "CONNECT [%s]:%d HTTP/1.0\r\n", + host, ntohs(serverport)); + } else { +- r = snprintf(buf, sizeof(buf), ++ r = snprintf((char*)buf, sizeof(buf), + "CONNECT %s:%d HTTP/1.0\r\n", + host, ntohs(serverport)); + } + if (r == -1 || (size_t)r >= sizeof(buf)) + errx(1, "hostname too long"); +- r = strlen(buf); ++ r = strlen((char*)buf); + + cnt = atomicio(vwrite, proxyfd, buf, r); + if (cnt != r) +- err(1, "write failed (%zu/%d)", cnt, r); ++ err(1, "write failed (%zu/%d)", (size_t)cnt, (int)r); + + if (authretry > 1) { + char resp[1024]; + + proxypass = getproxypass(proxyuser, proxyhost); +- r = snprintf(buf, sizeof(buf), "%s:%s", ++ r = snprintf((char*)buf, sizeof(buf), "%s:%s", + proxyuser, proxypass); + if (r == -1 || (size_t)r >= sizeof(buf) || +- b64_ntop(buf, strlen(buf), resp, ++ b64_ntop(buf, strlen((char*)buf), resp, + sizeof(resp)) == -1) + errx(1, "Proxy username/password too long"); +- r = snprintf(buf, sizeof(buf), "Proxy-Authorization: " ++ r = snprintf((char*)buf, sizeof(buf), "Proxy-Authorization: " + "Basic %s\r\n", resp); + if (r == -1 || (size_t)r >= sizeof(buf)) + errx(1, "Proxy auth response too long"); +- r = strlen(buf); ++ r = strlen((char*)buf); + if ((cnt = atomicio(vwrite, proxyfd, buf, r)) != r) +- err(1, "write failed (%zu/%d)", cnt, r); ++ err(1, "write failed (%zu/%d)", (size_t)cnt, r); + } + + /* Terminate headers */ +@@ -368,22 +368,22 @@ socks_connect(const char *host, const ch + err(1, "write failed (%zu/2)", cnt); + + /* Read status reply */ +- proxy_read_line(proxyfd, buf, sizeof(buf)); ++ proxy_read_line(proxyfd, (char*)buf, sizeof(buf)); + if (proxyuser != NULL && +- strncmp(buf, "HTTP/1.0 407 ", 12) == 0) { ++ strncmp((char*)buf, "HTTP/1.0 407 ", 12) == 0) { + if (authretry > 1) { + fprintf(stderr, "Proxy authentication " + "failed\n"); + } + close(proxyfd); + goto again; +- } else if (strncmp(buf, "HTTP/1.0 200 ", 12) != 0 && +- strncmp(buf, "HTTP/1.1 200 ", 12) != 0) ++ } else if (strncmp((char*)buf, "HTTP/1.0 200 ", 12) != 0 && ++ strncmp((char*)buf, "HTTP/1.1 200 ", 12) != 0) + errx(1, "Proxy error: \"%s\"", buf); + + /* Headers continue until we hit an empty line */ + for (r = 0; r < HTTP_MAXHDRS; r++) { +- proxy_read_line(proxyfd, buf, sizeof(buf)); ++ proxy_read_line(proxyfd, (char*)buf, sizeof(buf)); + if (*buf == '\0') + break; + } \ No newline at end of file diff --git a/pkgs/os-specific/darwin/apple-source-releases/adv_cmds/xcode.nix b/pkgs/os-specific/darwin/apple-source-releases/adv_cmds/xcode.nix index 1d5c0defcbfd..dcfb4aefe1f5 100644 --- a/pkgs/os-specific/darwin/apple-source-releases/adv_cmds/xcode.nix +++ b/pkgs/os-specific/darwin/apple-source-releases/adv_cmds/xcode.nix @@ -27,7 +27,7 @@ appleDerivation { | grep -v -e Desktop -e Embedded -e mklocale -e colldef) for i in $targets; do - xcodebuild -target $i + xcodebuild SYMROOT=$PWD/Products OBJROOT=$PWD/Intermediates -target $i done ''; diff --git a/pkgs/os-specific/darwin/apple-source-releases/default.nix b/pkgs/os-specific/darwin/apple-source-releases/default.nix index 5d4cd22363d6..3120d8ae3d10 100644 --- a/pkgs/os-specific/darwin/apple-source-releases/default.nix +++ b/pkgs/os-specific/darwin/apple-source-releases/default.nix @@ -46,6 +46,7 @@ let system_cmds = "550.6"; diskdev_cmds = "593"; top = "108"; + text_cmds = "99"; }; "osx-10.11.5" = { Libc = "1082.50.1"; # 10.11.6 still unreleased :/ @@ -250,6 +251,7 @@ let file_cmds = applePackage "file_cmds" "osx-10.11.6" "1zfxbmasps529pnfdjvc13p7ws2cfx8pidkplypkswyff0nff4wp" {}; shell_cmds = applePackage "shell_cmds" "osx-10.11.6" "0084k271v66h4jqp7q7rmjvv7w4mvhx3aq860qs8jbd30canm86n" {}; system_cmds = applePackage "system_cmds" "osx-10.11.6" "1h46j2c5v02pkv5d9fyv6cpgyg0lczvwicrx6r9s210cl03l77jl" {}; + text_cmds = applePackage "text_cmds" "osx-10.11.6" "1f93m7dd0ghqb2hwh905mjhzblyfr7dwffw98xhgmv1mfdnigxg0" {}; top = applePackage "top" "osx-10.11.6" "0i9120rfwapgwdvjbfg0ya143i29s1m8zbddsxh39pdc59xnsg5l" {}; security_systemkeychain = applePackage "security_systemkeychain" "osx-10.10.5" "0xviskdgxsail15npi0billyiysvljlmg38mmhnr7qi4ymnnjr90" {}; diff --git a/pkgs/os-specific/darwin/apple-source-releases/system_cmds/default.nix b/pkgs/os-specific/darwin/apple-source-releases/system_cmds/default.nix index 2579b0b6a0a6..1bbda6ab7add 100644 --- a/pkgs/os-specific/darwin/apple-source-releases/system_cmds/default.nix +++ b/pkgs/os-specific/darwin/apple-source-releases/system_cmds/default.nix @@ -11,7 +11,7 @@ appleDerivation rec { apple_sdk.frameworks.IOKit openbsm ]; # NIX_CFLAGS_COMPILE = lib.optionalString hostPlatform.isi686 "-D__i386__" # + lib.optionalString hostPlatform.isx86_64 "-D__x86_64__" - # + lib.optionalString hostPlatform.isArm "-D__arm__"; + # + lib.optionalString hostPlatform.isAarch32 "-D__arm__"; NIX_CFLAGS_COMPILE = [ "-DDAEMON_UID=1" "-DDAEMON_GID=1" "-DDEFAULT_AT_QUEUE=\'a\'" diff --git a/pkgs/os-specific/darwin/apple-source-releases/text_cmds/default.nix b/pkgs/os-specific/darwin/apple-source-releases/text_cmds/default.nix new file mode 100644 index 000000000000..196276b0b273 --- /dev/null +++ b/pkgs/os-specific/darwin/apple-source-releases/text_cmds/default.nix @@ -0,0 +1,25 @@ +{ stdenv, appleDerivation, fetchurl, xcbuild, ncurses, bzip2, zlib, lzma }: + +appleDerivation { + buildInputs = [ xcbuild ncurses bzip2 zlib lzma ]; + + # patches to use ncursees + # disables md5 + patchPhase = '' + substituteInPlace text_cmds.xcodeproj/project.pbxproj \ + --replace 'FC6C98FB149A94EB00DDCC47 /* libcurses.dylib */ = {isa = PBXFileReference; lastKnownFileType = "compiled.mach-o.dylib"; name = libcurses.dylib; path = /usr/lib/libcurses.dylib; sourceTree = "<absolute>"; };' 'FC6C98FB149A94EB00DDCC47 /* libncurses.dylib */ = {isa = PBXFileReference; lastKnownFileType = "compiled.mach-o.dylib"; name = libncurses.dylib; path = /usr/lib/libncurses.dylib; sourceTree = "<absolute>"; };' \ + --replace 'FC7A7EB5149875E00086576A /* PBXTargetDependency */,' "" + ''; + + installPhase = '' + mkdir -p $out/bin + for f in Products/Release/*; do + install -D $f $out/bin/$(basename $f) + done + ''; + + meta = { + platforms = stdenv.lib.platforms.darwin; + maintainers = with stdenv.lib.maintainers; [ matthewbauer ]; + }; +} diff --git a/pkgs/os-specific/darwin/cctools/ld-tbd-v2.patch b/pkgs/os-specific/darwin/cctools/ld-tbd-v2.patch new file mode 100644 index 000000000000..9aae2be1d033 --- /dev/null +++ b/pkgs/os-specific/darwin/cctools/ld-tbd-v2.patch @@ -0,0 +1,98 @@ +diff --git a/cctools/ld64/src/ld/parsers/textstub_dylib_file.cpp b/cctools/ld64/src/ld/parsers/textstub_dylib_file.cpp +index 09c0e12..ac6b085 100644 +--- a/cctools/ld64/src/ld/parsers/textstub_dylib_file.cpp ++++ b/cctools/ld64/src/ld/parsers/textstub_dylib_file.cpp +@@ -187,6 +187,7 @@ struct DynamicLibrary { + ld::File::ObjcConstraint _objcConstraint; + Options::Platform _platform; + std::vector<Token> _allowedClients; ++ std::vector<Token> _allowableClients; + std::vector<Token> _reexportedLibraries; + std::vector<Token> _symbols; + std::vector<Token> _classes; +@@ -246,6 +247,14 @@ class TBDFile { + }); + } + ++ void parseAllowableClients(DynamicLibrary& lib) { ++ if ( !hasOptionalToken("allowable-clients") ) ++ return; ++ parseFlowSequence([&](Token name) { ++ lib._allowableClients.emplace_back(name); ++ }); ++ } ++ + void parseReexportedDylibs(DynamicLibrary& lib) { + if ( !hasOptionalToken("re-exports") ) + return; +@@ -306,6 +315,21 @@ class TBDFile { + return false; + } + ++ void skipUUIDs(DynamicLibrary& lib) { ++ expectToken("uuids"); ++ while ( true ) { ++ auto token = next(); ++ if ( token == "]" ) ++ break; ++ } ++ } ++ ++ void skipParentUmbrella(DynamicLibrary& lib) { ++ if (!hasOptionalToken("parent-umbrella")) ++ return; ++ next(); ++ } ++ + void parsePlatform(DynamicLibrary& lib) { + expectToken("platform"); + +@@ -410,6 +434,7 @@ class TBDFile { + } + + parseAllowedClients(lib); ++ parseAllowableClients(lib); + parseReexportedDylibs(lib); + parseSymbols(lib); + if ( !hasOptionalToken("-") ) +@@ -455,17 +480,21 @@ class TBDFile { + return result.front(); + } + +- void parseDocument(DynamicLibrary& lib, std::string &requestedArchName) { ++ void parseDocument(DynamicLibrary& lib, std::string &requestedArchName, bool isTbdV2) { + auto selectedArchName = parseAndSelectArchitecture(requestedArchName); + if (selectedArchName.empty()) + throwf("invalid arch"); + ++ if(isTbdV2) ++ skipUUIDs(lib); + parsePlatform(lib); + parseInstallName(lib); + parseCurrentVersion(lib); + parseCompatibilityVersion(lib); + parseSwiftVersion(lib); + parseObjCConstraint(lib); ++ if(isTbdV2) ++ skipParentUmbrella(lib); + parseExportsBlock(lib, selectedArchName); + } + +@@ -476,7 +505,8 @@ public: + _tokenizer.reset(); + DynamicLibrary lib; + expectToken("---"); +- parseDocument(lib, requestedArchName); ++ auto isTbdV2 = hasOptionalToken("!tapi-tbd-v2"); ++ parseDocument(lib, requestedArchName, isTbdV2); + expectToken("..."); + return lib; + } +@@ -486,6 +516,7 @@ public: + auto token = next(); + if ( token != "---" ) + return false; ++ hasOptionalToken("!tapi-tbd-v2"); + return !parseAndSelectArchitecture(requestedArchName).empty(); + } + diff --git a/pkgs/os-specific/darwin/cctools/port.nix b/pkgs/os-specific/darwin/cctools/port.nix index bcca11d66b19..d8abdc2c6f84 100644 --- a/pkgs/os-specific/darwin/cctools/port.nix +++ b/pkgs/os-specific/darwin/cctools/port.nix @@ -1,10 +1,19 @@ -{ stdenv, fetchFromGitHub, makeWrapper, autoconf, automake, libtool_2 +{ stdenv, fetchFromGitHub, makeWrapper, autoconf, automake, libtool_2, autoreconfHook , llvm, libcxx, libcxxabi, clang, libuuid , libobjc ? null, maloader ? null, xctoolchain ? null , hostPlatform, targetPlatform +, enableDumpNormalizedLibArgs ? false }: let + + # We need to use an old version of cctools-port to support linking TBD files + # in the iOS SDK. Note that this only provides support for SDK versions up to + # 10.x. For 11.0 and higher we will need to upgrade to a newer cctools than the + # default version here, which can support the new TBD format via Apple's + # libtapi. + useOld = targetPlatform.isiOS; + # The targetPrefix prepended to binary names to allow multiple binuntils on the # PATH to both be usable. targetPrefix = stdenv.lib.optionalString @@ -12,26 +21,41 @@ let "${targetPlatform.config}-"; in -assert targetPlatform.isDarwin; - # Non-Darwin alternatives assert (!hostPlatform.isDarwin) -> (maloader != null && xctoolchain != null); +assert enableDumpNormalizedLibArgs -> (!useOld); + let baseParams = rec { name = "${targetPrefix}cctools-port-${version}"; - version = "895"; + version = if useOld then "886" else "895"; - src = fetchFromGitHub { + src = fetchFromGitHub (if enableDumpNormalizedLibArgs then { + owner = "tpoechtrager"; + repo = "cctools-port"; + # master with https://github.com/tpoechtrager/cctools-port/pull/34 + rev = "8395d4b2c3350356e2fb02f5e04f4f463c7388df"; + sha256 = "10vbf1cfzx02q8chc77s84fp2kydjpx2y682mr6mrbb7sq5rwh8f"; + } else if useOld then { + owner = "tpoechtrager"; + repo = "cctools-port"; + rev = "02f0b8ecd87a3951653d838a321ae744815e21a5"; + sha256 = "0bzyabzr5dvbxglr74d0kbrk2ij5x7s5qcamqi1v546q1had1wz1"; + } else { owner = "tpoechtrager"; repo = "cctools-port"; rev = "2e569d765440b8cd6414a695637617521aa2375b"; # From branch 895-ld64-274.2 sha256 = "0l45mvyags56jfi24rawms8j2ihbc45mq7v13pkrrwppghqrdn52"; - }; + }); outputs = [ "out" "dev" ]; - nativeBuildInputs = [ autoconf automake libtool_2 ]; + nativeBuildInputs = [ + autoconf automake libtool_2 + ] ++ stdenv.lib.optionals useOld [ + autoreconfHook + ]; buildInputs = [ libuuid ] ++ # Only need llvm and clang if the stdenv isn't already clang-based (TODO: just make a stdenv.cc.isClang) stdenv.lib.optionals (!stdenv.isDarwin) [ llvm clang ] ++ @@ -39,9 +63,14 @@ let patches = [ ./ld-rpath-nonfinal.patch ./ld-ignore-rpath-link.patch + ] ++ stdenv.lib.optionals useOld [ + # See https://github.com/tpoechtrager/cctools-port/issues/24. Remove when that's fixed. + ./undo-unknown-triple.patch + ./ld-tbd-v2.patch + ./support-ios.patch ]; - __propagatedImpureHostDeps = [ + __propagatedImpureHostDeps = stdenv.lib.optionals (!useOld) [ # As far as I can tell, otool from cctools is the only thing that depends on these two, and we should fix them "/usr/lib/libobjc.A.dylib" "/usr/lib/libobjc.dylib" @@ -81,12 +110,15 @@ let EOF '' + stdenv.lib.optionalString (!stdenv.isDarwin) '' sed -i -e 's|clang++|& -I${libcxx}/include/c++/v1|' cctools/autogen.sh + '' + stdenv.lib.optionalString useOld '' + cd cctools ''; # TODO: this builds an ld without support for LLVM's LTO. We need to teach it, but that's rather # hairy to handle during bootstrap. Perhaps it could be optional? - preConfigure = '' + preConfigure = stdenv.lib.optionalString (!useOld) '' cd cctools + '' + '' sh autogen.sh ''; @@ -117,6 +149,7 @@ let }; meta = { + broken = !targetPlatform.isDarwin; # Only supports darwin targets homepage = http://www.opensource.apple.com/source/cctools/; description = "MacOS Compiler Tools (cross-platform port)"; license = stdenv.lib.licenses.apsl20; diff --git a/pkgs/os-specific/darwin/cctools/support-ios.patch b/pkgs/os-specific/darwin/cctools/support-ios.patch new file mode 100644 index 000000000000..f78c6b63ac80 --- /dev/null +++ b/pkgs/os-specific/darwin/cctools/support-ios.patch @@ -0,0 +1,13 @@ +diff --git a/cctools/configure.ac b/cctools/configure.ac +index 56e8f24..0b4b3ff 100644 +--- a/cctools/configure.ac ++++ b/cctools/configure.ac +@@ -39,7 +39,7 @@ EXTRACXXFLAGS="" + WARNINGS="" + + case $host_os in +- darwin* ) ++ darwin* | ios*) + isdarwin=yes + AM_CONDITIONAL([ISDARWIN], [true]) + ;; diff --git a/pkgs/os-specific/darwin/cctools/undo-unknown-triple.patch b/pkgs/os-specific/darwin/cctools/undo-unknown-triple.patch new file mode 100644 index 000000000000..7df9bdd16dab --- /dev/null +++ b/pkgs/os-specific/darwin/cctools/undo-unknown-triple.patch @@ -0,0 +1,17 @@ +diff --git a/cctools/as/driver.c b/cctools/as/driver.c +index b06d085..c03397a 100644 +--- a/cctools/as/driver.c ++++ b/cctools/as/driver.c +@@ -363,12 +363,6 @@ char **envp) + /* Add -c or clang will run ld(1). */ + new_argv[j] = "-c"; + j++; +- /* cctools-port start */ +- new_argv[j] = "-target"; +- j++; +- new_argv[j] = "unknown-apple-darwin"; +- j++; +- /* cctools-port end */ + new_argv[j] = NULL; + if(execute(new_argv, verbose)) + exit(0); diff --git a/pkgs/os-specific/darwin/darling/default.nix b/pkgs/os-specific/darwin/darling/default.nix index 8c94b2d878dd..b9d806cded23 100644 --- a/pkgs/os-specific/darwin/darling/default.nix +++ b/pkgs/os-specific/darwin/darling/default.nix @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { repo = pname; owner = "darlinghq"; rev = "d2cc5fa748003aaa70ad4180fff0a9a85dc65e9b"; - sha256 = "1mkcnzy1cfpwghgvb9pszhy9jy6534y8krw8inwl9fqfd0w019wz"; + sha256 = "1sdl0ysa3yfdvkq0x7vkdl64g7mcfy3qx70saf1d8rnhycbxjgjg"; }; # only packaging sandbox for now @@ -29,6 +29,6 @@ stdenv.mkDerivation rec { maintainers = with maintainers; [ matthewbauer ]; license = licenses.gpl3; description = "Darwin/macOS emulation layer for Linux"; - platforms = platforms.unix; + platforms = platforms.darwin; }; } diff --git a/pkgs/os-specific/darwin/ios-cross/default.nix b/pkgs/os-specific/darwin/ios-cross/default.nix deleted file mode 100644 index 175e9738ef9e..000000000000 --- a/pkgs/os-specific/darwin/ios-cross/default.nix +++ /dev/null @@ -1,61 +0,0 @@ -{ runCommand -, lib -, llvm -, clang -, binutils -, stdenv -, coreutils -, gnugrep -, buildPackages -, hostPlatform -, targetPlatform -}: - -/* As of this writing, known-good prefix/arch/simulator triples: - * aarch64-apple-darwin14 | arm64 | false - * arm-apple-darwin10 | armv7 | false - * i386-apple-darwin11 | i386 | true - * x86_64-apple-darwin14 | x86_64 | true - */ - -# Apple uses somewhat non-standard names for this. We could fall back on -# `targetPlatform.parsed.cpu.name`, but that would be a more standard one and -# likely to fail. Better just to require something manual. -assert targetPlatform ? arch; - -let - - prefix = targetPlatform.config; - inherit (targetPlatform) arch; - simulator = targetPlatform.isiPhoneSimulator or false; - - sdkType = if simulator then "Simulator" else "OS"; - - sdkVer = "10.2"; - - sdk = "/Applications/Xcode.app/Contents/Developer/Platforms/iPhone${sdkType}.platform/Developer/SDKs/iPhone${sdkType}${sdkVer}.sdk"; - -in (import ../../../build-support/cc-wrapper { - inherit stdenv coreutils gnugrep runCommand buildPackages; - nativeTools = false; - nativeLibc = false; - inherit binutils; - libc = runCommand "empty-libc" {} "mkdir -p $out/{lib,include}"; - inherit (clang) cc; - inherit hostPlatform targetPlatform; - extraBuildCommands = '' - if ! [ -d ${sdk} ]; then - echo "You must have ${sdkVer} of the iPhone${sdkType} sdk installed at ${sdk}" >&2 - exit 1 - fi - # ugh - tr '\n' ' ' < $out/nix-support/cc-cflags > cc-cflags.tmp - mv cc-cflags.tmp $out/nix-support/cc-cflags - echo "-target ${prefix} -arch ${arch} -idirafter ${sdk}/usr/include ${if simulator then "-mios-simulator-version-min=7.0" else "-miphoneos-version-min=7.0"}" >> $out/nix-support/cc-cflags - - # Purposefully overwrite libc-ldflags-before, cctools ld doesn't know dynamic-linker and cc-wrapper doesn't do cross-compilation well enough to adjust - echo "-arch ${arch} -L${sdk}/usr/lib ${lib.optionalString simulator "-L${sdk}/usr/lib/system "}-i${if simulator then "os_simulator" else "phoneos"}_version_min 7.0.0" > $out/nix-support/libc-ldflags-before - ''; - }) // { - inherit sdkType sdkVer sdk; - } diff --git a/pkgs/os-specific/darwin/ios-sdk-pkgs/default.nix b/pkgs/os-specific/darwin/ios-sdk-pkgs/default.nix new file mode 100644 index 000000000000..5b9f30b62c39 --- /dev/null +++ b/pkgs/os-specific/darwin/ios-sdk-pkgs/default.nix @@ -0,0 +1,68 @@ +{ lib, hostPlatform, targetPlatform +, clang-unwrapped +, binutils-unwrapped +, runCommand +, stdenv +, wrapBintoolsWith +, wrapCCWith +, buildIosSdk, targetIosSdkPkgs +}: + +let + +minSdkVersion = "9.0"; + +iosPlatformArch = { parsed, ... }: { + "arm" = "armv7"; + "aarch64" = "arm64"; + "x86_64" = "x86_64"; +}.${parsed.cpu.name}; + +in + +rec { + # TODO(kmicklas): Make a pure version of this for each supported SDK version. + sdk = rec { + name = "ios-sdk"; + type = "derivation"; + outPath = "/Applications/Xcode.app/Contents/Developer/Platforms/iPhone${sdkType}.platform/Developer/SDKs/iPhone${sdkType}${version}.sdk"; + + sdkType = if targetPlatform.isiPhoneSimulator then "Simulator" else "OS"; + version = targetPlatform.sdkVer; + }; + + binutils = wrapBintoolsWith { + libc = targetIosSdkPkgs.libraries; + bintools = binutils-unwrapped; + extraBuildCommands = '' + echo "-arch ${iosPlatformArch targetPlatform}" >> $out/nix-support/libc-ldflags + ''; + }; + + clang = (wrapCCWith { + cc = clang-unwrapped; + bintools = binutils; + libc = targetIosSdkPkgs.libraries; + extraBuildCommands = '' + tr '\n' ' ' < $out/nix-support/cc-cflags > cc-cflags.tmp + mv cc-cflags.tmp $out/nix-support/cc-cflags + echo "-target ${targetPlatform.config} -arch ${iosPlatformArch targetPlatform}" >> $out/nix-support/cc-cflags + echo "-isystem ${sdk}/usr/include -isystem ${sdk}/usr/include/c++/4.2.1/ -stdlib=libstdc++" >> $out/nix-support/cc-cflags + echo "${if targetPlatform.isiPhoneSimulator then "-mios-simulator-version-min" else "-miphoneos-version-min"}=${minSdkVersion}" >> $out/nix-support/cc-cflags + ''; + }) // { + inherit sdk; + }; + + libraries = let sdk = buildIosSdk; in runCommand "libSystem-prebuilt" { + passthru = { + inherit sdk; + }; + } '' + if ! [ -d ${sdk} ]; then + echo "You must have version ${sdk.version} of the iPhone${sdk.sdkType} sdk installed at ${sdk}" >&2 + exit 1 + fi + ln -s ${sdk}/usr $out + ''; +} diff --git a/pkgs/os-specific/darwin/maloader/default.nix b/pkgs/os-specific/darwin/maloader/default.nix index 5f4306ec0c12..133266ec95aa 100644 --- a/pkgs/os-specific/darwin/maloader/default.nix +++ b/pkgs/os-specific/darwin/maloader/default.nix @@ -32,5 +32,6 @@ stdenv.mkDerivation { description = "Mach-O loader for Linux"; homepage = https://github.com/shinh/maloader; license = stdenv.lib.licenses.bsd2; + platforms = stdenv.lib.platforms.linux; }; } diff --git a/pkgs/os-specific/linux/acpid/default.nix b/pkgs/os-specific/linux/acpid/default.nix index c209cf6e3162..7a234b16c913 100644 --- a/pkgs/os-specific/linux/acpid/default.nix +++ b/pkgs/os-specific/linux/acpid/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl }: stdenv.mkDerivation rec { - name = "acpid-2.0.28"; + name = "acpid-2.0.29"; src = fetchurl { url = "mirror://sourceforge/acpid2/${name}.tar.xz"; - sha256 = "043igasvp1l6nv5rzh4sksmymay2qn20anl4zm4zvwnkn1a3l34q"; + sha256 = "1zq38al07z92r2md18zivrzgjqnn7m2wahdpgri6wijwjwkknl2q"; }; meta = with stdenv.lib; { diff --git a/pkgs/os-specific/linux/alsa-oss/default.nix b/pkgs/os-specific/linux/alsa-oss/default.nix index 0d02daebe1d7..5cd937a37928 100644 --- a/pkgs/os-specific/linux/alsa-oss/default.nix +++ b/pkgs/os-specific/linux/alsa-oss/default.nix @@ -1,14 +1,14 @@ {stdenv, fetchurl, alsaLib, gettext, ncurses, libsamplerate}: stdenv.mkDerivation rec { - name = "alsa-oss-1.0.28"; + name = "alsa-oss-1.1.6"; src = fetchurl { urls = [ "ftp://ftp.alsa-project.org/pub/oss-lib/${name}.tar.bz2" "http://alsa.cybermirror.org/oss-lib/${name}.tar.bz2" ]; - sha256 = "1mbabiywxjjlvdh257j3a0v4vvy69mwwnvc3xlq7pg50i2m2rris"; + sha256 = "1sj512wyci5qv8cisps96xngh7y9r5mv18ybqnazy18zwr1zgly3"; }; buildInputs = [ alsaLib ncurses libsamplerate ]; diff --git a/pkgs/os-specific/linux/alsa-plugins/default.nix b/pkgs/os-specific/linux/alsa-plugins/default.nix index dc11d21ff1cb..f57f84b293b5 100644 --- a/pkgs/os-specific/linux/alsa-plugins/default.nix +++ b/pkgs/os-specific/linux/alsa-plugins/default.nix @@ -1,14 +1,14 @@ { stdenv, fetchurl, lib, pkgconfig, alsaLib, libogg, libpulseaudio ? null, libjack2 ? null }: stdenv.mkDerivation rec { - name = "alsa-plugins-1.1.5"; + name = "alsa-plugins-1.1.6"; src = fetchurl { urls = [ "ftp://ftp.alsa-project.org/pub/plugins/${name}.tar.bz2" "http://alsa.cybermirror.org/plugins/${name}.tar.bz2" ]; - sha256 = "073zpgvj4pldmzqq97l40wngvbqnvrkc8yw153mgny9kypwaazbr"; + sha256 = "04qcwkisbh0d6lnh0rw1k6n869fbs6zbfq6yvb41rymiwgmk27bg"; }; # ToDo: a52, etc.? diff --git a/pkgs/os-specific/linux/alsa-tools/default.nix b/pkgs/os-specific/linux/alsa-tools/default.nix index d1cae06d7fff..67cae46164fc 100644 --- a/pkgs/os-specific/linux/alsa-tools/default.nix +++ b/pkgs/os-specific/linux/alsa-tools/default.nix @@ -4,14 +4,14 @@ stdenv.mkDerivation rec { name = "alsa-tools-${version}"; - version = "1.1.5"; + version = "1.1.6"; src = fetchurl { urls = [ "ftp://ftp.alsa-project.org/pub/tools/${name}.tar.bz2" "http://alsa.cybermirror.org/tools/${name}.tar.bz2" ]; - sha256 = "0d6m5dm5yskfr6q42cv1ihp5lfgv4a67nj39gpp26ll3vrknag5w"; + sha256 = "09rjb6hw1mn9y1jfdfj5djncgc2cr5wfps83k56rf6k4zg14v76n"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/os-specific/linux/bluez/bluez5_28.nix b/pkgs/os-specific/linux/bluez/bluez5_28.nix deleted file mode 100644 index 11aee0d88f2c..000000000000 --- a/pkgs/os-specific/linux/bluez/bluez5_28.nix +++ /dev/null @@ -1,82 +0,0 @@ -{ stdenv, fetchurl, pkgconfig, dbus, glib, alsaLib, - pythonPackages, readline, libsndfile, udev, libical, - systemd, enableWiimote ? false }: - -assert stdenv.isLinux; - -let - inherit (pythonPackages) python; -in stdenv.mkDerivation rec { - name = "bluez-5.28"; - - src = fetchurl { - url = "mirror://kernel/linux/bluetooth/${name}.tar.xz"; - sha256 = "1a8qzh38wpq5c0rydpx9isf0jc6g14g2qs18j1rmi8a79f7v9fl5"; - }; - - pythonPath = with pythonPackages; - [ dbus pygobject2 pygobject3 recursivePthLoader ]; - - buildInputs = - [ pkgconfig dbus glib alsaLib python pythonPackages.wrapPython - readline libsndfile udev libical - # Disables GStreamer; not clear what it gains us other than a - # zillion extra dependencies. - # gstreamer gst-plugins-base - ]; - - preConfigure = '' - substituteInPlace tools/hid2hci.rules --replace /sbin/udevadm ${systemd}/bin/udevadm - substituteInPlace tools/hid2hci.rules --replace "hid2hci " "$out/lib/udev/hid2hci " - ''; - - configureFlags = [ - "--localstatedir=/var" - "--enable-library" - "--enable-cups" - "--with-dbusconfdir=$(out)/etc" - "--with-dbussystembusdir=$(out)/share/dbus-1/system-services" - "--with-dbussessionbusdir=$(out)/share/dbus-1/services" - "--with-systemdsystemunitdir=$(out)/etc/systemd/system" - "--with-systemduserunitdir=$(out)/etc/systemd/user" - "--with-udevdir=$(out)/lib/udev" - ] ++ - stdenv.lib.optional enableWiimote [ "--enable-wiimote" ]; - - # Work around `make install' trying to create /var/lib/bluetooth. - installFlags = "statedir=$(TMPDIR)/var/lib/bluetooth"; - - makeFlags = "rulesdir=$(out)/lib/udev/rules.d"; - - # FIXME: Move these into a separate package to prevent Bluez from - # depending on Python etc. - postInstall = '' - mkdir $out/test - cp -a test $out - pushd $out/test - for a in \ - simple-agent \ - test-adapter \ - test-device \ - test-thermometer \ - list-devices \ - monitor-bluetooth \ - ; do - ln -s ../test/$a $out/bin/bluez-$a - done - popd - wrapPythonProgramsIn $out/test "$out/test $pythonPath" - - # for bluez4 compatibility for NixOS - mkdir $out/sbin - ln -s ../libexec/bluetooth/bluetoothd $out/sbin/bluetoothd - ln -s ../libexec/bluetooth/obexd $out/sbin/obexd - ''; - - meta = with stdenv.lib; { - homepage = http://www.bluez.org/; - repositories.git = https://git.kernel.org/pub/scm/bluetooth/bluez.git; - description = "Bluetooth support for Linux"; - platforms = platforms.linux; - }; -} diff --git a/pkgs/os-specific/linux/bluez/default.nix b/pkgs/os-specific/linux/bluez/default.nix index a0c240dfd46c..d4595d73d942 100644 --- a/pkgs/os-specific/linux/bluez/default.nix +++ b/pkgs/os-specific/linux/bluez/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, pkgconfig, dbus, glib, alsaLib, pythonPackages, readline, udev, libical, - systemd, enableWiimote ? false }: + systemd, enableWiimote ? false, enableMidi ? false }: assert stdenv.isLinux; @@ -40,8 +40,8 @@ stdenv.mkDerivation rec { "--with-systemdsystemunitdir=$(out)/etc/systemd/system" "--with-systemduserunitdir=$(out)/etc/systemd/user" "--with-udevdir=$(out)/lib/udev" - ] ++ - stdenv.lib.optional enableWiimote [ "--enable-wiimote" ]; + ] ++ stdenv.lib.optional enableWiimote [ "--enable-wiimote" ] + ++ stdenv.lib.optional enableMidi [ "--enable-midi" ]; # Work around `make install' trying to create /var/lib/bluetooth. installFlags = "statedir=$(TMPDIR)/var/lib/bluetooth"; diff --git a/pkgs/os-specific/linux/exfat/default.nix b/pkgs/os-specific/linux/exfat/default.nix index 56da5b0f16f4..0adeac7115df 100644 --- a/pkgs/os-specific/linux/exfat/default.nix +++ b/pkgs/os-specific/linux/exfat/default.nix @@ -6,13 +6,13 @@ assert lib.versionAtLeast kernel.version "4.2" || lib.versionOlder kernel.versi stdenv.mkDerivation rec { name = "exfat-nofuse-${version}-${kernel.version}"; - version = "2017-06-19"; + version = "2018-04-16"; src = fetchFromGitHub { owner = "dorimanx"; repo = "exfat-nofuse"; - rev = "de4c760bc9a05ead83bc3ec6eec6cf1fb106f523"; - sha256 = "0v979d8sbcb70lakm4jal2ck3gspkdgq9108k127f7ph08vf8djm"; + rev = "01c30ad52625a7261e1b0d874553b6ca7af25966"; + sha256 = "0n1ibamf1yj8iqapc86lfscnky9p07ngsi4f2kpv3d5r2s6mzsh6"; }; hardeningDisable = [ "pic" ]; diff --git a/pkgs/os-specific/linux/hwdata/default.nix b/pkgs/os-specific/linux/hwdata/default.nix index 724242c588a1..15b3903ddd1a 100644 --- a/pkgs/os-specific/linux/hwdata/default.nix +++ b/pkgs/os-specific/linux/hwdata/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "hwdata-${version}"; - version = "0.310"; + version = "0.311"; src = fetchurl { - url = "https://github.com/vcrhonek/hwdata/archive/v0.310.tar.gz"; - sha256 = "08mhwwc9g9cpfyxrwwviflkdk2jnqs6hc95iv4r5d59hqrj5kida"; + url = "https://github.com/vcrhonek/hwdata/archive/v0.311.tar.gz"; + sha256 = "159av9wvl3biryxd5pgqcwz6wkdaa0ydmcysmzznx939mfv7w18z"; }; preConfigure = "patchShebangs ./configure"; diff --git a/pkgs/os-specific/linux/iputils/default.nix b/pkgs/os-specific/linux/iputils/default.nix index 3fc4f3b23774..d2eab02f6753 100644 --- a/pkgs/os-specific/linux/iputils/default.nix +++ b/pkgs/os-specific/linux/iputils/default.nix @@ -35,20 +35,21 @@ stdenv.mkDerivation rec { installPhase = '' mkdir -p $out/bin - cp -p ping tracepath clockdiff arping rdisc $out/bin/ + cp -p ping tracepath clockdiff arping rdisc rarpd $out/bin/ if [ -x ninfod/ninfod ]; then cp -p ninfod/ninfod $out/bin fi mkdir -p $out/share/man/man8 cp -p \ - doc/clockdiff.8 doc/arping.8 doc/ping.8 doc/rdisc.8 doc/tracepath.8 doc/ninfod.8 \ + doc/clockdiff.8 doc/arping.8 doc/ping.8 doc/rdisc.8 doc/rarpd.8 doc/tracepath.8 doc/ninfod.8 \ $out/share/man/man8 ''; - meta = { + meta = with stdenv.lib; { homepage = https://github.com/iputils/iputils; description = "A set of small useful utilities for Linux networking"; - platforms = stdenv.lib.platforms.linux; + platforms = platforms.linux; + maintainers = with maintainers; [ lheckemann ]; }; } diff --git a/pkgs/os-specific/linux/iwd/default.nix b/pkgs/os-specific/linux/iwd/default.nix index f4f870f16c3b..a1c577d2bb57 100644 --- a/pkgs/os-specific/linux/iwd/default.nix +++ b/pkgs/os-specific/linux/iwd/default.nix @@ -3,16 +3,17 @@ let ell = fetchgit { url = https://git.kernel.org/pub/scm/libs/ell/ell.git; - rev = "8192131685be0f27d6f51b14b78ef93fa7f3c692"; - sha256 = "1k74qz3w0l4zq8llrxc4p62xy0c0n33f260vy3d14wx5rhvf0544"; + rev = "0.4"; + sha256 = "0l203n1jnqa2mcifir8ydxhcvbiwlvk89ailm0lida83l9vdlwpv"; }; in stdenv.mkDerivation rec { - name = "iwd-unstable-2017-12-14"; + name = "iwd-${version}"; + version = "0.1"; src = fetchgit { url = https://git.kernel.org/pub/scm/network/wireless/iwd.git; - rev = "cf3372235c4592ca7366b27548abc4e89a982414"; - sha256 = "0dg28j919w1v8sqr6jdj12c233rsjzd2jzkcpag1hx2h3g35hnlz"; + rev = version; + sha256 = "1f8c6xvcvqw8z78mskynd2fkghggcl7vfz8vxzvpx0fkqcprn5n0"; }; nativeBuildInputs = [ @@ -24,7 +25,7 @@ in stdenv.mkDerivation rec { readline python3Packages.python ]; - + pythonPath = [ python3Packages.dbus-python python3Packages.pygobject3 @@ -33,7 +34,8 @@ in stdenv.mkDerivation rec { enableParallelBuilding = true; configureFlags = [ - "--with-dbusconfdir=$(out)/etc/" + "--with-dbus-datadir=$(out)/etc/" + "--disable-systemd-service" ]; postUnpack = '' diff --git a/pkgs/os-specific/linux/kbd/default.nix b/pkgs/os-specific/linux/kbd/default.nix index d1e40371e370..bfade509fcac 100644 --- a/pkgs/os-specific/linux/kbd/default.nix +++ b/pkgs/os-specific/linux/kbd/default.nix @@ -32,7 +32,7 @@ stdenv.mkDerivation rec { # We get a warning in armv5tel-linux and the fuloong2f, so we # disable -Werror in it. - ${stdenv.lib.optionalString (stdenv.isArm || stdenv.hostPlatform.isMips) '' + ${stdenv.lib.optionalString (stdenv.isAarch32 || stdenv.hostPlatform.isMips) '' sed -i s/-Werror// src/Makefile.am ''} ''; diff --git a/pkgs/os-specific/linux/kernel/common-config.nix b/pkgs/os-specific/linux/kernel/common-config.nix index f8c4b95bb618..4af5889fd1cd 100644 --- a/pkgs/os-specific/linux/kernel/common-config.nix +++ b/pkgs/os-specific/linux/kernel/common-config.nix @@ -115,7 +115,6 @@ with stdenv.lib; # Enable various subsystems. ACCESSIBILITY y # Accessibility support AUXDISPLAY y # Auxiliary Display support - DONGLE y # Serial dongle support HIPPI y MTD_COMPLEX_MAPPINGS y # needed for many devices SCSI_LOWLEVEL y # enable lots of SCSI devices @@ -124,6 +123,9 @@ with stdenv.lib; SPI y # needed for many devices SPI_MASTER y WAN y + ${optionalString (versionOlder version "4.17") '' + DONGLE y # Serial dongle support + ''} # Networking options. NET y @@ -353,7 +355,7 @@ with stdenv.lib; SECURITY_SELINUX_BOOTPARAM_VALUE 0 # Disable SELinux by default SECURITY_YAMA? y # Prevent processes from ptracing non-children processes DEVKMEM n # Disable /dev/kmem - ${optionalString (! stdenv.hostPlatform.isArm) + ${optionalString (! stdenv.hostPlatform.isAarch32) (if versionOlder version "3.14" then '' CC_STACKPROTECTOR? y # Detect buffer overflows on the stack '' else '' @@ -420,7 +422,9 @@ with stdenv.lib; ${optionalString (versionAtLeast version "4.3") '' IDLE_PAGE_TRACKING y ''} - IRDA_ULTRA y # Ultra (connectionless) protocol + ${optionalString (versionOlder version "4.17") '' + IRDA_ULTRA y # Ultra (connectionless) protocol + ''} JOYSTICK_IFORCE_232? y # I-Force Serial joysticks and wheels JOYSTICK_IFORCE_USB? y # I-Force USB joysticks and wheels JOYSTICK_XPAD_FF? y # X-Box gamepad rumble support diff --git a/pkgs/os-specific/linux/kernel/linux-4.14.nix b/pkgs/os-specific/linux/kernel/linux-4.14.nix index ba589b70b6b3..47784e770127 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.14.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.14.nix @@ -3,13 +3,13 @@ with stdenv.lib; buildLinux (args // rec { - version = "4.14.34"; + version = "4.14.36"; # branchVersion needs to be x.y extraMeta.branch = concatStrings (intersperse "." (take 2 (splitString "." version))); src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "1f9bl4qw61xw49y5xz1wyilg8gh0wv9k868fh8n3hp17hm66qavq"; + sha256 = "0hxwd3kl5g7zrcl3b00nxdv0zjkmmfrk1i5v3hrjm0dmsw249qna"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.15.nix b/pkgs/os-specific/linux/kernel/linux-4.15.nix deleted file mode 100644 index 63bfc79e62d2..000000000000 --- a/pkgs/os-specific/linux/kernel/linux-4.15.nix +++ /dev/null @@ -1,18 +0,0 @@ -{ stdenv, buildPackages, hostPlatform, fetchurl, perl, buildLinux, ... } @ args: - -with stdenv.lib; - -buildLinux (args // rec { - version = "4.15.17"; - - # modDirVersion needs to be x.y.z, will automatically add .0 if needed - modDirVersion = concatStrings (intersperse "." (take 3 (splitString "." "${version}.0"))); - - # branchVersion needs to be x.y - extraMeta.branch = concatStrings (intersperse "." (take 2 (splitString "." version))); - - src = fetchurl { - url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "1f20h22rrchvqd653a3ih8q6l13zl47bp6k2339x9ihq40rg5m9g"; - }; -} // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.16.nix b/pkgs/os-specific/linux/kernel/linux-4.16.nix index aa225c8e7c79..d46c95e1a593 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.16.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.16.nix @@ -3,7 +3,7 @@ with stdenv.lib; buildLinux (args // rec { - version = "4.16.2"; + version = "4.16.4"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = concatStrings (intersperse "." (take 3 (splitString "." "${version}.0"))); @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "157q43px707nizqwzi5nk87c0nvdif9fbi751f71wpgfp3iiy2s7"; + sha256 = "0v494vm1vbyfk8xmvgf27chsjpy9x7q0iwdaana8vnih2ai6vdcs"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.4.nix b/pkgs/os-specific/linux/kernel/linux-4.4.nix index b59748541123..fe8633ed0da7 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.4.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.4.nix @@ -1,11 +1,11 @@ { stdenv, buildPackages, hostPlatform, fetchurl, perl, buildLinux, ... } @ args: buildLinux (args // rec { - version = "4.4.127"; + version = "4.4.129"; extraMeta.branch = "4.4"; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "1gscsvijik24p0skhjnhqxlvzj3kfy5cmn3x9wn6ka687hwjb3qa"; + sha256 = "0aviyky8f73l6jpi1d4by947rj78d5vckxkyf9aj73bavaxc8rd1"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.9.nix b/pkgs/os-specific/linux/kernel/linux-4.9.nix index 86ddcf99dbe8..63fe3db3b577 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.9.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.9.nix @@ -1,11 +1,11 @@ { stdenv, buildPackages, hostPlatform, fetchurl, perl, buildLinux, ... } @ args: buildLinux (args // rec { - version = "4.9.93"; + version = "4.9.96"; extraMeta.branch = "4.9"; src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "00srda6plvirmrr0bjgiksf00ssiigf5cqi4giy4mij5r6v8mxsq"; + sha256 = "0zw7x86c8qa2kzkwlxlhqzsnddyp1ncw4ja660bqnzqrnmp5jvw2"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-copperhead-hardened.nix b/pkgs/os-specific/linux/kernel/linux-copperhead-hardened.nix index 82b0b44bfc06..5685e6dd904d 100644 --- a/pkgs/os-specific/linux/kernel/linux-copperhead-hardened.nix +++ b/pkgs/os-specific/linux/kernel/linux-copperhead-hardened.nix @@ -3,9 +3,9 @@ with stdenv.lib; let - version = "4.15.16"; + version = "4.15.18"; revision = "a"; - sha256 = "0jxf01gf5rh6kwxcsv6mwlhq3wva2ps0ayrx40zwrdhkqy03w79x"; + sha256 = "1wld16i3r06mqxwwkghsxnnivg1jpc6c15y9iclhdgl4srcs1qp6"; # modVersion needs to be x.y.z, will automatically add .0 if needed modVersion = concatStrings (intersperse "." (take 3 (splitString "." "${version}.0"))); diff --git a/pkgs/os-specific/linux/kernel/linux-testing-bcachefs.nix b/pkgs/os-specific/linux/kernel/linux-testing-bcachefs.nix index f5e219bc74e3..1366a11b573c 100644 --- a/pkgs/os-specific/linux/kernel/linux-testing-bcachefs.nix +++ b/pkgs/os-specific/linux/kernel/linux-testing-bcachefs.nix @@ -1,15 +1,15 @@ { stdenv, buildPackages, hostPlatform, fetchgit, perl, buildLinux, ... } @ args: buildLinux (args // rec { - version = "4.15.2018.03.22"; + version = "4.15.2018.04.14"; modDirVersion = "4.15.0"; extraMeta.branch = "master"; extraMeta.maintainers = [ stdenv.lib.maintainers.davidak stdenv.lib.maintainers.chiiruno ]; src = fetchgit { url = "https://evilpiepirate.org/git/bcachefs.git"; - rev = "919a34d47a68f3e5f00a7ce5efb67748ec31bd62"; - sha256 = "1j17my3046ry8zdcvf8h2vnij89wkwmv64w3g2pf9lksh2909djw"; + rev = "3b7c824e9330a640312fce1b04537c684c1d602c"; + sha256 = "1l5ib28qkhrxggn6zj9b2839543anbxk2ip75yizgzlv9vr5m4pk"; }; extraConfig = '' diff --git a/pkgs/os-specific/linux/kernel/linux-testing.nix b/pkgs/os-specific/linux/kernel/linux-testing.nix index 5e8e861af258..6370f82235a7 100644 --- a/pkgs/os-specific/linux/kernel/linux-testing.nix +++ b/pkgs/os-specific/linux/kernel/linux-testing.nix @@ -1,13 +1,13 @@ { stdenv, buildPackages, hostPlatform, fetchurl, perl, buildLinux, libelf, utillinux, ... } @ args: buildLinux (args // rec { - version = "4.16-rc7"; - modDirVersion = "4.16.0-rc7"; - extraMeta.branch = "4.16"; + version = "4.17-rc2"; + modDirVersion = "4.17.0-rc2"; + extraMeta.branch = "4.17"; src = fetchurl { url = "https://git.kernel.org/torvalds/t/linux-${version}.tar.gz"; - sha256 = "13zpfjxd38202afjl6flc9brjw3sp4sfq3wls0v90k1i2b308qfi"; + sha256 = "1z4kl25x8m498wicbzhx21kvksp63ab8l2s0nfxf7fwj7dd13cld"; }; # Should the testing kernels ever be built on Hydra? diff --git a/pkgs/os-specific/linux/kernel/patches.nix b/pkgs/os-specific/linux/kernel/patches.nix index e163459d7f4f..cedb2dfc2230 100644 --- a/pkgs/os-specific/linux/kernel/patches.nix +++ b/pkgs/os-specific/linux/kernel/patches.nix @@ -73,4 +73,15 @@ rec { }; }; + # https://patchwork.kernel.org/patch/9626797/ + # Should be included in 4.17, so this patch can be dropped when 4.16 becomes obsolete. + bcm2835_mmal_v4l2_camera_driver = rec { + name = "bcm2835_mmal_v4l2_camera_driver"; + patch = fetchpatch { + name = name + ".patch"; + url = https://patchwork.kernel.org/patch/9626797/raw/; + sha256 = "0iwb0yxsf95zv4qxkvlvhqfmzx0rk13g9clvxsharvwkb4w5lwa0"; + }; + }; + } diff --git a/pkgs/os-specific/linux/mcelog/default.nix b/pkgs/os-specific/linux/mcelog/default.nix index 30c2b05b8e1e..4ebc1c00f7af 100644 --- a/pkgs/os-specific/linux/mcelog/default.nix +++ b/pkgs/os-specific/linux/mcelog/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "mcelog-${version}"; - version = "156"; + version = "157"; src = fetchFromGitHub { owner = "andikleen"; repo = "mcelog"; rev = "v${version}"; - sha256 = "0mv4sxcysl3m9wqybg6b363mawr9amzhc9v53775p4p2a47z774r"; + sha256 = "1965axyfizv2jg412a4wrrghgswwvvgymk7mbwaraw3xl9p21wgv"; }; postPatch = '' diff --git a/pkgs/os-specific/linux/musl/default.nix b/pkgs/os-specific/linux/musl/default.nix index 4d1c2cad2e33..3d515f7b762f 100644 --- a/pkgs/os-specific/linux/musl/default.nix +++ b/pkgs/os-specific/linux/musl/default.nix @@ -17,6 +17,16 @@ let sha256 = "14igk6k00bnpfw660qhswagyhvr0gfqg4q55dxvaaq7ikfkrir71"; }; + # iconv tool, implemented by musl author. + # Original: http://git.etalabs.net/cgit/noxcuse/plain/src/iconv.c?id=02d288d89683e99fd18fe9f54d4e731a6c474a4f + # We use copy from Alpine which fixes error messages, see: + # https://git.alpinelinux.org/cgit/aports/commit/main/musl/iconv.c?id=a3d97e95f766c9c378194ee49361b375f093b26f + iconv_c = fetchurl { + name = "iconv.c"; + url = "https://git.alpinelinux.org/cgit/aports/plain/main/musl/iconv.c?id=a3d97e95f766c9c378194ee49361b375f093b26f"; + sha256 = "1mzxnc2ncq8lw9x6n7p00fvfklc9p3wfv28m68j0dfz5l8q2k6pp"; + }; + in stdenv.mkDerivation rec { name = "musl-${version}"; @@ -41,6 +51,13 @@ stdenv.mkDerivation rec { --replace -fno-asynchronous-unwind-tables "" ''; + patches = [ + # Minor touchup to build system making dynamic linker symlink relative + (fetchurl { + url = https://raw.githubusercontent.com/openwrt/openwrt/87606e25afac6776d1bbc67ed284434ec5a832b4/toolchain/musl/patches/300-relative.patch; + sha256 = "0hfadrycb60sm6hb6by4ycgaqc9sgrhh42k39v8xpmcvdzxrsq2n"; + }) + ]; preConfigure = '' configureFlagsArray+=("--syslibdir=$out/lib") ''; @@ -58,6 +75,8 @@ stdenv.mkDerivation rec { dontDisableStatic = true; separateDebugInfo = true; + NIX_DONT_SET_RPATH = true; + postInstall = '' # Not sure why, but link in all but scsi directory as that's what uclibc/glibc do. # Apparently glibc provides scsi itself? @@ -68,7 +87,7 @@ stdenv.mkDerivation rec { mkdir -p $out/bin # Create 'ldd' symlink, builtin - ln -s $out/lib/libc.so $out/bin/ldd + ln -rs $out/lib/libc.so $out/bin/ldd # (impure) cc wrapper around musl for interactive usuage for i in musl-gcc musl-clang ld.musl-clang; do @@ -77,6 +96,14 @@ stdenv.mkDerivation rec { moveToOutput lib/musl-gcc.specs $dev substituteInPlace $dev/bin/musl-gcc \ --replace $out/lib/musl-gcc.specs $dev/lib/musl-gcc.specs + + # provide 'iconv' utility, using just-built headers, libc/ldso + $CC ${iconv_c} -o $out/bin/iconv \ + -I$dev/include \ + -L$out/lib -Wl,-rpath=$out/lib \ + -lc \ + -B $out/lib \ + -Wl,-dynamic-linker=$(ls $out/lib/ld-*) '' + lib.optionalString useBSDCompatHeaders '' install -D ${queue_h} $dev/include/sys/queue.h install -D ${cdefs_h} $dev/include/sys/cdefs.h diff --git a/pkgs/os-specific/linux/pam_u2f/default.nix b/pkgs/os-specific/linux/pam_u2f/default.nix index f58dadfd10ce..0f0b6ebb37a6 100644 --- a/pkgs/os-specific/linux/pam_u2f/default.nix +++ b/pkgs/os-specific/linux/pam_u2f/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "pam_u2f-${version}"; - version = "1.0.4"; + version = "1.0.5"; src = fetchurl { url = "https://developers.yubico.com/pam-u2f/Releases/${name}.tar.gz"; - sha256 = "189j0wgx6fs146vfp88djqpl1flpfb3962l1a2marlp6d12jwm3i"; + sha256 = "0bbwy9k3002anhkv67zwck3dry7blqnnp291dc4qsjrca0blw217"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/os-specific/linux/spl/default.nix b/pkgs/os-specific/linux/spl/default.nix index 2550e6d28f6c..7c37d18c8684 100644 --- a/pkgs/os-specific/linux/spl/default.nix +++ b/pkgs/os-specific/linux/spl/default.nix @@ -78,5 +78,6 @@ in version = "2018-01-24"; rev = "23602fdb39e1254c669707ec9d2d0e6bcdbf1771"; sha256 = "09py2dwj77f6s2qcnkwdslg5nxb3hq2bq39zpxpm6msqyifhl69h"; + patches = [ ./install_prefix.patch ]; }; } diff --git a/pkgs/os-specific/linux/sysstat/default.nix b/pkgs/os-specific/linux/sysstat/default.nix index d8e95ff74c43..db9f05f5f4d8 100644 --- a/pkgs/os-specific/linux/sysstat/default.nix +++ b/pkgs/os-specific/linux/sysstat/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, gettext, bzip2 }: stdenv.mkDerivation rec { - name = "sysstat-11.7.2"; + name = "sysstat-11.7.3"; src = fetchurl { url = "http://perso.orange.fr/sebastien.godard/${name}.tar.xz"; - sha256 = "169yh9d0ags9xrn5g0k42wd1c895117zbzs257cjxqnb2vk0a38v"; + sha256 = "1sk6rhdqr8xsm456fkhkcmbnqgkymqqs3jkapcf8mrnsx36gz94f"; }; buildInputs = [ gettext ]; diff --git a/pkgs/os-specific/linux/systemd/default.nix b/pkgs/os-specific/linux/systemd/default.nix index 7c9514883093..615e4f867c4d 100644 --- a/pkgs/os-specific/linux/systemd/default.nix +++ b/pkgs/os-specific/linux/systemd/default.nix @@ -79,7 +79,7 @@ in stdenv.mkDerivation rec { "-Dsystem-gid-max=499" # "-Dtime-epoch=1" - (if stdenv.isArm || stdenv.isAarch64 || !hostPlatform.isEfi then "-Dgnu-efi=false" else "-Dgnu-efi=true") + (if stdenv.isAarch32 || stdenv.isAarch64 || !hostPlatform.isEfi then "-Dgnu-efi=false" else "-Dgnu-efi=true") "-Defi-libdir=${toString gnu-efi}/lib" "-Defi-includedir=${toString gnu-efi}/include/efi" "-Defi-ldsdir=${toString gnu-efi}/lib" diff --git a/pkgs/os-specific/linux/uclibc/default.nix b/pkgs/os-specific/linux/uclibc/default.nix index c4d2bf04d7a0..180aabc94cc6 100644 --- a/pkgs/os-specific/linux/uclibc/default.nix +++ b/pkgs/os-specific/linux/uclibc/default.nix @@ -43,7 +43,7 @@ let UCLIBC_SUSV4_LEGACY y UCLIBC_HAS_THREADS_NATIVE y KERNEL_HEADERS "${linuxHeaders}/include" - '' + stdenv.lib.optionalString (stdenv.isArm && cross == null) '' + '' + stdenv.lib.optionalString (stdenv.isAarch32 && cross == null) '' CONFIG_ARM_EABI y ARCH_WANTS_BIG_ENDIAN n ARCH_BIG_ENDIAN n diff --git a/pkgs/os-specific/linux/wireguard/default.nix b/pkgs/os-specific/linux/wireguard/default.nix index 0650bfd36f34..b88646424be5 100644 --- a/pkgs/os-specific/linux/wireguard/default.nix +++ b/pkgs/os-specific/linux/wireguard/default.nix @@ -6,11 +6,11 @@ assert kernel != null -> stdenv.lib.versionAtLeast kernel.version "3.10"; let name = "wireguard-${version}"; - version = "0.0.20180304"; + version = "0.0.20180413"; src = fetchurl { url = "https://git.zx2c4.com/WireGuard/snapshot/WireGuard-${version}.tar.xz"; - sha256 = "11vp6aiqxrnwqlaslxy13cpmw2l2pdm9nhs021rv4zx61lpnbcgg"; + sha256 = "0lbjx62ihc8prqfhvmi0v1xq1q3ayzj5rfy2p5149nr9qx3z37j1"; }; meta = with stdenv.lib; { diff --git a/pkgs/os-specific/linux/zfs/default.nix b/pkgs/os-specific/linux/zfs/default.nix index d4b312ad6d54..bdc43a092f7f 100644 --- a/pkgs/os-specific/linux/zfs/default.nix +++ b/pkgs/os-specific/linux/zfs/default.nix @@ -5,6 +5,7 @@ # Userspace dependencies , zlib, libuuid, python, attr, openssl , libtirpc +, nfs-utils # Kernel dependencies , kernel ? null, spl ? null, splUnstable ? null, splLegacyCrypto ? null @@ -66,6 +67,7 @@ let substituteInPlace ./module/zfs/zfs_ctldir.c --replace "mount -t zfs" "${utillinux}/bin/mount -t zfs" substituteInPlace ./lib/libzfs/libzfs_mount.c --replace "/bin/umount" "${utillinux}/bin/umount" substituteInPlace ./lib/libzfs/libzfs_mount.c --replace "/bin/mount" "${utillinux}/bin/mount" + substituteInPlace ./lib/libshare/nfs.c --replace "/usr/sbin/exportfs" "${nfs-utils}/bin/exportfs" substituteInPlace ./cmd/ztest/ztest.c --replace "/usr/sbin/ztest" "$out/sbin/ztest" substituteInPlace ./cmd/ztest/ztest.c --replace "/usr/sbin/zdb" "$out/sbin/zdb" substituteInPlace ./config/user-systemd.m4 --replace "/usr/lib/modules-load.d" "$out/etc/modules-load.d" @@ -151,7 +153,7 @@ in { # to be adapted zfsStable = common { # comment/uncomment if breaking kernel versions are known - incompatibleKernelVersion = null; + incompatibleKernelVersion = "4.16"; # this package should point to the latest release. version = "0.7.8"; diff --git a/pkgs/servers/asterisk/default.nix b/pkgs/servers/asterisk/default.nix index c6cd9f3df4c5..10ffa918e5bd 100644 --- a/pkgs/servers/asterisk/default.nix +++ b/pkgs/servers/asterisk/default.nix @@ -18,10 +18,6 @@ let # This patch changes the runtime behavior to look for state # directories in /var rather than ${out}/var. ./runtime-vardirs.patch - (fetchpatch { - url = "http://sources.debian.net/data/main/a/asterisk/1:13.14.1~dfsg-1/debian/patches/pjsip_unresolved_symbol.patch"; - sha256 = "0i6a6zplvzbjcvxqlmr87jmrfza7c3qx0rlym2nlmzzp2m7qpnfp"; - }) ]; # Disable MD5 verification for pjsip @@ -73,9 +69,9 @@ let }; }; - pjproject-26 = fetchurl { - url = http://www.pjsip.org/release/2.6/pjproject-2.6.tar.bz2; - sha256 = "1d67c58jn22f7h6smkykk5vwl3sqpc7xi2vm3j3lbn3lq6hisnig"; + pjproject-27 = fetchurl { + url = http://www.pjsip.org/release/2.7.1/pjproject-2.7.1.tar.bz2; + sha256 = "09ii5hgl5s7grx4fiimcl3s77i385h7b3kwpfa2q0arbl1ibryjr"; }; mp3-202 = fetchsvn { @@ -88,19 +84,19 @@ in { asterisk-lts = common { - version = "13.17.1"; - sha256 = "0d7vqpkz0wv8d17vi7qxs9j7dbqwf4n80s411qva030hljcmdqdf"; + version = "13.20.0"; + sha256 = "a3d6d953f844867ea11e0be22ee6225049cd4f5870df6ab23454623bcfbc94d5"; externals = { - "externals_cache/pjproject-2.6.tar.bz2" = pjproject-26; + "externals_cache/pjproject-2.7.1.tar.bz2" = pjproject-27; "addons/mp3" = mp3-202; }; }; asterisk-stable = common { - version = "14.6.1"; - sha256 = "0xg26p8rx9gw1ym9xdnpxr7bqp0kp76afy7f4ywmh25ki41inz08"; + version = "15.3.0"; + sha256 = "f424f89f23b72f267ff9baab82d449bebbbf00c54e54fcd06b8fca13788b012c"; externals = { - "externals_cache/pjproject-2.6.tar.bz2" = pjproject-26; + "externals_cache/pjproject-2.7.1.tar.bz2" = pjproject-27; "addons/mp3" = mp3-202; }; }; diff --git a/pkgs/servers/atlassian/jira.nix b/pkgs/servers/atlassian/jira.nix index b90e68ed3bcb..fd34c1f43859 100644 --- a/pkgs/servers/atlassian/jira.nix +++ b/pkgs/servers/atlassian/jira.nix @@ -5,11 +5,11 @@ stdenv.mkDerivation rec { name = "atlassian-jira-${version}"; - version = "7.7.0"; + version = "7.9.0"; src = fetchurl { url = "https://downloads.atlassian.com/software/jira/downloads/atlassian-jira-software-${version}.tar.gz"; - sha256 = "1np1zf6yxras15ambf92g8snnvph9pp2dk4yw6w58yfil5kzp70l"; + sha256 = "1xj04a78dhjzb2ms875lfg5s3qc8rw31fws92yhmbs0k1866g33b"; }; phases = [ "unpackPhase" "buildPhase" "installPhase" "fixupPhase" ]; diff --git a/pkgs/servers/computing/storm/default.nix b/pkgs/servers/computing/storm/default.nix index 0219a1bf7ecb..90c87f8019d0 100644 --- a/pkgs/servers/computing/storm/default.nix +++ b/pkgs/servers/computing/storm/default.nix @@ -4,11 +4,11 @@ stdenv.mkDerivation rec { name = "apache-storm-" + version; - version = "1.0.1"; + version = "1.2.1"; src = fetchurl { url = "mirror://apache/storm/${name}/${name}.tar.gz"; - sha256 = "1gr00s0fhf8ci0faf3x5dinkiw9mlnc1x1vqki8cfszvij6w0x0m"; + sha256 = "177dqgbviagrpvalg8h67mwiwwgmiqsg0hh97hcqqcjg71ypnjkv"; }; buildInputs = [ zip unzip jzmq ]; @@ -19,8 +19,7 @@ stdenv.mkDerivation rec { mv examples $out/share/${name}/. rm -f lib/jzmq* || exit 1 - mv lib $out/. - mv external extlib* $out/lib/. + mv external extlib* lib $out/. mv conf bin $out/. mv log4j2 $out/conf/. ''; diff --git a/pkgs/servers/dns/bind/default.nix b/pkgs/servers/dns/bind/default.nix index 86e756a0db37..4002c6b3542f 100644 --- a/pkgs/servers/dns/bind/default.nix +++ b/pkgs/servers/dns/bind/default.nix @@ -1,8 +1,10 @@ { stdenv, lib, fetchurl, openssl, libtool, perl, libxml2 +, enablePython ? false, python3 ? null , enableSeccomp ? false, libseccomp ? null, buildPackages }: assert enableSeccomp -> libseccomp != null; +assert enablePython -> python3 != null; let version = "9.12.1"; in @@ -20,8 +22,9 @@ stdenv.mkDerivation rec { stdenv.lib.optional stdenv.isDarwin ./darwin-openssl-linking-fix.patch; nativeBuildInputs = [ perl ]; - buildInputs = [ openssl libtool libxml2 ] ++ - stdenv.lib.optional enableSeccomp libseccomp; + buildInputs = [ openssl libtool libxml2 ] + ++ lib.optional enableSeccomp libseccomp + ++ lib.optional enablePython python3; STD_CDEFINES = [ "-DDIG_SIGCHASE=1" ]; # support +sigchase @@ -32,6 +35,7 @@ stdenv.mkDerivation rec { "--with-libtool" "--with-libxml2=${libxml2.dev}" "--with-openssl=${openssl.dev}" + (if enablePython then "--with-python" else "--without-python") "--without-atf" "--without-dlopen" "--without-docbook-xsl" @@ -41,7 +45,6 @@ stdenv.mkDerivation rec { "--without-lmdb" "--without-pkcs11" "--without-purify" - "--without-python" "--with-randomdev=/dev/random" "--with-ecdsa" "--with-gost" diff --git a/pkgs/servers/dns/dnsdist/default.nix b/pkgs/servers/dns/dnsdist/default.nix new file mode 100644 index 000000000000..7369713dc86a --- /dev/null +++ b/pkgs/servers/dns/dnsdist/default.nix @@ -0,0 +1,34 @@ +{ stdenv, fetchurl, pkgconfig, systemd +, boost, libsodium, libedit, re2 +, net_snmp, lua, protobuf, openssl }: stdenv.mkDerivation rec { + name = "dnsdist-${version}"; + version = "1.3.0"; + + src = fetchurl { + url = "https://downloads.powerdns.com/releases/dnsdist-${version}.tar.bz2"; + sha256 = "025sgvpi3ps0n4mzfwkk6a5ang90a3c7s2fi9vni6jj0p16wsrxa"; + }; + + nativeBuildInputs = [ pkgconfig ]; + buildInputs = [ systemd boost libsodium libedit re2 net_snmp lua protobuf openssl ]; + + configureFlags = [ + "--enable-libsodium" + "--enable-re2" + "--enable-dnscrypt" + "--enable-dns-over-tls" + "--with-protobuf=yes" + "--with-net-snmp" + "--disable-dependency-tracking" + "--enable-unit-tests" + "--enable-systemd" + ]; + + doCheck = true; + + meta = with stdenv.lib; { + description = "DNS Loadbalancer"; + homepage = "https://dnsdist.org"; + license = licenses.gpl2; + }; +} diff --git a/pkgs/servers/dns/knot-dns/default.nix b/pkgs/servers/dns/knot-dns/default.nix index de37aeaa590b..88fa07009f83 100644 --- a/pkgs/servers/dns/knot-dns/default.nix +++ b/pkgs/servers/dns/knot-dns/default.nix @@ -32,7 +32,7 @@ stdenv.mkDerivation rec { #doCheck = true; problems in combination with dynamic linking - postInstall = ''rm -r "$out"/var''; + postInstall = ''rm -r "$out"/var "$out"/lib/*.la''; meta = with stdenv.lib; { description = "Authoritative-only DNS server from .cz domain registry"; diff --git a/pkgs/servers/dns/knot-resolver/default.nix b/pkgs/servers/dns/knot-resolver/default.nix index 09fda1b81b8b..1a5577e81655 100644 --- a/pkgs/servers/dns/knot-resolver/default.nix +++ b/pkgs/servers/dns/knot-resolver/default.nix @@ -12,11 +12,11 @@ inherit (stdenv.lib) optional optionals optionalString concatStringsSep; unwrapped = stdenv.mkDerivation rec { name = "knot-resolver-${version}"; - version = "2.2.0"; + version = "2.3.0"; src = fetchurl { url = "http://secure.nic.cz/files/knot-resolver/${name}.tar.xz"; - sha256 = "1yhlwvpl81klyfb8hhvrhii99q7wvydi3vandmq9j7dvig6z1dvv"; + sha256 = "2d19c5daf8440bd3d2acd1886b9ede65f04f7753c6fd4618a92a1a4ba3b27a9b"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/servers/emby/default.nix b/pkgs/servers/emby/default.nix index eeb3d39fa1da..964fa77c31a9 100644 --- a/pkgs/servers/emby/default.nix +++ b/pkgs/servers/emby/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "emby-${version}"; - version = "3.3.0.0"; + version = "3.3.1.0"; src = fetchurl { url = "https://github.com/MediaBrowser/Emby/releases/download/${version}/Emby.Mono.zip"; - sha256 = "14nnrlwx8bghiz72lspxahwadhvnf8vs3bqbffnd5nrrv4shijhm"; + sha256 = "04qq3rl3pwxnsr8z6x3dwplh6brn1nd0jpmmnvizln4ffx9wspb8"; }; buildInputs = with pkgs; [ diff --git a/pkgs/servers/foundationdb/default.nix b/pkgs/servers/foundationdb/default.nix new file mode 100644 index 000000000000..95326b4c1c6c --- /dev/null +++ b/pkgs/servers/foundationdb/default.nix @@ -0,0 +1,99 @@ +{ stdenv, fetchurl, fetchFromGitHub +, which, findutils, m4, gawk, python, openjdk, mono58, libressl_2_6 +}: + +let + version = "5.1.7"; + branch = "release-5.1"; + rev = "9ad8d02386d4a6a5efecf898df80f2747695c627"; + sha256 = "1rc472ih24f9s5g3xmnlp3v62w206ny0pvvw02bzpix2sdrpbp06"; + + # hysterical raisins dictate a version of boost this old. however, + # we luckily do not need to build anything, we just need the header + # files. + boost152 = stdenv.mkDerivation rec { + name = "boost-headers-1.52.0"; + + src = fetchurl { + url = "mirror://sourceforge/boost/boost_1_52_0.tar.bz2"; + sha256 = "14mc7gsnnahdjaxbbslzk79rc0d12h1i681cd3srdwr3fzynlar2"; + }; + + buildPhase = ":"; + configurePhase = ":"; + installPhase = '' + mkdir -p $out/include/ + cp -R boost $out/include/ + ''; + }; + +in stdenv.mkDerivation rec { + name = "foundationdb-${version}"; + inherit version; + + src = fetchFromGitHub { + owner = "apple"; + repo = "foundationdb"; + inherit rev sha256; + }; + + nativeBuildInputs = [ gawk which m4 findutils boost152 mono58 ]; + buildInputs = [ python openjdk libressl_2_6 ]; + + patches = + [ ./fix-scm-version.patch + ./ldflags.patch + ]; + + postPatch = '' + substituteInPlace ./build/scver.mk \ + --subst-var-by NIXOS_FDB_VERSION_ID "${rev}" \ + --subst-var-by NIXOS_FDB_SCBRANCH "${branch}" + + substituteInPlace ./Makefile \ + --replace 'shell which ccache' 'shell true' \ + --replace -Werror "" + + substituteInPlace ./Makefile \ + --replace libstdc++_pic libstdc++ + + substituteInPlace ./build/link-validate.sh \ + --replace 'exit 1' '#exit 1' + + patchShebangs . + ''; + + enableParallelBuilding = true; + makeFlags = [ "all" "fdb_c" "KVRELEASE=1" ]; + + configurePhase = ":"; + installPhase = '' + mkdir -vp $out/{bin,libexec/plugins} $lib/lib $dev/include/foundationdb + + cp -v ./lib/libfdb_c.so $lib/lib + cp -v ./lib/libFDBLibTLS.so $out/libexec/plugins/FDBLibTLS.so + + cp -v ./bindings/c/foundationdb/fdb_c.h $dev/include/foundationdb + cp -v ./bindings/c/foundationdb/fdb_c_options.g.h $dev/include/foundationdb + + for x in fdbbackup fdbcli fdbserver fdbmonitor; do + cp -v "./bin/$x" $out/bin; + done + + ln -sfv $out/bin/fdbbackup $out/bin/dr_agent + ln -sfv $out/bin/fdbbackup $out/bin/fdbrestore + ln -sfv $out/bin/fdbbackup $out/bin/fdbdr + + ln -sfv $out/bin/fdbbackup $out/libexec/backup_agent + ''; + + outputs = [ "out" "lib" "dev" ]; + + meta = with stdenv.lib; { + description = "Open source, distributed, transactional key-value store"; + homepage = https://www.foundationdb.org; + license = licenses.asl20; + platforms = platforms.linux; + maintainers = with maintainers; [ thoughtpolice ]; + }; +} diff --git a/pkgs/servers/foundationdb/fix-scm-version.patch b/pkgs/servers/foundationdb/fix-scm-version.patch new file mode 100644 index 000000000000..0e0df7ade82b --- /dev/null +++ b/pkgs/servers/foundationdb/fix-scm-version.patch @@ -0,0 +1,42 @@ +diff --git a/build/scver.mk b/build/scver.mk +index bdae8be..7539864 100644 +--- a/build/scver.mk ++++ b/build/scver.mk +@@ -98,33 +98,10 @@ endif + GITPRESENT := $(wildcard $(FDBDIR)/.git) + HGPRESENT := $(wildcard $(FDBDIR)/.hg) + +-# Use Git, if not missing +-ifneq ($(GITPRESENT),) +- SCVER := $(shell cd "$(FDBDIR)" && git --version 2>/dev/null) +- ifneq ($(SCVER),) +- VERSION_ID := $(shell cd "$(FDBDIR)" && git rev-parse --verify HEAD) +- SOURCE_CONTROL := GIT +- SCBRANCH := $(shell cd "$(FDBDIR)" && git rev-parse --abbrev-ref HEAD) +- else +-$(error Missing git executable on $(PLATFORM) ) +- endif +-# Otherwise, use Mercurial +-else +- # Otherwise, use Mercurial, if not missing +- ifneq ($(HGPRESENT),) +- SCVER := $(shell cd "$(FDBDIR)" && hg --version 2>/dev/null) +- ifdef SCVER +- VERSION_ID := $(shell cd "$(FDBDIR)" && hg id -n) +- SOURCE_CONTROL := MERCURIAL +- SCBRANCH := $(shell cd "$(FDBDIR)" && hg branch) +- else +-$(error Missing hg executable on $(PLATFORM)) +- endif +- else +- FDBFILES := (shell ls -la $(FDBDIR)) +-$(error Missing source control information for source on $(PLATFORM) in directory: $(FDBDIR) with files: $(FDBFILES)) +- endif +-endif ++# NixOS-specific non-VCS packaging, filled out by the nix build ++SOURCE_CONTROL := GIT ++VERSION_ID := @NIXOS_FDB_VERSION_ID@ ++SCBRANCH := @NIXOS_FDB_SCBRANCH@ + + # Set the RELEASE variable based on the KVRELEASE variable. + ifeq ($(KVRELEASE),1) diff --git a/pkgs/servers/foundationdb/ldflags.patch b/pkgs/servers/foundationdb/ldflags.patch new file mode 100644 index 000000000000..4d523a7ecdd3 --- /dev/null +++ b/pkgs/servers/foundationdb/ldflags.patch @@ -0,0 +1,90 @@ +diff --git a/FDBLibTLS/local.mk b/FDBLibTLS/local.mk +index 0b6eac8..b1891ca 100644 +--- a/FDBLibTLS/local.mk ++++ b/FDBLibTLS/local.mk +@@ -1,6 +1,5 @@ + FDBLibTLS_CFLAGS := -fPIC -I/usr/local/include -I$(BOOSTDIR) +-FDBLibTLS_STATIC_LIBS := -ltls -lssl -lcrypto +-FDBLibTLS_LDFLAGS := -L/usr/local/lib -static-libstdc++ -static-libgcc -lrt ++FDBLibTLS_LDFLAGS := -L/usr/local/lib -static-libstdc++ -static-libgcc -lrt -ltls -lssl -lcrypto + FDBLibTLS_LDFLAGS += -Wl,-soname,FDBLibTLS.so -Wl,--version-script=FDBLibTLS/FDBLibTLS.map + + # The plugin isn't a typical library, so it feels more sensible to have a copy +diff --git a/bindings/c/local.mk b/bindings/c/local.mk +index 44f0c31..7aea5a4 100644 +--- a/bindings/c/local.mk ++++ b/bindings/c/local.mk +@@ -29,8 +29,8 @@ fdb_c_tests_HEADERS := -Ibindings/c + CLEAN_TARGETS += fdb_c_tests_clean + + ifeq ($(PLATFORM),linux) +- fdb_c_LIBS += lib/libstdc++.a -lm -lpthread -lrt -ldl +- fdb_c_LDFLAGS += -Wl,--version-script=bindings/c/fdb_c.map -static-libgcc -Wl,-z,nodelete ++ fdb_c_LIBS += lib/libstdc++.a ++ fdb_c_LDFLAGS += -Wl,--version-script=bindings/c/fdb_c.map -static-libgcc -Wl,-z,nodelete -lm -lpthread -lrt -ldl + fdb_c_tests_LIBS += -lpthread + endif + +diff --git a/bindings/flow/tester/local.mk b/bindings/flow/tester/local.mk +index 2ef4fcb..6e59625 100644 +--- a/bindings/flow/tester/local.mk ++++ b/bindings/flow/tester/local.mk +@@ -35,8 +35,7 @@ _fdb_flow_tester_clean: + @rm -rf bindings/flow/bin + + ifeq ($(PLATFORM),linux) +- fdb_flow_tester_LIBS += -ldl -lpthread -lrt +- fdb_flow_tester_LDFLAGS += -static-libstdc++ -static-libgcc ++ fdb_flow_tester_LDFLAGS += -static-libstdc++ -static-libgcc -ldl -lpthread -lrt + else ifeq ($(PLATFORM),osx) + fdb_flow_tester_LDFLAGS += -lc++ + endif +diff --git a/fdbbackup/local.mk b/fdbbackup/local.mk +index 033fe7d..865fc92 100644 +--- a/fdbbackup/local.mk ++++ b/fdbbackup/local.mk +@@ -25,8 +25,7 @@ fdbbackup_LDFLAGS := $(fdbrpc_LDFLAGS) + fdbbackup_LIBS := lib/libfdbclient.a lib/libfdbrpc.a lib/libflow.a + + ifeq ($(PLATFORM),linux) +- fdbbackup_LIBS += -ldl -lpthread -lrt +- fdbbackup_LDFLAGS += -static-libstdc++ -static-libgcc ++ fdbbackup_LDFLAGS += -static-libstdc++ -static-libgcc -ldl -lpthread -lrt + + # GPerfTools profiler (uncomment to use) + # fdbbackup_CFLAGS += -I/opt/gperftools/include -DUSE_GPERFTOOLS=1 +diff --git a/fdbcli/local.mk b/fdbcli/local.mk +index 81a4a42..892c079 100644 +--- a/fdbcli/local.mk ++++ b/fdbcli/local.mk +@@ -22,14 +22,13 @@ + + fdbcli_CFLAGS := $(fdbclient_CFLAGS) + fdbcli_LDFLAGS := $(fdbrpc_LDFLAGS) +-fdbcli_LIBS := lib/libfdbclient.a lib/libfdbrpc.a lib/libflow.a -ldl ++fdbcli_LIBS := lib/libfdbclient.a lib/libfdbrpc.a lib/libflow.a + fdbcli_STATIC_LIBS := + + fdbcli_GENERATED_SOURCES += versions.h + + ifeq ($(PLATFORM),linux) +- fdbcli_LDFLAGS += -static-libstdc++ -static-libgcc +- fdbcli_LIBS += -lpthread -lrt ++ fdbcli_LDFLAGS += -static-libstdc++ -static-libgcc -lpthread -lrt -ldl + else ifeq ($(PLATFORM),osx) + fdbcli_LDFLAGS += -lc++ + endif +diff --git a/fdbserver/local.mk b/fdbserver/local.mk +index 78cad1b..36f2c0f 100644 +--- a/fdbserver/local.mk ++++ b/fdbserver/local.mk +@@ -25,8 +25,7 @@ fdbserver_LDFLAGS := $(fdbrpc_LDFLAGS) + fdbserver_LIBS := lib/libfdbclient.a lib/libfdbrpc.a lib/libflow.a + + ifeq ($(PLATFORM),linux) +- fdbserver_LIBS += -ldl -lpthread -lrt +- fdbserver_LDFLAGS += -static-libstdc++ -static-libgcc ++ fdbserver_LDFLAGS += -static-libstdc++ -static-libgcc -ldl -lpthread -lrt + + # GPerfTools profiler (uncomment to use) + # fdbserver_CFLAGS += -I/opt/gperftools/include -DUSE_GPERFTOOLS=1 diff --git a/pkgs/servers/freeradius/default.nix b/pkgs/servers/freeradius/default.nix index c6ec3d46dda3..a3e83f4e069e 100644 --- a/pkgs/servers/freeradius/default.nix +++ b/pkgs/servers/freeradius/default.nix @@ -40,11 +40,11 @@ assert withCollectd -> collectd != null; with stdenv.lib; stdenv.mkDerivation rec { name = "freeradius-${version}"; - version = "3.0.16"; + version = "3.0.17"; src = fetchurl { url = "ftp://ftp.freeradius.org/pub/freeradius/freeradius-server-${version}.tar.gz"; - sha256 = "062dw4ckaa7k2br16l3naz9dr7hvzqhpxdwam3klq1i44v4hvl1b"; + sha256 = "0bc35knv46z729l4h22rirqns5v6jb0fzcffnjayhs8wjysfkfyy"; }; nativeBuildInputs = [ autoreconfHook ]; diff --git a/pkgs/servers/ftp/bftpd/default.nix b/pkgs/servers/ftp/bftpd/default.nix index 38fb7d250e34..c35177e6aa90 100644 --- a/pkgs/servers/ftp/bftpd/default.nix +++ b/pkgs/servers/ftp/bftpd/default.nix @@ -1,24 +1,36 @@ -{stdenv, fetchurl}: -stdenv.mkDerivation rec { - name = "${pname}-${version}"; +{ stdenv, fetchurl }: + +let pname = "bftpd"; + +in stdenv.mkDerivation rec { + name = "${pname}-${version}"; version = "4.9"; - # or fetchFromGitHub(owner,repo,rev) or fetchgit(rev) + src = fetchurl { url = "mirror://sourceforge/project/${pname}/${pname}/${name}/${name}.tar.gz"; sha256 = "13pjil9cjggpi773m0516lszyqvwzlgcrmmj8yn9nc24rbxwvn6d"; }; - buildInputs = []; + preConfigure = '' sed -re 's/-[og] 0//g' -i Makefile* ''; - meta = { + + postInstall = '' + mkdir -p $out/share/doc/${pname} + mv $out/etc/*.conf $out/share/doc/${pname} + rm -rf $out/{etc,var} + ''; + + enableParallelBuilding = true; + + meta = with stdenv.lib; { inherit version; - description = ''A minimal ftp server''; - license = stdenv.lib.licenses.gpl2Plus; - maintainers = [stdenv.lib.maintainers.raskin]; - platforms = stdenv.lib.platforms.linux; - homepage = http://bftpd.sf.net/; + description = "A minimal ftp server"; downloadPage = "http://bftpd.sf.net/download.html"; + homepage = http://bftpd.sf.net/; + license = licenses.gpl2Plus; + maintainers = with maintainers; [ raskin ]; + platforms = platforms.linux; }; } diff --git a/pkgs/servers/home-assistant/appdaemon.nix b/pkgs/servers/home-assistant/appdaemon.nix index a6119e58d7cf..493131795034 100644 --- a/pkgs/servers/home-assistant/appdaemon.nix +++ b/pkgs/servers/home-assistant/appdaemon.nix @@ -33,11 +33,11 @@ let in python.pkgs.buildPythonApplication rec { pname = "appdaemon"; - version = "3.0.0"; + version = "3.0.1"; src = python.pkgs.fetchPypi { inherit pname version; - sha256 = "ed925d3cb25db2c3f57304a0bca8fd0d9072d7ffe347ac5fcf68c4a30b7f1721"; + sha256 = "ad16773da21e34e258970bf5740d1634a36c8202ac72c6925d960308ef1c58cf"; }; propagatedBuildInputs = with python.pkgs; [ diff --git a/pkgs/servers/home-assistant/component-packages.nix b/pkgs/servers/home-assistant/component-packages.nix index 94dee4c87240..3a74a43d14d5 100644 --- a/pkgs/servers/home-assistant/component-packages.nix +++ b/pkgs/servers/home-assistant/component-packages.nix @@ -2,7 +2,7 @@ # Do not edit! { - version = "0.66.1"; + version = "0.67.1"; components = { "abode" = ps: with ps; [ ]; "ads" = ps: with ps; [ ]; @@ -55,10 +55,11 @@ "climate.sensibo" = ps: with ps; [ ]; "climate.touchline" = ps: with ps; [ ]; "climate.venstar" = ps: with ps; [ ]; - "cloud" = ps: with ps; [ ]; + "cloud" = ps: with ps; [ warrant ]; "coinbase" = ps: with ps; [ ]; "comfoconnect" = ps: with ps; [ ]; "config.config_entries" = ps: with ps; [ ]; + "cover.gogogate2" = ps: with ps; [ ]; "cover.myq" = ps: with ps; [ ]; "daikin" = ps: with ps; [ ]; "datadog" = ps: with ps; [ datadog ]; @@ -71,6 +72,7 @@ "device_tracker.bluetooth_tracker" = ps: with ps; [ ]; "device_tracker.cisco_ios" = ps: with ps; [ pexpect ]; "device_tracker.fritz" = ps: with ps; [ fritzconnection ]; + "device_tracker.google_maps" = ps: with ps; [ ]; "device_tracker.icloud" = ps: with ps; [ ]; "device_tracker.linksys_ap" = ps: with ps; [ beautifulsoup4 ]; "device_tracker.mikrotik" = ps: with ps; [ ]; @@ -84,6 +86,7 @@ "device_tracker.unifi" = ps: with ps; [ pyunifi ]; "device_tracker.unifi_direct" = ps: with ps; [ pexpect ]; "device_tracker.upc_connect" = ps: with ps; [ defusedxml ]; + "device_tracker.xiaomi_miio" = ps: with ps; [ ]; "digital_ocean" = ps: with ps; [ digital-ocean ]; "discovery" = ps: with ps; [ netdisco ]; "dominos" = ps: with ps; [ ]; @@ -99,6 +102,7 @@ "fan.xiaomi_miio" = ps: with ps; [ construct ]; "feedreader" = ps: with ps; [ feedparser ]; "ffmpeg" = ps: with ps; [ ha-ffmpeg ]; + "folder_watcher" = ps: with ps; [ watchdog ]; "frontend" = ps: with ps; [ ]; "gc100" = ps: with ps; [ ]; "goalfeed" = ps: with ps; [ ]; @@ -139,6 +143,7 @@ "light.lifx_legacy" = ps: with ps; [ ]; "light.limitlessled" = ps: with ps; [ ]; "light.mystrom" = ps: with ps; [ ]; + "light.nanoleaf_aurora" = ps: with ps; [ ]; "light.osramlightify" = ps: with ps; [ ]; "light.piglow" = ps: with ps; [ ]; "light.rpi_gpio_pwm" = ps: with ps; [ ]; @@ -205,7 +210,6 @@ "media_player.yamaha_musiccast" = ps: with ps; [ ]; "media_player.ziggo_mediabox_xl" = ps: with ps; [ ]; "melissa" = ps: with ps; [ ]; - "mercedesme" = ps: with ps; [ ]; "mochad" = ps: with ps; [ ]; "modbus" = ps: with ps; [ ]; "mqtt" = ps: with ps; [ paho-mqtt ]; @@ -230,6 +234,7 @@ "notify.kodi" = ps: with ps; [ jsonrpc-async ]; "notify.lametric" = ps: with ps; [ ]; "notify.mailgun" = ps: with ps; [ ]; + "notify.mastodon" = ps: with ps; [ ]; "notify.matrix" = ps: with ps; [ matrix-client ]; "notify.message_bird" = ps: with ps; [ ]; "notify.pushbullet" = ps: with ps; [ pushbullet ]; @@ -375,6 +380,7 @@ "sensor.ups" = ps: with ps; [ ]; "sensor.vasttrafik" = ps: with ps; [ ]; "sensor.waqi" = ps: with ps; [ ]; + "sensor.waze_travel_time" = ps: with ps; [ ]; "sensor.whois" = ps: with ps; [ ]; "sensor.xbox_live" = ps: with ps; [ ]; "sensor.xiaomi_miio" = ps: with ps; [ construct ]; diff --git a/pkgs/servers/home-assistant/default.nix b/pkgs/servers/home-assistant/default.nix index 04d0ba66486f..0f15b21e4685 100644 --- a/pkgs/servers/home-assistant/default.nix +++ b/pkgs/servers/home-assistant/default.nix @@ -8,10 +8,10 @@ let py = python3.override { packageOverrides = self: super: { aiohttp = super.aiohttp.overridePythonAttrs (oldAttrs: rec { - version = "3.0.9"; + version = "3.1.1"; src = oldAttrs.src.override { inherit version; - sha256 = "281a9fa56b5ce587a2147ec285d18a224942f7e020581afa6cc44d7caecf937b"; + sha256 = "dc5cab081d4b334d0440b019edf24fe1cb138b8114e0e22d2b0661284bc1775f"; }; }); pytest = super.pytest.overridePythonAttrs (oldAttrs: rec { @@ -58,7 +58,7 @@ let extraBuildInputs = extraPackages py.pkgs; # Don't forget to run parse-requirements.py after updating - hassVersion = "0.66.1"; + hassVersion = "0.67.1"; in with py.pkgs; buildPythonApplication rec { pname = "homeassistant"; @@ -73,7 +73,7 @@ in with py.pkgs; buildPythonApplication rec { owner = "home-assistant"; repo = "home-assistant"; rev = version; - sha256 = "16yz5mfzpfms22f8linw1k3wjp3jpwj270vy2rc893x9bzsppfl0"; + sha256 = "02czbqdsdar8rjkr0r5g6j1x9caazcir2w1hp595z4cn90c0342f"; }; propagatedBuildInputs = [ diff --git a/pkgs/servers/http/4store/default.nix b/pkgs/servers/http/4store/default.nix index 186b0790e4a1..664953ca34dc 100644 --- a/pkgs/servers/http/4store/default.nix +++ b/pkgs/servers/http/4store/default.nix @@ -33,7 +33,7 @@ stdenv.mkDerivation rec { sed -e 's@#! */bin/bash@#! ${stdenv.shell}@' -i configure find . -name Makefile -exec sed -e "s@/usr/local@$out@g" -i '{}' ';' - rm src/utilities/4s-backend + rm src/utilities/4s-backend sed -e 's@/var/lib/4store@${db_dir}@g' -i configure.ac src/utilities/* sed -e '/FS_STORE_ROOT/d' -i src/utilities/Makefile* ''; @@ -45,5 +45,6 @@ stdenv.mkDerivation rec { homepage = https://4store.danielknoell.de/; maintainers = with maintainers; [ raskin ]; platforms = platforms.linux; + broken = true; # since 2018-04-11 }; } diff --git a/pkgs/servers/http/apache-modules/mod_wsgi/default.nix b/pkgs/servers/http/apache-modules/mod_wsgi/default.nix index 0599d3affc89..948ef345e10d 100644 --- a/pkgs/servers/http/apache-modules/mod_wsgi/default.nix +++ b/pkgs/servers/http/apache-modules/mod_wsgi/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "mod_wsgi-${version}"; - version = "4.6.3"; + version = "4.6.4"; src = fetchurl { url = "https://github.com/GrahamDumpleton/mod_wsgi/archive/${version}.tar.gz"; - sha256 = "1vi2bf2spak70qqc1c673a7pwmzq01gmli43xwhrwdw7l2ig4wj9"; + sha256 = "1hyaxr9km7cj4k6b0d6xx3bplpa8483fhyk9x802sl22m3f2vc1k"; }; buildInputs = [ apacheHttpd python2 ]; diff --git a/pkgs/servers/http/nginx/modules.nix b/pkgs/servers/http/nginx/modules.nix index 95e156f96275..0e53b35e06d0 100644 --- a/pkgs/servers/http/nginx/modules.nix +++ b/pkgs/servers/http/nginx/modules.nix @@ -5,8 +5,8 @@ src = let gitsrc = pkgs.fetchFromGitHub { owner = "eustas"; repo = "ngx_brotli"; - rev = "6a1174446f5a866d3d13615dd2824177570f0a69"; - sha256 = "148xfh6w1wgql2jj922ryiddrs93dyacs903j2hnil67cpia45p6"; + rev = "37ab9b2933a0b756ba3447000b7f31d432ed8228"; # v0.1.1 + sha256 = "114ai8v9ns23qm12wp9dgdjvldqjnrmb3cmarkn0d3k6n3bm01bf"; }; in pkgs.runCommandNoCC "ngx_brotli-src" {} '' cp -a ${gitsrc} $out substituteInPlace $out/config \ diff --git a/pkgs/servers/http/yaws/default.nix b/pkgs/servers/http/yaws/default.nix index ed7765b15403..aae4589ebbe8 100644 --- a/pkgs/servers/http/yaws/default.nix +++ b/pkgs/servers/http/yaws/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "yaws-${version}"; - version = "2.0.4"; + version = "2.0.5"; src = fetchurl { url = "http://yaws.hyber.org/download/${name}.tar.gz"; - sha256 = "1ig6q4waqlb6h1hhrly7hslfnqczlbm79vvhr5j7rp5a2p1pfrns"; + sha256 = "00bnvf26xlhm3v3c6jzk5kcdk8jkwr1gbd2f4h329lyrpjsx30my"; }; # The tarball includes a symlink yaws -> yaws-1.95, which seems to be diff --git a/pkgs/servers/irc/ircd-hybrid/default.nix b/pkgs/servers/irc/ircd-hybrid/default.nix index 656f0aa02233..c73c69e6ee5a 100644 --- a/pkgs/servers/irc/ircd-hybrid/default.nix +++ b/pkgs/servers/irc/ircd-hybrid/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, openssl, zlib }: stdenv.mkDerivation rec { - name = "ircd-hybrid-8.2.22"; + name = "ircd-hybrid-8.2.24"; src = fetchurl { url = "mirror://sourceforge/ircd-hybrid/${name}.tgz"; - sha256 = "1i5iv5hc8gbaw74mz18zdjzv3dsvyvr8adldj8p1726h4i2xzn6p"; + sha256 = "03nmzrhqfsxwry316nm80m9p285v65fz75ns7fg623hcy65jv97a"; }; buildInputs = [ openssl zlib ]; diff --git a/pkgs/servers/isso/default.nix b/pkgs/servers/isso/default.nix new file mode 100644 index 000000000000..5aafe55512be --- /dev/null +++ b/pkgs/servers/isso/default.nix @@ -0,0 +1,54 @@ +{ stdenv, python2, fetchurl, fetchFromGitHub }: + +let python = python2.override { + packageOverrides = self: super: { + misaka = super.misaka.overridePythonAttrs (old: rec { + version = "1.0.2"; + src = old.src.override { + inherit version; + sha256 = "05rmjxlfhghj90m1kc55lx3z8igabw5y8wmly66p3hphdy4f95v1"; + }; + propagatedBuildInputs = [ ]; + }); + html5lib = super.html5lib.overridePythonAttrs (old: rec { + version = "0.9999999"; + src = old.src.override { + inherit version; + sha256 = "2612a191a8d5842bfa057e41ba50bbb9dcb722419d2408c78cff4758d0754868"; + }; + checkInputs = with self; [ nose flake8 ]; + propagatedBuildInputs = with self; [ six ]; + checkPhase = '' + nosetests + ''; + }); + }; +}; + +in with python.pkgs; buildPythonApplication rec { + pname = "isso"; + version = "0.10.6"; + + # no tests on PyPI + src = fetchFromGitHub { + owner = "posativ"; + repo = pname; + rev = version; + sha256 = "19x9xbwd15fikhchyl4i1wrqx589hdmh279xhnxdszrq898igywb"; + }; + + propagatedBuildInputs = [ misaka werkzeug ipaddr configparser html5lib ]; + + checkInputs = [ nose ]; + + checkPhase = '' + ${python.interpreter} setup.py nosetests + ''; + + meta = with stdenv.lib; { + description = "A commenting server similar to Disqus"; + homepage = https://posativ.org/isso/; + license = licenses.mit; + maintainers = with maintainers; [ fgaz ]; + }; +} diff --git a/pkgs/servers/jackett/default.nix b/pkgs/servers/jackett/default.nix index 34d242b92a8a..f2d38111d5d2 100644 --- a/pkgs/servers/jackett/default.nix +++ b/pkgs/servers/jackett/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "jackett-${version}"; - version = "0.8.823"; + version = "0.8.886"; src = fetchurl { url = "https://github.com/Jackett/Jackett/releases/download/v${version}/Jackett.Binaries.Mono.tar.gz"; - sha256 = "0hicz21dvcakqkxix70akc3rrz570j3g0a512pqrr3bdq7ay0dkk"; + sha256 = "18agnavhch29pi1w6vp374cs6bz2j7bf55mh4ym0cs038h5xkdvv"; }; buildInputs = [ makeWrapper ]; diff --git a/pkgs/servers/mail/exim/default.nix b/pkgs/servers/mail/exim/default.nix index b386fadabd46..393ce2c5cda9 100644 --- a/pkgs/servers/mail/exim/default.nix +++ b/pkgs/servers/mail/exim/default.nix @@ -3,11 +3,11 @@ }: stdenv.mkDerivation rec { - name = "exim-4.90.1"; + name = "exim-4.91"; src = fetchurl { url = "http://ftp.exim.org/pub/exim/exim4/${name}.tar.xz"; - sha256 = "09ppq8l7cah6dcqwdvpa6r12i6fdcd9lvxlfp18mggj3438xz62w"; + sha256 = "066ip7a5lqfn9rcr14j4nm0kqysw6mzvbbb0ip50lmfm0fqsqmzc"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/servers/matrix-synapse/default.nix b/pkgs/servers/matrix-synapse/default.nix index 3cf460539699..4c82f5cfdde8 100644 --- a/pkgs/servers/matrix-synapse/default.nix +++ b/pkgs/servers/matrix-synapse/default.nix @@ -26,13 +26,13 @@ let }; in pythonPackages.buildPythonApplication rec { name = "matrix-synapse-${version}"; - version = "0.27.2"; + version = "0.27.4"; src = fetchFromGitHub { owner = "matrix-org"; repo = "synapse"; rev = "v${version}"; - sha256 = "00hcjs5hbayamckcsfd92s7f3da9jv5nm5ygvwinyc7ml7gn66i3"; + sha256 = "051bwr4vz8mwglh1m9rqlljbn8g3alvd52f09ff887nsi6z3jc17"; }; patches = [ diff --git a/pkgs/servers/metabase/default.nix b/pkgs/servers/metabase/default.nix index 90bd5b614dd8..d36810b9f5c1 100644 --- a/pkgs/servers/metabase/default.nix +++ b/pkgs/servers/metabase/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "metabase-${version}"; - version = "0.28.1"; + version = "0.28.6"; - jar = fetchurl { + src = fetchurl { url = "http://downloads.metabase.com/v${version}/metabase.jar"; - sha256 = "1nv3y4pnvzd7lwyj14nmhr3k52qd8hilcjxvd7qr3hb7kzmjvbzk"; + sha256 = "1dzs57yyx6k93gvyva9y38xdb4pbvdliad3zzgk3vs74fp1zh2vq"; }; nativeBuildInputs = [ makeWrapper ]; @@ -14,13 +14,14 @@ stdenv.mkDerivation rec { unpackPhase = "true"; installPhase = '' - makeWrapper ${jre}/bin/java $out/bin/metabase --add-flags "-jar $jar" + makeWrapper ${jre}/bin/java $out/bin/metabase --add-flags "-jar $src" ''; meta = with stdenv.lib; { description = "The easy, open source way for everyone in your company to ask questions and learn from data."; - homepage = https://metabase.com; - license = licenses.agpl3; - maintainers = with maintainers; [ schneefux ]; + homepage = https://metabase.com; + license = licenses.agpl3; + platforms = platforms.all; + maintainers = with maintainers; [ schneefux thoughtpolice ]; }; } diff --git a/pkgs/servers/misc/client-ip-echo/client-ip-echo.nix b/pkgs/servers/misc/client-ip-echo/client-ip-echo.nix index 08c08d7d3c16..92bbc309ed3d 100644 --- a/pkgs/servers/misc/client-ip-echo/client-ip-echo.nix +++ b/pkgs/servers/misc/client-ip-echo/client-ip-echo.nix @@ -13,4 +13,5 @@ mkDerivation { executableHaskellDepends = [ base bytestring network ]; description = "accepts TCP connections and echoes the client's IP address back to it"; license = stdenv.lib.licenses.lgpl3; + broken = true; # 2018-04-10 } diff --git a/pkgs/servers/monitoring/munin/default.nix b/pkgs/servers/monitoring/munin/default.nix index 98e86bf8e36f..62fc3c6f8f55 100644 --- a/pkgs/servers/monitoring/munin/default.nix +++ b/pkgs/servers/monitoring/munin/default.nix @@ -3,14 +3,14 @@ }: stdenv.mkDerivation rec { - version = "2.0.34"; + version = "2.0.37"; name = "munin-${version}"; src = fetchFromGitHub { owner = "munin-monitoring"; repo = "munin"; rev = version; - sha256 = "0mb5m0nc3nr9781d3s99sjdssmvkv37gxyplzr6d73i4hi31m7fr"; + sha256 = "10niyzckx90dwdr4d7vj07d1qjy3nk7xzp30nqnlxzbaww7n5v78"; }; buildInputs = [ diff --git a/pkgs/servers/monitoring/prometheus/dovecot-exporter-deps.nix b/pkgs/servers/monitoring/prometheus/dovecot-exporter-deps.nix index d19d595f0668..c2dea18ee815 100644 --- a/pkgs/servers/monitoring/prometheus/dovecot-exporter-deps.nix +++ b/pkgs/servers/monitoring/prometheus/dovecot-exporter-deps.nix @@ -32,8 +32,8 @@ fetch = { type = "git"; url = "https://github.com/golang/protobuf"; - rev = "c65a0412e71e8b9b3bfd22925720d23c0f054237"; - sha256 = "1ch3czyzq5abl6zm1l0dfsi09xj43ql9jcbmbhfhxz954pw03v3v"; + rev = "bbd03ef6da3a115852eaf24c8a1c46aeb39aa175"; + sha256 = "1pyli3dcagi7jzpiazph4fhkz7a3z4bhd25nwbb7g0iy69b8z1g4"; }; } { @@ -50,8 +50,8 @@ fetch = { type = "git"; url = "https://github.com/prometheus/client_golang"; - rev = "06bc6e01f4baf4ee783ffcd23abfcb0b0f9dfada"; - sha256 = "0dvv21214sn702kc25y5l0gd9d11358976d3w31fgwx7456mjx26"; + rev = "c3324c1198cf3374996e9d3098edd46a6b55afc9"; + sha256 = "19qcz5bpzj5kqyhmbq5kxr8nrqqlszazzq6w0wldis1yk1wwww00"; }; } { @@ -68,8 +68,8 @@ fetch = { type = "git"; url = "https://github.com/prometheus/common"; - rev = "89604d197083d4781071d3c65855d24ecfb0a563"; - sha256 = "169rdlaf2mk9z4fydz7ajmngyhmf3q1lk96yhvx46bn986x5xkyn"; + rev = "e4aa40a9169a88835b849a6efb71e05dc04b88f0"; + sha256 = "0m1n616d694jca0qjwjn5ci7scfgm2jpi94dhi356arm9lhda4jc"; }; } { @@ -77,8 +77,8 @@ fetch = { type = "git"; url = "https://github.com/prometheus/procfs"; - rev = "cb4147076ac75738c9a7d279075a253c0cc5acbd"; - sha256 = "0zhlrik0f9q1lj6cisgnxgbz4darbcix52hm5abi24l2ahchf5ca"; + rev = "54d17b57dd7d4a3aa092476596b3f8a933bde349"; + sha256 = "1b5218hi6k9i637k6xc7ynpll577zbnrhjm9jr2iczy3j0rr4rvr"; }; } { diff --git a/pkgs/servers/monitoring/prometheus/dovecot-exporter.nix b/pkgs/servers/monitoring/prometheus/dovecot-exporter.nix index e7cdfa616b46..86f43116f746 100644 --- a/pkgs/servers/monitoring/prometheus/dovecot-exporter.nix +++ b/pkgs/servers/monitoring/prometheus/dovecot-exporter.nix @@ -1,17 +1,16 @@ { stdenv, buildGoPackage, fetchFromGitHub }: buildGoPackage rec { - name = "dovecot_exporter-unstable-${version}"; - version = "2018-01-18"; - rev = "4e831356533e2321031df73ebd25dd55dbd8d385"; + name = "dovecot_exporter-${version}"; + version = "0.1.1"; goPackagePath = "github.com/kumina/dovecot_exporter"; src = fetchFromGitHub { owner = "kumina"; repo = "dovecot_exporter"; - inherit rev; - sha256 = "0iky1i7m5mlknkhlpsxpjgigssg5m02nx5y7i4biddkqilfic74n"; + rev = version; + sha256 = "0i7nfgkb5jqdbgr16i29jdsvh69dx9qgn6nazpw78k0lgy7mpidn"; }; goDeps = ./dovecot-exporter-deps.nix; diff --git a/pkgs/servers/monitoring/prometheus/postfix-exporter-deps.nix b/pkgs/servers/monitoring/prometheus/postfix-exporter-deps.nix index ff35c0334275..194651f43326 100644 --- a/pkgs/servers/monitoring/prometheus/postfix-exporter-deps.nix +++ b/pkgs/servers/monitoring/prometheus/postfix-exporter-deps.nix @@ -5,8 +5,26 @@ fetch = { type = "git"; url = "https://github.com/beorn7/perks"; - rev = "4c0e84591b9aa9e6dcfdf3e020114cd81f89d5f9"; - sha256 = "1hrybsql68xw57brzj805xx2mghydpdiysv3gbhr7f5wlxj2514y"; + rev = "3a771d992973f24aa725d07868b467d1ddfceafb"; + sha256 = "1l2lns4f5jabp61201sh88zf3b0q793w4zdgp9nll7mmfcxxjif3"; + }; + } + { + goPackagePath = "github.com/coreos/go-systemd"; + fetch = { + type = "git"; + url = "https://github.com/coreos/go-systemd"; + rev = "d1b7d058aa2adfc795ad17ff4aaa2bc64ec11c78"; + sha256 = "1nz3v1b90hnmj2vjjwq96pr6psxlndqjyd30v9sgiwygzb7db9mv"; + }; + } + { + goPackagePath = "github.com/coreos/pkg"; + fetch = { + type = "git"; + url = "https://github.com/coreos/pkg"; + rev = "97fdf19511ea361ae1c100dd393cc47f8dcfa1e1"; + sha256 = "1srn87wih25l09f75483hnxsr8fc6rq3bk7w1x8125ym39p6mg21"; }; } { @@ -14,8 +32,8 @@ fetch = { type = "git"; url = "https://github.com/golang/protobuf"; - rev = "c65a0412e71e8b9b3bfd22925720d23c0f054237"; - sha256 = "1ch3czyzq5abl6zm1l0dfsi09xj43ql9jcbmbhfhxz954pw03v3v"; + rev = "e09c5db296004fbe3f74490e84dcd62c3c5ddb1b"; + sha256 = "1acnmalkqwrq6k3l71c4pyws0zn18r2609kqaq55lhbdcjgzid31"; }; } { @@ -32,8 +50,8 @@ fetch = { type = "git"; url = "https://github.com/prometheus/client_golang"; - rev = "06bc6e01f4baf4ee783ffcd23abfcb0b0f9dfada"; - sha256 = "0dvv21214sn702kc25y5l0gd9d11358976d3w31fgwx7456mjx26"; + rev = "82f5ff156b29e276022b1a958f7d385870fb9814"; + sha256 = "111j329yrlgvh73dm80gawwxsh9dgjkw74254kyj5c2rfmra7znz"; }; } { @@ -50,8 +68,8 @@ fetch = { type = "git"; url = "https://github.com/prometheus/common"; - rev = "89604d197083d4781071d3c65855d24ecfb0a563"; - sha256 = "169rdlaf2mk9z4fydz7ajmngyhmf3q1lk96yhvx46bn986x5xkyn"; + rev = "d0f7cd64bda49e08b22ae8a730aa57aa0db125d6"; + sha256 = "1d4hfbb66xsf0wq317fwhgrwakqzhvryw4d7ip851lwrpql5fqcx"; }; } { @@ -59,8 +77,8 @@ fetch = { type = "git"; url = "https://github.com/prometheus/procfs"; - rev = "cb4147076ac75738c9a7d279075a253c0cc5acbd"; - sha256 = "0zhlrik0f9q1lj6cisgnxgbz4darbcix52hm5abi24l2ahchf5ca"; + rev = "8b1c2da0d56deffdbb9e48d4414b4e674bd8083e"; + sha256 = "0x128p15h35mgwqxkigfkk1lfrcz9g697ahl8v6xp9kwvcqvjrrf"; }; } ] diff --git a/pkgs/servers/monitoring/prometheus/postfix-exporter.nix b/pkgs/servers/monitoring/prometheus/postfix-exporter.nix index 5438f8271d91..3c2f01c0a5ce 100644 --- a/pkgs/servers/monitoring/prometheus/postfix-exporter.nix +++ b/pkgs/servers/monitoring/prometheus/postfix-exporter.nix @@ -1,21 +1,28 @@ -{ stdenv, buildGoPackage, fetchFromGitHub }: +{ stdenv, buildGoPackage, fetchFromGitHub, systemd, makeWrapper }: buildGoPackage rec { - name = "postfix_exporter-unstable-${version}"; - version = "2017-06-01"; - rev = "a8b4bed735a03f234fcfffba85302f51025e6b1d"; + name = "postfix_exporter-${version}"; + version = "0.1.1"; goPackagePath = "github.com/kumina/postfix_exporter"; src = fetchFromGitHub { owner = "kumina"; repo = "postfix_exporter"; - inherit rev; - sha256 = "0rxvjpyjcvr1y8k8skq5f1bnl0mpgvaa04dn8c44v7afqnv78riy"; + rev = version; + sha256 = "1p2j66jzzgyv2w832pw57g02vrac6ldrblqllgwyy0i8krb3ibyz"; }; + nativeBuildInputs = [ makeWrapper ]; + buildInputs = [ systemd ]; + goDeps = ./postfix-exporter-deps.nix; + postInstall = '' + wrapProgram $bin/bin/postfix_exporter \ + --prefix LD_LIBRARY_PATH : "${systemd.lib}/lib" + ''; + meta = with stdenv.lib; { inherit (src.meta) homepage; description = "A Prometheus exporter for Postfix"; diff --git a/pkgs/servers/monitoring/telegraf/default.nix b/pkgs/servers/monitoring/telegraf/default.nix index e06aaa9faa47..b7879cc763aa 100644 --- a/pkgs/servers/monitoring/telegraf/default.nix +++ b/pkgs/servers/monitoring/telegraf/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "telegraf-${version}"; - version = "1.5.3"; + version = "1.6.1"; goPackagePath = "github.com/influxdata/telegraf"; @@ -12,7 +12,7 @@ buildGoPackage rec { owner = "influxdata"; repo = "telegraf"; rev = "${version}"; - sha256 = "0h3v80qvb9xmkmgbp46sqh76y4k84c0da586vdy3xmmbrbagnypv"; + sha256 = "0zc3bgs1ad392lqv72rkppxmk33b404b8jfx3wbzll7fklwxa8g2"; }; buildFlagsArray = [ ''-ldflags= diff --git a/pkgs/servers/monitoring/telegraf/deps-1.5.3.nix b/pkgs/servers/monitoring/telegraf/deps-1.6.1.nix index 916b4688a06e..fb98b8686cc2 100644 --- a/pkgs/servers/monitoring/telegraf/deps-1.5.3.nix +++ b/pkgs/servers/monitoring/telegraf/deps-1.6.1.nix @@ -185,8 +185,17 @@ fetch = { type = "git"; url = "https://github.com/eclipse/paho.mqtt.golang"; - rev = "d4f545eb108a2d19f9b1a735689dbfb719bc21fb"; - sha256 = "01cnca8y5caramqn6p8aigj6l5p6z0nrs2xqqv90658x584138kh"; + rev = "aff15770515e3c57fc6109da73d42b0d46f7f483"; + sha256 = "1blfvrp1d5jqxxqdw7xd0ns1qiml45k0nch9jwpi0ddg7hckii2d"; + }; + } + { + goPackagePath = "github.com/go-redis/redis"; + fetch = { + type = "git"; + url = "https://github.com/go-redis/redis"; + rev = "73b70592cdaa9e6abdfcfbf97b4a90d80728c836"; + sha256 = "0b6xwajnk65bdq98czv137gvypwnznkjnm2ksnxm87nyj2vyddm9"; }; } { @@ -257,8 +266,8 @@ fetch = { type = "git"; url = "https://github.com/influxdata/tail"; - rev = "a395bf99fe07c233f41fba0735fa2b13b58588ea"; - sha256 = "0bmkv932xhjpxwp8n74xy8wf34kiiknwq8agfbnz931apq6iw9b0"; + rev = "c43482518d410361b6c383d7aebce33d0471d7bc"; + sha256 = "0kf155nz9wvwawsbgaa76q4r975l7945nlvnh4ig60xm0jv8580b"; }; } { @@ -361,6 +370,15 @@ }; } { + goPackagePath = "github.com/nats-io/gnatsd"; + fetch = { + type = "git"; + url = "https://github.com/nats-io/gnatsd"; + rev = "393bbb7c031433e68707c8810fda0bfcfbe6ab9b"; + sha256 = "1hnn4p24gm90siixdvj97csrxnr78svxmypglcjska474adhhnzz"; + }; + } + { goPackagePath = "github.com/nats-io/go-nats"; fetch = { type = "git"; @@ -509,8 +527,8 @@ fetch = { type = "git"; url = "https://github.com/shirou/gopsutil"; - rev = "384a55110aa5ae052eb93ea94940548c1e305a99"; - sha256 = "00idmnsmalxhm1y60lhm9vyck1ay7gbp0r35fgs8bbiwq351bs23"; + rev = "a5c2888e464b14fa882c2a059e0f95716bd45cf1"; + sha256 = "1czzl00lxcyhmf6x7wmw3dxmnyqij8lcahn5mv325csgyym4vm4w"; }; } { @@ -518,8 +536,8 @@ fetch = { type = "git"; url = "https://github.com/soniah/gosnmp"; - rev = "5ad50dc75ab389f8a1c9f8a67d3a1cd85f67ed15"; - sha256 = "0dqz0w077xfk9fj5dd8xa6sqgdvjpb8vx997wnqpi3kbii1b9jnb"; + rev = "f15472a4cd6f6ea7929e4c7d9f163c49f059924f"; + sha256 = "1blhxq9sayfg7zih5rj0dg2qj9h10m6sbri57hxya9iz3jfgcx11"; }; } { @@ -536,8 +554,26 @@ fetch = { type = "git"; url = "https://github.com/stretchr/testify"; - rev = "4d4bfba8f1d1027c4fdbe371823030df51419987"; - sha256 = "1d3yz1d2s88byjzmn60jbi1m9s552f7ghzbzik97fbph37i8yjhp"; + rev = "12b6f73e6084dad08a7c6e575284b177ecafbc71"; + sha256 = "01f80s0q64pw5drfgqwwk1wfwwkvd2lhbs56lhhkff4ni83k73fd"; + }; + } + { + goPackagePath = "github.com/tidwall/gjson"; + fetch = { + type = "git"; + url = "https://github.com/tidwall/gjson"; + rev = "0623bd8fbdbf97cc62b98d15108832851a658e59"; + sha256 = "0g6rhilcmqpdvjdds7ykzhrlsjx234chf73l8sjah0rsd03207k0"; + }; + } + { + goPackagePath = "github.com/tidwall/match"; + fetch = { + type = "git"; + url = "https://github.com/tidwall/match"; + rev = "173748da739a410c5b0b813b956f89ff94730b4c"; + sha256 = "0a4hp323gnjam3nfxfljq7d24m7rgk5vxbscjmi3ik3ph78r5avg"; }; } { diff --git a/pkgs/servers/monitoring/zipkin/default.nix b/pkgs/servers/monitoring/zipkin/default.nix new file mode 100644 index 000000000000..2925a8f2dc53 --- /dev/null +++ b/pkgs/servers/monitoring/zipkin/default.nix @@ -0,0 +1,26 @@ +{stdenv, fetchurl, makeWrapper, jre}: +stdenv.mkDerivation rec { + version = "1.28.1"; + name = "zipkin-server-${version}"; + src = fetchurl { + url = "https://search.maven.org/remotecontent?filepath=io/zipkin/java/zipkin-server/${version}/zipkin-server-${version}-exec.jar"; + sha256 = "02369fkv0kbl1isq6y26fh2zj5wxv3zck522m5wypsjlcfcw2apa"; + }; + buildInputs = [ makeWrapper ]; + + buildCommand = + '' + mkdir -p $out/share/java + cp ${src} $out/share/java/zipkin-server-${version}-exec.jar + mkdir -p $out/bin + makeWrapper ${jre}/bin/java $out/bin/zipkin-server \ + --add-flags "-cp $out/share/java/zipkin-server-${version}-exec.jar org.springframework.boot.loader.JarLauncher" + ''; + meta = with stdenv.lib; { + description = "Zipkin distributed tracing system"; + homepage = "http://zipkin.io/"; + license = licenses.asl20; + platforms = platforms.unix; + maintainers = [ maintainers.hectorj ]; + }; +} diff --git a/pkgs/servers/nosql/arangodb/default.nix b/pkgs/servers/nosql/arangodb/default.nix index 9d1e62136651..d460284ef045 100644 --- a/pkgs/servers/nosql/arangodb/default.nix +++ b/pkgs/servers/nosql/arangodb/default.nix @@ -3,14 +3,14 @@ let in stdenv.mkDerivation rec { - version = "3.3.5"; + version = "3.3.7"; name = "arangodb-${version}"; src = fetchFromGitHub { repo = "arangodb"; owner = "arangodb"; rev = "v${version}"; - sha256 = "1015fi47m0j71l6wmp7n06qk0x2h3337sjqxfyan5dnnb0himzb6"; + sha256 = "1464nl2ampfkcd2kh1hmc18hh8ya73mjmxizm6wgl5yvkh56a82x"; }; buildInputs = [ diff --git a/pkgs/servers/sabnzbd/default.nix b/pkgs/servers/sabnzbd/default.nix index d46f5677b9f0..1b5a8c24424a 100644 --- a/pkgs/servers/sabnzbd/default.nix +++ b/pkgs/servers/sabnzbd/default.nix @@ -4,7 +4,7 @@ let pythonEnv = python2.withPackages(ps: with ps; [ cryptography cheetah yenc ]); path = stdenv.lib.makeBinPath [ par2cmdline unrar unzip p7zip ]; in stdenv.mkDerivation rec { - version = "2.3.2"; + version = "2.3.3"; pname = "sabnzbd"; name = "${pname}-${version}"; @@ -12,7 +12,7 @@ in stdenv.mkDerivation rec { owner = pname; repo = pname; rev = version; - sha256 = "0c0ap8bygvz643fgfvvmwshcyfblq2c5jziqwgpf30g6rsbfv2v0"; + sha256 = "0za4xjc4x44f7i30r86bbza3zppid333ifwzp5h526w3zak1lal8"; }; buildInputs = [ pythonEnv makeWrapper ]; diff --git a/pkgs/servers/search/elasticsearch/5.x.nix b/pkgs/servers/search/elasticsearch/5.x.nix index f46ca9c0cb3f..c80bbbcfde91 100644 --- a/pkgs/servers/search/elasticsearch/5.x.nix +++ b/pkgs/servers/search/elasticsearch/5.x.nix @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://artifacts.elastic.co/downloads/elasticsearch/${name}.tar.gz"; - sha256 = "0wjjvzjbdgdv9qznk1b8dx63zgs7s6jnrrbrnd5dn27lhymxiwpl"; + sha256 = "0sm99m4m4mmigj6ll22kyaw7zkp1s2i0mhzx15fzidnybdnlifb4"; }; patches = [ ./es-home-5.x.patch ./es-classpath-5.x.patch ]; diff --git a/pkgs/servers/search/elasticsearch/6.x.nix b/pkgs/servers/search/elasticsearch/6.x.nix index 5594fe35b737..06caf191587c 100644 --- a/pkgs/servers/search/elasticsearch/6.x.nix +++ b/pkgs/servers/search/elasticsearch/6.x.nix @@ -8,7 +8,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://artifacts.elastic.co/downloads/elasticsearch/${name}.tar.gz"; - sha256 = "03xwd8r0l0a29wl6wrp4bh7xr1b79q2rqfmsq3d5k35pv85sw3lw"; + sha256 = "13hf00khq33yw6zv022vcrsf6vm43isx40x7ww8r1lqx3vmg3rli"; }; patches = [ ./es-home-6.x.patch ]; @@ -27,8 +27,7 @@ stdenv.mkDerivation rec { wrapProgram $out/bin/elasticsearch \ --prefix PATH : "${utillinux}/bin/" \ - --set JAVA_HOME "${jre_headless}" \ - --set ES_JVM_OPTIONS "$out/config/jvm.options" + --set JAVA_HOME "${jre_headless}" wrapProgram $out/bin/elasticsearch-plugin --set JAVA_HOME "${jre_headless}" ''; diff --git a/pkgs/servers/search/groonga/default.nix b/pkgs/servers/search/groonga/default.nix index e3555d0076f6..063ad8c3f576 100644 --- a/pkgs/servers/search/groonga/default.nix +++ b/pkgs/servers/search/groonga/default.nix @@ -7,11 +7,11 @@ stdenv.mkDerivation rec { name = "groonga-${version}"; - version = "8.0.0"; + version = "8.0.1"; src = fetchurl { url = "http://packages.groonga.org/source/groonga/${name}.tar.gz"; - sha256 = "14il1biqpx5qs5dkmsrikw33pc8gj8scmr90y639wap87z5i3dcz"; + sha256 = "074r71dcv1l8rm6an7b8iyfpcxbk00iysmzszssknqg8mrqvsphg"; }; buildInputs = with stdenv.lib; diff --git a/pkgs/servers/shairport-sync/default.nix b/pkgs/servers/shairport-sync/default.nix index 79f2012c7a9f..f7a9fc658352 100644 --- a/pkgs/servers/shairport-sync/default.nix +++ b/pkgs/servers/shairport-sync/default.nix @@ -2,11 +2,11 @@ , libdaemon, popt, pkgconfig, libconfig, libpulseaudio, soxr }: stdenv.mkDerivation rec { - version = "3.0.2"; + version = "3.1.7"; name = "shairport-sync-${version}"; src = fetchFromGitHub { - sha256 = "1lpfl591lhk66a5jfp86j669iswjzj503x02hg9h3211vxv3h9pa"; + sha256 = "1ip8vlyly190fhcd55am5xvqisvch8mnw50xwbm663dapdb1f8ys"; rev = version; repo = "shairport-sync"; owner = "mikebrady"; diff --git a/pkgs/servers/sql/cockroachdb/default.nix b/pkgs/servers/sql/cockroachdb/default.nix index f40a5df0f5c0..aba997d75f13 100644 --- a/pkgs/servers/sql/cockroachdb/default.nix +++ b/pkgs/servers/sql/cockroachdb/default.nix @@ -1,16 +1,17 @@ -{ stdenv, buildGoPackage, fetchurl, cmake, xz, which, autoconf }: +{ stdenv, buildGoPackage, fetchurl, cmake, xz, which, autoconf, ncurses6, libedit }: buildGoPackage rec { name = "cockroach-${version}"; - version = "1.1.5"; + version = "2.0.0"; goPackagePath = "github.com/cockroachdb/cockroach"; src = fetchurl { url = "https://binaries.cockroachdb.com/cockroach-v${version}.src.tgz"; - sha256 = "0i2lg60424i1yg9dhapfsy3majnlbad2wlf93d9l161jf5lp9a2d"; + sha256 = "0x8hf5qwvgb2w6dcnvy20v77nf19f0l1pb40jf31rm72xhk3bwvy"; }; + buildInputs = [ (if stdenv.isDarwin then libedit else ncurses6) ]; nativeBuildInputs = [ cmake xz which autoconf ]; buildPhase = '' diff --git a/pkgs/servers/sql/mariadb/default.nix b/pkgs/servers/sql/mariadb/default.nix index 60462f83d108..a9de5508371a 100644 --- a/pkgs/servers/sql/mariadb/default.nix +++ b/pkgs/servers/sql/mariadb/default.nix @@ -123,7 +123,7 @@ everything = stdenv.mkDerivation (common // { buildInputs = common.buildInputs ++ [ xz lzo lz4 bzip2 snappy libxml2 boost judy libevent cracklib - ] ++ optional (stdenv.isLinux && !stdenv.isArm) numactl; + ] ++ optional (stdenv.isLinux && !stdenv.isAarch32) numactl; cmakeFlags = common.cmakeFlags ++ [ "-DMYSQL_DATADIR=/var/lib/mysql" diff --git a/pkgs/servers/sql/percona/5.6.x.nix b/pkgs/servers/sql/percona/5.6.x.nix index fc6c54f82c91..e440f11b2e44 100644 --- a/pkgs/servers/sql/percona/5.6.x.nix +++ b/pkgs/servers/sql/percona/5.6.x.nix @@ -57,5 +57,6 @@ stdenv.mkDerivation rec { platforms = platforms.linux; license = licenses.gpl2; maintainers = with maintainers; [ grahamc ]; + broken = true; # 2018-04-11 }; } diff --git a/pkgs/servers/sql/postgresql/default.nix b/pkgs/servers/sql/postgresql/default.nix index f7b894111e46..a2093962ea93 100644 --- a/pkgs/servers/sql/postgresql/default.nix +++ b/pkgs/servers/sql/postgresql/default.nix @@ -93,33 +93,33 @@ let in { postgresql93 = common { - version = "9.3.21"; + version = "9.3.22"; psqlSchema = "9.3"; - sha256 = "1q2038rvqa00rpk8sjbnwb19x64fcyjphw9x087432hq918vrfmr"; + sha256 = "06p9rk2bav41ybp8ra1bpf44avw9kl5s1wyql21n5awvlm5fs60v"; }; postgresql94 = common { - version = "9.4.16"; + version = "9.4.17"; psqlSchema = "9.4"; - sha256 = "10ay2cy3m4g66jwvxknc0f0w6mv2v7vm0dzkq92s9n7446v65g6w"; + sha256 = "1inpkwbr2xappz3kq3jr3hsn6mwn167nijcx406q8aq56p9hqcks"; }; postgresql95 = common { - version = "9.5.11"; + version = "9.5.12"; psqlSchema = "9.5"; - sha256 = "1pf8fwx8a6vn344b80a1bf2p4hjg06sh69kb2qwswxbsw9scv0l1"; + sha256 = "167nlrpsnqz63gafgn21j4yc2f5g1mpfkz8qxjxk2xs6crf6zs02"; }; postgresql96 = common { - version = "9.6.7"; + version = "9.6.8"; psqlSchema = "9.6"; - sha256 = "1ii4lrw8sncnz5g0fss1011shjhmbajzzhxx4f0bgsniq7rkvgif"; + sha256 = "0w7bwf19wbdd3jjbjv03cnx56qka4801srcbsayk9v792awv7zga"; }; postgresql100 = common { - version = "10.2"; + version = "10.3"; psqlSchema = "10.0"; - sha256 = "1bav2iyi93h866skrrlqlvsp4sfv1sfww1s305zpzffxcadh0cpy"; + sha256 = "06lkcwsf851z49zqcws5yc77s2yrbaazf2nvbk38hpp31rw6i8kf"; }; } diff --git a/pkgs/servers/sql/postgresql/pgroonga/default.nix b/pkgs/servers/sql/postgresql/pgroonga/default.nix index 1f612116ae3a..eb6f5f94810e 100644 --- a/pkgs/servers/sql/postgresql/pgroonga/default.nix +++ b/pkgs/servers/sql/postgresql/pgroonga/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "pgroonga-${version}"; - version = "2.0.4"; + version = "2.0.5"; src = fetchurl { url = "http://packages.groonga.org/source/pgroonga/${name}.tar.gz"; - sha256 = "0hx7bzxmjv0rsvv6b77gpmwhw4ajy8sgjbmrg7hj3dc51kiyiai0"; + sha256 = "1c4m1rg3122y8rndgz7sj9a49l3v9nm0qbpa04pls20pxzx21g5a"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/servers/uftp/default.nix b/pkgs/servers/uftp/default.nix index 40bcbc50f0ca..d1ec31d6b856 100644 --- a/pkgs/servers/uftp/default.nix +++ b/pkgs/servers/uftp/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "uftp-${version}"; - version = "4.9.5"; + version = "4.9.6"; src = fetchurl { url = "mirror://sourceforge/uftp-multicast/source-tar/uftp-${version}.tar.gz"; - sha256 = "1alsha0mhscp0jha2wlb5mqqkx2967s7rpm0x8c2v7jws1d0m1w3"; + sha256 = "0byg7ff39i32ljzqxn6rhiz3zs1b04y50xpvzmjx5v8pmdajn0sz"; }; buildInputs = [ openssl ]; diff --git a/pkgs/servers/web-apps/fileshelter/default.nix b/pkgs/servers/web-apps/fileshelter/default.nix index 1adb3a70ccf1..d0be4f575dd6 100644 --- a/pkgs/servers/web-apps/fileshelter/default.nix +++ b/pkgs/servers/web-apps/fileshelter/default.nix @@ -11,6 +11,8 @@ stdenv.mkDerivation rec { sha256 = "1n9hrls3l9gf8wfz6m9bylma1b1hdvdqsksv2dlp1zdgjdzv200b"; }; + enableParallelBuilding = true; + nativeBuildInputs = [ autoreconfHook pkgconfig ]; buildInputs = [ libzip boost wt3 libconfig ]; diff --git a/pkgs/servers/x11/xorg/default.nix b/pkgs/servers/x11/xorg/default.nix index f5d7f54eb5ca..07faa8d3cc7e 100644 --- a/pkgs/servers/x11/xorg/default.nix +++ b/pkgs/servers/x11/xorg/default.nix @@ -2570,6 +2570,9 @@ let url = mirror://xorg/individual/util/xorg-cf-files-1.0.6.tar.bz2; sha256 = "0kckng0zs1viz0nr84rdl6dswgip7ndn4pnh5nfwnviwpsfmmksd"; }; + postInstall = stdenv.lib.optionalString stdenv.isDarwin '' + substituteInPlace $out/lib/X11/config/darwin.cf --replace "/usr/bin/" "" + ''; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ ]; meta.platforms = stdenv.lib.platforms.unix; diff --git a/pkgs/servers/x11/xorg/overrides.nix b/pkgs/servers/x11/xorg/overrides.nix index 55eb54622d51..5efa4bfcfd5d 100644 --- a/pkgs/servers/x11/xorg/overrides.nix +++ b/pkgs/servers/x11/xorg/overrides.nix @@ -512,6 +512,8 @@ in "--with-xkb-path=${xorg.xkeyboardconfig}/share/X11/xkb" "--with-xkb-output=$out/share/X11/xkb/compiled" "--enable-glamor" + ] ++ lib.optionals stdenv.hostPlatform.isMusl [ + "--disable-tls" ]; postInstall = '' rm -fr $out/share/X11/xkb/compiled # otherwise X will try to write in it diff --git a/pkgs/shells/bash-completion/default.nix b/pkgs/shells/bash/bash-completion/default.nix index b5f600da8f7e..b5f600da8f7e 100644 --- a/pkgs/shells/bash-completion/default.nix +++ b/pkgs/shells/bash/bash-completion/default.nix diff --git a/pkgs/shells/nix-bash-completions/default.nix b/pkgs/shells/bash/nix-bash-completions/default.nix index 739dbd538a6e..b76e65ca8719 100644 --- a/pkgs/shells/nix-bash-completions/default.nix +++ b/pkgs/shells/bash/nix-bash-completions/default.nix @@ -1,14 +1,14 @@ { stdenv, fetchFromGitHub }: stdenv.mkDerivation rec { - version = "0.6.5"; + version = "0.6.6"; name = "nix-bash-completions-${version}"; src = fetchFromGitHub { owner = "hedning"; repo = "nix-bash-completions"; rev = "v${version}"; - sha256 = "10f70jw81vky52s3fidf7vzl725fihiypsw39825wnkpynayhmrg"; + sha256 = "1lz9cgacyd4cphr7l90x4hn0ifhxwzz2d5829w1jcglasfacfpsw"; }; # To enable lazy loading via. bash-completion we need a symlink to the script diff --git a/pkgs/shells/fish-foreign-env/default.nix b/pkgs/shells/fish/fish-foreign-env/default.nix index 445e961c6499..445e961c6499 100644 --- a/pkgs/shells/fish-foreign-env/default.nix +++ b/pkgs/shells/fish/fish-foreign-env/default.nix diff --git a/pkgs/shells/fish-foreign-env/suppress-harmless-warnings.patch b/pkgs/shells/fish/fish-foreign-env/suppress-harmless-warnings.patch index 5e4569f0a15c..5e4569f0a15c 100644 --- a/pkgs/shells/fish-foreign-env/suppress-harmless-warnings.patch +++ b/pkgs/shells/fish/fish-foreign-env/suppress-harmless-warnings.patch diff --git a/pkgs/shells/xonsh/default.nix b/pkgs/shells/xonsh/default.nix index d22a66eb93ae..a923602cdd76 100644 --- a/pkgs/shells/xonsh/default.nix +++ b/pkgs/shells/xonsh/default.nix @@ -2,13 +2,13 @@ python3Packages.buildPythonApplication rec { name = "xonsh-${version}"; - version = "0.6.0"; + version = "0.6.1"; src = fetchFromGitHub { owner = "scopatz"; repo = "xonsh"; rev = version; - sha256= "0hfsan22i81wffx2xbamm8wwkxgpv12z4kfl37p9m22vpqgg0fdg"; + sha256= "0lxjklwj267q0ikqab8p743sjvm44gq1w7mp80c7hgrn2ndvrypg"; }; LC_ALL = "en_US.UTF-8"; @@ -34,7 +34,7 @@ python3Packages.buildPythonApplication rec { meta = with stdenv.lib; { description = "A Python-ish, BASHwards-compatible shell"; - homepage = http://xonsh.org; + homepage = http://xon.sh/; license = licenses.bsd3; maintainers = with maintainers; [ spwhitt garbas vrthra ]; platforms = platforms.all; diff --git a/pkgs/shells/antigen/default.nix b/pkgs/shells/zsh/antigen/default.nix index cf22207ef09c..cf22207ef09c 100644 --- a/pkgs/shells/antigen/default.nix +++ b/pkgs/shells/zsh/antigen/default.nix diff --git a/pkgs/shells/zsh/default.nix b/pkgs/shells/zsh/default.nix index c68a1bb2784d..3259dbbd9bc6 100644 --- a/pkgs/shells/zsh/default.nix +++ b/pkgs/shells/zsh/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, ncurses, pcre }: let - version = "5.5"; + version = "5.5.1"; documentation = fetchurl { url = "mirror://sourceforge/zsh/zsh-${version}-doc.tar.gz"; - sha256 = "1k56ancx1xxniih8i1gmfhhmmk965jk8wfjdfkynnxfi4pkqy2gc"; + sha256 = "0bm9n7lycdzvw5hmgi4a920pqbb5yxvmyhfxx8jbign2hzgf7g01"; }; in @@ -15,7 +15,7 @@ stdenv.mkDerivation { src = fetchurl { url = "mirror://sourceforge/zsh/zsh-${version}.tar.gz"; - sha256 = "0nf1cwjgdncz9bln1fdz7m6rlgf8qjy2v01871ifhak78njhcmnh"; + sha256 = "10705qnnr3p416bwfjaip9r7yw187vczzjrk60yg79dfwy4slk3p"; }; buildInputs = [ ncurses pcre ]; diff --git a/pkgs/shells/grml-zsh-config/default.nix b/pkgs/shells/zsh/grml-zsh-config/default.nix index 635077a611cf..e516393a23ca 100644 --- a/pkgs/shells/grml-zsh-config/default.nix +++ b/pkgs/shells/zsh/grml-zsh-config/default.nix @@ -5,13 +5,13 @@ with lib; stdenv.mkDerivation rec { name = "grml-zsh-config-${version}"; - version = "0.14.2"; + version = "0.14.3"; src = fetchFromGitHub { owner = "grml"; repo = "grml-etc-core"; rev = "v${version}"; - sha256 = "1xvv2mnkfqa657w8y4q2zrchhindngdzij9fbalcg1gggz4zdwcm"; + sha256 = "1akx6lwxnbcccddzw41rci8rb9n5vb6q2vpn5qr07f0grchyiifk"; }; buildInputs = [ zsh coreutils txt2tags procps ] diff --git a/pkgs/shells/lambda-mod-zsh-theme/default.nix b/pkgs/shells/zsh/lambda-mod-zsh-theme/default.nix index 6dea51a487e9..6dea51a487e9 100644 --- a/pkgs/shells/lambda-mod-zsh-theme/default.nix +++ b/pkgs/shells/zsh/lambda-mod-zsh-theme/default.nix diff --git a/pkgs/shells/nix-zsh-completions/default.nix b/pkgs/shells/zsh/nix-zsh-completions/default.nix index 2bcff6b809dc..8e15476451a8 100644 --- a/pkgs/shells/nix-zsh-completions/default.nix +++ b/pkgs/shells/zsh/nix-zsh-completions/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchFromGitHub }: let - version = "0.3.8"; + version = "0.3.9"; in stdenv.mkDerivation rec { @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { owner = "spwhitt"; repo = "nix-zsh-completions"; rev = "${version}"; - sha256 = "05ynd38br2kn657g7l01jg1q8ja9xwrdyb95w02gh7j9cww2k06w"; + sha256 = "1ysc9g72yj63ygm915a316f1hcklmgswyrwsq5abwwj48001y01n"; }; installPhase = '' diff --git a/pkgs/shells/oh-my-zsh/default.nix b/pkgs/shells/zsh/oh-my-zsh/default.nix index 8cfcb9ecbbea..5412f4ce8967 100644 --- a/pkgs/shells/oh-my-zsh/default.nix +++ b/pkgs/shells/zsh/oh-my-zsh/default.nix @@ -4,13 +4,13 @@ { stdenv, fetchgit }: stdenv.mkDerivation rec { - version = "2018-01-22"; + version = "2018-04-06"; name = "oh-my-zsh-${version}"; src = fetchgit { url = "https://github.com/robbyrussell/oh-my-zsh"; - rev = "37c2d0ddd751e15d0c87a51e2d9f9849093571dc"; - sha256 = "0x2r7205ps5v5bl1f9vdnry9gxflypaahz49cnhq5f5klb49bakn"; + rev = "62b8a70a7c5d0c939d8dabfef48796a092d1a55f"; + sha256 = "02na47pa2ly17yvwa2nhzyrp8iarawyirhfw3779sh0w78vgw1gs"; }; pathsToLink = [ "/share/oh-my-zsh" ]; diff --git a/pkgs/shells/zsh-autosuggestions/default.nix b/pkgs/shells/zsh/zsh-autosuggestions/default.nix index 906301110e96..906301110e96 100644 --- a/pkgs/shells/zsh-autosuggestions/default.nix +++ b/pkgs/shells/zsh/zsh-autosuggestions/default.nix diff --git a/pkgs/shells/zsh-command-time/default.nix b/pkgs/shells/zsh/zsh-command-time/default.nix index 453a57744071..453a57744071 100644 --- a/pkgs/shells/zsh-command-time/default.nix +++ b/pkgs/shells/zsh/zsh-command-time/default.nix diff --git a/pkgs/shells/zsh-completions/default.nix b/pkgs/shells/zsh/zsh-completions/default.nix index 92a9d293e84f..92a9d293e84f 100644 --- a/pkgs/shells/zsh-completions/default.nix +++ b/pkgs/shells/zsh/zsh-completions/default.nix diff --git a/pkgs/shells/zsh-deer/default.nix b/pkgs/shells/zsh/zsh-deer/default.nix index 735d6a2b7619..735d6a2b7619 100644 --- a/pkgs/shells/zsh-deer/default.nix +++ b/pkgs/shells/zsh/zsh-deer/default.nix diff --git a/pkgs/shells/zsh-deer/realpath.patch b/pkgs/shells/zsh/zsh-deer/realpath.patch index 03850d7e5c12..03850d7e5c12 100644 --- a/pkgs/shells/zsh-deer/realpath.patch +++ b/pkgs/shells/zsh/zsh-deer/realpath.patch diff --git a/pkgs/shells/zsh-git-prompt/default.nix b/pkgs/shells/zsh/zsh-git-prompt/default.nix index 7318da83d176..7318da83d176 100644 --- a/pkgs/shells/zsh-git-prompt/default.nix +++ b/pkgs/shells/zsh/zsh-git-prompt/default.nix diff --git a/pkgs/shells/zsh-powerlevel9k/default.nix b/pkgs/shells/zsh/zsh-powerlevel9k/default.nix index 2babf35f2b68..2babf35f2b68 100644 --- a/pkgs/shells/zsh-powerlevel9k/default.nix +++ b/pkgs/shells/zsh/zsh-powerlevel9k/default.nix diff --git a/pkgs/shells/zsh-prezto/default.nix b/pkgs/shells/zsh/zsh-prezto/default.nix index 7bef904081e0..7bef904081e0 100644 --- a/pkgs/shells/zsh-prezto/default.nix +++ b/pkgs/shells/zsh/zsh-prezto/default.nix diff --git a/pkgs/shells/zsh-syntax-highlighting/default.nix b/pkgs/shells/zsh/zsh-syntax-highlighting/default.nix index b7b44098fd7a..b7b44098fd7a 100644 --- a/pkgs/shells/zsh-syntax-highlighting/default.nix +++ b/pkgs/shells/zsh/zsh-syntax-highlighting/default.nix diff --git a/pkgs/stdenv/cross/default.nix b/pkgs/stdenv/cross/default.nix index 6e3065718532..973be9831861 100644 --- a/pkgs/stdenv/cross/default.nix +++ b/pkgs/stdenv/cross/default.nix @@ -39,8 +39,8 @@ in lib.init bootStages ++ [ buildPlatform = localSystem; hostPlatform = crossSystem; targetPlatform = crossSystem; - cc = if crossSystem.useiOSCross or false - then buildPackages.darwin.ios-cross + cc = if crossSystem.useiOSPrebuilt or false + then buildPackages.darwin.iosSdkPkgs.clang else if crossSystem.useAndroidPrebuilt then buildPackages.androidenv.androidndkPkgs.gcc else buildPackages.gcc; diff --git a/pkgs/stdenv/cygwin/rebase-x86_64.sh b/pkgs/stdenv/cygwin/rebase-x86_64.sh index 77adc52d53b6..4c8f8ebd7eb2 100644 --- a/pkgs/stdenv/cygwin/rebase-x86_64.sh +++ b/pkgs/stdenv/cygwin/rebase-x86_64.sh @@ -8,7 +8,7 @@ _cygwinFixAutoImageBase() { if [ -f /etc/rebasenix.nextbase ]; then NEXTBASE="$(</etc/rebasenix.nextbase)" fi - NEXTBASE=${NEXTBASE:-0x200000000} + NEXTBASE=${NEXTBASE:-0x200000001} REBASE=(`/bin/rebase -i $DLL`) BASE=${REBASE[2]} diff --git a/pkgs/stdenv/generic/check-meta.nix b/pkgs/stdenv/generic/check-meta.nix index 26522ad6045e..1350e7d37301 100644 --- a/pkgs/stdenv/generic/check-meta.nix +++ b/pkgs/stdenv/generic/check-meta.nix @@ -8,7 +8,8 @@ let # for why this defaults to false, but I (@copumpkin) want to default it to true soon. shouldCheckMeta = config.checkMeta or false; - allowUnfree = config.allowUnfree or false || builtins.getEnv "NIXPKGS_ALLOW_UNFREE" == "1"; + allowUnfree = config.allowUnfree or false + || builtins.getEnv "NIXPKGS_ALLOW_UNFREE" == "1"; whitelist = config.whitelistedLicenses or []; blacklist = config.blacklistedLicenses or []; @@ -35,9 +36,11 @@ let hasBlacklistedLicense = assert areLicenseListsValid; attrs: hasLicense attrs && builtins.elem attrs.meta.license blacklist; - allowBroken = config.allowBroken or false || builtins.getEnv "NIXPKGS_ALLOW_BROKEN" == "1"; + allowBroken = config.allowBroken or false + || builtins.getEnv "NIXPKGS_ALLOW_BROKEN" == "1"; - allowUnsupportedSystem = config.allowUnsupportedSystem or false; + allowUnsupportedSystem = config.allowUnsupportedSystem or false + || builtins.getEnv "NIXPKGS_ALLOW_UNSUPPORTED_SYSTEM" == "1"; isUnfree = licenses: lib.lists.any (l: !l.free or true || l == "unfree" || l == "unfree-redistributable") licenses; @@ -75,6 +78,7 @@ let remediation = { unfree = remediate_whitelist "Unfree"; broken = remediate_whitelist "Broken"; + unsupported = remediate_whitelist "UnsupportedSystem"; blacklisted = x: ""; insecure = remediate_insecure; unknown-meta = x: ""; @@ -144,7 +148,7 @@ let license = either (listOf lib.types.attrs) (either lib.types.attrs str); maintainers = listOf (attrsOf str); priority = int; - platforms = listOf (either str lib.systems.parsed.types.system); + platforms = listOf (either str lib.systems.parsedPlatform.types.system); hydraPlatforms = listOf str; broken = bool; @@ -192,8 +196,8 @@ let { valid = false; reason = "blacklisted"; errormsg = "has a blacklisted license (‘${showLicense attrs.meta.license}’)"; } else if !allowBroken && attrs.meta.broken or false then { valid = false; reason = "broken"; errormsg = "is marked as broken"; } - else if !allowUnsupportedSystem && !allowBroken && !(checkPlatform attrs) then - { valid = false; reason = "broken"; errormsg = "is not supported on ‘${hostPlatform.config}’"; } + else if !allowUnsupportedSystem && !(checkPlatform attrs) then + { valid = false; reason = "unsupported"; errormsg = "is not supported on ‘${hostPlatform.config}’"; } else if !(hasAllowedInsecure attrs) then { valid = false; reason = "insecure"; errormsg = "is marked as insecure"; } else let res = checkMeta (attrs.meta or {}); in if res != [] then diff --git a/pkgs/stdenv/generic/default.nix b/pkgs/stdenv/generic/default.nix index 42288e6245e4..190fc500068c 100644 --- a/pkgs/stdenv/generic/default.nix +++ b/pkgs/stdenv/generic/default.nix @@ -117,7 +117,7 @@ let # Utility flags to test the type of platform. inherit (hostPlatform) isDarwin isLinux isSunOS isHurd isCygwin isFreeBSD isOpenBSD - isi686 isx86_64 is64bit isArm isAarch64 isMips isBigEndian; + isi686 isx86_64 is64bit isAarch32 isAarch64 isMips isBigEndian; # Whether we should run paxctl to pax-mark binaries. needsPax = isLinux; diff --git a/pkgs/stdenv/linux/bootstrap-tools-musl/scripts/unpack-bootstrap-tools.sh b/pkgs/stdenv/linux/bootstrap-tools-musl/scripts/unpack-bootstrap-tools.sh index 8b5070dc6d6f..b160a748d8dc 100644 --- a/pkgs/stdenv/linux/bootstrap-tools-musl/scripts/unpack-bootstrap-tools.sh +++ b/pkgs/stdenv/linux/bootstrap-tools-musl/scripts/unpack-bootstrap-tools.sh @@ -26,7 +26,7 @@ for i in $out/bin/* $out/libexec/gcc/*/*/*; do ./patchelf --set-interpreter $LD_BINARY --set-rpath $out/lib --force-rpath "$i" done -for i in $out/lib/libiconv*.so $out/lib/libpcre* $out/lib/libc.so; do +for i in $out/lib/libpcre* $out/lib/libc.so; do if [ -L "$i" ]; then continue; fi echo patching "$i" $out/bin/patchelf --set-rpath $out/lib --force-rpath "$i" diff --git a/pkgs/stdenv/linux/default.nix b/pkgs/stdenv/linux/default.nix index 2eb55ae439b5..92da0d7873d0 100644 --- a/pkgs/stdenv/linux/default.nix +++ b/pkgs/stdenv/linux/default.nix @@ -362,7 +362,6 @@ in ++ [ /*propagated from .dev*/ linuxHeaders binutils gcc gcc.cc gcc.cc.lib gcc.expand-response-params ] - ++ lib.optional (localSystem.libc == "musl") libiconv ++ lib.optionals localSystem.isAarch64 [ prevStage.updateAutotoolsGnuConfigScriptsHook prevStage.gnu-config ]; diff --git a/pkgs/stdenv/linux/make-bootstrap-tools.nix b/pkgs/stdenv/linux/make-bootstrap-tools.nix index 5522bc5dea25..4fc9999b538c 100644 --- a/pkgs/stdenv/linux/make-bootstrap-tools.nix +++ b/pkgs/stdenv/linux/make-bootstrap-tools.nix @@ -136,8 +136,6 @@ in with pkgs; rec { cp -d ${libmpc.out}/lib/libmpc*.so* $out/lib cp -d ${zlib.out}/lib/libz.so* $out/lib cp -d ${libelf}/lib/libelf.so* $out/lib - '' + lib.optionalString (hostPlatform.libc == "musl") '' - cp -d ${libiconv.out}/lib/libiconv*.so* $out/lib '' + lib.optionalString (hostPlatform != buildPlatform) '' # These needed for cross but not native tools because the stdenv diff --git a/pkgs/stdenv/native/default.nix b/pkgs/stdenv/native/default.nix index 19efac3700a6..78f7a82d2952 100644 --- a/pkgs/stdenv/native/default.nix +++ b/pkgs/stdenv/native/default.nix @@ -119,14 +119,23 @@ in }; stdenvNoCC = stdenv; - cc = import ../../build-support/cc-wrapper { - name = "cc-native"; - nativeTools = true; - nativeLibc = true; + cc = let nativePrefix = { # switch "i686-solaris" = "/usr/gnu"; "x86_64-solaris" = "/opt/local/gcc47"; }.${system} or "/usr"; + in + import ../../build-support/cc-wrapper { + name = "cc-native"; + nativeTools = true; + nativeLibc = true; + inherit nativePrefix; + bintools = import ../../build-support/bintools-wrapper { + name = "bintools"; + inherit stdenvNoCC nativePrefix; + nativeTools = true; + nativeLibc = true; + }; inherit stdenvNoCC; }; diff --git a/pkgs/tools/X11/xpra/default.nix b/pkgs/tools/X11/xpra/default.nix index b931f270dee2..9bc13b3260da 100644 --- a/pkgs/tools/X11/xpra/default.nix +++ b/pkgs/tools/X11/xpra/default.nix @@ -12,11 +12,11 @@ let inherit (python2Packages) python cython buildPythonApplication; in buildPythonApplication rec { name = "xpra-${version}"; - version = "2.2.5"; + version = "2.2.6"; src = fetchurl { url = "http://xpra.org/src/${name}.tar.xz"; - sha256 = "1q2l00nc3bgwlhjzkbk4a8x2l8z9w1799yn31icsx5hrgh98a1js"; + sha256 = "1zyynghhzjbgnmzcibm17wpj9f7jy31d7dr373li8cwg2yl2swyz"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/admin/ansible/2.5.nix b/pkgs/tools/admin/ansible/2.5.nix new file mode 100644 index 000000000000..32d83861cd8c --- /dev/null +++ b/pkgs/tools/admin/ansible/2.5.nix @@ -0,0 +1,40 @@ +{ stdenv +, fetchurl +, pythonPackages +, windowsSupport ? false +}: + +pythonPackages.buildPythonPackage rec { + pname = "ansible"; + version = "2.5.1"; + name = "${pname}-${version}"; + + src = fetchurl { + url = "http://releases.ansible.com/ansible/${name}.tar.gz"; + sha256 = "06h0cmz0cgj1xszzn6rsypfc8lkazgh5g1yxyss1yx242d0wkw2i"; + }; + + prePatch = '' + sed -i "s,/usr/,$out," lib/ansible/constants.py + ''; + + doCheck = false; + dontStrip = true; + dontPatchELF = true; + dontPatchShebangs = false; + + propagatedBuildInputs = with pythonPackages; [ + pycrypto paramiko jinja2 pyyaml httplib2 boto six netaddr dnspython + ] ++ stdenv.lib.optional windowsSupport pywinrm; + + meta = with stdenv.lib; { + homepage = http://www.ansible.com; + description = "A simple automation tool"; + license = with licenses; [ gpl3 ]; + maintainers = with maintainers; [ + jgeerds + joamaki + ]; + platforms = with platforms; linux ++ darwin; + }; +} diff --git a/pkgs/tools/admin/certbot/default.nix b/pkgs/tools/admin/certbot/default.nix index bf2b4ac6799d..3106552a6610 100644 --- a/pkgs/tools/admin/certbot/default.nix +++ b/pkgs/tools/admin/certbot/default.nix @@ -4,13 +4,13 @@ pythonPackages.buildPythonApplication rec { name = "certbot-${version}"; - version = "0.22.2"; + version = "0.23.0"; src = fetchFromGitHub { owner = "certbot"; repo = "certbot"; rev = "v${version}"; - sha256 = "08x80x9d71j84mwjm5wzd0x5gcw6gwyvkvadi2js39js6hfnc6jg"; + sha256 = "0dv9d1byppnvx54rhi2w3gqjk01444m5hbr9553n9gin4ribviii"; }; propagatedBuildInputs = with pythonPackages; [ diff --git a/pkgs/tools/admin/fastlane/Gemfile.lock b/pkgs/tools/admin/fastlane/Gemfile.lock index a578bb4bca27..9cb80eb131c0 100644 --- a/pkgs/tools/admin/fastlane/Gemfile.lock +++ b/pkgs/tools/admin/fastlane/Gemfile.lock @@ -1,7 +1,7 @@ GEM remote: https://rubygems.org/ specs: - CFPropertyList (2.3.6) + CFPropertyList (3.0.0) addressable (2.5.2) public_suffix (>= 2.0.2, < 4.0) atomos (0.1.2) @@ -9,14 +9,15 @@ GEM claide (1.0.2) colored (1.2) colored2 (3.1.2) - commander-fastlane (4.4.5) + commander-fastlane (4.4.6) highline (~> 1.7.2) declarative (0.0.10) declarative-option (0.1.0) domain_name (0.5.20170404) unf (>= 0.0.5, < 1.0.0) - dotenv (2.2.1) - excon (0.60.0) + dotenv (2.2.2) + emoji_regex (0.1.1) + excon (0.62.0) faraday (0.14.0) multipart-post (>= 1.2, < 3) faraday-cookie_jar (0.0.6) @@ -25,20 +26,21 @@ GEM faraday_middleware (0.12.2) faraday (>= 0.7.4, < 1.0) fastimage (2.1.1) - fastlane (2.80.0) + fastlane (2.91.0) CFPropertyList (>= 2.3, < 4.0.0) addressable (>= 2.3, < 3.0.0) babosa (>= 1.0.2, < 2.0.0) bundler (>= 1.12.0, < 2.0.0) colored - commander-fastlane (>= 4.4.5, < 5.0.0) + commander-fastlane (>= 4.4.6, < 5.0.0) dotenv (>= 2.1.1, < 3.0.0) + emoji_regex (~> 0.1) excon (>= 0.45.0, < 1.0.0) faraday (~> 0.9) faraday-cookie_jar (~> 0.0.6) faraday_middleware (~> 0.9) fastimage (>= 2.1.0, < 3.0.0) - gh_inspector (>= 1.0.1, < 2.0.0) + gh_inspector (>= 1.1.2, < 2.0.0) google-api-client (>= 0.13.1, < 0.14.0) highline (>= 1.7.2, < 2.0.0) json (< 3.0.0) @@ -50,16 +52,17 @@ GEM public_suffix (~> 2.0.0) rubyzip (>= 1.1.0, < 2.0.0) security (= 0.1.3) + simctl (~> 1.6.3) slack-notifier (>= 2.0.0, < 3.0.0) terminal-notifier (>= 1.6.2, < 2.0.0) terminal-table (>= 1.4.5, < 2.0.0) tty-screen (>= 0.6.3, < 1.0.0) tty-spinner (>= 0.8.0, < 1.0.0) word_wrap (~> 1.0.0) - xcodeproj (>= 1.5.2, < 2.0.0) + xcodeproj (>= 1.5.7, < 2.0.0) xcpretty (>= 0.2.4, < 1.0.0) xcpretty-travis-formatter (>= 0.0.3) - gh_inspector (1.1.1) + gh_inspector (1.1.3) google-api-client (0.13.6) addressable (~> 2.5, >= 2.5.1) googleauth (~> 0.5) @@ -93,7 +96,8 @@ GEM multi_json (1.13.1) multi_xml (0.6.0) multipart-post (2.0.0) - nanaimo (0.2.3) + nanaimo (0.2.5) + naturally (2.1.0) os (0.9.6) plist (3.4.0) public_suffix (2.0.5) @@ -110,6 +114,9 @@ GEM faraday (~> 0.9) jwt (>= 1.5, < 3.0) multi_json (~> 1.10) + simctl (1.6.3) + CFPropertyList + naturally slack-notifier (2.3.2) terminal-notifier (1.8.0) terminal-table (1.8.0) @@ -121,15 +128,15 @@ GEM uber (0.1.0) unf (0.1.4) unf_ext - unf_ext (0.0.7.4) + unf_ext (0.0.7.5) unicode-display_width (1.3.0) word_wrap (1.0.0) - xcodeproj (1.5.6) - CFPropertyList (~> 2.3.3) + xcodeproj (1.5.7) + CFPropertyList (>= 2.3.3, < 4.0) atomos (~> 0.1.2) claide (>= 1.0.2, < 2.0) colored2 (~> 3.1) - nanaimo (~> 0.2.3) + nanaimo (~> 0.2.4) xcpretty (0.2.8) rouge (~> 2.0.7) xcpretty-travis-formatter (1.0.0) diff --git a/pkgs/tools/admin/fastlane/gemset.nix b/pkgs/tools/admin/fastlane/gemset.nix index c9ddb7b77c04..4a0d0467d804 100644 --- a/pkgs/tools/admin/fastlane/gemset.nix +++ b/pkgs/tools/admin/fastlane/gemset.nix @@ -27,10 +27,10 @@ CFPropertyList = { source = { remotes = ["https://rubygems.org"]; - sha256 = "0hadm41xr1fq3qp74jd9l5q8l0j9083rgklgzsilllwaav7qrrid"; + sha256 = "0ykjag3k5msz3sf1j91rb55da2xh596y06m3a4yl79fiy2id0w9z"; type = "gem"; }; - version = "2.3.6"; + version = "3.0.0"; }; claide = { source = { @@ -60,10 +60,10 @@ dependencies = ["highline"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "04gpg733wv878acvrzp4kc3k934v10l3v8bcz3fjq5imjsrjdnbp"; + sha256 = "0y8d3ac9qwm1cg6rnpf8rcdsy1yxacrd2g2kl809xsp2vi973g65"; type = "gem"; }; - version = "4.4.5"; + version = "4.4.6"; }; declarative = { source = { @@ -93,18 +93,26 @@ dotenv = { source = { remotes = ["https://rubygems.org"]; - sha256 = "1pgzlvs0sswnqlgfm9gkz2hlhkc0zd3vnlp2vglb1wbgnx37pjjv"; + sha256 = "1f9s04xwa9gcsql734nwxvacgsl1si7xka4g4w3r6d3ab8a274y9"; type = "gem"; }; - version = "2.2.1"; + version = "2.2.2"; + }; + emoji_regex = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0pcw3axgcmsgihp0xlsdqrqmavz0lw8g396b048fg21033kssxjn"; + type = "gem"; + }; + version = "0.1.1"; }; excon = { source = { remotes = ["https://rubygems.org"]; - sha256 = "1rxwlfs7dq4r3bi9avgn7j6bz4hq1a3hdlr9xwdiyp4dp4286xfc"; + sha256 = "15l9w0938c19nxmrp09n75qpmm64k12xj69h47yvxzcxcpbgnkb2"; type = "gem"; }; - version = "0.60.0"; + version = "0.62.0"; }; faraday = { dependencies = ["multipart-post"]; @@ -142,21 +150,21 @@ version = "2.1.1"; }; fastlane = { - dependencies = ["CFPropertyList" "addressable" "babosa" "colored" "commander-fastlane" "dotenv" "excon" "faraday" "faraday-cookie_jar" "faraday_middleware" "fastimage" "gh_inspector" "google-api-client" "highline" "json" "mini_magick" "multi_json" "multi_xml" "multipart-post" "plist" "public_suffix" "rubyzip" "security" "slack-notifier" "terminal-notifier" "terminal-table" "tty-screen" "tty-spinner" "word_wrap" "xcodeproj" "xcpretty" "xcpretty-travis-formatter"]; + dependencies = ["CFPropertyList" "addressable" "babosa" "colored" "commander-fastlane" "dotenv" "emoji_regex" "excon" "faraday" "faraday-cookie_jar" "faraday_middleware" "fastimage" "gh_inspector" "google-api-client" "highline" "json" "mini_magick" "multi_json" "multi_xml" "multipart-post" "plist" "public_suffix" "rubyzip" "security" "simctl" "slack-notifier" "terminal-notifier" "terminal-table" "tty-screen" "tty-spinner" "word_wrap" "xcodeproj" "xcpretty" "xcpretty-travis-formatter"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "0saas50qdfipkms66snyg7imvzn1vfngd87dfygj9x8v18bqwvis"; + sha256 = "04k6pn95qbpvbmqxrs4pngvfyk4pifcv8is3819b33p754pkiqrp"; type = "gem"; }; - version = "2.80.0"; + version = "2.91.0"; }; gh_inspector = { source = { remotes = ["https://rubygems.org"]; - sha256 = "0mpfl279k8yff2ia601b37zw31blwh2plkr501iz6qj8drx3mq3c"; + sha256 = "0f8r9byajj3bi2c7c5sqrc7m0zrv3nblfcd4782lw5l73cbsgk04"; type = "gem"; }; - version = "1.1.1"; + version = "1.1.3"; }; google-api-client = { dependencies = ["addressable" "googleauth" "httpclient" "mime-types" "representable" "retriable"]; @@ -294,10 +302,18 @@ nanaimo = { source = { remotes = ["https://rubygems.org"]; - sha256 = "0z6rbji02x75vm5jw4hbpp75khp4z5yfgbaz1h9l8aa00hqf0fxd"; + sha256 = "03x5f7hk0s21hlkj309w0qipjxz34kyd3c5yj25zq3s2yyn57idi"; type = "gem"; }; - version = "0.2.3"; + version = "0.2.5"; + }; + naturally = { + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0avn8b2qbfm22afln2p7rky73zns8c444mdhdh4ki8hbjsn0f8cx"; + type = "gem"; + }; + version = "2.1.0"; }; os = { source = { @@ -373,6 +389,15 @@ }; version = "0.8.1"; }; + simctl = { + dependencies = ["CFPropertyList" "naturally"]; + source = { + remotes = ["https://rubygems.org"]; + sha256 = "0l1hwxkbpgfhla6dbf0f6nhj794c0k6ilxlh07zcm8by3vdrsvib"; + type = "gem"; + }; + version = "1.6.3"; + }; slack-notifier = { source = { remotes = ["https://rubygems.org"]; @@ -443,10 +468,10 @@ unf_ext = { source = { remotes = ["https://rubygems.org"]; - sha256 = "14hr2dzqh33kqc0xchs8l05pf3kjcayvad4z1ip5rdjxrkfk8glb"; + sha256 = "06p1i6qhy34bpb8q8ms88y6f2kz86azwm098yvcc0nyqk9y729j1"; type = "gem"; }; - version = "0.0.7.4"; + version = "0.0.7.5"; }; unicode-display_width = { source = { @@ -468,10 +493,10 @@ dependencies = ["CFPropertyList" "atomos" "claide" "colored2" "nanaimo"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "0zqx24qhax7p91rs1114da0v86cy9m7an1bjwxq6dyccp8g6kb50"; + sha256 = "16743g16mrh47f1lxkbw28xn9mmlf1r0zicin4malalsxxkc7ykz"; type = "gem"; }; - version = "1.5.6"; + version = "1.5.7"; }; xcpretty = { dependencies = ["rouge"]; diff --git a/pkgs/tools/admin/iamy/default.nix b/pkgs/tools/admin/iamy/default.nix new file mode 100644 index 000000000000..cfe336a7e830 --- /dev/null +++ b/pkgs/tools/admin/iamy/default.nix @@ -0,0 +1,22 @@ +{ stdenv, buildGoPackage, fetchFromGitHub }: + +buildGoPackage rec { + name = "iamy-${version}"; + version = "2.1.1"; + + goPackagePath = "github.com/99designs/iamy"; + + src = fetchFromGitHub { + owner = "99designs"; + repo = "iamy"; + rev = "v${version}"; + sha256 = "0b55hxcvgil8rl6zh2kyndfi7s5nzclawjb0sby14wpys3v08bjf"; + }; + + meta = with stdenv.lib; { + description = "A cli tool for importing and exporting AWS IAM configuration to YAML files"; + homepage = https://github.com/99designs/iamy; + license = licenses.mit; + maintainers = with maintainers; [ suvash ]; + }; +} diff --git a/pkgs/tools/admin/lxd/default.nix b/pkgs/tools/admin/lxd/default.nix index 64ec5e9b418e..cfbb90fdc308 100644 --- a/pkgs/tools/admin/lxd/default.nix +++ b/pkgs/tools/admin/lxd/default.nix @@ -1,23 +1,37 @@ -{ stdenv, lib, pkgconfig, lxc, buildGoPackage, fetchFromGitHub }: +{ stdenv, lib, pkgconfig, lxc, buildGoPackage, fetchurl +, makeWrapper, acl, rsync, gnutar, xz, btrfs-progs, gzip, dnsmasq, squashfsTools, iproute, iptables +}: buildGoPackage rec { - name = "lxd-${version}"; - version = "2.16"; - rev = "lxd-${version}"; + name = "lxd-3.0.0"; goPackagePath = "github.com/lxc/lxd"; - src = fetchFromGitHub { - inherit rev; - owner = "lxc"; - repo = "lxd"; - sha256 = "0i2mq9m8k9kznwz1i0xb48plp1ffpzvbdrvqvagis4sm17yab3fn"; + src = fetchurl { + url = "https://github.com/lxc/lxd/releases/download/${name}/${name}.tar.gz"; + sha256 = "0m5prdf9sk8k5bws1zva4n9ycggmy76wnjr6wb423066pszz24ww"; }; - goDeps = ./deps.nix; + preBuild = '' + # unpack vendor + pushd go/src/github.com/lxc/lxd + rm dist/src/github.com/lxc/lxd + cp -r dist/src/* ../../.. + rm -r dist + popd + ''; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ lxc ]; + postInstall = '' + # binaries from test/ + rm $bin/bin/{deps,macaroon-identity} + + wrapProgram $bin/bin/lxd --prefix PATH ":" ${stdenv.lib.makeBinPath [ + acl rsync gnutar xz btrfs-progs gzip dnsmasq squashfsTools iproute iptables + ]} + ''; + + nativeBuildInputs = [ pkgconfig makeWrapper ]; + buildInputs = [ lxc acl ]; meta = with stdenv.lib; { description = "Daemon based on liblxc offering a REST API to manage containers"; diff --git a/pkgs/tools/admin/lxd/deps.nix b/pkgs/tools/admin/lxd/deps.nix deleted file mode 100644 index e0f591a23d1e..000000000000 --- a/pkgs/tools/admin/lxd/deps.nix +++ /dev/null @@ -1,165 +0,0 @@ -# This file was generated by https://github.com/kamilchm/go2nix v1.2.0 -[ - { - goPackagePath = "github.com/dustinkirkland/golang-petname"; - fetch = { - type = "git"; - url = "https://github.com/dustinkirkland/golang-petname"; - rev = "4f77bdee0b67a08d17afadc0d5a4a3d1cb7d8d14"; - sha256 = "1cizm3xywsp9vc381k02dhjq5a6c772wc05w60m4gfdmp2kmd4di"; - }; - } - { - goPackagePath = "github.com/golang/protobuf"; - fetch = { - type = "git"; - url = "https://github.com/golang/protobuf"; - rev = "2bba0603135d7d7f5cb73b2125beeda19c09f4ef"; - sha256 = "1xy0bj66qks2xlzxzlfma16w7m8g6rrwawmlhlv68bcw2k5hvvib"; - }; - } - { - goPackagePath = "github.com/gorilla/mux"; - fetch = { - type = "git"; - url = "https://github.com/gorilla/mux"; - rev = "599cba5e7b6137d46ddf58fb1765f5d928e69604"; - sha256 = "0wd6jjii1kg5s0nk3ri6gqriz6hbd6bbcn6x4jf8n7ncrb8qsxyz"; - }; - } - { - goPackagePath = "github.com/gorilla/websocket"; - fetch = { - type = "git"; - url = "https://github.com/gorilla/websocket"; - rev = "a91eba7f97777409bc2c443f5534d41dd20c5720"; - sha256 = "13cg6wwkk2ddqbm0nh9fpx4mq7f6qym12ch4lvs53n028ycdgw87"; - }; - } - { - goPackagePath = "github.com/mattn/go-colorable"; - fetch = { - type = "git"; - url = "https://github.com/mattn/go-colorable"; - rev = "ded68f7a9561c023e790de24279db7ebf473ea80"; - sha256 = "0q019h59jq815jfl9rgk4yrpkn5rpcx9s6dksdm48rp1abafwvfc"; - }; - } - { - goPackagePath = "github.com/mattn/go-sqlite3"; - fetch = { - type = "git"; - url = "https://github.com/mattn/go-sqlite3"; - rev = "cf7286f069c3ef596efcc87781a4653a2e7607bd"; - sha256 = "19ipf6bf1xd7w2fm8dnv5my4jp3lhwhlrhfwhwq559amp1h4nwyq"; - }; - } - { - goPackagePath = "github.com/pborman/uuid"; - fetch = { - type = "git"; - url = "https://github.com/pborman/uuid"; - rev = "1b00554d822231195d1babd97ff4a781231955c9"; - sha256 = "0rjkcf85sagdwzsycj1bbjyx5bgmrc1i8l5qf1f44z24rhbbkaan"; - }; - } - { - goPackagePath = "github.com/syndtr/gocapability"; - fetch = { - type = "git"; - url = "https://github.com/syndtr/gocapability"; - rev = "e7cb7fa329f456b3855136a2642b197bad7366ba"; - sha256 = "1i65kyjhbaya45zj9zqkb17plbqf92sfvl9fcz9s9qslg0qab2i1"; - }; - } - { - goPackagePath = "golang.org/x/crypto"; - fetch = { - type = "git"; - url = "https://go.googlesource.com/crypto"; - rev = "3543873453996aaab2fc6b3928a35fc5ca2b5afb"; - sha256 = "1d7pjqzh5893mzkz60bv5ypmr9zgyvb9z2gvcjrsqniwcqlhbk2c"; - }; - } - { - goPackagePath = "golang.org/x/net"; - fetch = { - type = "git"; - url = "https://go.googlesource.com/net"; - rev = "da118f7b8e5954f39d0d2130ab35d4bf0e3cb344"; - sha256 = "09xpndqc6a2r0lw42cyl1pkhfddl01sd9c3qqjjwp3vmxm004whv"; - }; - } - { - goPackagePath = "gopkg.in/flosch/pongo2.v3"; - fetch = { - type = "git"; - url = "https://gopkg.in/flosch/pongo2.v3"; - rev = "5e81b817a0c48c1c57cdf1a9056cf76bdee02ca9"; - sha256 = "0fd7d79644zmcirsb1gvhmh0l5vb5nyxmkzkvqpmzzcg6yfczph8"; - }; - } - { - goPackagePath = "gopkg.in/inconshreveable/log15.v2"; - fetch = { - type = "git"; - url = "https://gopkg.in/inconshreveable/log15.v2"; - rev = "b105bd37f74e5d9dc7b6ad7806715c7a2b83fd3f"; - sha256 = "18rldvi60i7b3lljfrsqgcc24gdkw2pcixxydznyggaqhh96l6a8"; - }; - } - { - goPackagePath = "gopkg.in/lxc/go-lxc.v2"; - fetch = { - type = "git"; - url = "https://gopkg.in/lxc/go-lxc.v2"; - rev = "8304875cc3423823032ec93556beee076c6ba687"; - sha256 = "12vrx9ilxkl1nxc5k81c6b2a1i715843r23fra681digdjnd8bpk"; - }; - } - { - goPackagePath = "gopkg.in/tomb.v2"; - fetch = { - type = "git"; - url = "https://gopkg.in/tomb.v2"; - rev = "d5d1b5820637886def9eef33e03a27a9f166942c"; - sha256 = "1sv15sri99szkdz1bkh0ir46w9n8prrwx5hfai13nrhkawfyfy10"; - }; - } - { - goPackagePath = "gopkg.in/yaml.v2"; - fetch = { - type = "git"; - url = "https://gopkg.in/yaml.v2"; - rev = "cd8b52f8269e0feb286dfeef29f8fe4d5b397e0b"; - sha256 = "1hj2ag9knxflpjibck0n90jrhsrqz7qvad4qnif7jddyapi9bqzl"; - }; - } - { - goPackagePath = "github.com/gosexy/gettext"; - fetch = { - type = "git"; - url = "https://github.com/gosexy/gettext"; - rev = "74466a0a0c4a62fea38f44aa161d4bbfbe79dd6b"; - sha256 = "0asphx8nd7zmp88wk6aakk5292np7yw73akvfdvlvs9q5r5ahkgi"; - }; - } - { - goPackagePath = "github.com/olekukonko/tablewriter"; - fetch = { - type = "git"; - url = "https://github.com/olekukonko/tablewriter"; - rev = "febf2d34b54a69ce7530036c7503b1c9fbfdf0bb"; - sha256 = "1ir7bs4m5rk8v9vpycjj7mn6sc6j9wvxkd63i9b6fmrdsx9q0x4g"; - }; - } - { - goPackagePath = "github.com/mattn/go-runewidth"; - fetch = { - type = "git"; - url = "https://github.com/mattn/go-runewidth"; - rev = "14207d285c6c197daabb5c9793d63e7af9ab2d50"; - sha256 = "0y6yq9zd4kh7fimnc00r3h9pr2pwa5j85b3jcn5dyfamsnm2xdsv"; - }; - } -] diff --git a/pkgs/tools/admin/salt/default.nix b/pkgs/tools/admin/salt/default.nix index b50564602256..4077c4fb9ecb 100644 --- a/pkgs/tools/admin/salt/default.nix +++ b/pkgs/tools/admin/salt/default.nix @@ -8,19 +8,18 @@ python2Packages.buildPythonApplication rec { pname = "salt"; - version = "2017.7.2"; - name = "${pname}-${version}"; + version = "2017.7.4"; src = python2Packages.fetchPypi { inherit pname version; - sha256 = "0h18zwp1w90rgxpmqgrmn9wp31h03f0vak8lpnnbh0dzbbgcffzz"; + sha256 = "15xfvclk3ns8vk17j7bfy4alq7ab5x3y3jnpqzp5583bfyak0mqx"; }; propagatedBuildInputs = with python2Packages; [ futures jinja2 markupsafe - msgpack + msgpack-python pycrypto pyyaml pyzmq diff --git a/pkgs/tools/admin/simp_le/default.nix b/pkgs/tools/admin/simp_le/default.nix index b618e71568d3..47bf848578d9 100644 --- a/pkgs/tools/admin/simp_le/default.nix +++ b/pkgs/tools/admin/simp_le/default.nix @@ -10,6 +10,8 @@ pythonPackages.buildPythonApplication rec { }; postPatch = '' + # drop upper bound of acme requirement + sed -ri "s/'(acme>=[^,]+),<[^']+'/'\1'/" setup.py substituteInPlace simp_le.py \ --replace "/bin/sh" "${bash}/bin/sh" ''; diff --git a/pkgs/tools/audio/abcmidi/default.nix b/pkgs/tools/audio/abcmidi/default.nix index 6d8376b60357..dc5a010ec741 100644 --- a/pkgs/tools/audio/abcmidi/default.nix +++ b/pkgs/tools/audio/abcmidi/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "abcMIDI-${version}"; - version = "2018.04.01"; + version = "2018.04.18"; src = fetchzip { url = "http://ifdo.ca/~seymour/runabc/${name}.zip"; - sha256 = "1ffr358q663qgcjzg2l50isp8hybxp60r99xma2qhhy7lvyv57x4"; + sha256 = "0kbval5ckan8vvrlpyz1mkb1ifvr149gxpb7ljbcm890p8hpaxff"; }; # There is also a file called "makefile" which seems to be preferred by the standard build phase diff --git a/pkgs/tools/audio/playerctl/default.nix b/pkgs/tools/audio/playerctl/default.nix index b04e449835d4..b8f39a03083c 100644 --- a/pkgs/tools/audio/playerctl/default.nix +++ b/pkgs/tools/audio/playerctl/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "playerctl-${version}"; - version = "0.5.0"; + version = "0.6.0"; src = fetchFromGitHub { owner = "acrisci"; repo = "playerctl"; rev = "v${version}"; - sha256 = "0b4pg5pwblgbf6kvvynzh9dshfikxy5c2ks7733n7wza5wkpgmng"; + sha256 = "1sxy87syrfk485f2x556rl567j6rph4ss0xahf04bv26bzj3mqrp"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/backup/borg/default.nix b/pkgs/tools/backup/borg/default.nix index 77d7626a526a..43f45a1783f5 100644 --- a/pkgs/tools/backup/borg/default.nix +++ b/pkgs/tools/backup/borg/default.nix @@ -1,4 +1,4 @@ -{ stdenv, python3Packages, acl, lz4, openssl, openssh }: +{ stdenv, python3Packages, acl, libb2, lz4, zstd, openssl, openssh }: python3Packages.buildPythonApplication rec { pname = "borgbackup"; @@ -19,7 +19,7 @@ python3Packages.buildPythonApplication rec { sphinx guzzle_sphinx_theme ]; buildInputs = [ - lz4 openssl python3Packages.setuptools_scm + libb2 lz4 zstd openssl python3Packages.setuptools_scm ] ++ stdenv.lib.optionals stdenv.isLinux [ acl ]; propagatedBuildInputs = with python3Packages; [ cython msgpack-python @@ -28,6 +28,8 @@ python3Packages.buildPythonApplication rec { preConfigure = '' export BORG_OPENSSL_PREFIX="${openssl.dev}" export BORG_LZ4_PREFIX="${lz4.dev}" + export BORG_LIBB2_PREFIX="${libb2}" + export BORG_LIBZSTD_PREFIX="${zstd}" ''; makeWrapperArgs = [ diff --git a/pkgs/tools/backup/burp/default.nix b/pkgs/tools/backup/burp/default.nix index 24065f7308b7..c079d8272b12 100644 --- a/pkgs/tools/backup/burp/default.nix +++ b/pkgs/tools/backup/burp/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "burp-${version}"; - version = "2.1.30"; + version = "2.1.32"; src = fetchFromGitHub { owner = "grke"; repo = "burp"; rev = version; - sha256 = "0l9zcw50zr081ddspl6vnh6d6cwyzgqzg7n5pq92dwbmd64qpz9p"; + sha256 = "1izs5vavffvj6z478s5x1shg71p2v5bnnrsam1avs21ylxbfnxi5"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; diff --git a/pkgs/tools/backup/diskrsync/default.nix b/pkgs/tools/backup/diskrsync/default.nix index 2e86ad0deda8..3a5ffc30f8f2 100644 --- a/pkgs/tools/backup/diskrsync/default.nix +++ b/pkgs/tools/backup/diskrsync/default.nix @@ -19,7 +19,7 @@ buildGoPackage rec { buildInputs = [ makeWrapper ]; preFixup = '' - wrapProgram "$bin/bin/diskrsync" --prefix PATH : ${openssh}/bin + wrapProgram "$bin/bin/diskrsync" --argv0 diskrsync --prefix PATH : ${openssh}/bin ''; meta = with stdenv.lib; { diff --git a/pkgs/tools/backup/ori/default.nix b/pkgs/tools/backup/ori/default.nix index d95716864c88..279652b0cd0b 100644 --- a/pkgs/tools/backup/ori/default.nix +++ b/pkgs/tools/backup/ori/default.nix @@ -24,5 +24,6 @@ stdenv.mkDerivation rec { homepage = http://ori.scs.stanford.edu/; license = licenses.mit; platforms = platforms.unix; + broken = true; # 2018-04-11 }; } diff --git a/pkgs/tools/backup/partclone/default.nix b/pkgs/tools/backup/partclone/default.nix index 681999e35d07..758146fcc00b 100644 --- a/pkgs/tools/backup/partclone/default.nix +++ b/pkgs/tools/backup/partclone/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, autoreconfHook -, pkgconfig, libuuid, e2fsprogs +, pkgconfig, libuuid, e2fsprogs, nilfs-utils, ntfs3g }: stdenv.mkDerivation rec { @@ -15,10 +15,23 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook pkgconfig ]; buildInputs = [ - e2fsprogs libuuid stdenv.cc.libc + e2fsprogs libuuid stdenv.cc.libc nilfs-utils ntfs3g (stdenv.lib.getOutput "static" stdenv.cc.libc) ]; + configureFlags = [ + "--enable-xfs" + "--enable-extfs" + "--enable-hfsp" + "--enable-fat" + "--enable-exfat" + "--enable-ntfs" + "--enable-btrfs" + "--enable-minix" + "--enable-f2fs" + "--enable-nilfs2" + ]; + enableParallelBuilding = true; meta = { diff --git a/pkgs/tools/backup/znapzend/default.nix b/pkgs/tools/backup/znapzend/default.nix index cacfb8287a33..796a34c253a9 100644 --- a/pkgs/tools/backup/znapzend/default.nix +++ b/pkgs/tools/backup/znapzend/default.nix @@ -1,8 +1,8 @@ { stdenv, fetchFromGitHub, zfs, mbuffer, perl, perlPackages, wget, autoconf, automake }: let - version = "0.17.0"; - checksum = "0cncwkiw0w2am7gwi01p6ln87zgg1x6blfyxx7n7x8m1mv6704hl"; + version = "0.18.0"; + checksum = "1nlvw56viwgafma506slywfg54z6009jmzc9q6wljgr6mqfmmchd"; in stdenv.mkDerivation rec { name = "znapzend-${version}"; diff --git a/pkgs/tools/filesystems/bcachefs-tools/default.nix b/pkgs/tools/filesystems/bcachefs-tools/default.nix index 3684b216cd75..c2e13b75daa9 100644 --- a/pkgs/tools/filesystems/bcachefs-tools/default.nix +++ b/pkgs/tools/filesystems/bcachefs-tools/default.nix @@ -2,12 +2,12 @@ , keyutils, liburcu, zlib, libaio, zstd }: stdenv.mkDerivation rec { - name = "bcachefs-tools-unstable-2018-03-20"; + name = "bcachefs-tools-unstable-2018-04-10"; src = fetchgit { url = "https://evilpiepirate.org/git/bcachefs-tools.git"; - rev = "ff5e165532a2eed87700649d03f91a612a58e92a"; - sha256 = "1mikhffkr4a1yhy36yh70dhgcimcpvdm5mjl5fyni0bpgqrw67dn"; + rev = "c598d91dcb0c7e95abdacb2711898ae14ab52ca1"; + sha256 = "1mglw6p1145nryn8babkg2hj778kqa0vrzjbdp9kxjlyb3fksmff"; }; enableParallelBuilding = true; diff --git a/pkgs/tools/filesystems/extundelete/default.nix b/pkgs/tools/filesystems/extundelete/default.nix index a30709d4c920..e0c5ea3def4e 100644 --- a/pkgs/tools/filesystems/extundelete/default.nix +++ b/pkgs/tools/filesystems/extundelete/default.nix @@ -11,6 +11,14 @@ stdenv.mkDerivation rec { buildInputs = [ e2fsprogs ]; + # inode field i_dir_acl was repurposed as i_size_high in e2fsprogs 1.44, + # breaking the build + patchPhase = '' + substituteInPlace src/insertionops.cc \ + --replace "Directory ACL:" "High 32 bits of size:" \ + --replace "inode.i_dir_acl" "inode.i_size_high" + ''; + meta = with stdenv.lib; { description = "Utility that can recover deleted files from an ext3 or ext4 partition"; homepage = http://extundelete.sourceforge.net/; diff --git a/pkgs/tools/filesystems/hfsprogs/default.nix b/pkgs/tools/filesystems/hfsprogs/default.nix deleted file mode 100644 index 25ec31ea698a..000000000000 --- a/pkgs/tools/filesystems/hfsprogs/default.nix +++ /dev/null @@ -1,45 +0,0 @@ -{ stdenv, fetchurl, openssl, libbsd }: - -let version = "332.25"; - package_name = "hfsprogs"; in -stdenv.mkDerivation rec { - name = "${package_name}-${version}"; - srcs = [ - (fetchurl { - url = "http://ftp.de.debian.org/debian/pool/main/h/hfsprogs/${package_name}_${version}-11.debian.tar.gz"; - sha256 = "62d9b8599c66ebffbc57ce5d776e20b41341130d9b27341d63bda08460ebde7c"; - }) - (fetchurl { - url = "https://opensource.apple.com/tarballs/diskdev_cmds/diskdev_cmds-${version}.tar.gz"; - sha256 = "74c9aeca899ed7f4bf155c65fc45bf0f250c0f6d57360ea953b1d536d9aa45e6"; - }) - ]; - - sourceRoot = "diskdev_cmds-" + version; - patches = [ "../debian/patches/*.patch" ]; - - buildInputs = [ openssl libbsd ]; - makefile = "Makefile.lnx"; - - # Inspired by PKGBUILD of https://www.archlinux.org/packages/community/x86_64/hfsprogs/ - installPhase = '' - # Create required package directories - install -m 755 -d "$out/bin" - install -m 755 -d "$out/share/${package_name}" - install -m 755 -d "$out/share/man/man8/" - # Copy executables - install -m 755 "newfs_hfs.tproj/newfs_hfs" "$out/bin/mkfs.hfsplus" - install -m 755 "fsck_hfs.tproj/fsck_hfs" "$out/bin/fsck.hfsplus" - # Copy shared data - install -m 644 "newfs_hfs.tproj/hfsbootdata.img" "$out/share/${package_name}/hfsbootdata" - # Copy man pages - install -m 644 "newfs_hfs.tproj/newfs_hfs.8" "$out/share/man/man8/mkfs.hfsplus.8" - install -m 644 "fsck_hfs.tproj/fsck_hfs.8" "$out/share/man/man8/fsck.hfsplus.8" - ''; - - meta = { - description = "HFS/HFS+ user space utils"; - license = stdenv.lib.licenses.apsl20; - platforms = stdenv.lib.platforms.linux; - }; -} diff --git a/pkgs/tools/filesystems/mergerfs/default.nix b/pkgs/tools/filesystems/mergerfs/default.nix index 6f239bfa1279..16e6db8e4f75 100644 --- a/pkgs/tools/filesystems/mergerfs/default.nix +++ b/pkgs/tools/filesystems/mergerfs/default.nix @@ -1,21 +1,28 @@ -{ stdenv, fetchgit, autoconf, automake, pkgconfig, gettext, libtool, git, pandoc, which, attr, libiconv }: +{ stdenv, fetchFromGitHub, automake, autoconf, pkgconfig, gettext, libtool, pandoc, which, attr, libiconv }: stdenv.mkDerivation rec { name = "mergerfs-${version}"; - version = "2.24.0"; + version = "2.24.2"; - # not using fetchFromGitHub because of changelog being built with git log - src = fetchgit { - url = "https://github.com/trapexit/mergerfs"; - rev = "refs/tags/${version}"; - sha256 = "12ci1i5zkarl1rz0pq1ldw0fpp4yfj8vz36jij63am7w7gp7qly2"; - deepClone = true; - leaveDotGit = true; + src = fetchFromGitHub { + owner = "trapexit"; + repo = "mergerfs"; + rev = version; + sha256 = "0i65v7900s7c9jkj3a4v44vf3r5mvjkbcic3df940nmk0clahhcs"; }; - nativeBuildInputs = [ autoconf automake pkgconfig gettext libtool git pandoc which ]; + nativeBuildInputs = [ + automake autoconf pkgconfig gettext libtool pandoc which + ]; buildInputs = [ attr libiconv ]; + preConfigure = '' + cat > src/version.hpp <<EOF + #pragma once + static const char MERGERFS_VERSION[] = "${version}"; + EOF + ''; + makeFlags = [ "PREFIX=$(out)" "XATTR_AVAILABLE=1" ]; meta = { diff --git a/pkgs/tools/graphics/asymptote/default.nix b/pkgs/tools/graphics/asymptote/default.nix index ce66402d09fc..7337cd227a2e 100644 --- a/pkgs/tools/graphics/asymptote/default.nix +++ b/pkgs/tools/graphics/asymptote/default.nix @@ -9,11 +9,11 @@ let s = # Generated upstream information rec { baseName="asymptote"; - version="2.42"; + version="2.44"; name="${baseName}-${version}"; - hash="0dprc4shzdpvp87kc97ggh5ay2zmskjjaciay7mnblx63rhk1d95"; - url="https://freefr.dl.sourceforge.net/project/asymptote/2.42/asymptote-2.42.src.tgz"; - sha256="0dprc4shzdpvp87kc97ggh5ay2zmskjjaciay7mnblx63rhk1d95"; + hash="1rs9v95g19ri6ra2m921jf2yr9avqnzfybrqxilsld98xpqx56vg"; + url="https://freefr.dl.sourceforge.net/project/asymptote/2.44/asymptote-2.44.src.tgz"; + sha256="1rs9v95g19ri6ra2m921jf2yr9avqnzfybrqxilsld98xpqx56vg"; }; buildInputs = [ ghostscriptX imagemagick fftw diff --git a/pkgs/tools/graphics/maim/default.nix b/pkgs/tools/graphics/maim/default.nix index c7e8dc966e8d..cac86e29c472 100644 --- a/pkgs/tools/graphics/maim/default.nix +++ b/pkgs/tools/graphics/maim/default.nix @@ -1,22 +1,23 @@ { stdenv, fetchFromGitHub, cmake, pkgconfig -, zlib, libpng, libjpeg -, libGLU_combined, glm, libX11, libXext, libXfixes, libXrandr, libXcomposite, slop, icu }: +, zlib, libpng, libjpeg, libGLU_combined, glm +, libX11, libXext, libXfixes, libXrandr, libXcomposite, slop, icu +}: stdenv.mkDerivation rec { name = "maim-${version}"; - version = "5.4.68"; + version = "5.5"; src = fetchFromGitHub { owner = "naelstrof"; repo = "maim"; rev = "v${version}"; - sha256 = "12jvfxzfhh6cbk6ygliwnkvm3mb7rca60k6x9qdzm17jsz65xhh0"; + sha256 = "0dr44lwqsvhwf9pncxq6k42zj9hj07b96qsk1q8vh4l42zcpqzla"; }; nativeBuildInputs = [ cmake pkgconfig ]; buildInputs = - [ zlib libpng libjpeg libGLU_combined glm libX11 libXext libXfixes libXrandr - libXcomposite slop icu ]; + [ zlib libpng libjpeg libGLU_combined glm + libX11 libXext libXfixes libXrandr libXcomposite slop icu ]; doCheck = false; diff --git a/pkgs/tools/graphics/pstoedit/default.nix b/pkgs/tools/graphics/pstoedit/default.nix index 9fdf0ad0465a..a31a9848c101 100644 --- a/pkgs/tools/graphics/pstoedit/default.nix +++ b/pkgs/tools/graphics/pstoedit/default.nix @@ -4,11 +4,11 @@ }: stdenv.mkDerivation rec { - name = "pstoedit-3.70"; + name = "pstoedit-3.71"; src = fetchurl { url = "mirror://sourceforge/pstoedit/${name}.tar.gz"; - sha256 = "130kz0ghsrggdn70kygrmsy3n533hwd948q69vyvqz44yw9n3f06"; + sha256 = "15dwrwjbixjqph2jmdqzi9fihwpqc1kz5jcv5phxw8wwrlicv285"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/tools/inputmethods/ibus-engines/ibus-libpinyin/default.nix b/pkgs/tools/inputmethods/ibus-engines/ibus-libpinyin/default.nix index bd22aefe2a95..3bdb69391cc4 100644 --- a/pkgs/tools/inputmethods/ibus-engines/ibus-libpinyin/default.nix +++ b/pkgs/tools/inputmethods/ibus-engines/ibus-libpinyin/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { name = "ibus-libpinyin-${version}"; - version = "1.9.3"; + version = "1.10.0"; src = fetchFromGitHub { owner = "libpinyin"; repo = "ibus-libpinyin"; rev = version; - sha256 = "02rwddv1lxzk70946v3rjsx1p7hx1d9bnwb7cx406cbws73yb2r9"; + sha256 = "0zkzz6ig74nws8phqxbsggnpf5g5f2hxi0mdyn2m3s4nm14q3ma6"; }; buildInputs = [ ibus glib sqlite libpinyin python3 gtk3 db ]; diff --git a/pkgs/tools/misc/antimicro/default.nix b/pkgs/tools/misc/antimicro/default.nix index ee0accac2d9b..62d46bba5b0d 100644 --- a/pkgs/tools/misc/antimicro/default.nix +++ b/pkgs/tools/misc/antimicro/default.nix @@ -22,5 +22,6 @@ mkDerivation rec { maintainers = with maintainers; [ jb55 ]; license = licenses.gpl3; platforms = with platforms; linux; + broken = true; # 2018-04-10 }; } diff --git a/pkgs/tools/misc/dashing/default.nix b/pkgs/tools/misc/dashing/default.nix new file mode 100644 index 000000000000..673e5c4c321f --- /dev/null +++ b/pkgs/tools/misc/dashing/default.nix @@ -0,0 +1,26 @@ +# This file was generated by https://github.com/kamilchm/go2nix v1.2.1 +{ stdenv, buildGoPackage, fetchgit, fetchhg, fetchbzr, fetchsvn }: + +buildGoPackage rec { + name = "dashing-unstable-${version}"; + version = "2018-02-15"; + rev = "0e0519d76ed6bbbe02b00ee1d1ac24697d349f49"; + + goPackagePath = "github.com/technosophos/dashing"; + + src = fetchgit { + inherit rev; + url = "https://github.com/technosophos/dashing"; + sha256 = "066njyk3c1fqqr0v6aa6knp3dnksmh6hnl9d84fgd4wzyw3ma2an"; + }; + + goDeps = ./deps.nix; + + meta = with stdenv.lib; { + description = "A Dash Generator Script for Any HTML"; + homepage = https://github.com/technosophos/dashing; + license = licenses.mit; + maintainers = [ ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/tools/misc/dashing/deps.nix b/pkgs/tools/misc/dashing/deps.nix new file mode 100644 index 000000000000..4ad5a10149ec --- /dev/null +++ b/pkgs/tools/misc/dashing/deps.nix @@ -0,0 +1,39 @@ +# This file was generated by https://github.com/kamilchm/go2nix v1.2.1 +[ + { + goPackagePath = "github.com/andybalholm/cascadia"; + fetch = { + type = "git"; + url = "https://github.com/andybalholm/cascadia"; + rev = "901648c87902174f774fac311d7f176f8647bdaa"; + sha256 = "09j8cavbhqqdxjqrkwbc40g8p0i49zf3184rpjm5p2rjbprcghcc"; + }; + } + { + goPackagePath = "github.com/codegangsta/cli"; + fetch = { + type = "git"; + url = "https://github.com/codegangsta/cli"; + rev = "8e01ec4cd3e2d84ab2fe90d8210528ffbb06d8ff"; + sha256 = "0cpr10n4ps3gcdbcink71ry9hzhdb5rrcysmylybs8h2lzxqgc1i"; + }; + } + { + goPackagePath = "github.com/mattn/go-sqlite3"; + fetch = { + type = "git"; + url = "https://github.com/mattn/go-sqlite3"; + rev = "d896508f87298565da02ed92730e7065c3de10b8"; + sha256 = "19q0rv171wx73rwdp81rkj9ys3r5jaav94b3j06gprg59phb98bs"; + }; + } + { + goPackagePath = "golang.org/x/net"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/net"; + rev = "61147c48b25b599e5b561d2e9c4f3e1ef489ca41"; + sha256 = "1520pdlw9a9s41ad1cf1z6y2ff4j96zbn82qffrxqk02bqlr9f5w"; + }; + } +] diff --git a/pkgs/tools/misc/debootstrap/default.nix b/pkgs/tools/misc/debootstrap/default.nix index 9e3abaaedfca..7b143183bc0c 100644 --- a/pkgs/tools/misc/debootstrap/default.nix +++ b/pkgs/tools/misc/debootstrap/default.nix @@ -4,13 +4,13 @@ # There is also cdebootstrap now. Is that easier to maintain? stdenv.mkDerivation rec { name = "debootstrap-${version}"; - version = "1.0.95"; + version = "1.0.97"; src = fetchurl { # git clone git://git.debian.org/d-i/debootstrap.git # I'd like to use the source. However it's lacking the lanny script ? (still true?) url = "mirror://debian/pool/main/d/debootstrap/debootstrap_${version}.tar.gz"; - sha256 = "1xpd1yblcgwhri64hzgxhalpf5j8gqbmkrsm1fs0pbwiy0wdz0ry"; + sha256 = "1w2wdiazfykjkwainxfk72rccqsh1l1i90h93phsvayv0gsbxrnk"; }; buildInputs = [ dpkg gettext gawk perl ]; diff --git a/pkgs/tools/misc/dust/default.nix b/pkgs/tools/misc/dust/default.nix new file mode 100644 index 000000000000..f34d05758cf4 --- /dev/null +++ b/pkgs/tools/misc/dust/default.nix @@ -0,0 +1,25 @@ +{ stdenv, fetchFromGitHub, cargo, rustPlatform }: + +rustPlatform.buildRustPackage rec { + name = "dust-${version}"; + version = "0.2.3"; + + src = fetchFromGitHub { + owner = "bootandy"; + repo = "dust"; + rev = "v${version}"; + sha256 = "1l8z1daiq2x92449p2ciblcwl0ddgr3vqj2dsd3z8jj3y0z8j51s"; + }; + + cargoSha256 = "0x3ay440vbc64y3pd8zhd119sw8fih0njmkzpr7r8wdw3k48v96m"; + + doCheck = false; + + meta = with stdenv.lib; { + description = "du + rust = dust. Like du but more intuitive"; + homepage = https://github.com/bootandy/dust; + license = licenses.asl20; + maintainers = [ maintainers.infinisil ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/tools/misc/flashrom/default.nix b/pkgs/tools/misc/flashrom/default.nix index b1e093126584..1bdab1e841f8 100644 --- a/pkgs/tools/misc/flashrom/default.nix +++ b/pkgs/tools/misc/flashrom/default.nix @@ -9,6 +9,12 @@ stdenv.mkDerivation rec { sha256 = "0i9wg1lyfg99bld7d00zqjm9f0lk6m0q3h3n9c195c9yysq5ccfb"; }; + # Newer versions of libusb deprecate some API flashrom uses. + postPatch = '' + substituteInPlace Makefile \ + --replace "-Werror" "-Werror -Wno-error=deprecated-declarations -Wno-error=unused-const-variable=" + ''; + nativeBuildInputs = [ pkgconfig ]; buildInputs = [ libftdi pciutils ]; diff --git a/pkgs/tools/misc/gnokii/default.nix b/pkgs/tools/misc/gnokii/default.nix index adad66c9bfa4..eb029d32f73e 100644 --- a/pkgs/tools/misc/gnokii/default.nix +++ b/pkgs/tools/misc/gnokii/default.nix @@ -21,5 +21,6 @@ stdenv.mkDerivation rec { homepage = http://www.gnokii.org; maintainers = [ stdenv.lib.maintainers.raskin ]; platforms = stdenv.lib.platforms.linux; + broken = true; # 2018-04-10 }; } diff --git a/pkgs/tools/misc/hdf5/default.nix b/pkgs/tools/misc/hdf5/default.nix index 2c1ba43a5587..494616d2b485 100644 --- a/pkgs/tools/misc/hdf5/default.nix +++ b/pkgs/tools/misc/hdf5/default.nix @@ -17,11 +17,11 @@ assert !cpp || mpi == null; let inherit (stdenv.lib) optional optionals; in stdenv.mkDerivation rec { - version = "1.10.1"; + version = "1.10.2"; name = "hdf5-${version}"; src = fetchurl { url = "https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/${name}/src/${name}.tar.bz2"; - sha256 = "1wpbi15za7kbsvih88kfcxblw412pjndl16x88dgnqr47piy2p4w"; + sha256 = "0wfb3w6dzi6zr2g1sdswqy9lxbp7yr4blvyi7k2xya7izmxmpb8w"; }; passthru = { diff --git a/pkgs/tools/misc/ipxe/default.nix b/pkgs/tools/misc/ipxe/default.nix index 786b3992a5cc..d34ccaa4b9e9 100644 --- a/pkgs/tools/misc/ipxe/default.nix +++ b/pkgs/tools/misc/ipxe/default.nix @@ -3,8 +3,8 @@ }: let - date = "20170922"; - rev = "74d90b33f8490adcee2026ece18d8411d93b6a39"; + date = "20180220"; + rev = "47849be3a900c546cf92066849be0806f4e611d9"; in stdenv.mkDerivation { @@ -14,7 +14,7 @@ stdenv.mkDerivation { src = fetchgit { url = git://git.ipxe.org/ipxe.git; - sha256 = "12ijrq451fj2x3i7c7xjlxig5mwbhmgzqjvmfl2sza953vfbk4vw"; + sha256 = "1f4pi1dp2zqnrbfnggnzycfvrxv0bqgw73dxbyy3hfy4mhdj6z45"; inherit rev; }; @@ -26,6 +26,7 @@ stdenv.mkDerivation { makeFlags = [ "ECHO_E_BIN_ECHO=echo" "ECHO_E_BIN_ECHO_E=echo" # No /bin/echo here. "ISOLINUX_BIN_LIST=${syslinux}/share/syslinux/isolinux.bin" + "LDLINUX_C32=${syslinux}/share/syslinux/ldlinux.c32" ] ++ lib.optional (embedScript != null) "EMBED=${embedScript}"; @@ -34,6 +35,7 @@ stdenv.mkDerivation { configurePhase = '' runHook preConfigure for opt in $enabledOptions; do echo "#define $opt" >> src/config/general.h; done + sed -i '/cp \''${ISOLINUX_BIN}/s/$/ --no-preserve=mode/' src/util/geniso runHook postConfigure ''; diff --git a/pkgs/tools/misc/lf/default.nix b/pkgs/tools/misc/lf/default.nix index 8ef5bd1c07cf..b78bb977dbcb 100644 --- a/pkgs/tools/misc/lf/default.nix +++ b/pkgs/tools/misc/lf/default.nix @@ -2,13 +2,13 @@ buildGoPackage rec { name = "lf-${version}"; - version = "2"; + version = "3"; src = fetchFromGitHub { owner = "gokcehan"; repo = "lf"; rev = "r${version}"; - sha256 = "0g9fy6x3wc5hda886ci79wj7rnjwvaidbwhsrckqgiqymbzvrdb8"; + sha256 = "1w4nly8g1p28ixq1vjg7qv07mb1vryys7cf6b7jdb523swra6a97"; }; goPackagePath = "github.com/gokcehan/lf"; diff --git a/pkgs/tools/misc/lf/deps.nix b/pkgs/tools/misc/lf/deps.nix index ec9dc30e0cd6..35becb002636 100644 --- a/pkgs/tools/misc/lf/deps.nix +++ b/pkgs/tools/misc/lf/deps.nix @@ -4,8 +4,8 @@ fetch = { type = "git"; url = "https://github.com/nsf/termbox-go"; - rev = "e2050e41c8847748ec5288741c0b19a8cb26d084"; # master - sha256 = "181b1df2b6fcn5wizq2qqxl1kwqbih5k15n08rx3bcz36q34n23s"; + rev = "7cbfaac9e282b3ea0cefeddc67b2c3ed3aaf97bc"; # master + sha256 = "0pb5p8q2x31aqs307lla75mm1a01mr2qyqxsfqix1pgwg16xbad8"; }; } { diff --git a/pkgs/tools/misc/quota/default.nix b/pkgs/tools/misc/linuxquota/default.nix index dfcefe092008..dfcefe092008 100644 --- a/pkgs/tools/misc/quota/default.nix +++ b/pkgs/tools/misc/linuxquota/default.nix diff --git a/pkgs/tools/misc/logstash/5.x.nix b/pkgs/tools/misc/logstash/5.x.nix index e528e3e0285f..058a8472bf26 100644 --- a/pkgs/tools/misc/logstash/5.x.nix +++ b/pkgs/tools/misc/logstash/5.x.nix @@ -6,7 +6,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://artifacts.elastic.co/downloads/logstash/${name}.tar.gz"; - sha256 = "0cpim121ydxdjr251by9jw6pidh5b52jl5ldcm7gp015q49x1nl7"; + sha256 = "0qcq4c4nysdscbjrikhw653xwbi4dwscynjzyndsp8l21vl81x7p"; }; dontBuild = true; diff --git a/pkgs/tools/misc/logstash/6.x.nix b/pkgs/tools/misc/logstash/6.x.nix index 3eb2648a4412..6aa3fd836965 100644 --- a/pkgs/tools/misc/logstash/6.x.nix +++ b/pkgs/tools/misc/logstash/6.x.nix @@ -6,7 +6,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://artifacts.elastic.co/downloads/logstash/${name}.tar.gz"; - sha256 = "18680qpdvhr16dx66jfia1zrg52005sgdy9yhl7vdhm4gcr7pxwc"; + sha256 = "07j3jjg5ik4gjgvcx15qqqas9p1m3815jml82a5r1ip9l6vc4h20"; }; dontBuild = true; @@ -22,6 +22,9 @@ stdenv.mkDerivation rec { mkdir -p $out cp -r {Gemfile*,modules,vendor,lib,bin,config,data,logstash-core,logstash-core-plugin-api} $out + patchShebangs $out/bin/logstash + patchShebangs $out/bin/logstash-plugin + wrapProgram $out/bin/logstash \ --set JAVA_HOME "${jre}" diff --git a/pkgs/tools/misc/memtest86+/default.nix b/pkgs/tools/misc/memtest86+/default.nix index d949108524f6..6103ba021260 100644 --- a/pkgs/tools/misc/memtest86+/default.nix +++ b/pkgs/tools/misc/memtest86+/default.nix @@ -1,36 +1,14 @@ -{ stdenv, fetchurl }: +{ stdenv, fetchgit }: stdenv.mkDerivation rec { - name = "memtest86+-5.01"; + name = "memtest86+-5.01+coreboot-20180113"; - src = fetchurl { - url = "http://www.memtest.org/download/5.01/${name}.tar.gz"; - sha256 = "0fch1l55753y6jkk0hj8f6vw4h1kinkn9ysp22dq5g9zjnvjf88l"; + src = fetchgit { + url = "https://review.coreboot.org/memtest86plus"; + rev = "5ca4eb9544e51254254d09ae6e70f93403469ec3"; + sha256 = "08m4rjr0chhhb1whgggknz926zv9hm8bisnxqp8lffqiwhb55rgk"; }; - patches = [ - (fetchurl { - url = "https://sources.debian.net/data/main/m/memtest86+/5.01-3/debian/patches/doc-serialconsole"; - sha256 = "1qh2byj9bmpchym8iq20n4hqmy10nrl6bi0d9pgdqikkmw9m38jq"; - }) - (fetchurl { - url = "https://sources.debian.net/data/main/m/memtest86+/5.01-3/debian/patches/multiboot"; - sha256 = "0nq61307ah5b41ff5nqs99wjzjzlajvfv6k9c9d0gqvhx8r4dvmy"; - }) - (fetchurl { - url = "https://sources.debian.net/data/main/m/memtest86+/5.01-3/debian/patches/memtest86+-5.01-O0.patch"; - sha256 = "1xmj3anq1fr0cxwv8lqfp5cr5f58v7glwc6z0v8hx8aib8yj1wl2"; - }) - (fetchurl { - url = "https://sources.debian.net/data/main/m/memtest86+/5.01-3/debian/patches/memtest86+-5.01-array-size.patch"; - sha256 = "0yxlzpfs6313s91y984p7rlf5rgybcjhg7i9zqy4wqhm3j90f1kb"; - }) - (fetchurl { - url = "https://sources.debian.net/data/main/m/memtest86+/5.01-3/debian/patches/gcc-5"; - sha256 = "13xfy6sn8qbj1hx4vms2cz24dsa3bl8n2iblz185hkn11y7141sc"; - }) - ]; - preBuild = '' # Really dirty hack to get Memtest to build without needing a Glibc # with 32-bit libraries and headers. @@ -42,7 +20,7 @@ stdenv.mkDerivation rec { NIX_CFLAGS_COMPILE = "-I. -std=gnu90"; - hardeningDisable = [ "fortify" "stackprotector" "pic" ]; + hardeningDisable = [ "all" ]; buildFlags = "memtest.bin"; diff --git a/pkgs/tools/misc/mht2htm/default.nix b/pkgs/tools/misc/mht2htm/default.nix index 930fd1e5d3ec..4f6c4bad97c7 100644 --- a/pkgs/tools/misc/mht2htm/default.nix +++ b/pkgs/tools/misc/mht2htm/default.nix @@ -39,5 +39,6 @@ in stdenv.mkDerivation rec { license = licenses.gpl3; maintainers = with maintainers; [ peterhoeg ]; platforms = platforms.all; + broken = true; # 2018-04-11 }; } diff --git a/pkgs/tools/misc/mstflint/default.nix b/pkgs/tools/misc/mstflint/default.nix index 9706e3f02882..748c0917defb 100644 --- a/pkgs/tools/misc/mstflint/default.nix +++ b/pkgs/tools/misc/mstflint/default.nix @@ -15,5 +15,6 @@ stdenv.mkDerivation rec { license = licenses.gpl2; platforms = platforms.linux; maintainers = with maintainers; [ wkennington ]; + broken = true; # 2018-04-11 }; } diff --git a/pkgs/tools/nagstamon/default.nix b/pkgs/tools/misc/nagstamon/default.nix index 3163b78437ec..3163b78437ec 100644 --- a/pkgs/tools/nagstamon/default.nix +++ b/pkgs/tools/misc/nagstamon/default.nix diff --git a/pkgs/tools/misc/ostree/default.nix b/pkgs/tools/misc/ostree/default.nix index 3b220153f173..a437eba49574 100644 --- a/pkgs/tools/misc/ostree/default.nix +++ b/pkgs/tools/misc/ostree/default.nix @@ -7,8 +7,8 @@ let libglnx-src = fetchFromGitHub { owner = "GNOME"; repo = "libglnx"; - rev = "5362f6bc3ff3e30f379e767b203d15c9e56d6f08"; - sha256 = "1l4vm7bx3cf4q44n3a1i2gszyryqyimcxvx54gna72q7dw130mrr"; + rev = "0c82203cd459a35cc3f471e3205355e9fb79160f"; + sha256 = "0xbrv7q6b2ygrbr0yr7p01zpryw45643qfwnlw0z2yv515qs7isc"; }; bsdiff-src = fetchFromGitHub { @@ -18,7 +18,7 @@ let sha256 = "1h71d2h2d3anp4msvpaff445rnzdxii3id2yglqk7af9i43kdsn1"; }; - version = "2017.12"; + version = "2018.4"; in stdenv.mkDerivation { name = "ostree-${version}"; @@ -26,7 +26,7 @@ in stdenv.mkDerivation { rev = "v${version}"; owner = "ostreedev"; repo = "ostree"; - sha256 = "0gxvpzwz7z4zihz5hkn6ajv7f6gas4zi2pznhi5v6wy7cw06if68"; + sha256 = "00jgj6vcjpz1akfbmf82q1bcs3njrmvdgy4c2gnn24vkmh9yr0lr"; }; nativeBuildInputs = [ diff --git a/pkgs/tools/misc/peruse/default.nix b/pkgs/tools/misc/peruse/default.nix index a3fdca001d94..38cab5cf8623 100644 --- a/pkgs/tools/misc/peruse/default.nix +++ b/pkgs/tools/misc/peruse/default.nix @@ -1,37 +1,30 @@ { mkDerivation, fetchFromGitHub, fetchurl, lib, extra-cmake-modules, kdoctools, wrapGAppsHook, - baloo, karchive, kconfig, kcrash, kfilemetadata, kinit, kirigami, knewstuff, plasma-framework + baloo, karchive, kconfig, kcrash, kfilemetadata, kinit, kirigami2, knewstuff, plasma-framework }: let pname = "peruse"; - version = "1.2"; - unarr = fetchFromGitHub { - owner = "zeniko"; - repo = "unarr"; - rev = "d1be8c43a82a4320306c8e835a86fdb7b2574ca7"; - sha256 = "03ds5da69zipa25rsp76l6xqivrh3wcgygwyqa5x2rgcz3rjnlpr"; - }; + version = "1.2.20180219"; + in mkDerivation rec { name = "${pname}-${version}"; - src = fetchurl { - url = "mirror://kde/stable/${pname}/${name}.tar.xz"; - sha256 = "1ik2627xynkichsq9x28rkczqn3l3p06q6vw5jdafdh3hisccmjq"; + # The last formal release from 2016 uses kirigami1 which is deprecated + src = fetchFromGitHub { + owner = "KDE"; + repo = pname; + rev = "4125d3149c45d196600258686610de701130113d"; + sha256 = "1x8in7z17gzgiibshw7xfs6m6bhr3n5fys3nlpab77nm0dl3f4r5"; }; nativeBuildInputs = [ extra-cmake-modules kdoctools wrapGAppsHook ]; - propagatedBuildInputs = [ baloo karchive kconfig kcrash kfilemetadata kinit kirigami knewstuff plasma-framework ]; + propagatedBuildInputs = [ baloo karchive kconfig kcrash kfilemetadata kinit kirigami2 knewstuff plasma-framework ]; pathsToLink = [ "/etc/xdg/peruse.knsrc"]; - preConfigure = '' - rm -rf src/qtquick/karchive-rar/external/unarr - ln -s ${unarr} src/qtquick/karchive-rar/external/unarr - ''; - meta = with lib; { license = licenses.gpl2; maintainers = with maintainers; [ peterhoeg ]; diff --git a/pkgs/tools/misc/powerline-go/default.nix b/pkgs/tools/misc/powerline-go/default.nix index 4e465e7ea1ca..e31c0da6306a 100644 --- a/pkgs/tools/misc/powerline-go/default.nix +++ b/pkgs/tools/misc/powerline-go/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { pname = "powerline-go"; - version = "1.8.2"; + version = "1.10.0"; name = "${pname}-${version}"; rev = "v${version}"; @@ -12,7 +12,7 @@ buildGoPackage rec { owner = "justjanne"; repo = pname; inherit rev; - sha256 = "1q45hxbrnx0mgi7z1rqkxp47dk8yf4mzy62i0027fhr65aifq6xj"; + sha256 = "1bmgim61cx6i4m24a474nm3w4zqjflm0wnw3y24299n9dj14izs3"; }; goDeps = ./deps.nix; diff --git a/pkgs/tools/misc/powerline-go/deps.nix b/pkgs/tools/misc/powerline-go/deps.nix index a3276ab229bb..78e28efb3b10 100644 --- a/pkgs/tools/misc/powerline-go/deps.nix +++ b/pkgs/tools/misc/powerline-go/deps.nix @@ -5,8 +5,17 @@ fetch = { type = "git"; url = "https://github.com/mattn/go-runewidth"; - rev = "a9d6d1e4dc51df2130326793d49971f238839169"; - sha256 = "1x6x5r6ijik5ardfrpncjbqvpv8j5m7yb94svzz83a15ln44ajmg"; + rev = "ce7b0b5c7b45a81508558cd1dba6bb1e4ddb51bb"; + sha256 = "0lc39b6xrxv7h3v3y1kgz49cgi5qxwlygs715aam6ba35m48yi7g"; + }; + } + { + goPackagePath = "github.com/shirou/gopsutil"; + fetch = { + type = "git"; + url = "https://github.com/shirou/gopsutil"; + rev = "63047d776e07105e370af46ecbd0ae96850f5ef2"; + sha256 = "0204f0gx3fd8ya6rb478a7a4gr2v4i3m71148iv3jrdfvr5q5aaw"; }; } { @@ -14,8 +23,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/crypto"; - rev = "91a49db82a88618983a78a06c1cbd4e00ab749ab"; - sha256 = "1xb4vlshx76xany4w60dkpz67plyfk7nr97pinf1bbha32pi36jc"; + rev = "2b6c08872f4b66da917bb4ce98df4f0307330f78"; + sha256 = "07wgdhs7ac3qmx0lfr4zazg2l159jqbwmn7jx49rr9811vivl1yh"; }; } { @@ -23,8 +32,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/sys"; - rev = "dd2ff4accc098aceecb86b36eaa7829b2a17b1c9"; - sha256 = "086j1kk56vm1m5m9sf3lcww9phqw6p2q3g0is1jn4ixfxd3wm2wg"; + rev = "79b0c6888797020a994db17c8510466c72fe75d9"; + sha256 = "0aydjw886c4dwcjg7ssb7xp39ag1529nh3ly1la71rqjr94cjnag"; }; } { @@ -32,8 +41,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/text"; - rev = "b7ef84aaf62aa3e70962625c80a571ae7c17cb40"; - sha256 = "0xfb515f3bmcq15sq1cm641qwgsmq1w5xjdx2mhwgns770jngndd"; + rev = "7922cc490dd5a7dbaa7fd5d6196b49db59ac042f"; + sha256 = "06sicjc24hv7v9p1l6psaq87w4lycx3mjixd6gsd1wnd4jhqvlnr"; }; } { @@ -41,8 +50,8 @@ fetch = { type = "git"; url = "https://gopkg.in/yaml.v2"; - rev = "7f97868eec74b32b0982dd158a51a446d1da7eb5"; - sha256 = "0a31jd1p00b9c82f3sfsbv2bdh7mlfy9vhcqxipll2cyvxplgfq8"; + rev = "5420a8b6744d3b0345ab293f6fcba19c978f1183"; + sha256 = "0dwjrs2lp2gdlscs7bsrmyc5yf6mm4fvgw71bzr9mv2qrd2q73s1"; }; } ] diff --git a/pkgs/tools/misc/rw/default.nix b/pkgs/tools/misc/rw/default.nix new file mode 100644 index 000000000000..345f26852dcb --- /dev/null +++ b/pkgs/tools/misc/rw/default.nix @@ -0,0 +1,28 @@ +{ stdenv, fetchurl }: + +stdenv.mkDerivation rec { + name = "rw-${version}"; + version = "1.0"; + + src = fetchurl { + url = "https://sortix.org/rw/release/rw-portable-${version}.tar.gz"; + # Use hash provided by upstream + sha256 = "50009730e36991dfe579716f91f4f616f5ba05ffb7bf69c03d41bf305ed93b6d"; + }; + + makeFlags = [ "PREFIX=$(out)" ]; + + meta = with stdenv.lib; { + homepage = https://sortix.org/rw; + description = "Block device and byte copying program similar to dd"; + longDescription = '' + rw is a command line program which copies information between files + or byte streams. The rw command is designed to be a replacement for + dd with standard style command line flags. + ''; + license = licenses.isc; + maintainers = with maintainers; [ dtzWill ]; + + broken = stdenv.hostPlatform.isDarwin; + }; +} diff --git a/pkgs/tools/misc/slop/default.nix b/pkgs/tools/misc/slop/default.nix index ad1c2b64e65d..f411bbd2c300 100644 --- a/pkgs/tools/misc/slop/default.nix +++ b/pkgs/tools/misc/slop/default.nix @@ -1,15 +1,17 @@ { stdenv, fetchFromGitHub, cmake, pkgconfig -, glew, glm, libGLU_combined, libX11, libXext, libXrender, cppcheck, icu}: +, glew, glm, libGLU_combined, libX11, libXext, libXrender, icu +, cppcheck +}: stdenv.mkDerivation rec { name = "slop-${version}"; - version = "7.3.49"; + version = "7.4"; src = fetchFromGitHub { owner = "naelstrof"; repo = "slop"; rev = "v${version}"; - sha256 = "0is3mh2d1jqgvv72v5x92w23yf26n8n384nbr1b6cn883aw8j7jz"; + sha256 = "0fgd8a2dqkg64all0f96sca92sdss9r3pzmv5kck46b99z2325z6"; }; nativeBuildInputs = [ cmake pkgconfig ]; diff --git a/pkgs/tools/misc/sweep-visualizer/default.nix b/pkgs/tools/misc/sweep-visualizer/default.nix new file mode 100644 index 000000000000..c1f3fbea8e5c --- /dev/null +++ b/pkgs/tools/misc/sweep-visualizer/default.nix @@ -0,0 +1,60 @@ +{ stdenv, lib, makeWrapper, fetchurl, + alsaLib, atk, cairo, cups, dbus, expat, fontconfig, freetype, gdk_pixbuf, glib, + gnome2, gtk2-x11, nspr, nss, + libX11, libxcb, libXcomposite, libXcursor, libXdamage, libXext, libXfixes, + libXi, libXrandr, libXrender, libXScrnSaver, libXtst, + libudev0-shim +}: + stdenv.mkDerivation rec { + name = "sweep-visualizer-${version}"; + version = "0.15.0"; + + src = fetchurl { + url = "https://s3.amazonaws.com/scanse/Visualizer/v${version}/sweepvisualizer_${version}_amd64.deb"; + sha256 = "1k6rdjw2340qrzafv6hjxvbvyh3s1wad6d3629nchdcrpyx9xy1c"; + }; + + nativeBuildInputs = [ makeWrapper ]; + + sourceRoot = "."; + unpackCmd = '' + ar p "$src" data.tar.xz | tar xJ + ''; + + buildPhase = ":"; + + installPhase = '' + mkdir -p $out/lib $out/bin $out/share/sweep-visualizer + mv usr/share/* $out/share + mv opt/Sweep\ Visualizer\ BETA/* $out/share/sweep-visualizer/ + mv $out/share/sweep-visualizer/*.so $out/lib/ + ln -s $out/share/sweep-visualizer/sweep_visualizer $out/bin/sweep_visualizer + ''; + + preFixup = let + libPath = lib.makeLibraryPath [ + alsaLib atk cairo cups.lib dbus.lib expat fontconfig.lib freetype + gdk_pixbuf glib gnome2.GConf gnome2.pango gtk2-x11 nspr nss stdenv.cc.cc.lib + libX11 libxcb libXcomposite libXcursor libXdamage libXext libXfixes + libXi libXrandr libXrender libXScrnSaver libXtst + ]; + runtimeLibs = lib.makeLibraryPath [ libudev0-shim ]; + in '' + for lib in $out/lib/*.so; do + patchelf --set-rpath "$out/lib:${libPath}" $lib + done + patchelf \ + --set-interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \ + --set-rpath "$out/lib:${libPath}" \ + $out/share/sweep-visualizer/sweep_visualizer + wrapProgram "$out/bin/sweep_visualizer" --prefix LD_LIBRARY_PATH : ${runtimeLibs} + ''; + + meta = with stdenv.lib; { + homepage = https://support.scanse.io/hc/en-us/articles/115006008948-Visualizer-Overview; + description = "A minimal desktop application for interfacing with the Sweep device"; + license = licenses.unfree; + platforms = [ "x86_64-linux" ]; + maintainers = with maintainers; [ mt-caret ]; + }; + } diff --git a/pkgs/tools/misc/thin-provisioning-tools/default.nix b/pkgs/tools/misc/thin-provisioning-tools/default.nix index 5d43679b6fe6..8b9fa4f2f3fc 100644 --- a/pkgs/tools/misc/thin-provisioning-tools/default.nix +++ b/pkgs/tools/misc/thin-provisioning-tools/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "thin-provisioning-tools-${version}"; - version = "0.6.3"; + version = "0.7.5"; src = fetchFromGitHub { owner = "jthornber"; repo = "thin-provisioning-tools"; rev = "v${version}"; - sha256 = "0glwhfzwj9afbqdv59ppgfqy7rik8m0vcap7279fpnvwpr1c2p5n"; + sha256 = "1ibg5wxrbqg4pr3f6aacqm42fxpwn5q00j8ldy9mw4an3ck41cwa"; }; nativeBuildInputs = [ autoreconfHook ]; diff --git a/pkgs/tools/misc/vdirsyncer/default.nix b/pkgs/tools/misc/vdirsyncer/default.nix index 9d1e4096776a..9e9ded5c3a76 100644 --- a/pkgs/tools/misc/vdirsyncer/default.nix +++ b/pkgs/tools/misc/vdirsyncer/default.nix @@ -1,18 +1,30 @@ -{ stdenv, fetchurl, python3Packages, glibcLocales }: +{ stdenv, python3Packages, glibcLocales, rustPlatform }: # Packaging documentation at: # https://github.com/untitaker/vdirsyncer/blob/master/docs/packaging.rst let pythonPackages = python3Packages; -in -pythonPackages.buildPythonApplication rec { - version = "0.16.4"; - name = "vdirsyncer-${version}"; - - src = fetchurl { - url = "mirror://pypi/v/vdirsyncer/${name}.tar.gz"; - sha256 = "03wva48bgv1ad3df6plc9b8xxh6k8bcaxrhlzwh81c9mzn5bspzv"; + version = "0.17.0a2"; + pname = "vdirsyncer"; + name = pname + "-" + version; + src = pythonPackages.fetchPypi { + inherit pname version; + sha256 = "0y464rsx5la6bp94z2g0nnkbl4nwfya08abynvifw4c84vs1gr4q"; }; + native = rustPlatform.buildRustPackage { + name = name + "-native"; + inherit src; + sourceRoot = name + "/rust"; + cargoSha256 = "1cr7xs11gbsc3x5slga9qahchwc22qq49amf28g4jgs9lzf57qis"; + postInstall = '' + mkdir $out/include $out/lib + cp $out/bin/libvdirsyncer_rustext* $out/lib + rm -r $out/bin + cp target/vdirsyncer_rustext.h $out/include + ''; + }; +in pythonPackages.buildPythonApplication rec { + inherit version pname src; propagatedBuildInputs = with pythonPackages; [ click click-log click-threading @@ -20,14 +32,33 @@ pythonPackages.buildPythonApplication rec { requests requests_oauthlib # required for google oauth sync atomicwrites + milksnake ]; - buildInputs = with pythonPackages; [hypothesis pytest pytest-localserver pytest-subtesthack setuptools_scm ] ++ [ glibcLocales ]; + buildInputs = with pythonPackages; [ setuptools_scm ]; + + checkInputs = with pythonPackages; [ hypothesis pytest pytest-localserver pytest-subtesthack ] ++ [ glibcLocales ]; + + postPatch = '' + sed -i "/cargo build/d" Makefile + ''; + + preBuild = '' + mkdir -p rust/target/release + ln -s ${native}/lib/libvdirsyncer_rustext* rust/target/release/ + ln -s ${native}/include/vdirsyncer_rustext.h rust/target/ + ''; LC_ALL = "en_US.utf8"; + preCheck = '' + ln -sf ../dist/tmpbuild/vdirsyncer/vdirsyncer/_native__lib.so vdirsyncer + ''; + checkPhase = '' + runHook preCheck make DETERMINISTIC_TESTS=true test + runHook postCheck ''; meta = with stdenv.lib; { diff --git a/pkgs/tools/misc/xfstests/default.nix b/pkgs/tools/misc/xfstests/default.nix index 6904f43d8469..e6c67ddb9bb8 100644 --- a/pkgs/tools/misc/xfstests/default.nix +++ b/pkgs/tools/misc/xfstests/default.nix @@ -3,16 +3,20 @@ , time, utillinux, which, writeScript, xfsprogs }: stdenv.mkDerivation { - name = "xfstests-2017-07-16"; + name = "xfstests-2018-04-11"; src = fetchgit { url = "git://git.kernel.org/pub/scm/fs/xfs/xfstests-dev.git"; - rev = "c3893c2dc623a07b1ace8e72ee4beb29f8bfae15"; - sha256 = "1p42dakry4r2366hdgj4i1wcnjs4qk0bfmyr70r1n7s7ykvnvnrl"; + rev = "fdf6d4bc862bb3269c95986fdaf1c59271762ad6"; + sha256 = "16j1kcmj0xq6s2qw4hll5r5cz7q4vbbsy2nh1g5aaq7xsl3h8mhb"; }; - nativeBuildInputs = [ autoconf automake libtool ]; - buildInputs = [ acl attr gawk libaio libuuid libxfs openssl perl ]; + nativeBuildInputs = [ + autoconf automake libtool + ]; + buildInputs = [ + acl attr gawk libaio libuuid libxfs openssl perl + ]; hardeningDisable = [ "format" ]; enableParallelBuilding = true; diff --git a/pkgs/tools/misc/you-get/default.nix b/pkgs/tools/misc/you-get/default.nix index 795c2ab191d1..f0a8eda00285 100644 --- a/pkgs/tools/misc/you-get/default.nix +++ b/pkgs/tools/misc/you-get/default.nix @@ -2,7 +2,7 @@ buildPythonApplication rec { pname = "you-get"; - version = "0.4.1040"; + version = "0.4.1060"; # Tests aren't packaged, but they all hit the real network so # probably aren't suitable for a build environment anyway. @@ -10,7 +10,7 @@ buildPythonApplication rec { src = fetchPypi { inherit pname version; - sha256 = "fdc9021e8b1cf936aad4bd6c74b80ea8fa3573b807c41242ba781e247f8c8ca8"; + sha256 = "1c4drn6khqrjvyzzsiaracnpcvahbiya6v5p18h2lyl7xia8gk51"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/misc/youtube-dl/default.nix b/pkgs/tools/misc/youtube-dl/default.nix index cbfbf77739ba..1f7d8c549e42 100644 --- a/pkgs/tools/misc/youtube-dl/default.nix +++ b/pkgs/tools/misc/youtube-dl/default.nix @@ -16,11 +16,11 @@ with stdenv.lib; buildPythonApplication rec { pname = "youtube-dl"; - version = "2018.03.26.1"; + version = "2018.04.16"; src = fetchurl { url = "https://yt-dl.org/downloads/${version}/${pname}-${version}.tar.gz"; - sha256 = "1sbapwx2zdhprvmljqs6rzxnhiyfpxgin7qyjdrg6h25hhq63vss"; + sha256 = "046zg8pww2xg1yibh7c1a8jcg8f1znr4hsz1l1da03djcp6na99d"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/tools/networking/chrony/default.nix b/pkgs/tools/networking/chrony/default.nix index 5ddb663a4ae5..1299c5eea5f3 100644 --- a/pkgs/tools/networking/chrony/default.nix +++ b/pkgs/tools/networking/chrony/default.nix @@ -6,11 +6,11 @@ assert stdenv.isLinux -> libcap != null; stdenv.mkDerivation rec { name = "chrony-${version}"; - version = "3.2"; + version = "3.3"; src = fetchurl { url = "http://download.tuxfamily.org/chrony/${name}.tar.gz"; - sha256 = "05j17i1zlg19v8jkzlp710kbdgnb4541zgkqxqzcwglcvlc6g7rj"; + sha256 = "0a1ilzr88xhzx1ql3xhn36a4rvl79hvp0dvgm3az4cjhhzav47qd"; }; buildInputs = [ readline texinfo nss nspr ] diff --git a/pkgs/tools/networking/cjdns/default.nix b/pkgs/tools/networking/cjdns/default.nix index d16e730b5abf..817da08c05e3 100644 --- a/pkgs/tools/networking/cjdns/default.nix +++ b/pkgs/tools/networking/cjdns/default.nix @@ -16,7 +16,7 @@ stdenv.mkDerivation { stdenv.lib.optional stdenv.isLinux utillinux; buildPhase = - stdenv.lib.optionalString stdenv.isArm "Seccomp_NO=1 " + stdenv.lib.optionalString stdenv.isAarch32 "Seccomp_NO=1 " + "bash do"; installPhase = '' install -Dt "$out/bin/" cjdroute makekeys privatetopublic publictoip6 diff --git a/pkgs/tools/networking/connman-gtk/default.nix b/pkgs/tools/networking/connman/connman-gtk/default.nix index d5688354a76d..d5688354a76d 100644 --- a/pkgs/tools/networking/connman-gtk/default.nix +++ b/pkgs/tools/networking/connman/connman-gtk/default.nix diff --git a/pkgs/tools/networking/connman-ncurses/default.nix b/pkgs/tools/networking/connman/connman-ncurses/default.nix index 8c4d4fa84865..8c4d4fa84865 100644 --- a/pkgs/tools/networking/connman-ncurses/default.nix +++ b/pkgs/tools/networking/connman/connman-ncurses/default.nix diff --git a/pkgs/tools/networking/connman-notify/default.nix b/pkgs/tools/networking/connman/connman-notify/default.nix index 42b0c37411c8..42b0c37411c8 100644 --- a/pkgs/tools/networking/connman-notify/default.nix +++ b/pkgs/tools/networking/connman/connman-notify/default.nix diff --git a/pkgs/tools/networking/connman_dmenu/default.nix b/pkgs/tools/networking/connman/connman_dmenu/default.nix index c39c82df634c..c39c82df634c 100644 --- a/pkgs/tools/networking/connman_dmenu/default.nix +++ b/pkgs/tools/networking/connman/connman_dmenu/default.nix diff --git a/pkgs/tools/networking/connmanui/default.nix b/pkgs/tools/networking/connman/connmanui/default.nix index 7c42cc965a00..7c42cc965a00 100644 --- a/pkgs/tools/networking/connmanui/default.nix +++ b/pkgs/tools/networking/connman/connmanui/default.nix diff --git a/pkgs/tools/networking/ddclient/default.nix b/pkgs/tools/networking/ddclient/default.nix index 6d3ca27df1d6..93828c10d135 100644 --- a/pkgs/tools/networking/ddclient/default.nix +++ b/pkgs/tools/networking/ddclient/default.nix @@ -9,6 +9,7 @@ buildPerlPackage rec { sha256 = "1j8zdn7fy7i0bjk3jf0hxnbnshc2yf054vxq64imxdpfd7n5zgfy"; }; + # perl packages by default get devdoc which isn't present outputs = [ "out" ]; buildInputs = with perlPackages; [ IOSocketSSL DigestSHA1 ]; @@ -25,7 +26,12 @@ buildPerlPackage rec { ''; installPhase = '' + runHook preInstall + install -Dm755 ddclient $out/bin/ddclient + install -Dm644 -t $out/share/doc/ddclient COP* ChangeLog README.* RELEASENOTE + + runHook postInstall ''; # there are no tests distributed with ddclient diff --git a/pkgs/tools/networking/filegive/default.nix b/pkgs/tools/networking/filegive/default.nix index d20cb3c37859..3dfd136ad060 100644 --- a/pkgs/tools/networking/filegive/default.nix +++ b/pkgs/tools/networking/filegive/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, fetchgit, go }: -assert stdenv.isLinux && (stdenv.isi686 || stdenv.isx86_64 || stdenv.isArm); +assert stdenv.isLinux && (stdenv.isi686 || stdenv.isx86_64 || stdenv.isAarch32); let diff --git a/pkgs/tools/networking/gupnp-tools/default.nix b/pkgs/tools/networking/gupnp-tools/default.nix index 1b306bc5e363..4d1796eb2ac9 100644 --- a/pkgs/tools/networking/gupnp-tools/default.nix +++ b/pkgs/tools/networking/gupnp-tools/default.nix @@ -2,13 +2,13 @@ let pname = "gupnp-tools"; - version = "0.8.13"; + version = "0.8.14"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; src = fetchurl { url = "mirror://gnome/sources/${pname}/${stdenv.lib.versions.majorMinor version}/${name}.tar.xz"; - sha256 = "1vbr4iqi7nl7kq982agd3liw10gx67s95idd0pjy5h1jsnwyqgda"; + sha256 = "1ykybsljjnngj8rsn808a0h37r2jx99c2jbmsb3ihf7l7hmraav8"; }; nativeBuildInputs = [ pkgconfig intltool wrapGAppsHook ]; diff --git a/pkgs/tools/networking/i2p/default.nix b/pkgs/tools/networking/i2p/default.nix index 58533f683e71..e2049967e889 100644 --- a/pkgs/tools/networking/i2p/default.nix +++ b/pkgs/tools/networking/i2p/default.nix @@ -27,10 +27,10 @@ let wrapper = stdenv.mkDerivation rec { in stdenv.mkDerivation rec { - name = "i2p-0.9.33"; + name = "i2p-0.9.34"; src = fetchurl { url = "https://github.com/i2p/i2p.i2p/archive/${name}.tar.gz"; - sha256 = "1hlildi34p34xgpm0gqh09r2jb6nsa7a52gr074r6203xkl2racw"; + sha256 = "1b3qw096b9i55izvrh2793sbg0ikvihfi6k15sz2pzmjn30hy37l"; }; buildInputs = [ jdk ant gettext which ]; patches = [ ./i2p.patch ]; diff --git a/pkgs/tools/networking/lldpd/default.nix b/pkgs/tools/networking/lldpd/default.nix index 20e65c5ea3ca..02e4672a1aee 100644 --- a/pkgs/tools/networking/lldpd/default.nix +++ b/pkgs/tools/networking/lldpd/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "lldpd-${version}"; - version = "0.9.9"; + version = "1.0.1"; src = fetchurl { url = "https://media.luffy.cx/files/lldpd/${name}.tar.gz"; - sha256 = "1nq2z03hbs5qc3kdk3rdxcwcsrxilhcqx7xw3iipc4yj03shi7jy"; + sha256 = "0lgiappbjm95r1m0xyxb6gzz4izcjixknbzq3s7pbqbsmhm642s5"; }; configureFlags = [ diff --git a/pkgs/tools/networking/mailutils/default.nix b/pkgs/tools/networking/mailutils/default.nix index c85aaea6f3b9..26bfd27bf9a6 100644 --- a/pkgs/tools/networking/mailutils/default.nix +++ b/pkgs/tools/networking/mailutils/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, fetchpatch, autoreconfHook, dejagnu, gettext, pkgconfig , gdbm, pam, readline, ncurses, gnutls, guile, texinfo, gnum4, sasl, fribidi, nettools -, python, gss, mysql }: +, python, gss, mysql, sendmailPath ? "/run/wrappers/bin/sendmail" }: let p = "https://raw.githubusercontent.com/gentoo/gentoo/9c921e89d51876fd876f250324893fd90c019326/net-mail/mailutils/files"; @@ -41,6 +41,7 @@ in stdenv.mkDerivation rec { "--with-gssapi" "--with-gsasl" "--with-mysql" + "--with-path-sendmail=${sendmailPath}" ]; readmsg-tests = stdenv.lib.optionals doCheck [ diff --git a/pkgs/tools/networking/network-manager-applet/default.nix b/pkgs/tools/networking/network-manager/applet.nix index dd32cebea111..ecd10a139766 100644 --- a/pkgs/tools/networking/network-manager-applet/default.nix +++ b/pkgs/tools/networking/network-manager/applet.nix @@ -32,7 +32,10 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ meson ninja intltool pkgconfig wrapGAppsHook gobjectIntrospection gtk-doc docbook_xsl libxml2 ]; - propagatedUserEnvPkgs = [ hicolor-icon-theme ]; + propagatedUserEnvPkgs = [ + hicolor-icon-theme + gnome3.gnome-keyring # See https://github.com/NixOS/nixpkgs/issues/38967 + ]; NIX_CFLAGS = [ ''-DMOBILE_BROADBAND_PROVIDER_INFO=\"${mobile-broadband-provider-info}/share/mobile-broadband-provider-info/serviceproviders.xml\"'' diff --git a/pkgs/tools/networking/networkmanager_dmenu/default.nix b/pkgs/tools/networking/network-manager/dmenu.nix index 82810e714d52..82810e714d52 100644 --- a/pkgs/tools/networking/networkmanager_dmenu/default.nix +++ b/pkgs/tools/networking/network-manager/dmenu.nix diff --git a/pkgs/tools/networking/p2p/seeks/default.nix b/pkgs/tools/networking/p2p/seeks/default.nix index cddfb9621dc5..f11c0a63b07e 100644 --- a/pkgs/tools/networking/p2p/seeks/default.nix +++ b/pkgs/tools/networking/p2p/seeks/default.nix @@ -64,5 +64,6 @@ stdenv.mkDerivation { stdenv.lib.maintainers.matejc ]; platforms = stdenv.lib.platforms.gnu; # arbitrary choice + broken = true; # 2018-04-11 }; } diff --git a/pkgs/tools/networking/shadowsocks-libev/default.nix b/pkgs/tools/networking/shadowsocks-libev/default.nix index 46fd9e54950a..cbbc36b383bf 100644 --- a/pkgs/tools/networking/shadowsocks-libev/default.nix +++ b/pkgs/tools/networking/shadowsocks-libev/default.nix @@ -1,47 +1,32 @@ -{ withMbedTLS ? true -, enableSystemSharedLib ? true -, stdenv, fetchurl, zlib -, openssl ? null -, mbedtls ? null -, libev ? null -, libsodium ? null -, udns ? null -, asciidoc -, xmlto -, docbook_xml_dtd_45 -, docbook_xsl -, libxslt -, pcre +{ stdenv, fetchurl, fetchgit, cmake +, libsodium, mbedtls, libev, c-ares, pcre +, asciidoc, xmlto, docbook_xml_dtd_45, docbook_xsl, libxslt }: -let - - version = "2.5.5"; - sha256 = "46a72367b7301145906185f1e4136e39d6792d27643826e409ab708351b6d0dd"; - -in - -with stdenv.lib; - stdenv.mkDerivation rec { name = "shadowsocks-libev-${version}"; - src = fetchurl { - url = "https://github.com/shadowsocks/shadowsocks-libev/archive/v${version}.tar.gz"; - inherit sha256; + version = "3.1.3"; + + # Git tag includes CMake build files which are much more convenient. + # fetchgit because submodules. + src = fetchgit { + url = "https://github.com/shadowsocks/shadowsocks-libev"; + rev = "refs/tags/v${version}"; + sha256 = "16q91xh6ixfv7b5rl31an11101irv08119klfx5qgj4i6h7c41s7"; }; - buildInputs = [ zlib asciidoc xmlto docbook_xml_dtd_45 docbook_xsl libxslt pcre ] - ++ optional (!withMbedTLS) openssl - ++ optional withMbedTLS mbedtls - ++ optionals enableSystemSharedLib [libev libsodium udns]; + buildInputs = [ libsodium mbedtls libev c-ares pcre ]; + nativeBuildInputs = [ cmake asciidoc xmlto docbook_xml_dtd_45 docbook_xsl libxslt ]; + + cmakeFlags = [ "-DWITH_STATIC=OFF" ]; - configureFlags = optional withMbedTLS - [ "--with-crypto-library=mbedtls" - "--with-mbedtls=${mbedtls}" - ] - ++ optional enableSystemSharedLib "--enable-system-shared-lib"; + postInstall = '' + cp lib/* $out/lib + chmod +x $out/bin/* + mv $out/pkgconfig $out/lib + ''; - meta = { + meta = with stdenv.lib; { description = "A lightweight secured SOCKS5 proxy"; longDescription = '' Shadowsocks-libev is a lightweight secured SOCKS5 proxy for embedded devices and low-end boxes. @@ -50,6 +35,6 @@ stdenv.mkDerivation rec { homepage = https://github.com/shadowsocks/shadowsocks-libev; license = licenses.gpl3Plus; maintainers = [ maintainers.nfjinjing ]; - platforms = platforms.all; + platforms = platforms.linux; }; } diff --git a/pkgs/tools/package-management/nix-pin/default.nix b/pkgs/tools/package-management/nix-pin/default.nix index c12b82a61e17..bb3a1faa0c3b 100644 --- a/pkgs/tools/package-management/nix-pin/default.nix +++ b/pkgs/tools/package-management/nix-pin/default.nix @@ -1,12 +1,12 @@ { pkgs, stdenv, fetchFromGitHub, mypy, python3 }: let self = stdenv.mkDerivation rec { name = "nix-pin-${version}"; - version = "0.1.2"; + version = "0.2.2"; src = fetchFromGitHub { owner = "timbertson"; repo = "nix-pin"; - rev = "version-0.1.2"; - sha256 = "1zwfb5198qzbjwivgiaxbwva9frgrrqaj92nw8vz95yi08pijssh"; + rev = "version-0.2.2"; + sha256 = "1kw43kzy4m6lnnif51r2a8i4vcgr7d4vqb1c75p7pk2b9y3jwxsz"; }; buildInputs = [ python3 mypy ]; buildPhase = '' @@ -16,12 +16,27 @@ let self = stdenv.mkDerivation rec { mkdir "$out" cp -r bin share "$out" ''; - passthru = { - callWithPins = path: args: - import "${self}/share/nix/call.nix" { - inherit pkgs path args; - }; - }; + passthru = + let + defaults = import "${self}/share/nix/defaults.nix"; + in { + api = { pinConfig ? defaults.pinConfig }: + let impl = import "${self}/share/nix/api.nix" { inherit pkgs pinConfig; }; in + { inherit (impl) augmentedPkgs pins callPackage; }; + updateScript = '' + set -e + echo + cd ${toString ./.} + ${pkgs.nix-update-source}/bin/nix-update-source \ + --prompt version \ + --replace-attr version \ + --set owner timbertson \ + --set repo nix-pin \ + --set type fetchFromGitHub \ + --set rev 'version-{version}' \ + --modify-nix default.nix + ''; + }; meta = with stdenv.lib; { homepage = "https://github.com/timbertson/nix-pin"; description = "nixpkgs development utility"; diff --git a/pkgs/tools/package-management/nix-review/default.nix b/pkgs/tools/package-management/nix-review/default.nix index 2b813638a11a..14b234c4dd5a 100644 --- a/pkgs/tools/package-management/nix-review/default.nix +++ b/pkgs/tools/package-management/nix-review/default.nix @@ -7,13 +7,13 @@ python3.pkgs.buildPythonApplication rec { pname = "nix-review"; - version = "0.1.2"; + version = "0.2.0"; src = fetchFromGitHub { owner = "Mic92"; repo = "nix-review"; rev = version; - sha256 = "06lj3q6405fw18fq1xg0bm52cwlwx94lx5hn4zpz3rxl5g49wiyz"; + sha256 = "138f9m2c8fwpvn3kv5q7845ffi1pjbqxcs44aych4832i0pn6jaf"; }; buildInputs = [ makeWrapper ]; diff --git a/pkgs/tools/package-management/nix-update-source/default.nix b/pkgs/tools/package-management/nix-update-source/default.nix index a156c4f8a722..fe3cf33b46c8 100644 --- a/pkgs/tools/package-management/nix-update-source/default.nix +++ b/pkgs/tools/package-management/nix-update-source/default.nix @@ -1,12 +1,12 @@ { lib, pkgs, fetchFromGitHub, python3Packages, nix-prefetch-scripts }: python3Packages.buildPythonApplication rec { - version = "0.4.0"; + version = "0.5.0"; name = "nix-update-source-${version}"; src = fetchFromGitHub { owner = "timbertson"; repo = "nix-update-source"; - rev = "version-0.4.0"; - sha256 = "0gz0f7nx1q697s16ya7q84q1cj020n547k2ffb99ds2r40nckr2g"; + rev = "version-0.5.0"; + sha256 = "13icwk249frddsmn9albasikwp8asmgvp3jf9xj9adzh63wzh1i7"; }; propagatedBuildInputs = [ nix-prefetch-scripts ]; passthru = { @@ -23,7 +23,10 @@ python3Packages.buildPythonApplication rec { fetchFn = builtins.getAttr json.fetch.fn fetchers; src = fetchFn json.fetch.args; in - json // json.fetch // { inherit src; }; + json // json.fetch // { + inherit src; + overrideSrc = drv: lib.overrideDerivation drv (orig: { inherit src; }); + }; updateScript = '' set -e echo diff --git a/pkgs/tools/package-management/nix/default.nix b/pkgs/tools/package-management/nix/default.nix index abc93c264fc0..aee6678d1167 100644 --- a/pkgs/tools/package-management/nix/default.nix +++ b/pkgs/tools/package-management/nix/default.nix @@ -95,16 +95,19 @@ let passthru = { inherit fromGit; }; }; - perl-bindings = { nix }: stdenv.mkDerivation { + perl-bindings = { nix, needsBoost ? false }: stdenv.mkDerivation { name = "nix-perl-" + nix.version; inherit (nix) src; postUnpack = "sourceRoot=$sourceRoot/perl"; + # This is not cross-compile safe, don't have time to fix right now + # but noting for future travellers. nativeBuildInputs = [ perl pkgconfig curl nix libsodium ] - ++ lib.optionals nix.fromGit [ autoreconfHook autoconf-archive ]; + ++ lib.optionals nix.fromGit [ autoreconfHook autoconf-archive ] + ++ lib.optional needsBoost boost; configureFlags = [ "--with-dbi=${perlPackages.DBI}/${perl.libPrefix}" @@ -129,23 +132,26 @@ in rec { }) // { perl-bindings = nixStable; }; nixStable = (common rec { - name = "nix-2.0"; + name = "nix-2.0.1"; src = fetchurl { url = "http://nixos.org/releases/nix/${name}/${name}.tar.xz"; - sha256 = "7024d327314bf92c1d3e6cccd944929828a44b24093954036bfb0115a92f5a14"; + sha256 = "689c33b9885b56b7817bf94aad3bc7ccf50710ebb34b01c5a5a2ac4e472750b1"; }; }) // { perl-bindings = perl-bindings { nix = nixStable; }; }; nixUnstable = (lib.lowPrio (common rec { - name = "nix-2.0${suffix}"; - suffix = "pre6137_e3cdcf89"; + name = "nix-2.1${suffix}"; + suffix = "pre6148_a4aac7f"; src = fetchFromGitHub { owner = "NixOS"; repo = "nix"; - rev = "e3cdcf89b0ef42f81c9df5899776ea225f1ecae0"; - sha256 = "1s9w7ixc2qra3x9545f9a634654rvdqsf38jp9b7wr6xx6qqx60s"; + rev = "a4aac7f88c59c97299027c9668461c637bbc6a72"; + sha256 = "1250fg1rgzcd0qy960nhl2bw9hsc1a6pyz11rmxasr0h3j1a2z53"; }; fromGit = true; - })) // { perl-bindings = perl-bindings { nix = nixUnstable; }; }; + })) // { perl-bindings = perl-bindings { + nix = nixUnstable; + needsBoost = true; + }; }; } diff --git a/pkgs/tools/security/bash-supergenpass/default.nix b/pkgs/tools/security/bash-supergenpass/default.nix index f85d847f5f95..59be6ed0ec26 100644 --- a/pkgs/tools/security/bash-supergenpass/default.nix +++ b/pkgs/tools/security/bash-supergenpass/default.nix @@ -2,15 +2,15 @@ stdenv.mkDerivation rec { name = "bash-supergenpass-unstable-${version}"; - version = "2012-11-02"; + version = "2018-04-18"; nativeBuildInputs = [ makeWrapper ]; src = fetchFromGitHub { owner = "lanzz"; repo = "bash-supergenpass"; - rev = "c84eaa22fb59ab6c390e7f2de7984513347e3a9a"; - sha256 = "0d3l55kdrf6arb98vwwz9ww55ing5w323fg7546v56hlq3hs5qc9"; + rev = "ece772b9ec095946ac4ea985cda5561b211e56f0"; + sha256 = "1gkbrycyyl7y3klbfx7xjvvfw5df1h4fj6x1f73gglfy6nk8ffnd"; }; installPhase = '' diff --git a/pkgs/tools/security/browserpass/default.nix b/pkgs/tools/security/browserpass/default.nix index a4656b5db046..c7ed511753d4 100644 --- a/pkgs/tools/security/browserpass/default.nix +++ b/pkgs/tools/security/browserpass/default.nix @@ -1,5 +1,5 @@ # This file was generated by https://github.com/kamilchm/go2nix v1.2.1 -{ stdenv, buildGoPackage, fetchFromGitHub }: +{ stdenv, buildGoPackage, fetchFromGitHub, gnupg }: buildGoPackage rec { name = "browserpass-${version}"; @@ -16,6 +16,11 @@ buildGoPackage rec { sha256 = "0wszjpxfa0krr2zdx7a33vl1r86k74dpy5c940r6ww1zbgqzcibg"; }; + postPatch = '' + substituteInPlace browserpass.go \ + --replace /usr/local/bin/gpg ${gnupg}/bin/gpg + ''; + postInstall = '' host_file="$bin/bin/browserpass" mkdir -p "$bin/etc" diff --git a/pkgs/tools/security/fail2ban/default.nix b/pkgs/tools/security/fail2ban/default.nix index 23061b6962e8..30e8d4303dc1 100644 --- a/pkgs/tools/security/fail2ban/default.nix +++ b/pkgs/tools/security/fail2ban/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchFromGitHub, python, pythonPackages, gamin }: -let version = "0.10.2"; in +let version = "0.10.3.1"; in pythonPackages.buildPythonApplication { name = "fail2ban-${version}"; @@ -9,7 +9,7 @@ pythonPackages.buildPythonApplication { owner = "fail2ban"; repo = "fail2ban"; rev = version; - sha256 = "1asn9gp0ybz6fak991vki9vln4ijramvr13rbwpxyj5wfmnh05r5"; + sha256 = "03gljmqykwwvwxcfhqqfccmnsjhsl93052i38r9mf7hj4jj8v7x5"; }; propagatedBuildInputs = [ gamin ] diff --git a/pkgs/tools/security/gencfsm/default.nix b/pkgs/tools/security/gencfsm/default.nix index 7f6f28593d20..3a9c81df2343 100644 --- a/pkgs/tools/security/gencfsm/default.nix +++ b/pkgs/tools/security/gencfsm/default.nix @@ -35,5 +35,6 @@ stdenv.mkDerivation rec { license = licenses.gpl2Plus; platforms = platforms.linux; maintainers = [ maintainers.spacefrogg ]; + broken = true; # 2018-04-10 }; } diff --git a/pkgs/tools/security/gnupg/22.nix b/pkgs/tools/security/gnupg/22.nix index 860c90eb4c9d..87dcbe4e7066 100644 --- a/pkgs/tools/security/gnupg/22.nix +++ b/pkgs/tools/security/gnupg/22.nix @@ -15,11 +15,11 @@ assert guiSupport -> pinentry != null; stdenv.mkDerivation rec { name = "gnupg-${version}"; - version = "2.2.5"; + version = "2.2.6"; src = fetchurl { url = "mirror://gnupg/gnupg/${name}.tar.bz2"; - sha256 = "0mzgibq4dpxh3i9anmwg12xdjry28y83icafhx3j3djg5niqk89z"; + sha256 = "110rf476l3cgn52gh9ia5y0y06y2ialq9dqc12jkhnfhl9gqqkg6"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/security/keybase-gui/default.nix b/pkgs/tools/security/keybase/gui.nix index 1d50f5498c83..1d50f5498c83 100644 --- a/pkgs/tools/security/keybase-gui/default.nix +++ b/pkgs/tools/security/keybase/gui.nix diff --git a/pkgs/tools/security/logkeys/default.nix b/pkgs/tools/security/logkeys/default.nix index e30ad30a4dc1..8a73d056b1ed 100644 --- a/pkgs/tools/security/logkeys/default.nix +++ b/pkgs/tools/security/logkeys/default.nix @@ -1,13 +1,14 @@ -{ stdenv, fetchgit, autoconf, automake, which, procps, kbd }: +{ stdenv, fetchFromGitHub, autoconf, automake, which, procps, kbd }: stdenv.mkDerivation rec { name = "logkeys-${version}"; - version = "2017-10-10"; + version = "2018-01-22"; - src = fetchgit { - url = https://github.com/kernc/logkeys; - rev = "5c368327a2cd818efaed4794633c260b90b87abf"; - sha256 = "0akj7j775y9c0p53zq5v12jk3fy030fpdvn5m1x9w4rdj47vxdpg"; + src = fetchFromGitHub { + owner = "kernc"; + repo = "logkeys"; + rev = "7a9f19fb6b152d9f00a0b3fe29ab266ff1f88129"; + sha256 = "1k6kj0913imwh53lh6hrhqmrpygqg2h462raafjsn7gbd3vkgx8n"; }; buildInputs = [ autoconf automake which procps kbd ]; diff --git a/pkgs/tools/security/pinentry-mac/default.nix b/pkgs/tools/security/pinentry/mac.nix index e555889d1abb..e555889d1abb 100644 --- a/pkgs/tools/security/pinentry-mac/default.nix +++ b/pkgs/tools/security/pinentry/mac.nix diff --git a/pkgs/tools/security/scallion/default.nix b/pkgs/tools/security/scallion/default.nix new file mode 100644 index 000000000000..75ea92a786c5 --- /dev/null +++ b/pkgs/tools/security/scallion/default.nix @@ -0,0 +1,36 @@ +{ stdenv, fetchFromGitHub, makeWrapper, mono, openssl, ocl-icd }: + +stdenv.mkDerivation rec { + version = "2.1"; + name = "scallion-${version}"; + + src = fetchFromGitHub { + owner = "lachesis"; + repo = "scallion"; + rev = "v${version}"; + sha256 = "1l9aj101xpsaaa6kmmhmq68m6z8gzli1iaaf8xaxbivq0i7vka9k"; + }; + + nativeBuildInputs = [ makeWrapper ]; + buildInputs = [ mono ]; + + buildPhase = '' + xbuild scallion.sln + ''; + + installPhase = '' + mkdir -p $out/share + cp scallion/bin/Debug/* $out/share/ + makeWrapper ${mono}/bin/mono $out/bin/scallion \ + --prefix LD_LIBRARY_PATH : ${stdenv.lib.makeLibraryPath [ openssl ocl-icd ]} \ + --add-flags $out/share/scallion.exe + ''; + + meta = with stdenv.lib; { + description = "GPU-based tor hidden service name generator"; + homepage = src.meta.homepage; + license = licenses.mit; + platforms = [ "x86_64-linux" ]; + maintainers = with maintainers; [ volth ]; + }; +} diff --git a/pkgs/tools/security/spectre-meltdown-checker/default.nix b/pkgs/tools/security/spectre-meltdown-checker/default.nix index 0baa1538ea15..ba5defbe2151 100644 --- a/pkgs/tools/security/spectre-meltdown-checker/default.nix +++ b/pkgs/tools/security/spectre-meltdown-checker/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "spectre-meltdown-checker-${version}"; - version = "0.36"; + version = "0.37"; src = fetchFromGitHub { owner = "speed47"; repo = "spectre-meltdown-checker"; rev = "v${version}"; - sha256 = "0pcw300hizzm130d0ip7j0ivf53sjlv6qzsdk9l68bj2lpx9n3kd"; + sha256 = "0g1p12jbraj0q5qpvqnbg5v1jwlcx6h04xz5s7jds51l7gf5f9np"; }; prePatch = '' @@ -19,8 +19,8 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ makeWrapper ]; installPhase = with stdenv.lib; '' - install -Dt $out/lib spectre-meltdown-checker.sh - makeWrapper $out/lib/spectre-meltdown-checker.sh $out/bin/spectre-meltdown-checker \ + install -D spectre-meltdown-checker.sh $out/bin/spectre-meltdown-checker + wrapProgram $out/bin/spectre-meltdown-checker \ --prefix PATH : ${makeBinPath [ binutils-unwrapped ]} ''; diff --git a/pkgs/tools/security/vulnix/default.nix b/pkgs/tools/security/vulnix/default.nix index b2cbb005ae7c..b28fa7cfd475 100644 --- a/pkgs/tools/security/vulnix/default.nix +++ b/pkgs/tools/security/vulnix/default.nix @@ -1,16 +1,17 @@ -{ stdenv, pythonPackages, fetchurl, callPackage, nix }: +{ stdenv, pythonPackages, fetchurl, callPackage, nix, ronn }: pythonPackages.buildPythonApplication rec { - name = "${pname}-${version}"; pname = "vulnix"; - version = "1.4.0"; + version = "1.6.1"; src = pythonPackages.fetchPypi { inherit pname version; - sha256 = "19kfqxlrigrgwn74x06m70ar2fhyhic5kfmdanjwjcbaxblha3l8"; + sha256 = "0j6v6phq3naqnpvzxxnynsyv9y7bhig1gzvg594qpknqgyzj16bf"; }; - buildInputs = with pythonPackages; [ flake8 pytest pytestcov ]; + buildInputs = + [ ronn ] ++ + (with pythonPackages; [ freezegun pytest pytestcov ]); propagatedBuildInputs = [ nix @@ -20,14 +21,31 @@ pythonPackages.buildPythonApplication rec { lxml pyyaml requests + toml zodb ]); - postPatch = '' - sed -i -e 's/==\([^=]\+\)/>=\1/g' setup.py + outputs = [ "out" "doc" ]; + + # pytest-flake8 is currently broken + # re-enable after it has been fixed + # https://github.com/NixOS/nixpkgs/issues/39206 + patches = [ ./disable-flake8.patch ]; + + postBuild = '' + make -C doc + ''; + + checkPhase = "py.test src/vulnix"; + + postInstall = '' + install -D -t $out/share/man/man1 doc/vulnix.1 + install -D -t $out/share/man/man5 doc/vulnix-whitelist.5 + install -D -t $doc/share/doc/vulnix README.rst CHANGES.rst + gzip $doc/share/doc/vulnix/*.rst ''; - checkPhase = "py.test"; + dontStrip = true; meta = with stdenv.lib; { description = "NixOS vulnerability scanner"; diff --git a/pkgs/tools/security/vulnix/disable-flake8.patch b/pkgs/tools/security/vulnix/disable-flake8.patch new file mode 100644 index 000000000000..cd165d05ccc1 --- /dev/null +++ b/pkgs/tools/security/vulnix/disable-flake8.patch @@ -0,0 +1,23 @@ +diff --git a/setup.cfg b/setup.cfg +index a9e37ce..41b9886 100644 +--- a/setup.cfg ++++ b/setup.cfg +@@ -1,5 +1,5 @@ + [tool:pytest] +-addopts = --flake8 --tb=native --cov=src --cov-report=html --junitxml=report.xml -m 'not jenkinsonly' src/vulnix ++addopts = --tb=native --cov=src --cov-report=html --junitxml=report.xml -m 'not jenkinsonly' src/vulnix + markers = slow: This is a non-unit test and thus is not run by default. Use ``-m slow`` to run these, or ``-m 1`` to run all tests. + + [aliases] +diff --git a/setup.py b/setup.py +index a9315e5..d14ad59 100644 +--- a/setup.py ++++ b/setup.py +@@ -35,7 +35,6 @@ setup( + 'freezegun>0.3', + 'pytest>=3.2', + 'pytest-cov>=2.5', +- 'pytest-flake8', + 'pytest-runner>=2.11,<3dev', + 'pytest-timeout>=1.2', + 'setuptools_scm>=1.15', diff --git a/pkgs/tools/system/di/default.nix b/pkgs/tools/system/di/default.nix index 8bc94b64be99..54c9bbb14060 100644 --- a/pkgs/tools/system/di/default.nix +++ b/pkgs/tools/system/di/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "di-${version}"; - version = "4.44"; + version = "4.45"; src = fetchurl { url = "http://gentoo.com/di/${name}.tar.gz"; - sha256 = "0803lp8kd3mp1jcm17i019xiqxdy85hhs6xk67zib8gmvg500gcn"; + sha256 = "18z56rprhpm6y0s7pqs19yf7ilq7n50020qzxdm9yra77ivdr09z"; }; makeFlags = [ "INSTALL_DIR=$(out)" ]; diff --git a/pkgs/tools/system/efibootmgr/default.nix b/pkgs/tools/system/efibootmgr/default.nix index 08cdec72c5b9..fbce70e9e8ea 100644 --- a/pkgs/tools/system/efibootmgr/default.nix +++ b/pkgs/tools/system/efibootmgr/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { name = "efibootmgr-${version}"; - version = "15"; + version = "16"; nativeBuildInputs = [ pkgconfig ]; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { owner = "rhboot"; repo = "efibootmgr"; rev = version; - sha256 = "0z7h1dirp8za6lbbf4f3dzn7l1px891rdymhkbqc10yj6gi1jpqp"; + sha256 = "0b27h8vf1b6laln5n0wk2hkzyyh87sxanj7wrz9kimyx03dcq6vi"; }; makeFlags = [ "EFIDIR=nixos" ]; diff --git a/pkgs/tools/system/facter/default.nix b/pkgs/tools/system/facter/default.nix index 42d34c9a8230..22c25bfd567a 100644 --- a/pkgs/tools/system/facter/default.nix +++ b/pkgs/tools/system/facter/default.nix @@ -2,10 +2,10 @@ stdenv.mkDerivation rec { name = "facter-${version}"; - version = "3.11.0"; + version = "3.11.1"; src = fetchFromGitHub { - sha256 = "15cqn09ng23k6a70xvxbpjjqlxw46838k7qr9216lcvxwl2banih"; + sha256 = "10ai59vyx1ssb3jyfwnmi4y5kchlnbi7vn7wbax36pa90l1j7jqk"; rev = version; repo = "facter"; owner = "puppetlabs"; diff --git a/pkgs/tools/system/fio/default.nix b/pkgs/tools/system/fio/default.nix index 9e2bd1a2e2c4..6e63f467f600 100644 --- a/pkgs/tools/system/fio/default.nix +++ b/pkgs/tools/system/fio/default.nix @@ -1,8 +1,8 @@ { stdenv, fetchFromGitHub, libaio, python, zlib }: let - version = "3.5"; - sha256 = "1h6qwvn0h3xz98420a19v8isfjkfnac9vvx8hsw8q4ycb35r8n3h"; + version = "3.6"; + sha256 = "1dilsn6r958skq1kpknm13fdzw7whb3bqa3wwnn2j9gba28599pq"; in stdenv.mkDerivation rec { @@ -15,11 +15,15 @@ stdenv.mkDerivation rec { inherit sha256; }; - buildInputs = [ libaio python zlib ]; + buildInputs = [ python zlib ] + ++ stdenv.lib.optional (!stdenv.isDarwin) libaio; enableParallelBuilding = true; postPatch = '' + substituteInPlace Makefile \ + --replace "mandir = /usr/share/man" "mandir = \$(prefix)/man" \ + --replace "sharedir = /usr/share/fio" "sharedir = \$(prefix)/share/fio" substituteInPlace tools/plot/fio2gnuplot --replace /usr/share/fio $out/share/fio ''; diff --git a/pkgs/tools/system/monit/default.nix b/pkgs/tools/system/monit/default.nix index 9057e5bc9c50..a5d6f2f518c8 100644 --- a/pkgs/tools/system/monit/default.nix +++ b/pkgs/tools/system/monit/default.nix @@ -1,5 +1,7 @@ -{stdenv, fetchurl, openssl, bison, flex, pam, zlib, usePAM ? stdenv.isLinux }: - +{stdenv, fetchurl, openssl, bison, flex, pam, zlib, usePAM ? stdenv.isLinux + , buildPlatform, hostPlatform }: +let useSSL = (openssl != null); + isCross = ( buildPlatform != hostPlatform ) ; in stdenv.mkDerivation rec { name = "monit-5.25.1"; @@ -9,12 +11,19 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ bison flex ]; - buildInputs = [ openssl zlib.dev ] ++ stdenv.lib.optionals usePAM [ pam ]; + buildInputs = [ zlib.dev ] ++ + stdenv.lib.optionals useSSL [ openssl ] ++ + stdenv.lib.optionals usePAM [ pam ]; - configureFlags = [ - "--with-ssl-incl-dir=${openssl.dev}/include" - "--with-ssl-lib-dir=${openssl.out}/lib" - ] ++ stdenv.lib.optionals (! usePAM) [ "--without-pam" ]; + configureFlags = + if useSSL then [ + "--with-ssl-incl-dir=${openssl.dev}/include" + "--with-ssl-lib-dir=${openssl.out}/lib" + ] else [ "--without-ssl" ] ++ + stdenv.lib.optionals (! usePAM) [ "--without-pam" ] ++ + # will need to check both these are true for musl + stdenv.lib.optionals isCross [ "libmonit_cv_setjmp_available=yes" + "libmonit_cv_vsnprintf_c99_conformant=yes"]; meta = { homepage = http://mmonit.com/monit/; diff --git a/pkgs/tools/system/osquery/default.nix b/pkgs/tools/system/osquery/default.nix index c06ba8e541b7..2a719efd79b3 100644 --- a/pkgs/tools/system/osquery/default.nix +++ b/pkgs/tools/system/osquery/default.nix @@ -1,59 +1,62 @@ { stdenv, lib, fetchFromGitHub, pkgconfig, cmake, pythonPackages , udev, audit, aws-sdk-cpp, cryptsetup, lvm2, libgcrypt, libarchive -, libgpgerror, libuuid, iptables, apt, dpkg, lzma, lz4, bzip2, rpm +, libgpgerror, libuuid, iptables, dpkg, lzma, bzip2, rpm , beecrypt, augeas, libxml2, sleuthkit, yara, lldpd, google-gflags -, thrift, boost, rocksdb_lite, cpp-netlib, glog, gbenchmark, snappy -, openssl, linenoise-ng, file, doxygen, devicemapper -, gtest, sqlite +, thrift, boost, rocksdb_lite, glog, gbenchmark, snappy +, openssl, file, doxygen +, gtest, sqlite, fpm, zstd, rdkafka, rapidjson, path }: let + thirdparty = fetchFromGitHub { owner = "osquery"; repo = "third-party"; - rev = "6919841175b2c9cb2dee8986e0cfe49191ecb868"; - sha256 = "1kjxrky586jd1b2z1vs9cm7x1dxw51cizpys9kddiarapc2ih65j"; + rev = "4ef099c31a1165c5e7e3a699f9e4b3eb68c3c3d9"; + sha256 = "1vm0prw4dix0m51vkw9z0vwfd8698gqjw499q8h604hs1rvn6132"; }; in stdenv.mkDerivation rec { name = "osquery-${version}"; - version = "2.5.2"; + version = "3.2.2"; # this is what `osquery --help` will show as the version. OSQUERY_BUILD_VERSION = version; + OSQUERY_PLATFORM = "nixos;${builtins.readFile "${toString path}/.version"}"; src = fetchFromGitHub { owner = "facebook"; repo = "osquery"; rev = version; - sha256 = "16isplk66qpvhrf041l0lxb4z6k7wwd1sg7kpsw2q6kivkxpnk3z"; + sha256 = "0qwj4cy6m25sqwb0irqfqinipx50l4imnz1gqxx147vzfwb52jlq"; }; - patches = [ ./misc.patch ] ++ lib.optional stdenv.isLinux ./platform-nixos.patch; + patches = [ ./misc.patch ]; nativeBuildInputs = [ - pkgconfig cmake pythonPackages.python pythonPackages.jinja2 + pkgconfig cmake pythonPackages.python pythonPackages.jinja2 doxygen fpm ]; - buildInputs = [ + buildInputs = let + gflags' = google-gflags.overrideAttrs (old: { + cmakeFlags = stdenv.lib.filter (f: isNull (builtins.match ".*STATIC.*" f)) old.cmakeFlags; + }); + in [ udev audit (aws-sdk-cpp.override { - apis = [ "firehose" "kinesis" "sts" ]; + apis = [ "firehose" "kinesis" "sts" "ec2" ]; customMemoryManagement = false; }) - lvm2 libgcrypt libarchive libgpgerror libuuid iptables.dev apt dpkg - lzma lz4 bzip2 rpm beecrypt augeas libxml2 sleuthkit - yara lldpd google-gflags thrift boost - cpp-netlib glog gbenchmark snappy openssl linenoise-ng - file doxygen devicemapper cryptsetup - gtest sqlite - - # need to be consistent about the malloc implementation - (rocksdb_lite.override { jemalloc = null; gperftools = null; }) + lvm2 libgcrypt libarchive libgpgerror libuuid iptables dpkg + lzma bzip2 rpm beecrypt augeas libxml2 sleuthkit + yara lldpd gflags' thrift boost + glog gbenchmark snappy openssl + file cryptsetup + gtest sqlite zstd rdkafka rapidjson rocksdb_lite ]; preConfigure = '' @@ -74,6 +77,6 @@ stdenv.mkDerivation rec { homepage = https://osquery.io/; license = licenses.bsd3; platforms = platforms.linux; - maintainers = with maintainers; [ cstrahan ]; + maintainers = with maintainers; [ cstrahan ma27 ]; }; } diff --git a/pkgs/tools/system/osquery/misc.patch b/pkgs/tools/system/osquery/misc.patch index 1a0ef267f0df..acdbf6346c83 100644 --- a/pkgs/tools/system/osquery/misc.patch +++ b/pkgs/tools/system/osquery/misc.patch @@ -1,33 +1,9 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt -index a976a46d..408ac308 100644 +index b8eb5a16..319d81dc 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt -@@ -125,14 +125,13 @@ else() - set(CXX_COMPILE_FLAGS "${CXX_COMPILE_FLAGS} -std=c++14 -stdlib=libc++") - else() - set(LINUX TRUE) -- set(CXX_COMPILE_FLAGS "${CXX_COMPILE_FLAGS} -std=c++14 -stdlib=libstdc++") -+ set(CXX_COMPILE_FLAGS "${CXX_COMPILE_FLAGS} -std=c++14") - endif() - set(POSIX TRUE) - endif() - - if(POSIX) - add_compile_options( -- -Qunused-arguments - -Wstrict-aliasing - -Wno-missing-field-initializers - -Wno-unused-local-typedef -@@ -154,7 +153,6 @@ if(POSIX) - ) - if(NOT FREEBSD) - add_compile_options( -- -Werror=shadow - -fvisibility=hidden - -fvisibility-inlines-hidden - ) -@@ -372,12 +370,6 @@ elseif(NOT FREEBSD) - endif() +@@ -447,12 +447,6 @@ elseif(CLANG AND DEPS AND NOT FREEBSD) + set(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} -flto=thin") endif() -if(NOT IS_DIRECTORY "${CMAKE_SOURCE_DIR}/third-party/sqlite3") @@ -39,7 +15,7 @@ index a976a46d..408ac308 100644 # Make sure deps were built before compiling (else show warning). execute_process( COMMAND "${CMAKE_SOURCE_DIR}/tools/provision.sh" check "${CMAKE_BINARY_DIR}" -@@ -439,6 +431,8 @@ endif() +@@ -518,6 +512,8 @@ endif() if(APPLE) LOG_PLATFORM("OS X") @@ -48,87 +24,67 @@ index a976a46d..408ac308 100644 elseif(OSQUERY_BUILD_PLATFORM STREQUAL "debian") LOG_PLATFORM("Debian") elseif(OSQUERY_BUILD_PLATFORM STREQUAL "ubuntu") -@@ -477,7 +471,6 @@ if(POSIX) - include_directories("${BUILD_DEPS}/include/openssl") +@@ -567,7 +563,6 @@ if(POSIX AND DEPS) + endif() endif() -include_directories("${CMAKE_SOURCE_DIR}/third-party/sqlite3") include_directories("${CMAKE_SOURCE_DIR}/include") include_directories("${CMAKE_SOURCE_DIR}") -@@ -559,21 +552,10 @@ else() - set(GTEST_FLAGS "-DGTEST_USE_OWN_TR1_TUPLE=0") +@@ -655,18 +650,6 @@ if(FREEBSD OR "${HAVE_TR1_TUPLE}" STREQUAL "") + add_definitions(-DGTEST_USE_OWN_TR1_TUPLE=0) endif() -set(GTEST_FLAGS -- ${GTEST_FLAGS} - "-I${CMAKE_SOURCE_DIR}/third-party/googletest/googletest/include" - "-I${CMAKE_SOURCE_DIR}/third-party/googletest/googlemock/include" -) -join("${GTEST_FLAGS}" " " GTEST_FLAGS) - - set(BUILD_GTEST TRUE) - --add_subdirectory("${CMAKE_SOURCE_DIR}/third-party/googletest") +-if(NOT SKIP_TESTS) +- add_subdirectory("${CMAKE_SOURCE_DIR}/third-party/googletest") +-endif() - - include(Thrift) - -add_subdirectory("${CMAKE_SOURCE_DIR}/third-party/sqlite3") - - add_subdirectory(osquery) - add_subdirectory(tools/tests) - -diff --git a/include/osquery/core.h b/include/osquery/core.h -index b597edee..b0628037 100644 ---- a/include/osquery/core.h -+++ b/include/osquery/core.h -@@ -15,8 +15,9 @@ - #include <string> - #include <vector> - --#if defined(__APPLE__) || defined(__FreeBSD__) -+#if defined(__APPLE__) || defined(__FreeBSD__) || defined(__linux__) - #include <boost/thread/shared_mutex.hpp> -+#include <boost/thread/recursive_mutex.hpp> - #else - #include <shared_mutex> - #endif -@@ -188,7 +189,7 @@ inline bool isPlatform(PlatformType a, const PlatformType& t = kPlatformType) { - return (static_cast<int>(t) & static_cast<int>(a)) != 0; - } - --#if defined(__APPLE__) || defined(__FreeBSD__) -+#if defined(__APPLE__) || defined(__FreeBSD__) || defined(__linux__) - #define MUTEX_IMPL boost - #else - #define MUTEX_IMPL std -@@ -204,10 +205,10 @@ using WriteLock = MUTEX_IMPL::unique_lock<Mutex>; - using ReadLock = MUTEX_IMPL::shared_lock<Mutex>; - - /// Helper alias for defining recursive mutexes. --using RecursiveMutex = std::recursive_mutex; -+using RecursiveMutex = MUTEX_IMPL::recursive_mutex; - - /// Helper alias for write locking a recursive mutex. --using RecursiveLock = std::lock_guard<std::recursive_mutex>; -+using RecursiveLock = MUTEX_IMPL::lock_guard<MUTEX_IMPL::recursive_mutex>; - } - - /** + if(NOT FREEBSD) + add_subdirectory("${CMAKE_SOURCE_DIR}/third-party/linenoise-ng") + endif() diff --git a/osquery/CMakeLists.txt b/osquery/CMakeLists.txt -index 77913d31..671b20d4 100644 +index 1c8201ee..a89e6821 100644 --- a/osquery/CMakeLists.txt +++ b/osquery/CMakeLists.txt -@@ -57,7 +57,7 @@ endif() +@@ -35,8 +35,6 @@ if(CLANG AND POSIX) + -Wextra + -pedantic + -Wuseless-cast +- -Wno-c99-extensions +- -Wno-zero-length-array + -Wno-unused-parameter + -Wno-gnu-case-range + -Weffc++ +@@ -61,14 +59,7 @@ endif() # Construct a set of all object files, starting with third-party and all # of the osquery core objects (sources from ADD_CORE_LIBRARY macros). --set(OSQUERY_OBJECTS $<TARGET_OBJECTS:osquery_sqlite>) -+set(OSQUERY_OBJECTS "") +-if(FREEBSD) +- set(OSQUERY_OBJECTS $<TARGET_OBJECTS:osquery_sqlite>) +-else() +- set(OSQUERY_OBJECTS +- $<TARGET_OBJECTS:osquery_sqlite> +- $<TARGET_OBJECTS:linenoise-ng> +- ) +-endif() ++set(OSQUERY_OBJECTS $<TARGET_OBJECTS:linenoise-ng>) # Add subdirectories add_subdirectory(config) -@@ -138,6 +138,8 @@ elseif(FREEBSD) +@@ -147,10 +138,11 @@ if(APPLE OR LINUX) + ADD_OSQUERY_LINK_ADDITIONAL("rocksdb_lite") + elseif(FREEBSD) + ADD_OSQUERY_LINK_CORE("icuuc") +- ADD_OSQUERY_LINK_CORE("linenoise") ADD_OSQUERY_LINK_ADDITIONAL("rocksdb-lite") endif() @@ -137,41 +93,62 @@ index 77913d31..671b20d4 100644 if(POSIX) ADD_OSQUERY_LINK_CORE("boost_system") ADD_OSQUERY_LINK_CORE("boost_filesystem") -@@ -157,6 +159,7 @@ ADD_OSQUERY_LINK_ADDITIONAL("cppnetlib-client-connections${WO_KEY}") +@@ -168,6 +160,8 @@ endif() ADD_OSQUERY_LINK_CORE("glog${WO_KEY}") if(POSIX) + ADD_OSQUERY_LINK_ADDITIONAL("benchmark") - ADD_OSQUERY_LINK_ADDITIONAL("snappy") ++ ADD_OSQUERY_LINK_ADDITIONAL("snappy") ADD_OSQUERY_LINK_ADDITIONAL("ssl") ADD_OSQUERY_LINK_ADDITIONAL("crypto") -@@ -336,13 +339,6 @@ if(NOT OSQUERY_BUILD_SDK_ONLY) - - install(DIRECTORY "${CMAKE_SOURCE_DIR}/packs/" - DESTINATION "${CMAKE_INSTALL_PREFIX}/share/osquery/packs" COMPONENT main) -- if(APPLE) -- install(FILES "${CMAKE_SOURCE_DIR}/tools/deployment/com.facebook.osqueryd.plist" -- DESTINATION "${CMAKE_INSTALL_PREFIX}/share/osquery/" COMPONENT main) -- else() -- install(PROGRAMS "${CMAKE_SOURCE_DIR}/tools/deployment/osqueryd.initd" -- DESTINATION "/etc/init.d/" RENAME "osqueryd" COMPONENT main) -- endif() + ADD_OSQUERY_LINK_ADDITIONAL("libpthread") +diff --git a/osquery/extensions/CMakeLists.txt b/osquery/extensions/CMakeLists.txt +index 52f3bf80..066ed1c0 100644 +--- a/osquery/extensions/CMakeLists.txt ++++ b/osquery/extensions/CMakeLists.txt +@@ -60,12 +60,6 @@ else() + ) endif() - if(NOT SKIP_TESTS) -diff --git a/osquery/tables/system/linux/tests/md_tables_tests.cpp b/osquery/tables/system/linux/tests/md_tables_tests.cpp -index 126be362..119d361d 100644 ---- a/osquery/tables/system/linux/tests/md_tables_tests.cpp -+++ b/osquery/tables/system/linux/tests/md_tables_tests.cpp -@@ -72,7 +72,7 @@ void GetDrivesForArrayTestHarness(std::string arrayName, - EXPECT_CALL(md, getArrayInfo(arrayDevPath, _)) - .WillOnce(DoAll(SetArgReferee<1>(arrayInfo), Return(true))); - -- Sequence::Sequence s1; -+ Sequence s1; - for (int i = 0; i < MD_SB_DISKS; i++) { - mdu_disk_info_t diskInfo; - diskInfo.number = i; +-if(NOT WINDOWS) +- add_compile_options( +- -Wno-macro-redefined +- ) +-endif() +- + ADD_OSQUERY_LIBRARY(TRUE osquery_extensions + ${THRIFT_GENERATED_FILES} + ${THRIFT_IMPL_FILE} +diff --git a/osquery/logger/CMakeLists.txt b/osquery/logger/CMakeLists.txt +index ab91bd24..d8364991 100644 +--- a/osquery/logger/CMakeLists.txt ++++ b/osquery/logger/CMakeLists.txt +@@ -55,9 +55,9 @@ if(NOT SKIP_KAFKA AND NOT WINDOWS AND NOT FREEBSD) + + ADD_OSQUERY_LINK_ADDITIONAL("rdkafka") + +- set(OSQUERY_LOGGER_KAFKA_PLUGINS_TESTS +- "logger/plugins/tests/kafka_producer_tests.cpp" +- ) ++ #set(OSQUERY_LOGGER_KAFKA_PLUGINS_TESTS ++ # "logger/plugins/tests/kafka_producer_tests.cpp" ++ #) + + ADD_OSQUERY_TEST_ADDITIONAL(${OSQUERY_LOGGER_KAFKA_PLUGINS_TESTS}) + endif() +diff --git a/osquery/tables/CMakeLists.txt b/osquery/tables/CMakeLists.txt +index dd78084f..158758e1 100644 +--- a/osquery/tables/CMakeLists.txt ++++ b/osquery/tables/CMakeLists.txt +@@ -68,7 +68,7 @@ if(LINUX) + set(TABLE_PLATFORM "linux") + + ADD_OSQUERY_LINK_ADDITIONAL("libresolv.so") +- ADD_OSQUERY_LINK_ADDITIONAL("cryptsetup devmapper lvm2app lvm-internal daemonclient") ++ ADD_OSQUERY_LINK_ADDITIONAL("cryptsetup devmapper lvm2app") + ADD_OSQUERY_LINK_ADDITIONAL("gcrypt gpg-error") + ADD_OSQUERY_LINK_ADDITIONAL("blkid") + ADD_OSQUERY_LINK_ADDITIONAL("ip4tc") diff --git a/specs/windows/services.table b/specs/windows/services.table index 4ac24ee9..657d8b99 100644 --- a/specs/windows/services.table diff --git a/pkgs/tools/system/osquery/platform-nixos.patch b/pkgs/tools/system/osquery/platform-nixos.patch deleted file mode 100644 index 7e1afcb640b3..000000000000 --- a/pkgs/tools/system/osquery/platform-nixos.patch +++ /dev/null @@ -1,22 +0,0 @@ -diff --git a/tools/get_platform.py b/tools/get_platform.py -index 3dd34516..f53ca83a 100644 ---- a/tools/get_platform.py -+++ b/tools/get_platform.py -@@ -26,6 +26,8 @@ DEBIAN_VERSION = "/etc/debian_version" - GENTOO_RELEASE = "/etc/gentoo-release" - - def _platform(): -+ return ("nixos", "nixos") -+ - osType, _, _, _, _, _ = platform.uname() - - if osType == "Windows": -@@ -75,6 +77,8 @@ def _platform(): - return (None, osType.lower()) - - def _distro(osType): -+ return "unknown_version" -+ - def getRedhatDistroVersion(pattern): - with open(SYSTEM_RELEASE, "r") as fd: - contents = fd.read() diff --git a/pkgs/tools/system/storebrowse/default.nix b/pkgs/tools/system/storebrowse/default.nix index 40332f7b0d44..179b4cb1a4c0 100644 --- a/pkgs/tools/system/storebrowse/default.nix +++ b/pkgs/tools/system/storebrowse/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, fetchhg, go, sqlite}: -assert stdenv.isLinux && (stdenv.isi686 || stdenv.isx86_64 || stdenv.isArm); +assert stdenv.isLinux && (stdenv.isi686 || stdenv.isx86_64 || stdenv.isAarch32); stdenv.mkDerivation rec { name = "storebrowse-20130318212204"; diff --git a/pkgs/tools/text/jumanpp/default.nix b/pkgs/tools/text/jumanpp/default.nix new file mode 100644 index 000000000000..c4cb12cb6938 --- /dev/null +++ b/pkgs/tools/text/jumanpp/default.nix @@ -0,0 +1,24 @@ +{ stdenv, fetchurl, cmake, protobuf }: +stdenv.mkDerivation rec { + name = "jumanpp"; + version = "2.0.0-rc2"; + + src = fetchurl { + url = "https://github.com/ku-nlp/${name}/releases/download/v${version}/${name}-${version}.tar.xz"; + sha256 = "17fzmd0f5m9ayfhsr0mg7hjp3pg1mhbgknhgyd8v87x46g8bg6qp"; + }; + buildInputs = [ cmake protobuf ]; + + meta = with stdenv.lib; { + description = "A Japanese morphological analyser using a recurrent neural network language model (RNNLM)"; + longDescription = '' + JUMAN++ is a new morphological analyser that considers semantic + plausibility of word sequences by using a recurrent neural network + language model (RNNLM). + ''; + homepage = http://nlp.ist.i.kyoto-u.ac.jp/index.php?JUMAN++; + license = licenses.asl20; + maintainers = with maintainers; [ mt-caret ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/tools/typesetting/asciidoctor/default.nix b/pkgs/tools/typesetting/asciidoctor/default.nix index f8cfe44cbd73..b1fe301775c8 100644 --- a/pkgs/tools/typesetting/asciidoctor/default.nix +++ b/pkgs/tools/typesetting/asciidoctor/default.nix @@ -15,7 +15,6 @@ bundlerApp { "asciidoctor-latex" "asciidoctor-pdf" "asciidoctor-safe" - "asciidoctor-mathematical" ]; gemConfig = { diff --git a/pkgs/tools/typesetting/pdf2djvu/default.nix b/pkgs/tools/typesetting/pdf2djvu/default.nix index 9a7dac0a0ca1..23ec4521729b 100644 --- a/pkgs/tools/typesetting/pdf2djvu/default.nix +++ b/pkgs/tools/typesetting/pdf2djvu/default.nix @@ -1,12 +1,12 @@ { stdenv, fetchurl, pkgconfig, djvulibre, poppler, fontconfig, libjpeg }: stdenv.mkDerivation rec { - version = "0.9.8"; + version = "0.9.9"; name = "pdf2djvu-${version}"; src = fetchurl { url = "https://github.com/jwilk/pdf2djvu/releases/download/${version}/${name}.tar.xz"; - sha256 = "0kc3n4lm9dd13w66ng7l637ha241q89xrv9da0wzsdg6v0gp6ifg"; + sha256 = "0v1his9ph04dllzyxkirc8kd23l41qc41bwg9bfsbzkri16b7xik"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/tools/virtualization/google-compute-engine/default.nix b/pkgs/tools/virtualization/google-compute-engine/default.nix index a923d73c03e4..3645de88bf8a 100644 --- a/pkgs/tools/virtualization/google-compute-engine/default.nix +++ b/pkgs/tools/virtualization/google-compute-engine/default.nix @@ -11,14 +11,14 @@ buildPythonApplication rec { name = "google-compute-engine-${version}"; - version = "20170914"; + version = "20180129"; namePrefix = ""; src = fetchFromGitHub { owner = "GoogleCloudPlatform"; repo = "compute-image-packages"; rev = version; - sha256 = "0hlzcrf6yhzan25f4wzy1vbncak9whhqzrzza026ly3sq0smmjpg"; + sha256 = "0380fnr64109hv8l1f3sgdg8a5mf020axj7jh8y25xq6wzkjm20c"; }; postPatch = '' @@ -52,5 +52,6 @@ buildPythonApplication rec { homepage = "https://github.com/GoogleCloudPlatform/compute-image-packages"; license = licenses.asl20; maintainers = with maintainers; [ zimbatm ]; + platforms = platforms.linux; }; } diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index 4fec9d928c1f..4b4dd2bf915d 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -24,10 +24,6 @@ in ### Deprecated aliases - for backward compatibility mapAliases (rec { - _2048-in-terminal = "2048-in-terminal"; # added 2017-01-16 - _2bwm = "2bwm"; # added 2017-01-16 - _389-ds-base = "389-ds-base"; # added 2017-01-16 - _90secondportraits = "90secondsportraits"; # added 2017-01-16 accounts-qt = libsForQt5.accounts-qt; # added 2015-12-19 adobeReader = adobe-reader; # added 2013-11-04 aircrackng = aircrack-ng; # added 2016-01-14 @@ -134,7 +130,6 @@ mapAliases (rec { man_db = man-db; # added 2016-05 piwik = matomo; # added 2018-01-16 midoriWrapper = midori; # added 2015-01 - minc_tools = minc-tools; # 2017-12 mlt-qt5 = libsForQt5.mlt; # added 2015-12-19 mobile_broadband_provider_info = mobile-broadband-provider-info; # added 2018-02-25 module_init_tools = kmod; # added 2016-04-22 @@ -228,6 +223,7 @@ mapAliases (rec { vimprobable2Wrapper = vimprobable2; # added 2015-01 virtviewer = virt-viewer; # added 2015-12-24 vorbisTools = vorbis-tools; # added 2016-01-26 + wineStaging = wine-staging; # added 2018-01-08 winusb = woeusb; # added 2017-12-22 x11 = xlibsWrapper; # added 2015-09 xf86_video_nouveau = xorg.xf86videonouveau; # added 2015-09 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index eded21134dda..c1606e82ca89 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -288,7 +288,7 @@ with pkgs; ... # For hash agility }@args: fetchzip ({ inherit name; - url = "https://gitlab.com/${owner}/${repo}/repository/archive.tar.gz?ref=${rev}"; + url = "https://gitlab.com/${owner}/${repo}/-/archive/${rev}/${repo}-${rev}.tar.gz"; meta.homepage = "https://gitlab.com/${owner}/${repo}/"; } // removeAttrs args [ "owner" "repo" "rev" ]) // { inherit rev; }; @@ -519,6 +519,8 @@ with pkgs; apitrace = libsForQt5.callPackage ../applications/graphics/apitrace {}; + arguments = callPackage ../development/libraries/arguments { }; + argus = callPackage ../tools/networking/argus {}; argus-clients = callPackage ../tools/networking/argus-clients {}; @@ -563,6 +565,8 @@ with pkgs; aws-vault = callPackage ../tools/admin/aws-vault { }; + iamy = callPackage ../tools/admin/iamy { }; + azure-cli = nodePackages.azure-cli; azure-vhd-utils = callPackage ../tools/misc/azure-vhd-utils { }; @@ -1120,7 +1124,9 @@ with pkgs; doitlive = callPackage ../tools/misc/doitlive { }; - dosage = pythonPackages.dosage; + dosage = callPackage ../applications/graphics/dosage { + pythonPackages = python3Packages; + }; dpic = callPackage ../tools/graphics/dpic { }; @@ -1138,6 +1144,8 @@ with pkgs; earlyoom = callPackage ../os-specific/linux/earlyoom { }; + EBTKS = callPackage ../development/libraries/science/biology/EBTKS { }; + ecasound = callPackage ../applications/audio/ecasound { }; edac-utils = callPackage ../os-specific/linux/edac-utils { }; @@ -1354,6 +1362,8 @@ with pkgs; bash-supergenpass = callPackage ../tools/security/bash-supergenpass { }; + sweep-visualizer = callPackage ../tools/misc/sweep-visualizer { }; + syscall_limiter = callPackage ../os-specific/linux/syscall_limiter {}; syslogng = callPackage ../tools/system/syslog-ng { }; @@ -1418,7 +1428,7 @@ with pkgs; utillinux = utillinuxMinimal; }; - antigen = callPackage ../shells/antigen { }; + antigen = callPackage ../shells/zsh/antigen { }; apparix = callPackage ../tools/misc/apparix { }; @@ -1631,15 +1641,15 @@ with pkgs; connman = callPackage ../tools/networking/connman { }; - connman-gtk = callPackage ../tools/networking/connman-gtk { }; + connman-gtk = callPackage ../tools/networking/connman/connman-gtk { }; - connman-ncurses = callPackage ../tools/networking/connman-ncurses { }; + connman-ncurses = callPackage ../tools/networking/connman/connman-ncurses { }; - connman-notify = callPackage ../tools/networking/connman-notify { }; + connman-notify = callPackage ../tools/networking/connman/connman-notify { }; - connmanui = callPackage ../tools/networking/connmanui { }; + connmanui = callPackage ../tools/networking/connman/connmanui { }; - connman_dmenu = callPackage ../tools/networking/connman_dmenu { }; + connman_dmenu = callPackage ../tools/networking/connman/connman_dmenu { }; convertlit = callPackage ../tools/text/convertlit { }; @@ -1769,6 +1779,8 @@ with pkgs; cloud-utils = callPackage ../tools/misc/cloud-utils { }; + cocoapods = callPackage ../development/mobile/cocoapods { }; + compass = callPackage ../development/tools/compass { }; conda = callPackage ../tools/package-management/conda { }; @@ -1882,7 +1894,7 @@ with pkgs; debootstrap = callPackage ../tools/misc/debootstrap { }; - deer = callPackage ../shells/zsh-deer { }; + deer = callPackage ../shells/zsh/zsh-deer { }; detox = callPackage ../tools/misc/detox { }; @@ -2077,6 +2089,8 @@ with pkgs; edk2 = callPackage ../development/compilers/edk2 { }; + eff = callPackage ../development/interpreters/eff { }; + eflite = callPackage ../applications/audio/eflite {}; eid-mw = callPackage ../tools/security/eid-mw { }; @@ -2101,7 +2115,7 @@ with pkgs; emscripten = callPackage ../development/compilers/emscripten { }; - emscriptenfastcompPackages = callPackage ../development/compilers/emscripten-fastcomp { }; + emscriptenfastcompPackages = callPackage ../development/compilers/emscripten/fastcomp { }; emscriptenfastcomp = emscriptenfastcompPackages.emscriptenfastcomp; @@ -2116,8 +2130,8 @@ with pkgs; evemu = callPackage ../tools/system/evemu { }; # The latest version used by elasticsearch, logstash, kibana and the the beats from elastic. - elk5Version = "5.6.6"; - elk6Version = "6.1.2"; + elk5Version = "5.6.9"; + elk6Version = "6.2.4"; elasticsearch = callPackage ../servers/search/elasticsearch { }; elasticsearch2 = callPackage ../servers/search/elasticsearch/2.x.nix { }; @@ -2389,10 +2403,14 @@ with pkgs; fsfs = callPackage ../tools/filesystems/fsfs { }; + fstl = qt5.callPackage ../applications/graphics/fstl { }; + fswebcam = callPackage ../os-specific/linux/fswebcam { }; fuseiso = callPackage ../tools/filesystems/fuseiso { }; + foundationdb = callPackage ../servers/foundationdb { stdenv = overrideCC stdenv gcc49; }; + fuse-7z-ng = callPackage ../tools/filesystems/fuse-7z-ng { }; fwknop = callPackage ../tools/security/fwknop { }; @@ -2882,8 +2900,6 @@ with pkgs; hiera-eyaml = callPackage ../tools/system/hiera-eyaml { }; - hfsprogs = callPackage ../tools/filesystems/hfsprogs { }; - highlight = callPackage ../tools/text/highlight ({ lua = lua5; } // lib.optionalAttrs stdenv.isDarwin { @@ -3098,10 +3114,14 @@ with pkgs; jmespath = callPackage ../development/tools/jmespath { }; + jmol = callPackage ../applications/science/chemistry/jmol { }; + jmtpfs = callPackage ../tools/filesystems/jmtpfs { }; jnettop = callPackage ../tools/networking/jnettop { }; + go-jira = callPackage ../applications/misc/go-jira { }; + john = callPackage ../tools/security/john { gcc = gcc49; # doesn't build with gcc5 }; @@ -3160,7 +3180,7 @@ with pkgs; kbfs = callPackage ../tools/security/kbfs { }; - keybase-gui = callPackage ../tools/security/keybase-gui { }; + keybase-gui = callPackage ../tools/security/keybase/gui.nix { }; keychain = callPackage ../tools/misc/keychain { }; @@ -3279,6 +3299,8 @@ with pkgs; memtester = callPackage ../tools/system/memtester { }; + minergate = callPackage ../applications/misc/minergate { }; + minidlna = callPackage ../tools/networking/minidlna { }; minisign = callPackage ../tools/security/minisign { }; @@ -3301,7 +3323,7 @@ with pkgs; mxt-app = callPackage ../misc/mxt-app { }; - nagstamon = callPackage ../tools/nagstamon { + nagstamon = callPackage ../tools/misc/nagstamon { pythonPackages = python3Packages; }; @@ -3391,6 +3413,8 @@ with pkgs; ispell = callPackage ../tools/text/ispell {}; + jumanpp = callPackage ../tools/text/jumanpp {}; + kindlegen = callPackage ../tools/typesetting/kindlegen { }; latex2html = callPackage ../tools/misc/latex2html { }; @@ -3491,6 +3515,8 @@ with pkgs; limesurvey = callPackage ../servers/limesurvey { }; + linuxquota = callPackage ../tools/misc/linuxquota { }; + localtime = callPackage ../tools/system/localtime { }; logcheck = callPackage ../tools/system/logcheck { @@ -3880,9 +3906,9 @@ with pkgs; networkmanager_strongswan = callPackage ../tools/networking/network-manager/strongswan.nix { }; - networkmanagerapplet = newScope gnome2 ../tools/networking/network-manager-applet { }; + networkmanagerapplet = newScope gnome2 ../tools/networking/network-manager/applet.nix { }; - networkmanager_dmenu = callPackage ../tools/networking/networkmanager_dmenu { }; + networkmanager_dmenu = callPackage ../tools/networking/network-manager/dmenu.nix { }; newsboat = callPackage ../applications/networking/feedreaders/newsboat { }; @@ -4020,7 +4046,7 @@ with pkgs; offlineimap = callPackage ../tools/networking/offlineimap { }; - oh-my-zsh = callPackage ../shells/oh-my-zsh { }; + oh-my-zsh = callPackage ../shells/zsh/oh-my-zsh { }; ola = callPackage ../applications/misc/ola { }; @@ -4312,7 +4338,7 @@ with pkgs; qt = qt5.qtbase; }; - pinentry_mac = callPackage ../tools/security/pinentry-mac { + pinentry_mac = callPackage ../tools/security/pinentry/mac.nix { inherit (darwin.apple_sdk.frameworks) Cocoa; }; @@ -4512,7 +4538,7 @@ with pkgs; quilt = callPackage ../development/tools/quilt { }; - quota = callPackage ../tools/misc/quota { }; + quota = if stdenv.isLinux then linuxquota else unixtools.quota; wiggle = callPackage ../development/tools/wiggle { }; @@ -4534,6 +4560,8 @@ with pkgs; rarcrack = callPackage ../tools/security/rarcrack { }; + rarian = callPackage ../development/libraries/rarian { }; + ratools = callPackage ../tools/networking/ratools { }; rawdog = callPackage ../applications/networking/feedreaders/rawdog { }; @@ -4542,6 +4570,8 @@ with pkgs; rdma-core = callPackage ../os-specific/linux/rdma-core { }; + react-native-debugger = callPackage ../development/tools/react-native-debugger { }; + read-edid = callPackage ../os-specific/linux/read-edid { }; redir = callPackage ../tools/networking/redir { }; @@ -4691,6 +4721,8 @@ with pkgs; runzip = callPackage ../tools/archivers/runzip { }; + rw = callPackage ../tools/misc/rw { }; + rxp = callPackage ../tools/text/xml/rxp { }; rzip = callPackage ../tools/compression/rzip { }; @@ -4729,6 +4761,8 @@ with pkgs; sasview = callPackage ../applications/science/misc/sasview {}; + scallion = callPackage ../tools/security/scallion { }; + scanbd = callPackage ../tools/graphics/scanbd { }; screen = callPackage ../tools/misc/screen { @@ -4843,6 +4877,8 @@ with pkgs; sleuthkit = callPackage ../tools/system/sleuthkit {}; + sleepyhead = callPackage ../applications/misc/sleepyhead {}; + slimrat = callPackage ../tools/networking/slimrat { inherit (perlPackages) WWWMechanize LWP; }; @@ -5149,6 +5185,8 @@ with pkgs; tmuxinator = callPackage ../tools/misc/tmuxinator { }; + tmuxPlugins = recurseIntoAttrs (callPackage ../misc/tmux-plugins { }); + tmsu = callPackage ../tools/filesystems/tmsu { }; toilet = callPackage ../tools/misc/toilet { }; @@ -5778,17 +5816,17 @@ with pkgs; zsh-autoenv = callPackage ../tools/misc/zsh-autoenv { }; - zsh-git-prompt = callPackage ../shells/zsh-git-prompt { }; + zsh-git-prompt = callPackage ../shells/zsh/zsh-git-prompt { }; zsh-navigation-tools = callPackage ../tools/misc/zsh-navigation-tools { }; - zsh-syntax-highlighting = callPackage ../shells/zsh-syntax-highlighting { }; + zsh-syntax-highlighting = callPackage ../shells/zsh/zsh-syntax-highlighting { }; - zsh-autosuggestions = callPackage ../shells/zsh-autosuggestions { }; + zsh-autosuggestions = callPackage ../shells/zsh/zsh-autosuggestions { }; - zsh-powerlevel9k = callPackage ../shells/zsh-powerlevel9k { }; + zsh-powerlevel9k = callPackage ../shells/zsh/zsh-powerlevel9k { }; - zsh-command-time = callPackage ../shells/zsh-command-time { }; + zsh-command-time = callPackage ../shells/zsh/zsh-command-time { }; zssh = callPackage ../tools/networking/zssh { }; @@ -5815,17 +5853,19 @@ with pkgs; interactive = true; }); - bash-completion = callPackage ../shells/bash-completion { }; + bash-completion = callPackage ../shells/bash/bash-completion { }; - nix-bash-completions = callPackage ../shells/nix-bash-completions { }; + nix-bash-completions = callPackage ../shells/bash/nix-bash-completions { }; dash = callPackage ../shells/dash { }; + dashing = callPackage ../tools/misc/dashing { }; + es = callPackage ../shells/es { }; fish = callPackage ../shells/fish { }; - fish-foreign-env = callPackage ../shells/fish-foreign-env { }; + fish-foreign-env = callPackage ../shells/fish/fish-foreign-env { }; ion = callPackage ../shells/ion { }; @@ -5847,13 +5887,13 @@ with pkgs; zsh = callPackage ../shells/zsh { }; - nix-zsh-completions = callPackage ../shells/nix-zsh-completions { }; + nix-zsh-completions = callPackage ../shells/zsh/nix-zsh-completions { }; - zsh-completions = callPackage ../shells/zsh-completions { }; + zsh-completions = callPackage ../shells/zsh/zsh-completions { }; - zsh-prezto = callPackage ../shells/zsh-prezto { }; + zsh-prezto = callPackage ../shells/zsh/zsh-prezto { }; - grml-zsh-config = callPackage ../shells/grml-zsh-config { }; + grml-zsh-config = callPackage ../shells/zsh/grml-zsh-config { }; ### DEVELOPMENT / COMPILERS @@ -5914,8 +5954,13 @@ with pkgs; clang-sierraHack = clang.override { name = "clang-wrapper-with-reexport-hack"; - bintools = clang.bintools.override { + bintools = darwin.binutils.override { useMacosReexportHack = true; + bintools = darwin.binutils.bintools.override { + cctools = darwin.cctools.override { + enableDumpNormalizedLibArgs = true; + }; + }; }; }; @@ -5986,6 +6031,8 @@ with pkgs; ecl = callPackage ../development/compilers/ecl { }; ecl_16_1_2 = callPackage ../development/compilers/ecl/16.1.2.nix { }; + eli = callPackage ../development/compilers/eli { }; + eql = callPackage ../development/compilers/eql {}; elmPackages = recurseIntoAttrs (callPackage ../development/compilers/elm { }); @@ -6409,7 +6456,7 @@ with pkgs; openjdk8 = if stdenv.isDarwin then - callPackage ../development/compilers/openjdk-darwin/8.nix { } + callPackage ../development/compilers/openjdk/darwin/8.nix { } else callPackage ../development/compilers/openjdk/8.nix { bootjdk = callPackage ../development/compilers/openjdk/bootstrap.nix { version = "8"; }; @@ -6424,12 +6471,12 @@ with pkgs; openjdk = openjdk8; - jdk8 = if stdenv.isArm || stdenv.isAarch64 then oraclejdk8 else openjdk8 // { outputs = [ "out" ]; }; - jre8 = if stdenv.isArm || stdenv.isAarch64 then oraclejre8 else lib.setName "openjre-${lib.getVersion pkgs.openjdk8.jre}" + jdk8 = if stdenv.isAarch32 || stdenv.isAarch64 then oraclejdk8 else openjdk8 // { outputs = [ "out" ]; }; + jre8 = if stdenv.isAarch32 || stdenv.isAarch64 then oraclejre8 else lib.setName "openjre-${lib.getVersion pkgs.openjdk8.jre}" (lib.addMetaAttrs { outputsToInstall = [ "jre" ]; } (openjdk8.jre // { outputs = [ "jre" ]; })); jre8_headless = - if stdenv.isArm || stdenv.isAarch64 then + if stdenv.isAarch32 || stdenv.isAarch64 then oraclejre8 else if stdenv.isDarwin then jre8 @@ -6438,12 +6485,12 @@ with pkgs; (lib.addMetaAttrs { outputsToInstall = [ "jre" ]; } ((openjdk8.override { minimal = true; }).jre // { outputs = [ "jre" ]; })); - jdk10 = if stdenv.isArm || stdenv.isAarch64 then oraclejdk10 else openjdk10 // { outputs = [ "out" ]; }; - jre10 = if stdenv.isArm || stdenv.isAarch64 then oraclejre10 else lib.setName "openjre-${lib.getVersion pkgs.openjdk10.jre}" + jdk10 = if stdenv.isAarch32 || stdenv.isAarch64 then oraclejdk10 else openjdk10 // { outputs = [ "out" ]; }; + jre10 = if stdenv.isAarch32 || stdenv.isAarch64 then oraclejre10 else lib.setName "openjre-${lib.getVersion pkgs.openjdk10.jre}" (lib.addMetaAttrs { outputsToInstall = [ "jre" ]; } (openjdk10.jre // { outputs = [ "jre" ]; })); jre10_headless = - if stdenv.isArm || stdenv.isAarch64 then + if stdenv.isAarch32 || stdenv.isAarch64 then oraclejre10 else if stdenv.isDarwin then jre10 @@ -6895,15 +6942,14 @@ with pkgs; libc = if targetPlatform != hostPlatform then libcCross else stdenv.cc.libc; }; - wrapBintoolsWith = { bintools, libc }: bintoolsWrapperFun { + wrapBintoolsWith = { bintools, libc, extraBuildCommands ? "" }: bintoolsWrapperFun { nativeTools = targetPlatform == hostPlatform && stdenv.cc.nativeTools or false; nativeLibc = targetPlatform == hostPlatform && stdenv.cc.nativeLibc or false; nativePrefix = stdenv.cc.nativePrefix or ""; noLibc = (libc == null); - inherit bintools libc; - extraBuildCommands = ""; + inherit bintools libc extraBuildCommands; }; # prolog @@ -7357,7 +7403,7 @@ with pkgs; avr8burnomat = callPackage ../development/misc/avr8-burn-omat { }; - betaflight = callPackage ../development/stm32/betaflight { }; + betaflight = callPackage ../development/misc/stm32/betaflight { }; sourceFromHead = callPackage ../build-support/source-from-head-fun.nix {}; @@ -7425,6 +7471,7 @@ with pkgs; ansible_2_2 = callPackage ../tools/admin/ansible/2.2.nix {}; ansible_2_3 = callPackage ../tools/admin/ansible/2.3.nix {}; ansible_2_4 = callPackage ../tools/admin/ansible/2.4.nix {}; + ansible_2_5 = callPackage ../tools/admin/ansible/2.5.nix {}; ansible = ansible_2_4; ansible2 = ansible_2_4; @@ -7547,7 +7594,9 @@ with pkgs; buildbot-ui = buildbot.withPlugins (with self.buildbot-plugins; [ www ]); buildbot-full = buildbot.withPlugins (with self.buildbot-plugins; [ www console-view waterfall-view grid-view wsgi-dashboards ]); - buildkite-agent = callPackage ../development/tools/continuous-integration/buildkite-agent { }; + buildkite-agent = buildkite-agent2; + buildkite-agent2 = callPackage ../development/tools/continuous-integration/buildkite-agent/2.x.nix { }; + buildkite-agent3 = callPackage ../development/tools/continuous-integration/buildkite-agent/3.x.nix { }; byacc = callPackage ../development/tools/parsing/byacc { }; @@ -7607,9 +7656,7 @@ with pkgs; cl-launch = callPackage ../development/tools/misc/cl-launch {}; - cloudfoundry-cli = callPackage ../development/tools/cloudfoundry-cli { - go = go_1_9; - }; + cloudfoundry-cli = callPackage ../development/tools/cloudfoundry-cli { }; coan = callPackage ../development/tools/analysis/coan { }; @@ -7795,7 +7842,7 @@ with pkgs; funnelweb = callPackage ../development/tools/literate-programming/funnelweb { }; - gede = callPackage ../development/tools/misc/gede { }; + gede = libsForQt5.callPackage ../development/tools/misc/gede { }; gdbgui = callPackage ../development/tools/misc/gdbgui { }; @@ -8091,7 +8138,7 @@ with pkgs; pyrseas = callPackage ../development/tools/database/pyrseas { }; - qtcreator = libsForQt5.callPackage ../development/qtcreator { }; + qtcreator = libsForQt5.callPackage ../development/tools/qtcreator { }; r10k = callPackage ../tools/system/r10k { }; @@ -8390,6 +8437,8 @@ with pkgs; armadillo = callPackage ../development/libraries/armadillo {}; + arrow-cpp = callPackage ../development/libraries/arrow-cpp {}; + assimp = callPackage ../development/libraries/assimp { }; asio = callPackage ../development/libraries/asio { }; @@ -8444,6 +8493,8 @@ with pkgs; libopcodes = callPackage ../development/libraries/libopcodes { }; + bicpl = callPackage ../development/libraries/science/biology/bicpl { }; + # TODO(@Ericson2314): Build bionic libc from source bionic = assert hostPlatform.useAndroidPrebuilt; androidenv.androidndkPkgs.libraries; @@ -8745,6 +8796,7 @@ with pkgs; fflas-ffpack = callPackage ../development/libraries/fflas-ffpack {}; fflas-ffpack_1 = callPackage ../development/libraries/fflas-ffpack/1.nix {}; + linbox = callPackage ../development/libraries/linbox {}; ffmpeg_0_10 = callPackage ../development/libraries/ffmpeg/0.10.nix { inherit (darwin.apple_sdk.frameworks) Cocoa; @@ -8910,7 +8962,7 @@ with pkgs; gettext = callPackage ../development/libraries/gettext { }; - gflags = callPackage ../development/libraries/gflags { }; + gflags = google-gflags; gf2x = callPackage ../development/libraries/gf2x {}; @@ -8945,6 +8997,8 @@ with pkgs; inherit (darwin.apple_sdk.frameworks) Security; }; + glbinding = callPackage ../development/libraries/glbinding { }; + gle = callPackage ../development/libraries/gle { }; glew = callPackage ../development/libraries/glew { }; @@ -8984,6 +9038,7 @@ with pkgs; else if name == "uclibc" then uclibcCross else if name == "musl" then targetPackages.muslCross or muslCross else if name == "msvcrt" then targetPackages.windows.mingw_w64 or windows.mingw_w64 + else if targetPlatform.useiOSPrebuilt then targetPackages.iosSdkPkgs.libraries else if name == "libSystem" then darwin.xcode else throw "Unknown libc"; @@ -9192,7 +9247,7 @@ with pkgs; cairo = callPackage ../development/libraries/cairo { glSupport = config.cairo.gl or (stdenv.isLinux && - !stdenv.isArm && !stdenv.isMips); + !stdenv.isAarch32 && !stdenv.isMips); }; @@ -9418,6 +9473,8 @@ with pkgs; stdenv = llvmPackages_4.stdenv; }; + isso = callPackage ../servers/isso { }; + itk = callPackage ../development/libraries/itk { }; jasper = callPackage ../development/libraries/jasper { }; @@ -9432,6 +9489,8 @@ with pkgs; jemalloc = callPackage ../development/libraries/jemalloc { }; + jemalloc450 = callPackage ../development/libraries/jemalloc/jemalloc450.nix { }; + jshon = callPackage ../development/tools/parsing/jshon { }; json2hcl = callPackage ../development/tools/json2hcl { }; @@ -10732,6 +10791,8 @@ with pkgs; oniguruma = callPackage ../development/libraries/oniguruma { }; + oobicpl = callPackage ../development/libraries/science/biology/oobicpl { }; + openal = self.openalSoft; openalSoft = callPackage ../development/libraries/openal-soft { @@ -10857,6 +10918,8 @@ with pkgs; paperkey = callPackage ../tools/security/paperkey { }; + parquet-cpp = callPackage ../development/libraries/parquet-cpp {}; + pangoxsl = callPackage ../development/libraries/pangoxsl { }; pcaudiolib = callPackage ../development/libraries/pcaudiolib { @@ -11094,7 +11157,7 @@ with pkgs; kservice ktexteditor ktextwidgets kunitconversion kwallet kwayland kwidgetsaddons kwindowsystem kxmlgui kxmlrpcclient modemmanager-qt networkmanager-qt plasma-framework prison solid sonnet syntax-highlighting - threadweaver kirigami2; + threadweaver kirigami2 kholidays; ### KDE PLASMA 5 @@ -11104,7 +11167,7 @@ with pkgs; ### KDE APPLICATIONS inherit (kdeApplications.override { libsForQt5 = self; }) - kholidays libkdcraw libkexiv2 libkipi libkomparediff2 libksane; + libkdcraw libkexiv2 libkipi libkomparediff2 libksane; ### LIBRARIES @@ -11116,10 +11179,6 @@ with pkgs; grantlee = callPackage ../development/libraries/grantlee/5 { }; - inherit (callPackage ../development/libraries/kirigami { }) - kirigami_1 - kirigami_2; - kdb = callPackage ../development/libraries/kdb { }; kdiagram = callPackage ../development/libraries/kdiagram { }; @@ -11128,8 +11187,6 @@ with pkgs; kreport = callPackage ../development/libraries/kreport { }; - kirigami = kirigami_1; - libcommuni = callPackage ../development/libraries/libcommuni { }; libdbusmenu = callPackage ../development/libraries/libdbusmenu-qt/qt-5.5.nix { }; @@ -11255,7 +11312,7 @@ with pkgs; haskellLib = haskell.lib; }; - lambda-mod-zsh-theme = callPackage ../shells/lambda-mod-zsh-theme/default.nix { }; + lambda-mod-zsh-theme = callPackage ../shells/zsh/lambda-mod-zsh-theme { }; leksah = callPackage ../development/tools/haskell/leksah { inherit (haskellPackages) ghcWithPackages; @@ -11295,7 +11352,7 @@ with pkgs; rlog = callPackage ../development/libraries/rlog { }; - rocksdb = callPackage ../development/libraries/rocksdb { }; + rocksdb = callPackage ../development/libraries/rocksdb { jemalloc = jemalloc450; }; rocksdb_lite = rocksdb.override { enableLite = true; }; @@ -12218,7 +12275,10 @@ with pkgs; bftpd = callPackage ../servers/ftp/bftpd {}; - bind = callPackage ../servers/dns/bind { }; + bind = callPackage ../servers/dns/bind { + enablePython = config.bind.enablePython or false; + python3 = python3.withPackages (ps: with ps; [ ply ]); + }; dnsutils = bind.dnsutils; inherit (callPackages ../servers/bird { }) @@ -12900,6 +12960,7 @@ with pkgs; zabbix20 = callPackage ../servers/monitoring/zabbix/2.0.nix { }; zabbix22 = callPackage ../servers/monitoring/zabbix/2.2.nix { }; + zipkin = callPackage ../servers/monitoring/zipkin { }; ### OS-SPECIFIC @@ -12969,9 +13030,6 @@ with pkgs; bluez5 = callPackage ../os-specific/linux/bluez { }; - # Needed for LibreOffice - bluez5_28 = lowPrio (callPackage ../os-specific/linux/bluez/bluez5_28.nix { }); - bluez = bluez5; inherit (python3Packages) bedup; @@ -13322,21 +13380,6 @@ with pkgs; ]; }; - linux_4_15 = callPackage ../os-specific/linux/kernel/linux-4.15.nix { - kernelPatches = - [ kernelPatches.bridge_stp_helper - # See pkgs/os-specific/linux/kernel/cpu-cgroup-v2-patches/README.md - # when adding a new linux version - # kernelPatches.cpu-cgroup-v2."4.11" - kernelPatches.modinst_arg_list_too_long - ] - ++ lib.optionals ((platform.kernelArch or null) == "mips") - [ kernelPatches.mips_fpureg_emu - kernelPatches.mips_fpu_sigill - kernelPatches.mips_ext3_n32 - ]; - }; - linux_4_16 = callPackage ../os-specific/linux/kernel/linux-4.16.nix { kernelPatches = [ kernelPatches.bridge_stp_helper @@ -13344,6 +13387,7 @@ with pkgs; # when adding a new linux version # kernelPatches.cpu-cgroup-v2."4.11" kernelPatches.modinst_arg_list_too_long + kernelPatches.bcm2835_mmal_v4l2_camera_driver # Only needed for 4.16! ] ++ lib.optionals ((platform.kernelArch or null) == "mips") [ kernelPatches.mips_fpureg_emu @@ -13555,7 +13599,6 @@ with pkgs; linuxPackages_4_4 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_4); linuxPackages_4_9 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_9); linuxPackages_4_14 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_14); - linuxPackages_4_15 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_15); linuxPackages_4_16 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_16); # Don't forget to update linuxPackages_latest! @@ -13839,6 +13882,8 @@ with pkgs; powerdns = callPackage ../servers/dns/powerdns { }; + dnsdist = callPackage ../servers/dns/dnsdist { }; + pdns-recursor = callPackage ../servers/dns/pdns-recursor { }; powertop = callPackage ../os-specific/linux/powertop { }; @@ -14191,9 +14236,7 @@ with pkgs; crimson = callPackage ../data/fonts/crimson {}; - dejavu_fonts = lowPrio (callPackage ../data/fonts/dejavu-fonts { - inherit (perlPackages) FontTTF; - }); + dejavu_fonts = lowPrio (callPackage ../data/fonts/dejavu-fonts {}); # solve collision for nix-env before https://github.com/NixOS/nix/pull/815 dejavu_fontsEnv = buildEnv { @@ -14922,6 +14965,8 @@ with pkgs; ffmpeg = ffmpeg_2; }; + bonzomatic = callPackage ../applications/editors/bonzomatic { }; + brackets = callPackage ../applications/editors/brackets { gconf = gnome3.gconf; }; notmuch-bower = callPackage ../applications/networking/mailreaders/notmuch-bower { }; @@ -15087,6 +15132,8 @@ with pkgs; convchain = callPackage ../tools/graphics/convchain {}; + coursera-dl = callPackage ../applications/misc/coursera-dl {}; + coyim = callPackage ../applications/networking/instant-messengers/coyim {}; cpp_ethereum = callPackage ../applications/misc/cpp-ethereum { }; @@ -15206,7 +15253,7 @@ with pkgs; inherit (darwin.apple_sdk.frameworks) Hypervisor vmnet; }; - docker-distribution = callPackage ../applications/virtualization/docker-distribution { }; + docker-distribution = callPackage ../applications/virtualization/docker/distribution.nix { }; docker-credential-gcr = callPackage ../tools/admin/docker-credential-gcr { }; @@ -15216,6 +15263,8 @@ with pkgs; draftsight = callPackage ../applications/graphics/draftsight { }; + dragonfly-reverb = callPackage ../applications/audio/dragonfly-reverb { }; + droopy = callPackage ../applications/networking/droopy { inherit (python3Packages) wrapPython; }; @@ -15224,6 +15273,8 @@ with pkgs; dunst = callPackage ../applications/misc/dunst { }; + du-dust = callPackage ../tools/misc/dust { }; + devede = callPackage ../applications/video/devede { }; denemo = callPackage ../applications/audio/denemo { @@ -15272,9 +15323,9 @@ with pkgs; electrum = callPackage ../applications/misc/electrum { }; - electrum-dash = callPackage ../applications/misc/electrum-dash { }; + electrum-dash = callPackage ../applications/misc/electrum/dash.nix { }; - electrum-ltc = callPackage ../applications/misc/electrum-ltc { }; + electrum-ltc = callPackage ../applications/misc/electrum/ltc.nix { }; elinks = callPackage ../applications/networking/browsers/elinks { }; @@ -15606,6 +15657,8 @@ with pkgs; ghostwriter = libsForQt5.callPackage ../applications/editors/ghostwriter { }; + gitweb = callPackage ../applications/version-management/git-and-tools/gitweb/default.nix { }; + gksu = callPackage ../applications/misc/gksu { }; gnss-sdr = callPackage ../applications/misc/gnss-sdr { }; @@ -15622,15 +15675,15 @@ with pkgs; extraPackages = [ gnuradio-nacl gnuradio-osmosdr gnuradio-gsm gnuradio-ais gnuradio-rds ]; }; - gnuradio-nacl = callPackage ../applications/misc/gnuradio-nacl { }; + gnuradio-nacl = callPackage ../applications/misc/gnuradio/nacl.nix { }; - gnuradio-gsm = callPackage ../applications/misc/gnuradio-gsm { }; + gnuradio-gsm = callPackage ../applications/misc/gnuradio/gsm.nix { }; - gnuradio-ais = callPackage ../applications/misc/gnuradio-ais { }; + gnuradio-ais = callPackage ../applications/misc/gnuradio/ais.nix { }; - gnuradio-rds = callPackage ../applications/misc/gnuradio-rds { }; + gnuradio-rds = callPackage ../applications/misc/gnuradio/rds.nix { }; - gnuradio-osmosdr = callPackage ../applications/misc/gnuradio-osmosdr { }; + gnuradio-osmosdr = callPackage ../applications/misc/gnuradio/osmosdr.nix { }; goldendict = libsForQt5.callPackage ../applications/misc/goldendict { }; @@ -15662,6 +15715,8 @@ with pkgs; grass = callPackage ../applications/gis/grass { }; + grepcidr = callPackage ../applications/search/grepcidr { }; + grepm = callPackage ../applications/search/grepm { }; grip = callPackage ../applications/misc/grip { @@ -16360,6 +16415,7 @@ with pkgs; inherit stdenv lib libsForQt5 fetchurl recurseIntoAttrs; inherit plasma5; inherit attica phonon; + inherit okteta; }; in recurseIntoAttrs (makeOverridable mkApplications attrs); @@ -16368,7 +16424,9 @@ with pkgs; akonadi akregator ark dolphin ffmpegthumbs filelight gwenview k3b kaddressbook kate kcachegrind kcalc kcolorchooser kcontacts kdenlive kdf kdialog keditbookmarks kget kgpg khelpcenter kig kleopatra kmail kmix kolourpaint kompare konsole - kontact korganizer krdc krfb ksystemlog kwalletmanager marble minuet okteta okular spectacle; + kontact korganizer krdc krfb ksystemlog kwalletmanager marble minuet okular spectacle; + + okteta = libsForQt5.callPackage ../applications/editors/okteta { }; kdeconnect = libsForQt5.callPackage ../applications/misc/kdeconnect { }; @@ -16494,7 +16552,6 @@ with pkgs; inherit (gnome2) GConf ORBit2 gnome_vfs; inherit (gnome3) defaultIconTheme; zip = zip.override { enableNLS = false; }; - bluez5 = bluez5_28; fontsConf = makeFontsConf { fontDirectories = [ carlito dejavu_fonts @@ -16509,6 +16566,7 @@ with pkgs; withIcu = true; withGraphite2 = true; }; # checking whether g++ supports C++14 or C++11... configure: error: no + # Still relevant: 2018-04-13 stdenv = overrideCC stdenv gcc5; };}); @@ -16518,11 +16576,13 @@ with pkgs; inherit (gnome2) GConf ORBit2 gnome_vfs; inherit (gnome3) defaultIconTheme; zip = zip.override { enableNLS = false; }; - bluez5 = bluez5_28; poppler = poppler_0_61; fontsConf = makeFontsConf { fontDirectories = [ + carlito dejavu_fonts freefont_ttf xorg.fontmiscmisc + liberation_ttf_v1_binary + liberation_ttf_v2_binary ]; }; clucene_core = clucene_core_2; @@ -16530,8 +16590,8 @@ with pkgs; harfbuzz = harfbuzz.override { withIcu = true; withGraphite2 = true; }; - icu = icu58; # checking whether g++ supports C++14 or C++11... configure: error: no + # Still relevant: 2018-04-13; gcc6 is not enough! stdenv = overrideCC stdenv gcc5; };}); @@ -16734,12 +16794,13 @@ with pkgs; }; xmr-stak = callPackage ../applications/misc/xmr-stak { + stdenvGcc6 = overrideCC stdenv gcc6; hwloc = hwloc-nox; }; xmrig = callPackage ../applications/misc/xmrig { }; - xmrig-proxy = callPackage ../applications/misc/xmrig-proxy { }; + xmrig-proxy = callPackage ../applications/misc/xmrig/proxy.nix { }; monkeysAudio = callPackage ../applications/audio/monkeys-audio { }; @@ -16759,27 +16820,27 @@ with pkgs; mopidy = callPackage ../applications/audio/mopidy { }; - mopidy-gmusic = callPackage ../applications/audio/mopidy-gmusic { }; + mopidy-gmusic = callPackage ../applications/audio/mopidy/gmusic.nix { }; - mopidy-local-images = callPackage ../applications/audio/mopidy-local-images { }; + mopidy-local-images = callPackage ../applications/audio/mopidy/local-images.nix { }; - mopidy-local-sqlite = callPackage ../applications/audio/mopidy-local-sqlite { }; + mopidy-local-sqlite = callPackage ../applications/audio/mopidy/local-sqlite.nix { }; - mopidy-spotify = callPackage ../applications/audio/mopidy-spotify { }; + mopidy-spotify = callPackage ../applications/audio/mopidy/spotify.nix { }; - mopidy-moped = callPackage ../applications/audio/mopidy-moped { }; + mopidy-moped = callPackage ../applications/audio/mopidy/moped.nix { }; - mopidy-mopify = callPackage ../applications/audio/mopidy-mopify { }; + mopidy-mopify = callPackage ../applications/audio/mopidy/mopify.nix { }; - mopidy-spotify-tunigo = callPackage ../applications/audio/mopidy-spotify-tunigo { }; + mopidy-spotify-tunigo = callPackage ../applications/audio/mopidy/spotify-tunigo.nix { }; - mopidy-youtube = callPackage ../applications/audio/mopidy-youtube { }; + mopidy-youtube = callPackage ../applications/audio/mopidy/youtube.nix { }; - mopidy-soundcloud = callPackage ../applications/audio/mopidy-soundcloud { }; + mopidy-soundcloud = callPackage ../applications/audio/mopidy/soundcloud.nix { }; - mopidy-musicbox-webclient = callPackage ../applications/audio/mopidy-musicbox-webclient { }; + mopidy-musicbox-webclient = callPackage ../applications/audio/mopidy/musicbox-webclient.nix { }; - mopidy-iris = callPackage ../applications/audio/mopidy-iris { }; + mopidy-iris = callPackage ../applications/audio/mopidy/iris.nix { }; motif = callPackage ../development/libraries/motif { }; @@ -17248,6 +17309,8 @@ with pkgs; pidgin-window-merge = callPackage ../applications/networking/instant-messengers/pidgin-plugins/window-merge { }; + purple-discord = callPackage ../applications/networking/instant-messengers/pidgin-plugins/purple-discord { }; + purple-hangouts = callPackage ../applications/networking/instant-messengers/pidgin-plugins/purple-hangouts { }; purple-matrix = callPackage ../applications/networking/instant-messengers/pidgin-plugins/purple-matrix { }; @@ -17306,6 +17369,11 @@ with pkgs; qiv = callPackage ../applications/graphics/qiv { }; + processing = processing3; + processing3 = callPackage ../applications/graphics/processing3 { + jdk = oraclejdk8; + }; + # perhaps there are better apps for this task? It's how I had configured my preivous system. # And I don't want to rewrite all rules procmail = callPackage ../applications/misc/procmail { }; @@ -17356,7 +17424,7 @@ with pkgs; inherit (darwin.stubs) rez setfile; }; - qemu-riscv = callPackage ../applications/virtualization/qemu/riscv.nix {}; + qemu-riscv = lowPrio (callPackage ../applications/virtualization/qemu/riscv.nix {}); qgis = callPackage ../applications/gis/qgis { inherit (darwin.apple_sdk.frameworks) IOKit ApplicationServices; @@ -17719,7 +17787,7 @@ with pkgs; dropbox = callPackage ../applications/networking/dropbox { }; - dropbox-cli = callPackage ../applications/networking/dropbox-cli { }; + dropbox-cli = callPackage ../applications/networking/dropbox/cli.nix { }; insync = callPackage ../applications/networking/insync { }; @@ -17730,13 +17798,13 @@ with pkgs; lightdm_qt = lightdm.override { withQt5 = true; }; - lightdm_gtk_greeter = callPackage ../applications/display-managers/lightdm-gtk-greeter { + lightdm_gtk_greeter = callPackage ../applications/display-managers/lightdm/gtk-greeter.nix { inherit (xfce) exo; }; slic3r = callPackage ../applications/misc/slic3r { }; - slic3r-prusa3d = callPackage ../applications/misc/slic3r-prusa3d { }; + slic3r-prusa3d = callPackage ../applications/misc/slic3r/prusa3d.nix { }; curaengine_stable = callPackage ../applications/misc/curaengine/stable.nix { }; cura_stable = callPackage ../applications/misc/cura/stable.nix { @@ -17802,6 +17870,9 @@ with pkgs; inherit (gnome2) GConf; libgcrypt = libgcrypt_1_5; libpng = libpng12; + curl = curl.override { + sslSupport = false; gnutlsSupport = true; + }; }; libspotify = callPackage ../development/libraries/libspotify { @@ -17942,9 +18013,7 @@ with pkgs; terminal-notifier = callPackage ../applications/misc/terminal-notifier {}; - terminator = callPackage ../applications/misc/terminator { - vte = gnome2.vte.override { pythonSupport = true; }; - }; + terminator = callPackage ../applications/misc/terminator { }; terminus = callPackage ../applications/misc/terminus { inherit (gnome2) GConf; }; @@ -18281,7 +18350,7 @@ with pkgs; vscode = callPackage ../applications/editors/vscode { }; - vscode-with-extensions = callPackage ../applications/editors/vscode-with-extensions {}; + vscode-with-extensions = callPackage ../applications/editors/vscode/with-extensions.nix {}; vscode-utils = callPackage ../misc/vscode-extensions/vscode-utils.nix {}; @@ -18636,21 +18705,21 @@ with pkgs; packages = self: []; }; - xmonad_log_applet_gnome2 = callPackage ../applications/window-managers/xmonad-log-applet { + xmonad_log_applet_gnome2 = callPackage ../applications/window-managers/xmonad/log-applet { desktopSupport = "gnome2"; inherit (xfce) libxfce4util xfce4-panel; gnome2_panel = gnome2.gnome_panel; GConf2 = gnome2.GConf; }; - xmonad_log_applet_gnome3 = callPackage ../applications/window-managers/xmonad-log-applet { + xmonad_log_applet_gnome3 = callPackage ../applications/window-managers/xmonad/log-applet { desktopSupport = "gnome3"; inherit (xfce) libxfce4util xfce4-panel; gnome2_panel = gnome2.gnome_panel; GConf2 = gnome2.GConf; }; - xmonad_log_applet_xfce = callPackage ../applications/window-managers/xmonad-log-applet { + xmonad_log_applet_xfce = callPackage ../applications/window-managers/xmonad/log-applet { desktopSupport = "xfce4"; inherit (xfce) libxfce4util xfce4-panel; gnome2_panel = gnome2.gnome_panel; @@ -18723,6 +18792,8 @@ with pkgs; yarp = callPackage ../applications/science/robotics/yarp {}; + yarssr = callPackage ../applications/misc/yarssr { }; + yate = callPackage ../applications/misc/yate { }; yed = callPackage ../applications/graphics/yed {}; @@ -19035,6 +19106,8 @@ with pkgs; gnujump = callPackage ../games/gnujump { }; + gnushogi = callPackage ../games/gnushogi { }; + gogui = callPackage ../games/gogui {}; gtetrinet = callPackage ../games/gtetrinet { @@ -19494,6 +19567,13 @@ with pkgs; xsokoban = callPackage ../games/xsokoban { }; + inherit (callPackage ../games/quake2/yquake2 { }) + yquake2 + yquake2-ctf + yquake2-ground-zero + yquake2-the-reckoning + yquake2-all-games; + zandronum = callPackage ../games/zandronum { }; zandronum-server = zandronum.override { @@ -19520,7 +19600,10 @@ with pkgs; clearlooks-phenix = callPackage ../misc/themes/clearlooks-phenix { }; - deepin = recurseIntoAttrs (callPackage ../desktops/deepin { }); + deepin = recurseIntoAttrs (import ../desktops/deepin { + inherit pkgs libsForQt5; + inherit (lib) makeScope; + }); enlightenment = recurseIntoAttrs (callPackage ../desktops/enlightenment { callPackage = newScope pkgs.enlightenment; @@ -19681,10 +19764,16 @@ with pkgs; emboss = callPackage ../applications/science/biology/emboss { }; + ezminc = callPackage ../applications/science/biology/EZminc { }; + htslib = callPackage ../development/libraries/science/biology/htslib { }; igv = callPackage ../applications/science/biology/igv { }; + inormalize = callPackage ../applications/science/biology/inormalize { + inherit (perlPackages) GetoptTabular MNI-Perllib; + }; + iv = callPackage ../applications/science/biology/iv { neuron-version = neuron.version; }; @@ -19693,6 +19782,10 @@ with pkgs; muscle = callPackage ../applications/science/biology/muscle/default.nix { }; + n3 = callPackage ../applications/science/biology/N3 { + inherit (perlPackages) perl GetoptTabular MNI-Perllib; + }; + neuron = callPackage ../applications/science/biology/neuron { python = null; }; @@ -19705,7 +19798,17 @@ with pkgs; mrbayes = callPackage ../applications/science/biology/mrbayes { }; - minc-tools = callPackage ../applications/science/biology/minc-tools { }; + minc_tools = callPackage ../applications/science/biology/minc-tools { + inherit (perlPackages) TextFormat; + }; + + minc_widgets = callPackage ../applications/science/biology/minc-widgets { + inherit (perlPackages) GetoptTabular MNI-Perllib; + }; + + mni_autoreg = callPackage ../applications/science/biology/mni_autoreg { + inherit (perlPackages) GetoptTabular MNI-Perllib; + }; ncbi_tools = callPackage ../applications/science/biology/ncbi-tools { }; @@ -19762,7 +19865,13 @@ with pkgs; blas = callPackage ../development/libraries/science/math/blas { }; - clblas = callPackage ../development/libraries/science/math/clblas { }; + clblas = callPackage ../development/libraries/science/math/clblas { + inherit (darwin.apple_sdk.frameworks) Accelerate CoreGraphics CoreVideo OpenCL; + }; + + cliquer = callPackage ../development/libraries/science/math/cliquer { }; + + flintqs = callPackage ../development/libraries/science/math/flintqs { }; jags = callPackage ../applications/science/math/jags { }; @@ -19782,6 +19891,8 @@ with pkgs; m4ri = callPackage ../development/libraries/science/math/m4ri { }; + m4rie = callPackage ../development/libraries/science/math/m4rie { }; + nasc = callPackage ../applications/science/math/nasc { }; openblas = callPackage ../development/libraries/science/math/openblas { }; @@ -19794,6 +19905,10 @@ with pkgs; openspecfun = callPackage ../development/libraries/science/math/openspecfun {}; + planarity = callPackage ../development/libraries/science/math/planarity { }; + + rankwidth = callPackage ../development/libraries/science/math/rankwidth { }; + fenics = callPackage ../development/libraries/science/math/fenics { inherit (python3Packages) numpy ply pytest python six sympy; pythonPackages = python3Packages; @@ -19801,6 +19916,10 @@ with pkgs; docs = true; }; + lcalc = callPackage ../development/libraries/science/math/lcalc { }; + + lrcalc = callPackage ../applications/science/math/lrcalc { }; + lie = callPackage ../applications/science/math/LiE { }; magma = callPackage ../development/libraries/science/math/magma { }; @@ -19813,6 +19932,8 @@ with pkgs; nauty = callPackage ../applications/science/math/nauty {}; + rubiks = callPackage ../development/libraries/science/math/rubiks { }; + petsc = callPackage ../development/libraries/science/math/petsc { }; sage = callPackage ../applications/science/math/sage { }; @@ -19825,10 +19946,14 @@ with pkgs; symmetrica = callPackage ../applications/science/math/symmetrica {}; + sympow = callPackage ../development/libraries/science/math/sympow { }; + ipopt = callPackage ../development/libraries/science/math/ipopt { openblas = openblasCompat; }; gmsh = callPackage ../applications/science/math/gmsh { }; + zn_poly = callPackage ../development/libraries/science/math/zn_poly { }; + ### SCIENCE/MOLECULAR-DYNAMICS lammps = callPackage ../applications/science/molecular-dynamics/lammps { @@ -20048,6 +20173,9 @@ with pkgs; z3 = callPackage ../applications/science/logic/z3 { python = python2; }; tlaplus = callPackage ../applications/science/logic/tlaplus {}; + tlaps = callPackage ../applications/science/logic/tlaplus/tlaps.nix {}; + tlaplusToolbox = callPackage ../applications/science/logic/tlaplus/toolbox.nix {gtk = gtk2;}; + aiger = callPackage ../applications/science/logic/aiger {}; @@ -20155,7 +20283,8 @@ with pkgs; pari = callPackage ../applications/science/math/pari { tex = texlive.combined.scheme-basic; }; gp2c = callPackage ../applications/science/math/pari/gp2c.nix { }; - pari-unstable = callPackage ../applications/science/math/pari/unstable.nix {}; + + palp = callPackage ../applications/science/math/palp { }; ratpoints = callPackage ../applications/science/math/ratpoints {}; @@ -20169,6 +20298,8 @@ with pkgs; inherit (gnome3) gtksourceview; }; + pynac = callPackage ../applications/science/math/pynac { }; + singular = callPackage ../applications/science/math/singular { }; scilab = callPackage ../applications/science/math/scilab { @@ -20980,9 +21111,9 @@ with pkgs; staging = base.override { wineRelease = "staging"; }; }; - wine = winePackages.base; + wine = winePackages.full; - wineStaging = lowPrio (winePackages.full.override { + wine-staging = lowPrio (winePackages.full.override { wineRelease = "staging"; }); @@ -21234,8 +21365,15 @@ with pkgs; mmark = callPackage ../tools/typesetting/mmark { }; + wire-desktop = callPackage ../applications/networking/instant-messengers/wire-desktop { }; + + teseq = callPackage ../applications/misc/teseq { }; + # Unix tools unixtools = recurseIntoAttrs (callPackages ./unix-tools.nix { }); inherit (unixtools) hexdump ps logger eject umount mount wall hostname more sysctl; + + inherit (recurseIntoAttrs (callPackages ../os-specific/bsd { })) + netbsd openbsd; } diff --git a/pkgs/top-level/coq-packages.nix b/pkgs/top-level/coq-packages.nix index 43d6d8d2dd5e..e21445b423d0 100644 --- a/pkgs/top-level/coq-packages.nix +++ b/pkgs/top-level/coq-packages.nix @@ -72,7 +72,7 @@ in rec { version = "8.7.2"; }; coq_8_8 = callPackage ../applications/science/logic/coq { - version = "8.8+beta1"; + version = "8.8.0"; }; coqPackages_8_5 = mkCoqPackages coq_8_5; diff --git a/pkgs/top-level/darwin-packages.nix b/pkgs/top-level/darwin-packages.nix index d1d5aa470bca..d2d41792c461 100644 --- a/pkgs/top-level/darwin-packages.nix +++ b/pkgs/top-level/darwin-packages.nix @@ -1,4 +1,6 @@ -{ pkgs, darwin, stdenv, callPackage, callPackages, newScope }: +{ buildPackages, pkgs, targetPackages +, darwin, stdenv, callPackage, callPackages, newScope +}: let apple-source-releases = callPackage ../os-specific/darwin/apple-source-releases { }; @@ -10,19 +12,23 @@ in apple_sdk = callPackage ../os-specific/darwin/apple-sdk { }; + binutils-unwrapped = callPackage ../os-specific/darwin/binutils { + inherit (darwin) cctools; + inherit (pkgs) binutils-unwrapped; + }; + binutils = pkgs.wrapBintoolsWith { libc = if pkgs.targetPlatform != pkgs.hostPlatform then pkgs.libcCross else pkgs.stdenv.cc.libc; - bintools = callPackage ../os-specific/darwin/binutils { - inherit (darwin) cctools; - }; + bintools = darwin.binutils-unwrapped; }; cctools = callPackage ../os-specific/darwin/cctools/port.nix { inherit (darwin) libobjc maloader; stdenv = if stdenv.isDarwin then stdenv else pkgs.libcxxStdenv; + libcxxabi = pkgs.libcxxabi; xctoolchain = darwin.xcode.toolchain; }; @@ -39,8 +45,10 @@ in insert_dylib = callPackage ../os-specific/darwin/insert_dylib { }; - ios-cross = callPackage ../os-specific/darwin/ios-cross { - inherit (darwin) binutils; + iosSdkPkgs = darwin.callPackage ../os-specific/darwin/ios-sdk-pkgs { + buildIosSdk = buildPackages.darwin.iosSdkPkgs.sdk; + targetIosSdkPkgs = targetPackages.darwin.iosSdkPkgs; + inherit (pkgs.llvmPackages) clang-unwrapped; }; libobjc = apple-source-releases.objc4; diff --git a/pkgs/top-level/haskell-packages.nix b/pkgs/top-level/haskell-packages.nix index f9cd2eb94337..48980e48f1d4 100644 --- a/pkgs/top-level/haskell-packages.nix +++ b/pkgs/top-level/haskell-packages.nix @@ -19,7 +19,10 @@ let inherit pkgs; }; - callPackage = newScope { inherit haskellLib; }; + callPackage = newScope { + inherit haskellLib; + overrides = pkgs.haskell.packageOverrides; + }; bootstrapPackageSet = self: super: { mkDerivation = drv: super.mkDerivation (drv // { @@ -99,6 +102,9 @@ in rec { (name: compiler."${name}".override { enableIntegerSimple = true; })); }; + # Default overrides that are applied to all package sets. + packageOverrides = self : super : {}; + # Always get compilers from `buildPackages` packages = let bh = buildPackages.haskell; in { diff --git a/pkgs/top-level/lua-packages.nix b/pkgs/top-level/lua-packages.nix index a23de670836b..3da443098037 100644 --- a/pkgs/top-level/lua-packages.nix +++ b/pkgs/top-level/lua-packages.nix @@ -738,7 +738,7 @@ let owner = "libmpack"; repo = "libmpack-lua"; rev = version; - sha256 = "1nydi6xbmxwl1fmi32v5v8n74msnmzblzqaqnb102w6vkinampsb"; + sha256 = "0l4k7qmwaa0zpxrlp27yp4pbbyiz3zgxywkm543q6wkzn6wmq8l8"; }; nativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index f101a883df3c..741a58ce588a 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -217,8 +217,6 @@ let easy-format = callPackage ../development/ocaml-modules/easy-format { }; - eff = callPackage ../development/interpreters/eff { }; - eliom = callPackage ../development/ocaml-modules/eliom { lwt = lwt2; js_of_ocaml = js_of_ocaml_2; @@ -334,6 +332,8 @@ let js_of_ocaml-ppx_deriving_json = callPackage ../development/tools/ocaml/js_of_ocaml/ppx_deriving_json.nix {}; + js_of_ocaml-tyxml = callPackage ../development/tools/ocaml/js_of_ocaml/tyxml.nix {}; + jsonm = callPackage ../development/ocaml-modules/jsonm { }; lablgl = callPackage ../development/ocaml-modules/lablgl { }; @@ -1042,6 +1042,8 @@ in rec ocamlPackages_4_06 = mkOcamlPackages (callPackage ../development/compilers/ocaml/4.06.nix { }) (self: super: { }); + ocamlPackages_4_07 = mkOcamlPackages (callPackage ../development/compilers/ocaml/4.07.nix { }) (self: super: { }); + ocamlPackages_latest = ocamlPackages_4_06; ocamlPackages = ocamlPackages_4_05; diff --git a/pkgs/top-level/perl-packages.nix b/pkgs/top-level/perl-packages.nix index 8ab8def15c61..e9d6cd97bc8c 100644 --- a/pkgs/top-level/perl-packages.nix +++ b/pkgs/top-level/perl-packages.nix @@ -7572,6 +7572,18 @@ let self = _self // overrides; _self = with self; { }; }; + iCalParser = buildPerlPackage rec { + name = "iCal-Parser-1.21"; + src = fetchurl { + url = "mirror://cpan/authors/id/R/RI/RIXED/${name}.tar.gz"; + sha256 = "0d7939a644a8e67017ec7239d3d9604f3986bb9a4ff80be68fe7299ebfd2270c"; + }; + propagatedBuildInputs = [ DateTimeFormatICal FreezeThaw IOString TextvFileasData ]; + meta = { + license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; + }; + }; + "if" = null; # For backwards compatibility. @@ -9622,6 +9634,8 @@ let self = _self // overrides; _self = with self; { }; }; + MNI-Perllib = pkgs.callPackage ../development/perl-modules/MNI {}; + Mo = buildPerlPackage rec { name = "Mo-0.40"; src = fetchurl { @@ -9649,6 +9663,7 @@ let self = _self // overrides; _self = with self; { ModernPerl = buildPerlModule { name = "Modern-Perl-1.20170117"; + src = fetchurl { url = mirror://cpan/authors/id/C/CH/CHROMATIC/Modern-Perl-1.20170117.tar.gz; sha256 = "5df2a83461163212db22b9c3353606a1a123616820fe50675041c34f004b3628"; @@ -13549,6 +13564,7 @@ let self = _self // overrides; _self = with self; { }; setOutputFlags = false; buildInputs = [ pkgs.which ]; + patches = [ ../development/perl-modules/Socket6-sv_undef.patch ]; meta = { description = "IPv6 related part of the C socket.h defines and structure manipulators"; license = stdenv.lib.licenses.bsd3; @@ -16223,6 +16239,21 @@ let self = _self // overrides; _self = with self; { }; }; + TextFormat = buildPerlPackage rec { + name = "Text-Format-0.60"; + src = fetchurl { + url = "mirror://cpan/authors/id/S/SH/SHLOMIF/${name}.tar.gz"; + sha256 = "664f313570604624ff9e1fc9b26b6d04e06897b3e4eac83089fc0905a692a2b8"; + }; + buildInputs = [ ModuleBuild ]; + meta = { + homepage = http://www.shlomifish.org/open-source/projects/Text-Format/; + description = "Format text"; + license = with stdenv.lib.licenses; [ artistic1 gpl1Plus ]; + maintainers = with maintainers; [ bcdarwin ]; + }; + }; + TextGerman = buildPerlPackage rec { name = "Text-German-0.06"; src = fetchurl { diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 8e90405cd2e7..0b78cb40656d 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -311,7 +311,11 @@ in { pyamf = callPackage ../development/python-modules/pyamf { }; - pyatspi = disabledIf (!isPy3k) (callPackage ../development/python-modules/pyatspi { }); + pyarrow = callPackage ../development/python-modules/pyarrow { + inherit (pkgs) arrow-cpp cmake pkgconfig; + }; + + pyatspi = callPackage ../development/python-modules/pyatspi { }; pyaxmlparser = callPackage ../development/python-modules/pyaxmlparser { }; @@ -410,6 +414,8 @@ in { rhpl = disabledIf isPy3k (callPackage ../development/python-modules/rhpl {}); + rlp = callPackage ../development/python-modules/rlp { }; + rx = callPackage ../development/python-modules/rx { }; salmon-mail = callPackage ../development/python-modules/salmon-mail { }; @@ -1034,6 +1040,7 @@ in { homepage = https://github.com/skarra/CalDAVClientLibrary/tree/asynkdev/; maintainers = with maintainers; [ pjones ]; + broken = true; # 2018-04-11 }; }; @@ -1177,34 +1184,14 @@ in { cx_oracle = callPackage ../development/python-modules/cx_oracle {}; - cvxopt = buildPythonPackage rec { - name = "${pname}-${version}"; - pname = "cvxopt"; - version = "1.1.7"; - disabled = isPyPy; - src = pkgs.fetchurl { - url = "mirror://pypi/c/${pname}/${name}.tar.gz"; - sha256 = "f856ea2e9e2947abc1a6557625cc6b0e45228984f397a90c420b2f468dc4cb97"; - }; - doCheck = false; - buildInputs = with pkgs; [ openblasCompat ]; - preConfigure = '' - export CVXOPT_BLAS_LIB_DIR=${pkgs.openblasCompat}/lib - export CVXOPT_BLAS_LIB=openblas - export CVXOPT_LAPACK_LIB=openblas - ''; - meta = { - homepage = "http://cvxopt.org/"; - description = "Python Software for Convex Optimization"; - maintainers = with maintainers; [ edwtjo ]; - license = licenses.gpl3Plus; - }; - }; + cvxopt = callPackage ../development/python-modules/cvxopt { }; cycler = callPackage ../development/python-modules/cycler { }; cysignals = callPackage ../development/python-modules/cysignals { }; + cypari2 = callPackage ../development/python-modules/cypari2 { }; + dlib = buildPythonPackage rec { inherit (pkgs.dlib) name src nativeBuildInputs meta; @@ -1215,33 +1202,12 @@ in { datadog = callPackage ../development/python-modules/datadog {}; + dataclasses = callPackage ../development/python-modules/dataclasses { }; + debian = callPackage ../development/python-modules/debian {}; defusedxml = callPackage ../development/python-modules/defusedxml {}; - dosage = buildPythonPackage rec { - name = "${pname}-${version}"; - pname = "dosage"; - version = "2016.03.17"; - PBR_VERSION = version; - src = pkgs.fetchFromGitHub { - owner = "webcomics"; - repo = "dosage"; - rev = "1af022895e5f86bc43da95754c4c4ed305790f5b"; - sha256 = "1bkqhlzigy656pam0znp2ddp1y5sqzyhw3c4fyy58spcafldq4j6"; - }; - buildInputs = with self; [ pytest ]; - propagatedBuildInputs = with self; [ requests lxml pbr ]; - # prompt_toolkit doesn't work on 3.5 on OSX. - doCheck = !isPy35; - - meta = { - description = "A comic strip downloader and archiver"; - homepage = http://dosage.rocks/; - broken = true; # ctypes error - }; - }; - dugong = callPackage ../development/python-modules/dugong {}; iowait = callPackage ../development/python-modules/iowait {}; @@ -1689,6 +1655,8 @@ in { curtsies = callPackage ../development/python-modules/curtsies { }; + envs = callPackage ../development/python-modules/envs { }; + jsonrpc-async = callPackage ../development/python-modules/jsonrpc-async { }; jsonrpc-base = callPackage ../development/python-modules/jsonrpc-base { }; @@ -2589,22 +2557,11 @@ in { fpdf = callPackage ../development/python-modules/fpdf { }; - fritzconnection = callPackage ../development/python-modules/fritzconnection { }; - - frozendict = buildPythonPackage rec { - name = "frozendict-0.5"; + fpylll = callPackage ../development/python-modules/fpylll { }; - src = pkgs.fetchurl { - url = "mirror://pypi/f/frozendict/${name}.tar.gz"; - sha256 = "0m4kg6hbadvf99if78nx01q7qnbyhdw3x4znl5dasgciyi54432n"; - }; + fritzconnection = callPackage ../development/python-modules/fritzconnection { }; - meta = { - homepage = https://github.com/slezica/python-frozendict; - description = "An immutable dictionary"; - license = stdenv.lib.licenses.mit; - }; - }; + frozendict = callPackage ../development/python-modules/frozendict { }; ftputil = callPackage ../development/python-modules/ftputil { }; @@ -2981,7 +2938,6 @@ in { wrapProgram $out/bin/gtimelog \ --prefix GI_TYPELIB_PATH : "$GI_TYPELIB_PATH" \ --prefix LD_LIBRARY_PATH ":" "${pkgs.gtk3.out}/lib" \ - ''; meta = { @@ -3394,6 +3350,7 @@ in { pname = "lightblue"; version = "0.4"; name = "${pname}-${version}"; + disabled = isPy3k; # build fails, 2018-04-11 src = pkgs.fetchurl { url = "mirror://sourceforge/${pname}/${name}.tar.gz"; @@ -3581,6 +3538,8 @@ in { }; }; + misaka = callPackage ../development/python-modules/misaka {}; + mt-940 = callPackage ../development/python-modules/mt-940 { }; mwlib = let @@ -5563,6 +5522,10 @@ in { flask_assets = callPackage ../development/python-modules/flask-assets { }; + flask-autoindex = callPackage ../development/python-modules/flask-autoindex { }; + + flask-babel = callPackage ../development/python-modules/flask-babel { }; + flask_cache = buildPythonPackage rec { name = "Flask-Cache-0.13.1"; @@ -5612,6 +5575,8 @@ in { flask_script = callPackage ../development/python-modules/flask-script { }; + flask-silk = callPackage ../development/python-modules/flask-silk { }; + flask_sqlalchemy = buildPythonPackage rec { name = "Flask-SQLAlchemy-${version}"; version = "2.1"; @@ -7666,6 +7631,8 @@ in { micawber = callPackage ../development/python-modules/micawber { }; + milksnake = callPackage ../development/python-modules/milksnake { }; + minimock = buildPythonPackage rec { version = "1.2.8"; name = "minimock-${version}"; @@ -8887,7 +8854,7 @@ in { dynd = buildPythonPackage rec { version = "0.7.2"; name = "dynd-${version}"; - disabled = isPyPy; + disabled = isPyPy || !isPy3k; # tests fail on python2, 2018-04-11 src = pkgs.fetchFromGitHub { owner = "libdynd"; @@ -10509,6 +10476,7 @@ in { meta = { description = "Interface for working with block devices"; license = licenses.gpl2Plus; + broken = isPy3k; # doesn't build on python 3, 2018-04-11 }; }; @@ -10571,6 +10539,7 @@ in { license = licenses.bsd2; platforms = platforms.all; homepage = "http://jparyani.github.io/pycapnp/index.html"; + broken = true; # 2018-04-11 }; }; @@ -11859,12 +11828,12 @@ in { python-wifi = buildPythonPackage rec { name = "python-wifi-${version}"; - version = "0.6.0"; + version = "0.6.1"; disabled = ! (isPy26 || isPy27 ); src = pkgs.fetchurl { url = "mirror://pypi/p/python-wifi/${name}.tar.bz2"; - sha256 = "504639e5953eaec0e41758900fbe143d33d82ea86762b19b659a118c77d8403d"; + sha256 = "149c3dznb63d82143cz5hqdim0mqjysz6p3yk0zv271vq3xnmzvv"; }; meta = { @@ -12485,28 +12454,7 @@ in { rpmfluff = callPackage ../development/python-modules/rpmfluff {}; - rpy2 = buildPythonPackage rec { - name = "rpy2-2.8.2"; - disabled = isPyPy; - src = pkgs.fetchurl { - url = "mirror://pypi/r/rpy2/${name}.tar.gz"; - sha256 = "2c1a313df4e64236dcfe1078ce847b8e3c180656c894928d3a4b391aacb9b24c"; - }; - buildInputs = with pkgs; [ readline R pcre lzma bzip2 zlib icu ]; - propagatedBuildInputs = with self; [ singledispatch six ]; - - # According to manual this is how the testsuite should be invoked - checkPhase = '' - ${python.interpreter} -m rpy2.tests - ''; - meta = { - homepage = http://rpy.sourceforge.net/rpy2; - description = "Python interface to R"; - license = licenses.gpl2Plus; - maintainers = with maintainers; [ joelmo ]; - broken = true; - }; - }; + rpy2 = callPackage ../development/python-modules/rpy2 {}; rpyc = buildPythonPackage rec { name = "rpyc-${version}"; @@ -16689,20 +16637,7 @@ EOF }; }; - canonicaljson = buildPythonPackage rec { - name = "canonicaljson-${version}"; - version = "1.0.0"; - - src = pkgs.fetchgit { - url = "https://github.com/matrix-org/python-canonicaljson.git"; - rev = "refs/tags/v${version}"; - sha256 = "0r82zlip93y169ijkn8xpbp0yr22mf92pni6dw420vb53l27sprq"; - }; - - propagatedBuildInputs = with self; [ - frozendict simplejson - ]; - }; + canonicaljson = callPackage ../development/python-modules/canonicaljson { }; daemonize = buildPythonPackage rec { name = "daemonize-${version}"; @@ -18336,6 +18271,8 @@ EOF sseclient = callPackage ../development/python-modules/sseclient { }; + warrant = callPackage ../development/python-modules/warrant { }; + textacy = callPackage ../development/python-modules/textacy { }; pyemd = callPackage ../development/python-modules/pyemd { }; @@ -18361,6 +18298,8 @@ EOF wsproto = callPackage ../development/python-modules/wsproto { }; h11 = callPackage ../development/python-modules/h11 { }; + + python-docx = callPackage ../development/python-modules/python-docx { }; }); in fix' (extends overrides packages) diff --git a/pkgs/top-level/release.nix b/pkgs/top-level/release.nix index aee73f206696..3ea873cdc7ff 100644 --- a/pkgs/top-level/release.nix +++ b/pkgs/top-level/release.nix @@ -101,6 +101,9 @@ let jobs.git.x86_64-darwin jobs.mysql.x86_64-darwin jobs.vim.x86_64-darwin + # Ensure that UI stuff works on darwin + jobs.inkscape.x86_64-darwin + jobs.qt5.qtmultimedia.x86_64-darwin jobs.tests.cc-wrapper.x86_64-linux jobs.tests.cc-wrapper.x86_64-darwin diff --git a/pkgs/top-level/unix-tools.nix b/pkgs/top-level/unix-tools.nix index 5bf9278ea426..26adcda8ee17 100644 --- a/pkgs/top-level/unix-tools.nix +++ b/pkgs/top-level/unix-tools.nix @@ -1,4 +1,4 @@ -{ pkgs, buildEnv, runCommand, hostPlatform }: +{ pkgs, buildEnv, runCommand, hostPlatform, lib }: # These are some unix tools that are commonly included in the /usr/bin # and /usr/sbin directory under more normal distributions. Along with @@ -13,7 +13,7 @@ let singleBinary = cmd: providers: let - provider = "${providers.${hostPlatform.parsed.kernel.name} or "missing-package"}/bin/${cmd}"; + provider = "${lib.getBin providers.${hostPlatform.parsed.kernel.name}}/bin/${cmd}"; in runCommand cmd { meta.platforms = map (n: { kernel.name = n; }) (pkgs.lib.attrNames providers); } '' @@ -41,6 +41,10 @@ in rec { linux = pkgs.nettools; darwin = pkgs.darwin.network_cmds; }; + col = singleBinary "col" { + linux = pkgs.utillinux; + darwin = pkgs.darwin.text_cmds; + }; eject = singleBinary "eject" { linux = pkgs.utillinux; }; @@ -92,7 +96,7 @@ in rec { darwin = pkgs.darwin.ps; }; quota = singleBinary "quota" { - linux = pkgs.utillinux; + linux = pkgs.linuxquota; darwin = pkgs.darwin.diskdev_cmds; }; route = singleBinary "route" { @@ -138,7 +142,7 @@ in rec { utillinux = buildEnv { name = "utillinux-compat"; paths = [ fsck fdisk getopt hexdump mount - quota script umount whereis write ]; + script umount whereis write col ]; }; nettools = buildEnv { |