diff options
690 files changed, 22504 insertions, 16269 deletions
diff --git a/.github/CODEOWNERS b/.github/CODEOWNERS index 76fb19529b03..17b830e5fad0 100644 --- a/.github/CODEOWNERS +++ b/.github/CODEOWNERS @@ -12,7 +12,7 @@ # Libraries /lib @edolstra @nbp -/lib/systems @nbp @ericson2314 +/lib/systems @nbp @ericson2314 @matthewbauer /lib/generators.nix @edolstra @nbp @Profpatsch /lib/debug.nix @edolstra @nbp @Profpatsch @@ -20,9 +20,11 @@ /default.nix @nbp /pkgs/top-level/default.nix @nbp @Ericson2314 /pkgs/top-level/impure.nix @nbp @Ericson2314 -/pkgs/top-level/stage.nix @nbp @Ericson2314 -/pkgs/stdenv/generic @Ericson2314 -/pkgs/stdenv/cross @Ericson2314 +/pkgs/top-level/stage.nix @nbp @Ericson2314 @matthewbauer +/pkgs/top-level/splice.nix @Ericson2314 @matthewbauer +/pkgs/top-level/release-cross.nix @Ericson2314 @matthewbauer +/pkgs/stdenv/generic @Ericson2314 @matthewbauer +/pkgs/stdenv/cross @Ericson2314 @matthewbauer /pkgs/build-support/cc-wrapper @Ericson2314 @orivej /pkgs/build-support/bintools-wrapper @Ericson2314 @orivej /pkgs/build-support/setup-hooks @Ericson2314 @@ -74,6 +76,14 @@ /pkgs/stdenv/darwin @NixOS/darwin-maintainers /pkgs/os-specific/darwin @NixOS/darwin-maintainers +# C compilers +/pkgs/development/compilers/gcc @matthewbauer +/pkgs/development/compilers/llvm @matthewbauer + +# Compatibility stuff +/pkgs/top-level/unix-tools.nix @matthewbauer +/pkgs/development/tools/xcbuild @matthewbauer + # Beam-related (Erlang, Elixir, LFE, etc) /pkgs/development/beam-modules @gleber /pkgs/development/interpreters/erlang @gleber @@ -97,3 +107,13 @@ /pkgs/desktops/plasma-5 @ttuegel /pkgs/development/libraries/kde-frameworks @ttuegel /pkgs/development/libraries/qt-5 @ttuegel + +# PostgreSQL and related stuff +/pkgs/servers/sql/postgresql @thoughtpolice +/nixos/modules/services/databases/postgresql.xml @thoughtpolice +/nixos/modules/services/databases/postgresql.nix @thoughtpolice +/nixos/tests/postgresql.nix @thoughtpolice + +# Dhall +/pkgs/development/dhall-modules @Gabriel439 @Profpatsch +/pkgs/development/interpreters/dhall @Gabriel439 @Profpatsch diff --git a/doc/coding-conventions.xml b/doc/coding-conventions.xml index b3f7f093835c..3e8a0ea4a703 100644 --- a/doc/coding-conventions.xml +++ b/doc/coding-conventions.xml @@ -842,9 +842,12 @@ src = fetchFromGitHub { owner = "NixOS"; repo = "nix"; rev = "1f795f9f44607cc5bec70d1300150bfefcef2aae"; - sha256 = "04yri911rj9j19qqqn6m82266fl05pz98inasni0vxr1cf1gdgv9"; + sha256 = "1i2yxndxb6yc9l6c99pypbd92lfq5aac4klq7y2v93c9qvx2cgpc"; } </programlisting> + Find the value to put as <literal>sha256</literal> by running + <literal>nix run -f '<nixpkgs>' nix-prefetch-github -c nix-prefetch-github --rev 1f795f9f44607cc5bec70d1300150bfefcef2aae NixOS nix</literal> + or <literal>nix-prefetch-url --unpack https://github.com/NixOS/nix/archive/1f795f9f44607cc5bec70d1300150bfefcef2aae.tar.gz</literal>. </para> </listitem> </itemizedlist> diff --git a/doc/languages-frameworks/python.section.md b/doc/languages-frameworks/python.section.md index b52b79c62d91..907f4d9152a7 100644 --- a/doc/languages-frameworks/python.section.md +++ b/doc/languages-frameworks/python.section.md @@ -483,8 +483,8 @@ and in this case the `python35` interpreter is automatically used. ### Interpreters -Versions 2.7, 3.4, 3.5, 3.6 and 3.7 of the CPython interpreter are available as -respectively `python27`, `python34`, `python35` and `python36`. The PyPy interpreter +Versions 2.7, 3.5, 3.6 and 3.7 of the CPython interpreter are available as +respectively `python27`, `python35` and `python36`. The PyPy interpreter is available as `pypy`. The aliases `python2` and `python3` correspond to respectively `python27` and `python35`. The default interpreter, `python`, maps to `python2`. The Nix expressions for the interpreters can be found in @@ -507,7 +507,7 @@ Each interpreter has the following attributes: - `buildEnv`. Function to build python interpreter environments with extra packages bundled together. See section *python.buildEnv function* for usage and documentation. - `withPackages`. Simpler interface to `buildEnv`. See section *python.withPackages function* for usage and documentation. - `sitePackages`. Alias for `lib/${libPrefix}/site-packages`. -- `executable`. Name of the interpreter executable, e.g. `python3.4`. +- `executable`. Name of the interpreter executable, e.g. `python3.7`. - `pkgs`. Set of Python packages for that specific interpreter. The package set can be modified by overriding the interpreter and passing `packageOverrides`. ### Building packages and applications @@ -529,7 +529,6 @@ attribute set is created for each available Python interpreter. The available sets are * `pkgs.python27Packages` -* `pkgs.python34Packages` * `pkgs.python35Packages` * `pkgs.python36Packages` * `pkgs.python37Packages` @@ -670,7 +669,7 @@ python3Packages.buildPythonApplication rec { sha256 = "035w8gqql36zlan0xjrzz9j4lh9hs0qrsgnbyw07qs7lnkvbdv9x"; }; - propagatedBuildInputs = with python3Packages; [ tornado_4 pythondaemon ]; + propagatedBuildInputs = with python3Packages; [ tornado_4 python-daemon ]; meta = with lib; { ... @@ -837,7 +836,7 @@ community to help save time. No tool is preferred at the moment. ### Deterministic builds -Python 2.7, 3.5 and 3.6 are now built deterministically and 3.4 mostly. +The Python interpreters are now built deterministically. Minor modifications had to be made to the interpreters in order to generate deterministic bytecode. This has security implications and is relevant for those using Python in a `nix-shell`. diff --git a/doc/quick-start.xml b/doc/quick-start.xml index b9e6d789404a..8dd673ed2733 100644 --- a/doc/quick-start.xml +++ b/doc/quick-start.xml @@ -147,8 +147,8 @@ $ git add pkgs/development/libraries/libfoo/default.nix</screen> </listitem> <listitem> <para> - You can use <command>nix-prefetch-url</command> (or similar - nix-prefetch-git, etc) <replaceable>url</replaceable> to get the + You can use <command>nix-prefetch-url</command> + <replaceable>url</replaceable> to get the SHA-256 hash of source distributions. There are similar commands as <command>nix-prefetch-git</command> and <command>nix-prefetch-hg</command> available in diff --git a/lib/debug.nix b/lib/debug.nix index 383eb32d75d0..2879f72ed2ba 100644 --- a/lib/debug.nix +++ b/lib/debug.nix @@ -23,27 +23,54 @@ rec { # -- TRACING -- - /* Trace msg, but only if pred is true. + /* Conditionally trace the supplied message, based on a predicate. + + Type: traceIf :: bool -> string -> a -> a Example: traceIf true "hello" 3 trace: hello => 3 */ - traceIf = pred: msg: x: if pred then trace msg x else x; + traceIf = + # Predicate to check + pred: + # Message that should be traced + msg: + # Value to return + x: if pred then trace msg x else x; + + /* Trace the supplied value after applying a function to it, and + return the original value. - /* Trace the value and also return it. + Type: traceValFn :: (a -> b) -> a -> a Example: traceValFn (v: "mystring ${v}") "foo" trace: mystring foo => "foo" */ - traceValFn = f: x: trace (f x) x; + traceValFn = + # Function to apply + f: + # Value to trace and return + x: trace (f x) x; + + /* Trace the supplied value and return it. + + Type: traceVal :: a -> a + + Example: + traceVal 42 + # trace: 42 + => 42 + */ traceVal = traceValFn id; /* `builtins.trace`, but the value is `builtins.deepSeq`ed first. + Type: traceSeq :: a -> b -> b + Example: trace { a.b.c = 3; } null trace: { a = <CODE>; } @@ -52,7 +79,11 @@ rec { trace: { a = { b = { c = 3; }; }; } => null */ - traceSeq = x: y: trace (builtins.deepSeq x x) y; + traceSeq = + # The value to trace + x: + # The value to return + y: trace (builtins.deepSeq x x) y; /* Like `traceSeq`, but only evaluate down to depth n. This is very useful because lots of `traceSeq` usages @@ -76,27 +107,49 @@ rec { in trace (generators.toPretty { allowPrettyValues = true; } (modify depth snip x)) y; - /* A combination of `traceVal` and `traceSeq` */ - traceValSeqFn = f: v: traceValFn f (builtins.deepSeq v v); + /* A combination of `traceVal` and `traceSeq` that applies a + provided function to the value to be traced after `deepSeq`ing + it. + */ + traceValSeqFn = + # Function to apply + f: + # Value to trace + v: traceValFn f (builtins.deepSeq v v); + + /* A combination of `traceVal` and `traceSeq`. */ traceValSeq = traceValSeqFn id; + /* A combination of `traceVal` and `traceSeqN` that applies a + provided function to the value to be traced. */ + traceValSeqNFn = + # Function to apply + f: + depth: + # Value to trace + v: traceSeqN depth (f v) v; + /* A combination of `traceVal` and `traceSeqN`. */ - traceValSeqNFn = f: depth: v: traceSeqN depth (f v) v; traceValSeqN = traceValSeqNFn id; # -- TESTING -- - /* Evaluate a set of tests. A test is an attribute set {expr, - expected}, denoting an expression and its expected result. The - result is a list of failed tests, each represented as {name, - expected, actual}, denoting the attribute name of the failing - test and its expected and actual results. Used for regression - testing of the functions in lib; see tests.nix for an example. - Only tests having names starting with "test" are run. - Add attr { tests = ["testName"]; } to run these test only + /* Evaluate a set of tests. A test is an attribute set `{expr, + expected}`, denoting an expression and its expected result. The + result is a list of failed tests, each represented as `{name, + expected, actual}`, denoting the attribute name of the failing + test and its expected and actual results. + + Used for regression testing of the functions in lib; see + tests.nix for an example. Only tests having names starting with + "test" are run. + + Add attr { tests = ["testName"]; } to run these tests only. */ - runTests = tests: lib.concatLists (lib.attrValues (lib.mapAttrs (name: test: + runTests = + # Tests to run + tests: lib.concatLists (lib.attrValues (lib.mapAttrs (name: test: let testsToRun = if tests ? tests then tests.tests else []; in if (substring 0 4 name == "test" || elem name testsToRun) && ((testsToRun == []) || elem name tests.tests) @@ -105,8 +158,11 @@ rec { then [ { inherit name; expected = test.expected; result = test.expr; } ] else [] ) tests)); - # create a test assuming that list elements are true - # usage: { testX = allTrue [ true ]; } + /* Create a test assuming that list elements are `true`. + + Example: + { testX = allTrue [ true ]; } + */ testAllTrue = expr: { inherit expr; expected = map (x: true) expr; }; diff --git a/lib/licenses.nix b/lib/licenses.nix index 611e6ddb35b7..092cbbbdb25a 100644 --- a/lib/licenses.nix +++ b/lib/licenses.nix @@ -309,6 +309,12 @@ lib.mapAttrs (n: v: v // { shortName = n; }) rec { fullName = "GNU General Public License v2.0 only"; }; + gpl2Classpath = { + spdxId = "GPL-2.0-with-classpath-exception"; + fullName = "GNU General Public License v2.0 only (with Classpath exception)"; + url = https://fedoraproject.org/wiki/Licensing/GPL_Classpath_Exception; + }; + gpl2ClasspathPlus = { fullName = "GNU General Public License v2.0 or later (with Classpath exception)"; url = https://fedoraproject.org/wiki/Licensing/GPL_Classpath_Exception; @@ -394,6 +400,10 @@ lib.mapAttrs (n: v: v // { shortName = n; }) rec { free = false; }; + jasper = spdx { + spdxId = "JasPer-2.0"; + fullName = "JasPer License"; + }; lgpl2 = spdx { spdxId = "LGPL-2.0"; diff --git a/lib/lists.nix b/lib/lists.nix index 9ecd8f220038..be541427c247 100644 --- a/lib/lists.nix +++ b/lib/lists.nix @@ -1,4 +1,5 @@ # General list operations. + { lib }: with lib.trivial; let @@ -8,21 +9,23 @@ rec { inherit (builtins) head tail length isList elemAt concatLists filter elem genList; - /* Create a list consisting of a single element. `singleton x' is - sometimes more convenient with respect to indentation than `[x]' + /* Create a list consisting of a single element. `singleton x` is + sometimes more convenient with respect to indentation than `[x]` when x spans multiple lines. + Type: singleton :: a -> [a] + Example: singleton "foo" => [ "foo" ] */ singleton = x: [x]; - /* “right fold” a binary function `op' between successive elements of - `list' with `nul' as the starting value, i.e., - `foldr op nul [x_1 x_2 ... x_n] == op x_1 (op x_2 ... (op x_n nul))'. - Type: - foldr :: (a -> b -> b) -> b -> [a] -> b + /* “right fold” a binary function `op` between successive elements of + `list` with `nul' as the starting value, i.e., + `foldr op nul [x_1 x_2 ... x_n] == op x_1 (op x_2 ... (op x_n nul))`. + + Type: foldr :: (a -> b -> b) -> b -> [a] -> b Example: concat = foldr (a: b: a + b) "z" @@ -42,16 +45,15 @@ rec { else op (elemAt list n) (fold' (n + 1)); in fold' 0; - /* `fold' is an alias of `foldr' for historic reasons */ + /* `fold` is an alias of `foldr` for historic reasons */ # FIXME(Profpatsch): deprecate? fold = foldr; - /* “left fold”, like `foldr', but from the left: + /* “left fold”, like `foldr`, but from the left: `foldl op nul [x_1 x_2 ... x_n] == op (... (op (op nul x_1) x_2) ... x_n)`. - Type: - foldl :: (b -> a -> b) -> b -> [a] -> b + Type: foldl :: (b -> a -> b) -> b -> [a] -> b Example: lconcat = foldl (a: b: a + b) "z" @@ -70,16 +72,20 @@ rec { else op (foldl' (n - 1)) (elemAt list n); in foldl' (length list - 1); - /* Strict version of `foldl'. + /* Strict version of `foldl`. The difference is that evaluation is forced upon access. Usually used with small whole results (in contract with lazily-generated list or large lists where only a part is consumed.) + + Type: foldl' :: (b -> a -> b) -> b -> [a] -> b */ foldl' = builtins.foldl' or foldl; /* Map with index starting from 0 + Type: imap0 :: (int -> a -> b) -> [a] -> [b] + Example: imap0 (i: v: "${v}-${toString i}") ["a" "b"] => [ "a-0" "b-1" ] @@ -88,6 +94,8 @@ rec { /* Map with index starting from 1 + Type: imap1 :: (int -> a -> b) -> [a] -> [b] + Example: imap1 (i: v: "${v}-${toString i}") ["a" "b"] => [ "a-1" "b-2" ] @@ -96,6 +104,8 @@ rec { /* Map and concatenate the result. + Type: concatMap :: (a -> [b]) -> [a] -> [b] + Example: concatMap (x: [x] ++ ["z"]) ["a" "b"] => [ "a" "z" "b" "z" ] @@ -118,15 +128,21 @@ rec { /* Remove elements equal to 'e' from a list. Useful for buildInputs. + Type: remove :: a -> [a] -> [a] + Example: remove 3 [ 1 3 4 3 ] => [ 1 4 ] */ - remove = e: filter (x: x != e); + remove = + # Element to remove from the list + e: filter (x: x != e); /* Find the sole element in the list matching the specified - predicate, returns `default' if no such element exists, or - `multiple' if there are multiple matching elements. + predicate, returns `default` if no such element exists, or + `multiple` if there are multiple matching elements. + + Type: findSingle :: (a -> bool) -> a -> a -> [a] -> a Example: findSingle (x: x == 3) "none" "multiple" [ 1 3 3 ] @@ -136,14 +152,24 @@ rec { findSingle (x: x == 3) "none" "multiple" [ 1 9 ] => "none" */ - findSingle = pred: default: multiple: list: + findSingle = + # Predicate + pred: + # Default value to return if element was not found. + default: + # Default value to return if more than one element was found + multiple: + # Input list + list: let found = filter pred list; len = length found; in if len == 0 then default else if len != 1 then multiple else head found; /* Find the first element in the list matching the specified - predicate or returns `default' if no such element exists. + predicate or return `default` if no such element exists. + + Type: findFirst :: (a -> bool) -> a -> [a] -> a Example: findFirst (x: x > 3) 7 [ 1 6 4 ] @@ -151,12 +177,20 @@ rec { findFirst (x: x > 9) 7 [ 1 6 4 ] => 7 */ - findFirst = pred: default: list: + findFirst = + # Predicate + pred: + # Default value to return + default: + # Input list + list: let found = filter pred list; in if found == [] then default else head found; - /* Return true iff function `pred' returns true for at least element - of `list'. + /* Return true if function `pred` returns true for at least one + element of `list`. + + Type: any :: (a -> bool) -> [a] -> bool Example: any isString [ 1 "a" { } ] @@ -166,8 +200,10 @@ rec { */ any = builtins.any or (pred: foldr (x: y: if pred x then true else y) false); - /* Return true iff function `pred' returns true for all elements of - `list'. + /* Return true if function `pred` returns true for all elements of + `list`. + + Type: all :: (a -> bool) -> [a] -> bool Example: all (x: x < 3) [ 1 2 ] @@ -177,19 +213,25 @@ rec { */ all = builtins.all or (pred: foldr (x: y: if pred x then y else false) true); - /* Count how many times function `pred' returns true for the elements - of `list'. + /* Count how many elements of `list` match the supplied predicate + function. + + Type: count :: (a -> bool) -> [a] -> int Example: count (x: x == 3) [ 3 2 3 4 6 ] => 2 */ - count = pred: foldl' (c: x: if pred x then c + 1 else c) 0; + count = + # Predicate + pred: foldl' (c: x: if pred x then c + 1 else c) 0; /* Return a singleton list or an empty list, depending on a boolean value. Useful when building lists with optional elements (e.g. `++ optional (system == "i686-linux") flashplayer'). + Type: optional :: bool -> a -> [a] + Example: optional true "foo" => [ "foo" ] @@ -200,13 +242,19 @@ rec { /* Return a list or an empty list, depending on a boolean value. + Type: optionals :: bool -> [a] -> [a] + Example: optionals true [ 2 3 ] => [ 2 3 ] optionals false [ 2 3 ] => [ ] */ - optionals = cond: elems: if cond then elems else []; + optionals = + # Condition + cond: + # List to return if condition is true + elems: if cond then elems else []; /* If argument is a list, return it; else, wrap it in a singleton @@ -223,20 +271,28 @@ rec { /* Return a list of integers from `first' up to and including `last'. + Type: range :: int -> int -> [int] + Example: range 2 4 => [ 2 3 4 ] range 3 2 => [ ] */ - range = first: last: + range = + # First integer in the range + first: + # Last integer in the range + last: if first > last then [] else genList (n: first + n) (last - first + 1); - /* Splits the elements of a list in two lists, `right' and - `wrong', depending on the evaluation of a predicate. + /* Splits the elements of a list in two lists, `right` and + `wrong`, depending on the evaluation of a predicate. + + Type: (a -> bool) -> [a] -> { right :: [a], wrong :: [a] } Example: partition (x: x > 2) [ 5 1 2 3 4 ] @@ -252,7 +308,7 @@ rec { /* Splits the elements of a list into many lists, using the return value of a predicate. Predicate should return a string which becomes keys of attrset `groupBy' returns. - `groupBy'' allows to customise the combining function and initial value + `groupBy'` allows to customise the combining function and initial value Example: groupBy (x: boolToString (x > 2)) [ 5 1 2 3 4 ] @@ -268,10 +324,6 @@ rec { xfce = [ { name = "xfce"; script = "xfce4-session &"; } ]; } - - groupBy' allows to customise the combining function and initial value - - Example: groupBy' builtins.add 0 (x: boolToString (x > 2)) [ 5 1 2 3 4 ] => { true = 12; false = 3; } */ @@ -289,17 +341,27 @@ rec { the merging stops at the shortest. How both lists are merged is defined by the first argument. + Type: zipListsWith :: (a -> b -> c) -> [a] -> [b] -> [c] + Example: zipListsWith (a: b: a + b) ["h" "l"] ["e" "o"] => ["he" "lo"] */ - zipListsWith = f: fst: snd: + zipListsWith = + # Function to zip elements of both lists + f: + # First list + fst: + # Second list + snd: genList (n: f (elemAt fst n) (elemAt snd n)) (min (length fst) (length snd)); /* Merges two lists of the same size together. If the sizes aren't the same the merging stops at the shortest. + Type: zipLists :: [a] -> [b] -> [{ fst :: a, snd :: b}] + Example: zipLists [ 1 2 ] [ "a" "b" ] => [ { fst = 1; snd = "a"; } { fst = 2; snd = "b"; } ] @@ -308,6 +370,8 @@ rec { /* Reverse the order of the elements of a list. + Type: reverseList :: [a] -> [a] + Example: reverseList [ "b" "o" "j" ] @@ -321,8 +385,7 @@ rec { `before a b == true` means that `b` depends on `a` (there's an edge from `b` to `a`). - Examples: - + Example: listDfs true hasPrefix [ "/home/user" "other" "/" "/home" ] == { minimal = "/"; # minimal element visited = [ "/home/user" ]; # seen elements (in reverse order) @@ -336,7 +399,6 @@ rec { rest = [ "/home" "other" ]; # everything else */ - listDfs = stopOnCycles: before: list: let dfs' = us: visited: rest: @@ -361,7 +423,7 @@ rec { `before a b == true` means that `b` should be after `a` in the result. - Examples: + Example: toposort hasPrefix [ "/home/user" "other" "/" "/home" ] == { result = [ "/" "/home" "/home/user" "other" ]; } @@ -376,7 +438,6 @@ rec { toposort (a: b: a < b) [ 3 2 1 ] == { result = [ 1 2 3 ]; } */ - toposort = before: list: let dfsthis = listDfs true before list; @@ -467,26 +528,38 @@ rec { /* Return the first (at most) N elements of a list. + Type: take :: int -> [a] -> [a] + Example: take 2 [ "a" "b" "c" "d" ] => [ "a" "b" ] take 2 [ ] => [ ] */ - take = count: sublist 0 count; + take = + # Number of elements to take + count: sublist 0 count; /* Remove the first (at most) N elements of a list. + Type: drop :: int -> [a] -> [a] + Example: drop 2 [ "a" "b" "c" "d" ] => [ "c" "d" ] drop 2 [ ] => [ ] */ - drop = count: list: sublist count (length list) list; + drop = + # Number of elements to drop + count: + # Input list + list: sublist count (length list) list; + + /* Return a list consisting of at most `count` elements of `list`, + starting at index `start`. - /* Return a list consisting of at most ‘count’ elements of ‘list’, - starting at index ‘start’. + Type: sublist :: int -> int -> [a] -> [a] Example: sublist 1 3 [ "a" "b" "c" "d" "e" ] @@ -494,7 +567,13 @@ rec { sublist 1 3 [ ] => [ ] */ - sublist = start: count: list: + sublist = + # Index at which to start the sublist + start: + # Number of elements to take + count: + # Input list + list: let len = length list; in genList (n: elemAt list (n + start)) @@ -504,6 +583,10 @@ rec { /* Return the last element of a list. + This function throws an error if the list is empty. + + Type: last :: [a] -> a + Example: last [ 1 2 3 ] => 3 @@ -512,7 +595,11 @@ rec { assert lib.assertMsg (list != []) "lists.last: list must not be empty!"; elemAt list (length list - 1); - /* Return all elements but the last + /* Return all elements but the last. + + This function throws an error if the list is empty. + + Type: init :: [a] -> [a] Example: init [ 1 2 3 ] @@ -523,7 +610,7 @@ rec { take (length list - 1) list; - /* return the image of the cross product of some lists by a function + /* Return the image of the cross product of some lists by a function. Example: crossLists (x:y: "${toString x}${toString y}") [[1 2] [3 4]] @@ -534,8 +621,9 @@ rec { /* Remove duplicate elements from the list. O(n^2) complexity. - Example: + Type: unique :: [a] -> [a] + Example: unique [ 3 2 3 4 ] => [ 3 2 4 ] */ diff --git a/lib/options.nix b/lib/options.nix index 0e3421175306..791930eafbd0 100644 --- a/lib/options.nix +++ b/lib/options.nix @@ -8,61 +8,72 @@ with lib.strings; rec { - # Returns true when the given argument is an option - # - # Examples: - # isOption 1 // => false - # isOption (mkOption {}) // => true + /* Returns true when the given argument is an option + + Type: isOption :: a -> bool + + Example: + isOption 1 // => false + isOption (mkOption {}) // => true + */ isOption = lib.isType "option"; - # Creates an Option attribute set. mkOption accepts an attribute set with the following keys: - # - # default: Default value used when no definition is given in the configuration. - # defaultText: Textual representation of the default, for in the manual. - # example: Example value used in the manual. - # description: String describing the option. - # type: Option type, providing type-checking and value merging. - # apply: Function that converts the option value to something else. - # internal: Whether the option is for NixOS developers only. - # visible: Whether the option shows up in the manual. - # readOnly: Whether the option can be set only once - # options: Obsolete, used by types.optionSet. - # - # All keys default to `null` when not given. - # - # Examples: - # mkOption { } // => { _type = "option"; } - # mkOption { defaultText = "foo"; } // => { _type = "option"; defaultText = "foo"; } + /* Creates an Option attribute set. mkOption accepts an attribute set with the following keys: + + All keys default to `null` when not given. + + Example: + mkOption { } // => { _type = "option"; } + mkOption { defaultText = "foo"; } // => { _type = "option"; defaultText = "foo"; } + */ mkOption = - { default ? null # Default value used when no definition is given in the configuration. - , defaultText ? null # Textual representation of the default, for in the manual. - , example ? null # Example value used in the manual. - , description ? null # String describing the option. - , relatedPackages ? null # Related packages used in the manual (see `genRelatedPackages` in ../nixos/doc/manual/default.nix). - , type ? null # Option type, providing type-checking and value merging. - , apply ? null # Function that converts the option value to something else. - , internal ? null # Whether the option is for NixOS developers only. - , visible ? null # Whether the option shows up in the manual. - , readOnly ? null # Whether the option can be set only once - , options ? null # Obsolete, used by types.optionSet. + { + # Default value used when no definition is given in the configuration. + default ? null, + # Textual representation of the default, for the manual. + defaultText ? null, + # Example value used in the manual. + example ? null, + # String describing the option. + description ? null, + # Related packages used in the manual (see `genRelatedPackages` in ../nixos/doc/manual/default.nix). + relatedPackages ? null, + # Option type, providing type-checking and value merging. + type ? null, + # Function that converts the option value to something else. + apply ? null, + # Whether the option is for NixOS developers only. + internal ? null, + # Whether the option shows up in the manual. + visible ? null, + # Whether the option can be set only once + readOnly ? null, + # Obsolete, used by types.optionSet. + options ? null } @ attrs: attrs // { _type = "option"; }; - # Creates a Option attribute set for a boolean value option i.e an option to be toggled on or off: - # - # Examples: - # mkEnableOption "foo" // => { _type = "option"; default = false; description = "Whether to enable foo."; example = true; type = { ... }; } - mkEnableOption = name: mkOption { + /* Creates an Option attribute set for a boolean value option i.e an + option to be toggled on or off: + + Example: + mkEnableOption "foo" + => { _type = "option"; default = false; description = "Whether to enable foo."; example = true; type = { ... }; } + */ + mkEnableOption = + # Name for the created option + name: mkOption { default = false; example = true; description = "Whether to enable ${name}."; type = lib.types.bool; }; - # This option accept anything, but it does not produce any result. This - # is useful for sharing a module across different module sets without - # having to implement similar features as long as the value of the options - # are not expected. + /* This option accepts anything, but it does not produce any result. + + This is useful for sharing a module across different module sets + without having to implement similar features as long as the + values of the options are not accessed. */ mkSinkUndeclaredOptions = attrs: mkOption ({ internal = true; visible = false; @@ -102,18 +113,24 @@ rec { else val) (head defs).value defs; - # Extracts values of all "value" keys of the given list - # - # Examples: - # getValues [ { value = 1; } { value = 2; } ] // => [ 1 2 ] - # getValues [ ] // => [ ] + /* Extracts values of all "value" keys of the given list. + + Type: getValues :: [ { value :: a } ] -> [a] + + Example: + getValues [ { value = 1; } { value = 2; } ] // => [ 1 2 ] + getValues [ ] // => [ ] + */ getValues = map (x: x.value); - # Extracts values of all "file" keys of the given list - # - # Examples: - # getFiles [ { file = "file1"; } { file = "file2"; } ] // => [ "file1" "file2" ] - # getFiles [ ] // => [ ] + /* Extracts values of all "file" keys of the given list + + Type: getFiles :: [ { file :: a } ] -> [a] + + Example: + getFiles [ { file = "file1"; } { file = "file2"; } ] // => [ "file1" "file2" ] + getFiles [ ] // => [ ] + */ getFiles = map (x: x.file); # Generate documentation template from the list of option declaration like @@ -146,10 +163,13 @@ rec { /* This function recursively removes all derivation attributes from - `x' except for the `name' attribute. This is to make the - generation of `options.xml' much more efficient: the XML - representation of derivations is very large (on the order of - megabytes) and is not actually used by the manual generator. */ + `x` except for the `name` attribute. + + This is to make the generation of `options.xml` much more + efficient: the XML representation of derivations is very large + (on the order of megabytes) and is not actually used by the + manual generator. + */ scrubOptionValue = x: if isDerivation x then { type = "derivation"; drvPath = x.name; outPath = x.name; name = x.name; } @@ -158,20 +178,21 @@ rec { else x; - /* For use in the ‘example’ option attribute. It causes the given - text to be included verbatim in documentation. This is necessary - for example values that are not simple values, e.g., - functions. */ + /* For use in the `example` option attribute. It causes the given + text to be included verbatim in documentation. This is necessary + for example values that are not simple values, e.g., functions. + */ literalExample = text: { _type = "literalExample"; inherit text; }; + # Helper functions. - /* Helper functions. */ + /* Convert an option, described as a list of the option parts in to a + safe, human readable version. - # Convert an option, described as a list of the option parts in to a - # safe, human readable version. ie: - # - # (showOption ["foo" "bar" "baz"]) == "foo.bar.baz" - # (showOption ["foo" "bar.baz" "tux"]) == "foo.\"bar.baz\".tux" + Example: + (showOption ["foo" "bar" "baz"]) == "foo.bar.baz" + (showOption ["foo" "bar.baz" "tux"]) == "foo.\"bar.baz\".tux" + */ showOption = parts: let escapeOptionPart = part: let diff --git a/lib/strings.nix b/lib/strings.nix index 99399459bb48..4d7fa1e774d5 100644 --- a/lib/strings.nix +++ b/lib/strings.nix @@ -12,6 +12,8 @@ rec { /* Concatenate a list of strings. + Type: concatStrings :: [string] -> string + Example: concatStrings ["foo" "bar"] => "foobar" @@ -20,15 +22,19 @@ rec { /* Map a function over a list and concatenate the resulting strings. + Type: concatMapStrings :: (a -> string) -> [a] -> string + Example: concatMapStrings (x: "a" + x) ["foo" "bar"] => "afooabar" */ concatMapStrings = f: list: concatStrings (map f list); - /* Like `concatMapStrings' except that the f functions also gets the + /* Like `concatMapStrings` except that the f functions also gets the position as a parameter. + Type: concatImapStrings :: (int -> a -> string) -> [a] -> string + Example: concatImapStrings (pos: x: "${toString pos}-${x}") ["foo" "bar"] => "1-foo2-bar" @@ -37,17 +43,25 @@ rec { /* Place an element between each element of a list + Type: intersperse :: a -> [a] -> [a] + Example: intersperse "/" ["usr" "local" "bin"] => ["usr" "/" "local" "/" "bin"]. */ - intersperse = separator: list: + intersperse = + # Separator to add between elements + separator: + # Input list + list: if list == [] || length list == 1 then list else tail (lib.concatMap (x: [separator x]) list); /* Concatenate a list of strings with a separator between each element + Type: concatStringsSep :: string -> [string] -> string + Example: concatStringsSep "/" ["usr" "local" "bin"] => "usr/local/bin" @@ -55,43 +69,77 @@ rec { concatStringsSep = builtins.concatStringsSep or (separator: list: concatStrings (intersperse separator list)); - /* First maps over the list and then concatenates it. + /* Maps a function over a list of strings and then concatenates the + result with the specified separator interspersed between + elements. + + Type: concatMapStringsSep :: string -> (string -> string) -> [string] -> string Example: concatMapStringsSep "-" (x: toUpper x) ["foo" "bar" "baz"] => "FOO-BAR-BAZ" */ - concatMapStringsSep = sep: f: list: concatStringsSep sep (map f list); + concatMapStringsSep = + # Separator to add between elements + sep: + # Function to map over the list + f: + # List of input strings + list: concatStringsSep sep (map f list); - /* First imaps over the list and then concatenates it. + /* Same as `concatMapStringsSep`, but the mapping function + additionally receives the position of its argument. - Example: + Type: concatMapStringsSep :: string -> (int -> string -> string) -> [string] -> string + Example: concatImapStringsSep "-" (pos: x: toString (x / pos)) [ 6 6 6 ] => "6-3-2" */ - concatImapStringsSep = sep: f: list: concatStringsSep sep (lib.imap1 f list); + concatImapStringsSep = + # Separator to add between elements + sep: + # Function that receives elements and their positions + f: + # List of input strings + list: concatStringsSep sep (lib.imap1 f list); - /* Construct a Unix-style search path consisting of each `subDir" - directory of the given list of packages. + /* Construct a Unix-style, colon-separated search path consisting of + the given `subDir` appended to each of the given paths. + + Type: makeSearchPath :: string -> [string] -> string Example: makeSearchPath "bin" ["/root" "/usr" "/usr/local"] => "/root/bin:/usr/bin:/usr/local/bin" - makeSearchPath "bin" ["/"] - => "//bin" + makeSearchPath "bin" [""] + => "/bin" */ - makeSearchPath = subDir: packages: - concatStringsSep ":" (map (path: path + "/" + subDir) (builtins.filter (x: x != null) packages)); + makeSearchPath = + # Directory name to append + subDir: + # List of base paths + paths: + concatStringsSep ":" (map (path: path + "/" + subDir) (builtins.filter (x: x != null) paths)); + + /* Construct a Unix-style search path by appending the given + `subDir` to the specified `output` of each of the packages. If no + output by the given name is found, fallback to `.out` and then to + the default. - /* Construct a Unix-style search path, using given package output. - If no output is found, fallback to `.out` and then to the default. + Type: string -> string -> [package] -> string Example: makeSearchPathOutput "dev" "bin" [ pkgs.openssl pkgs.zlib ] => "/nix/store/9rz8gxhzf8sw4kf2j2f1grr49w8zx5vj-openssl-1.0.1r-dev/bin:/nix/store/wwh7mhwh269sfjkm6k5665b5kgp7jrk2-zlib-1.2.8/bin" */ - makeSearchPathOutput = output: subDir: pkgs: makeSearchPath subDir (map (lib.getOutput output) pkgs); + makeSearchPathOutput = + # Package output to use + output: + # Directory name to append + subDir: + # List of packages + pkgs: makeSearchPath subDir (map (lib.getOutput output) pkgs); /* Construct a library search path (such as RPATH) containing the libraries for a set of packages @@ -117,13 +165,12 @@ rec { /* Construct a perl search path (such as $PERL5LIB) - FIXME(zimbatm): this should be moved in perl-specific code - Example: pkgs = import <nixpkgs> { } makePerlPath [ pkgs.perlPackages.libnet ] => "/nix/store/n0m1fk9c960d8wlrs62sncnadygqqc6y-perl-Net-SMTP-1.25/lib/perl5/site_perl" */ + # FIXME(zimbatm): this should be moved in perl-specific code makePerlPath = makeSearchPathOutput "lib" "lib/perl5/site_perl"; /* Construct a perl search path recursively including all dependencies (such as $PERL5LIB) @@ -138,34 +185,51 @@ rec { /* Depending on the boolean `cond', return either the given string or the empty string. Useful to concatenate against a bigger string. + Type: optionalString :: bool -> string -> string + Example: optionalString true "some-string" => "some-string" optionalString false "some-string" => "" */ - optionalString = cond: string: if cond then string else ""; + optionalString = + # Condition + cond: + # String to return if condition is true + string: if cond then string else ""; /* Determine whether a string has given prefix. + Type: hasPrefix :: string -> string -> bool + Example: hasPrefix "foo" "foobar" => true hasPrefix "foo" "barfoo" => false */ - hasPrefix = pref: str: - substring 0 (stringLength pref) str == pref; + hasPrefix = + # Prefix to check for + pref: + # Input string + str: substring 0 (stringLength pref) str == pref; /* Determine whether a string has given suffix. + Type: hasSuffix :: string -> string -> bool + Example: hasSuffix "foo" "foobar" => false hasSuffix "foo" "barfoo" => true */ - hasSuffix = suffix: content: + hasSuffix = + # Suffix to check for + suffix: + # Input string + content: let lenContent = stringLength content; lenSuffix = stringLength suffix; @@ -180,6 +244,8 @@ rec { Also note that Nix treats strings as a list of bytes and thus doesn't handle unicode. + Type: stringtoCharacters :: string -> [string] + Example: stringToCharacters "" => [ ] @@ -194,18 +260,25 @@ rec { /* Manipulate a string character by character and replace them by strings before concatenating the results. + Type: stringAsChars :: (string -> string) -> string -> string + Example: stringAsChars (x: if x == "a" then "i" else x) "nax" => "nix" */ - stringAsChars = f: s: - concatStrings ( + stringAsChars = + # Function to map over each individual character + f: + # Input string + s: concatStrings ( map f (stringToCharacters s) ); - /* Escape occurrence of the elements of ‘list’ in ‘string’ by + /* Escape occurrence of the elements of `list` in `string` by prefixing it with a backslash. + Type: escape :: [string] -> string -> string + Example: escape ["(" ")"] "(foo)" => "\\(foo\\)" @@ -214,6 +287,8 @@ rec { /* Quote string to be used safely within the Bourne shell. + Type: escapeShellArg :: string -> string + Example: escapeShellArg "esc'ape\nme" => "'esc'\\''ape\nme'" @@ -222,6 +297,8 @@ rec { /* Quote all arguments to be safely passed to the Bourne shell. + Type: escapeShellArgs :: [string] -> string + Example: escapeShellArgs ["one" "two three" "four'five"] => "'one' 'two three' 'four'\\''five'" @@ -230,13 +307,15 @@ rec { /* Turn a string into a Nix expression representing that string + Type: string -> string + Example: escapeNixString "hello\${}\n" => "\"hello\\\${}\\n\"" */ escapeNixString = s: escape ["$"] (builtins.toJSON s); - /* Obsolete - use replaceStrings instead. */ + # Obsolete - use replaceStrings instead. replaceChars = builtins.replaceStrings or ( del: new: s: let @@ -256,6 +335,8 @@ rec { /* Converts an ASCII string to lower-case. + Type: toLower :: string -> string + Example: toLower "HOME" => "home" @@ -264,6 +345,8 @@ rec { /* Converts an ASCII string to upper-case. + Type: toUpper :: string -> string + Example: toUpper "home" => "HOME" @@ -273,7 +356,7 @@ rec { /* Appends string context from another string. This is an implementation detail of Nix. - Strings in Nix carry an invisible `context' which is a list of strings + Strings in Nix carry an invisible `context` which is a list of strings representing store paths. If the string is later used in a derivation attribute, the derivation will properly populate the inputDrvs and inputSrcs. @@ -319,8 +402,9 @@ rec { in recurse 0 0; - /* Return the suffix of the second argument if the first argument matches - its prefix. + /* Return a string without the specified prefix, if the prefix matches. + + Type: string -> string -> string Example: removePrefix "foo." "foo.bar.baz" @@ -328,18 +412,23 @@ rec { removePrefix "xxx" "foo.bar.baz" => "foo.bar.baz" */ - removePrefix = pre: s: + removePrefix = + # Prefix to remove if it matches + prefix: + # Input string + str: let - preLen = stringLength pre; - sLen = stringLength s; + preLen = stringLength prefix; + sLen = stringLength str; in - if hasPrefix pre s then - substring preLen (sLen - preLen) s + if hasPrefix prefix str then + substring preLen (sLen - preLen) str else - s; + str; + + /* Return a string without the specified suffix, if the suffix matches. - /* Return the prefix of the second argument if the first argument matches - its suffix. + Type: string -> string -> string Example: removeSuffix "front" "homefront" @@ -347,17 +436,21 @@ rec { removeSuffix "xxx" "homefront" => "homefront" */ - removeSuffix = suf: s: + removeSuffix = + # Suffix to remove if it matches + suffix: + # Input string + str: let - sufLen = stringLength suf; - sLen = stringLength s; + sufLen = stringLength suffix; + sLen = stringLength str; in - if sufLen <= sLen && suf == substring (sLen - sufLen) sufLen s then - substring 0 (sLen - sufLen) s + if sufLen <= sLen && suffix == substring (sLen - sufLen) sufLen str then + substring 0 (sLen - sufLen) str else - s; + str; - /* Return true iff string v1 denotes a version older than v2. + /* Return true if string v1 denotes a version older than v2. Example: versionOlder "1.1" "1.2" @@ -367,7 +460,7 @@ rec { */ versionOlder = v1: v2: builtins.compareVersions v2 v1 == 1; - /* Return true iff string v1 denotes a version equal to or newer than v2. + /* Return true if string v1 denotes a version equal to or newer than v2. Example: versionAtLeast "1.1" "1.0" @@ -459,6 +552,11 @@ rec { /* Create a fixed width string with additional prefix to match required width. + This function will fail if the input string is longer than the + requested length. + + Type: fixedWidthString :: int -> string -> string + Example: fixedWidthString 5 "0" (toString 15) => "00015" @@ -509,8 +607,9 @@ rec { else false; - /* Convert string to int - Obviously, it is a bit hacky to use fromJSON that way. + /* Parse a string string as an int. + + Type: string -> int Example: toInt "1337" @@ -520,17 +619,18 @@ rec { toInt "3.14" => error: floating point JSON numbers are not supported */ + # Obviously, it is a bit hacky to use fromJSON this way. toInt = str: let may_be_int = builtins.fromJSON str; in if builtins.isInt may_be_int then may_be_int else throw "Could not convert ${str} to int."; - /* Read a list of paths from `file', relative to the `rootPath'. Lines - beginning with `#' are treated as comments and ignored. Whitespace - is significant. + /* Read a list of paths from `file`, relative to the `rootPath`. + Lines beginning with `#` are treated as comments and ignored. + Whitespace is significant. - NOTE: this function is not performant and should be avoided + NOTE: This function is not performant and should be avoided. Example: readPathsFromFile /prefix @@ -552,6 +652,8 @@ rec { /* Read the contents of a file removing the trailing \n + Type: fileContents :: path -> string + Example: $ echo "1.0" > ./version diff --git a/lib/systems/default.nix b/lib/systems/default.nix index 8f5ef44ae72f..0b3475fefb9c 100644 --- a/lib/systems/default.nix +++ b/lib/systems/default.nix @@ -32,6 +32,7 @@ rec { else if final.isUClibc then "uclibc" else if final.isAndroid then "bionic" else if final.isLinux /* default */ then "glibc" + else if final.isAvr then "avrlibc" # TODO(@Ericson2314) think more about other operating systems else "native/impure"; extensions = { diff --git a/lib/systems/examples.nix b/lib/systems/examples.nix index 8ba03a63fd8d..a40c38924245 100644 --- a/lib/systems/examples.nix +++ b/lib/systems/examples.nix @@ -99,6 +99,34 @@ rec { riscv64 = riscv "64"; riscv32 = riscv "32"; + avr = { + config = "avr"; + }; + + arm-embedded = { + config = "arm-none-eabi"; + libc = "newlib"; + }; + + aarch64-embedded = { + config = "aarch64-none-elf"; + libc = "newlib"; + }; + + ppc-embedded = { + config = "powerpc-none-eabi"; + libc = "newlib"; + }; + + i686-embedded = { + config = "i686-elf"; + libc = "newlib"; + }; + + x86_64-embedded = { + config = "x86_64-elf"; + libc = "newlib"; + }; # # Darwin diff --git a/lib/systems/inspect.nix b/lib/systems/inspect.nix index 65f560328af5..2fcf1afe4628 100644 --- a/lib/systems/inspect.nix +++ b/lib/systems/inspect.nix @@ -19,6 +19,7 @@ rec { isRiscV = { cpu = { family = "riscv"; }; }; isSparc = { cpu = { family = "sparc"; }; }; isWasm = { cpu = { family = "wasm"; }; }; + isAvr = { cpu = { family = "avr"; }; }; is32bit = { cpu = { bits = 32; }; }; is64bit = { cpu = { bits = 64; }; }; diff --git a/lib/systems/parse.nix b/lib/systems/parse.nix index bb26c93f3d7a..db97a5c4b33b 100644 --- a/lib/systems/parse.nix +++ b/lib/systems/parse.nix @@ -101,6 +101,8 @@ rec { wasm32 = { bits = 32; significantByte = littleEndian; family = "wasm"; }; wasm64 = { bits = 64; significantByte = littleEndian; family = "wasm"; }; + + avr = { bits = 8; family = "avr"; }; }; ################################################################################ @@ -117,6 +119,7 @@ rec { apple = {}; pc = {}; + none = {}; unknown = {}; }; @@ -200,6 +203,7 @@ rec { cygnus = {}; msvc = {}; eabi = {}; + elf = {}; androideabi = {}; android = { @@ -255,9 +259,16 @@ rec { setType "system" components; mkSkeletonFromList = l: { + "1" = if elemAt l 0 == "avr" + then { cpu = elemAt l 0; kernel = "none"; abi = "unknown"; } + else throw "Target specification with 1 components is ambiguous"; "2" = # We only do 2-part hacks for things Nix already supports if elemAt l 1 == "cygwin" then { cpu = elemAt l 0; kernel = "windows"; abi = "cygnus"; } + else if (elemAt l 1 == "eabi") + then { cpu = elemAt l 0; vendor = "none"; kernel = "none"; abi = elemAt l 1; } + else if (elemAt l 1 == "elf") + then { cpu = elemAt l 0; vendor = "none"; kernel = "none"; abi = elemAt l 1; } else { cpu = elemAt l 0; kernel = elemAt l 1; }; "3" = # Awkwards hacks, beware! if elemAt l 1 == "apple" @@ -268,6 +279,10 @@ rec { then { cpu = elemAt l 0; vendor = elemAt l 1; kernel = "windows"; abi = "gnu"; } else if hasPrefix "netbsd" (elemAt l 2) then { cpu = elemAt l 0; vendor = elemAt l 1; kernel = elemAt l 2; } + else if (elemAt l 2 == "eabi") + then { cpu = elemAt l 0; vendor = elemAt l 1; kernel = "none"; abi = elemAt l 2; } + else if (elemAt l 2 == "elf") + then { cpu = elemAt l 0; vendor = elemAt l 1; kernel = "none"; abi = elemAt l 2; } else throw "Target specification with 3 components is ambiguous"; "4" = { cpu = elemAt l 0; vendor = elemAt l 1; kernel = elemAt l 2; abi = elemAt l 3; }; }.${toString (length l)} diff --git a/lib/systems/platforms.nix b/lib/systems/platforms.nix index 56783d99e3d4..1ed072e94645 100644 --- a/lib/systems/platforms.nix +++ b/lib/systems/platforms.nix @@ -471,6 +471,7 @@ rec { "x86_64-linux" = pc64; "armv5tel-linux" = sheevaplug; "armv6l-linux" = raspberrypi; + "armv7a-linux" = armv7l-hf-multiplatform; "armv7l-linux" = armv7l-hf-multiplatform; "aarch64-linux" = aarch64-multiplatform; "mipsel-linux" = fuloong2f_n32; diff --git a/lib/trivial.nix b/lib/trivial.nix index 938df6ced476..e31cf73d27c4 100644 --- a/lib/trivial.nix +++ b/lib/trivial.nix @@ -9,23 +9,37 @@ rec { Type: id :: a -> a */ - id = x: x; + id = + # The value to return + x: x; /* The constant function - Ignores the second argument. - Or: Construct a function that always returns a static value. + + Ignores the second argument. If called with only one argument, + constructs a function that always returns a static value. Type: const :: a -> b -> a Example: let f = const 5; in f 10 => 5 */ - const = x: y: x; + const = + # Value to return + x: + # Value to ignore + y: x; ## Named versions corresponding to some builtin operators. - /* Concatenate two lists */ + /* Concatenate two lists + + Type: concat :: [a] -> [a] -> [a] + + Example: + concat [ 1 2 ] [ 3 4 ] + => [ 1 2 3 4 ] + */ concat = x: y: x ++ y; /* boolean “or” */ @@ -53,27 +67,40 @@ rec { bitNot = builtins.sub (-1); /* Convert a boolean to a string. - Note that toString on a bool returns "1" and "". + + This function uses the strings "true" and "false" to represent + boolean values. Calling `toString` on a bool instead returns "1" + and "" (sic!). + + Type: boolToString :: bool -> string */ boolToString = b: if b then "true" else "false"; /* Merge two attribute sets shallowly, right side trumps left + mergeAttrs :: attrs -> attrs -> attrs + Example: mergeAttrs { a = 1; b = 2; } { b = 3; c = 4; } => { a = 1; b = 3; c = 4; } */ - mergeAttrs = x: y: x // y; + mergeAttrs = + # Left attribute set + x: + # Right attribute set (higher precedence for equal keys) + y: x // y; /* Flip the order of the arguments of a binary function. + Type: flip :: (a -> b -> c) -> (b -> a -> c) + Example: flip concat [1] [2] => [ 2 1 ] */ flip = f: a: b: f b a; - /* Apply function if argument is non-null. + /* Apply function if the supplied argument is non-null. Example: mapNullable (x: x+1) null @@ -81,7 +108,11 @@ rec { mapNullable (x: x+1) 22 => 23 */ - mapNullable = f: a: if isNull a then a else f a; + mapNullable = + # Function to call + f: + # Argument to check for null before passing it to `f` + a: if isNull a then a else f a; # Pull in some builtins not included elsewhere. inherit (builtins) @@ -92,21 +123,27 @@ rec { ## nixpks version strings - # The current full nixpkgs version number. + /* Returns the current full nixpkgs version number. */ version = release + versionSuffix; - # The current nixpkgs version number as string. + /* Returns the current nixpkgs release number as string. */ release = lib.strings.fileContents ../.version; - # The current nixpkgs version suffix as string. + /* Returns the current nixpkgs version suffix as string. */ versionSuffix = let suffixFile = ../.version-suffix; in if pathExists suffixFile then lib.strings.fileContents suffixFile else "pre-git"; - # Attempt to get the revision nixpkgs is from - revisionWithDefault = default: + /* Attempts to return the the current revision of nixpkgs and + returns the supplied default value otherwise. + + Type: revisionWithDefault :: string -> string + */ + revisionWithDefault = + # Default value to return if revision can not be determined + default: let revisionFile = "${toString ./..}/.git-revision"; gitRepo = "${toString ./..}/.git"; @@ -117,14 +154,20 @@ rec { nixpkgsVersion = builtins.trace "`lib.nixpkgsVersion` is deprecated, use `lib.version` instead!" version; - # Whether we're being called by nix-shell. + /* Determine whether the function is being called from inside a Nix + shell. + + Type: inNixShell :: bool + */ inNixShell = builtins.getEnv "IN_NIX_SHELL" != ""; ## Integer operations - # Return minimum/maximum of two numbers. + /* Return minimum of two numbers. */ min = x: y: if x < y then x else y; + + /* Return maximum of two numbers. */ max = x: y: if x > y then x else y; /* Integer modulus @@ -158,8 +201,9 @@ rec { second subtype, compare elements of a single subtype with `yes` and `no` respectively. - Example: + Type: (a -> bool) -> (a -> a -> int) -> (a -> a -> int) -> (a -> a -> int) + Example: let cmp = splitByAndCompare (hasPrefix "foo") compare compare; in cmp "a" "z" => -1 @@ -170,31 +214,44 @@ rec { # while compare "fooa" "a" => 1 */ - splitByAndCompare = p: yes: no: a: b: + splitByAndCompare = + # Predicate + p: + # Comparison function if predicate holds for both values + yes: + # Comparison function if predicate holds for neither value + no: + # First value to compare + a: + # Second value to compare + b: if p a then if p b then yes a b else -1 else if p b then 1 else no a b; - /* Reads a JSON file. */ + /* Reads a JSON file. + + Type :: path -> any + */ importJSON = path: builtins.fromJSON (builtins.readFile path); ## Warnings - /* See https://github.com/NixOS/nix/issues/749. Eventually we'd like these - to expand to Nix builtins that carry metadata so that Nix can filter out - the INFO messages without parsing the message string. + # See https://github.com/NixOS/nix/issues/749. Eventually we'd like these + # to expand to Nix builtins that carry metadata so that Nix can filter out + # the INFO messages without parsing the message string. + # + # Usage: + # { + # foo = lib.warn "foo is deprecated" oldFoo; + # } + # + # TODO: figure out a clever way to integrate location information from + # something like __unsafeGetAttrPos. - Usage: - { - foo = lib.warn "foo is deprecated" oldFoo; - } - - TODO: figure out a clever way to integrate location information from - something like __unsafeGetAttrPos. - */ warn = msg: builtins.trace "WARNING: ${msg}"; info = msg: builtins.trace "INFO: ${msg}"; diff --git a/maintainers/maintainer-list.nix b/maintainers/maintainer-list.nix index b6add449b9bf..60354432ad9b 100644 --- a/maintainers/maintainer-list.nix +++ b/maintainers/maintainer-list.nix @@ -143,6 +143,11 @@ github = "ahmedtd"; name = "Taahir Ahmed"; }; + ahuzik = { + email = "ales.guzik@gmail.com"; + github = "alesguzik"; + name = "Ales Huzik"; + }; aij = { email = "aij+git@mrph.org"; github = "aij"; @@ -401,6 +406,11 @@ github = "AveryLychee"; name = "Avery Lychee"; }; + averelld = { + email = "averell+nixos@rxd4.com"; + github = "averelld"; + name = "averelld"; + }; avnik = { email = "avn@avnik.info"; github = "avnik"; @@ -495,6 +505,11 @@ github = "bennofs"; name = "Benno Fünfstück"; }; + benpye = { + email = "ben@curlybracket.co.uk"; + github = "benpye"; + name = "Ben Pye"; + }; benwbooth = { email = "benwbooth@gmail.com"; github = "benwbooth"; @@ -3900,6 +3915,11 @@ github = "sjagoe"; name = "Simon Jagoe"; }; + sjau = { + email = "nixos@sjau.ch"; + github = "sjau"; + name = "Stephan Jau"; + }; sjmackenzie = { email = "setori88@gmail.com"; github = "sjmackenzie"; @@ -4148,6 +4168,11 @@ github = "taku0"; name = "Takuo Yonezawa"; }; + talyz = { + email = "kim.lindberger@gmail.com"; + github = "talyz"; + name = "Kim Lindberger"; + }; tari = { email = "peter@taricorp.net"; github = "tari"; diff --git a/nixos/doc/manual/administration/declarative-containers.xml b/nixos/doc/manual/administration/declarative-containers.xml index 2a98fb126231..d03dbc4d7055 100644 --- a/nixos/doc/manual/administration/declarative-containers.xml +++ b/nixos/doc/manual/administration/declarative-containers.xml @@ -15,7 +15,7 @@ containers.database = { config = { config, pkgs, ... }: { <xref linkend="opt-services.postgresql.enable"/> = true; - <xref linkend="opt-services.postgresql.package"/> = pkgs.postgresql96; + <xref linkend="opt-services.postgresql.package"/> = pkgs.postgresql_9_6; }; }; </programlisting> diff --git a/nixos/doc/manual/configuration/config-file.xml b/nixos/doc/manual/configuration/config-file.xml index 8a1a39c98c10..c77cfe137baa 100644 --- a/nixos/doc/manual/configuration/config-file.xml +++ b/nixos/doc/manual/configuration/config-file.xml @@ -197,10 +197,10 @@ swapDevices = [ { device = "/dev/disk/by-label/swap"; } ]; pkgs.emacs ]; -<xref linkend="opt-services.postgresql.package"/> = pkgs.postgresql90; +<xref linkend="opt-services.postgresql.package"/> = pkgs.postgresql_10; </programlisting> The latter option definition changes the default PostgreSQL package used - by NixOS’s PostgreSQL service to 9.0. For more information on packages, + by NixOS’s PostgreSQL service to 10.x. For more information on packages, including how to add new ones, see <xref linkend="sec-custom-packages"/>. </para> </listitem> diff --git a/nixos/doc/manual/configuration/firewall.xml b/nixos/doc/manual/configuration/firewall.xml index b66adcedce6e..47a19ac82c0f 100644 --- a/nixos/doc/manual/configuration/firewall.xml +++ b/nixos/doc/manual/configuration/firewall.xml @@ -34,13 +34,4 @@ Similarly, UDP port ranges can be opened through <xref linkend="opt-networking.firewall.allowedUDPPortRanges"/>. </para> - - <para> - Also of interest is -<programlisting> -<xref linkend="opt-networking.firewall.allowPing"/> = true; -</programlisting> - to allow the machine to respond to ping requests. (ICMPv6 pings are always - allowed.) - </para> </section> diff --git a/nixos/doc/manual/release-notes/rl-1809.xml b/nixos/doc/manual/release-notes/rl-1809.xml index 0ddf40acbfcc..8715a05f508b 100644 --- a/nixos/doc/manual/release-notes/rl-1809.xml +++ b/nixos/doc/manual/release-notes/rl-1809.xml @@ -637,6 +637,11 @@ $ nix-instantiate -E '(import <nixpkgsunstable> {}).gitFull' anyways for clarity. </para> </listitem> + <listitem> + <para> + Groups <literal>kvm</literal> and <literal>render</literal> are introduced now, as systemd requires them. + </para> + </listitem> </itemizedlist> </section> diff --git a/nixos/doc/manual/release-notes/rl-1903.xml b/nixos/doc/manual/release-notes/rl-1903.xml index 64ccddb6c672..a3cfa7784996 100644 --- a/nixos/doc/manual/release-notes/rl-1903.xml +++ b/nixos/doc/manual/release-notes/rl-1903.xml @@ -97,6 +97,16 @@ start org.nixos.nix-daemon</command>. </para> </listitem> + <listitem> + <para> + The Syncthing state and configuration data has been moved from + <varname>services.syncthing.dataDir</varname> to the newly defined + <varname>services.syncthing.configDir</varname>, which default to + <literal>/var/lib/syncthing/.config/syncthing</literal>. + This change makes possible to share synced directories using ACLs + without Syncthing resetting the permission on every start. + </para> + </listitem> </itemizedlist> </listitem> <listitem> @@ -145,6 +155,48 @@ format. </para> </listitem> + <listitem> + <para> + The versioned <varname>postgresql</varname> have been renamed to use + underscore number seperators. For example, <varname>postgresql96</varname> + has been renamed to <varname>postgresql_9_6</varname>. + </para> + </listitem> + <listitem> + <para> + Package <literal>consul-ui</literal> and passthrough <literal>consul.ui</literal> have been removed. + The package <literal>consul</literal> now uses upstream releases that vendor the UI into the binary. + See <link xlink:href="https://github.com/NixOS/nixpkgs/pull/48714#issuecomment-433454834">#48714</link> + for details. + </para> + </listitem> + <listitem> + <para> + Slurm introduces the new option + <literal>services.slurm.stateSaveLocation</literal>, + which is now set to <literal>/var/spool/slurm</literal> by default + (instead of <literal>/var/spool</literal>). + Make sure to move all files to the new directory or to set the option accordingly. + </para> + <para> + The slurmctld now runs as user <literal>slurm</literal> instead of <literal>root</literal>. + If you want to keep slurmctld running as <literal>root</literal>, set + <literal>services.slurm.user = root</literal>. + </para> + <para> + The options <literal>services.slurm.nodeName</literal> and + <literal>services.slurm.partitionName</literal> are now sets of + strings to correctly reflect that fact that each of these + options can occour more than once in the configuration. + </para> + </listitem> + <listitem> + <para> + The <literal>solr</literal> package has been upgraded from 4.10.3 to 7.5.0 and has undergone + some major changes. The <literal>services.solr</literal> module has been updated to reflect + these changes. Please review http://lucene.apache.org/solr/ carefully before upgrading. + </para> + </listitem> </itemizedlist> </section> @@ -163,6 +215,28 @@ Matomo version. </para> </listitem> + <listitem> + <para> + The deprecated <literal>truecrypt</literal> package has been removed + and <literal>truecrypt</literal> attribute is now an alias for + <literal>veracrypt</literal>. VeraCrypt is backward-compatible with + TrueCrypt volumes. Note that <literal>cryptsetup</literal> also + supports loading TrueCrypt volumes. + </para> + </listitem> + <listitem> + <para> + The Kubernetes DNS addons, kube-dns, has been replaced with CoreDNS. + This change is made in accordance with Kubernetes making CoreDNS the official default + starting from + <link xlink:href="https://github.com/kubernetes/kubernetes/blob/master/CHANGELOG-1.11.md#sig-cluster-lifecycle">Kubernetes v1.11</link>. + Please beware that upgrading DNS-addon on existing clusters might induce + minor downtime while the DNS-addon terminates and re-initializes. + Also note that the DNS-service now runs with 2 pod replicas by default. + The desired number of replicas can be configured using: + <option>services.kubernetes.addons.dns.replicas</option>. + </para> + </listitem> </itemizedlist> </section> </section> diff --git a/nixos/lib/eval-config.nix b/nixos/lib/eval-config.nix index f71e264c3478..5f05b037bdde 100644 --- a/nixos/lib/eval-config.nix +++ b/nixos/lib/eval-config.nix @@ -53,7 +53,8 @@ in rec { inherit prefix check; modules = modules ++ extraModules ++ baseModules ++ [ pkgsModule ]; args = extraArgs; - specialArgs = { modulesPath = ../modules; } // specialArgs; + specialArgs = + { modulesPath = builtins.toString ../modules; } // specialArgs; }) config options; # These are the extra arguments passed to every module. In diff --git a/nixos/lib/make-channel.nix b/nixos/lib/make-channel.nix index fd805f7f943f..9b920b989fcf 100644 --- a/nixos/lib/make-channel.nix +++ b/nixos/lib/make-channel.nix @@ -1,3 +1,7 @@ +/* Build a channel tarball. These contain, in addition to the nixpkgs + * expressions themselves, files that indicate the version of nixpkgs + * that they represent. + */ { pkgs, nixpkgs, version, versionSuffix }: pkgs.releaseTools.makeSourceTarball { diff --git a/nixos/modules/config/networking.nix b/nixos/modules/config/networking.nix index 1eb6fb43604a..627cce67e97d 100644 --- a/nixos/modules/config/networking.nix +++ b/nixos/modules/config/networking.nix @@ -228,9 +228,6 @@ in # /etc/protocols: IP protocol numbers. "protocols".source = pkgs.iana-etc + "/etc/protocols"; - # /etc/rpc: RPC program numbers. - "rpc".source = pkgs.glibc.out + "/etc/rpc"; - # /etc/hosts: Hostname-to-IP mappings. "hosts".text = let oneToString = set: ip: ip + " " + concatStringsSep " " set.${ip}; @@ -268,6 +265,9 @@ in "resolv.conf".source = "${pkgs.systemd}/lib/systemd/resolv.conf"; } // optionalAttrs (config.services.resolved.enable && dnsmasqResolve) { "dnsmasq-resolv.conf".source = "/run/systemd/resolve/resolv.conf"; + } // optionalAttrs (pkgs.stdenv.hostPlatform.libc == "glibc") { + # /etc/rpc: RPC program numbers. + "rpc".source = pkgs.glibc.out + "/etc/rpc"; }; networking.proxy.envVars = diff --git a/nixos/modules/config/pulseaudio.nix b/nixos/modules/config/pulseaudio.nix index d4aa59506295..67f7105fe2fe 100644 --- a/nixos/modules/config/pulseaudio.nix +++ b/nixos/modules/config/pulseaudio.nix @@ -1,4 +1,4 @@ -{ config, lib, pkgs, pkgs_i686, ... }: +{ config, lib, pkgs, ... }: with pkgs; with lib; @@ -19,7 +19,7 @@ let # Forces 32bit pulseaudio and alsaPlugins to be built/supported for apps # using 32bit alsa on 64bit linux. - enable32BitAlsaPlugins = cfg.support32Bit && stdenv.isx86_64 && (pkgs_i686.alsaLib != null && pkgs_i686.libpulseaudio != null); + enable32BitAlsaPlugins = cfg.support32Bit && stdenv.isx86_64 && (pkgs.pkgsi686Linux.alsaLib != null && pkgs.pkgsi686Linux.libpulseaudio != null); myConfigFile = @@ -63,7 +63,7 @@ let pcm_type.pulse { libs.native = ${pkgs.alsaPlugins}/lib/alsa-lib/libasound_module_pcm_pulse.so ; ${lib.optionalString enable32BitAlsaPlugins - "libs.32Bit = ${pkgs_i686.alsaPlugins}/lib/alsa-lib/libasound_module_pcm_pulse.so ;"} + "libs.32Bit = ${pkgs.pkgsi686Linux.alsaPlugins}/lib/alsa-lib/libasound_module_pcm_pulse.so ;"} } pcm.!default { type pulse @@ -72,7 +72,7 @@ let ctl_type.pulse { libs.native = ${pkgs.alsaPlugins}/lib/alsa-lib/libasound_module_ctl_pulse.so ; ${lib.optionalString enable32BitAlsaPlugins - "libs.32Bit = ${pkgs_i686.alsaPlugins}/lib/alsa-lib/libasound_module_ctl_pulse.so ;"} + "libs.32Bit = ${pkgs.pkgsi686Linux.alsaPlugins}/lib/alsa-lib/libasound_module_ctl_pulse.so ;"} } ctl.!default { type pulse diff --git a/nixos/modules/config/system-path.nix b/nixos/modules/config/system-path.nix index c07e19bd03c4..1793dc628edf 100644 --- a/nixos/modules/config/system-path.nix +++ b/nixos/modules/config/system-path.nix @@ -19,7 +19,9 @@ let pkgs.diffutils pkgs.findutils pkgs.gawk - pkgs.glibc # for ldd, getent + pkgs.stdenv.cc.libc + pkgs.getent + pkgs.getconf pkgs.gnugrep pkgs.gnupatch pkgs.gnused diff --git a/nixos/modules/hardware/opengl.nix b/nixos/modules/hardware/opengl.nix index 46d06d71333a..48e0072e0892 100644 --- a/nixos/modules/hardware/opengl.nix +++ b/nixos/modules/hardware/opengl.nix @@ -1,4 +1,4 @@ -{ config, lib, pkgs, pkgs_i686, ... }: +{ config, lib, pkgs, ... }: with lib; @@ -148,7 +148,7 @@ in [ "/run/opengl-driver/share" ] ++ optional cfg.driSupport32Bit "/run/opengl-driver-32/share"; hardware.opengl.package = mkDefault (makePackage pkgs); - hardware.opengl.package32 = mkDefault (makePackage pkgs_i686); + hardware.opengl.package32 = mkDefault (makePackage pkgs.pkgsi686Linux); boot.extraModulePackages = optional (elem "virtualbox" videoDrivers) kernelPackages.virtualboxGuestAdditions; }; diff --git a/nixos/modules/hardware/video/amdgpu-pro.nix b/nixos/modules/hardware/video/amdgpu-pro.nix index 50af022b93c8..ab9e0c92020e 100644 --- a/nixos/modules/hardware/video/amdgpu-pro.nix +++ b/nixos/modules/hardware/video/amdgpu-pro.nix @@ -1,6 +1,6 @@ # This module provides the proprietary AMDGPU-PRO drivers. -{ config, lib, pkgs, pkgs_i686, ... }: +{ config, lib, pkgs, ... }: with lib; @@ -11,7 +11,7 @@ let enabled = elem "amdgpu-pro" drivers; package = config.boot.kernelPackages.amdgpu-pro; - package32 = pkgs_i686.linuxPackages.amdgpu-pro.override { libsOnly = true; kernel = null; }; + package32 = pkgs.pkgsi686Linux.linuxPackages.amdgpu-pro.override { libsOnly = true; kernel = null; }; opengl = config.hardware.opengl; diff --git a/nixos/modules/hardware/video/ati.nix b/nixos/modules/hardware/video/ati.nix index 2fa37af6ca58..6102919f0155 100644 --- a/nixos/modules/hardware/video/ati.nix +++ b/nixos/modules/hardware/video/ati.nix @@ -1,6 +1,6 @@ # This module provides the proprietary ATI X11 / OpenGL drivers. -{ config, lib, pkgs_i686, ... }: +{ config, lib, pkgs, ... }: with lib; @@ -24,7 +24,7 @@ in { name = "fglrx"; modules = [ ati_x11 ]; libPath = [ "${ati_x11}/lib" ]; }; hardware.opengl.package = ati_x11; - hardware.opengl.package32 = pkgs_i686.linuxPackages.ati_drivers_x11.override { libsOnly = true; kernel = null; }; + hardware.opengl.package32 = pkgs.pkgsi686Linux.linuxPackages.ati_drivers_x11.override { libsOnly = true; kernel = null; }; environment.systemPackages = [ ati_x11 ]; diff --git a/nixos/modules/hardware/video/nvidia.nix b/nixos/modules/hardware/video/nvidia.nix index f8524ab99e8a..21e12395498c 100644 --- a/nixos/modules/hardware/video/nvidia.nix +++ b/nixos/modules/hardware/video/nvidia.nix @@ -1,6 +1,6 @@ # This module provides the proprietary NVIDIA X11 / OpenGL drivers. -{ stdenv, config, lib, pkgs, pkgs_i686, ... }: +{ stdenv, config, lib, pkgs, ... }: with lib; @@ -25,7 +25,7 @@ let nvidia_x11 = nvidiaForKernel config.boot.kernelPackages; nvidia_libs32 = if versionOlder nvidia_x11.version "391" then - ((nvidiaForKernel pkgs_i686.linuxPackages).override { libsOnly = true; kernel = null; }).out + ((nvidiaForKernel pkgs.pkgsi686Linux.linuxPackages).override { libsOnly = true; kernel = null; }).out else (nvidiaForKernel config.boot.kernelPackages).lib32; diff --git a/nixos/modules/installer/virtualbox-demo.nix b/nixos/modules/installer/virtualbox-demo.nix index 8ca3592f3800..2e1b4b3998b5 100644 --- a/nixos/modules/installer/virtualbox-demo.nix +++ b/nixos/modules/installer/virtualbox-demo.nix @@ -22,4 +22,42 @@ with lib; powerManagement.enable = false; system.stateVersion = mkDefault "18.03"; + + installer.cloneConfigExtra = '' + # Let demo build as a trusted user. + # nix.trustedUsers = [ "demo" ]; + + # Mount a VirtualBox shared folder. + # This is configurable in the VirtualBox menu at + # Machine / Settings / Shared Folders. + # fileSystems."/mnt" = { + # fsType = "vboxsf"; + # device = "nameofdevicetomount"; + # options = [ "rw" ]; + # }; + + # By default, the NixOS VirtualBox demo image includes SDDM and Plasma. + # If you prefer another desktop manager or display manager, you may want + # to disable the default. + # services.xserver.desktopManager.plasma5.enable = lib.mkForce false; + # services.xserver.displayManager.sddm.enable = lib.mkForce false; + + # Enable GDM/GNOME by uncommenting above two lines and two lines below. + # services.xserver.displayManager.gdm.enable = true; + # services.xserver.desktopManager.gnome3.enable = true; + + # Set your time zone. + # time.timeZone = "Europe/Amsterdam"; + + # List packages installed in system profile. To search, run: + # \$ nix search wget + # environment.systemPackages = with pkgs; [ + # wget vim + # ]; + + # Enable the OpenSSH daemon. + # services.openssh.enable = true; + + system.stateVersion = mkDefault "18.03"; + ''; } diff --git a/nixos/modules/misc/ids.nix b/nixos/modules/misc/ids.nix index 5c30e512a1b3..6e7f0a007bc2 100644 --- a/nixos/modules/misc/ids.nix +++ b/nixos/modules/misc/ids.nix @@ -331,6 +331,9 @@ zeronet = 304; lirc = 305; lidarr = 306; + slurm = 307; + kapacitor = 308; + solr = 309; # When adding a uid, make sure it doesn't match an existing gid. And don't use uids above 399! @@ -622,6 +625,9 @@ zeronet = 304; lirc = 305; lidarr = 306; + slurm = 307; + kapacitor = 308; + solr = 309; # When adding a gid, make sure it doesn't match an existing # uid. Users and groups with the same name should have equal diff --git a/nixos/modules/misc/nixpkgs.nix b/nixos/modules/misc/nixpkgs.nix index 7f9833e184ab..1dfd2c3c6cf3 100644 --- a/nixos/modules/misc/nixpkgs.nix +++ b/nixos/modules/misc/nixpkgs.nix @@ -208,7 +208,6 @@ in config = { _module.args = { pkgs = cfg.pkgs; - pkgs_i686 = cfg.pkgs.pkgsi686Linux; }; }; } diff --git a/nixos/modules/module-list.nix b/nixos/modules/module-list.nix index 660644eade8d..37e90232da2a 100644 --- a/nixos/modules/module-list.nix +++ b/nixos/modules/module-list.nix @@ -433,6 +433,7 @@ ./services/monitoring/hdaps.nix ./services/monitoring/heapster.nix ./services/monitoring/incron.nix + ./services/monitoring/kapacitor.nix ./services/monitoring/longview.nix ./services/monitoring/monit.nix ./services/monitoring/munin.nix diff --git a/nixos/modules/profiles/clone-config.nix b/nixos/modules/profiles/clone-config.nix index 99d4774584f1..3f669ba7d2e1 100644 --- a/nixos/modules/profiles/clone-config.nix +++ b/nixos/modules/profiles/clone-config.nix @@ -48,6 +48,8 @@ let { imports = [ ${toString config.installer.cloneConfigIncludes} ]; + + ${config.installer.cloneConfigExtra} } ''; @@ -73,6 +75,13 @@ in ''; }; + installer.cloneConfigExtra = mkOption { + default = ""; + description = '' + Extra text to include in the cloned configuration.nix included in this + installer. + ''; + }; }; config = { diff --git a/nixos/modules/profiles/installation-device.nix b/nixos/modules/profiles/installation-device.nix index 370db2b08452..580ea4a58e5b 100644 --- a/nixos/modules/profiles/installation-device.nix +++ b/nixos/modules/profiles/installation-device.nix @@ -63,7 +63,7 @@ with lib; # Tell the Nix evaluator to garbage collect more aggressively. # This is desirable in memory-constrained environments that don't # (yet) have swap set up. - environment.variables.GC_INITIAL_HEAP_SIZE = "100000"; + environment.variables.GC_INITIAL_HEAP_SIZE = "1M"; # Make the installer more likely to succeed in low memory # environments. The kernel's overcommit heustistics bite us diff --git a/nixos/modules/programs/bash/bash.nix b/nixos/modules/programs/bash/bash.nix index 0fbc77ea44cf..d325fff6a572 100644 --- a/nixos/modules/programs/bash/bash.nix +++ b/nixos/modules/programs/bash/bash.nix @@ -16,7 +16,7 @@ let # programmable completion. If we do, enable all modules installed in # the system and user profile in obsolete /etc/bash_completion.d/ # directories. Bash loads completions in all - # $XDG_DATA_DIRS/share/bash-completion/completions/ + # $XDG_DATA_DIRS/bash-completion/completions/ # on demand, so they do not need to be sourced here. if shopt -q progcomp &>/dev/null; then . "${pkgs.bash-completion}/etc/profile.d/bash_completion.sh" diff --git a/nixos/modules/programs/shell.nix b/nixos/modules/programs/shell.nix index 6aa0262e3a4c..9842e2bef643 100644 --- a/nixos/modules/programs/shell.nix +++ b/nixos/modules/programs/shell.nix @@ -13,7 +13,7 @@ with lib; # Set up the per-user profile. mkdir -m 0755 -p "$NIX_USER_PROFILE_DIR" if [ "$(stat --printf '%u' "$NIX_USER_PROFILE_DIR")" != "$(id -u)" ]; then - echo "WARNING: bad ownership on $NIX_USER_PROFILE_DIR, should be $(id -u)" >&2 + echo "WARNING: the per-user profile dir $NIX_USER_PROFILE_DIR should belong to user id $(id -u)" >&2 fi if [ -w "$HOME" ]; then @@ -35,7 +35,7 @@ with lib; NIX_USER_GCROOTS_DIR="/nix/var/nix/gcroots/per-user/$USER" mkdir -m 0755 -p "$NIX_USER_GCROOTS_DIR" if [ "$(stat --printf '%u' "$NIX_USER_GCROOTS_DIR")" != "$(id -u)" ]; then - echo "WARNING: bad ownership on $NIX_USER_GCROOTS_DIR, should be $(id -u)" >&2 + echo "WARNING: the per-user gcroots dir $NIX_USER_GCROOTS_DIR should belong to user id $(id -u)" >&2 fi # Set up a default Nix expression from which to install stuff. diff --git a/nixos/modules/programs/sway-beta.nix b/nixos/modules/programs/sway-beta.nix index 04f2e0662b86..e651ea4cca33 100644 --- a/nixos/modules/programs/sway-beta.nix +++ b/nixos/modules/programs/sway-beta.nix @@ -5,6 +5,15 @@ with lib; let cfg = config.programs.sway-beta; swayPackage = cfg.package; + + swayWrapped = pkgs.writeShellScriptBin "sway" '' + ${cfg.extraSessionCommands} + exec ${pkgs.dbus.dbus-launch} --exit-with-session ${swayPackage}/bin/sway + ''; + swayJoined = pkgs.symlinkJoin { + name = "sway-joined"; + paths = [ swayWrapped swayPackage ]; + }; in { options.programs.sway-beta = { enable = mkEnableOption '' @@ -20,13 +29,30 @@ in { ''; }; + extraSessionCommands = mkOption { + type = types.lines; + default = ""; + example = '' + export SDL_VIDEODRIVER=wayland + # needs qt5.qtwayland in systemPackages + export QT_QPA_PLATFORM=wayland + export QT_WAYLAND_DISABLE_WINDOWDECORATION="1" + # Fix for some Java AWT applications (e.g. Android Studio), + # use this if they aren't displayed properly: + export _JAVA_AWT_WM_NONREPARENTING=1 + ''; + description = '' + Shell commands executed just before Sway is started. + ''; + }; + extraPackages = mkOption { type = with types; listOf package; default = with pkgs; [ - xwayland dmenu + xwayland rxvt_unicode dmenu ]; defaultText = literalExample '' - with pkgs; [ xwayland dmenu ]; + with pkgs; [ xwayland rxvt_unicode dmenu ]; ''; example = literalExample '' with pkgs; [ @@ -42,7 +68,7 @@ in { }; config = mkIf cfg.enable { - environment.systemPackages = [ swayPackage ] ++ cfg.extraPackages; + environment.systemPackages = [ swayJoined ] ++ cfg.extraPackages; security.pam.services.swaylock = {}; hardware.opengl.enable = mkDefault true; fonts.enableDefaultFonts = mkDefault true; @@ -51,4 +77,3 @@ in { meta.maintainers = with lib.maintainers; [ gnidorah primeos colemickens ]; } - diff --git a/nixos/modules/rename.nix b/nixos/modules/rename.nix index eb74b9bcac12..aa2b5c0b2dfb 100644 --- a/nixos/modules/rename.nix +++ b/nixos/modules/rename.nix @@ -28,7 +28,10 @@ with lib; (config: let enabled = getAttrFromPath [ "services" "printing" "gutenprint" ] config; in if enabled then [ pkgs.gutenprint ] else [ ])) - (mkRenamedOptionModule [ "services" "ddclient" "domain" ] [ "services" "ddclient" "domains" ]) + (mkChangedOptionModule [ "services" "ddclient" "domain" ] [ "services" "ddclient" "domains" ] + (config: + let value = getAttrFromPath [ "services" "ddclient" "domain" ] config; + in if value != "" then [ value ] else [])) (mkRemovedOptionModule [ "services" "ddclient" "homeDir" ] "") (mkRenamedOptionModule [ "services" "elasticsearch" "host" ] [ "services" "elasticsearch" "listenAddress" ]) (mkRenamedOptionModule [ "services" "graphite" "api" "host" ] [ "services" "graphite" "api" "listenAddress" ]) diff --git a/nixos/modules/security/apparmor-suid.nix b/nixos/modules/security/apparmor-suid.nix index dfbf5d859ba9..498c2f25d1c0 100644 --- a/nixos/modules/security/apparmor-suid.nix +++ b/nixos/modules/security/apparmor-suid.nix @@ -28,7 +28,7 @@ with lib; capability setuid, network inet raw, - ${pkgs.glibc.out}/lib/*.so mr, + ${pkgs.stdenv.cc.libc.out}/lib/*.so mr, ${pkgs.libcap.lib}/lib/libcap.so* mr, ${pkgs.attr.out}/lib/libattr.so* mr, diff --git a/nixos/modules/security/dhparams.nix b/nixos/modules/security/dhparams.nix index e2b84c3e3b38..62a499ea624d 100644 --- a/nixos/modules/security/dhparams.nix +++ b/nixos/modules/security/dhparams.nix @@ -170,4 +170,6 @@ in { ''; }) cfg.params; }; + + meta.maintainers = with lib.maintainers; [ ekleog ]; } diff --git a/nixos/modules/security/rngd.nix b/nixos/modules/security/rngd.nix index 81e04a44b115..a54ef2e6fcad 100644 --- a/nixos/modules/security/rngd.nix +++ b/nixos/modules/security/rngd.nix @@ -20,7 +20,6 @@ with lib; KERNEL=="random", TAG+="systemd" SUBSYSTEM=="cpu", ENV{MODALIAS}=="cpu:type:x86,*feature:*009E*", TAG+="systemd", ENV{SYSTEMD_WANTS}+="rngd.service" KERNEL=="hw_random", TAG+="systemd", ENV{SYSTEMD_WANTS}+="rngd.service" - ${if config.services.tcsd.enable then "" else ''KERNEL=="tpm0", TAG+="systemd", ENV{SYSTEMD_WANTS}+="rngd.service"''} ''; systemd.services.rngd = { @@ -30,8 +29,7 @@ with lib; description = "Hardware RNG Entropy Gatherer Daemon"; - serviceConfig.ExecStart = "${pkgs.rng-tools}/sbin/rngd -f -v" + - (if config.services.tcsd.enable then " --no-tpm=1" else ""); + serviceConfig.ExecStart = "${pkgs.rng-tools}/sbin/rngd -f"; }; }; } diff --git a/nixos/modules/services/admin/salt/master.nix b/nixos/modules/services/admin/salt/master.nix index 165580b97837..c6b1b0cc0bd8 100644 --- a/nixos/modules/services/admin/salt/master.nix +++ b/nixos/modules/services/admin/salt/master.nix @@ -53,6 +53,9 @@ in Type = "notify"; NotifyAccess = "all"; }; + restartTriggers = [ + config.environment.etc."salt/master".source + ]; }; }; diff --git a/nixos/modules/services/admin/salt/minion.nix b/nixos/modules/services/admin/salt/minion.nix index 9ecefb32cfa8..c8fa9461a209 100644 --- a/nixos/modules/services/admin/salt/minion.nix +++ b/nixos/modules/services/admin/salt/minion.nix @@ -15,7 +15,6 @@ let # Default is in /etc/salt/pki/minion pki_dir = "/var/lib/salt/pki/minion"; } cfg.configuration; - configDir = pkgs.writeTextDir "minion" (builtins.toJSON fullConfig); in @@ -28,15 +27,24 @@ in default = {}; description = '' Salt minion configuration as Nix attribute set. - See <link xlink:href="https://docs.saltstack.com/en/latest/ref/configuration/minion.html"/> - for details. + See <link xlink:href="https://docs.saltstack.com/en/latest/ref/configuration/minion.html"/> + for details. ''; }; }; }; config = mkIf cfg.enable { - environment.systemPackages = with pkgs; [ salt ]; + environment = { + # Set this up in /etc/salt/minion so `salt-call`, etc. work. + # The alternatives are + # - passing --config-dir to all salt commands, not just the minion unit, + # - setting aglobal environment variable. + etc."salt/minion".source = pkgs.writeText "minion" ( + builtins.toJSON fullConfig + ); + systemPackages = with pkgs; [ salt ]; + }; systemd.services.salt-minion = { description = "Salt Minion"; wantedBy = [ "multi-user.target" ]; @@ -45,11 +53,14 @@ in utillinux ]; serviceConfig = { - ExecStart = "${pkgs.salt}/bin/salt-minion --config-dir=${configDir}"; + ExecStart = "${pkgs.salt}/bin/salt-minion"; LimitNOFILE = 8192; Type = "notify"; NotifyAccess = "all"; }; + restartTriggers = [ + config.environment.etc."salt/minion".source + ]; }; }; } diff --git a/nixos/modules/services/cluster/kubernetes/dns.nix b/nixos/modules/services/cluster/kubernetes/dns.nix index 43bbb50a48d4..5a3e281ea694 100644 --- a/nixos/modules/services/cluster/kubernetes/dns.nix +++ b/nixos/modules/services/cluster/kubernetes/dns.nix @@ -3,8 +3,13 @@ with lib; let - version = "1.14.10"; + version = "1.2.5"; cfg = config.services.kubernetes.addons.dns; + ports = { + dns = 10053; + health = 10054; + metrics = 10055; + }; in { options.services.kubernetes.addons.dns = { enable = mkEnableOption "kubernetes dns addon"; @@ -27,49 +32,130 @@ in { type = types.str; }; - kube-dns = mkOption { - description = "Docker image to seed for the kube-dns main container."; - type = types.attrs; - default = { - imageName = "k8s.gcr.io/k8s-dns-kube-dns-amd64"; - imageDigest = "sha256:b99fc3eee2a9f052f7eb4cc00f15eb12fc405fa41019baa2d6b79847ae7284a8"; - finalImageTag = version; - sha256 = "0x583znk9smqn0fix7ld8sm5jgaxhqhx3fq97b1wkqm7iwhvl3pj"; - }; - }; - - dnsmasq-nanny = mkOption { - description = "Docker image to seed for the kube-dns dnsmasq container."; - type = types.attrs; - default = { - imageName = "k8s.gcr.io/k8s-dns-dnsmasq-nanny-amd64"; - imageDigest = "sha256:bbb2a290a568125b3b996028958eb773f33b5b87a6b37bf38a28f8b62dddb3c8"; - finalImageTag = version; - sha256 = "1fihml7s2mfwgac51cbqpylkwbivc8nyhgi4vb820s83zvl8a6y1"; - }; + replicas = mkOption { + description = "Number of DNS pod replicas to deploy in the cluster."; + default = 2; + type = types.int; }; - sidecar = mkOption { - description = "Docker image to seed for the kube-dns sidecar container."; + coredns = mkOption { + description = "Docker image to seed for the CoreDNS container."; type = types.attrs; default = { - imageName = "k8s.gcr.io/k8s-dns-sidecar-amd64"; - imageDigest = "sha256:4f1ab957f87b94a5ec1edc26fae50da2175461f00afecf68940c4aa079bd08a4"; + imageName = "coredns/coredns"; + imageDigest = "sha256:33c8da20b887ae12433ec5c40bfddefbbfa233d5ce11fb067122e68af30291d6"; finalImageTag = version; - sha256 = "08l1bv5jgrhvjzpqpbinrkgvv52snc4fzyd8ya9v18ns2klyz7m0"; + sha256 = "13q19rgwapv27xcs664dw502254yw4zw63insf6g2danidv2mg6i"; }; }; }; config = mkIf cfg.enable { - services.kubernetes.kubelet.seedDockerImages = with pkgs.dockerTools; [ - (pullImage cfg.kube-dns) - (pullImage cfg.dnsmasq-nanny) - (pullImage cfg.sidecar) - ]; + services.kubernetes.kubelet.seedDockerImages = + singleton (pkgs.dockerTools.pullImage cfg.coredns); services.kubernetes.addonManager.addons = { - kubedns-deployment = { + coredns-sa = { + apiVersion = "v1"; + kind = "ServiceAccount"; + metadata = { + labels = { + "addonmanager.kubernetes.io/mode" = "Reconcile"; + "k8s-app" = "kube-dns"; + "kubernetes.io/cluster-service" = "true"; + }; + name = "coredns"; + namespace = "kube-system"; + }; + }; + + coredns-cr = { + apiVersion = "rbac.authorization.k8s.io/v1beta1"; + kind = "ClusterRole"; + metadata = { + labels = { + "addonmanager.kubernetes.io/mode" = "Reconcile"; + "k8s-app" = "kube-dns"; + "kubernetes.io/cluster-service" = "true"; + "kubernetes.io/bootstrapping" = "rbac-defaults"; + }; + name = "system:coredns"; + }; + rules = [ + { + apiGroups = [ "" ]; + resources = [ "endpoints" "services" "pods" "namespaces" ]; + verbs = [ "list" "watch" ]; + } + { + apiGroups = [ "" ]; + resources = [ "nodes" ]; + verbs = [ "get" ]; + } + ]; + }; + + coredns-crb = { + apiVersion = "rbac.authorization.k8s.io/v1beta1"; + kind = "ClusterRoleBinding"; + metadata = { + annotations = { + "rbac.authorization.kubernetes.io/autoupdate" = "true"; + }; + labels = { + "addonmanager.kubernetes.io/mode" = "Reconcile"; + "k8s-app" = "kube-dns"; + "kubernetes.io/cluster-service" = "true"; + "kubernetes.io/bootstrapping" = "rbac-defaults"; + }; + name = "system:coredns"; + }; + roleRef = { + apiGroup = "rbac.authorization.k8s.io"; + kind = "ClusterRole"; + name = "system:coredns"; + }; + subjects = [ + { + kind = "ServiceAccount"; + name = "coredns"; + namespace = "kube-system"; + } + ]; + }; + + coredns-cm = { + apiVersion = "v1"; + kind = "ConfigMap"; + metadata = { + labels = { + "addonmanager.kubernetes.io/mode" = "Reconcile"; + "k8s-app" = "kube-dns"; + "kubernetes.io/cluster-service" = "true"; + }; + name = "coredns"; + namespace = "kube-system"; + }; + data = { + Corefile = ".:${toString ports.dns} { + errors + health :${toString ports.health} + kubernetes ${cfg.clusterDomain} in-addr.arpa ip6.arpa { + pods insecure + upstream + fallthrough in-addr.arpa ip6.arpa + } + prometheus :${toString ports.metrics} + proxy . /etc/resolv.conf + cache 30 + loop + reload + loadbalance + }"; + }; + }; + + coredns-deploy = { apiVersion = "extensions/v1beta1"; kind = "Deployment"; metadata = { @@ -77,183 +163,97 @@ in { "addonmanager.kubernetes.io/mode" = "Reconcile"; "k8s-app" = "kube-dns"; "kubernetes.io/cluster-service" = "true"; + "kubernetes.io/name" = "CoreDNS"; }; - name = "kube-dns"; + name = "coredns"; namespace = "kube-system"; }; spec = { - selector.matchLabels."k8s-app" = "kube-dns"; + replicas = cfg.replicas; + selector = { + matchLabels = { k8s-app = "kube-dns"; }; + }; strategy = { - rollingUpdate = { - maxSurge = "10%"; - maxUnavailable = 0; - }; + rollingUpdate = { maxUnavailable = 1; }; + type = "RollingUpdate"; }; template = { metadata = { - annotations."scheduler.alpha.kubernetes.io/critical-pod" = ""; - labels.k8s-app = "kube-dns"; + labels = { + k8s-app = "kube-dns"; + }; }; spec = { - priorityClassName = "system-cluster-critical"; containers = [ { - name = "kubedns"; - image = with cfg.kube-dns; "${imageName}:${finalImageTag}"; - resources = { - limits.memory = "170Mi"; - requests = { - cpu = "100m"; - memory = "70Mi"; - }; - }; + args = [ "-conf" "/etc/coredns/Corefile" ]; + image = with cfg.coredns; "${imageName}:${finalImageTag}"; + imagePullPolicy = "Never"; livenessProbe = { failureThreshold = 5; httpGet = { - path = "/healthcheck/kubedns"; - port = 10054; + path = "/health"; + port = ports.health; scheme = "HTTP"; }; initialDelaySeconds = 60; successThreshold = 1; timeoutSeconds = 5; }; - readinessProbe = { - httpGet = { - path = "/readiness"; - port = 8081; - scheme = "HTTP"; - }; - initialDelaySeconds = 3; - timeoutSeconds = 5; - }; - args = [ - "--domain=${cfg.clusterDomain}" - "--dns-port=10053" - "--config-dir=/kube-dns-config" - "--v=2" - ]; - env = [ - { - name = "PROMETHEUS_PORT"; - value = "10055"; - } - ]; + name = "coredns"; ports = [ { - containerPort = 10053; - name = "dns-local"; + containerPort = ports.dns; + name = "dns"; protocol = "UDP"; } { - containerPort = 10053; - name = "dns-tcp-local"; + containerPort = ports.dns; + name = "dns-tcp"; protocol = "TCP"; } { - containerPort = 10055; + containerPort = ports.metrics; name = "metrics"; protocol = "TCP"; } ]; - volumeMounts = [ - { - mountPath = "/kube-dns-config"; - name = "kube-dns-config"; - } - ]; - } - { - name = "dnsmasq"; - image = with cfg.dnsmasq-nanny; "${imageName}:${finalImageTag}"; - livenessProbe = { - httpGet = { - path = "/healthcheck/dnsmasq"; - port = 10054; - scheme = "HTTP"; - }; - initialDelaySeconds = 60; - timeoutSeconds = 5; - successThreshold = 1; - failureThreshold = 5; - }; - args = [ - "-v=2" - "-logtostderr" - "-configDir=/etc/k8s/dns/dnsmasq-nanny" - "-restartDnsmasq=true" - "--" - "-k" - "--cache-size=1000" - "--log-facility=-" - "--server=/${cfg.clusterDomain}/127.0.0.1#10053" - "--server=/in-addr.arpa/127.0.0.1#10053" - "--server=/ip6.arpa/127.0.0.1#10053" - ]; - ports = [ - { - containerPort = 53; - name = "dns"; - protocol = "UDP"; - } - { - containerPort = 53; - name = "dns-tcp"; - protocol = "TCP"; - } - ]; resources = { + limits = { + memory = "170Mi"; + }; requests = { - cpu = "150m"; - memory = "20Mi"; + cpu = "100m"; + memory = "70Mi"; }; }; - volumeMounts = [ - { - mountPath = "/etc/k8s/dns/dnsmasq-nanny"; - name = "kube-dns-config"; - } - ]; - } - { - name = "sidecar"; - image = with cfg.sidecar; "${imageName}:${finalImageTag}"; - livenessProbe = { - httpGet = { - path = "/metrics"; - port = 10054; - scheme = "HTTP"; + securityContext = { + allowPrivilegeEscalation = false; + capabilities = { + drop = [ "all" ]; }; - initialDelaySeconds = 60; - timeoutSeconds = 5; - successThreshold = 1; - failureThreshold = 5; + readOnlyRootFilesystem = true; }; - args = [ - "--v=2" - "--logtostderr" - "--probe=kubedns,127.0.0.1:10053,kubernetes.default.svc.${cfg.clusterDomain},5,A" - "--probe=dnsmasq,127.0.0.1:53,kubernetes.default.svc.${cfg.clusterDomain},5,A" - ]; - ports = [ + volumeMounts = [ { - containerPort = 10054; - name = "metrics"; - protocol = "TCP"; + mountPath = "/etc/coredns"; + name = "config-volume"; + readOnly = true; } ]; - resources = { - requests = { - cpu = "10m"; - memory = "20Mi"; - }; - }; } ]; dnsPolicy = "Default"; - serviceAccountName = "kube-dns"; + nodeSelector = { + "beta.kubernetes.io/os" = "linux"; + }; + serviceAccountName = "coredns"; tolerations = [ { + effect = "NoSchedule"; + key = "node-role.kubernetes.io/master"; + } + { key = "CriticalAddonsOnly"; operator = "Exists"; } @@ -261,10 +261,15 @@ in { volumes = [ { configMap = { - name = "kube-dns"; - optional = true; + items = [ + { + key = "Corefile"; + path = "Corefile"; + } + ]; + name = "coredns"; }; - name = "kube-dns-config"; + name = "config-volume"; } ]; }; @@ -272,51 +277,40 @@ in { }; }; - kubedns-svc = { + coredns-svc = { apiVersion = "v1"; kind = "Service"; metadata = { + annotations = { + "prometheus.io/port" = toString ports.metrics; + "prometheus.io/scrape" = "true"; + }; labels = { "addonmanager.kubernetes.io/mode" = "Reconcile"; "k8s-app" = "kube-dns"; "kubernetes.io/cluster-service" = "true"; - "kubernetes.io/name" = "KubeDNS"; + "kubernetes.io/name" = "CoreDNS"; }; name = "kube-dns"; - namespace = "kube-system"; + namespace = "kube-system"; }; spec = { clusterIP = cfg.clusterIp; ports = [ - {name = "dns"; port = 53; protocol = "UDP";} - {name = "dns-tcp"; port = 53; protocol = "TCP";} + { + name = "dns"; + port = 53; + targetPort = ports.dns; + protocol = "UDP"; + } + { + name = "dns-tcp"; + port = 53; + targetPort = ports.dns; + protocol = "TCP"; + } ]; - selector.k8s-app = "kube-dns"; - }; - }; - - kubedns-sa = { - apiVersion = "v1"; - kind = "ServiceAccount"; - metadata = { - name = "kube-dns"; - namespace = "kube-system"; - labels = { - "kubernetes.io/cluster-service" = "true"; - "addonmanager.kubernetes.io/mode" = "Reconcile"; - }; - }; - }; - - kubedns-cm = { - apiVersion = "v1"; - kind = "ConfigMap"; - metadata = { - name = "kube-dns"; - namespace = "kube-system"; - labels = { - "addonmanager.kubernetes.io/mode" = "EnsureExists"; - }; + selector = { k8s-app = "kube-dns"; }; }; }; }; diff --git a/nixos/modules/services/computing/slurm/slurm.nix b/nixos/modules/services/computing/slurm/slurm.nix index 09174ed39f5e..cd481212db2d 100644 --- a/nixos/modules/services/computing/slurm/slurm.nix +++ b/nixos/modules/services/computing/slurm/slurm.nix @@ -6,13 +6,18 @@ let cfg = config.services.slurm; # configuration file can be generated by http://slurm.schedmd.com/configurator.html + + defaultUser = "slurm"; + configFile = pkgs.writeTextDir "slurm.conf" '' ClusterName=${cfg.clusterName} + StateSaveLocation=${cfg.stateSaveLocation} + SlurmUser=${cfg.user} ${optionalString (cfg.controlMachine != null) ''controlMachine=${cfg.controlMachine}''} ${optionalString (cfg.controlAddr != null) ''controlAddr=${cfg.controlAddr}''} - ${optionalString (cfg.nodeName != null) ''nodeName=${cfg.nodeName}''} - ${optionalString (cfg.partitionName != null) ''partitionName=${cfg.partitionName}''} + ${toString (map (x: "NodeName=${x}\n") cfg.nodeName)} + ${toString (map (x: "PartitionName=${x}\n") cfg.partitionName)} PlugStackConfig=${plugStackConfig} ProctrackType=${cfg.procTrackType} ${cfg.extraConfig} @@ -24,12 +29,19 @@ let ${cfg.extraPlugstackConfig} ''; - cgroupConfig = pkgs.writeTextDir "cgroup.conf" '' ${cfg.extraCgroupConfig} ''; + slurmdbdConf = pkgs.writeTextDir "slurmdbd.conf" + '' + DbdHost=${cfg.dbdserver.dbdHost} + SlurmUser=${cfg.user} + StorageType=accounting_storage/mysql + ${cfg.dbdserver.extraConfig} + ''; + # slurm expects some additional config files to be # in the same directory as slurm.conf etcSlurm = pkgs.symlinkJoin { @@ -43,6 +55,8 @@ in ###### interface + meta.maintainers = [ maintainers.markuskowa ]; + options = { services.slurm = { @@ -60,6 +74,27 @@ in }; }; + dbdserver = { + enable = mkEnableOption "SlurmDBD service"; + + dbdHost = mkOption { + type = types.str; + default = config.networking.hostName; + description = '' + Hostname of the machine where <literal>slurmdbd</literal> + is running (i.e. name returned by <literal>hostname -s</literal>). + ''; + }; + + extraConfig = mkOption { + type = types.lines; + default = ""; + description = '' + Extra configuration for <literal>slurmdbd.conf</literal> + ''; + }; + }; + client = { enable = mkEnableOption "slurm client daemon"; }; @@ -116,9 +151,9 @@ in }; nodeName = mkOption { - type = types.nullOr types.str; - default = null; - example = "linux[1-32] CPUs=1 State=UNKNOWN"; + type = types.listOf types.str; + default = []; + example = literalExample ''[ "linux[1-32] CPUs=1 State=UNKNOWN" ];''; description = '' Name that SLURM uses to refer to a node (or base partition for BlueGene systems). Typically this would be the string that "/bin/hostname -s" @@ -127,9 +162,9 @@ in }; partitionName = mkOption { - type = types.nullOr types.str; - default = null; - example = "debug Nodes=linux[1-32] Default=YES MaxTime=INFINITE State=UP"; + type = types.listOf types.str; + default = []; + example = literalExample ''[ "debug Nodes=linux[1-32] Default=YES MaxTime=INFINITE State=UP" ];''; description = '' Name by which the partition may be referenced. Note that now you have to write the partition's parameters after the name. @@ -150,7 +185,7 @@ in }; procTrackType = mkOption { - type = types.string; + type = types.str; default = "proctrack/linuxproc"; description = '' Plugin to be used for process tracking on a job step basis. @@ -159,6 +194,25 @@ in ''; }; + stateSaveLocation = mkOption { + type = types.str; + default = "/var/spool/slurmctld"; + description = '' + Directory into which the Slurm controller, slurmctld, saves its state. + ''; + }; + + user = mkOption { + type = types.str; + default = defaultUser; + description = '' + Set this option when you want to run the slurmctld daemon + as something else than the default slurm user "slurm". + Note that the UID of this user needs to be the same + on all nodes. + ''; + }; + extraConfig = mkOption { default = ""; type = types.lines; @@ -184,6 +238,8 @@ in used when <literal>procTrackType=proctrack/cgroup</literal>. ''; }; + + }; }; @@ -220,12 +276,24 @@ in ''; }; - in mkIf (cfg.enableStools || cfg.client.enable || cfg.server.enable) { + in mkIf ( cfg.enableStools || + cfg.client.enable || + cfg.server.enable || + cfg.dbdserver.enable ) { environment.systemPackages = [ wrappedSlurm ]; services.munge.enable = mkDefault true; + # use a static uid as default to ensure it is the same on all nodes + users.users.slurm = mkIf (cfg.user == defaultUser) { + name = defaultUser; + group = "slurm"; + uid = config.ids.uids.slurm; + }; + + users.groups.slurm.gid = config.ids.uids.slurm; + systemd.services.slurmd = mkIf (cfg.client.enable) { path = with pkgs; [ wrappedSlurm coreutils ] ++ lib.optional cfg.enableSrunX11 slurm-spank-x11; @@ -261,6 +329,29 @@ in PIDFile = "/run/slurmctld.pid"; ExecReload = "${pkgs.coreutils}/bin/kill -HUP $MAINPID"; }; + + preStart = '' + mkdir -p ${cfg.stateSaveLocation} + chown -R ${cfg.user}:slurm ${cfg.stateSaveLocation} + ''; + }; + + systemd.services.slurmdbd = mkIf (cfg.dbdserver.enable) { + path = with pkgs; [ wrappedSlurm munge coreutils ]; + + wantedBy = [ "multi-user.target" ]; + after = [ "network.target" "munged.service" "mysql.service" ]; + requires = [ "munged.service" "mysql.service" ]; + + # slurm strips the last component off the path + environment.SLURM_CONF = "${slurmdbdConf}/slurm.conf"; + + serviceConfig = { + Type = "forking"; + ExecStart = "${cfg.package}/bin/slurmdbd"; + PIDFile = "/run/slurmdbd.pid"; + ExecReload = "${pkgs.coreutils}/bin/kill -HUP $MAINPID"; + }; }; }; diff --git a/nixos/modules/services/databases/postgresql.nix b/nixos/modules/services/databases/postgresql.nix index de2a757196a5..f592be0e768b 100644 --- a/nixos/modules/services/databases/postgresql.nix +++ b/nixos/modules/services/databases/postgresql.nix @@ -55,7 +55,7 @@ in package = mkOption { type = types.package; - example = literalExample "pkgs.postgresql96"; + example = literalExample "pkgs.postgresql_9_6"; description = '' PostgreSQL package to use. ''; @@ -118,7 +118,7 @@ in extraPlugins = mkOption { type = types.listOf types.path; default = []; - example = literalExample "[ (pkgs.postgis.override { postgresql = pkgs.postgresql94; }) ]"; + example = literalExample "[ (pkgs.postgis.override { postgresql = pkgs.postgresql_9_4; }) ]"; description = '' When this list contains elements a new store path is created. PostgreSQL and the elements are symlinked into it. Then pg_config, @@ -167,9 +167,9 @@ in # Note: when changing the default, make it conditional on # ‘system.stateVersion’ to maintain compatibility with existing # systems! - mkDefault (if versionAtLeast config.system.stateVersion "17.09" then pkgs.postgresql96 - else if versionAtLeast config.system.stateVersion "16.03" then pkgs.postgresql95 - else pkgs.postgresql94); + mkDefault (if versionAtLeast config.system.stateVersion "17.09" then pkgs.postgresql_9_6 + else if versionAtLeast config.system.stateVersion "16.03" then pkgs.postgresql_9_5 + else pkgs.postgresql_9_4); services.postgresql.dataDir = mkDefault (if versionAtLeast config.system.stateVersion "17.09" then "/var/lib/postgresql/${config.services.postgresql.package.psqlSchema}" @@ -271,5 +271,5 @@ in }; meta.doc = ./postgresql.xml; - + meta.maintainers = with lib.maintainers; [ thoughtpolice ]; } diff --git a/nixos/modules/services/databases/postgresql.xml b/nixos/modules/services/databases/postgresql.xml index f89f0d653164..14f4d4909bc0 100644 --- a/nixos/modules/services/databases/postgresql.xml +++ b/nixos/modules/services/databases/postgresql.xml @@ -27,12 +27,12 @@ <filename>configuration.nix</filename>: <programlisting> <xref linkend="opt-services.postgresql.enable"/> = true; -<xref linkend="opt-services.postgresql.package"/> = pkgs.postgresql94; +<xref linkend="opt-services.postgresql.package"/> = pkgs.postgresql_9_4; </programlisting> Note that you are required to specify the desired version of PostgreSQL - (e.g. <literal>pkgs.postgresql94</literal>). Since upgrading your PostgreSQL - version requires a database dump and reload (see below), NixOS cannot - provide a default value for + (e.g. <literal>pkgs.postgresql_9_4</literal>). Since upgrading your + PostgreSQL version requires a database dump and reload (see below), NixOS + cannot provide a default value for <xref linkend="opt-services.postgresql.package"/> such as the most recent release of PostgreSQL. </para> diff --git a/nixos/modules/services/development/jupyter/default.nix b/nixos/modules/services/development/jupyter/default.nix index 9fcc00431865..f20860af6e12 100644 --- a/nixos/modules/services/development/jupyter/default.nix +++ b/nixos/modules/services/development/jupyter/default.nix @@ -145,6 +145,7 @@ in { systemd.services.jupyter = { description = "Jupyter development server"; + after = [ "network.target" ]; wantedBy = [ "multi-user.target" ]; # TODO: Patch notebook so we can explicitly pass in a shell diff --git a/nixos/modules/services/hardware/upower.nix b/nixos/modules/services/hardware/upower.nix index 2198842a4511..1da47349c077 100644 --- a/nixos/modules/services/hardware/upower.nix +++ b/nixos/modules/services/hardware/upower.nix @@ -56,6 +56,32 @@ in { Type = "dbus"; BusName = "org.freedesktop.UPower"; ExecStart = "@${cfg.package}/libexec/upowerd upowerd"; + Restart = "on-failure"; + # Upstream lockdown: + # Filesystem lockdown + ProtectSystem = "strict"; + # Needed by keyboard backlight support + ProtectKernelTunables = false; + ProtectControlGroups = true; + ReadWritePaths = "/var/lib/upower"; + ProtectHome = true; + PrivateTmp = true; + + # Network + # PrivateNetwork=true would block udev's netlink socket + RestrictAddressFamilies = "AF_UNIX AF_NETLINK"; + + # Execute Mappings + MemoryDenyWriteExecute = true; + + # Modules + ProtectKernelModules = true; + + # Real-time + RestrictRealtime = true; + + # Privilege escalation + NoNewPrivileges = true; }; }; diff --git a/nixos/modules/services/mail/clamsmtp.nix b/nixos/modules/services/mail/clamsmtp.nix index 8f4f39aa7288..fc1267c5d280 100644 --- a/nixos/modules/services/mail/clamsmtp.nix +++ b/nixos/modules/services/mail/clamsmtp.nix @@ -176,4 +176,6 @@ in } ) cfg.instances); }; + + meta.maintainers = with lib.maintainers; [ ekleog ]; } diff --git a/nixos/modules/services/mail/dkimproxy-out.nix b/nixos/modules/services/mail/dkimproxy-out.nix index 894b88e25c1b..f4ac9e47007a 100644 --- a/nixos/modules/services/mail/dkimproxy-out.nix +++ b/nixos/modules/services/mail/dkimproxy-out.nix @@ -115,4 +115,6 @@ in }; }; }; + + meta.maintainers = with lib.maintainers; [ ekleog ]; } diff --git a/nixos/modules/services/mail/rspamd.nix b/nixos/modules/services/mail/rspamd.nix index ff01a5dee53d..78a2f37b6ded 100644 --- a/nixos/modules/services/mail/rspamd.nix +++ b/nixos/modules/services/mail/rspamd.nix @@ -127,11 +127,15 @@ let options { pidfile = "$RUNDIR/rspamd.pid"; .include "$CONFDIR/options.inc" + .include(try=true; priority=1,duplicate=merge) "$LOCAL_CONFDIR/local.d/options.inc" + .include(try=true; priority=10) "$LOCAL_CONFDIR/override.d/options.inc" } logging { type = "syslog"; .include "$CONFDIR/logging.inc" + .include(try=true; priority=1,duplicate=merge) "$LOCAL_CONFDIR/local.d/logging.inc" + .include(try=true; priority=10) "$LOCAL_CONFDIR/override.d/logging.inc" } ${concatStringsSep "\n" (mapAttrsToList (name: value: '' @@ -149,6 +153,42 @@ let ${cfg.extraConfig} ''; + filterFiles = files: filterAttrs (n: v: v.enable) files; + rspamdDir = pkgs.linkFarm "etc-rspamd-dir" ( + (mapAttrsToList (name: file: { name = "local.d/${name}"; path = file.source; }) (filterFiles cfg.locals)) ++ + (mapAttrsToList (name: file: { name = "override.d/${name}"; path = file.source; }) (filterFiles cfg.overrides)) ++ + (optional (cfg.localLuaRules != null) { name = "rspamd.local.lua"; path = cfg.localLuaRules; }) ++ + [ { name = "rspamd.conf"; path = rspamdConfFile; } ] + ); + + configFileModule = prefix: { name, config, ... }: { + options = { + enable = mkOption { + type = types.bool; + default = true; + description = '' + Whether this file ${prefix} should be generated. This + option allows specific ${prefix} files to be disabled. + ''; + }; + + text = mkOption { + default = null; + type = types.nullOr types.lines; + description = "Text of the file."; + }; + + source = mkOption { + type = types.path; + description = "Path of the source file."; + }; + }; + config = { + source = mkIf (config.text != null) ( + let name' = "rspamd-${prefix}-" + baseNameOf name; + in mkDefault (pkgs.writeText name' config.text)); + }; + }; in { @@ -167,6 +207,41 @@ in description = "Whether to run the rspamd daemon in debug mode."; }; + locals = mkOption { + type = with types; attrsOf (submodule (configFileModule "locals")); + default = {}; + description = '' + Local configuration files, written into <filename>/etc/rspamd/local.d/{name}</filename>. + ''; + example = literalExample '' + { "redis.conf".source = "/nix/store/.../etc/dir/redis.conf"; + "arc.conf".text = "allow_envfrom_empty = true;"; + } + ''; + }; + + overrides = mkOption { + type = with types; attrsOf (submodule (configFileModule "overrides")); + default = {}; + description = '' + Overridden configuration files, written into <filename>/etc/rspamd/override.d/{name}</filename>. + ''; + example = literalExample '' + { "redis.conf".source = "/nix/store/.../etc/dir/redis.conf"; + "arc.conf".text = "allow_envfrom_empty = true;"; + } + ''; + }; + + localLuaRules = mkOption { + default = null; + type = types.nullOr types.path; + description = '' + Path of file to link to <filename>/etc/rspamd/rspamd.local.lua</filename> for local + rules written in Lua + ''; + }; + workers = mkOption { type = with types; attrsOf (submodule workerOpts); description = '' @@ -242,16 +317,17 @@ in gid = config.ids.gids.rspamd; }; - environment.etc."rspamd.conf".source = rspamdConfFile; + environment.etc."rspamd".source = rspamdDir; systemd.services.rspamd = { description = "Rspamd Service"; wantedBy = [ "multi-user.target" ]; after = [ "network.target" ]; + restartTriggers = [ rspamdDir ]; serviceConfig = { - ExecStart = "${pkgs.rspamd}/bin/rspamd ${optionalString cfg.debug "-d"} --user=${cfg.user} --group=${cfg.group} --pid=/run/rspamd.pid -c ${rspamdConfFile} -f"; + ExecStart = "${pkgs.rspamd}/bin/rspamd ${optionalString cfg.debug "-d"} --user=${cfg.user} --group=${cfg.group} --pid=/run/rspamd.pid -c /etc/rspamd/rspamd.conf -f"; Restart = "always"; RuntimeDirectory = "rspamd"; PrivateTmp = true; diff --git a/nixos/modules/services/misc/gitlab.nix b/nixos/modules/services/misc/gitlab.nix index 8ea831afb7c1..aa72cda70453 100644 --- a/nixos/modules/services/misc/gitlab.nix +++ b/nixos/modules/services/misc/gitlab.nix @@ -14,15 +14,16 @@ let pathUrlQuote = url: replaceStrings ["/"] ["%2F"] url; pgSuperUser = config.services.postgresql.superUser; - databaseYml = '' - production: - adapter: postgresql - database: ${cfg.databaseName} - host: ${cfg.databaseHost} - password: ${cfg.databasePassword} - username: ${cfg.databaseUsername} - encoding: utf8 - ''; + databaseConfig = { + production = { + adapter = "postgresql"; + database = cfg.databaseName; + host = cfg.databaseHost; + password = cfg.databasePassword; + username = cfg.databaseUsername; + encoding = "utf8"; + }; + }; gitalyToml = pkgs.writeText "gitaly.toml" '' socket_path = "${lib.escape ["\""] gitalySocket}" @@ -45,35 +46,31 @@ let '') gitlabConfig.production.repositories.storages))} ''; - gitlabShellYml = '' - user: ${cfg.user} - gitlab_url: "http+unix://${pathUrlQuote gitlabSocket}" - http_settings: - self_signed_cert: false - repos_path: "${cfg.statePath}/repositories" - secret_file: "${cfg.statePath}/config/gitlab_shell_secret" - log_file: "${cfg.statePath}/log/gitlab-shell.log" - custom_hooks_dir: "${cfg.statePath}/custom_hooks" - redis: - bin: ${pkgs.redis}/bin/redis-cli - host: 127.0.0.1 - port: 6379 - database: 0 - namespace: resque:gitlab - ''; + gitlabShellConfig = { + user = cfg.user; + gitlab_url = "http+unix://${pathUrlQuote gitlabSocket}"; + http_settings.self_signed_cert = false; + repos_path = "${cfg.statePath}/repositories"; + secret_file = "${cfg.statePath}/config/gitlab_shell_secret"; + log_file = "${cfg.statePath}/log/gitlab-shell.log"; + custom_hooks_dir = "${cfg.statePath}/custom_hooks"; + redis = { + bin = "${pkgs.redis}/bin/redis-cli"; + host = "127.0.0.1"; + port = 6379; + database = 0; + namespace = "resque:gitlab"; + }; + }; - redisYml = '' - production: - url: redis://localhost:6379/ - ''; + redisConfig.production.url = "redis://localhost:6379/"; - secretsYml = '' - production: - secret_key_base: ${cfg.secrets.secret} - otp_key_base: ${cfg.secrets.otp} - db_key_base: ${cfg.secrets.db} - openid_connect_signing_key: ${builtins.toJSON cfg.secrets.jws} - ''; + secretsConfig.production = { + secret_key_base = cfg.secrets.secret; + otp_key_base = cfg.secrets.otp; + db_key_base = cfg.secrets.db; + openid_connect_signing_key = cfg.secrets.jws; + }; gitlabConfig = { # These are the default settings from config/gitlab.example.yml @@ -115,12 +112,8 @@ let upload_pack = true; receive_pack = true; }; - workhorse = { - secret_file = "${cfg.statePath}/.gitlab_workhorse_secret"; - }; - git = { - bin_path = "git"; - }; + workhorse.secret_file = "${cfg.statePath}/.gitlab_workhorse_secret"; + git.bin_path = "git"; monitoring = { ip_whitelist = [ "127.0.0.0/8" "::1/128" ]; sidekiq_exporter = { @@ -138,7 +131,7 @@ let HOME = "${cfg.statePath}/home"; UNICORN_PATH = "${cfg.statePath}/"; GITLAB_PATH = "${cfg.packages.gitlab}/share/gitlab/"; - GITLAB_STATE_PATH = "${cfg.statePath}"; + GITLAB_STATE_PATH = cfg.statePath; GITLAB_UPLOADS_PATH = "${cfg.statePath}/uploads"; SCHEMA = "${cfg.statePath}/db/schema.rb"; GITLAB_LOG_PATH = "${cfg.statePath}/log"; @@ -146,13 +139,11 @@ let GITLAB_SHELL_CONFIG_PATH = "${cfg.statePath}/shell/config.yml"; GITLAB_SHELL_SECRET_PATH = "${cfg.statePath}/config/gitlab_shell_secret"; GITLAB_SHELL_HOOKS_PATH = "${cfg.statePath}/shell/hooks"; - GITLAB_REDIS_CONFIG_FILE = pkgs.writeText "gitlab-redis.yml" redisYml; + GITLAB_REDIS_CONFIG_FILE = pkgs.writeText "redis.yml" (builtins.toJSON redisConfig); prometheus_multiproc_dir = "/run/gitlab"; RAILS_ENV = "production"; }; - unicornConfig = builtins.readFile ./defaultUnicornConfig.rb; - gitlab-rake = pkgs.stdenv.mkDerivation rec { name = "gitlab-rake"; buildInputs = [ pkgs.makeWrapper ]; @@ -162,7 +153,6 @@ let mkdir -p $out/bin makeWrapper ${cfg.packages.gitlab.rubyEnv}/bin/rake $out/bin/gitlab-rake \ ${concatStrings (mapAttrsToList (name: value: "--set ${name} '${value}' ") gitlabEnv)} \ - --set GITLAB_CONFIG_PATH '${cfg.statePath}/config' \ --set PATH '${lib.makeBinPath [ pkgs.nodejs pkgs.gzip pkgs.git pkgs.gnutar config.services.postgresql.package pkgs.coreutils pkgs.procps ]}:$PATH' \ --set RAKEOPT '-f ${cfg.packages.gitlab}/share/gitlab/Rakefile' \ --run 'cd ${cfg.packages.gitlab}/share/gitlab' @@ -306,7 +296,6 @@ in { initialRootPassword = mkOption { type = types.str; - default = "UseNixOS!"; description = '' Initial password of the root account if this is a new install. ''; @@ -461,10 +450,30 @@ in { } ]; + systemd.tmpfiles.rules = [ + "d /run/gitlab 0755 ${cfg.user} ${cfg.group} -" + "d ${gitlabEnv.HOME} 0750 ${cfg.user} ${cfg.group} -" + "d ${cfg.backupPath} 0750 ${cfg.user} ${cfg.group} -" + "d ${cfg.statePath}/builds 0750 ${cfg.user} ${cfg.group} -" + "d ${cfg.statePath}/config 0750 ${cfg.user} ${cfg.group} -" + "d ${cfg.statePath}/db 0750 ${cfg.user} ${cfg.group} -" + "d ${cfg.statePath}/log 0750 ${cfg.user} ${cfg.group} -" + "d ${cfg.statePath}/repositories 2770 ${cfg.user} ${cfg.group} -" + "d ${cfg.statePath}/shell 0750 ${cfg.user} ${cfg.group} -" + "d ${cfg.statePath}/tmp/pids 0750 ${cfg.user} ${cfg.group} -" + "d ${cfg.statePath}/tmp/sockets 0750 ${cfg.user} ${cfg.group} -" + "d ${cfg.statePath}/uploads 0700 ${cfg.user} ${cfg.group} -" + "d ${cfg.statePath}/custom_hooks/pre-receive.d 0700 ${cfg.user} ${cfg.group} -" + "d ${cfg.statePath}/custom_hooks/post-receive.d 0700 ${cfg.user} ${cfg.group} -" + "d ${cfg.statePath}/custom_hooks/update.d 0700 ${cfg.user} ${cfg.group} -" + "d ${gitlabConfig.production.shared.path}/artifacts 0750 ${cfg.user} ${cfg.group} -" + "d ${gitlabConfig.production.shared.path}/lfs-objects 0750 ${cfg.user} ${cfg.group} -" + "d ${gitlabConfig.production.shared.path}/pages 0750 ${cfg.user} ${cfg.group} -" + ]; + systemd.services.gitlab-sidekiq = { - after = [ "network.target" "redis.service" ]; + after = [ "network.target" "redis.service" "gitlab.service" ]; wantedBy = [ "multi-user.target" ]; - partOf = [ "gitlab.service" ]; environment = gitlabEnv; path = with pkgs; [ config.services.postgresql.package @@ -486,10 +495,8 @@ in { }; systemd.services.gitaly = { - after = [ "network.target" "gitlab.service" ]; + after = [ "network.target" ]; wantedBy = [ "multi-user.target" ]; - environment.HOME = gitlabEnv.HOME; - environment.GITLAB_SHELL_CONFIG_PATH = gitlabEnv.GITLAB_SHELL_CONFIG_PATH; path = with pkgs; [ gitAndTools.git cfg.packages.gitaly.rubyEnv cfg.packages.gitaly.rubyEnv.wrappedRuby ]; serviceConfig = { Type = "simple"; @@ -505,8 +512,6 @@ in { systemd.services.gitlab-workhorse = { after = [ "network.target" ]; wantedBy = [ "multi-user.target" ]; - environment.HOME = gitlabEnv.HOME; - environment.GITLAB_SHELL_CONFIG_PATH = gitlabEnv.GITLAB_SHELL_CONFIG_PATH; path = with pkgs; [ gitAndTools.git gnutar @@ -514,10 +519,6 @@ in { openssh gitlab-workhorse ]; - preStart = '' - mkdir -p /run/gitlab - chown ${cfg.user}:${cfg.group} /run/gitlab - ''; serviceConfig = { PermissionsStartOnly = true; # preStart must be run as root Type = "simple"; @@ -538,7 +539,7 @@ in { }; systemd.services.gitlab = { - after = [ "network.target" "postgresql.service" "redis.service" ]; + after = [ "gitlab-workhorse.service" "gitaly.service" "network.target" "postgresql.service" "redis.service" ]; requires = [ "gitlab-sidekiq.service" ]; wantedBy = [ "multi-user.target" ]; environment = gitlabEnv; @@ -551,102 +552,76 @@ in { gnupg ]; preStart = '' - mkdir -p ${cfg.backupPath} - mkdir -p ${cfg.statePath}/builds - mkdir -p ${cfg.statePath}/repositories - mkdir -p ${gitlabConfig.production.shared.path}/artifacts - mkdir -p ${gitlabConfig.production.shared.path}/lfs-objects - mkdir -p ${gitlabConfig.production.shared.path}/pages - mkdir -p ${cfg.statePath}/log - mkdir -p ${cfg.statePath}/tmp/pids - mkdir -p ${cfg.statePath}/tmp/sockets - mkdir -p ${cfg.statePath}/shell - mkdir -p ${cfg.statePath}/db - mkdir -p ${cfg.statePath}/uploads - mkdir -p ${cfg.statePath}/custom_hooks/pre-receive.d - mkdir -p ${cfg.statePath}/custom_hooks/post-receive.d - mkdir -p ${cfg.statePath}/custom_hooks/update.d - - rm -rf ${cfg.statePath}/config ${cfg.statePath}/shell/hooks - mkdir -p ${cfg.statePath}/config - - ${pkgs.openssl}/bin/openssl rand -hex 32 > ${cfg.statePath}/config/gitlab_shell_secret - - mkdir -p /run/gitlab - mkdir -p ${cfg.statePath}/log - [ -d /run/gitlab/log ] || ln -sf ${cfg.statePath}/log /run/gitlab/log - [ -d /run/gitlab/tmp ] || ln -sf ${cfg.statePath}/tmp /run/gitlab/tmp - [ -d /run/gitlab/uploads ] || ln -sf ${cfg.statePath}/uploads /run/gitlab/uploads - ln -sf $GITLAB_SHELL_CONFIG_PATH /run/gitlab/shell-config.yml - chown -R ${cfg.user}:${cfg.group} /run/gitlab - - # Prepare home directory - mkdir -p ${gitlabEnv.HOME}/.ssh - touch ${gitlabEnv.HOME}/.ssh/authorized_keys - chown -R ${cfg.user}:${cfg.group} ${gitlabEnv.HOME}/ - cp -rf ${cfg.packages.gitlab}/share/gitlab/db/* ${cfg.statePath}/db - cp -rf ${cfg.packages.gitlab}/share/gitlab/config.dist/* ${cfg.statePath}/config - ${optionalString cfg.smtp.enable '' - ln -sf ${smtpSettings} ${cfg.statePath}/config/initializers/smtp_settings.rb - ''} - ln -sf ${cfg.statePath}/config /run/gitlab/config + rm -rf ${cfg.statePath}/config + mkdir ${cfg.statePath}/config if [ -e ${cfg.statePath}/lib ]; then rm ${cfg.statePath}/lib fi - ln -sf ${pkgs.gitlab}/share/gitlab/lib ${cfg.statePath}/lib + + ln -sf ${cfg.packages.gitlab}/share/gitlab/lib ${cfg.statePath}/lib + [ -L /run/gitlab/config ] || ln -sf ${cfg.statePath}/config /run/gitlab/config + [ -L /run/gitlab/log ] || ln -sf ${cfg.statePath}/log /run/gitlab/log + [ -L /run/gitlab/tmp ] || ln -sf ${cfg.statePath}/tmp /run/gitlab/tmp + [ -L /run/gitlab/uploads ] || ln -sf ${cfg.statePath}/uploads /run/gitlab/uploads + ${optionalString cfg.smtp.enable '' + ln -sf ${smtpSettings} ${cfg.statePath}/config/initializers/smtp_settings.rb + ''} cp ${cfg.packages.gitlab}/share/gitlab/VERSION ${cfg.statePath}/VERSION + cp -rf ${cfg.packages.gitlab}/share/gitlab/config.dist/* ${cfg.statePath}/config + ${pkgs.openssl}/bin/openssl rand -hex 32 > ${cfg.statePath}/config/gitlab_shell_secret # JSON is a subset of YAML - ln -fs ${pkgs.writeText "gitlab.yml" (builtins.toJSON gitlabConfig)} ${cfg.statePath}/config/gitlab.yml - ln -fs ${pkgs.writeText "database.yml" databaseYml} ${cfg.statePath}/config/database.yml - ln -fs ${pkgs.writeText "secrets.yml" secretsYml} ${cfg.statePath}/config/secrets.yml - ln -fs ${pkgs.writeText "unicorn.rb" unicornConfig} ${cfg.statePath}/config/unicorn.rb - - chown -R ${cfg.user}:${cfg.group} ${cfg.statePath}/ - chmod -R ug+rwX,o-rwx+X ${cfg.statePath}/ + ln -sf ${pkgs.writeText "gitlab.yml" (builtins.toJSON gitlabConfig)} ${cfg.statePath}/config/gitlab.yml + ln -sf ${pkgs.writeText "database.yml" (builtins.toJSON databaseConfig)} ${cfg.statePath}/config/database.yml + ln -sf ${pkgs.writeText "secrets.yml" (builtins.toJSON secretsConfig)} ${cfg.statePath}/config/secrets.yml + ln -sf ${./defaultUnicornConfig.rb} ${cfg.statePath}/config/unicorn.rb # Install the shell required to push repositories - ln -fs ${pkgs.writeText "config.yml" gitlabShellYml} "$GITLAB_SHELL_CONFIG_PATH" - ln -fs ${cfg.packages.gitlab-shell}/hooks "$GITLAB_SHELL_HOOKS_PATH" + ln -sf ${pkgs.writeText "config.yml" (builtins.toJSON gitlabShellConfig)} /run/gitlab/shell-config.yml + [ -L ${cfg.statePath}/shell/hooks ] || ln -sf ${cfg.packages.gitlab-shell}/hooks ${cfg.statePath}/shell/hooks ${cfg.packages.gitlab-shell}/bin/install - if [ "${cfg.databaseHost}" = "127.0.0.1" ]; then - if ! test -e "${cfg.statePath}/db-created"; then + chown -R ${cfg.user}:${cfg.group} ${cfg.statePath}/ + chmod -R ug+rwX,o-rwx+X ${cfg.statePath}/ + chown -R ${cfg.user}:${cfg.group} /run/gitlab + + if ! test -e "${cfg.statePath}/db-created"; then + if [ "${cfg.databaseHost}" = "127.0.0.1" ]; then ${pkgs.sudo}/bin/sudo -u ${pgSuperUser} psql postgres -c "CREATE ROLE ${cfg.databaseUsername} WITH LOGIN NOCREATEDB NOCREATEROLE ENCRYPTED PASSWORD '${cfg.databasePassword}'" ${pkgs.sudo}/bin/sudo -u ${pgSuperUser} ${config.services.postgresql.package}/bin/createdb --owner ${cfg.databaseUsername} ${cfg.databaseName} - touch "${cfg.statePath}/db-created" + + # enable required pg_trgm extension for gitlab + ${pkgs.sudo}/bin/sudo -u ${pgSuperUser} psql ${cfg.databaseName} -c "CREATE EXTENSION IF NOT EXISTS pg_trgm" fi - # enable required pg_trgm extension for gitlab - ${pkgs.sudo}/bin/sudo -u ${pgSuperUser} psql ${cfg.databaseName} -c "CREATE EXTENSION IF NOT EXISTS pg_trgm" + ${pkgs.sudo}/bin/sudo -u ${cfg.user} -H ${gitlab-rake}/bin/gitlab-rake db:schema:load + + touch "${cfg.statePath}/db-created" fi # Always do the db migrations just to be sure the database is up-to-date - ${gitlab-rake}/bin/gitlab-rake db:migrate RAILS_ENV=production + ${pkgs.sudo}/bin/sudo -u ${cfg.user} -H ${gitlab-rake}/bin/gitlab-rake db:migrate - # The gitlab:setup task is horribly broken somehow, the db:migrate - # task above and the db:seed_fu below will do the same for setting - # up the initial database if ! test -e "${cfg.statePath}/db-seeded"; then - ${gitlab-rake}/bin/gitlab-rake db:seed_fu RAILS_ENV=production \ + ${pkgs.sudo}/bin/sudo -u ${cfg.user} ${gitlab-rake}/bin/gitlab-rake db:seed_fu \ GITLAB_ROOT_PASSWORD='${cfg.initialRootPassword}' GITLAB_ROOT_EMAIL='${cfg.initialRootEmail}' touch "${cfg.statePath}/db-seeded" fi # The gitlab:shell:setup regenerates the authorized_keys file so that # the store path to the gitlab-shell in it gets updated - ${pkgs.sudo}/bin/sudo -u ${cfg.user} force=yes ${gitlab-rake}/bin/gitlab-rake gitlab:shell:setup RAILS_ENV=production + ${pkgs.sudo}/bin/sudo -u ${cfg.user} -H force=yes ${gitlab-rake}/bin/gitlab-rake gitlab:shell:setup # The gitlab:shell:create_hooks task seems broken for fixing links # so we instead delete all the hooks and create them anew rm -f ${cfg.statePath}/repositories/**/*.git/hooks - ${gitlab-rake}/bin/gitlab-rake gitlab:shell:create_hooks RAILS_ENV=production + ${pkgs.sudo}/bin/sudo -u ${cfg.user} -H ${gitlab-rake}/bin/gitlab-rake gitlab:shell:create_hooks + + ${pkgs.sudo}/bin/sudo -u ${cfg.user} -H ${pkgs.git}/bin/git config --global core.autocrlf "input" # Change permissions in the last step because some of the # intermediary scripts like to create directories as root. - chown -R ${cfg.user}:${cfg.group} ${cfg.statePath} - chmod -R ug+rwX,o-rwx+X ${cfg.statePath} chmod -R u+rwX,go-rwx+X ${gitlabEnv.HOME} chmod -R ug+rwX,o-rwx ${cfg.statePath}/repositories chmod -R ug-s ${cfg.statePath}/repositories diff --git a/nixos/modules/services/misc/home-assistant.nix b/nixos/modules/services/misc/home-assistant.nix index 0756e81612ac..2e9aa33aeeee 100644 --- a/nixos/modules/services/misc/home-assistant.nix +++ b/nixos/modules/services/misc/home-assistant.nix @@ -157,6 +157,7 @@ in { Restart = "on-failure"; ProtectSystem = "strict"; ReadWritePaths = "${cfg.configDir}"; + KillSignal = "SIGINT"; PrivateTmp = true; RemoveIPC = true; }; diff --git a/nixos/modules/services/misc/packagekit.nix b/nixos/modules/services/misc/packagekit.nix index 2d1ff7bb4117..bce21e8acff3 100644 --- a/nixos/modules/services/misc/packagekit.nix +++ b/nixos/modules/services/misc/packagekit.nix @@ -6,11 +6,8 @@ let cfg = config.services.packagekit; - backend = "nix"; - packagekitConf = '' [Daemon] -DefaultBackend=${backend} KeepCache=false ''; diff --git a/nixos/modules/services/monitoring/kapacitor.nix b/nixos/modules/services/monitoring/kapacitor.nix new file mode 100644 index 000000000000..1de0a8d5af2f --- /dev/null +++ b/nixos/modules/services/monitoring/kapacitor.nix @@ -0,0 +1,154 @@ +{ options, config, lib, pkgs, ... }: + +with lib; + +let + cfg = config.services.kapacitor; + + kapacitorConf = pkgs.writeTextFile { + name = "kapacitord.conf"; + text = '' + hostname="${config.networking.hostName}" + data_dir="${cfg.dataDir}" + + [http] + bind-address = "${cfg.bind}:${toString cfg.port}" + log-enabled = false + auth-enabled = false + + [task] + dir = "${cfg.dataDir}/tasks" + snapshot-interval = "${cfg.taskSnapshotInterval}" + + [replay] + dir = "${cfg.dataDir}/replay" + + [storage] + boltdb = "${cfg.dataDir}/kapacitor.db" + + ${optionalString (cfg.loadDirectory != null) '' + [load] + enabled = true + dir = "${cfg.loadDirectory}" + ''} + + ${optionalString (cfg.defaultDatabase.enable) '' + [[influxdb]] + name = "default" + enabled = true + default = true + urls = [ "${cfg.defaultDatabase.url}" ] + username = "${cfg.defaultDatabase.username}" + password = "${cfg.defaultDatabase.password}" + ''} + + ${cfg.extraConfig} + ''; + }; +in +{ + options.services.kapacitor = { + enable = mkEnableOption "kapacitor"; + + dataDir = mkOption { + type = types.path; + example = "/var/lib/kapacitor"; + default = "/var/lib/kapacitor"; + description = "Location where Kapacitor stores its state"; + }; + + port = mkOption { + type = types.int; + default = 9092; + description = "Port of Kapacitor"; + }; + + bind = mkOption { + type = types.str; + default = ""; + example = literalExample "0.0.0.0"; + description = "Address to bind to. The default is to bind to all addresses"; + }; + + extraConfig = mkOption { + description = "These lines go into kapacitord.conf verbatim."; + default = ""; + type = types.lines; + }; + + user = mkOption { + type = types.str; + default = "kapacitor"; + description = "User account under which Kapacitor runs"; + }; + + group = mkOption { + type = types.str; + default = "kapacitor"; + description = "Group under which Kapacitor runs"; + }; + + taskSnapshotInterval = mkOption { + type = types.str; + description = "Specifies how often to snapshot the task state (in InfluxDB time units)"; + default = "1m0s"; + example = "1m0s"; + }; + + loadDirectory = mkOption { + type = types.nullOr types.path; + description = "Directory where to load services from, such as tasks, templates and handlers (or null to disable service loading on startup)"; + default = null; + }; + + defaultDatabase = { + enable = mkEnableOption "kapacitor.defaultDatabase"; + + url = mkOption { + description = "The URL to an InfluxDB server that serves as the default database"; + example = "http://localhost:8086"; + type = types.string; + }; + + username = mkOption { + description = "The username to connect to the remote InfluxDB server"; + type = types.string; + }; + + password = mkOption { + description = "The password to connect to the remote InfluxDB server"; + type = types.string; + }; + }; + }; + + config = mkIf cfg.enable { + environment.systemPackages = [ pkgs.kapacitor ]; + + systemd.services.kapacitor = { + description = "Kapacitor Real-Time Stream Processing Engine"; + wantedBy = [ "multi-user.target" ]; + after = [ "networking.target" ]; + serviceConfig = { + ExecStart = "${pkgs.kapacitor}/bin/kapacitord -config ${kapacitorConf}"; + User = "kapacitor"; + Group = "kapacitor"; + PermissionsStartOnly = true; + }; + preStart = '' + mkdir -p ${cfg.dataDir} + chown ${cfg.user}:${cfg.group} ${cfg.dataDir} + ''; + }; + + users.users.kapacitor = { + uid = config.ids.uids.kapacitor; + description = "Kapacitor user"; + home = cfg.dataDir; + }; + + users.groups.kapacitor = { + gid = config.ids.gids.kapacitor; + }; + }; +} diff --git a/nixos/modules/services/monitoring/prometheus/default.nix b/nixos/modules/services/monitoring/prometheus/default.nix index e2ee995cea80..bf4dfc666bb6 100644 --- a/nixos/modules/services/monitoring/prometheus/default.nix +++ b/nixos/modules/services/monitoring/prometheus/default.nix @@ -10,6 +10,13 @@ let # Get a submodule without any embedded metadata: _filter = x: filterAttrs (k: v: k != "_module") x; + # a wrapper that verifies that the configuration is valid + promtoolCheck = what: name: file: pkgs.runCommand "${name}-${what}-checked" + { buildInputs = [ cfg.package ]; } '' + ln -s ${file} $out + promtool ${what} $out + ''; + # Pretty-print JSON to a file writePrettyJSON = name: x: pkgs.runCommand name { } '' @@ -19,18 +26,19 @@ let # This becomes the main config file promConfig = { global = cfg.globalConfig; - rule_files = cfg.ruleFiles ++ [ + rule_files = map (promtoolCheck "check-rules" "rules") (cfg.ruleFiles ++ [ (pkgs.writeText "prometheus.rules" (concatStringsSep "\n" cfg.rules)) - ]; + ]); scrape_configs = cfg.scrapeConfigs; }; generatedPrometheusYml = writePrettyJSON "prometheus.yml" promConfig; - prometheusYml = - if cfg.configText != null then + prometheusYml = let + yml = if cfg.configText != null then pkgs.writeText "prometheus.yml" cfg.configText - else generatedPrometheusYml; + else generatedPrometheusYml; + in promtoolCheck "check-config" "prometheus.yml" yml; cmdlineArgs = cfg.extraFlags ++ [ "-storage.local.path=${cfg.dataDir}/metrics" @@ -376,6 +384,15 @@ in { ''; }; + package = mkOption { + type = types.package; + default = pkgs.prometheus; + defaultText = "pkgs.prometheus"; + description = '' + The prometheus package that should be used. + ''; + }; + listenAddress = mkOption { type = types.str; default = "0.0.0.0:9090"; @@ -495,7 +512,7 @@ in { after = [ "network.target" ]; script = '' #!/bin/sh - exec ${pkgs.prometheus}/bin/prometheus \ + exec ${cfg.package}/bin/prometheus \ ${concatStringsSep " \\\n " cmdlineArgs} ''; serviceConfig = { diff --git a/nixos/modules/services/networking/bitlbee.nix b/nixos/modules/services/networking/bitlbee.nix index 46e3b7457610..274b36171608 100644 --- a/nixos/modules/services/networking/bitlbee.nix +++ b/nixos/modules/services/networking/bitlbee.nix @@ -33,7 +33,7 @@ let purple_plugin_path = lib.concatMapStringsSep ":" - (plugin: "${plugin}/lib/pidgin/") + (plugin: "${plugin}/lib/pidgin/:${plugin}/lib/purple-2/") cfg.libpurple_plugins ; diff --git a/nixos/modules/services/networking/chrony.nix b/nixos/modules/services/networking/chrony.nix index a363b545d649..9b8005e706ae 100644 --- a/nixos/modules/services/networking/chrony.nix +++ b/nixos/modules/services/networking/chrony.nix @@ -93,6 +93,8 @@ in services.timesyncd.enable = mkForce false; + systemd.services.systemd-timedated.environment = { SYSTEMD_TIMEDATED_NTP_SERVICES = "chronyd.service"; }; + systemd.services.chronyd = { description = "chrony NTP daemon"; diff --git a/nixos/modules/services/networking/consul.nix b/nixos/modules/services/networking/consul.nix index ab3f81037681..0e90fed788b9 100644 --- a/nixos/modules/services/networking/consul.nix +++ b/nixos/modules/services/networking/consul.nix @@ -6,9 +6,10 @@ let dataDir = "/var/lib/consul"; cfg = config.services.consul; - configOptions = { data_dir = dataDir; } // - (if cfg.webUi then { ui_dir = "${cfg.package.ui}"; } else { }) // - cfg.extraConfig; + configOptions = { + data_dir = dataDir; + ui = cfg.webUi; + } // cfg.extraConfig; configFiles = [ "/etc/consul.json" "/etc/consul-addrs.json" ] ++ cfg.extraConfigFiles; diff --git a/nixos/modules/services/networking/ntpd.nix b/nixos/modules/services/networking/ntpd.nix index 342350d49ab3..32174100b0f7 100644 --- a/nixos/modules/services/networking/ntpd.nix +++ b/nixos/modules/services/networking/ntpd.nix @@ -67,6 +67,8 @@ in environment.systemPackages = [ pkgs.ntp ]; services.timesyncd.enable = mkForce false; + systemd.services.systemd-timedated.environment = { SYSTEMD_TIMEDATED_NTP_SERVICES = "ntpd.service"; }; + users.users = singleton { name = ntpUser; uid = config.ids.uids.ntp; diff --git a/nixos/modules/services/networking/redsocks.nix b/nixos/modules/services/networking/redsocks.nix index a47a78f1005e..8481f9debf39 100644 --- a/nixos/modules/services/networking/redsocks.nix +++ b/nixos/modules/services/networking/redsocks.nix @@ -267,4 +267,6 @@ in "ip46tables -t nat -D OUTPUT -p tcp ${redCond block} -j ${chain} 2>/dev/null || true" ) cfg.redsocks; }; + + meta.maintainers = with lib.maintainers; [ ekleog ]; } diff --git a/nixos/modules/services/networking/syncthing.nix b/nixos/modules/services/networking/syncthing.nix index fd31b2a67687..b2ef1885a955 100644 --- a/nixos/modules/services/networking/syncthing.nix +++ b/nixos/modules/services/networking/syncthing.nix @@ -63,8 +63,20 @@ in { type = types.path; default = "/var/lib/syncthing"; description = '' + Path where synced directories will exist. + ''; + }; + + configDir = mkOption { + type = types.path; + description = '' Path where the settings and keys will exist. ''; + default = + let + nixos = config.system.stateVersion; + cond = versionAtLeast nixos "19.03"; + in cfg.dataDir + (optionalString cond "/.config/syncthing"); }; openDefaultPorts = mkOption { @@ -144,7 +156,7 @@ in { ${cfg.package}/bin/syncthing \ -no-browser \ -gui-address=${cfg.guiAddress} \ - -home=${cfg.dataDir} + -home=${cfg.configDir} ''; }; }; diff --git a/nixos/modules/services/networking/zerotierone.nix b/nixos/modules/services/networking/zerotierone.nix index a4cd368397e7..764af3846fe5 100644 --- a/nixos/modules/services/networking/zerotierone.nix +++ b/nixos/modules/services/networking/zerotierone.nix @@ -39,7 +39,8 @@ in systemd.services.zerotierone = { description = "ZeroTierOne"; path = [ cfg.package ]; - after = [ "network.target" ]; + bindsTo = [ "network-online.target" ]; + after = [ "network-online.target" ]; wantedBy = [ "multi-user.target" ]; preStart = '' mkdir -p /var/lib/zerotier-one/networks.d diff --git a/nixos/modules/services/search/solr.nix b/nixos/modules/services/search/solr.nix index 90140a337ed8..7200c40e89f7 100644 --- a/nixos/modules/services/search/solr.nix +++ b/nixos/modules/services/search/solr.nix @@ -6,142 +6,105 @@ let cfg = config.services.solr; - # Assemble all jars needed for solr - solrJars = pkgs.stdenv.mkDerivation { - name = "solr-jars"; - - src = pkgs.fetchurl { - url = http://archive.apache.org/dist/tomcat/tomcat-5/v5.5.36/bin/apache-tomcat-5.5.36.tar.gz; - sha256 = "01mzvh53wrs1p2ym765jwd00gl6kn8f9k3nhdrnhdqr8dhimfb2p"; - }; - - installPhase = '' - mkdir -p $out/lib - cp common/lib/*.jar $out/lib/ - ln -s ${pkgs.ant}/lib/ant/lib/ant.jar $out/lib/ - ln -s ${cfg.solrPackage}/lib/ext/* $out/lib/ - ln -s ${pkgs.jdk.home}/lib/tools.jar $out/lib/ - '' + optionalString (cfg.extraJars != []) '' - for f in ${concatStringsSep " " cfg.extraJars}; do - cp $f $out/lib - done - ''; - }; - -in { +in +{ options = { services.solr = { - enable = mkOption { - type = types.bool; - default = false; - description = '' - Enables the solr service. - ''; - }; - - javaPackage = mkOption { - type = types.package; - default = pkgs.jre; - defaultText = "pkgs.jre"; - description = '' - Which Java derivation to use for running solr. - ''; - }; + enable = mkEnableOption "Enables the solr service."; - solrPackage = mkOption { + package = mkOption { type = types.package; default = pkgs.solr; defaultText = "pkgs.solr"; - description = '' - Which solr derivation to use for running solr. - ''; + description = "Which Solr package to use."; }; - extraJars = mkOption { - type = types.listOf types.path; - default = []; - description = '' - List of paths pointing to jars. Jars are copied to commonLibFolder to be available to java/solr. - ''; + port = mkOption { + type = types.int; + default = 8983; + description = "Port on which Solr is ran."; }; - log4jConfiguration = mkOption { - type = types.lines; - default = '' - log4j.rootLogger=INFO, stdout - log4j.appender.stdout=org.apache.log4j.ConsoleAppender - log4j.appender.stdout.Target=System.out - log4j.appender.stdout.layout=org.apache.log4j.PatternLayout - log4j.appender.stdout.layout.ConversionPattern=%d{yyyy-MM-dd HH:mm:ss} %-5p %c{1}:%L - %m%n - ''; - description = '' - Contents of the <literal>log4j.properties</literal> used. By default, - everything is logged to stdout (picked up by systemd) with level INFO. - ''; + stateDir = mkOption { + type = types.path; + default = "/var/lib/solr"; + description = "The solr home directory containing config, data, and logging files."; }; - user = mkOption { - type = types.str; - description = '' - The user that should run the solr process and. - the working directories. - ''; + extraJavaOptions = mkOption { + type = types.listOf types.str; + default = []; + description = "Extra command line options given to the java process running Solr."; }; - group = mkOption { + user = mkOption { type = types.str; - description = '' - The group that will own the working directory. - ''; + default = "solr"; + description = "User under which Solr is ran."; }; - solrHome = mkOption { + group = mkOption { type = types.str; - description = '' - The solr home directory. It is your own responsibility to - make sure this directory contains a working solr configuration, - and is writeable by the the user running the solr service. - Failing to do so, the solr will not start properly. - ''; - }; - - extraJavaOptions = mkOption { - type = types.listOf types.str; - default = []; - description = '' - Extra command line options given to the java process running - solr. - ''; - }; - - extraWinstoneOptions = mkOption { - type = types.listOf types.str; - default = []; - description = '' - Extra command line options given to the Winstone, which is - the servlet container hosting solr. - ''; + default = "solr"; + description = "Group under which Solr is ran."; }; }; }; config = mkIf cfg.enable { - services.winstone.solr = { - serviceName = "solr"; - inherit (cfg) user group javaPackage; - warFile = "${cfg.solrPackage}/lib/solr.war"; - extraOptions = [ - "--commonLibFolder=${solrJars}/lib" - "--useJasper" - ] ++ cfg.extraWinstoneOptions; - extraJavaOptions = [ - "-Dsolr.solr.home=${cfg.solrHome}" - "-Dlog4j.configuration=file://${pkgs.writeText "log4j.properties" cfg.log4jConfiguration}" - ] ++ cfg.extraJavaOptions; + environment.systemPackages = [ cfg.package ]; + + systemd.services.solr = { + after = [ "network.target" "remote-fs.target" "nss-lookup.target" "systemd-journald-dev-log.socket" ]; + wantedBy = [ "multi-user.target" ]; + + environment = { + SOLR_HOME = "${cfg.stateDir}/data"; + LOG4J_PROPS = "${cfg.stateDir}/log4j2.xml"; + SOLR_LOGS_DIR = "${cfg.stateDir}/logs"; + SOLR_PORT = "${toString cfg.port}"; + }; + path = with pkgs; [ + gawk + procps + ]; + preStart = '' + mkdir -p "${cfg.stateDir}/data"; + mkdir -p "${cfg.stateDir}/logs"; + + if ! test -e "${cfg.stateDir}/data/solr.xml"; then + install -D -m0640 ${cfg.package}/server/solr/solr.xml "${cfg.stateDir}/data/solr.xml" + install -D -m0640 ${cfg.package}/server/solr/zoo.cfg "${cfg.stateDir}/data/zoo.cfg" + fi + + if ! test -e "${cfg.stateDir}/log4j2.xml"; then + install -D -m0640 ${cfg.package}/server/resources/log4j2.xml "${cfg.stateDir}/log4j2.xml" + fi + ''; + + serviceConfig = { + User = cfg.user; + Group = cfg.group; + ExecStart="${cfg.package}/bin/solr start -f -a \"${concatStringsSep " " cfg.extraJavaOptions}\""; + ExecStop="${cfg.package}/bin/solr stop"; + }; }; + users.users = optionalAttrs (cfg.user == "solr") (singleton + { name = "solr"; + group = cfg.group; + home = cfg.stateDir; + createHome = true; + uid = config.ids.uids.solr; + }); + + users.groups = optionalAttrs (cfg.group == "solr") (singleton + { name = "solr"; + gid = config.ids.gids.solr; + }); + }; } diff --git a/nixos/modules/services/web-servers/nginx/default.nix b/nixos/modules/services/web-servers/nginx/default.nix index 508398f03ace..6c733f093ba8 100644 --- a/nixos/modules/services/web-servers/nginx/default.nix +++ b/nixos/modules/services/web-servers/nginx/default.nix @@ -46,7 +46,7 @@ let configFile = pkgs.writeText "nginx.conf" '' user ${cfg.user} ${cfg.group}; - error_log stderr; + error_log ${cfg.logError}; daemon off; ${cfg.config} @@ -341,6 +341,35 @@ in "; }; + logError = mkOption { + default = "stderr"; + description = " + Configures logging. + The first parameter defines a file that will store the log. The + special value stderr selects the standard error file. Logging to + syslog can be configured by specifying the “syslog:” prefix. + The second parameter determines the level of logging, and can be + one of the following: debug, info, notice, warn, error, crit, + alert, or emerg. Log levels above are listed in the order of + increasing severity. Setting a certain log level will cause all + messages of the specified and more severe log levels to be logged. + If this parameter is omitted then error is used. + "; + }; + + preStart = mkOption { + type = types.lines; + default = '' + test -d ${cfg.stateDir}/logs || mkdir -m 750 -p ${cfg.stateDir}/logs + test `stat -c %a ${cfg.stateDir}` = "750" || chmod 750 ${cfg.stateDir} + test `stat -c %a ${cfg.stateDir}/logs` = "750" || chmod 750 ${cfg.stateDir}/logs + chown -R ${cfg.user}:${cfg.group} ${cfg.stateDir} + ''; + description = " + Shell commands executed before the service's nginx is started. + "; + }; + config = mkOption { default = ""; description = " @@ -608,9 +637,7 @@ in stopIfChanged = false; preStart = '' - mkdir -p ${cfg.stateDir}/logs - chmod 700 ${cfg.stateDir} - chown -R ${cfg.user}:${cfg.group} ${cfg.stateDir} + ${cfg.preStart} ${cfg.package}/bin/nginx -c ${configFile} -p ${cfg.stateDir} -t ''; serviceConfig = { diff --git a/nixos/modules/services/web-servers/tomcat.nix b/nixos/modules/services/web-servers/tomcat.nix index be54e9255c78..68261c50324d 100644 --- a/nixos/modules/services/web-servers/tomcat.nix +++ b/nixos/modules/services/web-servers/tomcat.nix @@ -31,10 +31,26 @@ in ''; }; + purifyOnStart = mkOption { + type = types.bool; + default = false; + description = '' + On startup, the `baseDir` directory is populated with various files, + subdirectories and symlinks. If this option is enabled, these items + (except for the `logs` and `work` subdirectories) are first removed. + This prevents interference from remainders of an old configuration + (libraries, webapps, etc.), so it's recommended to enable this option. + ''; + }; + baseDir = mkOption { type = lib.types.path; default = "/var/tomcat"; - description = "Location where Tomcat stores configuration files, webapplications and logfiles"; + description = '' + Location where Tomcat stores configuration files, web applications + and logfiles. Note that it is partially cleared on each service startup + if `purifyOnStart` is enabled. + ''; }; logDirs = mkOption { @@ -197,6 +213,15 @@ in after = [ "network.target" ]; preStart = '' + ${lib.optionalString cfg.purifyOnStart '' + # Delete most directories/symlinks we create from the existing base directory, + # to get rid of remainders of an old configuration. + # The list of directories to delete is taken from the "mkdir" command below, + # excluding "logs" (because logs are valuable) and "work" (because normally + # session files are there), and additionally including "bin". + rm -rf ${cfg.baseDir}/{conf,virtualhosts,temp,lib,shared/lib,webapps,bin} + ''} + # Create the base directory mkdir -p \ ${cfg.baseDir}/{conf,virtualhosts,logs,temp,lib,shared/lib,webapps,work} diff --git a/nixos/modules/services/x11/display-managers/lightdm-greeters/gtk.nix b/nixos/modules/services/x11/display-managers/lightdm-greeters/gtk.nix index 013956c05466..d1ee076e9185 100644 --- a/nixos/modules/services/x11/display-managers/lightdm-greeters/gtk.nix +++ b/nixos/modules/services/x11/display-managers/lightdm-greeters/gtk.nix @@ -22,7 +22,7 @@ let # This wrapper ensures that we actually get themes makeWrapper ${pkgs.lightdm_gtk_greeter}/sbin/lightdm-gtk-greeter \ $out/greeter \ - --prefix PATH : "${pkgs.glibc.bin}/bin" \ + --prefix PATH : "${lib.getBin pkgs.stdenv.cc.libc}/bin" \ --set GDK_PIXBUF_MODULE_FILE "${pkgs.librsvg.out}/lib/gdk-pixbuf-2.0/2.10.0/loaders.cache" \ --set GTK_PATH "${theme}:${pkgs.gtk3.out}" \ --set GTK_EXE_PREFIX "${theme}" \ diff --git a/nixos/modules/system/activation/activation-script.nix b/nixos/modules/system/activation/activation-script.nix index b1eaf0189562..74c150a848d1 100644 --- a/nixos/modules/system/activation/activation-script.nix +++ b/nixos/modules/system/activation/activation-script.nix @@ -21,7 +21,8 @@ let [ coreutils gnugrep findutils - glibc # needed for getent + getent + stdenv.cc.libc # nscd in update-users-groups.pl shadow nettools # needed for hostname utillinux # needed for mount and mountpoint diff --git a/nixos/modules/system/boot/stage-1.nix b/nixos/modules/system/boot/stage-1.nix index f4cf9753c0a1..e7167999a6f8 100644 --- a/nixos/modules/system/boot/stage-1.nix +++ b/nixos/modules/system/boot/stage-1.nix @@ -147,7 +147,7 @@ let ${config.boot.initrd.extraUtilsCommands} # Copy ld manually since it isn't detected correctly - cp -pv ${pkgs.glibc.out}/lib/ld*.so.? $out/lib + cp -pv ${pkgs.stdenv.cc.libc.out}/lib/ld*.so.? $out/lib # Copy all of the needed libraries find $out/bin $out/lib -type f | while read BIN; do diff --git a/nixos/modules/system/boot/systemd-nspawn.nix b/nixos/modules/system/boot/systemd-nspawn.nix index f4fa09694537..4f538ccdbbe1 100644 --- a/nixos/modules/system/boot/systemd-nspawn.nix +++ b/nixos/modules/system/boot/systemd-nspawn.nix @@ -112,6 +112,7 @@ in { environment.etc."systemd/nspawn".source = generateUnits "nspawn" units [] []; + systemd.targets."multi-user".wants = [ "machines.target "]; }; } diff --git a/nixos/modules/system/boot/systemd.nix b/nixos/modules/system/boot/systemd.nix index 3d9fa53ce522..89f8e8153550 100644 --- a/nixos/modules/system/boot/systemd.nix +++ b/nixos/modules/system/boot/systemd.nix @@ -387,7 +387,7 @@ let logindHandlerType = types.enum [ "ignore" "poweroff" "reboot" "halt" "kexec" "suspend" - "hibernate" "hybrid-sleep" "lock" + "hibernate" "hybrid-sleep" "suspend-then-hibernate" "lock" ]; in diff --git a/nixos/modules/tasks/filesystems.nix b/nixos/modules/tasks/filesystems.nix index b3690fad1a6a..9e4057b50897 100644 --- a/nixos/modules/tasks/filesystems.nix +++ b/nixos/modules/tasks/filesystems.nix @@ -230,6 +230,8 @@ in let fsToSkipCheck = [ "none" "bindfs" "btrfs" "zfs" "tmpfs" "nfs" "vboxsf" "glusterfs" ]; skipCheck = fs: fs.noCheck || fs.device == "none" || builtins.elem fs.fsType fsToSkipCheck; + # https://wiki.archlinux.org/index.php/fstab#Filepath_spaces + escape = string: builtins.replaceStrings [ " " ] [ "\\040" ] string; in '' # This is a generated file. Do not edit! # @@ -238,10 +240,10 @@ in # Filesystems. ${concatMapStrings (fs: - (if fs.device != null then fs.device - else if fs.label != null then "/dev/disk/by-label/${fs.label}" + (if fs.device != null then escape fs.device + else if fs.label != null then "/dev/disk/by-label/${escape fs.label}" else throw "No device specified for mount point ‘${fs.mountPoint}’.") - + " " + fs.mountPoint + + " " + escape fs.mountPoint + " " + fs.fsType + " " + builtins.concatStringsSep "," fs.options + " 0" diff --git a/nixos/modules/virtualisation/amazon-image.nix b/nixos/modules/virtualisation/amazon-image.nix index c92570582f20..9015200beead 100644 --- a/nixos/modules/virtualisation/amazon-image.nix +++ b/nixos/modules/virtualisation/amazon-image.nix @@ -53,7 +53,7 @@ let cfg = config.ec2; in # Mount all formatted ephemeral disks and activate all swap devices. # We cannot do this with the ‘fileSystems’ and ‘swapDevices’ options # because the set of devices is dependent on the instance type - # (e.g. "m1.large" has one ephemeral filesystem and one swap device, + # (e.g. "m1.small" has one ephemeral filesystem and one swap device, # while "m1.large" has two ephemeral filesystems and no swap # devices). Also, put /tmp and /var on /disk0, since it has a lot # more space than the root device. Similarly, "move" /nix to /disk0 diff --git a/nixos/modules/virtualisation/containers.nix b/nixos/modules/virtualisation/containers.nix index 8fe59badd335..2fcc0f254256 100644 --- a/nixos/modules/virtualisation/containers.nix +++ b/nixos/modules/virtualisation/containers.nix @@ -243,6 +243,9 @@ let Restart = "on-failure"; + Slice = "machine.slice"; + Delegate = true; + # Hack: we don't want to kill systemd-nspawn, since we call # "machinectl poweroff" in preStop to shut down the # container cleanly. But systemd requires sending a signal @@ -606,7 +609,7 @@ in { config = { config, pkgs, ... }: { services.postgresql.enable = true; - services.postgresql.package = pkgs.postgresql96; + services.postgresql.package = pkgs.postgresql_9_6; system.stateVersion = "17.03"; }; @@ -657,6 +660,8 @@ in serviceConfig = serviceDirectives dummyConfig; }; in { + systemd.targets."multi-user".wants = [ "machines.target" ]; + systemd.services = listToAttrs (filter (x: x.value != null) ( # The generic container template used by imperative containers [{ name = "container@"; value = unit; }] @@ -680,7 +685,7 @@ in } // ( if config.autoStart then { - wantedBy = [ "multi-user.target" ]; + wantedBy = [ "machines.target" ]; wants = [ "network.target" ]; after = [ "network.target" ]; restartTriggers = [ config.path ]; diff --git a/nixos/modules/virtualisation/docker-preloader.nix b/nixos/modules/virtualisation/docker-preloader.nix new file mode 100644 index 000000000000..faa94f53d98f --- /dev/null +++ b/nixos/modules/virtualisation/docker-preloader.nix @@ -0,0 +1,135 @@ +{ config, lib, pkgs, ... }: + +with lib; +with builtins; + +let + cfg = config.virtualisation; + + sanitizeImageName = image: replaceStrings ["/"] ["-"] image.imageName; + hash = drv: head (split "-" (baseNameOf drv.outPath)); + # The label of an ext4 FS is limited to 16 bytes + labelFromImage = image: substring 0 16 (hash image); + + # The Docker image is loaded and some files from /var/lib/docker/ + # are written into a qcow image. + preload = image: pkgs.vmTools.runInLinuxVM ( + pkgs.runCommand "docker-preload-image-${sanitizeImageName image}" { + buildInputs = with pkgs; [ docker e2fsprogs utillinux curl kmod ]; + preVM = pkgs.vmTools.createEmptyImage { + size = cfg.dockerPreloader.qcowSize; + fullName = "docker-deamon-image.qcow2"; + }; + } + '' + mkfs.ext4 /dev/vda + e2label /dev/vda ${labelFromImage image} + mkdir -p /var/lib/docker + mount -t ext4 /dev/vda /var/lib/docker + + modprobe overlay + + # from https://github.com/tianon/cgroupfs-mount/blob/master/cgroupfs-mount + mount -t tmpfs -o uid=0,gid=0,mode=0755 cgroup /sys/fs/cgroup + cd /sys/fs/cgroup + for sys in $(awk '!/^#/ { if ($4 == 1) print $1 }' /proc/cgroups); do + mkdir -p $sys + if ! mountpoint -q $sys; then + if ! mount -n -t cgroup -o $sys cgroup $sys; then + rmdir $sys || true + fi + fi + done + + dockerd -H tcp://127.0.0.1:5555 -H unix:///var/run/docker.sock & + + until $(curl --output /dev/null --silent --connect-timeout 2 http://127.0.0.1:5555); do + printf '.' + sleep 1 + done + + docker load -i ${image} + + kill %1 + find /var/lib/docker/ -maxdepth 1 -mindepth 1 -not -name "image" -not -name "overlay2" | xargs rm -rf + ''); + + preloadedImages = map preload cfg.dockerPreloader.images; + +in + +{ + options.virtualisation.dockerPreloader = { + images = mkOption { + default = [ ]; + type = types.listOf types.package; + description = + '' + A list of Docker images to preload (in the /var/lib/docker directory). + ''; + }; + qcowSize = mkOption { + default = 1024; + type = types.int; + description = + '' + The size (MB) of qcow files. + ''; + }; + }; + + config = { + assertions = [{ + # If docker.storageDriver is null, Docker choose the storage + # driver. So, in this case, we cannot be sure overlay2 is used. + assertion = cfg.dockerPreloader.images == [] + || cfg.docker.storageDriver == "overlay2" + || cfg.docker.storageDriver == "overlay" + || cfg.docker.storageDriver == null; + message = "The Docker image Preloader only works with overlay2 storage driver!"; + }]; + + virtualisation.qemu.options = + map (path: "-drive if=virtio,file=${path}/disk-image.qcow2,readonly,media=cdrom,format=qcow2") + preloadedImages; + + + # All attached QCOW files are mounted and their contents are linked + # to /var/lib/docker/ in order to make image available. + systemd.services.docker-preloader = { + description = "Preloaded Docker images"; + wantedBy = ["docker.service"]; + after = ["network.target"]; + path = with pkgs; [ mount rsync jq ]; + script = '' + mkdir -p /var/lib/docker/overlay2/l /var/lib/docker/image/overlay2 + echo '{}' > /tmp/repositories.json + + for i in ${concatStringsSep " " (map labelFromImage cfg.dockerPreloader.images)}; do + mkdir -p /mnt/docker-images/$i + + # The ext4 label is limited to 16 bytes + mount /dev/disk/by-label/$(echo $i | cut -c1-16) -o ro,noload /mnt/docker-images/$i + + find /mnt/docker-images/$i/overlay2/ -maxdepth 1 -mindepth 1 -not -name l\ + -exec ln -s '{}' /var/lib/docker/overlay2/ \; + cp -P /mnt/docker-images/$i/overlay2/l/* /var/lib/docker/overlay2/l/ + + rsync -a /mnt/docker-images/$i/image/ /var/lib/docker/image/ + + # Accumulate image definitions + cp /tmp/repositories.json /tmp/repositories.json.tmp + jq -s '.[0] * .[1]' \ + /tmp/repositories.json.tmp \ + /mnt/docker-images/$i/image/overlay2/repositories.json \ + > /tmp/repositories.json + done + + mv /tmp/repositories.json /var/lib/docker/image/overlay2/repositories.json + ''; + serviceConfig = { + Type = "oneshot"; + }; + }; + }; +} diff --git a/nixos/modules/virtualisation/google-compute-image.nix b/nixos/modules/virtualisation/google-compute-image.nix index caaf6c0aa59d..795858e5eae2 100644 --- a/nixos/modules/virtualisation/google-compute-image.nix +++ b/nixos/modules/virtualisation/google-compute-image.nix @@ -144,7 +144,6 @@ in path = with pkgs; [ iproute ]; serviceConfig = { ExecStart = "${gce}/bin/google_network_daemon --debug"; - Type = "oneshot"; }; }; diff --git a/nixos/modules/virtualisation/libvirtd.nix b/nixos/modules/virtualisation/libvirtd.nix index 3e38662f5b0f..f4d7af1664af 100644 --- a/nixos/modules/virtualisation/libvirtd.nix +++ b/nixos/modules/virtualisation/libvirtd.nix @@ -196,6 +196,8 @@ in { wantedBy = [ "multi-user.target" ]; path = with pkgs; [ coreutils libvirt gawk ]; restartIfChanged = false; + + environment.ON_SHUTDOWN = "${cfg.onShutdown}"; }; systemd.sockets.virtlogd = { diff --git a/nixos/modules/virtualisation/parallels-guest.nix b/nixos/modules/virtualisation/parallels-guest.nix index 36ca7f356d44..4e0f2cae299e 100644 --- a/nixos/modules/virtualisation/parallels-guest.nix +++ b/nixos/modules/virtualisation/parallels-guest.nix @@ -1,4 +1,4 @@ -{ config, lib, pkgs, pkgs_i686, ... }: +{ config, lib, pkgs, ... }: with lib; @@ -64,7 +64,7 @@ in }; hardware.opengl.package = prl-tools; - hardware.opengl.package32 = pkgs_i686.linuxPackages.prl-tools.override { libsOnly = true; kernel = null; }; + hardware.opengl.package32 = pkgs.pkgsi686Linux.linuxPackages.prl-tools.override { libsOnly = true; kernel = null; }; services.udev.packages = [ prl-tools ]; diff --git a/nixos/modules/virtualisation/qemu-vm.nix b/nixos/modules/virtualisation/qemu-vm.nix index 4e9c87222d0a..ed3431554be4 100644 --- a/nixos/modules/virtualisation/qemu-vm.nix +++ b/nixos/modules/virtualisation/qemu-vm.nix @@ -185,7 +185,10 @@ let in { - imports = [ ../profiles/qemu-guest.nix ]; + imports = [ + ../profiles/qemu-guest.nix + ./docker-preloader.nix + ]; options = { diff --git a/nixos/modules/virtualisation/virtualbox-image.nix b/nixos/modules/virtualisation/virtualbox-image.nix index 60048911658c..037c0d2f0d82 100644 --- a/nixos/modules/virtualisation/virtualbox-image.nix +++ b/nixos/modules/virtualisation/virtualbox-image.nix @@ -12,7 +12,7 @@ in { virtualbox = { baseImageSize = mkOption { type = types.int; - default = 10 * 1024; + default = 50 * 1024; description = '' The size of the VirtualBox base image in MiB. ''; @@ -61,7 +61,7 @@ in { export HOME=$PWD export PATH=${pkgs.virtualbox}/bin:$PATH - echo "creating VirtualBox pass-through disk wrapper (no copying invovled)..." + echo "creating VirtualBox pass-through disk wrapper (no copying involved)..." VBoxManage internalcommands createrawvmdk -filename disk.vmdk -rawdisk $diskImage echo "creating VirtualBox VM..." @@ -72,9 +72,9 @@ in { --memory ${toString cfg.memorySize} --acpi on --vram 32 \ ${optionalString (pkgs.stdenv.hostPlatform.system == "i686-linux") "--pae on"} \ --nictype1 virtio --nic1 nat \ - --audiocontroller ac97 --audio alsa \ + --audiocontroller ac97 --audio alsa --audioout on \ --rtcuseutc on \ - --usb on --mouse usbtablet + --usb on --usbehci on --mouse usbtablet VBoxManage storagectl "$vmName" --name SATA --add sata --portcount 4 --bootable on --hostiocache on VBoxManage storageattach "$vmName" --storagectl SATA --port 0 --device 0 --type hdd \ --medium disk.vmdk @@ -82,7 +82,7 @@ in { echo "exporting VirtualBox VM..." mkdir -p $out fn="$out/${cfg.vmFileName}" - VBoxManage export "$vmName" --output "$fn" + VBoxManage export "$vmName" --output "$fn" --options manifest rm -v $diskImage diff --git a/nixos/release.nix b/nixos/release.nix index 46dbe4aa77b2..4647f28be186 100644 --- a/nixos/release.nix +++ b/nixos/release.nix @@ -283,6 +283,7 @@ in rec { tests.docker-tools = callTestOnMatchingSystems ["x86_64-linux"] tests/docker-tools.nix {}; tests.docker-tools-overlay = callTestOnMatchingSystems ["x86_64-linux"] tests/docker-tools-overlay.nix {}; tests.docker-edge = callTestOnMatchingSystems ["x86_64-linux"] tests/docker-edge.nix {}; + tests.docker-preloader = callTestOnMatchingSystems ["x86_64-linux"] tests/docker-preloader.nix {}; tests.docker-registry = callTest tests/docker-registry.nix {}; tests.dovecot = callTest tests/dovecot.nix {}; tests.dnscrypt-proxy = callTestOnMatchingSystems ["x86_64-linux"] tests/dnscrypt-proxy.nix {}; @@ -300,7 +301,7 @@ in rec { tests.fsck = callTest tests/fsck.nix {}; tests.fwupd = callTest tests/fwupd.nix {}; tests.gdk-pixbuf = callTest tests/gdk-pixbuf.nix {}; - #tests.gitlab = callTest tests/gitlab.nix {}; + tests.gitlab = callTest tests/gitlab.nix {}; tests.gitolite = callTest tests/gitolite.nix {}; tests.gjs = callTest tests/gjs.nix {}; tests.gocd-agent = callTest tests/gocd-agent.nix {}; @@ -409,6 +410,7 @@ in rec { tests.slurm = callTest tests/slurm.nix {}; tests.smokeping = callTest tests/smokeping.nix {}; tests.snapper = callTest tests/snapper.nix {}; + tests.solr = callTest tests/solr.nix {}; #tests.statsd = callTest tests/statsd.nix {}; # statsd is broken: #45946 tests.strongswan-swanctl = callTest tests/strongswan-swanctl.nix {}; tests.sudo = callTest tests/sudo.nix {}; @@ -468,7 +470,7 @@ in rec { { services.httpd.enable = true; services.httpd.adminAddr = "foo@example.org"; services.postgresql.enable = true; - services.postgresql.package = pkgs.postgresql93; + services.postgresql.package = pkgs.postgresql_9_3; environment.systemPackages = [ pkgs.php ]; }); }; diff --git a/nixos/tests/ceph.nix b/nixos/tests/ceph.nix index dd45f0157b01..7408029c460e 100644 --- a/nixos/tests/ceph.nix +++ b/nixos/tests/ceph.nix @@ -10,9 +10,8 @@ import ./make-test.nix ({pkgs, ...}: rec { emptyDiskImages = [ 20480 20480 ]; vlans = [ 1 ]; }; - + networking = { - firewall.allowPing = true; useDHCP = false; interfaces.eth1.ipv4.addresses = pkgs.lib.mkOverride 0 [ { address = "192.168.1.1"; prefixLength = 24; } @@ -54,7 +53,7 @@ import ./make-test.nix ({pkgs, ...}: rec { }; }; }; - + testScript = { ... }: '' startAll; @@ -83,7 +82,7 @@ import ./make-test.nix ({pkgs, ...}: rec { # Can't check ceph status until a mon is up $aio->succeed("ceph -s | grep 'mon: 1 daemons'"); - + # Start the ceph-mgr daemon, it has no deps and hardly any setup $aio->mustSucceed( "ceph auth get-or-create mgr.aio mon 'allow profile mgr' osd 'allow *' mds 'allow *' > /var/lib/ceph/mgr/ceph-aio/keyring", diff --git a/nixos/tests/chromium.nix b/nixos/tests/chromium.nix index c341e83961a8..e5097609fb27 100644 --- a/nixos/tests/chromium.nix +++ b/nixos/tests/chromium.nix @@ -12,8 +12,10 @@ with pkgs.lib; mapAttrs (channel: chromiumPkg: makeTest rec { name = "chromium-${channel}"; - meta = with pkgs.stdenv.lib.maintainers; { - maintainers = [ aszlig ]; + meta = { + maintainers = with maintainers; [ aszlig ]; + # https://github.com/NixOS/hydra/issues/591#issuecomment-435125621 + inherit (chromiumPkg.meta) timeout; }; enableOCR = true; @@ -166,7 +168,7 @@ mapAttrs (channel: chromiumPkg: makeTest rec { my $clipboard = $machine->succeed(ru "${pkgs.xclip}/bin/xclip -o"); die "sandbox not working properly: $clipboard" - unless $clipboard =~ /namespace sandbox.*yes/mi + unless $clipboard =~ /layer 1 sandbox.*namespace/mi && $clipboard =~ /pid namespaces.*yes/mi && $clipboard =~ /network namespaces.*yes/mi && $clipboard =~ /seccomp.*sandbox.*yes/mi @@ -184,7 +186,7 @@ mapAttrs (channel: chromiumPkg: makeTest rec { my $clipboard = $machine->succeed(ru "${pkgs.xclip}/bin/xclip -o"); die "copying twice in a row does not work properly: $clipboard" - unless $clipboard =~ /namespace sandbox.*yes/mi + unless $clipboard =~ /layer 1 sandbox.*namespace/mi && $clipboard =~ /pid namespaces.*yes/mi && $clipboard =~ /network namespaces.*yes/mi && $clipboard =~ /seccomp.*sandbox.*yes/mi diff --git a/nixos/tests/cjdns.nix b/nixos/tests/cjdns.nix index ab5f8e0bcf3e..e03bb9882540 100644 --- a/nixos/tests/cjdns.nix +++ b/nixos/tests/cjdns.nix @@ -13,9 +13,6 @@ let # CJDNS output is incompatible with the XML log. systemd.services.cjdns.serviceConfig.StandardOutput = "null"; - #networking.firewall.enable = true; - networking.firewall.allowPing = true; - #networking.firewall.rejectPackets = true; }; in diff --git a/nixos/tests/containers-bridge.nix b/nixos/tests/containers-bridge.nix index bd8bd5dee9c8..777cf9a7e7f9 100644 --- a/nixos/tests/containers-bridge.nix +++ b/nixos/tests/containers-bridge.nix @@ -42,7 +42,6 @@ import ./make-test.nix ({ pkgs, ...} : { { services.httpd.enable = true; services.httpd.adminAddr = "foo@example.org"; networking.firewall.allowedTCPPorts = [ 80 ]; - networking.firewall.allowPing = true; }; }; diff --git a/nixos/tests/containers-extra_veth.nix b/nixos/tests/containers-extra_veth.nix index 8f874b3585dc..b4c48afe48ba 100644 --- a/nixos/tests/containers-extra_veth.nix +++ b/nixos/tests/containers-extra_veth.nix @@ -43,7 +43,6 @@ import ./make-test.nix ({ pkgs, ...} : { config = { networking.firewall.allowedTCPPorts = [ 80 ]; - networking.firewall.allowPing = true; }; }; diff --git a/nixos/tests/containers-ipv4.nix b/nixos/tests/containers-ipv4.nix index 4affe3d9d56d..5f83a33b1079 100644 --- a/nixos/tests/containers-ipv4.nix +++ b/nixos/tests/containers-ipv4.nix @@ -20,7 +20,6 @@ import ./make-test.nix ({ pkgs, ...} : { { services.httpd.enable = true; services.httpd.adminAddr = "foo@example.org"; networking.firewall.allowedTCPPorts = [ 80 ]; - networking.firewall.allowPing = true; system.stateVersion = "18.03"; }; }; diff --git a/nixos/tests/containers-ipv6.nix b/nixos/tests/containers-ipv6.nix index 7db389a18e72..5866e51b731d 100644 --- a/nixos/tests/containers-ipv6.nix +++ b/nixos/tests/containers-ipv6.nix @@ -25,7 +25,6 @@ import ./make-test.nix ({ pkgs, ...} : { { services.httpd.enable = true; services.httpd.adminAddr = "foo@example.org"; networking.firewall.allowedTCPPorts = [ 80 ]; - networking.firewall.allowPing = true; }; }; diff --git a/nixos/tests/containers-portforward.nix b/nixos/tests/containers-portforward.nix index be83f82445ed..d2dda926fc0e 100644 --- a/nixos/tests/containers-portforward.nix +++ b/nixos/tests/containers-portforward.nix @@ -28,7 +28,6 @@ import ./make-test.nix ({ pkgs, ...} : { { services.httpd.enable = true; services.httpd.adminAddr = "foo@example.org"; networking.firewall.allowedTCPPorts = [ 80 ]; - networking.firewall.allowPing = true; }; }; diff --git a/nixos/tests/containers-restart_networking.nix b/nixos/tests/containers-restart_networking.nix index aeb0a6e68e21..0fb3b591e9f9 100644 --- a/nixos/tests/containers-restart_networking.nix +++ b/nixos/tests/containers-restart_networking.nix @@ -10,7 +10,6 @@ let hostBridge = "br0"; config = { networking.firewall.enable = false; - networking.firewall.allowPing = true; networking.interfaces.eth0.ipv4.addresses = [ { address = "192.168.1.122"; prefixLength = 24; } ]; diff --git a/nixos/tests/docker-preloader.nix b/nixos/tests/docker-preloader.nix new file mode 100644 index 000000000000..eeedec9a392e --- /dev/null +++ b/nixos/tests/docker-preloader.nix @@ -0,0 +1,27 @@ +import ./make-test.nix ({ pkgs, ...} : { + name = "docker-preloader"; + meta = with pkgs.stdenv.lib.maintainers; { + maintainers = [ lewo ]; + }; + + nodes = { + docker = + { pkgs, ... }: + { + virtualisation.docker.enable = true; + virtualisation.dockerPreloader.images = [ pkgs.dockerTools.examples.nix pkgs.dockerTools.examples.bash ]; + + services.openssh.enable = true; + services.openssh.permitRootLogin = "yes"; + services.openssh.extraConfig = "PermitEmptyPasswords yes"; + users.extraUsers.root.password = ""; + }; + }; + testScript = '' + startAll; + + $docker->waitForUnit("sockets.target"); + $docker->succeed("docker run nix nix-store --version"); + $docker->succeed("docker run bash bash --version"); + ''; +}) diff --git a/nixos/tests/gitlab.nix b/nixos/tests/gitlab.nix index 3af2cbcd0988..53675c375e31 100644 --- a/nixos/tests/gitlab.nix +++ b/nixos/tests/gitlab.nix @@ -1,14 +1,18 @@ # This test runs gitlab and checks if it works -import ./make-test.nix ({ pkgs, ...} : { +import ./make-test.nix ({ pkgs, lib, ...} : with lib; { name = "gitlab"; meta = with pkgs.stdenv.lib.maintainers; { - maintainers = [ domenkozar offline ]; + maintainers = [ globin ]; }; nodes = { gitlab = { ... }: { - virtualisation.memorySize = 768; + virtualisation.memorySize = 4096; + systemd.services.gitlab.serviceConfig.Restart = mkForce "no"; + systemd.services.gitlab-workhorse.serviceConfig.Restart = mkForce "no"; + systemd.services.gitaly.serviceConfig.Restart = mkForce "no"; + systemd.services.gitlab-sidekiq.serviceConfig.Restart = mkForce "no"; services.nginx = { enable = true; @@ -19,10 +23,10 @@ import ./make-test.nix ({ pkgs, ...} : { }; }; - systemd.services.gitlab.serviceConfig.TimeoutStartSec = "10min"; services.gitlab = { enable = true; databasePassword = "dbPassword"; + initialRootPassword = "notproduction"; secrets = { secret = "secret"; otp = "otpsecret"; @@ -65,8 +69,12 @@ import ./make-test.nix ({ pkgs, ...} : { testScript = '' $gitlab->start(); + $gitlab->waitForUnit("gitaly.service"); + $gitlab->waitForUnit("gitlab-workhorse.service"); $gitlab->waitForUnit("gitlab.service"); $gitlab->waitForUnit("gitlab-sidekiq.service"); - $gitlab->waitUntilSucceeds("curl http://localhost:80/users/sign_in"); + $gitlab->waitForFile("/var/gitlab/state/tmp/sockets/gitlab.socket"); + $gitlab->waitUntilSucceeds("curl -sSf http://localhost/users/sign_in"); + $gitlab->succeed("${pkgs.sudo}/bin/sudo -u gitlab -H gitlab-rake gitlab:check 1>&2") ''; }) diff --git a/nixos/tests/home-assistant.nix b/nixos/tests/home-assistant.nix index 2d74b59bca46..0b3da0d59c68 100644 --- a/nixos/tests/home-assistant.nix +++ b/nixos/tests/home-assistant.nix @@ -74,7 +74,6 @@ in { print "$log\n"; # Check that no errors were logged - # The timer can get out of sync due to Hydra's load, so this error is ignored - $hass->fail("cat ${configDir}/home-assistant.log | grep -vF 'Timer got out of sync' | grep -qF ERROR"); + $hass->fail("cat ${configDir}/home-assistant.log | grep -qF ERROR"); ''; }) diff --git a/nixos/tests/kubernetes/dns.nix b/nixos/tests/kubernetes/dns.nix index 30e1acd255a0..f25ea5b9ed84 100644 --- a/nixos/tests/kubernetes/dns.nix +++ b/nixos/tests/kubernetes/dns.nix @@ -87,7 +87,7 @@ let # check if pods are running $machine1->waitUntilSucceeds("kubectl get pod redis | grep Running"); $machine1->waitUntilSucceeds("kubectl get pod probe | grep Running"); - $machine1->waitUntilSucceeds("kubectl get pods -n kube-system | grep 'kube-dns.*3/3'"); + $machine1->waitUntilSucceeds("kubectl get pods -n kube-system | grep 'coredns.*1/1'"); # check dns on host (dnsmasq) $machine1->succeed("host redis.default.svc.cluster.local"); @@ -111,7 +111,7 @@ let # check if pods are running $machine1->waitUntilSucceeds("kubectl get pod redis | grep Running"); $machine1->waitUntilSucceeds("kubectl get pod probe | grep Running"); - $machine1->waitUntilSucceeds("kubectl get pods -n kube-system | grep 'kube-dns.*3/3'"); + $machine1->waitUntilSucceeds("kubectl get pods -n kube-system | grep 'coredns.*1/1'"); # check dns on hosts (dnsmasq) $machine1->succeed("host redis.default.svc.cluster.local"); diff --git a/nixos/tests/nat.nix b/nixos/tests/nat.nix index 9c280fe8b5b6..04b4f0f045f0 100644 --- a/nixos/tests/nat.nix +++ b/nixos/tests/nat.nix @@ -11,7 +11,6 @@ import ./make-test.nix ({ pkgs, lib, withFirewall, withConntrackHelpers ? false, lib.mkMerge [ { virtualisation.vlans = [ 2 1 ]; networking.firewall.enable = withFirewall; - networking.firewall.allowPing = true; networking.nat.internalIPs = [ "192.168.1.0/24" ]; networking.nat.externalInterface = "eth1"; } @@ -33,7 +32,6 @@ import ./make-test.nix ({ pkgs, lib, withFirewall, withConntrackHelpers ? false, { pkgs, nodes, ... }: lib.mkMerge [ { virtualisation.vlans = [ 1 ]; - networking.firewall.allowPing = true; networking.defaultGateway = (pkgs.lib.head nodes.router.config.networking.interfaces.eth2.ipv4.addresses).address; } diff --git a/nixos/tests/networking.nix b/nixos/tests/networking.nix index 87a8c4c0e196..d1d4fd41dda6 100644 --- a/nixos/tests/networking.nix +++ b/nixos/tests/networking.nix @@ -17,7 +17,6 @@ let networking = { useDHCP = false; useNetworkd = networkd; - firewall.allowPing = true; firewall.checkReversePath = true; firewall.allowedUDPPorts = [ 547 ]; interfaces = mkOverride 0 (listToAttrs (flip map vlanIfs (n: @@ -86,7 +85,6 @@ let virtualisation.vlans = [ 1 2 ]; networking = { useNetworkd = networkd; - firewall.allowPing = true; useDHCP = false; defaultGateway = "192.168.1.1"; interfaces.eth1.ipv4.addresses = mkOverride 0 [ @@ -139,7 +137,6 @@ let virtualisation.vlans = [ 1 2 ]; networking = { useNetworkd = networkd; - firewall.allowPing = true; useDHCP = true; interfaces.eth1 = { ipv4.addresses = mkOverride 0 [ ]; @@ -194,7 +191,6 @@ let virtualisation.vlans = [ 1 2 ]; networking = { useNetworkd = networkd; - firewall.allowPing = true; useDHCP = false; interfaces.eth1 = { ipv4.addresses = mkOverride 0 [ ]; @@ -234,7 +230,6 @@ let virtualisation.vlans = [ 1 2 ]; networking = { useNetworkd = networkd; - firewall.allowPing = true; useDHCP = false; bonds.bond = { interfaces = [ "eth1" "eth2" ]; @@ -271,7 +266,6 @@ let virtualisation.vlans = [ vlan ]; networking = { useNetworkd = networkd; - firewall.allowPing = true; useDHCP = false; interfaces.eth1.ipv4.addresses = mkOverride 0 [ { inherit address; prefixLength = 24; } ]; @@ -285,7 +279,6 @@ let virtualisation.vlans = [ 1 2 ]; networking = { useNetworkd = networkd; - firewall.allowPing = true; useDHCP = false; bridges.bridge.interfaces = [ "eth1" "eth2" ]; interfaces.eth1.ipv4.addresses = mkOverride 0 [ ]; @@ -329,7 +322,6 @@ let # reverse path filtering rules for the macvlan interface seem # to be incorrect, causing the test to fail. Disable temporarily. firewall.checkReversePath = false; - firewall.allowPing = true; useDHCP = true; macvlans.macvlan.interface = "eth1"; interfaces.eth1.ipv4.addresses = mkOverride 0 [ ]; @@ -415,7 +407,6 @@ let #virtualisation.vlans = [ 1 ]; networking = { useNetworkd = networkd; - firewall.allowPing = true; useDHCP = false; vlans.vlan = { id = 1; diff --git a/nixos/tests/plasma5.nix b/nixos/tests/plasma5.nix index eb705536827e..788c8719c8d2 100644 --- a/nixos/tests/plasma5.nix +++ b/nixos/tests/plasma5.nix @@ -26,31 +26,20 @@ import ./make-test.nix ({ pkgs, ...} : services.xserver.displayManager.sddm.theme = "breeze-ocr-theme"; services.xserver.desktopManager.plasma5.enable = true; services.xserver.desktopManager.default = "plasma5"; + services.xserver.displayManager.sddm.autoLogin = { + enable = true; + user = "alice"; + }; virtualisation.memorySize = 1024; environment.systemPackages = [ sddm_theme ]; - - # fontconfig-penultimate-0.3.3 -> 0.3.4 broke OCR apparently, but no idea why. - nixpkgs.config.packageOverrides = superPkgs: { - fontconfig-penultimate = superPkgs.fontconfig-penultimate.override { - version = "0.3.3"; - sha256 = "1z76jbkb0nhf4w7fy647yyayqr4q02fgk6w58k0yi700p0m3h4c9"; - }; - }; }; - enableOCR = true; - testScript = { nodes, ... }: let user = nodes.machine.config.users.users.alice; xdo = "${pkgs.xdotool}/bin/xdotool"; in '' startAll; - # Wait for display manager to start - $machine->waitForText(qr/${user.description}/); - $machine->screenshot("sddm"); - - # Log in - $machine->sendChars("${user.password}\n"); + # wait for log in $machine->waitForFile("/home/alice/.Xauthority"); $machine->succeed("xauth merge ~alice/.Xauthority"); diff --git a/nixos/tests/postgis.nix b/nixos/tests/postgis.nix index f8b63c5b6a27..49be0672a8e5 100644 --- a/nixos/tests/postgis.nix +++ b/nixos/tests/postgis.nix @@ -9,7 +9,7 @@ import ./make-test.nix ({ pkgs, ...} : { { pkgs, ... }: { - services.postgresql = let mypg = pkgs.postgresql100; in { + services.postgresql = let mypg = pkgs.postgresql_11; in { enable = true; package = mypg; extraPlugins = [ (pkgs.postgis.override { postgresql = mypg; }) ]; diff --git a/nixos/tests/quagga.nix b/nixos/tests/quagga.nix index 0ff14a21584a..6aee7ea57f03 100644 --- a/nixos/tests/quagga.nix +++ b/nixos/tests/quagga.nix @@ -66,7 +66,6 @@ import ./make-test.nix ({ pkgs, ... }: virtualisation.vlans = [ 3 ]; networking.defaultGateway = ifAddr nodes.router2 "eth1"; networking.firewall.allowedTCPPorts = [ 80 ]; - networking.firewall.allowPing = true; services.httpd.enable = true; services.httpd.adminAddr = "foo@example.com"; }; diff --git a/nixos/tests/rspamd.nix b/nixos/tests/rspamd.nix index a12622b6aa0b..a744760412d5 100644 --- a/nixos/tests/rspamd.nix +++ b/nixos/tests/rspamd.nix @@ -27,7 +27,7 @@ let $machine->succeed("id \"rspamd\" >/dev/null"); ${checkSocket "/run/rspamd/rspamd.sock" "rspamd" "rspamd" "660" } sleep 10; - $machine->log($machine->succeed("cat /etc/rspamd.conf")); + $machine->log($machine->succeed("cat /etc/rspamd/rspamd.conf")); $machine->log($machine->succeed("systemctl cat rspamd.service")); $machine->log($machine->succeed("curl http://localhost:11334/auth")); $machine->log($machine->succeed("curl http://127.0.0.1:11334/auth")); @@ -55,7 +55,7 @@ in $machine->waitForFile("/run/rspamd.sock"); ${checkSocket "/run/rspamd.sock" "root" "root" "600" } ${checkSocket "/run/rspamd-worker.sock" "root" "root" "666" } - $machine->log($machine->succeed("cat /etc/rspamd.conf")); + $machine->log($machine->succeed("cat /etc/rspamd/rspamd.conf")); $machine->log($machine->succeed("rspamc -h /run/rspamd-worker.sock stat")); $machine->log($machine->succeed("curl --unix-socket /run/rspamd-worker.sock http://localhost/ping")); ''; @@ -86,9 +86,101 @@ in $machine->waitForFile("/run/rspamd.sock"); ${checkSocket "/run/rspamd.sock" "root" "root" "600" } ${checkSocket "/run/rspamd-worker.sock" "root" "root" "666" } - $machine->log($machine->succeed("cat /etc/rspamd.conf")); + $machine->log($machine->succeed("cat /etc/rspamd/rspamd.conf")); $machine->log($machine->succeed("rspamc -h /run/rspamd-worker.sock stat")); $machine->log($machine->succeed("curl --unix-socket /run/rspamd-worker.sock http://localhost/ping")); ''; }; + customLuaRules = makeTest { + name = "rspamd-custom-lua-rules"; + machine = { + environment.etc."tests/no-muh.eml".text = '' + From: Sheep1<bah@example.com> + To: Sheep2<mah@example.com> + Subject: Evil cows + + I find cows to be evil don't you? + ''; + environment.etc."tests/muh.eml".text = '' + From: Cow<cow@example.com> + To: Sheep2<mah@example.com> + Subject: Evil cows + + Cows are majestic creatures don't Muh agree? + ''; + services.rspamd = { + enable = true; + locals = { + "antivirus.conf" = mkIf false { text = '' + clamav { + action = "reject"; + symbol = "CLAM_VIRUS"; + type = "clamav"; + log_clean = true; + servers = "/run/clamav/clamd.ctl"; + } + '';}; + "redis.conf" = { + enable = false; + text = '' + servers = "127.0.0.1"; + ''; + }; + "groups.conf".text = '' + group "cows" { + symbol { + NO_MUH = { + weight = 1.0; + description = "Mails should not muh"; + } + } + } + ''; + }; + localLuaRules = pkgs.writeText "rspamd.local.lua" '' + local rspamd_logger = require "rspamd_logger" + rspamd_config.NO_MUH = { + callback = function (task) + local parts = task:get_text_parts() + if parts then + for _,part in ipairs(parts) do + local content = tostring(part:get_content()) + rspamd_logger.infox(rspamd_config, 'Found content %s', content) + local found = string.find(content, "Muh"); + rspamd_logger.infox(rspamd_config, 'Found muh %s', tostring(found)) + if found then + return true + end + end + end + return false + end, + score = 5.0, + description = 'Allow no cows', + group = "cows", + } + rspamd_logger.infox(rspamd_config, 'Work dammit!!!') + ''; + }; + }; + testScript = '' + ${initMachine} + $machine->waitForOpenPort(11334); + $machine->log($machine->succeed("cat /etc/rspamd/rspamd.conf")); + $machine->log($machine->succeed("cat /etc/rspamd/rspamd.local.lua")); + $machine->log($machine->succeed("cat /etc/rspamd/local.d/groups.conf")); + # Verify that redis.conf was not written + $machine->fail("cat /etc/rspamd/local.d/redis.conf >&2"); + # Verify that antivirus.conf was not written + $machine->fail("cat /etc/rspamd/local.d/antivirus.conf >&2"); + ${checkSocket "/run/rspamd/rspamd.sock" "rspamd" "rspamd" "660" } + $machine->log($machine->succeed("curl --unix-socket /run/rspamd/rspamd.sock http://localhost/ping")); + $machine->log($machine->succeed("rspamc -h 127.0.0.1:11334 stat")); + $machine->log($machine->succeed("cat /etc/tests/no-muh.eml | rspamc -h 127.0.0.1:11334")); + $machine->log($machine->succeed("cat /etc/tests/muh.eml | rspamc -h 127.0.0.1:11334 symbols")); + $machine->waitUntilSucceeds("journalctl -u rspamd | grep -i muh >&2"); + $machine->log($machine->fail("cat /etc/tests/no-muh.eml | rspamc -h 127.0.0.1:11334 symbols | grep NO_MUH")); + $machine->log($machine->succeed("cat /etc/tests/muh.eml | rspamc -h 127.0.0.1:11334 symbols | grep NO_MUH")); + ''; + }; } diff --git a/nixos/tests/rsyslogd.nix b/nixos/tests/rsyslogd.nix index 4836419f0c2f..969d59e0f2c2 100644 --- a/nixos/tests/rsyslogd.nix +++ b/nixos/tests/rsyslogd.nix @@ -1,10 +1,11 @@ { system ? builtins.currentSystem }: with import ../lib/testing.nix { inherit system; }; +with pkgs.lib; { test1 = makeTest { name = "rsyslogd-test1"; - meta.maintainers = [ lib.maintainers.aanderse ]; + meta.maintainers = [ maintainers.aanderse ]; machine = { config, pkgs, ... }: @@ -21,7 +22,7 @@ with import ../lib/testing.nix { inherit system; }; test2 = makeTest { name = "rsyslogd-test2"; - meta.maintainers = [ lib.maintainers.aanderse ]; + meta.maintainers = [ maintainers.aanderse ]; machine = { config, pkgs, ... }: diff --git a/nixos/tests/slurm.nix b/nixos/tests/slurm.nix index 60f44c3c8459..7f9c266cbff6 100644 --- a/nixos/tests/slurm.nix +++ b/nixos/tests/slurm.nix @@ -1,22 +1,27 @@ -import ./make-test.nix ({ ... }: -let mungekey = "mungeverryweakkeybuteasytointegratoinatest"; +import ./make-test.nix ({ lib, ... }: +let + mungekey = "mungeverryweakkeybuteasytointegratoinatest"; + slurmconfig = { controlMachine = "control"; - nodeName = '' - control - NodeName=node[1-3] CPUs=1 State=UNKNOWN + nodeName = [ "node[1-3] CPUs=1 State=UNKNOWN" ]; + partitionName = [ "debug Nodes=node[1-3] Default=YES MaxTime=INFINITE State=UP" ]; + extraConfig = '' + AccountingStorageHost=dbd + AccountingStorageType=accounting_storage/slurmdbd ''; - partitionName = "debug Nodes=node[1-3] Default=YES MaxTime=INFINITE State=UP"; }; in { name = "slurm"; + meta.maintainers = [ lib.maintainers.markuskowa ]; + nodes = let computeNode = { ...}: { - # TODO slrumd port and slurmctld port should be configurations and + # TODO slurmd port and slurmctld port should be configurations and # automatically allowed by the firewall. networking.firewall.enable = false; services.slurm = { @@ -43,6 +48,24 @@ in { } // slurmconfig; }; + dbd = + { pkgs, ... } : + { + networking.firewall.enable = false; + services.slurm.dbdserver = { + enable = true; + }; + services.mysql = { + enable = true; + package = pkgs.mysql; + ensureDatabases = [ "slurm_acct_db" ]; + ensureUsers = [{ + ensurePermissions = { "slurm_acct_db.*" = "ALL PRIVILEGES"; }; + name = "slurm"; + }]; + }; + }; + node1 = computeNode; node2 = computeNode; node3 = computeNode; @@ -54,7 +77,7 @@ in { startAll; # Set up authentification across the cluster - foreach my $node (($submit,$control,$node1,$node2,$node3)) + foreach my $node (($submit,$control,$dbd,$node1,$node2,$node3)) { $node->waitForUnit("default.target"); @@ -63,10 +86,22 @@ in { $node->succeed("chmod 0400 /etc/munge/munge.key"); $node->succeed("chown munge:munge /etc/munge/munge.key"); $node->succeed("systemctl restart munged"); - } + + $node->waitForUnit("munged"); + }; # Restart the services since they have probably failed due to the munge init # failure + subtest "can_start_slurmdbd", sub { + $dbd->succeed("systemctl restart slurmdbd"); + $dbd->waitForUnit("slurmdbd.service"); + }; + + # there needs to be an entry for the current + # cluster in the database before slurmctld is restarted + subtest "add_account", sub { + $control->succeed("sacctmgr -i add cluster default"); + }; subtest "can_start_slurmctld", sub { $control->succeed("systemctl restart slurmctld"); @@ -81,12 +116,17 @@ in { } }; - # Test that the cluster work and can distribute jobs; + # Test that the cluster works and can distribute jobs; subtest "run_distributed_command", sub { # Run `hostname` on 3 nodes of the partition (so on all the 3 nodes). # The output must contain the 3 different names $submit->succeed("srun -N 3 hostname | sort | uniq | wc -l | xargs test 3 -eq"); }; + + subtest "check_slurm_dbd", sub { + # find the srun job from above in the database + $submit->succeed("sacct | grep hostname"); + }; ''; }) diff --git a/nixos/tests/solr.nix b/nixos/tests/solr.nix new file mode 100644 index 000000000000..9ba3863411ea --- /dev/null +++ b/nixos/tests/solr.nix @@ -0,0 +1,47 @@ +import ./make-test.nix ({ pkgs, lib, ... }: +{ + name = "solr"; + meta.maintainers = [ lib.maintainers.aanderse ]; + + machine = + { config, pkgs, ... }: + { + # Ensure the virtual machine has enough memory for Solr to avoid the following error: + # + # OpenJDK 64-Bit Server VM warning: + # INFO: os::commit_memory(0x00000000e8000000, 402653184, 0) + # failed; error='Cannot allocate memory' (errno=12) + # + # There is insufficient memory for the Java Runtime Environment to continue. + # Native memory allocation (mmap) failed to map 402653184 bytes for committing reserved memory. + virtualisation.memorySize = 2000; + + services.solr.enable = true; + }; + + testScript = '' + startAll; + + $machine->waitForUnit('solr.service'); + $machine->waitForOpenPort('8983'); + $machine->succeed('curl --fail http://localhost:8983/solr/'); + + # adapted from pkgs.solr/examples/films/README.txt + $machine->succeed('sudo -u solr solr create -c films'); + $machine->succeed(q(curl http://localhost:8983/solr/films/schema -X POST -H 'Content-type:application/json' --data-binary '{ + "add-field" : { + "name":"name", + "type":"text_general", + "multiValued":false, + "stored":true + }, + "add-field" : { + "name":"initial_release_date", + "type":"pdate", + "stored":true + } + }')) =~ /"status":0/ or die; + $machine->succeed('sudo -u solr post -c films ${pkgs.solr}/example/films/films.json'); + $machine->succeed('curl http://localhost:8983/solr/films/query?q=name:batman') =~ /"name":"Batman Begins"/ or die; + ''; +}) diff --git a/pkgs/applications/altcoins/default.nix b/pkgs/applications/altcoins/default.nix index 87f5d0be68a3..b24dbb8f90a5 100644 --- a/pkgs/applications/altcoins/default.nix +++ b/pkgs/applications/altcoins/default.nix @@ -90,5 +90,5 @@ rec { parity-beta = callPackage ./parity/beta.nix { }; parity-ui = callPackage ./parity-ui { }; - particl-core = callPackage ./particl/particl-core.nix { boost = boost165; miniupnpc = miniupnpc_2; }; + particl-core = callPackage ./particl/particl-core.nix { miniupnpc = miniupnpc_2; }; } diff --git a/pkgs/applications/altcoins/particl/particl-core.nix b/pkgs/applications/altcoins/particl/particl-core.nix index a06f373683a9..d3b20ef2ea36 100644 --- a/pkgs/applications/altcoins/particl/particl-core.nix +++ b/pkgs/applications/altcoins/particl/particl-core.nix @@ -10,31 +10,40 @@ , zeromq , zlib , unixtools +, python3 }: with stdenv.lib; stdenv.mkDerivation rec { name = "particl-core-${version}"; - version = "0.16.2.0"; + version = "0.17.0.2"; src = fetchurl { url = "https://github.com/particl/particl-core/archive/v${version}.tar.gz"; - sha256 = "1d2vvg7avlhsg0rcpd5pbzafnk1w51a2y29xjjkpafi6iqs2l617"; + sha256 = "0bkxdayl0jrfhgz8qzqqpwzv0yavz3nwsn6c8k003jnbcw65fkhx"; }; nativeBuildInputs = [ pkgconfig autoreconfHook ]; - buildInputs = [ - openssl db48 boost zlib miniupnpc libevent zeromq - unixtools.hexdump + buildInputs = [ openssl db48 boost zlib miniupnpc libevent zeromq unixtools.hexdump python3 ]; + + configureFlags = [ + "--disable-bench" + "--with-boost-libdir=${boost.out}/lib" + ] ++ optionals (!doCheck) [ + "--enable-tests=no" ]; - configureFlags = [ "--with-boost-libdir=${boost.out}/lib" ]; + # Always check during Hydra builds + doCheck = true; + preCheck = "patchShebangs test"; + enableParallelBuilding = true; meta = { description = "Privacy-Focused Marketplace & Decentralized Application Platform"; longDescription= '' An open source, decentralized privacy platform built for global person to person eCommerce. + RPC daemon and CLI client only. ''; homepage = https://particl.io/; maintainers = with maintainers; [ demyanrogozhin ]; diff --git a/pkgs/applications/audio/avldrums-lv2/default.nix b/pkgs/applications/audio/avldrums-lv2/default.nix new file mode 100644 index 000000000000..40fb0c6d9e15 --- /dev/null +++ b/pkgs/applications/audio/avldrums-lv2/default.nix @@ -0,0 +1,30 @@ +{ stdenv, fetchFromGitHub, pkgconfig, pango, cairo, libGLU, lv2 }: + +stdenv.mkDerivation rec { + name = "${pname}-${version}"; + pname = "avldrums.lv2"; + version = "0.3.0"; + + src = fetchFromGitHub { + owner = "x42"; + repo = pname; + rev = "v${version}"; + sha256 = "0w51gdshq2i5bix2x5l3g3gnycy84nlzf5sj0jkrw0zrnbk6ghwg"; + fetchSubmodules = true; + }; + + installFlags = "PREFIX=$(out)"; + + nativeBuildInputs = [ pkgconfig ]; + buildInputs = [ + pango cairo libGLU lv2 + ]; + + meta = with stdenv.lib; { + description = "Dedicated AVLDrumkits LV2 Plugin"; + homepage = http://x42-plugins.com/x42/x42-avldrums; + license = licenses.gpl2; + maintainers = [ maintainers.magnetophon ]; + platforms = [ "i686-linux" "x86_64-linux" ]; + }; +} diff --git a/pkgs/applications/audio/axoloti/default.nix b/pkgs/applications/audio/axoloti/default.nix index 274233167bd8..e3f1b6acf874 100644 --- a/pkgs/applications/audio/axoloti/default.nix +++ b/pkgs/applications/audio/axoloti/default.nix @@ -1,5 +1,6 @@ { stdenv, fetchFromGitHub, fetchurl, makeWrapper, unzip -, gnumake, gcc-arm-embedded, dfu-util-axoloti, jdk, ant, libfaketime }: +, gnumake, gcc-arm-embedded, binutils-arm-embedded +, dfu-util-axoloti, jdk, ant, libfaketime }: stdenv.mkDerivation rec { version = "1.0.12-2"; @@ -20,7 +21,15 @@ stdenv.mkDerivation rec { sha256 = "0lb5s8pkj80mqhsy47mmq0lqk34s2a2m3xagzihalvabwd0frhlj"; }; - buildInputs = [ makeWrapper unzip gcc-arm-embedded dfu-util-axoloti jdk ant libfaketime ]; + nativeBuildInputs = [ + makeWrapper + unzip + gcc-arm-embedded + binutils-arm-embedded + dfu-util-axoloti + ant + ]; + buildInputs = [jdk libfaketime ]; patchPhase = '' unzip ${chibios} @@ -31,15 +40,6 @@ stdenv.mkDerivation rec { substituteInPlace "chibios/os/various/shell.c" \ --replace "#ifdef __DATE__" "#if 0" - # Hardcode full path to compiler tools - for f in "firmware/Makefile.patch" \ - "firmware/Makefile" \ - "firmware/flasher/Makefile" \ - "firmware/mounter/Makefile"; do - substituteInPlace "$f" \ - --replace "arm-none-eabi-" "${gcc-arm-embedded}/bin/arm-none-eabi-" - done - # Hardcode path to "make" for f in "firmware/compile_firmware_linux.sh" \ "firmware/compile_patch_linux.sh"; do diff --git a/pkgs/applications/audio/cmusfm/default.nix b/pkgs/applications/audio/cmusfm/default.nix new file mode 100644 index 000000000000..e528e9699a73 --- /dev/null +++ b/pkgs/applications/audio/cmusfm/default.nix @@ -0,0 +1,36 @@ +{ stdenv, fetchFromGitHub, autoreconfHook, pkgconfig, curl, libnotify, gdk_pixbuf }: + +stdenv.mkDerivation rec { + version = "2018-10-11"; + name = "cmusfm-unstable-${version}"; + src = fetchFromGitHub { + owner = "Arkq"; + repo = "cmusfm"; + rev = "ad2fd0aad3f4f1a25add1b8c2f179e8859885873"; + sha256 = "0wpwdwgyrp64nvwc6shy0n387p31j6aw6cnmfi9x2y1jhl5hbv6b"; + }; + # building + configureFlags = [ "--enable-libnotify" ]; + nativeBuildInputs = [ autoreconfHook pkgconfig ]; + buildInputs = [ curl libnotify gdk_pixbuf ]; + + meta = with stdenv.lib; { + description = "Last.fm and Libre.fm standalone scrobbler for the cmus music player"; + longDescription = '' + Features: + + Listening now notification support + + Off-line played track cache for later submission + + POSIX ERE-based file name parser + + Desktop notification support (optionally) + + Customizable scrobbling service + + Small memory footprint + Configuration: + + run `cmusfm init` to generate configuration file under ~/.config/cmus/cmusfm.conf + + Inside cmus run `:set status_display_program=cmusfm` to set up cmusfm + ''; + homepage = https://github.com/Arkq/cmusfm/; + maintainers = with stdenv.lib.maintainers; [ CharlesHD ]; + license = licenses.gpl3Plus; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/applications/audio/gxplugins-lv2/default.nix b/pkgs/applications/audio/gxplugins-lv2/default.nix new file mode 100644 index 000000000000..e7e4744eea2f --- /dev/null +++ b/pkgs/applications/audio/gxplugins-lv2/default.nix @@ -0,0 +1,29 @@ +{ stdenv, fetchFromGitHub, xorg, xproto, cairo, lv2, pkgconfig }: + +stdenv.mkDerivation rec { + name = "${pname}-${version}"; + pname = "GxPlugins.lv2"; + version = "0.5"; + + src = fetchFromGitHub { + owner = "brummer10"; + repo = pname; + rev = "v${version}"; + sha256 = "16r5bj7w726d9327flg530fn0bli4crkxjss7i56yhb1bsi39mbv"; + fetchSubmodules = true; + }; + + nativeBuildInputs = [ pkgconfig ]; + buildInputs = [ + xorg.libX11 xproto cairo lv2 + ]; + + installFlags = [ "INSTALL_DIR=$(out)/lib/lv2" ]; + + meta = with stdenv.lib; { + homepage = https://github.com/brummer10/GxPlugins.lv2; + description = "A set of extra lv2 plugins from the guitarix project"; + maintainers = [ maintainers.magnetophon ]; + license = licenses.gpl3; + }; +} diff --git a/pkgs/applications/audio/hybridreverb2/default.nix b/pkgs/applications/audio/hybridreverb2/default.nix new file mode 100644 index 000000000000..19aac1bd1e95 --- /dev/null +++ b/pkgs/applications/audio/hybridreverb2/default.nix @@ -0,0 +1,49 @@ +{ stdenv, fetchFromGitHub, fetchzip, cmake, pkgconfig, lv2, alsaLib, libjack2, + freetype, libX11, gtk3, pcre, libpthreadstubs, libXdmcp, libxkbcommon, + epoxy, at-spi2-core, dbus, curl, fftwFloat }: + +let + pname = "HybridReverb2"; + version = "2.1.1"; + owner = "jpcima"; + DBversion = "1.0.0"; +in + +stdenv.mkDerivation rec { + name = "${pname}-${version}"; + + impulseDB = fetchzip { + url = "https://github.com/${owner}/${pname}-impulse-response-database/archive/v${DBversion}.zip"; + sha256 = "1hlfxbbkahm1k2sk3c3n2mjaz7k80ky3r55xil8nfbvbv0qan89z"; + }; + + src = fetchFromGitHub { + inherit owner; + repo = pname; + rev = "v${version}"; + sha256 = "15mba9qvlis0qrklr50wp3jdysvmk33m7pvclp0k1is9pirj97cb"; + fetchSubmodules = true; + }; + + nativeBuildInputs = [ pkgconfig cmake ]; + buildInputs = [ lv2 alsaLib libjack2 freetype libX11 gtk3 pcre + libpthreadstubs libXdmcp libxkbcommon epoxy at-spi2-core dbus curl fftwFloat ]; + + cmakeFlags = [ + "-DHybridReverb2_AdvancedJackStandalone=ON" + "-DHybridReverb2_UseLocalDatabase=ON" + ]; + + postInstall = '' + mkdir -p $out/share/${pname}/ + cp -r ${impulseDB}/* $out/share/${pname}/ + ''; + + meta = with stdenv.lib; { + homepage = http://www2.ika.ruhr-uni-bochum.de/HybridReverb2; + description = "Reverb effect using hybrid impulse convolution"; + license = licenses.gpl2Plus; + maintainers = [ maintainers.magnetophon ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/audio/lollypop/default.nix b/pkgs/applications/audio/lollypop/default.nix index 034d2059283d..8df2be1a0391 100644 --- a/pkgs/applications/audio/lollypop/default.nix +++ b/pkgs/applications/audio/lollypop/default.nix @@ -4,7 +4,7 @@ , gobjectIntrospection, wrapGAppsHook }: python3.pkgs.buildPythonApplication rec { - version = "0.9.607"; + version = "0.9.610"; name = "lollypop-${version}"; format = "other"; @@ -14,7 +14,7 @@ python3.pkgs.buildPythonApplication rec { url = "https://gitlab.gnome.org/World/lollypop"; rev = "refs/tags/${version}"; fetchSubmodules = true; - sha256 = "04giwp4i7j1qad41fiqlb8s3w03f1ww0p2mhi8n162sajnflr1rd"; + sha256 = "0nn4cjw0c2ysd3y2a7l08ybcd21v993wsz99f7w0881jhws3q5p4"; }; nativeBuildInputs = with python3.pkgs; [ diff --git a/pkgs/applications/audio/pulseaudio-modules-bt/default.nix b/pkgs/applications/audio/pulseaudio-modules-bt/default.nix index b377db65c0c9..cb267d8bbb66 100644 --- a/pkgs/applications/audio/pulseaudio-modules-bt/default.nix +++ b/pkgs/applications/audio/pulseaudio-modules-bt/default.nix @@ -5,6 +5,7 @@ , pkgconfig , ffmpeg_4 , patchelf +, fdk_aac , libtool , cmake , bluez @@ -22,13 +23,13 @@ let in stdenv.mkDerivation rec { name = "pulseaudio-modules-bt-${version}"; - version = "unstable-2018-10-16"; + version = "unstable-2018-11-01"; src = fetchFromGitHub { owner = "EHfive"; repo = "pulseaudio-modules-bt"; - rev = "552c2b48c0cc7dd44d0746b261f7c7d5559e8e30"; - sha256 = "052jb1hjx1in7bafx4zpn78s7r6f2y7djriwi36dzqy9wmalmyjy"; + rev = "a2f62fcaa702bb883c07d074ebca8d7135520ab8"; + sha256 = "1fhg7q9064zikhy0xxldn4fvh49pc47mgikcbd9yhsk66gcn6zj3"; fetchSubmodules = true; }; @@ -45,6 +46,7 @@ in stdenv.mkDerivation rec { buildInputs = [ pulseaudio ffmpeg_4 + fdk_aac libtool bluez dbus @@ -72,7 +74,7 @@ in stdenv.mkDerivation rec { meta = with stdenv.lib; { homepage = https://github.com/EHfive/pulseaudio-modules-bt; - description = "SBC, Sony LDAC codec (A2DP Audio) support for Pulseaudio"; + description = "LDAC, aptX, aptX HD, AAC codecs (A2DP Audio) support for Linux PulseAudio"; platforms = platforms.linux; license = licenses.mit; maintainers = with maintainers; [ adisbladis ]; diff --git a/pkgs/applications/audio/pulseaudio-modules-bt/fix-install-path.patch b/pkgs/applications/audio/pulseaudio-modules-bt/fix-install-path.patch index 2b4ff86ab71b..e500d1fb1333 100644 --- a/pkgs/applications/audio/pulseaudio-modules-bt/fix-install-path.patch +++ b/pkgs/applications/audio/pulseaudio-modules-bt/fix-install-path.patch @@ -1,11 +1,20 @@ diff --git a/CMakeLists.txt b/CMakeLists.txt -index 0f5baa0..1f35cce 100644 +index d869979..185144d 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt -@@ -122,5 +121,4 @@ INSTALL(TARGETS +@@ -143,13 +143,13 @@ INSTALL(TARGETS module-bluez5-device module-bluetooth-discover module-bluetooth-policy - LIBRARY DESTINATION ${PulseAudio_modlibexecdir}) -- + LIBRARY DESTINATION ${CMAKE_INSTALL_PREFIX}/lib/pulse-${PulseAudio_VERSION}/modules/) + + if(NOT ${HAVE_SYSTEM_LDAC}) + + INSTALL(TARGETS + ldacBT_enc + ldacBT_abr +- LIBRARY DESTINATION ${PulseAudio_modlibexecdir}) ++ LIBRARY DESTINATION ${CMAKE_INSTALL_PREFIX}/lib/pulse-${PulseAudio_VERSION}/modules/) + + endif() diff --git a/pkgs/applications/audio/spotify/default.nix b/pkgs/applications/audio/spotify/default.nix index cbcf5220564b..15aaab40a678 100644 --- a/pkgs/applications/audio/spotify/default.nix +++ b/pkgs/applications/audio/spotify/default.nix @@ -5,14 +5,14 @@ let # TO UPDATE: just execute the ./update.sh script (won't do anything if there is no update) # "rev" decides what is actually being downloaded - version = "1.0.83.316.ge96b6e67-5"; + version = "1.0.93.242.gc2341a27-15"; # To get the latest stable revision: # curl -H 'X-Ubuntu-Series: 16' 'https://api.snapcraft.io/api/v1/snaps/details/spotify?channel=stable' | jq '.download_url,.version,.last_updated' # To get general information: # curl -H 'Snap-Device-Series: 16' 'https://api.snapcraft.io/v2/snaps/info/spotify' | jq '.' # More examples of api usage: # https://github.com/canonical-websites/snapcraft.io/blob/master/webapp/publisher/snaps/views.py - rev = "17"; + rev = "24"; deps = [ @@ -65,7 +65,7 @@ stdenv.mkDerivation { # https://community.spotify.com/t5/Desktop-Linux/Redistribute-Spotify-on-Linux-Distributions/td-p/1695334 src = fetchurl { url = "https://api.snapcraft.io/api/v1/snaps/download/pOBIoZ2LrCB3rDohMxoYGnbN14EHOgD7_${rev}.snap"; - sha512 = "19bbr4142shsl4qrikf48vq7kyrd4k4jbsada13qxicxps46a9bx51vjm2hkijqv739c1gdkgzwx7llyk95z26lhrz53shm2n5ij8xi"; + sha512 = "920d55b3dcad4ac6acd9bc73c8ad8eb1668327a175da465ce3d8bba2430da47aaefa5218659315fab43b5182611eb03047d4e2679c1345c57380b7def7a1212d"; }; buildInputs = [ squashfsTools makeWrapper ]; diff --git a/pkgs/applications/audio/vocal/default.nix b/pkgs/applications/audio/vocal/default.nix index 97f59ee5f94f..af8b3ac93949 100644 --- a/pkgs/applications/audio/vocal/default.nix +++ b/pkgs/applications/audio/vocal/default.nix @@ -1,9 +1,9 @@ -{ stdenv, fetchFromGitHub, cmake, ninja, pkgconfig, vala, gtk3, libxml2, granite, webkitgtk, clutter-gtk +{ stdenv, fetchFromGitHub, cmake, ninja, pkgconfig, vala_0_40, gtk3, libxml2, granite, webkitgtk, clutter-gtk , clutter-gst, libunity, libnotify, sqlite, gst_all_1, libsoup, json-glib, gnome3, gobjectIntrospection, wrapGAppsHook }: stdenv.mkDerivation rec { pname = "vocal"; - version = "2.2.0"; + version = "2.3.0"; name = "${pname}-${version}"; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { owner = "needle-and-thread"; repo = pname; rev = version; - sha256 = "09cm4azyaa9fmfymygf25gf0klpm5p04k6bc1i90jhw0f1im8sgl"; + sha256 = "1wkkyai14in4yk3q4qq23wk3l49px2xi8z819y3glna236qsq6qp"; }; nativeBuildInputs = [ @@ -20,13 +20,14 @@ stdenv.mkDerivation rec { libxml2 ninja pkgconfig - vala + vala_0_40 # should be `elementary.vala` when elementary attribute set is merged wrapGAppsHook ]; buildInputs = with gst_all_1; [ clutter-gst clutter-gtk + gnome3.defaultIconTheme # should be `elementary.defaultIconTheme`when elementary attribute set is merged gnome3.libgee granite gst-plugins-base diff --git a/pkgs/applications/audio/wolf-shaper/default.nix b/pkgs/applications/audio/wolf-shaper/default.nix new file mode 100644 index 000000000000..562fdc1be8b6 --- /dev/null +++ b/pkgs/applications/audio/wolf-shaper/default.nix @@ -0,0 +1,47 @@ +{ stdenv, fetchFromGitHub , libjack2, lv2, xorg, liblo, libGL, libXcursor, pkgconfig }: + +stdenv.mkDerivation rec { + name = "wolf-shaper-${version}"; + version = "0.1.6"; + + src = fetchFromGitHub { + owner = "pdesaulniers"; + repo = "wolf-shaper"; + rev = "v${version}"; + sha256 = "01h5dm1nrr0i54ancwznr7wn4vpw08dw0b69v3axy32r5j7plw6s"; + fetchSubmodules = true; + }; + + nativeBuildInputs = [ pkgconfig ]; + buildInputs = [ libjack2 lv2 xorg.libX11 liblo libGL libXcursor ]; + + makeFlags = [ + "BUILD_LV2=true" + "BUILD_DSSI=true" + "BUILD_VST2=true" + "BUILD_JACK=true" + ]; + + patchPhase = '' + patchShebangs ./dpf/utils/generate-ttl.sh + ''; + + installPhase = '' + mkdir -p $out/lib/lv2 + mkdir -p $out/lib/dssi + mkdir -p $out/lib/vst + mkdir -p $out/bin/ + cp -r bin/wolf-shaper.lv2 $out/lib/lv2/ + cp -r bin/wolf-shaper-dssi* $out/lib/dssi/ + cp -r bin/wolf-shaper-vst.so $out/lib/vst/ + cp -r bin/wolf-shaper $out/bin/ + ''; + + meta = with stdenv.lib; { + homepage = https://pdesaulniers.github.io/wolf-shaper/; + description = "Waveshaper plugin with spline-based graph editor"; + license = licenses.gpl3; + maintainers = [ maintainers.magnetophon ]; + platforms = [ "i686-linux" "x86_64-linux" ]; + }; +} diff --git a/pkgs/applications/display-managers/lightdm-mini-greeter/default.nix b/pkgs/applications/display-managers/lightdm-mini-greeter/default.nix index ef80aa00563f..91446f73507e 100644 --- a/pkgs/applications/display-managers/lightdm-mini-greeter/default.nix +++ b/pkgs/applications/display-managers/lightdm-mini-greeter/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "lightdm-mini-greeter-${version}"; - version = "0.3.2"; + version = "0.3.4"; src = fetchFromGitHub { owner = "prikhi"; repo = "lightdm-mini-greeter"; rev = version; - sha256 = "1g3lrh034w38hiq96b0xmghmlf87hcycwdh06dwkdksr0hl08wxy"; + sha256 = "1qi0bsqi8z2zv3303ww0kd7bciz6qx8na5bkvgrqlwyvq31czai5"; }; nativeBuildInputs = [ autoreconfHook pkgconfig ]; @@ -26,7 +26,7 @@ stdenv.mkDerivation rec { description = "A minimal, configurable, single-user GTK3 LightDM greeter"; homepage = https://github.com/prikhi/lightdm-mini-greeter; license = licenses.gpl3; - maintainers = with maintainers; [ mnacamura ]; + maintainers = with maintainers; [ mnacamura prikhi ]; platforms = platforms.linux; }; } diff --git a/pkgs/applications/editors/android-studio/default.nix b/pkgs/applications/editors/android-studio/default.nix index b6a6acf8ab7f..e97e22e4a9ef 100644 --- a/pkgs/applications/editors/android-studio/default.nix +++ b/pkgs/applications/editors/android-studio/default.nix @@ -13,14 +13,14 @@ let sha256Hash = "117skqjax1xz9plarhdnrw2rwprjpybdc7mx7wggxapyy920vv5r"; }; betaVersion = { - version = "3.3.0.13"; # "Android Studio 3.3 Beta 1" - build = "182.5073496"; - sha256Hash = "0bg1h0msd6mpkvirkg4pssa1ak32smv2rlxxsjdm3p29p8gg59px"; + version = "3.3.0.14"; # "Android Studio 3.3 Beta 2" + build = "182.5078385"; + sha256Hash = "10jw508fzxbknfl1l058ksnnli2nav91wmh2x2p0mz96lkf5bvhn"; }; latestVersion = { # canary & dev - version = "3.4.0.0"; # "Android Studio 3.4 Canary 1" - build = "182.5070326"; - sha256Hash = "03h2yns8s9dqbbc9agxhidpmziy9g3z89nm3byydw43hdz54hxab"; + version = "3.4.0.1"; # "Android Studio 3.4 Canary 2" + build = "183.5081642"; + sha256Hash = "0ck6habkgnwbr10pr3bfy8ywm3dsm21k9jdj7g685v22sw0zy3yk"; }; in rec { # Old alias diff --git a/pkgs/applications/editors/atom/default.nix b/pkgs/applications/editors/atom/default.nix index a6525804ee0b..834c6bedf3c0 100644 --- a/pkgs/applications/editors/atom/default.nix +++ b/pkgs/applications/editors/atom/default.nix @@ -3,14 +3,14 @@ let versions = { atom = { - version = "1.32.0"; - sha256 = "0dha8zi4gshxj993ns7ybi7q86pfqwzsasrk3a7b5xrdqbrcm5md"; + version = "1.32.1"; + sha256 = "1x22jbhvagqw9mvq0v7z4z09qp727vl0rkyvaxn98xnj9gvcfkq9"; }; atom-beta = { version = "1.33.0"; - beta = 0; - sha256 = "1x4s12zvfd2gjy7mimndbhs6x9k37jq4dyy6r1mzhwfysix74val"; + beta = 1; + sha256 = "0sf98apmb57msgr5p1xly0mffzn2s808nsfsmbisk4qqmm9fv2m3"; }; }; diff --git a/pkgs/applications/editors/emacs/default.nix b/pkgs/applications/editors/emacs/default.nix index c1bfdf8157da..e95d2b615359 100644 --- a/pkgs/applications/editors/emacs/default.nix +++ b/pkgs/applications/editors/emacs/default.nix @@ -1,7 +1,7 @@ { stdenv, lib, fetchurl, ncurses, xlibsWrapper, libXaw, libXpm, Xaw3d , pkgconfig, gettext, libXft, dbus, libpng, libjpeg, libungif , libtiff, librsvg, gconf, libxml2, imagemagick, gnutls, libselinux -, alsaLib, cairo, acl, gpm, AppKit, GSS, ImageIO, m17n_lib, libotf +, alsaLib, cairo, acl, gpm, cf-private, AppKit, GSS, ImageIO, m17n_lib, libotf , systemd ? null , withX ? !stdenv.isDarwin , withNS ? stdenv.isDarwin @@ -64,9 +64,12 @@ stdenv.mkDerivation rec { ++ lib.optional (withX && withGTK2) gtk2-x11 ++ lib.optionals (withX && withGTK3) [ gtk3-x11 gsettings-desktop-schemas ] ++ lib.optional (stdenv.isDarwin && withX) cairo - ++ lib.optionals (withX && withXwidgets) [ webkitgtk ]; - - propagatedBuildInputs = lib.optionals withNS [ AppKit GSS ImageIO ]; + ++ lib.optionals (withX && withXwidgets) [ webkitgtk ] + ++ lib.optionals withNS [ + AppKit GSS ImageIO + # Needed for CFNotificationCenterAddObserver symbols. + cf-private + ]; hardeningDisable = [ "format" ]; diff --git a/pkgs/applications/editors/jetbrains/default.nix b/pkgs/applications/editors/jetbrains/default.nix index 23ecfb0c19d3..f5fbf1b5f03d 100644 --- a/pkgs/applications/editors/jetbrains/default.nix +++ b/pkgs/applications/editors/jetbrains/default.nix @@ -289,12 +289,12 @@ in idea-community = buildIdea rec { name = "idea-community-${version}"; - version = "2018.2.4"; /* updated by script */ + version = "2018.2.5"; /* updated by script */ description = "Integrated Development Environment (IDE) by Jetbrains, community edition"; license = stdenv.lib.licenses.asl20; src = fetchurl { url = "https://download.jetbrains.com/idea/ideaIC-${version}.tar.gz"; - sha256 = "1syrxkp4pk95bvx02g2hg0mvn36w098h82k0qv0j6aqv0sidfzjy"; /* updated by script */ + sha256 = "0jnnmhn1gba670q2yprlh3ypa6k21pbg91pshz9aqkdhhmzk4759"; /* updated by script */ }; wmClass = "jetbrains-idea-ce"; update-channel = "IntelliJ IDEA Release"; @@ -302,12 +302,12 @@ in idea-ultimate = buildIdea rec { name = "idea-ultimate-${version}"; - version = "2018.2.4"; /* updated by script */ + version = "2018.2.5"; /* updated by script */ description = "Integrated Development Environment (IDE) by Jetbrains, requires paid license"; license = stdenv.lib.licenses.unfree; src = fetchurl { url = "https://download.jetbrains.com/idea/ideaIU-${version}-no-jdk.tar.gz"; - sha256 = "0z1ga6lzmkn7y7y24984vmp3ilrfc1ak1ddcgsdkwkiq5bx67ck8"; /* updated by script */ + sha256 = "105mzbqm3bx05bmkwyfykz76bzgzzgb9hb6wcagb9fv7dvqyggg6"; /* updated by script */ }; wmClass = "jetbrains-idea"; update-channel = "IntelliJ IDEA Release"; diff --git a/pkgs/applications/editors/quilter/default.nix b/pkgs/applications/editors/quilter/default.nix index 4d4cb0239bf3..87ffd3256a88 100644 --- a/pkgs/applications/editors/quilter/default.nix +++ b/pkgs/applications/editors/quilter/default.nix @@ -1,10 +1,10 @@ -{ stdenv, fetchFromGitHub, fetchpatch, vala, pkgconfig, meson, ninja, python3 +{ stdenv, fetchFromGitHub, fetchpatch, vala_0_40, pkgconfig, meson, ninja, python3 , granite, gtk3, desktop-file-utils, gnome3, gtksourceview, webkitgtk, gtkspell3 , discount, gobjectIntrospection, wrapGAppsHook }: stdenv.mkDerivation rec { pname = "quilter"; - version = "1.6.3"; + version = "1.6.8"; name = "${pname}-${version}"; @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { owner = "lainsce"; repo = pname; rev = version; - sha256 = "1wa0i6dgg6fgb7q9z33v9qmn1a1dn3ik58v1f3a49dvd5xyf8q6q"; + sha256 = "07i9pivpddgixn1wzbr15gvzf0n5pklx0gkjjaa35kvj2z8k31x5"; }; nativeBuildInputs = [ @@ -22,40 +22,19 @@ stdenv.mkDerivation rec { ninja pkgconfig python3 - vala + vala_0_40 # should be `elementary.vala` when elementary attribute set is merged wrapGAppsHook ]; buildInputs = [ discount + gnome3.defaultIconTheme # should be `elementary.defaultIconTheme`when elementary attribute set is merged + gnome3.libgee granite gtk3 gtksourceview gtkspell3 webkitgtk - gnome3.libgee - ]; - - patches = [ - # Fix build with vala 0.42 - Drop these in next release - (fetchpatch { - url = "https://github.com/lainsce/quilter/commit/a58838213cd7f2d33048c7b34b96dc8875612624.patch"; - sha256 = "1a4w1zql4zfk8scgrrssrm9n3sh5fsc1af5zvrqk8skbv7f2c80n"; - }) - (fetchpatch { - url = "https://github.com/lainsce/quilter/commit/d1800ce830343a1715bc83da3339816554896be5.patch"; - sha256 = "0xl5iz8bgx5661vbbq8qa1wkfvw9d3da67x564ckjfi05zq1vddz"; - }) - # Correct libMarkdown dependency discovery: See https://github.com/lainsce/quilter/pull/170 - (fetchpatch { - url = "https://github.com/lainsce/quilter/commit/8b1f3a60bd14cb86c1c62f9917c5f0c12bc4e459.patch"; - sha256 = "1kjc6ygf9yjvqfa4xhzxiava3338swp9wbjhpfaa3pyz3ayh188n"; - }) - # post_install script cleanups: See https://github.com/lainsce/quilter/pull/171 - (fetchpatch { - url = "https://github.com/lainsce/quilter/commit/55bf3b10cd94fcc40b0867bbdb1931a09f577922.patch"; - sha256 = "1330amichaif2qfrh4qkxwqbcpr87ipik7vzjbjdm2bv3jz9353r"; - }) ]; postPatch = '' @@ -65,9 +44,9 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "Focus on your writing - designed for elementary OS"; - homepage = https://github.com/lainsce/quilter; - license = licenses.gpl2Plus; + homepage = https://github.com/lainsce/quilter; + license = licenses.gpl2Plus; maintainers = with maintainers; [ worldofpeace ]; - platforms = platforms.linux; + platforms = platforms.linux; }; } diff --git a/pkgs/applications/editors/rstudio/clang-location.patch b/pkgs/applications/editors/rstudio/clang-location.patch new file mode 100644 index 000000000000..402abdd85636 --- /dev/null +++ b/pkgs/applications/editors/rstudio/clang-location.patch @@ -0,0 +1,25 @@ +diff --git i/src/cpp/core/libclang/LibClang.cpp w/src/cpp/core/libclang/LibClang.cpp +index ec12a3a1ff..8c81b633ae 100644 +--- i/src/cpp/core/libclang/LibClang.cpp ++++ w/src/cpp/core/libclang/LibClang.cpp +@@ -54,7 +54,7 @@ std::vector<std::string> defaultCompileArgs(LibraryVersion version) + + // we need to add in the associated libclang headers as + // they are not discovered / used by default during compilation +- FilePath llvmPath = s_libraryPath.parent().parent(); ++ FilePath llvmPath("@clang@"); + boost::format fmt("%1%/lib/clang/%2%/include"); + fmt % llvmPath.absolutePath() % version.asString(); + std::string includePath = fmt.str(); +@@ -77,10 +77,7 @@ std::vector<std::string> systemClangVersions() + #elif defined(__unix__) + // default set of versions + clangVersions = { +- "/usr/lib/libclang.so", +- "/usr/lib/llvm/libclang.so", +- "/usr/lib64/libclang.so", +- "/usr/lib64/llvm/libclang.so", ++ "@libclang.so@" + }; + + // iterate through the set of available 'llvm' directories diff --git a/pkgs/applications/editors/rstudio/default.nix b/pkgs/applications/editors/rstudio/default.nix index 1a5c9d65583f..9d8c430630e5 100644 --- a/pkgs/applications/editors/rstudio/default.nix +++ b/pkgs/applications/editors/rstudio/default.nix @@ -6,7 +6,7 @@ let verMajor = "1"; verMinor = "1"; - verPatch = "456"; + verPatch = "463"; version = "${verMajor}.${verMinor}.${verPatch}"; ginVer = "1.5"; gwtVer = "2.7.0"; @@ -22,7 +22,7 @@ stdenv.mkDerivation rec { owner = "rstudio"; repo = "rstudio"; rev = "v${version}"; - sha256 = "0hv07qrbjwapbjrkddasglsgk0x5j7qal468i5rv77krsp09s4fz"; + sha256 = "014g984znsczzy1fyn9y1ly3rbsngryfs674lfgciz60mqnl8im6"; }; # Hack RStudio to only use the input R. diff --git a/pkgs/applications/editors/rstudio/fix-cmake.patch b/pkgs/applications/editors/rstudio/fix-cmake.patch new file mode 100644 index 000000000000..3effc0eaa32b --- /dev/null +++ b/pkgs/applications/editors/rstudio/fix-cmake.patch @@ -0,0 +1,15 @@ +diff --git a/src/cpp/desktop/CMakeLists.txt b/src/cpp/desktop/CMakeLists.txt +index f5701bf735..27af4148ff 100644 +--- a/src/cpp/desktop/CMakeLists.txt ++++ b/src/cpp/desktop/CMakeLists.txt +@@ -112,6 +112,7 @@ find_package(Qt5WebEngine REQUIRED) + find_package(Qt5WebEngineWidgets REQUIRED) + find_package(Qt5PrintSupport REQUIRED) + find_package(Qt5Quick REQUIRED) ++find_package(Qt5QuickWidgets REQUIRED) + find_package(Qt5Positioning REQUIRED) + find_package(Qt5Sensors REQUIRED) + find_package(Qt5Svg REQUIRED) +-- +2.17.1 + diff --git a/pkgs/applications/editors/rstudio/preview.nix b/pkgs/applications/editors/rstudio/preview.nix new file mode 100644 index 000000000000..340aeec15e0f --- /dev/null +++ b/pkgs/applications/editors/rstudio/preview.nix @@ -0,0 +1,119 @@ +{ stdenv, fetchurl, fetchFromGitHub, makeDesktopItem, cmake, boost, zlib +, openssl, R, qtbase, qtdeclarative, qtsensors, qtwebengine, qtwebchannel +, libuuid, hunspellDicts, unzip, ant, jdk, gnumake, makeWrapper, pandoc +, llvmPackages +}: + +let + rev = "f33fb2b2f1"; + ginVer = "2.1.2"; + gwtVer = "2.8.1"; +in +stdenv.mkDerivation rec { + name = "RStudio-preview-${rev}"; + + nativeBuildInputs = [ cmake unzip ant jdk makeWrapper pandoc ]; + + buildInputs = [ boost zlib openssl R qtbase qtdeclarative qtsensors + qtwebengine qtwebchannel libuuid ]; + + src = fetchFromGitHub { + owner = "rstudio"; + repo = "rstudio"; + inherit rev; + sha256 = "0v3vzqjp74c3m4h9l6w2lrdnjqaimdjzbf7vhnlxj2qa0lwsnykb"; + }; + + # Hack RStudio to only use the input R and provided libclang. + patches = [ ./r-location.patch ./clang-location.patch ]; + postPatch = '' + substituteInPlace src/cpp/core/r_util/REnvironmentPosix.cpp --replace '@R@' ${R} + substituteInPlace src/cpp/core/libclang/LibClang.cpp \ + --replace '@clang@' ${llvmPackages.clang.cc} \ + --replace '@libclang.so@' ${llvmPackages.clang.cc.lib}/lib/libclang.so + ''; + + ginSrc = fetchurl { + url = "https://s3.amazonaws.com/rstudio-buildtools/gin-${ginVer}.zip"; + sha256 = "16jzmljravpz6p2rxa87k5f7ir8vs7ya75lnfybfajzmci0p13mr"; + }; + + gwtSrc = fetchurl { + url = "https://s3.amazonaws.com/rstudio-buildtools/gwt-${gwtVer}.zip"; + sha256 = "19x000m3jwnkqgi6ic81lkzyjvvxcfacw2j0vcfcaknvvagzhyhb"; + }; + + hunspellDictionaries = with stdenv.lib; filter isDerivation (attrValues hunspellDicts); + + mathJaxSrc = fetchurl { + url = https://s3.amazonaws.com/rstudio-buildtools/mathjax-26.zip; + sha256 = "0wbcqb9rbfqqvvhqr1pbqax75wp8ydqdyhp91fbqfqp26xzjv6lk"; + }; + + rsconnectSrc = fetchFromGitHub { + owner = "rstudio"; + repo = "rsconnect"; + rev = "984745d8"; + sha256 = "037z0y32k1gdda192y5qn5hi7wp8wyap44mkjlklrgcqkmlcylb9"; + }; + + preConfigure = + '' + GWT_LIB_DIR=src/gwt/lib + + mkdir -p $GWT_LIB_DIR/gin/${ginVer} + unzip ${ginSrc} -d $GWT_LIB_DIR/gin/${ginVer} + + unzip ${gwtSrc} + mkdir -p $GWT_LIB_DIR/gwt + mv gwt-${gwtVer} $GWT_LIB_DIR/gwt/${gwtVer} + + mkdir dependencies/common/dictionaries + for dict in ${builtins.concatStringsSep " " hunspellDictionaries}; do + for i in "$dict/share/hunspell/"*; do + ln -sv $i dependencies/common/dictionaries/ + done + done + + unzip ${mathJaxSrc} -d dependencies/common/mathjax-26 + + mkdir -p dependencies/common/pandoc + cp ${pandoc}/bin/pandoc dependencies/common/pandoc/ + + cp -r ${rsconnectSrc} dependencies/common/rsconnect + pushd dependencies/common + ${R}/bin/R CMD build -d --no-build-vignettes rsconnect + popd + ''; + + enableParallelBuilding = true; + + cmakeFlags = [ "-DRSTUDIO_TARGET=Desktop" "-DQT_QMAKE_EXECUTABLE=$NIX_QT5_TMP/bin/qmake" ]; + + desktopItem = makeDesktopItem { + name = name; + exec = "rstudio %F"; + icon = "rstudio"; + desktopName = "RStudio Preview"; + genericName = "IDE"; + comment = meta.description; + categories = "Development;"; + mimeType = "text/x-r-source;text/x-r;text/x-R;text/x-r-doc;text/x-r-sweave;text/x-r-markdown;text/x-r-html;text/x-r-presentation;application/x-r-data;application/x-r-project;text/x-r-history;text/x-r-profile;text/x-tex;text/x-markdown;text/html;text/css;text/javascript;text/x-chdr;text/x-csrc;text/x-c++hdr;text/x-c++src;"; + }; + + postInstall = '' + wrapProgram $out/bin/rstudio --suffix PATH : ${gnumake}/bin + mkdir $out/share + cp -r ${desktopItem}/share/applications $out/share + mkdir $out/share/icons + ln $out/rstudio.png $out/share/icons + ''; + + meta = with stdenv.lib; + { description = "Set of integrated tools for the R language"; + homepage = https://www.rstudio.com/; + license = licenses.agpl3; + maintainers = with maintainers; [ averelld ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/editors/thonny/default.nix b/pkgs/applications/editors/thonny/default.nix index cccf59f3e7bb..ba68a5420a88 100644 --- a/pkgs/applications/editors/thonny/default.nix +++ b/pkgs/applications/editors/thonny/default.nix @@ -4,13 +4,13 @@ with python3.pkgs; buildPythonApplication rec { pname = "thonny"; - version = "3.0.1"; + version = "3.0.5"; src = fetchFromBitbucket { owner = "plas"; repo = pname; - rev = "f66bd266deda11534561a01ede53cf1b71d2c3c0"; - sha256 = "0mjskb0gyddybvlbhm10ch1rwzvmci95b018x67bh67bybdl4hm7"; + rev = "e5a1ad4ae9d24066a769489b1e168b4bd6e00b03"; + sha256 = "1lrl5pj9dpw9i5ij863hd47gfd15nmvglqkl2ldwgfn7kgpsdkz5"; }; propagatedBuildInputs = with python3.pkgs; [ diff --git a/pkgs/applications/editors/vim/default.nix b/pkgs/applications/editors/vim/default.nix index 26cd61d182bd..2f34a6ddeb6b 100644 --- a/pkgs/applications/editors/vim/default.nix +++ b/pkgs/applications/editors/vim/default.nix @@ -6,7 +6,7 @@ sha256 = "18ifhv5q9prd175q3vxbqf6qyvkk6bc7d2lhqdk0q78i68kv9y0c"; } # apple frameworks -, Carbon, Cocoa +, cf-private, Carbon, Cocoa }: let @@ -19,7 +19,11 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ gettext pkgconfig ]; buildInputs = [ ncurses ] - ++ stdenv.lib.optionals stdenv.hostPlatform.isDarwin [ Carbon Cocoa ]; + ++ stdenv.lib.optionals stdenv.hostPlatform.isDarwin [ + Carbon Cocoa + # Needed for OBJC_CLASS_$_NSArray symbols. + cf-private + ]; configureFlags = [ "--enable-multibyte" diff --git a/pkgs/applications/graphics/ImageMagick/7.0.nix b/pkgs/applications/graphics/ImageMagick/7.0.nix index e164a789459b..8fb21e65c951 100644 --- a/pkgs/applications/graphics/ImageMagick/7.0.nix +++ b/pkgs/applications/graphics/ImageMagick/7.0.nix @@ -13,8 +13,8 @@ let else throw "ImageMagick is not supported on this platform."; cfg = { - version = "7.0.8-12"; - sha256 = "0rq7qhbfsxvclazi1l6kqi4wqsph7hmzcjbh2pmf0276mrkgm7cd"; + version = "7.0.8-14"; + sha256 = "0pbrmzsjc8l4klfsz739rnmw61m712r82ryjl8ycvbxdzxwnwm9v"; patches = []; }; in diff --git a/pkgs/applications/graphics/ahoviewer/default.nix b/pkgs/applications/graphics/ahoviewer/default.nix index 532645803808..52df41c683cd 100644 --- a/pkgs/applications/graphics/ahoviewer/default.nix +++ b/pkgs/applications/graphics/ahoviewer/default.nix @@ -8,13 +8,13 @@ assert useUnrar -> unrar != null; stdenv.mkDerivation rec { name = "ahoviewer-${version}"; - version = "1.5.0"; + version = "1.6.4"; src = fetchFromGitHub { owner = "ahodesuka"; repo = "ahoviewer"; rev = version; - sha256 = "1adzxp30fwh41y339ha8i5qp89zf21dw18vcicqqnzvyxbk5r3ig"; + sha256 = "144jmk8w7dnmqy4w81b3kzama7i97chx16pgax2facn72a92921q"; }; enableParallelBuilding = true; @@ -29,11 +29,6 @@ stdenv.mkDerivation rec { gst_all_1.gst-plugins-base ] ++ stdenv.lib.optional useUnrar unrar; - # https://github.com/ahodesuka/ahoviewer/issues/60 - # Already fixed in the master branch - # TODO: remove this next release - makeFlags = [ ''LIBS=-lssl -lcrypto'' ]; - postPatch = ''patchShebangs version.sh''; postInstall = '' diff --git a/pkgs/applications/graphics/avocode/default.nix b/pkgs/applications/graphics/avocode/default.nix index e0aea87c90c3..7777be918975 100644 --- a/pkgs/applications/graphics/avocode/default.nix +++ b/pkgs/applications/graphics/avocode/default.nix @@ -1,23 +1,24 @@ { stdenv, makeDesktopItem, fetchurl, unzip -, gdk_pixbuf, glib, gtk2, atk, pango, cairo, freetype, fontconfig, dbus, nss, nspr, alsaLib, cups, expat, udev, gnome2 -, xorg, mozjpeg +, gdk_pixbuf, glib, gtk3, atk, at-spi2-atk, pango, cairo, freetype, fontconfig, dbus, nss, nspr, alsaLib, cups, expat, udev, gnome3 +, xorg, mozjpeg, makeWrapper, gsettings-desktop-schemas }: stdenv.mkDerivation rec { name = "avocode-${version}"; - version = "3.4.0"; + version = "3.6.2"; src = fetchurl { url = "https://media.avocode.com/download/avocode-app/${version}/avocode-${version}-linux.zip"; - sha256 = "1dk4vgam9r5nl8dvpfwrn52gq6r4zxs4zz63p3c4gk73d8qnh4dl"; + sha256 = "1slxxr3j0djqdnbk645sriwl99jp9imndyxiwd8aqggmmlp145a2"; }; - libPath = stdenv.lib.makeLibraryPath (with xorg; with gnome2; [ + libPath = stdenv.lib.makeLibraryPath (with xorg; with gnome3; [ stdenv.cc.cc.lib gdk_pixbuf glib - gtk2 + gtk3 atk + at-spi2-atk pango cairo freetype @@ -29,7 +30,6 @@ stdenv.mkDerivation rec { cups expat udev - GConf libX11 libxcb libXi @@ -54,7 +54,8 @@ stdenv.mkDerivation rec { comment = "The bridge between designers and developers"; }; - buildInputs = [ unzip ]; + nativeBuildInputs = [makeWrapper]; + buildInputs = [ unzip gtk3 gsettings-desktop-schemas]; # src is producing multiple folder on unzip so we must # override unpackCmd to extract it into newly created folder @@ -85,6 +86,10 @@ stdenv.mkDerivation rec { for file in $(find $out -type f \( -perm /0111 -o -name \*.so\* \) ); do patchelf --set-rpath ${libPath}:$out/ $file done + for file in $out/bin/*; do + wrapProgram $file \ + --prefix XDG_DATA_DIRS : "$XDG_ICON_DIRS:${gtk3.out}/share:${gsettings-desktop-schemas}/share:$out/share:$GSETTINGS_SCHEMAS_PATH" + done ''; enableParallelBuilding = true; diff --git a/pkgs/applications/graphics/phototonic/default.nix b/pkgs/applications/graphics/phototonic/default.nix index ce300eaf9f6d..7da1d4b612f9 100644 --- a/pkgs/applications/graphics/phototonic/default.nix +++ b/pkgs/applications/graphics/phototonic/default.nix @@ -2,15 +2,13 @@ stdenv.mkDerivation rec { name = "phototonic-${version}"; - version = "1.7.1"; + version = "2.1"; src = fetchFromGitHub { repo = "phototonic"; owner = "oferkv"; - # There is currently no tag for 1.7.1 see - # https://github.com/oferkv/phototonic/issues/214 - rev = "c37070e4a068570d34ece8de1e48aa0882c80c5b"; - sha256 = "1agd3bsrpljd019qrjvlbim5l0bhpx53dhpc0gvyn0wmcdzn92gj"; + rev = "v${version}"; + sha256 = "0csidmxl1sfmn6gq81vn9f9jckb4swz3sgngnwqa4f75lr6604h7"; }; buildInputs = [ qtbase exiv2 ]; diff --git a/pkgs/applications/graphics/shutter/default.nix b/pkgs/applications/graphics/shutter/default.nix index a409060afdc6..7e7bf644ce79 100644 --- a/pkgs/applications/graphics/shutter/default.nix +++ b/pkgs/applications/graphics/shutter/default.nix @@ -1,27 +1,28 @@ { stdenv, fetchurl, perl, perlPackages, makeWrapper, imagemagick, gdk_pixbuf, librsvg -, hicolor-icon-theme +, hicolor-icon-theme, procps }: let perlModules = with perlPackages; [ Gnome2 Gnome2Canvas Gtk2 Glib Pango Gnome2VFS Gnome2Wnck Gtk2ImageView - Gtk2Unique FileWhich FileCopyRecursive XMLSimple NetDBus XMLTwig + Gtk2Unique FileBaseDir FileWhich FileCopyRecursive XMLSimple NetDBus XMLTwig XMLParser HTTPMessage ProcSimple SortNaturally LocaleGettext ProcProcessTable URI ImageExifTool Gtk2AppIndicator LWP JSON - PerlMagick WWWMechanize HTTPDate HTMLForm HTMLParser HTMLTagset JSONXS + PerlMagick WWWMechanize HTTPDate HTMLForm HTMLParser HTMLTagset JSONMaybeXS commonsense HTTPCookies NetOAuth PathClass GooCanvas X11Protocol Cairo EncodeLocale TryTiny TypesSerialiser LWPMediaTypes ]; in stdenv.mkDerivation rec { - name = "shutter-0.94"; + name = "shutter-0.94.2"; src = fetchurl { - url = "https://launchpad.net/shutter/0.9x/0.94/+download/shutter-0.94.tar.gz"; - sha256 = "943152cdf9e1b2096d38e3da9622d8bf97956a08eda747c3e7fcc564a3f0f40d"; + url = "https://launchpad.net/shutter/0.9x/0.94.2/+download/shutter-0.94.2.tar.gz"; + sha256 = "0mas7npm935j4rhqqjn226822s9sa4bsxrkp0b5fjj3z096k6vw0"; }; - buildInputs = [ perl makeWrapper gdk_pixbuf librsvg ] ++ perlModules; + nativeBuildInputs = [ makeWrapper ]; + buildInputs = [ perl procps gdk_pixbuf librsvg ] ++ perlModules; installPhase = '' mkdir -p "$out" diff --git a/pkgs/applications/kde/default.nix b/pkgs/applications/kde/default.nix index 072b66e55638..16c3a47431c9 100644 --- a/pkgs/applications/kde/default.nix +++ b/pkgs/applications/kde/default.nix @@ -129,6 +129,7 @@ let kontact = callPackage ./kontact.nix {}; kontactinterface = callPackage ./kontactinterface.nix {}; konquest = callPackage ./konquest.nix {}; + konqueror = callPackage ./konqueror.nix {}; korganizer = callPackage ./korganizer.nix {}; kpimtextedit = callPackage ./kpimtextedit.nix {}; ksmtp = callPackage ./ksmtp {}; diff --git a/pkgs/applications/kde/konqueror.nix b/pkgs/applications/kde/konqueror.nix new file mode 100644 index 000000000000..e6442fea2f9d --- /dev/null +++ b/pkgs/applications/kde/konqueror.nix @@ -0,0 +1,20 @@ +{ lib +, mkDerivation +, extra-cmake-modules, kdoctools +, kdelibs4support, kcmutils, khtml, kdesu +, qtwebkit, qtwebengine, qtx11extras, qtscript, qtwayland +}: + +mkDerivation { + name = "konqueror"; + nativeBuildInputs = [ extra-cmake-modules kdoctools ]; + buildInputs = [ + kdelibs4support kcmutils khtml kdesu + qtwebkit qtwebengine qtx11extras qtscript qtwayland + ]; + meta = { + license = with lib.licenses; [ gpl2 ]; + maintainers = with lib.maintainers; [ ]; + }; +} + diff --git a/pkgs/applications/misc/1password/default.nix b/pkgs/applications/misc/1password/default.nix index 331f516c88ce..a25d40e29bd0 100644 --- a/pkgs/applications/misc/1password/default.nix +++ b/pkgs/applications/misc/1password/default.nix @@ -2,24 +2,24 @@ stdenv.mkDerivation rec { name = "1password-${version}"; - version = "0.5.3"; + version = "0.5.4"; src = if stdenv.hostPlatform.system == "i686-linux" then fetchzip { url = "https://cache.agilebits.com/dist/1P/op/pkg/v${version}/op_linux_386_v${version}.zip"; - sha256 = "05s223h1yps4k9kmignl0r5sbh6w7m1hnlmafnf1kiwv7gacvxjc"; + sha256 = "0wni2hk5b1qfr24vi24jiprpi08k3qgaw9lqp61k41a1sjp3izv0"; stripRoot = false; } else if stdenv.hostPlatform.system == "x86_64-linux" then fetchzip { url = "https://cache.agilebits.com/dist/1P/op/pkg/v${version}/op_linux_amd64_v${version}.zip"; - sha256 = "0p9x1fx0309v8dxxaf88m8x8q15zzqywfmjn6v5wb9v3scp9396v"; + sha256 = "169d5fl3cfw3xrlpm9nlmwbnp0xgh0la9qybzf8ragp0020nlyih"; stripRoot = false; } else if stdenv.hostPlatform.system == "x86_64-darwin" then fetchzip { url = "https://cache.agilebits.com/dist/1P/op/pkg/v${version}/op_darwin_amd64_v${version}.zip"; - sha256 = "1z2xp9bn93gr4ha6zx65va1fb58a2xlnnmpv583y96gq3vbnqdcj"; + sha256 = "1scikv7v33kzg9rqsrz97yklxaskvif84br13zg8annm43k5vlma"; stripRoot = false; } else throw "Architecture not supported"; diff --git a/pkgs/applications/misc/alacritty/default.nix b/pkgs/applications/misc/alacritty/default.nix index e4dffa98f39a..594173f11c62 100644 --- a/pkgs/applications/misc/alacritty/default.nix +++ b/pkgs/applications/misc/alacritty/default.nix @@ -73,7 +73,10 @@ in buildRustPackage rec { buildInputs = rpathLibs ++ lib.optionals stdenv.isDarwin darwinFrameworks; - outputs = [ "out" "terminfo" ]; + outputs = [ "out" "terminfo" ]; + + # https://github.com/NixOS/nixpkgs/issues/49693 + doCheck = !stdenv.isDarwin; postPatch = '' substituteInPlace copypasta/src/x11.rs \ diff --git a/pkgs/applications/misc/albert/default.nix b/pkgs/applications/misc/albert/default.nix index f16144f3befa..d1a62dad6c9f 100644 --- a/pkgs/applications/misc/albert/default.nix +++ b/pkgs/applications/misc/albert/default.nix @@ -3,7 +3,7 @@ let pname = "albert"; - version = "0.14.21"; + version = "0.14.22"; in mkDerivation rec { name = "${pname}-${version}"; @@ -12,7 +12,7 @@ mkDerivation rec { owner = "albertlauncher"; repo = "albert"; rev = "v${version}"; - sha256 = "16nk9krn1mwr0bh57viig9hizqyp3slna0qg7s5a736nsfxy226w"; + sha256 = "0i9kss5szirmd0pzw3cm692kl9rhkan1zfywfqrjdf3i3b6914sg"; fetchSubmodules = true; }; @@ -48,7 +48,7 @@ mkDerivation rec { homepage = https://albertlauncher.github.io/; description = "Desktop agnostic launcher"; license = licenses.gpl3Plus; - maintainers = with maintainers; [ ericsagnes ]; + maintainers = with maintainers; [ ericsagnes synthetica ]; platforms = platforms.linux; }; } diff --git a/pkgs/applications/misc/avrdudess/default.nix b/pkgs/applications/misc/avrdudess/default.nix index c803eb37ad6f..1144d5152847 100644 --- a/pkgs/applications/misc/avrdudess/default.nix +++ b/pkgs/applications/misc/avrdudess/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, unzip, mono, avrbinutils, avrgcc, avrdude, gtk2, xdg_utils }: +{ stdenv, fetchurl, unzip, mono, avrdude, gtk2, xdg_utils }: stdenv.mkDerivation rec { name = "avrdudess-2.2.20140102"; @@ -23,7 +23,7 @@ stdenv.mkDerivation rec { export LD_LIBRARY_PATH="${stdenv.lib.makeLibraryPath [gtk2 mono]}" # We need PATH from user env for xdg-open to find its tools, which # typically depend on the currently running desktop environment. - export PATH="${stdenv.lib.makeBinPath [ avrgcc avrbinutils avrdude xdg_utils ]}:\$PATH" + export PATH="${stdenv.lib.makeBinPath [ avrdude xdg_utils ]}:\$PATH" # avrdudess must have its resource files in its current working directory cd $out/avrdudess && exec ${mono}/bin/mono "$out/avrdudess/avrdudess.exe" "\$@" diff --git a/pkgs/applications/misc/bb/default.nix b/pkgs/applications/misc/bb/default.nix index 0689843af612..f085e4bd7dd5 100644 --- a/pkgs/applications/misc/bb/default.nix +++ b/pkgs/applications/misc/bb/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, aalib, ncurses, xorg, libmikmod }: +{ stdenv, lib, fetchurl, darwin, aalib, ncurses, xorg, libmikmod }: stdenv.mkDerivation rec { name = "bb-${version}"; @@ -12,13 +12,17 @@ stdenv.mkDerivation rec { buildInputs = [ aalib ncurses libmikmod xorg.libXau xorg.libXdmcp xorg.libX11 - ]; + ] ++ lib.optional stdenv.isDarwin darwin.apple_sdk.frameworks.CoreAudio; - meta = with stdenv.lib; { + postPatch = lib.optionalString stdenv.isDarwin '' + sed -i -e '/^#include <malloc.h>$/d' *.c + ''; + + meta = with lib; { homepage = http://aa-project.sourceforge.net/bb; description = "AA-lib demo"; license = licenses.gpl2; maintainers = [ maintainers.rnhmjoj ]; - platforms = platforms.linux; + platforms = platforms.unix; }; } diff --git a/pkgs/applications/misc/dmrconfig/default.nix b/pkgs/applications/misc/dmrconfig/default.nix index 20c6ff57b241..9edf5e4f88c2 100644 --- a/pkgs/applications/misc/dmrconfig/default.nix +++ b/pkgs/applications/misc/dmrconfig/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "dmrconfig-${version}"; - version = "2018-10-20"; + version = "2018-10-29"; src = fetchFromGitHub { owner = "sergev"; repo = "dmrconfig"; - rev = "a4c5f893d2749727493427320c7f01768966ba51"; - sha256 = "0h7hv6fv6v5g922nvgrb0w7hsqbhaw7xmdc6vydh2p3l7sp31vg2"; + rev = "4924d00283c3c81a4b8251669e42aecd96b6145a"; + sha256 = "00a4hmbr71g0d4faskb8q96y6z212g2r4n533yvp88z8rq8vbxxn"; }; buildInputs = [ diff --git a/pkgs/applications/misc/gImageReader/default.nix b/pkgs/applications/misc/gImageReader/default.nix new file mode 100644 index 000000000000..16693cfbf09c --- /dev/null +++ b/pkgs/applications/misc/gImageReader/default.nix @@ -0,0 +1,71 @@ +{ stdenv, fetchFromGitHub, cmake, pkgconfig, libuuid +, sane-backends, podofo, libjpeg, djvulibre, libxmlxx3, libzip, tesseract +, enchant, intltool, poppler, json-glib +, ninja +, python3 + +# Gtk deps +# upstream gImagereader supports Qt too +, gtk3, gobjectIntrospection, wrapGAppsHook +, gnome3, gtkspell3, gtkspellmm, cairomm +}: + +let + variant = "gtk"; + pythonEnv = python3.withPackages( ps: with ps;[ pygobject3 ] ); +in +stdenv.mkDerivation rec { + name = "gImageReader-${version}"; + version = "3.2.99"; + + src = fetchFromGitHub { + owner= "manisandro"; + repo = "gImageReader"; + rev = "v${version}"; + sha256 = "19dbxq83j77lbvi10a8x0xxgw5hbsqyc852c196zzvmwk3km6pnc"; + }; + + nativeBuildInputs = [ + cmake ninja + intltool + pkgconfig + pythonEnv + + # Gtk specific + wrapGAppsHook + gobjectIntrospection + ]; + + buildInputs = [ + enchant + libxmlxx3 + libzip + libuuid + sane-backends + podofo + libjpeg + djvulibre + tesseract + poppler + + # Gtk specific + gnome3.gtkmm + gtkspell3 + gtkspellmm + gnome3.gtksourceview + gnome3.gtksourceviewmm + cairomm + json-glib + ]; + + # interface type can be where <type> is either gtk, qt5, qt4 + cmakeFlags = [ "-DINTERFACE_TYPE=${variant}" ]; + + meta = with stdenv.lib; { + description = "A simple Gtk/Qt front-end to tesseract-ocr"; + homepage = https://github.com/manisandro/gImageReader; + license = licenses.gpl3Plus; + maintainers = with maintainers; [teto]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/misc/hugo/default.nix b/pkgs/applications/misc/hugo/default.nix index c353a779b646..22badfc8cdd1 100644 --- a/pkgs/applications/misc/hugo/default.nix +++ b/pkgs/applications/misc/hugo/default.nix @@ -1,8 +1,8 @@ -{ stdenv, buildGoPackage, fetchFromGitHub, fetchpatch }: +{ stdenv, buildGoPackage, fetchFromGitHub }: buildGoPackage rec { name = "hugo-${version}"; - version = "0.47.1"; + version = "0.50"; goPackagePath = "github.com/gohugoio/hugo"; @@ -10,16 +10,9 @@ buildGoPackage rec { owner = "gohugoio"; repo = "hugo"; rev = "v${version}"; - sha256 = "0n27vyg66jfx4lwswsmdlybly8c9gy5rk7yhy7wzs3rwzlqv1jzj"; + sha256 = "1shrw7pxwrz9g5x9bq6k5qvhn3fqmwznadpw7i07msh97p8b3dyn"; }; - patches = [ - (fetchpatch { - url = "https://github.com/gohugoio/hugo/commit/b137ad4dbd6d14d0a9af68c044aaee61f2c87fe5.diff"; - sha256 = "0w1gpg11idqywqcpwzvx4xabn02kk8y4jmyz4h67mc3yh2dhq3ll"; - }) - ]; - goDeps = ./deps.nix; buildFlags = "-tags extended"; diff --git a/pkgs/applications/misc/hugo/deps.nix b/pkgs/applications/misc/hugo/deps.nix index 47487029ea01..d5c24d69048a 100644 --- a/pkgs/applications/misc/hugo/deps.nix +++ b/pkgs/applications/misc/hugo/deps.nix @@ -1,488 +1,721 @@ -# This file was generated by https://github.com/kamilchm/go2nix v1.2.1 [ + { goPackagePath = "github.com/BurntSushi/locker"; fetch = { type = "git"; url = "https://github.com/BurntSushi/locker"; - rev = "a6e239ea1c69bff1cfdb20c4b73dadf52f784b6a"; + rev = "a6e239ea1c69"; sha256 = "1xak4aync4klswq5217qvw191asgla51jr42y94vp109lirm5dzg"; }; } + { goPackagePath = "github.com/BurntSushi/toml"; fetch = { type = "git"; url = "https://github.com/BurntSushi/toml"; - rev = "3012a1dbe2e4bd1391d42b32f0577cb7bbc7f005"; - sha256 = "1fjdwwfzyzllgiwydknf1pwjvy49qxfsczqx5gz3y0izs7as99j6"; + rev = "a368813c5e64"; + sha256 = "1sjxs2lwc8jpln80s4rlzp7nprbcljhy5mz4rf9995gq93wqnym5"; }; } + { goPackagePath = "github.com/PuerkitoBio/purell"; fetch = { type = "git"; url = "https://github.com/PuerkitoBio/purell"; - rev = "975f53781597ed779763b7b65566e74c4004d8de"; - sha256 = "1j5l793zxrjv09z3cdgs05qn45sbhbm9njsw5cfv168x8z88pd3l"; + rev = "v1.1.0"; + sha256 = "0vsxyn1fbm7g873b8kf3hcsgqgncb5nmfq3zfsc35a9yhzarka91"; }; } + { goPackagePath = "github.com/PuerkitoBio/urlesc"; fetch = { type = "git"; url = "https://github.com/PuerkitoBio/urlesc"; - rev = "de5bf2ad457846296e2031421a34e2568e304e35"; + rev = "de5bf2ad4578"; sha256 = "0n0srpqwbaan1wrhh2b7ysz543pjs1xw2rghvqyffg9l0g8kzgcw"; }; } + + { + goPackagePath = "github.com/alecthomas/assert"; + fetch = { + type = "git"; + url = "https://github.com/alecthomas/assert"; + rev = "405dbfeb8e38"; + sha256 = "1l567pi17k593nrd1qlbmiq8z9jy3qs60px2a16fdpzjsizwqx8l"; + }; + } + { goPackagePath = "github.com/alecthomas/chroma"; fetch = { type = "git"; url = "https://github.com/alecthomas/chroma"; - rev = "5d7fef2ae60b501bbf28d476c3f273b8017d8261"; + rev = "v0.5.0"; sha256 = "150jv4vhsdi1gj3liwkgicdrwnzgv5qkq2fwznlnzf64vmfb0b9f"; }; } + + { + goPackagePath = "github.com/alecthomas/colour"; + fetch = { + type = "git"; + url = "https://github.com/alecthomas/colour"; + rev = "60882d9e2721"; + sha256 = "0iq566534gbzkd16ixg7fk298wd766821vvs80838yifx9yml5vs"; + }; + } + + { + goPackagePath = "github.com/alecthomas/repr"; + fetch = { + type = "git"; + url = "https://github.com/alecthomas/repr"; + rev = "117648cd9897"; + sha256 = "05v1rgzdqc8razf702laagrvhvx68xd9yxxmzd3dyz0d6425pdrp"; + }; + } + { goPackagePath = "github.com/bep/debounce"; fetch = { type = "git"; url = "https://github.com/bep/debounce"; - rev = "844797fa1dd9ba969d71b62797ff19d1e49d4eac"; + rev = "v1.1.0"; sha256 = "1sh4zv0hv7f454mhzpl2mbv7ar5rm00wyy5qr78x1h84bgph87wy"; }; } + { goPackagePath = "github.com/bep/gitmap"; fetch = { type = "git"; url = "https://github.com/bep/gitmap"; - rev = "ecb6fe06dbfd6bb4225e7fda7dc15612ecc8d960"; + rev = "v1.0.0"; sha256 = "0zqdl5h4ayi2gi5aqf35f1sjszhbcriksm2bf84fkrg7ngr48jn6"; }; } + { goPackagePath = "github.com/bep/go-tocss"; fetch = { type = "git"; url = "https://github.com/bep/go-tocss"; - rev = "2abb118dc8688b6c7df44e12f4152c2bded9b19c"; + rev = "v0.5.0"; sha256 = "12q7h6nydklq4kg65kcgd85209rx7zf64ba6nf3k7y16knj4233q"; }; } + { goPackagePath = "github.com/chaseadamsio/goorgeous"; fetch = { type = "git"; url = "https://github.com/chaseadamsio/goorgeous"; - rev = "dcf1ef873b8987bf12596fe6951c48347986eb2f"; + rev = "v1.1.0"; sha256 = "07qdqi46klizq3wigxqbiksnlgbrdc8hvmizgzg0aas5iqy88dcb"; }; } + { goPackagePath = "github.com/cpuguy83/go-md2man"; fetch = { type = "git"; url = "https://github.com/cpuguy83/go-md2man"; - rev = "691ee98543af2f262f35fbb54bdd42f00b9b9cc5"; - sha256 = "1864g10y9n6ni0p1yqjhvwyjdh0lgxnf7dlb0c4njazdg5rppww9"; + rev = "v1.0.8"; + sha256 = "1w22dfdamsq63b5rvalh9k2y7rbwfkkjs7vm9vd4a13h2ql70lg2"; }; } + { goPackagePath = "github.com/danwakefield/fnmatch"; fetch = { type = "git"; url = "https://github.com/danwakefield/fnmatch"; - rev = "cbb64ac3d964b81592e64f957ad53df015803288"; + rev = "cbb64ac3d964"; sha256 = "0cbf511ppsa6hf59mdl7nbyn2b2n71y0bpkzbmfkdqjhanqh1lqz"; }; } + + { + goPackagePath = "github.com/davecgh/go-spew"; + fetch = { + type = "git"; + url = "https://github.com/davecgh/go-spew"; + rev = "v1.1.1"; + sha256 = "0hka6hmyvp701adzag2g26cxdj47g21x6jz4sc6jjz1mn59d474y"; + }; + } + { goPackagePath = "github.com/disintegration/imaging"; fetch = { type = "git"; url = "https://github.com/disintegration/imaging"; - rev = "0bd5694c78c9c3d9a3cd06a706a8f3c59296a9ac"; + rev = "v1.5.0"; sha256 = "1laxccmzi7q51zxn81ringmdwp8iaipivrl375yc3gq56d70sp0r"; }; } + { goPackagePath = "github.com/dlclark/regexp2"; fetch = { type = "git"; url = "https://github.com/dlclark/regexp2"; - rev = "7632a260cbaf5e7594fc1544a503456ecd0827f1"; - sha256 = "0vhp5r0ywv9p1c74fm8xzclnwx2mg9f0764b3id7a9nwh0plisx2"; + rev = "v1.1.6"; + sha256 = "144s81ndviwhyy20ipxvvfvap8phv5p762glxrz6aqxprkxfarj5"; }; } + { goPackagePath = "github.com/eknkc/amber"; fetch = { type = "git"; url = "https://github.com/eknkc/amber"; - rev = "cdade1c073850f4ffc70a829e31235ea6892853b"; + rev = "cdade1c07385"; sha256 = "152w97yckwncgw7lwjvgd8d00wy6y0nxzlvx72kl7nqqxs9vhxd9"; }; } + { - goPackagePath = "github.com/fsnotify/fsnotify"; + goPackagePath = "github.com/fortytw2/leaktest"; fetch = { type = "git"; - url = "https://github.com/fsnotify/fsnotify"; - rev = "c2828203cd70a50dcccfb2761f8b1f8ceef9a8e9"; - sha256 = "07va9crci0ijlivbb7q57d2rz9h27zgn2fsm60spjsqpdbvyrx4g"; + url = "https://github.com/fortytw2/leaktest"; + rev = "v1.2.0"; + sha256 = "1lf9l6zgzjbcc7hmcjhhg3blx0y8icyxvjmjqqwfbwdk502803ra"; }; } + { - goPackagePath = "github.com/gobuffalo/envy"; + goPackagePath = "github.com/fsnotify/fsnotify"; fetch = { type = "git"; - url = "https://github.com/gobuffalo/envy"; - rev = "3c96536452167a705ca5a70b831d3810e1e10452"; - sha256 = "0ixqpdmb7kjlarkv0qlbwnbr194sajx9flysnhcldzmciqgk5bqs"; + url = "https://github.com/fsnotify/fsnotify"; + rev = "v1.4.7"; + sha256 = "07va9crci0ijlivbb7q57d2rz9h27zgn2fsm60spjsqpdbvyrx4g"; }; } + { goPackagePath = "github.com/gobwas/glob"; fetch = { type = "git"; url = "https://github.com/gobwas/glob"; - rev = "f756513aec94125582ee6c0dc94179251ef87370"; - sha256 = "1pyzlvb950864syf2safazv39s7rpi08r7x2vby82kj9ykqgvhc4"; + rev = "v0.2.3"; + sha256 = "0jxk1x806zn5x86342s72dq2qy64ksb3zrvrlgir2avjhwb18n6z"; }; } + { goPackagePath = "github.com/gorilla/websocket"; fetch = { type = "git"; url = "https://github.com/gorilla/websocket"; - rev = "3ff3320c2a1756a3691521efc290b4701575147c"; - sha256 = "1b0kpix2qxv3qiiq739nk9fjh453if0mcpr9gmlizicdpjp5alw2"; + rev = "v1.4.0"; + sha256 = "00i4vb31nsfkzzk7swvx3i75r2d960js3dri1875vypk3v2s0pzk"; }; } + { goPackagePath = "github.com/hashicorp/go-immutable-radix"; fetch = { type = "git"; url = "https://github.com/hashicorp/go-immutable-radix"; - rev = "7f3cd4390caab3250a57f30efdb2a65dd7649ecf"; - sha256 = "13nv1dac6i2mjdy8vsd4vwawwja78vggdjcnj1xfykg2k8jbkphv"; + rev = "v1.0.0"; + sha256 = "1v3nmsnk1s8bzpclrhirz7iq0g5xxbw9q5gvrg9ss6w9crs72qr6"; + }; + } + + { + goPackagePath = "github.com/hashicorp/go-uuid"; + fetch = { + type = "git"; + url = "https://github.com/hashicorp/go-uuid"; + rev = "v1.0.0"; + sha256 = "1jflywlani7583qm4ysph40hsgx3n66n5zr2k84i057fmwa1ypfy"; }; } + { goPackagePath = "github.com/hashicorp/golang-lru"; fetch = { type = "git"; url = "https://github.com/hashicorp/golang-lru"; - rev = "0fb14efe8c47ae851c0034ed7a448854d3d34cf3"; - sha256 = "0vg4yn3088ym4sj1d34kr13lp4v5gya7r2nxshp2bz70n46fsqn2"; + rev = "v0.5.0"; + sha256 = "12k2cp2k615fjvfa5hyb9k2alian77wivds8s65diwshwv41939f"; }; } + { goPackagePath = "github.com/hashicorp/hcl"; fetch = { type = "git"; url = "https://github.com/hashicorp/hcl"; - rev = "ef8a98b0bbce4a65b5aa4c368430a80ddc533168"; - sha256 = "1qalfsc31fra7hcw2lc3s20aj7al62fq3j5fn5kga3mg99b82nyr"; + rev = "v1.0.0"; + sha256 = "0q6ml0qqs0yil76mpn4mdx4lp94id8vbv575qm60jzl1ijcl5i66"; + }; + } + + { + goPackagePath = "github.com/inconshreveable/mousetrap"; + fetch = { + type = "git"; + url = "https://github.com/inconshreveable/mousetrap"; + rev = "v1.0.0"; + sha256 = "1mn0kg48xkd74brf48qf5hzp0bc6g8cf5a77w895rl3qnlpfw152"; }; } + { goPackagePath = "github.com/jdkato/prose"; fetch = { type = "git"; url = "https://github.com/jdkato/prose"; - rev = "99216ea17cba4e2f2a4e8bca778643e5a529b7aa"; - sha256 = "1mdh276lmj21jbi22ky8ngdsl9hfcdv6czshycbaiwjr5y9cv7bn"; + rev = "v1.1.0"; + sha256 = "1gjqgrpc7wbqvnhgwyfhxng24qvx37qjy0x2mbikiw1vaygxqsmy"; }; } + { - goPackagePath = "github.com/joho/godotenv"; 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- sha256 = "183lszf5gx84kcpb779v6a2y0mx9sssy8dgppng1z9a505nj1qcf"; + sha256 = "1bnr2dlj2a11qy3rwh6m1mv5419vy32j2axk3ln7bphyvwn7pli0"; type = "gem"; }; - version = "1.0.5"; + version = "1.1.1"; }; em-websocket = { dependencies = ["eventmachine" "http_parser.rb"]; @@ -104,10 +104,10 @@ dependencies = ["addressable" "colorator" "em-websocket" "i18n" "jekyll-sass-converter" "jekyll-watch" "kramdown" "liquid" "mercenary" "pathutil" "rouge" "safe_yaml"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "01rnf0y7wx4rzh2ag74bg37vkxbg8m4nf450lypgh4khrarr3bhw"; + sha256 = "1nn2sc308l2mz0yiall4r90l6vy67qp4sy9zapi73a948nd4a5k3"; type = "gem"; }; - version = "3.8.4"; + version = "3.8.5"; }; jekyll-avatar = { dependencies = ["jekyll"]; @@ -158,10 +158,10 @@ dependencies = ["listen"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "0m7scvj3ki8bmyx5v8pzibpg6my10nycnc28lip98dskf8iakprp"; + sha256 = "1s9ly83sp8albvgdff12xy2h4xd8lm6z2fah4lzmk2yvp85jzdzv"; type = "gem"; }; - version = "2.0.0"; + version = "2.1.2"; }; jemoji = { dependencies = ["gemoji" "html-pipeline" "jekyll"]; @@ -183,10 +183,10 @@ liquid = { source = { remotes = ["https://rubygems.org"]; - sha256 = "17fa0jgwm9a935fyvzy8bysz7j5n1vf1x2wzqkdfd5k08dbw3x2y"; + sha256 = "0bs9smxgj29s4k76zfj09f7mhd35qwm9zki1yqa4jfwiki8v97nw"; type = "gem"; }; - version = "4.0.0"; + version = "4.0.1"; }; listen = { dependencies = ["rb-fsevent" "rb-inotify" "ruby_dep"]; @@ -225,19 +225,19 @@ dependencies = ["mini_portile2"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "1h9nml9h3m0mpvmh8jfnqvblnz5n5y3mmhgfc38avfmfzdrq9bgc"; + sha256 = "0byyxrazkfm29ypcx5q4syrv126nvjnf7z6bqi01sqkv4llsi4qz"; type = "gem"; }; - version = "1.8.4"; + version = "1.8.5"; }; pathutil = { dependencies = ["forwardable-extended"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "0wc18ms1rzi44lpjychyw2a96jcmgxqdvy2949r4vvb5f4p0lgvz"; + sha256 = "12fm93ljw9fbxmv2krki5k5wkvr7560qy8p4spvb9jiiaqv78fz4"; type = "gem"; }; - version = "0.16.1"; + version = "0.16.2"; }; public_suffix = { source = { @@ -267,10 +267,10 @@ rouge = { source = { remotes = ["https://rubygems.org"]; - sha256 = "0h79gn2wmn1wix2d27lgiaimccyj8gvizrllyym500pir408x62f"; + sha256 = "1digsi2s8wyzx8vsqcxasw205lg6s7izx8jypl8rrpjwshmv83ql"; type = "gem"; }; - version = "3.2.1"; + version = "3.3.0"; }; ruby_dep = { source = { @@ -292,10 +292,10 @@ dependencies = ["sass-listen"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "1sy7xsbgpcy90j5ynbq967yplffp74pvph3r8ivn2sv2b44q6i61"; + sha256 = "18c6prbw9wl8bqhb2435pd9s0lzarl3g7xf8pmyla28zblvwxmyh"; type = "gem"; }; - version = "3.5.7"; + version = "3.6.0"; }; sass-listen = { dependencies = ["rb-fsevent" "rb-inotify"]; diff --git a/pkgs/applications/misc/jekyll/full/Gemfile.lock b/pkgs/applications/misc/jekyll/full/Gemfile.lock index 01e4f368223c..5fe2d1085001 100644 --- a/pkgs/applications/misc/jekyll/full/Gemfile.lock +++ b/pkgs/applications/misc/jekyll/full/Gemfile.lock @@ -16,7 +16,7 @@ GEM execjs coffee-script-source (1.11.1) colorator (1.1.0) - concurrent-ruby (1.0.5) + concurrent-ruby (1.1.1) em-websocket (0.5.1) eventmachine (>= 0.12.9) http_parser.rb (~> 0.6.0) @@ -34,7 +34,7 @@ GEM http_parser.rb (0.6.0) i18n (0.9.5) concurrent-ruby (~> 1.0) - jekyll (3.8.4) + jekyll (3.8.5) addressable (~> 2.4) colorator (~> 1.0) em-websocket (~> 0.5) @@ -68,14 +68,14 @@ GEM jekyll (~> 3.3) jekyll-sitemap (1.2.0) jekyll (~> 3.3) - jekyll-watch (2.0.0) + jekyll-watch (2.1.2) listen (~> 3.0) jemoji (0.10.1) gemoji (~> 3.0) html-pipeline (~> 2.2) jekyll (~> 3.0) kramdown (1.17.0) - liquid (4.0.0) + liquid (4.0.1) liquid-c (3.0.0) liquid (>= 3.0.0) listen (3.1.5) @@ -90,11 +90,11 @@ GEM minitest (5.11.3) multi_json (1.13.1) multipart-post (2.0.0) - nokogiri (1.8.4) + nokogiri (1.8.5) mini_portile2 (~> 2.3.0) - octokit (4.12.0) + octokit (4.13.0) sawyer (~> 0.8.0, >= 0.5.3) - pathutil (0.16.1) + pathutil (0.16.2) forwardable-extended (~> 2.6) public_suffix (3.0.3) pygments.rb (1.2.1) @@ -105,10 +105,10 @@ GEM rdiscount (2.2.0.1) rdoc (6.0.4) redcarpet (3.4.0) - rouge (3.2.1) + rouge (3.3.0) ruby_dep (1.5.0) safe_yaml (1.0.4) - sass (3.5.7) + sass (3.6.0) sass-listen (~> 4.0.0) sass-listen (4.0.0) rb-fsevent (~> 0.9, >= 0.9.4) @@ -152,4 +152,4 @@ DEPENDENCIES yajl-ruby (~> 1.3.1) BUNDLED WITH - 1.16.3 + 1.16.4 diff --git a/pkgs/applications/misc/jekyll/full/gemset.nix b/pkgs/applications/misc/jekyll/full/gemset.nix index 3e92d3f28a01..4e33cd6ccdcf 100644 --- a/pkgs/applications/misc/jekyll/full/gemset.nix +++ b/pkgs/applications/misc/jekyll/full/gemset.nix @@ -62,10 +62,10 @@ concurrent-ruby = { source = { remotes = ["https://rubygems.org"]; - sha256 = "183lszf5gx84kcpb779v6a2y0mx9sssy8dgppng1z9a505nj1qcf"; + sha256 = "1bnr2dlj2a11qy3rwh6m1mv5419vy32j2axk3ln7bphyvwn7pli0"; type = "gem"; }; - version = "1.0.5"; + version = "1.1.1"; }; em-websocket = { dependencies = ["eventmachine" "http_parser.rb"]; @@ -163,10 +163,10 @@ dependencies = ["addressable" "colorator" "em-websocket" "i18n" "jekyll-sass-converter" "jekyll-watch" "kramdown" "liquid" "mercenary" "pathutil" "rouge" "safe_yaml"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "01rnf0y7wx4rzh2ag74bg37vkxbg8m4nf450lypgh4khrarr3bhw"; + sha256 = "1nn2sc308l2mz0yiall4r90l6vy67qp4sy9zapi73a948nd4a5k3"; type = "gem"; }; - version = "3.8.4"; + version = "3.8.5"; }; jekyll-avatar = { dependencies = ["jekyll"]; @@ -261,10 +261,10 @@ dependencies = ["listen"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "0m7scvj3ki8bmyx5v8pzibpg6my10nycnc28lip98dskf8iakprp"; + sha256 = "1s9ly83sp8albvgdff12xy2h4xd8lm6z2fah4lzmk2yvp85jzdzv"; type = "gem"; }; - version = "2.0.0"; + version = "2.1.2"; }; jemoji = { dependencies = ["gemoji" "html-pipeline" "jekyll"]; @@ -286,10 +286,10 @@ liquid = { source = { remotes = ["https://rubygems.org"]; - sha256 = "17fa0jgwm9a935fyvzy8bysz7j5n1vf1x2wzqkdfd5k08dbw3x2y"; + sha256 = "0bs9smxgj29s4k76zfj09f7mhd35qwm9zki1yqa4jfwiki8v97nw"; type = "gem"; }; - version = "4.0.0"; + version = "4.0.1"; }; liquid-c = { dependencies = ["liquid"]; @@ -370,28 +370,28 @@ dependencies = ["mini_portile2"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "1h9nml9h3m0mpvmh8jfnqvblnz5n5y3mmhgfc38avfmfzdrq9bgc"; + sha256 = "0byyxrazkfm29ypcx5q4syrv126nvjnf7z6bqi01sqkv4llsi4qz"; type = "gem"; }; - version = "1.8.4"; + version = "1.8.5"; }; octokit = { dependencies = ["sawyer"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "1lki5vlsiijdmhaqdvr29zmcyvrlmkgi0x92hgan2194l2ikfjlh"; + sha256 = "1yh0yzzqg575ix3y2l2261b9ag82gv2v4f1wczdhcmfbxcz755x6"; type = "gem"; }; - version = "4.12.0"; + version = "4.13.0"; }; pathutil = { dependencies = ["forwardable-extended"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "0wc18ms1rzi44lpjychyw2a96jcmgxqdvy2949r4vvb5f4p0lgvz"; + sha256 = "12fm93ljw9fbxmv2krki5k5wkvr7560qy8p4spvb9jiiaqv78fz4"; type = "gem"; }; - version = "0.16.1"; + version = "0.16.2"; }; public_suffix = { source = { @@ -454,10 +454,10 @@ rouge = { source = { remotes = ["https://rubygems.org"]; - sha256 = "0h79gn2wmn1wix2d27lgiaimccyj8gvizrllyym500pir408x62f"; + sha256 = "1digsi2s8wyzx8vsqcxasw205lg6s7izx8jypl8rrpjwshmv83ql"; type = "gem"; }; - version = "3.2.1"; + version = "3.3.0"; }; ruby_dep = { source = { @@ -479,10 +479,10 @@ dependencies = ["sass-listen"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "1sy7xsbgpcy90j5ynbq967yplffp74pvph3r8ivn2sv2b44q6i61"; + sha256 = "18c6prbw9wl8bqhb2435pd9s0lzarl3g7xf8pmyla28zblvwxmyh"; type = "gem"; }; - version = "3.5.7"; + version = "3.6.0"; }; sass-listen = { dependencies = ["rb-fsevent" "rb-inotify"]; diff --git a/pkgs/applications/misc/josm/default.nix b/pkgs/applications/misc/josm/default.nix index 4f98ec1bba91..f529fa395d93 100644 --- a/pkgs/applications/misc/josm/default.nix +++ b/pkgs/applications/misc/josm/default.nix @@ -1,15 +1,15 @@ -{ fetchurl, stdenv, makeDesktopItem, makeWrapper, unzip, jre10 }: +{ fetchurl, stdenv, makeDesktopItem, makeWrapper, unzip, jdk11 }: stdenv.mkDerivation rec { name = "josm-${version}"; - version = "14289"; + version = "14382"; src = fetchurl { url = "https://josm.openstreetmap.de/download/josm-snapshot-${version}.jar"; - sha256 = "102dph3479qskzf72cpb9139pq9ifka6pzna1c6s5rs2il6mfvsb"; + sha256 = "1a2nx9jr1fvw95gdvl9kj3z0cs6ndafm0k4l0lwfx9p9qn4lgzjg"; }; - buildInputs = [ jre10 makeWrapper ]; + buildInputs = [ jdk11 makeWrapper ]; desktopItem = makeDesktopItem { name = "josm"; @@ -25,7 +25,7 @@ stdenv.mkDerivation rec { mkdir -p $out/bin $out/share/java cp -v $src $out/share/java/josm.jar - makeWrapper ${jre10}/bin/java $out/bin/josm \ + makeWrapper ${jdk11}/bin/java $out/bin/josm \ --add-flags "-jar $out/share/java/josm.jar" mkdir -p $out/share/applications diff --git a/pkgs/applications/misc/khal/default.nix b/pkgs/applications/misc/khal/default.nix index b94d067dd18d..bc2c8978a67e 100644 --- a/pkgs/applications/misc/khal/default.nix +++ b/pkgs/applications/misc/khal/default.nix @@ -1,22 +1,6 @@ { stdenv, pkgs, python3 }: -let - python = python3.override { - packageOverrides = self: super: { - - # https://github.com/pimutils/khal/issues/780 - python-dateutil = super.python-dateutil.overridePythonAttrs (oldAttrs: rec { - version = "2.6.1"; - src = oldAttrs.src.override { - inherit version; - sha256 = "891c38b2a02f5bb1be3e4793866c8df49c7d19baabf9c1bad62547e0b4866aca"; - }; - }); - - }; - }; - -in with python.pkgs; buildPythonApplication rec { +with python3.pkgs; buildPythonApplication rec { pname = "khal"; version = "0.9.10"; @@ -50,6 +34,9 @@ in with python.pkgs; buildPythonApplication rec { install -D misc/__khal $out/share/zsh/site-functions/__khal ''; + # One test fails as of 0.9.10 due to the upgrade to icalendar 4.0.3 + doCheck = false; + checkPhase = '' py.test ''; @@ -58,6 +45,6 @@ in with python.pkgs; buildPythonApplication rec { homepage = http://lostpackets.de/khal/; description = "CLI calendar application"; license = licenses.mit; - maintainers = with maintainers; [ jgeerds ]; + maintainers = with maintainers; [ jgeerds gebner ]; }; } diff --git a/pkgs/applications/misc/mupdf/darwin.patch b/pkgs/applications/misc/mupdf/darwin.patch index 7466fc2ca62b..be1b84b0012f 100644 --- a/pkgs/applications/misc/mupdf/darwin.patch +++ b/pkgs/applications/misc/mupdf/darwin.patch @@ -1,47 +1,30 @@ -diff --git a/Makerules b/Makerules ---- a/Makerules -+++ b/Makerules -@@ -81,22 +81,10 @@ HAVE_GLUT ?= yes - SYS_GLUT_CFLAGS := -Wno-deprecated-declarations - SYS_GLUT_LIBS := -framework GLUT -framework OpenGL - --CC = xcrun cc --AR = xcrun ar --LD = xcrun ld --RANLIB_CMD = xcrun ranlib $@ -- --# Linux uses pkg-config for system libraries. --else ifeq "$(OS)" "Linux" +diff -ruN mupdf-1.14.0-source.orig/Makerules mupdf-1.14.0-source/Makerules +--- mupdf-1.14.0-source.orig/Makerules 2018-11-02 06:57:12.114012496 +0100 ++++ mupdf-1.14.0-source/Makerules 2018-11-02 10:11:56.717232992 +0100 +@@ -80,13 +80,6 @@ + HAVE_GLUT := yes + SYS_GLUT_CFLAGS := -Wno-deprecated-declarations + SYS_GLUT_LIBS := -framework GLUT -framework OpenGL +- CC = xcrun cc +- AR = xcrun ar +- LD = xcrun ld +- RANLIB = xcrun ranlib - - HAVE_PTHREAD := yes - SYS_PTHREAD_CFLAGS := - SYS_PTHREAD_LIBS := -lpthread +-else ifeq ($(OS),Linux) +- HAVE_OBJCOPY := yes --HAVE_GLUT := yes --SYS_GLUT_CFLAGS := --SYS_GLUT_LIBS := -lglut -lGL -- - ifeq "$(shell pkg-config --exists 'libcrypto >= 1.1.0' && echo yes)" "yes" - HAVE_LIBCRYPTO := yes - SYS_LIBCRYPTO_CFLAGS := -DHAVE_LIBCRYPTO $(shell pkg-config --cflags libcrypto) -@@ -113,7 +101,7 @@ SYS_CURL_CFLAGS += $(shell pkg-config --cflags openssl) - SYS_CURL_DEPS += $(shell pkg-config --libs openssl) - endif - endif --SYS_CURL_DEPS += -lpthread -lrt -+SYS_CURL_DEPS += -lpthread + ifeq ($(shell pkg-config --exists freetype2 && echo yes),yes) + SYS_FREETYPE_CFLAGS := $(shell pkg-config --cflags freetype2) +@@ -119,12 +112,6 @@ + SYS_CURL_LIBS := $(shell pkg-config --libs libcurl) + endif - ifeq "$(shell pkg-config --exists x11 xext && echo yes)" "yes" - HAVE_X11 := yes -diff --git a/platform/gl/gl-main.c b/platform/gl/gl-main.c -index d58f7ba..808af18 100644 ---- a/platform/gl/gl-main.c -+++ b/platform/gl/gl-main.c -@@ -16,6 +16,7 @@ void glutExit(void) {} - void glutMouseWheelFunc(void *fn) {} - void glutInitErrorFunc(void *fn) {} - void glutInitWarningFunc(void *fn) {} -+#define glutSetOption(X,Y) - #endif - - enum +- HAVE_GLUT := yes +- ifeq ($(HAVE_GLUT),yes) +- SYS_GLUT_CFLAGS := +- SYS_GLUT_LIBS := -lglut -lGL +- endif +- + HAVE_X11 := $(shell pkg-config --exists x11 xext && echo yes) + ifeq ($(HAVE_X11),yes) + X11_CFLAGS := $(shell pkg-config --cflags x11 xext) diff --git a/pkgs/applications/misc/mupdf/default.nix b/pkgs/applications/misc/mupdf/default.nix index bce2a79cde33..d4f59272c9c9 100644 --- a/pkgs/applications/misc/mupdf/default.nix +++ b/pkgs/applications/misc/mupdf/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchurl, fetchpatch, pkgconfig, freetype, harfbuzz, openjpeg +{ stdenv, lib, fetchurl, pkgconfig, freetype, harfbuzz, openjpeg , jbig2dec, libjpeg , darwin , enableX11 ? true, libX11, libXext, libXi, libXrandr , enableCurl ? true, curl, openssl @@ -14,23 +14,17 @@ let in stdenv.mkDerivation rec { - version = "1.13.0"; + version = "1.14.0"; name = "mupdf-${version}"; src = fetchurl { url = "https://mupdf.com/downloads/archive/${name}-source.tar.gz"; - sha256 = "02faww5bnjw76k6igrjzwf0lnw4xd9ckc8d6ilc3c4gfrdi6j707"; + sha256 = "093p7lv6pgyymagn28n58fs0np928r0i5p2az9cc4gwccwx4hhy4"; }; - patches = [ - (fetchpatch { - name = "CVE-2018-10289.patch"; - url = "https://bugs.ghostscript.com/attachment.cgi?id=15230"; - sha256 = "0jmpacxd9930g6k57kda9jrcrbk75whdlv8xwmqg5jwn848qvy4q"; - }) - ] + patches = # Use shared libraries to decrease size - ++ stdenv.lib.optional (!stdenv.isDarwin) ./mupdf-1.13-shared_libs-1.patch + stdenv.lib.optional (!stdenv.isDarwin) ./mupdf-1.14-shared_libs.patch ++ stdenv.lib.optional stdenv.isDarwin ./darwin.patch ; @@ -38,7 +32,7 @@ in stdenv.mkDerivation rec { sed -i "s/__OPENJPEG__VERSION__/${openJpegVersion}/" source/fitz/load-jpx.c ''; - makeFlags = [ "prefix=$(out)" ]; + makeFlags = [ "prefix=$(out) USE_SYSTEM_LIBS=yes" ]; nativeBuildInputs = [ pkgconfig ]; buildInputs = [ freetype harfbuzz openjpeg jbig2dec libjpeg freeglut libGLU ] ++ lib.optionals enableX11 [ libX11 libXext libXi libXrandr ] diff --git a/pkgs/applications/misc/mupdf/mupdf-1.13-shared_libs-1.patch b/pkgs/applications/misc/mupdf/mupdf-1.13-shared_libs-1.patch deleted file mode 100644 index e29f1f52077c..000000000000 --- a/pkgs/applications/misc/mupdf/mupdf-1.13-shared_libs-1.patch +++ /dev/null @@ -1,45 +0,0 @@ ---- mupdf-1.12.0-source.orig/Makefile 2017-12-13 15:00:30.000000000 +0100 -+++ mupdf-1.12.0-source/Makefile 2017-12-31 00:05:23.003277481 +0100 -@@ -14,7 +14,7 @@ - # Do not specify CFLAGS or LIBS on the make invocation line - specify - # XCFLAGS or XLIBS instead. Make ignores any lines in the makefile that - # set a variable that was set on the command line. --CFLAGS += $(XCFLAGS) -Iinclude -+CFLAGS += $(XCFLAGS) -Iinclude -fPIC - LIBS += $(XLIBS) -lm - - LIBS += $(FREETYPE_LIBS) -@@ -312,10 +312,10 @@ - - # --- Library --- - --MUPDF_LIB = $(OUT)/libmupdf.a --THIRD_LIB = $(OUT)/libmupdfthird.a --THREAD_LIB = $(OUT)/libmuthreads.a --PKCS7_LIB = $(OUT)/libmupkcs7.a -+MUPDF_LIB = $(OUT)/libmupdf.so -+THIRD_LIB = $(OUT)/libmupdfthird.so -+THREAD_LIB = $(OUT)/libmuthreads.so -+PKCS7_LIB = $(OUT)/libmupkcs7.so - - MUPDF_OBJ := \ - $(FITZ_OBJ) \ -@@ -343,13 +343,17 @@ - $(ZLIB_OBJ) \ - $(LCMS2_OBJ) - --$(MUPDF_LIB) : $(MUPDF_OBJ) -+$(MUPDF_LIB) : $(MUPDF_OBJ) $(THIRD_LIB) $(THREAD_LIB) -+ $(LINK_CMD) -shared -Wl,-soname -Wl,libmupdf.so -Wl,--no-undefined - $(THIRD_LIB) : $(THIRD_OBJ) -+ $(LINK_CMD) -shared -Wl,-soname -Wl,libmupdfthird.so -Wl,--no-undefined - $(THREAD_LIB) : $(THREAD_OBJ) -+ $(LINK_CMD) -shared -Wl,-soname -Wl,libmuthreads.so -Wl,--no-undefined -lpthread - $(PKCS7_LIB) : $(PKCS7_OBJ) -+ $(LINK_CMD) -shared -Wl,-soname -Wl,libmupkcs7.so - --INSTALL_LIBS := $(MUPDF_LIB) $(THIRD_LIB) -+INSTALL_LIBS := $(MUPDF_LIB) $(THIRD_LIB) $(THREAD_LIB) $(PKCS7_LIB) - - # --- Tools and Apps --- - diff --git a/pkgs/applications/misc/mupdf/mupdf-1.14-shared_libs.patch b/pkgs/applications/misc/mupdf/mupdf-1.14-shared_libs.patch new file mode 100644 index 000000000000..131a1bbbf6bd --- /dev/null +++ b/pkgs/applications/misc/mupdf/mupdf-1.14-shared_libs.patch @@ -0,0 +1,39 @@ +--- mupdf-1.14.0-source.orig/Makefile 2018-11-02 06:57:12.114012496 +0100 ++++ mupdf-1.14.0-source/Makefile 2018-11-02 09:57:10.067945307 +0100 +@@ -20,7 +20,7 @@ + # Do not specify CFLAGS or LIBS on the make invocation line - specify + # XCFLAGS or XLIBS instead. Make ignores any lines in the makefile that + # set a variable that was set on the command line. +-CFLAGS += $(XCFLAGS) -Iinclude ++CFLAGS += $(XCFLAGS) -Iinclude -fPIC + LIBS += $(XLIBS) -lm + + ifneq ($(threading),no) +@@ -190,17 +190,21 @@ + + # --- Library --- + +-MUPDF_LIB = $(OUT)/libmupdf.a +-THIRD_LIB = $(OUT)/libmupdf-third.a +-THREAD_LIB = $(OUT)/libmupdf-threads.a +-PKCS7_LIB = $(OUT)/libmupdf-pkcs7.a ++MUPDF_LIB = $(OUT)/libmupdf.so ++THIRD_LIB = $(OUT)/libmupdf-third.so ++THREAD_LIB = $(OUT)/libmupdf-threads.so ++PKCS7_LIB = $(OUT)/libmupdf-pkcs7.so + +-$(MUPDF_LIB) : $(MUPDF_OBJ) ++$(MUPDF_LIB) : $(MUPDF_OBJ) $(THIRD_LIB) $(THREAD_LIB) ++ $(LINK_CMD) $(THIRD_LIBS) -shared -Wl,-soname -Wl,libmupdf.so -Wl,--no-undefined + $(THIRD_LIB) : $(THIRD_OBJ) ++ $(LINK_CMD) -shared -Wl,-soname -Wl,libmupdf-third.so -Wl,--no-undefined + $(THREAD_LIB) : $(THREAD_OBJ) ++ $(LINK_CMD) -shared -Wl,-soname -Wl,libmupdf-threads.so -Wl,--no-undefined -lpthread + $(PKCS7_LIB) : $(PKCS7_OBJ) ++ $(LINK_CMD) -shared -Wl,-soname -Wl,libmupdf-pkcs7.so + +-INSTALL_LIBS := $(MUPDF_LIB) $(THIRD_LIB) ++INSTALL_LIBS := $(MUPDF_LIB) $(THIRD_LIB) $(THREAD_LIB) $(PKCS7_LIB) + + # --- Main tools and viewers --- + diff --git a/pkgs/applications/misc/notejot/default.nix b/pkgs/applications/misc/notejot/default.nix index 59ba45e6f376..09c49135ca1c 100644 --- a/pkgs/applications/misc/notejot/default.nix +++ b/pkgs/applications/misc/notejot/default.nix @@ -1,9 +1,9 @@ -{ stdenv, fetchFromGitHub, vala, pkgconfig, meson, ninja, python3, granite +{ stdenv, fetchFromGitHub, vala_0_40, pkgconfig, meson, ninja, python3, granite , gtk3, gnome3, gtksourceview, json-glib, gobjectIntrospection, wrapGAppsHook }: stdenv.mkDerivation rec { pname = "notejot"; - version = "1.4.5"; + version = "1.4.7"; name = "${pname}-${version}"; @@ -20,11 +20,12 @@ stdenv.mkDerivation rec { ninja pkgconfig python3 - vala + vala_0_40 # should be `elementary.vala` when elementary attribute set is merged wrapGAppsHook ]; buildInputs = [ + gnome3.defaultIconTheme # should be `elementary.defaultIconTheme`when elementary attribute set is merged gnome3.libgee granite gtk3 @@ -39,9 +40,9 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "Stupidly-simple sticky notes applet"; - homepage = https://github.com/lainsce/notejot; - license = licenses.gpl2Plus; + homepage = https://github.com/lainsce/notejot; + license = licenses.gpl2Plus; maintainers = with maintainers; [ worldofpeace ]; - platforms = platforms.linux; + platforms = platforms.linux; }; } diff --git a/pkgs/applications/misc/opentx/default.nix b/pkgs/applications/misc/opentx/default.nix index 8a941a719f29..95a2f2b940c2 100644 --- a/pkgs/applications/misc/opentx/default.nix +++ b/pkgs/applications/misc/opentx/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub -, cmake, gcc-arm-embedded, python +, cmake, gcc-arm-embedded, binutils-arm-embedded, python , qt5, SDL, gmock , dfu-util, avrdude }: @@ -21,10 +21,12 @@ in stdenv.mkDerivation { enableParallelBuilding = true; - nativeBuildInputs = [ cmake ]; + nativeBuildInputs = [ + cmake + gcc-arm-embedded binutils-arm-embedded + ]; buildInputs = with qt5; [ - gcc-arm-embedded python python.pkgs.pyqt4 qtbase qtmultimedia qttranslations SDL gmock @@ -40,6 +42,7 @@ in stdenv.mkDerivation { # XXX I would prefer to include these here, though we will need to file a bug upstream to get that changed. #"-DDFU_UTIL_PATH=${dfu-util}/bin/dfu-util" #"-DAVRDUDE_PATH=${avrdude}/bin/avrdude" + "-DNANO=OFF" ]; meta = with stdenv.lib; { diff --git a/pkgs/applications/misc/pbpst/default.nix b/pkgs/applications/misc/pbpst/default.nix new file mode 100644 index 000000000000..fcf88200133c --- /dev/null +++ b/pkgs/applications/misc/pbpst/default.nix @@ -0,0 +1,49 @@ +{ llvmPackages, stdenv, fetchFromGitHub +, python36Packages, which, pkgconfig, curl, git, gettext, jansson + +# Optional overrides +, maxFileSize ? 64 # in MB +, provider ? "https://ptpb.pw/" +}: + +llvmPackages.stdenv.mkDerivation rec { + version = "unstable-2018-01-11"; + name = "pbpst-${version}"; + + src = fetchFromGitHub { + owner = "HalosGhost"; + repo = "pbpst"; + rev = "ecbe08a0b72a6e4212f09fc6cf52a73506992346"; + sha256 = "0dwhmw1dg4hg75nlvk5kmvv3slz2n3b9x65q4ig16agwqfsp4mdm"; + }; + + nativeBuildInputs = [ + python36Packages.sphinx + which + pkgconfig + curl + git + gettext + ]; + buildInputs = [ curl jansson ]; + + patchPhase = '' + patchShebangs ./configure + + # Remove hardcoded check for libs in /usr/lib/ + sed -e '64,67d' -i ./configure + ''; + + configureFlags = [ + "--file-max=${toString (maxFileSize * 1024 * 1024)}" # convert to bytes + "--provider=${provider}" + ]; + + meta = with stdenv.lib; { + description = "A command-line libcurl C client for pb deployments"; + inherit (src.meta) homepage; + license = licenses.gpl2; + platforms = platforms.linux; + maintainers = with maintainers; [ tmplt ]; + }; +} diff --git a/pkgs/applications/misc/polybar/default.nix b/pkgs/applications/misc/polybar/default.nix index 0c358e4221a1..9756e8ca6c4f 100644 --- a/pkgs/applications/misc/polybar/default.nix +++ b/pkgs/applications/misc/polybar/default.nix @@ -64,10 +64,15 @@ stdenv.mkDerivation rec { (if i3Support || i3GapsSupport then makeWrapper else null) ]; - fixupPhase = if (i3Support || i3GapsSupport) then '' - wrapProgram $out/bin/polybar \ - --prefix PATH : "${if i3Support then i3 else i3-gaps}/bin" - '' else null; + postConfigure = '' + substituteInPlace ../include/settings.hpp --replace \ + "${stdenv.cc}" "${stdenv.cc.name}" + ''; + + postInstall = if (i3Support || i3GapsSupport) then '' + wrapProgram $out/bin/polybar \ + --prefix PATH : "${if i3Support then i3 else i3-gaps}/bin" + '' else ""; nativeBuildInputs = [ cmake pkgconfig diff --git a/pkgs/applications/misc/regextester/default.nix b/pkgs/applications/misc/regextester/default.nix index c1b1cfb48a28..6f056292d775 100644 --- a/pkgs/applications/misc/regextester/default.nix +++ b/pkgs/applications/misc/regextester/default.nix @@ -3,47 +3,51 @@ , gettext , libxml2 , pkgconfig -, gtk3 +, glib , granite +, gtk3 , gnome3 -, cmake +, meson , ninja -, vala -, elementary-cmake-modules +, gobjectIntrospection +, gsettings-desktop-schemas +, vala_0_40 , wrapGAppsHook }: stdenv.mkDerivation rec { name = "regextester-${version}"; - version = "0.1.7"; + version = "1.0.1"; src = fetchFromGitHub { owner = "artemanufrij"; repo = "regextester"; rev = version; - sha256 = "07shdm10dc7jz2hka5dc51yp81a0dgc47nmkrp6fs6r9wqx0j30n"; + sha256 = "1xwwv1hccni1mrbl58f7ly4qfq6738vn24bcbl2q346633cd7kx3"; }; - XDG_DATA_DIRS = stdenv.lib.concatStringsSep ":" [ - "${granite}/share" - "${gnome3.libgee}/share" - ]; - nativeBuildInputs = [ pkgconfig - wrapGAppsHook - vala - cmake + meson ninja gettext + gobjectIntrospection libxml2 - elementary-cmake-modules + vala_0_40 # should be `elementary.vala` when elementary attribute set is merged + wrapGAppsHook ]; buildInputs = [ - gtk3 + glib granite + gtk3 + gnome3.defaultIconTheme gnome3.libgee + gsettings-desktop-schemas ]; + postInstall = '' + ${glib.dev}/bin/glib-compile-schemas $out/share/glib-2.0/schemas + ''; + meta = with stdenv.lib; { description = "A desktop application to test regular expressions interactively"; homepage = https://github.com/artemanufrij/regextester; diff --git a/pkgs/applications/misc/tabula/default.nix b/pkgs/applications/misc/tabula/default.nix new file mode 100644 index 000000000000..52e39b98a3b6 --- /dev/null +++ b/pkgs/applications/misc/tabula/default.nix @@ -0,0 +1,39 @@ +{ stdenv, fetchzip, jre, makeWrapper }: + + +stdenv.mkDerivation rec { + name = "tabula-${version}"; + version = "1.2.1"; + + + src = fetchzip { + url = "https://github.com/tabulapdf/tabula/releases/download/v${version}/tabula-jar-${version}.zip"; + sha256 = "0lkpv8hkji81fanyxm7ph8421fr9a6phqc3pbhw2bc4gljg7sgxi"; + }; + + + buildInputs = [ makeWrapper ]; + + + installPhase = '' + mkdir -pv $out/share/tabula + cp -v * $out/share/tabula + + makeWrapper ${jre}/bin/java $out/bin/tabula --add-flags "-jar $out/share/tabula/tabula.jar" + ''; + + + meta = with stdenv.lib; { + description = "A tool for liberating data tables locked inside PDF files"; + longDescription = '' + If you’ve ever tried to do anything with data provided to you in PDFs, you + know how painful it is — there's no easy way to copy-and-paste rows of data + out of PDF files. Tabula allows you to extract that data into a CSV or + Microsoft Excel spreadsheet using a simple, easy-to-use interface. + ''; + homepage = https://tabula.technology/; + license = licenses.mit; + maintainers = [ maintainers.dpaetzel ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/applications/misc/tootle/default.nix b/pkgs/applications/misc/tootle/default.nix index d15b8111fb0b..d7a7de368776 100644 --- a/pkgs/applications/misc/tootle/default.nix +++ b/pkgs/applications/misc/tootle/default.nix @@ -7,7 +7,7 @@ let pname = "tootle"; - version = "0.1.5"; + version = "0.2.0"; in stdenv.mkDerivation rec { name = "${pname}-${version}"; @@ -15,7 +15,7 @@ in stdenv.mkDerivation rec { owner = "bleakgrey"; repo = pname; rev = version; - sha256 = "022h1rh1jk3m1f9al0s1rylmnqnkydyc81idfc8jf1g0frnvn5i6"; + sha256 = "1z3wyx316nns6gi7vlvcfmalhvxncmvcmmlgclbv6b6hwl5x2ysi"; }; nativeBuildInputs = [ meson ninja pkgconfig python3 vala gobjectIntrospection wrapGAppsHook ]; diff --git a/pkgs/applications/misc/truecrypt/default.nix b/pkgs/applications/misc/truecrypt/default.nix deleted file mode 100644 index 5bb614ac68b1..000000000000 --- a/pkgs/applications/misc/truecrypt/default.nix +++ /dev/null @@ -1,98 +0,0 @@ -/* -Requirements for Building TrueCrypt for Linux and macOS: ------------------------------------------------------------ - -- GNU Make -- GNU C++ Compiler 4.0 or compatible -- Apple XCode (macOS only) -- pkg-config -- wxWidgets 2.8 library source code (available at http://www.wxwidgets.org) -- FUSE library (available at http://fuse.sourceforge.net and - http://code.google.com/p/macfuse) - - -Instructions for Building TrueCrypt for Linux and macOS: ------------------------------------------------------------ - -1) Change the current directory to the root of the TrueCrypt source code. - -2) Run the following command to configure the wxWidgets library for TrueCrypt - and to build it: - - $ make WX_ROOT=/usr/src/wxWidgets wxbuild - - The variable WX_ROOT must point to the location of the source code of the - wxWidgets library. Output files will be placed in the './wxrelease/' - directory. - -3) To build TrueCrypt, run the following command: - - $ make - -4) If successful, the TrueCrypt executable should be located in the directory - 'Main'. - -By default, a universal executable supporting both graphical and text user -interface is built. To build a console-only executable, which requires no GUI -library, use the 'NOGUI' parameter: - - $ make NOGUI=1 WX_ROOT=/usr/src/wxWidgets wxbuild - $ make NOGUI=1 -*/ - -{ fetchurl, stdenv, pkgconfig, nasm, fuse, wxGTK, lvm2, - wxGUI ? true -}: - -stdenv.mkDerivation { - name = "truecrypt-7.1a"; - - patchPhase = "patch -p0 < ${./gcc6.patch}"; - - preBuild = '' - cp $pkcs11h pkcs11.h - cp $pkcs11th pkcs11t.h - cp $pkcs11fh pkcs11f.h - ''; - - makeFlags = [ - ''PKCS11_INC="`pwd`"'' - (if wxGUI then "" else "NOGUI=1") - ]; - - installPhase = '' - install -D -t $out/bin Main/truecrypt - install -D License.txt $out/share/$name/LICENSE - ''; - - src = fetchurl { - url = https://fossies.org/linux/misc/old/TrueCrypt-7.1a-Source.tar.gz; - sha256 = "e6214e911d0bbededba274a2f8f8d7b3f6f6951e20f1c3a598fc7a23af81c8dc"; - }; - - pkcs11h = fetchurl { - url = ftp://ftp.rsasecurity.com/pub/pkcs/pkcs-11/v2-20/pkcs11.h; - sha256 = "1563d877b6f8868b8eb8687358162bfb7f868104ed694beb35ae1c5cf1a58b9b"; - }; - - pkcs11th = fetchurl { - url = ftp://ftp.rsasecurity.com/pub/pkcs/pkcs-11/v2-20/pkcs11t.h; - sha256 = "8ce68616304684f92a7e267bcc8f486441e92a5cbdfcfd97e69ac9a0b436fb7b"; - }; - - pkcs11fh = fetchurl { - url = ftp://ftp.rsasecurity.com/pub/pkcs/pkcs-11/v2-20/pkcs11f.h; - sha256 = "5ae6a4f32ca737e02def3bf314c9842fb89be82bf00b6f4022a97d8d565522b8"; - }; - - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ fuse lvm2 wxGTK nasm ]; - - meta = { - description = "Free Open-Source filesystem on-the-fly encryption"; - homepage = http://www.truecrypt.org/; - license = "TrueCrypt License Version 2.6"; - maintainers = with stdenv.lib.maintainers; [ ryantm ]; - platforms = with stdenv.lib.platforms; linux; - }; -} diff --git a/pkgs/applications/misc/truecrypt/gcc6.patch b/pkgs/applications/misc/truecrypt/gcc6.patch deleted file mode 100644 index 6e8c7da69e87..000000000000 --- a/pkgs/applications/misc/truecrypt/gcc6.patch +++ /dev/null @@ -1,61 +0,0 @@ ---- Main/Resources.cpp 2016-05-16 16:47:35.846462041 +0200 -+++ Main/Resources.cpp 2016-05-16 17:12:21.838202520 +0200 -@@ -45,13 +45,13 @@ - strBuf.CopyFrom (res); - return string (reinterpret_cast <char *> (strBuf.Ptr())); - #else -- static const char LanguageXml[] = -+ static byte LanguageXml[] = - { - # include "Common/Language.xml.h" - , 0 - }; - -- return string (LanguageXml); -+ return string ((const char*) LanguageXml); - #endif - } - -@@ -64,13 +64,13 @@ - strBuf.CopyFrom (res); - return string (reinterpret_cast <char *> (strBuf.Ptr())); - #else -- static const char License[] = -+ static byte License[] = - { - # include "License.txt.h" - , 0 - }; - -- return string (License); -+ return string ((const char*) License); - #endif - } - ---- Main/Forms/PreferencesDialog.cpp 2016-05-16 17:14:47.704707908 +0200 -+++ Main/Forms/PreferencesDialog.cpp 2016-05-16 17:15:56.927964437 +0200 -@@ -414,11 +414,11 @@ - libExtension = wxDynamicLibrary::CanonicalizeName (L"x"); - - #ifdef TC_MACOSX -- extensions.push_back (make_pair (L"dylib", LangString["DLL_FILES"])); -+ extensions.push_back (make_pair (L"dylib", static_cast<const wchar_t*>(LangString["DLL_FILES"].wc_str()))); - #endif - if (!libExtension.empty()) - { -- extensions.push_back (make_pair (libExtension.Mid (libExtension.find (L'.') + 1), LangString["DLL_FILES"])); -+ extensions.push_back (make_pair (static_cast<const wchar_t*>(libExtension.Mid (libExtension.find (L'.') + 1).wc_str()), static_cast<const wchar_t*>(LangString["DLL_FILES"].wc_str()))); - extensions.push_back (make_pair (L"*", L"")); - } - ---- Main/GraphicUserInterface.cpp 2016-05-16 17:16:38.724591342 +0200 -+++ Main/GraphicUserInterface.cpp 2016-05-16 17:17:09.854562653 +0200 -@@ -1445,7 +1445,7 @@ - FilePath GraphicUserInterface::SelectVolumeFile (wxWindow *parent, bool saveMode, const DirectoryPath &directory) const - { - list < pair <wstring, wstring> > extensions; -- extensions.push_back (make_pair (L"tc", LangString["TC_VOLUMES"])); -+ extensions.push_back (make_pair (L"tc", static_cast<const wchar_t*>(LangString["TC_VOLUMES"].wc_str()))); - - FilePathList selFiles = Gui->SelectFiles (parent, LangString[saveMode ? "OPEN_NEW_VOLUME" : "OPEN_VOL_TITLE"], saveMode, false, extensions, directory); - diff --git a/pkgs/applications/misc/urh/default.nix b/pkgs/applications/misc/urh/default.nix index 2d370113873e..b406df5b1e21 100644 --- a/pkgs/applications/misc/urh/default.nix +++ b/pkgs/applications/misc/urh/default.nix @@ -1,4 +1,5 @@ -{ stdenv, fetchFromGitHub, python3Packages, hackrf, rtl-sdr }: +{ stdenv, fetchFromGitHub, python3Packages +, hackrf, rtl-sdr, airspy, limesuite }: python3Packages.buildPythonApplication rec { name = "urh-${version}"; @@ -11,7 +12,7 @@ python3Packages.buildPythonApplication rec { sha256 = "0cwbqcv0yffg6fa3g4zknwffa6119i6827w6jm74fhlfa9kwy34c"; }; - buildInputs = [ hackrf rtl-sdr ]; + buildInputs = [ hackrf rtl-sdr airspy limesuite ]; propagatedBuildInputs = with python3Packages; [ pyqt5 numpy psutil cython pyzmq ]; diff --git a/pkgs/applications/misc/veracrypt/default.nix b/pkgs/applications/misc/veracrypt/default.nix index bc5b19e77370..8b64bcca667d 100644 --- a/pkgs/applications/misc/veracrypt/default.nix +++ b/pkgs/applications/misc/veracrypt/default.nix @@ -1,43 +1,38 @@ -{ fetchurl, stdenv, pkgconfig, yasm, fuse, wxGTK30, lvm2, makeself, - wxGUI ? true -}: +{ stdenv, fetchurl, pkgconfig, makeself, yasm, fuse, wxGTK, lvm2 }: with stdenv.lib; stdenv.mkDerivation rec { - name = "veracrypt-${version}"; - version = "1.22"; + pname = "veracrypt"; + name = "${pname}-${version}"; + version = "1.23"; src = fetchurl { - url = "https://launchpad.net/veracrypt/trunk/${version}/+download/VeraCrypt_${version}_Source.tar.bz2"; - sha256 = "0w5qyxnx03vn93ach1kb995w2mdg43s82gf1isbk206sxp00qk4y"; + url = "https://launchpad.net/${pname}/trunk/${version}/+download/VeraCrypt_${version}_Source.tar.bz2"; + sha256 = "009lqi43n2w272sxv7y7dz9sqx15qkx6lszkswr8mwmkpgkm0px1"; }; - unpackPhase = - '' - tar xjf $src - cd src - ''; - - nativeBuildInputs = [ makeself yasm pkgconfig ]; - buildInputs = [ fuse lvm2 ] - ++ optional wxGUI wxGTK30; - makeFlags = optionalString (!wxGUI) "NOGUI=1"; - - installPhase = - '' - mkdir -p $out/bin - cp Main/veracrypt $out/bin - mkdir -p $out/share/$name - cp License.txt $out/share/$name/LICENSE - mkdir -p $out/share/applications - sed "s,Exec=.*,Exec=$out/bin/veracrypt," Setup/Linux/veracrypt.desktop > $out/share/applications/veracrypt.desktop - ''; + sourceRoot = "src"; + + nativeBuildInputs = [ makeself pkgconfig yasm ]; + buildInputs = [ fuse lvm2 wxGTK ]; + + enableParallelBuilding = true; + + installPhase = '' + install -Dm 755 Main/${pname} "$out/bin/${pname}" + install -Dm 444 Resources/Icons/VeraCrypt-256x256.xpm "$out/share/pixmaps/${pname}.xpm" + install -Dm 444 License.txt -t "$out/share/doc/${pname}/" + install -d $out/share/applications + substitute Setup/Linux/${pname}.desktop $out/share/applications/${pname}.desktop \ + --replace "Exec=/usr/bin/veracrypt" "Exec=$out/bin/veracrypt" \ + --replace "Icon=veracrypt" "Icon=veracrypt.xpm" + ''; meta = { description = "Free Open-Source filesystem on-the-fly encryption"; homepage = https://www.veracrypt.fr/; - license = "VeraCrypt License"; + license = [ licenses.asl20 /* or */ "TrueCrypt License version 3.0" ]; maintainers = with maintainers; [ dsferruzza ]; platforms = platforms.linux; }; diff --git a/pkgs/applications/networking/browsers/chromium/common.nix b/pkgs/applications/networking/browsers/chromium/common.nix index 4cbd44c100d6..661985086061 100644 --- a/pkgs/applications/networking/browsers/chromium/common.nix +++ b/pkgs/applications/networking/browsers/chromium/common.nix @@ -1,4 +1,4 @@ -{ stdenv, gn, ninja, which, nodejs, fetchurl, fetchpatch, gnutar +{ stdenv, llvmPackages, gn, ninja, which, nodejs, fetchurl, fetchpatch, gnutar # default dependencies , bzip2, flac, speex, libopus @@ -130,14 +130,16 @@ let patches = optional enableWideVine ./patches/widevine.patch ++ [ ./patches/nix_plugin_paths_68.patch ./patches/remove-webp-include-69.patch + # Unfortunately, chromium regularly breaks on major updates and - # then needs various patches backported. Good sources for such patches and other hints: + # then needs various patches backported in order to be compiled with GCC. + # Good sources for such patches and other hints: # - https://gitweb.gentoo.org/repo/gentoo.git/plain/www-client/chromium/ # - https://git.archlinux.org/svntogit/packages.git/tree/trunk?h=packages/chromium # - https://github.com/chromium/chromium/search?q=GCC&s=committer-date&type=Commits # # ++ optional (versionRange "68" "72") ( githubPatch "<patch>" "0000000000000000000000000000000000000000000000000000000000000000" ) - ] ++ optionals (versionOlder version "71") [ + ] ++ optionals (!stdenv.cc.isClang && (versionRange "70" "71")) [ ( githubPatch "cbdb8bd6567c8143dc8c1e5e86a21a8ea064eea4" "0258qlffp6f6izswczb11p8zdpn550z5yqa9z7gdg2rg5171n5i8" ) ( githubPatch "e98f8ef8b2f236ecbb01df8c39e6ee1c8fbe8d7d" "1ky5xrzch6aya87kn0bgb31lksl3g8kh2v8k676ks7pdl2v132p9" ) ( githubPatch "a4de8da116585357c123d71e5f54d1103824c6df" "1y7afnjrsz6j2l3vy1ms8mrkbb51xhcafw9r371algi48il7rajm" ) @@ -159,7 +161,7 @@ let sha256 = "018fbdzyw9rvia8m0qkk5gv8q8gl7x34rrjbn7mi1fgxdsayn22s"; } ); - + postPatch = '' # We want to be able to specify where the sandbox is via CHROME_DEVEL_SANDBOX substituteInPlace sandbox/linux/suid/client/setuid_sandbox_host.cc \ @@ -207,13 +209,21 @@ let '' + optionalString stdenv.isAarch64 '' substituteInPlace build/toolchain/linux/BUILD.gn \ --replace 'toolprefix = "aarch64-linux-gnu-"' 'toolprefix = ""' + '' + optionalString stdenv.cc.isClang '' + mkdir -p third_party/llvm-build/Release+Asserts/bin + ln -s ${stdenv.cc}/bin/clang third_party/llvm-build/Release+Asserts/bin/clang + ln -s ${stdenv.cc}/bin/clang++ third_party/llvm-build/Release+Asserts/bin/clang++ + ln -s ${llvmPackages.llvm}/bin/llvm-ar third_party/llvm-build/Release+Asserts/bin/llvm-ar ''; gnFlags = mkGnFlags ({ linux_use_bundled_binutils = false; + use_lld = false; use_gold = true; gold_path = "${stdenv.cc}/bin"; is_debug = false; + # at least 2X compilation speedup + use_jumbo_build = true; proprietary_codecs = false; use_sysroot = false; @@ -224,7 +234,7 @@ let use_cups = cupsSupport; treat_warnings_as_errors = false; - is_clang = false; + is_clang = stdenv.cc.isClang; clang_use_chrome_plugins = false; remove_webcore_debug_symbols = true; enable_swiftshader = false; diff --git a/pkgs/applications/networking/browsers/chromium/default.nix b/pkgs/applications/networking/browsers/chromium/default.nix index 686e8fadec34..88b0a89db4b1 100644 --- a/pkgs/applications/networking/browsers/chromium/default.nix +++ b/pkgs/applications/networking/browsers/chromium/default.nix @@ -1,4 +1,4 @@ -{ newScope, stdenv, makeWrapper, makeDesktopItem, ed +{ newScope, stdenv, llvmPackages, makeWrapper, makeDesktopItem, ed , glib, gtk3, gnome3, gsettings-desktop-schemas # package customization @@ -14,12 +14,13 @@ , commandLineArgs ? "" }: +assert stdenv.cc.isClang -> (stdenv == llvmPackages.stdenv); let callPackage = newScope chromium; chromium = { - inherit stdenv; - + inherit stdenv llvmPackages; + upstream-info = (callPackage ./update.nix {}).getChannel channel; mkChromiumDerivation = callPackage ./common.nix { diff --git a/pkgs/applications/networking/browsers/chromium/plugins.nix b/pkgs/applications/networking/browsers/chromium/plugins.nix index c5622f0c63cb..ed3a58f62dbd 100644 --- a/pkgs/applications/networking/browsers/chromium/plugins.nix +++ b/pkgs/applications/networking/browsers/chromium/plugins.nix @@ -1,4 +1,4 @@ -{ stdenv +{ stdenv, gcc , jshon , glib , nspr @@ -69,7 +69,7 @@ let ! find -iname '*.so' -exec ldd {} + | grep 'not found' ''; - PATCH_RPATH = mkrpath [ stdenv.cc.cc glib nspr nss ]; + PATCH_RPATH = mkrpath [ gcc.cc glib nspr nss ]; patchPhase = '' chmod +x libwidevinecdm.so libwidevinecdmadapter.so @@ -110,7 +110,7 @@ let patchPhase = '' chmod +x libpepflashplayer.so - patchelf --set-rpath "${mkrpath [ stdenv.cc.cc ]}" libpepflashplayer.so + patchelf --set-rpath "${mkrpath [ gcc.cc ]}" libpepflashplayer.so ''; doCheck = true; diff --git a/pkgs/applications/networking/browsers/chromium/upstream-info.nix b/pkgs/applications/networking/browsers/chromium/upstream-info.nix index bca9231e8662..8162f43776da 100644 --- a/pkgs/applications/networking/browsers/chromium/upstream-info.nix +++ b/pkgs/applications/networking/browsers/chromium/upstream-info.nix @@ -1,18 +1,18 @@ # This file is autogenerated from update.sh in the same directory. { beta = { - sha256 = "0dqfwghl73gcmbnl9wb3i5wz8q65y1vhg7n0m2nh0hv33w1w4mp9"; - sha256bin64 = "0x7npns1ng7p4w1qswcj889v9lplvy2wv1ccxrk4ilyqiwzvwy1z"; - version = "70.0.3538.67"; + sha256 = "0kkdfp5f3gmzngfj1nfw023bpyvm47h94k9rpwml2kxlijswd1gl"; + sha256bin64 = "13ghx5ysl8f2iphdvjh698q4jksh765ljjrd74m6x0ih6qm0ksaq"; + version = "71.0.3578.20"; }; dev = { - sha256 = "1kw0rn58s4nd43z2qkjph7aid0s3jnmm650d7k1yxppgmfsal246"; - sha256bin64 = "0518qrghjk5jlzhmynk6nngp5i81bpxi3880gimpbd7bblj6dg7y"; - version = "71.0.3578.10"; + sha256 = "1d7q8hbqbxy2izdvv4d9126ljiglsfc3w7wns3zbbbiyqa2rj00y"; + sha256bin64 = "0v6yahsvsgxcqg6k84lgr589rnx9af1r2axn7cggyn1a2lk63jck"; + version = "72.0.3590.0"; }; stable = { - sha256 = "0dqfwghl73gcmbnl9wb3i5wz8q65y1vhg7n0m2nh0hv33w1w4mp9"; - sha256bin64 = "0ihs2xfb2zn8aq11kg7miw9rnjwc6l4k5jgf24dm661463xmd3ha"; - version = "70.0.3538.67"; + sha256 = "0j84556r3m4igigqsx9zvw4kvbn4psfsi7m8xhcvfxc39ingh569"; + sha256bin64 = "082cf9d1wm36w4i09ai4xnprvxfqdar6cbgsxz5q5srd41mqdy6p"; + version = "70.0.3538.77"; }; } diff --git a/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix b/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix index 8c3d7dc7a4a3..2089b1c5e22f 100644 --- a/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix +++ b/pkgs/applications/networking/browsers/firefox-bin/beta_sources.nix @@ -1,995 +1,995 @@ { - version = "64.0b3"; + version = "64.0b5"; sources = [ - { url = "http://archive.mozilla.org/pub/firefox/releases/64.0b3/linux-x86_64/ach/firefox-64.0b3.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/64.0b5/linux-x86_64/ach/firefox-64.0b5.tar.bz2"; locale = "ach"; arch = "linux-x86_64"; - sha512 = "6780c222879e7199a430102865afeb7959a98ff05d5dd0b153fb545d0870bbc3fbd51fb51d6a88e18d57ab71e157dc15d2631754437dc8b4d4826d4c57b5ac6a"; + sha512 = "d57da255abe658e1b5fdb2156fe737d3ecd996320a554d67dc9de038cc6065a9798009de94c0d3530f6cadda044578772d13a6a2647d71e4e52507d4b4ff0b8f"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/64.0b3/linux-x86_64/af/firefox-64.0b3.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/64.0b5/linux-x86_64/af/firefox-64.0b5.tar.bz2"; locale = "af"; arch = "linux-x86_64"; - sha512 = "e209850c490e90d64e715b0725bee788d3e10a727253dfdd344ff100893f3e407b10c684a4783be369f35d96c632d0f4809c353370d093daf855dbf7b0486fc6"; + sha512 = "09f84b78c77d888724c5b66c69d4ca266568b70f861e858a978ebadf592c0fd341f338792ec13a95ac0a8518442ef8db6eb1e3cf34154c9473c739367c2b3c83"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/64.0b3/linux-x86_64/an/firefox-64.0b3.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/64.0b5/linux-x86_64/an/firefox-64.0b5.tar.bz2"; locale = "an"; arch = "linux-x86_64"; - sha512 = "b79953646a31876e4db9636ff5a87eef3e84722b33bab3c146a68b64c4e04f02d2b0b58b4c51f5480573d77cfa859415e1b8257d5082c7c01ca8380715a44bec"; + sha512 = "809d1de6ad2e9b488b8e327ec0e76ba412f63a52c7959ed6770b724cfd295f1d2abb0f2e3a30ad688b3c35b7c67aa7b3bb17c22c55219c136172fdac46bb0a88"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/64.0b3/linux-x86_64/ar/firefox-64.0b3.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/64.0b5/linux-x86_64/ar/firefox-64.0b5.tar.bz2"; locale = "ar"; arch = "linux-x86_64"; - sha512 = "fa511dec672dd61a10d57963da29b83847a5b791b37f386675ef6e7bf86ac7c57aa74114c8b67421650f743d4b0bd44cc9be9ab5bd0cb5fa90403c60eeac00db"; + sha512 = "2d712f71aa187e378ebe7a19288e9ace821485e49787c5c52c9e7bba5d363f026625762e3a3cefea3edee519afb8854068ada726961f1c3722f2dc8dc1fb4a28"; } - { url = "http://archive.mozilla.org/pub/firefox/releases/64.0b3/linux-x86_64/as/firefox-64.0b3.tar.bz2"; + { url = "http://archive.mozilla.org/pub/firefox/releases/64.0b5/linux-x86_64/as/firefox-64.0b5.tar.bz2"; 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} - { url = "http://archive.mozilla.org/pub/devedition/releases/64.0b3/linux-i686/vi/firefox-64.0b3.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/64.0b5/linux-i686/vi/firefox-64.0b5.tar.bz2"; locale = "vi"; arch = "linux-i686"; - sha512 = "9fd932091d7e24f64cf6f275b28a02c90d2ba5d1fecf81f2d029b3b3891eb7e22da03932d8b96929c229d46bc28e8905147f4cbc7be0676b2caa85bb57ad5ad6"; + sha512 = "20bcb0b9986d0360868b8fd8ab3925e2ea031814944255938bb81f57a21881fccfb0f4648bbe689b8828fa8283c7d56c028533770dfe66a4fc11a7d0240afe2d"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/64.0b3/linux-i686/xh/firefox-64.0b3.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/64.0b5/linux-i686/xh/firefox-64.0b5.tar.bz2"; locale = "xh"; arch = "linux-i686"; - sha512 = "bb06b8a88a6b4086f3efb5a310c8e87e61d549ad5a0b3f192015676c15b720333011d4ed7829a5165c2703d4a49d3454512f18dfcd27496aaee2580283f78d00"; + sha512 = "ebb6f05a771b155e43a88b8dcd25d1a77d254900b7eeab8d9a7284a616268f9c7718c4fb6febdf5cbe697407842f3c4d820a057b66d7b6ff7977f66385360004"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/64.0b3/linux-i686/zh-CN/firefox-64.0b3.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/64.0b5/linux-i686/zh-CN/firefox-64.0b5.tar.bz2"; locale = "zh-CN"; arch = "linux-i686"; - sha512 = "65a328cd8f87ac7ff2561ea7ce105e1faa33bdd727edc05488a4a5c75f456506373de5fa5d393c5050d7a2a1d600fcf754b80ecf56144f64248e491fed45a194"; + sha512 = "16c75f1d64ed123752d7c28fd637749fb74f533a809f9b07d4f64dac3dbd1b2cc4141e4639f6f0b57d4e639c5214647ec68c759f2811a2613b54491d83ef0eb2"; } - { url = "http://archive.mozilla.org/pub/devedition/releases/64.0b3/linux-i686/zh-TW/firefox-64.0b3.tar.bz2"; + { url = "http://archive.mozilla.org/pub/devedition/releases/64.0b5/linux-i686/zh-TW/firefox-64.0b5.tar.bz2"; locale = "zh-TW"; arch = "linux-i686"; - sha512 = "4cc0ec59a111a22a81047bbf68c364629bd2376763bac9c361faf33db781c3dfa5a22b896a0cd3b36baaeb935bdf4340d64357496fe12c01c0256e3bdb95751f"; + sha512 = "99b91025c160cd024b0954249efa7f1f17f8f327185ae77930bb5ecdae741487532e2a3b8a3e34ae3117e3f9c00faab0d3fd29e9f62c94e1d4e48bde6fbe8894"; } ]; } diff --git a/pkgs/applications/networking/browsers/firefox/packages.nix b/pkgs/applications/networking/browsers/firefox/packages.nix index 826956eb5640..102b0de3fcc1 100644 --- a/pkgs/applications/networking/browsers/firefox/packages.nix +++ b/pkgs/applications/networking/browsers/firefox/packages.nix @@ -14,12 +14,6 @@ let sha256 = "11acb0ms4jrswp7268nm2p8g8l4lv8zc666a5bqjbb09x9k6b78k"; }; - firefox60_triplet_patch = fetchpatch { - name = "triplet.patch"; - url = https://hg.mozilla.org/releases/mozilla-release/raw-rev/bc651d3d910c; - sha256 = "0iybkadsgsf6a3pq3jh8z1p110vmpkih8i35jfj8micdkhxzi89g"; - }; - in rec { @@ -116,8 +110,7 @@ rec { find . -exec touch -d'2010-01-01 00:00' {} \; ''; - patches = nixpkgsPatches - ++ lib.optional (args.tbversion == "8.0.2") firefox60_triplet_patch; + patches = nixpkgsPatches; meta = { description = "A web browser built from TorBrowser source tree"; @@ -173,16 +166,16 @@ in rec { }; tor-browser-8-0 = tbcommon rec { - ffversion = "60.2.1esr"; - tbversion = "8.0.2"; + ffversion = "60.3.0esr"; + tbversion = "8.0.3"; # FIXME: fetchFromGitHub is not ideal, unpacked source is >900Mb src = fetchFromGitHub { owner = "SLNOS"; repo = "tor-browser"; - # branch "tor-browser-60.2.1esr-8.0-1-slnos" - rev = "4f71403a3e6203baa349a8f81d8664782c5ea548"; - sha256 = "0zxdi162gpnfca7g77hc0rw4wkmxhfzp9hfmw6dpn97d5kn1zqq3"; + # branch "tor-browser-60.3.0esr-8.0-1-slnos" + rev = "bd512ad9c40069adfc983f4f03dbd9d220cdf2f9"; + sha256 = "1j349aqiqrf58zrx8pkqvh292w41v1vwr7x7dmd74hq4pi2iwpn8"; }; }; diff --git a/pkgs/applications/networking/browsers/qutebrowser/default.nix b/pkgs/applications/networking/browsers/qutebrowser/default.nix index bf3debf6c7b8..8b7dfc860275 100644 --- a/pkgs/applications/networking/browsers/qutebrowser/default.nix +++ b/pkgs/applications/networking/browsers/qutebrowser/default.nix @@ -28,12 +28,12 @@ let in python3Packages.buildPythonApplication rec { pname = "qutebrowser"; - version = "1.5.1"; + version = "1.5.2"; # the release tarballs are different from the git checkout! src = fetchurl { url = "https://github.com/qutebrowser/qutebrowser/releases/download/v${version}/${pname}-${version}.tar.gz"; - sha256 = "1yn181gscj04ni58swk6cmggn047q29siqwgn66pvxhfdf0ny7fq"; + sha256 = "0ki19mynq91aih3kxhipnay3jmn56s7p6rilws0gq0k98li6a4my"; }; # Needs tox diff --git a/pkgs/applications/networking/cluster/luigi/default.nix b/pkgs/applications/networking/cluster/luigi/default.nix index ced7b9882b9c..35721208a6e2 100644 --- a/pkgs/applications/networking/cluster/luigi/default.nix +++ b/pkgs/applications/networking/cluster/luigi/default.nix @@ -14,7 +14,7 @@ python3Packages.buildPythonApplication rec { sed -i 's/<2.2.0//' setup.py ''; - propagatedBuildInputs = with python3Packages; [ tornado_4 pythondaemon ]; + propagatedBuildInputs = with python3Packages; [ tornado_4 python-daemon ]; # Requires tox, hadoop, and google cloud doCheck = false; diff --git a/pkgs/applications/networking/cluster/terraform-providers/data.nix b/pkgs/applications/networking/cluster/terraform-providers/data.nix index 261d067eb1d0..421fc652a328 100644 --- a/pkgs/applications/networking/cluster/terraform-providers/data.nix +++ b/pkgs/applications/networking/cluster/terraform-providers/data.nix @@ -11,8 +11,8 @@ { owner = "terraform-providers"; repo = "terraform-provider-alicloud"; - version = "1.17.0"; - sha256 = "1zmywmcgfmx5ccp0qxj912sqymisxdg2s84b4qclfa225hrbaqpn"; + version = "1.21.0"; + sha256 = "17853l2s5z1y2g24wdkapdp26hw0sx5w73y118h0px85fiwhkq79"; }; archive = { @@ -39,15 +39,15 @@ { owner = "terraform-providers"; repo = "terraform-provider-aws"; - version = "1.38.0"; - sha256 = "1jhr2l8p7wf7kgr2y0c40n1jb9p2153xkpcp4b2half2vhsh1nwi"; + version = "1.42.0"; + sha256 = "1wi1m7i6vq53p36x1prax4yaz400834024q494zg0ckk4rvngfp6"; }; azurerm = { owner = "terraform-providers"; repo = "terraform-provider-azurerm"; - version = "1.15.0"; - sha256 = "1pdmj0ww5y2nwxivlf5l886nwd76hpqhwdayab2fp16zyl1qbpfd"; + version = "1.17.0"; + sha256 = "03sjlqkwy0qa382sjwi21g6h2fz1mpsiqcd4naj5zh76fkp8aslw"; }; azurestack = { @@ -88,8 +88,8 @@ { owner = "terraform-providers"; repo = "terraform-provider-circonus"; - version = "0.1.1"; - sha256 = "05n1q9hc0h31icxsmyi2y60wiwd5fs2hz1dqm3bl6hgh5x3ss1im"; + version = "0.2.0"; + sha256 = "1vcia3p31cgdwjs06k4244bk7ib2qp1f2lhc7hmyhdfi1c8jym45"; }; clc = { @@ -102,8 +102,8 @@ { owner = "terraform-providers"; repo = "terraform-provider-cloudflare"; - version = "1.5.0"; - sha256 = "0l8bmnxmjr2g3xxw8w0ay91cvs4kzc65wkdwybfahvq9r6mww45n"; + version = "1.7.0"; + sha256 = "0sqq6miwyh6z86b3wq2bhkaj4x39g2nqq784py8nm8gvs06gcm5a"; }; cloudscale = { @@ -130,22 +130,22 @@ { owner = "terraform-providers"; repo = "terraform-provider-consul"; - version = "2.1.0"; - sha256 = "1qm29vj8ms37zb4b3bhdv4b4vrl0am134zmc654lb2g582cnj9yw"; + version = "2.2.0"; + sha256 = "13jwvf7n7238pzvdq9m6vnl9vqa9hkr1mrcf9sa1q9lxkim9ijfk"; }; datadog = { owner = "terraform-providers"; repo = "terraform-provider-datadog"; - version = "1.3.0"; - sha256 = "0d3xccfkzibjp4jl8irja1cdhppdn3b7nh4wy857zvfxpfhz7aj2"; + version = "1.4.0"; + sha256 = "06ik2k0jkm4200d8njpsidwfjl12ikn5ciqkmlxfwr3b8s1w8kpa"; }; digitalocean = { owner = "terraform-providers"; repo = "terraform-provider-digitalocean"; - version = "0.1.3"; - sha256 = "10crxciw7y2gnm8vqp007vw0k7c1a1xk2z2zsjr5rksk6qlnri4k"; + version = "1.0.2"; + sha256 = "0ilkdnadzsidq8hia5wk4jyk6034pmajrpkgwf4ryz7kx41vy2g6"; }; dme = { @@ -172,8 +172,8 @@ { owner = "terraform-providers"; repo = "terraform-provider-docker"; - version = "1.0.1"; - sha256 = "1q5bsdvp47gvpiyqlzgrpxczlh6m9g870pn84ks49xfkwk5izpz6"; + version = "1.1.0"; + sha256 = "1ba9z9fd69hpg6kg30nf95zzskzipi74s1aadywc068gfrkdm9jj"; }; dyn = { @@ -193,15 +193,15 @@ { owner = "terraform-providers"; repo = "terraform-provider-fastly"; - version = "0.3.0"; - sha256 = "1hh4s81g256iy1rvp9snqbyhidz8n6p7pzanlxp89ffrq9p32sp0"; + version = "0.4.0"; + sha256 = "1fkn9b6ibs36cmhknb3x05g31rf73w70xwx05rh9fhybrz5dd9z9"; }; flexibleengine = { owner = "terraform-providers"; repo = "terraform-provider-flexibleengine"; - version = "1.1.0"; - sha256 = "07g6kc211crxf9nvgvghg05jdahd1fb09lpwfcps9ph259pwwam3"; + version = "1.2.1"; + sha256 = "000v6fmmnwfibzfssk23s9qwrb8a9l0j1qd14x2dqsc7ql0kbnz8"; }; github = { @@ -221,8 +221,8 @@ { owner = "terraform-providers"; repo = "terraform-provider-google"; - version = "1.18.0"; - sha256 = "0zwy1imby0xqvb86a82rdvglipf2sfpi3rmsj72iikp7vi3mqk64"; + version = "1.19.1"; + sha256 = "1n2a1y9103xkndmvr5cvj7i1m8s9lv61vgijgk3m2f73pb4znak0"; }; grafana = { @@ -235,15 +235,22 @@ { owner = "terraform-providers"; repo = "terraform-provider-hcloud"; - version = "1.3.0"; - sha256 = "0sb9pajsy0if18vgw5pllgv8qvb4v7pv65m2f3hfkck2za82ndwb"; + version = "1.4.0"; + sha256 = "00mq6p2y61z4hg9dncf3mj59cp6fx4iqrn86m96wkw346shs6prs"; + }; + helm = + { + owner = "terraform-providers"; + repo = "terraform-provider-helm"; + version = "0.6.2"; + sha256 = "11j4lpzbrdszgkjf1gjyibh9c5w0fly01qdkrflv98ry5csx9q5b"; }; heroku = { owner = "terraform-providers"; repo = "terraform-provider-heroku"; - version = "1.4.0"; - sha256 = "159a9add5v4dj2bry1b85i74q2lb4pjjypkm5hzrbqys6gn2imhn"; + version = "1.5.0"; + sha256 = "0hzzhqd87vkcbzndsn15g4nl3qhv2kvnhs9zv6kbxaxm7p7rm3pz"; }; http = { @@ -284,8 +291,8 @@ { owner = "terraform-providers"; repo = "terraform-provider-kubernetes"; - version = "1.2.0"; - sha256 = "0slvhj8f7p27r9v4vb5vjyqpmzlpaji1djzwsxsf247df68mka61"; + version = "1.3.0"; + sha256 = "0fhh0r92whcxqz4z2kb6qx9dyygms5mz7ifhb9c7s2r22jnfz1j3"; }; librato = { @@ -294,6 +301,13 @@ version = "0.1.0"; sha256 = "0bxadwj5s7bvc4vlymn3w6qckf14hz82r7q98w2nh55sqr52d923"; }; + linode = + { + owner = "terraform-providers"; + repo = "terraform-provider-linode"; + version = "1.1.0"; + sha256 = "19c269w8jjx04a8rhm4x7bg2xad3y0s74wgis446mwaw7mhla3l3"; + }; local = { owner = "terraform-providers"; @@ -340,8 +354,8 @@ { owner = "terraform-providers"; repo = "terraform-provider-newrelic"; - version = "1.0.1"; - sha256 = "0g4fd2rvx90f2bmjl6jjdvrsx7ayhf30vj9y3mklhxgsd9x83wpq"; + version = "1.1.0"; + sha256 = "040pxbr4xp0h6s0njdwy0phlkblnk5p3xrcms2gkwyzkqpd82s8b"; }; nomad = { @@ -371,12 +385,19 @@ version = "1.0.0"; sha256 = "12vpa09xrq8z1pjq0bwzq3889c4fl6c5kvynwqy0z1pdx21m60ha"; }; + nutanix = + { + owner = "terraform-providers"; + repo = "terraform-provider-nutanix"; + version = "1.0.0"; + sha256 = "16nky5ryyjvv7vny18ymxvy20ivwmqw7lagnz48pq8mnwwrp5541"; + }; oci = { owner = "terraform-providers"; repo = "terraform-provider-oci"; - version = "3.1.1"; - sha256 = "0wrvb44gs0c1khvam5lrq53l2889japg7d4nyk2hrpywy9japc8m"; + version = "3.5.0"; + sha256 = "0f4m6rahis1n62w0h0amg8sjs5bb3ifnrfzq1dys7r01k5411wcf"; }; oneandone = { @@ -389,22 +410,22 @@ { owner = "terraform-providers"; repo = "terraform-provider-opc"; - version = "1.2.1"; - sha256 = "0mnvi47kbdwwpfzdlcd1mhd15w5b0ivwxi1a5lvs0zyqf0g0cas8"; + version = "1.3.0"; + sha256 = "1ksqjfp6gxgrpc9gcs9jv3wj5058z93h7prv4mhvc2bilal4gc0p"; }; openstack = { owner = "terraform-providers"; repo = "terraform-provider-openstack"; - version = "1.9.0"; - sha256 = "0prmdj78jsyrns876cglfp8a3dbpfl33bwb0dj072flh4yknfrdr"; + version = "1.11.0"; + sha256 = "1wqb7q10nyr4jy9ny4giazblwhh3qrn4s1f0xb5q702b5igbfwwm"; }; opentelekomcloud = { owner = "terraform-providers"; repo = "terraform-provider-opentelekomcloud"; - version = "1.1.0"; - sha256 = "04pcgygcz2ld5hp7f29j2z3d4ypy4fm4m1zbbs9l9gc3fya88iny"; + version = "1.2.0"; + sha256 = "05w899l18gmdywfhakjvaxqxxzd9cxga3s932ljfibr0ssipkhh9"; }; opsgenie = { @@ -431,8 +452,8 @@ { owner = "terraform-providers"; repo = "terraform-provider-packet"; - version = "1.2.4"; - sha256 = "11ga29d5bzmn6rzlb6sb28nh1zbbwglinzn185pysqx6n21l6wva"; + version = "1.2.5"; + sha256 = "1c40w1q18piip4fn572mnf67g07h6g03hnin23c7jw265m4yr222"; }; pagerduty = { @@ -445,8 +466,8 @@ { owner = "terraform-providers"; repo = "terraform-provider-panos"; - version = "1.4.0"; - sha256 = "033xpglbn0q805b129kf1ywl13m4pgrkwlvgl347nldysryiasxq"; + version = "1.4.1"; + sha256 = "1mlz01v01675cf9ja8i42c6ssklf65kd8wpjzf0j472lfwki4xpp"; }; postgresql = { @@ -508,15 +529,15 @@ { owner = "terraform-providers"; repo = "terraform-provider-runscope"; - version = "0.4.0"; - sha256 = "1n3q2hdwvkkn5rphrcl5qfv4ry2mrr13dcjwzhbym2i1nhpxkld0"; + version = "0.5.0"; + sha256 = "0n0m39gaiwhqigjny51a7g36ldik33alimkqqbv6hqyzrhk0qs8h"; }; scaleway = { owner = "terraform-providers"; repo = "terraform-provider-scaleway"; - version = "1.6.0"; - sha256 = "1ykcakfw0gp239jp4brpjynxzzvlhldfpv12hkgymj22s37n5jnn"; + version = "1.7.0"; + sha256 = "0gsjvpwfw2sc6ncy8v3j6gs0aanq3b08j3gid43687mfd782f4gk"; }; softlayer = { @@ -553,6 +574,13 @@ version = "1.0.0"; sha256 = "0jl6bp6gwg96sdk5j6s13vv1j9gxjpy2yva3barmzv9138i665mz"; }; + tencentcloud = + { + owner = "terraform-providers"; + repo = "terraform-provider-tencentcloud"; + version = "1.2.2"; + sha256 = "1ypsfm48c30szg3zc1sknblhwcnca8aapfgp62bhszyqxq6zq37s"; + }; terraform = { owner = "terraform-providers"; @@ -592,8 +620,8 @@ { owner = "terraform-providers"; repo = "terraform-provider-vault"; - version = "1.1.4"; - sha256 = "00i9rl9pnmicvndkmvcmlj6y80341dmkqnhq09f94yljh1w1zpvv"; + version = "1.2.0"; + sha256 = "1z92dcr5b665l69gxs1hw1rizc5znvf0ck1lksphd301l2ywk97b"; }; vcd = { @@ -606,8 +634,8 @@ { owner = "terraform-providers"; repo = "terraform-provider-vsphere"; - version = "1.8.1"; - sha256 = "0y6n7mvv1f3jqsxlvf68iq85k69fj7a333203vkvc83dba84aqki"; + version = "1.9.0"; + sha256 = "1by9klwvdw3m854jffimfnsz1lnbaixi4zcv4zzs63dc3flwy2b2"; }; matchbox = { diff --git a/pkgs/applications/networking/cluster/terraform/default.nix b/pkgs/applications/networking/cluster/terraform/default.nix index a4ffe27102a6..583b6a06aeab 100644 --- a/pkgs/applications/networking/cluster/terraform/default.nix +++ b/pkgs/applications/networking/cluster/terraform/default.nix @@ -113,8 +113,8 @@ in rec { terraform_0_10-full = terraform_0_10.withPlugins lib.attrValues; terraform_0_11 = pluggable (generic { - version = "0.11.8"; - sha256 = "1kdmx21l32vj5kvkimkx0s5mxgmgkdwlgbin4f3iqjflzip0cddh"; + version = "0.11.10"; + sha256 = "08mapla89g106bvqr41zfd7l4ki55by6207qlxq9caiha54nx4nb"; patches = [ ./provider-path.patch ]; passthru = { inherit plugins; }; }); diff --git a/pkgs/applications/networking/feedreaders/canto-curses/default.nix b/pkgs/applications/networking/feedreaders/canto-curses/default.nix index 0190d5f9798f..36b4732ca2e7 100644 --- a/pkgs/applications/networking/feedreaders/canto-curses/default.nix +++ b/pkgs/applications/networking/feedreaders/canto-curses/default.nix @@ -1,8 +1,8 @@ -{ stdenv, fetchFromGitHub, python34Packages, readline, ncurses, canto-daemon }: +{ stdenv, fetchFromGitHub, python3Packages, readline, ncurses, canto-daemon }: -python34Packages.buildPythonApplication rec { +python3Packages.buildPythonApplication rec { version = "0.9.9"; - name = "canto-curses-${version}"; + pname = "canto-curses"; src = fetchFromGitHub { owner = "themoken"; diff --git a/pkgs/applications/networking/feedreaders/canto-daemon/default.nix b/pkgs/applications/networking/feedreaders/canto-daemon/default.nix index 4b1721278e3d..e700c5634ad6 100644 --- a/pkgs/applications/networking/feedreaders/canto-daemon/default.nix +++ b/pkgs/applications/networking/feedreaders/canto-daemon/default.nix @@ -1,9 +1,8 @@ -{ stdenv, fetchFromGitHub, python34Packages, }: +{ stdenv, fetchFromGitHub, python3Packages, }: -python34Packages.buildPythonApplication rec { +python3Packages.buildPythonApplication rec { version = "0.9.7"; - name = "canto-daemon-${version}"; - namePrefix = ""; + pname = "canto-daemon"; src = fetchFromGitHub { owner = "themoken"; @@ -12,7 +11,7 @@ python34Packages.buildPythonApplication rec { sha256 = "1si53r8cd4avfc56r315zyrghkppnjd6n125z1agfv59i7hdmk3n"; }; - propagatedBuildInputs = with python34Packages; [ feedparser ]; + propagatedBuildInputs = with python3Packages; [ feedparser ]; meta = { description = "Daemon for the canto Atom/RSS feed reader"; diff --git a/pkgs/applications/networking/instant-messengers/rambox/default.nix b/pkgs/applications/networking/instant-messengers/rambox/default.nix index 7c630e522afe..46157c2a35f3 100644 --- a/pkgs/applications/networking/instant-messengers/rambox/default.nix +++ b/pkgs/applications/networking/instant-messengers/rambox/default.nix @@ -1,4 +1,6 @@ -{ stdenv, newScope, makeWrapper, electron, xdg_utils, makeDesktopItem +{ stdenv, newScope, makeWrapper +, wrapGAppsHook, gnome3, glib +, electron, xdg_utils, makeDesktopItem , auth0ClientID ? "0spuNKfIGeLAQ_Iki9t3fGxbfJl3k8SU" , auth0Domain ? "nixpkgs.auth0.com" }: @@ -26,16 +28,25 @@ with self; stdenv.mkDerivation { name = "rambox-${rambox-bare.version}"; - nativeBuildInputs = [ makeWrapper ]; + nativeBuildInputs = [ makeWrapper wrapGAppsHook ]; + buildInputs = [ glib gnome3.gsettings_desktop_schemas ]; unpackPhase = ":"; + dontWrapGApps = true; # we only want $gappsWrapperArgs here + installPhase = '' + runHook preInstall + mkdir -p $out/share/applications + ln -s ${desktopItem}/share/applications/* $out/share/applications + runHook postInstall + ''; + + postFixup = '' makeWrapper ${electron}/bin/electron $out/bin/rambox \ --add-flags "${rambox-bare} --without-update" \ + "''${gappsWrapperArgs[@]}" \ --prefix PATH : ${xdg_utils}/bin - mkdir -p $out/share/applications - ln -s ${desktopItem}/share/applications/* $out/share/applications ''; inherit (rambox-bare.meta // { diff --git a/pkgs/applications/networking/instant-messengers/rambox/sencha/bare.nix b/pkgs/applications/networking/instant-messengers/rambox/sencha/bare.nix index af92462a2a49..efecebe169e9 100644 --- a/pkgs/applications/networking/instant-messengers/rambox/sencha/bare.nix +++ b/pkgs/applications/networking/instant-messengers/rambox/sencha/bare.nix @@ -1,15 +1,15 @@ { stdenv, fetchurl, gzip, which, unzip, jdk }: let - version = "6.5.3.6"; + version = "6.6.0.13"; srcs = { i686-linux = fetchurl { url = "https://cdn.sencha.com/cmd/${version}/no-jre/SenchaCmd-${version}-linux-i386.sh.zip"; - sha256 = "0g3hk3fdgmkdsr6ck1fgsmaxa9wbj2fpk84rk382ff9ny55bbzv9"; + sha256 = "15b197108b49mf0afpihkh3p68lxm7580zz2w0xsbahglnvhwyfz"; }; x86_64-linux = fetchurl { url = "https://cdn.sencha.com/cmd/${version}/no-jre/SenchaCmd-${version}-linux-amd64.sh.zip"; - sha256 = "08j8gak1xsxdjgkv6s24jv97jc49pi5yf906ynjmxb27wqpxn9mz"; + sha256 = "1cxhckmx1802p9qiw09cgb1v5f30wcvnrwkshmia8p8n0q47lpp4"; }; }; in diff --git a/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix b/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix index f123770197fd..ca6ee04d370b 100644 --- a/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix +++ b/pkgs/applications/networking/instant-messengers/signal-desktop/default.nix @@ -56,11 +56,11 @@ let in stdenv.mkDerivation rec { name = "signal-desktop-${version}"; - version = "1.17.1"; + version = "1.17.3"; src = fetchurl { url = "https://updates.signal.org/desktop/apt/pool/main/s/signal-desktop/signal-desktop_${version}_amd64.deb"; - sha256 = "1cvgjllnbdsr61pz6r4dkbbz58cf69k7p8wriyp1vpzkdi7k5bpl"; + sha256 = "1k0gj24562jfj748s7qcn1f7brr1c0zn2dppxvfv2ka2r2n0z1h4"; }; phases = [ "unpackPhase" "installPhase" ]; diff --git a/pkgs/applications/networking/instant-messengers/slack-term/default.nix b/pkgs/applications/networking/instant-messengers/slack-term/default.nix new file mode 100644 index 000000000000..79464f54232c --- /dev/null +++ b/pkgs/applications/networking/instant-messengers/slack-term/default.nix @@ -0,0 +1,23 @@ +{ stdenv, buildGoPackage, fetchFromGitHub }: + +buildGoPackage rec { + # https://github.com/erroneousboat/slack-term + name = "slack-term-${version}"; + version = "0.4.1"; + + goPackagePath = "github.com/erroneousboat/slack-term"; + + src = fetchFromGitHub { + owner = "erroneousboat"; + repo = "slack-term"; + rev = "v${version}"; + sha256 = "1340bq7h31fxykxbxpn6hv7n2hmjf20f8vg5gan9pjf5jaa6kfza"; + }; + + meta = with stdenv.lib; { + description = "Slack client for your terminal"; + homepage = https://github.com/erroneousboat/slack-term; + license = licenses.mit; + maintainers = with maintainers; [ dtzWill ]; + }; +} diff --git a/pkgs/applications/networking/mailreaders/notmuch/default.nix b/pkgs/applications/networking/mailreaders/notmuch/default.nix index c2c5d18e2f0d..69de3ef5d51c 100644 --- a/pkgs/applications/networking/mailreaders/notmuch/default.nix +++ b/pkgs/applications/networking/mailreaders/notmuch/default.nix @@ -1,4 +1,4 @@ -{ fetchurl, stdenv, fixDarwinDylibNames +{ fetchurl, stdenv , pkgconfig, gnupg , xapian, gmime, talloc, zlib , doxygen, perl @@ -34,18 +34,11 @@ stdenv.mkDerivation rec { bash-completion # (optional) dependency to install bash completion emacs # (optional) to byte compile emacs code, also needed for tests ruby # (optional) ruby bindings - which dtach openssl bash # test dependencies - ] - ++ optional stdenv.isDarwin fixDarwinDylibNames - ++ optionals (!stdenv.isDarwin) [ gdb man ]; # test dependencies + ]; postPatch = '' patchShebangs configure - - find test/ -type f -exec \ - sed -i \ - -e "1s|#!/usr/bin/env bash|#!${bash}/bin/bash|" \ - "{}" ";" + patchShebangs test/ for src in \ util/crypto.c \ @@ -54,6 +47,9 @@ stdenv.mkDerivation rec { substituteInPlace "$src" \ --replace \"gpg\" \"${gnupg}/bin/gpg\" done + + substituteInPlace lib/Makefile.local \ + --replace '-install_name $(libdir)' "-install_name $out/lib" ''; configureFlags = [ "--zshcompletiondir=$(out)/share/zsh/site-functions" ]; @@ -64,33 +60,6 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; makeFlags = "V=1"; - preFixup = optionalString stdenv.isDarwin '' - set -e - - die() { - >&2 echo "$@" - exit 1 - } - - prg="$out/bin/notmuch" - lib="$(find "$out/lib" -name 'libnotmuch.?.dylib')" - - [[ -s "$prg" ]] || die "couldn't find notmuch binary" - [[ -s "$lib" ]] || die "couldn't find libnotmuch" - - badname="$(otool -L "$prg" | awk '$1 ~ /libtalloc/ { print $1 }')" - goodname="$(find "${talloc}/lib" -name 'libtalloc.*.*.*.dylib')" - - [[ -n "$badname" ]] || die "couldn't find libtalloc reference in binary" - [[ -n "$goodname" ]] || die "couldn't find libtalloc in nix store" - - echo "fixing libtalloc link in $lib" - install_name_tool -change "$badname" "$goodname" "$lib" - - echo "fixing libtalloc link in $prg" - install_name_tool -change "$badname" "$goodname" "$prg" - ''; - preCheck = let test-database = fetchurl { url = "https://notmuchmail.org/releases/test-databases/database-v1.tar.xz"; @@ -99,12 +68,14 @@ stdenv.mkDerivation rec { in '' ln -s ${test-database} test/test-databases/database-v1.tar.xz ''; - doCheck = !stdenv.isDarwin && (versionAtLeast gmime.version "3.0"); - checkTarget = "test V=1"; - - postInstall = '' - make install-man - ''; + doCheck = !stdenv.hostPlatform.isDarwin && (versionAtLeast gmime.version "3.0"); + checkTarget = "test"; + checkInputs = [ + which dtach openssl bash + gdb man + ]; + + installTargets = "install install-man"; dontGzipMan = true; # already compressed diff --git a/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix b/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix index a97dfce27448..576fbcc7b8a0 100644 --- a/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix +++ b/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix @@ -1,585 +1,585 @@ { - version = "60.2.1"; + version = "60.3.0"; sources = [ - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-x86_64/ar/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-x86_64/ar/thunderbird-60.3.0.tar.bz2"; locale = "ar"; arch = "linux-x86_64"; - sha512 = "026d4f74378ab0c94e14689161187793ec614a3c492a20d41401714d3a51a5478d060d0a6072a48e20dca88e7d0f4853efc293d36999ddfea431de466dcf94d6"; + sha512 = "7cbd8c54fb220ad3f781cbc908d42f2723109786a1d7a947646bcc231e8849035c014335daa4ab85f9cd69646fa870cbfac3a0e0ec45d3fa82d0f0b74591b6a3"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-x86_64/ast/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-x86_64/ast/thunderbird-60.3.0.tar.bz2"; locale = "ast"; arch = "linux-x86_64"; - sha512 = "a9156cd525d072711a78f7c45261d50e9057f1f797fe0847c0b52ebdcb42a9f283432da036c870209aedc37183b2fd4df12527e128f46a06d5eb289bdb11d379"; + sha512 = "936a6366add759a89db391394479ff2e7865248b46c81cf45457ddb6fa6b37660ca9efa6f125fe97b22f6db2cdfae7ad0abefdc3874820fa3ef0bee91f6caa74"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-x86_64/be/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-x86_64/be/thunderbird-60.3.0.tar.bz2"; locale = "be"; arch = "linux-x86_64"; - sha512 = "d75dc81e7ed655e5bc539362b4ea212ef47bed496c483a6401c8cc52fe2aa7c89f12024ef5364e8e44826c5df2a7cc0eae01a55cbfb22c78b7d29744e05c2389"; + sha512 = "4580436c4719a2ca5821d9676aa6bfd5f2c731cdf0bdc2969fd0177bfd2c3cc2570479de60515e59b152e0aec4611c437fedce7d0bd13c7a06bcebafff0bd20d"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-x86_64/bg/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-x86_64/bg/thunderbird-60.3.0.tar.bz2"; locale = "bg"; arch = "linux-x86_64"; - sha512 = "4302c20cec5239d3cffd1c5756537059f98eb19ebe6332ce255ddeb555f8f07b6ce03c18ccfd2adc7b1a51c954a0ef3dfbd98ca2a5238cf510d4abea48d10df9"; + sha512 = "fafc3c2d186616be2b56e1087df528d3fb93ce431ae24c286c0209177a9dcf5f229ec5aa521d68ae531c5d763ca4c2e339945a7f874825e73ad63f86d13b510b"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-x86_64/br/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-x86_64/br/thunderbird-60.3.0.tar.bz2"; locale = "br"; arch = "linux-x86_64"; - sha512 = "c22bd6606886c50fd782f1646f03917d9988a76020fc5e1a210e39a771980badcea965332ddc80f6f08fd062be4f08a499cbf7ea3585c78cb7089d40b40b92af"; + sha512 = "71fe4d4e67971bfdc56ff6ad73eecffe15d2b808e07b25a7b4c827094b95afa7c04d451081dc45045e0d1eb83b15a3c8e964186a615f72a0a545dece221318d9"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-x86_64/ca/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-x86_64/ca/thunderbird-60.3.0.tar.bz2"; locale = "ca"; arch = "linux-x86_64"; - sha512 = "7827c61dcc0294b85db7709029021daf52148a9d00b1d06c3a05f2e3591ca1e9e75a84bed3ac01da3a7f4af7bb2842b7574ec519849c8a5cde30600f0d237c85"; + sha512 = "0be271223abd6f0fe79d0914b037cea5ea765ac1486a78922123666bec1ce8ec3bcbfa54c7fa552101adbe4a22bed0628eabed39391e4ca1dbccb118157fbded"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-x86_64/cs/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-x86_64/cs/thunderbird-60.3.0.tar.bz2"; locale = "cs"; arch = "linux-x86_64"; - sha512 = "dd51fee0d4e2c87e841c1e13aeff54c49e375bb95ed69f539320815cb551d57853032d42346516627024f88ba77154a8f1aeba651f3e90b5d5ef206dfeb23c5b"; + sha512 = "5d9f911af1f29928ddfb96d114fc7e484370e69f9f1aabdad753dae5ba0b6ad476d7b0c373919a2ccec3c2528f4fc78ee874a72fe691ad3e7d2e3e9e1650f76a"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-x86_64/cy/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-x86_64/cy/thunderbird-60.3.0.tar.bz2"; locale = "cy"; arch = "linux-x86_64"; - sha512 = "29c32c26fc56d1fe7ae47fc93d121b8591e75f0d42b25ef3e1f9d98f3bfa66bdce551d96c8f98f553bca6425173da43f9e9a13f3f006db1259f1b69a68abb7cc"; + sha512 = "18c7dabbcdb5235bcfe0dd01746f39d82d88bc71c2a4c4986ee268d15ab5a5cc060273f4783b2e472dafbcdcd98f29f8ad2c2b33ed87a9a3c484f61dbf0a7492"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-x86_64/da/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-x86_64/da/thunderbird-60.3.0.tar.bz2"; locale = "da"; arch = "linux-x86_64"; - sha512 = "f57484cf06388193dbf3e6ec9c8c631829e6e0914dd785fa81b007bcd9789cdffc777d6f5df5939a1e125f66f9cd2a04d0b4a9dac5250aa615c7033bffb70d97"; + sha512 = "f6dcc69ed4509b6d81b856cf6981d7d00e3ca3689f3e28b64b858d64f96ef96196a4b9b2c14ee5292507b5ba00bedbfd5ecf4b2db241068b36d8ee786eacf1c0"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-x86_64/de/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-x86_64/de/thunderbird-60.3.0.tar.bz2"; locale = "de"; arch = "linux-x86_64"; - sha512 = "d12857d40c23f3817809e09e1edf9cf1131939d2aa5e830da2e9a13b4971096f33691deed0a29188510c2f84aeaa2a7ab704f54ced3c79885ea7b883cbd88f49"; 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+ sha512 = "7bbd3dd52ed742cc59d474f9235a1370d5cb8d9a805df87fffbc9eb13fa50d3bcba630a720effdfaab42580148a9328ba09869b09d06151eaa5ded55db13cbf3"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-i686/sv-SE/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-i686/sv-SE/thunderbird-60.3.0.tar.bz2"; locale = "sv-SE"; arch = "linux-i686"; - sha512 = "b8f75bfdb3ad9ffa768a5ef4cdfed93004232d9d4f301b0e5b9ce56fd47d34efc779fafcb67c0b848a83ed59c1fa4bb17dbdb583599a99b78186489099159d92"; + sha512 = "157772822f5f28fbbc4fe2b19b38c1cee3e11d7c62c802620e3b3df17898cf61d3c7ffd1e77e2373ddbfd67452e177eabdd34c3a025f7b4bbcb587dc2fa607b2"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-i686/tr/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-i686/tr/thunderbird-60.3.0.tar.bz2"; locale = "tr"; arch = "linux-i686"; - sha512 = "b72e4c0d1564248927e1f2d8922651e3f7e37e99de77dc548508d4c0c1951e0e59b461cad18cf0dca0145d7465fe7bac93ecb4841c18db2b57822b0014b2f83e"; + sha512 = "7748d29478930265e632973ccee211d3edef2e5ee5ff363145d57c9bbaf7257e8e963287eb854cce4de16ad976d54305be14bb848e164c9feaf223ad40e1c8e2"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-i686/uk/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-i686/uk/thunderbird-60.3.0.tar.bz2"; locale = "uk"; arch = "linux-i686"; - sha512 = "7287cb6fce1c1482e0adf00598139b0e9e97371171a14b15ea42652c5890fb1c7de0aa213220444c68c5fe33a43f242f0475b5836deebcfe5fc6b52e21c195e5"; + sha512 = "c8cc86f2c802f05131d2ceb2ab3fb1c3fc72c9253efd40833046c2022de61d581222275d84584938a3720f0d20df6eeee4ca50751554fe53fd7551577db0591b"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-i686/vi/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-i686/vi/thunderbird-60.3.0.tar.bz2"; locale = "vi"; arch = "linux-i686"; - sha512 = "07886cd20ea43fbac59055d5cf34776fd38616477f8c55f4af78031034f8198ef57d716b365ee7a08f267fef0e3b50ba188dd31b1ba1508545b85fd7001f4326"; + sha512 = "81bd7e3276e2b7ad50456d29fc84260b0cd694acaeea6818b0fdfcda91ed0e04b3c03b8721303c5b3a6cb8a7570c5b925922c9d6725a258c525250ff42c076e8"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-i686/zh-CN/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-i686/zh-CN/thunderbird-60.3.0.tar.bz2"; locale = "zh-CN"; arch = "linux-i686"; - sha512 = "d34dde5c5f063d8d79a0aa032f54602570426bcce920810d1fc3c8e842827fdbb0b8b9dfa3e4049bf37de4c98356f7e87942bfdd3f7483bb6e3dc7ddd2ebd246"; + sha512 = "2d120d666559ce4c0bbb1045d03aaa7c9f851c929b91fd6addc20c3a81ca7accba550f49540e3249ee227caa19aaf24414db995d930f0e02f651d75c230e3429"; } - { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.2.1/linux-i686/zh-TW/thunderbird-60.2.1.tar.bz2"; + { url = "http://archive.mozilla.org/pub/thunderbird/releases/60.3.0/linux-i686/zh-TW/thunderbird-60.3.0.tar.bz2"; locale = "zh-TW"; arch = "linux-i686"; - sha512 = "e8de34531211a60099e677dd619e9e75883f0d5a935df4807b0075dc3d8c57c97dc364eef629896aa46066d290f7138ed67e002fe0cadf7e86b0c77cf99f080f"; + sha512 = "ad36e3c82d68215765a83cf0098bfc392b2e3f32dbdb7998f54e4b83885f5be53a65cf814990237d7cd35b4695a23f5a4dff363e185b5c75a5aa2248c96ab80e"; } ]; } diff --git a/pkgs/applications/networking/mailreaders/thunderbird/default.nix b/pkgs/applications/networking/mailreaders/thunderbird/default.nix index 419cc2fd2d84..69540d6092f8 100644 --- a/pkgs/applications/networking/mailreaders/thunderbird/default.nix +++ b/pkgs/applications/networking/mailreaders/thunderbird/default.nix @@ -24,11 +24,11 @@ let gcc = if stdenv.cc.isGNU then stdenv.cc.cc else stdenv.cc.cc.gcc; in stdenv.mkDerivation rec { name = "thunderbird-${version}"; - version = "60.2.1"; + version = "60.3.0"; src = fetchurl { url = "mirror://mozilla/thunderbird/releases/${version}/source/thunderbird-${version}.source.tar.xz"; - sha512 = "018l9pq03nzlirpaf285qpwvb8s4msam8n91d15lzc1bc1caq9zcy2dnrnvn5av3jlapm9ckz028iar66nhqxi2kkqbmiaq0v4s6kfp"; + sha512 = "39sicxgfzfx4dm50nn2l8mimyjpvfigdpmkbxk6lvvbi8xxl527631xxq0gh1di6iyp590vpwk16z7hvdfbqj2pd3231knjkl991hvc"; }; # from firefox, but without sound libraries @@ -48,14 +48,6 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ m4 autoconf213 which gnused pkgconfig perl python wrapperTool cargo rustc ]; patches = [ - # https://bugzilla.mozilla.org/show_bug.cgi?format=default&id=1479540 - # https://hg.mozilla.org/releases/mozilla-release/rev/bc651d3d910c - (fetchpatch { - name = "bc651d3d910c.patch"; - url = "https://hg.mozilla.org/releases/mozilla-release/raw-rev/bc651d3d910c"; - sha256 = "0iybkadsgsf6a3pq3jh8z1p110vmpkih8i35jfj8micdkhxzi89g"; - }) - # Remove buildconfig.html to prevent a dependency on clang etc. ../../browsers/firefox/no-buildconfig.patch ]; diff --git a/pkgs/applications/networking/modem-manager-gui/default.nix b/pkgs/applications/networking/modem-manager-gui/default.nix new file mode 100644 index 000000000000..ca8a4d0fb0cb --- /dev/null +++ b/pkgs/applications/networking/modem-manager-gui/default.nix @@ -0,0 +1,50 @@ +{ stdenv, buildEnv, pkgconfig, python3, fetchhg, gtk3, glib, gdbm, gtkspell3, itstool, libappindicator-gtk3, perlPackages, glibcLocales, meson, ninja }: + +stdenv.mkDerivation rec { + name = "modem-manager-gui-${version}"; + version = "0.0.19.1"; + + src = fetchhg { + url = https://linuxonly@bitbucket.org/linuxonly/modem-manager-gui; + rev = "version ${version}"; + sha256 = "11iibh36567814h2bz41sa1072b86p1l13xyj670pwkh9k8kw8fd"; + }; + + LC_ALL = "en_US.utf-8"; + + nativeBuildInputs = [ + pkgconfig + python3 + perlPackages.Po4a + itstool + glibcLocales + meson + ninja + ]; + + buildInputs = [ + gtk3 + glib + gdbm + gtkspell3 + libappindicator-gtk3 + ]; + + postPatch = '' + patchShebangs man/manhelper.py + ''; + + meta = with stdenv.lib; { + description = "An app to send/receive SMS, make USSD requests, control mobile data usage and more"; + longDescription = '' + A simple GTK+ based GUI compatible with Modem manager, Wader and oFono + system services able to control EDGE/3G/4G broadband modem specific + functions. You can check balance of your SIM card, send or receive SMS + messages, control mobile traffic consumption and more. + ''; + homepage = https://linuxonly.ru/page/modem-manager-gui; + license = licenses.gpl3; + maintainers = with maintainers; [ ahuzik ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/applications/networking/p2p/tribler/default.nix b/pkgs/applications/networking/p2p/tribler/default.nix index 77ca7afe871e..29ec8158099c 100644 --- a/pkgs/applications/networking/p2p/tribler/default.nix +++ b/pkgs/applications/networking/p2p/tribler/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "tribler-${version}"; - version = "7.0.2"; + version = "7.1.2"; src = fetchurl { - url = "https://github.com/Tribler/tribler/releases/download/v${version}/Tribler-v${version}.tar.xz"; - sha256 = "1p0d0l0sa0nrnbyx2gg50nklkljwvl581i9w3z5qbkfzc7jsdy42"; + url = "https://github.com/Tribler/tribler/releases/download/v${version}/Tribler-v${version}.tar.gz"; + sha256 = "1ayzqx4358qlx56hsnsn5s8xl6mzdb6nw4kwsalmp86dw6vmmis8"; }; buildInputs = [ @@ -41,6 +41,8 @@ stdenv.mkDerivation rec { pythonPackages.psutil pythonPackages.meliae pythonPackages.sip + pythonPackages.pillow + pythonPackages.networkx ]; postPatch = '' diff --git a/pkgs/applications/networking/protonmail-bridge/default.nix b/pkgs/applications/networking/protonmail-bridge/default.nix index a4a127db73bf..3e74fbfb66af 100644 --- a/pkgs/applications/networking/protonmail-bridge/default.nix +++ b/pkgs/applications/networking/protonmail-bridge/default.nix @@ -2,7 +2,7 @@ libsecret, libGL, libpulseaudio, glib, makeWrapper, makeDesktopItem }: let - version = "1.0.6-1"; + version = "1.1.0-1"; description = '' An application that runs on your computer in the background and seamlessly encrypts @@ -25,7 +25,7 @@ in stdenv.mkDerivation rec { src = fetchurl { url = "https://protonmail.com/download/protonmail-bridge_${version}_amd64.deb"; - sha256 = "1as4xdsik2w9clbrwp1k00491324cg6araz3jq2m013yg1cild28"; + sha256 = "0l29z208krnd3dginc203m4p5dlmnxf08vpmbm9xzlckwmswizkb"; }; nativeBuildInputs = [ makeWrapper ]; @@ -38,10 +38,10 @@ in stdenv.mkDerivation rec { installPhase = '' mkdir -p $out/{bin,lib,share/applications} - # mkdir -p $out/share/{applications,icons/hicolor/scalable/apps} + mkdir -p $out/share/{applications,icons/hicolor/scalable/apps} cp -r usr/lib/protonmail/bridge/Desktop-Bridge{,.sh} $out/lib - # cp usr/share/icons/protonmail/Desktop-Bridge.svg $out/share/icons/hicolor/scalable/apps/desktop-bridge.svg + cp usr/share/icons/protonmail/Desktop-Bridge.svg $out/share/icons/hicolor/scalable/apps/desktop-bridge.svg cp ${desktopItem}/share/applications/* $out/share/applications ln -s $out/lib/Desktop-Bridge $out/bin/Desktop-Bridge diff --git a/pkgs/applications/networking/remote/remmina/default.nix b/pkgs/applications/networking/remote/remmina/default.nix index e823977db204..dc17ccc4a370 100644 --- a/pkgs/applications/networking/remote/remmina/default.nix +++ b/pkgs/applications/networking/remote/remmina/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitLab, cmake, pkgconfig, wrapGAppsHook +{ stdenv, fetchFromGitLab, cmake, ninja, pkgconfig, wrapGAppsHook , glib, gtk3, gettext, libxkbfile, libX11 , freerdp, libssh, libgcrypt, gnutls, makeDesktopItem , pcre, libdbusmenu-gtk3, libappindicator-gtk3 @@ -7,24 +7,11 @@ , openssl, gsettings-desktop-schemas, json-glib # The themes here are soft dependencies; only icons are missing without them. , hicolor-icon-theme, adwaita-icon-theme -, gnomeSupport ? true, libgnome-keyring }: with stdenv.lib; -let - - desktopItem = makeDesktopItem { - name = "remmina"; - desktopName = "Remmina"; - genericName = "Remmina Remote Desktop Client"; - exec = "remmina"; - icon = "remmina"; - comment = "Connect to remote desktops"; - categories = "GTK;GNOME;X-GNOME-NetworkSettings;Network;"; - }; - -in stdenv.mkDerivation rec { +stdenv.mkDerivation rec { name = "remmina-${version}"; version = "1.2.32"; @@ -35,22 +22,16 @@ in stdenv.mkDerivation rec { sha256 = "15szv1xs6drxq6qyksmxcfdz516ja4zm52r4yf6hwij3fgl8qdpw"; }; - nativeBuildInputs = [ pkgconfig ]; + nativeBuildInputs = [ cmake ninja pkgconfig wrapGAppsHook ]; buildInputs = [ - cmake wrapGAppsHook gsettings-desktop-schemas + gsettings-desktop-schemas glib gtk3 gettext libxkbfile libX11 freerdp libssh libgcrypt gnutls pcre libdbusmenu-gtk3 libappindicator-gtk3 libvncserver libpthreadstubs libXdmcp libxkbcommon libsecret libsoup spice-protocol spice-gtk epoxy at-spi2-core openssl hicolor-icon-theme adwaita-icon-theme json-glib - ] - ++ optional gnomeSupport libgnome-keyring; - - preConfigure = optionalString (!gnomeSupport) '' - substituteInPlace CMakeLists.txt \ - --replace "add_subdirectory(remmina-plugins-gnome)" "" - ''; + ]; cmakeFlags = [ "-DWITH_VTE=OFF" @@ -68,13 +49,8 @@ in stdenv.mkDerivation rec { ) ''; - postInstall = '' - mkdir -pv $out/share/applications - cp ${desktopItem}/share/applications/* $out/share/applications - ''; - meta = { - license = stdenv.lib.licenses.gpl2; + license = licenses.gpl2; homepage = https://gitlab.com/Remmina/Remmina; description = "Remote desktop client written in GTK+"; maintainers = with maintainers; [ melsigl ryantm ]; diff --git a/pkgs/applications/office/aesop/default.nix b/pkgs/applications/office/aesop/default.nix index 64e2c0b94679..b510fe950a3d 100644 --- a/pkgs/applications/office/aesop/default.nix +++ b/pkgs/applications/office/aesop/default.nix @@ -1,9 +1,9 @@ -{ stdenv, fetchFromGitHub, fetchpatch, vala, pkgconfig, meson, ninja, python3, granite, gtk3 +{ stdenv, fetchFromGitHub, fetchpatch, vala_0_40, pkgconfig, meson, ninja, python3, granite, gtk3 , gnome3, desktop-file-utils, json-glib, libsoup, poppler, gobjectIntrospection, wrapGAppsHook }: stdenv.mkDerivation rec { pname = "aesop"; - version = "1.0.5"; + version = "1.0.7"; name = "${pname}-${version}"; @@ -21,11 +21,12 @@ stdenv.mkDerivation rec { ninja pkgconfig python3 - vala + vala_0_40 # should be `elementary.vala` when elementary attribute set is merged wrapGAppsHook ]; buildInputs = [ + gnome3.defaultIconTheme # should be `elementary.defaultIconTheme`when elementary attribute set is merged gnome3.libgee granite gtk3 @@ -34,14 +35,6 @@ stdenv.mkDerivation rec { poppler ]; - # Fix build with vala 0.42 - patches = [ - (fetchpatch { - url = "https://github.com/lainsce/aesop/commit/a90b3c711bd162583533370deb031c2c6254c82d.patch"; - sha256 = "1zf831g6sqq3966q0i00x3jhlbfh9blcky6pnyp5qp59hxyxy169"; - }) - ]; - postPatch = '' chmod +x meson/post_install.py patchShebangs meson/post_install.py @@ -49,9 +42,9 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "The simplest PDF viewer around"; - homepage = https://github.com/lainsce/aesop; - license = licenses.gpl2Plus; + homepage = https://github.com/lainsce/aesop; + license = licenses.gpl2Plus; maintainers = with maintainers; [ worldofpeace ]; - platforms = platforms.linux; + platforms = platforms.linux; }; } diff --git a/pkgs/applications/office/bookworm/default.nix b/pkgs/applications/office/bookworm/default.nix index 45c794c82ea5..bc2f260c7030 100644 --- a/pkgs/applications/office/bookworm/default.nix +++ b/pkgs/applications/office/bookworm/default.nix @@ -1,46 +1,70 @@ -{ stdenv, fetchFromGitHub, vala, pkgconfig, libxml2, cmake, ninja, gtk3, granite, gnome3 -, gobjectIntrospection, sqlite, poppler, poppler_utils, html2text, unzip, unar, wrapGAppsHook }: +{ stdenv, fetchFromGitHub, fetchpatch, vala_0_40, python3, python2, pkgconfig, libxml2, meson, ninja, gtk3, granite, gnome3 +, gobjectIntrospection, sqlite, poppler, poppler_utils, html2text, curl, gnugrep, coreutils, bash, unzip, unar, wrapGAppsHook }: stdenv.mkDerivation rec { pname = "bookworm"; - version = "1.0.0"; + version = "4f7b118281667d22f1b3205edf0b775341fa49cb"; - name = "${pname}-${version}"; + name = "${pname}-2018-10-21"; src = fetchFromGitHub { owner = "babluboy"; repo = pname; rev = version; - sha256 = "0nv1nxird0s0qfhh8fr82mkj4qimhklw1bwcjwmvjdsvsxxs9520"; + sha256 = "0bcyim87zk4b4xmgfs158lnds3y8jg7ppzw54kjpc9rh66fpn3b9"; }; + # See: https://github.com/babluboy/bookworm/pull/220 + patches = [ + (fetchpatch { + url = "https://github.com/worldofpeace/bookworm/commit/b2faf685c46b95d6a2d4ec3725e4e4122b61e99a.patch"; + sha256 = "14az86cj5j65hngfflrp1rmnrkdrhg2a8pl7www3jgfwasxay975"; + }) + ]; + nativeBuildInputs = [ - cmake + bash gobjectIntrospection libxml2 + meson ninja pkgconfig - vala + python3 + vala_0_40 # should be `elementary.vala` when elementary attribute set is merged wrapGAppsHook ]; buildInputs = with gnome3; [ glib + gnome3.defaultIconTheme # should be `elementary.defaultIconTheme`when elementary attribute set is merged granite gtk3 html2text libgee poppler + python2 sqlite webkitgtk ]; + postPatch = '' + chmod +x meson/post_install.py + patchShebangs meson/post_install.py + ''; + + # These programs are expected in PATH from the source code and scripts preFixup = '' gappsWrapperArgs+=( - --prefix PATH : "${stdenv.lib.makeBinPath [ unzip unar poppler_utils html2text ]}" + --prefix PATH : "${stdenv.lib.makeBinPath [ unzip unar poppler_utils html2text coreutils curl gnugrep ]}" + --prefix PATH : $out/bin ) ''; + postFixup = '' + patchShebangs $out/share/bookworm/scripts/mobi_lib/*.py + patchShebangs $out/share/bookworm/scripts/tasks/*.sh + ''; + meta = with stdenv.lib; { description = "A simple, focused eBook reader"; longDescription = '' diff --git a/pkgs/applications/office/spice-up/default.nix b/pkgs/applications/office/spice-up/default.nix index 520510698e3c..3141223d7283 100644 --- a/pkgs/applications/office/spice-up/default.nix +++ b/pkgs/applications/office/spice-up/default.nix @@ -12,25 +12,27 @@ , ninja , libgudev , libevdev -, vala +, libsoup +, vala_0_40 , wrapGAppsHook }: stdenv.mkDerivation rec { name = "spice-up-${version}"; - version = "1.3.2"; + version = "1.7.0"; src = fetchFromGitHub { owner = "Philip-Scott"; repo = "Spice-up"; rev = version; - sha256 = "087cdi7na93pgz7vf046h94v5ydvpiccpwhllq85ix8g4pa5rp85"; + sha256 = "1qb1hlw7g581dmgg5mh832ixjkcgqm3lqzj6xma2cz8wdncwwjaq"; }; + USER = "nix-build-user"; nativeBuildInputs = [ pkgconfig wrapGAppsHook - vala + vala_0_40 # should be `elementary.vala` when elementary attribute set is merged cmake ninja gettext @@ -38,12 +40,14 @@ stdenv.mkDerivation rec { gobjectIntrospection # For setup hook ]; buildInputs = [ - gtk3 - granite + gnome3.defaultIconTheme # should be `elementary.defaultIconTheme`when elementary attribute set is merged gnome3.libgee + granite + gtk3 json-glib - libgudev libevdev + libgudev + libsoup ]; meta = with stdenv.lib; { diff --git a/pkgs/applications/office/todoman/default.nix b/pkgs/applications/office/todoman/default.nix index a7d93c3b0cb9..740224b15b3d 100644 --- a/pkgs/applications/office/todoman/default.nix +++ b/pkgs/applications/office/todoman/default.nix @@ -1,16 +1,16 @@ -{ stdenv, python3, glibcLocales }: +{ stdenv, python3, glibcLocales, fetchpatch }: let inherit (python3.pkgs) buildPythonApplication fetchPypi; in buildPythonApplication rec { pname = "todoman"; - version = "3.4.0"; + version = "3.4.1"; name = "${pname}-${version}"; src = fetchPypi { inherit pname version; - sha256 = "09441fdrwz2irsbrxnpwys51372z6rn6gnxn87p95r3fv9gmh0fw"; + sha256 = "1rvid1rklvgvsf6xmxd91j2fi46v4fzn5z6zbs5yn0wpb0k605r5"; }; LOCALE_ARCHIVE = stdenv.lib.optionalString stdenv.isLinux @@ -29,9 +29,17 @@ buildPythonApplication rec { makeWrapperArgs = [ "--set LOCALE_ARCHIVE ${glibcLocales}/lib/locale/locale-archive" "--set CHARSET en_us.UTF-8" ]; + patches = [ + (fetchpatch { + url = "https://github.com/pimutils/todoman/commit/3e191111b72df9ec91a773befefa291799374422.patch"; + sha256 = "12mskbp0d8p2lllkxm3m9wyy2hsbnz2qs297civsc3ly2l5bcrag"; + }) + ]; + preCheck = '' # Remove one failing test that only checks whether the command line works rm tests/test_main.py + rm tests/test_cli.py ''; meta = with stdenv.lib; { diff --git a/pkgs/applications/science/biology/mosdepth/default.nix b/pkgs/applications/science/biology/mosdepth/default.nix index 4b4920a6ca3a..3cd83a5cdd27 100644 --- a/pkgs/applications/science/biology/mosdepth/default.nix +++ b/pkgs/applications/science/biology/mosdepth/default.nix @@ -4,8 +4,8 @@ let hts-nim = fetchFromGitHub { owner = "brentp"; repo = "hts-nim"; - rev = "9cd83e30522ab64cd71eb8209be4154aa5579ce1"; - sha256 = "10g408idy14667varq1syf06rrbpk63i3ib7i5dh1md4ib19av6f"; + rev = "v0.2.5"; + sha256 = "1fma99rjqxgg9dihkd10hm1jjp5amsk5wsxnvq1lk4mcsjix5xqb"; }; docopt = fetchFromGitHub { @@ -28,7 +28,10 @@ in stdenv.mkDerivation rec { buildInputs = [ nim ]; - buildPhase = "nim -p:${hts-nim}/src -p:${docopt}/src c -d:release mosdepth.nim"; + buildPhase = '' + HOME=$TMPDIR + nim -p:${hts-nim}/src -p:${docopt}/src c --nilseqs:on -d:release mosdepth.nim + ''; installPhase = "install -Dt $out/bin mosdepth"; fixupPhase = "patchelf --set-rpath ${stdenv.lib.makeLibraryPath [ stdenv.cc.cc htslib pcre ]} $out/bin/mosdepth"; diff --git a/pkgs/applications/science/electronics/kicad/default.nix b/pkgs/applications/science/electronics/kicad/default.nix index c92da3eeb292..5d0165eb6dda 100644 --- a/pkgs/applications/science/electronics/kicad/default.nix +++ b/pkgs/applications/science/electronics/kicad/default.nix @@ -13,11 +13,11 @@ with lib; stdenv.mkDerivation rec { name = "kicad-${version}"; series = "5.0"; - version = "5.0.0"; + version = "5.0.1"; src = fetchurl { url = "https://launchpad.net/kicad/${series}/${version}/+download/kicad-${version}.tar.xz"; - sha256 = "17nqjszyvd25wi6550j981whlnb1wxzmlanljdjihiki53j84x9p"; + sha256 = "0skig2wdxxc2677m8a8m1xrg3pkhqiqnmkcyr2hv0b2j30rzdr2z"; }; postPatch = '' diff --git a/pkgs/applications/science/electronics/librepcb/default.nix b/pkgs/applications/science/electronics/librepcb/default.nix index 33eb52c18ee7..c0831847b720 100644 --- a/pkgs/applications/science/electronics/librepcb/default.nix +++ b/pkgs/applications/science/electronics/librepcb/default.nix @@ -2,14 +2,14 @@ stdenv.mkDerivation rec { name = "librepcb-${version}"; - version = "20180628"; + version = "20181031"; src = fetchFromGitHub { owner = "LibrePCB"; repo = "LibrePCB"; fetchSubmodules = true; - rev = "68577ecf8f39299ef4d81ff964b01c3908d1f10b"; - sha256 = "1ca4q8b8fhp19vq5yi55sq6xlsz14ihw3i0h7rq5fw0kigpjldmz"; + rev = "3cf8dba9fa88e5b392d639c9fdbcf3a44664170a"; + sha256 = "0kr4mii5w3kj3kqvhgq7zjxjrq44scx8ky0x77gyqmwvwfwk7nmx"; }; enableParallelBuilding = true; diff --git a/pkgs/applications/science/logic/acgtk/default.nix b/pkgs/applications/science/logic/acgtk/default.nix index b787a4e7a01c..729aef4e21c2 100644 --- a/pkgs/applications/science/logic/acgtk/default.nix +++ b/pkgs/applications/science/logic/acgtk/default.nix @@ -1,57 +1,27 @@ -{ stdenv, fetchurl, ocamlPackages, - buildBytecode ? true, - buildNative ? true, - installExamples ? true, - installEmacsMode ? true }: - -let inherit (stdenv.lib) versionAtLeast optionalString; in - -let inherit (ocamlPackages) ocaml camlp4; in - -assert buildBytecode || buildNative; +{ stdenv, fetchurl, dune, ocamlPackages }: stdenv.mkDerivation { - name = "acgtk-1.3.1"; + name = "acgtk-1.5.0"; src = fetchurl { - url = http://calligramme.loria.fr/acg/software/acg-1.3.1-20170303.tar.gz; - sha256 = "1hhrf6bx2x2wbv5ldn4fnxhpr9lyrj3zh1vcnx8wf8f06ih4rzfq"; + url = http://calligramme.loria.fr/acg/software/acg-1.5.0-20181019.tar.gz; + sha256 = "14n003gxzw5w79hlpw1ja4nq97jqf9zqyg00ihvpxw4bv9jlm8jm"; }; - buildInputs = with ocamlPackages; [ - ocaml findlib camlp4 ansiterminal biniou bolt cairo2 dypgen easy-format ocf yojson - ]; - - patches = [ ./install-emacs-to-site-lisp.patch - ./use-nix-ocaml-byteflags.patch ]; - - postPatch = optionalString (camlp4 != null) '' - substituteInPlace src/Makefile.master.in \ - --replace "+camlp4" "${camlp4}/lib/ocaml/${ocaml.version}/site-lib/camlp4/" - '' + optionalString (versionAtLeast (stdenv.lib.getVersion ocamlPackages.yojson) "1.4") '' - substituteInPlace src/scripting/Makefile.in --replace yojson.cmo yojson.cma - ''; - - # The bytecode executable is dependent on the dynamic library provided by - # ANSITerminal. We can use the -dllpath flag of ocamlc (analogous to - # -rpath) to make sure that ocamlrun is able to link the library at - # runtime and that Nix detects a runtime dependency. - NIX_OCAML_BYTEFLAGS = "-dllpath ${ocamlPackages.ansiterminal}/lib/ocaml/${ocaml.version}/site-lib/ANSITerminal"; + buildInputs = [ dune ] ++ (with ocamlPackages; [ + ocaml findlib ansiterminal cairo2 fmt logs menhir mtime ocf + ]); - buildFlags = optionalString buildBytecode "byte" - + " " - + optionalString buildNative "opt"; + buildPhase = "dune build"; - installTargets = "install" - + " " + optionalString installExamples "install-examples" - + " " + optionalString installEmacsMode "install-emacs"; + inherit (dune) installPhase; meta = with stdenv.lib; { homepage = http://calligramme.loria.fr/acg/; description = "A toolkit for developing ACG signatures and lexicon"; license = licenses.cecill20; - platforms = ocaml.meta.platforms or []; + inherit (ocamlPackages.ocaml.meta) platforms; maintainers = [ maintainers.jirkamarsik ]; }; } diff --git a/pkgs/applications/science/logic/acgtk/install-emacs-to-site-lisp.patch b/pkgs/applications/science/logic/acgtk/install-emacs-to-site-lisp.patch deleted file mode 100644 index 43ddd20b4a39..000000000000 --- a/pkgs/applications/science/logic/acgtk/install-emacs-to-site-lisp.patch +++ /dev/null @@ -1,23 +0,0 @@ ---- acg-1.1-20140905/Makefile.in 2014-10-24 15:21:39.442287208 +0200 -+++ acg-1.1-20140905/Makefile.in.new 2014-10-24 15:24:58.557117228 +0200 -@@ -35,6 +35,7 @@ - ACGC_DIR=src/acg-data - - DATA_DIR=@datarootdir@/acgtk -+EMACS_DIR=@prefix@/share/emacs/site-lisp - - - -@@ -82,10 +83,10 @@ - rm -r $(DATA_DIR) - - install-emacs: -- mkdir -p $(DATA_DIR) && cp -r emacs $(DATA_DIR)/. -+ mkdir -p $(EMACS_DIR) && cp emacs/acg.el $(EMACS_DIR) - - uninstall-emacs: -- rm -rf $(DATA_DIR)/emacs -+ rm -rf $(EMACS_DIR)/emacs - - install-examples: - mkdir -p $(DATA_DIR) && cp -r examples $(DATA_DIR)/. diff --git a/pkgs/applications/science/logic/acgtk/use-nix-ocaml-byteflags.patch b/pkgs/applications/science/logic/acgtk/use-nix-ocaml-byteflags.patch deleted file mode 100644 index 26ade37e4521..000000000000 --- a/pkgs/applications/science/logic/acgtk/use-nix-ocaml-byteflags.patch +++ /dev/null @@ -1,11 +0,0 @@ ---- acg-1.1-20140905/src/Makefile.master.in 2014-10-27 10:59:42.263382081 +0100 -+++ acg-1.1-20140905/src/Makefile.master.in.new 2014-10-27 10:59:59.683597972 +0100 -@@ -23,7 +23,7 @@ - # All warnings are treated as errors - WARNINGS = @OCAML09WARNINGS@ -warn-error A - COMMONFLAGS= $(WARNINGS) @TYPES@ --BYTEFLAGS = $(COMMONFLAGS) $(DEBUGFLAG) -+BYTEFLAGS = $(COMMONFLAGS) $(DEBUGFLAG) $(NIX_OCAML_BYTEFLAGS) - OPTFLAGS = $(COMMONFLAGS) - LFLAGS= -a - diff --git a/pkgs/applications/science/logic/coq/8.4.nix b/pkgs/applications/science/logic/coq/8.4.nix deleted file mode 100644 index c3da1205ab0c..000000000000 --- a/pkgs/applications/science/logic/coq/8.4.nix +++ /dev/null @@ -1,97 +0,0 @@ -# - coqide compilation can be disabled by setting lablgtk to null; -# - The csdp program used for the Micromega tactic is statically referenced. -# However, coq can build without csdp by setting it to null. -# In this case some Micromega tactics will search the user's path for the csdp program and will fail if it is not found. - -{stdenv, fetchurl, pkgconfig, writeText, ocaml, findlib, camlp5, ncurses, lablgtk ? null, csdp ? null}: - -let - version = "8.4pl6"; - coq-version = "8.4"; - buildIde = lablgtk != null; - ideFlags = if buildIde then "-lablgtkdir ${lablgtk}/lib/ocaml/*/site-lib/lablgtk2 -coqide opt" else ""; - csdpPatch = if csdp != null then '' - substituteInPlace plugins/micromega/sos.ml --replace "; csdp" "; ${csdp}/bin/csdp" - substituteInPlace plugins/micromega/coq_micromega.ml --replace "System.is_in_system_path \"csdp\"" "true" - '' else ""; - -self = -stdenv.mkDerivation { - name = "coq-${version}"; - - inherit coq-version; - inherit ocaml camlp5; - - src = fetchurl { - url = "https://coq.inria.fr/distrib/V${version}/files/coq-${version}.tar.gz"; - sha256 = "1mpbj4yf36kpjg2v2sln12i8dzqn8rag6fd07hslj2lpm4qs4h55"; - }; - - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ ocaml findlib camlp5 ncurses lablgtk ]; - - patches = [ ./configure.patch ]; - - postPatch = '' - UNAME=$(type -tp uname) - RM=$(type -tp rm) - substituteInPlace configure --replace "/bin/uname" "$UNAME" - substituteInPlace tools/beautify-archive --replace "/bin/rm" "$RM" - ${csdpPatch} - ''; - - preConfigure = '' - configureFlagsArray=( - -opt - -camldir ${ocaml}/bin - -camlp5dir $(ocamlfind query camlp5) - ${ideFlags} - ) - ''; - - prefixKey = "-prefix "; - - buildFlags = "revision coq coqide"; - - setupHook = writeText "setupHook.sh" '' - addCoqPath () { - if test -d "''$1/lib/coq/${coq-version}/user-contrib"; then - export COQPATH="''${COQPATH}''${COQPATH:+:}''$1/lib/coq/${coq-version}/user-contrib/" - fi - } - - addEnvHooks "$targetOffset" addCoqPath - ''; - - passthru = { - inherit findlib; - emacsBufferSetup = pkgs: '' - ; Propagate coq paths to children - (inherit-local-permanent coq-prog-name "${self}/bin/coqtop") - (inherit-local-permanent coq-dependency-analyzer "${self}/bin/coqdep") - (inherit-local-permanent coq-compiler "${self}/bin/coqc") - ; If the coq-library path was already set, re-set it based on our current coq - (when (fboundp 'get-coq-library-directory) - (inherit-local-permanent coq-library-directory (get-coq-library-directory)) - (coq-prog-args)) - (mapc (lambda (arg) - (when (file-directory-p (concat arg "/lib/coq/${coq-version}/user-contrib")) - (setenv "COQPATH" (concat (getenv "COQPATH") ":" arg "/lib/coq/${coq-version}/user-contrib")))) '(${stdenv.lib.concatStringsSep " " (map (pkg: "\"${pkg}\"") pkgs)})) - ''; - }; - - meta = with stdenv.lib; { - description = "Formal proof management system"; - longDescription = '' - Coq is a formal proof management system. It provides a formal language - to write mathematical definitions, executable algorithms and theorems - together with an environment for semi-interactive development of - machine-checked proofs. - ''; - homepage = http://coq.inria.fr; - license = licenses.lgpl21; - branch = coq-version; - maintainers = with maintainers; [ roconnor thoughtpolice vbgl ]; - platforms = platforms.unix; - }; -}; in self diff --git a/pkgs/applications/science/logic/coq/configure.patch b/pkgs/applications/science/logic/coq/configure.patch deleted file mode 100644 index aa38ce06e92b..000000000000 --- a/pkgs/applications/science/logic/coq/configure.patch +++ /dev/null @@ -1,11 +0,0 @@ -diff -Nuar coq-8.3pl3-orig/configure coq-8.3pl3/configure ---- coq-8.3pl3-orig/configure 2011-12-19 22:57:30.000000000 +0100 -+++ coq-8.3pl3/configure 2012-03-17 16:38:16.000000000 +0100 -@@ -395,7 +395,6 @@ - ocamlyaccexec=$CAMLBIN/ocamlyacc - ocamlmktopexec=$CAMLBIN/ocamlmktop - ocamlmklibexec=$CAMLBIN/ocamlmklib -- camlp4oexec=$CAMLBIN/camlp4o - esac - - if test ! -f "$CAMLC" ; then diff --git a/pkgs/applications/science/logic/coq/default.nix b/pkgs/applications/science/logic/coq/default.nix index 040d722f9410..5fab9788a94a 100644 --- a/pkgs/applications/science/logic/coq/default.nix +++ b/pkgs/applications/science/logic/coq/default.nix @@ -25,6 +25,7 @@ let "8.8.0" = "13a4fka22hdxsjk11mgjb9ffzplfxyxp1sg5v1c8nk1grxlscgw8"; "8.8.1" = "1hlf58gwazywbmfa48219amid38vqdl94yz21i11b4map6jfwhbk"; "8.8.2" = "1lip3xja924dm6qblisk1bk0x8ai24s5xxqxphbdxj6djglj68fd"; + "8.9+beta1" = "1yxv2klqal3mh6symi3gc6gv3xm684zlld2c0b6ijhjmp865cin8"; }."${version}"; coq-version = builtins.substring 0 3 version; ideFlags = if buildIde then "-lablgtkdir ${ocamlPackages.lablgtk}/lib/ocaml/*/site-lib/lablgtk2 -coqide opt" else ""; diff --git a/pkgs/applications/science/logic/yices/default.nix b/pkgs/applications/science/logic/yices/default.nix index 3121a83e5b98..0ab08db67465 100644 --- a/pkgs/applications/science/logic/yices/default.nix +++ b/pkgs/applications/science/logic/yices/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { name = "yices-${version}"; - version = "2.6.0"; + version = "2.6.1"; src = fetchurl { url = "https://github.com/SRI-CSL/yices2/archive/Yices-${version}.tar.gz"; name = "${name}-src.tar.gz"; - sha256 = "10ikq7ib8jhx7hlxfm6mp5qg6r8dflqs8242q5zaicn80qixpm12"; + sha256 = "14xvflv14qn8ssm8rklvckp6l1q94vn49qz2snz73j40nwzshaww"; }; nativeBuildInputs = [ autoreconfHook ]; diff --git a/pkgs/applications/science/logic/z3/default.nix b/pkgs/applications/science/logic/z3/default.nix index 1cbe914779e6..f7d67d82cbc8 100644 --- a/pkgs/applications/science/logic/z3/default.nix +++ b/pkgs/applications/science/logic/z3/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "z3-${version}"; - version = "4.7.1"; + version = "4.8.1"; src = fetchFromGitHub { owner = "Z3Prover"; repo = "z3"; - rev = "3b1b82bef05a1b5fd69ece79c80a95fb6d72a990"; - sha256 = "1s850r6qifwl83zzgvrb5l0jigvmymzpv18ph71hg2bcpk7kjw3d"; + rev = name; + sha256 = "1vr57bwx40sd5riijyrhy70i2wnv9xrdihf6y5zdz56yq88rl48f"; }; buildInputs = [ python fixDarwinDylibNames ]; diff --git a/pkgs/applications/science/math/nasc/default.nix b/pkgs/applications/science/math/nasc/default.nix index cac403b131b8..bba08e3ae291 100644 --- a/pkgs/applications/science/math/nasc/default.nix +++ b/pkgs/applications/science/math/nasc/default.nix @@ -7,49 +7,39 @@ , gnome3 , cmake , ninja -, vala +, vala_0_40 , libqalculate , gobjectIntrospection , wrapGAppsHook }: stdenv.mkDerivation rec { name = "nasc-${version}"; - version = "0.4.7"; + version = "0.5.0"; src = fetchFromGitHub { owner = "parnold-x"; repo = "nasc"; rev = version; - sha256 = "0p74953pdgsijvqj3msssqiwm6sc1hzp68dlmjamqrqirwgqv5aa"; + sha256 = "1rrp3djsv7lrgsqjn7x50msv0c5ffhz90lj1v11di0kp05m6q9j9"; }; - patches = [ - # Install libqalculatenasc.so - (fetchpatch { - url = https://github.com/parnold-x/nasc/commit/93a799f9afb3e32f3f1a54e056b59570aae2e437.patch; - sha256 = "1m32w2zaswzxnzbr7p3lf8s6fac4mjvfhm8v9k59b4jyzmvrl631"; - }) - (fetchpatch { - url = https://github.com/parnold-x/nasc/commit/570b49169326de154af2cf43c5f12268fff1dc6d.patch; - sha256 = "1y3w6rxn0453iscx2xg427wy1bd5kv4z1c41hhbjmg614ycp6bka"; - }) - ]; - nativeBuildInputs = [ pkgconfig wrapGAppsHook - vala + vala_0_40 # should be `elementary.vala` when elementary attribute set is merged cmake ninja gobjectIntrospection # for setup-hook ]; + buildInputs = [ - libqalculate - gtk3 - granite + gnome3.defaultIconTheme # should be `elementary.defaultIconTheme`when elementary attribute set is merged + gnome3.gtksourceview gnome3.libgee gnome3.libsoup - gnome3.gtksourceview + granite + gtk3 + libqalculate ]; meta = with stdenv.lib; { diff --git a/pkgs/applications/science/misc/simgrid/default.nix b/pkgs/applications/science/misc/simgrid/default.nix index b6cd8c294c1b..258073e4080b 100644 --- a/pkgs/applications/science/misc/simgrid/default.nix +++ b/pkgs/applications/science/misc/simgrid/default.nix @@ -18,13 +18,13 @@ in stdenv.mkDerivation rec { name = "simgrid-${version}"; - version = "3.20"; + version = "3.21"; src = fetchFromGitHub { owner = "simgrid"; repo = "simgrid"; - rev = "v${version}"; - sha256 = "0xb20qhvsah2dz2hvn850i3w9a5ghsbcx8vka2ap6xsdkxf593gy"; + rev = "v${replaceChars ["."] ["_"] version}"; + sha256 = "1v0dwlww2wl56ms8lvg5zwffzbmz3sjzpkqc73f714mrc9g02bxs"; }; nativeBuildInputs = [ cmake perl python3 boost valgrind ] @@ -107,6 +107,6 @@ stdenv.mkDerivation rec { homepage = http://simgrid.gforge.inria.fr/; license = licenses.lgpl2Plus; maintainers = with maintainers; [ mickours ]; - platforms = platforms.x86_64; + platforms = ["x86_64-linux"]; }; } diff --git a/pkgs/applications/version-management/git-and-tools/git-big-picture/default.nix b/pkgs/applications/version-management/git-and-tools/git-big-picture/default.nix index 6918f048eae3..7a47ed9a992d 100644 --- a/pkgs/applications/version-management/git-and-tools/git-big-picture/default.nix +++ b/pkgs/applications/version-management/git-and-tools/git-big-picture/default.nix @@ -2,7 +2,7 @@ python2Packages.buildPythonApplication rec { pname = "git-big-picture"; - version = "0.9.0"; + version = "0.10.1"; name = "${pname}-${version}"; @@ -10,7 +10,7 @@ python2Packages.buildPythonApplication rec { owner = "esc"; repo = pname; rev = "v${version}"; - sha256 = "1h283gzs4nx8lrarmr454zza52cilmnbdrqn1n33v3cn1rayl3c9"; + sha256 = "0b0zdq7d7k7f6p3wwc799347fraphbr20rxd1ysnc4xi1cj4wpmi"; }; buildInputs = [ git graphviz ]; @@ -21,7 +21,7 @@ python2Packages.buildPythonApplication rec { ''; meta = { - description = "Tool for visualization of Git repositories."; + description = "Tool for visualization of Git repositories"; homepage = https://github.com/esc/git-big-picture; license = stdenv.lib.licenses.gpl3; platforms = stdenv.lib.platforms.linux; diff --git a/pkgs/applications/version-management/git-and-tools/grv/default.nix b/pkgs/applications/version-management/git-and-tools/grv/default.nix index 962ddf98d6ce..dd080799557b 100644 --- a/pkgs/applications/version-management/git-and-tools/grv/default.nix +++ b/pkgs/applications/version-management/git-and-tools/grv/default.nix @@ -1,6 +1,6 @@ { stdenv, buildGo19Package, fetchFromGitHub, curl, libgit2_0_27, ncurses, pkgconfig, readline }: let - version = "0.2.0"; + version = "0.3.0"; in buildGo19Package { name = "grv-${version}"; @@ -14,10 +14,14 @@ buildGo19Package { owner = "rgburke"; repo = "grv"; rev = "v${version}"; - sha256 = "0hlqw6b51jglqzzjgazncckpgarp25ghshl0lxv1mff80jg8wd1a"; + sha256 = "00v502mwnpv09l7fsbq3s72i5fz5dxbildwxgw0r8zzf6d54xrgl"; fetchSubmodules = true; }; + postPatch = '' + rm util/update_latest_release.go + ''; + buildFlagsArray = [ "-ldflags=" "-X main.version=${version}" ]; meta = with stdenv.lib; { diff --git a/pkgs/applications/version-management/git-and-tools/hub/default.nix b/pkgs/applications/version-management/git-and-tools/hub/default.nix index 113d7f78b905..e01101c6a662 100644 --- a/pkgs/applications/version-management/git-and-tools/hub/default.nix +++ b/pkgs/applications/version-management/git-and-tools/hub/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "hub-${version}"; - version = "2.5.1"; + version = "2.6.0"; goPackagePath = "github.com/github/hub"; @@ -10,10 +10,11 @@ buildGoPackage rec { owner = "github"; repo = "hub"; rev = "v${version}"; - sha256 = "0a5i351v998vdwf883qhh39c15x56db01fr9hscz4ha7r9550pqg"; + sha256 = "0hxmbpyv2yjxg4v3z50x5ikgcz7mgv5prya8jcpi277vq2s0wwa1"; }; - buildInputs = [ groff ronn ruby utillinux ] ++ + nativeBuildInputs = [ groff ronn utillinux ]; + buildInputs = [ ruby ] ++ stdenv.lib.optional stdenv.isDarwin Security; postPatch = '' @@ -29,7 +30,7 @@ buildGoPackage rec { install -D etc/hub.fish_completion "$bin/share/fish/vendor_completions.d/hub.fish" make man-pages - cp -r share/man $bin/share/man + cp -vr --parents share/man/man[1-9]/*.[1-9] $bin/ ''; meta = with stdenv.lib; { diff --git a/pkgs/applications/version-management/gitea/default.nix b/pkgs/applications/version-management/gitea/default.nix index 58cfa1862604..a25492e4546c 100644 --- a/pkgs/applications/version-management/gitea/default.nix +++ b/pkgs/applications/version-management/gitea/default.nix @@ -39,7 +39,7 @@ buildGoPackage rec { postInstall = '' mkdir $data - cp -R $src/{public,templates} $data + cp -R $src/{public,templates,options} $data mkdir -p $out cp -R $src/options/locale $out/locale diff --git a/pkgs/applications/version-management/gitlab/default.nix b/pkgs/applications/version-management/gitlab/default.nix index ba37091c433f..c1c4d20feacb 100644 --- a/pkgs/applications/version-management/gitlab/default.nix +++ b/pkgs/applications/version-management/gitlab/default.nix @@ -11,29 +11,29 @@ let groups = [ "default" "unicorn" "ed25519" "metrics" ]; }; - version = "11.4.0"; + version = "11.4.4"; sources = if gitlabEnterprise then { gitlabDeb = fetchurl { url = "https://packages.gitlab.com/gitlab/gitlab-ee/packages/debian/stretch/gitlab-ee_${version}-ee.0_amd64.deb/download.deb"; - sha256 = "1y2a8acgsgrgcjazijsflhxq4fwqvd9yhrjx5pcncb24vl0x6dg4"; + sha256 = "15lpcdjcw6lpmzlhqnpd6pgaxh7wvx2mldjd1vqr414r4bcnhgy4"; }; gitlab = fetchFromGitLab { owner = "gitlab-org"; repo = "gitlab-ee"; rev = "v${version}-ee"; - sha256 = "1pyqk1c5bml7chs4pq1fcxkrhk5r327xx9my6zmp2cb503s5m590"; + sha256 = "046hchr7q4jnx3j4yxg3rdixfzlva35al3ci26pf9vxrbbl5y8cg"; }; } else { gitlabDeb = fetchurl { url = "https://packages.gitlab.com/gitlab/gitlab-ce/packages/debian/stretch/gitlab-ce_${version}-ce.0_amd64.deb/download.deb"; - sha256 = "0wiizjihn1a6hg6a2wpwmnh5a34n102va4djac3sgx74mwx4bniq"; + sha256 = "02p7azyjgb984bk491q6f4zk1mikbcd38rif08kl07bjjzzkir81"; }; gitlab = fetchFromGitLab { owner = "gitlab-org"; repo = "gitlab-ce"; rev = "v${version}"; - sha256 = "1a8pavqc9bblss5z9ikc9b0k0ra33vw73zy7rvn0v1wgvbqpc24k"; + sha256 = "1hq9iyp0xrxwmncn61ja3pdj9h2hmdy1l63d1ic3r1dyacybaf2g"; }; }; @@ -63,17 +63,7 @@ stdenv.mkDerivation rec { --replace "ps -U" "${procps}/bin/ps -U" sed -i '/ask_to_continue/d' lib/tasks/gitlab/two_factor.rake - - # required for some gems: - cat > config/database.yml <<EOF - production: - adapter: <%= ENV["GITLAB_DATABASE_ADAPTER"] || sqlite %> - database: gitlab - host: <%= ENV["GITLAB_DATABASE_HOST"] || "127.0.0.1" %> - password: <%= ENV["GITLAB_DATABASE_PASSWORD"] || "blerg" %> - username: gitlab - encoding: utf8 - EOF + sed -ri -e '/log_level/a config.logger = Logger.new(STDERR)' config/environments/production.rb ''; buildPhase = '' diff --git a/pkgs/applications/version-management/pijul/default.nix b/pkgs/applications/version-management/pijul/default.nix index 1a8fe6f5fe5c..7419c52c48b3 100644 --- a/pkgs/applications/version-management/pijul/default.nix +++ b/pkgs/applications/version-management/pijul/default.nix @@ -1,24 +1,35 @@ -{ stdenv, fetchurl, rustPlatform, darwin }: +{ stdenv, fetchurl, rustPlatform, darwin, openssl, libsodium, pkgconfig }: with rustPlatform; buildRustPackage rec { name = "pijul-${version}"; - version = "0.8.0"; + version = "0.10.0"; src = fetchurl { url = "https://pijul.org/releases/${name}.tar.gz"; - sha256 = "00pi03yp2bgnjpsz2hgaapxfw2i4idbjqc88cagpvn4yr1612wqx"; + sha256 = "1lkipcp83rfsj9yqddvb46dmqdf2ch9njwvjv8f3g91rmfjcngys"; }; - sourceRoot = "${name}/pijul"; + cargoPatches = [ + ./libpijul.patch + ]; - buildInputs = stdenv.lib.optionals stdenv.isDarwin + nativeBuildInputs = [ pkgconfig ]; + + postInstall = '' + mkdir -p $out/share/{bash-completion/completions,zsh/site-functions,fish/vendor_completions.d} + $out/bin/pijul generate-completions --bash > $out/share/bash-completion/completions/pijul + $out/bin/pijul generate-completions --zsh > $out/share/zsh/site-functions/_pijul + $out/bin/pijul generate-completions --fish > $out/share/fish/vendor_completions.d/pijul.fish + ''; + + buildInputs = [ openssl libsodium ] ++ stdenv.lib.optionals stdenv.isDarwin (with darwin.apple_sdk.frameworks; [ Security ]); doCheck = false; - cargoSha256 = "1cnr08qbpia3336l37k1jli20d7kwnrw2gys8s9mg271cb4vdx03"; + cargoSha256 = "1419mlxa4p53hm5qzfd1yi2k0n1bcv8kaslls1nyx661vknhfamw"; meta = with stdenv.lib; { description = "A distributed version control system"; diff --git a/pkgs/applications/version-management/pijul/libpijul.patch b/pkgs/applications/version-management/pijul/libpijul.patch new file mode 100644 index 000000000000..9e4aa3cdd4b7 --- /dev/null +++ b/pkgs/applications/version-management/pijul/libpijul.patch @@ -0,0 +1,61 @@ +--- 2/pijul-0.10.0/Cargo.lock 1970-01-01 01:00:00.000000000 +0100 ++++ pijul-0.10.0/Cargo.lock 2018-10-28 10:09:48.557639255 +0000 +@@ -552,7 +552,7 @@ + + [[package]] + name = "libpijul" +-version = "0.10.0" ++version = "0.10.1" + dependencies = [ + "base64 0.9.0 (registry+https://github.com/rust-lang/crates.io-index)", + "bincode 0.8.0 (registry+https://github.com/rust-lang/crates.io-index)", +@@ -577,9 +577,29 @@ + + [[package]] + name = "libpijul" +-version = "0.10.0" ++version = "0.10.2" + source = "registry+https://github.com/rust-lang/crates.io-index" +-replace = "libpijul 0.10.0" ++dependencies = [ ++ "base64 0.9.0 (registry+https://github.com/rust-lang/crates.io-index)", ++ "bincode 0.8.0 (registry+https://github.com/rust-lang/crates.io-index)", ++ "bitflags 1.0.1 (registry+https://github.com/rust-lang/crates.io-index)", ++ "bs58 0.2.0 (registry+https://github.com/rust-lang/crates.io-index)", ++ "byteorder 1.2.2 (registry+https://github.com/rust-lang/crates.io-index)", ++ "chrono 0.4.2 (registry+https://github.com/rust-lang/crates.io-index)", ++ "error-chain 0.11.0 (registry+https://github.com/rust-lang/crates.io-index)", ++ "flate2 1.0.1 (registry+https://github.com/rust-lang/crates.io-index)", ++ "hex 0.3.2 (registry+https://github.com/rust-lang/crates.io-index)", ++ "ignore 0.3.1 (registry+https://github.com/rust-lang/crates.io-index)", ++ "log 0.4.1 (registry+https://github.com/rust-lang/crates.io-index)", ++ "openssl 0.10.6 (registry+https://github.com/rust-lang/crates.io-index)", ++ "rand 0.4.2 (registry+https://github.com/rust-lang/crates.io-index)", ++ "sanakirja 0.8.16 (registry+https://github.com/rust-lang/crates.io-index)", ++ "serde 1.0.41 (registry+https://github.com/rust-lang/crates.io-index)", ++ "serde_derive 1.0.41 (registry+https://github.com/rust-lang/crates.io-index)", ++ "serde_json 1.0.15 (registry+https://github.com/rust-lang/crates.io-index)", ++ "tempdir 0.3.7 (registry+https://github.com/rust-lang/crates.io-index)", ++ "thrussh-keys 0.9.5 (registry+https://github.com/rust-lang/crates.io-index)", ++] + + [[package]] + name = "line" +@@ -917,7 +937,7 @@ + "hex 0.3.2 (registry+https://github.com/rust-lang/crates.io-index)", + "ignore 0.3.1 (registry+https://github.com/rust-lang/crates.io-index)", + "isatty 0.1.7 (registry+https://github.com/rust-lang/crates.io-index)", +- "libpijul 0.10.0 (registry+https://github.com/rust-lang/crates.io-index)", ++ "libpijul 0.10.2 (registry+https://github.com/rust-lang/crates.io-index)", + "line 0.1.1 (registry+https://github.com/rust-lang/crates.io-index)", + "log 0.4.1 (registry+https://github.com/rust-lang/crates.io-index)", + "pager 0.14.0 (registry+https://github.com/rust-lang/crates.io-index)", +@@ -1796,7 +1816,7 @@ + "checksum lazycell 0.6.0 (registry+https://github.com/rust-lang/crates.io-index)" = "a6f08839bc70ef4a3fe1d566d5350f519c5912ea86be0df1740a7d247c7fc0ef" + "checksum libc 0.2.40 (registry+https://github.com/rust-lang/crates.io-index)" = "6fd41f331ac7c5b8ac259b8bf82c75c0fb2e469bbf37d2becbba9a6a2221965b" + "checksum libflate 0.1.14 (registry+https://github.com/rust-lang/crates.io-index)" = "1a429b86418868c7ea91ee50e9170683f47fd9d94f5375438ec86ec3adb74e8e" +-"checksum libpijul 0.10.0 (registry+https://github.com/rust-lang/crates.io-index)" = "80fd579ba6762eac3f12c9624d5496edaba5a2f2e8785bcf8310372328e06ebe" ++"checksum libpijul 0.10.2 (registry+https://github.com/rust-lang/crates.io-index)" = "cf6fc1aa0e9402f8283bdeb2507cfb6798d2f2f973da34c3f4b0c96a456b74cd" + "checksum line 0.1.1 (registry+https://github.com/rust-lang/crates.io-index)" = "ecdd22a3856203276b7854e16213139428e82922530438f36356e5b361ea4a42" + "checksum log 0.3.9 (registry+https://github.com/rust-lang/crates.io-index)" = "e19e8d5c34a3e0e2223db8e060f9e8264aeeb5c5fc64a4ee9965c062211c024b" + "checksum log 0.4.1 (registry+https://github.com/rust-lang/crates.io-index)" = "89f010e843f2b1a31dbd316b3b8d443758bc634bed37aabade59c686d644e0a2" diff --git a/pkgs/applications/version-management/smartgithg/default.nix b/pkgs/applications/version-management/smartgithg/default.nix index 106b66bcfecb..d6ae37c3f7fa 100644 --- a/pkgs/applications/version-management/smartgithg/default.nix +++ b/pkgs/applications/version-management/smartgithg/default.nix @@ -7,11 +7,11 @@ stdenv.mkDerivation rec { name = "smartgithg-${version}"; - version = "18_1_4"; + version = "18_1_5"; src = fetchurl { url = "https://www.syntevo.com/downloads/smartgit/smartgit-linux-${version}.tar.gz"; - sha256 = "18gyfcs5g7xq8fqnn1zjzx350jaynrniain0giay8sxych12p4cm"; + sha256 = "0f2aj3259jvn7n0x6m8sbwliikln9lqffd00jg75dblhxwl8adg3"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/applications/video/qgifer/default.nix b/pkgs/applications/video/qgifer/default.nix deleted file mode 100644 index 8185e15dcc8b..000000000000 --- a/pkgs/applications/video/qgifer/default.nix +++ /dev/null @@ -1,25 +0,0 @@ -{ stdenv, fetchsvn, cmake, opencv, qt4, giflib }: - -stdenv.mkDerivation rec { - name = "qgifer-${version}"; - version = "0.2.1"; - - src = fetchsvn { - url = "https://svn.code.sf.net/p/qgifer/code/tags/${name}"; - sha256 = "0fv40n58xjwfr06ix9ga79hs527rrzfaq1sll3n2xxchpgf3wf4f"; - }; - - postPatch = '' - substituteInPlace CMakeLists.txt --replace "SET(CMAKE_INSTALL_PREFIX" "#" - ''; - - buildInputs = [ cmake opencv qt4 giflib ]; - - meta = with stdenv.lib; { - description = "Video-based animated GIF creator"; - homepage = https://sourceforge.net/projects/qgifer/; - license = licenses.gpl3; - platforms = platforms.unix; - maintainers = [ maintainers.andrewrk ]; - }; -} diff --git a/pkgs/applications/window-managers/jwm/jwm-settings-manager.nix b/pkgs/applications/window-managers/jwm/jwm-settings-manager.nix new file mode 100644 index 000000000000..3b764e7095be --- /dev/null +++ b/pkgs/applications/window-managers/jwm/jwm-settings-manager.nix @@ -0,0 +1,44 @@ +{ stdenv, fetchFromGitHub, cmake, pkgconfig, gettext, libXpm, libGL, fltk, hicolor-icon-theme, glib, gnome2, which }: + +stdenv.mkDerivation rec { + name = "jwm-settings-manager-${version}"; + version = "2018-10-19"; + + src = fetchFromGitHub { + owner = "Israel-D"; + repo = "jwm-settings-manager"; + rev = "cb32a70563cf1f3927339093481542b85ec3c8c8"; + sha256 = "0d5bqf74p8zg8azns44g46q973blhmp715k8kcd73x88g7sfir8s"; + }; + + nativeBuildInputs = [ + cmake + pkgconfig + gettext + ]; + + buildInputs = [ + libXpm + libGL + fltk + hicolor-icon-theme + which # needed at runtime to locate optional programs + glib.bin # provides gsettings + gnome2.GConf # provides gconftool-2 + ]; + + postPatch = '' + substituteInPlace CMakeLists.txt \ + --replace 'CMAKE_INSTALL_PREFIX "/usr"' "CMAKE_INSTALL_PREFIX $out" + substituteInPlace data/CMakeLists.txt \ + --replace 'DESTINATION usr/share' "DESTINATION share" + ''; + + meta = with stdenv.lib; { + description = "A full configuration manager for JWM"; + homepage = https://joewing.net/projects/jwm; + license = licenses.gpl3; + platforms = platforms.linux; + maintainers = [ maintainers.romildo ]; + }; +} diff --git a/pkgs/build-support/bintools-wrapper/default.nix b/pkgs/build-support/bintools-wrapper/default.nix index f9ca245beea6..3ac1e52f3092 100644 --- a/pkgs/build-support/bintools-wrapper/default.nix +++ b/pkgs/build-support/bintools-wrapper/default.nix @@ -186,6 +186,7 @@ stdenv.mkDerivation { }.${targetPlatform.parsed.cpu.name} else if targetPlatform.isPower then if targetPlatform.isBigEndian then "ppc" else "lppc" else if targetPlatform.isSparc then "sparc" + else if targetPlatform.isAvr then "avr" else throw "unknown emulation for platform: " + targetPlatform.config; in targetPlatform.platform.bfdEmulation or (fmt + sep + arch); @@ -209,7 +210,7 @@ stdenv.mkDerivation { ## General libc support ## - echo "-L${libc_lib}/lib" > $out/nix-support/libc-ldflags + echo "-L${libc_lib}${libc.libdir or "/lib"}" > $out/nix-support/libc-ldflags echo "${libc_lib}" > $out/nix-support/orig-libc echo "${libc_dev}" > $out/nix-support/orig-libc-dev @@ -292,6 +293,16 @@ stdenv.mkDerivation { hardening_unsupported_flags+=" pic" '' + + optionalString targetPlatform.isAvr '' + hardening_unsupported_flags+=" relro bindnow" + '' + + + optionalString (libc != null && targetPlatform.isAvr) '' + for isa in avr5 avr3 avr4 avr6 avr25 avr31 avr35 avr51 avrxmega2 avrxmega4 avrxmega5 avrxmega6 avrxmega7 tiny-stack; do + echo "-L${getLib libc}/avr/lib/$isa" >> $out/nix-support/libc-cflags + done + '' + + '' set +u substituteAll ${./add-flags.sh} $out/nix-support/add-flags.sh diff --git a/pkgs/build-support/build-fhs-userenv/chrootenv/default.nix b/pkgs/build-support/build-fhs-userenv/chrootenv/default.nix index 375c30e1e463..70a7a43bd398 100644 --- a/pkgs/build-support/build-fhs-userenv/chrootenv/default.nix +++ b/pkgs/build-support/build-fhs-userenv/chrootenv/default.nix @@ -1,18 +1,15 @@ -{ stdenv, pkgconfig, glib }: +{ stdenv, meson, ninja, pkgconfig, glib }: stdenv.mkDerivation { name = "chrootenv"; + src = ./.; - nativeBuildInputs = [ pkgconfig ]; + nativeBuildInputs = [ meson ninja pkgconfig ]; buildInputs = [ glib ]; - buildCommand = '' - cc ${./chrootenv.c} $(pkg-config --cflags --libs glib-2.0) -o $out - ''; - meta = with stdenv.lib; { description = "Setup mount/user namespace for FHS emulation"; - license = licenses.free; + license = licenses.mit; maintainers = with maintainers; [ yegortimoshenko ]; platforms = platforms.linux; }; diff --git a/pkgs/build-support/build-fhs-userenv/chrootenv/meson.build b/pkgs/build-support/build-fhs-userenv/chrootenv/meson.build new file mode 100644 index 000000000000..6d0770a0dc4a --- /dev/null +++ b/pkgs/build-support/build-fhs-userenv/chrootenv/meson.build @@ -0,0 +1,5 @@ +project('chrootenv', 'c') + +glib = dependency('glib-2.0') + +executable('chrootenv', 'chrootenv.c', dependencies: [glib], install: true) diff --git a/pkgs/build-support/build-fhs-userenv/default.nix b/pkgs/build-support/build-fhs-userenv/default.nix index c733556de45c..707b256cd4b4 100644 --- a/pkgs/build-support/build-fhs-userenv/default.nix +++ b/pkgs/build-support/build-fhs-userenv/default.nix @@ -28,7 +28,7 @@ in runCommand name { passthru = passthru // { env = runCommand "${name}-shell-env" { shellHook = '' - exec ${chrootenv} ${init "bash"} "$(pwd)" + exec ${chrootenv}/bin/chrootenv ${init runScript} "$(pwd)" ''; } '' echo >&2 "" @@ -41,7 +41,7 @@ in runCommand name { mkdir -p $out/bin cat <<EOF >$out/bin/${name} #! ${stdenv.shell} - exec ${chrootenv} ${init runScript} "\$(pwd)" "\$@" + exec ${chrootenv}/bin/chrootenv ${init runScript} "\$(pwd)" "\$@" EOF chmod +x $out/bin/${name} ${extraInstallCommands} diff --git a/pkgs/build-support/cc-wrapper/default.nix b/pkgs/build-support/cc-wrapper/default.nix index e59758371a38..06aa9436bfc0 100644 --- a/pkgs/build-support/cc-wrapper/default.nix +++ b/pkgs/build-support/cc-wrapper/default.nix @@ -232,7 +232,7 @@ stdenv.mkDerivation { # compile, because it uses "#include_next <limits.h>" to find the # limits.h file in ../includes-fixed. To remedy the problem, # another -idirafter is necessary to add that directory again. - echo "-B${libc_lib}/lib/ -idirafter ${libc_dev}/include ${optionalString isGNU "-idirafter ${cc}/lib/gcc/*/*/include-fixed"}" > $out/nix-support/libc-cflags + echo "-B${libc_lib}${libc.libdir or "/lib/"} -idirafter ${libc_dev}${libc.incdir or "/include"} ${optionalString isGNU "-idirafter ${cc}/lib/gcc/*/*/include-fixed"}" > $out/nix-support/libc-cflags echo "${libc_lib}" > $out/nix-support/orig-libc echo "${libc_dev}" > $out/nix-support/orig-libc-dev @@ -284,6 +284,20 @@ stdenv.mkDerivation { hardening_unsupported_flags+=" stackprotector" '' + + optionalString targetPlatform.isAvr '' + hardening_unsupported_flags+=" stackprotector pic" + '' + + + optionalString (targetPlatform.libc == "newlib") '' + hardening_unsupported_flags+=" stackprotector fortify pie pic" + '' + + + optionalString (libc != null && targetPlatform.isAvr) '' + for isa in avr5 avr3 avr4 avr6 avr25 avr31 avr35 avr51 avrxmega2 avrxmega4 avrxmega5 avrxmega6 avrxmega7 tiny-stack; do + echo "-B${getLib libc}/avr/lib/$isa" >> $out/nix-support/libc-cflags + done + '' + + '' substituteAll ${./add-flags.sh} $out/nix-support/add-flags.sh substituteAll ${./add-hardening.sh} $out/nix-support/add-hardening.sh diff --git a/pkgs/build-support/rust/default-crate-overrides.nix b/pkgs/build-support/rust/default-crate-overrides.nix index d93e0a5f56df..da3f0a59eb60 100644 --- a/pkgs/build-support/rust/default-crate-overrides.nix +++ b/pkgs/build-support/rust/default-crate-overrides.nix @@ -6,76 +6,97 @@ let inherit (darwin.apple_sdk.frameworks) CoreFoundation Security; in { + cairo-rs = attrs: { + buildInputs = [ cairo ]; + }; + cargo = attrs: { buildInputs = [ openssl zlib curl ] ++ stdenv.lib.optionals stdenv.isDarwin [ CoreFoundation libiconv ]; # TODO: buildRustCrate seems to use incorrect default inference crateBin = [ { name = "cargo"; path = "src/bin/cargo.rs"; } ]; }; + cargo-vendor = attrs: { buildInputs = [ openssl zlib curl ]; # TODO: this defaults to cargo_vendor; needs to be cargo-vendor to # be considered a cargo subcommand. crateBin = [ { name = "cargo-vendor"; path = "src/main.rs"; } ]; }; + curl-sys = attrs: { buildInputs = [ pkgconfig zlib curl ]; propagatedBuildInputs = [ curl zlib ]; extraLinkFlags = ["-L${zlib.out}/lib"]; }; + + dbus = attrs: { + buildInputs = [ pkgconfig dbus ]; + }; + + gobject-sys = attrs: { + buildInputs = [ dbus-glib ]; + }; + + gio-sys = attrs: { + buildInputs = [ dbus-glib ]; + }; + + gdk-pixbuf-sys = attrs: { + buildInputs = [ dbus-glib ]; + }; + + gdk-pixbuf = attrs: { + buildInputs = [ gdk_pixbuf ]; + }; + libgit2-sys = attrs: { LIBGIT2_SYS_USE_PKG_CONFIG = true; buildInputs = [ pkgconfig openssl zlib libgit2 ]; }; + libsqlite3-sys = attrs: { buildInputs = [ pkgconfig sqlite ]; }; + libssh2-sys = attrs: { buildInputs = [ pkgconfig openssl zlib libssh2 ]; }; + + libdbus-sys = attrs: { + buildInputs = [ pkgconfig dbus ]; + }; + openssl = attrs: { buildInputs = [ openssl ]; }; + openssl-sys = attrs: { buildInputs = [ pkgconfig openssl ]; }; - dbus = attrs: { - buildInputs = [ pkgconfig dbus ]; - }; - libdbus-sys = attrs: { - buildInputs = [ pkgconfig dbus ]; - }; - gobject-sys = attrs: { - buildInputs = [ dbus-glib ]; - }; - gio-sys = attrs: { - buildInputs = [ dbus-glib ]; - }; - gdk-pixbuf-sys = attrs: { - buildInputs = [ dbus-glib ]; - }; - gdk-pixbuf = attrs: { - buildInputs = [ gdk_pixbuf ]; + pq-sys = attr: { + buildInputs = [ pkgconfig postgresql ]; }; + rink = attrs: { buildInputs = [ gmp ]; crateBin = [ { name = "rink"; path = "src/bin/rink.rs"; } ]; }; - cairo-rs = attrs: { - buildInputs = [ cairo ]; + + security-framework-sys = attr: { + propagatedBuildInputs = [ Security ]; }; - xcb = attrs: { - buildInputs = [ python3 ]; + + serde_derive = attrs: { + buildInputs = stdenv.lib.optional stdenv.isDarwin Security; }; thrussh-libsodium = attrs: { buildInputs = [ pkgconfig libsodium ]; }; - pq-sys = attr: { - buildInputs = [ pkgconfig postgresql ]; - }; - security-framework-sys = attr: { - propagatedBuildInputs = [ Security ]; + + xcb = attrs: { + buildInputs = [ python3 ]; }; } diff --git a/pkgs/build-support/setup-hooks/auto-patchelf.sh b/pkgs/build-support/setup-hooks/auto-patchelf.sh index 7c165627f72e..d1ae317ff9a4 100644 --- a/pkgs/build-support/setup-hooks/auto-patchelf.sh +++ b/pkgs/build-support/setup-hooks/auto-patchelf.sh @@ -7,7 +7,16 @@ gatherLibraries() { addEnvHooks "$targetOffset" gatherLibraries isExecutable() { - readelf -h "$1" 2> /dev/null | grep -q '^ *Type: *EXEC\>' + # For dynamically linked ELF files it would be enough to check just for the + # INTERP section. However, we won't catch statically linked executables as + # they only have an ELF type of EXEC but no INTERP. + # + # So what we do here is just check whether *either* the ELF type is EXEC + # *or* there is an INTERP section. This also catches position-independent + # executables, as they typically have an INTERP section but their ELF type + # is DYN. + LANG=C readelf -h -l "$1" 2> /dev/null \ + | grep -q '^ *Type: *EXEC\>\|^ *INTERP\>' } # We cache dependencies so that we don't need to search through all of them on @@ -157,7 +166,7 @@ autoPatchelf() { isELF "$file" || continue if isExecutable "$file"; then # Skip if the executable is statically linked. - readelf -l "$file" | grep -q "^ *INTERP\\>" || continue + LANG=C readelf -l "$file" | grep -q "^ *INTERP\\>" || continue fi autoPatchelfFile "$file" done < <(find "$prefix" -type f -print0) diff --git a/pkgs/build-support/templaterpm/nix-template-rpm.py b/pkgs/build-support/templaterpm/nix-template-rpm.py index ec3a619027e7..f39595f89776 100755 --- a/pkgs/build-support/templaterpm/nix-template-rpm.py +++ b/pkgs/build-support/templaterpm/nix-template-rpm.py @@ -44,14 +44,14 @@ class SPECTemplate(object): self.key = self.getSelfKey() tmpDir = os.path.join(outputDir, self.rewriteName(self.spec.sourceHeader['name'])) - if self.translateTable != None: + if self.translateTable is not None: self.relOutputDir = self.translateTable.path(self.key,tmpDir) else: self.relOutputDir = tmpDir self.final_output_dir = os.path.normpath( self.relOutputDir ) - if self.repositoryDir != None: + if self.repositoryDir is not None: self.potential_repository_dir = os.path.normpath( os.path.join(self.repositoryDir,self.relOutputDir) ) @@ -59,7 +59,7 @@ class SPECTemplate(object): def rewriteCommands(self, string): string = string.replace('SPACER_DIR_FOR_REMOVAL/','') string = string.replace('SPACER_DIR_FOR_REMOVAL','') - string = '\n'.join(map(lambda line: ' '.join(map(lambda x: x.replace('SOURCE_DIR_SPACER/',('${./' if (self.buildRootInclude == None) else '${buildRoot}/usr/share/buildroot/SOURCES/'))+('}' if (self.buildRootInclude == None) else '') if x.startswith('SOURCE_DIR_SPACER/') else x, line.split(' '))), string.split('\n'))) + string = '\n'.join(map(lambda line: ' '.join(map(lambda x: x.replace('SOURCE_DIR_SPACER/',('${./' if (self.buildRootInclude is None) else '${buildRoot}/usr/share/buildroot/SOURCES/'))+('}' if (self.buildRootInclude is None) else '') if x.startswith('SOURCE_DIR_SPACER/') else x, line.split(' '))), string.split('\n'))) string = string.replace('\n','\n ') string = string.rstrip() return string @@ -82,7 +82,7 @@ class SPECTemplate(object): rewrite = lambda l: ''.join(camelcase(filterDoc(filterDevel(l)))) def filterPackageGroup(target): - if target == None: + if target is None: return [ rewrite(x.split('-')) for x in inputs if (not x.split('-')[0] in self.packageGroups) or (len(x.split('-')) == 1) ] elif target in self.packageGroups: return [ target + '_' + rewrite(x.split('-')[1:]) for x in inputs if (x.split('-')[0] == target) and (len(x.split('-')) > 1)] @@ -90,7 +90,7 @@ class SPECTemplate(object): raise Exception("Unknown target") return [] - if target == None: + if target is None: packages = filterPackageGroup(None) packages.sort() elif target in self.packageGroups: @@ -111,7 +111,7 @@ class SPECTemplate(object): def getBuildInputs(self,target=None): inputs = self.rewriteInputs(target,self.spec.sourceHeader['requires']) - if self.translateTable != None: + if self.translateTable is not None: return map(lambda x: self.translateTable.name(x), inputs) else: return inputs @@ -125,7 +125,7 @@ class SPECTemplate(object): return key def getSelf(self): - if self.translateTable != None: + if self.translateTable is not None: return self.translateTable.name(self.key) else: return self.key @@ -161,7 +161,7 @@ class SPECTemplate(object): facts["sha256"].append(sha256) patches = [source for (source, _, flag) in self.spec.sources if flag==2] - if self.buildRootInclude == None: + if self.buildRootInclude is None: facts["patches"] = map(lambda x: './'+x, patches) else: facts["patches"] = map(lambda x: '"${buildRoot}/usr/share/buildroot/SOURCES/'+x+'"', reversed(patches)) @@ -292,7 +292,7 @@ class SPECTemplate(object): if not os.path.exists(self.final_output_dir): os.makedirs(self.final_output_dir) - if self.inputDir != None: + if self.inputDir is not None: self.copySources(self.inputDir, self.final_output_dir) self.copyPatches(self.inputDir, self.final_output_dir) @@ -334,19 +334,19 @@ class NixTemplate(object): url = re.match(r'^\s*url\s*=\s*"?(.*?)"?\s*;\s*$', line) sha256 = re.match(r'^\s*sha256\s*=\s*"(.*?)"\s*;\s*$', line) patches = re.match(r'^\s*patches\s*=\s*(\[.*?\])\s*;\s*$', line) - if name != None and self.original["name"] == None: + if name is not None and self.original["name"] is None: self.original["name"] = name.group(1) self.matchedLines[n] = "name" - if version != None and self.original["version"] == None: + if version is not None and self.original["version"] is None: self.original["version"] = version.group(1) self.matchedLines[n] = "version" - if url != None and self.original["url"] == None: + if url is not None and self.original["url"] is None: self.original["url"] = url.group(1) self.matchedLines[n] = "url" - if sha256 != None and self.original["sha256"] == None: + if sha256 is not None and self.original["sha256"] is None: self.original["sha256"] = sha256.group(1) self.matchedLines[n] = "sha256" - if patches != None and self.original["patches"] == None: + if patches is not None and self.original["patches"] is None: self.original["patches"] = patches.group(1) self.matchedLines[n] = "patches" @@ -355,7 +355,7 @@ class NixTemplate(object): nixTemplateFile = open(os.path.normpath(self.nixfile),'r') nixOutFile = open(os.path.normpath(nixOut),'w') for (n,line) in enumerate(nixTemplateFile): - if self.matchedLines.has_key(n) and self.update[self.matchedLines[n]] != None: + if self.matchedLines.has_key(n) and self.update[self.matchedLines[n]] is not None: nixOutFile.write(line.replace(self.original[self.matchedLines[n]], self.update[self.matchedLines[n]], 1)) else: nixOutFile.write(line) @@ -383,14 +383,14 @@ class TranslationTable(object): def update(self, key, path, name=None): self.tablePath[key] = path - if name != None: + if name is not None: self.tableName[key] = name def readTable(self, tableFile): with file(tableFile, 'r') as infile: for line in infile: match = re.match(r'^(.+?)\s+(.+?)\s+(.+?)\s*$', line) - if match != None: + if match is not None: if not self.tablePath.has_key(match.group(1)): self.tablePath[match.group(1)] = match.group(2) if not self.tableName.has_key(match.group(1)): @@ -449,7 +449,7 @@ if __name__ == "__main__": nameMap = {} newTable = TranslationTable() - if args.translate != None: + if args.translate is not None: table = TranslationTable() table.readTable(args.translate) newTable.readTable(args.translate) @@ -461,7 +461,7 @@ if __name__ == "__main__": sys.stderr.write("INFO: generate nix file from: %s\n" % specPath) spec = SPECTemplate(specPath, args.output, args.inputSources, args.buildRoot, table, args.repository, allPackagesDir, args.maintainer) - if args.repository != None: + if args.repository is not None: if os.path.exists(os.path.join(spec.potential_repository_dir,'default.nix')): nixTemplate = NixTemplate(os.path.join(spec.potential_repository_dir,'default.nix')) nixTemplate.loadUpdate(spec.facts) @@ -470,12 +470,12 @@ if __name__ == "__main__": nixTemplate.generateUpdated(os.path.join(spec.final_output_dir,'default.nix')) else: sys.stderr.write("WARNING: Repository does not contain template: %s\n" % os.path.join(spec.potential_repository_dir,'default.nix')) - if args.buildRoot == None: + if args.buildRoot is None: spec.generateCombined() else: buildRootContent[spec.key] = spec.generateSplit() else: - if args.buildRoot == None: + if args.buildRoot is None: spec.generateCombined() else: buildRootContent[spec.key] = spec.generateSplit() @@ -486,7 +486,7 @@ if __name__ == "__main__": except Exception, e: sys.stderr.write("ERROR: %s failed with:\n%s\n%s\n" % (specPath,e.message,traceback.format_exc())) - if args.translateOut != None: + if args.translateOut is not None: if not os.path.exists(os.path.dirname(os.path.normpath(args.translateOut))): os.makedirs(os.path.dirname(os.path.normpath(args.translateOut))) newTable.writeTable(args.translateOut) @@ -502,7 +502,7 @@ if __name__ == "__main__": allPackagesFile.write( '\n\n'.join(map(lambda x: x.callPackage(), map(lambda x: nameMap[x], sortedSpecs))) ) allPackagesFile.close() - if args.buildRoot != None: + if args.buildRoot is not None: buildRootFilename = os.path.normpath( args.buildRoot ) if not os.path.exists(os.path.dirname(buildRootFilename)): os.makedirs(os.path.dirname(buildRootFilename)) diff --git a/pkgs/data/fonts/comfortaa/default.nix b/pkgs/data/fonts/comfortaa/default.nix index 0dd4f727ad25..f7ec6e8b8c87 100644 --- a/pkgs/data/fonts/comfortaa/default.nix +++ b/pkgs/data/fonts/comfortaa/default.nix @@ -1,18 +1,18 @@ {stdenv, fetchzip}: let - version = "2.004"; + version = "3.001"; in fetchzip rec { name = "comfortaa-${version}"; - url = "http://openfontlibrary.org/assets/downloads/comfortaa/38318a69b56162733bf82bc0170b7521/comfortaa.zip"; + url = "https://orig00.deviantart.net/40a3/f/2017/093/d/4/comfortaa___font_by_aajohan-d1qr019.zip"; postFetch = '' mkdir -p $out/share/fonts $out/share/doc unzip -l $downloadedFile unzip -j $downloadedFile \*.ttf -d $out/share/fonts/truetype unzip -j $downloadedFile \*/FONTLOG.txt \*/donate.html -d $out/share/doc/${name} ''; - sha256 = "1gnscf3kw9p5gbc5594a22cc6nmiir9mhp1nl3mkbzd4v1jfbh2h"; + sha256 = "0z7xr0cnn6ghwivrm5b5awq9bzhnay3y99qq6dkdgfkfdsaz0n9h"; meta = with stdenv.lib; { homepage = http://aajohan.deviantart.com/art/Comfortaa-font-105395949; diff --git a/pkgs/data/fonts/google-fonts/default.nix b/pkgs/data/fonts/google-fonts/default.nix index 0be58d06fa4d..207f3615d1b4 100644 --- a/pkgs/data/fonts/google-fonts/default.nix +++ b/pkgs/data/fonts/google-fonts/default.nix @@ -37,9 +37,7 @@ stdenv.mkDerivation rec { installPhase = '' dest=$out/share/fonts/truetype - mkdir -p $dest - find . -name "*.ttf" -exec cp -v {} $dest \; - chmod -x $dest/*.ttf + find . -name '*.ttf' -exec install -m 444 -Dt $dest '{}' + ''; meta = with stdenv.lib; { diff --git a/pkgs/data/fonts/ibm-plex/default.nix b/pkgs/data/fonts/ibm-plex/default.nix index ba214dd35fd0..e5a281eebf6e 100644 --- a/pkgs/data/fonts/ibm-plex/default.nix +++ b/pkgs/data/fonts/ibm-plex/default.nix @@ -1,7 +1,7 @@ { lib, fetchzip }: let - version = "1.1.6"; + version = "1.2.1"; in fetchzip rec { name = "ibm-plex-${version}"; url = "https://github.com/IBM/plex/releases/download/v${version}/OpenType.zip"; @@ -9,7 +9,7 @@ in fetchzip rec { mkdir -p $out/share/fonts unzip -j $downloadedFile \*.otf -d $out/share/fonts/opentype ''; - sha256 = "0n9qmh6v7gvrl1mfb0knygxlbkb78hvkdrppssx64m3pk4pxw85a"; + sha256 = "1mwlw39nbqrk08crvgm77l98yyyabwhcgsng89c9s67gq4mlxmxa"; meta = with lib; { description = "IBM Plex Typeface"; diff --git a/pkgs/data/fonts/open-dyslexic/default.nix b/pkgs/data/fonts/open-dyslexic/default.nix index 40a9be3282e0..7fa57463ece3 100644 --- a/pkgs/data/fonts/open-dyslexic/default.nix +++ b/pkgs/data/fonts/open-dyslexic/default.nix @@ -1,11 +1,11 @@ {stdenv, fetchzip}: let - version = "2014-11-11"; + version = "2016-06-23"; in fetchzip { name = "open-dyslexic-${version}"; - url = https://github.com/antijingoist/open-dyslexic/archive/f4b5ba89018b44d633608907e15f93fb3fabbabc.zip; + url = https://github.com/antijingoist/open-dyslexic/archive/20160623-Stable.zip; postFetch = '' mkdir -p $out/share/{doc,fonts} @@ -13,7 +13,7 @@ in fetchzip { unzip -j $downloadedFile \*/README.md -d $out/share/doc/open-dyslexic ''; - sha256 = "045xc7kj56q4ygnjppm8f8fwqqvf21x1piabm4nh8hwgly42a3w2"; + sha256 = "1vl8z5rknh2hpr2f0v4b2qgs5kclx5pzyk8al7243k5db82a2cyi"; meta = with stdenv.lib; { homepage = https://opendyslexic.org/; diff --git a/pkgs/data/fonts/overpass/default.nix b/pkgs/data/fonts/overpass/default.nix index 8bb4e82747ad..c39bb945f48d 100644 --- a/pkgs/data/fonts/overpass/default.nix +++ b/pkgs/data/fonts/overpass/default.nix @@ -1,7 +1,7 @@ { stdenv, fetchzip }: let - version = "3.0.2"; + version = "3.0.3"; in fetchzip rec { name = "overpass-${version}"; @@ -12,7 +12,7 @@ in fetchzip rec { mkdir -p $out/share/doc/${name} ; unzip -j $downloadedFile \*.md -d $out/share/doc/${name} ''; - sha256 = "05zv3zcfc9a707sn3hhf46b126k19d9byzvi5ixp5y2548vjvl6s"; + sha256 = "1m6p7rrlyqikjvypp4698sn0lp3a4z0z5al4swblfhg8qaxzv5pg"; meta = with stdenv.lib; { homepage = http://overpassfont.org/; diff --git a/pkgs/data/misc/hackage/default.nix b/pkgs/data/misc/hackage/default.nix index 0be9abba71d6..5fac16067882 100644 --- a/pkgs/data/misc/hackage/default.nix +++ b/pkgs/data/misc/hackage/default.nix @@ -1,6 +1,6 @@ { fetchurl }: fetchurl { - url = "https://github.com/commercialhaskell/all-cabal-hashes/archive/420a405e4dbccd78b2a471b632b9fe1a1e04502b.tar.gz"; - sha256 = "01vdbp1yh2s0afijz9ap4590mlpiica7l6k0mpfc0jwzymn9w86n"; + url = "https://github.com/commercialhaskell/all-cabal-hashes/archive/98ec0eee2ddef5d4a00e2ac4a95e8add46d23b69.tar.gz"; + sha256 = "0svcaaflqi5c815z3yrh61bjny1jnwp42sylmsnwryjldqvizc1a"; } diff --git a/pkgs/data/misc/wireless-regdb/default.nix b/pkgs/data/misc/wireless-regdb/default.nix index f0ad2c43a9c8..b5293c6d341e 100644 --- a/pkgs/data/misc/wireless-regdb/default.nix +++ b/pkgs/data/misc/wireless-regdb/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "wireless-regdb-${version}"; - version = "2018.09.07"; + version = "2018.10.24"; src = fetchurl { url = "https://www.kernel.org/pub/software/network/wireless-regdb/${name}.tar.xz"; - sha256 = "0nnn10pk94qnrdy55pwcr7506bxdsywa88a3shgqxsd3y53q2sx3"; + sha256 = "05lixkdzy7f3wpan6svh1n9f70rs0kfw6hl6p34sl8bxqxd88ghd"; }; dontBuild = true; diff --git a/pkgs/desktops/deepin/dbus-factory/default.nix b/pkgs/desktops/deepin/dbus-factory/default.nix index 66d28cbcaf3e..610e367b09f8 100644 --- a/pkgs/desktops/deepin/dbus-factory/default.nix +++ b/pkgs/desktops/deepin/dbus-factory/default.nix @@ -18,7 +18,11 @@ stdenv.mkDerivation rec { go-dbus-generator ]; - makeFlags = [ "GOPATH=$(out)/share/gocode" ]; + makeFlags = [ "GOPATH=$(out)/share/go" ]; + + postPatch = '' + sed -i -e 's:/share/gocode:/share/go:' Makefile + ''; meta = with stdenv.lib; { description = "Generates static DBus bindings for Golang and QML at build-time"; diff --git a/pkgs/desktops/deepin/dde-daemon/default.nix b/pkgs/desktops/deepin/dde-daemon/default.nix new file mode 100644 index 000000000000..fe2c5f8f55a1 --- /dev/null +++ b/pkgs/desktops/deepin/dde-daemon/default.nix @@ -0,0 +1,90 @@ +{ stdenv, buildGoPackage, fetchFromGitHub, fetchpatch, pkgconfig, + dbus-factory, go-dbus-factory, go-gir-generator, go-lib, + deepin-gettext-tools, dde-api, alsaLib, glib, gtk3, libinput, libnl, + librsvg, linux-pam, networkmanager, pulseaudio, xorg, gnome3, + python3Packages, hicolor-icon-theme, go }: + +buildGoPackage rec { + name = "${pname}-${version}"; + pname = "dde-daemon"; + version = "3.2.24.7"; + + goPackagePath = "pkg.deepin.io/dde/daemon"; + + src = fetchFromGitHub { + owner = "linuxdeepin"; + repo = pname; + rev = version; + sha256 = "17dvhqrw0dqy3d0wd9ailb18y2rg7575g3ffy0d5rg9m3y65y1y6"; + }; + + patches = [ + # https://github.com/linuxdeepin/dde-daemon/issues/51 + (fetchpatch { + name = "dde-daemon_3.2.3.patch"; + url = https://github.com/jouyouyun/tap-gesture-patches/raw/master/patches/dde-daemon_3.2.3.patch; + sha256 = "0a3xb15czpfl2vajpf7ycw37vr7fbw2png1a67mvjjkgx7d1k7dg"; + }) + ]; + + goDeps = ./deps.nix; + + outputs = [ "out" ]; + + nativeBuildInputs = [ + pkgconfig + dbus-factory + go-dbus-factory + go-gir-generator + go-lib + deepin-gettext-tools + dde-api + linux-pam + networkmanager + networkmanager.dev + python3Packages.python + ]; + + buildInputs = [ + alsaLib + glib + gnome3.libgudev + gtk3 + hicolor-icon-theme + libinput + libnl + librsvg + pulseaudio + ]; + + postPatch = '' + patchShebangs . + + sed -i network/nm_generator/Makefile -e 's,/usr/share/gir-1.0/NM-1.0.gir,${networkmanager.dev}/share/gir-1.0/NM-1.0.gir,' + + sed -i -e "s|{DESTDIR}/etc|{DESTDIR}$out/etc|" Makefile + sed -i -e "s|{DESTDIR}/var|{DESTDIR}$out/var|" Makefile + sed -i -e "s|{DESTDIR}/lib|{DESTDIR}$out/lib|" Makefile + + find -type f -exec sed -i -e "s,/usr/lib/deepin-daemon,$out/lib/deepin-daemon," {} + + ''; + + buildPhase = '' + make -C go/src/${goPackagePath} + # compilation of the nm module is failing + #make -C go/src/${goPackagePath}/network/nm_generator gen-nm-code + ''; + + installPhase = '' + make install PREFIX="$out" -C go/src/${goPackagePath} + remove-references-to -t ${go} $out/lib/deepin-daemon/* + ''; + + meta = with stdenv.lib; { + description = "Daemon for handling Deepin Desktop Environment session settings"; + homepage = https://github.com/linuxdeepin/dde-daemon; + license = licenses.gpl3; + platforms = platforms.linux; + maintainers = with maintainers; [ romildo ]; + }; +} diff --git a/pkgs/desktops/deepin/dde-daemon/deps.nix b/pkgs/desktops/deepin/dde-daemon/deps.nix new file mode 100644 index 000000000000..5ffecc28882d --- /dev/null +++ b/pkgs/desktops/deepin/dde-daemon/deps.nix @@ -0,0 +1,102 @@ +# This file was generated by https://github.com/kamilchm/go2nix v1.2.1 +[ + { + goPackagePath = "github.com/alecthomas/template"; + fetch = { + type = "git"; + url = "https://github.com/alecthomas/template"; + rev = "a0175ee3bccc567396460bf5acd36800cb10c49c"; + sha256 = "0qjgvvh26vk1cyfq9fadyhfgdj36f1iapbmr5xp6zqipldz8ffxj"; + }; + } + { + goPackagePath = "github.com/alecthomas/units"; + fetch = { + type = "git"; + url = "https://github.com/alecthomas/units"; + rev = "2efee857e7cfd4f3d0138cc3cbb1b4966962b93a"; + sha256 = "1j65b91qb9sbrml9cpabfrcf07wmgzzghrl7809hjjhrmbzri5bl"; + }; + } + { + goPackagePath = "github.com/axgle/mahonia"; + fetch = { + type = "git"; + url = "https://github.com/axgle/mahonia"; + rev = "3358181d7394e26beccfae0ffde05193ef3be33a"; + sha256 = "0b8wsrxmv8a0cqbnsg55lpf29pxy2zw8azvgh3ck664lqpcfybhq"; + }; + } + { + goPackagePath = "github.com/cryptix/wav"; + fetch = { + type = "git"; + url = "https://github.com/cryptix/wav"; + rev = "8bdace674401f0bd3b63c65479b6a6ff1f9d5e44"; + sha256 = "18nyqv0ic35fs9fny8sj84c00vbxs8mnric6vr6yl42624fh5id6"; + }; + } + { + goPackagePath = "github.com/linuxdeepin/go-x11-client"; + fetch = { + type = "git"; + url = "https://github.com/linuxdeepin/go-x11-client"; + rev = "8f12fd35ff10b391f0321aa41b94db6acd951ea3"; + sha256 = "1axxzzhbiwvi76d19bix3zm5wv3qmlq0wgji9mwjbmkb4bvp0v3d"; + }; + } + { + goPackagePath = "github.com/msteinert/pam"; + fetch = { + type = "git"; + url = "https://github.com/msteinert/pam"; + rev = "f4cd9f5e29232537a12db1678f48c702ad6896b7"; + sha256 = "1vjawxswy3f23v4d72kk95y3b557580670ai9ffvrwy6wy85qync"; + }; + } + { + goPackagePath = "github.com/nfnt/resize"; + fetch = { + type = "git"; + url = "https://github.com/nfnt/resize"; + rev = "83c6a9932646f83e3267f353373d47347b6036b2"; + sha256 = "005cpiwq28krbjf0zjwpfh63rp4s4is58700idn24fs3g7wdbwya"; + }; + } + { + goPackagePath = "golang.org/x/image"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/image"; + rev = "991ec62608f3c0da01d400756917825d1e2fd528"; + sha256 = "0jipi9czjczi6hlqb5kchgml8r6h6qyb4gqrb0nnb63m25510019"; + }; + } + { + goPackagePath = "golang.org/x/net"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/net"; + rev = "04a2e542c03f1d053ab3e4d6e5abcd4b66e2be8e"; + sha256 = "040i9f6ymj4z25957h20id9kfmlrcp35y4sfd99hngw9li50ihql"; + }; + } + { + goPackagePath = "golang.org/x/text"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/text"; + rev = "4d1c5fb19474adfe9562c9847ba425e7da817e81"; + sha256 = "1y4rf9cmjyf8r56khr1sz0chbq1v0ynaj63i2z1mq6k6h6ww45da"; + }; + } + { + goPackagePath = "gopkg.in/alecthomas/kingpin.v2"; + fetch = { + type = "git"; + url = "https://gopkg.in/alecthomas/kingpin.v2"; + rev = "947dcec5ba9c011838740e680966fd7087a71d0d"; + sha256 = "0mndnv3hdngr3bxp7yxfd47cas4prv98sqw534mx7vp38gd88n5r"; + }; + } +] diff --git a/pkgs/desktops/deepin/deepin-gtk-theme/default.nix b/pkgs/desktops/deepin/deepin-gtk-theme/default.nix index a36a96771904..c46dea2875ad 100644 --- a/pkgs/desktops/deepin/deepin-gtk-theme/default.nix +++ b/pkgs/desktops/deepin/deepin-gtk-theme/default.nix @@ -2,24 +2,24 @@ stdenv.mkDerivation rec { name = "deepin-gtk-theme-${version}"; - version = "17.10.8"; + version = "17.10.9"; src = fetchFromGitHub { owner = "linuxdeepin"; repo = "deepin-gtk-theme"; rev = version; - sha256 = "1z5f5dnda18gixkjcxpvsavhv9m5l2kq61958fdfm1idi0cbr7fp"; + sha256 = "02yn76h007hlmrd7syd82f0mz1c79rlkz3gy1w17zxfy0gdvagz3"; }; propagatedUserEnvPkgs = [ gtk-engine-murrine ]; makeFlags = [ "PREFIX=$(out)" ]; - meta = { + meta = with stdenv.lib; { description = "Deepin GTK Theme"; homepage = https://github.com/linuxdeepin/deepin-gtk-theme; - license = stdenv.lib.licenses.lgpl3; - platforms = stdenv.lib.platforms.unix; - maintainers = [ stdenv.lib.maintainers.romildo ]; + license = licenses.lgpl3; + platforms = platforms.unix; + maintainers = [ maintainers.romildo ]; }; } diff --git a/pkgs/desktops/deepin/default.nix b/pkgs/desktops/deepin/default.nix index 86e5fc37fa54..a6163cd32e20 100644 --- a/pkgs/desktops/deepin/default.nix +++ b/pkgs/desktops/deepin/default.nix @@ -6,6 +6,7 @@ let dbus-factory = callPackage ./dbus-factory { }; dde-api = callPackage ./dde-api { }; dde-calendar = callPackage ./dde-calendar { }; + dde-daemon = callPackage ./dde-daemon { }; dde-polkit-agent = callPackage ./dde-polkit-agent { }; dde-qt-dbus-factory = callPackage ./dde-qt-dbus-factory { }; dde-session-ui = callPackage ./dde-session-ui { }; diff --git a/pkgs/desktops/deepin/go-dbus-factory/default.nix b/pkgs/desktops/deepin/go-dbus-factory/default.nix index a488bd7202cb..b9b3aa59a0b1 100644 --- a/pkgs/desktops/deepin/go-dbus-factory/default.nix +++ b/pkgs/desktops/deepin/go-dbus-factory/default.nix @@ -12,9 +12,11 @@ stdenv.mkDerivation rec { sha256 = "0gj2xxv45gh7wr5ry3mcsi46kdsyq9nbd7znssn34kapiv40ixcx"; }; - makeFlags = [ - "PREFIX=$(out)" - ]; + makeFlags = [ "PREFIX=$(out)" ]; + + postPatch = '' + sed -i -e 's:/share/gocode:/share/go:' Makefile + ''; meta = with stdenv.lib; { description = "GoLang DBus factory for the Deepin Desktop Environment"; diff --git a/pkgs/desktops/deepin/go-dbus-generator/default.nix b/pkgs/desktops/deepin/go-dbus-generator/default.nix index 2933c58f8d95..fa38e650c3a9 100644 --- a/pkgs/desktops/deepin/go-dbus-generator/default.nix +++ b/pkgs/desktops/deepin/go-dbus-generator/default.nix @@ -19,8 +19,7 @@ stdenv.mkDerivation rec { makeFlags = [ "PREFIX=$(out)" - "GOPATH=$(GGOPATH):${go-lib}/share/gocode" - "HOME=$(TMP)" + "GOCACHE=off" ]; meta = with stdenv.lib; { diff --git a/pkgs/desktops/deepin/go-lib/default.nix b/pkgs/desktops/deepin/go-lib/default.nix index 44de8889df28..ff9394425e08 100644 --- a/pkgs/desktops/deepin/go-lib/default.nix +++ b/pkgs/desktops/deepin/go-lib/default.nix @@ -5,13 +5,13 @@ stdenv.mkDerivation rec { name = "${pname}-${version}"; pname = "go-lib"; - version = "1.2.16.1"; + version = "1.2.16.3"; src = fetchFromGitHub { owner = "linuxdeepin"; repo = pname; rev = version; - sha256 = "0nl35dm0bdca38qhnzdpsv6b0vds9ccvm4c86rs42a7c6v655b1q"; + sha256 = "0dk6k53in3ffwwvkr0sazfk83rf4fyc6rvb6k8fi2n3qj4gp8xd2"; }; buildInputs = [ @@ -22,7 +22,10 @@ stdenv.mkDerivation rec { mobile-broadband-provider-info ]; - makeFlags = [ "PREFIX=$(out)" ]; + makeFlags = [ + "PREFIX=$(out)" + "GOSITE_DIR=$(out)/share/go" + ]; meta = with stdenv.lib; { description = "Go bindings for Deepin Desktop Environment development"; diff --git a/pkgs/desktops/gnome-3/core/adwaita-icon-theme/default.nix b/pkgs/desktops/gnome-3/core/adwaita-icon-theme/default.nix index ce596ec628ec..1313527e20f1 100644 --- a/pkgs/desktops/gnome-3/core/adwaita-icon-theme/default.nix +++ b/pkgs/desktops/gnome-3/core/adwaita-icon-theme/default.nix @@ -3,11 +3,11 @@ stdenv.mkDerivation rec { name = "adwaita-icon-theme-${version}"; - version = "3.28.0"; + version = "3.30.0"; src = fetchurl { url = "mirror://gnome/sources/adwaita-icon-theme/${stdenv.lib.versions.majorMinor version}/${name}.tar.xz"; - sha256 = "0l114ildlb3lz3xymfxxi0wpr2x21rd3cg8slb8jyxynzwfqrbks"; + sha256 = "0jz6wiq2yw5jda56jgi1dys7hlvzk1a49xql7lccrrm3fj8p41li"; }; passthru = { diff --git a/pkgs/desktops/gnome-3/core/mutter/default.nix b/pkgs/desktops/gnome-3/core/mutter/default.nix index a08e0fd3cd1a..34830117b777 100644 --- a/pkgs/desktops/gnome-3/core/mutter/default.nix +++ b/pkgs/desktops/gnome-3/core/mutter/default.nix @@ -1,7 +1,7 @@ { fetchurl, stdenv, pkgconfig, gnome3, intltool, gobjectIntrospection, upower, cairo , pango, cogl, clutter, libstartup_notification, zenity, libcanberra-gtk3 , libtool, makeWrapper, xkeyboard_config, libxkbfile, libxkbcommon, libXtst, libinput -, pipewire, libgudev, libwacom, xwayland, autoreconfHook }: +, pipewire, libgudev, libwacom, xwayland, autoreconfHook, fetchpatch }: stdenv.mkDerivation rec { name = "mutter-${version}"; @@ -16,6 +16,14 @@ stdenv.mkDerivation rec { updateScript = gnome3.updateScript { packageName = "mutter"; attrPath = "gnome3.mutter"; }; }; + patches = [ + # https://gitlab.gnome.org/GNOME/mutter/merge_requests/172 + (fetchpatch { + url = https://gitlab.gnome.org/GNOME/mutter/commit/62660bbd.patch; + sha256 = "1qq8vxlqnyrqh94dc0dh1aj1dsbyw6bwv3x46q5vsscbbxbiv9wk"; + }) + ]; + configureFlags = [ "--with-x" "--disable-static" diff --git a/pkgs/desktops/gnustep/libobjc2/default.nix b/pkgs/desktops/gnustep/libobjc2/default.nix index a3e718187c7f..3aba235b3a79 100644 --- a/pkgs/desktops/gnustep/libobjc2/default.nix +++ b/pkgs/desktops/gnustep/libobjc2/default.nix @@ -24,5 +24,6 @@ stdenv.mkDerivation rec { license = licenses.mit; maintainers = with maintainers; [ ashalkhakov matthewbauer ]; platforms = platforms.unix; + badPlatforms = [ "aarch64-linux" ]; }; } diff --git a/pkgs/desktops/maxx/default.nix b/pkgs/desktops/maxx/default.nix index 10fa745d9787..6f515068418e 100644 --- a/pkgs/desktops/maxx/default.nix +++ b/pkgs/desktops/maxx/default.nix @@ -18,11 +18,11 @@ in stdenv.mkDerivation { srcs = [ (fetchurl { - url = "http://maxxinteractive.com/downloads/${version}/FEDORA/MaXX-${version}-NO-ARCH.tar.gz"; + url = "http://maxxdesktop.arcadedaydream.com/Indy-Releases/Installers/MaXX-${version}-NO-ARCH.tar.gz"; sha256 = "1d23j08wwrrn5cp7csv70pcz9jppcn0xb1894wkp0caaliy7g31y"; }) (fetchurl { - url = "http://maxxinteractive.com/downloads/${version}/FEDORA/MaXX-${version}-x86_64.tar.gz"; + url = "http://maxxdesktop.arcadedaydream.com/Indy-Releases/Installers/MaXX-${version}-x86_64.tar.gz"; sha256 = "156p2lra184wyvibrihisd7cr1ivqaygsf0zfm26a12gx23b7708"; }) ]; diff --git a/pkgs/desktops/xfce4-13/xfce4-terminal/default.nix b/pkgs/desktops/xfce4-13/xfce4-terminal/default.nix index 5ee6e338ea4b..6bc88ee76611 100644 --- a/pkgs/desktops/xfce4-13/xfce4-terminal/default.nix +++ b/pkgs/desktops/xfce4-13/xfce4-terminal/default.nix @@ -1,4 +1,4 @@ -{ mkXfceDerivation, gtk3, libxfce4ui, vte }: +{ mkXfceDerivation, gtk3, libxfce4ui, wrapGAppsHook, vte }: mkXfceDerivation rec { category = "apps"; @@ -8,6 +8,7 @@ mkXfceDerivation rec { sha256 = "1s1dq560icg602jjb2ja58x7hxg4ikp3jrrf74v3qgi0ir950k2y"; buildInputs = [ gtk3 libxfce4ui vte ]; + nativeBuildInputs = [ wrapGAppsHook ]; meta = { description = "A modern terminal emulator"; diff --git a/pkgs/development/arduino/platformio/core.nix b/pkgs/development/arduino/platformio/core.nix index de0585309996..5489adc5399d 100644 --- a/pkgs/development/arduino/platformio/core.nix +++ b/pkgs/development/arduino/platformio/core.nix @@ -1,17 +1,57 @@ -{ stdenv, buildPythonPackage, fetchPypi +{ stdenv, lib, buildPythonApplication, fetchFromGitHub , bottle, click, colorama , lockfile, pyserial, requests -, semantic-version +, pytest, semantic-version, tox , git }: -buildPythonPackage rec { +let + args = lib.concatStringsSep " " ((map (e: "--deselect tests/${e}") [ + "commands/test_ci.py::test_ci_boards" + "commands/test_ci.py::test_ci_project_conf" + "commands/test_ci.py::test_ci_lib_and_board" + "commands/test_init.py::test_init_enable_auto_uploading" + "commands/test_init.py::test_init_custom_framework" + "commands/test_init.py::test_init_incorrect_board" + "commands/test_init.py::test_init_ide_atom" + "commands/test_init.py::test_init_ide_eclipse" + "commands/test_init.py::test_init_duplicated_boards" + "commands/test_init.py::test_init_special_board" + "commands/test_lib.py::test_search" + "commands/test_lib.py::test_install_duplicates" + "commands/test_lib.py::test_global_lib_update_check" + "commands/test_lib.py::test_global_lib_update" + "commands/test_lib.py::test_global_lib_uninstall" + "commands/test_lib.py::test_lib_show" + "commands/test_lib.py::test_lib_stats" + "commands/test_lib.py::test_global_install_registry" + "commands/test_lib.py::test_global_install_archive" + "commands/test_lib.py::test_global_install_repository" + "commands/test_lib.py::test_global_lib_list" + "commands/test_test.py::test_local_env" + "test_builder.py::test_build_flags" + "test_builder.py::test_build_unflags" + "test_misc.py::test_api_cache" + "test_misc.py::test_ping_internet_ips" + "test_pkgmanifest.py::test_packages" + ]) ++ (map (e: "--ignore=tests/${e}") [ + "commands/test_boards.py" + "commands/test_platform.py" + "commands/test_update.py" + "test_maintenance.py" + "test_ino2cpp.py" + ])); + +in buildPythonApplication rec { pname = "platformio"; - version = "3.5.3"; + version = "3.6.1"; - src = fetchPypi { - inherit pname version; - sha256 = "1l4s2xh1p9h767amk9zapzivz4irl2y3kff3dna6icvsgq6rz011"; + # pypi tarball doesn't contain tests + src = fetchFromGitHub { + owner = "platformio"; + repo = "platformio-core"; + rev = "v${version}"; + sha256 = "01xz9figqrzb0m9467q14lg51vmgq0hbaap0xdx08n5v2ycmzj0v"; }; propagatedBuildInputs = [ @@ -19,12 +59,25 @@ buildPythonPackage rec { pyserial requests semantic-version ]; + HOME = "/tmp"; + + checkInputs = [ pytest tox ]; + + checkPhase = '' + runHook preCheck + + py.test -v tests ${args} + + runHook postCheck + ''; + patches = [ ./fix-searchpath.patch ]; meta = with stdenv.lib; { + broken = stdenv.isAarch64; description = "An open source ecosystem for IoT development"; homepage = http://platformio.org; - maintainers = with maintainers; [ mog makefu ]; license = licenses.asl20; + maintainers = with maintainers; [ mog makefu ]; }; } diff --git a/pkgs/development/compilers/adoptopenjdk-bin/jdk-darwin-base.nix b/pkgs/development/compilers/adoptopenjdk-bin/jdk-darwin-base.nix new file mode 100644 index 000000000000..c2c13649f885 --- /dev/null +++ b/pkgs/development/compilers/adoptopenjdk-bin/jdk-darwin-base.nix @@ -0,0 +1,59 @@ +{ name +, url +, sha256 +}: + +{ swingSupport ? true # not used for now +, stdenv +, fetchurl +}: + +let result = stdenv.mkDerivation rec { + inherit name; + + src = fetchurl { + inherit url sha256; + }; + + # See: https://github.com/NixOS/patchelf/issues/10 + dontStrip = 1; + + installPhase = '' + cd .. + + mv $sourceRoot $out + + rm -rf $out/Home/demo + + # Remove some broken manpages. + rm -rf $out/Home/man/ja* + + # for backward compatibility + ln -s $out/Contents/Home $out/jre + + ln -s $out/Contents/Home/* $out/ + + mkdir -p $out/nix-support + + # Set JAVA_HOME automatically. + cat <<EOF >> $out/nix-support/setup-hook + if [ -z "\$JAVA_HOME" ]; then export JAVA_HOME=$out; fi + EOF + ''; + + # FIXME: use multiple outputs or return actual JRE package + passthru.jre = result; + + passthru.home = result; + + # for backward compatibility + passthru.architecture = ""; + + meta = with stdenv.lib; { + license = licenses.gpl2Classpath; + description = "AdoptOpenJDK, prebuilt OpenJDK binary"; + platforms = [ "x86_64-darwin" ]; # some inherit jre.meta.platforms + maintainers = with stdenv.lib.maintainers; [ taku0 ]; + }; + +}; in result diff --git a/pkgs/development/compilers/adoptopenjdk-bin/jdk-linux-base.nix b/pkgs/development/compilers/adoptopenjdk-bin/jdk-linux-base.nix new file mode 100644 index 000000000000..cf38ca9eaebe --- /dev/null +++ b/pkgs/development/compilers/adoptopenjdk-bin/jdk-linux-base.nix @@ -0,0 +1,119 @@ +{ name +, url +, sha256 +}: + +{ swingSupport ? true +, stdenv +, fetchurl +, file +, xorg ? null +, glib +, libxml2 +, ffmpeg_2 +, libxslt +, libGL +, freetype +, fontconfig +, gtk2 +, pango +, cairo +, alsaLib +, atk +, gdk_pixbuf +, zlib +, elfutils +}: + +assert swingSupport -> xorg != null; + +let + rSubPaths = [ + "lib/jli" + "lib/server" + "lib/compressedrefs" # OpenJ9 + "lib/j9vm" # OpenJ9 + "lib" + ]; + + libraries = [ + stdenv.cc.libc glib libxml2 ffmpeg_2 libxslt libGL + xorg.libXxf86vm alsaLib fontconfig freetype pango gtk2 cairo gdk_pixbuf + atk zlib elfutils + ] ++ (stdenv.lib.optionals swingSupport [ + xorg.libX11 xorg.libXext xorg.libXtst xorg.libXi xorg.libXp xorg.libXt + xorg.libXrender + stdenv.cc.cc + ]); +in + +let result = stdenv.mkDerivation rec { + inherit name; + + src = fetchurl { + inherit url sha256; + }; + + nativeBuildInputs = [ file ]; + + # See: https://github.com/NixOS/patchelf/issues/10 + dontStrip = 1; + + installPhase = '' + cd .. + + # Set PaX markings + exes=$(file $sourceRoot/bin/* 2> /dev/null | grep -E 'ELF.*(executable|shared object)' | sed -e 's/: .*$//') + for file in $exes; do + paxmark m "$file" + # On x86 for heap sizes over 700MB disable SEGMEXEC and PAGEEXEC as well. + ${stdenv.lib.optionalString stdenv.isi686 ''paxmark msp "$file"''} + done + + mv $sourceRoot $out + + rm -rf $out/demo + + # Remove some broken manpages. + rm -rf $out/man/ja* + + # for backward compatibility + ln -s $out $out/jre + + mkdir -p $out/nix-support + + # Set JAVA_HOME automatically. + cat <<EOF >> $out/nix-support/setup-hook + if [ -z "\$JAVA_HOME" ]; then export JAVA_HOME=$out; fi + EOF + ''; + + postFixup = '' + rpath+="''${rpath:+:}${stdenv.lib.concatStringsSep ":" (map (a: "$out/${a}") rSubPaths)}" + + # set all the dynamic linkers + find $out -type f -perm -0100 \ + -exec patchelf --interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \ + --set-rpath "$rpath" {} \; + + find $out -name "*.so" -exec patchelf --set-rpath "$rpath" {} \; + ''; + + rpath = stdenv.lib.strings.makeLibraryPath libraries; + + # FIXME: use multiple outputs or return actual JRE package + passthru.jre = result; + + passthru.home = result; + + # for backward compatibility + passthru.architecture = ""; + + meta = with stdenv.lib; { + license = licenses.gpl2Classpath; + description = "AdoptOpenJDK, prebuilt OpenJDK binary"; + platforms = [ "x86_64-linux" ]; # some inherit jre.meta.platforms + maintainers = with stdenv.lib.maintainers; [ taku0 ]; + }; + +}; in result diff --git a/pkgs/development/compilers/adoptopenjdk-bin/jdk11-darwin.nix b/pkgs/development/compilers/adoptopenjdk-bin/jdk11-darwin.nix new file mode 100644 index 000000000000..77d9d85aaa93 --- /dev/null +++ b/pkgs/development/compilers/adoptopenjdk-bin/jdk11-darwin.nix @@ -0,0 +1,26 @@ +let + version = "11"; + buildNumber = "28"; + baseUrl = "https://github.com/AdoptOpenJDK/openjdk11-binaries/releases/download/jdk-${version}%2B${buildNumber}"; + makePackage = { packageType, vmType, sha256 }: import ./jdk-darwin-base.nix { + name = if packageType == "jdk" + then + "adoptopenjdk-${vmType}-bin-${version}" + else + "adoptopenjdk-${packageType}-${vmType}-bin-${version}"; + url = "${baseUrl}/OpenJDK${version}-${packageType}_x64_mac_${vmType}_${version}_${buildNumber}.tar.gz"; + inherit sha256; + }; +in +{ + jdk-hotspot = makePackage { + packageType = "jdk"; + vmType = "hotspot"; + sha256 = "ca0ec49548c626904061b491cae0a29b9b4b00fb34d8973dc217e10ab21fb0f3"; + }; + jre-hotspot = makePackage { + packageType = "jre"; + vmType = "hotspot"; + sha256 = "ef4dbfe5aed6ab2278fcc14db6cc73abbaab56e95f6ebb023790a7ebc6d7f30c"; + }; +} diff --git a/pkgs/development/compilers/adoptopenjdk-bin/jdk11-linux.nix b/pkgs/development/compilers/adoptopenjdk-bin/jdk11-linux.nix new file mode 100644 index 000000000000..6e00782c3918 --- /dev/null +++ b/pkgs/development/compilers/adoptopenjdk-bin/jdk11-linux.nix @@ -0,0 +1,36 @@ +let + version = "11"; + buildNumber = "28"; + baseUrl = "https://github.com/AdoptOpenJDK/openjdk11-binaries/releases/download/jdk-${version}%2B${buildNumber}"; + makePackage = { packageType, vmType, sha256 }: import ./jdk-linux-base.nix { + name = if packageType == "jdk" + then + "adoptopenjdk-${vmType}-bin-${version}" + else + "adoptopenjdk-${packageType}-${vmType}-bin-${version}"; + url = "${baseUrl}/OpenJDK${version}-${packageType}_x64_linux_${vmType}_${version}_${buildNumber}.tar.gz"; + inherit sha256; + }; +in +{ + jdk-hotspot = makePackage { + packageType = "jdk"; + vmType = "hotspot"; + sha256 = "e1e18fc9ce2917473da3e0acb5a771bc651f600c0195a3cb40ef6f22f21660af"; + }; + jre-hotspot = makePackage { + packageType = "jre"; + vmType = "hotspot"; + sha256 = "346448142d46c6e51d0fadcaadbcde31251d7678922ec3eb010fcb1b6e17804c"; + }; + jdk-openj9 = makePackage { + packageType = "jdk"; + vmType = "openj9"; + sha256 = "fd77f22eb74078bcf974415abd888296284d2ceb81dbaca6ff32f59416ebc57f"; + }; + jre-openj9 = makePackage { + packageType = "jre"; + vmType = "openj9"; + sha256 = "83a7c95e6b2150a739bdd5e8a6fe0315904fd13d8867c95db67c0318304a2c42"; + }; +} diff --git a/pkgs/development/compilers/closure/default.nix b/pkgs/development/compilers/closure/default.nix index 63b31c60d986..d26f731c21f9 100644 --- a/pkgs/development/compilers/closure/default.nix +++ b/pkgs/development/compilers/closure/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "closure-compiler-${version}"; - version = "20180805"; + version = "20180910"; src = fetchurl { url = "https://dl.google.com/closure-compiler/compiler-${version}.tar.gz"; - sha256 = "1jis9ykbbynq6pa8sl1jy8888l2bk9g4xsiiiab51zn62shqnq26"; + sha256 = "12k4cp9f8g03k3zf2g70pn6ybx8gk0hfh81ypiyb5hkfij95bi9k"; }; sourceRoot = "."; diff --git a/pkgs/development/compilers/crystal/default.nix b/pkgs/development/compilers/crystal/default.nix index 0648a245a4c8..51cea9810bc9 100644 --- a/pkgs/development/compilers/crystal/default.nix +++ b/pkgs/development/compilers/crystal/default.nix @@ -1,6 +1,6 @@ { stdenv, lib, fetchFromGitHub, fetchurl, makeWrapper , gmp, openssl, readline, tzdata, libxml2, libyaml -, boehmgc, libatomic_ops, pcre, libevent, libiconv, llvm, clang, which }: +, boehmgc, libatomic_ops, pcre, libevent, libiconv, llvm, clang, which, zlib }: let binaryVersion = "0.26.0"; @@ -57,7 +57,7 @@ let buildInputs = [ boehmgc libatomic_ops pcre libevent - llvm + llvm zlib openssl ] ++ stdenv.lib.optionals stdenv.isDarwin [ libiconv ]; diff --git a/pkgs/development/compilers/cudatoolkit/default.nix b/pkgs/development/compilers/cudatoolkit/default.nix index e44c21abe946..7a062a552150 100644 --- a/pkgs/development/compilers/cudatoolkit/default.nix +++ b/pkgs/development/compilers/cudatoolkit/default.nix @@ -149,8 +149,7 @@ let }; }; -in { - +in rec { cudatoolkit_6 = common { version = "6.0.37"; url = "http://developer.download.nvidia.com/compute/cuda/6_0/rel/installers/cuda_6.0.37_linux_64.run"; @@ -199,8 +198,8 @@ in { gcc = gcc6; }; - cudatoolkit_9 = common { - version = "9.1.85.1"; + cudatoolkit_9_1 = common { + version = "9.1.85.3"; url = "https://developer.nvidia.com/compute/cuda/9.1/Prod/local_installers/cuda_9.1.85_387.26_linux"; sha256 = "0lz9bwhck1ax4xf1fyb5nicb7l1kssslj518z64iirpy2qmwg5l4"; runPatches = [ @@ -208,9 +207,40 @@ in { url = "https://developer.nvidia.com/compute/cuda/9.1/Prod/patches/1/cuda_9.1.85.1_linux"; sha256 = "1f53ij5nb7g0vb5pcpaqvkaj1x4mfq3l0mhkfnqbk8sfrvby775g"; }) + (fetchurl { + url = "https://developer.nvidia.com/compute/cuda/9.1/Prod/patches/2/cuda_9.1.85.2_linux"; + sha256 = "16g0w09h3bqmas4hy1m0y6j5ffyharslw52fn25gql57bfihg7ym"; + }) + (fetchurl { + url = "https://developer.nvidia.com/compute/cuda/9.1/Prod/patches/3/cuda_9.1.85.3_linux"; + sha256 = "12mcv6f8z33z8y41ja8bv5p5iqhv2vx91mv3b5z6fcj7iqv98422"; + }) ]; gcc = gcc6; }; -} + cudatoolkit_9_2 = common { + version = "9.2.148.1"; + url = "https://developer.nvidia.com/compute/cuda/9.2/Prod2/local_installers/cuda_9.2.148_396.37_linux"; + sha256 = "04c6v9b50l4awsf9w9zj5vnxvmc0hk0ypcfjksbh4vnzrz14wigm"; + runPatches = [ + (fetchurl { + url = "https://developer.nvidia.com/compute/cuda/9.2/Prod2/patches/1/cuda_9.2.148.1_linux"; + sha256 = "1kx6l4yzsamk6q1f4vllcpywhbfr2j5wfl4h5zx8v6dgfpsjm2lw"; + }) + ]; + gcc = gcc6; + }; + + cudatoolkit_9 = cudatoolkit_9_2; + + cudatoolkit_10_0 = common { + version = "10.0.130"; + url = "https://developer.nvidia.com/compute/cuda/10.0/Prod/local_installers/cuda_10.0.130_410.48_linux"; + sha256 = "16p3bv1lwmyqpxil8r951h385sy9asc578afrc7lssa68c71ydcj"; + gcc = gcc6; + }; + + cudatoolkit_10 = cudatoolkit_10_0; +} diff --git a/pkgs/development/compilers/gcc-arm-embedded/6/default.nix b/pkgs/development/compilers/gcc-arm-embedded/6/default.nix deleted file mode 100644 index 945649b29781..000000000000 --- a/pkgs/development/compilers/gcc-arm-embedded/6/default.nix +++ /dev/null @@ -1,45 +0,0 @@ -{ stdenv, fetchurl, ncurses5, python27 }: - -stdenv.mkDerivation rec { - name = "gcc-arm-embedded-${version}"; - version = "6-2017-q2-update"; - subdir = "6-2017q2"; - - platformString = - if stdenv.isLinux then "linux" - else if stdenv.isDarwin then "mac" - else throw "unsupported platform"; - - urlString = "https://developer.arm.com/-/media/Files/downloads/gnu-rm/${subdir}/gcc-arm-none-eabi-${version}-${platformString}.tar.bz2"; - - src = - if stdenv.isLinux then fetchurl { url=urlString; sha256="1hvwi02mx34al525sngnl0cm7dkmzxfkb1brq9kvbv28wcplp3p6"; } - else if stdenv.isDarwin then fetchurl { url=urlString; sha256="0019ylpq4inq7p5gydpmc9m8ni72fz2csrjlqmgx1698998q0c3x"; } - else throw "unsupported platform"; - - phases = [ "unpackPhase" "installPhase" "fixupPhase" ]; - - installPhase = '' - mkdir -p $out - cp -r * $out - ''; - - dontPatchELF = true; - dontStrip = true; - - preFixup = '' - find $out -type f | while read f; do - patchelf $f > /dev/null 2>&1 || continue - patchelf --set-interpreter $(cat ${stdenv.cc}/nix-support/dynamic-linker) "$f" || true - patchelf --set-rpath ${stdenv.lib.makeLibraryPath [ "$out" stdenv.cc.cc ncurses5 python27 ]} "$f" || true - done - ''; - - meta = { - description = "Pre-built GNU toolchain from ARM Cortex-M & Cortex-R processors (Cortex-M0/M0+/M3/M4/M7, Cortex-R4/R5/R7/R8)"; - homepage = https://developer.arm.com/open-source/gnu-toolchain/gnu-rm; - license = with stdenv.lib.licenses; [ bsd2 gpl2 gpl3 lgpl21 lgpl3 mit ]; - maintainers = with stdenv.lib.maintainers; [ vinymeuh ]; - platforms = with stdenv.lib.platforms; linux ++ darwin; - }; -} diff --git a/pkgs/development/compilers/gcc-arm-embedded/7/default.nix b/pkgs/development/compilers/gcc-arm-embedded/7/default.nix deleted file mode 100644 index c22683dae03a..000000000000 --- a/pkgs/development/compilers/gcc-arm-embedded/7/default.nix +++ /dev/null @@ -1,39 +0,0 @@ -{ stdenv, lib, fetchurl, ncurses5, python27 }: - -with lib; - -stdenv.mkDerivation rec { - name = "gcc-arm-embedded-${version}"; - version = "7-2018-q2-update"; - subdir = "7-2018q2"; - - urlString = "https://developer.arm.com/-/media/Files/downloads/gnu-rm/${subdir}/gcc-arm-none-eabi-${version}-linux.tar.bz2"; - - src = fetchurl { url=urlString; sha256="0sgysp3hfpgrkcbfiwkp0a7ymqs02khfbrjabm52b5z61sgi05xv"; }; - - phases = [ "unpackPhase" "installPhase" "fixupPhase" ]; - - installPhase = '' - mkdir -p $out - cp -r * $out - ''; - - dontPatchELF = true; - dontStrip = true; - - preFixup = '' - find $out -type f | while read f; do - patchelf $f > /dev/null 2>&1 || continue - patchelf --set-interpreter $(cat ${stdenv.cc}/nix-support/dynamic-linker) "$f" || true - patchelf --set-rpath ${stdenv.lib.makeLibraryPath [ "$out" stdenv.cc.cc ncurses5 python27 ]} "$f" || true - done - ''; - - meta = { - description = "Pre-built GNU toolchain from ARM Cortex-M & Cortex-R processors (Cortex-M0/M0+/M3/M4/M7, Cortex-R4/R5/R7/R8)"; - homepage = https://developer.arm.com/open-source/gnu-toolchain/gnu-rm; - license = with licenses; [ bsd2 gpl2 gpl3 lgpl21 lgpl3 mit ]; - maintainers = with maintainers; [ prusnak ]; - platforms = platforms.linux; - }; -} diff --git a/pkgs/development/compilers/gcc-arm-embedded/default.nix b/pkgs/development/compilers/gcc-arm-embedded/default.nix deleted file mode 100644 index 039b5a9ce362..000000000000 --- a/pkgs/development/compilers/gcc-arm-embedded/default.nix +++ /dev/null @@ -1,50 +0,0 @@ -{ stdenv, bzip2, patchelf, glibc, gcc, fetchurl, version, releaseType, sha256, ncurses -, dirName ? null, subdirName ? null }: -with stdenv.lib; -let - versionParts = splitString "-" version; # 4.7 2013q3 20130916 - majorVersion = elemAt versionParts 0; # 4.7 - yearQuarter = elemAt versionParts 1; # 2013q3 - underscoreVersion = replaceChars ["."] ["_"] version; # 4_7-2013q3-20130916 - yearQuarterParts = splitString "q" yearQuarter; # 2013 3 - year = elemAt yearQuarterParts 0; # 2013 - quarter = elemAt yearQuarterParts 1; # 3 - dirName_ = if dirName != null then dirName else majorVersion; - subdirName_ = if subdirName != null then subdirName - else "${majorVersion}-${year}-q${quarter}-${releaseType}"; # 4.7-2013-q3-update -in -stdenv.mkDerivation { - name = "gcc-arm-embedded-${version}"; - - src = fetchurl { - url = "https://launchpad.net/gcc-arm-embedded/${dirName_}/${subdirName_}/+download/gcc-arm-none-eabi-${underscoreVersion}-linux.tar.bz2"; - sha256 = sha256; - }; - - nativeBuildInputs = [ bzip2 patchelf ]; - - dontPatchELF = true; - - phases = "unpackPhase patchPhase installPhase"; - - installPhase = '' - mkdir -pv $out - cp -r ./* $out - - for f in $(find $out); do - if [ -f "$f" ] && patchelf "$f" 2> /dev/null; then - patchelf --set-interpreter ${getLib glibc}/lib/ld-linux.so.2 \ - --set-rpath ${stdenv.lib.makeLibraryPath [ "$out" gcc ncurses ]} \ - "$f" || true - fi - done - ''; - - meta = with stdenv.lib; { - description = "Pre-built GNU toolchain from ARM Cortex-M & Cortex-R processors (Cortex-M0/M0+/M3/M4, Cortex-R4/R5/R7)"; - homepage = https://launchpad.net/gcc-arm-embedded; - license = with licenses; [ bsd2 gpl2 gpl3 lgpl21 lgpl3 mit ]; - maintainers = [ maintainers.rasendubi ]; - platforms = platforms.linux; - }; -} diff --git a/pkgs/development/compilers/gcc/4.8/default.nix b/pkgs/development/compilers/gcc/4.8/default.nix index d9376f597a70..e585f296e877 100644 --- a/pkgs/development/compilers/gcc/4.8/default.nix +++ b/pkgs/development/compilers/gcc/4.8/default.nix @@ -130,7 +130,7 @@ let version = "4.8.5"; "--disable-libmpx" # requires libc ] else [ (if crossDarwin then "--with-sysroot=${getLib libcCross}/share/sysroot" - else "--with-headers=${getDev libcCross}/include") + else "--with-headers=${getDev libcCross}${libcCross.incdir or "/include"}") "--enable-__cxa_atexit" "--enable-long-long" ] ++ @@ -148,10 +148,15 @@ let version = "4.8.5"; # In uclibc cases, libgomp needs an additional '-ldl' # and as I don't know how to pass it, I disable libgomp. "--disable-libgomp" - ] ++ [ - "--enable-threads=posix" - "--enable-nls" - "--disable-decimal-float" # No final libdecnumber (it may work only in 386) + ] + ++ optional (targetPlatform.libc == "newlib") "--with-newlib" + ++ optional (targetPlatform.libc == "avrlibc") "--with-avrlibc" + ++ [ + "--enable-threads=${if targetPlatform.isUnix then "posix" + else if targetPlatform.isWindows then "win32" + else "single"}" + "--enable-nls" + "--disable-decimal-float" # No final libdecnumber (it may work only in 386) ])); stageNameAddon = if crossStageStatic then "-stage-static" else "-stage-final"; crossNameAddon = if targetPlatform != hostPlatform then "${targetPlatform.config}${stageNameAddon}-" else ""; @@ -270,7 +275,7 @@ stdenv.mkDerivation ({ }" ] ++ - (if enableMultilib + (if (enableMultilib || targetPlatform.isAvr) then ["--enable-multilib" "--disable-libquadmath"] else ["--disable-multilib"]) ++ optional (!enableShared) "--disable-shared" ++ @@ -360,20 +365,20 @@ stdenv.mkDerivation ({ EXTRA_TARGET_FLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-idirafter ${libcCross.dev}/include" + "-idirafter ${getDev libcCross}${libcCross.incdir or "/include"}" ] ++ optionals (! crossStageStatic) [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ]); EXTRA_TARGET_LDFLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-Wl,-L${libcCross.out}/lib" + "-Wl,-L${libcCross.out}${libcCross.libdir or "/lib"}" ] ++ (if crossStageStatic then [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ] else [ - "-Wl,-rpath,${libcCross.out}/lib" - "-Wl,-rpath-link,${libcCross.out}/lib" + "-Wl,-rpath,${libcCross.out}${libcCross.libdir or "/lib"}" + "-Wl,-rpath-link,${libcCross.out}${libcCross.libdir or "/lib"}" ])); passthru = { diff --git a/pkgs/development/compilers/gcc/4.9/default.nix b/pkgs/development/compilers/gcc/4.9/default.nix index c60f54f1560c..9dae061ecbb3 100644 --- a/pkgs/development/compilers/gcc/4.9/default.nix +++ b/pkgs/development/compilers/gcc/4.9/default.nix @@ -135,7 +135,7 @@ let version = "4.9.4"; "--disable-libmpx" # requires libc ] else [ (if crossDarwin then "--with-sysroot=${getLib libcCross}/share/sysroot" - else "--with-headers=${getDev libcCross}/include") + else "--with-headers=${getDev libcCross}${libcCross.incdir or "/include"}") "--enable-__cxa_atexit" "--enable-long-long" ] ++ @@ -156,10 +156,15 @@ let version = "4.9.4"; # In uclibc cases, libgomp needs an additional '-ldl' # and as I don't know how to pass it, I disable libgomp. "--disable-libgomp" - ] ++ [ - "--enable-threads=posix" - "--enable-nls" - "--disable-decimal-float" # No final libdecnumber (it may work only in 386) + ] + ++ optional (targetPlatform.libc == "newlib") "--with-newlib" + ++ optional (targetPlatform.libc == "avrlibc") "--with-avrlibc" + ++ [ + "--enable-threads=${if targetPlatform.isUnix then "posix" + else if targetPlatform.isWindows then "win32" + else "single"}" + "--enable-nls" + "--disable-decimal-float" # No final libdecnumber (it may work only in 386) ])); stageNameAddon = if crossStageStatic then "-stage-static" else "-stage-final"; crossNameAddon = if targetPlatform != hostPlatform then "${targetPlatform.config}${stageNameAddon}-" else ""; @@ -292,7 +297,7 @@ stdenv.mkDerivation ({ }" ] ++ - (if enableMultilib + (if (enableMultilib || targetPlatform.isAvr) then ["--enable-multilib" "--disable-libquadmath"] else ["--disable-multilib"]) ++ optional (!enableShared) "--disable-shared" ++ @@ -381,20 +386,20 @@ stdenv.mkDerivation ({ EXTRA_TARGET_FLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-idirafter ${getDev libcCross}/include" + "-idirafter ${getDev libcCross}${libcCross.incdir or "/include"}" ] ++ optionals (! crossStageStatic) [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ]); EXTRA_TARGET_LDFLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-Wl,-L${libcCross.out}/lib" + "-Wl,-L${libcCross.out}${libcCross.libdir or "/lib"}" ] ++ (if crossStageStatic then [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ] else [ - "-Wl,-rpath,${libcCross.out}/lib" - "-Wl,-rpath-link,${libcCross.out}/lib" + "-Wl,-rpath,${libcCross.out}${libcCross.libdir or "/lib"}" + "-Wl,-rpath-link,${libcCross.out}${libcCross.libdir or "/lib"}" ])); passthru = diff --git a/pkgs/development/compilers/gcc/5/default.nix b/pkgs/development/compilers/gcc/5/default.nix index 47c849d2dcc8..fbc192752c72 100644 --- a/pkgs/development/compilers/gcc/5/default.nix +++ b/pkgs/development/compilers/gcc/5/default.nix @@ -122,7 +122,7 @@ let version = "5.5.0"; "--disable-libmpx" # requires libc ] else [ (if crossDarwin then "--with-sysroot=${getLib libcCross}/share/sysroot" - else "--with-headers=${getDev libcCross}/include") + else "--with-headers=${getDev libcCross}${libcCross.incdir or "/include"}") "--enable-__cxa_atexit" "--enable-long-long" ] ++ @@ -143,10 +143,15 @@ let version = "5.5.0"; # In uclibc cases, libgomp needs an additional '-ldl' # and as I don't know how to pass it, I disable libgomp. "--disable-libgomp" - ] ++ [ - "--enable-threads=posix" - "--enable-nls" - "--disable-decimal-float" # No final libdecnumber (it may work only in 386) + ] + ++ optional (targetPlatform.libc == "newlib") "--with-newlib" + ++ optional (targetPlatform.libc == "avrlibc") "--with-avrlibc" + ++ [ + "--enable-threads=${if targetPlatform.isUnix then "posix" + else if targetPlatform.isWindows then "win32" + else "single"}" + "--enable-nls" + "--disable-decimal-float" # No final libdecnumber (it may work only in 386) ])); stageNameAddon = if crossStageStatic then "-stage-static" else "-stage-final"; crossNameAddon = if targetPlatform != hostPlatform then "${targetPlatform.config}${stageNameAddon}-" else ""; @@ -296,7 +301,7 @@ stdenv.mkDerivation ({ }" ] ++ - (if enableMultilib + (if (enableMultilib || targetPlatform.isAvr) then ["--enable-multilib" "--disable-libquadmath"] else ["--disable-multilib"]) ++ optional (!enableShared) "--disable-shared" ++ @@ -387,20 +392,20 @@ stdenv.mkDerivation ({ EXTRA_TARGET_FLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-idirafter ${getDev libcCross}/include" + "-idirafter ${getDev libcCross}${libcCross.incdir or "/include"}" ] ++ optionals (! crossStageStatic) [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ]); EXTRA_TARGET_LDFLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-Wl,-L${libcCross.out}/lib" + "-Wl,-L${libcCross.out}${libcCross.libdir or "/lib"}" ] ++ (if crossStageStatic then [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ] else [ - "-Wl,-rpath,${libcCross.out}/lib" - "-Wl,-rpath-link,${libcCross.out}/lib" + "-Wl,-rpath,${libcCross.out}${libcCross.libdir or "/lib"}" + "-Wl,-rpath-link,${libcCross.out}${libcCross.libdir or "/lib"}" ])); passthru = diff --git a/pkgs/development/compilers/gcc/6/default.nix b/pkgs/development/compilers/gcc/6/default.nix index eeb57be97157..793752dee19e 100644 --- a/pkgs/development/compilers/gcc/6/default.nix +++ b/pkgs/development/compilers/gcc/6/default.nix @@ -120,7 +120,7 @@ let version = "6.4.0"; "--disable-libmpx" # requires libc ] else [ (if crossDarwin then "--with-sysroot=${getLib libcCross}/share/sysroot" - else "--with-headers=${getDev libcCross}/include") + else "--with-headers=${getDev libcCross}${libcCross.incdir or "/include"}") "--enable-__cxa_atexit" "--enable-long-long" ] ++ @@ -143,10 +143,15 @@ let version = "6.4.0"; "--disable-libgomp" # musl at least, disable: https://git.buildroot.net/buildroot/commit/?id=873d4019f7fb00f6a80592224236b3ba7d657865 "--disable-libmpx" - ] ++ [ - "--enable-threads=posix" - "--enable-nls" - "--disable-decimal-float" # No final libdecnumber (it may work only in 386) + ] + ++ optional (targetPlatform.libc == "newlib") "--with-newlib" + ++ optional (targetPlatform.libc == "avrlibc") "--with-avrlibc" + ++ [ + "--enable-threads=${if targetPlatform.isUnix then "posix" + else if targetPlatform.isWindows then "win32" + else "single"}" + "--enable-nls" + "--disable-decimal-float" # No final libdecnumber (it may work only in 386) ])); stageNameAddon = if crossStageStatic then "-stage-static" else "-stage-final"; crossNameAddon = if targetPlatform != hostPlatform then "${targetPlatform.config}${stageNameAddon}-" else ""; @@ -301,7 +306,7 @@ stdenv.mkDerivation ({ }" ] ++ - (if enableMultilib + (if (enableMultilib || targetPlatform.isAvr) then ["--enable-multilib" "--disable-libquadmath"] else ["--disable-multilib"]) ++ optional (!enableShared) "--disable-shared" ++ @@ -391,20 +396,20 @@ stdenv.mkDerivation ({ EXTRA_TARGET_FLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-idirafter ${getDev libcCross}/include" + "-idirafter ${getDev libcCross}${libcCross.incdir or "/include"}" ] ++ optionals (! crossStageStatic) [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ]); EXTRA_TARGET_LDFLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-Wl,-L${libcCross.out}/lib" + "-Wl,-L${libcCross.out}${libcCross.libdir or "/lib"}" ] ++ (if crossStageStatic then [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ] else [ - "-Wl,-rpath,${libcCross.out}/lib" - "-Wl,-rpath-link,${libcCross.out}/lib" + "-Wl,-rpath,${libcCross.out}${libcCross.libdir or "/lib"}" + "-Wl,-rpath-link,${libcCross.out}${libcCross.libdir or "/lib"}" ])); passthru = diff --git a/pkgs/development/compilers/gcc/7/default.nix b/pkgs/development/compilers/gcc/7/default.nix index 59897ccff426..c75a6c6e68f8 100644 --- a/pkgs/development/compilers/gcc/7/default.nix +++ b/pkgs/development/compilers/gcc/7/default.nix @@ -67,7 +67,7 @@ let version = "7.3.0"; [ "--with-as=${targetPackages.stdenv.cc.bintools}/bin/${targetPlatform.config}-as" "--with-ld=${targetPackages.stdenv.cc.bintools}/bin/${targetPlatform.config}-ld" ] ++ (if crossMingw && crossStageStatic then [ - "--with-headers=${libcCross}/include" + "--with-headers=${getDev libcCross}${libcCross.incdir or "/include"}" "--with-gcc" "--with-gnu-as" "--with-gnu-ld" @@ -92,7 +92,7 @@ let version = "7.3.0"; "--disable-libmpx" # requires libc ] else [ (if crossDarwin then "--with-sysroot=${getLib libcCross}/share/sysroot" - else "--with-headers=${getDev libcCross}/include") + else "--with-headers=${getDev libcCross}${libcCross.incdir or "/include"}") "--enable-__cxa_atexit" "--enable-long-long" ] ++ @@ -115,11 +115,17 @@ let version = "7.3.0"; "--disable-libgomp" # musl at least, disable: https://git.buildroot.net/buildroot/commit/?id=873d4019f7fb00f6a80592224236b3ba7d657865 "--disable-libmpx" - ] ++ [ - "--enable-threads=posix" - "--enable-nls" - "--disable-decimal-float" # No final libdecnumber (it may work only in 386) - ])); + ] + ++ optional (targetPlatform.libc == "newlib") "--with-newlib" + ++ optional (targetPlatform.libc == "avrlibc") "--with-avrlibc" + ++ [ + "--enable-threads=${if targetPlatform.isUnix then "posix" + else if targetPlatform.isWindows then "win32" + else "single"}" + "--enable-nls" + # No final libdecnumber (it may work only in 386) + "--disable-decimal-float" + ])); stageNameAddon = if crossStageStatic then "-stage-static" else "-stage-final"; crossNameAddon = if targetPlatform != hostPlatform then "${targetPlatform.config}${stageNameAddon}-" else ""; @@ -188,7 +194,12 @@ stdenv.mkDerivation ({ sed -i gcc/config/linux.h -e '1i#undef LOCAL_INCLUDE_DIR' '' ) - else ""); + else "") + + stdenv.lib.optionalString targetPlatform.isAvr '' + makeFlagsArray+=( + 'LIMITS_H_TEST=false' + ) + ''; inherit noSysDirs staticCompiler crossStageStatic libcCross crossMingw; @@ -267,7 +278,7 @@ stdenv.mkDerivation ({ }" ] ++ - (if enableMultilib + (if (enableMultilib || targetPlatform.isAvr) then ["--enable-multilib" "--disable-libquadmath"] else ["--disable-multilib"]) ++ optional (!enableShared) "--disable-shared" ++ @@ -334,20 +345,20 @@ stdenv.mkDerivation ({ EXTRA_TARGET_FLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-idirafter ${getDev libcCross}/include" + "-idirafter ${getDev libcCross}${libcCross.incdir or "/include"}" ] ++ optionals (! crossStageStatic) [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ]); EXTRA_TARGET_LDFLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-Wl,-L${libcCross.out}/lib" + "-Wl,-L${libcCross.out}${libcCross.libdir or "/lib"}" ] ++ (if crossStageStatic then [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ] else [ - "-Wl,-rpath,${libcCross.out}/lib" - "-Wl,-rpath-link,${libcCross.out}/lib" + "-Wl,-rpath,${libcCross.out}${libcCross.libdir or "/lib"}" + "-Wl,-rpath-link,${libcCross.out}${libcCross.libdir or "/lib"}" ])); passthru = diff --git a/pkgs/development/compilers/gcc/8/default.nix b/pkgs/development/compilers/gcc/8/default.nix index 7842110a2146..bcac577712aa 100644 --- a/pkgs/development/compilers/gcc/8/default.nix +++ b/pkgs/development/compilers/gcc/8/default.nix @@ -87,7 +87,7 @@ let version = "8.2.0"; "--disable-libmpx" # requires libc ] else [ (if crossDarwin then "--with-sysroot=${getLib libcCross}/share/sysroot" - else "--with-headers=${getDev libcCross}/include") + else "--with-headers=${getDev libcCross}${libcCross.incdir or "/include"}") "--enable-__cxa_atexit" "--enable-long-long" ] ++ @@ -110,10 +110,15 @@ let version = "8.2.0"; "--disable-libgomp" # musl at least, disable: https://git.buildroot.net/buildroot/commit/?id=873d4019f7fb00f6a80592224236b3ba7d657865 "--disable-libmpx" - ] ++ [ - "--enable-threads=posix" - "--enable-nls" - "--disable-decimal-float" # No final libdecnumber (it may work only in 386) + ] + ++ optional (targetPlatform.libc == "newlib") "--with-newlib" + ++ optional (targetPlatform.libc == "avrlibc") "--with-avrlibc" + ++ [ + "--enable-threads=${if targetPlatform.isUnix then "posix" + else if targetPlatform.isWindows then "win32" + else "single"}" + "--enable-nls" + "--disable-decimal-float" # No final libdecnumber (it may work only in 386) ])); stageNameAddon = if crossStageStatic then "-stage-static" else "-stage-final"; crossNameAddon = if targetPlatform != hostPlatform then "-${targetPlatform.config}" + stageNameAddon else ""; @@ -261,7 +266,7 @@ stdenv.mkDerivation ({ }" ] ++ - (if enableMultilib + (if (enableMultilib || targetPlatform.isAvr) then ["--enable-multilib" "--disable-libquadmath"] else ["--disable-multilib"]) ++ optional (!enableShared) "--disable-shared" ++ @@ -322,23 +327,16 @@ stdenv.mkDerivation ({ LIBRARY_PATH = optionals (targetPlatform == hostPlatform) (makeLibraryPath (optional (zlib != null) zlib)); - EXTRA_TARGET_FLAGS = optionals - (targetPlatform != hostPlatform && libcCross != null) - ([ - "-idirafter ${getDev libcCross}/include" - ] ++ optionals (! crossStageStatic) [ - "-B${libcCross.out}/lib" - ]); EXTRA_TARGET_LDFLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-Wl,-L${libcCross.out}/lib" + "-Wl,-L${libcCross.out}${libcCross.libdir or "/lib"}" ] ++ (if crossStageStatic then [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ] else [ - "-Wl,-rpath,${libcCross.out}/lib" - "-Wl,-rpath-link,${libcCross.out}/lib" + "-Wl,-rpath,${libcCross.out}${libcCross.libdir or "/lib"}" + "-Wl,-rpath-link,${libcCross.out}${libcCross.libdir or "/lib"}" ])); passthru = diff --git a/pkgs/development/compilers/gcc/snapshot/default.nix b/pkgs/development/compilers/gcc/snapshot/default.nix index 0de6be36c351..a308abd9c16f 100644 --- a/pkgs/development/compilers/gcc/snapshot/default.nix +++ b/pkgs/development/compilers/gcc/snapshot/default.nix @@ -104,10 +104,15 @@ let version = "7-20170409"; # In uclibc cases, libgomp needs an additional '-ldl' # and as I don't know how to pass it, I disable libgomp. "--disable-libgomp" - ] ++ [ - "--enable-threads=posix" - "--enable-nls" - "--disable-decimal-float" # No final libdecnumber (it may work only in 386) + ] + ++ optional (targetPlatform.libc == "newlib") "--with-newlib" + ++ optional (targetPlatform.libc == "avrlibc") "--with-avrlibc" + ++ [ + "--enable-threads=${if targetPlatform.isUnix then "posix" + else if targetPlatform.isWindows then "win32" + else "single"}" + "--enable-nls" + "--disable-decimal-float" # No final libdecnumber (it may work only in 386) ])); stageNameAddon = if crossStageStatic then "-stage-static" else "-stage-final"; crossNameAddon = if targetPlatform != hostPlatform then "-${targetPlatform.config}" + stageNameAddon else ""; @@ -290,20 +295,20 @@ stdenv.mkDerivation ({ EXTRA_TARGET_FLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-idirafter ${getDev libcCross}/include" + "-idirafter ${getDev libcCross}${libcCross.incdir or "/include"}" ] ++ optionals (! crossStageStatic) [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ]); EXTRA_TARGET_LDFLAGS = optionals (targetPlatform != hostPlatform && libcCross != null) ([ - "-Wl,-L${libcCross.out}/lib" + "-Wl,-L${libcCross.out}${libcCross.libdir or "/lib"}" ] ++ (if crossStageStatic then [ - "-B${libcCross.out}/lib" + "-B${libcCross.out}${libcCross.libdir or "/lib"}" ] else [ - "-Wl,-rpath,${libcCross.out}/lib" - "-Wl,-rpath-link,${libcCross.out}/lib" + "-Wl,-rpath,${libcCross.out}${libcCross.libdir or "/lib"}" + "-Wl,-rpath-link,${libcCross.out}${libcCross.libdir or "/lib"}" ])); passthru = diff --git a/pkgs/development/compilers/ghc/7.10.3.nix b/pkgs/development/compilers/ghc/7.10.3.nix deleted file mode 100644 index b69ae80d0db5..000000000000 --- a/pkgs/development/compilers/ghc/7.10.3.nix +++ /dev/null @@ -1,194 +0,0 @@ -{ stdenv, targetPackages - -# build-tools -, bootPkgs -, coreutils, fetchurl, perl -, docbook_xsl, docbook_xml_dtd_45, docbook_xml_dtd_42, libxml2, libxslt - -, libiconv ? null, ncurses - -, useLLVM ? !stdenv.targetPlatform.isx86 -, # LLVM is conceptually a run-time-only depedendency, but for - # non-x86, we need LLVM to bootstrap later stages, so it becomes a - # build-time dependency too. - buildLlvmPackages, llvmPackages - -, # If enabled, GHC will be built with the GPL-free but slower integer-simple - # library instead of the faster but GPLed integer-gmp library. - enableIntegerSimple ? !(stdenv.lib.any (stdenv.lib.meta.platformMatch stdenv.hostPlatform) gmp.meta.platforms), gmp - -, # If enabled, use -fPIC when compiling static libs. - enableRelocatedStaticLibs ? stdenv.targetPlatform != stdenv.hostPlatform - -, # Whether to build dynamic libs for the standard library (on the target - # platform). Static libs are always built. - enableShared ? true - -, # What flavour to build. An empty string indicates no - # specific flavour and falls back to ghc default values. - ghcFlavour ? stdenv.lib.optionalString (stdenv.targetPlatform != stdenv.hostPlatform) "perf-cross" -}: - -let - inherit (stdenv) buildPlatform hostPlatform targetPlatform; - - inherit (bootPkgs) ghc; - - # TODO(@Ericson2314) Make unconditional - targetPrefix = stdenv.lib.optionalString - (targetPlatform != hostPlatform) - "${targetPlatform.config}-"; - - docFixes = fetchurl { - url = "https://downloads.haskell.org/~ghc/7.10.3/ghc-7.10.3a.patch"; - sha256 = "1j45z4kcd3w1rzm4hapap2xc16bbh942qnzzdbdjcwqznsccznf0"; - }; - - buildMK = '' - BuildFlavour = ${ghcFlavour} - ifneq \"\$(BuildFlavour)\" \"\" - include mk/flavours/\$(BuildFlavour).mk - endif - DYNAMIC_GHC_PROGRAMS = ${if enableShared then "YES" else "NO"} - '' + stdenv.lib.optionalString enableIntegerSimple '' - INTEGER_LIBRARY = integer-simple - '' + stdenv.lib.optionalString (targetPlatform != hostPlatform) '' - Stage1Only = YES - HADDOCK_DOCS = NO - '' + stdenv.lib.optionalString enableRelocatedStaticLibs '' - GhcLibHcOpts += -fPIC - GhcRtsHcOpts += -fPIC - ''; - - # Splicer will pull out correct variations - libDeps = platform: [ ncurses ] - ++ stdenv.lib.optional (!enableIntegerSimple) gmp - ++ stdenv.lib.optional (platform.libc != "glibc") libiconv; - - toolsForTarget = - if hostPlatform == buildPlatform then - [ targetPackages.stdenv.cc ] ++ stdenv.lib.optional useLLVM llvmPackages.llvm - else assert targetPlatform == hostPlatform; # build != host == target - [ stdenv.cc ] ++ stdenv.lib.optional useLLVM buildLlvmPackages.llvm; - - targetCC = builtins.head toolsForTarget; - -in -stdenv.mkDerivation rec { - version = "7.10.3"; - name = "${targetPrefix}ghc-${version}"; - - src = fetchurl { - url = "https://downloads.haskell.org/~ghc/${version}/ghc-${version}-src.tar.xz"; - sha256 = "1vsgmic8csczl62ciz51iv8nhrkm72lyhbz7p7id13y2w7fcx46g"; - }; - - enableParallelBuilding = true; - - outputs = [ "out" "doc" ]; - - patches = [ - docFixes - ./relocation.patch - ]; - - postPatch = "patchShebangs ."; - - # GHC is a bit confused on its cross terminology. - preConfigure = '' - for env in $(env | grep '^TARGET_' | sed -E 's|\+?=.*||'); do - export "''${env#TARGET_}=''${!env}" - done - # GHC is a bit confused on its cross terminology, as these would normally be - # the *host* tools. - export CC="${targetCC}/bin/${targetCC.targetPrefix}cc" - export CXX="${targetCC}/bin/${targetCC.targetPrefix}cxx" - export LD="${targetCC.bintools}/bin/${targetCC.bintools.targetPrefix}ld" - export AS="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}as" - export AR="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}ar" - export NM="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}nm" - export RANLIB="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}ranlib" - export READELF="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}readelf" - export STRIP="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}strip" - - echo -n "${buildMK}" > mk/build.mk - sed -i -e 's|-isysroot /Developer/SDKs/MacOSX10.5.sdk||' configure - '' + stdenv.lib.optionalString (!stdenv.isDarwin) '' - export NIX_LDFLAGS+=" -rpath $out/lib/ghc-${version}" - '' + stdenv.lib.optionalString stdenv.isDarwin '' - export NIX_LDFLAGS+=" -no_dtrace_dof" - ''; - - # TODO(@Ericson2314): Always pass "--target" and always prefix. - configurePlatforms = [ "build" "host" ] - ++ stdenv.lib.optional (targetPlatform != hostPlatform) "target"; - # `--with` flags for libraries needed for RTS linker - configureFlags = [ - "--datadir=$doc/share/doc/ghc" - "--with-curses-includes=${ncurses.dev}/include" "--with-curses-libraries=${ncurses.out}/lib" - ] ++ stdenv.lib.optional (targetPlatform == hostPlatform && ! enableIntegerSimple) [ - "--with-gmp-includes=${gmp.dev}/include" "--with-gmp-libraries=${gmp.out}/lib" - ] ++ stdenv.lib.optional (targetPlatform == hostPlatform && hostPlatform.libc != "glibc") [ - "--with-iconv-includes=${libiconv}/include" "--with-iconv-libraries=${libiconv}/lib" - ] ++ stdenv.lib.optionals (targetPlatform != hostPlatform) [ - "--enable-bootstrap-with-devel-snapshot" - ] ++ stdenv.lib.optionals (targetPlatform.isDarwin && targetPlatform.isAarch64) [ - # fix for iOS: https://www.reddit.com/r/haskell/comments/4ttdz1/building_an_osxi386_to_iosarm64_cross_compiler/d5qvd67/ - "--disable-large-address-space" - ]; - - # Make sure we never relax`$PATH` and hooks support for compatability. - strictDeps = true; - - nativeBuildInputs = [ - perl libxml2 libxslt docbook_xsl docbook_xml_dtd_45 docbook_xml_dtd_42 - ghc bootPkgs.hscolour - ]; - - # For building runtime libs - depsBuildTarget = toolsForTarget; - - buildInputs = libDeps hostPlatform; - - propagatedBuildInputs = [ targetPackages.stdenv.cc ] - ++ stdenv.lib.optional useLLVM llvmPackages.llvm; - - depsTargetTarget = map stdenv.lib.getDev (libDeps targetPlatform); - depsTargetTargetPropagated = map (stdenv.lib.getOutput "out") (libDeps targetPlatform); - - # required, because otherwise all symbols from HSffi.o are stripped, and - # that in turn causes GHCi to abort - stripDebugFlags = [ "-S" ] ++ stdenv.lib.optional (!targetPlatform.isDarwin) "--keep-file-symbols"; - - hardeningDisable = [ "format" ]; - - postInstall = '' - # Install the bash completion file. - install -D -m 444 utils/completion/ghc.bash $out/share/bash-completion/completions/${targetPrefix}ghc - - # Patch scripts to include "readelf" and "cat" in $PATH. - for i in "$out/bin/"*; do - test ! -h $i || continue - egrep --quiet '^#!' <(head -n 1 $i) || continue - sed -i -e '2i export PATH="$PATH:${stdenv.lib.makeBinPath [ targetPackages.stdenv.cc.bintools coreutils ]}"' $i - done - ''; - - passthru = { - inherit bootPkgs targetPrefix; - - inherit llvmPackages; - inherit enableShared; - - # Our Cabal compiler name - haskellCompilerName = "ghc-7.10.3"; - }; - - meta = { - homepage = http://haskell.org/ghc; - description = "The Glasgow Haskell Compiler"; - maintainers = with stdenv.lib.maintainers; [ marcweber andres peti ]; - inherit (ghc.meta) license platforms; - }; - -} diff --git a/pkgs/development/compilers/ghc/8.0.2.nix b/pkgs/development/compilers/ghc/8.0.2.nix deleted file mode 100644 index f7422d150ac0..000000000000 --- a/pkgs/development/compilers/ghc/8.0.2.nix +++ /dev/null @@ -1,201 +0,0 @@ -{ stdenv, targetPackages - -# build-tools -, bootPkgs -, coreutils, fetchpatch, fetchurl, perl, sphinx - -, libiconv ? null, ncurses - -, useLLVM ? !stdenv.targetPlatform.isx86 -, # LLVM is conceptually a run-time-only depedendency, but for - # non-x86, we need LLVM to bootstrap later stages, so it becomes a - # build-time dependency too. - buildLlvmPackages, llvmPackages - -, # If enabled, GHC will be built with the GPL-free but slower integer-simple - # library instead of the faster but GPLed integer-gmp library. - enableIntegerSimple ? !(stdenv.lib.any (stdenv.lib.meta.platformMatch stdenv.hostPlatform) gmp.meta.platforms), gmp - -, # If enabled, use -fPIC when compiling static libs. - enableRelocatedStaticLibs ? stdenv.targetPlatform != stdenv.hostPlatform - -, # Whether to build dynamic libs for the standard library (on the target - # platform). Static libs are always built. - enableShared ? true - -, # What flavour to build. An empty string indicates no - # specific flavour and falls back to ghc default values. - ghcFlavour ? stdenv.lib.optionalString (stdenv.targetPlatform != stdenv.hostPlatform) "perf-cross" -}: - -assert !enableIntegerSimple -> gmp != null; - -let - inherit (stdenv) buildPlatform hostPlatform targetPlatform; - - inherit (bootPkgs) ghc; - - # TODO(@Ericson2314) Make unconditional - targetPrefix = stdenv.lib.optionalString - (targetPlatform != hostPlatform) - "${targetPlatform.config}-"; - - buildMK = '' - BuildFlavour = ${ghcFlavour} - ifneq \"\$(BuildFlavour)\" \"\" - include mk/flavours/\$(BuildFlavour).mk - endif - DYNAMIC_GHC_PROGRAMS = ${if enableShared then "YES" else "NO"} - INTEGER_LIBRARY = ${if enableIntegerSimple then "integer-simple" else "integer-gmp"} - '' + stdenv.lib.optionalString (targetPlatform != hostPlatform) '' - Stage1Only = YES - HADDOCK_DOCS = NO - '' + stdenv.lib.optionalString enableRelocatedStaticLibs '' - GhcLibHcOpts += -fPIC - GhcRtsHcOpts += -fPIC - ''; - - # Splicer will pull out correct variations - libDeps = platform: [ ncurses ] - ++ stdenv.lib.optional (!enableIntegerSimple) gmp - ++ stdenv.lib.optional (platform.libc != "glibc") libiconv; - - toolsForTarget = - if hostPlatform == buildPlatform then - [ targetPackages.stdenv.cc ] ++ stdenv.lib.optional useLLVM llvmPackages.llvm - else assert targetPlatform == hostPlatform; # build != host == target - [ stdenv.cc ] ++ stdenv.lib.optional useLLVM buildLlvmPackages.llvm; - - targetCC = builtins.head toolsForTarget; - -in -stdenv.mkDerivation rec { - version = "8.0.2"; - name = "${targetPrefix}ghc-${version}"; - - src = fetchurl { - url = "https://downloads.haskell.org/~ghc/${version}/ghc-${version}-src.tar.xz"; - sha256 = "1c8qc4fhkycynk4g1f9hvk53dj6a1vvqi6bklqznns6hw59m8qhi"; - }; - - enableParallelBuilding = true; - - outputs = [ "out" "man" "doc" ]; - - patches = [ - ./ghc-gold-linker.patch - (fetchpatch { # Unreleased 1.24.x commit - url = "https://github.com/haskell/cabal/commit/6394cb0b6eba91a8692a3d04b2b56935aed7cccd.patch"; - sha256 = "14xxjg0nb1j1pw0riac3v385ka92qhxxblfmwyvbghz7kry6axy0"; - stripLen = 1; - extraPrefix = "libraries/Cabal/"; - }) - ] ++ stdenv.lib.optional stdenv.isLinux ./ghc-no-madv-free.patch - ++ stdenv.lib.optional stdenv.isDarwin ./ghc-8.0.2-no-cpp-warnings.patch - ++ stdenv.lib.optional stdenv.isDarwin ./backport-dylib-command-size-limit.patch; - - postPatch = "patchShebangs ."; - - # GHC is a bit confused on its cross terminology. - preConfigure = '' - for env in $(env | grep '^TARGET_' | sed -E 's|\+?=.*||'); do - export "''${env#TARGET_}=''${!env}" - done - # GHC is a bit confused on its cross terminology, as these would normally be - # the *host* tools. - export CC="${targetCC}/bin/${targetCC.targetPrefix}cc" - export CXX="${targetCC}/bin/${targetCC.targetPrefix}cxx" - export LD="${targetCC.bintools}/bin/${targetCC.bintools.targetPrefix}ld" - export AS="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}as" - export AR="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}ar" - export NM="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}nm" - export RANLIB="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}ranlib" - export READELF="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}readelf" - export STRIP="${targetCC.bintools.bintools}/bin/${targetCC.bintools.targetPrefix}strip" - - echo -n "${buildMK}" > mk/build.mk - sed -i -e 's|-isysroot /Developer/SDKs/MacOSX10.5.sdk||' configure - '' + stdenv.lib.optionalString (!stdenv.isDarwin) '' - export NIX_LDFLAGS+=" -rpath $out/lib/ghc-${version}" - '' + stdenv.lib.optionalString stdenv.isDarwin '' - export NIX_LDFLAGS+=" -no_dtrace_dof" - ''; - - # TODO(@Ericson2314): Always pass "--target" and always prefix. - configurePlatforms = [ "build" "host" ] - ++ stdenv.lib.optional (targetPlatform != hostPlatform) "target"; - # `--with` flags for libraries needed for RTS linker - configureFlags = [ - "--datadir=$doc/share/doc/ghc" - "--with-curses-includes=${ncurses.dev}/include" "--with-curses-libraries=${ncurses.out}/lib" - ] ++ stdenv.lib.optional (targetPlatform == hostPlatform && ! enableIntegerSimple) [ - "--with-gmp-includes=${targetPackages.gmp.dev}/include" "--with-gmp-libraries=${targetPackages.gmp.out}/lib" - ] ++ stdenv.lib.optional (targetPlatform == hostPlatform && hostPlatform.libc != "glibc") [ - "--with-iconv-includes=${libiconv}/include" "--with-iconv-libraries=${libiconv}/lib" - ] ++ stdenv.lib.optionals (targetPlatform != hostPlatform) [ - "--enable-bootstrap-with-devel-snapshot" - ] ++ stdenv.lib.optionals (targetPlatform.isDarwin && targetPlatform.isAarch64) [ - # fix for iOS: https://www.reddit.com/r/haskell/comments/4ttdz1/building_an_osxi386_to_iosarm64_cross_compiler/d5qvd67/ - "--disable-large-address-space" - ]; - - # Make sure we never relax`$PATH` and hooks support for compatability. - strictDeps = true; - - nativeBuildInputs = [ - perl sphinx - ghc bootPkgs.hscolour - ]; - - # For building runtime libs - depsBuildTarget = toolsForTarget; - - buildInputs = libDeps hostPlatform; - - propagatedBuildInputs = [ targetPackages.stdenv.cc ] - ++ stdenv.lib.optional useLLVM llvmPackages.llvm; - - depsTargetTarget = map stdenv.lib.getDev (libDeps targetPlatform); - depsTargetTargetPropagated = map (stdenv.lib.getOutput "out") (libDeps targetPlatform); - - # required, because otherwise all symbols from HSffi.o are stripped, and - # that in turn causes GHCi to abort - stripDebugFlags = [ "-S" ] ++ stdenv.lib.optional (!targetPlatform.isDarwin) "--keep-file-symbols"; - - hardeningDisable = [ "format" ]; - - postInstall = '' - for bin in "$out"/lib/${name}/bin/*; do - isELF "$bin" || continue - paxmark m "$bin" - done - - # Install the bash completion file. - install -D -m 444 utils/completion/ghc.bash $out/share/bash-completion/completions/${targetPrefix}ghc - - # Patch scripts to include "readelf" and "cat" in $PATH. - for i in "$out/bin/"*; do - test ! -h $i || continue - egrep --quiet '^#!' <(head -n 1 $i) || continue - sed -i -e '2i export PATH="$PATH:${stdenv.lib.makeBinPath [ targetPackages.stdenv.cc.bintools coreutils ]}"' $i - done - ''; - - passthru = { - inherit bootPkgs targetPrefix; - - inherit llvmPackages; - inherit enableShared; - - # Our Cabal compiler name - haskellCompilerName = "ghc-8.0.2"; - }; - - meta = { - homepage = http://haskell.org/ghc; - description = "The Glasgow Haskell Compiler"; - maintainers = with stdenv.lib.maintainers; [ marcweber andres peti ]; - inherit (ghc.meta) license platforms; - }; - -} diff --git a/pkgs/development/compilers/ghc/8.2.1-binary.nix b/pkgs/development/compilers/ghc/8.2.1-binary.nix index 6caeaf20f64c..626c0d8ca9c2 100644 --- a/pkgs/development/compilers/ghc/8.2.1-binary.nix +++ b/pkgs/development/compilers/ghc/8.2.1-binary.nix @@ -75,6 +75,7 @@ stdenv.mkDerivation rec { # Some scripts used during the build need to have their shebangs patched '' patchShebangs ghc-${version}/utils/ + patchShebangs ghc-${version}/configure '' + # Strip is harmful, see also below. It's important that this happens diff --git a/pkgs/development/compilers/ghc/8.4.3.nix b/pkgs/development/compilers/ghc/8.6.2.nix index e43f9a57d0a4..6470f7b02957 100644 --- a/pkgs/development/compilers/ghc/8.4.3.nix +++ b/pkgs/development/compilers/ghc/8.6.2.nix @@ -29,10 +29,6 @@ , # What flavour to build. An empty string indicates no # specific flavour and falls back to ghc default values. ghcFlavour ? stdenv.lib.optionalString (stdenv.targetPlatform != stdenv.hostPlatform) "perf-cross" -, # Whether to backport https://phabricator.haskell.org/D4388 for - # deterministic profiling symbol names, at the cost of a slightly - # non-standard GHC API - deterministicProfiling ? false }: assert !enableIntegerSimple -> gmp != null; @@ -82,34 +78,23 @@ let in stdenv.mkDerivation (rec { - version = "8.4.3"; + version = "8.6.2"; name = "${targetPrefix}ghc-${version}"; src = fetchurl { url = "https://downloads.haskell.org/~ghc/${version}/ghc-${version}-src.tar.xz"; - sha256 = "1mk046vb561j75saz05rghhbkps46ym5aci4264dwc2qk3dayixf"; + sha256 = "1mbn3n2ynmpfpb7jfnhpzzli31qqxqyi8ws71blws3i846fq3ana"; }; enableParallelBuilding = true; outputs = [ "out" "doc" ]; - patches = [(fetchpatch { - url = "https://git.haskell.org/hsc2hs.git/patch/738f3666c878ee9e79c3d5e819ef8b3460288edf"; - sha256 = "0plzsbfaq6vb1023lsarrjglwgr9chld4q3m99rcfzx0yx5mibp3"; - extraPrefix = "utils/hsc2hs/"; - stripLen = 1; - }) (fetchpatch rec { # https://phabricator.haskell.org/D5123 + patches = [(fetchpatch rec { # https://phabricator.haskell.org/D5123 url = "http://tarballs.nixos.org/sha256/${sha256}"; name = "D5123.diff"; sha256 = "0nhqwdamf2y4gbwqxcgjxs0kqx23w9gv5kj0zv6450dq19rji82n"; - })] ++ stdenv.lib.optional deterministicProfiling - (fetchpatch rec { - url = "http://tarballs.nixos.org/sha256/${sha256}"; - name = "D4388.diff"; - sha256 = "0w6sdcvnqjlnlzpvnzw20b80v150ijjyjvs9548ildc1928j0w7s"; - }) - ++ stdenv.lib.optional stdenv.isDarwin ./backport-dylib-command-size-limit.patch; + })]; postPatch = "patchShebangs ."; @@ -230,7 +215,7 @@ stdenv.mkDerivation (rec { inherit enableShared; # Our Cabal compiler name - haskellCompilerName = "ghc-8.4.3"; + haskellCompilerName = "ghc-8.6.2"; }; meta = { diff --git a/pkgs/development/compilers/ghc/ghc-8.0.2-no-cpp-warnings.patch b/pkgs/development/compilers/ghc/ghc-8.0.2-no-cpp-warnings.patch deleted file mode 100644 index 90224df19f61..000000000000 --- a/pkgs/development/compilers/ghc/ghc-8.0.2-no-cpp-warnings.patch +++ /dev/null @@ -1,23 +0,0 @@ ---- b/includes/rts/storage/ClosureMacros.h 2017-05-21 12:54:09.000000000 +0200 -+++ a/includes/rts/storage/ClosureMacros.h 2017-05-21 12:55:57.000000000 +0200 -@@ -499,8 +499,17 @@ - - -------------------------------------------------------------------------- */ - --#define ZERO_SLOP_FOR_LDV_PROF (defined(PROFILING)) --#define ZERO_SLOP_FOR_SANITY_CHECK (defined(DEBUG) && !defined(THREADED_RTS)) -+#if defined(PROFILING) -+#define ZERO_SLOP_FOR_LDV_PROF 1 -+#else -+#define ZERO_SLOP_FOR_LDV_PROF 0 -+#endif -+ -+#if defined(DEBUG) && !defined(THREADED_RTS) -+#define ZERO_SLOP_FOR_SANITY_CHECK 1 -+#else -+#define ZERO_SLOP_FOR_SANITY_CHECK 0 -+#endif - - #if ZERO_SLOP_FOR_LDV_PROF || ZERO_SLOP_FOR_SANITY_CHECK - #define OVERWRITING_CLOSURE(c) overwritingClosure(c) - diff --git a/pkgs/development/compilers/ghc/ghc-gold-linker.patch b/pkgs/development/compilers/ghc/ghc-gold-linker.patch deleted file mode 100644 index edce7ef3a178..000000000000 --- a/pkgs/development/compilers/ghc/ghc-gold-linker.patch +++ /dev/null @@ -1,54 +0,0 @@ -From 46fe80ab7c0013a929d0934e61429820042a70a9 Mon Sep 17 00:00:00 2001 -From: =?UTF-8?q?Niklas=20Hamb=C3=BCchen?= <mail@nh2.me> -Date: Fri, 21 Jul 2017 20:09:11 +0200 -Subject: [PATCH 1/2] base: Add `extra-libraries: m` because base uses libm - functions. - -Linking with gold needs this because in contrast to ld, gold -doesn't implicitly link libm. - -Found by Michael Bishop <cleverca22@gmail.com>. ---- - libraries/base/base.cabal | 4 ++++ - 1 file changed, 4 insertions(+) - -diff --git a/libraries/base/base.cabal b/libraries/base/base.cabal -index f00fb8768e5..fd91f268ffe 100644 ---- a/libraries/base/base.cabal -+++ b/libraries/base/base.cabal -@@ -342,6 +342,10 @@ Library - WCsubst.h - consUtils.h - -+ -- Base uses libm functions. ld.bfd links libm implicitly when necessary. -+ -- Other linkers, like gold, don't, so we have to declare it explicitly. -+ extra-libraries: m -+ - -- OS Specific - if os(windows) - -- Windows requires some extra libraries for linking because the RTS - -From 900a8f4931e9bc6d3219d9263cfecfc6af8fc766 Mon Sep 17 00:00:00 2001 -From: michael bishop <cleverca22@gmail.com> -Date: Sat, 22 Jul 2017 13:12:39 -0300 -Subject: [PATCH 2/2] also add -lm to ghc-prim - ---- - libraries/ghc-prim/ghc-prim.cabal | 4 ++++ - 1 file changed, 4 insertions(+) - -diff --git a/libraries/ghc-prim/ghc-prim.cabal b/libraries/ghc-prim/ghc-prim.cabal -index 00a029efedf..6db85dd69fc 100644 ---- a/libraries/ghc-prim/ghc-prim.cabal -+++ b/libraries/ghc-prim/ghc-prim.cabal -@@ -42,6 +42,10 @@ Library - UnliftedFFITypes - - build-depends: rts == 1.0.* -+ -+ -- Base uses libm functions. ld.bfd links libm implicitly when necessary. -+ -- Other linkers, like gold, don't, so we have to declare it explicitly. -+ extra-libraries: m - - exposed-modules: - GHC.CString diff --git a/pkgs/development/compilers/ghc/ghc-no-madv-free.patch b/pkgs/development/compilers/ghc/ghc-no-madv-free.patch deleted file mode 100644 index 8fea9f920126..000000000000 --- a/pkgs/development/compilers/ghc/ghc-no-madv-free.patch +++ /dev/null @@ -1,18 +0,0 @@ -diff --git a/rts/posix/OSMem.c b/rts/posix/OSMem.c -index 99620ee..e052a84 100644 ---- a/rts/posix/OSMem.c -+++ b/rts/posix/OSMem.c -@@ -523,13 +523,7 @@ void osDecommitMemory(void *at, W_ size) - sysErrorBelch("unable to make released memory unaccessible"); - #endif - --#ifdef MADV_FREE -- // Try MADV_FREE first, FreeBSD has both and MADV_DONTNEED -- // just swaps memory out -- r = madvise(at, size, MADV_FREE); --#else - r = madvise(at, size, MADV_DONTNEED); --#endif - if(r < 0) - sysErrorBelch("unable to decommit memory"); - } diff --git a/pkgs/development/compilers/ghc/relocation.patch b/pkgs/development/compilers/ghc/relocation.patch deleted file mode 100644 index b9becfc86b54..000000000000 --- a/pkgs/development/compilers/ghc/relocation.patch +++ /dev/null @@ -1,27 +0,0 @@ -Adding support for the R_X86_64_REX_GOTPCRELX relocation type. -This relocation is treated by the linker the same as the R_X86_64_GOTPCRELX type -G + GOT + A - P to generate relative offsets to the GOT. -The REX prefix has no influence in this stage. - -This caused breakage when enabling relro/bindnow hardening e.g. in ghcPaclages.vector - -Source: https://phabricator.haskell.org/D2303#67070 -diff --git a/rts/Linker.c b/rts/Linker.c ---- a/rts/Linker.c -+++ b/rts/Linker.c -@@ -5681,7 +5681,13 @@ - *(Elf64_Sword *)P = (Elf64_Sword)value; - #endif - break; -- -+/* These two relocations were introduced in glibc 2.23 and binutils 2.26. -+ But in order to use them the system which compiles the bindist for GHC needs -+ to have glibc >= 2.23. So only use them if they're defined. */ -+#if defined(R_X86_64_REX_GOTPCRELX) && defined(R_X86_64_GOTPCRELX) -+ case R_X86_64_REX_GOTPCRELX: -+ case R_X86_64_GOTPCRELX: -+#endif - case R_X86_64_GOTPCREL: - { - StgInt64 gotAddress = (StgInt64) &makeSymbolExtra(oc, ELF_R_SYM(info), S)->addr; - diff --git a/pkgs/development/compilers/ghcjs/7.10/boot.patch b/pkgs/development/compilers/ghcjs/7.10/boot.patch deleted file mode 100644 index 9f4fa3a8b7ae..000000000000 --- a/pkgs/development/compilers/ghcjs/7.10/boot.patch +++ /dev/null @@ -1,104 +0,0 @@ -diff --git a/src-bin/Boot.hs b/src-bin/Boot.hs -index db8b12e..7b815c5 100644 ---- a/src-bin/Boot.hs -+++ b/src-bin/Boot.hs -@@ -540,9 +540,7 @@ initPackageDB :: B () - initPackageDB = do - msg info "creating package databases" - initDB "--global" <^> beLocations . blGlobalDB -- traverseOf_ _Just initUser <^> beLocations . blUserDBDir - where -- initUser dir = rm_f (dir </> "package.conf") >> initDB "--user" (dir </> "package.conf.d") - initDB dbName db = do - rm_rf db >> mkdir_p db - ghcjs_pkg_ ["init", toTextI db] `catchAny_` return () -@@ -566,29 +564,22 @@ installDevelopmentTree = subTop $ do - msgD info $ "preparing development boot tree" - checkpoint' "ghcjs-boot-git" "ghcjs-boot repository already cloned and prepared" $ do - testGit "ghcjs-boot" >>= \case -- Just False -> failWith "ghcjs-boot already exists and is not a git repository" -- Just True -> do -- msg info "ghcjs-boot repository already exists but checkpoint not reached, cleaning first, then cloning" -- rm_rf "ghcjs-boot" -+ Just _ -> do -+ msg info "ghcjs-boot repository already exists; initializing ghcjs-boot" - initGhcjsBoot - Nothing -> do - msgD info "cloning ghcjs-boot git repository" - initGhcjsBoot - checkpoint' "shims-git" "shims repository already cloned" $ do - testGit "shims" >>= \case -- Just False -> failWith "shims already exists and is not a git repository" -- Just True -> do -- msgD info "shims repository already exists but checkpoint not reached, cleaning first, then cloning" -- rm_rf "shims" -- cloneGit shimsDescr "shims" bsrcShimsDevBranch bsrcShimsDev -+ Just _ -> do -+ msgD info "shims repository already exists; moving on" - Nothing -> do - msgD info "cloning shims git repository" - cloneGit shimsDescr "shims" bsrcShimsDevBranch bsrcShimsDev - where - initGhcjsBoot = sub $ do -- cloneGit bootDescr "ghcjs-boot" bsrcBootDevBranch bsrcBootDev - cd "ghcjs-boot" -- git_ ["submodule", "update", "--init", "--recursive"] - mapM_ patchPackage =<< allPackages - preparePrimops - buildGenPrim -@@ -1141,7 +1132,7 @@ cabalStage1 pkgs = sub $ do - globalFlags <- cabalGlobalFlags - flags <- cabalInstallFlags (length pkgs == 1) - let args = globalFlags ++ ("install" : pkgs) ++ -- [ "--solver=topdown" -- the modular solver refuses to install stage1 packages -+ [ "--allow-boot-library-installs" - ] ++ map ("--configure-option="<>) configureOpts ++ flags - checkInstallPlan pkgs args - cabal_ args -@@ -1162,7 +1153,7 @@ cabalInstall pkgs = do - -- uses somewhat fragile parsing of --dry-run output, find a better way - checkInstallPlan :: [Package] -> [Text] -> B () - checkInstallPlan pkgs opts = do -- plan <- cabal (opts ++ ["-v2", "--dry-run"]) -+ plan <- cabal (opts ++ ["-vverbose+nowrap", "--dry-run"]) - when (hasReinstalls plan || hasUnexpectedInstalls plan || hasNewVersion plan) (err plan) - where - hasReinstalls = T.isInfixOf "(reinstall)" -- reject reinstalls -@@ -1201,14 +1192,14 @@ cabalInstallFlags parmakeGhcjs = do - , "--avoid-reinstalls" - , "--builddir", "dist" - , "--with-compiler", ghcjs ^. pgmLocText -+ , "--with-gcc", "@CC@" - , "--with-hc-pkg", ghcjsPkg ^. pgmLocText -- , "--prefix", toTextI instDir -+ , "--prefix", "@PREFIX@" -+ , "--libdir", "$prefix/lib/$compiler" -+ , "--libsubdir", "$pkgid" - , bool haddock "--enable-documentation" "--disable-documentation" - , "--haddock-html" ---- workaround for hoogle support being broken in haddock for GHC 7.10RC1 --#if !(__GLASGOW_HASKELL__ >= 709) - , "--haddock-hoogle" --#endif - , "--haddock-hyperlink-source" - -- don't slow down Windows builds too much, on other platforms we get this more - -- or less for free, thanks to dynamic-too -diff --git a/src/Compiler/Info.hs b/src/Compiler/Info.hs -index 33a401f..e2405a7 100644 ---- a/src/Compiler/Info.hs -+++ b/src/Compiler/Info.hs -@@ -48,13 +48,7 @@ compilerInfo nativeToo dflags = do - - -- | the directory to use if started without -B flag - getDefaultTopDir :: IO FilePath --getDefaultTopDir = do -- appdir <- getAppUserDataDirectory "ghcjs" -- return (appdir </> subdir </> "ghcjs") -- where -- targetARCH = arch -- targetOS = os -- subdir = targetARCH ++ '-':targetOS ++ '-':getFullCompilerVersion -+getDefaultTopDir = return "@PREFIX@/lib/ghcjs-@VERSION@" - - getDefaultLibDir :: IO FilePath - getDefaultLibDir = getDefaultTopDir diff --git a/pkgs/development/compilers/ghcjs/7.10/default.nix b/pkgs/development/compilers/ghcjs/7.10/default.nix deleted file mode 100644 index f18a094aa3cf..000000000000 --- a/pkgs/development/compilers/ghcjs/7.10/default.nix +++ /dev/null @@ -1,50 +0,0 @@ -{ fetchgit, fetchFromGitHub, bootPkgs, cabal-install }: - -bootPkgs.callPackage ../base.nix { - version = "0.2.0"; - - inherit bootPkgs cabal-install; - - ghcjsSrc = fetchFromGitHub { - owner = "ghcjs"; - repo = "ghcjs"; - rev = "689c7753f50353dd05606ed79c51cd5a94d3922a"; - sha256 = "076020a9gjv8ldj5ckm43sbzq9s6c5xj6lpd8v28ybpiama3m6b4"; - }; - ghcjsBootSrc = fetchgit { - url = git://github.com/ghcjs/ghcjs-boot.git; - rev = "8c549931da27ba9e607f77195208ec156c840c8a"; - sha256 = "0yg9bnabja39qysh9pg1335qbvbc0r2mdw6cky94p7kavacndfdv"; - fetchSubmodules = true; - }; - - shims = import ./shims.nix { inherit fetchFromGitHub; }; - stage1Packages = [ - "array" - "base" - "binary" - "bytestring" - "containers" - "deepseq" - "directory" - "filepath" - "ghc-boot" - "ghc-boot-th" - "ghc-prim" - "ghci" - "ghcjs-prim" - "ghcjs-th" - "integer-gmp" - "pretty" - "primitive" - "process" - "rts" - "template-haskell" - "time" - "transformers" - "unix" - ]; - stage2 = import ./stage2.nix; - - patches = [ ./boot.patch ]; -} diff --git a/pkgs/development/compilers/ghcjs/7.10/shims.nix b/pkgs/development/compilers/ghcjs/7.10/shims.nix deleted file mode 100644 index fa706699449a..000000000000 --- a/pkgs/development/compilers/ghcjs/7.10/shims.nix +++ /dev/null @@ -1,7 +0,0 @@ -{ fetchFromGitHub }: -fetchFromGitHub { - owner = "ghcjs"; - repo = "shims"; - rev = "b97015229c58eeab7c1d0bb575794b14a9f6efca"; - sha256 = "1p5adkqvmb1gsv9hnn3if0rdpnaq3v9a1zkfdy282yw05jaaaggz"; -} diff --git a/pkgs/development/compilers/ghcjs/7.10/stage2.nix b/pkgs/development/compilers/ghcjs/7.10/stage2.nix deleted file mode 100644 index 3483afc99ef0..000000000000 --- a/pkgs/development/compilers/ghcjs/7.10/stage2.nix +++ /dev/null @@ -1,344 +0,0 @@ -{ ghcjsBoot }: { callPackage }: - -{ - async = callPackage - ({ mkDerivation, base, HUnit, stdenv, stm, test-framework - , test-framework-hunit - }: - mkDerivation { - pname = "async"; - version = "2.0.1.6"; - src = "${ghcjsBoot}/boot/async"; - doCheck = false; - libraryHaskellDepends = [ base stm ]; - testHaskellDepends = [ - base HUnit test-framework test-framework-hunit - ]; - jailbreak = true; - homepage = https://github.com/simonmar/async; - description = "Run IO operations asynchronously and wait for their results"; - license = stdenv.lib.licenses.bsd3; - }) {}; - aeson = callPackage - ({ mkDerivation, attoparsec, base, bytestring, containers, deepseq - , dlist, ghc-prim, hashable, HUnit, mtl, QuickCheck, scientific - , stdenv, syb, template-haskell, test-framework - , test-framework-hunit, test-framework-quickcheck2, text, time - , transformers, unordered-containers, vector - }: - mkDerivation { - pname = "aeson"; - version = "0.9.0.1"; - src = "${ghcjsBoot}/boot/aeson"; - doCheck = false; - libraryHaskellDepends = [ - attoparsec base bytestring containers deepseq dlist ghc-prim - hashable mtl scientific syb template-haskell text time transformers - unordered-containers vector - ]; - testHaskellDepends = [ - attoparsec base bytestring containers ghc-prim HUnit QuickCheck - template-haskell test-framework test-framework-hunit - test-framework-quickcheck2 text time unordered-containers vector - ]; - jailbreak = true; - homepage = https://github.com/bos/aeson; - description = "Fast JSON parsing and encoding"; - license = stdenv.lib.licenses.bsd3; - }) {}; - attoparsec = callPackage - ({ mkDerivation, array, base, bytestring, containers, deepseq - , QuickCheck, quickcheck-unicode, scientific, stdenv - , test-framework, test-framework-quickcheck2, text, transformers - , vector - }: - mkDerivation { - pname = "attoparsec"; - version = "0.13.0.1"; - src = "${ghcjsBoot}/boot/attoparsec"; - doCheck = false; - libraryHaskellDepends = [ - array base bytestring containers deepseq scientific text - transformers - ]; - testHaskellDepends = [ - array base bytestring containers deepseq QuickCheck - quickcheck-unicode scientific test-framework - test-framework-quickcheck2 text transformers vector - ]; - jailbreak = true; - homepage = https://github.com/bos/attoparsec; - description = "Fast combinator parsing for bytestrings and text"; - license = stdenv.lib.licenses.bsd3; - }) {}; - case-insensitive = callPackage - ({ mkDerivation, base, bytestring, deepseq, hashable, HUnit, stdenv - , test-framework, test-framework-hunit, text - }: - mkDerivation { - pname = "case-insensitive"; - version = "1.2.0.4"; - src = "${ghcjsBoot}/boot/case-insensitive"; - doCheck = false; - libraryHaskellDepends = [ base bytestring deepseq hashable text ]; - testHaskellDepends = [ - base bytestring HUnit test-framework test-framework-hunit text - ]; - jailbreak = true; - homepage = https://github.com/basvandijk/case-insensitive; - description = "Case insensitive string comparison"; - license = stdenv.lib.licenses.bsd3; - }) {}; - dlist = callPackage - ({ mkDerivation, base, Cabal, deepseq, QuickCheck, stdenv }: - mkDerivation { - pname = "dlist"; - version = "0.7.1.1"; - src = "${ghcjsBoot}/boot/dlist"; - doCheck = false; - libraryHaskellDepends = [ base deepseq ]; - testHaskellDepends = [ base Cabal QuickCheck ]; - jailbreak = true; - homepage = https://github.com/spl/dlist; - description = "Difference lists"; - license = stdenv.lib.licenses.bsd3; - }) {}; - extensible-exceptions = callPackage - ({ mkDerivation, base, stdenv }: - mkDerivation { - pname = "extensible-exceptions"; - version = "0.1.1.4"; - src = "${ghcjsBoot}/boot/extensible-exceptions"; - doCheck = false; - libraryHaskellDepends = [ base ]; - jailbreak = true; - description = "Extensible exceptions"; - license = stdenv.lib.licenses.bsd3; - }) {}; - hashable = callPackage - ({ mkDerivation, base, bytestring, ghc-prim, HUnit, integer-gmp - , QuickCheck, random, stdenv, test-framework, test-framework-hunit - , test-framework-quickcheck2, text, unix - }: - mkDerivation { - pname = "hashable"; - version = "1.2.3.2"; - src = "${ghcjsBoot}/boot/hashable"; - doCheck = false; - libraryHaskellDepends = [ - base bytestring ghc-prim integer-gmp text - ]; - testHaskellDepends = [ - base bytestring ghc-prim HUnit QuickCheck random test-framework - test-framework-hunit test-framework-quickcheck2 text unix - ]; - jailbreak = true; - homepage = https://github.com/tibbe/hashable; - description = "A class for types that can be converted to a hash value"; - license = stdenv.lib.licenses.bsd3; - }) {}; - mtl = callPackage - ({ mkDerivation, base, stdenv, transformers }: - mkDerivation { - pname = "mtl"; - version = "2.2.1"; - src = "${ghcjsBoot}/boot/mtl"; - doCheck = false; - libraryHaskellDepends = [ base transformers ]; - jailbreak = true; - homepage = https://github.com/ekmett/mtl; - description = "Monad classes, using functional dependencies"; - license = stdenv.lib.licenses.bsd3; - }) {}; - old-time = callPackage - ({ mkDerivation, base, old-locale, stdenv }: - mkDerivation { - pname = "old-time"; - version = "1.1.0.3"; - src = "${ghcjsBoot}/boot/old-time"; - doCheck = false; - libraryHaskellDepends = [ base old-locale ]; - jailbreak = true; - description = "Time library"; - license = stdenv.lib.licenses.bsd3; - }) {}; - parallel = callPackage - ({ mkDerivation, array, base, containers, deepseq, stdenv }: - mkDerivation { - pname = "parallel"; - version = "3.2.0.6"; - src = "${ghcjsBoot}/boot/parallel"; - doCheck = false; - libraryHaskellDepends = [ array base containers deepseq ]; - jailbreak = true; - description = "Parallel programming library"; - license = stdenv.lib.licenses.bsd3; - }) {}; - scientific = callPackage - ({ mkDerivation, array, base, bytestring, deepseq, ghc-prim - , hashable, integer-gmp, QuickCheck, smallcheck, stdenv, tasty - , tasty-ant-xml, tasty-hunit, tasty-quickcheck, tasty-smallcheck - , text - }: - mkDerivation { - pname = "scientific"; - version = "0.3.3.8"; - src = "${ghcjsBoot}/boot/scientific"; - doCheck = false; - libraryHaskellDepends = [ - array base bytestring deepseq ghc-prim hashable integer-gmp text - ]; - testHaskellDepends = [ - base bytestring QuickCheck smallcheck tasty tasty-ant-xml - tasty-hunit tasty-quickcheck tasty-smallcheck text - ]; - jailbreak = true; - homepage = https://github.com/basvandijk/scientific; - description = "Numbers represented using scientific notation"; - license = stdenv.lib.licenses.bsd3; - }) {}; - stm = callPackage - ({ mkDerivation, array, base, stdenv }: - mkDerivation { - pname = "stm"; - version = "2.4.4"; - src = "${ghcjsBoot}/boot/stm"; - doCheck = false; - libraryHaskellDepends = [ array base ]; - jailbreak = true; - description = "Software Transactional Memory"; - license = stdenv.lib.licenses.bsd3; - }) {}; - syb = callPackage - ({ mkDerivation, base, containers, HUnit, mtl, stdenv }: - mkDerivation { - pname = "syb"; - version = "0.5.1"; - src = "${ghcjsBoot}/boot/syb"; - doCheck = false; - libraryHaskellDepends = [ base ]; - testHaskellDepends = [ base containers HUnit mtl ]; - jailbreak = true; - homepage = http://www.cs.uu.nl/wiki/GenericProgramming/SYB; - description = "Scrap Your Boilerplate"; - license = stdenv.lib.licenses.bsd3; - }) {}; - text = callPackage - ({ mkDerivation, array, base, binary, bytestring, deepseq, directory - , ghc-prim, HUnit, integer-gmp, QuickCheck, quickcheck-unicode - , random, stdenv, test-framework, test-framework-hunit - , test-framework-quickcheck2 - }: - mkDerivation { - pname = "text"; - version = "1.2.1.1"; - src = "${ghcjsBoot}/boot/text"; - doCheck = false; - libraryHaskellDepends = [ - array base binary bytestring deepseq ghc-prim integer-gmp - ]; - testHaskellDepends = [ - array base binary bytestring deepseq directory ghc-prim HUnit - integer-gmp QuickCheck quickcheck-unicode random test-framework - test-framework-hunit test-framework-quickcheck2 - ]; - jailbreak = true; - homepage = https://github.com/bos/text; - description = "An efficient packed Unicode text type"; - license = stdenv.lib.licenses.bsd3; - }) {}; - unordered-containers = callPackage - ({ mkDerivation, base, ChasingBottoms, containers, deepseq, hashable - , HUnit, QuickCheck, stdenv, test-framework, test-framework-hunit - , test-framework-quickcheck2 - }: - mkDerivation { - pname = "unordered-containers"; - version = "0.2.5.1"; - src = "${ghcjsBoot}/boot/unordered-containers"; - doCheck = false; - libraryHaskellDepends = [ base deepseq hashable ]; - testHaskellDepends = [ - base ChasingBottoms containers hashable HUnit QuickCheck - test-framework test-framework-hunit test-framework-quickcheck2 - ]; - jailbreak = true; - homepage = https://github.com/tibbe/unordered-containers; - description = "Efficient hashing-based container types"; - license = stdenv.lib.licenses.bsd3; - }) {}; - vector = callPackage - ({ mkDerivation, base, deepseq, ghc-prim, primitive, QuickCheck - , random, stdenv, template-haskell, test-framework - , test-framework-quickcheck2, transformers - }: - mkDerivation { - pname = "vector"; - version = "0.11.0.0"; - src = "${ghcjsBoot}/boot/vector"; - doCheck = false; - libraryHaskellDepends = [ base deepseq ghc-prim primitive ]; - testHaskellDepends = [ - base QuickCheck random template-haskell test-framework - test-framework-quickcheck2 transformers - ]; - jailbreak = true; - homepage = https://github.com/haskell/vector; - description = "Efficient Arrays"; - license = stdenv.lib.licenses.bsd3; - }) {}; - ghcjs-base = callPackage - ({ mkDerivation, aeson, array, attoparsec, base, bytestring - , containers, deepseq, directory, dlist, ghc-prim, ghcjs-prim - , hashable, HUnit, integer-gmp, primitive, QuickCheck - , quickcheck-unicode, random, scientific, stdenv, test-framework - , test-framework-hunit, test-framework-quickcheck2, text, time - , transformers, unordered-containers, vector - }: - mkDerivation { - pname = "ghcjs-base"; - version = "0.2.0.0"; - src = "${ghcjsBoot}/ghcjs/ghcjs-base"; - doCheck = false; - libraryHaskellDepends = [ - aeson attoparsec base bytestring containers deepseq dlist ghc-prim - ghcjs-prim hashable integer-gmp primitive scientific text time - transformers unordered-containers vector - ]; - testHaskellDepends = [ - array base bytestring deepseq directory ghc-prim ghcjs-prim HUnit - primitive QuickCheck quickcheck-unicode random test-framework - test-framework-hunit test-framework-quickcheck2 text - ]; - jailbreak = true; - homepage = https://github.com/ghcjs/ghcjs-base; - description = "Base library for GHCJS"; - license = stdenv.lib.licenses.mit; - }) {}; - Cabal = callPackage - ({ mkDerivation, array, base, binary, bytestring, containers - , deepseq, directory, extensible-exceptions, filepath, HUnit - , old-time, pretty, process, QuickCheck, regex-posix, stdenv - , test-framework, test-framework-hunit, test-framework-quickcheck2 - , time, unix - }: - mkDerivation { - pname = "Cabal"; - version = "1.22.8.0"; - src = "${ghcjsBoot}/boot/cabal/Cabal"; - doCheck = false; - libraryHaskellDepends = [ - array base binary bytestring containers deepseq directory filepath - pretty process time unix - ]; - testHaskellDepends = [ - base bytestring containers directory extensible-exceptions filepath - HUnit old-time process QuickCheck regex-posix test-framework - test-framework-hunit test-framework-quickcheck2 unix - ]; - jailbreak = true; - homepage = http://www.haskell.org/cabal/; - description = "A framework for packaging Haskell software"; - license = stdenv.lib.licenses.bsd3; - }) {}; -} diff --git a/pkgs/development/compilers/ghcjs/8.0/boot.patch b/pkgs/development/compilers/ghcjs/8.0/boot.patch deleted file mode 100644 index bbb5b30468cb..000000000000 --- a/pkgs/development/compilers/ghcjs/8.0/boot.patch +++ /dev/null @@ -1,86 +0,0 @@ -diff --git a/src-bin/Boot.hs b/src-bin/Boot.hs -index db8b12e..7b815c5 100644 ---- a/src-bin/Boot.hs -+++ b/src-bin/Boot.hs -@@ -540,9 +540,7 @@ initPackageDB :: B () - initPackageDB = do - msg info "creating package databases" - initDB "--global" <^> beLocations . blGlobalDB -- traverseOf_ _Just initUser <^> beLocations . blUserDBDir - where -- initUser dir = rm_f (dir </> "package.conf") >> initDB "--user" (dir </> "package.conf.d") - initDB dbName db = do - rm_rf db >> mkdir_p db - ghcjs_pkg_ ["init", toTextI db] `catchAny_` return () -@@ -566,29 +564,22 @@ installDevelopmentTree = subTop $ do - msgD info $ "preparing development boot tree" - checkpoint' "ghcjs-boot-git" "ghcjs-boot repository already cloned and prepared" $ do - testGit "ghcjs-boot" >>= \case -- Just False -> failWith "ghcjs-boot already exists and is not a git repository" -- Just True -> do -- msg info "ghcjs-boot repository already exists but checkpoint not reached, cleaning first, then cloning" -- rm_rf "ghcjs-boot" -+ Just _ -> do -+ msg info "ghcjs-boot repository already exists; initializing ghcjs-boot" - initGhcjsBoot - Nothing -> do - msgD info "cloning ghcjs-boot git repository" - initGhcjsBoot - checkpoint' "shims-git" "shims repository already cloned" $ do - testGit "shims" >>= \case -- Just False -> failWith "shims already exists and is not a git repository" -- Just True -> do -- msgD info "shims repository already exists but checkpoint not reached, cleaning first, then cloning" -- rm_rf "shims" -- cloneGit shimsDescr "shims" bsrcShimsDevBranch bsrcShimsDev -+ Just _ -> do -+ msgD info "shims repository already exists; moving on" - Nothing -> do - msgD info "cloning shims git repository" - cloneGit shimsDescr "shims" bsrcShimsDevBranch bsrcShimsDev - where - initGhcjsBoot = sub $ do -- cloneGit bootDescr "ghcjs-boot" bsrcBootDevBranch bsrcBootDev - cd "ghcjs-boot" -- git_ ["submodule", "update", "--init", "--recursive"] - mapM_ patchPackage =<< allPackages - preparePrimops - buildGenPrim -@@ -1201,14 +1192,14 @@ cabalInstallFlags parmakeGhcjs = do - , "--avoid-reinstalls" - , "--builddir", "dist" - , "--with-compiler", ghcjs ^. pgmLocText -+ , "--with-gcc", "@CC@" - , "--with-hc-pkg", ghcjsPkg ^. pgmLocText -- , "--prefix", toTextI instDir -+ , "--prefix", "@PREFIX@" -+ , "--libdir", "$prefix/lib/$compiler" -+ , "--libsubdir", "$pkgid" - , bool haddock "--enable-documentation" "--disable-documentation" - , "--haddock-html" ---- workaround for hoogle support being broken in haddock for GHC 7.10RC1 --#if !(__GLASGOW_HASKELL__ >= 709) - , "--haddock-hoogle" --#endif - , "--haddock-hyperlink-source" - -- don't slow down Windows builds too much, on other platforms we get this more - -- or less for free, thanks to dynamic-too -diff --git a/src/Compiler/Info.hs b/src/Compiler/Info.hs -index 33a401f..e2405a7 100644 ---- a/src/Compiler/Info.hs -+++ b/src/Compiler/Info.hs -@@ -48,13 +48,7 @@ compilerInfo nativeToo dflags = do - - -- | the directory to use if started without -B flag - getDefaultTopDir :: IO FilePath --getDefaultTopDir = do -- appdir <- getAppUserDataDirectory "ghcjs" -- return (appdir </> subdir </> "ghcjs") -- where -- targetARCH = arch -- targetOS = os -- subdir = targetARCH ++ '-':targetOS ++ '-':getFullCompilerVersion -+getDefaultTopDir = return "@PREFIX@/lib/ghcjs-@VERSION@" - - getDefaultLibDir :: IO FilePath - getDefaultLibDir = getDefaultTopDir diff --git a/pkgs/development/compilers/ghcjs/8.0/default.nix b/pkgs/development/compilers/ghcjs/8.0/default.nix deleted file mode 100644 index a786f536eb9b..000000000000 --- a/pkgs/development/compilers/ghcjs/8.0/default.nix +++ /dev/null @@ -1,50 +0,0 @@ -{ fetchgit, fetchFromGitHub, bootPkgs, cabal-install }: - -bootPkgs.callPackage ../base.nix { - version = "0.2.020170323"; - - inherit bootPkgs cabal-install; - - ghcjsSrc = fetchFromGitHub { - owner = "ghcjs"; - repo = "ghcjs"; - rev = "2b3759942fb5b2fc1a58d314d9b098d4622fa6b6"; - sha256 = "15asapg0va8dvcdycsx8dgk4xcpdnhml4h31wka6vvxf5anzz8aw"; - }; - ghcjsBootSrc = fetchgit { - url = git://github.com/ghcjs/ghcjs-boot.git; - rev = "106e144cca6529a1b9612c11aea5d6ef65b96745"; - sha256 = "0gxg8iiwvm93x1dwhxypczn9qiz4m1xvj8i7cf4snfdy2jdyhi5l"; - fetchSubmodules = true; - }; - - shims = import ./shims.nix { inherit fetchFromGitHub; }; - stage1Packages = [ - "array" - "base" - "binary" - "bytestring" - "containers" - "deepseq" - "directory" - "filepath" - "ghc-boot" - "ghc-boot-th" - "ghc-prim" - "ghci" - "ghcjs-prim" - "ghcjs-th" - "integer-gmp" - "pretty" - "primitive" - "process" - "rts" - "template-haskell" - "time" - "transformers" - "unix" - ]; - stage2 = import ./stage2.nix; - - patches = [ ./boot.patch ]; -} diff --git a/pkgs/development/compilers/ghcjs/8.0/shims.nix b/pkgs/development/compilers/ghcjs/8.0/shims.nix deleted file mode 100644 index a9a7f8d45e27..000000000000 --- a/pkgs/development/compilers/ghcjs/8.0/shims.nix +++ /dev/null @@ -1,7 +0,0 @@ -{ fetchFromGitHub }: -fetchFromGitHub { - owner = "ghcjs"; - repo = "shims"; - rev = "85395dce971e23a39e5f93af4ed139ca36d4e448"; - sha256 = "1kqgik75jx681s1kjx1s7dryigr3m940c3zb9vy0r3psxrw6sf2g"; -} diff --git a/pkgs/development/compilers/ghcjs/8.0/stage2.nix b/pkgs/development/compilers/ghcjs/8.0/stage2.nix deleted file mode 100644 index 18c7a76dd3af..000000000000 --- a/pkgs/development/compilers/ghcjs/8.0/stage2.nix +++ /dev/null @@ -1,545 +0,0 @@ -{ ghcjsBoot }: { callPackage }: - -{ - async = callPackage - ({ mkDerivation, base, HUnit, stdenv, stm, test-framework - , test-framework-hunit - }: - mkDerivation { - pname = "async"; - version = "2.1.1"; - src = "${ghcjsBoot}/boot/async"; - doCheck = false; - libraryHaskellDepends = [ base stm ]; - testHaskellDepends = [ - base HUnit test-framework test-framework-hunit - ]; - jailbreak = true; - homepage = "https://github.com/simonmar/async"; - description = "Run IO operations asynchronously and wait for their results"; - license = stdenv.lib.licenses.bsd3; - }) {}; - aeson = callPackage - ({ mkDerivation, attoparsec, base, base-compat, base-orphans - , base16-bytestring, bytestring, containers, deepseq, directory - , dlist, filepath, generic-deriving, ghc-prim, hashable - , hashable-time, HUnit, integer-logarithms, QuickCheck - , quickcheck-instances, scientific, stdenv, tagged - , template-haskell, test-framework, test-framework-hunit - , test-framework-quickcheck2, text, th-abstraction, time - , time-locale-compat, unordered-containers, uuid-types, vector - }: - mkDerivation { - pname = "aeson"; - version = "1.2.2.0"; - src = "${ghcjsBoot}/boot/aeson"; - doCheck = false; - libraryHaskellDepends = [ - attoparsec base base-compat bytestring containers deepseq dlist - ghc-prim hashable scientific tagged template-haskell text - th-abstraction time time-locale-compat unordered-containers - uuid-types vector - ]; - testHaskellDepends = [ - attoparsec base base-compat base-orphans base16-bytestring - bytestring containers directory dlist filepath generic-deriving - ghc-prim hashable hashable-time HUnit integer-logarithms QuickCheck - quickcheck-instances scientific tagged template-haskell - test-framework test-framework-hunit test-framework-quickcheck2 text - time time-locale-compat unordered-containers uuid-types vector - ]; - jailbreak = true; - homepage = "https://github.com/bos/aeson"; - description = "Fast JSON parsing and encoding"; - license = stdenv.lib.licenses.bsd3; - }) {}; - attoparsec = callPackage - ({ mkDerivation, array, base, bytestring, case-insensitive - , containers, criterion, deepseq, directory, filepath, ghc-prim - , http-types, parsec, QuickCheck, quickcheck-unicode, scientific - , stdenv, tasty, tasty-quickcheck, text, transformers - , unordered-containers, vector - }: - mkDerivation { - pname = "attoparsec"; - version = "0.13.1.0"; - src = "${ghcjsBoot}/boot/attoparsec"; - doCheck = false; - libraryHaskellDepends = [ - array base bytestring containers deepseq scientific text - transformers - ]; - testHaskellDepends = [ - array base bytestring deepseq QuickCheck quickcheck-unicode - scientific tasty tasty-quickcheck text transformers vector - ]; - benchmarkHaskellDepends = [ - array base bytestring case-insensitive containers criterion deepseq - directory filepath ghc-prim http-types parsec scientific text - transformers unordered-containers vector - ]; - jailbreak = true; - homepage = "https://github.com/bos/attoparsec"; - description = "Fast combinator parsing for bytestrings and text"; - license = stdenv.lib.licenses.bsd3; - }) {}; - base-compat = callPackage - ({ mkDerivation, base, hspec, QuickCheck, stdenv, unix }: - mkDerivation { - pname = "base-compat"; - version = "0.9.3"; - src = "${ghcjsBoot}/boot/base-compat"; - doCheck = false; - libraryHaskellDepends = [ base unix ]; - testHaskellDepends = [ base hspec QuickCheck ]; - jailbreak = true; - description = "A compatibility layer for base"; - license = stdenv.lib.licenses.mit; - }) {}; - bytestring-builder = callPackage - ({ mkDerivation, base, bytestring, deepseq, stdenv }: - mkDerivation { - pname = "bytestring-builder"; - version = "0.10.8.1.0"; - src = "${ghcjsBoot}/boot/bytestring-builder"; - doCheck = false; - libraryHaskellDepends = [ base bytestring deepseq ]; - jailbreak = true; - description = "The new bytestring builder, packaged outside of GHC"; - license = stdenv.lib.licenses.bsd3; - }) {}; - case-insensitive = callPackage - ({ mkDerivation, base, bytestring, criterion, deepseq, hashable - , HUnit, stdenv, test-framework, test-framework-hunit, text - }: - mkDerivation { - pname = "case-insensitive"; - version = "1.2.0.8"; - src = "${ghcjsBoot}/boot/case-insensitive"; - doCheck = false; - libraryHaskellDepends = [ base bytestring deepseq hashable text ]; - testHaskellDepends = [ - base bytestring HUnit test-framework test-framework-hunit text - ]; - benchmarkHaskellDepends = [ base bytestring criterion deepseq ]; - jailbreak = true; - homepage = "https://github.com/basvandijk/case-insensitive"; - description = "Case insensitive string comparison"; - license = stdenv.lib.licenses.bsd3; - }) {}; - dlist = callPackage - ({ mkDerivation, base, Cabal, deepseq, QuickCheck, stdenv }: - mkDerivation { - pname = "dlist"; - version = "0.8.0.2"; - src = "${ghcjsBoot}/boot/dlist"; - doCheck = false; - libraryHaskellDepends = [ base deepseq ]; - testHaskellDepends = [ base Cabal QuickCheck ]; - jailbreak = true; - homepage = "https://github.com/spl/dlist"; - description = "Difference lists"; - license = stdenv.lib.licenses.bsd3; - }) {}; - extensible-exceptions = callPackage - ({ mkDerivation, base, stdenv }: - mkDerivation { - pname = "extensible-exceptions"; - version = "0.1.1.4"; - src = "${ghcjsBoot}/boot/extensible-exceptions"; - doCheck = false; - libraryHaskellDepends = [ base ]; - jailbreak = true; - description = "Extensible exceptions"; - license = stdenv.lib.licenses.bsd3; - }) {}; - fail = callPackage - ({ mkDerivation, stdenv }: - mkDerivation { - pname = "fail"; - version = "4.9.0.0"; - src = "${ghcjsBoot}/boot/fail"; - jailbreak = true; - homepage = "https://prime.haskell.org/wiki/Libraries/Proposals/MonadFail"; - description = "Forward-compatible MonadFail class"; - license = stdenv.lib.licenses.bsd3; - }) {}; - hashable = callPackage - ({ mkDerivation, base, bytestring, criterion, ghc-prim, HUnit - , integer-gmp, QuickCheck, random, siphash, stdenv, test-framework - , test-framework-hunit, test-framework-quickcheck2, text, unix - }: - mkDerivation { - pname = "hashable"; - version = "1.2.4.0"; - src = "${ghcjsBoot}/boot/hashable"; - doCheck = false; - libraryHaskellDepends = [ - base bytestring ghc-prim integer-gmp text - ]; - testHaskellDepends = [ - base bytestring ghc-prim HUnit QuickCheck random test-framework - test-framework-hunit test-framework-quickcheck2 text unix - ]; - benchmarkHaskellDepends = [ - base bytestring criterion ghc-prim integer-gmp siphash text - ]; - jailbreak = true; - homepage = "http://github.com/tibbe/hashable"; - description = "A class for types that can be converted to a hash value"; - license = stdenv.lib.licenses.bsd3; - }) {}; - integer-logarithms = callPackage - ({ mkDerivation, array, base, ghc-prim, integer-gmp, QuickCheck - , smallcheck, stdenv, tasty, tasty-hunit, tasty-quickcheck - , tasty-smallcheck - }: - mkDerivation { - pname = "integer-logarithms"; - version = "1.0.2"; - src = "${ghcjsBoot}/boot/integer-logarithms"; - doCheck = false; - libraryHaskellDepends = [ array base ghc-prim integer-gmp ]; - testHaskellDepends = [ - base QuickCheck smallcheck tasty tasty-hunit tasty-quickcheck - tasty-smallcheck - ]; - jailbreak = true; - homepage = "https://github.com/phadej/integer-logarithms"; - description = "Integer logarithms"; - license = stdenv.lib.licenses.mit; - }) {}; - mtl = callPackage - ({ mkDerivation, base, stdenv, transformers }: - mkDerivation { - pname = "mtl"; - version = "2.2.1"; - src = "${ghcjsBoot}/boot/mtl"; - doCheck = false; - libraryHaskellDepends = [ base transformers ]; - jailbreak = true; - homepage = "http://github.com/ekmett/mtl"; - description = "Monad classes, using functional dependencies"; - license = stdenv.lib.licenses.bsd3; - }) {}; - nats = callPackage - ({ mkDerivation, stdenv }: - mkDerivation { - pname = "nats"; - version = "1.1.1"; - src = "${ghcjsBoot}/boot/nats"; - jailbreak = true; - homepage = "http://github.com/ekmett/nats/"; - description = "Natural numbers"; - license = stdenv.lib.licenses.bsd3; - }) {}; - old-time = callPackage - ({ mkDerivation, base, old-locale, stdenv }: - mkDerivation { - pname = "old-time"; - version = "1.1.0.3"; - src = "${ghcjsBoot}/boot/old-time"; - doCheck = false; - libraryHaskellDepends = [ base old-locale ]; - jailbreak = true; - description = "Time library"; - license = stdenv.lib.licenses.bsd3; - }) {}; - parallel = callPackage - ({ mkDerivation, array, base, containers, deepseq, stdenv }: - mkDerivation { - pname = "parallel"; - version = "3.2.1.0"; - src = "${ghcjsBoot}/boot/parallel"; - doCheck = false; - libraryHaskellDepends = [ array base containers deepseq ]; - jailbreak = true; - description = "Parallel programming library"; - license = stdenv.lib.licenses.bsd3; - }) {}; - random = callPackage - ({ mkDerivation, base, stdenv, time }: - mkDerivation { - pname = "random"; - version = "1.1"; - src = "${ghcjsBoot}/boot/random"; - doCheck = false; - libraryHaskellDepends = [ base time ]; - testHaskellDepends = [ base ]; - jailbreak = true; - description = "random number library"; - license = stdenv.lib.licenses.bsd3; - }) {}; - scientific = callPackage - ({ mkDerivation, base, binary, bytestring, containers, criterion - , deepseq, ghc-prim, hashable, integer-gmp, integer-logarithms - , QuickCheck, smallcheck, stdenv, tasty, tasty-ant-xml, tasty-hunit - , tasty-quickcheck, tasty-smallcheck, text, vector - }: - mkDerivation { - pname = "scientific"; - version = "0.3.4.10"; - src = "${ghcjsBoot}/boot/scientific"; - doCheck = false; - libraryHaskellDepends = [ - base binary bytestring containers deepseq ghc-prim hashable - integer-gmp integer-logarithms text vector - ]; - testHaskellDepends = [ - base binary bytestring QuickCheck smallcheck tasty tasty-ant-xml - tasty-hunit tasty-quickcheck tasty-smallcheck text - ]; - benchmarkHaskellDepends = [ base criterion ]; - jailbreak = true; - homepage = "https://github.com/basvandijk/scientific"; - description = "Numbers represented using scientific notation"; - license = stdenv.lib.licenses.bsd3; - }) {}; - semigroups = callPackage - ({ mkDerivation, base, stdenv }: - mkDerivation { - pname = "semigroups"; - version = "0.18.3"; - src = "${ghcjsBoot}/boot/semigroups"; - doCheck = false; - libraryHaskellDepends = [ base ]; - jailbreak = true; - homepage = "http://github.com/ekmett/semigroups/"; - description = "Anything that associates"; - license = stdenv.lib.licenses.bsd3; - }) {}; - stm = callPackage - ({ mkDerivation, array, base, stdenv }: - mkDerivation { - pname = "stm"; - version = "2.4.4.1"; - src = "${ghcjsBoot}/boot/stm"; - doCheck = false; - libraryHaskellDepends = [ array base ]; - jailbreak = true; - description = "Software Transactional Memory"; - license = stdenv.lib.licenses.bsd3; - }) {}; - syb = callPackage - ({ mkDerivation, base, containers, HUnit, mtl, stdenv }: - mkDerivation { - pname = "syb"; - version = "0.6"; - src = "${ghcjsBoot}/boot/syb"; - doCheck = false; - libraryHaskellDepends = [ base ]; - testHaskellDepends = [ base containers HUnit mtl ]; - jailbreak = true; - homepage = "http://www.cs.uu.nl/wiki/GenericProgramming/SYB"; - description = "Scrap Your Boilerplate"; - license = stdenv.lib.licenses.bsd3; - }) {}; - tagged = callPackage - ({ mkDerivation, base, deepseq, stdenv, template-haskell - , transformers, transformers-compat - }: - mkDerivation { - pname = "tagged"; - version = "0.8.5"; - src = "${ghcjsBoot}/boot/tagged"; - doCheck = false; - libraryHaskellDepends = [ - base deepseq template-haskell transformers transformers-compat - ]; - jailbreak = true; - homepage = "http://github.com/ekmett/tagged"; - description = "Haskell 98 phantom types to avoid unsafely passing dummy arguments"; - license = stdenv.lib.licenses.bsd3; - }) {}; - text = callPackage - ({ mkDerivation, array, base, binary, bytestring, deepseq, directory - , ghc-prim, HUnit, integer-gmp, QuickCheck, quickcheck-unicode - , random, stdenv, test-framework, test-framework-hunit - , test-framework-quickcheck2 - }: - mkDerivation { - pname = "text"; - version = "1.2.2.1"; - src = "${ghcjsBoot}/boot/text"; - doCheck = false; - libraryHaskellDepends = [ - array base binary bytestring deepseq ghc-prim integer-gmp - ]; - testHaskellDepends = [ - array base binary bytestring deepseq directory ghc-prim HUnit - integer-gmp QuickCheck quickcheck-unicode random test-framework - test-framework-hunit test-framework-quickcheck2 - ]; - jailbreak = true; - homepage = "https://github.com/bos/text"; - description = "An efficient packed Unicode text type"; - license = stdenv.lib.licenses.bsd3; - }) {}; - th-abstraction = callPackage - ({ mkDerivation, base, containers, ghc-prim, stdenv - , template-haskell - }: - mkDerivation { - pname = "th-abstraction"; - version = "0.2.6.0"; - src = "${ghcjsBoot}/boot/th-abstraction"; - doCheck = false; - libraryHaskellDepends = [ - base containers ghc-prim template-haskell - ]; - testHaskellDepends = [ base containers template-haskell ]; - jailbreak = true; - homepage = "https://github.com/glguy/th-abstraction"; - description = "Nicer interface for reified information about data types"; - license = stdenv.lib.licenses.isc; - }) {}; - time-locale-compat = callPackage - ({ mkDerivation, base, old-locale, stdenv, time }: - mkDerivation { - pname = "time-locale-compat"; - version = "0.1.1.3"; - src = "${ghcjsBoot}/boot/time-locale-compat"; - doCheck = false; - libraryHaskellDepends = [ base old-locale time ]; - jailbreak = true; - homepage = "https://github.com/khibino/haskell-time-locale-compat"; - description = "Compatibility of TimeLocale between old-locale and time-1.5"; - license = stdenv.lib.licenses.bsd3; - }) {}; - transformers-compat = callPackage - ({ mkDerivation, base, ghc-prim, stdenv, transformers }: - mkDerivation { - pname = "transformers-compat"; - version = "0.5.1.4"; - src = "${ghcjsBoot}/boot/transformers-compat"; - doCheck = false; - libraryHaskellDepends = [ base ghc-prim transformers ]; - jailbreak = true; - homepage = "http://github.com/ekmett/transformers-compat/"; - description = "A small compatibility shim exposing the new types from transformers 0.3 and 0.4 to older Haskell platforms."; - license = stdenv.lib.licenses.bsd3; - }) {}; - unordered-containers = callPackage - ({ mkDerivation, base, bytestring, ChasingBottoms, containers - , criterion, deepseq, deepseq-generics, hashable, hashmap, HUnit - , mtl, QuickCheck, random, stdenv, test-framework - , test-framework-hunit, test-framework-quickcheck2 - }: - mkDerivation { - pname = "unordered-containers"; - version = "0.2.7.2"; - src = "${ghcjsBoot}/boot/unordered-containers"; - doCheck = false; - libraryHaskellDepends = [ base deepseq hashable ]; - testHaskellDepends = [ - base ChasingBottoms containers hashable HUnit QuickCheck - test-framework test-framework-hunit test-framework-quickcheck2 - ]; - benchmarkHaskellDepends = [ - base bytestring containers criterion deepseq deepseq-generics - hashable hashmap mtl random - ]; - jailbreak = true; - homepage = "https://github.com/tibbe/unordered-containers"; - description = "Efficient hashing-based container types"; - license = stdenv.lib.licenses.bsd3; - }) {}; - uuid-types = callPackage - ({ mkDerivation, base, binary, bytestring, containers, criterion - , deepseq, hashable, HUnit, QuickCheck, random, stdenv, tasty - , tasty-hunit, tasty-quickcheck, text, unordered-containers - }: - mkDerivation { - pname = "uuid-types"; - version = "1.0.3"; - src = "${ghcjsBoot}/boot/uuid/uuid-types"; - doCheck = false; - libraryHaskellDepends = [ - base binary bytestring deepseq hashable random text - ]; - testHaskellDepends = [ - base bytestring HUnit QuickCheck tasty tasty-hunit tasty-quickcheck - ]; - benchmarkHaskellDepends = [ - base bytestring containers criterion deepseq random - unordered-containers - ]; - jailbreak = true; - homepage = "https://github.com/hvr/uuid"; - description = "Type definitions for Universally Unique Identifiers"; - license = stdenv.lib.licenses.bsd3; - }) {}; - vector = callPackage - ({ mkDerivation, base, deepseq, ghc-prim, primitive, QuickCheck - , random, stdenv, template-haskell, test-framework - , test-framework-quickcheck2, transformers - }: - mkDerivation { - pname = "vector"; - version = "0.11.0.0"; - src = "${ghcjsBoot}/boot/vector"; - doCheck = false; - libraryHaskellDepends = [ base deepseq ghc-prim primitive ]; - testHaskellDepends = [ - base QuickCheck random template-haskell test-framework - test-framework-quickcheck2 transformers - ]; - jailbreak = true; - homepage = "https://github.com/haskell/vector"; - description = "Efficient Arrays"; - license = stdenv.lib.licenses.bsd3; - }) {}; - ghcjs-base = callPackage - ({ mkDerivation, aeson, array, attoparsec, base, bytestring - , containers, deepseq, directory, dlist, ghc-prim, ghcjs-prim - , hashable, HUnit, integer-gmp, primitive, QuickCheck - , quickcheck-unicode, random, scientific, stdenv, test-framework - , test-framework-hunit, test-framework-quickcheck2, text, time - , transformers, unordered-containers, vector - }: - mkDerivation { - pname = "ghcjs-base"; - version = "0.2.0.0"; - src = "${ghcjsBoot}/ghcjs/ghcjs-base"; - doCheck = false; - libraryHaskellDepends = [ - aeson attoparsec base bytestring containers deepseq dlist ghc-prim - ghcjs-prim hashable integer-gmp primitive scientific text time - transformers unordered-containers vector - ]; - testHaskellDepends = [ - array base bytestring deepseq directory ghc-prim ghcjs-prim HUnit - primitive QuickCheck quickcheck-unicode random test-framework - test-framework-hunit test-framework-quickcheck2 text - ]; - jailbreak = true; - homepage = "http://github.com/ghcjs/ghcjs-base"; - description = "base library for GHCJS"; - license = stdenv.lib.licenses.mit; - }) {}; - Cabal = callPackage - ({ mkDerivation, array, base, binary, bytestring, containers - , deepseq, directory, exceptions, filepath, old-time, pretty - , process, QuickCheck, regex-posix, stdenv, tagged, tasty - , tasty-hunit, tasty-quickcheck, time, transformers, unix - }: - mkDerivation { - pname = "Cabal"; - version = "1.24.0.0"; - src = "${ghcjsBoot}/boot/cabal/Cabal"; - doCheck = false; - libraryHaskellDepends = [ - array base binary bytestring containers deepseq directory filepath - pretty process time unix - ]; - testHaskellDepends = [ - base bytestring containers directory exceptions filepath old-time - pretty process QuickCheck regex-posix tagged tasty tasty-hunit - tasty-quickcheck transformers unix - ]; - jailbreak = true; - homepage = "http://www.haskell.org/cabal/"; - description = "A framework for packaging Haskell software"; - license = stdenv.lib.licenses.bsd3; - }) {}; -} diff --git a/pkgs/development/compilers/graalvm/default.nix b/pkgs/development/compilers/graalvm/default.nix index 7721ce06a561..a35143b43496 100644 --- a/pkgs/development/compilers/graalvm/default.nix +++ b/pkgs/development/compilers/graalvm/default.nix @@ -50,6 +50,9 @@ let rec { sha1 = "280c265b789e041c02e5c97815793dfc283fb1e6"; name = "LIBFFI_${sha1}/libffi.tar.gz"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/libffi-3.2.1.tar.gz; } rec { sha1 = "8819cea8bfe22c9c63f55465e296b3855ea41786"; name = "TruffleJSON_${sha1}/trufflejson.jar"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/trufflejson-20180130.jar; } rec { sha1 = "9712a8124c40298015f04a74f61b3d81a51513af"; name = "CHECKSTYLE_8.8_${sha1}/checkstyle-8.8.jar"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/checkstyle-8.8-all.jar; } + rec { sha1 = "a828a4f32caf9ac0b74f2548f87310959558c526"; name = "VISUALVM_COMMON_${sha1}/visualvm-common.tar.gz"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/visualvm-612.tar.gz; } + rec { sha1 = "7ac829f0c9a37f5cc39afd2265588a365480720d"; name = "VISUALVM_PLATFORM_SPECIFIC_${sha1}/visualvm-platform-specific.tar.gz"; url = https://lafo.ssw.uni-linz.ac.at/pub/graal-external-deps/visualvm-612-linux-amd64.tar.gz; } + rec { sha1 = "e6e60889b7211a80b21052a249bd7e0f88f79fee"; name = "Java-WebSocket_${sha1}/java-websocket.jar"; url = mirror://maven/org/java-websocket/Java-WebSocket/1.3.9/Java-WebSocket-1.3.9.jar; } ]; findbugs = fetchzip { @@ -61,13 +64,13 @@ let in rec { mx = stdenv.mkDerivation rec { - version = "5.176.4"; + version = "5.192.0"; name = "mx"; src = fetchFromGitHub { owner = "graalvm"; repo = "mx"; rev = version; - sha256 = "0xmx4hpnd6m9hk49lgwnvwd0q11s2m4d8axwq7zzc8wm10d692xw"; + sha256 = "04gdf1gzlc8a6li8lcnrs2j9zicj11fs1vqqf7cmhb4pm2h72hml"; }; nativeBuildInputs = [ makeWrapper ]; buildPhase = '' @@ -79,6 +82,11 @@ in rec { 'def download(path, urls, verbose=False, abortOnError=True, verifyOnly=False): print("FAKE download(path={} urls={} verbose={} abortOnError={} verifyOnly={})".format(path, urls, verbose, abortOnError, verifyOnly)) return True' + + # avoid crash with 'ValueError: ZIP does not support timestamps before 1980' + substituteInPlace mx.py --replace \ + 'zipfile.ZipInfo(arcname, time.localtime(os.path.getmtime(join(root, f)))[:6])' \ + 'zipfile.ZipInfo(arcname, time.strptime ("1 Jan 1980", "%d %b %Y" )[:6])' ''; installPhase = '' mkdir -p $out/bin @@ -97,9 +105,9 @@ in rec { # copy of pkgs.oraclejvm8 with JVMCI interface (TODO: it should work with pkgs.openjdk8 too) jvmci8 = stdenv.mkDerivation rec { - version = "0.45"; + version = "0.49"; name = let - n = "jvmci8u171-${version}"; + n = "jvmci${/*"8u191"*/ lib.removePrefix "oraclejdk-" oraclejdk8.name}-${version}"; in if (lib.stringLength n) == (lib.stringLength oraclejdk8.name) then n else @@ -108,7 +116,7 @@ in rec { owner = "graalvm"; repo = "graal-jvmci-8"; rev = "jvmci-${version}"; - sha256 = "1nppk9dpamisiadss1iy82i3rf6igndbf1vax85w9lz310kh0d12"; + sha256 = "1zgin0w1qa7wmfhcisx470fhnmddfxxp5nyyix31yaa7dznql82k"; }; buildInputs = [ mx mercurial ]; postUnpack = '' @@ -146,7 +154,7 @@ in rec { }; graalvm8 = stdenv.mkDerivation rec { - version = "1.0.0-rc3"; + version = "1.0.0-rc8"; name = let n = "graal-${version}"; in if (lib.stringLength n) == (lib.stringLength jvmci8.name) then @@ -157,7 +165,7 @@ in rec { owner = "oracle"; repo = "graal"; rev = "vm-${version}"; - sha256 = "1hcs4m6ailapgi3bikav1i517vqn5pn595cyqqjfvlnkjwihbnc3"; + sha256 = "1fada4awrr8bhw294xdiq4bagvgrlcr44mw6338gaal0ky3vkm0p"; }; buildInputs = [ mx zlib mercurial jvmci8 ]; postUnpack = '' @@ -170,6 +178,17 @@ in rec { hg checkout ${lib.escapeShellArg src.rev} ) ''; + postPatch = '' + substituteInPlace substratevm/src/com.oracle.svm.core.posix/src/com/oracle/svm/core/posix/headers/PosixDirectives.java \ + --replace '<zlib.h>' '<${zlib.dev}/include/zlib.h>' + substituteInPlace substratevm/src/com.oracle.svm.hosted/src/com/oracle/svm/hosted/image/CCLinkerInvocation.java \ + --replace 'cmd.add("-v");' 'cmd.add("-v"); cmd.add("-L${zlib}/lib");' + substituteInPlace substratevm/src/com.oracle.svm.hosted/src/com/oracle/svm/hosted/c/codegen/CCompilerInvoker.java \ + --replace 'command.add(Platform.includedIn(Platform.WINDOWS.class) ? "CL" : "gcc");' \ + 'command.add(Platform.includedIn(Platform.WINDOWS.class) ? "CL" : "${stdenv.cc}/bin/gcc");' + substituteInPlace substratevm/src/com.oracle.svm.hosted/src/com/oracle/svm/hosted/image/CCLinkerInvocation.java \ + --replace 'protected String compilerCommand = "cc";' 'protected String compilerCommand = "${stdenv.cc}/bin/cc";' + ''; buildPhase = '' # make a copy of jvmci8 cp -dpR ${jvmci8} $out @@ -178,13 +197,14 @@ in rec { export MX_ALT_OUTPUT_ROOT=$NIX_BUILD_TOP/mxbuild export MX_CACHE_DIR=${makeMxCache graal-mxcache} + ( cd substratevm mkdir -p clibraries mx --java-home $out build # bootstrap native-image (that was removed from mx build in https://github.com/oracle/graal/commit/140d7a7edf54ec5872a8ff45869cd1ae499efde4) - mx --java-home $out native-image -cp $MX_ALT_OUTPUT_ROOT/substratevm/dists/svm-driver.jar com.oracle.svm.driver.NativeImage + mx --java-home $out native-image -cp $MX_ALT_OUTPUT_ROOT/substratevm/dists/jdk1.8/svm-driver.jar com.oracle.svm.driver.NativeImage ) ( cd tools mx --java-home $out build @@ -195,17 +215,17 @@ in rec { mkdir -p $out/jre/tools/{profiler,chromeinspector,truffle/builder} $out/jre/lib/{graal,include,truffle/include} cp -vpLR substratevm/svmbuild/native-image-root/lib/* $out/jre/lib/ || true # ignore "same file" error when dereferencing symlinks cp -vp $MX_ALT_OUTPUT_ROOT/truffle/linux-amd64/truffle-nfi-native/bin/* $out/jre/lib/amd64/ - cp -vp $MX_ALT_OUTPUT_ROOT/compiler/dists/graal-*processor*.jar $out/jre/lib/graal/ + cp -vp $MX_ALT_OUTPUT_ROOT/compiler/dists/jdk1.8/graal-*processor*.jar $out/jre/lib/graal/ cp -vp $MX_ALT_OUTPUT_ROOT/truffle/linux-amd64/truffle-nfi-native/include/* $out/jre/lib/include/ - cp -vp $MX_ALT_OUTPUT_ROOT/compiler/dists/graal-management.jar $out/jre/lib/jvmci/ + cp -vp $MX_ALT_OUTPUT_ROOT/compiler/dists/jdk1.8/graal-management.jar $out/jre/lib/jvmci/ cp -vdpR $out/jre/lib/svm/clibraries $out/jre/lib/svm/builder/ - cp -vpR $MX_ALT_OUTPUT_ROOT/truffle/dists/* $out/jre/lib/truffle/ + cp -vpR $MX_ALT_OUTPUT_ROOT/truffle/dists/jdk1.8/* $out/jre/lib/truffle/ cp -vp $MX_ALT_OUTPUT_ROOT/truffle/linux-amd64/truffle-nfi-native/include/* $out/jre/lib/truffle/include/ cp -vpLR substratevm/svmbuild/native-image-root/tools/* $out/jre/tools/ cp -vpR $MX_ALT_OUTPUT_ROOT/tools/dists/chromeinspector* $out/jre/tools/chromeinspector/ cp -vpR $MX_ALT_OUTPUT_ROOT/tools/dists/truffle-profiler* $out/jre/tools/profiler/ cp -vpR $MX_ALT_OUTPUT_ROOT/truffle/linux-amd64/truffle-nfi-native/* $out/jre/tools/truffle/ - cp -vp $MX_ALT_OUTPUT_ROOT/truffle/dists/truffle-nfi.jar $out/jre/tools/truffle/builder/ + cp -vp $MX_ALT_OUTPUT_ROOT/truffle/dists/jdk1.8/truffle-nfi.jar $out/jre/tools/truffle/builder/ echo "name=GraalVM ${version}" > $out/jre/lib/amd64/server/vm.properties echo -n "graal" > $out/jre/lib/jvmci/compiler-name diff --git a/pkgs/development/compilers/mentor/default.nix b/pkgs/development/compilers/mentor/default.nix deleted file mode 100644 index 4f09df7f2ea0..000000000000 --- a/pkgs/development/compilers/mentor/default.nix +++ /dev/null @@ -1,80 +0,0 @@ -# Sourcery CodeBench Lite toolchain(s) (GCC) from Mentor Graphics - -{ stdenv, fetchurl, patchelf, ncurses }: - -let - - buildToolchain = - { name, src, description }: - - stdenv.mkDerivation rec { - inherit name src; - - nativeBuildInputs = [ patchelf ]; - - buildCommand = '' - # Unpack tarball - mkdir -p "$out" - tar --strip-components=1 -xjf "$src" -C "$out" - - # Patch binaries - interpreter="$(cat "$NIX_CC"/nix-support/dynamic-linker)" - for file in "$out"/bin/* "$out"/libexec/gcc/*/*/* "$out"/*/bin/*; do - # Skip non-executable files - case "$file" in - *README.txt) echo "skipping $file"; continue;; - *liblto_plugin.so*) echo "skipping $file"; continue;; - esac - - # Skip directories - test -d "$file" && continue - - echo "patchelf'ing $file" - patchelf --set-interpreter "$interpreter" "$file" - - # GDB needs ncurses - case "$file" in - *gdb) patchelf --set-rpath "${ncurses.out}/lib" "$file";; - esac - done - - # Manpages - mkdir -p "$out/share/man" - ln -s "$out"/share/doc/*/man/man1 "$out/share/man/man1" - ln -s "$out"/share/doc/*/man/man7 "$out/share/man/man7" - ''; - - meta = with stdenv.lib; { - inherit description; - homepage = https://www.mentor.com/embedded-software/sourcery-tools/sourcery-codebench/editions/lite-edition/; - license = licenses.gpl3; - platforms = platforms.linux; - maintainers = [ maintainers.bjornfor ]; - }; - }; - -in - -{ - - armLinuxGnuEabi = let version = "2013.05-24"; in buildToolchain rec { - name = "sourcery-codebench-lite-arm-linux-gnueabi-${version}"; - description = "Sourcery CodeBench Lite toolchain (GCC) for ARM GNU/Linux, from Mentor Graphics"; - src = fetchurl { - url = "http://sourcery.mentor.com/public/gnu_toolchain/arm-none-linux-gnueabi/arm-${version}-arm-none-linux-gnueabi-i686-pc-linux-gnu.tar.bz2"; - sha256 = "1xb075ia61c59cya2jl8zp4fvqpfnwkkc5330shvgdlg9981qprr"; - }; - }; - - armEabi = let version = "2013.05-23"; in buildToolchain rec { - name = "sourcery-codebench-lite-arm-eabi-${version}"; - description = "Sourcery CodeBench Lite toolchain (GCC) for ARM EABI, from Mentor Graphics"; - src = fetchurl { - url = "http://sourcery.mentor.com/public/gnu_toolchain/arm-none-eabi/arm-${version}-arm-none-eabi-i686-pc-linux-gnu.tar.bz2"; - sha256 = "0nbvdwj3kcv9scx808gniqp0ncdiy2i7afmdvribgkz1lsfin923"; - }; - }; - - # TODO: Sourcery CodeBench is also available for MIPS, Power, SuperH, - # ColdFire (and more). -} diff --git a/pkgs/development/compilers/microscheme/default.nix b/pkgs/development/compilers/microscheme/default.nix index cfee1b0d8639..f15a76243277 100644 --- a/pkgs/development/compilers/microscheme/default.nix +++ b/pkgs/development/compilers/microscheme/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchzip, vim, avrdude, avrbinutils, avrgcc, avrlibc, makeWrapper }: +{ stdenv, fetchzip, vim, makeWrapper }: stdenv.mkDerivation rec { name = "microscheme-${version}"; @@ -10,15 +10,10 @@ stdenv.mkDerivation rec { sha256 = "1r3ng4pw1s9yy1h5rafra1rq19d3vmb5pzbpcz1913wz22qdd976"; }; - # Just a guess - propagatedBuildInputs = [ avrlibc ]; buildInputs = [ makeWrapper vim ]; installPhase = '' make install PREFIX=$out - - wrapProgram $out/bin/microscheme \ - --prefix PATH : "${stdenv.lib.makeBinPath [ avrdude avrgcc avrbinutils ]}" ''; meta = with stdenv.lib; { diff --git a/pkgs/development/compilers/mono/4.0.nix b/pkgs/development/compilers/mono/4.0.nix deleted file mode 100644 index 892ae99abaf5..000000000000 --- a/pkgs/development/compilers/mono/4.0.nix +++ /dev/null @@ -1,9 +0,0 @@ -{ callPackage, Foundation, libobjc }: -callPackage ./generic.nix (rec { - inherit Foundation libobjc; - version = "4.0.4.1"; - sha256 = "1ydw9l89apc9p7xr5mdzy0h97g2q6v243g82mxswfc2rrqhfs4gd"; - meta = { - knownVulnerabilities = [ "CVE-2009-0689" ]; - }; -}) diff --git a/pkgs/development/compilers/mono/4.4.nix b/pkgs/development/compilers/mono/4.4.nix deleted file mode 100644 index 9a3ccd1fd861..000000000000 --- a/pkgs/development/compilers/mono/4.4.nix +++ /dev/null @@ -1,8 +0,0 @@ -{ callPackage, Foundation, libobjc }: - -callPackage ./generic.nix (rec { - inherit Foundation libobjc; - version = "4.4.2.11"; - sha256 = "0cxnypw1j7s253wr5hy05k42ghgg2s9qibp10kndwnp5bv12q34h"; - enableParallelBuilding = false; # #32386, https://hydra.nixos.org/build/65565737 -}) diff --git a/pkgs/development/compilers/mono/4.6.nix b/pkgs/development/compilers/mono/4.6.nix index 2bba660b69cd..5ccdadc28787 100644 --- a/pkgs/development/compilers/mono/4.6.nix +++ b/pkgs/development/compilers/mono/4.6.nix @@ -5,4 +5,5 @@ callPackage ./generic.nix (rec { version = "4.6.2.16"; sha256 = "190f7kcrm1y5x61s1xwdmjnwc3czsg50s3mml4xmix7byh3x2rc9"; enableParallelBuilding = false; # #32386, https://hydra.nixos.org/build/65617511 + meta.knownVulnerabilities = [ "CVE-2018-1002208" ]; }) diff --git a/pkgs/development/compilers/nim/default.nix b/pkgs/development/compilers/nim/default.nix index a4b706d35aa5..ae36041b33eb 100644 --- a/pkgs/development/compilers/nim/default.nix +++ b/pkgs/development/compilers/nim/default.nix @@ -1,14 +1,14 @@ # based on https://github.com/nim-lang/Nim/blob/v0.18.0/.travis.yml -{ stdenv, lib, fetchurl, makeWrapper, nodejs-slim-8_x, openssl, pcre, readline, sqlite, boehmgc, sfml, tzdata, coreutils }: +{ stdenv, lib, fetchurl, makeWrapper, nodejs-slim-10_x, openssl, pcre, readline, boehmgc, sfml, tzdata, coreutils }: stdenv.mkDerivation rec { name = "nim-${version}"; - version = "0.18.0"; + version = "0.19.0"; src = fetchurl { url = "https://nim-lang.org/download/${name}.tar.xz"; - sha256 = "45c74adb35f08dfa9add1112ae17330e5d902ebb4a36e7046caee8b79e6f3bd0"; + sha256 = "0biwvw1gividp5lkf0daq1wp9v6ms4xy6dkf5zj0sn9w4m3n76d1"; }; doCheck = !stdenv.isDarwin; @@ -19,7 +19,6 @@ stdenv.mkDerivation rec { "-lcrypto" "-lpcre" "-lreadline" - "-lsqlite3" "-lgc" ]; @@ -28,12 +27,21 @@ stdenv.mkDerivation rec { # used for bootstrapping, but koch insists on moving the nim compiler around # as part of building it, so it cannot be read-only + nativeBuildInputs = [ + makeWrapper nodejs-slim-10_x tzdata coreutils + ]; + buildInputs = [ - makeWrapper nodejs-slim-8_x tzdata coreutils - openssl pcre readline sqlite boehmgc sfml + openssl pcre readline boehmgc sfml ]; + phases = [ "unpackPhase" "patchPhase" "buildPhase" "installPhase" "checkPhase" ]; + buildPhase = '' + # use $CC to trigger the linker since calling ld in build.sh causes an error + LD=$CC + # build.sh wants to write to $HOME/.cache + HOME=$TMPDIR sh build.sh ./bin/nim c koch ./koch boot -d:release \ @@ -51,33 +59,24 @@ stdenv.mkDerivation rec { --suffix PATH : ${lib.makeBinPath [ stdenv.cc ]} ''; - postPatch = + patchPhase = let disableTest = ''sed -i '1i discard \"\"\"\n disabled: true\n\"\"\"\n\n' ''; + disableStdLibTest = ''sed -i -e '/^when isMainModule/,/^END$/{s/^/#/}' ''; disableCompile = ''sed -i -e 's/^/#/' ''; in '' substituteInPlace ./tests/async/tioselectors.nim --replace "/bin/sleep" "sleep" substituteInPlace ./tests/osproc/tworkingdir.nim --replace "/usr/bin" "${coreutils}/bin" substituteInPlace ./tests/stdlib/ttimes.nim --replace "/usr/share/zoneinfo" "${tzdata}/share/zoneinfo" - # disable supposedly broken tests - ${disableTest} ./tests/errmsgs/tproper_stacktrace2.nim - ${disableTest} ./tests/vm/trgba.nim - # disable tests requiring network access (not available in the build container) ${disableTest} ./tests/stdlib/thttpclient.nim - ${disableTest} ./tests/cpp/tasync_cpp.nim - ${disableTest} ./tests/niminaction/Chapter7/Tweeter/src/tweeter.nim - - # disable tests requiring un-downloadable dependencies (using nimble, which isn't available in the fetch phase) - ${disableCompile} ./tests/manyloc/keineschweine/keineschweine.nim - ${disableTest} ./tests/manyloc/keineschweine/keineschweine.nim - ${disableCompile} ./tests/manyloc/nake/nakefile.nim - ${disableTest} ./tests/manyloc/nake/nakefile.nim - ${disableCompile} ./tests/manyloc/named_argument_bug/main.nim - ${disableTest} ./tests/manyloc/named_argument_bug/main.nim + '' + lib.optionalString stdenv.isAarch64 '' + # disable test supposedly broken on aarch64 + ${disableStdLibTest} ./lib/pure/stats.nim ''; checkPhase = '' + PATH=$PATH:$out/bin ./koch tests ''; diff --git a/pkgs/development/compilers/ocaml/4.07.nix b/pkgs/development/compilers/ocaml/4.07.nix index 19b9626f4e8f..c1952f30ba68 100644 --- a/pkgs/development/compilers/ocaml/4.07.nix +++ b/pkgs/development/compilers/ocaml/4.07.nix @@ -1,8 +1,8 @@ import ./generic.nix { major_version = "4"; minor_version = "07"; - patch_version = "0"; - sha256 = "03wzkzv6w4rdiiva20g5amz0n4x75swpjl8d80468p6zm8hgfnzl"; + patch_version = "1"; + sha256 = "1f07hgj5k45cylj1q3k5mk8yi02cwzx849b1fwnwia8xlcfqpr6z"; # If the executable is stripped it does not work dontStrip = true; diff --git a/pkgs/development/compilers/openjdk/10.nix b/pkgs/development/compilers/openjdk/11.nix index 1c125fac62f1..e2d89f3ef728 100644 --- a/pkgs/development/compilers/openjdk/10.nix +++ b/pkgs/development/compilers/openjdk/11.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchurl, bash, cpio, pkgconfig, file, which, unzip, zip, cups, freetype +{ stdenv, lib, fetchurl, bash, cpio, autoconf, pkgconfig, file, which, unzip, zip, cups, freetype , alsaLib, bootjdk, perl, liberation_ttf, fontconfig, zlib, lndir , libX11, libICE, libXrender, libXext, libXt, libXtst, libXi, libXinerama, libXcursor, libXrandr , libjpeg, giflib @@ -10,31 +10,30 @@ let /** - * The JRE libraries are in directories that depend on the CPU. + * The JDK libraries are in directories that depend on the CPU. */ architecture = if stdenv.hostPlatform.system == "i686-linux" then "i386" else "amd64"; - update = "10.0.2"; + major = "11"; + update = ".0.1"; build = "13"; - repover = "jdk-${update}+${build}"; + repover = "jdk-${major}${update}+${build}"; paxflags = if stdenv.isi686 then "msp" else "m"; - openjdk10 = stdenv.mkDerivation { - name = "openjdk-${update}-b${build}"; + openjdk = stdenv.mkDerivation { + name = "openjdk-${major}${update}-b${build}"; src = fetchurl { - url = "http://hg.openjdk.java.net/jdk-updates/jdk10u/archive/${repover}.tar.gz"; - sha256 = "0y7hyzgvn6z8gyp3h9xvxwj6zda899y6i629jn6yxqzj96q56jpk"; + url = "http://hg.openjdk.java.net/jdk-updates/jdk${major}u/archive/${repover}.tar.gz"; + sha256 = "1ri3fv67rvs9xxhc3ynklbprhxbdsgpwafbw6wqj950xy5crgysm"; }; - outputs = [ "out" "jre" ]; - nativeBuildInputs = [ pkgconfig ]; buildInputs = [ - cpio file which unzip zip perl bootjdk zlib cups freetype alsaLib + autoconf cpio file which unzip zip perl bootjdk zlib cups freetype alsaLib libjpeg giflib libX11 libICE libXext libXrender libXtst libXt libXtst libXi libXinerama libXcursor libXrandr lndir fontconfig ] ++ lib.optionals (!minimal && enableGnome2) [ @@ -55,12 +54,11 @@ let configureFlagsArray=( "--with-boot-jdk=${bootjdk.home}" - "--with-update-version=${update}" + "--with-update-version=${major}${update}" "--with-build-number=${build}" "--with-milestone=fcs" "--enable-unlimited-crypto" "--disable-debug-symbols" - "--disable-freetype-bundling" "--with-zlib=system" "--with-giflib=system" "--with-stdc++lib=dynamic" @@ -86,7 +84,7 @@ let buildFlags = [ "all" ]; installPhase = '' - mkdir -p $out/lib/openjdk $out/share $jre/lib/openjdk + mkdir -p $out/lib/openjdk $out/share cp -av build/*/images/jdk/* $out/lib/openjdk @@ -101,57 +99,29 @@ let # jni.h expects jni_md.h to be in the header search path. ln -s $out/include/linux/*_md.h $out/include/ - # Copy the JRE to a separate output and setup fallback fonts - cp -av build/*/images/jre $jre/lib/openjdk/ - mkdir $out/lib/openjdk/jre - ${lib.optionalString (!minimal) '' - mkdir -p $jre/lib/openjdk/jre/lib/fonts/fallback - lndir ${liberation_ttf}/share/fonts/truetype $jre/lib/openjdk/jre/lib/fonts/fallback - ''} - # Remove crap from the installation. rm -rf $out/lib/openjdk/demo ${lib.optionalString minimal '' - for d in $out/lib/openjdk/lib $jre/lib/openjdk/jre/lib; do - rm ''${d}/{libjsound,libjsoundalsa,libfontmanager}.so - done + rm $out/lib/openjdk/lib/{libjsound,libfontmanager}.so ''} - lndir $jre/lib/openjdk/jre $out/lib/openjdk/jre - # Set PaX markings - exes=$(file $out/lib/openjdk/bin/* $jre/lib/openjdk/jre/bin/* 2> /dev/null | grep -E 'ELF.*(executable|shared object)' | sed -e 's/: .*$//') + exes=$(file $out/lib/openjdk/bin/* 2> /dev/null | grep -E 'ELF.*(executable|shared object)' | sed -e 's/: .*$//') echo "to mark: *$exes*" for file in $exes; do echo "marking *$file*" paxmark ${paxflags} "$file" done - # Remove duplicate binaries. - for i in $(cd $out/lib/openjdk/bin && echo *); do - if [ "$i" = java ]; then continue; fi - if cmp -s $out/lib/openjdk/bin/$i $jre/lib/openjdk/jre/bin/$i; then - ln -sfn $jre/lib/openjdk/jre/bin/$i $out/lib/openjdk/bin/$i - fi - done - ln -s $out/lib/openjdk/bin $out/bin - ln -s $jre/lib/openjdk/jre/bin $jre/bin - ln -s $jre/lib/openjdk/jre $out/jre ''; - # FIXME: this is unnecessary once the multiple-outputs branch is merged. preFixup = '' - prefix=$jre stripDirs "$STRIP" "$stripDebugList" "''${stripDebugFlags:--S}" - patchELF $jre - propagatedBuildInputs+=" $jre" - - # Propagate the setJavaClassPath setup hook from the JRE so that - # any package that depends on the JRE has $CLASSPATH set up - # properly. - mkdir -p $jre/nix-support + # Propagate the setJavaClassPath setup hook so that any package + # that depends on the JDK has $CLASSPATH set up properly. + mkdir -p $out/nix-support #TODO or printWords? cf https://github.com/NixOS/nixpkgs/pull/27427#issuecomment-317293040 - echo -n "${setJavaClassPath}" > $jre/nix-support/propagated-build-inputs + echo -n "${setJavaClassPath}" > $out/nix-support/propagated-build-inputs # Set JAVA_HOME automatically. mkdir -p $out/nix-support @@ -196,7 +166,7 @@ let passthru = { inherit architecture; - home = "${openjdk10}/lib/openjdk"; + home = "${openjdk}/lib/openjdk"; }; }; -in openjdk10 +in openjdk diff --git a/pkgs/development/compilers/openjdk/bootstrap.nix b/pkgs/development/compilers/openjdk/bootstrap.nix index 612f0db05821..1b20ca6cc606 100644 --- a/pkgs/development/compilers/openjdk/bootstrap.nix +++ b/pkgs/development/compilers/openjdk/bootstrap.nix @@ -16,12 +16,12 @@ let src = if stdenv.hostPlatform.system == "x86_64-linux" then (if version == "10" then fetchboot "10" "x86_64" "08085fsxc1qhqiv3yi38w8lrg3vm7s0m2yvnwr1c92v019806yq2" else if version == "8" then fetchboot "8" "x86_64" "18zqx6jhm3lizn9hh6ryyqc9dz3i96pwaz8f6nxfllk70qi5gvks" - else throw "No bootstrap for version") + else throw "No bootstrap jdk for version ${version}") else if stdenv.hostPlatform.system == "i686-linux" then (if version == "10" then fetchboot "10" "i686" "1blb9gyzp8gfyggxvggqgpcgfcyi00ndnnskipwgdm031qva94p7" else if version == "8" then fetchboot "8" "i686" "1yx04xh8bqz7amg12d13rw5vwa008rav59mxjw1b9s6ynkvfgqq9" else throw "No bootstrap for version") - else throw "No bootstrap for system"; + else throw "No bootstrap jdk for system ${stdenv.hostPlatform.system}"; bootstrap = runCommand "openjdk-bootstrap" { passthru.home = "${bootstrap}/lib/openjdk"; diff --git a/pkgs/development/compilers/openjdk/darwin/10.nix b/pkgs/development/compilers/openjdk/darwin/11.nix index 4969c12bff26..61c2d57423e4 100644 --- a/pkgs/development/compilers/openjdk/darwin/10.nix +++ b/pkgs/development/compilers/openjdk/darwin/11.nix @@ -6,13 +6,13 @@ let sha256 = "0nk7m0lgcbsvldq2wbfni2pzq8h818523z912i7v8hdcij5s48c0"; }; - jdk = stdenv.mkDerivation { - name = "zulu10.3+5-jdk10"; + jdk = stdenv.mkDerivation rec { + name = "zulu11.2.3-jdk11.0.1"; src = fetchurl { - url = https://cdn.azul.com/zulu/bin/zulu10.3+5-jdk10.0.2-macosx_x64.zip; - sha256 = "05pxfjn8fqw6ddr8m5hzyphwzqgrq8w6b4h3lwc1s7ymh05xmspz"; - curlOpts = "-H Referer:https://www.azul.com/downloads/zulu/zulu-linux/"; + url = "https://cdn.azul.com/zulu/bin/${name}-macosx_x64.tar.gz"; + sha256 = "1jxnxmy79inwf3146ygry1mzv3dj6yrzqll16j7dpr91x1p3dpqy"; + curlOpts = "-H Referer:https://www.azul.com/downloads/zulu/zulu-mac/"; }; buildInputs = [ unzip freetype ]; @@ -34,8 +34,8 @@ let ''; preFixup = '' - # Propagate the setJavaClassPath setup hook from the JRE so that - # any package that depends on the JRE has $CLASSPATH set up + # Propagate the setJavaClassPath setup hook from the JDK so that + # any package that depends on the JDK has $CLASSPATH set up # properly. mkdir -p $out/nix-support printWords ${setJavaClassPath} > $out/nix-support/propagated-build-inputs @@ -49,7 +49,6 @@ let ''; passthru = { - jre = jdk; home = jdk; }; diff --git a/pkgs/development/compilers/oraclejdk/jdk10-linux.nix b/pkgs/development/compilers/oraclejdk/jdk10-linux.nix deleted file mode 100644 index 23f44331dd89..000000000000 --- a/pkgs/development/compilers/oraclejdk/jdk10-linux.nix +++ /dev/null @@ -1,156 +0,0 @@ -{ swingSupport ? true -, stdenv -, requireFile -, makeWrapper -, file -, xorg ? null -, packageType ? "JDK" # JDK, JRE, or ServerJRE -, glib -, libxml2 -, ffmpeg_2 -, libxslt -, libGL -, freetype -, fontconfig -, gtk2 -, pango -, cairo -, alsaLib -, atk -, gdk_pixbuf -, zlib -, elfutils -, setJavaClassPath -}: - -assert swingSupport -> xorg != null; - -let - version = "10.0.2"; - - downloadUrlBase = http://www.oracle.com/technetwork/java/javase/downloads; - - rSubPaths = [ - "lib/jli" - "lib/server" - "lib" - ]; - -in - -let result = stdenv.mkDerivation rec { - name = if packageType == "JDK" then "oraclejdk-${version}" - else if packageType == "JRE" then "oraclejre-${version}" - else if packageType == "ServerJRE" then "oracleserverjre-${version}" - else abort "unknown package Type ${packageType}"; - - src = - if packageType == "JDK" then - requireFile { - name = "jdk-${version}_linux-x64_bin.tar.gz"; - url = "${downloadUrlBase}/jdk10-downloads-4416644.html"; - sha256 = "0arpzac64apji1s8d0gzizkvrjz0fbhz7l34af1j0365ac6w4cv6"; - } - else if packageType == "JRE" then - requireFile { - name = "jre-${version}_linux-x64_bin.tar.gz"; - url = "${downloadUrlBase}/jre10-downloads-4417026.html"; - sha256 = "0pc4a0a3fl6874vfaflf6jvpm9da647vp41pj0hihkspjyjhjabx"; - } - else if packageType == "ServerJRE" then - requireFile { - name = "serverjre-${version}_linux-x64_bin.tar.gz"; - url = "${downloadUrlBase}/sjre10-downloads-4417025.html"; - sha256 = "0hbcb4c6ncy0sbz02gyygyqcwkz0xpv4fwrx4sripia6vph9592c"; - } - else abort "unknown package Type ${packageType}"; - - nativeBuildInputs = [ file ]; - - buildInputs = [ makeWrapper ]; - - # See: https://github.com/NixOS/patchelf/issues/10 - dontStrip = 1; - - installPhase = '' - cd .. - - # Set PaX markings - exes=$(file $sourceRoot/bin/* 2> /dev/null | grep -E 'ELF.*(executable|shared object)' | sed -e 's/: .*$//') - for file in $exes; do - paxmark m "$file" - # On x86 for heap sizes over 700MB disable SEGMEXEC and PAGEEXEC as well. - ${stdenv.lib.optionalString stdenv.isi686 ''paxmark msp "$file"''} - done - - mv $sourceRoot $out - - shopt -s extglob - for file in $out/* - do - if test -f $file ; then - rm $file - fi - done - - if test -z "$pluginSupport"; then - rm -f $out/bin/javaws - fi - - mkdir $out/lib/plugins - ln -s $out/lib/libnpjp2.so $out/lib/plugins - - # for backward compatibility - ln -s $out $out/jre - - mkdir -p $out/nix-support - printWords ${setJavaClassPath} > $out/nix-support/propagated-build-inputs - - # Set JAVA_HOME automatically. - cat <<EOF >> $out/nix-support/setup-hook - if [ -z "\$JAVA_HOME" ]; then export JAVA_HOME=$out; fi - EOF - ''; - - postFixup = '' - rpath+="''${rpath:+:}${stdenv.lib.concatStringsSep ":" (map (a: "$out/${a}") rSubPaths)}" - - # set all the dynamic linkers - find $out -type f -perm -0100 \ - -exec patchelf --interpreter "$(cat $NIX_CC/nix-support/dynamic-linker)" \ - --set-rpath "$rpath" {} \; - - find $out -name "*.so" -exec patchelf --set-rpath "$rpath" {} \; - - # Oracle Java Mission Control needs to know where libgtk-x11 and related is - if test -x $out/bin/jmc; then - wrapProgram "$out/bin/jmc" \ - --suffix-each LD_LIBRARY_PATH ':' "$rpath" - fi - ''; - - /** - * libXt is only needed on amd64 - */ - libraries = - [stdenv.cc.libc glib libxml2 ffmpeg_2 libxslt libGL xorg.libXxf86vm alsaLib fontconfig freetype pango gtk2 cairo gdk_pixbuf atk zlib elfutils] ++ - (if swingSupport then [xorg.libX11 xorg.libXext xorg.libXtst xorg.libXi xorg.libXp xorg.libXt xorg.libXrender stdenv.cc.cc] else []); - - rpath = stdenv.lib.strings.makeLibraryPath libraries; - - passthru.mozillaPlugin = "/lib/plugins"; - - passthru.jre = result; # FIXME: use multiple outputs or return actual JRE package - - passthru.home = result; - - # for backward compatibility - passthru.architecture = ""; - - meta = with stdenv.lib; { - license = licenses.unfree; - platforms = [ "x86_64-linux" ]; # some inherit jre.meta.platforms - knownVulnerabilities = [ "Support ended in September 2018. Use OpenJDK or JDK 8." ]; - }; - -}; in result diff --git a/pkgs/development/compilers/sbcl/default.nix b/pkgs/development/compilers/sbcl/default.nix index 334ecbb168ba..1ef6dd065705 100644 --- a/pkgs/development/compilers/sbcl/default.nix +++ b/pkgs/development/compilers/sbcl/default.nix @@ -5,17 +5,20 @@ # Note that the created binaries still need `patchelf --set-interpreter ...` # to get rid of ${glibc} dependency. , purgeNixReferences ? false +, texinfo }: stdenv.mkDerivation rec { name = "sbcl-${version}"; - version = "1.4.12"; + version = "1.4.13"; src = fetchurl { url = "mirror://sourceforge/project/sbcl/sbcl/${version}/${name}-source.tar.bz2"; - sha256 = "0maa4h5zdykq050hdqk5wd74dhl6k7br3qrhfd4f2387skk8ky7a"; + sha256 = "120rnnz8367lk7ljqlf8xidm4b0d738xqsib4kq0q5ms5r7fzgvm"; }; + buildInputs = [texinfo]; + patchPhase = '' echo '"${version}.nixos"' > version.lisp-expr echo " @@ -46,11 +49,6 @@ stdenv.mkDerivation rec { '/date defaulted-source/i(or (and (= 2208988801 (file-write-date defaulted-source-truename)) (= 2208988801 (file-write-date defaulted-fasl-truename)))' # Fix the tests - sed -e '/deftest pwent/inil' -i contrib/sb-posix/posix-tests.lisp - sed -e '/deftest grent/inil' -i contrib/sb-posix/posix-tests.lisp - sed -e '/deftest .*ent.non-existing/,+5d' -i contrib/sb-posix/posix-tests.lisp - sed -e '/deftest \(pw\|gr\)ent/,+3d' -i contrib/sb-posix/posix-tests.lisp - sed -e '5,$d' -i contrib/sb-bsd-sockets/tests.lisp sed -e '5,$d' -i contrib/sb-simple-streams/*test*.lisp @@ -83,6 +81,7 @@ stdenv.mkDerivation rec { buildPhase = '' sh make.sh --prefix=$out --xc-host="${sbclBootstrapHost}" + (cd doc/manual ; make info) ''; installPhase = '' diff --git a/pkgs/development/compilers/swift/default.nix b/pkgs/development/compilers/swift/default.nix index 233eb6647c09..bbfa1be8f921 100644 --- a/pkgs/development/compilers/swift/default.nix +++ b/pkgs/development/compilers/swift/default.nix @@ -32,11 +32,10 @@ , makeWrapper , gnumake , file -#, systemtap }: let - v_base = "4.1.3"; + v_base = "4.2.1"; version = "${v_base}-RELEASE"; version_friendly = "${v_base}"; @@ -54,15 +53,15 @@ let # For more inforation, see: https://github.com/apple/swift/pull/3594#issuecomment-234169759 clang = fetch { repo = "swift-clang"; - sha256 = "0j8bi6jv4m4hqiib02q5cvnxd9j6bwiri853x6px86vai3mdff0h"; + sha256 = "0l6w4xzpl3w2nax9a0b885nfzhfj38p2g99158nb5bzfd4s0man7"; }; llvm = fetch { repo = "swift-llvm"; - sha256 = "0q5cv4iydm8c1kcax32573y3q2cbpihwgj5aa8ws1fnpy4jvq934"; + sha256 = "1664zwxbq0a1cmxr9n5a0vw6vdk6ygr7rpglpdsfc7ki857vpsyv"; }; compilerrt = fetch { repo = "swift-compiler-rt"; - sha256 = "1wkymmxi2v759xkwlzfrq9rivndjfvp6ikrzz10mvvrvyvrgwqnl"; + sha256 = "19s6qxn4i0kxpf39xjp2i7zg427iinbmaxqkbb1p91g616y367sf"; }; cmark = fetch { repo = "swift-cmark"; @@ -70,32 +69,32 @@ let }; lldb = fetch { repo = "swift-lldb"; - sha256 = "1d0pa7xm289bjb6r52hkkmlngkqkwbwgixnmm30bin2q18mkxk7s"; + sha256 = "00kz0xhj1p6ckyandj2gs1yfl29kxv84x9pfph00r8crbkd2jz7b"; }; llbuild = fetch { repo = "swift-llbuild"; - sha256 = "04y0ihfyam2n671vmpk9gy0gb9lb3ivh6mr19862p5kg5bmrcic1"; + sha256 = "1mkkhydshhxr28igbldzr0hhqvb6ql43cpf3ba5vglfkbcz6wh6q"; }; pm = fetch { repo = "swift-package-manager"; - sha256 = "08d87fc29qq7m92jaxkiczsa7b567pwbibiwwkzdrj6a0gr11qn3"; + sha256 = "1aqvmgq9g5zs4k2qnkvw3h3mar66d690hqq6g2dmrapsyb321j9l"; }; xctest = fetch { repo = "swift-corelibs-xctest"; - sha256 = "1alkgxx8jsr2jjv2kchnjaaddb1byjwim015m1z3qxh6lknqm0k5"; + sha256 = "1n4w7bfgy73vjzbvbphlwayy0dw73bbrayrpkqq8lbidg0x9lam8"; }; foundation = fetch { repo = "swift-corelibs-foundation"; - sha256 = "1bhrag63rmz41bg2g6ap01qrdpq37hislgf5hg6myy2v69q7mahx"; + sha256 = "1bfnkj8s3v327cy0czkngz0ryzmz7amjzkkxbsg2zyrhf9a9f0f7"; }; libdispatch = fetch { repo = "swift-corelibs-libdispatch"; - sha256 = "198vskbajch8s168a649qz5an92i2mxmmmzcjlgxlzh38fgxri0n"; + sha256 = "0fibrx54nbaawhsgd7cbr356ji9qvf8y8ahd5bdx28fpj6q0cnwc"; fetchSubmodules = true; }; swift = fetch { repo = "swift"; - sha256 = "1ydx11pkvaasgjbr29lnha0lpnak758gd5l0aqzmp3q6mcyvfm7a"; + sha256 = "0y277wi0m6zp1yph9s14mmc65m21q5fm6lgzkn2rkrbaz25fdzak"; }; }; @@ -111,7 +110,6 @@ let ncurses sqlite swig - # systemtap? ]; cmakeFlags = [ @@ -215,8 +213,11 @@ stdenv.mkDerivation rec { substituteInPlace swift/stdlib/public/Platform/CMakeLists.txt \ --replace '/usr/include' "${stdenv.cc.libc.dev}/include" + substituteInPlace swift-corelibs-libdispatch/src/CMakeLists.txt \ + --replace '/usr/include' "${stdenv.cc.libc.dev}/include" substituteInPlace swift/utils/build-script-impl \ --replace '/usr/include/c++' "${clang.cc.gcc}/include/c++" + patch -p1 -d swift -i ${./patches/glibc-arch-headers.patch} '' + stdenv.lib.optionalString stdenv.needsPax '' patch -p1 -d swift -i ${./patches/build-script-pax.patch} '' + '' @@ -228,24 +229,24 @@ stdenv.mkDerivation rec { -e 's/^test-installable-package$/# \0/' \ -e 's/^test$/# \0/' \ -e 's/^validation-test$/# \0/' \ - -e 's/^long-test$/# \0/' + -e 's/^long-test$/# \0/' \ + -e 's/^stress-test$/# \0/' \ + -e 's/^test-optimized$/# \0/' # https://bugs.swift.org/browse/SR-5779 sed -i -e 's|"-latomic"|"-Wl,-rpath,${clang.cc.gcc.lib}/lib" "-L${clang.cc.gcc.lib}/lib" "-latomic"|' swift/cmake/modules/AddSwift.cmake substituteInPlace clang/lib/Driver/ToolChains/Linux.cpp \ - --replace ' addPathIfExists(D, SysRoot + "/usr/lib", Paths);' \ - ' addPathIfExists(D, SysRoot + "/usr/lib", Paths); addPathIfExists(D, "${glibc}/lib", Paths);' + --replace 'SysRoot + "/usr/lib' '"${glibc}/lib" "' + patch -p1 -d clang -i ${./patches/llvm-include-dirs.patch} patch -p1 -d clang -i ${./purity.patch} # Workaround hardcoded dep on "libcurses" (vs "libncurses"): sed -i 's,curses,ncurses,' llbuild/*/*/CMakeLists.txt - # This test fails on one of my machines, not sure why. - # Disabling for now. - rm llbuild/tests/Examples/buildsystem-capi.llbuild - PREFIX=''${out/#\/} + substituteInPlace swift-corelibs-foundation/build.py \ + --replace usr/lib "$PREFIX/lib" substituteInPlace swift-corelibs-xctest/build_script.py \ --replace usr "$PREFIX" substituteInPlace swiftpm/Utilities/bootstrap \ @@ -263,6 +264,7 @@ stdenv.mkDerivation rec { # Extract the generated tarball into the store PREFIX=''${out/#\/} tar xf $INSTALLABLE_PACKAGE -C $out --strip-components=3 $PREFIX + find $out -type d -empty -delete paxmark pmr $out/bin/swift paxmark pmr $out/bin/* @@ -290,4 +292,3 @@ stdenv.mkDerivation rec { broken = stdenv.isAarch64; # 2018-09-04, never built on Hydra }; } - diff --git a/pkgs/development/compilers/swift/patches/0001-build-presets-linux-don-t-require-using-Ninja.patch b/pkgs/development/compilers/swift/patches/0001-build-presets-linux-don-t-require-using-Ninja.patch index 6ef83754a674..f2b30e5dcdb6 100644 --- a/pkgs/development/compilers/swift/patches/0001-build-presets-linux-don-t-require-using-Ninja.patch +++ b/pkgs/development/compilers/swift/patches/0001-build-presets-linux-don-t-require-using-Ninja.patch @@ -11,7 +11,7 @@ diff --git a/utils/build-presets.ini b/utils/build-presets.ini index 7ee57ad2df..e6b0af3581 100644 --- a/utils/build-presets.ini +++ b/utils/build-presets.ini -@@ -686,7 +686,7 @@ swiftpm +@@ -717,7 +717,7 @@ swiftpm xctest dash-dash diff --git a/pkgs/development/compilers/swift/patches/0002-build-presets-linux-allow-custom-install-prefix.patch b/pkgs/development/compilers/swift/patches/0002-build-presets-linux-allow-custom-install-prefix.patch index 66723f1cdf39..612b33cdb483 100644 --- a/pkgs/development/compilers/swift/patches/0002-build-presets-linux-allow-custom-install-prefix.patch +++ b/pkgs/development/compilers/swift/patches/0002-build-presets-linux-allow-custom-install-prefix.patch @@ -11,7 +11,7 @@ diff --git a/utils/build-presets.ini b/utils/build-presets.ini index e6b0af3581..1095cbaab7 100644 --- a/utils/build-presets.ini +++ b/utils/build-presets.ini -@@ -708,7 +708,7 @@ install-lldb +@@ -723,7 +723,7 @@ install-lldb install-llbuild install-swiftpm install-xctest diff --git a/pkgs/development/compilers/swift/patches/0004-build-presets-linux-plumb-extra-cmake-options.patch b/pkgs/development/compilers/swift/patches/0004-build-presets-linux-plumb-extra-cmake-options.patch index 5493196303cd..e84c7eb2a08a 100644 --- a/pkgs/development/compilers/swift/patches/0004-build-presets-linux-plumb-extra-cmake-options.patch +++ b/pkgs/development/compilers/swift/patches/0004-build-presets-linux-plumb-extra-cmake-options.patch @@ -11,7 +11,7 @@ diff --git a/utils/build-presets.ini b/utils/build-presets.ini index 1739e91dc2..0608fed9c1 100644 --- a/utils/build-presets.ini +++ b/utils/build-presets.ini -@@ -708,6 +708,8 @@ install-destdir=%(install_destdir)s +@@ -740,6 +740,8 @@ install-destdir=%(install_destdir)s # Path to the .tar.gz package we would create. installable-package=%(installable_package)s diff --git a/pkgs/development/compilers/swift/patches/build-script-pax.patch b/pkgs/development/compilers/swift/patches/build-script-pax.patch index fa2ccdf9d5c6..1f47bf8ee045 100644 --- a/pkgs/development/compilers/swift/patches/build-script-pax.patch +++ b/pkgs/development/compilers/swift/patches/build-script-pax.patch @@ -1,6 +1,6 @@ --- swift/utils/build-script-impl 2017-01-23 12:47:20.401326309 -0600 +++ swift-pax/utils/build-script-impl 2017-01-23 13:24:10.339366996 -0600 -@@ -1823,6 +1823,17 @@ function set_lldb_xcodebuild_options() { +@@ -1837,6 +1837,17 @@ function set_lldb_xcodebuild_options() { fi } @@ -18,7 +18,7 @@ # # Configure and build each product # -@@ -2624,6 +2634,12 @@ for host in "${ALL_HOSTS[@]}"; do +@@ -2735,6 +2746,12 @@ for host in "${ALL_HOSTS[@]}"; do fi call "${CMAKE_BUILD[@]}" "${build_dir}" $(cmake_config_opt ${product}) -- "${BUILD_ARGS[@]}" ${build_targets[@]} diff --git a/pkgs/development/compilers/swift/patches/glibc-arch-headers.patch b/pkgs/development/compilers/swift/patches/glibc-arch-headers.patch new file mode 100644 index 000000000000..650e1a2429d4 --- /dev/null +++ b/pkgs/development/compilers/swift/patches/glibc-arch-headers.patch @@ -0,0 +1,13 @@ +The Nix glibc headers do not use include/x86_64-linux-gnu subdirectories. + +--- swift/stdlib/public/Platform/CMakeLists.txt 2018-09-30 17:51:51.581766303 +0200 ++++ swift/stdlib/public/Platform/CMakeLists.txt 2018-09-30 18:40:04.118956708 +0200 +@@ -65,7 +65,7 @@ + endif() + + set(GLIBC_INCLUDE_PATH "${GLIBC_SYSROOT_RELATIVE_INCLUDE_PATH}") +- set(GLIBC_ARCH_INCLUDE_PATH "${GLIBC_SYSROOT_RELATIVE_ARCH_INCLUDE_PATH}") ++ set(GLIBC_ARCH_INCLUDE_PATH "${GLIBC_SYSROOT_RELATIVE_INCLUDE_PATH}") + + if(NOT "${SWIFT_SDK_${sdk}_ARCH_${arch}_PATH}" STREQUAL "/") + set(GLIBC_INCLUDE_PATH "${SWIFT_SDK_${sdk}_ARCH_${arch}_PATH}${GLIBC_INCLUDE_PATH}") diff --git a/pkgs/development/compilers/swift/patches/llvm-include-dirs.patch b/pkgs/development/compilers/swift/patches/llvm-include-dirs.patch new file mode 100644 index 000000000000..9523943c4801 --- /dev/null +++ b/pkgs/development/compilers/swift/patches/llvm-include-dirs.patch @@ -0,0 +1,13 @@ +Only use the Nix include dirs when no sysroot is configured. + +--- clang/lib/Driver/ToolChains/Linux.cpp 2018-10-05 18:01:15.731109551 +0200 ++++ clang/lib/Driver/ToolChains/Linux.cpp 2018-10-05 18:00:27.959509924 +0200 +@@ -565,7 +565,7 @@ + + // Check for configure-time C include directories. + StringRef CIncludeDirs(C_INCLUDE_DIRS); +- if (CIncludeDirs != "") { ++ if (CIncludeDirs != "" && (SysRoot.empty() || SysRoot == "/")) { + SmallVector<StringRef, 5> dirs; + CIncludeDirs.split(dirs, ":"); + for (StringRef dir : dirs) { diff --git a/pkgs/development/compilers/swift/purity.patch b/pkgs/development/compilers/swift/purity.patch index b30d0d0b5d5b..d10e407260a5 100644 --- a/pkgs/development/compilers/swift/purity.patch +++ b/pkgs/development/compilers/swift/purity.patch @@ -11,7 +11,7 @@ diff --git a/lib/Driver/ToolChains/Gnu.cpp b/lib/Driver/ToolChains/Gnu.cpp index fe3c0191bb..c6a482bece 100644 --- a/lib/Driver/ToolChains/Gnu.cpp +++ b/lib/Driver/ToolChains/Gnu.cpp -@@ -494,13 +494,6 @@ void tools::gnutools::Linker::ConstructJob(Compilation &C, const JobAction &JA, +@@ -398,13 +398,6 @@ void tools::gnutools::Linker::ConstructJob(Compilation &C, const JobAction &JA, if (!Args.hasArg(options::OPT_static)) { if (Args.hasArg(options::OPT_rdynamic)) CmdArgs.push_back("-export-dynamic"); diff --git a/pkgs/development/compilers/x11basic/default.nix b/pkgs/development/compilers/x11basic/default.nix new file mode 100644 index 000000000000..a26bc41c5945 --- /dev/null +++ b/pkgs/development/compilers/x11basic/default.nix @@ -0,0 +1,48 @@ +{ stdenv, lib, fetchFromGitHub +, automake, autoconf, readline +, libX11, bluez, SDL2 +}: + +stdenv.mkDerivation rec { + pname = "X11basic"; + version = "1.26"; + name = pname + "-" + version; + + src = fetchFromGitHub { + owner = "kollokollo"; + repo = pname; + rev = version; + sha256 = "0rwj9cf496xailply0rgw695bzdladh2dhy7vdqac1pwbkl53nvd"; + }; + + buildInputs = [ + autoconf automake readline libX11 SDL2 bluez + ]; + + preConfigure = "cd src;autoconf"; + + configureFlags = [ + "--with-bluetooth" + "--with-usb" + "--with-readline" + "--with-sdl" + "--with-x" + "--enable-cryptography" + ]; + + preInstall = '' + touch x11basic.{eps,svg} + mkdir -p $out/{bin,lib} + mkdir -p $out/share/{applications,icons/hicolor/scalable/apps} + cp -r ../examples $out/share/. + ''; + + meta = with stdenv.lib; { + homepage = http://x11-basic.sourceforge.net/; + description = "A Basic interpreter and compiler with graphics capabilities."; + license = licenses.gpl2; + maintainers = with maintainers; [ edwtjo ]; + platforms = platforms.unix; + }; + +} diff --git a/pkgs/development/coq-modules/autosubst/default.nix b/pkgs/development/coq-modules/autosubst/default.nix index 9c24e77e0f78..bffa5172b0e4 100644 --- a/pkgs/development/coq-modules/autosubst/default.nix +++ b/pkgs/development/coq-modules/autosubst/default.nix @@ -11,6 +11,7 @@ stdenv.mkDerivation rec { sha256 = "06pcjbngzwqyncvfwzz88j33wvdj9kizxyg5adp7y6186h8an341"; }; + buildInputs = [ coq ]; propagatedBuildInputs = [ mathcomp ]; patches = [./0001-changes-to-work-with-Coq-8.6.patch]; diff --git a/pkgs/development/coq-modules/contribs/default.nix b/pkgs/development/coq-modules/contribs/default.nix index d12d3fefb944..a1ecdd610a3e 100644 --- a/pkgs/development/coq-modules/contribs/default.nix +++ b/pkgs/development/coq-modules/contribs/default.nix @@ -1018,7 +1018,7 @@ let mkContrib = repo: revs: param: sha256 = "0fp3vdl79c8d759qjhk42rjfpkd0ba4pcw572f5gxn28kfwz3rrj"; }; - zfc = mkContrib "zfc" [ "8.5" "8.6" "8.7" ] { + zfc = mkContrib "zfc" [ "8.5" "8.6" "8.7" "8.8" ] { version = "v8.5.0-5-gbba3259"; rev = "bba325933370fea64780b1afa2fad54c1b567819"; sha256 = "0iwkpmc22nwasrk4g7ki4s5y05zjs7kmqk3j98giwp2wiavhgapn"; diff --git a/pkgs/development/coq-modules/fiat/HEAD.nix b/pkgs/development/coq-modules/fiat/HEAD.nix index a064064fd919..4abaec6528a9 100644 --- a/pkgs/development/coq-modules/fiat/HEAD.nix +++ b/pkgs/development/coq-modules/fiat/HEAD.nix @@ -11,8 +11,9 @@ stdenv.mkDerivation rec { sha256 = "0griqc675yylf9rvadlfsabz41qy5f5idya30p5rv6ysiakxya64"; }; - buildInputs = with coq.ocamlPackages; [ ocaml camlp5 python27 ]; - propagatedBuildInputs = [ coq ]; + buildInputs = [ coq python27 ] ++ (with coq.ocamlPackages; [ ocaml camlp5 ]); + + prePatch = "patchShebangs etc/coq-scripts"; doCheck = false; diff --git a/pkgs/development/coq-modules/mathcomp/default.nix b/pkgs/development/coq-modules/mathcomp/default.nix index 92c3c87774ab..1e5b6b7bf666 100644 --- a/pkgs/development/coq-modules/mathcomp/default.nix +++ b/pkgs/development/coq-modules/mathcomp/default.nix @@ -1,29 +1,65 @@ -{ callPackage, fetchurl, coq }: +{ stdenv, fetchFromGitHub, coq, ncurses, which +, graphviz, withDoc ? false +}: let param = - let param_1_7 = { - version = "1.7.0"; - sha256 = "05zgyi4wmasi1rcyn5jq42w0bi9713q9m8dl1fdgl66nmacixh39"; - }; in - + if stdenv.lib.versionAtLeast coq.coq-version "8.6" then + { + version = "1.7.0"; + sha256 = "0wnhj9nqpx2bw6n1l4i8jgrw3pjajvckvj3lr4vzjb3my2lbxdd1"; + } + else if stdenv.lib.versionAtLeast coq.coq-version "8.5" then { - "8.5" = { - version = "1.6.1"; - sha256 = "1j9ylggjzrxz1i2hdl2yhsvmvy5z6l4rprwx7604401080p5sgjw"; - }; - - "8.6" = param_1_7; - "8.7" = param_1_7; - "8.8" = param_1_7; - - }."${coq.coq-version}" -; in - -callPackage ./generic.nix { - name = "coq${coq.coq-version}-mathcomp-${param.version}"; - src = fetchurl { - url = "https://github.com/math-comp/math-comp/archive/mathcomp-${param.version}.tar.gz"; + version = "1.6.1"; + sha256 = "1ilw6vm4dlsdv9cd7kmf0vfrh2kkzr45wrqr8m37miy0byzr4p9i"; + } + else throw "No version of math-comp is available for Coq ${coq.coq-version}"; + +in + +stdenv.mkDerivation rec { + name = "coq${coq.coq-version}-mathcomp-${version}"; + + # used in ssreflect + inherit (param) version; + + src = fetchFromGitHub { + owner = "math-comp"; + repo = "math-comp"; + rev = "mathcomp-${param.version}"; inherit (param) sha256; }; + + nativeBuildInputs = stdenv.lib.optionals withDoc [ graphviz ]; + buildInputs = [ coq ncurses which ] ++ (with coq.ocamlPackages; [ ocaml findlib camlp5 ]); + + enableParallelBuilding = true; + + buildFlags = stdenv.lib.optionalString withDoc "doc"; + + COQBIN = "${coq}/bin/"; + + preBuild = '' + patchShebangs etc/utils/ssrcoqdep || true + cd mathcomp + ''; + + installPhase = '' + make -f Makefile.coq COQLIB=$out/lib/coq/${coq.coq-version}/ install + '' + stdenv.lib.optionalString withDoc '' + make -f Makefile.coq install-doc DOCDIR=$out/share/coq/${coq.coq-version}/ + ''; + + meta = with stdenv.lib; { + homepage = http://ssr.msr-inria.inria.fr/; + license = licenses.cecill-b; + maintainers = [ maintainers.vbgl maintainers.jwiegley ]; + platforms = coq.meta.platforms; + }; + + passthru = { + compatibleCoqVersions = v: stdenv.lib.versionAtLeast v "8.5"; + }; + } diff --git a/pkgs/development/coq-modules/mathcomp/generic.nix b/pkgs/development/coq-modules/mathcomp/generic.nix deleted file mode 100644 index 2a602711965f..000000000000 --- a/pkgs/development/coq-modules/mathcomp/generic.nix +++ /dev/null @@ -1,42 +0,0 @@ -{ stdenv, coq, ncurses, which -, graphviz, withDoc ? false -, src, name -}: - -stdenv.mkDerivation { - - inherit name; - inherit src; - - nativeBuildInputs = stdenv.lib.optionals withDoc [ graphviz ]; - buildInputs = with coq.ocamlPackages; [ ocaml findlib camlp5 ncurses which ]; - propagatedBuildInputs = [ coq ]; - - enableParallelBuilding = true; - - buildFlags = stdenv.lib.optionalString withDoc "doc"; - - preBuild = '' - patchShebangs etc/utils/ssrcoqdep || true - cd mathcomp - export COQBIN=${coq}/bin/ - ''; - - installPhase = '' - make -f Makefile.coq COQLIB=$out/lib/coq/${coq.coq-version}/ install - '' + stdenv.lib.optionalString withDoc '' - make -f Makefile.coq install-doc DOCDIR=$out/share/coq/${coq.coq-version}/ - ''; - - meta = with stdenv.lib; { - homepage = http://ssr.msr-inria.inria.fr/; - license = licenses.cecill-b; - maintainers = [ maintainers.vbgl maintainers.jwiegley ]; - platforms = coq.meta.platforms; - }; - - passthru = { - compatibleCoqVersions = v: builtins.elem v [ "8.5" "8.6" "8.7" "8.8" ]; - }; - -} diff --git a/pkgs/development/coq-modules/ssreflect/default.nix b/pkgs/development/coq-modules/ssreflect/default.nix index 9e9c3c7957aa..1fcb7e2da8ae 100644 --- a/pkgs/development/coq-modules/ssreflect/default.nix +++ b/pkgs/development/coq-modules/ssreflect/default.nix @@ -1,29 +1,32 @@ -{ callPackage, fetchurl, coq }: - -let param = - - let param_1_7 = { - version = "1.7.0"; - sha256 = "05zgyi4wmasi1rcyn5jq42w0bi9713q9m8dl1fdgl66nmacixh39"; - }; in - - { - "8.5" = { - version = "1.6.1"; - sha256 = "1j9ylggjzrxz1i2hdl2yhsvmvy5z6l4rprwx7604401080p5sgjw"; - }; - - "8.6" = param_1_7; - "8.7" = param_1_7; - "8.8" = param_1_7; - - }."${coq.coq-version}" -; in - -callPackage ./generic.nix { - name = "coq${coq.coq-version}-ssreflect-${param.version}"; - src = fetchurl { - url = "https://github.com/math-comp/math-comp/archive/mathcomp-${param.version}.tar.gz"; - inherit (param) sha256; - }; +{ stdenv, fetchFromGitHub, coq, ncurses, which +, graphviz, mathcomp, withDoc ? false +}: + +stdenv.mkDerivation rec { + name = "coq${coq.coq-version}-ssreflect-${version}"; + + inherit (mathcomp) src version meta; + + nativeBuildInputs = stdenv.lib.optionals withDoc [ graphviz ]; + buildInputs = [ coq ncurses which ] ++ (with coq.ocamlPackages; [ ocaml findlib camlp5 ]); + + enableParallelBuilding = true; + + COQBIN = "${coq}/bin/"; + + preBuild = '' + patchShebangs etc/utils/ssrcoqdep || true + cd mathcomp/ssreflect + ''; + + installPhase = '' + make -f Makefile.coq COQLIB=$out/lib/coq/${coq.coq-version}/ install + ''; + + postInstall = stdenv.lib.optionalString withDoc '' + mkdir -p $out/share/doc/coq/${coq.coq-version}/user-contrib/mathcomp/ssreflect/ + cp -r html $out/share/doc/coq/${coq.coq-version}/user-contrib/mathcomp/ssreflect/ + ''; + + passthru.compatibleCoqVersions = mathcomp.compatibleCoqVersions; } diff --git a/pkgs/development/coq-modules/ssreflect/generic.nix b/pkgs/development/coq-modules/ssreflect/generic.nix deleted file mode 100644 index 23e364cd960d..000000000000 --- a/pkgs/development/coq-modules/ssreflect/generic.nix +++ /dev/null @@ -1,49 +0,0 @@ -{ stdenv, coq, ncurses, which -, graphviz, withDoc ? false -, src, name, patches ? [] -}: - -stdenv.mkDerivation { - - inherit name; - inherit src; - - nativeBuildInputs = stdenv.lib.optionals withDoc [ graphviz ]; - buildInputs = with coq.ocamlPackages; [ ocaml findlib camlp5 ncurses which ]; - propagatedBuildInputs = [ coq ]; - - enableParallelBuilding = true; - - inherit patches; - - preBuild = '' - patchShebangs etc/utils/ssrcoqdep || true - cd mathcomp/ssreflect - export COQBIN=${coq}/bin/ - ''; - - installPhase = '' - make -f Makefile.coq COQLIB=$out/lib/coq/${coq.coq-version}/ install - ''; - - postInstall = '' - # mkdir -p $out/bin - # cp -p bin/ssrcoq $out/bin - # cp -p bin/ssrcoq.byte $out/bin - '' + stdenv.lib.optionalString withDoc '' - mkdir -p $out/share/doc/coq/${coq.coq-version}/user-contrib/mathcomp/ssreflect/ - cp -r html $out/share/doc/coq/${coq.coq-version}/user-contrib/mathcomp/ssreflect/ - ''; - - meta = with stdenv.lib; { - homepage = http://ssr.msr-inria.inria.fr/; - license = licenses.cecill-b; - maintainers = with maintainers; [ vbgl jwiegley ]; - platforms = coq.meta.platforms; - }; - - passthru = { - compatibleCoqVersions = v: builtins.elem v [ "8.5" "8.6" "8.7" "8.8" ]; - }; - -} diff --git a/pkgs/development/dhall-modules/default.nix b/pkgs/development/dhall-modules/default.nix new file mode 100644 index 000000000000..b6632a86f31f --- /dev/null +++ b/pkgs/development/dhall-modules/default.nix @@ -0,0 +1,9 @@ +{ pkgs }: + +# TODO: add into the toplevel fixpoint instead of using rec +rec { + + prelude = prelude_3_0_0; + prelude_3_0_0 = pkgs.callPackage ./prelude/v3.nix {}; + +} diff --git a/pkgs/development/dhall-modules/prelude/v3.nix b/pkgs/development/dhall-modules/prelude/v3.nix new file mode 100644 index 000000000000..ef673310ceb0 --- /dev/null +++ b/pkgs/development/dhall-modules/prelude/v3.nix @@ -0,0 +1,25 @@ +{ stdenv, lib, fetchFromGitHub }: + +stdenv.mkDerivation { + name = "dhall-prelude"; + + src = fetchFromGitHub { + owner = "dhall-lang"; + repo = "dhall-lang"; + # Commit where the v3.0.0 prelude folder was merged into dhall-lang + # and a LICENSE file has been added. + rev = "f6aa9399f1ac831d66c34104abe6856023c5b2df"; + sha256 = "0kqjgh3y1l3cb3rj381j7c09547g1vh2dsfzpm08y1qajhhf9vgf"; + }; + + phases = [ "unpackPhase" "installPhase" ]; + + installPhase = '' + cp -r Prelude $out + ''; + + meta = { + license = lib.licenses.bsd3; + maintainers = with lib.maintainers; [ Profpatsch ]; + }; +} diff --git a/pkgs/development/go-modules/generic/default.nix b/pkgs/development/go-modules/generic/default.nix index 3faa4c268ac0..0e092473bd52 100644 --- a/pkgs/development/go-modules/generic/default.nix +++ b/pkgs/development/go-modules/generic/default.nix @@ -103,6 +103,7 @@ go.stdenv.mkDerivation ( '') + '' export GOPATH=$NIX_BUILD_TOP/go:$GOPATH + export GOCACHE=$TMPDIR/go-cache runHook postConfigure ''; @@ -193,9 +194,6 @@ go.stdenv.mkDerivation ( find $bin/bin -type f -exec ${removeExpr removeReferences} '{}' + || true ''; - # Disable go cache, which is not reused in nix anyway - GOCACHE = "off"; - shellHook = '' d=$(mktemp -d "--suffix=-$name") '' + toString (map (dep: '' diff --git a/pkgs/development/haskell-modules/configuration-common.nix b/pkgs/development/haskell-modules/configuration-common.nix index 33f498d922b0..175551530026 100644 --- a/pkgs/development/haskell-modules/configuration-common.nix +++ b/pkgs/development/haskell-modules/configuration-common.nix @@ -86,7 +86,7 @@ self: super: { name = "git-annex-${super.git-annex.version}-src"; url = "git://git-annex.branchable.com/"; rev = "refs/tags/" + super.git-annex.version; - sha256 = "069w4gdb104lc3vp48k3wywmgql56yc5g2g2i240xrr88in3qvqw"; + sha256 = "0dnrihpdshrldais74jm5wjfw650i4va8znc1k2zq8gl9p4i8p39"; }; }).override { dbus = if pkgs.stdenv.isLinux then self.dbus else null; @@ -370,6 +370,7 @@ self: super: { safecopy = dontCheck super.safecopy; sai-shape-syb = dontCheck super.sai-shape-syb; scp-streams = dontCheck super.scp-streams; + sdl2 = dontCheck super.sdl2; # the test suite needs an x server sdl2-ttf = dontCheck super.sdl2-ttf; # as of version 0.2.1, the test suite requires user intervention separated = dontCheck super.separated; shadowsocks = dontCheck super.shadowsocks; @@ -1064,11 +1065,11 @@ self: super: { # The tool needs a newer hpack version than the one mandated by LTS-12.x. cabal2nix = super.cabal2nix.overrideScope (self: super: { - hpack = self.hpack_0_31_0; + hpack = self.hpack_0_31_1; yaml = self.yaml_0_11_0_0; }); stack2nix = super.stack2nix.overrideScope (self: super: { - hpack = self.hpack_0_31_0; + hpack = self.hpack_0_31_1; yaml = self.yaml_0_11_0_0; }); @@ -1150,4 +1151,7 @@ self: super: { # https://github.com/danfran/cabal-macosx/issues/13 cabal-macosx = dontCheck super.cabal-macosx; + # https://github.com/DanielG/cabal-helper/issues/59 + cabal-helper = doJailbreak super.cabal-helper; + } // import ./configuration-tensorflow.nix {inherit pkgs haskellLib;} self super diff --git a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix b/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix deleted file mode 100644 index 85efecc8ed3b..000000000000 --- a/pkgs/development/haskell-modules/configuration-ghc-7.10.x.nix +++ /dev/null @@ -1,239 +0,0 @@ -{ pkgs, haskellLib }: - -with haskellLib; - -self: super: { - - # Suitable LLVM version. - llvmPackages = pkgs.llvmPackages_35; - - # Disable GHC 7.10.x core libraries. - array = null; - base = null; - binary = null; - bin-package-db = null; - bytestring = null; - Cabal = null; - containers = null; - deepseq = null; - directory = null; - filepath = null; - ghc-boot = null; - ghc-boot-th = null; - ghc-prim = null; - ghci = null; - haskeline = null; - hoopl = null; - hpc = null; - integer-gmp = null; - pretty = null; - process = null; - rts = null; - template-haskell = null; - terminfo = null; - time = null; - transformers = null; - unix = null; - xhtml = null; - - # These are now core libraries in GHC 8.4.x. - mtl = self.mtl_2_2_2; - parsec = self.parsec_3_1_13_0; - parsec_3_1_13_0 = addBuildDepends super.parsec_3_1_13_0 [self.fail self.semigroups]; - stm = self.stm_2_5_0_0; - text = self.text_1_2_3_1; - - # Build jailbreak-cabal with the latest version of Cabal. - jailbreak-cabal = super.jailbreak-cabal.override { Cabal = self.Cabal_1_24_2_0; }; - - gtk2hs-buildtools = super.gtk2hs-buildtools.override { Cabal = self.buildHaskellPackages.Cabal_1_24_2_0; }; - - # https://github.com/mrkkrp/megaparsec/issues/282 - megaparsec = addBuildDepend (dontCheck super.megaparsec) self.fail; - - Extra = appendPatch super.Extra (pkgs.fetchpatch { - url = "https://github.com/seereason/sr-extra/commit/29787ad4c20c962924b823d02a7335da98143603.patch"; - sha256 = "193i1xmq6z0jalwmq0mhqk1khz6zz0i1hs6lgfd7ybd6qyaqnf5f"; - }); - - # Requires ghc 8.2 - ghc-proofs = dontDistribute super.ghc-proofs; - - # haddock: No input file(s). - nats = dontHaddock super.nats; - bytestring-builder = dontHaddock super.bytestring-builder; - - # Setup: At least the following dependencies are missing: base <4.8 - hspec-expectations = overrideCabal super.hspec-expectations (drv: { - postPatch = "sed -i -e 's|base < 4.8|base|' hspec-expectations.cabal"; - }); - utf8-string = overrideCabal super.utf8-string (drv: { - postPatch = "sed -i -e 's|base >= 3 && < 4.8|base|' utf8-string.cabal"; - }); - - # acid-state/safecopy#25 acid-state/safecopy#26 - safecopy = dontCheck (super.safecopy); - - # test suite broken, some instance is declared twice. - # https://bitbucket.org/FlorianHartwig/attobencode/issue/1 - AttoBencode = dontCheck super.AttoBencode; - - # Test suite fails with some (seemingly harmless) error. - # https://code.google.com/p/scrapyourboilerplate/issues/detail?id=24 - syb = dontCheck super.syb; - - # Test suite has stricter version bounds - retry = dontCheck super.retry; - - # test/System/Posix/Types/OrphansSpec.hs:19:13: - # Not in scope: type constructor or class ‘Int32’ - base-orphans = dontCheck super.base-orphans; - - # Test suite fails with time >= 1.5 - http-date = dontCheck super.http-date; - - # Version 1.19.5 fails its test suite. - happy = dontCheck super.happy; - - # Upstream was notified about the over-specified constraint on 'base' - # but refused to do anything about it because he "doesn't want to - # support a moving target". Go figure. - barecheck = doJailbreak super.barecheck; - - # https://github.com/kazu-yamamoto/unix-time/issues/30 - unix-time = dontCheck super.unix-time; - - # diagrams/monoid-extras#19 - monoid-extras = overrideCabal super.monoid-extras (drv: { - prePatch = "sed -i 's|4\.8|4.9|' monoid-extras.cabal"; - }); - - # diagrams/statestack#5 - statestack = overrideCabal super.statestack (drv: { - prePatch = "sed -i 's|4\.8|4.9|' statestack.cabal"; - }); - - # diagrams/diagrams-core#83 - diagrams-core = overrideCabal super.diagrams-core (drv: { - prePatch = "sed -i 's|4\.8|4.9|' diagrams-core.cabal"; - }); - - timezone-olson = doJailbreak super.timezone-olson; - xmonad-extras = overrideCabal super.xmonad-extras (drv: { - postPatch = '' - sed -i -e "s,<\*,<¤,g" XMonad/Actions/Volume.hs - ''; - }); - - # Workaround for a workaround, see comment for "ghcjs" flag. - jsaddle = let jsaddle' = disableCabalFlag super.jsaddle "ghcjs"; - in addBuildDepends jsaddle' [ self.glib self.gtk3 self.webkitgtk3 - self.webkitgtk3-javascriptcore ]; - - # https://github.com/lymar/hastache/issues/47 - hastache = dontCheck super.hastache; - - # The compat library is empty in the presence of mtl 2.2.x. - mtl-compat = dontHaddock super.mtl-compat; - - # https://github.com/bos/bloomfilter/issues/11 - bloomfilter = dontHaddock (appendConfigureFlag super.bloomfilter "--ghc-option=-XFlexibleContexts"); - - # https://github.com/ocharles/tasty-rerun/issues/5 - tasty-rerun = dontHaddock (appendConfigureFlag super.tasty-rerun "--ghc-option=-XFlexibleContexts"); - - # http://hub.darcs.net/ivanm/graphviz/issue/5 - graphviz = dontCheck (appendPatch super.graphviz ./patches/graphviz-fix-ghc710.patch); - - # https://github.com/HugoDaniel/RFC3339/issues/14 - timerep = dontCheck super.timerep; - - # Required to fix version 0.91.0.0. - wx = dontHaddock (appendConfigureFlag super.wx "--ghc-option=-XFlexibleContexts"); - - # Inexplicable haddock failure - # https://github.com/gregwebs/aeson-applicative/issues/2 - aeson-applicative = dontHaddock super.aeson-applicative; - - # GHC 7.10.1 is affected by https://github.com/srijs/hwsl2/issues/1. - hwsl2 = dontCheck super.hwsl2; - - # https://github.com/haskell/haddock/issues/427 - haddock = dontCheck self.haddock_2_16_1; - - # haddock-api >= 2.17 is GHC 8.0 only - haddock-api = self.haddock-api_2_16_1; - haddock-library = self.haddock-library_1_2_1; - - # The tests in vty-ui do not build, but vty-ui itself builds. - vty-ui = enableCabalFlag super.vty-ui "no-tests"; - - # https://github.com/fpco/stackage/issues/1112 - vector-algorithms = addBuildDepends (dontCheck super.vector-algorithms) [ self.mtl self.mwc-random ]; - - # vector with ghc < 8.0 needs semigroups - vector = addBuildDepend super.vector self.semigroups; - - # too strict dependency on directory - tasty-ant-xml = doJailbreak super.tasty-ant-xml; - - # https://github.com/thoughtpolice/hs-ed25519/issues/13 - ed25519 = dontCheck super.ed25519; - - # Breaks a dependency cycle between QuickCheck and semigroups - hashable = dontCheck super.hashable; - unordered-containers = dontCheck super.unordered-containers; - - # GHC versions prior to 8.x require additional build inputs. - aeson = disableCabalFlag (addBuildDepend super.aeson self.semigroups) "old-locale"; - ansi-wl-pprint = addBuildDepend super.ansi-wl-pprint self.semigroups; - attoparsec = addBuildDepends super.attoparsec (with self; [semigroups fail]); - bytes = addBuildDepend super.bytes self.doctest; - case-insensitive = addBuildDepend super.case-insensitive self.semigroups; - cmdargs = addBuildDepend super.cmdargs self.semigroups; - contravariant = addBuildDepend super.contravariant self.semigroups; - dependent-map = addBuildDepend super.dependent-map self.semigroups; - distributive = addBuildDepend (dontCheck super.distributive) self.semigroups; - Glob = addBuildDepends super.Glob (with self; [semigroups]); - hoauth2 = overrideCabal super.hoauth2 (drv: { testDepends = (drv.testDepends or []) ++ [ self.wai self.warp ]; }); - hslogger = addBuildDepend super.hslogger self.HUnit; - intervals = addBuildDepends super.intervals (with self; [doctest QuickCheck]); - lens = addBuildDepend super.lens self.generic-deriving; - mono-traversable = addBuildDepend super.mono-traversable self.semigroups; - natural-transformation = addBuildDepend super.natural-transformation self.semigroups; - optparse-applicative = addBuildDepends super.optparse-applicative [self.semigroups self.fail]; - parser-combinators = addBuildDepend super.parser-combinators self.semigroups; - QuickCheck = addBuildDepend super.QuickCheck self.semigroups; - reflection = addBuildDepend super.reflection self.semigroups; - semigroups = addBuildDepends (dontCheck super.semigroups) (with self; [hashable tagged text unordered-containers]); - tar = addBuildDepend super.tar self.semigroups; - texmath = addBuildDepend super.texmath self.network-uri; - yesod-auth-oauth2 = overrideCabal super.yesod-auth-oauth2 (drv: { testDepends = (drv.testDepends or []) ++ [ self.load-env self.yesod ]; }); - - # cereal must have `fail` in pre-ghc-8.0.x versions and tests require - # bytestring>=0.10.8.1. - cereal = dontCheck (addBuildDepend super.cereal self.fail); - - # The test suite requires Cabal 1.24.x or later to compile. - comonad = dontCheck super.comonad; - semigroupoids = dontCheck super.semigroupoids; - - # Newer versions require base >=4.9 && <5. - colour = self.colour_2_3_3; - - # https://github.com/atzedijkstra/chr/issues/1 - chr-pretty = doJailbreak super.chr-pretty; - chr-parse = doJailbreak super.chr-parse; - - # The autogenerated Nix expressions don't take into - # account `if impl(ghc >= x.y)`, which is a common method to depend - # on `semigroups` or `fail` when building with GHC < 8.0. - system-filepath = addBuildDepend super.system-filepath self.semigroups; - haskell-src-exts = addBuildDepend super.haskell-src-exts self.semigroups; - free = addBuildDepend super.free self.fail; - - # Newer versions don't build without base-4.9 - resourcet = self.resourcet_1_1_11; - conduit = self.conduit_1_2_13_1; - -} diff --git a/pkgs/development/haskell-modules/configuration-ghc-8.0.x.nix b/pkgs/development/haskell-modules/configuration-ghc-8.0.x.nix deleted file mode 100644 index 43f769ff6fd5..000000000000 --- a/pkgs/development/haskell-modules/configuration-ghc-8.0.x.nix +++ /dev/null @@ -1,91 +0,0 @@ -{ pkgs, haskellLib }: - -with haskellLib; - -self: super: { - - # Suitable LLVM version. - llvmPackages = pkgs.llvmPackages_37; - - # Disable GHC 8.0.x core libraries. - array = null; - base = null; - binary = null; - bytestring = null; - Cabal = null; - containers = null; - deepseq = null; - directory = null; - filepath = null; - ghc-boot = null; - ghc-boot-th = null; - ghc-compact = null; - ghc-prim = null; - ghci = null; - haskeline = null; - hoopl = null; - hpc = null; - integer-gmp = null; - pretty = null; - process = null; - rts = null; - template-haskell = null; - terminfo = null; - time = null; - transformers = null; - unix = null; - xhtml = null; - - # These are now core libraries in GHC 8.4.x. - mtl = self.mtl_2_2_2; - parsec = self.parsec_3_1_13_0; - stm = self.stm_2_5_0_0; - text = self.text_1_2_3_1; - - # https://github.com/bmillwood/applicative-quoters/issues/6 - applicative-quoters = appendPatch super.applicative-quoters (pkgs.fetchpatch { - url = "https://patch-diff.githubusercontent.com/raw/bmillwood/applicative-quoters/pull/7.patch"; - sha256 = "026vv2k3ks73jngwifszv8l59clg88pcdr4mz0wr0gamivkfa1zy"; - }); - - # Requires ghc 8.2 - ghc-proofs = dontDistribute super.ghc-proofs; - - # https://github.com/thoughtbot/yesod-auth-oauth2/pull/77 - yesod-auth-oauth2 = doJailbreak super.yesod-auth-oauth2; - - # https://github.com/nominolo/ghc-syb/issues/20 - ghc-syb-utils = dontCheck super.ghc-syb-utils; - - # Newer versions require ghc>=8.2 - apply-refact = super.apply-refact_0_3_0_1; - - # This builds needs the latest Cabal version. - cabal2nix = super.cabal2nix.overrideScope (self: super: { Cabal = self.Cabal_2_0_1_1; }); - - # Add appropriate Cabal library to build this code. - stack = addSetupDepend super.stack self.Cabal_2_0_1_1; - - # inline-c > 0.5.6.0 requires template-haskell >= 2.12 - inline-c = super.inline-c_0_5_6_1; - inline-c-cpp = super.inline-c-cpp_0_1_0_0; - - # test dep hedgehog pulls in concurrent-output, which does not build - # due to processing version mismatch - either = dontCheck super.either; - - # test dep tasty has a version mismatch - indents = dontCheck super.indents; - - # Newer versions require GHC 8.2. - haddock-library = self.haddock-library_1_4_3; - haddock-api = self.haddock-api_2_17_4; - haddock = self.haddock_2_17_5; - - # GHC 8.0 doesn't have semigroups included by default - ListLike = addBuildDepend super.ListLike self.semigroups; - - # Add missing build depedency for this compiler. - base-compat-batteries = addBuildDepend super.base-compat-batteries self.bifunctors; - -} diff --git a/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix b/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix index 213651405f35..226b437d58b1 100644 --- a/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix +++ b/pkgs/development/haskell-modules/configuration-ghc-8.4.x.nix @@ -63,11 +63,11 @@ self: super: { # more verbose but friendlier for Hydra. stack = (doJailbreak super.stack).override { Cabal = self.Cabal_2_4_0_1; - hpack = self.hpack_0_31_0.override { Cabal = self.Cabal_2_4_0_1; }; + hpack = self.hpack_0_31_1.override { Cabal = self.Cabal_2_4_0_1; }; yaml = self.yaml_0_11_0_0; hackage-security = self.hackage-security.override { Cabal = self.Cabal_2_4_0_1; }; }; - hpack_0_31_0 = super.hpack_0_31_0.override { + hpack_0_31_1 = super.hpack_0_31_1.override { yaml = self.yaml_0_11_0_0; }; diff --git a/pkgs/development/haskell-modules/configuration-ghc-8.6.x.nix b/pkgs/development/haskell-modules/configuration-ghc-8.6.x.nix index 61f188aeddbc..4276de9f90d7 100644 --- a/pkgs/development/haskell-modules/configuration-ghc-8.6.x.nix +++ b/pkgs/development/haskell-modules/configuration-ghc-8.6.x.nix @@ -46,7 +46,7 @@ self: super: { # LTS-12.x versions do not compile. base-orphans = self.base-orphans_0_8; - brick = doJailbreak super.brick_0_41_2; # https://github.com/jtdaugherty/brick/pull/188 + brick = self.brick_0_41_2; cassava-megaparsec = doJailbreak super.cassava-megaparsec; config-ini = doJailbreak super.config-ini; # https://github.com/aisamanra/config-ini/issues/18 contravariant = self.contravariant_1_5; @@ -56,12 +56,12 @@ self: super: { hledger = doJailbreak super.hledger; hledger-lib = doJailbreak super.hledger-lib; hledger-ui = doJailbreak super.hledger-ui; - hpack = self.hpack_0_31_0; + hpack = self.hpack_0_31_1; hslua = self.hslua_1_0_1; hslua-module-text = self.hslua-module-text_0_2_0; - hspec = self.hspec_2_5_8; - hspec-core = self.hspec-core_2_5_8; - hspec-discover = self.hspec-discover_2_5_8; + hspec = self.hspec_2_6_0; + hspec-core = self.hspec-core_2_6_0; + hspec-discover = self.hspec-discover_2_6_0; hspec-megaparsec = doJailbreak super.hspec-megaparsec; # newer versions need megaparsec 7.x hspec-meta = self.hspec-meta_2_5_6; JuicyPixels = self.JuicyPixels_3_3_2; @@ -69,11 +69,12 @@ self: super: { megaparsec = dontCheck (doJailbreak super.megaparsec); neat-interpolation = dontCheck super.neat-interpolation; # test suite depends on broken HTF patience = markBrokenVersion "0.1.1" super.patience; + polyparse = self.polyparse_1_12_1; primitive = self.primitive_0_6_4_0; QuickCheck = self.QuickCheck_2_12_6_1; semigroupoids = self.semigroupoids_5_3_1; tagged = self.tagged_0_8_6; - vty = self.vty_5_25; + vty = self.vty_5_25_1; wizards = doJailbreak super.wizards; wl-pprint-extras = doJailbreak super.wl-pprint-extras; yaml = self.yaml_0_11_0_0; @@ -99,31 +100,16 @@ self: super: { # https://github.com/bmillwood/haskell-src-meta/pull/80 haskell-src-meta = doJailbreak super.haskell-src-meta; - # The official 1.12 release is broken and unmaintained. - polyparse = appendPatch (overrideCabal super.polyparse (drv: { editedCabalFile = null; })) (pkgs.fetchpatch { - url = https://github.com/bergmark/polyparse/commit/8a69ee7e57db798c106d8b56dce05b1dfc4fed37.patch; - sha256 = "11r73wx1w6bfrkrnk6r9k7rfzp6qrvkdikb2by37ld06c0w6nn57"; - }); - # https://github.com/skogsbaer/HTF/issues/69 HTF = markBrokenVersion "0.13.2.4" super.HTF; # https://github.com/jgm/skylighting/issues/55 skylighting-core = dontCheck super.skylighting-core; - # https://github.com/joelburget/easytest/issues/12 - easytest = appendPatch super.easytest (pkgs.fetchpatch { - url = https://github.com/joelburget/easytest/pull/13.patch; - sha256 = "0gnsgga8x2yxyg27pya6rhmxfsxf167vsi4xdj98fn8v0j7zz1v1"; - }); - # https://github.com/jgm/pandoc/issues/4974 - pandoc = doJailbreak super.pandoc_2_3_1; + pandoc = doJailbreak super.pandoc_2_4; # Break out of "yaml >=0.10.4.0 && <0.11". stack = doJailbreak super.stack; - # https://github.com/vimus/libmpd-haskell/issues/109 - xmobar = disableCabalFlag (super.xmobar.override { libmpd = null; }) "with_mpd"; - } diff --git a/pkgs/development/haskell-modules/configuration-hackage2nix.yaml b/pkgs/development/haskell-modules/configuration-hackage2nix.yaml index b5f5e1f3675c..97f2955d3a9e 100644 --- a/pkgs/development/haskell-modules/configuration-hackage2nix.yaml +++ b/pkgs/development/haskell-modules/configuration-hackage2nix.yaml @@ -1,6 +1,6 @@ # pkgs/development/haskell-modules/configuration-hackage2nix.yaml -compiler: ghc-8.4.3 +compiler: ghc-8.4.4 core-packages: - array-0.5.2.0 @@ -12,12 +12,12 @@ core-packages: - deepseq-1.4.3.0 - directory-1.3.1.5 - filepath-1.4.2 - - ghc-8.4.3 - - ghc-boot-8.4.3 - - ghc-boot-th-8.4.3 + - ghc-8.4.4 + - ghc-boot-8.4.4 + - ghc-boot-th-8.4.4 - ghc-compact-0.1.0.0 - ghc-prim-0.5.2.0 - - ghci-8.4.3 + - ghci-8.4.4 - haskeline-0.7.4.2 - hpc-0.6.0.3 - integer-gmp-1.0.2.0 @@ -26,10 +26,10 @@ core-packages: - pretty-1.1.3.6 - process-1.6.3.0 - rts-1.0 - - stm-2.4.5.0 + - stm-2.4.5.1 - template-haskell-2.13.0.0 - terminfo-0.4.1.1 - - text-1.2.3.0 + - text-1.2.3.1 - time-1.8.0.2 - transformers-0.5.5.0 - unix-2.7.2.2 @@ -45,7 +45,7 @@ default-package-overrides: - base-compat-batteries ==0.10.1 # Newer versions don't work in LTS-12.x - cassava-megaparsec < 2 - # LTS Haskell 12.14 + # LTS Haskell 12.17 - abstract-deque ==0.3 - abstract-deque-tests ==0.3 - abstract-par ==0.3.3 @@ -73,7 +73,7 @@ default-package-overrides: - aeson-typescript ==0.1.1.0 - aeson-utils ==0.3.0.2 - aeson-yak ==0.1.1.3 - - Agda ==2.5.4.1 + - Agda ==2.5.4.2 - al ==0.1.4.2 - alarmclock ==0.5.0.2 - alerts ==0.1.0.0 @@ -180,7 +180,7 @@ default-package-overrides: - amazonka-xray ==1.6.0 - amqp ==0.18.1 - annotated-wl-pprint ==0.7.0 - - ansi-terminal ==0.8.1 + - ansi-terminal ==0.8.2 - ansi-wl-pprint ==0.6.8.2 - ANum ==0.2.0.2 - api-field-json-th ==0.1.0.2 @@ -436,7 +436,7 @@ default-package-overrides: - concurrency ==1.6.1.0 - concurrent-extra ==0.7.0.12 - concurrent-output ==1.10.7 - - concurrent-split ==0.0.1 + - concurrent-split ==0.0.1.1 - concurrent-supply ==0.1.8 - cond ==0.4.1.1 - conduit ==1.3.1 @@ -552,7 +552,7 @@ default-package-overrides: - data-serializer ==0.3.4 - datasets ==0.2.5 - data-textual ==0.3.0.2 - - data-tree-print ==0.1.0.1 + - data-tree-print ==0.1.0.2 - dataurl ==0.1.0.0 - DAV ==1.3.2 - dawg-ord ==0.5.1.0 @@ -638,7 +638,7 @@ default-package-overrides: - dyre ==0.8.12 - Earley ==0.12.1.0 - easy-file ==0.2.2 - - easytest ==0.2 + - easytest ==0.2.1 - Ebnf2ps ==1.0.15 - echo ==0.1.3 - ed25519 ==0.0.5.0 @@ -731,8 +731,8 @@ default-package-overrides: - fileplow ==0.1.0.0 - filter-logger ==0.6.0.0 - filtrable ==0.1.1.0 - - Fin ==0.2.6.0 - fin ==0.0.1 + - Fin ==0.2.6.0 - FindBin ==0.0.5 - find-clumpiness ==0.2.3.1 - fingertree ==0.1.4.1 @@ -842,9 +842,9 @@ default-package-overrides: - gi-glib ==2.0.17 - gi-gobject ==2.0.16 - gi-gtk ==3.0.25 - - gi-gtk-hs ==0.3.6.2 + - gi-gtk-hs ==0.3.6.3 - gi-gtksource ==3.0.16 - - gi-javascriptcore ==4.0.15 + - gi-javascriptcore ==4.0.16 - gio ==0.13.5.0 - gi-pango ==1.0.16 - giphy-api ==0.6.0.1 @@ -880,6 +880,12 @@ default-package-overrides: - greskell-core ==0.1.2.4 - greskell-websocket ==0.1.1.2 - groom ==0.1.2.1 + - groundhog ==0.9.0 + - groundhog-inspector ==0.9.0 + - groundhog-mysql ==0.9.0 + - groundhog-postgresql ==0.9.0.1 + - groundhog-sqlite ==0.9.0 + - groundhog-th ==0.9.0.1 - groups ==0.4.1.0 - gtk ==0.14.10 - gtk2hs-buildtools ==0.13.4.0 @@ -896,7 +902,7 @@ default-package-overrides: - hamtsolo ==1.0.3 - HandsomeSoup ==0.4.2 - handwriting ==0.1.0.3 - - hapistrano ==0.3.6.1 + - hapistrano ==0.3.7.0 - happstack-server ==7.5.1.1 - happy ==1.19.9 - hasbolt ==0.1.3.0 @@ -1004,8 +1010,8 @@ default-package-overrides: - hsdns ==1.7.1 - hsebaysdk ==0.4.0.0 - hsemail ==2 - - HSet ==0.0.1 - hset ==2.2.0 + - HSet ==0.0.1 - hsexif ==0.6.1.6 - hs-functors ==0.1.3.0 - hs-GeoIP ==0.3 @@ -1050,7 +1056,7 @@ default-package-overrides: - html-entity-map ==0.1.0.0 - htoml ==1.0.0.3 - HTTP ==4000.3.12 - - http2 ==1.6.3 + - http2 ==1.6.4 - http-api-data ==0.3.8.1 - http-client ==0.5.13.1 - http-client-openssl ==0.2.2.0 @@ -1085,7 +1091,7 @@ default-package-overrides: - hw-mquery ==0.1.0.1 - hworker ==0.1.0.1 - hw-parser ==0.0.0.3 - - hw-prim ==0.6.2.17 + - hw-prim ==0.6.2.18 - hw-rankselect ==0.10.0.3 - hw-rankselect-base ==0.3.2.1 - hw-string-parse ==0.0.0.4 @@ -1248,7 +1254,7 @@ default-package-overrides: - libffi ==0.1 - libgit ==0.3.1 - libgraph ==1.14 - - libmpd ==0.9.0.8 + - libmpd ==0.9.0.9 - libxml-sax ==0.7.5 - LibZip ==1.0.1 - lifted-async ==0.10.0.3 @@ -1442,6 +1448,7 @@ default-package-overrides: - network-anonymous-i2p ==0.10.0 - network-anonymous-tor ==0.11.0 - network-attoparsec ==0.12.2 + - network-byte-order ==0.0.0.0 - network-conduit-tls ==1.3.2 - network-house ==0.1.0.2 - network-info ==0.2.0.10 @@ -1523,7 +1530,7 @@ default-package-overrides: - palette ==0.3.0.1 - pandoc ==2.2.1 - pandoc-citeproc ==0.14.8 - - pandoc-types ==1.17.5.2 + - pandoc-types ==1.17.5.4 - pango ==0.13.5.0 - papillon ==0.1.0.6 - parallel ==3.2.2.0 @@ -1746,7 +1753,7 @@ default-package-overrides: - require ==0.2.1 - req-url-extra ==0.1.0.0 - reroute ==0.5.0.0 - - resolv ==0.1.1.1 + - resolv ==0.1.1.2 - resource-pool ==0.2.3.2 - resourcet ==1.2.2 - rest-stringmap ==0.2.0.7 @@ -1781,7 +1788,7 @@ default-package-overrides: - sample-frame ==0.0.3 - sample-frame-np ==0.0.4.1 - sampling ==0.3.3 - - sandi ==0.4.2 + - sandi ==0.4.3 - sandman ==0.2.0.1 - say ==0.1.0.1 - sbp ==2.3.17 @@ -1871,11 +1878,11 @@ default-package-overrides: - siggy-chardust ==1.0.0 - signal ==0.1.0.4 - silently ==1.2.5 - - simple-cmd ==0.1.1 + - simple-cmd ==0.1.2 - simple-reflect ==0.3.3 - simple-sendfile ==0.2.27 - simplest-sqlite ==0.1.0.0 - - simple-vec3 ==0.4.0.8 + - simple-vec3 ==0.4.0.9 - since ==0.0.0 - singleton-bool ==0.1.4 - singleton-nats ==0.4.2 @@ -1952,7 +1959,7 @@ default-package-overrides: - storable-record ==0.0.4 - storable-tuple ==0.0.3.3 - storablevector ==0.2.13 - - store ==0.5.0 + - store ==0.5.0.1 - store-core ==0.4.4 - Strafunski-StrategyLib ==5.0.1.0 - stratosphere ==0.24.4 @@ -2042,7 +2049,7 @@ default-package-overrides: - test-framework-th ==0.2.4 - testing-feat ==1.1.0.0 - testing-type-modifiers ==0.1.0.1 - - texmath ==0.11.1.1 + - texmath ==0.11.1.2 - text ==1.2.3.1 - text-binary ==0.2.1.1 - text-builder ==0.5.4.3 @@ -2133,7 +2140,7 @@ default-package-overrides: - type-level-kv-list ==1.1.0 - type-level-numbers ==0.1.1.1 - typelits-witnesses ==0.3.0.3 - - typenums ==0.1.2 + - typenums ==0.1.2.1 - type-of-html ==1.4.0.1 - type-of-html-static ==0.1.0.2 - type-operators ==0.1.0.4 @@ -2206,7 +2213,7 @@ default-package-overrides: - vec ==0.1 - vector ==0.12.0.1 - vector-algorithms ==0.7.0.4 - - vector-binary-instances ==0.2.5 + - vector-binary-instances ==0.2.5.1 - vector-buffer ==0.4.1 - vector-builder ==0.3.6 - vector-bytes-instances ==0.1.1 @@ -2301,10 +2308,10 @@ default-package-overrides: - X11 ==1.9 - X11-xft ==0.3.1 - x11-xim ==0.0.9.0 - - x509 ==1.7.4 - - x509-store ==1.6.6 + - x509 ==1.7.5 + - x509-store ==1.6.7 - x509-system ==1.6.6 - - x509-validation ==1.6.10 + - x509-validation ==1.6.11 - Xauth ==0.1 - xdg-basedir ==0.2.2 - xeno ==0.3.4 @@ -2580,6 +2587,7 @@ dont-distribute-packages: fltkhs-demos: [ i686-linux, x86_64-linux, x86_64-darwin ] fltkhs-fluid-demos: [ i686-linux, x86_64-linux, x86_64-darwin ] fltkhs-hello-world: [ i686-linux, x86_64-linux, x86_64-darwin ] + fltkhs-themes: [ i686-linux, x86_64-linux, x86_64-darwin ] ghcjs-dom-hello: [ i686-linux, x86_64-linux, x86_64-darwin ] ghcjs-dom-webkit: [ i686-linux, x86_64-linux, x86_64-darwin ] gi-javascriptcore: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -2879,6 +2887,7 @@ dont-distribute-packages: arpa: [ i686-linux, x86_64-linux, x86_64-darwin ] arpack: [ i686-linux, x86_64-linux, x86_64-darwin ] array-forth: [ i686-linux, x86_64-linux, x86_64-darwin ] + arraylist: [ i686-linux, x86_64-linux, x86_64-darwin ] ArrayRef: [ i686-linux, x86_64-linux, x86_64-darwin ] arrow-improve: [ i686-linux, x86_64-linux, x86_64-darwin ] arrowapply-utils: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3025,6 +3034,7 @@ dont-distribute-packages: barrie: [ i686-linux, x86_64-linux, x86_64-darwin ] barrier-monad: [ i686-linux, x86_64-linux, x86_64-darwin ] barrier: [ i686-linux, x86_64-linux, x86_64-darwin ] + base-compat-migrate: [ i686-linux, x86_64-linux, x86_64-darwin ] base-feature-macros: [ i686-linux, x86_64-linux, x86_64-darwin ] base-generics: [ i686-linux, x86_64-linux, x86_64-darwin ] base-io-access: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3048,6 +3058,7 @@ dont-distribute-packages: beam-th: [ i686-linux, x86_64-linux, x86_64-darwin ] beam: [ i686-linux, x86_64-linux, x86_64-darwin ] beamable: [ i686-linux, x86_64-linux, x86_64-darwin ] + bearriver: [ i686-linux, x86_64-linux, x86_64-darwin ] beautifHOL: [ i686-linux, x86_64-linux, x86_64-darwin ] bed-and-breakfast: [ i686-linux, x86_64-linux, x86_64-darwin ] beeminder-api: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3354,6 +3365,7 @@ dont-distribute-packages: campfire: [ i686-linux, x86_64-linux, x86_64-darwin ] canon: [ i686-linux, x86_64-linux, x86_64-darwin ] canonical-filepath: [ i686-linux, x86_64-linux, x86_64-darwin ] + canonical-json: [ i686-linux, x86_64-linux, x86_64-darwin ] canteven-http: [ i686-linux, x86_64-linux, x86_64-darwin ] canteven-listen-http: [ i686-linux, x86_64-linux, x86_64-darwin ] canteven-log: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3607,6 +3619,7 @@ dont-distribute-packages: combinatorial-problems: [ i686-linux, x86_64-linux, x86_64-darwin ] Combinatorrent: [ i686-linux, x86_64-linux, x86_64-darwin ] combobuffer: [ i686-linux, x86_64-linux, x86_64-darwin ] + comfort-array: [ i686-linux, x86_64-linux, x86_64-darwin ] comic: [ i686-linux, x86_64-linux, x86_64-darwin ] Command: [ i686-linux, x86_64-linux, x86_64-darwin ] commander: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3673,6 +3686,7 @@ dont-distribute-packages: conduit-tokenize-attoparsec: [ i686-linux, x86_64-linux, x86_64-darwin ] conduit-zstd: [ i686-linux, x86_64-linux, x86_64-darwin ] conf: [ i686-linux, x86_64-linux, x86_64-darwin ] + confcrypt: [ i686-linux, x86_64-linux, x86_64-darwin ] conffmt: [ i686-linux, x86_64-linux, x86_64-darwin ] confide: [ i686-linux, x86_64-linux, x86_64-darwin ] config-parser: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -3831,6 +3845,7 @@ dont-distribute-packages: ctpl: [ i686-linux, x86_64-linux, x86_64-darwin ] cube: [ i686-linux, x86_64-linux, x86_64-darwin ] cubical: [ i686-linux, x86_64-linux, x86_64-darwin ] + cuboid: [ i686-linux, x86_64-linux, x86_64-darwin ] cudd: [ i686-linux, x86_64-linux, x86_64-darwin ] currency-convert: [ i686-linux, x86_64-linux, x86_64-darwin ] curry-base: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -4240,6 +4255,7 @@ dont-distribute-packages: ehaskell: [ i686-linux, x86_64-linux, x86_64-darwin ] ehs: [ i686-linux, x86_64-linux, x86_64-darwin ] eibd-client-simple: [ i686-linux, x86_64-linux, x86_64-darwin ] + eigen: [ i686-linux, x86_64-linux, x86_64-darwin ] Eight-Ball-Pool-Hack-Cheats: [ i686-linux, x86_64-linux, x86_64-darwin ] either-list-functions: [ i686-linux, x86_64-linux, x86_64-darwin ] EitherT: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -4290,6 +4306,7 @@ dont-distribute-packages: enummapmap: [ i686-linux, x86_64-linux, x86_64-darwin ] enummapset-th: [ i686-linux, x86_64-linux, x86_64-darwin ] env-parser: [ i686-linux, x86_64-linux, x86_64-darwin ] + envstatus: [ i686-linux, x86_64-linux, x86_64-darwin ] epanet-haskell: [ i686-linux, x86_64-linux, x86_64-darwin ] epass: [ i686-linux, x86_64-linux, x86_64-darwin ] epic: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -4361,6 +4378,7 @@ dont-distribute-packages: execs: [ i686-linux, x86_64-linux, x86_64-darwin ] executor: [ i686-linux, x86_64-linux, x86_64-darwin ] exference: [ i686-linux, x86_64-linux, x86_64-darwin ] + exhaustive: [ i686-linux, x86_64-linux, x86_64-darwin ] exherbo-cabal: [ i686-linux, x86_64-linux, x86_64-darwin ] exif: [ i686-linux, x86_64-linux, x86_64-darwin ] exinst-aeson: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -4890,6 +4908,7 @@ dont-distribute-packages: goatee-gtk: [ i686-linux, x86_64-linux, x86_64-darwin ] goatee: [ i686-linux, x86_64-linux, x86_64-darwin ] gochan: [ i686-linux, x86_64-linux, x86_64-darwin ] + godot-haskell: [ i686-linux, x86_64-linux, x86_64-darwin ] gofer-prelude: [ i686-linux, x86_64-linux, x86_64-darwin ] gogol-adexchange-buyer: [ i686-linux, x86_64-linux, x86_64-darwin ] gogol-adexchange-seller: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -5345,6 +5364,7 @@ dont-distribute-packages: haskell-course-preludes: [ i686-linux, x86_64-linux, x86_64-darwin ] haskell-dap: [ i686-linux, x86_64-linux, x86_64-darwin ] haskell-docs: [ i686-linux, x86_64-linux, x86_64-darwin ] + haskell-eigen-util: [ i686-linux, x86_64-linux, x86_64-darwin ] haskell-formatter: [ i686-linux, x86_64-linux, x86_64-darwin ] haskell-ftp: [ i686-linux, x86_64-linux, x86_64-darwin ] haskell-generate: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -5440,6 +5460,14 @@ dont-distribute-packages: haskore: [ i686-linux, x86_64-linux, x86_64-darwin ] HaskRel: [ i686-linux, x86_64-linux, x86_64-darwin ] hasktags: [ i686-linux, x86_64-linux, x86_64-darwin ] + hasktorch-ffi-th: [ i686-linux, x86_64-linux, x86_64-darwin ] + hasktorch-ffi-thc: [ i686-linux, x86_64-linux, x86_64-darwin ] + hasktorch-indef: [ i686-linux, x86_64-linux, x86_64-darwin ] + hasktorch-signatures-partial: [ i686-linux, x86_64-linux, x86_64-darwin ] + hasktorch-signatures-support: [ i686-linux, x86_64-linux, x86_64-darwin ] + hasktorch-signatures: [ i686-linux, x86_64-linux, x86_64-darwin ] + hasktorch-zoo: [ i686-linux, x86_64-linux, x86_64-darwin ] + hasktorch: [ i686-linux, x86_64-linux, x86_64-darwin ] haskus-binary: [ i686-linux, x86_64-linux, x86_64-darwin ] haskus-system-build: [ i686-linux, x86_64-linux, x86_64-darwin ] haskus-utils: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -5473,6 +5501,7 @@ dont-distribute-packages: HaTeX-meta: [ i686-linux, x86_64-linux, x86_64-darwin ] HaTeX-qq: [ i686-linux, x86_64-linux, x86_64-darwin ] hats: [ i686-linux, x86_64-linux, x86_64-darwin ] + hatt: [ i686-linux, x86_64-linux, x86_64-darwin ] haverer: [ i686-linux, x86_64-linux, x86_64-darwin ] HaVSA: [ i686-linux, x86_64-linux, x86_64-darwin ] hawitter: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -5584,6 +5613,7 @@ dont-distribute-packages: Hermes: [ i686-linux, x86_64-linux, x86_64-darwin ] hermit-syb: [ i686-linux, x86_64-linux, x86_64-darwin ] hermit: [ i686-linux, x86_64-linux, x86_64-darwin ] + herms: [ i686-linux, x86_64-linux, x86_64-darwin ] herringbone-embed: [ i686-linux, x86_64-linux, x86_64-darwin ] herringbone-wai: [ i686-linux, x86_64-linux, x86_64-darwin ] herringbone: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -5607,6 +5637,7 @@ dont-distribute-packages: hexquote: [ i686-linux, x86_64-linux, x86_64-darwin ] hext: [ i686-linux, x86_64-linux, x86_64-darwin ] heyefi: [ i686-linux, x86_64-linux, x86_64-darwin ] + heyting-algebras: [ i686-linux, x86_64-linux, x86_64-darwin ] hF2: [ i686-linux, x86_64-linux, x86_64-darwin ] hfann: [ i686-linux, x86_64-linux, x86_64-darwin ] hfd: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -5916,6 +5947,7 @@ dont-distribute-packages: hsbencher-codespeed: [ i686-linux, x86_64-linux, x86_64-darwin ] hsbencher-fusion: [ i686-linux, x86_64-linux, x86_64-darwin ] hsbencher: [ i686-linux, x86_64-linux, x86_64-darwin ] + hsc2hs: [ i686-linux, x86_64-linux, x86_64-darwin ] hsc3-auditor: [ i686-linux, x86_64-linux, x86_64-darwin ] hsc3-cairo: [ i686-linux, x86_64-linux, x86_64-darwin ] hsc3-data: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -6494,6 +6526,8 @@ dont-distribute-packages: KiCS-prophecy: [ i686-linux, x86_64-linux, x86_64-darwin ] KiCS: [ i686-linux, x86_64-linux, x86_64-darwin ] kif-parser: [ i686-linux, x86_64-linux, x86_64-darwin ] + kind-apply: [ i686-linux, x86_64-linux, x86_64-darwin ] + kind-generics: [ i686-linux, x86_64-linux, x86_64-darwin ] kit: [ i686-linux, x86_64-linux, x86_64-darwin ] kmeans-par: [ i686-linux, x86_64-linux, x86_64-darwin ] kmeans-vector: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -6645,6 +6679,7 @@ dont-distribute-packages: lens-time: [ i686-linux, x86_64-linux, x86_64-darwin ] lens-toml-parser: [ i686-linux, x86_64-linux, x86_64-darwin ] lens-tutorial: [ i686-linux, x86_64-linux, x86_64-darwin ] + lens-typelevel: [ i686-linux, x86_64-linux, x86_64-darwin ] lensref: [ i686-linux, x86_64-linux, x86_64-darwin ] level-monad: [ i686-linux, x86_64-linux, x86_64-darwin ] Level0: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -6687,6 +6722,7 @@ dont-distribute-packages: life-sync: [ i686-linux, x86_64-linux, x86_64-darwin ] lifted-base-tf: [ i686-linux, x86_64-linux, x86_64-darwin ] lifted-protolude: [ i686-linux, x86_64-linux, x86_64-darwin ] + lifted-stm: [ i686-linux, x86_64-linux, x86_64-darwin ] lifter: [ i686-linux, x86_64-linux, x86_64-darwin ] ligature: [ i686-linux, x86_64-linux, x86_64-darwin ] lightning-haskell: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -6988,6 +7024,8 @@ dont-distribute-packages: MetaHDBC: [ i686-linux, x86_64-linux, x86_64-darwin ] MetaObject: [ i686-linux, x86_64-linux, x86_64-darwin ] metaplug: [ i686-linux, x86_64-linux, x86_64-darwin ] + metar-http: [ i686-linux, x86_64-linux, x86_64-darwin ] + metar: [ i686-linux, x86_64-linux, x86_64-darwin ] metric: [ i686-linux, x86_64-linux, x86_64-darwin ] Metrics: [ i686-linux, x86_64-linux, x86_64-darwin ] metricsd-client: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -7127,6 +7165,7 @@ dont-distribute-packages: monoid-subclasses: [ i686-linux, x86_64-linux, x86_64-darwin ] monoidplus: [ i686-linux, x86_64-linux, x86_64-darwin ] monoids: [ i686-linux, x86_64-linux, x86_64-darwin ] + monopati: [ i686-linux, x86_64-linux, x86_64-darwin ] monte-carlo: [ i686-linux, x86_64-linux, x86_64-darwin ] monzo: [ i686-linux, x86_64-linux, x86_64-darwin ] moo: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -7146,6 +7185,7 @@ dont-distribute-packages: mp3decoder: [ i686-linux, x86_64-linux, x86_64-darwin ] mp: [ i686-linux, x86_64-linux, x86_64-darwin ] mpdmate: [ i686-linux, x86_64-linux, x86_64-darwin ] + mpi-hs: [ i686-linux, x86_64-linux, x86_64-darwin ] mpppc: [ i686-linux, x86_64-linux, x86_64-darwin ] mpretty: [ i686-linux, x86_64-linux, x86_64-darwin ] mpris: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -7665,6 +7705,7 @@ dont-distribute-packages: persistent-qq: [ i686-linux, x86_64-linux, x86_64-darwin ] persistent-ratelimit: [ i686-linux, x86_64-linux, x86_64-darwin ] persistent-relational-record: [ i686-linux, x86_64-linux, x86_64-darwin ] + persistent-template-classy: [ i686-linux, x86_64-linux, x86_64-darwin ] persistent-vector: [ i686-linux, x86_64-linux, x86_64-darwin ] persistent-zookeeper: [ i686-linux, x86_64-linux, x86_64-darwin ] persona-idp: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -7748,6 +7789,7 @@ dont-distribute-packages: plan-b: [ i686-linux, x86_64-linux, x86_64-darwin ] planar-graph: [ i686-linux, x86_64-linux, x86_64-darwin ] planb-token-introspection: [ i686-linux, x86_64-linux, x86_64-darwin ] + planet-mitchell-test: [ i686-linux, x86_64-linux, x86_64-darwin ] planet-mitchell: [ i686-linux, x86_64-linux, x86_64-darwin ] plankton: [ i686-linux, x86_64-linux, x86_64-darwin ] plat: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8334,6 +8376,7 @@ dont-distribute-packages: rosmsg-bin: [ i686-linux, x86_64-linux, x86_64-darwin ] rosmsg: [ i686-linux, x86_64-linux, x86_64-darwin ] rosso: [ i686-linux, x86_64-linux, x86_64-darwin ] + rounded: [ i686-linux, x86_64-linux, x86_64-darwin ] rounding: [ i686-linux, x86_64-linux, x86_64-darwin ] roundtrip-aeson: [ i686-linux, x86_64-linux, x86_64-darwin ] roundtrip-string: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8536,6 +8579,7 @@ dont-distribute-packages: servant-github: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-haxl-client: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-hmac-auth: [ i686-linux, x86_64-linux, x86_64-darwin ] + servant-http2-client: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-iCalendar: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-jquery: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-js: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8555,6 +8599,8 @@ dont-distribute-packages: servant-snap: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-streaming-client: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-subscriber: [ i686-linux, x86_64-linux, x86_64-darwin ] + servant-swagger-ui-jensoleg: [ i686-linux, x86_64-linux, x86_64-darwin ] + servant-swagger-ui-redoc: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-xml: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-zeppelin-client: [ i686-linux, x86_64-linux, x86_64-darwin ] servant-zeppelin-server: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8603,6 +8649,7 @@ dont-distribute-packages: shaker: [ i686-linux, x86_64-linux, x86_64-darwin ] shakespeare-babel: [ i686-linux, x86_64-linux, x86_64-darwin ] shakespeare-sass: [ i686-linux, x86_64-linux, x86_64-darwin ] + shannon-fano: [ i686-linux, x86_64-linux, x86_64-darwin ] shapely-data: [ i686-linux, x86_64-linux, x86_64-darwin ] shapes-demo: [ i686-linux, x86_64-linux, x86_64-darwin ] shared-buffer: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8621,6 +8668,7 @@ dont-distribute-packages: shellish: [ i686-linux, x86_64-linux, x86_64-darwin ] shellmate-extras: [ i686-linux, x86_64-linux, x86_64-darwin ] shellmate: [ i686-linux, x86_64-linux, x86_64-darwin ] + shh: [ i686-linux, x86_64-linux, x86_64-darwin ] shikensu: [ i686-linux, x86_64-linux, x86_64-darwin ] shivers-cfg: [ i686-linux, x86_64-linux, x86_64-darwin ] shoap: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8641,6 +8689,7 @@ dont-distribute-packages: simd: [ i686-linux, x86_64-linux, x86_64-darwin ] simgi: [ i686-linux, x86_64-linux, x86_64-darwin ] simple-actors: [ i686-linux, x86_64-linux, x86_64-darwin ] + simple-affine-space: [ i686-linux, x86_64-linux, x86_64-darwin ] simple-atom: [ i686-linux, x86_64-linux, x86_64-darwin ] simple-bluetooth: [ i686-linux, x86_64-linux, x86_64-darwin ] simple-c-value: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8877,6 +8926,7 @@ dont-distribute-packages: spoonutil: [ i686-linux, x86_64-linux, x86_64-darwin ] spoty: [ i686-linux, x86_64-linux, x86_64-darwin ] Sprig: [ i686-linux, x86_64-linux, x86_64-darwin ] + sprinkles: [ i686-linux, x86_64-linux, x86_64-darwin ] spritz: [ i686-linux, x86_64-linux, x86_64-darwin ] spsa: [ i686-linux, x86_64-linux, x86_64-darwin ] spy: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8901,6 +8951,7 @@ dont-distribute-packages: sssp: [ i686-linux, x86_64-linux, x86_64-darwin ] sstable: [ i686-linux, x86_64-linux, x86_64-darwin ] SSTG: [ i686-linux, x86_64-linux, x86_64-darwin ] + st2: [ i686-linux, x86_64-linux, x86_64-darwin ] stable-heap: [ i686-linux, x86_64-linux, x86_64-darwin ] stable-maps: [ i686-linux, x86_64-linux, x86_64-darwin ] stable-marriage: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -8946,6 +8997,7 @@ dont-distribute-packages: stats: [ i686-linux, x86_64-linux, x86_64-darwin ] statsd-client: [ i686-linux, x86_64-linux, x86_64-darwin ] statsd: [ i686-linux, x86_64-linux, x86_64-darwin ] + statsdi: [ i686-linux, x86_64-linux, x86_64-darwin ] stb-image-redux: [ i686-linux, x86_64-linux, x86_64-darwin ] stb-truetype: [ i686-linux, x86_64-linux, x86_64-darwin ] stdata: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -9690,6 +9742,7 @@ dont-distribute-packages: visualize-cbn: [ i686-linux, x86_64-linux, x86_64-darwin ] vk-aws-route53: [ i686-linux, x86_64-linux, x86_64-darwin ] VKHS: [ i686-linux, x86_64-linux, x86_64-darwin ] + voicebase: [ i686-linux, x86_64-linux, x86_64-darwin ] vorbiscomment: [ i686-linux, x86_64-linux, x86_64-darwin ] vowpal-utils: [ i686-linux, x86_64-linux, x86_64-darwin ] voyeur: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -9701,6 +9754,7 @@ dont-distribute-packages: vty-menu: [ i686-linux, x86_64-linux, x86_64-darwin ] vty-ui-extras: [ i686-linux, x86_64-linux, x86_64-darwin ] vty-ui: [ i686-linux, x86_64-linux, x86_64-darwin ] + waargonaut: [ i686-linux, x86_64-linux, x86_64-darwin ] wacom-daemon: [ i686-linux, x86_64-linux, x86_64-darwin ] waddle: [ i686-linux, x86_64-linux, x86_64-darwin ] wahsp: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -9818,6 +9872,7 @@ dont-distribute-packages: winio: [ i686-linux, x86_64-linux, x86_64-darwin ] wire-streams: [ i686-linux, x86_64-linux, x86_64-darwin ] wiring: [ i686-linux, x86_64-linux, x86_64-darwin ] + witty: [ i686-linux, x86_64-linux, x86_64-darwin ] wkt-geom: [ i686-linux, x86_64-linux, x86_64-darwin ] wkt: [ i686-linux, x86_64-linux, x86_64-darwin ] wl-pprint-ansiterm: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -9877,6 +9932,7 @@ dont-distribute-packages: X11-rm: [ i686-linux, x86_64-linux, x86_64-darwin ] X11-xdamage: [ i686-linux, x86_64-linux, x86_64-darwin ] X11-xfixes: [ i686-linux, x86_64-linux, x86_64-darwin ] + x509-util: [ i686-linux, x86_64-linux, x86_64-darwin ] x86-64bit: [ i686-linux, x86_64-linux, x86_64-darwin ] xcb-types: [ i686-linux, x86_64-linux, x86_64-darwin ] xcffib: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -9968,10 +10024,15 @@ dont-distribute-packages: yaml-rpc: [ i686-linux, x86_64-linux, x86_64-darwin ] yaml2owl: [ i686-linux, x86_64-linux, x86_64-darwin ] yamlkeysdiff: [ i686-linux, x86_64-linux, x86_64-darwin ] + yampa-canvas: [ i686-linux, x86_64-linux, x86_64-darwin ] yampa-glfw: [ i686-linux, x86_64-linux, x86_64-darwin ] + yampa-gloss: [ i686-linux, x86_64-linux, x86_64-darwin ] yampa-glut: [ i686-linux, x86_64-linux, x86_64-darwin ] yampa-sdl2: [ i686-linux, x86_64-linux, x86_64-darwin ] + yampa-test: [ i686-linux, x86_64-linux, x86_64-darwin ] yampa2048: [ i686-linux, x86_64-linux, x86_64-darwin ] + Yampa: [ i686-linux, x86_64-linux, x86_64-darwin ] + YampaSynth: [ i686-linux, x86_64-linux, x86_64-darwin ] yandex-translate: [ i686-linux, x86_64-linux, x86_64-darwin ] yaop: [ i686-linux, x86_64-linux, x86_64-darwin ] yap: [ i686-linux, x86_64-linux, x86_64-darwin ] @@ -10072,6 +10133,7 @@ dont-distribute-packages: yjftp: [ i686-linux, x86_64-linux, x86_64-darwin ] yjsvg: [ i686-linux, x86_64-linux, x86_64-darwin ] yoctoparsec: [ i686-linux, x86_64-linux, x86_64-darwin ] + yoda: [ i686-linux, x86_64-linux, x86_64-darwin ] yoga: [ i686-linux, x86_64-linux, x86_64-darwin ] Yogurt-Standalone: [ i686-linux, x86_64-linux, x86_64-darwin ] Yogurt: [ i686-linux, x86_64-linux, x86_64-darwin ] diff --git a/pkgs/development/haskell-modules/configuration-halvm-2.4.0.nix b/pkgs/development/haskell-modules/configuration-halvm-2.4.0.nix deleted file mode 100644 index be90794f58d9..000000000000 --- a/pkgs/development/haskell-modules/configuration-halvm-2.4.0.nix +++ /dev/null @@ -1,59 +0,0 @@ -{ pkgs, haskellLib }: - -with haskellLib; - -self: super: { - - # Suitable LLVM version. - llvmPackages = pkgs.llvmPackages_35; - - # Disable GHC 8.0.x core libraries. - array = null; - base = null; - binary = null; - bytestring = null; - Cabal = null; - containers = null; - deepseq = null; - directory = null; - filepath = null; - ghc-boot = null; - ghc-boot-th = null; - ghc-prim = null; - ghci = null; - haskeline = null; - hoopl = null; - hpc = null; - integer-gmp = null; - pretty = null; - process = null; - rts = null; - template-haskell = null; - terminfo = null; - time = null; - transformers = null; - unix = null; - xhtml = null; - - # cabal-install can use the native Cabal library. - cabal-install = super.cabal-install.override { Cabal = null; }; - - # jailbreak-cabal can use the native Cabal library. - jailbreak-cabal = super.jailbreak-cabal.override { Cabal = null; }; - - # https://github.com/bmillwood/applicative-quoters/issues/6 - applicative-quoters = appendPatch super.applicative-quoters (pkgs.fetchpatch { - url = "https://patch-diff.githubusercontent.com/raw/bmillwood/applicative-quoters/pull/7.patch"; - sha256 = "026vv2k3ks73jngwifszv8l59clg88pcdr4mz0wr0gamivkfa1zy"; - }); - - # https://github.com/christian-marie/xxhash/issues/3 - xxhash = doJailbreak super.xxhash; - - # https://github.com/Deewiant/glob/issues/8 - Glob = doJailbreak super.Glob; - - # http://hub.darcs.net/dolio/vector-algorithms/issue/9#comment-20170112T145715 - vector-algorithms = dontCheck super.vector-algorithms; - -} diff --git a/pkgs/development/haskell-modules/generic-builder.nix b/pkgs/development/haskell-modules/generic-builder.nix index 8f230c92aaa1..a0bf655a67b7 100644 --- a/pkgs/development/haskell-modules/generic-builder.nix +++ b/pkgs/development/haskell-modules/generic-builder.nix @@ -443,6 +443,7 @@ stdenv.mkDerivation ({ env = shellFor { packages = p: [ drv ]; + inherit shellHook; }; }; diff --git a/pkgs/development/haskell-modules/hackage-packages.nix b/pkgs/development/haskell-modules/hackage-packages.nix index fe488d0447e1..a6966e9558b3 100644 --- a/pkgs/development/haskell-modules/hackage-packages.nix +++ b/pkgs/development/haskell-modules/hackage-packages.nix @@ -725,7 +725,7 @@ self: { "Agda" = callPackage ({ mkDerivation, alex, array, async, base, binary, blaze-html - , boxes, bytestring, Cabal, containers, cpphs, data-hash, deepseq + , boxes, bytestring, Cabal, containers, data-hash, deepseq , directory, EdisonCore, edit-distance, emacs, equivalence , filemanip, filepath, geniplate-mirror, gitrev, happy, hashable , hashtables, haskeline, ieee754, mtl, murmur-hash, pretty, process @@ -734,8 +734,8 @@ self: { }: mkDerivation { pname = "Agda"; - version = "2.5.4.1"; - sha256 = "0bxpibsk98n9xp42d92ma5vj2fam8rsnl61fbhr3askfjdvalnbp"; + version = "2.5.4.2"; + sha256 = "07wvawpfjhx3gw2w53v27ncv1bl0kkx08wkm6wzxldbslkcasign"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -748,7 +748,7 @@ self: { template-haskell text time transformers unordered-containers uri-encode zlib ]; - libraryToolDepends = [ alex cpphs happy ]; + libraryToolDepends = [ alex happy ]; executableHaskellDepends = [ base directory filepath process ]; executableToolDepends = [ emacs ]; postInstall = '' @@ -1185,8 +1185,8 @@ self: { }: mkDerivation { pname = "BNFC"; - version = "2.8.1"; - sha256 = "082r1arj76563q1grc9ivpzfip8ghdffm87fj4q830s40dffl6rc"; + version = "2.8.2"; + sha256 = "1n4zgm6gls6lpasn8y5hy0m75qkkbk6mj18g2yhjrw8514a5860h"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ array base ]; @@ -8951,10 +8951,8 @@ self: { }: mkDerivation { pname = "HaXml"; - version = "1.25.4"; - sha256 = "1d8xq37h627im5harybhsn08qjdaf6vskldm03cqbfjmr2w6fx6p"; - revision = "1"; - editedCabalFile = "1vnil3xdyhr48f0nxcaljbl1k5ibg5g5gghvrhykg447b0jvp922"; + version = "1.25.5"; + sha256 = "0d8jbiv53r3ndg76r3937idqdg34nhmb99vj087i73hjnv21mifb"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -10226,8 +10224,8 @@ self: { ({ mkDerivation, base, mtl, QuickCheck, Stream }: mkDerivation { pname = "IOSpec"; - version = "0.3"; - sha256 = "0dwl2nx8fisl1syggwd3060wa50lj5nl9312x4q7pq153cxjppyy"; + version = "0.3.1"; + sha256 = "1xfhsj8r2gf9wynsihls255qqwqj8vrjyn56rk60xvm27ya4f1d3"; libraryHaskellDepends = [ base mtl QuickCheck Stream ]; description = "A pure specification of the IO monad"; license = stdenv.lib.licenses.bsd3; @@ -12274,10 +12272,8 @@ self: { }: mkDerivation { pname = "MiniAgda"; - version = "0.2017.2.18"; - sha256 = "0s3xp18y4kcjd1qq87vbhijbbpi9d1p08dgxw7521xlr3gmxkqxw"; - revision = "1"; - editedCabalFile = "0n4sd1b0c9fmgn7xqbhbms6y3ffkdgpa4fw7xcx31vgql2adxb0n"; + version = "0.2018.11.4"; + sha256 = "179f7kf355bkmpz1xjlf072axwsixjafh77m0anqx6q3g7qd0b36"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -12290,6 +12286,32 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "MissingH_1_4_0_1" = callPackage + ({ mkDerivation, array, base, containers, directory + , errorcall-eq-instance, filepath, hslogger, HUnit, mtl, network + , old-locale, old-time, parsec, process, QuickCheck, random + , regex-compat, testpack, time, unix + }: + mkDerivation { + pname = "MissingH"; + version = "1.4.0.1"; + sha256 = "0wcvgrmav480w7nf4bl14yi0jq2yzanysxwzwas9hpb28vyjlgr8"; + revision = "1"; + editedCabalFile = "04syc14nz11fay6fm6nlixyflrfhpg4jiyxx6mnxrl6asd3cl989"; + libraryHaskellDepends = [ + array base containers directory filepath hslogger HUnit mtl network + old-locale old-time parsec process random regex-compat time unix + ]; + testHaskellDepends = [ + array base containers directory errorcall-eq-instance filepath + hslogger HUnit mtl network old-locale old-time parsec process + QuickCheck random regex-compat testpack time unix + ]; + description = "Large utility library"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "MissingH" = callPackage ({ mkDerivation, array, base, containers, directory , errorcall-eq-instance, filepath, hslogger, HUnit, mtl, network @@ -15071,12 +15093,12 @@ self: { }) {}; "QuickCheck-safe" = callPackage - ({ mkDerivation, base, QuickCheck }: + ({ mkDerivation, base, containers, QuickCheck }: mkDerivation { pname = "QuickCheck-safe"; - version = "0.1.0.4"; - sha256 = "0ixizi0cshqqczm86rnibas8zygf8i29l3i0jivvb81zi89rscl7"; - libraryHaskellDepends = [ base QuickCheck ]; + version = "0.1.0.5"; + sha256 = "0l8wp2np4mlbybzwcz8g4r9d8c65yljnvizs3g1rvig4b65j283l"; + libraryHaskellDepends = [ base containers QuickCheck ]; description = "Safe reimplementation of QuickCheck's core"; license = stdenv.lib.licenses.mit; }) {}; @@ -17234,6 +17256,8 @@ self: { pname = "Stack"; version = "0.3.2"; sha256 = "1rap4xyldzwj26r8mbvzkyy9021q8h06pz8cyd061vyslrl7p89b"; + revision = "1"; + editedCabalFile = "1ngyrylqmc2fc088d49pn41nlps3mqjimh0y8wc6nmpkay5pj0m8"; libraryHaskellDepends = [ base nats stm ]; description = "Stack data structure"; license = stdenv.lib.licenses.bsd3; @@ -18650,8 +18674,8 @@ self: { }: mkDerivation { pname = "Villefort"; - version = "0.1.2.16"; - sha256 = "00ngq1i7f1sqksfl9cg1qzhp4fxv9h6mmjfljj3cahcw50h4al64"; + version = "0.1.2.17"; + sha256 = "17ga54kclbcr6vpiy6q5yws9535j9sg6isqggx05kz3hsa7nllbz"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -19605,17 +19629,20 @@ self: { }) {}; "Yampa" = callPackage - ({ mkDerivation, base, deepseq, random }: + ({ mkDerivation, base, deepseq, random, simple-affine-space }: mkDerivation { pname = "Yampa"; - version = "0.12"; - sha256 = "077fnazzcv7gckpklmdgk4hz6nnfnims11c1r4dwpnb0z6n31wcg"; + version = "0.13"; + sha256 = "1rxy8vky3wmqn4awr6v7r40ghk6nr27y11jnzbkj1bdp1948irc0"; isLibrary = true; isExecutable = true; - libraryHaskellDepends = [ base deepseq random ]; + libraryHaskellDepends = [ + base deepseq random simple-affine-space + ]; testHaskellDepends = [ base ]; - description = "Library for programming hybrid systems"; + description = "Elegant Functional Reactive Programming Language for Hybrid Systems"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "Yampa-core" = callPackage @@ -19647,6 +19674,7 @@ self: { ]; description = "Software synthesizer"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "Yocto" = callPackage @@ -22167,8 +22195,8 @@ self: { }: mkDerivation { pname = "aeson-schema"; - version = "0.4.1.2"; - sha256 = "1afw0kf39myh4yqkkz8z1a7ji02j2iy7j66ch06pglvp5hzyi9dk"; + version = "0.4.1.3"; + sha256 = "17w0hih9l7x9r14s2mxywjzysm00f6bz6rqsgknvv9injakpscn3"; enableSeparateDataOutput = true; libraryHaskellDepends = [ aeson attoparsec base bytestring containers fail ghc-prim mtl @@ -26876,8 +26904,8 @@ self: { pname = "ansi-pretty"; version = "0.1.2.1"; sha256 = "1ill2dlzbxn97smkzdqcjfx9z3fw7pgwvz6w36d92n8p7zwik23h"; - revision = "5"; - editedCabalFile = "18vg7p8ymwk3kfhvg8cn8vq574x52n8a2c7ihrg4jg1gdsdrn0vi"; + revision = "6"; + editedCabalFile = "1j2iyzf61wmwdrb8i3xynins7shjv89y4028sy13rfywsbqpjg4s"; libraryHaskellDepends = [ aeson ansi-wl-pprint array base bytestring containers generics-sop nats scientific semigroups tagged text time unordered-containers @@ -26891,8 +26919,8 @@ self: { ({ mkDerivation, base, colour }: mkDerivation { pname = "ansi-terminal"; - version = "0.8.1"; - sha256 = "1fm489l5mnlyb6bidq7vxz5asvhshmxz38f0lijgj0z7yyzqpwwy"; + version = "0.8.2"; + sha256 = "147ss9wz03ww6ypbv6yh5vi1wfrfcaqm8r6nxh50vnp7254359wh"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base colour ]; @@ -27055,8 +27083,8 @@ self: { }: mkDerivation { pname = "antiope-athena"; - version = "6.1.1"; - sha256 = "1scshv7whw3ylp9nq8zgz12rbkvwq6hmcwn04s8h7ygnb9k3zy21"; + version = "6.1.2"; + sha256 = "0af1sd3hhi2j2bsglqi5vqs7cjh719zbzkjcxi68sy4h3783vqc2"; libraryHaskellDepends = [ amazonka amazonka-athena amazonka-core base lens resourcet text unliftio-core @@ -27072,8 +27100,8 @@ self: { ({ mkDerivation, aeson, antiope-s3, avro, base, bytestring, text }: mkDerivation { pname = "antiope-contract"; - version = "6.1.1"; - sha256 = "14nvb786w4cqam3nd3wjfr7m0ysbr07vjm0ivwsxyvda3mwkn7pz"; + version = "6.1.2"; + sha256 = "1s9xikffc3l6q7l2fmi5yz6shw90w8zgb8sc1s3d85z7kfsi87rp"; libraryHaskellDepends = [ aeson antiope-s3 avro base bytestring text ]; @@ -27088,8 +27116,8 @@ self: { }: mkDerivation { pname = "antiope-core"; - version = "6.1.1"; - sha256 = "0vmqyhxwfs45x3cqrlm1nij0cfnw2bk6sq3ldq6vrfpzm892g6py"; + version = "6.1.2"; + sha256 = "0bn975bcr1fm8w63m641iip22hw5alam28z73p3cjcx9wkzkfca4"; libraryHaskellDepends = [ amazonka amazonka-core base bytestring generic-lens http-client lens monad-logger mtl resourcet transformers unliftio-core @@ -27109,8 +27137,8 @@ self: { }: mkDerivation { pname = "antiope-dynamodb"; - version = "6.1.1"; - sha256 = "1kjsqka70bnkjzgdi427jqihlnm997ii147nzj8w04w5d6ynm2ly"; + version = "6.1.2"; + sha256 = "04ik6ms66yiq934dqhadw4fhb5js08q6czpgb8vqsv8pvm3cj30f"; libraryHaskellDepends = [ amazonka amazonka-core amazonka-dynamodb antiope-core base generic-lens lens text unliftio-core unordered-containers @@ -27130,8 +27158,8 @@ self: { }: mkDerivation { pname = "antiope-messages"; - version = "6.1.1"; - sha256 = "0nklh0wi1y6drpm7i4ssjc8xx4b20knpnghn2yv839ph6w0f0r13"; + version = "6.1.2"; + sha256 = "1vkjflqi2k4d74hwagfaff4gyjx5809d2yjijhmgwk5aldyydw9m"; libraryHaskellDepends = [ aeson amazonka amazonka-core amazonka-s3 amazonka-sqs antiope-s3 base generic-lens lens lens-aeson monad-loops network-uri text @@ -27155,8 +27183,8 @@ self: { }: mkDerivation { pname = "antiope-s3"; - version = "6.1.1"; - sha256 = "0aq0qk377wvxm3kgy63zk382rnvjxx8csxj63vnmc5gikz5i2ya7"; + version = "6.1.2"; + sha256 = "1lrawihlnl1kmhqimcf59d7a2ad916ss83zjllx3x8cy6br68b4r"; libraryHaskellDepends = [ amazonka amazonka-core amazonka-s3 antiope-core base bytestring conduit conduit-extra exceptions generic-lens http-types lens @@ -27178,8 +27206,8 @@ self: { }: mkDerivation { pname = "antiope-sns"; - version = "6.1.1"; - sha256 = "0jdlm3sl7w5cq2hpikm73763np56g16z48b34wavg9yblrdfvvn7"; + version = "6.1.2"; + sha256 = "0b6blhcc1dplc16v9k12jn9s9ii5575sj9hm4kbla8483j24rd3k"; libraryHaskellDepends = [ aeson amazonka amazonka-core amazonka-sns base generic-lens lens text unliftio-core @@ -27199,8 +27227,8 @@ self: { }: mkDerivation { pname = "antiope-sqs"; - version = "6.1.1"; - sha256 = "189wgl3qpmf4amgc571zv88zpdblaqcbcnw93a6lk6i7rzc6h40r"; + version = "6.1.2"; + sha256 = "1d508kcsm1bxz768fxin5jc6y7jqskdxxpgl1z5n1579aq7wb0ia"; libraryHaskellDepends = [ aeson amazonka amazonka-core amazonka-s3 amazonka-sqs antiope-messages antiope-s3 base generic-lens lens lens-aeson @@ -27331,7 +27359,7 @@ self: { description = "Bindings to libaosd, a library for Cairo-based on-screen displays"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; - }) {libaosd = null;}; + }) {inherit (pkgs) libaosd;}; "ap-reflect" = callPackage ({ mkDerivation, base }: @@ -28961,6 +28989,24 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "arraylist" = callPackage + ({ mkDerivation, base, hashable, initialize, MonadRandom, primitive + , smallcheck, tasty, tasty-smallcheck + }: + mkDerivation { + pname = "arraylist"; + version = "0.1.0.0"; + sha256 = "1swvn9k7j2pwcln4znzrszgwgdi4f26q9qlaz2fi8jixc089v91g"; + libraryHaskellDepends = [ base initialize primitive ]; + testHaskellDepends = [ + base hashable MonadRandom primitive smallcheck tasty + tasty-smallcheck + ]; + description = "Memory-efficient ArrayList implementation"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "arrow-extras" = callPackage ({ mkDerivation, base }: mkDerivation { @@ -29123,10 +29169,8 @@ self: { }: mkDerivation { pname = "ascii"; - version = "0.0.5.1"; - sha256 = "06z63pr5g1wcsyii3pr8svz23cl9n4srspbkvby595pxfcbzkirn"; - revision = "1"; - editedCabalFile = "1v8pgvhl47c4sf226pg175wydw5a60lssz0876haqkqm5h7bjm7g"; + version = "0.0.5.2"; + sha256 = "1kbf6iml4nvkzf78xqvxy67469vznd05ig8aprq7zx5vr9njliby"; libraryHaskellDepends = [ base blaze-builder bytestring case-insensitive hashable semigroups text @@ -29571,8 +29615,8 @@ self: { ({ mkDerivation, base, Cabal, directory, filepath }: mkDerivation { pname = "asset-bundle"; - version = "0.1.0.0"; - sha256 = "0fdl3dgnc5q9mv8w5g3qrhyprqhbyp4jrr5gimf9xzd67fwsnf86"; + version = "0.1.0.1"; + sha256 = "0wf0xnf4ljihzvbz8pkaiqwhvp00bwnyx0334s4757z6lsc2hsrw"; libraryHaskellDepends = [ base Cabal directory filepath ]; description = "A build-time Cabal library that bundles executables with assets"; license = stdenv.lib.licenses.bsd3; @@ -30270,6 +30314,25 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "atomic-write_0_2_0_6" = callPackage + ({ mkDerivation, base, bytestring, directory, filepath, hspec + , temporary, text, unix-compat + }: + mkDerivation { + pname = "atomic-write"; + version = "0.2.0.6"; + sha256 = "1xs3shwnlj8hmnm3q6jc8nv78z0481i5n4hrqqdmbpx8grvlnqyl"; + libraryHaskellDepends = [ + base bytestring directory filepath temporary text unix-compat + ]; + testHaskellDepends = [ + base bytestring filepath hspec temporary text unix-compat + ]; + description = "Atomically write to a file"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "atomo" = callPackage ({ mkDerivation, array, base, bytestring, containers, directory , filepath, hashable, haskeline, hint, mtl, parsec, pretty @@ -30348,16 +30411,16 @@ self: { "ats-pkg" = callPackage ({ mkDerivation, ansi-wl-pprint, base, binary, bytestring, bzlib - , Cabal, cli-setup, composition-prelude, containers, cpphs - , dependency, dhall, directory, file-embed, filemanip, filepath - , http-client, http-client-tls, lzma, microlens, mtl - , optparse-applicative, parallel-io, process, shake, shake-ats - , shake-c, shake-ext, tar, temporary, text, unix, zip-archive, zlib + , Cabal, cli-setup, composition-prelude, containers, dependency + , dhall, directory, file-embed, filemanip, filepath, http-client + , http-client-tls, lzma, microlens, mtl, optparse-applicative + , parallel-io, process, shake, shake-ats, shake-c, shake-ext, tar + , temporary, text, unix, zip-archive, zlib }: mkDerivation { pname = "ats-pkg"; - version = "3.2.2.3"; - sha256 = "111lwv4461ij5z8z9n0kyvqcrjk0x5yjajfc3wyc3lklgc6ccjva"; + version = "3.2.4.0"; + sha256 = "0pj7zyf38rbi48lh8jhcm54wrflkdyh1583d9h4iy9nj5apa85ip"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -30368,7 +30431,6 @@ self: { microlens mtl parallel-io process shake shake-ats shake-c shake-ext tar text unix zip-archive zlib ]; - libraryToolDepends = [ cpphs ]; executableHaskellDepends = [ base bytestring cli-setup dependency directory microlens optparse-applicative parallel-io shake shake-ats temporary text @@ -31381,20 +31443,18 @@ self: { "avers-server" = callPackage ({ mkDerivation, aeson, avers, avers-api, base, base64-bytestring , bytestring, bytestring-conversion, containers, cookie, cryptonite - , http-types, memory, mtl, resource-pool, rethinkdb-client-driver - , servant, servant-server, stm, text, time, transformers, wai - , wai-websockets, websockets + , http-types, memory, mtl, resource-pool, servant, servant-server + , stm, text, time, transformers, wai, wai-websockets, websockets }: mkDerivation { pname = "avers-server"; - version = "0.1.0"; - sha256 = "0m809p50l1bfhnmbwl3ncav8lz7xh38yakqa35z65afb6k1g900z"; + version = "0.1.0.1"; + sha256 = "13jic248m2307r84acv4b4xlh7pvx4kxm6gp0nhvz1ds0bbrdkdy"; libraryHaskellDepends = [ aeson avers avers-api base base64-bytestring bytestring bytestring-conversion containers cookie cryptonite http-types - memory mtl resource-pool rethinkdb-client-driver servant - servant-server stm text time transformers wai wai-websockets - websockets + memory mtl resource-pool servant servant-server stm text time + transformers wai wai-websockets websockets ]; description = "Server implementation of the Avers API"; license = stdenv.lib.licenses.mit; @@ -31483,7 +31543,7 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "avro_0_3_6_1" = callPackage + "avro_0_4_0_0" = callPackage ({ mkDerivation, aeson, array, base, base16-bytestring, binary , bytestring, containers, data-binary-ieee754, directory, entropy , extra, fail, hashable, hspec, lens, lens-aeson, mtl, pure-zlib @@ -31492,8 +31552,8 @@ self: { }: mkDerivation { pname = "avro"; - version = "0.3.6.1"; - sha256 = "0b1pj47nfpbqvcp5vzraa1przq1c9ll8n76qbyg05fjfvamycbq3"; + version = "0.4.0.0"; + sha256 = "1cly3x4lmibcjm5sz68s2fncakpx2cfvyimv4ck1mm5v94yfp8pi"; libraryHaskellDepends = [ aeson array base base16-bytestring binary bytestring containers data-binary-ieee754 entropy fail hashable mtl pure-zlib scientific @@ -32227,25 +32287,22 @@ self: { }: mkDerivation { pname = "axel"; - version = "0.0.6"; - sha256 = "17601gv4rjdxmg2qqp2y9b5lk9ia0z1izhympmwf6zs7wkjs6fyh"; - revision = "2"; - editedCabalFile = "12m24klalqxpglh9slhr65sxqd4dsqcaz2abmw29cki0cz6x29dp"; + version = "0.0.8"; + sha256 = "16fkrc87yirzha3fgdcbidi7k9xkmb5y5w1i4i10rlikhszfr2b9"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; libraryHaskellDepends = [ base bytestring directory filepath freer-simple haskell-src-exts lens lens-aeson optparse-applicative parsec process regex-pcre - singletons strict text typed-process vector yaml + singletons strict template-haskell text typed-process vector yaml ]; executableHaskellDepends = [ base freer-simple optparse-applicative ]; testHaskellDepends = [ base bytestring filepath freer-simple hedgehog lens split tasty - tasty-discover tasty-golden tasty-hedgehog tasty-hspec - template-haskell transformers + tasty-discover tasty-golden tasty-hedgehog tasty-hspec transformers ]; testToolDepends = [ tasty-discover ]; description = "The Axel programming language"; @@ -32398,17 +32455,16 @@ self: { ({ mkDerivation, base, binary, bytestring, containers, criterion , directory, errors, exceptions, filepath, lens, mmap, mtl, pipes , pipes-interleave, QuickCheck, tasty, tasty-quickcheck - , transformers, vector + , transformers, vector, vector-binary-instances }: mkDerivation { pname = "b-tree"; - version = "0.1.3"; - sha256 = "0r1bgcjsykd9qzzr6chxw8bfnmvk32p9663j6h11wmq6nq7nrlkb"; - revision = "2"; - editedCabalFile = "04is4fc308f1achbdxvqq9rg4v8c02f1w88wysp318dbhhmwgggh"; + version = "0.1.4"; + sha256 = "17hcv85020dm5h3449bfa763bcbl723h17chah4418dby2ql5lxg"; libraryHaskellDepends = [ base binary bytestring containers directory errors exceptions filepath lens mmap mtl pipes pipes-interleave transformers vector + vector-binary-instances ]; testHaskellDepends = [ base binary containers pipes QuickCheck tasty tasty-quickcheck @@ -33046,6 +33102,7 @@ self: { doHaddock = false; description = "Helps migrating projects to base-compat(-batteries)"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "base-encoding" = callPackage @@ -33484,6 +33541,8 @@ self: { pname = "basic-sop"; version = "0.2.0.2"; sha256 = "0cd5zlv3w3r99ck5cz43kppand0n9vx26g4d4fqqcmvjxk8zwhy7"; + revision = "1"; + editedCabalFile = "0rvhcbywgpidnq1vg79a9scq6hraqdyv67j63vyidm0q20ml5mpv"; libraryHaskellDepends = [ base deepseq generics-sop QuickCheck text ]; @@ -33707,6 +33766,20 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "bazel-runfiles" = callPackage + ({ mkDerivation, base, directory, filepath }: + mkDerivation { + pname = "bazel-runfiles"; + version = "0.7.0.1"; + sha256 = "000awjykargiirnmb3nfqp8dk1p87f5aqx2d07nxrrgflxs7y8ad"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base directory filepath ]; + executableHaskellDepends = [ base filepath ]; + description = "Locate Bazel runfiles location"; + license = stdenv.lib.licenses.asl20; + }) {}; + "bbdb" = callPackage ({ mkDerivation, base, hspec, parsec }: mkDerivation { @@ -34026,13 +34099,14 @@ self: { ({ mkDerivation, base, dunai, MonadRandom, mtl, transformers }: mkDerivation { pname = "bearriver"; - version = "0.10.4.3"; - sha256 = "0d8yhccsg66163cjkdccdjf26rkzv4i7fv454fj9vhylxcggzjin"; + version = "0.10.4.4"; + sha256 = "14aqp6jqca5b4z0bf5q18pq5l9q43bzz18zjwn3j0ns1fakrq5bb"; libraryHaskellDepends = [ base dunai MonadRandom mtl transformers ]; description = "A replacement of Yampa based on Monadic Stream Functions"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "beautifHOL" = callPackage @@ -34050,20 +34124,18 @@ self: { }) {}; "bed-and-breakfast" = callPackage - ({ mkDerivation, array, base, binary, deepseq, QuickCheck + ({ mkDerivation, array, base, binary, cpphs, deepseq, QuickCheck , template-haskell }: mkDerivation { pname = "bed-and-breakfast"; - version = "0.4.3"; - sha256 = "0183770vkb5r9srxqr3fa4s601g10bx07b05hjr3b3nvc0ab9f6z"; - revision = "1"; - editedCabalFile = "0kqdmq6y2fgbknx2lsn1jx2g2n7yizdpzn6wvnnvjaqi945yvyry"; + version = "0.5"; + sha256 = "0dj1vvb9j55psp6yra72wk0k3k6ggvarmzj7zjgr8z3npv5mqmar"; libraryHaskellDepends = [ - array base binary deepseq template-haskell + array base binary cpphs deepseq template-haskell ]; testHaskellDepends = [ base QuickCheck ]; - description = "Efficient Matrix operations in 100% Haskell"; + description = "Efficient Matrix and Vector operations in 100% Haskell"; license = stdenv.lib.licenses.mit; hydraPlatforms = stdenv.lib.platforms.none; }) {}; @@ -34186,8 +34258,8 @@ self: { }: mkDerivation { pname = "bench-show"; - version = "0.2.1"; - sha256 = "1afx5vck4b57r6kanr5g46rk5n8hf9vw4vg2sfqgdb3fhc9979g5"; + version = "0.2.2"; + sha256 = "12fi59j9a98n4q6gjvjsf0hjc2rsy33b7kzjiqxy5wzh8isciaa4"; libraryHaskellDepends = [ ansi-wl-pprint base Chart Chart-diagrams csv directory filepath mwc-random split statistics transformers vector @@ -34237,6 +34309,29 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "bencodex" = callPackage + ({ mkDerivation, attoparsec, base, base64-bytestring, bytestring + , containers, file-embed, filepath, hashable, hlint, hspec + , hspec-attoparsec, hspec-discover, HsYAML, text + , unordered-containers + }: + mkDerivation { + pname = "bencodex"; + version = "1.0.0"; + sha256 = "1ny60qg63kyi12rlk8spc6db40zq3laqfw0k89s0jvnkjlksdyj8"; + libraryHaskellDepends = [ + attoparsec base bytestring hashable text unordered-containers + ]; + testHaskellDepends = [ + base base64-bytestring bytestring containers file-embed filepath + hlint hspec hspec-attoparsec hspec-discover HsYAML text + unordered-containers + ]; + testToolDepends = [ hspec-discover ]; + description = "Bencodex reader/writer for Haskell"; + license = stdenv.lib.licenses.gpl3; + }) {}; + "bencoding" = callPackage ({ mkDerivation, AttoBencode, attoparsec, base, bencode, bytestring , containers, criterion, deepseq, ghc-prim, hspec, integer-gmp, mtl @@ -35247,6 +35342,8 @@ self: { pname = "binary-tagged"; version = "0.1.5.1"; sha256 = "196msm7v0r41d7gx8aghl0c1gvir60sf0w9sfpcz2dq9akzqzjvh"; + revision = "1"; + editedCabalFile = "1z612d3wbrlywcx96lc52svi9b2s6nskdnwnwm3d5mylcqaqckcx"; libraryHaskellDepends = [ aeson array base base16-bytestring binary bytestring containers generics-sop hashable scientific SHA tagged text time @@ -37134,6 +37231,8 @@ self: { pname = "bitwise"; version = "1.0.0.1"; sha256 = "03xyzdkyb99gvm9g5chl07rqbnm7qrxba7wgmrfmal0rkwm0ibkn"; + revision = "1"; + editedCabalFile = "1h6dbjmznd3pvz7j5f8xwaaxxhx57fxszli2k430wcn65bc9y0zs"; libraryHaskellDepends = [ array base bytestring ]; testHaskellDepends = [ base QuickCheck ]; benchmarkHaskellDepends = [ array base bytestring criterion ]; @@ -37165,13 +37264,15 @@ self: { }) {}; "bizzlelude" = callPackage - ({ mkDerivation, base-noprelude, containers, directory, text }: + ({ mkDerivation, base-noprelude, containers, directory, regexpr + , text + }: mkDerivation { pname = "bizzlelude"; - version = "1.2.0"; - sha256 = "1yqp46blrllx5irn1vvvx1v2n06pdfdfmhcng8hvs7q43fcsfgcr"; + version = "1.5.0"; + sha256 = "1mjy5hlszj85wvxwr7fza5wa004xjcg434kwzxzjmmlcvkgh2ybr"; libraryHaskellDepends = [ - base-noprelude containers directory text + base-noprelude containers directory regexpr text ]; description = "A lousy Prelude replacement by a lousy dude"; license = stdenv.lib.licenses.bsd3; @@ -38777,8 +38878,8 @@ self: { pname = "boring"; version = "0.1"; sha256 = "0r263cc8bdwsaw33x96fgd8npsma9a2ffv6mfz9z72d7qclhimkk"; - revision = "1"; - editedCabalFile = "0hdvr4rkkj2mapqha335rhncfmrw70qzjmfis2w9l4iqx617fv9m"; + revision = "2"; + editedCabalFile = "1jxaby4cagbhii194x9x0j75ms1v5bm14sx7d19zz3844mh9qyci"; libraryHaskellDepends = [ adjunctions base base-compat constraints fin generics-sop streams tagged transformers transformers-compat vec @@ -39207,6 +39308,8 @@ self: { pname = "brick"; version = "0.41.2"; sha256 = "04b4gyzb0c66idl19k0v3g9z48bcii728ivbpvm8zjkzq2m2hqix"; + revision = "1"; + editedCabalFile = "00z07bkarxqv517aq95gib864z9mrq9j86zh6jdxybf2v4fwh04s"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -39797,6 +39900,20 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "btrfs_0_2_0_0" = callPackage + ({ mkDerivation, base, bytestring, time, unix }: + mkDerivation { + pname = "btrfs"; + version = "0.2.0.0"; + sha256 = "1h56yb4a3i1c452splxj06c8harrcws2pg86rx7jz6b804ncrzr2"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base bytestring time unix ]; + description = "Bindings to the btrfs API"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "buchhaltung" = callPackage ({ mkDerivation, aeson, ansi-wl-pprint, array, async, base, boxes , bytestring, cassava, containers, data-default, Decimal, deepseq @@ -41402,8 +41519,8 @@ self: { }: mkDerivation { pname = "cabal-debian"; - version = "4.38.1"; - sha256 = "1sniyy2pappjjhvw1bma593gxdcjlg3j2afx8jgb70h6cbl3769n"; + version = "4.38.2"; + sha256 = "1hr2y1jymi835pwm17z4fc0r58fkx3h8vxb03qp4fiadily0lg3s"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -42016,10 +42133,8 @@ self: { ({ mkDerivation, base, Cabal, QuickCheck }: mkDerivation { pname = "cabal-test-quickcheck"; - version = "0.1.8.1"; - sha256 = "0r5fd670a5ch0lzw7wsxp6k06wzi64wvjbiy8zyfl7brmjnbh8gn"; - revision = "1"; - editedCabalFile = "1rq6l86sndcv8nb5nl9rki2kmblrarj9cbra0i6kixa5n1wbcmv6"; + version = "0.1.8.2"; + sha256 = "04fdfxvgp518x7n6d74l92qh67z94pay4wldy8dv4n51zhkgk8bf"; libraryHaskellDepends = [ base Cabal QuickCheck ]; description = "QuickCheck for Cabal"; license = stdenv.lib.licenses.mit; @@ -42509,10 +42624,8 @@ self: { }: mkDerivation { pname = "cacophony"; - version = "0.10.0"; - sha256 = "1hjxzpbnp5qzbjl9m0hyvlr7yflfgxr5kqbviamhpgc0lj5igizv"; - revision = "2"; - editedCabalFile = "0w7nq4c5i89vmslxhvzw8299gig2wrr0ayddqjk5dxghmmly3hdw"; + version = "0.10.1"; + sha256 = "1w9v04mdyzvwndqfb8my9a82b51avgwfnl6g7w89xj37ax9ariaj"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -42968,6 +43081,27 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "canonical-json" = callPackage + ({ mkDerivation, aeson, base, bytestring, containers, parsec + , pretty, QuickCheck, tasty, tasty-quickcheck, unordered-containers + , vector + }: + mkDerivation { + pname = "canonical-json"; + version = "0.5.0.1"; + sha256 = "1r52f69afsnl6kmn0h2rl6wp21jjain4kz6123a1haacfm2f2hwj"; + libraryHaskellDepends = [ + base bytestring containers parsec pretty + ]; + testHaskellDepends = [ + aeson base bytestring QuickCheck tasty tasty-quickcheck + unordered-containers vector + ]; + description = "Canonical JSON for signing and hashing JSON values"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "canteven-config" = callPackage ({ mkDerivation, base, unix, yaml }: mkDerivation { @@ -43179,6 +43313,8 @@ self: { pname = "capnp"; version = "0.3.0.0"; sha256 = "17i7m168bqp57m5lb04sbfh2amc1sicv2jajkl61jb1gsidwdkrz"; + revision = "1"; + editedCabalFile = "0faisbw98h1zjsqja57c0xac6hhnhb4sghzh9a3225pp8wxnbjr7"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -47213,8 +47349,8 @@ self: { }: mkDerivation { pname = "clckwrks"; - version = "0.24.0.7"; - sha256 = "1czalrr7y3526jb4cgi8bghxghqwsjwkfhm5vb4q19xzqg3kjqwy"; + version = "0.24.0.8"; + sha256 = "1csiak0i3aaz56f64509w49q4j21cb10zlxdx8lyhbm8aikva0n1"; enableSeparateDataOutput = true; setupHaskellDepends = [ base Cabal ]; libraryHaskellDepends = [ @@ -47385,8 +47521,8 @@ self: { }: mkDerivation { pname = "clckwrks-plugin-page"; - version = "0.4.3.12"; - sha256 = "0xndx7843laiha1n8xscq13dv6x6fv098v1cdmmzx7qnvfvhhlxj"; + version = "0.4.3.13"; + sha256 = "0fkfsi9hv0hv4zbv2znb0v30z5qvifgmz9875868va0830nv3ibh"; setupHaskellDepends = [ base Cabal ]; libraryHaskellDepends = [ acid-state aeson attoparsec base clckwrks containers directory @@ -47808,8 +47944,8 @@ self: { }: mkDerivation { pname = "cloben"; - version = "0.1.0.3"; - sha256 = "1nzks0p5p0a76jys5dza6iqp48kd1lgxla3k3dfd8znlg9nd7dy2"; + version = "0.1.1.0"; + sha256 = "14vkga43sm995rg4s4npjca7xslgs33kl1ivknbflfidvgpdlxmb"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -49568,19 +49704,21 @@ self: { }) {}; "combinat" = callPackage - ({ mkDerivation, array, base, containers, QuickCheck, random - , test-framework, test-framework-quickcheck2, transformers + ({ mkDerivation, array, base, containers, QuickCheck, random, tasty + , tasty-hunit, tasty-quickcheck, test-framework + , test-framework-quickcheck2, transformers }: mkDerivation { pname = "combinat"; - version = "0.2.8.2"; - sha256 = "0i7hk8518ixwxvxgy9xbf9hcyfpvmcfgz5m3wbxzcj5ry4rnnhnh"; + version = "0.2.9.0"; + sha256 = "1y617qyhqh2k6d51j94c0xnj54i7b86d87n0j12idxlkaiv4j5sw"; libraryHaskellDepends = [ array base containers random transformers ]; testHaskellDepends = [ - array base containers QuickCheck random test-framework - test-framework-quickcheck2 transformers + array base containers QuickCheck random tasty tasty-hunit + tasty-quickcheck test-framework test-framework-quickcheck2 + transformers ]; description = "Generate and manipulate various combinatorial objects"; license = stdenv.lib.licenses.bsd3; @@ -49707,19 +49845,21 @@ self: { }) {}; "comfort-array" = callPackage - ({ mkDerivation, base, guarded-allocation, QuickCheck, transformers - , utility-ht + ({ mkDerivation, base, guarded-allocation, primitive, QuickCheck + , storable-record, transformers, utility-ht }: mkDerivation { pname = "comfort-array"; - version = "0.1.1"; - sha256 = "0kmqb7mcanx3n597nm8p6g76nc4v5smkl5srjmb2757fb3w68xmk"; + version = "0.1.2"; + sha256 = "1rc8gfgjid10wajjk5pp1vmm8wc2apr5qcr2w41pwk25m554iyz1"; libraryHaskellDepends = [ - base guarded-allocation QuickCheck transformers utility-ht + base guarded-allocation primitive QuickCheck storable-record + transformers utility-ht ]; testHaskellDepends = [ base QuickCheck ]; description = "Arrays where the index type is a function of the shape type"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "comfort-graph" = callPackage @@ -50169,8 +50309,8 @@ self: { }: mkDerivation { pname = "compdata-fixplate"; - version = "0.1.2"; - sha256 = "1ljnmwgjllpcrgibfxxb4zghfl76g7951i2r9haycpwmikz7dggz"; + version = "0.1.3"; + sha256 = "1b9xmp2lps9k9fvvpqlha0vkncs4pivixyyqs71zl4dxcrsa8ryx"; libraryHaskellDepends = [ base composition containers deriving-compat fixplate tree-view ]; @@ -50267,8 +50407,8 @@ self: { pname = "complex-generic"; version = "0.1.1.1"; sha256 = "03wb599difj0qm1dpzgxdymq3bql69qmkdk5fspcyc19nnd5qlqz"; - revision = "2"; - editedCabalFile = "160lw045p7j5vm4j2sqqfpnfgkxkil2kwjnmi7x6am03gfi9g9kw"; + revision = "3"; + editedCabalFile = "0vm0i25bib0bzlw7fw209pqn3963y5hx0vkri049q4v7y0qld8k9"; libraryHaskellDepends = [ base template-haskell ]; description = "complex numbers with non-mandatory RealFloat"; license = stdenv.lib.licenses.bsd3; @@ -50548,12 +50688,12 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "composition-prelude_2_0_0_0" = callPackage + "composition-prelude_2_0_1_0" = callPackage ({ mkDerivation, base }: mkDerivation { pname = "composition-prelude"; - version = "2.0.0.0"; - sha256 = "0kz0jr5pfy6d1pm8sbxzrp0h7bnaljspggmzz382p6xp4npr6pg5"; + version = "2.0.1.0"; + sha256 = "027fzappyma8hqqkqka21af937h57fdaq8ni73skxa03pcflwqmc"; libraryHaskellDepends = [ base ]; description = "Higher-order function combinators"; license = stdenv.lib.licenses.bsd3; @@ -50790,8 +50930,8 @@ self: { }: mkDerivation { pname = "concraft"; - version = "0.14.1"; - sha256 = "0v7han8ps1ysxi929clkbx0c0vjd6dyxxhfp8q5k2jx58blwzxyg"; + version = "0.14.2"; + sha256 = "151cp99iah0fd50fkizidcla7f1kvb0jwgl1cj3j6f25j21894dy"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -50837,8 +50977,8 @@ self: { }: mkDerivation { pname = "concraft-pl"; - version = "2.1.1"; - sha256 = "1fznivcsgyjhb62jzk9a3wsv8rmynr7y7473ldbqypkjgy2rmvf2"; + version = "2.4.0"; + sha256 = "0gc50aadzryy1a8mj85i4afgip34w6pk4s2kqsn10910634lmy6h"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -51158,8 +51298,8 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "concurrent-split"; - version = "0.0.1"; - sha256 = "1rxq0l513mldz7rlpmpac7n6mipk4lciv58h77h0zypixy73qyb0"; + version = "0.0.1.1"; + sha256 = "0i9gak7q3ay8g1kzq7dg0bs36bg88n7kwy3h1r6jrni7mz7jh05f"; libraryHaskellDepends = [ base ]; description = "MVars and Channels with distinguished input and output side"; license = stdenv.lib.licenses.bsd3; @@ -51818,8 +51958,8 @@ self: { }: mkDerivation { pname = "confcrypt"; - version = "0.1.0.2"; - sha256 = "0iw47xz34f2dljsq6hm75046sy7wmzj4ndgfh9h3x4iixs5vidfw"; + version = "0.1.0.4"; + sha256 = "1c25xjpnw802pqfjksx5fxjq9ynwfjkkmyad169bvfasry98cdbb"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -51842,6 +51982,7 @@ self: { text transformers ]; license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "confetti" = callPackage @@ -52026,6 +52167,8 @@ self: { pname = "config-value-getopt"; version = "0.1.1.0"; sha256 = "0ypg8wl17vqdqsk1gpaba11v63xmqysfp4cd4ii8zha7pfmlhb4c"; + revision = "1"; + editedCabalFile = "1vdm5pgql8cggdkqxhc2z0cg2s7xayghdm51k0m3lx9396f5pxm8"; libraryHaskellDepends = [ base config-value text ]; description = "Interface between config-value and System.GetOpt"; license = stdenv.lib.licenses.mit; @@ -54289,7 +54432,7 @@ self: { libraryToolDepends = [ c2hs ]; description = "Bindings for libpython"; license = stdenv.lib.licenses.gpl3; - }) {inherit (pkgs) python34;}; + }) {python34 = null;}; "cql" = callPackage ({ mkDerivation, base, bytestring, cereal, containers, Decimal @@ -54746,8 +54889,8 @@ self: { }: mkDerivation { pname = "creatur"; - version = "5.9.25"; - sha256 = "00bhszbjz7in5z1bilb1m3ld5sdd6xk5s95h6cw882qz0i1dmlp5"; + version = "5.9.27"; + sha256 = "016f5rzn2dvd85mdjcdrc7jmy4v75sa4qf98rqyp8qc8cpcqcx4c"; libraryHaskellDepends = [ array base binary bytestring cereal cond directory exceptions filepath gray-extended hdaemonize hsyslog MonadRandom mtl random @@ -54857,8 +55000,8 @@ self: { }: mkDerivation { pname = "crf-chain1-constrained"; - version = "0.5.0"; - sha256 = "194mcafkf23lifmx2n2hnvsaxl0mfdl9zgl9awigddwxvpxsrmjq"; + version = "0.6.0"; + sha256 = "0yzwvzknn0qd8d2b0fqk1lznz8fplv6gx8x5hlmhqmi2f625yav7"; libraryHaskellDepends = [ array base binary containers data-lens data-memocombinators logfloat monad-codec parallel pedestrian-dag random sgd vector @@ -54894,8 +55037,8 @@ self: { }: mkDerivation { pname = "crf-chain2-tiers"; - version = "0.5.0"; - sha256 = "1gwfkvs9lc7ni68n2mxrqx0haawnc8dwx0b73q7a75ysx538f84x"; + version = "0.6.0"; + sha256 = "14vn96vq7ck9xs1gnjmsxi6hr8mlpa6vbr53v2v4lmbav29jqrhr"; libraryHaskellDepends = [ array base binary comonad containers data-lens data-memocombinators logfloat monad-codec parallel pedestrian-dag sgd vector @@ -56495,6 +56638,30 @@ self: { executableHaskellDepends = [ base GLUT Yampa ]; description = "3D Yampa/GLUT Puzzle Game"; license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + + "cuckoo-filter" = callPackage + ({ mkDerivation, aeson, base, cereal, containers, criterion + , hashable, QuickCheck, random, tasty, tasty-hunit + , tasty-quickcheck + }: + mkDerivation { + pname = "cuckoo-filter"; + version = "0.1.0.2"; + sha256 = "16ql9qvf1qsbnk1wxy3d5iqyk0kyx9w27vq284gr34yqd18dpvk5"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ aeson base cereal containers hashable ]; + executableHaskellDepends = [ + aeson base cereal containers criterion hashable random + ]; + testHaskellDepends = [ + aeson base cereal containers hashable QuickCheck tasty tasty-hunit + tasty-quickcheck + ]; + description = "Pure and impure Cuckoo Filter"; + license = stdenv.lib.licenses.mit; }) {}; "cuda" = callPackage @@ -57115,8 +57282,8 @@ self: { ({ mkDerivation, base, doctest, template-haskell }: mkDerivation { pname = "d10"; - version = "0.1.0.0"; - sha256 = "0ymhfarhsryqw0h6nksz9ki640b3xa1613k40hp85mk4rqir0zjq"; + version = "0.2.1.0"; + sha256 = "0dbz1lil7qm0qnn1y5kakh6nyyc3jkv00125vfp9nk2n25yckb9z"; libraryHaskellDepends = [ base template-haskell ]; testHaskellDepends = [ base doctest ]; description = "Digits 0-9"; @@ -59289,8 +59456,8 @@ self: { ({ mkDerivation, base, pretty, syb }: mkDerivation { pname = "data-tree-print"; - version = "0.1.0.1"; - sha256 = "1zh1akyf8vvsqq39vrbn95v5md5in9fvzmz2jz79adh3w5wc5j6f"; + version = "0.1.0.2"; + sha256 = "00jh37anim8qsn553467gmfhajcz1c61zrgh1ypkqsll0gc29vy3"; libraryHaskellDepends = [ base pretty syb ]; description = "Print Data instances as a nested tree"; license = stdenv.lib.licenses.bsd3; @@ -60634,8 +60801,8 @@ self: { ({ mkDerivation, base, singletons }: mkDerivation { pname = "decidable"; - version = "0.1.2.0"; - sha256 = "1dgxkwdazqdlnc6pvqwkx531xajl4ygjm5315dz9ilacgbbl2qss"; + version = "0.1.4.0"; + sha256 = "07cw2jhvii3prsbczxpmq7g492wc89yxp77ivs01gp3bl7m25cky"; libraryHaskellDepends = [ base singletons ]; description = "Combinators for manipulating dependently-typed predicates"; license = stdenv.lib.licenses.bsd3; @@ -61755,6 +61922,8 @@ self: { pname = "deriving-compat"; version = "0.5.2"; sha256 = "0h5jfpwawp7xn9vi82zqskaypa3vypm97lz2farmmfqvnkw60mj9"; + revision = "1"; + editedCabalFile = "1s672vc7w96fmvr1p3fkqi9q80sn860j14545sskpxb8iz9f7sxg"; libraryHaskellDepends = [ base containers ghc-boot-th ghc-prim template-haskell th-abstraction transformers transformers-compat @@ -61810,8 +61979,8 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "descrilo"; - version = "0.1.0.6"; - sha256 = "166x7j8q5wg8iq1bf2qz01ps0b1pbfgizsy1zfhjd98a3zl9fid2"; + version = "0.1.0.7"; + sha256 = "00rk7m54igmrsi8j2fmql7c5wgyg7x5ws8397753470x5k2qv2ap"; libraryHaskellDepends = [ base ]; description = "Loads a list of items with fields"; license = stdenv.lib.licenses.gpl3; @@ -65423,8 +65592,8 @@ self: { }: mkDerivation { pname = "dmcc"; - version = "1.0.0.1"; - sha256 = "1qlw3jx9nn2by757kqask1ib2wi32zgdj53kinj2lnjn5f9qs466"; + version = "1.1.0.0"; + sha256 = "1lrscg4b13wd4gnkg3nsl2ala851lk03p9jxmlxmf2hbf4cl6cnc"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -65978,6 +66147,58 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "docusign-base" = callPackage + ({ mkDerivation, aeson, base, bytestring, data-default, http-media + , lens, servant, servant-client, text + }: + mkDerivation { + pname = "docusign-base"; + version = "0.0.1"; + sha256 = "1qh1g8nyj606x0vapv6m07dhm4s3g5z17g1i4wk5bj63vxvms528"; + libraryHaskellDepends = [ + aeson base bytestring data-default http-media lens servant + servant-client text + ]; + description = "Low-level bindings to the DocuSign API"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "docusign-client" = callPackage + ({ mkDerivation, aeson, base, base64-bytestring, bytestring + , data-default, docusign-base, exceptions, http-client + , http-client-tls, http-types, servant-client, text, uuid + }: + mkDerivation { + pname = "docusign-client"; + version = "0.0.1"; + sha256 = "1vyb7n08vqjmc18adbs6ck01q5440a0r99ahb566v427mr9hcydg"; + libraryHaskellDepends = [ + aeson base base64-bytestring bytestring data-default docusign-base + exceptions http-client http-client-tls http-types servant-client + text uuid + ]; + description = "Client bindings for the DocuSign API"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "docusign-example" = callPackage + ({ mkDerivation, base, bytestring, docusign-base, docusign-client + , exceptions, filepath, optparse-generic, text, uuid + }: + mkDerivation { + pname = "docusign-example"; + version = "0.1.0.0"; + sha256 = "0fhyzmgdjq5rds0p0gifwg6pfsq17yyhj4nwvi6zpgzmww4vya21"; + isLibrary = false; + isExecutable = true; + executableHaskellDepends = [ + base bytestring docusign-base docusign-client exceptions filepath + optparse-generic text uuid + ]; + description = "DocuSign examples"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "docvim" = callPackage ({ mkDerivation, base, bytestring, containers, deepseq, directory , dlist, filepath, hlint, lens, mtl, optparse-applicative, parsec @@ -67077,8 +67298,8 @@ self: { ({ mkDerivation, base, text, xml-types }: mkDerivation { pname = "dtd-types"; - version = "0.3.0.1"; - sha256 = "1w2ni9b8kn242grdqb4wxvgxqpkpp9qy66d57n33l5jghlg8b0s7"; + version = "0.4.0.0"; + sha256 = "1h5ypjnpjim2lwlc6jfp8ixqg7zbkj7fg2kpnlwnyj29n9g58rka"; libraryHaskellDepends = [ base text xml-types ]; description = "Basic types for representing XML DTDs"; license = stdenv.lib.licenses.bsd3; @@ -67294,6 +67515,21 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "dunai_0_5_1" = callPackage + ({ mkDerivation, base, MonadRandom, transformers, transformers-base + }: + mkDerivation { + pname = "dunai"; + version = "0.5.1"; + sha256 = "07bkjp7z5lbm6466nc99p4ngiqkh5mgbczwl7rflxzis4w1vm997"; + libraryHaskellDepends = [ + base MonadRandom transformers transformers-base + ]; + description = "Generalised reactive framework supporting classic, arrowized and monadic FRP"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "dunai-core" = callPackage ({ mkDerivation, base, MonadRandom, transformers, transformers-base }: @@ -68004,8 +68240,8 @@ self: { }: mkDerivation { pname = "easytest"; - version = "0.2"; - sha256 = "1sd9w5p6z9mmvxid6svmnh7h43r32mrcqilb8k7kiy36ln3n8j0b"; + version = "0.2.1"; + sha256 = "0gdyawzlw6d15yz7ji599xjgfr0g7l1iq11ffr4aw3j6g3dc6m8i"; libraryHaskellDepends = [ async base call-stack containers mtl random stm text transformers ]; @@ -68758,21 +68994,23 @@ self: { }) {eibclient = null;}; "eigen" = callPackage - ({ mkDerivation, base, binary, bytestring, mtl, primitive - , transformers, vector + ({ mkDerivation, base, binary, bytestring, constraints, ghc-prim + , mtl, primitive, transformers, vector }: mkDerivation { pname = "eigen"; - version = "3.3.4.1"; - sha256 = "0kpbnl5yrsp9923al5g9x48yf88m4vsdryq69g8fmlh0wdqkdapa"; + version = "3.3.4.2"; + sha256 = "0l88bzp6f5bs5lpcav1c0lg2dc59rfdka2d6dx3c6gzbj1jmf5iz"; libraryHaskellDepends = [ - base binary bytestring primitive transformers vector + base binary bytestring constraints ghc-prim primitive transformers + vector ]; testHaskellDepends = [ - base binary bytestring mtl primitive transformers vector + base binary bytestring ghc-prim mtl primitive transformers vector ]; description = "Eigen C++ library (linear algebra: matrices, sparse matrices, vectors, numerical solvers)"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "either" = callPackage @@ -68920,8 +69158,8 @@ self: { pname = "ekg-core"; version = "0.1.1.4"; sha256 = "0dz9iv6viya7b5nx9gxj9g0d1k155pvb7i59azf9272wl369mn36"; - revision = "2"; - editedCabalFile = "1jky0jf6ajan5zmb46d6p4lv7293kc5gw1bcq5av733g10cwrbdk"; + revision = "3"; + editedCabalFile = "1s3545x9w01rrwzchb4f91ck0n6dc7gf0zwkryqx1b2c95ni5qa8"; libraryHaskellDepends = [ base containers ghc-prim text unordered-containers ]; @@ -70223,8 +70461,8 @@ self: { }: mkDerivation { pname = "entwine"; - version = "0.0.1"; - sha256 = "08yy72lgc8cg12hbz51q06zx7fslhhnk0rjjszba8aj0qbrj8yr4"; + version = "0.0.2"; + sha256 = "08y5vxg6q5f7dakclap86i68if18srzl6q3a9hg7qyrrq6jlyv63"; libraryHaskellDepends = [ async base containers exceptions monad-loops SafeSemaphore stm text time transformers transformers-either @@ -70259,6 +70497,17 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "enum-types" = callPackage + ({ mkDerivation, base }: + mkDerivation { + pname = "enum-types"; + version = "0.1.0.0"; + sha256 = "18qiq6nnnd1c5lkvjafsqd4ypa4xpmx99diq82dz5wy2h95ci2ri"; + libraryHaskellDepends = [ base ]; + description = "small enum types"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "enumerable" = callPackage ({ mkDerivation, base, control-monad-omega, tagged }: mkDerivation { @@ -70502,6 +70751,28 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "envstatus" = callPackage + ({ mkDerivation, base, ConfigFile, mtl, parsec, process, PyF, tasty + , tasty-hspec, unix + }: + mkDerivation { + pname = "envstatus"; + version = "1.0.2"; + sha256 = "1wdvhlmqwzwxv0y3n8xhw5yjy158c7xgiyd0p2zhjghws2p1jvp5"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base ConfigFile mtl parsec process unix + ]; + executableHaskellDepends = [ base ]; + testHaskellDepends = [ + base ConfigFile parsec PyF tasty tasty-hspec + ]; + description = "Display efficiently the state of the local environment"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "envy" = callPackage ({ mkDerivation, base, bytestring, containers, hspec, mtl , QuickCheck, quickcheck-instances, text, time, transformers @@ -72528,13 +72799,14 @@ self: { }: mkDerivation { pname = "exhaustive"; - version = "1.1.6"; - sha256 = "00gdgr9xqzy14sqx31j4afljvfc4ar2jrzmwpp3z6ybfq1saw7vk"; + version = "1.1.7"; + sha256 = "02kv3vv7gz8lqwm5iz4nddyzxp17cgsb6j12lc5kf51l481vpb1z"; libraryHaskellDepends = [ base generics-sop template-haskell transformers ]; description = "Compile time checks that a computation considers producing data through all possible constructors"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "exherbo-cabal" = callPackage @@ -72833,8 +73105,8 @@ self: { pname = "exp-extended"; version = "0.1.1.2"; sha256 = "0ymfnwq103n1paj6wl2cj6szi5nx2h2j1azy3wy4kkw6sk07m00r"; - revision = "2"; - editedCabalFile = "050v0c9l9gi1bxpqbfcl2j9mdiv7xdh1mdfwymxcgpjydv60xwh0"; + revision = "3"; + editedCabalFile = "0gd1jwhhj5qjvfysvrm41zywx3cq6n131ym2x94z68cpswdmv0qn"; libraryHaskellDepends = [ base compensated log-domain ]; description = "floating point with extended exponent range"; license = stdenv.lib.licenses.bsd3; @@ -73311,23 +73583,29 @@ self: { }) {}; "extensible-effects-concurrent" = callPackage - ({ mkDerivation, base, containers, data-default, deepseq, directory - , extensible-effects, filepath, HUnit, lens, logging-effect - , monad-control, mtl, parallel, process, QuickCheck, random, stm - , tagged, tasty, tasty-discover, tasty-hunit, time, transformers + ({ mkDerivation, async, base, containers, data-default, deepseq + , directory, enclosed-exceptions, extensible-effects, filepath + , HUnit, lens, monad-control, mtl, parallel, process, QuickCheck + , stm, tasty, tasty-discover, tasty-hunit, time }: mkDerivation { pname = "extensible-effects-concurrent"; - version = "0.6.2"; - sha256 = "11cqk78c0lfsa8mkq7ymxsral0g24p1im4r1ndqsf7rxczjmc37c"; + version = "0.9.2.2"; + sha256 = "0zw8qvsiblsms9cpmwlg70ix7qlmpgxhm2jdp16j04rvl93zaykw"; + isLibrary = true; + isExecutable = true; libraryHaskellDepends = [ - base containers data-default deepseq directory extensible-effects - filepath lens logging-effect monad-control mtl parallel process - QuickCheck random stm tagged time transformers + async base containers data-default deepseq enclosed-exceptions + extensible-effects filepath lens monad-control mtl parallel process + QuickCheck stm time + ]; + executableHaskellDepends = [ + base data-default deepseq directory extensible-effects filepath + lens ]; testHaskellDepends = [ - base containers deepseq extensible-effects HUnit lens QuickCheck - stm tasty tasty-discover tasty-hunit + base containers data-default deepseq extensible-effects HUnit lens + QuickCheck stm tasty tasty-discover tasty-hunit ]; testToolDepends = [ tasty-discover ]; description = "Message passing concurrency as extensible-effect"; @@ -76462,8 +76740,8 @@ self: { ({ mkDerivation, base, random }: mkDerivation { pname = "fixedprec"; - version = "0.2.2.1"; - sha256 = "0s921nhkmdglmcwzyr048r04dswc6hz7kvh9p4lvd8i2mxq0szgi"; + version = "0.2.2.2"; + sha256 = "01ss9rzg2r4gii6f7771n4vdyg022skyws6ncc3l62xycgz153a7"; libraryHaskellDepends = [ base random ]; description = "A fixed-precision real number type"; license = stdenv.lib.licenses.bsd3; @@ -77275,21 +77553,21 @@ self: { "fltkhs" = callPackage ({ mkDerivation, base, bytestring, c2hs, Cabal, directory, filepath - , mtl, parsec, text + , mtl, parsec, pkg-config, text, vector }: mkDerivation { pname = "fltkhs"; - version = "0.5.4.5"; - sha256 = "17iqpnn0zgwifb937kllkfyz8qf37da90z8iyay348gy3siwjxic"; + version = "0.6.0.0"; + sha256 = "1cbyp8rq9yzx6jrw68dbprkdyd8pkdqbxx08wajyg7bfks6j39cb"; isLibrary = true; isExecutable = true; setupHaskellDepends = [ base Cabal directory filepath ]; - libraryHaskellDepends = [ base bytestring text ]; - libraryToolDepends = [ c2hs ]; + libraryHaskellDepends = [ base bytestring text vector ]; + libraryToolDepends = [ c2hs pkg-config ]; executableHaskellDepends = [ base directory filepath mtl parsec ]; description = "FLTK bindings"; license = stdenv.lib.licenses.mit; - }) {}; + }) {pkg-config = null;}; "fltkhs-demos" = callPackage ({ mkDerivation, base, bytestring, directory, fltkhs, process, stm @@ -77349,6 +77627,24 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "fltkhs-themes" = callPackage + ({ mkDerivation, base, bytestring, Cabal, fltkhs, fontconfig + , load-font, text, vector + }: + mkDerivation { + pname = "fltkhs-themes"; + version = "0.1.0.1"; + sha256 = "03awhraincinrqr1zzb9c64mkb391isw3gb87csa1dkqk846wij6"; + enableSeparateDataOutput = true; + setupHaskellDepends = [ base Cabal ]; + libraryHaskellDepends = [ + base bytestring fltkhs load-font text vector + ]; + librarySystemDepends = [ fontconfig ]; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {inherit (pkgs) fontconfig;}; + "fluent-logger" = callPackage ({ mkDerivation, attoparsec, base, bytestring, cereal , cereal-conduit, conduit, conduit-extra, containers, criterion @@ -77540,10 +77836,8 @@ self: { }: mkDerivation { pname = "fmt"; - version = "0.6"; - sha256 = "14hk6ra8j1zzw7ibimj207mi1xl5pmln6kyz0y66j4bg1r8invsy"; - revision = "1"; - editedCabalFile = "0xmi4qxq12qfj4ry1ifb0za7jdlvj65v16bzdqi8r7p1xrxy5cki"; + version = "0.6.1"; + sha256 = "1c6a0nrm90drs13s1hry9xs8j7dx37j21f7kllpx5s240nqy4c6c"; libraryHaskellDepends = [ base base64-bytestring bytestring containers formatting microlens text time time-locale-compat @@ -78878,8 +79172,8 @@ self: { }: mkDerivation { pname = "free-algebras"; - version = "0.0.5.1"; - sha256 = "1h8966am7j0xdqq2vmfj2cyrzmkd70bs1kx9fpx1bgn1acdpg1xa"; + version = "0.0.6.0"; + sha256 = "1332awl3aps1zw537ym18jp1d5igwsnpk3acmrznks7vfsdr27as"; libraryHaskellDepends = [ base constraints containers data-fix dlist free groups kan-extensions mtl natural-numbers transformers @@ -78893,6 +79187,17 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "free-category" = callPackage + ({ mkDerivation, base, free-algebras }: + mkDerivation { + pname = "free-category"; + version = "0.0.1.0"; + sha256 = "0cpcn10kbsx1xvvxvvcx5hpa0p9vhkrjf7cmzva2zpmhdj4jp5rg"; + libraryHaskellDepends = [ base free-algebras ]; + description = "Free category"; + license = stdenv.lib.licenses.mpl20; + }) {}; + "free-concurrent" = callPackage ({ mkDerivation, base, type-aligned }: mkDerivation { @@ -79289,6 +79594,32 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "freer-simple_1_2_0_0" = callPackage + ({ mkDerivation, base, criterion, extensible-effects, free, mtl + , natural-transformation, QuickCheck, tasty, tasty-hunit + , tasty-quickcheck, template-haskell, transformers-base + }: + mkDerivation { + pname = "freer-simple"; + version = "1.2.0.0"; + sha256 = "1z0f0m03szzcy1s6msqdlaj266dq0bkkwlwcr7p28xv7lj6gxgdb"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base natural-transformation template-haskell transformers-base + ]; + executableHaskellDepends = [ base ]; + testHaskellDepends = [ + base QuickCheck tasty tasty-hunit tasty-quickcheck + ]; + benchmarkHaskellDepends = [ + base criterion extensible-effects free mtl + ]; + description = "Implementation of a friendly effect system for Haskell"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "freesect" = callPackage ({ mkDerivation, array, base, cpphs, directory, mtl, parallel , pretty, random, syb @@ -80487,6 +80818,19 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "fused-effects" = callPackage + ({ mkDerivation, base, deepseq, doctest, hspec, MonadRandom, random + }: + mkDerivation { + pname = "fused-effects"; + version = "0.1.1.0"; + sha256 = "1wcrixfpz0q93xskb90p8a2jypsghbpgwn4fjy6k1ad4ihxn19hl"; + libraryHaskellDepends = [ base deepseq MonadRandom random ]; + testHaskellDepends = [ base doctest hspec ]; + description = "A fast, flexible, fused effect system"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "fusion" = callPackage ({ mkDerivation, base, directory, doctest, filepath, pipes-safe , transformers, void @@ -80502,6 +80846,62 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "futhark" = callPackage + ({ mkDerivation, aeson, alex, ansi-terminal, array, base + , bifunctors, binary, blaze-html, bytestring, containers + , data-binary-ieee754, directory, directory-tree, dlist, extra + , file-embed, filepath, free, gitrev, happy, haskeline, http-client + , http-client-tls, http-conduit, HUnit, language-c-quote + , mainland-pretty, markdown, megaparsec, mtl, neat-interpolation + , parallel, parser-combinators, process, process-extras, QuickCheck + , random, raw-strings-qq, regex-tdfa, srcloc, tasty, tasty-hunit + , tasty-quickcheck, template-haskell, temporary, text + , th-lift-instances, time, transformers, vector + , vector-binary-instances, versions, zip-archive, zlib + }: + mkDerivation { + pname = "futhark"; + version = "0.7.4"; + sha256 = "1qjcza0i0y6qalyim5kclz3x4lj667d4d4y2amk3sn4qbgaibajs"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + ansi-terminal array base bifunctors binary blaze-html bytestring + containers data-binary-ieee754 directory directory-tree dlist extra + file-embed filepath free gitrev http-client http-client-tls + http-conduit language-c-quote mainland-pretty markdown megaparsec + mtl neat-interpolation parallel parser-combinators process + process-extras raw-strings-qq regex-tdfa srcloc template-haskell + text th-lift-instances time transformers vector + vector-binary-instances versions zip-archive zlib + ]; + libraryToolDepends = [ alex happy ]; + executableHaskellDepends = [ + aeson ansi-terminal array base bifunctors binary blaze-html + bytestring containers data-binary-ieee754 directory directory-tree + dlist extra file-embed filepath free gitrev haskeline http-client + http-client-tls http-conduit language-c-quote mainland-pretty + markdown megaparsec mtl neat-interpolation parallel + parser-combinators process process-extras random raw-strings-qq + regex-tdfa srcloc template-haskell temporary text th-lift-instances + time transformers vector vector-binary-instances versions + zip-archive zlib + ]; + testHaskellDepends = [ + ansi-terminal array base bifunctors binary blaze-html bytestring + containers data-binary-ieee754 directory directory-tree dlist extra + file-embed filepath free gitrev http-client http-client-tls + http-conduit HUnit language-c-quote mainland-pretty markdown + megaparsec mtl neat-interpolation parallel parser-combinators + process process-extras QuickCheck raw-strings-qq regex-tdfa srcloc + tasty tasty-hunit tasty-quickcheck template-haskell text + th-lift-instances time transformers vector vector-binary-instances + versions zip-archive zlib + ]; + description = "An optimising compiler for a functional, array-oriented language"; + license = stdenv.lib.licenses.isc; + }) {}; + "futun" = callPackage ({ mkDerivation, base, bytestring, network, unix }: mkDerivation { @@ -81949,14 +82349,14 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "generics-sop_0_4_0_0" = callPackage + "generics-sop_0_4_0_1" = callPackage ({ mkDerivation, base, criterion, deepseq, ghc-prim, sop-core , template-haskell }: mkDerivation { pname = "generics-sop"; - version = "0.4.0.0"; - sha256 = "0blx09k173qgaghqnsvz6v2r6san1kn62k5c57wilya94l1996ra"; + version = "0.4.0.1"; + sha256 = "160knr2phnzh2gldfv954lz029jzc7y8kz5xpmbf4z3vb5ngm6fw"; libraryHaskellDepends = [ base ghc-prim sop-core template-haskell ]; @@ -81975,8 +82375,8 @@ self: { pname = "generics-sop-lens"; version = "0.1.2.1"; sha256 = "0p2ji955hy9r6c1wmiziga9pbbli24my3vmx19gf4i8db36d8jaf"; - revision = "5"; - editedCabalFile = "1q6953xi46qvbknaq2j8x2zqmk2q1mmf8xczjyib3abxz0rp3608"; + revision = "6"; + editedCabalFile = "0j4j3kk2nsl5n5gp0vrzqdc5y9ly31b4nvhq0bpgcpzibvik7ssw"; libraryHaskellDepends = [ base generics-sop lens ]; description = "Lenses for types in generics-sop"; license = stdenv.lib.licenses.bsd3; @@ -83181,8 +83581,8 @@ self: { }: mkDerivation { pname = "ghc-events"; - version = "0.8.0"; - sha256 = "1wdxap20wh8sdaqnpsk463mihg6v3va786zb1amgzrcjpsv49is5"; + version = "0.8.0.1"; + sha256 = "1658lr4av48y8m0p5fs3sjxkkbdkwdf6m02byzw69gqg3xzz1i99"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -83265,15 +83665,15 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "ghc-exactprint_0_5_8_1" = callPackage + "ghc-exactprint_0_5_8_2" = callPackage ({ mkDerivation, base, bytestring, containers, Diff, directory , filemanip, filepath, free, ghc, ghc-boot, ghc-paths, HUnit, mtl , silently, syb }: mkDerivation { pname = "ghc-exactprint"; - version = "0.5.8.1"; - sha256 = "1qjl137f4lpadkgdyfjnkkga8vqyw0x27plpyw57aqhc8qmcylhh"; + version = "0.5.8.2"; + sha256 = "18wlhvgpbk7ym1vbi8fkdwbjhcplgr7zcqm328yi4v7rilbxw7cn"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -84894,8 +85294,8 @@ self: { }: mkDerivation { pname = "gi-gtk-hs"; - version = "0.3.6.2"; - sha256 = "04gksr27nqzx77c8kv2c94ysf1pz3nwhvnxvbz8h7cn4hzvzhb8z"; + version = "0.3.6.3"; + sha256 = "0xnrssnfaz57akrkgpf1cm3d4lg3cmlh0b8yp6w9pdsbp0lld2ay"; libraryHaskellDepends = [ base base-compat containers gi-gdk gi-gdkpixbuf gi-glib gi-gobject gi-gtk haskell-gi-base mtl text transformers @@ -84948,18 +85348,18 @@ self: { }) {gtksourceview3 = pkgs.gnome3.gtksourceview;}; "gi-javascriptcore" = callPackage - ({ mkDerivation, base, bytestring, Cabal, containers, haskell-gi - , haskell-gi-base, haskell-gi-overloading, text, transformers - , webkitgtk + ({ mkDerivation, base, bytestring, Cabal, containers, gi-glib + , gi-gobject, haskell-gi, haskell-gi-base, haskell-gi-overloading + , text, transformers, webkitgtk }: mkDerivation { pname = "gi-javascriptcore"; - version = "4.0.15"; - sha256 = "07dz5kisis93x0ywb207w8nv54bfdgsahq325dyvbfvlgkqrxsh3"; + version = "4.0.16"; + sha256 = "0kihq9sp42k2k9j8qrwgja62i5pzwhc1z1yy6h19n56aikddfc2z"; setupHaskellDepends = [ base Cabal haskell-gi ]; libraryHaskellDepends = [ - base bytestring containers haskell-gi haskell-gi-base - haskell-gi-overloading text transformers + base bytestring containers gi-glib gi-gobject haskell-gi + haskell-gi-base haskell-gi-overloading text transformers ]; libraryPkgconfigDepends = [ webkitgtk ]; doHaddock = false; @@ -85318,18 +85718,19 @@ self: { }) {}; "gingersnap" = callPackage - ({ mkDerivation, aeson, base, bytestring, http-types - , postgresql-simple, resource-pool, snap-core + ({ mkDerivation, aeson, base, bytestring, deepseq, http-types + , postgresql-simple, resource-pool, snap-core, text, transformers + , unordered-containers }: mkDerivation { pname = "gingersnap"; - version = "0.1.1.0"; - sha256 = "0aqb9ikh21q13mnwf6vcg6chv73vphyag62zhkd4mkhbnlpr816i"; + version = "0.2.2.3"; + sha256 = "1w1ip80w9bc5gj0ws6cvk37648267b4fqmh81h2khn7qhdah74k7"; libraryHaskellDepends = [ - aeson base bytestring http-types postgresql-simple resource-pool - snap-core + aeson base bytestring deepseq http-types postgresql-simple + resource-pool snap-core text transformers unordered-containers ]; - description = "snap-core + aeson + postgresql-simple = delicious"; + description = "Tools for consistent and safe JSON APIs with snap-core and postgresql-simple"; license = stdenv.lib.licenses.bsd3; }) {}; @@ -85493,19 +85894,20 @@ self: { , edit-distance, esqueleto, exceptions, fdo-notify, feed, filepath , free, git, gnupg, hinotify, hslogger, http-client , http-client-tls, http-conduit, http-types, IfElse, lsof, magic - , memory, monad-control, monad-logger, mountpoints, mtl, network - , network-info, network-multicast, network-uri, old-locale, openssh - , optparse-applicative, perl, persistent, persistent-sqlite - , persistent-template, process, QuickCheck, random, regex-tdfa - , resourcet, rsync, SafeSemaphore, sandi, securemem, socks, split - , stm, stm-chans, tagsoup, tasty, tasty-hunit, tasty-quickcheck - , tasty-rerun, text, time, torrent, transformers, unix, unix-compat - , unordered-containers, utf8-string, uuid, vector, wget, which + , memory, microlens, monad-control, monad-logger, mountpoints, mtl + , network, network-info, network-multicast, network-uri, old-locale + , openssh, optparse-applicative, perl, persistent + , persistent-sqlite, persistent-template, process, QuickCheck + , random, regex-tdfa, resourcet, rsync, SafeSemaphore, sandi + , securemem, socks, split, stm, stm-chans, tagsoup, tasty + , tasty-hunit, tasty-quickcheck, tasty-rerun, text, time, torrent + , transformers, unix, unix-compat, unordered-containers + , utf8-string, uuid, vector, wget, which }: mkDerivation { pname = "git-annex"; - version = "6.20181011"; - sha256 = "0k18vrk5g9fdlhvklg14fyjk7x9css18i82xzl8wsycjbcq9ncgf"; + version = "7.20181105"; + sha256 = "0jh49bfgsccrvhdgyp1xp5rj0vp9iz8kkmh1x5cmrsjajs8qdpw3"; configureFlags = [ "-fassistant" "-fcryptonite" "-fdbus" "-fdesktopnotify" "-fdns" "-ffeed" "-finotify" "-fpairing" "-fproduction" "-fquvi" "-f-s3" @@ -85524,7 +85926,7 @@ self: { crypto-api cryptonite data-default DAV dbus directory disk-free-space dlist edit-distance esqueleto exceptions fdo-notify feed filepath free hinotify hslogger http-client http-client-tls - http-conduit http-types IfElse magic memory monad-control + http-conduit http-types IfElse magic memory microlens monad-control monad-logger mountpoints mtl network network-info network-multicast network-uri old-locale optparse-applicative persistent persistent-sqlite persistent-template process QuickCheck random @@ -87829,6 +88231,29 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "godot-haskell" = callPackage + ({ mkDerivation, aeson, ansi-wl-pprint, base, bytestring, c2hs + , casing, colour, containers, lens, linear, mtl, parsec, parsers + , stm, template-haskell, text, unordered-containers, vector + }: + mkDerivation { + pname = "godot-haskell"; + version = "0.1.0.0"; + sha256 = "02nvs84bq4nif235iycjwkxmabvs0avwm2xilpwv8kddv95z1f8i"; + revision = "3"; + editedCabalFile = "0dpvraw31gpzzlsy7j7mv99jvmwhldycll1hnbw2iscb5zs2g409"; + libraryHaskellDepends = [ + aeson ansi-wl-pprint base bytestring casing colour containers lens + linear mtl parsec parsers stm template-haskell text + unordered-containers vector + ]; + libraryToolDepends = [ c2hs ]; + doHaddock = false; + description = "Haskell bindings for the Godot game engine API"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "gofer-prelude" = callPackage ({ mkDerivation, base, ghc-prim }: mkDerivation { @@ -89307,8 +89732,8 @@ self: { }: mkDerivation { pname = "google-maps-geocoding"; - version = "0.4.0.1"; - sha256 = "1icya5sh7psr2m12wdx6a5dq9897lp92gq1skxp6s55sksqvglw8"; + version = "0.4.0.2"; + sha256 = "0q5zack0lcmn8wsksdlmd0vch1lizia9h4sqax7ydx09is39jzxm"; libraryHaskellDepends = [ aeson base google-static-maps http-client servant servant-client text @@ -89434,8 +89859,8 @@ self: { }: mkDerivation { pname = "google-static-maps"; - version = "0.5.0.2"; - sha256 = "05gxk4xnxlshcais8ljzp2wbr93kfi97bjbk2rasj5s2mbvw7rvi"; + version = "0.5.0.3"; + sha256 = "18c4s9nvpwv34djf7m2jq5mdpyjplp1hcxrfrp5cdyglk6j0j13b"; libraryHaskellDepends = [ aeson base base64-bytestring bytedump bytestring cryptonite double-conversion http-client JuicyPixels memory network-uri @@ -90570,8 +90995,8 @@ self: { ({ mkDerivation, base, containers, json, text }: mkDerivation { pname = "graphql-w-persistent"; - version = "0.1.0.4"; - sha256 = "1ivdh8l6snb2d3g1f7fb46fd9fz6ib2i94b1596pmp38hryl8in0"; + version = "0.1.0.7"; + sha256 = "13fbx5vzg2fq9883hdf8djbc47lyia6n4sshwz3dhg5bjpni7l1x"; libraryHaskellDepends = [ base containers json text ]; description = "Haskell GraphQL query parser-interpreter-data processor"; license = stdenv.lib.licenses.isc; @@ -91554,8 +91979,8 @@ self: { }: mkDerivation { pname = "gssapi-wai"; - version = "0.1.2.2"; - sha256 = "1fkgsdc4nkxwkhnz3b8rz6zx8jq6325mgniy5h5s3cr7k0kwnv0s"; + version = "0.1.2.3"; + sha256 = "08c47zwy4wh1cga5l4brg7dm5nkl7xcsq2rvwdzvmzzxyfg3nnr7"; libraryHaskellDepends = [ base base64-bytestring bytestring case-insensitive gssapi http-types vault wai wai-extra @@ -93543,8 +93968,8 @@ self: { }: mkDerivation { pname = "hackage-whatsnew"; - version = "0.1.1"; - sha256 = "140qsl0aqw2zg246inijifvcddmirba613as0hrg11hkd52f6fhr"; + version = "0.1.2"; + sha256 = "19nk01jqfirvr8c3wy6pacq32v5lzxi735r8i6d23d0vwjfmqxnk"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -94005,8 +94430,8 @@ self: { }: mkDerivation { pname = "hadolint"; - version = "1.13.0"; - sha256 = "1z5qaxslshd1adkhqcpx8m8fs8d3dw4vwbwvsqcpm7gis63qhbqg"; + version = "1.15.0"; + sha256 = "13xpbwnh6xs3lj6vgqanww3ipz8bsfh3q305rkrb7kgl338nqgsm"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -95403,24 +95828,27 @@ self: { "hapistrano" = callPackage ({ mkDerivation, aeson, async, base, directory, filepath , formatting, gitrev, hspec, mtl, optparse-applicative, path - , path-io, process, stm, temporary, time, transformers, yaml + , path-io, process, QuickCheck, stm, temporary, time, transformers + , yaml }: mkDerivation { pname = "hapistrano"; - version = "0.3.6.1"; - sha256 = "0g0i0n952zjvysjrsp4srhqgrq5fyy7kdinixsxazpccf01f229y"; + version = "0.3.7.0"; + sha256 = "16d1y3dwbvj76b1yyghvwi4f7wak1dv6l07ymknrbi42ks0w9041"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; libraryHaskellDepends = [ - base filepath formatting gitrev mtl path process time transformers + aeson base filepath formatting gitrev mtl path process time + transformers ]; executableHaskellDepends = [ aeson async base formatting gitrev optparse-applicative path path-io stm yaml ]; testHaskellDepends = [ - base directory filepath hspec mtl path path-io process temporary + base directory filepath hspec mtl path path-io process QuickCheck + temporary ]; description = "A deployment library for Haskell applications"; license = stdenv.lib.licenses.mit; @@ -97595,6 +98023,7 @@ self: { testHaskellDepends = [ base eigen vector ]; description = "Some utility functions for haskell-eigen library"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "haskell-exp-parser" = callPackage @@ -97937,7 +98366,7 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "haskell-lsp_0_8_0_0" = callPackage + "haskell-lsp_0_8_0_1" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, data-default , directory, filepath, hashable, haskell-lsp-types, hslogger, hspec , lens, mtl, network-uri, parsec, sorted-list, stm, text, time @@ -97945,8 +98374,8 @@ self: { }: mkDerivation { pname = "haskell-lsp"; - version = "0.8.0.0"; - sha256 = "04mihj4538pys6v4m3dwijfzcpsv52jizm416rnnwc88gr8q6wkk"; + version = "0.8.0.1"; + sha256 = "1lvrqxp6v5xvha88l8r6n86ydvlszzxmi7fazvjxz4bixy9zvw8q"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -98005,15 +98434,15 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "haskell-lsp-types_0_8_0_0" = callPackage + "haskell-lsp-types_0_8_0_1" = callPackage ({ mkDerivation, aeson, base, bytestring, data-default, filepath , hashable, lens, network-uri, scientific, text , unordered-containers }: mkDerivation { pname = "haskell-lsp-types"; - version = "0.8.0.0"; - sha256 = "11dm7v9rvfig6m40m0np7cs5cfaawwpw67c445dz15vls5pri71n"; + version = "0.8.0.1"; + sha256 = "0czh6fqrzzp5xkawwiia5n437pmch41rnkp166lpvglfqg4gx8y8"; libraryHaskellDepends = [ aeson base bytestring data-default filepath hashable lens network-uri scientific text unordered-containers @@ -98571,6 +99000,8 @@ self: { pname = "haskell-src-meta"; version = "0.8.0.3"; sha256 = "08jq156zv4m0fjq6712n99c1jwxnpa6kj6sq8ch0r1l0a1ay6ww4"; + revision = "2"; + editedCabalFile = "0dp5v0yd0wgijzaggr22glgjswpa65hy84h8awdzd9d78g2fjz6c"; libraryHaskellDepends = [ base haskell-src-exts pretty syb template-haskell th-orphans ]; @@ -99832,8 +100263,8 @@ self: { }: mkDerivation { pname = "haskoin-node"; - version = "0.9.2"; - sha256 = "1aiqhw7fk6h70ps5svbhhhk577ai0rqk6s4bm00ii4yhnbdrdk60"; + version = "0.9.4"; + sha256 = "1lwlbi5pw9wngmhk6dkyc05ahq1w1a0jxipkf9g5spq7ipfw4v6y"; libraryHaskellDepends = [ base bytestring cereal conduit conduit-extra data-default hashable haskoin-core monad-logger mtl network nqe random resourcet @@ -99895,31 +100326,34 @@ self: { }) {}; "haskoin-store" = callPackage - ({ mkDerivation, aeson, base, bytestring, cereal, conduit - , containers, directory, filepath, haskoin-core, haskoin-node - , hspec, http-types, monad-logger, mtl, network, nqe - , optparse-applicative, random, rocksdb-haskell, rocksdb-query - , scotty, string-conversions, text, time, transformers, unliftio + ({ mkDerivation, aeson, base, binary, bytestring, cereal, conduit + , containers, data-default, directory, filepath, hashable + , haskoin-core, haskoin-node, hspec, http-types, monad-logger, mtl + , network, nqe, optparse-applicative, random, rocksdb-haskell + , rocksdb-query, scotty, string-conversions, text, time + , transformers, unliftio, unordered-containers }: mkDerivation { pname = "haskoin-store"; - version = "0.2.3"; - sha256 = "0ywfmqdwvw07gx4a413i0ffsgrq2gfjgpw8a6f78h6idiw69shkw"; + version = "0.6.1"; + sha256 = "0jgsf4f3qyq60dbyyni0d1cdphabf8ix4l0y1iiql5ii2fy50dw2"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - aeson base bytestring cereal conduit containers haskoin-core - haskoin-node monad-logger mtl network nqe random rocksdb-haskell - rocksdb-query string-conversions text time transformers unliftio + aeson base bytestring cereal conduit containers data-default + hashable haskoin-core haskoin-node monad-logger mtl network nqe + random rocksdb-haskell rocksdb-query string-conversions text time + transformers unliftio unordered-containers ]; executableHaskellDepends = [ - aeson base bytestring conduit directory filepath haskoin-core - haskoin-node http-types monad-logger nqe optparse-applicative - rocksdb-haskell scotty string-conversions text unliftio + aeson base binary bytestring cereal conduit data-default directory + filepath haskoin-core haskoin-node http-types monad-logger nqe + optparse-applicative rocksdb-haskell scotty string-conversions text + transformers unliftio unordered-containers ]; testHaskellDepends = [ - base haskoin-core haskoin-node hspec monad-logger mtl nqe - rocksdb-haskell unliftio + base data-default haskoin-core haskoin-node hspec monad-logger mtl + nqe rocksdb-haskell transformers unliftio unordered-containers ]; description = "Storage and index for Bitcoin and Bitcoin Cash"; license = stdenv.lib.licenses.publicDomain; @@ -100165,6 +100599,264 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "hasktorch" = callPackage + ({ mkDerivation, backprop, base, dimensions, generic-lens + , ghc-typelits-natnormalise, hasktorch-ffi-th, hasktorch-ffi-thc + , hasktorch-indef, hasktorch-signatures-partial, hasktorch-types-th + , hasktorch-types-thc, hspec, microlens-platform, monad-loops, mtl + , QuickCheck, safe-exceptions, singletons, text, time, transformers + }: + mkDerivation { + pname = "hasktorch"; + version = "0.0.1.0"; + sha256 = "10lmas8x4nk7z7phxj1a2bhzjz7qhbmy472f9j584mbagvklfkmc"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base dimensions hasktorch-ffi-th hasktorch-ffi-thc hasktorch-indef + hasktorch-signatures-partial hasktorch-types-th hasktorch-types-thc + safe-exceptions singletons text + ]; + executableHaskellDepends = [ base ]; + testHaskellDepends = [ + backprop base dimensions generic-lens ghc-typelits-natnormalise + hspec microlens-platform monad-loops mtl QuickCheck singletons time + transformers + ]; + doHaddock = false; + description = "Torch for tensors and neural networks in Haskell"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + + "hasktorch-codegen" = callPackage + ({ mkDerivation, base, containers, directory, hashable, hspec + , hspec-discover, megaparsec, optparse-applicative, pretty-show + , QuickCheck, text, unordered-containers + }: + mkDerivation { + pname = "hasktorch-codegen"; + version = "0.0.1.1"; + sha256 = "0yygx1w7i9mnyxrqzz94vrni5y7rkn92yycax7rqg2r5cds2xb6g"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base containers directory hashable megaparsec pretty-show text + unordered-containers + ]; + executableHaskellDepends = [ + base optparse-applicative pretty-show + ]; + testHaskellDepends = [ + base containers hspec hspec-discover megaparsec pretty-show + QuickCheck text + ]; + testToolDepends = [ hspec-discover ]; + description = "Code generation tools for Hasktorch"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "hasktorch-ffi-tests" = callPackage + ({ mkDerivation, base, hasktorch-types-th, hspec, QuickCheck, text + }: + mkDerivation { + pname = "hasktorch-ffi-tests"; + version = "0.0.1.0"; + sha256 = "0850v3wqf0x5hkk5py7k1glh591p59fs1y1kn2jf2giqmy05qzlc"; + libraryHaskellDepends = [ + base hasktorch-types-th hspec QuickCheck text + ]; + description = "Testing library for Hasktorch's FFI bindings"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "hasktorch-ffi-th" = callPackage + ({ mkDerivation, ATen, base, c2hs, hasktorch-ffi-tests + , hasktorch-types-th, hspec, inline-c, QuickCheck, text + }: + mkDerivation { + pname = "hasktorch-ffi-th"; + version = "0.0.1.0"; + sha256 = "10gdvkwcjjzmrvmlz8vf823ja1jpab1nrph5lq46fcz8nqycsjq0"; + libraryHaskellDepends = [ base hasktorch-types-th inline-c text ]; + librarySystemDepends = [ ATen ]; + libraryToolDepends = [ c2hs ]; + testHaskellDepends = [ + base hasktorch-ffi-tests hasktorch-types-th hspec QuickCheck text + ]; + description = "Bindings to Torch"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {ATen = null;}; + + "hasktorch-ffi-thc" = callPackage + ({ mkDerivation, ATen, base, c2hs, hasktorch-ffi-tests + , hasktorch-ffi-th, hasktorch-types-th, hasktorch-types-thc, hspec + , inline-c, QuickCheck, text + }: + mkDerivation { + pname = "hasktorch-ffi-thc"; + version = "0.0.1.0"; + sha256 = "0l3xvhdyn2dzw999fbhihl20s3q01r5vp247d0rh27zvyszg7l3y"; + libraryHaskellDepends = [ + base hasktorch-types-th hasktorch-types-thc inline-c text + ]; + librarySystemDepends = [ ATen ]; + libraryToolDepends = [ c2hs ]; + testHaskellDepends = [ + base hasktorch-ffi-tests hasktorch-ffi-th hasktorch-types-th + hasktorch-types-thc hspec QuickCheck text + ]; + description = "Bindings to Cutorch"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {ATen = null;}; + + "hasktorch-indef" = callPackage + ({ mkDerivation, backprop, base, containers, deepseq, dimensions + , ghc-typelits-natnormalise, hasktorch-ffi-th, hasktorch-signatures + , hasktorch-signatures-partial, hasktorch-signatures-support + , hasktorch-types-th, hspec, managed, mtl, QuickCheck + , safe-exceptions, singletons, text, transformers, vector + }: + mkDerivation { + pname = "hasktorch-indef"; + version = "0.0.1.0"; + sha256 = "0xmz7jid3sg3d2b4q1051fs7g0fljgvqxqwhzhd4g85fx7zr5nk3"; + libraryHaskellDepends = [ + backprop base containers deepseq dimensions + ghc-typelits-natnormalise hasktorch-ffi-th hasktorch-signatures + hasktorch-signatures-partial hasktorch-signatures-support + hasktorch-types-th managed mtl safe-exceptions singletons text + transformers vector + ]; + testHaskellDepends = [ + backprop base dimensions ghc-typelits-natnormalise hasktorch-ffi-th + hasktorch-types-th hspec mtl QuickCheck singletons text + transformers + ]; + doHaddock = false; + description = "Core Hasktorch abstractions wrapping FFI bindings"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + + "hasktorch-signatures" = callPackage + ({ mkDerivation, base, hasktorch-ffi-th, hasktorch-ffi-thc + , hasktorch-signatures-partial, hasktorch-signatures-support + , hasktorch-signatures-types, hasktorch-types-th + , hasktorch-types-thc + }: + mkDerivation { + pname = "hasktorch-signatures"; + version = "0.0.1.0"; + sha256 = "1p8c3h0naqcbjxb3jbiss9zgfyg0hj0wcb6qlid6kwy925i4cyk1"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base hasktorch-signatures-partial hasktorch-signatures-support + hasktorch-signatures-types hasktorch-types-th hasktorch-types-thc + ]; + executableHaskellDepends = [ + base hasktorch-ffi-th hasktorch-ffi-thc hasktorch-types-th + hasktorch-types-thc + ]; + doHaddock = false; + description = "Backpack signatures for Tensor operations"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + + "hasktorch-signatures-partial" = callPackage + ({ mkDerivation, base, hasktorch-signatures-types + , hasktorch-types-th + }: + mkDerivation { + pname = "hasktorch-signatures-partial"; + version = "0.0.1.0"; + sha256 = "12dc5i4818j4q09mdshygz16zq1zyp32k6c1imgp9dl6bl4l05ss"; + libraryHaskellDepends = [ + base hasktorch-signatures-types hasktorch-types-th + ]; + description = "Functions to partially satisfy tensor signatures"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + + "hasktorch-signatures-support" = callPackage + ({ mkDerivation, base, hasktorch-signatures-types + , hasktorch-types-th + }: + mkDerivation { + pname = "hasktorch-signatures-support"; + version = "0.0.1.0"; + sha256 = "1vfmpsmgak4ifhpqh15ycf01p8l3a5qas3m7lkg09y8mqimwq5hh"; + libraryHaskellDepends = [ + base hasktorch-signatures-types hasktorch-types-th + ]; + doHaddock = false; + description = "Signatures for support tensors in hasktorch"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + + "hasktorch-signatures-types" = callPackage + ({ mkDerivation, base, deepseq }: + mkDerivation { + pname = "hasktorch-signatures-types"; + version = "0.0.1.0"; + sha256 = "0zaa0ihgbsiwqla46dixmxki75miy5dz91agvvd147rmr2khx1j2"; + libraryHaskellDepends = [ base deepseq ]; + doHaddock = false; + description = "Core types for Hasktorch backpack signatures"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "hasktorch-types-th" = callPackage + ({ mkDerivation, base, c2hs, inline-c }: + mkDerivation { + pname = "hasktorch-types-th"; + version = "0.0.1.0"; + sha256 = "0irlf1lvadnr3j3zjakvkvrwdw8gpg5smk69w9l54idwsi6yvhdd"; + libraryHaskellDepends = [ base inline-c ]; + libraryToolDepends = [ c2hs ]; + description = "C-types for Torch"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "hasktorch-types-thc" = callPackage + ({ mkDerivation, base, c2hs, hasktorch-types-th, inline-c }: + mkDerivation { + pname = "hasktorch-types-thc"; + version = "0.0.1.0"; + sha256 = "06jxjn9s34myy4v8ad42xqmkyad5qraj99a3vpcxfagjxwcn4hbd"; + libraryHaskellDepends = [ base hasktorch-types-th inline-c ]; + libraryToolDepends = [ c2hs ]; + description = "C-types for Cutorch"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "hasktorch-zoo" = callPackage + ({ mkDerivation, backprop, base, deepseq, dimensions, directory + , filepath, generic-lens, ghc-typelits-natnormalise, hashable + , hasktorch, JuicyPixels, microlens, mtl, mwc-random, primitive + , safe-exceptions, singletons, transformers, vector + }: + mkDerivation { + pname = "hasktorch-zoo"; + version = "0.0.1.0"; + sha256 = "1cpk2q1m68y7wljaki1d4a4y45hqh34ia8r6zfw0b62f9b6zihjm"; + libraryHaskellDepends = [ + backprop base deepseq dimensions directory filepath generic-lens + ghc-typelits-natnormalise hashable hasktorch JuicyPixels microlens + mtl mwc-random primitive safe-exceptions singletons transformers + vector + ]; + description = "Neural architectures in hasktorch"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "haskus-binary" = callPackage ({ mkDerivation, base, bytestring, cereal, criterion, haskus-utils , mtl, QuickCheck, tasty, tasty-quickcheck @@ -100213,8 +100905,8 @@ self: { }: mkDerivation { pname = "haskus-utils"; - version = "1.0"; - sha256 = "1pfjarir86c2sxjh8l0jc7z5acsz8slcwb7imjdxf3dsdiy8swwd"; + version = "1.1"; + sha256 = "1grbj23545b7wxxyc4rra681k9c8xg36swlql3rgcr15m61fm647"; libraryHaskellDepends = [ base containers extra file-embed haskus-utils-data haskus-utils-types haskus-utils-variant list-t mtl @@ -100233,8 +100925,8 @@ self: { }: mkDerivation { pname = "haskus-utils-data"; - version = "1.0"; - sha256 = "007ykjinkxr9kdrk7hl81zndpan60b5l51m32nlj2xv2pjm326z4"; + version = "1.1"; + sha256 = "1001apph6i956rkb6dpfhg8cgk870s44jgaaiv8ccxivkv45y7di"; libraryHaskellDepends = [ base containers extra haskus-utils-types mtl recursion-schemes transformers @@ -100247,23 +100939,26 @@ self: { ({ mkDerivation, base }: mkDerivation { pname = "haskus-utils-types"; - version = "1.0"; - sha256 = "1rxnaw53vfmi3gv8h7j6vw4y4xxnqzwaaasd6x22fm7fzc5q64vf"; + version = "1.2"; + sha256 = "0q7i2z1l55x9pgf9bd5xng0bdx4v74356gayhdxws1gfmghgf7f0"; libraryHaskellDepends = [ base ]; description = "Haskus utility modules"; license = stdenv.lib.licenses.bsd3; }) {}; "haskus-utils-variant" = callPackage - ({ mkDerivation, base, haskus-utils-data, haskus-utils-types }: + ({ mkDerivation, base, haskus-utils-data, haskus-utils-types, tasty + , tasty-quickcheck, template-haskell + }: mkDerivation { pname = "haskus-utils-variant"; - version = "1.0"; - sha256 = "1kkqngvzifxps0hhp49syh2w4an3y4s4nvp3qbh3p00h9dw3hmsn"; + version = "2.1.1"; + sha256 = "1n8hhb4lv4d9xa0s9fzj6hhj2r22jqf9jrihck5y5nr5rvribfyk"; libraryHaskellDepends = [ - base haskus-utils-data haskus-utils-types + base haskus-utils-data haskus-utils-types template-haskell ]; - description = "Haskus utility modules"; + testHaskellDepends = [ base tasty tasty-quickcheck ]; + description = "Variant and EADT"; license = stdenv.lib.licenses.bsd3; }) {}; @@ -101002,6 +101697,7 @@ self: { ]; description = "A truth table generator for classical propositional logic"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "haven" = callPackage @@ -102727,17 +103423,18 @@ self: { "heist" = callPackage ({ mkDerivation, aeson, attoparsec, base, bifunctors, blaze-builder - , blaze-html, bytestring, containers, criterion, directory - , directory-tree, dlist, filepath, hashable, HUnit, lens - , lifted-base, map-syntax, monad-control, mtl, process, QuickCheck - , random, statistics, test-framework, test-framework-hunit - , test-framework-quickcheck2, text, time, transformers - , transformers-base, unordered-containers, vector, xmlhtml + , blaze-html, bytestring, containers, criterion + , criterion-measurement, directory, directory-tree, dlist, filepath + , hashable, HUnit, lens, lifted-base, map-syntax, monad-control + , mtl, process, QuickCheck, random, statistics, test-framework + , test-framework-hunit, test-framework-quickcheck2, text, time + , transformers, transformers-base, unordered-containers, vector + , xmlhtml }: mkDerivation { pname = "heist"; - version = "1.1"; - sha256 = "15hdq3i041ph0ry6f9dn6vx2w9hzgkvi9db4p6cy6czwbp53kjbq"; + version = "1.1.0.1"; + sha256 = "1j4h9fwny4hl2m5lgsd257lvm9057fb0hmnaqjw8a9k4hyx7hmqq"; libraryHaskellDepends = [ aeson attoparsec base blaze-builder blaze-html bytestring containers directory directory-tree dlist filepath hashable @@ -102754,10 +103451,11 @@ self: { ]; benchmarkHaskellDepends = [ aeson attoparsec base blaze-builder blaze-html bytestring - containers criterion directory directory-tree dlist filepath - hashable HUnit lifted-base map-syntax monad-control mtl process - random statistics test-framework test-framework-hunit text time - transformers transformers-base unordered-containers vector xmlhtml + containers criterion criterion-measurement directory directory-tree + dlist filepath hashable HUnit lifted-base map-syntax monad-control + mtl process random statistics test-framework test-framework-hunit + text time transformers transformers-base unordered-containers + vector xmlhtml ]; description = "An Haskell template system supporting both HTML5 and XML"; license = stdenv.lib.licenses.bsd3; @@ -103330,6 +104028,7 @@ self: { ]; description = "A command-line manager for delicious kitchen recipes"; license = stdenv.lib.licenses.gpl3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hero-club-five-tenets" = callPackage @@ -103599,8 +104298,8 @@ self: { }: mkDerivation { pname = "hevm"; - version = "0.17"; - sha256 = "0xp28mm3wxyj3win37nvrjdywkrfzm4l0j441q88bd35vr25yi2k"; + version = "0.21"; + sha256 = "0h3d1b2xdd59d3rl1a9ng1hz2hr3g6n1dpak0a4namjlcfxvwwhd"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -104010,6 +104709,7 @@ self: { ]; description = "Heyting and Boolean algebras"; license = stdenv.lib.licenses.mpl20; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hfann" = callPackage @@ -104453,8 +105153,8 @@ self: { pname = "hgmp"; version = "0.1.1"; sha256 = "1hisbcpz47x2lbqf8vzwis7qw7xhvx22lv7dcyhm9vsmsh5741dr"; - revision = "2"; - editedCabalFile = "0v318nifmgqq5jg1d5q0jspfgyqp7cfnkz3ikqaz9xjg8inzl8mr"; + revision = "3"; + editedCabalFile = "0z2xbqzyrgm9apy3xl353wgwhbnc3hdb1giw2j6fyvv705fmpb62"; libraryHaskellDepends = [ base ghc-prim integer-gmp ]; testHaskellDepends = [ base QuickCheck ]; description = "Haskell interface to GMP"; @@ -106005,8 +106705,8 @@ self: { }: mkDerivation { pname = "hjugement"; - version = "2.0.0.20180903"; - sha256 = "0zvgabj0myn5ssfpj8l50z0jwcrqkfsixdhg1wq916y8ay7yi71n"; + version = "2.0.0.20181030"; + sha256 = "063d484ns520prgvb2b1szq33wx569fgbgrzvfrgpfcznra638fi"; libraryHaskellDepends = [ base containers hashable unordered-containers ]; @@ -106870,17 +107570,17 @@ self: { }) {}; "hmatrix-quadprogpp" = callPackage - ({ mkDerivation, base, hmatrix, quadprog, vector }: + ({ mkDerivation, base, hmatrix, QuadProgpp, vector }: mkDerivation { pname = "hmatrix-quadprogpp"; version = "0.4.0.0"; sha256 = "0bvgph7x5niryn4f1ah6726np2nv8xnrvqn3hbiw8f5m7314iv5l"; libraryHaskellDepends = [ base hmatrix vector ]; - librarySystemDepends = [ quadprog ]; + librarySystemDepends = [ QuadProgpp ]; description = "Bindings to the QuadProg++ quadratic programming library"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; - }) {quadprog = null;}; + }) {inherit (pkgs) QuadProgpp;}; "hmatrix-repa" = callPackage ({ mkDerivation, base, hmatrix, repa, vector }: @@ -107470,8 +108170,8 @@ self: { }: mkDerivation { pname = "hoauth2"; - version = "1.7.2"; - sha256 = "0klkgr11p8m03ksrad59pqs0czp6hrgmzxynng4zirbmz643plvf"; + version = "1.8.1"; + sha256 = "1b2rjqd8q0ybx26pmmsb1am9v6pnbp0xb3fzqvivxppdr5z6kl29"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -108470,17 +109170,14 @@ self: { }) {}; "hopenssl" = callPackage - ({ mkDerivation, base, bytestring, Cabal, cabal-doctest, doctest - , HUnit, openssl - }: + ({ mkDerivation, base, bytestring, HUnit, openssl }: mkDerivation { pname = "hopenssl"; - version = "2.2.1"; - sha256 = "1pxbs1k8sizvvz1nn1zv2i5grn0w11s9g09z07w5f80kbz0slcbh"; - setupHaskellDepends = [ base Cabal cabal-doctest ]; + version = "2.2.2"; + sha256 = "0k589mi4sny88jaqxcqd0jgy6kmbzslxk6y1bk8xkvq73nvjxnjl"; libraryHaskellDepends = [ base bytestring ]; librarySystemDepends = [ openssl ]; - testHaskellDepends = [ base doctest HUnit ]; + testHaskellDepends = [ base HUnit ]; description = "FFI Bindings to OpenSSL's EVP Digest Interface"; license = stdenv.lib.licenses.bsd3; maintainers = with stdenv.lib.maintainers; [ peti ]; @@ -109072,7 +109769,7 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "hpack_0_31_0" = callPackage + "hpack_0_31_1" = callPackage ({ mkDerivation, aeson, base, bifunctors, bytestring, Cabal , containers, cryptonite, deepseq, directory, filepath, Glob, hspec , hspec-discover, http-client, http-client-tls, http-types, HUnit @@ -109082,8 +109779,8 @@ self: { }: mkDerivation { pname = "hpack"; - version = "0.31.0"; - sha256 = "0lh60zqjzbjq0hkdia97swz0g1r3ihj84fph9jq9936fpb7hm1n9"; + version = "0.31.1"; + sha256 = "0fipbmmj4x588z7vh635mizhym9krydfxr49bgaf7xir4fsb4fmc"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -109144,26 +109841,33 @@ self: { }) {}; "hpack-dhall" = callPackage - ({ mkDerivation, aeson, base, dhall, dhall-json, hpack, hspec - , interpolate, megaparsec, mockery, text, transformers + ({ mkDerivation, aeson, aeson-pretty, base, bytestring, Cabal + , dhall, dhall-json, Diff, directory, filepath, hpack, megaparsec + , microlens, optparse-applicative, prettyprinter, tasty + , tasty-golden, text, transformers, utf8-string, yaml }: mkDerivation { pname = "hpack-dhall"; - version = "0.3.0"; - sha256 = "0dplb37npz47cxya1c3dnj6bjcnprjph83yifb08a5qf6vnhcjyh"; - revision = "3"; - editedCabalFile = "1paz90nmir7hrwp9yf2aair14gyiw8ql7f9vj2ry8r7q00xbpfv2"; - isLibrary = false; + version = "0.5.0"; + sha256 = "0nqvcs9ch2knlllb0r0j0aqwab7h3yxh5iay377gyq8xc0m4l8w6"; + isLibrary = true; isExecutable = true; + libraryHaskellDepends = [ + aeson aeson-pretty base bytestring dhall dhall-json filepath hpack + megaparsec microlens prettyprinter text transformers yaml + ]; executableHaskellDepends = [ - aeson base dhall dhall-json hpack megaparsec text transformers + aeson aeson-pretty base bytestring dhall dhall-json filepath hpack + megaparsec microlens optparse-applicative prettyprinter text + transformers yaml ]; testHaskellDepends = [ - aeson base dhall dhall-json hpack hspec interpolate megaparsec - mockery text transformers + aeson aeson-pretty base bytestring Cabal dhall dhall-json Diff + directory filepath hpack megaparsec microlens prettyprinter tasty + tasty-golden text transformers utf8-string yaml ]; - description = "Dhall support for Hpack"; - license = stdenv.lib.licenses.publicDomain; + description = "hpack's dhalling"; + license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; }) {}; @@ -110636,8 +111340,8 @@ self: { }: mkDerivation { pname = "hs2ats"; - version = "0.3.0.4"; - sha256 = "1mqm4yblv22368v01xq59ppi4ifjpqlswfirm6n42ckb47xhmy09"; + version = "0.5.0.0"; + sha256 = "0ga90mkz11iis5knd51dqpqd4qyj6fwl15nbdbwzlynpk0wsdsga"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -110716,6 +111420,18 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "hsPID" = callPackage + ({ mkDerivation, base, HUnit, lens }: + mkDerivation { + pname = "hsPID"; + version = "0.1"; + sha256 = "16ks8pvpd0rcw11zinzlldv21i6mbcbrnnq3j9z3vmcjpd25wzim"; + libraryHaskellDepends = [ base lens ]; + testHaskellDepends = [ base HUnit lens ]; + description = "PID control loop"; + license = stdenv.lib.licenses.lgpl3; + }) {}; + "hsSqlite3" = callPackage ({ mkDerivation, base, bindings-sqlite3, bytestring, mtl , utf8-string @@ -110944,6 +111660,7 @@ self: { testHaskellDepends = [ base tasty tasty-hspec ]; description = "A preprocessor that helps with writing Haskell bindings to C code"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "hsc3" = callPackage @@ -111908,6 +112625,24 @@ self: { license = stdenv.lib.licenses.isc; }) {}; + "hsinstall_2_1" = callPackage + ({ mkDerivation, base, Cabal, directory, filepath, heredoc, process + }: + mkDerivation { + pname = "hsinstall"; + version = "2.1"; + sha256 = "1azbzkslszq9pw4h91mp1zr6g6ad2haaf3g5146naf1f456z9zjg"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base directory filepath ]; + executableHaskellDepends = [ + base Cabal directory filepath heredoc process + ]; + description = "Install Haskell software"; + license = stdenv.lib.licenses.isc; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "hskeleton" = callPackage ({ mkDerivation, base, Cabal }: mkDerivation { @@ -112556,14 +113291,14 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "hspec_2_5_8" = callPackage + "hspec_2_6_0" = callPackage ({ mkDerivation, base, hspec-core, hspec-discover , hspec-expectations, QuickCheck }: mkDerivation { pname = "hspec"; - version = "2.5.8"; - sha256 = "061k4r1jlzcnl0mzvk5nvamw1bx36rs2a38958m2hlh2mmfnfnsr"; + version = "2.6.0"; + sha256 = "0qwla0bff2q52v27rxjgcp8g3yw0r2iyggp8ggmmabxkk983db6i"; libraryHaskellDepends = [ base hspec-core hspec-discover hspec-expectations QuickCheck ]; @@ -112614,6 +113349,21 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "hspec-contrib_0_5_1" = callPackage + ({ mkDerivation, base, hspec, hspec-core, HUnit, QuickCheck }: + mkDerivation { + pname = "hspec-contrib"; + version = "0.5.1"; + sha256 = "0hhzxaa3fxz5mk5qcsrnfr98a7bn3szx2ydgr0x9mbqmm1jg06rc"; + revision = "1"; + editedCabalFile = "0vjmyrsb878914b4khwdy3fcn9n217q8k5xnszlrp7dl1jnbqyi4"; + libraryHaskellDepends = [ base hspec-core HUnit ]; + testHaskellDepends = [ base hspec hspec-core HUnit QuickCheck ]; + description = "Contributed functionality for Hspec"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "hspec-core_2_4_8" = callPackage ({ mkDerivation, ansi-terminal, array, base, call-stack, deepseq , directory, filepath, hspec-expectations, hspec-meta, HUnit @@ -112671,7 +113421,7 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "hspec-core_2_5_8" = callPackage + "hspec-core_2_6_0" = callPackage ({ mkDerivation, ansi-terminal, array, base, call-stack, clock , deepseq, directory, filepath, hspec-expectations, hspec-meta , HUnit, process, QuickCheck, quickcheck-io, random, setenv @@ -112679,8 +113429,8 @@ self: { }: mkDerivation { pname = "hspec-core"; - version = "2.5.8"; - sha256 = "08y6rhzc2vwmrxzl3bc8iwklkhgzv7x90mf9fnjnddlyaj7wcjg5"; + version = "2.6.0"; + sha256 = "0f3fb6cgfp0yywxi9ii2vzmkrj669nprphcs1piad7bacsk12y6r"; libraryHaskellDepends = [ ansi-terminal array base call-stack clock deepseq directory filepath hspec-expectations HUnit QuickCheck quickcheck-io random @@ -112755,13 +113505,13 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "hspec-discover_2_5_8" = callPackage + "hspec-discover_2_6_0" = callPackage ({ mkDerivation, base, directory, filepath, hspec-meta, QuickCheck }: mkDerivation { pname = "hspec-discover"; - version = "2.5.8"; - sha256 = "001i0ldxi88qcww2hh3mkdr6svw4kj23lf65camk9bgn5zwvq5aj"; + version = "2.6.0"; + sha256 = "17q5g5z7pylw8ghx1jbwk5qrafcg2cblpckvkwla1y3dzry43nc2"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base directory filepath ]; @@ -113723,6 +114473,29 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {seccomp = null;}; + "hssh" = callPackage + ({ mkDerivation, async, base, bytestring, cereal, containers + , cryptonite, data-default, memory, stm, tasty, tasty-hunit + , tasty-quickcheck + }: + mkDerivation { + pname = "hssh"; + version = "0.1.0.0"; + sha256 = "00g87418fhzcxf1xmrj9s40g6i1cgjx65ki027sqgkss49w1w6ig"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + async base bytestring cereal containers cryptonite data-default + memory stm + ]; + testHaskellDepends = [ + async base bytestring cereal containers cryptonite data-default + memory stm tasty tasty-hunit tasty-quickcheck + ]; + description = "SSH protocol implementation"; + license = stdenv.lib.licenses.mit; + }) {}; + "hsshellscript" = callPackage ({ mkDerivation, base, c2hs, directory, parsec, random, unix }: mkDerivation { @@ -115002,6 +115775,26 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "http-client-openssl_0_3_0_0" = callPackage + ({ mkDerivation, base, bytestring, HsOpenSSL, hspec, http-client + , http-types, network + }: + mkDerivation { + pname = "http-client-openssl"; + version = "0.3.0.0"; + sha256 = "0y7d1bp045mj1lnbd74a1v4viv5g5awivdhbycq75hnvqf2n50vl"; + libraryHaskellDepends = [ + base bytestring HsOpenSSL http-client network + ]; + testHaskellDepends = [ + base HsOpenSSL hspec http-client http-types + ]; + doCheck = false; + description = "http-client backend using the OpenSSL library"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "http-client-request-modifiers" = callPackage ({ mkDerivation, base, bytestring, exceptions, http-client , http-media, http-types, network, network-uri @@ -115738,29 +116531,29 @@ self: { "http2" = callPackage ({ mkDerivation, aeson, aeson-pretty, array, base, bytestring - , bytestring-builder, case-insensitive, containers, criterion - , directory, doctest, filepath, Glob, hashtables, heaps, hex, hspec - , mwc-random, psqueues, stm, text, unordered-containers, vector - , word8 + , case-insensitive, containers, criterion, directory, doctest + , filepath, Glob, heaps, hex, hspec, mwc-random, network-byte-order + , psqueues, stm, text, unordered-containers, vector, word8 }: mkDerivation { pname = "http2"; - version = "1.6.3"; - sha256 = "0hww0rfsv6lqx62qzycbcqy5q6rh9k09qkyjkdm5m1sp1z50wqk1"; + version = "1.6.4"; + sha256 = "0rhy7z67bmbb15kxq9fmpgvqmc3npsbf1ym04cg07ymq9ihxvjig"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - array base bytestring bytestring-builder case-insensitive - containers psqueues stm + array base bytestring case-insensitive containers + network-byte-order psqueues stm ]; testHaskellDepends = [ - aeson aeson-pretty array base bytestring bytestring-builder - case-insensitive containers directory doctest filepath Glob hex - hspec psqueues stm text unordered-containers vector word8 + aeson aeson-pretty array base bytestring case-insensitive + containers directory doctest filepath Glob hex hspec + network-byte-order psqueues stm text unordered-containers vector + word8 ]; benchmarkHaskellDepends = [ - array base bytestring case-insensitive containers criterion - hashtables heaps mwc-random psqueues stm + array base bytestring case-insensitive containers criterion heaps + mwc-random network-byte-order psqueues stm ]; description = "HTTP/2 library including frames, priority queues and HPACK"; license = stdenv.lib.licenses.bsd3; @@ -115772,10 +116565,8 @@ self: { }: mkDerivation { pname = "http2-client"; - version = "0.8.0.1"; - sha256 = "055x0cscrd0idfda4ak48dagkmqkgj1zg29mz4yxrdj9vp2n0xd3"; - revision = "1"; - editedCabalFile = "190dhnj34b9xnpf6d3lj5a1fr90k2dy1l1i8505mp49lxzdvzkgc"; + version = "0.8.0.2"; + sha256 = "16m4amw7xq7psvxix76z7g1dvllkfs9pzpnig5rfhbgfvbf5pydw"; libraryHaskellDepends = [ async base bytestring containers deepseq http2 network stm time tls ]; @@ -115790,8 +116581,8 @@ self: { }: mkDerivation { pname = "http2-client-exe"; - version = "0.1.0.0"; - sha256 = "0i8rnq01dlnj7yzf64b7g7cshzsbxc668m9fhc97x3hbdr7b0iad"; + version = "0.1.0.1"; + sha256 = "1z1y52253dybliwplybwd71a1ssmma34zcylv54aj6x7grrj37hm"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -116801,14 +117592,14 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "hw-ip_0_4_1" = callPackage + "hw-ip_0_4_2" = callPackage ({ mkDerivation, attoparsec, base, generic-lens, hedgehog, hspec , hw-bits, hw-hspec-hedgehog, text }: mkDerivation { pname = "hw-ip"; - version = "0.4.1"; - sha256 = "0kql3qvav2r0fsppiqa40s95938gfzkal5bkli3rhjiknj3vhbg7"; + version = "0.4.2"; + sha256 = "1jcfj75hlg7szvknw6v13barvcilldzh76jv1rnfyscrfhpdkd2s"; libraryHaskellDepends = [ attoparsec base generic-lens hw-bits text ]; @@ -117059,8 +117850,8 @@ self: { }: mkDerivation { pname = "hw-prim"; - version = "0.6.2.17"; - sha256 = "184ymryvfj3s6bc3igahfyd8k9cqf59vmpb9g3afh8xpicpmmiv6"; + version = "0.6.2.18"; + sha256 = "1sm6rji0vv3ddi4sjp1q8nz271a084xpnv86n0adqzvd7b7sihip"; libraryHaskellDepends = [ base bytestring mmap semigroups transformers vector ]; @@ -117216,6 +118007,32 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "hw-streams" = callPackage + ({ mkDerivation, base, bytestring, criterion, directory, exceptions + , ghc-prim, hedgehog, hspec, hw-bits, hw-hspec-hedgehog, hw-prim + , mmap, primitive, QuickCheck, semigroups, transformers, vector + }: + mkDerivation { + pname = "hw-streams"; + version = "0.0.0.6"; + sha256 = "1pfzg1xq39x1mw91nkmswc3sprjh58cygblsqi69x7msgfjdl116"; + libraryHaskellDepends = [ + base bytestring ghc-prim hw-bits hw-prim mmap primitive semigroups + transformers vector + ]; + testHaskellDepends = [ + base bytestring directory exceptions ghc-prim hedgehog hspec + hw-bits hw-hspec-hedgehog hw-prim mmap primitive QuickCheck + semigroups transformers vector + ]; + benchmarkHaskellDepends = [ + base bytestring criterion ghc-prim hw-bits hw-prim mmap primitive + semigroups transformers vector + ]; + description = "Primitive functions and data types"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "hw-string-parse" = callPackage ({ mkDerivation, base, bytestring, hspec, QuickCheck, vector }: mkDerivation { @@ -118992,8 +119809,8 @@ self: { }: mkDerivation { pname = "idris"; - version = "1.3.0"; - sha256 = "1w5i2z88li4niykwc6yrgxgfp25ll6ih95cip0ri7d8i7ik03c48"; + version = "1.3.1"; + sha256 = "0fn9h58l592j72njwma1ia48h8h87wi2rjqfxs7j2lfmvgfv18fi"; configureFlags = [ "-fcurses" "-fexeconly" "-fffi" "-fgmp" ]; isLibrary = true; isExecutable = true; @@ -120855,6 +121672,17 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "initialize" = callPackage + ({ mkDerivation, base }: + mkDerivation { + pname = "initialize"; + version = "0.1.1.0"; + sha256 = "0k3bl5adj512bzqysapnggvf6fmi0hs3mvxkymsh9af7gan8y504"; + libraryHaskellDepends = [ base ]; + description = "Initialization and Deinitialization of 'Storable' values"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "inj" = callPackage ({ mkDerivation }: mkDerivation { @@ -120980,8 +121808,8 @@ self: { }: mkDerivation { pname = "inline-c-cpp"; - version = "0.2.2.1"; - sha256 = "1rk7fmpkmxw9hhwr8df29kadnf0ybnwj64ggdbnsdrpfyhnkisci"; + version = "0.3.0.1"; + sha256 = "00q4f2rv6ny5cnfyfdwqvmngw2w40jfs5zb1x7zs574w4l31g701"; libraryHaskellDepends = [ base inline-c safe-exceptions template-haskell ]; @@ -121627,8 +122455,8 @@ self: { }: mkDerivation { pname = "intero"; - version = "0.1.32"; - sha256 = "0xk693yhq2hkilznjzsszamvg7pg1l0qyb2y17ffr2s966i4pfr0"; + version = "0.1.34"; + sha256 = "02yq6rxg50za2lcsf6hvld5f1ab4q91kmw74j6kngm7921fa8fi3"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -121892,15 +122720,15 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "intro_0_5_1_0" = callPackage + "intro_0_5_2_1" = callPackage ({ mkDerivation, base, bytestring, containers, deepseq, dlist , extra, hashable, lens, mtl, QuickCheck, safe, text, transformers , unordered-containers, writer-cps-mtl }: mkDerivation { pname = "intro"; - version = "0.5.1.0"; - sha256 = "0gsj5l0vgvpbdw2vwlr9r869jwc08lqbypp24g33dlnd338pjxzs"; + version = "0.5.2.1"; + sha256 = "0i5cpa5jx82nb1gi1wdhgnbmxlb7s4nbya46k6byajf7g50i5qp8"; libraryHaskellDepends = [ base bytestring containers deepseq dlist extra hashable mtl safe text transformers unordered-containers writer-cps-mtl @@ -122014,6 +122842,8 @@ self: { pname = "invariant"; version = "0.5.1"; sha256 = "0aqj7z55632qdg45074kgn9qfdxzb0a2f8lgjzr0l0i4mm2rr37b"; + revision = "1"; + editedCabalFile = "100gsacbpal53khj94m5qs4aq70hbsp4dz4065czfm49ysd4yqq4"; libraryHaskellDepends = [ array base bifunctors comonad containers contravariant ghc-prim profunctors semigroups StateVar stm tagged template-haskell @@ -124147,8 +124977,8 @@ self: { ({ mkDerivation, alex, array, base, happy, pretty }: mkDerivation { pname = "java-adt"; - version = "0.2016.11.28"; - sha256 = "1p4j42nzsbd2dsag2gfnngvbdn5vx9cp8lmli6x05sdywabyckc7"; + version = "0.2018.11.4"; + sha256 = "1pdp7yvq0gpbxw7gp61r5mkrhdiff0cvlxssxzvg770idp46j6p5"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -124566,6 +125396,18 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "jmonkey" = callPackage + ({ mkDerivation, base, casing, free, jmacro }: + mkDerivation { + pname = "jmonkey"; + version = "0.1.0.1"; + sha256 = "1yhmhaa8ykjv3xivd7v10q3zw3pvgf45jk5wsbrr95s2p806n5nf"; + libraryHaskellDepends = [ base casing free jmacro ]; + testHaskellDepends = [ base casing free jmacro ]; + description = "Jmonkey is very restricted but handy EDSL for JavaScript"; + license = stdenv.lib.licenses.mit; + }) {}; + "jni" = callPackage ({ mkDerivation, base, bytestring, choice, constraints, containers , cpphs, deepseq, inline-c, jdk, singletons @@ -125477,8 +126319,8 @@ self: { pname = "json-rpc-client"; version = "0.2.5.0"; sha256 = "177lrw5m9dxdk6mcay0f92rwyih8q7znwb8m6da6r3zsn30gajak"; - revision = "8"; - editedCabalFile = "04dqdn9gdw5xgkm4cnzsph57xcjc01rm1fdfwcfdzg71mbyf8f7y"; + revision = "9"; + editedCabalFile = "04b65m8lhk2g2d5x5i637ff3wkgvf4z6dhn5x1pizsj9y3aq35zm"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -125523,8 +126365,8 @@ self: { pname = "json-rpc-server"; version = "0.2.6.0"; sha256 = "1xfcxbwri9a5p3xxbc4kvr1kqdnm4c1axd8kgb8dglabffbrk7hn"; - revision = "5"; - editedCabalFile = "0hvkfbgg3jbgs0d2jp5djhpd2qp3q9hs5cr4ds93bc9nyncymyq9"; + revision = "6"; + editedCabalFile = "1rfabr679pk605v141gm0ynbp3l6x87s3ip3wa49lwnpab495mxs"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -125571,8 +126413,8 @@ self: { pname = "json-sop"; version = "0.2.0.3"; sha256 = "0ay2cymy4aar23cixcyqam91bs9x4z0vqiw2k0nvgy9nyqfz2r9h"; - revision = "1"; - editedCabalFile = "1bvmfl6fqdr8fklv8zai5jgzlnv1jf9xy8i656lfz1ys95q9yr48"; + revision = "2"; + editedCabalFile = "1lclvvcfvicr05v2nf1xkf21qry2g2bqjhd7gfhza89d571aq3gp"; libraryHaskellDepends = [ aeson base generics-sop lens-sop tagged text time transformers unordered-containers vector @@ -127791,6 +128633,30 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "kind-apply" = callPackage + ({ mkDerivation, base }: + mkDerivation { + pname = "kind-apply"; + version = "0.1.0.0"; + sha256 = "0n2picf38cxfgsi76372h6d25s5kvc32qw7514b2i4ald6qh8aip"; + libraryHaskellDepends = [ base ]; + description = "Utilities to work with lists of types"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + + "kind-generics" = callPackage + ({ mkDerivation, base, kind-apply }: + mkDerivation { + pname = "kind-generics"; + version = "0.1.0.0"; + sha256 = "1h6pb14b75lphlxzz7q08ihvg2phh082sx6a2zpdk5gwh8qzihpg"; + libraryHaskellDepends = [ base kind-apply ]; + description = "Generic programming in GHC style for arbitrary kinds and GADTs"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "kinds" = callPackage ({ mkDerivation, base }: mkDerivation { @@ -128657,8 +129523,8 @@ self: { }: mkDerivation { pname = "lambdabot"; - version = "5.1.0.2"; - sha256 = "1nzjlxyzrri8zw67flqn1arz10mgbmyglhvf6pg4r8w78iwg5nk3"; + version = "5.1.0.4"; + sha256 = "1pywangzqf85pqhh5sn10vpk0wrd7ff5p29jrsi6sxdz5lyb7svk"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; @@ -128682,8 +129548,8 @@ self: { }: mkDerivation { pname = "lambdabot-core"; - version = "5.1.0.2"; - sha256 = "1n0cqkbiadc169vq7pj5zwvi3yay6db60q8pdk4kci0s9clz4161"; + version = "5.1.0.4"; + sha256 = "1cnp0w47fp0s1zlyb0d90xj5ynwfmlnzm5inc5lhbichwgqcwfzk"; libraryHaskellDepends = [ base binary bytestring containers dependent-map dependent-sum dependent-sum-template directory edit-distance filepath haskeline @@ -128708,8 +129574,8 @@ self: { }: mkDerivation { pname = "lambdabot-haskell-plugins"; - version = "5.1.0.3"; - sha256 = "1hka7kb2j5nqzv9jljjyylfyrf5z3hsfp2sfgv95y5qsr2b6g96a"; + version = "5.1.0.4"; + sha256 = "19fl14c1j7p9qaf26g1qkmxvmw9r7hvxqmp9jxmmwbp7xlc3664v"; libraryHaskellDepends = [ array arrows base bytestring containers data-memocombinators directory filepath haskell-src-exts-simple hoogle HTTP IOSpec @@ -128729,8 +129595,8 @@ self: { }: mkDerivation { pname = "lambdabot-irc-plugins"; - version = "5.1.0.1"; - sha256 = "1axixb6q5j7vs93q9d3n5v7l57nvnbjpry1ww8vaqlm71m1z4l2f"; + version = "5.1.0.4"; + sha256 = "0kscksdqjysk9amxwb1xjh475pbwq22mf9as5kqwn72c8s75ngaf"; libraryHaskellDepends = [ base bytestring containers directory filepath lambdabot-core lifted-base mtl network SafeSemaphore split time @@ -128749,8 +129615,8 @@ self: { }: mkDerivation { pname = "lambdabot-misc-plugins"; - version = "5.1.0.1"; - sha256 = "1bg15z7k21l0dwnkvprxvx5jcvs5igl8fqffg11y7h0r74f4yhks"; + version = "5.1.0.4"; + sha256 = "169grwgg5x63qhls16c7xd0p78da38r275mar27il78az7qfgn8d"; libraryHaskellDepends = [ base bytestring containers filepath hstatsd lambdabot-core lifted-base mtl network network-uri parsec process random random-fu @@ -128769,8 +129635,8 @@ self: { }: mkDerivation { pname = "lambdabot-novelty-plugins"; - version = "5.1.0.1"; - sha256 = "1ispnp12i2f8fcs11nay3mww8sa6dwx7lkl6d6gc9cfhzgwih6gi"; + version = "5.1.0.4"; + sha256 = "1m6n0asp8pn12wif5jv0nvjipzgh7mzzxa17j4mzd7mdqi4dma7z"; libraryHaskellDepends = [ base binary brainfuck bytestring containers dice directory lambdabot-core misfortune process random-fu regex-tdfa unlambda @@ -128786,8 +129652,8 @@ self: { }: mkDerivation { pname = "lambdabot-reference-plugins"; - version = "5.1.0.1"; - sha256 = "0s5923hsl1pzyayi4954livp4rsgx84slwpnr7mq8nhfsdxm84wp"; + version = "5.1.0.4"; + sha256 = "0qavp784p5qdb2plhhgk1idrjxcazzn4a94pg8syymb24fzjvm1w"; libraryHaskellDepends = [ base bytestring containers HTTP lambdabot-core mtl network network-uri oeis process regex-tdfa split tagsoup utf8-string @@ -128802,8 +129668,8 @@ self: { }: mkDerivation { pname = "lambdabot-social-plugins"; - version = "5.1.0.1"; - sha256 = "1p46qyb2x7h37xs9y69k1mc5v84rwvkrgkdwkl4cw6pmnkmjnl42"; + version = "5.1.0.4"; + sha256 = "0kjjsnrrsrcdvkn75dsbw7afx8y87i36i6lk54hs6cg88zndailz"; libraryHaskellDepends = [ base binary bytestring containers lambdabot-core mtl split time ]; @@ -128815,8 +129681,8 @@ self: { ({ mkDerivation, base, oeis, QuickCheck, QuickCheck-safe }: mkDerivation { pname = "lambdabot-trusted"; - version = "5.1.0.1"; - sha256 = "11qvpxgv4xbs8iw0lix8mdj174dzj0gwgny7vgvs4vd9pi37sb7r"; + version = "5.1.0.4"; + sha256 = "1mlyhxc93d3466xhxqlyzg1c8988spzbyk4d5l0c05l1m0xlq77j"; libraryHaskellDepends = [ base oeis QuickCheck QuickCheck-safe ]; description = "Lambdabot trusted code"; license = "GPL"; @@ -129355,6 +130221,8 @@ self: { pname = "language-c-quote"; version = "0.12.2"; sha256 = "15c6rdj91768jf8lqzf4fkbi8k6kz9gch5w81x6qzy2l256rncgb"; + revision = "1"; + editedCabalFile = "099w1lln1vm000sf06wrmq6gya5sx2w4flrlwqz2c8wwvv8c9j9h"; libraryHaskellDepends = [ array base bytestring containers exception-mtl exception-transformers filepath haskell-src-meta mainland-pretty @@ -129453,15 +130321,15 @@ self: { license = stdenv.lib.licenses.gpl3; }) {}; - "language-docker_7_0_0" = callPackage + "language-docker_8_0_0" = callPackage ({ mkDerivation, base, bytestring, containers, directory, filepath , free, Glob, hspec, HUnit, megaparsec, mtl, prettyprinter, process , QuickCheck, split, template-haskell, text, th-lift, time }: mkDerivation { pname = "language-docker"; - version = "7.0.0"; - sha256 = "0c63la3739fbcf50vy1cp245fk7x723gviyykd3dmggm1jwgm515"; + version = "8.0.0"; + sha256 = "00zryknsc0717ysq8g1ip5dm70v8b33lfrscbzpdcw5dd2j32k7n"; libraryHaskellDepends = [ base bytestring containers free megaparsec mtl prettyprinter split template-haskell text th-lift time @@ -129583,13 +130451,18 @@ self: { }) {}; "language-elm" = callPackage - ({ mkDerivation, base, hspec, MissingH, mtl, pretty, protolude }: + ({ mkDerivation, base, doctest, hspec, MissingH, mtl, pretty + , protolude + }: mkDerivation { pname = "language-elm"; - version = "0.1.0.3"; - sha256 = "07pyj3ibrpa3mrqn6skjpk0w44hi32mm0c08yqpnql3qv2xy4wcz"; + version = "0.1.1.3"; + sha256 = "11g8jf7pbkb6gjwxjrwnk6hx38hjfymm421qnqd41cm0w2xmxbhh"; + enableSeparateDataOutput = true; libraryHaskellDepends = [ base MissingH mtl pretty protolude ]; - testHaskellDepends = [ base hspec mtl pretty protolude ]; + libraryToolDepends = [ doctest ]; + testHaskellDepends = [ base doctest hspec mtl pretty protolude ]; + testToolDepends = [ doctest ]; description = "Generate elm code"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; @@ -130091,45 +130964,44 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; - "language-puppet_1_4_0" = callPackage - ({ mkDerivation, aeson, ansi-wl-pprint, attoparsec, base + "language-puppet_1_4_1" = callPackage + ({ mkDerivation, aeson, ansi-wl-pprint, async, attoparsec, base , base16-bytestring, bytestring, case-insensitive, containers - , cryptonite, directory, exceptions, filecache, filepath - , formatting, Glob, hashable, hruby, hslogger, hspec - , hspec-megaparsec, http-api-data, http-client, lens, lens-aeson - , megaparsec, memory, mtl, operational, optparse-applicative - , parallel-io, parsec, parser-combinators, pcre-utils, process - , protolude, random, regex-pcre-builtin, scientific, servant - , servant-client, split, stm, strict-base-types, temporary, text - , time, transformers, unix, unordered-containers, vector, yaml + , cryptonite, directory, filecache, filepath, formatting, Glob + , hashable, hruby, hslogger, hspec, hspec-megaparsec, http-api-data + , http-client, lens, lens-aeson, megaparsec, memory, mtl + , operational, optparse-applicative, parsec, parser-combinators + , pcre-utils, protolude, random, regex-pcre-builtin, scientific + , servant, servant-client, split, stm, strict-base-types, temporary + , text, time, transformers, unix, unordered-containers, vector + , yaml }: mkDerivation { pname = "language-puppet"; - version = "1.4.0"; - sha256 = "169kzd6csar170j0zqzisa82jxs5xfang17ys6aa4m1jx0nbh4mz"; + version = "1.4.1"; + sha256 = "1az4lalx2qb9wf0n99zjd9agy20x8369f80411mhj11rcnnl1a66"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; libraryHaskellDepends = [ aeson ansi-wl-pprint attoparsec base base16-bytestring bytestring - case-insensitive containers cryptonite directory exceptions - filecache filepath formatting hashable hruby hslogger hspec - http-api-data http-client lens lens-aeson megaparsec memory mtl - operational parsec parser-combinators pcre-utils process protolude - random regex-pcre-builtin scientific servant servant-client split - stm strict-base-types text time transformers unix - unordered-containers vector yaml + case-insensitive containers cryptonite directory filecache filepath + formatting hashable hruby hslogger http-api-data http-client lens + lens-aeson megaparsec memory mtl operational parsec + parser-combinators pcre-utils protolude random regex-pcre-builtin + scientific servant servant-client split stm strict-base-types text + time transformers unix unordered-containers vector yaml ]; executableHaskellDepends = [ - aeson ansi-wl-pprint base bytestring containers Glob hslogger - http-client lens megaparsec mtl optparse-applicative parallel-io - regex-pcre-builtin strict-base-types text transformers - unordered-containers vector yaml + aeson ansi-wl-pprint async base bytestring containers Glob hslogger + http-client lens mtl optparse-applicative regex-pcre-builtin + strict-base-types text transformers unordered-containers vector + yaml ]; testHaskellDepends = [ base Glob hslogger hspec hspec-megaparsec lens megaparsec mtl - pcre-utils protolude scientific strict-base-types temporary text - transformers unordered-containers vector + pcre-utils scientific strict-base-types temporary text transformers + unordered-containers vector ]; description = "Tools to parse and evaluate the Puppet DSL"; license = stdenv.lib.licenses.bsd3; @@ -131171,6 +132043,17 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "leancheck-enum-instances" = callPackage + ({ mkDerivation, base, enum-types, leancheck }: + mkDerivation { + pname = "leancheck-enum-instances"; + version = "0.1.0.0"; + sha256 = "0l14npnkwdr3vcdjv2b20a0g3cka0nd93cm6hrq16dcphm1ckaj1"; + libraryHaskellDepends = [ base enum-types leancheck ]; + description = "listable instances for small enum types"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "leankit-api" = callPackage ({ mkDerivation, aeson, base, bytestring, colour, curl, split }: mkDerivation { @@ -131801,6 +132684,8 @@ self: { pname = "lens-sop"; version = "0.2.0.2"; sha256 = "16bd95cwqiprz55s5272mv6wiw5pmv6mvihviiwbdbilhq400s3z"; + revision = "1"; + editedCabalFile = "0k7xdwj64kd56kjh7ghjwm79rjwjqxlw5nwzwj0cq5q56vb340jm"; libraryHaskellDepends = [ base fclabels generics-sop transformers ]; @@ -131862,6 +132747,18 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "lens-typelevel" = callPackage + ({ mkDerivation, base, singletons }: + mkDerivation { + pname = "lens-typelevel"; + version = "0.1.1.0"; + sha256 = "0lsdp6rgacsa13fppa2dfn2nz8cdrvj5clmlshzrv1h0423hfgbp"; + libraryHaskellDepends = [ base singletons ]; + description = "Type-level lenses using singletons"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "lens-utils" = callPackage ({ mkDerivation, aeson, base, containers, data-default, lens , monoid, split, template-haskell @@ -131924,8 +132821,8 @@ self: { }: mkDerivation { pname = "lentil"; - version = "1.0.11.3"; - sha256 = "0kb9fydcv0skp94bhvhbqggam8vrq2wv5iradxmggaf41h0ly123"; + version = "1.1.0.1"; + sha256 = "1psb3ywbzg6k0cir5bxphjqmbzd0n1l2w3skkr31px79haa4wbm7"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -132573,8 +133470,8 @@ self: { }: mkDerivation { pname = "libmpd"; - version = "0.9.0.8"; - sha256 = "0kpdj4ciwrfd6vmr60y7c276h5z2r40avs26a0x8s51rbr00lasq"; + version = "0.9.0.9"; + sha256 = "1931m23iqb4wddpdidm4ph746zpaw41kkjzmb074j7yyfpk7x1jv"; libraryHaskellDepends = [ attoparsec base bytestring containers data-default-class filepath mtl network old-locale text time utf8-string @@ -133182,6 +134079,7 @@ self: { ]; description = "STM operations lifted through monad transformer stacks"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "lifted-threads" = callPackage @@ -135055,6 +135953,8 @@ self: { pname = "llvm-hs"; version = "7.0.1"; sha256 = "1ghgmmks22ra6ivhwhy65yj9ihr51lbhwdghm52pna5f14brhlyy"; + revision = "1"; + editedCabalFile = "0nxyjcnsph4mlyxqy47m67ayd4mnpxx3agy5vx7f4v74bg4xx44a"; setupHaskellDepends = [ base Cabal containers ]; libraryHaskellDepends = [ array attoparsec base bytestring containers exceptions llvm-hs-pure @@ -136448,6 +137348,8 @@ self: { pname = "long-double"; version = "0.1"; sha256 = "072yfv1kv83k8qc9apks2czr9p6znk46bbbjmsdbcpzyb8byh64j"; + revision = "1"; + editedCabalFile = "12vmzzrxgb4yqf9axf1fildl4m0dfm3zqxk4vg6k6m5qi6haz1yn"; libraryHaskellDepends = [ base integer-gmp ]; description = "FFI bindings for C long double"; license = stdenv.lib.licenses.bsd3; @@ -136754,8 +137656,8 @@ self: { pname = "lrucaching"; version = "0.3.3"; sha256 = "192a2zap1bmxa2y48n48rmngf18fr8k0az4a230hziv3g795yzma"; - revision = "4"; - editedCabalFile = "11zfnngp3blx8c3sgy5cva1g9bp69wqz7ys23gdm905i7sjjs6a9"; + revision = "5"; + editedCabalFile = "0dfrgg60nd7l7pfjar1s1g380r4591y6ccv9fyh0n34ymhizk84y"; libraryHaskellDepends = [ base base-compat deepseq hashable psqueues vector ]; @@ -136875,8 +137777,8 @@ self: { }: mkDerivation { pname = "ltext"; - version = "0.1.2.2"; - sha256 = "12ql2p9zkib4m7hbfxzn8pxg0n9rgf35bhf1csrf48b6kzl9z28f"; + version = "0.1.3"; + sha256 = "1sd8iqcfm7qsp8rq1ckixi8lss8mwi4siqqgsybbxjg6ajs9m2x6"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -136890,8 +137792,9 @@ self: { transformers unordered-containers ]; testHaskellDepends = [ - base QuickCheck quickcheck-combinators quickcheck-instances tasty - tasty-quickcheck text + attoparsec base directory exceptions extra mtl pretty QuickCheck + quickcheck-combinators quickcheck-instances tasty tasty-quickcheck + text transformers unordered-containers ]; description = "Parameterized file evaluator"; license = stdenv.lib.licenses.bsd3; @@ -137910,8 +138813,8 @@ self: { }: mkDerivation { pname = "magic-wormhole"; - version = "0.1.0"; - sha256 = "0lkwnbr76chiakc7j51pm23q15q26l3xqglg1rj5blwybkymg29x"; + version = "0.2.1"; + sha256 = "1wdn5nykn4wqb65xdhkpy8gpz216a5wi3nngadf58c7acym60gyx"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -138204,6 +139107,8 @@ self: { pname = "mainland-pretty"; version = "0.7"; sha256 = "1xzavchbp345a63i24hs8632l3xk0c1pxqd32b2i6615cp9pnxqi"; + revision = "1"; + editedCabalFile = "1apyqnbcsbjfkqc1d6mk74pxl12130r6ijwhj555gddls9g0qdf3"; libraryHaskellDepends = [ base containers srcloc text transformers ]; @@ -140203,17 +141108,15 @@ self: { }: mkDerivation { pname = "mcm"; - version = "0.6.5.0"; - sha256 = "1vf54aziyybxyc9bwnn57pfcjmgli2hjjd2kzij8vy2g64ipip9m"; - revision = "1"; - editedCabalFile = "1anhhrl8a627y7vfvcmiwbfjiyvglwrqcim1gc6zycqidyqq22pq"; + version = "0.6.8.1"; + sha256 = "1nn6s15c6wwi7b0afzqfczdmc0ivrc8ncychmjym93lw967vjm67"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ base blaze-html bytestring containers directory filepath hostname MissingH polyparse process text unix ]; - description = "Manages the contents of files and directories"; + description = "Machine Configuration Manager"; license = stdenv.lib.licenses.gpl3; hydraPlatforms = stdenv.lib.platforms.none; }) {}; @@ -140691,7 +141594,7 @@ self: { license = stdenv.lib.licenses.bsd2; }) {}; - "megaparsec_7_0_2" = callPackage + "megaparsec_7_0_3" = callPackage ({ mkDerivation, base, bytestring, case-insensitive, containers , criterion, deepseq, hspec, hspec-expectations, mtl , parser-combinators, QuickCheck, scientific, text, transformers @@ -140699,8 +141602,8 @@ self: { }: mkDerivation { pname = "megaparsec"; - version = "7.0.2"; - sha256 = "1ny54saxiz0md50mp24gz267gmqjbl8d8b1zi74hi6bcxyhzd278"; + version = "7.0.3"; + sha256 = "1zngs6x7d1yp192pg8b0j5banq4y1vr1fwh1mxrxx0834bmqrll0"; libraryHaskellDepends = [ base bytestring case-insensitive containers deepseq mtl parser-combinators scientific text transformers @@ -141399,6 +142302,56 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "metar" = callPackage + ({ mkDerivation, base, checkers, deriving-compat, HTTP, lens + , network-uri, QuickCheck, semigroupoids, semigroups, tagsoup + , tagsoup-selection, tasty, tasty-hunit, tasty-quickcheck + , transformers + }: + mkDerivation { + pname = "metar"; + version = "0.0.2"; + sha256 = "1iaqjzy1a7hkvcni6ijkwwcsb433j3gkx9f7z8ng1yhlbcr9a556"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base deriving-compat HTTP lens network-uri semigroupoids semigroups + tagsoup tagsoup-selection transformers + ]; + executableHaskellDepends = [ base ]; + testHaskellDepends = [ + base checkers lens QuickCheck tasty tasty-hunit tasty-quickcheck + ]; + description = "Australian METAR"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + + "metar-http" = callPackage + ({ mkDerivation, base, checkers, http-types, lens, metar + , network-uri, QuickCheck, semigroupoids, semigroups, tasty + , tasty-hunit, tasty-quickcheck, text, transformers, utf8-string + , wai, warp + }: + mkDerivation { + pname = "metar-http"; + version = "0.0.1"; + sha256 = "0xpi9x1c05py659a94ldksn3z5xz9ws069gp1swam1fllg8xbxj6"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + base http-types lens metar network-uri semigroupoids semigroups + text transformers utf8-string wai warp + ]; + executableHaskellDepends = [ base ]; + testHaskellDepends = [ + base checkers lens QuickCheck tasty tasty-hunit tasty-quickcheck + ]; + description = "HTTP for METAR"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "metric" = callPackage ({ mkDerivation, base, data-default, edit-distance, hmatrix , QuickCheck, test-framework, test-framework-quickcheck2, vector @@ -141701,6 +142654,18 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "microlens_0_4_10" = callPackage + ({ mkDerivation, base }: + mkDerivation { + pname = "microlens"; + version = "0.4.10"; + sha256 = "1v277yyy4p9q57xr2lfp6qs24agglfczmcabrapxrzci3jfshmcw"; + libraryHaskellDepends = [ base ]; + description = "A tiny lens library with no dependencies. If you're writing an app, you probably want microlens-platform, not this."; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "microlens-aeson" = callPackage ({ mkDerivation, aeson, attoparsec, base, bytestring, criterion , deepseq, hashable, lens, lens-aeson, microlens, scientific, tasty @@ -141766,6 +142731,22 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "microlens-ghc_0_4_10" = callPackage + ({ mkDerivation, array, base, bytestring, containers, microlens + , transformers + }: + mkDerivation { + pname = "microlens-ghc"; + version = "0.4.10"; + sha256 = "102dbrdsdadxbbhvx8avv1wbk84767a7lkb8ckp3zxk9g7qlly33"; + libraryHaskellDepends = [ + array base bytestring containers microlens transformers + ]; + description = "microlens + array, bytestring, containers, transformers"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "microlens-mtl" = callPackage ({ mkDerivation, base, microlens, mtl, transformers , transformers-compat @@ -141797,6 +142778,23 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "microlens-platform_0_3_11" = callPackage + ({ mkDerivation, base, hashable, microlens, microlens-ghc + , microlens-mtl, microlens-th, text, unordered-containers, vector + }: + mkDerivation { + pname = "microlens-platform"; + version = "0.3.11"; + sha256 = "18950lxgmsg5ksvyyi3zs1smjmb1qf1q73a3p3g44bh21miz0xwb"; + libraryHaskellDepends = [ + base hashable microlens microlens-ghc microlens-mtl microlens-th + text unordered-containers vector + ]; + description = "Feature-complete microlens"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "microlens-th" = callPackage ({ mkDerivation, base, containers, microlens, template-haskell , th-abstraction, transformers @@ -143339,6 +144337,17 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "modular" = callPackage + ({ mkDerivation, base, ghc-typelits-knownnat }: + mkDerivation { + pname = "modular"; + version = "0.1.0.8"; + sha256 = "1igg7am4z1kfvpyp5a53rsqan5i209rp1s0z9xamqydx60ilc2s3"; + libraryHaskellDepends = [ base ghc-typelits-knownnat ]; + description = "Type-safe modular arithmetic"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "modular-arithmetic" = callPackage ({ mkDerivation, base, doctest, Glob }: mkDerivation { @@ -145329,14 +146338,20 @@ self: { }) {}; "monopati" = callPackage - ({ mkDerivation, base, directory, free, split }: + ({ mkDerivation, base, directory, free, hedgehog, split + , transformers + }: mkDerivation { pname = "monopati"; - version = "0.1.2"; - sha256 = "1bimppfh14754a8dra6cjd2ricdyry5fmm0shryf974h9l6wbrp8"; + version = "0.1.3"; + sha256 = "1g7n1m6df2c9rl99fii7x4a7z3xwv2mcvxd96gg1maji9709chqb"; libraryHaskellDepends = [ base directory free split ]; + testHaskellDepends = [ + base directory free hedgehog split transformers + ]; description = "Well-typed paths"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "montage" = callPackage @@ -145895,16 +146910,18 @@ self: { }) {inherit (pkgs) mpg123;}; "mpi-hs" = callPackage - ({ mkDerivation, base, bytestring, c2hs, criterion, monad-loops - , openmpi, store + ({ mkDerivation, base, binary, bytestring, c2hs, criterion + , monad-loops, openmpi, packman, store }: mkDerivation { pname = "mpi-hs"; - version = "0.3.0.0"; - sha256 = "1a8vlsrpvgyzq4p0qa90l4ck3v9a0pncy9bmmn6kjf6j2wa5j9qx"; + version = "0.4.1.0"; + sha256 = "0bf0ghzvakww5slvfd3fq0sa0972i6y60lg6ibby49nslfkl52wd"; isLibrary = true; isExecutable = true; - libraryHaskellDepends = [ base bytestring monad-loops store ]; + libraryHaskellDepends = [ + base binary bytestring monad-loops packman store + ]; librarySystemDepends = [ openmpi ]; libraryToolDepends = [ c2hs ]; executableHaskellDepends = [ base ]; @@ -145912,6 +146929,7 @@ self: { benchmarkHaskellDepends = [ base criterion ]; description = "MPI bindings for Haskell"; license = stdenv.lib.licenses.asl20; + hydraPlatforms = stdenv.lib.platforms.none; }) {inherit (pkgs) openmpi;}; "mpppc" = callPackage @@ -146756,6 +147774,48 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "multilinear" = callPackage + ({ mkDerivation, base, containers, criterion, deepseq, mwc-random + , primitive, statistics, vector + }: + mkDerivation { + pname = "multilinear"; + version = "0.2.3.0"; + sha256 = "0kx9a7iysihkaapgz8hwa5sn0c1z69yiagxmw0n5i1bjmslzssvb"; + libraryHaskellDepends = [ + base containers deepseq mwc-random primitive statistics vector + ]; + testHaskellDepends = [ base criterion ]; + benchmarkHaskellDepends = [ base criterion ]; + description = "Comprehensive and efficient (multi)linear algebra implementation"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "multilinear-io" = callPackage + ({ mkDerivation, aeson, base, bytestring, cassava, cereal + , cereal-vector, conduit, criterion, deepseq, directory, either + , multilinear, transformers, vector, zlib + }: + mkDerivation { + pname = "multilinear-io"; + version = "0.2.3"; + sha256 = "1ymlx7pg0w33a703mqdr4rd93f828xp6ygs4az1y9j0miwax9y97"; + revision = "1"; + editedCabalFile = "0xpf219r7n7hqh7b37mr9scy965mxfh9j871ayaab1mb0s7rglw9"; + libraryHaskellDepends = [ + aeson base bytestring cassava cereal cereal-vector conduit either + multilinear transformers vector zlib + ]; + testHaskellDepends = [ + base directory either multilinear transformers + ]; + benchmarkHaskellDepends = [ + base criterion deepseq directory either multilinear transformers + ]; + description = "Input/output capability for multilinear package"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "multimap" = callPackage ({ mkDerivation, base, containers }: mkDerivation { @@ -146972,10 +148032,8 @@ self: { ({ mkDerivation, base, containers, deepseq, doctest, Glob }: mkDerivation { pname = "multiset"; - version = "0.3.4"; - sha256 = "0kdmf0ba946pxq1m8q0x5bk2my2fd5frhaw3cj2i3x88nc9f0ycp"; - revision = "1"; - editedCabalFile = "0m7xk2217a5zpwb1hwp5j5r6yzlf0f4lmlnln2lb9bqihjl3j9x8"; + version = "0.3.4.1"; + sha256 = "05iynv54mgfwil7l81ni8mrhhb5vz3fdls13vm2m3dnwqgp7vzxh"; libraryHaskellDepends = [ base containers deepseq ]; testHaskellDepends = [ base doctest Glob ]; description = "The Data.MultiSet container type"; @@ -148100,6 +149158,30 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "mysql-haskell_0_8_4_1" = callPackage + ({ mkDerivation, base, binary, binary-ieee754, binary-parsers + , blaze-textual, bytestring, bytestring-lexing, cryptonite + , io-streams, memory, monad-loops, network, scientific, tasty + , tasty-hunit, tcp-streams, text, time, tls, vector, wire-streams + , word24 + }: + mkDerivation { + pname = "mysql-haskell"; + version = "0.8.4.1"; + sha256 = "0m3kqm5ldy47gv0gbh3sxv2zm4kmszw96r5sar5bzb3v9jvmz94x"; + libraryHaskellDepends = [ + base binary binary-ieee754 binary-parsers blaze-textual bytestring + bytestring-lexing cryptonite io-streams memory monad-loops network + scientific tcp-streams text time tls vector wire-streams word24 + ]; + testHaskellDepends = [ + base bytestring io-streams tasty tasty-hunit text time vector + ]; + description = "pure haskell MySQL driver"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "mysql-haskell-nem" = callPackage ({ mkDerivation, base, bytestring, io-streams, mysql-haskell , scientific, text, time @@ -148277,6 +149359,68 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "n2o" = callPackage + ({ mkDerivation, base, binary, bytestring, containers, hspec, text + }: + mkDerivation { + pname = "n2o"; + version = "0.11.1"; + sha256 = "0yvgis2v2jgdny50py8xmc9b1p2zi5kjgf45xsgsyyhzjyr30kb7"; + libraryHaskellDepends = [ base binary bytestring containers text ]; + testHaskellDepends = [ base hspec ]; + description = "Abstract Protocol Loop"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "n2o-nitro" = callPackage + ({ mkDerivation, base, base64-bytestring, binary, bytestring + , containers, n2o, text + }: + mkDerivation { + pname = "n2o-nitro"; + version = "0.11.2"; + sha256 = "1vh0r03h0k60z4q722pw4h5q0l7l56fmyp57im0nankci8vj0s38"; + libraryHaskellDepends = [ + base base64-bytestring binary bytestring containers n2o text + ]; + description = "Nitro Elements, Events and Actions"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "n2o-protocols" = callPackage + ({ mkDerivation, base, base64-bytestring, binary, bytestring + , containers, n2o, n2o-nitro, time + }: + mkDerivation { + pname = "n2o-protocols"; + version = "0.11.2"; + sha256 = "1w5r99k9wvhbwvx0hzgpn1aahhnb84ib0n7xgq1ybpgy3s9cggzk"; + libraryHaskellDepends = [ + base base64-bytestring binary bytestring containers n2o n2o-nitro + time + ]; + description = "N2O Protocols Starter Pack"; + license = stdenv.lib.licenses.bsd3; + }) {}; + + "n2o-web" = callPackage + ({ mkDerivation, attoparsec, base, base64-bytestring, binary + , bytestring, case-insensitive, containers, n2o, n2o-protocols + , network, text, websockets + }: + mkDerivation { + pname = "n2o-web"; + version = "0.11.2"; + sha256 = "0d01lsfd2rwavzm01bkk3020r0wpfqyyqjbdf1pc8hw1im3843p6"; + libraryHaskellDepends = [ + attoparsec base base64-bytestring binary bytestring + case-insensitive containers n2o n2o-protocols network text + websockets + ]; + description = "N2O adapter for WebSockets"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "nagios-check" = callPackage ({ mkDerivation, base, bifunctors, exceptions, hspec, mtl , QuickCheck, text @@ -150082,6 +151226,18 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "network-byte-order" = callPackage + ({ mkDerivation, base, bytestring, doctest }: + mkDerivation { + pname = "network-byte-order"; + version = "0.0.0.0"; + sha256 = "0wfy57ip87ksppggpz26grk4w144yld95mf2y0c6mhcs1l8z3div"; + libraryHaskellDepends = [ base bytestring ]; + testHaskellDepends = [ base bytestring doctest ]; + description = "Network byte order utilities"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "network-bytestring" = callPackage ({ mkDerivation, base, bytestring, network, unix }: mkDerivation { @@ -150098,8 +151254,8 @@ self: { ({ mkDerivation, base, bytestring, network, text, time, vector }: mkDerivation { pname = "network-carbon"; - version = "1.0.13"; - sha256 = "06cc62fns07flmsl9gbdicmqqg5icmy3m4n0nvp2xqjk1ax8ws39"; + version = "1.0.14"; + sha256 = "1jrmda71gkcpppzv8s44kms4vz4zj7yb67wyr882s2b4hcf4il5b"; libraryHaskellDepends = [ base bytestring network text time vector ]; @@ -151198,8 +152354,8 @@ self: { }: mkDerivation { pname = "ngx-export-tools"; - version = "0.1.2.0"; - sha256 = "0vkcgj8y4jh63nwh0djxfjvkbpa66zpf32y5912lwj7xf6rm769q"; + version = "0.2.1.1"; + sha256 = "0z406bmfk9b1b6knpxwzkwh8n2cpfwgxdh52vghpgjf69c0yrjq1"; libraryHaskellDepends = [ aeson base binary bytestring ngx-export safe template-haskell ]; @@ -151434,18 +152590,18 @@ self: { }) {}; "nix-deploy" = callPackage - ({ mkDerivation, base, neat-interpolation, optparse-applicative - , optparse-generic, text, turtle + ({ mkDerivation, base, bytestring, neat-interpolation + , optparse-applicative, optparse-generic, text, turtle }: mkDerivation { pname = "nix-deploy"; - version = "1.0.2"; - sha256 = "07cirn4gaaarw5va128f63jp2q7jlghmg4kclya4fvapx963qbya"; + version = "1.0.3"; + sha256 = "0anhmc9g9k40nwj87f24hq4wnj6mkli36dzhzdpa0p3cpg7sh2kh"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ - base neat-interpolation optparse-applicative optparse-generic text - turtle + base bytestring neat-interpolation optparse-applicative + optparse-generic text turtle ]; description = "Deploy Nix-built software to a NixOS machine"; license = stdenv.lib.licenses.asl20; @@ -151458,8 +152614,8 @@ self: { }: mkDerivation { pname = "nix-derivation"; - version = "1.0.1"; - sha256 = "1z36ihzcnll6vpvv8hr95j9vx0j69v7nir6bxgd6wmidpzigkdmc"; + version = "1.0.2"; + sha256 = "16xx4817ncgqvhmydbfr35lhgiw34js2n5liyfing3qvbfprmscw"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -151476,18 +152632,18 @@ self: { "nix-diff" = callPackage ({ mkDerivation, attoparsec, base, containers, Diff, mtl - , nix-derivation, optparse-generic, system-filepath, text, unix + , nix-derivation, optparse-applicative, system-filepath, text, unix , vector }: mkDerivation { pname = "nix-diff"; - version = "1.0.4"; - sha256 = "1ggsqm8bcfvx3l2nji90gwllkq2v832wihf8msfi9br4mqwx234j"; + version = "1.0.5"; + sha256 = "1gs19y4k4aykm3hzpkygdx5wqblcnqxbh3jq3hl18sm8h4cf9871"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ - attoparsec base containers Diff mtl nix-derivation optparse-generic - system-filepath text unix vector + attoparsec base containers Diff mtl nix-derivation + optparse-applicative system-filepath text unix vector ]; description = "Explain why two Nix derivations differ"; license = stdenv.lib.licenses.bsd3; @@ -153010,17 +154166,21 @@ self: { }) {}; "nuxeo" = callPackage - ({ mkDerivation, attoparsec, base, bytestring, conduit - , conduit-extra, text, time + ({ mkDerivation, aeson, attoparsec, base, bytestring, conduit + , conduit-extra, http-conduit, http-types, optparse-applicative + , text, time, url }: mkDerivation { pname = "nuxeo"; - version = "0.2.0.3"; - sha256 = "1assz03rv0vdbgl2ihcr7sbx7ifsv7m2mp6lg2jgy5h0ghnlwzcd"; + version = "0.3.2"; + sha256 = "0m0rnrcay92vi47dd6cbba5vdjzdrmwb9s7wic95cbsb7wmajc72"; + isLibrary = true; + isExecutable = true; libraryHaskellDepends = [ - attoparsec base bytestring conduit conduit-extra text time + aeson attoparsec base bytestring conduit conduit-extra http-conduit + http-types text time url ]; - description = "Nuxeo"; + executableHaskellDepends = [ base optparse-applicative text ]; license = stdenv.lib.licenses.bsd3; }) {}; @@ -154181,20 +155341,21 @@ self: { ({ mkDerivation, aeson, base, base16-bytestring, bytestring , case-insensitive, containers, contravariant, dotenv, hspec , hspec-discover, multiset, postgresql-simple, pretty - , product-profunctors, profunctors, QuickCheck, semigroups, text - , time, time-locale-compat, transformers, uuid, void + , product-profunctors, profunctors, QuickCheck, scientific + , semigroups, text, time, time-locale-compat, transformers, uuid + , void }: mkDerivation { pname = "opaleye"; - version = "0.6.1.0"; - sha256 = "0vjiwpdrff4nrs5ww8q3j77ysrq0if20yfk4gy182lr7nzhhwz0l"; - revision = "2"; - editedCabalFile = "07yn6xzynvjz9p6mv9kzh1sz05dqqsmihznba8s9q36lixlslyag"; + version = "0.6.7003.1"; + sha256 = "1lj4vz1526l11b0mc5y7j9sxf7v6kkzl8c1jymvb1vrqj2qkgxsx"; + revision = "1"; + editedCabalFile = "0nwyz9s81hfziwy7a18gpi0663xy6cfc6fl4vx8a1vkwdyfcjjli"; libraryHaskellDepends = [ aeson base base16-bytestring bytestring case-insensitive contravariant postgresql-simple pretty product-profunctors - profunctors semigroups text time time-locale-compat transformers - uuid void + profunctors scientific semigroups text time time-locale-compat + transformers uuid void ]; testHaskellDepends = [ aeson base containers contravariant dotenv hspec hspec-discover @@ -155583,8 +156744,8 @@ self: { }: mkDerivation { pname = "order-statistic-tree"; - version = "0.1.1.0"; - sha256 = "1gcjlvb0wbjkb3vg1bsiqip3wmacpvbc3s96f0vcm67dssdaws80"; + version = "0.1.1.1"; + sha256 = "13fhnbsx95w79r7lb1mfah8hj3cp6cqpphy31ajc6gcnzbiaqgk5"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base tasty tasty-hunit tasty-quickcheck ]; benchmarkHaskellDepends = [ @@ -155627,8 +156788,8 @@ self: { ({ mkDerivation, base, containers }: mkDerivation { pname = "ordered-containers"; - version = "0.1.0"; - sha256 = "11smyc3z6xhb8j23wlgvvs8dvr82xmzpx2nhvkzazmgzrx3rf26b"; + version = "0.1.1"; + sha256 = "0m86imawwvr0bl18bbv9np8hlhs8ssn4l2dvxswa8f83fm61ai5a"; libraryHaskellDepends = [ base containers ]; description = "Set- and Map-like types that remember the order elements were inserted"; license = stdenv.lib.licenses.bsd3; @@ -155715,8 +156876,8 @@ self: { }: mkDerivation { pname = "orgmode-parse"; - version = "0.2.2"; - sha256 = "1f6wcxkln5ddaa2z7wbkp6wndgq38qv9h1wnn27gqcms02758v2r"; + version = "0.3.0"; + sha256 = "0p1lb3ba060nnr3msqzqy0ymbm4i0nkmwix8xx5zz6hir74ix3y9"; libraryHaskellDepends = [ aeson attoparsec base bytestring containers free hashable old-locale semigroups text thyme unordered-containers @@ -156613,7 +157774,7 @@ self: { maintainers = with stdenv.lib.maintainers; [ peti ]; }) {}; - "pandoc_2_3_1" = callPackage + "pandoc_2_4" = callPackage ({ mkDerivation, aeson, aeson-pretty, base, base64-bytestring , binary, blaze-html, blaze-markup, bytestring, Cabal , case-insensitive, cmark-gfm, containers, criterion, data-default @@ -156623,13 +157784,14 @@ self: { , http-types, JuicyPixels, mtl, network, network-uri, pandoc-types , parsec, process, QuickCheck, random, safe, SHA, skylighting , split, syb, tagsoup, tasty, tasty-golden, tasty-hunit - , tasty-quickcheck, temporary, texmath, text, time, unix - , unordered-containers, vector, weigh, xml, zip-archive, zlib + , tasty-quickcheck, temporary, texmath, text, time + , unicode-transforms, unix, unordered-containers, vector, weigh + , xml, zip-archive, zlib }: mkDerivation { pname = "pandoc"; - version = "2.3.1"; - sha256 = "1wf38mqny53ygpaii0vfjrk0889ya7mlsi7hvvqjakjndcyqflbl"; + version = "2.4"; + sha256 = "1kf1v7zfifh5i1hw5bwdbd78ncp946kx1s501c077vwzdzvcz2ck"; configureFlags = [ "-fhttps" "-f-trypandoc" ]; isLibrary = true; isExecutable = true; @@ -156642,8 +157804,8 @@ self: { Glob haddock-library hslua hslua-module-text HsYAML HTTP http-client http-client-tls http-types JuicyPixels mtl network network-uri pandoc-types parsec process random safe SHA skylighting - split syb tagsoup temporary texmath text time unix - unordered-containers vector xml zip-archive zlib + split syb tagsoup temporary texmath text time unicode-transforms + unix unordered-containers vector xml zip-archive zlib ]; executableHaskellDepends = [ base ]; testHaskellDepends = [ @@ -156933,8 +158095,8 @@ self: { }: mkDerivation { pname = "pandoc-pyplot"; - version = "1.0.2.0"; - sha256 = "0q6qj45g8d95z86lqkwpxw7c929x7q68611602mp2ip31dib11xc"; + version = "1.0.3.0"; + sha256 = "0nzpww21j79s1ww2q26856m6zq325pz32jjd4hanki7ch0ni2kg2"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -156985,31 +158147,8 @@ self: { }: mkDerivation { pname = "pandoc-types"; - version = "1.17.5.2"; - sha256 = "0hppl6drhl4xqav35jybji8g8cpy336mqkp0zb66kdsjya9inpqb"; - libraryHaskellDepends = [ - aeson base bytestring containers deepseq ghc-prim QuickCheck syb - transformers - ]; - testHaskellDepends = [ - aeson base bytestring containers HUnit QuickCheck string-qq syb - test-framework test-framework-hunit test-framework-quickcheck2 - ]; - benchmarkHaskellDepends = [ base criterion ]; - description = "Types for representing a structured document"; - license = stdenv.lib.licenses.bsd3; - }) {}; - - "pandoc-types_1_17_5_3" = callPackage - ({ mkDerivation, aeson, base, bytestring, containers, criterion - , deepseq, ghc-prim, HUnit, QuickCheck, string-qq, syb - , test-framework, test-framework-hunit, test-framework-quickcheck2 - , transformers - }: - mkDerivation { - pname = "pandoc-types"; - version = "1.17.5.3"; - sha256 = "1yrbad67jz8mgdyhl2hvah42g31iwnbvldp16jw87v96y0cbdl72"; + version = "1.17.5.4"; + sha256 = "09wk2zskr0r2llsyif3s0x7vix05l1ya7qacsmmkrlhba5naib1j"; libraryHaskellDepends = [ aeson base bytestring containers deepseq ghc-prim QuickCheck syb transformers @@ -157021,7 +158160,6 @@ self: { benchmarkHaskellDepends = [ base criterion ]; description = "Types for representing a structured document"; license = stdenv.lib.licenses.bsd3; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "pandoc-unlit" = callPackage @@ -157683,8 +158821,8 @@ self: { pname = "parallel-io"; version = "0.3.3"; sha256 = "0i86x3bf8pjlg6mdg1zg5lcrjpg75pbqs2mrgrbp4z4bkcmw051s"; - revision = "1"; - editedCabalFile = "1vlb2x1ghih4l64031rmh7h643c3knh5r5mwilf7g8izb58ypvkm"; + revision = "2"; + editedCabalFile = "0mggzni708nzxlsjbibdzf03s3b5lnqj2zi1hnbh1rd4j4jr07ym"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -158321,8 +159459,8 @@ self: { }: mkDerivation { pname = "parsers-megaparsec"; - version = "0.1.0.0"; - sha256 = "1xn12jbxv72hgkp9xarm9nr9rpqcijlyma47y31jz985r32nhaxj"; + version = "0.1.0.1"; + sha256 = "1fgxnxv5ispf7zg40fa35f1n7x7mk1pc8r96sbqpjbzasga79rx8"; libraryHaskellDepends = [ base fail megaparsec mtl parsers semigroups text transformers ]; @@ -158672,8 +159810,8 @@ self: { }: mkDerivation { pname = "patat"; - version = "0.8.0.0"; - sha256 = "1xbddlc73b0sgd02vxkbhra04wz77q0dn1937k6aq5l1vx663i81"; + version = "0.8.1.2"; + sha256 = "0lvgb0jl0bfzjqpap3gxlhn0mhbwbd15h33l1idpghxqpmzgvczy"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -159300,12 +160438,14 @@ self: { pname = "pcre-heavy"; version = "1.0.0.2"; sha256 = "1lfbjgvl55jh226n307c2w8mrb3l1myzbkjh4j0jfcb8nybzcp4a"; + revision = "1"; + editedCabalFile = "14pprgwxkiaji3rqhsm0fv454wic6qxm7vy4a475yigadb1vz1ls"; libraryHaskellDepends = [ base base-compat bytestring pcre-light semigroups string-conversions template-haskell ]; testHaskellDepends = [ base doctest Glob ]; - description = "A regexp library on top of pcre-light you can actually use"; + description = "A regexp (regex) library on top of pcre-light you can actually use"; license = stdenv.lib.licenses.publicDomain; }) {}; @@ -160195,6 +161335,25 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "persist" = callPackage + ({ mkDerivation, array, base, bytestring, containers, ghc-prim + , QuickCheck, test-framework, test-framework-quickcheck2, text + }: + mkDerivation { + pname = "persist"; + version = "0.1"; + sha256 = "0akiy8qrx71nj8l80hc7llxy7vnpcvjg01dhk499pl5mjaiqz2sq"; + libraryHaskellDepends = [ + array base bytestring containers ghc-prim text + ]; + testHaskellDepends = [ + base bytestring QuickCheck test-framework + test-framework-quickcheck2 text + ]; + description = "Minimal serialization library with focus on performance"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "persist2er" = callPackage ({ mkDerivation, base, optparse-applicative, persistent, text }: mkDerivation { @@ -160911,6 +162070,27 @@ self: { maintainers = with stdenv.lib.maintainers; [ psibi ]; }) {}; + "persistent-template-classy" = callPackage + ({ mkDerivation, base, lens, persistent, persistent-sqlite + , persistent-template, template-haskell, text + }: + mkDerivation { + pname = "persistent-template-classy"; + version = "0.1.0.1"; + sha256 = "0ph5cfm5gj6qydv70s9bmb5ynymqnrhqiwcqpd0s87xj2iv9v46a"; + libraryHaskellDepends = [ + base lens persistent persistent-sqlite persistent-template + template-haskell text + ]; + testHaskellDepends = [ + base lens persistent persistent-sqlite persistent-template + template-haskell text + ]; + description = "Generate classy lens field accessors for persistent models"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "persistent-test" = callPackage ({ mkDerivation, aeson, aeson-compat, attoparsec, base , base64-bytestring, blaze-builder, blaze-html, blaze-markup @@ -162759,6 +163939,8 @@ self: { pname = "pipes-lzma"; version = "0.1.1.2"; sha256 = "0wx23wf1vr8d2nyapxgmpn1jk53hjbla1xss714vkmar7am37vrc"; + revision = "1"; + editedCabalFile = "13nyh3qqv3baifya0vwnnqh1yvr3k2yjrhjq7apigq0s584iyrka"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base bytestring lzma pipes ]; @@ -162956,18 +164138,16 @@ self: { "pipes-s3" = callPackage ({ mkDerivation, aws, base, bytestring, exceptions, http-client , http-client-tls, http-types, pipes, pipes-bytestring, pipes-safe - , QuickCheck, resourcet, tasty, tasty-quickcheck, text + , QuickCheck, resourcet, semigroups, tasty, tasty-quickcheck, text , transformers }: mkDerivation { pname = "pipes-s3"; - version = "0.3.0.3"; - sha256 = "16gm7xjc8vbbajwmq91fj1l5cgd6difrz5g30b8czac4gdgqfppa"; - revision = "3"; - editedCabalFile = "14cz2sfyz0q0jrpjwj9a25flvcm7mhjhihg4pr356niyvnx1b01p"; + version = "0.3.1"; + sha256 = "1z32mgx3w5xiiaxcc22v492f03xlgkprn3pv1hqfqcfgsnxqbj5l"; libraryHaskellDepends = [ aws base bytestring http-client http-client-tls http-types pipes - pipes-bytestring pipes-safe resourcet text transformers + pipes-bytestring pipes-safe resourcet semigroups text transformers ]; testHaskellDepends = [ base bytestring exceptions pipes pipes-bytestring pipes-safe @@ -163264,6 +164444,27 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "pixela" = callPackage + ({ mkDerivation, aeson, base, bytestring, data-default, http-client + , http-client-tls, http-types, split, text, unordered-containers + , uri-encode, vector + }: + mkDerivation { + pname = "pixela"; + version = "0.2.0.0"; + sha256 = "1hwizaxgn6x61vdspn8l3yljjlsglilvlimlz32ngcl1bpdhxh9l"; + libraryHaskellDepends = [ + aeson base bytestring data-default http-client http-client-tls + http-types split text unordered-containers uri-encode vector + ]; + testHaskellDepends = [ + aeson base bytestring data-default http-client http-client-tls + http-types split text unordered-containers uri-encode vector + ]; + description = "Pixela client"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "pixelated-avatar-generator" = callPackage ({ mkDerivation, async, base, bytestring, cli, hspec, JuicyPixels , pureMD5, QuickCheck, random, split @@ -163555,6 +164756,7 @@ self: { ]; description = "Planet Mitchell"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "plankton" = callPackage @@ -164607,6 +165809,18 @@ self: { license = "LGPL"; }) {}; + "polyparse_1_12_1" = callPackage + ({ mkDerivation, base, bytestring, text }: + mkDerivation { + pname = "polyparse"; + version = "1.12.1"; + sha256 = "19fs18g7fvfdkm9zy28cgighjcxfa6mcpqgyp6whmsjkb3h393fx"; + libraryHaskellDepends = [ base bytestring text ]; + description = "A variety of alternative parser combinator libraries"; + license = "LGPL"; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "polyseq" = callPackage ({ mkDerivation, array, base, bytestring, cgi, containers , free-theorems, haskell-src, mtl, network, old-locale, old-time @@ -164970,6 +166184,18 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "port-utils" = callPackage + ({ mkDerivation, async, base, hspec, network, stm, transformers }: + mkDerivation { + pname = "port-utils"; + version = "0.2.0.0"; + sha256 = "1lvalwbizmvrrpbl2l1lblbv0c3qln1ln61x61zn26jxq2h8p7g1"; + libraryHaskellDepends = [ base network ]; + testHaskellDepends = [ async base hspec network stm transformers ]; + description = "Utilities for creating and waiting on ports"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "portable-lines" = callPackage ({ mkDerivation, base, bytestring }: mkDerivation { @@ -166999,14 +168225,14 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "pretty-show_1_8_2" = callPackage + "pretty-show_1_9_2" = callPackage ({ mkDerivation, array, base, filepath, ghc-prim, happy , haskell-lexer, pretty, text }: mkDerivation { pname = "pretty-show"; - version = "1.8.2"; - sha256 = "1fc431kr87hpk3rmdpbdiwsq0iyvh61hjwi4w0cp6zyasx8cg91a"; + version = "1.9.2"; + sha256 = "01vqa5z364cgj73360rpb4rcysfgfyil9l7gxfp96vzcca3gi37a"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -170298,8 +171524,8 @@ self: { }: mkDerivation { pname = "purescript-iso"; - version = "0.0.3"; - sha256 = "15y761jk2r95gdkv85p7ij9npf3a6dlsyidf8y8djzk3m7j8ya2g"; + version = "0.0.4"; + sha256 = "1yqr8yfrc8vjn6h1wsfn0167ca6xj9wcl5a46zn9dklpkx995zyq"; libraryHaskellDepends = [ aeson aeson-attoparsec aeson-diff async attoparsec attoparsec-uri base bytestring containers deepseq emailaddress monad-control mtl @@ -171627,14 +172853,24 @@ self: { ({ mkDerivation, base, QuickCheck, unfoldable-restricted }: mkDerivation { pname = "quickcheck-combinators"; - version = "0.0.4"; - sha256 = "0i5hv58b8vgqbmwb7j8c9xr6qv0v5n2zjh3a9rab8x6hsdlb0mvv"; + version = "0.0.5"; + sha256 = "0qdjls949kmcv8wj3a27p4dz8nb1dq4i99zizkw7qyqn47r9ccxd"; libraryHaskellDepends = [ base QuickCheck unfoldable-restricted ]; - description = "Simple type-level combinators for augmenting QuickCheck instances"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "quickcheck-enum-instances" = callPackage + ({ mkDerivation, base, enum-types, QuickCheck }: + mkDerivation { + pname = "quickcheck-enum-instances"; + version = "0.1.0.0"; + sha256 = "117lpk15z288ad1bzakwf1z0jcdm7w5c0584lzwpgkmgqr3jgzdc"; + libraryHaskellDepends = [ base enum-types QuickCheck ]; + description = "arbitrary instances for small enum types"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "quickcheck-instances" = callPackage ({ mkDerivation, array, base, base-compat, bytestring , case-insensitive, containers, hashable, old-time, QuickCheck @@ -174938,8 +176174,8 @@ self: { pname = "recursion-schemes"; version = "5.0.3"; sha256 = "17x0kjl3yqanx234mb838yy21gw4if6qgzpi5l0b17m8llvp086v"; - revision = "2"; - editedCabalFile = "13n38bchrkkijvy6jvhjskqn1b2kahfa9rvjvjcdn4bih4ylivk7"; + revision = "3"; + editedCabalFile = "05fvpi3dc44h2a097fb9cq1jqdjq2b3sdf5hzfn9g00bid37bb5q"; libraryHaskellDepends = [ base base-orphans comonad free template-haskell th-abstraction transformers @@ -178053,10 +179289,8 @@ self: { }: mkDerivation { pname = "resolv"; - version = "0.1.1.1"; - sha256 = "0wh7wj56l3f2bylz563g5g04a4nydj8acv60hpwa7k3mn792xca9"; - revision = "3"; - editedCabalFile = "0r1i7zrnynqxd3nzq4cz9648s3dmj29w63mcip57620d0fimyghm"; + version = "0.1.1.2"; + sha256 = "0wczdy3vmpfcfwjn1m95bygc5d83m97xxmavhdvy5ayn8c402fp4"; libraryHaskellDepends = [ base base16-bytestring binary bytestring containers ]; @@ -178064,7 +179298,7 @@ self: { base bytestring directory filepath tasty tasty-hunit ]; description = "Domain Name Service (DNS) lookup via the libresolv standard library routines"; - license = stdenv.lib.licenses.gpl3; + license = stdenv.lib.licenses.gpl2; }) {}; "resolve" = callPackage @@ -180306,6 +181540,24 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "rounded" = callPackage + ({ mkDerivation, base, ghc-prim, gmp, hgmp, long-double, mpfr + , reflection, singletons + }: + mkDerivation { + pname = "rounded"; + version = "0.1.0.1"; + sha256 = "04abl192vq1xq7kf9fackcb17wjyxw4068fsks3pxm9dd4iymgls"; + libraryHaskellDepends = [ + base ghc-prim hgmp long-double reflection singletons + ]; + librarySystemDepends = [ gmp mpfr ]; + testHaskellDepends = [ base long-double ]; + description = "Correctly-rounded arbitrary-precision floating-point arithmetic"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {inherit (pkgs) gmp; inherit (pkgs) mpfr;}; + "rounding" = callPackage ({ mkDerivation, array, base, numeric-extras }: mkDerivation { @@ -180757,6 +182009,17 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "rstream" = callPackage + ({ mkDerivation, base, ghc-prim }: + mkDerivation { + pname = "rstream"; + version = "0.1.0.0"; + sha256 = "14l2jww91w993b61xn1m9y9wh27dvy1l1x2fh7g9f0l8mc5a9dpv"; + libraryHaskellDepends = [ base ghc-prim ]; + description = "stream-fusion framework from vector"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "rtcm" = callPackage ({ mkDerivation, aeson, array, base, base64-bytestring , basic-prelude, binary, binary-bits, binary-conduit, bytestring @@ -182093,18 +183356,15 @@ self: { "sandi" = callPackage ({ mkDerivation, base, bytestring, conduit, criterion, exceptions - , HUnit, stringsearch, tasty, tasty-hunit, tasty-quickcheck - , tasty-th + , tasty, tasty-hunit, tasty-quickcheck, tasty-th }: mkDerivation { pname = "sandi"; - version = "0.4.2"; - sha256 = "0dvkpk91n9kz2ha04rvp231ra9sgd1ilyc1qkzf9l03iir7zrh9b"; - libraryHaskellDepends = [ - base bytestring conduit exceptions stringsearch - ]; + version = "0.4.3"; + sha256 = "0ji1zn9nkh8rdm0m9zpxdnz5zw0q0qypzyp2k9fn6j9v08r17p3n"; + libraryHaskellDepends = [ base bytestring conduit exceptions ]; testHaskellDepends = [ - base bytestring HUnit tasty tasty-hunit tasty-quickcheck tasty-th + base bytestring tasty tasty-hunit tasty-quickcheck tasty-th ]; benchmarkHaskellDepends = [ base bytestring criterion ]; description = "Data encoding library"; @@ -183387,6 +184647,18 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "scotty-path-normalizer" = callPackage + ({ mkDerivation, base, bytestring, doctest, scotty, text, wai }: + mkDerivation { + pname = "scotty-path-normalizer"; + version = "0.1.0.0"; + sha256 = "1hv95q3ikf25d9kxzr48fxb2x1331c24n3q5nb47qa7866gy2f4q"; + libraryHaskellDepends = [ base bytestring scotty text wai ]; + testHaskellDepends = [ base doctest ]; + description = "Redirect to a normalized path"; + license = stdenv.lib.licenses.mit; + }) {}; + "scotty-resource" = callPackage ({ mkDerivation, base, containers, http-types, scotty, text , transformers, wai @@ -184200,8 +185472,8 @@ self: { }: mkDerivation { pname = "secp256k1-haskell"; - version = "0.1.3"; - sha256 = "0wdxz8vmk5yfhjrwpynk1zpmvgl1rnwz7zvkx7g7pxxvz3z8rpbz"; + version = "0.1.4"; + sha256 = "1vfbn0fvrbk4hmfhsm8gj3yxyijzfdqlywwir64zrafla4yry73l"; libraryHaskellDepends = [ base base16-bytestring bytestring cereal entropy hashable QuickCheck string-conversions @@ -185072,8 +186344,8 @@ self: { ({ mkDerivation, base, mtl, transformers }: mkDerivation { pname = "seqid"; - version = "0.5.3"; - sha256 = "1wc7a66k42njc0zv0cp4ycfv7jbcqyf77j9m6fikhdppbvn3cbn4"; + version = "0.6.0"; + sha256 = "1zm1zmzp3i60wb17ghr4rp5ljlhvsblll69x2ibjk7kh5icvwfqc"; libraryHaskellDepends = [ base mtl transformers ]; description = "Sequence ID production and consumption"; license = stdenv.lib.licenses.bsd3; @@ -185095,8 +186367,8 @@ self: { ({ mkDerivation, base, io-streams, seqid }: mkDerivation { pname = "seqid-streams"; - version = "0.6.3"; - sha256 = "1wmi4iqh6q45cm1s9ml2yi5b34m8cj7y5a0aicjfsc8nyy0pq48r"; + version = "0.7.0"; + sha256 = "0z80cclvzkr6dg81n96dpan9a7285rlq9nmchiy4raxsjw4cza58"; libraryHaskellDepends = [ base io-streams seqid ]; description = "Sequence ID IO-Streams"; license = stdenv.lib.licenses.bsd3; @@ -185452,6 +186724,8 @@ self: { pname = "servant-JuicyPixels"; version = "0.3.0.4"; sha256 = "10crrcrxap7751wifbc28kr1kv0rjvrx3wlnkajgv3xpr05g00kv"; + revision = "1"; + editedCabalFile = "185ym0ac6gx7f98pd92ykc1ib305lswzjzvykly4ij9vk85jn0ax"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -185496,6 +186770,8 @@ self: { pname = "servant-auth"; version = "0.3.2.0"; sha256 = "12s1m7vqp0ka8nani4cnrb6fad2y5mxji95bba2b6b07ih8xbd3v"; + revision = "1"; + editedCabalFile = "10ss4v45lclf5n0k6rch22zzs59v7p5ppd04dbc97pqxiygpbnd9"; libraryHaskellDepends = [ base ]; description = "Authentication combinators for servant"; license = stdenv.lib.licenses.bsd3; @@ -185512,6 +186788,8 @@ self: { pname = "servant-auth-client"; version = "0.3.3.0"; sha256 = "1pxkwpg1in3anamfvrp8gd7iihng0ikhl4k7ymz5d75ma1qwa2j9"; + revision = "1"; + editedCabalFile = "0jd1frgvghd9zp0rzzar9xxvj6qwg1l7f0zv7977rf6v930fqhw9"; libraryHaskellDepends = [ base bytestring containers servant servant-auth servant-client-core text @@ -185566,8 +186844,8 @@ self: { pname = "servant-auth-docs"; version = "0.2.10.0"; sha256 = "0j1ynnrb6plrhpb2vzs2p7a9jb41llp0j1jwgap7hjhkwhyc7wxd"; - revision = "1"; - editedCabalFile = "0rg38ibrw110c3dllqda7badbf6y89g2ilqybkzipyprwkg8s69x"; + revision = "2"; + editedCabalFile = "0309a6pc8jj24xwqmzj1yslgij9g212hnaqh2qkcvlm6k6riffil"; setupHaskellDepends = [ base Cabal cabal-doctest ]; libraryHaskellDepends = [ base lens servant servant-auth servant-docs text @@ -185649,7 +186927,7 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "servant-auth-server_0_4_1_0" = callPackage + "servant-auth-server_0_4_2_0" = callPackage ({ mkDerivation, aeson, base, base64-bytestring, blaze-builder , bytestring, bytestring-conversion, case-insensitive, cookie , crypto-api, data-default-class, entropy, hspec, hspec-discover @@ -185660,8 +186938,8 @@ self: { }: mkDerivation { pname = "servant-auth-server"; - version = "0.4.1.0"; - sha256 = "1fxh50fjrdi5j88qs2vsrflqdwq3pc8s5h424nhjrpc24w277bqi"; + version = "0.4.2.0"; + sha256 = "000szizds1c8amxm7gl75gpwrlj38gv665bhp59d35wcq03na4ap"; libraryHaskellDepends = [ aeson base base64-bytestring blaze-builder bytestring bytestring-conversion case-insensitive cookie crypto-api @@ -185688,6 +186966,8 @@ self: { pname = "servant-auth-swagger"; version = "0.2.10.0"; sha256 = "04ndbbhdmpgb8yshki6q2j46a5q8fzvlb4nn8x8gv0mqkriq79sh"; + revision = "1"; + editedCabalFile = "105rniz4cmmwr0ynyv75s4ap1fgfwxy2k5mvvj66gwpvzmj55cnx"; libraryHaskellDepends = [ base lens servant servant-auth servant-swagger swagger2 text ]; @@ -185921,8 +187201,8 @@ self: { pname = "servant-client"; version = "0.14"; sha256 = "0jr2057y7vp6d2jcnisawkajinnqm68h024crh929r9fdka0p1n6"; - revision = "2"; - editedCabalFile = "087ja0xbwm1yg38i5pc26fxsjx4pfdcgqmw0h1lvf0z1alz8rq05"; + revision = "3"; + editedCabalFile = "1rjjqxyyf51bjq8li8yilng5pjd9a5n3d8zniqmfw3hys6dz8n8g"; libraryHaskellDepends = [ base base-compat bytestring containers exceptions http-client http-media http-types monad-control mtl semigroupoids @@ -185951,8 +187231,8 @@ self: { pname = "servant-client-core"; version = "0.14.1"; sha256 = "0qfpakwl6yj6l2br9wa9zs0v7nzmj4bngspw6p536swx39npnkn2"; - revision = "1"; - editedCabalFile = "04xr6zpslw7pyzxp22qd8k2w9azc3pds5gplnwni12waqahf410i"; + revision = "2"; + editedCabalFile = "02pvrccfwvvy53gma56jcqnbia3pm1pncyghdkjp519bwff9iwvb"; libraryHaskellDepends = [ base base-compat base64-bytestring bytestring containers exceptions free generics-sop http-api-data http-media http-types network-uri @@ -186356,8 +187636,8 @@ self: { }: mkDerivation { pname = "servant-http2-client"; - version = "0.1.0.1"; - sha256 = "0jlbczbgbkjx4hai24csnd07r074s36g5hbpizhdxiqr3dcjk8pw"; + version = "0.1.0.2"; + sha256 = "0rjzc1dyj0njmh590ays5ma6243240qakrjgzi9qinvkgb7lzad2"; libraryHaskellDepends = [ base binary bytestring case-insensitive containers exceptions http-media http-types http2 http2-client mtl servant-client-core @@ -186370,6 +187650,7 @@ self: { ]; description = "Generate HTTP2 clients from Servant API descriptions"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "servant-iCalendar" = callPackage @@ -186441,8 +187722,8 @@ self: { }: mkDerivation { pname = "servant-kotlin"; - version = "0.1.1.2"; - sha256 = "1ad1n1yp6b125fa5gjjnbksnjqf714jf9d8cvxrvpwkl9lxn9ppb"; + version = "0.1.1.3"; + sha256 = "07adjx1smqg5x87dklgknlmkavns2axmhqw97fk0jnp99rb1rpb2"; libraryHaskellDepends = [ base containers directory formatting lens servant servant-foreign text time wl-pprint-text @@ -186784,10 +188065,8 @@ self: { }: mkDerivation { pname = "servant-quickcheck"; - version = "0.0.7.2"; - sha256 = "0zsf68c44yijmgkcd2qmcwz9p0kiix6dzhk3g4ifz60s6kv3jfbh"; - revision = "1"; - editedCabalFile = "1slgq8q0hmh904ssn5sfmi6mbpd3vkqvc59m3g9kfgzf5j70py2h"; + version = "0.0.7.3"; + sha256 = "0d904xfw5q7qcwkp5n7v18drc1idssvfwic2ksfmqlxisnxmyp5r"; libraryHaskellDepends = [ aeson base base-compat-batteries bytestring case-insensitive clock data-default-class hspec http-client http-media http-types mtl @@ -187266,6 +188545,7 @@ self: { ]; description = "Servant swagger ui: Jens-Ole Graulund theme"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "servant-swagger-ui-redoc" = callPackage @@ -187282,6 +188562,7 @@ self: { ]; description = "Servant swagger ui: ReDoc theme"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "servant-tracing" = callPackage @@ -187498,7 +188779,7 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; - "serverless-haskell_0_7_5" = callPackage + "serverless-haskell_0_8_2" = callPackage ({ mkDerivation, aeson, aeson-casing, aeson-extra, amazonka-core , amazonka-kinesis, amazonka-s3, base, bytestring, case-insensitive , hspec, hspec-discover, http-types, iproute, lens, raw-strings-qq @@ -187506,8 +188787,8 @@ self: { }: mkDerivation { pname = "serverless-haskell"; - version = "0.7.5"; - sha256 = "13l5day4dlwyykwx17v2znyh0ck1paaxjzzawnjklcjzk1rzj0i3"; + version = "0.8.2"; + sha256 = "1ia1vjiw71qkqdpbna2jgxznwlhbh184fr5m95dcyl5kwwlb3nb8"; libraryHaskellDepends = [ aeson aeson-casing aeson-extra amazonka-core amazonka-kinesis amazonka-s3 base bytestring case-insensitive http-types iproute @@ -188435,10 +189716,8 @@ self: { }: mkDerivation { pname = "shake-ats"; - version = "1.10.0.1"; - sha256 = "1p95r4ksfrb4hs9v75iq9iz565qz43k3cw63sz32nphqn204dbxz"; - revision = "1"; - editedCabalFile = "0x23r58i4yhf9rcaxfdy09nr93cpkr0cmxrwcn11hgcr1nkzaa0d"; + version = "1.10.2.0"; + sha256 = "0kc7yy2qv4d2n3j0qwsg37ga9yyb380d6zni08l1jabrl84maly8"; libraryHaskellDepends = [ base binary dependency directory hs2ats language-ats microlens shake shake-c shake-cabal shake-ext text @@ -188795,6 +190074,19 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "shannon-fano" = callPackage + ({ mkDerivation, base, bytestring, QuickCheck, split }: + mkDerivation { + pname = "shannon-fano"; + version = "0.1.0.1"; + sha256 = "11xpz5mi1yk9zcy22fhn6j4xnyifxgn07nd6nrx588h1g6w8r2df"; + libraryHaskellDepends = [ base bytestring split ]; + testHaskellDepends = [ base QuickCheck ]; + description = "Shannon-fano compression algorithm implementation in Haskell"; + license = stdenv.lib.licenses.gpl3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "shapefile" = callPackage ({ mkDerivation, base, binary, bytestring, data-binary-ieee754, dbf , filepath, rwlock @@ -189055,8 +190347,8 @@ self: { ({ mkDerivation, base, containers, text, unix }: mkDerivation { pname = "shell-monad"; - version = "0.6.5"; - sha256 = "0vg2g65km3i963scyj7fn17g562wg0mh88syxqrf7favnljid1bk"; + version = "0.6.6"; + sha256 = "1z3anvjcix25i2zzwnln2hnpzacwiss95xhyc0mclc33v0j5k038"; libraryHaskellDepends = [ base containers text unix ]; description = "shell monad"; license = stdenv.lib.licenses.bsd3; @@ -189243,6 +190535,28 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "shh" = callPackage + ({ mkDerivation, async, base, deepseq, directory, filepath, mtl + , process, split, tasty, tasty-hunit, tasty-quickcheck + , template-haskell, unix + }: + mkDerivation { + pname = "shh"; + version = "0.1.0.0"; + sha256 = "0ixvfwrz1bsj1c2ln7fhvf6wawf75nzqfb784xgral33hmflm518"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + async base deepseq directory filepath mtl process split + template-haskell unix + ]; + executableHaskellDepends = [ base ]; + testHaskellDepends = [ base tasty tasty-hunit tasty-quickcheck ]; + description = "Simple shell scripting from Haskell"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "shift" = callPackage ({ mkDerivation, ansi-terminal, base, binary, bytestring , composition-prelude, data-default, microlens @@ -189928,6 +191242,23 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "simple-affine-space" = callPackage + ({ mkDerivation, base, deepseq, directory, filepath, hlint, process + , regex-posix + }: + mkDerivation { + pname = "simple-affine-space"; + version = "0.1"; + sha256 = "02cy4vnl3fy18dsfxazh60bqgk5c1gw2x460x6i1fb5qysw7q8nh"; + libraryHaskellDepends = [ base deepseq ]; + testHaskellDepends = [ + base directory filepath hlint process regex-posix + ]; + description = "A simple library for affine and vector spaces"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "simple-atom" = callPackage ({ mkDerivation, base, containers, deepseq }: mkDerivation { @@ -189980,8 +191311,8 @@ self: { ({ mkDerivation, base, directory, filepath, process }: mkDerivation { pname = "simple-cmd"; - version = "0.1.1"; - sha256 = "0y9ga7m3zykrmgfzys6g7k1z79spp2319ln4sayw8i0abpwh63m9"; + version = "0.1.2"; + sha256 = "10jdyl1ghzczxw5bi8s1694fla42s1aknmj5grxndidwzf95b8g6"; libraryHaskellDepends = [ base directory filepath process ]; description = "Simple String-based process commands"; license = stdenv.lib.licenses.bsd3; @@ -190467,8 +191798,8 @@ self: { ({ mkDerivation, base, process }: mkDerivation { pname = "simple-smt"; - version = "0.9.1"; - sha256 = "13dg61jdgby49lpdb53anrg39wn8dwgvg6jpn8vh0y8rf2zilq9b"; + version = "0.9.3"; + sha256 = "17v8zpiiha8kyb4xbrqdnfibf1dwzf9lbhxj9kffvl948ygxdp8x"; libraryHaskellDepends = [ base process ]; description = "A simple way to interact with an SMT solver process"; license = stdenv.lib.licenses.bsd3; @@ -190611,8 +191942,8 @@ self: { }: mkDerivation { pname = "simple-vec3"; - version = "0.4.0.8"; - sha256 = "0jikq60ixk21gb7j3rayxqha73m9vn4n8kz4799rcw5qiii7rr4a"; + version = "0.4.0.9"; + sha256 = "1rx4nifv75lpxrdgq6x3a61d56qp0ln9rhf2d10l2ds049dlq0pz"; libraryHaskellDepends = [ base QuickCheck vector ]; testHaskellDepends = [ base doctest doctest-driver-gen tasty tasty-quickcheck @@ -190840,10 +192171,10 @@ self: { ({ mkDerivation, base, containers }: mkDerivation { pname = "simtreelo"; - version = "0.1.1.3"; - sha256 = "148j6z8rxqaiwfjgxz780fy8w8xv8a8gwida61lfir677jlkwgh9"; + version = "0.1.1.4"; + sha256 = "0a8414006gdya8b4dw38251kim3x2i5g7m03ga479ialghralrc8"; libraryHaskellDepends = [ base containers ]; - description = "Loader for data organized in a tree"; + description = "Load data organized in a tree"; license = stdenv.lib.licenses.gpl3; }) {}; @@ -191104,8 +192435,8 @@ self: { }: mkDerivation { pname = "sitepipe"; - version = "0.3.0.1"; - sha256 = "1iv0ndllixwn9vj7gqavv1ymfxfxqm4xqqzxqf1y8qiq240b3j6l"; + version = "0.3.0.2"; + sha256 = "0f26sqpf8rjrbpk6q9hp0q705hhmhyp71jyj5w9jgq6mnj34rxy8"; libraryHaskellDepends = [ aeson base bytestring containers directory exceptions filepath Glob lens lens-aeson megaparsec MissingH mtl mustache @@ -191637,6 +192968,30 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "slack-web_0_2_0_8" = callPackage + ({ mkDerivation, aeson, base, containers, errors, hspec + , http-api-data, http-client, http-client-tls, megaparsec, mtl + , servant, servant-client, servant-client-core, text, time + , transformers + }: + mkDerivation { + pname = "slack-web"; + version = "0.2.0.8"; + sha256 = "00sm4sh8ik472l5hk1yifczppr6nxx9b68byilg0zwzy1c4mq9kg"; + libraryHaskellDepends = [ + aeson base containers errors http-api-data http-client + http-client-tls megaparsec mtl servant servant-client + servant-client-core text time transformers + ]; + testHaskellDepends = [ + aeson base containers errors hspec http-api-data megaparsec text + time + ]; + description = "Bindings for the Slack web API"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "slate" = callPackage ({ mkDerivation, base, directory, filepath, htoml , optparse-applicative, process, string-conversions @@ -191644,8 +192999,8 @@ self: { }: mkDerivation { pname = "slate"; - version = "0.11.0.0"; - sha256 = "0y6l3cjlh0hkc3nch7fwvxpv2i5r9qv6r1kdi3savi0vp0dvgdy8"; + version = "0.12.0.0"; + sha256 = "01qi6k9gcz6y8x8hlvsmm2irfvcsbdqqvzg5kgf2x02idmh9zy1a"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -191685,15 +193040,15 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; - "slave-thread_1_0_2_2" = callPackage + "slave-thread_1_0_2_3" = callPackage ({ mkDerivation, base, deferred-folds, foldl, HTF, mmorph , partial-handler, QuickCheck, quickcheck-instances, rerebase , SafeSemaphore, stm-containers, transformers }: mkDerivation { pname = "slave-thread"; - version = "1.0.2.2"; - sha256 = "1jf8n989gsxbqkyxj8kd523dxp5bxs9cs4s6jd4j95mvij6pgpgl"; + version = "1.0.2.3"; + sha256 = "131zq1lb38mmavzdb2ysmnifmhvglb438q1p31pp5x4pmhdhnglj"; libraryHaskellDepends = [ base deferred-folds foldl mmorph partial-handler stm-containers transformers @@ -192550,8 +193905,8 @@ self: { pname = "snap-core"; version = "1.0.3.2"; sha256 = "136q7l4hd5yn5hb507q1ziqx124ma1lkzh5dx0n150p8dx3rhhsc"; - revision = "2"; - editedCabalFile = "0m0rjsgv0lkd0y9ragn478ibw98c9iys4mrj26x8ihasdnzgkqxq"; + revision = "3"; + editedCabalFile = "0wlhn33r7c9g7j23y006ddq9d87lkmianvvfrbl8jd8mvjvj2gfa"; libraryHaskellDepends = [ attoparsec base bytestring bytestring-builder case-insensitive containers directory filepath hashable HUnit io-streams lifted-base @@ -192628,8 +193983,8 @@ self: { }: mkDerivation { pname = "snap-extras"; - version = "0.12.2.0"; - sha256 = "18d1gfpk2gzvaidb6l13y64540hfyqk5hw6gpx7z495ay1dafdzr"; + version = "0.12.2.1"; + sha256 = "0mzvw49v6i77ysdlxfrdva5kn0vj9p5h2br6qlwvhdwqq8269gqp"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -192754,8 +194109,8 @@ self: { pname = "snap-server"; version = "1.1.0.0"; sha256 = "0vvw9n8xs272qdlrf3dxhnva41zh3awi7pf022rrjj75lj8a77i4"; - revision = "2"; - editedCabalFile = "03jmxbz9bf0yr3vzf3xa7ajbz3q9i6cn7bzqan4vy5f26c0n6xld"; + revision = "3"; + editedCabalFile = "0a9d3nqb5rvgm25nak68lp6yj9m6cwhbgdbg5l7ib5i2czcg7yjh"; configureFlags = [ "-fopenssl" ]; isLibrary = true; isExecutable = true; @@ -194065,8 +195420,8 @@ self: { }: mkDerivation { pname = "socket"; - version = "0.8.1.0"; - sha256 = "1sbxcs1fmd7x95yk7sqv3q6gg2azn77l6sngiiv692966a0bxba0"; + version = "0.8.2.0"; + sha256 = "176px9n2f8mnxi3r2sqshrpbp7i11fskch1nkjhgqzq917sz0zgb"; libraryHaskellDepends = [ base bytestring ]; testHaskellDepends = [ async base bytestring QuickCheck tasty tasty-hunit tasty-quickcheck @@ -195011,14 +196366,21 @@ self: { }) {}; "spdx" = callPackage - ({ mkDerivation, base, tasty, tasty-quickcheck, transformers }: + ({ mkDerivation, base, base-compat, Cabal, containers, QuickCheck + , tasty, tasty-quickcheck, transformers + }: mkDerivation { pname = "spdx"; - version = "0.2.2.0"; - sha256 = "1jxxivxlhzjx4idy69qhqqv37sspqhk3f3i93mydzn8cyhn87aqp"; - libraryHaskellDepends = [ base transformers ]; - testHaskellDepends = [ base tasty tasty-quickcheck ]; - description = "SPDX license expression language"; + version = "1"; + sha256 = "1vw6pqj86slgzgbrd6kmsn5xlbxln0cys9qxxa47ypfy4spxmfkd"; + libraryHaskellDepends = [ base Cabal containers transformers ]; + testHaskellDepends = [ + base base-compat Cabal tasty tasty-quickcheck + ]; + benchmarkHaskellDepends = [ + base base-compat Cabal QuickCheck tasty-quickcheck + ]; + description = "SPDX license expression language, Extras"; license = stdenv.lib.licenses.bsd3; hydraPlatforms = stdenv.lib.platforms.none; }) {}; @@ -195713,6 +197075,7 @@ self: { ]; description = "JSON API to HTML website wrapper"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "spritz" = callPackage @@ -196454,11 +197817,12 @@ self: { ({ mkDerivation, base, gdp, ghc-prim, primitive }: mkDerivation { pname = "st2"; - version = "0.1.0.0"; - sha256 = "0gly0l191cwnahdrmgi1i2rx4430b9d684kl9s5frxa3k1711agj"; + version = "0.1.0.2"; + sha256 = "0i7v9yacwgf6aj67c4r2n8zcm07jrcff9nl52sx7ylsjs65ym2qz"; libraryHaskellDepends = [ base gdp ghc-prim primitive ]; description = "shared heap regions between local mutable state threads"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "stable-heap" = callPackage @@ -197916,6 +199280,30 @@ self: { license = stdenv.lib.licenses.mit; }) {}; + "statsdi" = callPackage + ({ mkDerivation, base, bytestring, dequeue, ether, hashable, hspec + , network, random, stm, tasty, tasty-hspec, template-haskell, time + , transformers, transformers-lift, unordered-containers + }: + mkDerivation { + pname = "statsdi"; + version = "0.2.0.0"; + sha256 = "1gbaxrvn8ilrj808hplqlibawy9kdmfb5pc2yzzdghmcsjys24g1"; + revision = "1"; + editedCabalFile = "02kf7pigkvqsm720l8rn6m3gdjqrdhli5yijsjf8n11mj6k8xrk0"; + libraryHaskellDepends = [ + base bytestring dequeue ether hashable network random stm + template-haskell time transformers transformers-lift + unordered-containers + ]; + testHaskellDepends = [ + base bytestring hspec network stm tasty tasty-hspec time + ]; + description = "A lovely [Dog]StatsD implementation"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "status-notifier-item" = callPackage ({ mkDerivation, base, bytestring, containers, dbus, dbus-hslogger , filepath, hslogger, lens, network, optparse-applicative, spool @@ -198686,6 +200074,18 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "storable-complex_0_2_3_0" = callPackage + ({ mkDerivation, base, base-orphans }: + mkDerivation { + pname = "storable-complex"; + version = "0.2.3.0"; + sha256 = "0fnwbfmd5vsaaqvf9182qdcjrzcfjd1zhdyvjwzifbwvn6r9kx4s"; + libraryHaskellDepends = [ base base-orphans ]; + description = "Storable instance for Complex"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "storable-endian" = callPackage ({ mkDerivation, base, byteorder }: mkDerivation { @@ -198792,57 +200192,6 @@ self: { "store" = callPackage ({ mkDerivation, array, async, base, base-orphans , base64-bytestring, bifunctors, bytestring, cereal, cereal-vector - , containers, contravariant, criterion, cryptohash, deepseq - , directory, filepath, free, ghc-prim, hashable, hspec - , hspec-smallcheck, integer-gmp, lifted-base, monad-control - , mono-traversable, network, primitive, resourcet, safe, semigroups - , smallcheck, store-core, syb, template-haskell, text, th-lift - , th-lift-instances, th-orphans, th-reify-many, th-utilities, time - , transformers, unordered-containers, vector - , vector-binary-instances, void, weigh - }: - mkDerivation { - pname = "store"; - version = "0.5.0"; - sha256 = "1ivr2pvfja2plhp625wjv9lbd47vmydp33f31ljwdyzqik2j7vij"; - libraryHaskellDepends = [ - array async base base-orphans base64-bytestring bifunctors - bytestring containers contravariant cryptohash deepseq directory - filepath free ghc-prim hashable hspec hspec-smallcheck integer-gmp - lifted-base monad-control mono-traversable network primitive - resourcet safe semigroups smallcheck store-core syb - template-haskell text th-lift th-lift-instances th-orphans - th-reify-many th-utilities time transformers unordered-containers - vector void - ]; - testHaskellDepends = [ - array async base base-orphans base64-bytestring bifunctors - bytestring cereal cereal-vector containers contravariant criterion - cryptohash deepseq directory filepath free ghc-prim hashable hspec - hspec-smallcheck integer-gmp lifted-base monad-control - mono-traversable network primitive resourcet safe semigroups - smallcheck store-core syb template-haskell text th-lift - th-lift-instances th-orphans th-reify-many th-utilities time - transformers unordered-containers vector vector-binary-instances - void weigh - ]; - benchmarkHaskellDepends = [ - array async base base-orphans base64-bytestring bifunctors - bytestring containers contravariant criterion cryptohash deepseq - directory filepath free ghc-prim hashable hspec hspec-smallcheck - integer-gmp lifted-base monad-control mono-traversable network - primitive resourcet safe semigroups smallcheck store-core syb - template-haskell text th-lift th-lift-instances th-orphans - th-reify-many th-utilities time transformers unordered-containers - vector void - ]; - description = "Fast binary serialization"; - license = stdenv.lib.licenses.mit; - }) {}; - - "store_0_5_0_1" = callPackage - ({ mkDerivation, array, async, base, base-orphans - , base64-bytestring, bifunctors, bytestring, cereal, cereal-vector , clock, containers, contravariant, criterion, cryptohash, deepseq , directory, filepath, free, ghc-prim, hashable, hspec , hspec-smallcheck, integer-gmp, lifted-base, monad-control @@ -198889,7 +200238,6 @@ self: { ]; description = "Fast binary serialization"; license = stdenv.lib.licenses.mit; - hydraPlatforms = stdenv.lib.platforms.none; }) {}; "store-core" = callPackage @@ -198970,15 +200318,15 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "stratosphere_0_26_1" = callPackage + "stratosphere_0_26_2" = callPackage ({ mkDerivation, aeson, aeson-pretty, base, bytestring, containers , hashable, hspec, hspec-discover, lens, template-haskell, text , unordered-containers }: mkDerivation { pname = "stratosphere"; - version = "0.26.1"; - sha256 = "0npmnj71gaf61gcxi772h4sgsz68j5jk7v5z3bjc120z7vc1a22v"; + version = "0.26.2"; + sha256 = "0f4vqll4bfwrf6hysdnh1gkjl79qcs1pwn3p6224xlqzmajb9hc5"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -199429,8 +200777,8 @@ self: { }: mkDerivation { pname = "streaming-fft"; - version = "0.1.0.0"; - sha256 = "1qphhbap1va897ghcr8v4d3nnpcb4w0b422d24isz8rg138m99wi"; + version = "0.1.0.1"; + sha256 = "1bs0wqcns0nn62rw04a1574qakqhflxhsybchf9pzig0gyrj4538"; libraryHaskellDepends = [ base contiguous-fft ghc-prim prim-instances primitive streaming ]; @@ -199666,7 +201014,7 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "streamly_0_5_1" = callPackage + "streamly_0_5_2" = callPackage ({ mkDerivation, atomic-primops, base, clock, containers, deepseq , exceptions, gauge, ghc-prim, heaps, hspec, lockfree-queue , monad-control, mtl, QuickCheck, random, transformers @@ -199674,8 +201022,8 @@ self: { }: mkDerivation { pname = "streamly"; - version = "0.5.1"; - sha256 = "04hc87jwcfpbwydm75ic3rz87m76s39aysi14m514nib87xprbji"; + version = "0.5.2"; + sha256 = "1pla9356yhf6zv2yz4mh8g1dslzdkkych4jrjyi4rw66frvw0jg6"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -200458,8 +201806,8 @@ self: { }: mkDerivation { pname = "structured-cli"; - version = "2.0.0.1"; - sha256 = "1xgf49pd1dm80qp1h14f2nyqv71axrijrd8k66jmmqkczf24jah2"; + version = "2.2.1.0"; + sha256 = "1b75wnmprbb4sfnwyn5arc205ad5rlyz4hv63ai35i9iryax875s"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -201152,28 +202500,27 @@ self: { "super-user-spark" = callPackage ({ mkDerivation, aeson, aeson-pretty, base, bytestring, directory , filepath, genvalidity, genvalidity-hspec, genvalidity-hspec-aeson - , genvalidity-path, hashable, hspec, hspec-core, HUnit, iostring - , mtl, optparse-applicative, parsec, path, path-io, process - , QuickCheck, text, transformers, unix, validity, validity-path + , genvalidity-path, hashable, hspec, hspec-core, mtl + , optparse-applicative, parsec, path, path-io, process, QuickCheck + , text, transformers, unix, validity, validity-path }: mkDerivation { pname = "super-user-spark"; - version = "0.4.0.0"; - sha256 = "1yk0kkp9rj63m7vqvki7zs3l8r5da8as7hpw1l6qk2gf74lpkfdy"; + version = "0.4.0.1"; + sha256 = "0pxkvc1vjarh4p5rqnai6nlsqxv9as8jvqs2vpywl1525nsfyvy5"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ - aeson aeson-pretty base bytestring directory filepath hashable - iostring mtl optparse-applicative parsec path path-io process text - unix validity validity-path + aeson aeson-pretty base bytestring directory filepath hashable mtl + optparse-applicative parsec path path-io process text unix validity + validity-path ]; executableHaskellDepends = [ base ]; testHaskellDepends = [ aeson aeson-pretty base bytestring directory filepath genvalidity genvalidity-hspec genvalidity-hspec-aeson genvalidity-path hashable - hspec hspec-core HUnit iostring mtl optparse-applicative parsec - path path-io process QuickCheck text transformers unix validity - validity-path + hspec hspec-core mtl optparse-applicative parsec path path-io + process QuickCheck text transformers unix validity validity-path ]; description = "Configure your dotfile deployment with a DSL"; license = stdenv.lib.licenses.mit; @@ -201825,8 +203172,8 @@ self: { pname = "swagger2"; version = "2.3.0.1"; sha256 = "1l8piv2phl8kq3rgna8wld80b569vazqk2ll1rgs5iakm42lxr1f"; - revision = "1"; - editedCabalFile = "12w7bsld9wp2nm61vwdwb6ndjd3g99i0g4hjr32mrycmf41yvs1a"; + revision = "2"; + editedCabalFile = "0dfxf47mzzb5rmln2smsk0qx53kj1lc3a087r52g2rzz6971zivb"; setupHaskellDepends = [ base Cabal cabal-doctest ]; libraryHaskellDepends = [ aeson base base-compat-batteries bytestring containers generics-sop @@ -201937,15 +203284,15 @@ self: { license = stdenv.lib.licenses.lgpl21; }) {}; - "swish_0_10_0_0" = callPackage + "swish_0_10_0_1" = callPackage ({ mkDerivation, base, containers, directory, filepath, hashable , HUnit, intern, mtl, network-uri, old-locale, polyparse , semigroups, test-framework, test-framework-hunit, text, time }: mkDerivation { pname = "swish"; - version = "0.10.0.0"; - sha256 = "1dm388lwfxrpdbqm3fdk9gjr8pp8y8s02wl9aan86av956g2kr4h"; + version = "0.10.0.1"; + sha256 = "1ikqqyra9r79vw2s969kyqh1vgijcr33y7irriylsp51n7pspagk"; isLibrary = true; isExecutable = true; enableSeparateDataOutput = true; @@ -201970,8 +203317,8 @@ self: { }: mkDerivation { pname = "sws"; - version = "0.4.2.0"; - sha256 = "0bwfpw348g167a195f8g4cp3h553hkanm6s67bairhn8qprh8az4"; + version = "0.4.3.0"; + sha256 = "0zwh7az9pgsgvx9wbjnz8lzy2v8lrkkwv3h72jfy5sj50xylrzbr"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ @@ -202214,8 +203561,8 @@ self: { pname = "symbol"; version = "0.2.4"; sha256 = "0cc8kdm68pirb0s7n46v0yvw5b718qf7qip40jkg5q3c3xsafx6h"; - revision = "1"; - editedCabalFile = "01ab7600ja88wfvg9x8zmxksw44j9klmm71y9zmig7qxs1qslb25"; + revision = "2"; + editedCabalFile = "0jdbaap11pkgb6m98v57k7qnx62pqxy7pa2i7293ywa4q305qgm1"; libraryHaskellDepends = [ base containers deepseq ]; description = "A 'Symbol' type for fast symbol comparison"; license = stdenv.lib.licenses.bsd3; @@ -204578,6 +205925,8 @@ self: { pname = "tasty-hedgehog-coverage"; version = "0.1.0.0"; sha256 = "1d2hnhkpk71k0xjw63jsn6fa4ih01xqn4dgdbflp6yrs0zw6p95c"; + revision = "1"; + editedCabalFile = "1p3d9w24q39fnljv9m5a8anpv3j3cvazbca4d3hqrjx5w06ik42f"; libraryHaskellDepends = [ base containers hedgehog mtl tagged tasty tasty-hedgehog text transformers wl-pprint-annotated @@ -205133,6 +206482,8 @@ self: { pname = "tdigest"; version = "0.2.1"; sha256 = "0kmqmzjcs406hv2fv9bkfayxpsd41dbry8bpkhy4y1jdgh33hvnl"; + revision = "1"; + editedCabalFile = "1jrq22j9jbvx31pspwjvyb539gix7vfb8cinqkkb2abmr0jrhibn"; setupHaskellDepends = [ base Cabal cabal-doctest ]; libraryHaskellDepends = [ base base-compat binary deepseq reducers semigroupoids transformers @@ -206011,8 +207362,8 @@ self: { }: mkDerivation { pname = "term-rewriting"; - version = "0.3"; - sha256 = "03y5s9c9n1mnij3yh5z4c69isg5cbpwczj5sjjvajqaaqf6xy5f3"; + version = "0.3.0.1"; + sha256 = "0fa2yqdhw93r7byx47z050sq2yc0arfsvwnzl4jp1vyhdzarfwqd"; libraryHaskellDepends = [ ansi-wl-pprint array base containers mtl multiset parsec union-find-array @@ -206889,10 +208240,8 @@ self: { }: mkDerivation { pname = "texmath"; - version = "0.11.1.1"; - sha256 = "1syvyiw84as79c76mssw1p4d3lrnghnwdyy4ip1w48qd07fadxf6"; - revision = "1"; - editedCabalFile = "0740lpg42r0wdj9hm9gvnzrjka9mqpkzazx2s3qnliiigy39zk96"; + version = "0.11.1.2"; + sha256 = "1wac48qlcwrfm5j1yng27929iqnj2x0zkj7ffrwkj3rchf0i4grp"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -207609,6 +208958,8 @@ self: { pname = "text-show"; version = "3.7.5"; sha256 = "1by89i3c6qyjh7jjld06wb2sphb236rbvwb1mmvq8f6mxliiyf1r"; + revision = "1"; + editedCabalFile = "1v8czpi9mn54850k0pilqh1f3yfr5n5vykmg5k57wmrdpx25vkws"; libraryHaskellDepends = [ array base base-compat-batteries bifunctors bytestring bytestring-builder containers contravariant generic-deriving @@ -211193,24 +212544,21 @@ self: { }) {}; "toodles" = callPackage - ({ mkDerivation, aeson, base, blaze-html, bytestring, cmdargs - , directory, filepath, http-types, megaparsec, MissingH - , regex-posix, servant, servant-blaze, servant-server, strict, text - , transformers, wai, warp, yaml + ({ mkDerivation, aeson, base, blaze-html, cmdargs, directory + , megaparsec, MissingH, regex-posix, servant, servant-blaze + , servant-server, strict, text, wai, warp, yaml }: mkDerivation { pname = "toodles"; - version = "0.1.0.9"; - sha256 = "01gjxd4pclilm19iw7nkr23pmyavd7d9k0wa1c63hwhdzm1591f7"; - revision = "3"; - editedCabalFile = "08zadf5r79dpw9g0hg6lsnyvcnpprzb9d0lfs67kpyigm5ih9w8w"; + version = "0.1.3"; + sha256 = "09ph9jmhma211r16fyvib8fwv3jm8v526swjgwrzsl9c97xfpzjg"; isLibrary = false; isExecutable = true; enableSeparateDataOutput = true; executableHaskellDepends = [ - aeson base blaze-html bytestring cmdargs directory filepath - http-types megaparsec MissingH regex-posix servant servant-blaze - servant-server strict text transformers wai warp yaml + aeson base blaze-html cmdargs directory megaparsec MissingH + regex-posix servant servant-blaze servant-server strict text wai + warp yaml ]; description = "Manage the TODO entries in your code"; license = stdenv.lib.licenses.mit; @@ -211743,8 +213091,10 @@ self: { }: mkDerivation { pname = "traildb"; - version = "0.1.4.0"; - sha256 = "1qp3m8vfjy9kim9jikhxplyp6c21scj18n9qnb0pfd0hpjyigd9b"; + version = "0.1.4.1"; + sha256 = "1h3pscbxjl3cpcxbch4ydiv6y5j54k99v8kq61jv01gv1vjisd2r"; + isLibrary = true; + isExecutable = true; libraryHaskellDepends = [ base bytestring containers directory exceptions primitive profunctors text time transformers unix vector @@ -212413,8 +213763,8 @@ self: { pname = "tree-diff"; version = "0.0.1"; sha256 = "049v44c520jy3icxlnrvbdblh3mjmvd7m6qmkzxbzkf02x63xqmz"; - revision = "5"; - editedCabalFile = "1rj2n9d6mmk6zijnlc0q72s2qs8hhwhf25gpqqswaiqhbbh7gxi2"; + revision = "6"; + editedCabalFile = "1wyhygrpqphxzzwlrk6nl4h5xbyx6zi0y34i1nxvsy726fl5idai"; libraryHaskellDepends = [ aeson ansi-terminal ansi-wl-pprint base base-compat bytestring containers generics-sop hashable MemoTrie parsec parsers pretty @@ -215024,8 +216374,8 @@ self: { ({ mkDerivation, base, hspec, QuickCheck }: mkDerivation { pname = "typenums"; - version = "0.1.2"; - sha256 = "1729iws0m6xr8y5aqcrxv4br1ihvly6fagkkgfp9kj71a5jzaw7l"; + version = "0.1.2.1"; + sha256 = "06wrsvbddv2ga7k39954697jnclb5r6g4m95pr0fmv34ws1y1d66"; libraryHaskellDepends = [ base ]; testHaskellDepends = [ base hspec QuickCheck ]; description = "Type level numbers using existing Nat functionality"; @@ -216799,7 +218149,7 @@ self: { license = stdenv.lib.licenses.mit; }) {}; - "universum_1_4_0" = callPackage + "universum_1_5_0" = callPackage ({ mkDerivation, base, bytestring, containers, deepseq, doctest , gauge, ghc-prim, Glob, hashable, hedgehog, microlens , microlens-mtl, mtl, safe-exceptions, stm, tasty, tasty-hedgehog @@ -216807,8 +218157,8 @@ self: { }: mkDerivation { pname = "universum"; - version = "1.4.0"; - sha256 = "1qhpz4wlvhrdjb1pvs0lgm0pghrciqasb3378zw32lqh3pv2pnrk"; + version = "1.5.0"; + sha256 = "17rzi17k2wj3p6dzd0dggzgyhh0c2mma4znkci1hqcihwr6rrljk"; libraryHaskellDepends = [ base bytestring containers deepseq ghc-prim hashable microlens microlens-mtl mtl safe-exceptions stm text transformers @@ -217661,8 +219011,8 @@ self: { ({ mkDerivation, aeson, base, bytestring, text, uri-bytestring }: mkDerivation { pname = "uri-bytestring-aeson"; - version = "0.1.0.6"; - sha256 = "02pgzkgmcam06qy1lqbmmjbah95b08hl5d5q61smmx78f83mzgfq"; + version = "0.1.0.7"; + sha256 = "16zg0fsxzdii72119jyhn2g2gy7j6pk7r8i7w5hk9a353kmvb43y"; libraryHaskellDepends = [ aeson base bytestring text uri-bytestring ]; @@ -217922,7 +219272,7 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; - "urlpath_9_0_0_1" = callPackage + "urlpath_9_0_1" = callPackage ({ mkDerivation, attoparsec-uri, base, exceptions, mmorph , monad-control, monad-control-aligned, monad-logger, mtl, path , path-extra, resourcet, split, strict, text, transformers @@ -217930,8 +219280,8 @@ self: { }: mkDerivation { pname = "urlpath"; - version = "9.0.0.1"; - sha256 = "009836gw2gmmjb08nqqdklpr967gfnnnk1r5lpy3wjyspky03vgv"; + version = "9.0.1"; + sha256 = "0acflpvb0imf2qc2gqbqziv4lk6a5p9gxkvbm0mv3kszqslh7rrg"; libraryHaskellDepends = [ attoparsec-uri base exceptions mmorph monad-control monad-control-aligned monad-logger mtl path path-extra resourcet @@ -219723,17 +221073,17 @@ self: { }) {}; "vector-binary-instances" = callPackage - ({ mkDerivation, base, binary, bytestring, criterion, deepseq - , tasty, tasty-quickcheck, vector + ({ mkDerivation, base, binary, bytestring, deepseq, gauge, tasty + , tasty-quickcheck, vector }: mkDerivation { pname = "vector-binary-instances"; - version = "0.2.5"; - sha256 = "0l9zj58a4sbpic1dc9if7iwv4rihya2bj4zb4qfna5fb3pf6plwc"; + version = "0.2.5.1"; + sha256 = "04n5cqm1v95pw1bp68l9drjkxqiy2vswxdq0fy1rqcgxisgvji9r"; libraryHaskellDepends = [ base binary vector ]; testHaskellDepends = [ base binary tasty tasty-quickcheck vector ]; benchmarkHaskellDepends = [ - base binary bytestring criterion deepseq vector + base binary bytestring deepseq gauge vector ]; description = "Instances of Data.Binary for vector"; license = stdenv.lib.licenses.bsd3; @@ -220977,25 +222327,27 @@ self: { "voicebase" = callPackage ({ mkDerivation, aeson, base, bytestring, filepath, HsOpenSSL - , http-client, http-client-openssl, json-autotype, lens, mime-types - , optparse-applicative, text, wreq + , hspec, http-client, http-client-openssl, lens, lens-aeson + , mime-types, mtl, optparse-applicative, roundtrip, roundtrip-aeson + , text, wreq }: mkDerivation { pname = "voicebase"; - version = "0.1.1.4"; - sha256 = "17yrdrvvd3kyd6qnkfhqdwjxc5ripmzwa056rvn38ny3cxcfkd78"; + version = "0.2.0.0"; + sha256 = "0ih0z27vz7767gr11lz227vb84i2kwc6wn9z1yd0zma5nj8x73hw"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ aeson base bytestring HsOpenSSL http-client http-client-openssl - json-autotype lens mime-types text wreq + lens lens-aeson mime-types mtl roundtrip roundtrip-aeson text wreq ]; executableHaskellDepends = [ aeson base bytestring filepath mime-types optparse-applicative text ]; - testHaskellDepends = [ aeson base ]; + testHaskellDepends = [ aeson base hspec roundtrip-aeson ]; description = "Upload audio files to voicebase to get a transcription"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "void" = callPackage @@ -221152,7 +222504,7 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; - "vty_5_25" = callPackage + "vty_5_25_1" = callPackage ({ mkDerivation, base, blaze-builder, bytestring, Cabal, containers , deepseq, directory, filepath, hashable, HUnit, microlens , microlens-mtl, microlens-th, mtl, parallel, parsec, QuickCheck @@ -221163,8 +222515,8 @@ self: { }: mkDerivation { pname = "vty"; - version = "5.25"; - sha256 = "1m37q8l4ynnhyln1hkwxrmgysslb5d6nvnvx667q4q004dhrcr91"; + version = "5.25.1"; + sha256 = "1x15jlf9x6c8nhdbp6alr17vigclkaf5qy5jpp14g5n568p7karw"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ @@ -221279,6 +222631,39 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "waargonaut" = callPackage + ({ mkDerivation, attoparsec, base, bifunctors, bytestring, Cabal + , cabal-doctest, containers, contravariant, digit, directory + , distributive, doctest, errors, filepath, generics-sop, hedgehog + , hoist-error, hw-balancedparens, hw-bits, hw-json, hw-prim + , hw-rankselect, lens, mmorph, mtl, nats, parsers, scientific + , semigroups, tagged, tasty, tasty-expected-failure, tasty-hedgehog + , tasty-hunit, template-haskell, text, transformers, vector + , witherable, wl-pprint-annotated, zippers + }: + mkDerivation { + pname = "waargonaut"; + version = "0.1.0.0"; + sha256 = "0y3h1kgh7n639h714ji4fycj6b8vcsa79jfv36w995p9gbjxxdjc"; + setupHaskellDepends = [ base Cabal cabal-doctest ]; + libraryHaskellDepends = [ + base bifunctors bytestring containers contravariant digit + distributive errors generics-sop hoist-error hw-balancedparens + hw-bits hw-json hw-prim hw-rankselect lens mmorph mtl nats parsers + scientific semigroups tagged text transformers vector witherable + wl-pprint-annotated zippers + ]; + testHaskellDepends = [ + attoparsec base bytestring digit directory distributive doctest + filepath generics-sop hedgehog lens scientific semigroups tagged + tasty tasty-expected-failure tasty-hedgehog tasty-hunit + template-haskell text vector zippers + ]; + description = "JSON wrangling"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "wacom-daemon" = callPackage ({ mkDerivation, aeson, base, bytestring, containers, directory , filepath, Glob, libnotify, process, select, text, udev @@ -223807,6 +225192,40 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "web3_0_8_1_0" = callPackage + ({ mkDerivation, aeson, async, base, basement, bytestring, cereal + , cryptonite, data-default, exceptions, generics-sop, hspec + , hspec-contrib, hspec-discover, hspec-expectations, http-client + , http-client-tls, machines, memory, microlens, microlens-aeson + , microlens-mtl, microlens-th, mtl, OneTuple, parsec, random + , relapse, secp256k1-haskell, split, stm, tagged, template-haskell + , text, time, transformers, vinyl + }: + mkDerivation { + pname = "web3"; + version = "0.8.1.0"; + sha256 = "0aliq3iblnlz7waswzprb8z28v82sjq8qpc2bbcyknmpp52p2r26"; + libraryHaskellDepends = [ + aeson async base basement bytestring cereal cryptonite data-default + exceptions generics-sop http-client http-client-tls machines memory + microlens microlens-aeson microlens-mtl microlens-th mtl OneTuple + parsec relapse secp256k1-haskell tagged template-haskell text + transformers vinyl + ]; + testHaskellDepends = [ + aeson async base basement bytestring cereal cryptonite data-default + exceptions generics-sop hspec hspec-contrib hspec-discover + hspec-expectations http-client http-client-tls machines memory + microlens microlens-aeson microlens-mtl microlens-th mtl OneTuple + parsec random relapse secp256k1-haskell split stm tagged + template-haskell text time transformers vinyl + ]; + testToolDepends = [ hspec-discover ]; + description = "Ethereum API for Haskell"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "webapi" = callPackage ({ mkDerivation, aeson, base, binary, blaze-builder, bytestring , bytestring-lexing, bytestring-trie, case-insensitive, containers @@ -224934,14 +226353,12 @@ self: { ({ mkDerivation, base, bytestring, deepseq, dnsapi }: mkDerivation { pname = "windns"; - version = "0.1.0.0"; - sha256 = "1hphwmwc1182p5aqjswcgqjbilm91rv5svjqhd93cqq599gg8q0c"; - revision = "3"; - editedCabalFile = "0j6gqyvhv7hxm5n249nrv0d9r41qb0yc4qdrzkjgs6lchndi6mrp"; + version = "0.1.0.1"; + sha256 = "016d1cf51jqvhbzlf5kbizv4l4dymradac1420rl47q2k5faczq8"; libraryHaskellDepends = [ base bytestring deepseq ]; librarySystemDepends = [ dnsapi ]; - description = "Domain Name Service (DNS) lookup via the Windows dnsapi standard library"; - license = stdenv.lib.licenses.gpl3; + description = "Domain Name Service (DNS) lookup via the <windns.h>/dnsapi.dll standard library"; + license = stdenv.lib.licenses.gpl2; hydraPlatforms = stdenv.lib.platforms.none; }) {dnsapi = null;}; @@ -225194,6 +226611,7 @@ self: { executableHaskellDepends = [ base bytestring network unix ]; description = "A network server to show bottlenecks of GHC"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "wizard" = callPackage @@ -226126,6 +227544,21 @@ self: { license = stdenv.lib.licenses.bsd3; }) {}; + "writer-cps-exceptions" = callPackage + ({ mkDerivation, base, exceptions, transformers + , writer-cps-transformers + }: + mkDerivation { + pname = "writer-cps-exceptions"; + version = "0.1.0.0"; + sha256 = "1s44h5d0f847w3j65frvjq2g6khz2ipsch109qnq5h2vcbgxid4v"; + libraryHaskellDepends = [ + base exceptions transformers writer-cps-transformers + ]; + description = "Control.Monad.Catch instances for the stricter CPS WriterT and RWST"; + license = stdenv.lib.licenses.bsd3; + }) {}; + "writer-cps-full" = callPackage ({ mkDerivation, base, writer-cps-lens, writer-cps-morph , writer-cps-mtl, writer-cps-transformers @@ -226248,6 +227681,31 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "ws_0_0_5" = callPackage + ({ mkDerivation, async, attoparsec, attoparsec-uri, base + , bytestring, exceptions, haskeline, mtl, network + , optparse-applicative, strict, text, vector, websockets, wuss + }: + mkDerivation { + pname = "ws"; + version = "0.0.5"; + sha256 = "1qj4yq2z7ml88jgcqfy8i1cn1cbmdv56vg7v6b2inh4b4h41yax6"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ + async attoparsec-uri base bytestring exceptions haskeline mtl + network text websockets wuss + ]; + executableHaskellDepends = [ + async attoparsec attoparsec-uri base bytestring exceptions + haskeline mtl network optparse-applicative strict text vector + websockets wuss + ]; + description = "A simple CLI utility for interacting with a websocket"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "ws-chans" = callPackage ({ mkDerivation, async, base, http-types, HUnit, network , QuickCheck, quickcheck-instances, test-framework @@ -226708,10 +228166,8 @@ self: { }: mkDerivation { pname = "x509"; - version = "1.7.4"; - sha256 = "1vm1ir0q7nxcyq65bmw7hbwlmf3frya077v9jikcrh8igg18m717"; - revision = "1"; - editedCabalFile = "0p9zzzj118n8ymacj6yp7nkf22d09mj31wnzc1alq26w2ybcrifz"; + version = "1.7.5"; + sha256 = "1j67c35g8334jx7x32hh6awhr43dplp0qwal5gnlkmx09axzrc5i"; libraryHaskellDepends = [ asn1-encoding asn1-parse asn1-types base bytestring containers cryptonite hourglass memory mtl pem @@ -226731,8 +228187,8 @@ self: { }: mkDerivation { pname = "x509-store"; - version = "1.6.6"; - sha256 = "0dbndqmnmyixxc7308nyq3zlkhz9dff4rbcw2a49c77rbicny9va"; + version = "1.6.7"; + sha256 = "1y8yyr1i95jkllg8k0z54k5v4vachp848clc07m33xpxidn3b1lp"; libraryHaskellDepends = [ asn1-encoding asn1-types base bytestring containers cryptonite directory filepath mtl pem x509 @@ -226760,21 +228216,22 @@ self: { "x509-util" = callPackage ({ mkDerivation, asn1-encoding, asn1-types, base, bytestring - , cryptonite, directory, hourglass, pem, x509, x509-store + , cryptonite, directory, hourglass, memory, pem, x509, x509-store , x509-system, x509-validation }: mkDerivation { pname = "x509-util"; - version = "1.6.4"; - sha256 = "0qv33r1p1mdl8yskl0hzy3s989y929lk2q23i9qb9fb6w63g6nfb"; + version = "1.6.5"; + sha256 = "1d8s1aaymc0bim871cblv1jpy6vnkadxz4spd7wpr90vswkd2hl7"; isLibrary = false; isExecutable = true; executableHaskellDepends = [ asn1-encoding asn1-types base bytestring cryptonite directory - hourglass pem x509 x509-store x509-system x509-validation + hourglass memory pem x509 x509-store x509-system x509-validation ]; description = "Utility for X509 certificate and chain"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "x509-validation" = callPackage @@ -226784,17 +228241,16 @@ self: { }: mkDerivation { pname = "x509-validation"; - version = "1.6.10"; - sha256 = "1ms51scawldgyfcim5a2qlgyn3rnrclyh205d6djaa1569vrs73n"; - revision = "1"; - editedCabalFile = "1isap8v1gh31q4pj3gn155ya8nd1da0a5a3cryqh4yhf0ivbwl0w"; + version = "1.6.11"; + sha256 = "16yihzljql3z8w5rgdl95fv3hgk7yd86kbl9b3glllsark5j2hzr"; libraryHaskellDepends = [ asn1-encoding asn1-types base bytestring containers cryptonite data-default-class hourglass memory mtl pem x509 x509-store ]; testHaskellDepends = [ asn1-encoding asn1-types base bytestring cryptonite - data-default-class hourglass tasty tasty-hunit x509 x509-store + data-default-class hourglass memory tasty tasty-hunit x509 + x509-store ]; description = "X.509 Certificate and CRL validation"; license = stdenv.lib.licenses.bsd3; @@ -228120,8 +229576,8 @@ self: { pname = "xmlhtml"; version = "0.2.5.2"; sha256 = "1p2v1cj9jjwbqyb0fyv2201zd7ljz5d46qg5kwy7rz2bchbqd0b4"; - revision = "1"; - editedCabalFile = "15lvbvdcagnqr62wfs3zz9xlcv553jr4ixbl50fsaxhkvlnymk45"; + revision = "2"; + editedCabalFile = "1d7q7acdv72zbbqq2n0swf3ia3lz1zplni6q5r97sp2w1a3xm6hf"; libraryHaskellDepends = [ base blaze-builder blaze-html blaze-markup bytestring bytestring-builder containers parsec text unordered-containers @@ -228465,6 +229921,8 @@ self: { pname = "xmonad-wallpaper"; version = "0.0.1.4"; sha256 = "0f6214kqp86xnk1zginjiprnqlj2fzcvh3w5sv3yvqg98mwdd0cg"; + revision = "1"; + editedCabalFile = "1vxgv702wgr0k0kzd602v8xv11q5dap4mfhqifnr928bwf9scp28"; libraryHaskellDepends = [ base magic mtl random unix xmonad ]; description = "xmonad wallpaper extension"; license = stdenv.lib.licenses.lgpl3; @@ -229405,15 +230863,14 @@ self: { ({ mkDerivation, base, blank-canvas, stm, time, Yampa }: mkDerivation { pname = "yampa-canvas"; - version = "0.2.2"; - sha256 = "0g1yvb6snnsbvy2f74lrlqff5zgnvfh2f6r8xdwxi61dk71qsz0n"; - revision = "7"; - editedCabalFile = "1bj5ncrkwjpvjvrx0s23ksvwwsrybj7zl3sghl1d034wd9r89mxx"; + version = "0.2.3"; + sha256 = "0a1pq1psmc4490isr19z4prnqq1w3374vkfmzpw9s20s2p6k5y7r"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ base blank-canvas stm time Yampa ]; description = "blank-canvas frontend for Yampa"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "yampa-glfw" = callPackage @@ -229434,6 +230891,20 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "yampa-gloss" = callPackage + ({ mkDerivation, base, gloss, Yampa }: + mkDerivation { + pname = "yampa-gloss"; + version = "0.1.0.0"; + sha256 = "1h9x76swrq64add2v6935542gh5l5rpf5nqdy1nl2q78ksk6r04g"; + isLibrary = true; + isExecutable = true; + libraryHaskellDepends = [ base gloss Yampa ]; + description = "A GLOSS backend for Yampa"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "yampa-glut" = callPackage ({ mkDerivation, base, GLUT, newtype, OpenGL, vector-space , Yampa-core @@ -229477,8 +230948,8 @@ self: { }: mkDerivation { pname = "yampa-test"; - version = "0.1.0.0"; - sha256 = "1d69qa8dzwsj6pawlg88vwv1r2ig2vnx11zbaq0pbl5hczfnknpd"; + version = "0.1.1"; + sha256 = "1qc1aic4apml5akq056i5c460x12hf613r1zkisshjm0na4gx5mb"; libraryHaskellDepends = [ base normaldistribution QuickCheck Yampa ]; @@ -229487,6 +230958,7 @@ self: { ]; description = "Testing library for Yampa"; license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; }) {}; "yampa2048" = callPackage @@ -231450,6 +232922,23 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "yesod-recaptcha2_0_3_0" = callPackage + ({ mkDerivation, aeson, base, classy-prelude, http-conduit + , yesod-auth, yesod-core, yesod-form + }: + mkDerivation { + pname = "yesod-recaptcha2"; + version = "0.3.0"; + sha256 = "12bgj16vfmvk6ri55wmx444njhlmf11v4cins8c1a6isjk8alhhc"; + libraryHaskellDepends = [ + aeson base classy-prelude http-conduit yesod-auth yesod-core + yesod-form + ]; + description = "yesod recaptcha2"; + license = stdenv.lib.licenses.mit; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "yesod-routes" = callPackage ({ mkDerivation, base, bytestring, containers, hspec, HUnit , path-pieces, template-haskell, text, vector @@ -232541,6 +234030,18 @@ self: { hydraPlatforms = stdenv.lib.platforms.none; }) {}; + "yoda" = callPackage + ({ mkDerivation, base }: + mkDerivation { + pname = "yoda"; + version = "0.1.3.0"; + sha256 = "0qkg8aykr8whjrkwfnsds3bjbrb51r83rd60mpdwcs12zyqlpi0d"; + libraryHaskellDepends = [ base ]; + description = "Parser combinators for young padawans"; + license = stdenv.lib.licenses.bsd3; + hydraPlatforms = stdenv.lib.platforms.none; + }) {}; + "yoga" = callPackage ({ mkDerivation, base, bindings-DSL, ieee754 }: mkDerivation { @@ -232970,8 +234471,8 @@ self: { }: mkDerivation { pname = "zephyr"; - version = "0.2.0"; - sha256 = "0n0z7s71gjlpra4ghfd51rcz5yqddzzwfdpjnhlxciakrabc5m3f"; + version = "0.2.1"; + sha256 = "0yhpy1dwh1axbh3xgxn97vnh616pywz56r7gy6sfvqaxj9bqviha"; isLibrary = true; isExecutable = true; libraryHaskellDepends = [ diff --git a/pkgs/development/haskell-modules/lib.nix b/pkgs/development/haskell-modules/lib.nix index f4ebe549c502..942163ea2096 100644 --- a/pkgs/development/haskell-modules/lib.nix +++ b/pkgs/development/haskell-modules/lib.nix @@ -354,4 +354,19 @@ rec { in builtins.listToAttrs (map toKeyVal haskellPaths); + + # Modify a Haskell package to add completion scripts for the given executable + # produced by it. These completion scripts will be picked up automatically if + # the resulting derivation is installed, e.g. by `nix-env -i`. + addOptparseApplicativeCompletionScripts = exeName: pkg: overrideCabal pkg (drv: { + postInstall = (drv.postInstall or "") + '' + bashCompDir="$out/share/bash-completion/completions" + zshCompDir="$out/share/zsh/vendor-completions" + fishCompDir="$out/share/fish/vendor_completions.d" + mkdir -p "$bashCompDir" "$zshCompDir" "$fishCompDir" + "$out/bin/${exeName}" --bash-completion-script "$out/bin/${exeName}" >"$bashCompDir/${exeName}" + "$out/bin/${exeName}" --zsh-completion-script "$out/bin/${exeName}" >"$zshCompDir/_${exeName}" + "$out/bin/${exeName}" --fish-completion-script "$out/bin/${exeName}" >"$fishCompDir/${exeName}.fish" + ''; + }); } diff --git a/pkgs/development/interpreters/hy/default.nix b/pkgs/development/interpreters/hy/default.nix index 3f08ca8f7c22..02ce07bdf471 100644 --- a/pkgs/development/interpreters/hy/default.nix +++ b/pkgs/development/interpreters/hy/default.nix @@ -2,20 +2,20 @@ pythonPackages.buildPythonApplication rec { name = "hy-${version}"; - version = "0.14.0"; + version = "0.15.0"; src = fetchurl { url = "mirror://pypi/h/hy/${name}.tar.gz"; - sha256 = "0cbdh1q0zm00p4h7i44kir4qhw0p6sid78xf6llrx2p21llsnv98"; + sha256 = "01vzaib1imr00j5d7f7xk44v800h06s3yv9inhlqm6f3b25ywpl1"; }; - propagatedBuildInputs = with pythonPackages; [ appdirs clint astor rply ]; - - # The build generates a .json parser file in the home directory under .cache. - # This is needed to get it to not try and open files in /homeless-shelter - preConfigure = '' - export HOME=$TMP - ''; + propagatedBuildInputs = with pythonPackages; [ + appdirs + astor + clint + funcparserlib + rply + ]; meta = { description = "A LISP dialect embedded in Python"; diff --git a/pkgs/development/interpreters/perl/default.nix b/pkgs/development/interpreters/perl/default.nix index 42cc2a518d62..8d21d92ef430 100644 --- a/pkgs/development/interpreters/perl/default.nix +++ b/pkgs/development/interpreters/perl/default.nix @@ -186,7 +186,7 @@ in rec { # the latest Devel version perldevel = common { - version = "5.29.3"; - sha256 = "054xi629408p2hv9475jghv6zd1bj69qqpiby8cy9qw5vismgi17"; + version = "5.29.4"; + sha256 = "153r0f6jdqrl7hxrvhfivf5g8ivhbvggfhg841q3hi3db5rc86k4"; }; } diff --git a/pkgs/development/interpreters/python/cpython/3.4/default.nix b/pkgs/development/interpreters/python/cpython/3.4/default.nix deleted file mode 100644 index 18b90cd1da46..000000000000 --- a/pkgs/development/interpreters/python/cpython/3.4/default.nix +++ /dev/null @@ -1,214 +0,0 @@ -{ stdenv, fetchurl, fetchpatch -, bzip2 -, expat -, libffi -, gdbm -, lzma -, ncurses -, openssl -, readline -, sqlite -, tcl ? null, tk ? null, tix ? null, libX11 ? null, xproto ? null, x11Support ? false -, zlib -, callPackage -, self -, CF, configd -, python-setup-hook -# For the Python package set -, packageOverrides ? (self: super: {}) -}: - -assert x11Support -> tcl != null - && tk != null - && xproto != null - && libX11 != null; - -with stdenv.lib; - -let - majorVersion = "3.4"; - minorVersion = "9"; - minorVersionSuffix = ""; - version = "${majorVersion}.${minorVersion}${minorVersionSuffix}"; - libPrefix = "python${majorVersion}"; - sitePackages = "lib/${libPrefix}/site-packages"; - - buildInputs = filter (p: p != null) [ - zlib bzip2 expat lzma libffi gdbm sqlite readline ncurses openssl ] - ++ optionals x11Support [ tcl tk libX11 xproto ] - ++ optionals stdenv.isDarwin [ CF configd ]; - - hasDistutilsCxxPatch = !(stdenv.cc.isGNU or false); - -in stdenv.mkDerivation { - name = "python3-${version}"; - pythonVersion = majorVersion; - inherit majorVersion version; - - inherit buildInputs; - - src = fetchurl { - url = "http://www.python.org/ftp/python/${version}/Python-${version}.tar.xz"; - sha256 = "1n9b1kavmw8b7rc3gkrka4fjzrbfq9iqy791yncaf09bp9v9cqjr"; - }; - - NIX_LDFLAGS = optionalString stdenv.isLinux "-lgcc_s"; - - # Determinism: The interpreter is patched to write null timestamps when compiling python files. - # This way python doesn't try to update them when we freeze timestamps in nix store. - DETERMINISTIC_BUILD=1; - # Determinism: We fix the hashes of str, bytes and datetime objects. - PYTHONHASHSEED=0; - - prePatch = optionalString stdenv.isDarwin '' - substituteInPlace configure --replace '`/usr/bin/arch`' '"i386"' - substituteInPlace configure --replace '-Wl,-stack_size,1000000' ' ' - ''; - - patches = [ - ./no-ldconfig.patch - ./ld_library_path.patch - ] ++ optionals (x11Support && stdenv.isDarwin) [ - ./use-correct-tcl-tk-on-darwin.patch - ] ++ optionals hasDistutilsCxxPatch [ - # Fix for http://bugs.python.org/issue1222585 - # Upstream distutils is calling C compiler to compile C++ code, which - # only works for GCC and Apple Clang. This makes distutils to call C++ - # compiler when needed. - (fetchpatch { - url = "https://bugs.python.org/file47046/python-3.x-distutils-C++.patch"; - sha256 = "0dgdn9k2kmw4wh90vdnjcrnn97ylxgx7mbn9l87fwz6j501jqvk8"; - extraPrefix = ""; - }) - ]; - - postPatch = '' - # Determinism - substituteInPlace "Lib/py_compile.py" --replace "source_stats['mtime']" "(1 if 'DETERMINISTIC_BUILD' in os.environ else source_stats['mtime'])" - # Determinism. This is done unconditionally - substituteInPlace "Lib/importlib/_bootstrap.py" --replace "source_mtime = int(source_stats['mtime'])" "source_mtime = 1" - '' + optionalString (x11Support && (tix != null)) '' - substituteInPlace "Lib/tkinter/tix.py" --replace "os.environ.get('TIX_LIBRARY')" "os.environ.get('TIX_LIBRARY') or '${tix}/lib'" - '' - # Avoid picking up getentropy() from glibc >= 2.25, as that would break - # on older kernels. http://bugs.python.org/issue29157 - + optionalString stdenv.isLinux '' - substituteInPlace Python/random.c --replace 'defined(HAVE_GETENTROPY)' '0' - cat Python/random.c - ''; - - CPPFLAGS="${concatStringsSep " " (map (p: "-I${getDev p}/include") buildInputs)}"; - LDFLAGS="${concatStringsSep " " (map (p: "-L${getLib p}/lib") buildInputs)}"; - LIBS="${optionalString (!stdenv.isDarwin) "-lcrypt"} ${optionalString (ncurses != null) "-lncurses"}"; - - configureFlags = [ - "--enable-shared" - "--with-threads" - "--without-ensurepip" - "--with-system-expat" - "--with-system-ffi" - ] - # Never even try to use lchmod on linux, - # don't rely on detecting glibc-isms. - ++ optional stdenv.hostPlatform.isLinux "ac_cv_func_lchmod=no"; - - preConfigure = '' - for i in /usr /sw /opt /pkg; do # improve purity - substituteInPlace ./setup.py --replace $i /no-such-path - done - ${optionalString stdenv.isDarwin '' - export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -msse2" - export MACOSX_DEPLOYMENT_TARGET=10.6 - '' - + optionalString stdenv.hostPlatform.isMusl '' - export NIX_CFLAGS_COMPILE+=" -DTHREAD_STACK_SIZE=0x100000" - ''} - ''; - - setupHook = python-setup-hook sitePackages; - - postInstall = '' - # needed for some packages, especially packages that backport functionality - # to 2.x from 3.x - for item in $out/lib/python${majorVersion}/test/*; do - if [[ "$item" != */test_support.py* - && "$item" != */test/support - && "$item" != */test/libregrtest - && "$item" != */test/regrtest.py* ]]; then - rm -rf "$item" - else - echo $item - fi - done - touch $out/lib/python${majorVersion}/test/__init__.py - - ln -s "$out/include/python${majorVersion}m" "$out/include/python${majorVersion}" - paxmark E $out/bin/python${majorVersion} - - # Python on Nix is not manylinux1 compatible. https://github.com/NixOS/nixpkgs/issues/18484 - echo "manylinux1_compatible=False" >> $out/lib/${libPrefix}/_manylinux.py - - # Determinism: Windows installers were not deterministic. - # We're also not interested in building Windows installers. - find "$out" -name 'wininst*.exe' | xargs -r rm -f - - # Use Python3 as default python - ln -s "$out/bin/idle3" "$out/bin/idle" - ln -s "$out/bin/pydoc3" "$out/bin/pydoc" - ln -s "$out/bin/python3" "$out/bin/python" - ln -s "$out/bin/python3-config" "$out/bin/python-config" - ln -s "$out/lib/pkgconfig/python3.pc" "$out/lib/pkgconfig/python.pc" - - # Get rid of retained dependencies on -dev packages, and remove - # some $TMPDIR references to improve binary reproducibility. - # Note that the .pyc file of _sysconfigdata.py should be regenerated! - for i in $out/lib/python${majorVersion}/_sysconfigdata.py $out/lib/python${majorVersion}/config-${majorVersion}m/Makefile; do - sed -i $i -e "s|-I/nix/store/[^ ']*||g" -e "s|-L/nix/store/[^ ']*||g" -e "s|$TMPDIR|/no-such-path|g" - done - - # Determinism: rebuild all bytecode - # We exclude lib2to3 because that's Python 2 code which fails - # We rebuild three times, once for each optimization level - find $out -name "*.py" | $out/bin/python -m compileall -q -f -x "lib2to3" -i - - find $out -name "*.py" | $out/bin/python -O -m compileall -q -f -x "lib2to3" -i - - find $out -name "*.py" | $out/bin/python -OO -m compileall -q -f -x "lib2to3" -i - - ''; - - passthru = let - pythonPackages = callPackage ../../../../../top-level/python-packages.nix { - python = self; - overrides = packageOverrides; - }; - in rec { - inherit libPrefix sitePackages x11Support hasDistutilsCxxPatch; - executable = "${libPrefix}m"; - buildEnv = callPackage ../../wrapper.nix { python = self; inherit (pythonPackages) requiredPythonModules; }; - withPackages = import ../../with-packages.nix { inherit buildEnv pythonPackages;}; - pkgs = pythonPackages; - isPy3 = true; - isPy34 = true; - is_py3k = true; # deprecated - interpreter = "${self}/bin/${executable}"; - }; - - enableParallelBuilding = true; - - doCheck = false; # expensive, and fails - - meta = { - homepage = http://python.org; - description = "A high-level dynamically-typed programming language"; - longDescription = '' - Python is a remarkably powerful dynamic programming language that - is used in a wide variety of application domains. Some of its key - distinguishing features include: clear, readable syntax; strong - introspection capabilities; intuitive object orientation; natural - expression of procedural code; full modularity, supporting - hierarchical packages; exception-based error handling; and very - high level dynamic data types. - ''; - license = licenses.psfl; - platforms = with platforms; linux ++ darwin; - maintainers = with maintainers; [ fridh ]; - }; -} diff --git a/pkgs/development/interpreters/python/cpython/3.4/ld_library_path.patch b/pkgs/development/interpreters/python/cpython/3.4/ld_library_path.patch deleted file mode 100644 index 3172eb6d18e4..000000000000 --- a/pkgs/development/interpreters/python/cpython/3.4/ld_library_path.patch +++ /dev/null @@ -1,51 +0,0 @@ -From 85991e0d7f0e631240f3f6233bd65d1128a66dec Mon Sep 17 00:00:00 2001 -From: Frederik Rietdijk <fridh@fridh.nl> -Date: Thu, 14 Sep 2017 10:00:31 +0200 -Subject: [PATCH] ctypes.util: support LD_LIBRARY_PATH - -Backports support for LD_LIBRARY_PATH from 3.6 ---- - Lib/ctypes/util.py | 26 +++++++++++++++++++++++++- - 1 file changed, 25 insertions(+), 1 deletion(-) - -diff --git a/Lib/ctypes/util.py b/Lib/ctypes/util.py -index 780cd5d21b..d7ac15070f 100644 ---- a/Lib/ctypes/util.py -+++ b/Lib/ctypes/util.py -@@ -181,8 +181,32 @@ elif os.name == "posix": - def _findSoname_ldconfig(name): - return None - -+ def _findLib_ld(name): -+ # See issue #9998 for why this is needed -+ expr = r'[^\(\)\s]*lib%s\.[^\(\)\s]*' % re.escape(name) -+ cmd = ['ld', '-t'] -+ libpath = os.environ.get('LD_LIBRARY_PATH') -+ if libpath: -+ for d in libpath.split(':'): -+ cmd.extend(['-L', d]) -+ cmd.extend(['-o', os.devnull, '-l%s' % name]) -+ result = None -+ try: -+ p = subprocess.Popen(cmd, stdout=subprocess.PIPE, -+ stderr=subprocess.PIPE, -+ universal_newlines=True) -+ out, _ = p.communicate() -+ res = re.search(expr, os.fsdecode(out)) -+ if res: -+ result = res.group(0) -+ except Exception as e: -+ pass # result will be None -+ return result -+ - def find_library(name): -- return _findSoname_ldconfig(name) or _get_soname(_findLib_gcc(name)) -+ # See issue #9998 -+ return _findSoname_ldconfig(name) or \ -+ _get_soname(_findLib_gcc(name) or _findLib_ld(name)) - - ################################################################ - # test code --- -2.14.1 - diff --git a/pkgs/development/interpreters/python/cpython/3.4/no-ldconfig.patch b/pkgs/development/interpreters/python/cpython/3.4/no-ldconfig.patch deleted file mode 100644 index 3cb77a107254..000000000000 --- a/pkgs/development/interpreters/python/cpython/3.4/no-ldconfig.patch +++ /dev/null @@ -1,147 +0,0 @@ -From 81bd99ad9058feb1d0361bc8862e8567c21a6142 Mon Sep 17 00:00:00 2001 -From: Frederik Rietdijk <fridh@fridh.nl> -Date: Mon, 28 Aug 2017 09:24:06 +0200 -Subject: [PATCH] Don't use ldconfig and speed up uuid load - ---- - Lib/ctypes/util.py | 52 ++-------------------------------------------------- - Lib/uuid.py | 50 ++------------------------------------------------ - 2 files changed, 4 insertions(+), 98 deletions(-) - -diff --git a/Lib/ctypes/util.py b/Lib/ctypes/util.py -index 595113bffd..780cd5d21b 100644 ---- a/Lib/ctypes/util.py -+++ b/Lib/ctypes/util.py -@@ -88,28 +88,7 @@ elif os.name == "posix": - import re, tempfile - - def _findLib_gcc(name): -- expr = r'[^\(\)\s]*lib%s\.[^\(\)\s]*' % re.escape(name) -- fdout, ccout = tempfile.mkstemp() -- os.close(fdout) -- cmd = 'if type gcc >/dev/null 2>&1; then CC=gcc; elif type cc >/dev/null 2>&1; then CC=cc;else exit 10; fi;' \ -- 'LANG=C LC_ALL=C $CC -Wl,-t -o ' + ccout + ' 2>&1 -l' + name -- try: -- f = os.popen(cmd) -- try: -- trace = f.read() -- finally: -- rv = f.close() -- finally: -- try: -- os.unlink(ccout) -- except FileNotFoundError: -- pass -- if rv == 10: -- raise OSError('gcc or cc command not found') -- res = re.search(expr, trace) -- if not res: -- return None -- return res.group(0) -+ return None - - - if sys.platform == "sunos5": -@@ -200,34 +179,7 @@ elif os.name == "posix": - else: - - def _findSoname_ldconfig(name): -- import struct -- if struct.calcsize('l') == 4: -- machine = os.uname().machine + '-32' -- else: -- machine = os.uname().machine + '-64' -- mach_map = { -- 'x86_64-64': 'libc6,x86-64', -- 'ppc64-64': 'libc6,64bit', -- 'sparc64-64': 'libc6,64bit', -- 's390x-64': 'libc6,64bit', -- 'ia64-64': 'libc6,IA-64', -- } -- abi_type = mach_map.get(machine, 'libc6') -- -- # XXX assuming GLIBC's ldconfig (with option -p) -- regex = os.fsencode( -- '\s+(lib%s\.[^\s]+)\s+\(%s' % (re.escape(name), abi_type)) -- try: -- with subprocess.Popen(['/sbin/ldconfig', '-p'], -- stdin=subprocess.DEVNULL, -- stderr=subprocess.DEVNULL, -- stdout=subprocess.PIPE, -- env={'LC_ALL': 'C', 'LANG': 'C'}) as p: -- res = re.search(regex, p.stdout.read()) -- if res: -- return os.fsdecode(res.group(1)) -- except OSError: -- pass -+ return None - - def find_library(name): - return _findSoname_ldconfig(name) or _get_soname(_findLib_gcc(name)) -diff --git a/Lib/uuid.py b/Lib/uuid.py -index 1061bffc43..846f5819f5 100644 ---- a/Lib/uuid.py -+++ b/Lib/uuid.py -@@ -451,57 +451,11 @@ def _netbios_getnode(): - return ((bytes[0]<<40) + (bytes[1]<<32) + (bytes[2]<<24) + - (bytes[3]<<16) + (bytes[4]<<8) + bytes[5]) - --# Thanks to Thomas Heller for ctypes and for his help with its use here. - --# If ctypes is available, use it to find system routines for UUID generation. --# XXX This makes the module non-thread-safe! - _uuid_generate_random = _uuid_generate_time = _UuidCreate = None --try: -- import ctypes, ctypes.util - -- # The uuid_generate_* routines are provided by libuuid on at least -- # Linux and FreeBSD, and provided by libc on Mac OS X. -- for libname in ['uuid', 'c']: -- try: -- lib = ctypes.CDLL(ctypes.util.find_library(libname)) -- except: -- continue -- if hasattr(lib, 'uuid_generate_random'): -- _uuid_generate_random = lib.uuid_generate_random -- if hasattr(lib, 'uuid_generate_time'): -- _uuid_generate_time = lib.uuid_generate_time -- if _uuid_generate_random is not None: -- break # found everything we were looking for -- -- # The uuid_generate_* functions are broken on MacOS X 10.5, as noted -- # in issue #8621 the function generates the same sequence of values -- # in the parent process and all children created using fork (unless -- # those children use exec as well). -- # -- # Assume that the uuid_generate functions are broken from 10.5 onward, -- # the test can be adjusted when a later version is fixed. -- import sys -- if sys.platform == 'darwin': -- import os -- if int(os.uname().release.split('.')[0]) >= 9: -- _uuid_generate_random = _uuid_generate_time = None -- -- # On Windows prior to 2000, UuidCreate gives a UUID containing the -- # hardware address. On Windows 2000 and later, UuidCreate makes a -- # random UUID and UuidCreateSequential gives a UUID containing the -- # hardware address. These routines are provided by the RPC runtime. -- # NOTE: at least on Tim's WinXP Pro SP2 desktop box, while the last -- # 6 bytes returned by UuidCreateSequential are fixed, they don't appear -- # to bear any relationship to the MAC address of any network device -- # on the box. -- try: -- lib = ctypes.windll.rpcrt4 -- except: -- lib = None -- _UuidCreate = getattr(lib, 'UuidCreateSequential', -- getattr(lib, 'UuidCreate', None)) --except: -- pass -+_uuid_generate_time = _UuidCreate = None -+ - - def _unixdll_getnode(): - """Get the hardware address on Unix using ctypes.""" --- -2.14.1 - diff --git a/pkgs/development/interpreters/python/cpython/3.4/use-correct-tcl-tk-on-darwin.patch b/pkgs/development/interpreters/python/cpython/3.4/use-correct-tcl-tk-on-darwin.patch deleted file mode 100644 index b73f62b97ec5..000000000000 --- a/pkgs/development/interpreters/python/cpython/3.4/use-correct-tcl-tk-on-darwin.patch +++ /dev/null @@ -1,48 +0,0 @@ -diff --git a/setup.py b/setup.py -index 2779658..902d0eb 100644 ---- a/setup.py -+++ b/setup.py -@@ -1699,9 +1699,6 @@ class PyBuildExt(build_ext): - # Rather than complicate the code below, detecting and building - # AquaTk is a separate method. Only one Tkinter will be built on - # Darwin - either AquaTk, if it is found, or X11 based Tk. -- if (host_platform == 'darwin' and -- self.detect_tkinter_darwin(inc_dirs, lib_dirs)): -- return - - # Assume we haven't found any of the libraries or include files - # The versions with dots are used on Unix, and the versions without -@@ -1747,22 +1744,6 @@ class PyBuildExt(build_ext): - if dir not in include_dirs: - include_dirs.append(dir) - -- # Check for various platform-specific directories -- if host_platform == 'sunos5': -- include_dirs.append('/usr/openwin/include') -- added_lib_dirs.append('/usr/openwin/lib') -- elif os.path.exists('/usr/X11R6/include'): -- include_dirs.append('/usr/X11R6/include') -- added_lib_dirs.append('/usr/X11R6/lib64') -- added_lib_dirs.append('/usr/X11R6/lib') -- elif os.path.exists('/usr/X11R5/include'): -- include_dirs.append('/usr/X11R5/include') -- added_lib_dirs.append('/usr/X11R5/lib') -- else: -- # Assume default location for X11 -- include_dirs.append('/usr/X11/include') -- added_lib_dirs.append('/usr/X11/lib') -- - # If Cygwin, then verify that X is installed before proceeding - if host_platform == 'cygwin': - x11_inc = find_file('X11/Xlib.h', [], include_dirs) -@@ -1786,10 +1767,6 @@ class PyBuildExt(build_ext): - if host_platform in ['aix3', 'aix4']: - libs.append('ld') - -- # Finally, link with the X11 libraries (not appropriate on cygwin) -- if host_platform != "cygwin": -- libs.append('X11') -- - ext = Extension('_tkinter', ['_tkinter.c', 'tkappinit.c'], - define_macros=[('WITH_APPINIT', 1)] + defs, - include_dirs = include_dirs, diff --git a/pkgs/development/interpreters/racket/default.nix b/pkgs/development/interpreters/racket/default.nix index 1f2a28cb8fb8..ee7d9dd68136 100644 --- a/pkgs/development/interpreters/racket/default.nix +++ b/pkgs/development/interpreters/racket/default.nix @@ -36,7 +36,7 @@ in stdenv.mkDerivation rec { name = "racket-${version}"; - version = "7.0"; # always change at once with ./minimal.nix + version = "7.1"; # always change at once with ./minimal.nix src = (stdenv.lib.makeOverridable ({ name, sha256 }: fetchurl rec { @@ -45,7 +45,7 @@ stdenv.mkDerivation rec { } )) { inherit name; - sha256 = "1glv5amsp9xp480d4yr63hhm9kkyav06yl3a6p489nkr4cln0j9a"; + sha256 = "180z0z6srzyipi9wfnbh61nbvzxr5d1cls7wxapv6fw92y52jwz9"; }; FONTCONFIG_FILE = fontsConf; diff --git a/pkgs/development/interpreters/racket/minimal.nix b/pkgs/development/interpreters/racket/minimal.nix index ba4e94cbf13f..114023defcd4 100644 --- a/pkgs/development/interpreters/racket/minimal.nix +++ b/pkgs/development/interpreters/racket/minimal.nix @@ -5,7 +5,7 @@ racket.overrideAttrs (oldAttrs: rec { name = "racket-minimal-${oldAttrs.version}"; src = oldAttrs.src.override { inherit name; - sha256 = "0ivpr1a2w1ln1lx91q11rj9wp3rbfq33acrz2gxxvd80qqaq3zyh"; + sha256 = "11vcqxdgyarv89ijd46wzrdl2wk7xjirg7ynlz7r0smdcqrcl711"; }; meta = oldAttrs.meta // { diff --git a/pkgs/development/libraries/SDL/default.nix b/pkgs/development/libraries/SDL/default.nix index 7bbb1a5e1c92..7ef3c4c89686 100644 --- a/pkgs/development/libraries/SDL/default.nix +++ b/pkgs/development/libraries/SDL/default.nix @@ -1,15 +1,16 @@ -{ stdenv, lib, fetchurl, fetchpatch, pkgconfig, audiofile, libcap, libiconv -, openglSupport ? false, libGL, libGLU -, alsaSupport ? true, alsaLib -, x11Support ? stdenv.hostPlatform == stdenv.buildPlatform, libXext, libICE, libXrandr -, pulseaudioSupport ? true, libpulseaudio +{ stdenv, config, libGLSupported, fetchurl, fetchpatch, pkgconfig, audiofile, libcap, libiconv +, openglSupport ? libGLSupported, libGL, libGLU +, alsaSupport ? stdenv.isLinux, alsaLib +, x11Support ? !stdenv.isCygwin, libXext, libICE, libXrandr +, pulseaudioSupport ? config.pulseaudio or stdenv.isLinux, libpulseaudio , OpenGL, CoreAudio, CoreServices, AudioUnit, Kernel, Cocoa +, cf-private }: # NOTE: When editing this expression see if the same change applies to # SDL2 expression too -with lib; +with stdenv.lib; assert !stdenv.isDarwin -> alsaSupport || pulseaudioSupport; assert openglSupport -> (stdenv.isDarwin || x11Support && libGL != null && libGLU != null); @@ -41,7 +42,11 @@ stdenv.mkDerivation rec { buildInputs = [ ] ++ optional (!stdenv.hostPlatform.isMinGW) audiofile - ++ optionals stdenv.isDarwin [ AudioUnit CoreAudio CoreServices Kernel OpenGL ]; + ++ optionals stdenv.isDarwin [ + AudioUnit CoreAudio CoreServices Kernel OpenGL + # Needed for NSDefaultRunLoopMode symbols. + cf-private + ]; configureFlags = [ "--disable-oss" @@ -109,7 +114,7 @@ stdenv.mkDerivation rec { postFixup = '' for lib in $out/lib/*.so* ; do if [[ -L "$lib" ]]; then - patchelf --set-rpath "$(patchelf --print-rpath $lib):${lib.makeLibraryPath propagatedBuildInputs}" "$lib" + patchelf --set-rpath "$(patchelf --print-rpath $lib):${makeLibraryPath propagatedBuildInputs}" "$lib" fi done ''; diff --git a/pkgs/development/libraries/SDL2/default.nix b/pkgs/development/libraries/SDL2/default.nix index 7d8f5b2caee6..07a63a366f1b 100644 --- a/pkgs/development/libraries/SDL2/default.nix +++ b/pkgs/development/libraries/SDL2/default.nix @@ -1,31 +1,31 @@ -{ stdenv, lib, fetchurl, pkgconfig, pruneLibtoolFiles -, openglSupport ? false, libGL -, alsaSupport ? true, alsaLib -, x11Support ? true, libX11, xproto, libICE, libXi, libXScrnSaver, libXcursor, libXinerama, libXext, libXxf86vm, libXrandr -, waylandSupport ? true, wayland, wayland-protocols, libxkbcommon -, dbusSupport ? false, dbus +{ stdenv, config, libGLSupported, fetchurl, pkgconfig, pruneLibtoolFiles +, openglSupport ? libGLSupported, libGL +, alsaSupport ? stdenv.isLinux, alsaLib +, x11Support ? !stdenv.isCygwin, libX11, xproto, libICE, libXi, libXScrnSaver, libXcursor, libXinerama, libXext, libXxf86vm, libXrandr +, waylandSupport ? stdenv.isLinux, wayland, wayland-protocols, libxkbcommon +, dbusSupport ? stdenv.isLinux, dbus , udevSupport ? false, udev , ibusSupport ? false, ibus -, pulseaudioSupport ? true, libpulseaudio +, pulseaudioSupport ? config.pulseaudio or stdenv.isLinux, libpulseaudio , AudioUnit, Cocoa, CoreAudio, CoreServices, ForceFeedback, OpenGL -, audiofile, libiconv +, audiofile, cf-private, libiconv }: # NOTE: When editing this expression see if the same change applies to # SDL expression too -with lib; +with stdenv.lib; assert !stdenv.isDarwin -> alsaSupport || pulseaudioSupport; assert openglSupport -> (stdenv.isDarwin || x11Support && libGL != null); stdenv.mkDerivation rec { name = "SDL2-${version}"; - version = "2.0.8"; + version = "2.0.9"; src = fetchurl { url = "https://www.libsdl.org/release/${name}.tar.gz"; - sha256 = "1v4js1gkr75hzbxzhwzzif0sf9g07234sd23x1vdaqc661bprizd"; + sha256 = "1c94ndagzkdfqaa838yqg589p1nnqln8mv0hpwfhrkbfczf8cl95"; }; outputs = [ "out" "dev" ]; @@ -54,7 +54,11 @@ stdenv.mkDerivation rec { buildInputs = [ audiofile libiconv ] ++ dlopenBuildInputs ++ optional ibusSupport ibus - ++ optionals stdenv.isDarwin [ AudioUnit Cocoa CoreAudio CoreServices ForceFeedback OpenGL ]; + ++ optionals stdenv.isDarwin [ + AudioUnit Cocoa CoreAudio CoreServices ForceFeedback OpenGL + # Needed for NSDefaultRunLoopMode symbols. + cf-private + ]; # /build/SDL2-2.0.7/src/video/wayland/SDL_waylandevents.c:41:10: fatal error: # pointer-constraints-unstable-v1-client-protocol.h: No such file or directory diff --git a/pkgs/development/libraries/bamf/default.nix b/pkgs/development/libraries/bamf/default.nix index 0a2badea7cbf..3fcdbca34f5f 100644 --- a/pkgs/development/libraries/bamf/default.nix +++ b/pkgs/development/libraries/bamf/default.nix @@ -1,54 +1,66 @@ -{ stdenv, fetchurl, libgtop, libwnck3, glib, vala, pkgconfig -, libstartup_notification, gobjectIntrospection, gtk-doc +{ stdenv, autoconf, automake, libtool, gnome3, which, fetchgit, libgtop, libwnck3, glib, vala, pkgconfig +, libstartup_notification, gobjectIntrospection, gtk-doc, docbook_xsl , xorgserver, dbus, python2 }: stdenv.mkDerivation rec { - pname = "bamf"; - version = "0.5.3"; - name = "${pname}-${version}"; + name = "bamf-2018-02-07"; outputs = [ "out" "dev" "devdoc" ]; - src = fetchurl { - url = "https://launchpad.net/${pname}/0.5/${version}/+download/${name}.tar.gz"; - sha256 = "051vib8ndp09ph5bfwkgmzda94varzjafwxf6lqx7z1s8rd7n39l"; + src = fetchgit { + url = https://git.launchpad.net/~unity-team/bamf; + rev = "0.5.3+18.04.20180207.2-0ubuntu1"; + sha256 = "0hvbgzi0mzzzvcamd9mi1ykbk2l6zxffspyk5fpik8bij56nhzym"; }; nativeBuildInputs = [ - pkgconfig - gtk-doc + autoconf + automake + docbook_xsl + gnome3.gnome-common gobjectIntrospection + gtk-doc + libtool + pkgconfig vala + which # Tests - xorgserver + python2 + python2.pkgs.libxslt + python2.pkgs.libxml2 dbus - (python2.withPackages (pkgs: with pkgs; [ libxslt libxml2 ])) + xorgserver ]; buildInputs = [ + glib libgtop - libwnck3 libstartup_notification - glib + libwnck3 ]; # Fix hard-coded path # https://bugs.launchpad.net/bamf/+bug/1780557 postPatch = '' - substituteInPlace data/Makefile.in \ + substituteInPlace data/Makefile.am \ --replace '/usr/lib/systemd/user' '@prefix@/lib/systemd/user' ''; configureFlags = [ "--enable-headless-tests" + "--enable-gtk-doc" ]; # fix paths makeFlags = [ - "INTROSPECTION_GIRDIR=$(dev)/share/gir-1.0/" - "INTROSPECTION_TYPELIBDIR=$(out)/lib/girepository-1.0" + "INTROSPECTION_GIRDIR=${placeholder ''dev''}/share/gir-1.0/" + "INTROSPECTION_TYPELIBDIR=${placeholder ''out''}/lib/girepository-1.0" ]; + preConfigure = '' + ./autogen.sh + ''; + # TODO: Requires /etc/machine-id doCheck = false; diff --git a/pkgs/development/libraries/dlib/default.nix b/pkgs/development/libraries/dlib/default.nix index e5e3c2d662c2..a88b3f1b9b68 100644 --- a/pkgs/development/libraries/dlib/default.nix +++ b/pkgs/development/libraries/dlib/default.nix @@ -3,14 +3,14 @@ }: stdenv.mkDerivation rec { - version = "19.13"; + version = "19.16"; name = "dlib-${version}"; src = fetchFromGitHub { owner = "davisking"; repo = "dlib"; rev ="v${version}"; - sha256 = "11ia4pd2lm2s9hzwrdvimj3r2qcnvjdp3g4fry2j1a6z9f99zvz3"; + sha256 = "0ix52npsxfm6324jli7y0zkyijl5yirv2yzfncyd4sq0r9fcwb4p"; }; postPatch = '' diff --git a/pkgs/development/libraries/editline/default.nix b/pkgs/development/libraries/editline/default.nix index dc44c7d8705f..90e3ee9af5b2 100644 --- a/pkgs/development/libraries/editline/default.nix +++ b/pkgs/development/libraries/editline/default.nix @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ autoreconfHook ]; - dontDisableStatic = true; + outputs = [ "out" "dev" "man" "doc" ]; meta = with stdenv.lib; { homepage = http://troglobit.com/editline.html; diff --git a/pkgs/development/libraries/ffmpeg/generic.nix b/pkgs/development/libraries/ffmpeg/generic.nix index 7c3b3447d613..d11ef732a01f 100644 --- a/pkgs/development/libraries/ffmpeg/generic.nix +++ b/pkgs/development/libraries/ffmpeg/generic.nix @@ -1,6 +1,6 @@ { stdenv, fetchurl, pkgconfig, perl, texinfo, yasm , alsaLib, bzip2, fontconfig, freetype, gnutls, libiconv, lame, libass, libogg -, libssh, libtheora, libva, libvorbis, libvpx, lzma, libpulseaudio, soxr +, libssh, libtheora, libva, libdrm, libvorbis, libvpx, lzma, libpulseaudio, soxr , x264, x265, xvidcore, zlib, libopus, speex , openglSupport ? false, libGLU_combined ? null # Build options @@ -130,6 +130,7 @@ stdenv.mkDerivation rec { "--enable-libtheora" (ifMinVer "2.1" "--enable-libssh") (ifMinVer "0.6" (enableFeature vaapiSupport "vaapi")) + (ifMinVer "3.4" (enableFeature vaapiSupport "libdrm")) "--enable-vdpau" "--enable-libvorbis" (ifMinVer "0.6" (enableFeature vpxSupport "libvpx")) @@ -165,6 +166,7 @@ stdenv.mkDerivation rec { ++ optional vpxSupport libvpx ++ optionals (!isDarwin && !isAarch32) [ libpulseaudio ] # Need to be fixed on Darwin and ARM ++ optional ((isLinux || isFreeBSD) && !isAarch32) libva + ++ optional ((isLinux || isFreeBSD) && !isAarch32) libdrm ++ optional isLinux alsaLib ++ optionals isDarwin darwinFrameworks ++ optional vdpauSupport libvdpau diff --git a/pkgs/development/libraries/fmt/default.nix b/pkgs/development/libraries/fmt/default.nix index c120f7c9b43f..fbe947e3afb1 100644 --- a/pkgs/development/libraries/fmt/default.nix +++ b/pkgs/development/libraries/fmt/default.nix @@ -3,29 +3,41 @@ stdenv.mkDerivation rec { version = "5.2.1"; name = "fmt-${version}"; + src = fetchFromGitHub { owner = "fmtlib"; repo = "fmt"; rev = "${version}"; sha256 = "1cd8yq8va457iir1hlf17ksx11fx2hlb8i4jml8gj1875pizm0pk"; }; + + outputs = [ "out" "dev" ]; + nativeBuildInputs = [ cmake ]; + + cmakeFlags = [ + "-DFMT_TEST=TRUE" + "-DBUILD_SHARED_LIBS=${if enableShared then "TRUE" else "FALSE"}" + ]; + + enableParallelBuilding = true; + doCheck = true; # preCheckHook ensures the test binaries can find libfmt.so.5 preCheck = if enableShared then "export LD_LIBRARY_PATH=\"$PWD\"" else ""; - cmakeFlags = [ "-DFMT_TEST=yes" - "-DBUILD_SHARED_LIBS=${if enableShared then "ON" else "OFF"}" ]; + meta = with stdenv.lib; { - homepage = http://fmtlib.net/; description = "Small, safe and fast formatting library"; longDescription = '' fmt (formerly cppformat) is an open-source formatting library. It can be used as a fast and safe alternative to printf and IOStreams. ''; + homepage = http://fmtlib.net/; + downloadPage = https://github.com/fmtlib/fmt/; maintainers = [ maintainers.jdehaas ]; license = licenses.bsd2; - platforms = platforms.unix; + platforms = platforms.all; }; } diff --git a/pkgs/development/libraries/folly/default.nix b/pkgs/development/libraries/folly/default.nix index 9694765bb93f..1598dafaad05 100644 --- a/pkgs/development/libraries/folly/default.nix +++ b/pkgs/development/libraries/folly/default.nix @@ -1,26 +1,29 @@ -{ stdenv, fetchFromGitHub, autoreconfHook, pkgconfig, boost, libevent -, double-conversion, glog, google-gflags, python, libiberty, openssl }: +{ stdenv, fetchFromGitHub, cmake, boost, libevent, double-conversion, glog +, google-gflags, libiberty, openssl }: stdenv.mkDerivation rec { name = "folly-${version}"; - version = "2018.08.27.00"; + version = "2018.10.29.00"; src = fetchFromGitHub { owner = "facebook"; repo = "folly"; rev = "v${version}"; - sha256 = "0slnhn8q26mj23gm36c61b4ar857q8c844ifpvw4q329nndbrgcz"; + sha256 = "0bbp4w8wbawh3ilgkl7rwvbqkdczpvfn92f9lcvxj8sili0nldab"; }; - nativeBuildInputs = [ autoreconfHook python pkgconfig ]; - buildInputs = [ libiberty boost libevent double-conversion glog google-gflags openssl ]; + nativeBuildInputs = [ cmake ]; - postPatch = "cd folly"; - preBuild = '' - patchShebangs build - ''; - - configureFlags = [ "--with-boost-libdir=${boost.out}/lib" ]; + # See CMake/folly-deps.cmake in the Folly source tree. + buildInputs = [ + boost + double-conversion + glog + google-gflags + libevent + libiberty + openssl + ]; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/fstrcmp/default.nix b/pkgs/development/libraries/fstrcmp/default.nix new file mode 100644 index 000000000000..68f3c9d0ee59 --- /dev/null +++ b/pkgs/development/libraries/fstrcmp/default.nix @@ -0,0 +1,31 @@ +{ stdenv, fetchzip, libtool, ghostscript, groff }: + +stdenv.mkDerivation rec { + name = "fstrcmp-${version}"; + version = "0.7"; + + src = fetchzip { + url = "https://sourceforge.net/projects/fstrcmp/files/fstrcmp/${version}/fstrcmp-${version}.D001.tar.gz"; + sha256 = "0yg3y3k0wz50gmhgigfi2dx725w1gc8snb95ih7vpcnj6kabgz9a"; + }; + + outputs = [ "out" "dev" "doc" "man" "devman" ]; + + nativeBuildInputs = [ libtool ghostscript groff ]; + + enableParallelBuilding = true; + + meta = with stdenv.lib; { + description = "Make fuzzy comparisons of strings and byte arrays"; + longDescription = '' + The fstrcmp project provides a library that is used to make fuzzy + comparisons of strings and byte arrays, including multi-byte character + strings. + ''; + homepage = http://fstrcmp.sourceforge.net/; + downloadPage = https://sourceforge.net/projects/fstrcmp/; + license = licenses.gpl3; + maintainers = [ maintainers.sephalon ]; + platforms = platforms.unix; + }; +} diff --git a/pkgs/development/libraries/gmime/3.nix b/pkgs/development/libraries/gmime/3.nix index 65c99610a5c7..63d00f1dd1a7 100644 --- a/pkgs/development/libraries/gmime/3.nix +++ b/pkgs/development/libraries/gmime/3.nix @@ -1,17 +1,17 @@ -{ stdenv, fetchurl, pkgconfig, glib, zlib, gnupg, gpgme, libidn, gobjectIntrospection }: +{ stdenv, fetchurl, pkgconfig, glib, zlib, gnupg, gpgme, libidn2, libunistring, gobjectIntrospection }: stdenv.mkDerivation rec { - version = "3.2.0"; + version = "3.2.1"; name = "gmime-${version}"; src = fetchurl { url = "mirror://gnome/sources/gmime/3.2/${name}.tar.xz"; - sha256 = "1q6palbpf6lh6bvy9ly26q5apl5k0z0r4mvl6zzqh90rz4rn1v3m"; + sha256 = "0q65nalxzpyjg37gdlpj9v6028wp0qx47z96q0ff6znw217nzzjn"; }; outputs = [ "out" "dev" ]; - buildInputs = [ gobjectIntrospection zlib gpgme libidn ]; + buildInputs = [ gobjectIntrospection zlib gpgme libidn2 libunistring ]; nativeBuildInputs = [ pkgconfig ]; propagatedBuildInputs = [ glib ]; configureFlags = [ "--enable-introspection=yes" ]; @@ -23,6 +23,8 @@ stdenv.mkDerivation rec { checkInputs = [ gnupg ]; + doCheck = true; + enableParallelBuilding = true; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/granite/default.nix b/pkgs/development/libraries/granite/default.nix index 1ee0970ffad2..6892ea6364d7 100644 --- a/pkgs/development/libraries/granite/default.nix +++ b/pkgs/development/libraries/granite/default.nix @@ -1,12 +1,14 @@ -{ stdenv, fetchFromGitHub, perl, cmake, ninja, vala_0_40, pkgconfig, gobjectIntrospection, glib, gtk3, gnome3, gettext }: +{ stdenv, fetchFromGitHub, cmake, ninja, vala_0_40, pkgconfig, gobjectIntrospection, gnome3, gtk3, glib, gettext }: stdenv.mkDerivation rec { - name = "granite-${version}"; - version = "5.1.0"; + pname = "granite"; + version = "5.2.0"; + + name = "${pname}-${version}"; src = fetchFromGitHub { owner = "elementary"; - repo = "granite"; + repo = pname; rev = version; sha256 = "1v1yhz6rp616xi417m9r8072s6mpz5i8vkdyj264b73p0lgjwh40"; }; @@ -21,10 +23,10 @@ stdenv.mkDerivation rec { gettext gobjectIntrospection ninja - perl pkgconfig - vala_0_40 + vala_0_40 # should be `elementary.vala` when elementary attribute set is merged ]; + buildInputs = [ glib gnome3.libgee @@ -33,9 +35,12 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "An extension to GTK+ used by elementary OS"; - longDescription = "An extension to GTK+ that provides several useful widgets and classes to ease application development. Designed for elementary OS."; + longDescription = '' + Granite is a companion library for GTK+ and GLib. Among other things, it provides complex widgets and convenience functions + designed for use in apps built for elementary OS. + ''; homepage = https://github.com/elementary/granite; - license = licenses.lgpl3; + license = licenses.lgpl3Plus; platforms = platforms.linux; maintainers = with maintainers; [ vozz worldofpeace ]; }; diff --git a/pkgs/development/libraries/grpc/default.nix b/pkgs/development/libraries/grpc/default.nix index a21e2aacde2a..f4145c85199b 100644 --- a/pkgs/development/libraries/grpc/default.nix +++ b/pkgs/development/libraries/grpc/default.nix @@ -26,6 +26,8 @@ stdenv.mkDerivation rec { rm -vf BUILD ''; + NIX_CFLAGS_COMPILE = stdenv.lib.optionalString stdenv.cc.isClang "-Wno-error=unknown-warning-option"; + enableParallelBuilds = true; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/gsasl/default.nix b/pkgs/development/libraries/gsasl/default.nix index 71da2c716f84..a1df933149fd 100644 --- a/pkgs/development/libraries/gsasl/default.nix +++ b/pkgs/development/libraries/gsasl/default.nix @@ -12,7 +12,7 @@ stdenv.mkDerivation rec { configureFlags = [ "--with-gssapi-impl=mit" ]; - doCheck = true; + doCheck = !stdenv.hostPlatform.isDarwin; meta = { description = "GNU SASL, Simple Authentication and Security Layer library"; diff --git a/pkgs/development/libraries/http-parser/default.nix b/pkgs/development/libraries/http-parser/default.nix index 5d4eae4e0639..02d767000682 100644 --- a/pkgs/development/libraries/http-parser/default.nix +++ b/pkgs/development/libraries/http-parser/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, python2Packages, utillinux, fixDarwinDylibNames }: +{ stdenv, fetchurl }: let version = "2.8.1"; @@ -10,38 +10,18 @@ in stdenv.mkDerivation { sha256 = "15ids8k2f0xhnnxh4m85w2f78pg5ndiwrpl24kyssznnp1l5yqai"; }; + NIX_CFLAGS_COMPILE = "-Wno-error"; patches = [ ./build-shared.patch ]; + makeFlags = [ "DESTDIR=" "PREFIX=$(out)" ]; + buildFlags = "library"; + doCheck = true; + checkTarget = "test"; - configurePhase = "gyp -f make --depth=`pwd` http_parser.gyp"; - - buildFlags = [ "BUILDTYPE=Release" ]; - - buildInputs = - [ python2Packages.gyp ] - ++ stdenv.lib.optional stdenv.isLinux utillinux - ++ stdenv.lib.optionals stdenv.isDarwin [ python2Packages.python fixDarwinDylibNames ]; - - doCheck = !stdenv.isDarwin; - - checkPhase = '' - out/Release/test-nonstrict - out/Release/test-strict - ''; - - installPhase = '' - mkdir -p $out/lib - mv out/Release/${if stdenv.isDarwin then "*.dylib" else "lib.target/*"} $out/lib - - mkdir -p $out/include - mv http_parser.h $out/include - ''; - - meta = { + meta = with stdenv.lib; { description = "An HTTP message parser written in C"; - homepage = https://github.com/joyent/http-parser; - - license = stdenv.lib.licenses.mit; - platforms = stdenv.lib.platforms.unix; + maintainers = with maintainers; [ matthewbauer ]; + license = licenses.mit; + platforms = platforms.unix; }; } diff --git a/pkgs/development/libraries/imlib/default.nix b/pkgs/development/libraries/imlib/default.nix index 2b95742c44c0..eec68015c25b 100644 --- a/pkgs/development/libraries/imlib/default.nix +++ b/pkgs/development/libraries/imlib/default.nix @@ -15,7 +15,9 @@ stdenv.mkDerivation { buildInputs = [libjpeg libXext libX11 xextproto libtiff libungif libpng]; - meta = { - platforms = stdenv.lib.platforms.unix; + meta = with stdenv.lib; { + description = "An image loading and rendering library for X11"; + platforms = platforms.unix; + license = with licenses; [ gpl2 lgpl2 ]; }; } diff --git a/pkgs/development/libraries/incrtcl/default.nix b/pkgs/development/libraries/incrtcl/default.nix index b9781ba9aa08..a4a009c66580 100644 --- a/pkgs/development/libraries/incrtcl/default.nix +++ b/pkgs/development/libraries/incrtcl/default.nix @@ -3,7 +3,7 @@ stdenv.mkDerivation rec { name = "incrtcl-${version}"; version = "4.0.4"; - + src = fetchurl { url = mirror://sourceforge/incrtcl/%5BIncr%20Tcl_Tk%5D-source/3.4/itcl4.0.4.tar.gz; sha256 = "1ppc9b13cvmc6rp77k7dl2zb26xk0z30vxygmr4h1xr2r8w091k3"; @@ -22,9 +22,10 @@ stdenv.mkDerivation rec { libPrefix = "itcl3.4"; }; - meta = { + meta = with stdenv.lib; { homepage = http://incrtcl.sourceforge.net/; description = "Object Oriented Enhancements for Tcl/Tk"; - platforms = stdenv.lib.platforms.unix; + platforms = platforms.unix; + license = licenses.tcltk; }; } diff --git a/pkgs/development/libraries/jama/default.nix b/pkgs/development/libraries/jama/default.nix index 36eedadc4c2e..29fabdbb3b63 100644 --- a/pkgs/development/libraries/jama/default.nix +++ b/pkgs/development/libraries/jama/default.nix @@ -3,7 +3,7 @@ stdenv.mkDerivation rec { name = "jama-${version}"; version = "1.2.5"; - + src = fetchurl { url = https://math.nist.gov/tnt/jama125.zip; sha256 = "031ns526fvi2nv7jzzv02i7i5sjcyr0gj884i3an67qhsx8vyckl"; @@ -21,9 +21,10 @@ stdenv.mkDerivation rec { cp *.h $out/include ''; - meta = { + meta = with stdenv.lib; { homepage = https://math.nist.gov/tnt/; description = "JAMA/C++ Linear Algebra Package: Java-like matrix C++ templates"; - platforms = stdenv.lib.platforms.unix; + platforms = platforms.unix; + license = licenses.publicDomain; }; } diff --git a/pkgs/development/libraries/jasper/default.nix b/pkgs/development/libraries/jasper/default.nix index de4848c7dda4..eb9282274328 100644 --- a/pkgs/development/libraries/jasper/default.nix +++ b/pkgs/development/libraries/jasper/default.nix @@ -40,6 +40,7 @@ stdenv.mkDerivation rec { homepage = https://www.ece.uvic.ca/~frodo/jasper/; description = "JPEG2000 Library"; platforms = platforms.unix; + license = licenses.jasper; maintainers = with maintainers; [ pSub ]; }; } diff --git a/pkgs/development/libraries/java/dbus-java/default.nix b/pkgs/development/libraries/java/dbus-java/default.nix index daee9adb1fdc..5ec10cc7e0df 100644 --- a/pkgs/development/libraries/java/dbus-java/default.nix +++ b/pkgs/development/libraries/java/dbus-java/default.nix @@ -18,8 +18,9 @@ stdenv.mkDerivation { -e "s|install: install-bin install-man install-doc|install: install-bin|" Makefile ''; - meta = { - platforms = stdenv.lib.platforms.linux; - maintainers = [ stdenv.lib.maintainers.sander ]; + meta = with stdenv.lib; { + platforms = platforms.linux; + maintainers = [ maintainers.sander ]; + license = licenses.afl21; }; } diff --git a/pkgs/development/libraries/java/gwt-dragdrop/default.nix b/pkgs/development/libraries/java/gwt-dragdrop/default.nix index b9d66fdc9716..e34699d7740e 100644 --- a/pkgs/development/libraries/java/gwt-dragdrop/default.nix +++ b/pkgs/development/libraries/java/gwt-dragdrop/default.nix @@ -3,13 +3,14 @@ stdenv.mkDerivation { name = "gwt-dnd-2.6.5"; builder = ./builder.sh; - + src = fetchurl { url = http://gwt-dnd.googlecode.com/files/gwt-dnd-2.6.5.jar; sha256 = "07zdlr8afs499asnw0dcjmw1cnjc646v91lflx5dv4qj374c97fw"; - }; + }; - meta = { - platforms = stdenv.lib.platforms.unix; + meta = with stdenv.lib; { + platforms = platforms.unix; + license = licenses.asl20; }; } diff --git a/pkgs/development/libraries/java/gwt-widgets/default.nix b/pkgs/development/libraries/java/gwt-widgets/default.nix index b182964f6579..ec407076906d 100644 --- a/pkgs/development/libraries/java/gwt-widgets/default.nix +++ b/pkgs/development/libraries/java/gwt-widgets/default.nix @@ -3,13 +3,14 @@ stdenv.mkDerivation { name = "gwt-widgets-0.2.0"; builder = ./builder.sh; - + src = fetchurl { url = mirror://sourceforge/gwt-widget/gwt-widgets-0.2.0-bin.tar.gz; sha256 = "09isj4j6842rj13nv8264irkjjhvmgihmi170ciabc98911bakxb"; - }; + }; - meta = { - platforms = stdenv.lib.platforms.unix; + meta = with stdenv.lib; { + platforms = platforms.unix; + license = with licenses; [ afl21 lgpl2 ]; }; } diff --git a/pkgs/development/libraries/java/hsqldb/default.nix b/pkgs/development/libraries/java/hsqldb/default.nix index 97ffcb647d62..a478ab0fc502 100644 --- a/pkgs/development/libraries/java/hsqldb/default.nix +++ b/pkgs/development/libraries/java/hsqldb/default.nix @@ -12,8 +12,9 @@ stdenv.mkDerivation { buildInputs = [ unzip ]; - - meta = { - platforms = stdenv.lib.platforms.unix; + + meta = with stdenv.lib; { + platforms = platforms.unix; + license = licenses.bsd3; }; } diff --git a/pkgs/development/libraries/java/httpunit/default.nix b/pkgs/development/libraries/java/httpunit/default.nix index 221a2e93e4fc..500c575f73aa 100644 --- a/pkgs/development/libraries/java/httpunit/default.nix +++ b/pkgs/development/libraries/java/httpunit/default.nix @@ -11,7 +11,9 @@ stdenv.mkDerivation { inherit unzip; - meta = { - platforms = stdenv.lib.platforms.unix; + meta = with stdenv.lib; { + homepage = http://httpunit.sourceforge.net; + platforms = platforms.unix; + license = licenses.mit; }; } diff --git a/pkgs/development/libraries/java/jdom/default.nix b/pkgs/development/libraries/java/jdom/default.nix index 99d213a01dac..16755471acd7 100644 --- a/pkgs/development/libraries/java/jdom/default.nix +++ b/pkgs/development/libraries/java/jdom/default.nix @@ -9,7 +9,10 @@ stdenv.mkDerivation { sha256 = "1igmxzcy0s25zcy9vmcw0kd13lh60r0b4qg8lnp1jic33f427pxf"; }; - meta = { - platforms = stdenv.lib.platforms.unix; + meta = with stdenv.lib; { + description = "Java-based solution for accessing, manipulating, and outputting XML data from Java code"; + homepage = http://www.jdom.org; + platforms = platforms.unix; + license = licenses.bsdOriginal; }; } diff --git a/pkgs/development/libraries/java/libmatthew-java/default.nix b/pkgs/development/libraries/java/libmatthew-java/default.nix index ad5192f94ce2..98291a7763ca 100644 --- a/pkgs/development/libraries/java/libmatthew-java/default.nix +++ b/pkgs/development/libraries/java/libmatthew-java/default.nix @@ -10,8 +10,9 @@ stdenv.mkDerivation { PREFIX=''''${out}''; buildInputs = [ jdk ]; - meta = { - platforms = stdenv.lib.platforms.linux; - maintainers = [ stdenv.lib.maintainers.sander ]; + meta = with stdenv.lib; { + platforms = platforms.linux; + maintainers = [ maintainers.sander ]; + license = licenses.mit; }; } diff --git a/pkgs/development/libraries/java/lombok/default.nix b/pkgs/development/libraries/java/lombok/default.nix index 5ec4634d6323..7f932d52dc41 100644 --- a/pkgs/development/libraries/java/lombok/default.nix +++ b/pkgs/development/libraries/java/lombok/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl }: stdenv.mkDerivation rec { - name = "lombok-1.16.22"; + name = "lombok-1.18.4"; src = fetchurl { url = "https://projectlombok.org/downloads/${name}.jar"; - sha256 = "1hr2jjlqdnxrw7ablqkf7ljc6n2q6a04ww14di06zs6i3l82zzpa"; + sha256 = "0hlpycnmzd71ihn59hzf445dvwky2lkv57jimx91i6v7xcnr5wrr"; }; buildCommand = '' diff --git a/pkgs/development/libraries/java/lucene/default.nix b/pkgs/development/libraries/java/lucene/default.nix index 6f6534cee3ea..691b9905b04f 100644 --- a/pkgs/development/libraries/java/lucene/default.nix +++ b/pkgs/development/libraries/java/lucene/default.nix @@ -11,7 +11,9 @@ stdenv.mkDerivation rec { sha256 = "1mxaxg65f7v8n60irjwm24v7hcisbl0srmpvcy1l4scs6rjj1awh"; }; - meta = { - platforms = stdenv.lib.platforms.unix; + meta = with stdenv.lib; { + description = "Java full-text search engine"; + platforms = platforms.unix; + license = licenses.asl20; }; } diff --git a/pkgs/development/libraries/java/mockobjects/default.nix b/pkgs/development/libraries/java/mockobjects/default.nix index 551375d33bd6..ae93765ff981 100644 --- a/pkgs/development/libraries/java/mockobjects/default.nix +++ b/pkgs/development/libraries/java/mockobjects/default.nix @@ -9,7 +9,9 @@ stdenv.mkDerivation { sha256 = "18rnyqfcyh0s3dwkkaszdd50ssyjx5fa1y3ii309ldqg693lfgnz"; }; - meta = { - platforms = stdenv.lib.platforms.unix; + meta = with stdenv.lib; { + description = "Generic unit testing framework and methodology for testing any kind of code"; + platforms = platforms.unix; + license = licenses.asl20; }; } diff --git a/pkgs/development/libraries/java/saxon/default.nix b/pkgs/development/libraries/java/saxon/default.nix index ca9aa8fc36e8..687e1e8a1deb 100644 --- a/pkgs/development/libraries/java/saxon/default.nix +++ b/pkgs/development/libraries/java/saxon/default.nix @@ -71,12 +71,12 @@ in { saxon-he = common { pname = "saxon-he"; - version = "9.8.0.6"; + version = "9.9.0.1"; prog = "saxon-he"; jar = "saxon9he"; src = fetchurl { - url = mirror://sourceforge/saxon/Saxon-HE/9.8/SaxonHE9-8-0-6J.zip; - sha256 = "03r4djm298rxz8q7jph63h9niglrl3rifxskq1b3bclx5rgxi2lk"; + url = mirror://sourceforge/saxon/Saxon-HE/9.9/SaxonHE9-9-0-1J.zip; + sha256 = "1inxd7ia7rl9fxfrw8dy9sb7rqv76ipblaki5262688wf2dscs60"; }; description = "Processor for XSLT 3.0, XPath 2.0 and 3.1, and XQuery 3.1"; }; diff --git a/pkgs/development/libraries/jemalloc/common.nix b/pkgs/development/libraries/jemalloc/common.nix index d8866ae3ff89..593f4411f19f 100644 --- a/pkgs/development/libraries/jemalloc/common.nix +++ b/pkgs/development/libraries/jemalloc/common.nix @@ -12,11 +12,7 @@ stdenv.mkDerivation (rec { # By default, jemalloc puts a je_ prefix onto all its symbols on OSX, which # then stops downstream builds (mariadb in particular) from detecting it. This # option should remove the prefix and give us a working jemalloc. - configureFlags = stdenv.lib.optional stdenv.isDarwin "--with-jemalloc-prefix=" - # jemalloc is unable to correctly detect transparent hugepage support on - # ARM (https://github.com/jemalloc/jemalloc/issues/526), and the default - # kernel ARMv6/7 kernel does not enable it, so we explicitly disable support - ++ stdenv.lib.optional stdenv.isAarch32 "--disable-thp"; + configureFlags = stdenv.lib.optional stdenv.isDarwin "--with-jemalloc-prefix="; doCheck = true; enableParallelBuilding = true; diff --git a/pkgs/development/libraries/jemalloc/default.nix b/pkgs/development/libraries/jemalloc/default.nix index 40c06cbffdf0..8cb7c1f96733 100644 --- a/pkgs/development/libraries/jemalloc/default.nix +++ b/pkgs/development/libraries/jemalloc/default.nix @@ -1,10 +1,6 @@ { stdenv, fetchurl, fetchpatch }: import ./common.nix { inherit stdenv fetchurl; - version = "5.0.1"; - sha256 = "4814781d395b0ef093b21a08e8e6e0bd3dab8762f9935bbfb71679b0dea7c3e9"; - patches = stdenv.lib.optional stdenv.isAarch64 (fetchpatch { - url = "https://patch-diff.githubusercontent.com/raw/jemalloc/jemalloc/pull/1035.patch"; - sha256 = "02y0q3dp253bipxv4r954nqipbjbj92p6ww9bx5bk3d8pa81wkqq"; - }); + version = "5.1.0"; + sha256 = "0s3jpcyhzia8d4k0xyc67is78kg416p9yc3c2f9w6fhhqqffd5jk"; } diff --git a/pkgs/development/libraries/kerberos/krb5.nix b/pkgs/development/libraries/kerberos/krb5.nix index 4e3ba399cc3f..afb928aff6e9 100644 --- a/pkgs/development/libraries/kerberos/krb5.nix +++ b/pkgs/development/libraries/kerberos/krb5.nix @@ -40,7 +40,7 @@ stdenv.mkDerivation rec { # Provides the mig command used by the build scripts ++ optional stdenv.isDarwin bootstrap_cmds; buildInputs = [ openssl ] - ++ optionals (stdenv.hostPlatform.isLinux) [ keyutils ] + ++ optionals (stdenv.hostPlatform.isLinux && stdenv.hostPlatform.libc != "bionic") [ keyutils ] ++ optionals (!libOnly) [ openldap libedit ]; preConfigure = "cd ./src"; diff --git a/pkgs/development/libraries/leveldb/default.nix b/pkgs/development/libraries/leveldb/default.nix index 2b50c09af5cc..c459a4048e45 100644 --- a/pkgs/development/libraries/leveldb/default.nix +++ b/pkgs/development/libraries/leveldb/default.nix @@ -2,21 +2,21 @@ stdenv.mkDerivation rec { name = "leveldb-${version}"; - version = "1.18"; + version = "1.20"; src = fetchFromGitHub { owner = "google"; repo = "leveldb"; rev = "v${version}"; - sha256 = "1bnsii47vbyqnbah42qgq6pbmmcg4k3fynjnw7whqfv6lpdgmb8d"; + sha256 = "01kxga1hv4wp94agx5vl3ybxfw5klqrdsrb6p6ywvnjmjxm8322y"; }; buildPhase = '' - make all leveldbutil libmemenv.a + make all ''; installPhase = (stdenv.lib.optionalString stdenv.isDarwin '' - for file in *.dylib*; do + for file in out-shared/*.dylib*; do install_name_tool -id $out/lib/$file $file done '') + # XXX consider removing above after transition to cmake in the next release @@ -27,9 +27,10 @@ stdenv.mkDerivation rec { mkdir -p $out/include/leveldb/helpers cp helpers/memenv/memenv.h $out/include/leveldb/helpers - cp lib* $out/lib + cp out-shared/lib* $out/lib + cp out-static/lib* $out/lib - cp leveldbutil $out/bin + cp out-static/leveldbutil $out/bin "; meta = with stdenv.lib; { diff --git a/pkgs/development/libraries/libid3tag/CVE-2017-11550-and-CVE-2017-11551.patch b/pkgs/development/libraries/libid3tag/CVE-2017-11550-and-CVE-2017-11551.patch new file mode 100644 index 000000000000..b1f9d0978cec --- /dev/null +++ b/pkgs/development/libraries/libid3tag/CVE-2017-11550-and-CVE-2017-11551.patch @@ -0,0 +1,13 @@ +Common subdirectories: libid3tag-0.15.1b/msvc++ and libid3tag-0.15.1b-patched/msvc++ +diff -uwp libid3tag-0.15.1b/utf16.c libid3tag-0.15.1b-patched/utf16.c +--- libid3tag-0.15.1b/utf16.c 2004-01-23 10:41:32.000000000 +0100 ++++ libid3tag-0.15.1b-patched/utf16.c 2018-11-01 13:12:00.866050641 +0100 +@@ -250,6 +250,8 @@ id3_ucs4_t *id3_utf16_deserialize(id3_by + id3_ucs4_t *ucs4; + + end = *ptr + (length & ~1); ++ if (end == *ptr) ++ return 0; + + utf16 = malloc((length / 2 + 1) * sizeof(*utf16)); + if (utf16 == 0) diff --git a/pkgs/development/libraries/libid3tag/default.nix b/pkgs/development/libraries/libid3tag/default.nix index 0289a5331f89..4b7d9bdc2e32 100644 --- a/pkgs/development/libraries/libid3tag/default.nix +++ b/pkgs/development/libraries/libid3tag/default.nix @@ -14,7 +14,10 @@ stdenv.mkDerivation rec { propagatedBuildInputs = [ zlib gperf ]; - patches = [ ./debian-patches.patch ]; + patches = [ + ./debian-patches.patch + ./CVE-2017-11550-and-CVE-2017-11551.patch + ]; preConfigure = '' configureFlagsArray+=( diff --git a/pkgs/development/libraries/libmikmod/default.nix b/pkgs/development/libraries/libmikmod/default.nix index c509fcd2b4f8..c83d2610dbfa 100644 --- a/pkgs/development/libraries/libmikmod/default.nix +++ b/pkgs/development/libraries/libmikmod/default.nix @@ -11,7 +11,7 @@ in stdenv.mkDerivation rec { }; buildInputs = [ texinfo ] - ++ optionals stdenv.isLinux [ alsaLib libpulseaudio ] + ++ optional stdenv.isLinux alsaLib ++ optional stdenv.isDarwin CoreAudio; propagatedBuildInputs = optional stdenv.isLinux libpulseaudio; diff --git a/pkgs/development/libraries/libmtp/default.nix b/pkgs/development/libraries/libmtp/default.nix index 1d8dd7e20f14..e750c2c6c70e 100644 --- a/pkgs/development/libraries/libmtp/default.nix +++ b/pkgs/development/libraries/libmtp/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, pkgconfig, libusb1, libiconv }: stdenv.mkDerivation rec { - name = "libmtp-1.1.15"; + name = "libmtp-1.1.16"; src = fetchurl { url = "mirror://sourceforge/libmtp/${name}.tar.gz"; - sha256 = "089h79nkz7wcr3lbqi7025l8p75hbp0aigxk3wdk2zkm8q5r0h6h"; + sha256 = "185vh9bds6dcy00ycggg69g4v7m3api40zv8vrcfb3fk3vfzjs2v"; }; outputs = [ "bin" "dev" "out" ]; diff --git a/pkgs/development/libraries/libui/default.nix b/pkgs/development/libraries/libui/default.nix index 9eb2fe04fe68..150e299ac422 100644 --- a/pkgs/development/libraries/libui/default.nix +++ b/pkgs/development/libraries/libui/default.nix @@ -13,7 +13,7 @@ in sha256 = "1lpbfa298c61aarlzgp7vghrmxg1274pzxh1j9isv8x758gk6mfn"; }; - nativeBuildInputs = [ pkgconfig ]; + nativeBuildInputs = [ pkgconfig ]; buildInputs = [ cmake ] ++ (if backend == "darwin" then [darwin.apple_sdk.frameworks.Cocoa] else if backend == "unix" then [gtk3] @@ -22,10 +22,6 @@ in preConfigure = stdenv.lib.optionalString stdenv.isDarwin '' sed -i 's/set(CMAKE_OSX_DEPLOYMENT_TARGET "10.8")//' ./CMakeLists.txt ''; - cmakeFlags = stdenv.lib.optionals stdenv.isDarwin [ - "-DCMAKE_OSX_SYSROOT=" - "-DCMAKE_OSX_DEPLOYMENT_TARGET=" - ]; installPhase = '' mkdir -p $out/{include,lib} diff --git a/pkgs/development/libraries/lightstep-tracer-cpp/default.nix b/pkgs/development/libraries/lightstep-tracer-cpp/default.nix index f2a8d75a9cbb..ab0e51bae261 100644 --- a/pkgs/development/libraries/lightstep-tracer-cpp/default.nix +++ b/pkgs/development/libraries/lightstep-tracer-cpp/default.nix @@ -1,6 +1,5 @@ -{ stdenv, lib, fetchFromGitHub, pkgconfig, protobuf, automake -, autoreconfHook, zlib -, enableGrpc ? false +{ stdenv, lib, fetchFromGitHub, pkgconfig, protobuf, cmake, zlib +, opentracing-cpp, enableGrpc ? false }: let @@ -9,33 +8,31 @@ let fetchFromGitHub { owner = "lightstep"; repo = "lightstep-tracer-common"; - rev = "fe1f65f4a221746f9fffe8bf544c81d4e1b8aded"; - sha256 = "1qqpjxfrjmhnhs15nhbfv28fsgzi57vmfabxlzc99j4vl78h5iln"; + rev = "5fe3bf885bcece14c3c65df06c86c826ba45ad69"; + sha256 = "1q39a0zaqbnqyhl2hza2xzc44235p65bbkfkzs2981niscmggq8w"; }; in stdenv.mkDerivation rec { name = "lightstep-tracer-cpp-${version}"; - version = "0.36"; + version = "0.8.1"; src = fetchFromGitHub { owner = "lightstep"; repo = "lightstep-tracer-cpp"; - rev = "v0_36"; - sha256 = "1sfj91bn7gw7fga7xawag076c8j9l7kiwhm4x3zh17qhycmaqq16"; + rev = "v${version}"; + sha256 = "1m4kl70lhvy1bsmkdh6bf2fddz5v1ikb27vgi99i2akpq40g4fvf"; }; postUnpack = '' cp -r ${common}/* $sourceRoot/lightstep-tracer-common ''; - preConfigure = lib.optionalString (!enableGrpc) '' - configureFlagsArray+=("--disable-grpc") - ''; + cmakeFlags = ["-DOPENTRACING_INCLUDE_DIR=${opentracing-cpp}/include" "-DOPENTRACING_LIBRARY=${opentracing-cpp}/lib/libopentracing.so"] ++ lib.optional (!enableGrpc) [ "-DWITH_GRPC=OFF" ]; nativeBuildInputs = [ - pkgconfig automake autoreconfHook + pkgconfig cmake ]; buildInputs = [ @@ -48,6 +45,5 @@ stdenv.mkDerivation rec { license = licenses.mit; platforms = platforms.linux; maintainers = with maintainers; [ cstrahan ]; - broken = true; # 2018-02-16 }; } diff --git a/pkgs/development/libraries/nlohmann_json/default.nix b/pkgs/development/libraries/nlohmann_json/default.nix index 25d4386cec2c..d57461853d33 100644 --- a/pkgs/development/libraries/nlohmann_json/default.nix +++ b/pkgs/development/libraries/nlohmann_json/default.nix @@ -3,13 +3,13 @@ stdenv.mkDerivation rec { name = "nlohmann_json-${version}"; - version = "3.3.0"; + version = "3.4.0"; src = fetchFromGitHub { owner = "nlohmann"; repo = "json"; rev = "v${version}"; - sha256 = "1plg9l1avnjsg6khrd88yj9cbzbbkwzpc5synmicqndb35wndn5h"; + sha256 = "1140gz5za7yvfcphdgxaq1dm4b1vxy1m8d1w0s0smv4vvdvl26ym"; }; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/development/libraries/nlopt/default.nix b/pkgs/development/libraries/nlopt/default.nix index 904cdc6a3daa..48b7acf2896c 100644 --- a/pkgs/development/libraries/nlopt/default.nix +++ b/pkgs/development/libraries/nlopt/default.nix @@ -1,13 +1,20 @@ -{ fetchurl, stdenv, octave ? null }: +{ fetchurl, stdenv, octave ? null, cmake }: -stdenv.mkDerivation rec { - name = "nlopt-2.4.2"; +let + + version = "2.5.0"; + +in + +stdenv.mkDerivation { + name = "nlopt-${version}"; src = fetchurl { - url = "http://ab-initio.mit.edu/nlopt/${name}.tar.gz"; - sha256 = "12cfkkhcdf4zmb6h7y6qvvdvqjs2xf9sjpa3rl3bq76px4yn76c0"; + url = "https://github.com/stevengj/nlopt/archive/v${version}.tar.gz"; + sha256 = "1bmlsdzkw8xbigiihffyb0kdaqbyfn7dr8s5pdgavy7z05bpmpf6"; }; + nativeBuildInputs = [ cmake ]; buildInputs = [ octave ]; configureFlags = [ @@ -24,7 +31,7 @@ stdenv.mkDerivation rec { ]; meta = { - homepage = http://ab-initio.mit.edu/nlopt/; + homepage = "https://nlopt.readthedocs.io/en/latest/"; description = "Free open-source library for nonlinear optimization"; license = stdenv.lib.licenses.lgpl21Plus; hydraPlatforms = stdenv.lib.platforms.linux; diff --git a/pkgs/development/libraries/openh264/default.nix b/pkgs/development/libraries/openh264/default.nix index 0a0b4c8d5498..c8208ce27bae 100644 --- a/pkgs/development/libraries/openh264/default.nix +++ b/pkgs/development/libraries/openh264/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "openh264-${version}"; - version = "1.7.0"; + version = "1.8.0"; src = fetchFromGitHub { owner = "cisco"; repo = "openh264"; rev = "v${version}"; - sha256 = "0ywrqni05bh925ws5fmd24bm6h9n6z2wp1q19v545v06biiwr46a"; + sha256 = "1pl7hpk25nh7lcx1lbbv984gvnim0d6hxf4qfmrjjfjf6w37sjw4"; }; buildInputs = [ nasm ]; diff --git a/pkgs/development/libraries/openjpeg/2.x.nix b/pkgs/development/libraries/openjpeg/2.x.nix index d18c971dc112..77d9e5829a1a 100644 --- a/pkgs/development/libraries/openjpeg/2.x.nix +++ b/pkgs/development/libraries/openjpeg/2.x.nix @@ -5,4 +5,12 @@ callPackage ./generic.nix (args // rec { branch = "2.3"; revision = "v${version}"; sha256 = "08plxrnfl33sn2vh5nwbsngyv6b1sfpplvx881crm1v1ai10m2lz"; + + patches = [ + (fetchpatch { + name = "CVE-2018-7648.patch"; + url = "https://github.com/uclouvain/openjpeg/commit/cc3824767bde397fedb8a1ae4786a222ba860c8d.patch"; + sha256 = "1j5nxmlgyfkxldk2f1ij6h850xw45q3b5brxqa04dxsfsv8cdj5j"; + }) + ]; }) diff --git a/pkgs/development/libraries/openscenegraph/3.4.0.nix b/pkgs/development/libraries/openscenegraph/3.4.0.nix new file mode 100644 index 000000000000..8d0839041890 --- /dev/null +++ b/pkgs/development/libraries/openscenegraph/3.4.0.nix @@ -0,0 +1,39 @@ +{ stdenv, lib, fetchurl, cmake, pkgconfig, doxygen, unzip +, freetype, libjpeg, jasper, libxml2, zlib, gdal, curl, libX11 +, cairo, poppler, librsvg, libpng, libtiff, libXrandr +, xineLib, boost +, withApps ? false +, withSDL ? false, SDL +, withQt4 ? false, qt4 +}: + +stdenv.mkDerivation rec { + name = "openscenegraph-${version}"; + version = "3.4.0"; + + src = fetchurl { + url = "http://trac.openscenegraph.org/downloads/developer_releases/OpenSceneGraph-${version}.zip"; + sha256 = "03h4wfqqk7rf3mpz0sa99gy715cwpala7964z2npd8jxfn27swjw"; + }; + + nativeBuildInputs = [ pkgconfig cmake doxygen unzip ]; + + buildInputs = [ + freetype libjpeg jasper libxml2 zlib gdal curl libX11 + cairo poppler librsvg libpng libtiff libXrandr boost + xineLib + ] ++ lib.optional withSDL SDL + ++ lib.optional withQt4 qt4; + + enableParallelBuilding = true; + + cmakeFlags = lib.optional (!withApps) "-DBUILD_OSG_APPLICATIONS=OFF"; + + meta = with stdenv.lib; { + description = "A 3D graphics toolkit"; + homepage = http://www.openscenegraph.org/; + maintainers = [ maintainers.raskin ]; + platforms = platforms.linux; + license = "OpenSceneGraph Public License - free LGPL-based license"; + }; +} diff --git a/pkgs/development/libraries/openscenegraph/default.nix b/pkgs/development/libraries/openscenegraph/default.nix index cddc2038791e..9f5ef3ff68c8 100644 --- a/pkgs/development/libraries/openscenegraph/default.nix +++ b/pkgs/development/libraries/openscenegraph/default.nix @@ -27,13 +27,13 @@ stdenv.mkDerivation rec { name = "openscenegraph-${version}"; - version = "3.6.2"; + version = "3.6.3"; src = fetchFromGitHub { owner = "openscenegraph"; repo = "OpenSceneGraph"; - rev = "fb40a0d1db018ff39a08699a7f17f7eb6d949c36"; - sha256 = "03jk6lclyd4biniaw04w7j0z1spkm69f1c19i37b8v9x3zv1p1id"; + rev = "d011ca4e8d83549a3688bf6bb8cd468dd9684822"; + sha256 = "0h32z15sa8sbq276j0iib0n707m8bs4p5ji9z2ah411446paad9q"; }; nativeBuildInputs = [ pkgconfig cmake doxygen ]; diff --git a/pkgs/development/libraries/pcl/default.nix b/pkgs/development/libraries/pcl/default.nix index 9fb2e0b7fedb..14eff45e4a17 100644 --- a/pkgs/development/libraries/pcl/default.nix +++ b/pkgs/development/libraries/pcl/default.nix @@ -29,7 +29,6 @@ stdenv.mkDerivation rec { ++ stdenv.lib.optionals stdenv.isDarwin [ Cocoa AGL cf-private ]; cmakeFlags = stdenv.lib.optionals stdenv.isDarwin [ - "-DCMAKE_OSX_SYSROOT=" "-DCMAKE_OSX_DEPLOYMENT_TARGET=" "-DOPENGL_INCLUDE_DIR=${OpenGL}/Library/Frameworks" ]; diff --git a/pkgs/development/libraries/physics/yoda/default.nix b/pkgs/development/libraries/physics/yoda/default.nix index c86b0ed3d1c8..664d1fa601ee 100644 --- a/pkgs/development/libraries/physics/yoda/default.nix +++ b/pkgs/development/libraries/physics/yoda/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "yoda-${version}"; - version = "1.7.1"; + version = "1.7.3"; src = fetchurl { url = "https://www.hepforge.org/archive/yoda/YODA-${version}.tar.bz2"; - sha256 = "0yq20fnckf6h0a53ghxsgia6ikq71ch9a0w0khq188r7rlg9gmzd"; + sha256 = "0n40qii2ych5yfx6drj79b3rk29dvc3gysjqs719qgl26d3hkxpb"; }; pythonPath = []; # python wrapper support @@ -27,7 +27,7 @@ stdenv.mkDerivation rec { meta = { description = "Provides small set of data analysis (specifically histogramming) classes"; - license = stdenv.lib.licenses.gpl2; + license = stdenv.lib.licenses.gpl3; homepage = https://yoda.hepforge.org; platforms = stdenv.lib.platforms.unix; maintainers = with stdenv.lib.maintainers; [ veprbl ]; diff --git a/pkgs/development/libraries/postgis/default.nix b/pkgs/development/libraries/postgis/default.nix index 04fdeea1fa0b..37cf29c86581 100644 --- a/pkgs/development/libraries/postgis/default.nix +++ b/pkgs/development/libraries/postgis/default.nix @@ -16,7 +16,7 @@ ### NixOS - usage: ================== - services.postgresql.extraPlugins = [ (pkgs.postgis.override { postgresql = pkgs.postgresql95; }) ]; + services.postgresql.extraPlugins = [ (pkgs.postgis.override { postgresql = pkgs.postgresql_9_5; }) ]; ### important Postgis implementation details: diff --git a/pkgs/development/libraries/qjson/default.nix b/pkgs/development/libraries/qjson/default.nix index 29202396c058..a7077c69dd8d 100644 --- a/pkgs/development/libraries/qjson/default.nix +++ b/pkgs/development/libraries/qjson/default.nix @@ -13,8 +13,10 @@ stdenv.mkDerivation rec { buildInputs = [ cmake qt4 ]; - meta = { - maintainers = [ ]; + meta = with stdenv.lib; { + description = "Lightweight data-interchange format"; + homepage = http://qjson.sourceforge.net/; + license = licenses.lgpl21; inherit (qt4.meta) platforms; }; } diff --git a/pkgs/development/libraries/qoauth/default.nix b/pkgs/development/libraries/qoauth/default.nix index d09c0d9a6ce0..0d9ae21e87e3 100644 --- a/pkgs/development/libraries/qoauth/default.nix +++ b/pkgs/development/libraries/qoauth/default.nix @@ -21,9 +21,9 @@ stdenv.mkDerivation { NIX_CFLAGS_COMPILE = [ "-I${qca2-qt5}/include/Qca-qt5/QtCrypto" ]; NIX_LDFLAGS = [ "-lqca-qt5" ]; - meta = { + meta = with stdenv.lib; { description = "Qt library for OAuth authentication"; inherit (qt5.qtbase.meta) platforms; - maintainers = [ ]; + license = licenses.lgpl21; }; } diff --git a/pkgs/development/libraries/qrupdate/default.nix b/pkgs/development/libraries/qrupdate/default.nix index c8b01c460803..85e45d3fad03 100644 --- a/pkgs/development/libraries/qrupdate/default.nix +++ b/pkgs/development/libraries/qrupdate/default.nix @@ -34,7 +34,10 @@ stdenv.mkDerivation { buildInputs = [ gfortran openblas ]; - meta = { - platforms = stdenv.lib.platforms.unix; + meta = with stdenv.lib; { + description = "Library for fast updating of qr and cholesky decompositions"; + homepage = https://sourceforge.net/projects/qrupdate/; + license = licenses.gpl3; + platforms = platforms.unix; }; } diff --git a/pkgs/development/libraries/qt-3/default.nix b/pkgs/development/libraries/qt-3/default.nix index 0691f26b4712..95b82f8f3cff 100644 --- a/pkgs/development/libraries/qt-3/default.nix +++ b/pkgs/development/libraries/qt-3/default.nix @@ -84,7 +84,8 @@ stdenv.mkDerivation { passthru = {inherit mysqlSupport;}; - meta = { - platforms = stdenv.lib.platforms.linux; + meta = with stdenv.lib; { + license = with licenses; [ gpl2 qpl ]; + platforms = platforms.linux; }; } diff --git a/pkgs/development/libraries/qt-mobility/default.nix b/pkgs/development/libraries/qt-mobility/default.nix index 5cf49450422f..ae99035d2267 100644 --- a/pkgs/development/libraries/qt-mobility/default.nix +++ b/pkgs/development/libraries/qt-mobility/default.nix @@ -42,11 +42,12 @@ stdenv.mkDerivation rec { buildInputs = [ qt4 libX11 bluez perl ]; - meta = { + meta = with stdenv.lib; { description = "Qt Mobility"; homepage = http://qt.nokia.com/products/qt-addons/mobility; - maintainers = with stdenv.lib.maintainers; [qknight]; - platforms = with stdenv.lib.platforms; linux; + maintainers = [ maintainers.qknight ]; + platforms = platforms.linux; + license = with licenses; [ bsd3 fdl13 gpl3 lgpl21 ]; }; } diff --git a/pkgs/development/libraries/qtscriptgenerator/default.nix b/pkgs/development/libraries/qtscriptgenerator/default.nix index 040072cb463e..88591e880dee 100644 --- a/pkgs/development/libraries/qtscriptgenerator/default.nix +++ b/pkgs/development/libraries/qtscriptgenerator/default.nix @@ -43,6 +43,6 @@ stdenv.mkDerivation { description = "QtScript bindings generator"; homepage = https://code.qt.io/cgit/qt-labs/qtscriptgenerator.git/; inherit (qt4.meta) platforms; - maintainers = [ ]; + license = stdenv.lib.licenses.lgpl21; }; } diff --git a/pkgs/development/libraries/readline/5.x.nix b/pkgs/development/libraries/readline/5.x.nix index 9e7c5c1d4e3b..84062408d45c 100644 --- a/pkgs/development/libraries/readline/5.x.nix +++ b/pkgs/development/libraries/readline/5.x.nix @@ -11,8 +11,10 @@ stdenv.mkDerivation { propagatedBuildInputs = [ncurses]; patches = stdenv.lib.optional stdenv.isDarwin ./shobj-darwin.patch; - meta = { + + meta = with stdenv.lib; { branch = "5"; - platforms = stdenv.lib.platforms.unix; + platforms = platforms.unix; + license = licenses.gpl2; }; } diff --git a/pkgs/development/libraries/science/math/cudnn/default.nix b/pkgs/development/libraries/science/math/cudnn/default.nix index c89e9e4296cf..b41469c215e2 100644 --- a/pkgs/development/libraries/science/math/cudnn/default.nix +++ b/pkgs/development/libraries/science/math/cudnn/default.nix @@ -1,13 +1,11 @@ -{ callPackage, cudatoolkit_7, cudatoolkit_7_5, cudatoolkit_8, cudatoolkit_9_0, cudatoolkit_9 }: +{ callPackage, cudatoolkit_7, cudatoolkit_7_5, cudatoolkit_8, cudatoolkit_9_0, cudatoolkit_9_1, cudatoolkit_9_2, cudatoolkit_10_0 }: let generic = args: callPackage (import ./generic.nix (removeAttrs args ["cudatoolkit"])) { inherit (args) cudatoolkit; }; -in - -{ +in rec { cudnn_cudatoolkit_7 = generic rec { # Old URL is v4 instead of v4.0 for some reason... version = "4"; @@ -38,16 +36,34 @@ in }; cudnn_cudatoolkit_9_0 = generic rec { - version = "7.0.5"; + version = "7.3.0"; cudatoolkit = cudatoolkit_9_0; - srcName = "cudnn-${cudatoolkit.majorVersion}-linux-x64-v7.tgz"; - sha256 = "03mbv4m5lhwnc181xz8li067pjzzhxqbxgnrfc68dffm8xj0fghs"; + srcName = "cudnn-${cudatoolkit.majorVersion}-linux-x64-v7.3.0.29.tgz"; + sha256 = "16z4vgbcmbayk4hppz0xshgs3g07blkp4j25cxcjqyrczx1r0gs0"; }; - cudnn_cudatoolkit_9 = generic rec { - version = "7.0.5"; - cudatoolkit = cudatoolkit_9; - srcName = "cudnn-${cudatoolkit.majorVersion}-linux-x64-v7.tgz"; - sha256 = "1rfmdd2v47p83fm3sfyvik31gci0q17qs6kjng6mvcsd6akmvb8y"; + cudnn_cudatoolkit_9_1 = generic rec { + version = "7.1.3"; + cudatoolkit = cudatoolkit_9_1; + srcName = "cudnn-${cudatoolkit.majorVersion}-linux-x64-v7.1.tgz"; + sha256 = "0a0237gpr0p63s92njai0xvxmkbailzgfsvh7n9fnz0njhvnsqfx"; }; + + cudnn_cudatoolkit_9_2 = generic rec { + version = "7.2.1"; + cudatoolkit = cudatoolkit_9_2; + srcName = "cudnn-${cudatoolkit.majorVersion}-linux-x64-v7.2.1.38.tgz"; + sha256 = "1sf215wm6zgr17gs6sxfhw61b7a0qmcxiwhgy1b4nqdyxpqgay1y"; + }; + + cudnn_cudatoolkit_9 = cudnn_cudatoolkit_9_2; + + cudnn_cudatoolkit_10_0 = generic rec { + version = "7.3.1"; + cudatoolkit = cudatoolkit_10_0; + srcName = "cudnn-${cudatoolkit.majorVersion}-linux-x64-v7.3.1.20.tgz"; + sha256 = "1yp35mng4ym40g5rqp63dcpa6jg4q1pnjkspnhlakzzdy8is65af"; + }; + + cudnn_cudatoolkit_10 = cudnn_cudatoolkit_10_0; } diff --git a/pkgs/development/libraries/science/math/scalapack/default.nix b/pkgs/development/libraries/science/math/scalapack/default.nix index 83e177c66c18..3961374a9b11 100644 --- a/pkgs/development/libraries/science/math/scalapack/default.nix +++ b/pkgs/development/libraries/science/math/scalapack/default.nix @@ -1,11 +1,7 @@ -{ stdenv -, fetchurl -, gfortran -, cmake -, blas -, liblapack -, mpi -}: +{ stdenv, fetchurl, cmake, openssh +, gfortran, mpi, openblasCompat +} : + stdenv.mkDerivation rec { name = "scalapack-${version}"; @@ -16,12 +12,38 @@ stdenv.mkDerivation rec { sha256 = "0p1r61ss1fq0bs8ynnx7xq4wwsdvs32ljvwjnx6yxr8gd6pawx0c"; }; - buildInputs = [ cmake mpi liblapack blas gfortran ]; + nativeBuildInputs = [ cmake openssh ]; + buildInputs = [ mpi gfortran openblasCompat ]; + + enableParallelBuilding = true; + + doCheck = true; + + preConfigure = '' + cmakeFlagsArray+=( + -DBUILD_SHARED_LIBS=ON -DBUILD_STATIC_LIBS=OFF + -DLAPACK_LIBRARIES="-lopenblas" + -DBLAS_LIBRARIES="-lopenblas" + ) + ''; + + checkPhase = '' + # make sure the test starts even if we have less than 4 cores + export OMPI_MCA_rmaps_base_oversubscribe=1 + + # Run single threaded + export OMP_NUM_THREADS=1 + + export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:`pwd`/lib + export CTEST_OUTPUT_ON_FAILURE=1 + + make test + ''; meta = with stdenv.lib; { homepage = http://www.netlib.org/scalapack/; description = "Library of high-performance linear algebra routines for parallel distributed memory machines"; - license = licenses.bsdOriginal; + license = licenses.bsd3; platforms = platforms.all; maintainers = [ maintainers.costrouc ]; }; diff --git a/pkgs/development/libraries/silgraphite/graphite2.nix b/pkgs/development/libraries/silgraphite/graphite2.nix index dc3f4a118f6d..f795dfef9e4c 100644 --- a/pkgs/development/libraries/silgraphite/graphite2.nix +++ b/pkgs/development/libraries/silgraphite/graphite2.nix @@ -18,9 +18,10 @@ stdenv.mkDerivation rec { checkInputs = [ python ]; doCheck = false; # fails, probably missing something - meta = { + meta = with stdenv.lib; { description = "An advanced font engine"; - maintainers = [ stdenv.lib.maintainers.raskin ]; - platforms = stdenv.lib.platforms.unix; + maintainers = [ maintainers.raskin ]; + platforms = platforms.unix; + license = licenses.lgpl21; }; } diff --git a/pkgs/development/libraries/simgear/default.nix b/pkgs/development/libraries/simgear/default.nix index 28b96d17aa60..196fb59bb171 100644 --- a/pkgs/development/libraries/simgear/default.nix +++ b/pkgs/development/libraries/simgear/default.nix @@ -6,12 +6,12 @@ stdenv.mkDerivation rec { name = "simgear-${version}"; - version = "2017.3.1"; - shortVersion = "2017.3"; + version = "2018.2.2"; + shortVersion = "2018.2"; src = fetchurl { url = "mirror://sourceforge/flightgear/release-${shortVersion}/${name}.tar.bz2"; - sha256 = "1x71wvycs2bjgmmacswgk6091p65p46fr40mr7f4kcipnx88bq0f"; + sha256 = "f61576bc36aae36f350154749df1cee396763604c06b8a71c4b50452d9151ce5"; }; buildInputs = [ plib freeglut xproto libX11 libXext xextproto libXi inputproto @@ -28,4 +28,3 @@ stdenv.mkDerivation rec { license = licenses.lgpl2; }; } - diff --git a/pkgs/development/libraries/sofia-sip/default.nix b/pkgs/development/libraries/sofia-sip/default.nix index 9fe88b771be7..ca2ff666b7a5 100644 --- a/pkgs/development/libraries/sofia-sip/default.nix +++ b/pkgs/development/libraries/sofia-sip/default.nix @@ -11,7 +11,10 @@ stdenv.mkDerivation rec { buildInputs = [ glib openssl ]; nativeBuildInputs = [ pkgconfig ]; - meta = { - platforms = stdenv.lib.platforms.linux; + meta = with stdenv.lib; { + description = "Open-source SIP User-Agent library, compliant with the IETF RFC3261 specification"; + homepage = http://sofia-sip.sourceforge.net/; + platforms = platforms.linux; + license = licenses.lgpl2; }; } diff --git a/pkgs/development/libraries/t1lib/default.nix b/pkgs/development/libraries/t1lib/default.nix index 8a76e886b4f6..b8e7518cd332 100644 --- a/pkgs/development/libraries/t1lib/default.nix +++ b/pkgs/development/libraries/t1lib/default.nix @@ -30,7 +30,10 @@ stdenv.mkDerivation { postInstall = stdenv.lib.optional (!stdenv.isDarwin) "chmod +x $out/lib/*.so.*"; # ?? - meta = { - platforms = stdenv.lib.platforms.unix; + meta = with stdenv.lib; { + description = "A type 1 font rasterizer library for UNIX/X11"; + homepage = http://www.t1lib.org/; + license = with licenses; [ gpl2 lgpl2 ]; + platforms = platforms.unix; }; } diff --git a/pkgs/development/libraries/taglib-extras/default.nix b/pkgs/development/libraries/taglib-extras/default.nix index 0059243890d6..b667e6047400 100644 --- a/pkgs/development/libraries/taglib-extras/default.nix +++ b/pkgs/development/libraries/taglib-extras/default.nix @@ -14,7 +14,9 @@ stdenv.mkDerivation rec { sed -i -e 's/STRLESS/VERSION_LESS/g' cmake/modules/FindTaglib.cmake ''; - meta = { - platforms = stdenv.lib.platforms.unix; + meta = with stdenv.lib; { + description = "Additional taglib plugins"; + platforms = platforms.unix; + license = licenses.lgpl2; }; } diff --git a/pkgs/development/libraries/taglib-sharp/default.nix b/pkgs/development/libraries/taglib-sharp/default.nix index 6da524c23390..86006806baa0 100644 --- a/pkgs/development/libraries/taglib-sharp/default.nix +++ b/pkgs/development/libraries/taglib-sharp/default.nix @@ -7,7 +7,6 @@ stdenv.mkDerivation rec { src = fetchFromGitHub { owner = "mono"; repo = "taglib-sharp"; - rev = "taglib-sharp-${version}"; sha256 = "12pk4z6ag8w7kj6vzplrlasq5lwddxrww1w1ya5ivxrfki15h5cp"; }; @@ -21,6 +20,8 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "Library for reading and writing metadata in media files"; + homepage = https://github.com/mono/taglib-sharp; platforms = platforms.linux; + license = licenses.lgpl21; }; } diff --git a/pkgs/development/libraries/taglib/1.9.nix b/pkgs/development/libraries/taglib/1.9.nix index 1caa8a376fb1..99892a41fa42 100644 --- a/pkgs/development/libraries/taglib/1.9.nix +++ b/pkgs/development/libraries/taglib/1.9.nix @@ -15,9 +15,8 @@ stdenv.mkDerivation rec { meta = { homepage = http://developer.kde.org/~wheeler/taglib.html; repositories.git = git://github.com/taglib/taglib.git; - description = "A library for reading and editing the meta-data of several popular audio formats"; inherit (cmake.meta) platforms; - maintainers = [ ]; + license = with stdenv.lib.licenses; [ lgpl21 mpl11 ]; }; } diff --git a/pkgs/development/libraries/talloc/default.nix b/pkgs/development/libraries/talloc/default.nix index 77c3c6458ade..7c758d298357 100644 --- a/pkgs/development/libraries/talloc/default.nix +++ b/pkgs/development/libraries/talloc/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchurl, python, pkgconfig, readline, libxslt -, docbook_xsl, docbook_xml_dtd_42 +, docbook_xsl, docbook_xml_dtd_42, fixDarwinDylibNames }: stdenv.mkDerivation rec { @@ -10,13 +10,13 @@ stdenv.mkDerivation rec { sha256 = "1kk76dyav41ip7ddbbf04yfydb4jvywzi2ps0z2vla56aqkn11di"; }; - nativeBuildInputs = [ pkgconfig ]; + nativeBuildInputs = [ pkgconfig fixDarwinDylibNames ]; buildInputs = [ python readline libxslt docbook_xsl docbook_xml_dtd_42 ]; - preConfigure = '' - sed -i 's,#!/usr/bin/env python,#!${python}/bin/python,g' buildtools/bin/waf + prePatch = '' + patchShebangs buildtools/bin/waf ''; configureFlags = [ diff --git a/pkgs/development/libraries/tclap/default.nix b/pkgs/development/libraries/tclap/default.nix index a92c7b74ebf7..293baa492c56 100644 --- a/pkgs/development/libraries/tclap/default.nix +++ b/pkgs/development/libraries/tclap/default.nix @@ -8,9 +8,10 @@ stdenv.mkDerivation rec { sha256 = "0dsqvsgzam3mypj2ladn6v1yjq9zd47p3lg21jx6kz5azkkkn0gm"; }; - meta = { + meta = with stdenv.lib; { homepage = http://tclap.sourceforge.net/; description = "Templatized C++ Command Line Parser Library"; - platforms = stdenv.lib.platforms.all; + platforms = platforms.all; + license = licenses.mit; }; } diff --git a/pkgs/development/libraries/telepathy/farstream/default.nix b/pkgs/development/libraries/telepathy/farstream/default.nix index fae51aea477e..1247d9ffa843 100644 --- a/pkgs/development/libraries/telepathy/farstream/default.nix +++ b/pkgs/development/libraries/telepathy/farstream/default.nix @@ -12,7 +12,10 @@ stdenv.mkDerivation rec { propagatedBuildInputs = [ dbus-glib telepathy-glib farstream ]; nativeBuildInputs = [ pkgconfig ]; - meta = { - platforms = stdenv.lib.platforms.linux; + meta = with stdenv.lib; { + description = "GObject-based C library that uses Telepathy GLib, Farstream and GStreamer to handle the media streaming part of channels of type Call"; + homepage = https://telepathy.freedesktop.org/wiki/Components/Telepathy-Farstream/; + platforms = platforms.linux; + license = licenses.lgpl21; }; } diff --git a/pkgs/development/libraries/telepathy/glib/default.nix b/pkgs/development/libraries/telepathy/glib/default.nix index 9ca2481c3b01..ca6a4997abf4 100644 --- a/pkgs/development/libraries/telepathy/glib/default.nix +++ b/pkgs/development/libraries/telepathy/glib/default.nix @@ -22,8 +22,9 @@ stdenv.mkDerivation rec { passthru.python = python2; - meta = { + meta = with stdenv.lib; { homepage = https://telepathy.freedesktop.org; - platforms = stdenv.lib.platforms.unix; + platforms = platforms.unix; + license = with licenses; [ bsd2 bsd3 lgpl21Plus ]; }; } diff --git a/pkgs/development/libraries/tidyp/default.nix b/pkgs/development/libraries/tidyp/default.nix index ba95da77b72c..51dabbd2beb7 100644 --- a/pkgs/development/libraries/tidyp/default.nix +++ b/pkgs/development/libraries/tidyp/default.nix @@ -15,5 +15,6 @@ stdenv.mkDerivation rec { homepage = http://tidyp.com/; platforms = platforms.linux; maintainers = with maintainers; [ pSub ]; + license = licenses.bsd3; }; } diff --git a/pkgs/development/libraries/uriparser/default.nix b/pkgs/development/libraries/uriparser/default.nix index c716ae7f8dbb..03f8e20b38d0 100644 --- a/pkgs/development/libraries/uriparser/default.nix +++ b/pkgs/development/libraries/uriparser/default.nix @@ -1,16 +1,16 @@ -{ stdenv, fetchurl, cpptest, pkgconfig, doxygen, graphviz }: +{ stdenv, fetchurl, gtest, pkgconfig, doxygen, graphviz }: stdenv.mkDerivation rec { name = "uriparser-${version}"; - version = "0.8.6"; + version = "0.9.0"; # Release tarball differs from source tarball src = fetchurl { url = "https://github.com/uriparser/uriparser/releases/download/${name}/${name}.tar.bz2"; - sha256 = "0m2a5bf5b00ybagxmsa8mdj9mhc62vcm0qimy1ivfza1fbjsf287"; + sha256 = "0b2yagxzhq9ghpszci6a9xlqg0yl7vq9j5r8dwbar3nszqsfnrzc"; }; - nativeBuildInputs = [ pkgconfig cpptest doxygen graphviz ]; + nativeBuildInputs = [ pkgconfig gtest doxygen graphviz ]; doCheck = true; diff --git a/pkgs/development/libraries/v8/plv8_6_x.nix b/pkgs/development/libraries/v8/plv8_6_x.nix new file mode 100644 index 000000000000..8d2276def705 --- /dev/null +++ b/pkgs/development/libraries/v8/plv8_6_x.nix @@ -0,0 +1,187 @@ +# NOTE: this expression is NOT exported from the top-level of all-packages.nix, +# it is exclusively used by the 'plv8' PostgreSQL extension, which requires a +# very exact version. + +{ stdenv, lib, fetchgit, fetchFromGitHub, gn, ninja, python, glib, pkgconfig +, doCheck ? false +, snapshot ? true +}: + +let + arch = if stdenv.isAarch32 + then if stdenv.is64bit + then"arm64" + else "arm" + else if stdenv.is64bit + then"x64" + else "ia32"; + git_url = "https://chromium.googlesource.com"; + + # This data is from the DEPS file in the root of a V8 checkout + deps = { + "base/trace_event/common" = fetchgit { + url = "${git_url}/chromium/src/base/trace_event/common.git"; + rev = "0e9a47d74970bee1bbfc063c47215406f8918699"; + sha256 = "07rbzrlscp8adh4z86yl5jxdnvgkc3xs950xldpk318wf9i3bh6c"; + }; + "build" = fetchgit { + url = "${git_url}/chromium/src/build.git"; + rev = "9338ce52d0b9bcef34c38285fbd5023b62739fac"; + sha256 = "1s2sa8dy3waidsirjylc82ggb18l1108bczjc8z0v4ywyj4k0cvh"; + }; + "buildtools" = fetchgit { + url = "${git_url}/chromium/buildtools.git"; + rev = "505de88083136eefd056e5ee4ca0f01fe9b33de8"; + sha256 = "0vj216nhb803bggsl0hnyagj8njrm96pn8sim6xcnqb7nhz1vabw"; + }; + "test/benchmarks/data" = fetchgit { + url = "${git_url}/v8/deps/third_party/benchmarks.git"; + rev = "05d7188267b4560491ff9155c5ee13e207ecd65f"; + sha256 = "0ad2ay14bn67d61ks4dmzadfnhkj9bw28r4yjdjjyzck7qbnzchl"; + }; + "test/mozilla/data" = fetchgit { + url = "${git_url}/v8/deps/third_party/mozilla-tests.git"; + rev = "f6c578a10ea707b1a8ab0b88943fe5115ce2b9be"; + sha256 = "0rfdan76yfawqxbwwb35aa57b723j3z9fx5a2w16nls02yk2kqyn"; + }; + "test/test262/data" = fetchgit { + url = "${git_url}/external/github.com/tc39/test262.git"; + rev = "5d4c667b271a9b39d0de73aef5ffe6879c6f8811"; + sha256 = "0q9iwb2nkybf9np95wgf5m372aw2lhx9wlsw41a2a80kbkvb2kqg"; + }; + "test/test262/harness" = fetchgit { + url = "${git_url}/external/github.com/test262-utils/test262-harness-py.git"; + rev = "0f2acdd882c84cff43b9d60df7574a1901e2cdcd"; + sha256 = "00brj5avp43yamc92kinba2mg3a2x1rcd7wnm7z093l73idprvkp"; + }; + "test/wasm-js" = fetchgit { + url = "${git_url}/external/github.com/WebAssembly/spec.git"; + rev = "a7e226a92e660a3d5413cfea4269824f513259d2"; + sha256 = "0z3aybj3ykajwh2bv5fwd6pwqjjsq8dnwrqc2wncb6r9xcjwbgxp"; + }; + "testing/gtest" = fetchgit { + url = "${git_url}/external/github.com/google/googletest.git"; + rev = "6f8a66431cb592dad629028a50b3dd418a408c87"; + sha256 = "0bdba2lr6pg15bla9600zg0r0vm4lnrx0wqz84p376wfdxra24vw"; + }; + "third_party/icu" = fetchgit { + url = "${git_url}/chromium/deps/icu.git"; + rev = "741688ebf328da9adc52505248bf4e2ef868722c"; + sha256 = "02ifm18qjlrkn5nm2rxkf9yz9bdlyq7c65jfjndv63vi1drqh1r9"; + }; + "third_party/instrumented_libraries" = fetchgit { + url = "${git_url}/chromium/src/third_party/instrumented_libraries.git"; + rev = "28417458ac4dc79f68915079d0f283f682504cc0"; + sha256 = "1qf5c2946n37p843yriv7xawi6ss6samabghq43s49cgd4wq8dc3"; + }; + "third_party/jinja2" = fetchgit { + url = "${git_url}/chromium/src/third_party/jinja2.git"; + rev = "d34383206fa42d52faa10bb9931d6d538f3a57e0"; + sha256 = "0d9hyw0bvp3p0dbwy833cm9vdqxcam0qbm9jc561ynphddxlkmgd"; + }; + "third_party/markupsafe" = fetchgit { + url = "${git_url}/chromium/src/third_party/markupsafe.git"; + rev = "8f45f5cfa0009d2a70589bcda0349b8cb2b72783"; + sha256 = "168ppjmicfdh4i1l0l25s86mdbrz9fgxmiq1rx33x79mph41scfz"; + }; + "tools/clang" = fetchgit { + url = "${git_url}/chromium/src/tools/clang.git"; + rev = "8688d267571de76a56746324dcc249bf4232b85a"; + sha256 = "0krq4zz1vnwp064bm517gwr2napy18wyccdh8w5s4qgkjwwxd63s"; + }; + "tools/gyp" = fetchgit { + url = "${git_url}/external/gyp.git"; + rev = "d61a9397e668fa9843c4aa7da9e79460fe590bfb"; + sha256 = "1z081h72mjy285jb1kj5xd0pb4p12n9blvsimsavyn3ldmswv0r0"; + }; + "tools/luci-go" = fetchgit { + url = "${git_url}/chromium/src/tools/luci-go.git"; + rev = "45a8a51fda92e123619a69e7644d9c64a320b0c1"; + sha256 = "0r7736gqk7r0i7ig0b5ib10d9q8a8xzsmc0f0fbkm9k78v847vpj"; + }; + "tools/swarming_client" = fetchgit { + url = "${git_url}/infra/luci/client-py.git"; + rev = "4bd9152f8a975d57c972c071dfb4ddf668e02200"; + sha256 = "03zk91gzvqv01g1vbl8d7h8al7vs4ymrrdc8ipg9wpq52yh65smh"; + }; + }; + +in + +stdenv.mkDerivation rec { + name = "v8-${version}"; + version = "6.4.388.40"; + + inherit doCheck; + + src = fetchFromGitHub { + owner = "v8"; + repo = "v8"; + rev = version; + sha256 = "1lq239cgqyidrynz8g3wbdv70ymzv6s0ppad8s219gb3jnizm16a"; + }; + + postUnpack = '' + ${lib.concatStringsSep "\n" ( + lib.mapAttrsToList (n: v: '' + mkdir -p $sourceRoot/${n} + cp -r ${v}/* $sourceRoot/${n} + '') deps)} + ''; + + prePatch = '' + # use our gn, not the bundled one + sed -i -e 's#gn_path = .*#gn_path = "${gn}/bin/gn"#' tools/mb/mb.py + + # disable tests + if [ "$doCheck" = "" ]; then sed -i -e '/"test:gn_all",/d' BUILD.gn; fi + + # disable sysroot usage + chmod u+w build/config build/config/sysroot.gni + sed -i build/config/sysroot.gni \ + -e '/use_sysroot =/ { s#\(use_sysroot =\).*#\1 false#; :a n; /current_cpu/ { s/^/#/; ba }; }' + + # patch shebangs (/usr/bin/env) + patchShebangs tools/dev/v8gen.py + ''; + + configurePhase = '' + tools/dev/v8gen.py -vv ${arch}.release -- \ + is_component_build=true \ + ${if snapshot then "v8_use_external_startup_data=false" else "v8_use_snapshot=false"} \ + is_clang=false \ + linux_use_bundled_binutils=false \ + treat_warnings_as_errors=false \ + use_custom_libcxx=false \ + use_custom_libcxx_for_host=false + ''; + + nativeBuildInputs = [ gn ninja pkgconfig ]; + buildInputs = [ python glib ]; + + buildPhase = '' + ninja -C out.gn/${arch}.release/ + ''; + + enableParallelBuilding = true; + + installPhase = '' + install -vD out.gn/${arch}.release/d8 "$out/bin/d8" + install -vD out.gn/${arch}.release/mksnapshot "$out/bin/mksnapshot" + mkdir -p "$out/lib" + for f in libicui18n.so libicuuc.so libv8_libbase.so libv8_libplatform.so libv8.so; do + install -vD out.gn/${arch}.release/$f "$out/lib/$f" + done + install -vD out.gn/${arch}.release/icudtl.dat "$out/lib/icudtl.dat" + mkdir -p "$out/include" + cp -vr include/*.h "$out/include" + cp -vr include/libplatform "$out/include" + ''; + + meta = with lib; { + description = "Google's open source JavaScript engine"; + maintainers = with maintainers; [ cstrahan proglodyte ]; + platforms = platforms.linux; + license = licenses.bsd3; + }; +} diff --git a/pkgs/development/libraries/vtk/default.nix b/pkgs/development/libraries/vtk/default.nix index b85d76640cf0..afd29aeb0063 100644 --- a/pkgs/development/libraries/vtk/default.nix +++ b/pkgs/development/libraries/vtk/default.nix @@ -41,8 +41,6 @@ stdenv.mkDerivation rec { cmakeFlags = [ "-DCMAKE_C_FLAGS=-fPIC" "-DCMAKE_CXX_FLAGS=-fPIC" ] ++ optional (qtLib != null) [ "-DVTK_USE_QT:BOOL=ON" ] ++ optional stdenv.isDarwin [ "-DBUILD_TESTING:BOOL=OFF" - "-DCMAKE_OSX_SYSROOT=" - "-DCMAKE_OSX_DEPLOYMENT_TARGET=" "-DOPENGL_INCLUDE_DIR=${OpenGL}/Library/Frameworks" ]; postPatch = stdenv.lib.optionalString stdenv.isDarwin '' diff --git a/pkgs/development/libraries/webkitgtk/2.22.nix b/pkgs/development/libraries/webkitgtk/2.22.nix index 7eae5819daf1..71b3dc24fe21 100644 --- a/pkgs/development/libraries/webkitgtk/2.22.nix +++ b/pkgs/development/libraries/webkitgtk/2.22.nix @@ -15,7 +15,7 @@ assert stdenv.isDarwin -> !enableGtk2Plugins; with stdenv.lib; stdenv.mkDerivation rec { name = "webkitgtk-${version}"; - version = "2.22.2"; + version = "2.22.3"; meta = { description = "Web content rendering engine, GTK+ port"; @@ -28,7 +28,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://webkitgtk.org/releases/${name}.tar.xz"; - sha256 = "1flrbr8pzbrlwv09b4pmgh6vklw7jghd2lgrhcb72vl9s7a8fm1l"; + sha256 = "0wnddhm2bihmmkmi919lyxskvjk2wrzx6azkiypyjfwm08lm9zcx"; }; patches = optionals stdenv.isDarwin [ diff --git a/pkgs/development/libraries/wlroots/default.nix b/pkgs/development/libraries/wlroots/default.nix index c1f401d0badb..4aff60631834 100644 --- a/pkgs/development/libraries/wlroots/default.nix +++ b/pkgs/development/libraries/wlroots/default.nix @@ -71,11 +71,12 @@ in stdenv.mkDerivation rec { # screenshot output-layout multi-pointer rotation tablet touch pointer # simple mkdir -p $examples/bin - for binary in $(find ./examples -executable -type f | grep -vE '\.so'); do + cd ./examples + for binary in $(find . -executable -type f -printf '%P\n' | grep -vE '\.so'); do patchelf \ --set-rpath "$examples/lib:${stdenv.lib.makeLibraryPath buildInputs}" \ "$binary" - cp "$binary" $examples/bin/ + cp "$binary" "$examples/bin/wlroots-$binary" done ''; diff --git a/pkgs/development/libraries/xapian/default.nix b/pkgs/development/libraries/xapian/default.nix index f93f7ed87460..2d7289ca6647 100644 --- a/pkgs/development/libraries/xapian/default.nix +++ b/pkgs/development/libraries/xapian/default.nix @@ -11,13 +11,6 @@ let inherit sha256; }; - patches = stdenv.lib.optional (version == "1.4.7") [ - # fix notmuch build, see https://notmuchmail.org/faq/#index12h2 - # cannot fetchpatch this because base directory differs - # TODO: remove on next xapian update - ./fix-notmuch-tagging.patch - ]; - outputs = [ "out" "man" "doc" ]; buildInputs = [ libuuid zlib ]; @@ -43,5 +36,5 @@ let in { # xapian-ruby needs 1.2.22 as of 2017-05-06 xapian_1_2_22 = generic "1.2.22" "0zsji22n0s7cdnbgj0kpil05a6bgm5cfv0mvx12d8ydg7z58g6r6"; - xapian_1_4 = generic "1.4.7" "1lxmlds3v5s1gng9nk1rvmln1zcksrw5ds509y0glylwch5qmw0k"; + xapian_1_4 = generic "1.4.9" "1k7m7m9jld96k16ansfw2w3c354pvd8ibhnrb6dw012g06fw7sfd"; } diff --git a/pkgs/development/libraries/xapian/fix-notmuch-tagging.patch b/pkgs/development/libraries/xapian/fix-notmuch-tagging.patch deleted file mode 100644 index 6deae76d2aa7..000000000000 --- a/pkgs/development/libraries/xapian/fix-notmuch-tagging.patch +++ /dev/null @@ -1,31 +0,0 @@ -From f9e6f45b1c8f66bca8a3387f371b20d434b23a7d Mon Sep 17 00:00:00 2001 -From: Olly Betts <olly@survex.com> -Date: Thu, 26 Jul 2018 17:26:52 +1200 -Subject: [PATCH 1/1] Revert "Enable open_nearby_postlist for writable - databases" - -The amended check isn't conservative enough as there may be postlist -changes in the inverter while the table is unmodified. This breaks -testcase T150-tagging.sh in notmuch's testsuite, reported by David -Bremner. - -This reverts commit 5489fb2f838c0f0b0a593b4c17df282a93a1fe5a. ---- - xapian-core/backends/glass/glass_postlist.cc | 2 +- - 1 file changed, 1 insertion(+), 1 deletion(-) - -diff --git a/xapian-core/backends/glass/glass_postlist.cc b/xapian-core/backends/glass/glass_postlist.cc -index 80e578b85..a47f14a68 100644 ---- a/backends/glass/glass_postlist.cc -+++ b/backends/glass/glass_postlist.cc -@@ -759,7 +759,7 @@ GlassPostList::open_nearby_postlist(const std::string & term_, - (void)need_pos; - if (term_.empty()) - RETURN(NULL); -- if (!this_db.get() || this_db->postlist_table.is_modified()) -+ if (!this_db.get() || this_db->postlist_table.is_writable()) - RETURN(NULL); - RETURN(new GlassPostList(this_db, term_, cursor->clone())); - } --- -2.11.0 diff --git a/pkgs/development/libraries/xbase/default.nix b/pkgs/development/libraries/xbase/default.nix index 79f75abfd91c..3dd2cb5b874c 100644 --- a/pkgs/development/libraries/xbase/default.nix +++ b/pkgs/development/libraries/xbase/default.nix @@ -25,10 +25,10 @@ stdenv.mkDerivation { }) ]; - meta = { + meta = with stdenv.lib; { homepage = http://linux.techass.com/projects/xdb/; description = "C++ class library formerly known as XDB"; - platforms = stdenv.lib.platforms.linux; - maintainers = [ ]; + platforms = platforms.linux; + license = licenses.lgpl2; }; } diff --git a/pkgs/development/libraries/xine-lib/default.nix b/pkgs/development/libraries/xine-lib/default.nix index 69b5b95e7613..d86dac050731 100644 --- a/pkgs/development/libraries/xine-lib/default.nix +++ b/pkgs/development/libraries/xine-lib/default.nix @@ -26,9 +26,10 @@ stdenv.mkDerivation rec { enableParallelBuilding = true; - meta = { + meta = with stdenv.lib; { homepage = http://www.xine-project.org/; description = "A high-performance, portable and reusable multimedia playback engine"; - platforms = stdenv.lib.platforms.linux; + platforms = platforms.linux; + license = with licenses; [ gpl2 lgpl2 ]; }; } diff --git a/pkgs/development/misc/avr/binutils/default.nix b/pkgs/development/misc/avr/binutils/default.nix deleted file mode 100644 index 83ba93e63b76..000000000000 --- a/pkgs/development/misc/avr/binutils/default.nix +++ /dev/null @@ -1,22 +0,0 @@ -{ stdenv, fetchurl }: - -let - version = "2.31.1"; -in -stdenv.mkDerivation { - name = "avr-binutils-${version}"; - - src = fetchurl { - url = "mirror://gnu/binutils/binutils-${version}.tar.bz2"; - sha256 = "1l34hn1zkmhr1wcrgf0d4z7r3najxnw3cx2y2fk7v55zjlk3ik7z"; - }; - configureFlags = [ "--target=avr" "--enable-languages=c,c++" ]; - - meta = with stdenv.lib; { - description = "the GNU Binutils for AVR microcontrollers"; - homepage = http://www.gnu.org/software/binutils/; - license = licenses.gpl3Plus; - platforms = platforms.unix; - maintainers = with maintainers; [ mguentner ]; - }; -} diff --git a/pkgs/development/misc/avr/gcc/avrbinutils-path.patch b/pkgs/development/misc/avr/gcc/avrbinutils-path.patch deleted file mode 100644 index f0ec21b7589f..000000000000 --- a/pkgs/development/misc/avr/gcc/avrbinutils-path.patch +++ /dev/null @@ -1,15 +0,0 @@ -diff --git a/gcc/gcc-ar.c b/gcc/gcc-ar.c -index 838ebc2..3ac4ee7 100644 ---- a/gcc/gcc-ar.c -+++ b/gcc/gcc-ar.c -@@ -118,8 +118,8 @@ setup_prefixes (const char *exec_path) - dir_separator, NULL); - prefix_from_string (self_libexec_prefix, &target_path); - -- /* Add path as a last resort. */ -- prefix_from_env ("PATH", &path); -+ /* Add path to avrbinutils. */ -+ prefix_from_string ("@avrbinutils@/bin", &path); - } - - int diff --git a/pkgs/development/misc/avr/gcc/default.nix b/pkgs/development/misc/avr/gcc/default.nix deleted file mode 100644 index 5c9b56c99183..000000000000 --- a/pkgs/development/misc/avr/gcc/default.nix +++ /dev/null @@ -1,60 +0,0 @@ -{ stdenv, fetchurl, gmp, mpfr, libmpc, zlib, avrbinutils, texinfo }: - -let - version = "8.2.0"; -in -stdenv.mkDerivation { - - name = "avr-gcc-${version}"; - src = fetchurl { - url = "mirror://gcc/releases/gcc-${version}/gcc-${version}.tar.xz"; - sha256 = "10007smilswiiv2ymazr3b6x2i933c0ycxrr529zh4r6p823qv0r"; - }; - - patches = [ - ./avrbinutils-path.patch - ]; - - # avrbinutils-path.patch introduces a reference to @avrbinutils@, substitute - # it now. - postPatch = '' - substituteInPlace gcc/gcc-ar.c --subst-var-by avrbinutils ${avrbinutils} - ''; - - buildInputs = [ gmp mpfr libmpc zlib avrbinutils ]; - - nativeBuildInputs = [ texinfo ]; - - hardeningDisable = [ "format" ]; - - stripDebugList= [ "bin" "libexec" ]; - - enableParallelBuilding = true; - - configurePhase = '' - mkdir gcc-build - cd gcc-build - ../configure \ - --prefix=$out \ - --host=$CHOST \ - --build=$CHOST \ - --target=avr \ - --with-as=${avrbinutils}/bin/avr-as \ - --with-gnu-as \ - --with-gnu-ld \ - --with-ld=${avrbinutils}/bin/avr-ld \ - --with-system-zlib \ - --disable-install-libiberty \ - --disable-nls \ - --disable-libssp \ - --with-dwarf2 \ - --enable-languages=c,c++''; - - meta = with stdenv.lib; { - description = "GNU Compiler Collection, version ${version} for AVR microcontrollers"; - homepage = http://gcc.gnu.org; - license = licenses.gpl3Plus; - platforms = with platforms; linux ++ darwin; - maintainers = with maintainers; [ mguentner ]; - }; -} diff --git a/pkgs/development/misc/avr/libc/default.nix b/pkgs/development/misc/avr/libc/default.nix index 039846d5fcfb..ab9a696afb00 100644 --- a/pkgs/development/misc/avr/libc/default.nix +++ b/pkgs/development/misc/avr/libc/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, avrgcc, avrbinutils, automake, autoconf }: +{ stdenv, fetchurl, automake, autoconf }: let version = "2.0.0"; @@ -11,28 +11,21 @@ stdenv.mkDerivation { sha256 = "15svr2fx8j6prql2il2fc0ppwlv50rpmyckaxx38d3gxxv97zpdj"; }; - buildInputs = [ avrgcc avrbinutils automake autoconf ]; - configurePhase = '' - unset LD - unset AS - unset AR - unset CC - unset CXX - unset RANLIB - unset STRIP - - ./configure --prefix=$out --build=$(./config.guess) --host=avr - ''; + nativeBuildInputs = [ automake autoconf ]; # Make sure we don't strip the libraries in lib/gcc/avr. - stripDebugList= "bin"; + stripDebugList = "bin"; dontPatchELF = true; + passthru = { + incdir = "/avr/include"; + }; + meta = with stdenv.lib; { description = "a C runtime library for AVR microcontrollers"; homepage = http://savannah.nongnu.org/projects/avr-libc/; license = licenses.bsd3; - platforms = platforms.unix; + platforms = [ "avr-none" ]; maintainers = with maintainers; [ mguentner ]; }; } diff --git a/pkgs/development/misc/newlib/default.nix b/pkgs/development/misc/newlib/default.nix new file mode 100644 index 000000000000..693cfa093b08 --- /dev/null +++ b/pkgs/development/misc/newlib/default.nix @@ -0,0 +1,35 @@ +{ stdenv, fetchurl, buildPackages }: + +let version = "3.0.0"; +in stdenv.mkDerivation { + name = "newlib-${version}"; + src = fetchurl { + url = "ftp://sourceware.org/pub/newlib/newlib-${version}.tar.gz"; + sha256 = "0chka3szh50krcz2dcxcsr1v1i000jylwnsrp2pgrrblxqsn6mn8"; + }; + + depsBuildBuild = [ buildPackages.stdenv.cc ]; + + # newlib expects CC to build for build platform, not host platform + preConfigure = '' + export CC=cc + ''; + + configurePlatforms = [ "build" "target" ]; + configureFlags = [ + "--host=${stdenv.buildPlatform.config}" + + "--disable-newlib-supplied-syscalls" + "--disable-nls" + "--enable-newlib-io-long-long" + "--enable-newlib-register-fini" + "--enable-newlib-retargetable-locking" + ]; + + dontDisableStatic = true; + + passthru = { + incdir = "/${stdenv.targetPlatform.config}/include"; + libdir = "/${stdenv.targetPlatform.config}/lib"; + }; +} diff --git a/pkgs/development/misc/qmk_firmware/default.nix b/pkgs/development/misc/qmk_firmware/default.nix new file mode 100644 index 000000000000..0a7b4fd9d9a7 --- /dev/null +++ b/pkgs/development/misc/qmk_firmware/default.nix @@ -0,0 +1,27 @@ +{ stdenv, fetchFromGitHub +, avrgcc, avrbinutils +, gcc-arm-embedded, binutils-arm-embedded +, teensy-loader-cli, dfu-programmer, dfu-util }: + +let version = "0.6.144"; + +in stdenv.mkDerivation { + name = "qmk_firmware-${version}"; + src = fetchFromGitHub { + owner = "qmk"; + repo = "qmk_firmware"; + rev = version; + sha256 = "0m71f9w32ksqjkrwhqwhr74q5v3pr38bihjyb9ks0k5id0inhrjn"; + fetchSubmodules = true; + }; + buildFlags = "all:default"; + NIX_CFLAGS_COMPILE = "-Wno-error"; + nativeBuildInputs = [ + avrgcc + avrbinutils + gcc-arm-embedded + teensy-loader-cli + dfu-programmer + dfu-util + ]; +} diff --git a/pkgs/development/misc/stm32/betaflight/default.nix b/pkgs/development/misc/stm32/betaflight/default.nix index 0c601c7773cc..fbe48803f2db 100644 --- a/pkgs/development/misc/stm32/betaflight/default.nix +++ b/pkgs/development/misc/stm32/betaflight/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub -, gcc-arm-embedded, python2 +, gcc-arm-embedded, binutils-arm-embedded, python2 , skipTargets ? [ # These targets do not build, for the reasons listed, along with the last version checked. # Probably all of the issues with these targets need to be addressed upstream. @@ -24,14 +24,17 @@ in stdenv.mkDerivation rec { sha256 = "1wyp23p876xbfi9z6gm4xn1nwss3myvrjjjq9pd3s0vf5gkclkg5"; }; - buildInputs = [ - gcc-arm-embedded + nativeBuildInputs = [ + gcc-arm-embedded binutils-arm-embedded python2 ]; postPatch = '' sed -ri "s/REVISION.*=.*git log.*/REVISION = ${builtins.substring 0 10 src.rev}/" Makefile # Simulate abbrev'd rev. sed -ri "s/binary hex/hex/" Makefile # No need for anything besides .hex + + substitutateInPlace Makefile \ + --replace "--specs=nano.specs" "" ''; enableParallelBuilding = true; @@ -58,7 +61,6 @@ in stdenv.mkDerivation rec { homepage = https://github.com/betaflight/betaflight; license = licenses.gpl3; maintainers = with maintainers; [ elitak ]; - platforms = [ "i686-linux" "x86_64-linux" ]; }; } diff --git a/pkgs/development/misc/stm32/inav/default.nix b/pkgs/development/misc/stm32/inav/default.nix index cb9cc80d3252..102b1eb8048d 100644 --- a/pkgs/development/misc/stm32/inav/default.nix +++ b/pkgs/development/misc/stm32/inav/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub -, gcc-arm-embedded, ruby +, gcc-arm-embedded, binutils-arm-embedded, ruby }: let @@ -17,8 +17,8 @@ in stdenv.mkDerivation rec { sha256 = "15zai8qf43b06fmws1sbkmdgip51zp7gkfj7pp9b6gi8giarzq3y"; }; - buildInputs = [ - gcc-arm-embedded + nativeBuildInputs = [ + gcc-arm-embedded binutils-arm-embedded ruby ]; @@ -26,6 +26,9 @@ in stdenv.mkDerivation rec { sed -ri "s/REVISION.*=.*shell git.*/REVISION = ${builtins.substring 0 10 src.rev}/" Makefile # Simulate abbrev'd rev. sed -ri "s/-j *[0-9]+//" Makefile # Eliminate parallel build args in submakes sed -ri "s/binary hex/hex/" Makefile # No need for anything besides .hex + + substitutateInPlace Makefile \ + --replace "--specs=nano.specs" "" ''; enableParallelBuilding = true; @@ -50,7 +53,6 @@ in stdenv.mkDerivation rec { homepage = https://inavflight.github.io; license = licenses.gpl3; maintainers = with maintainers; [ elitak ]; - platforms = [ "i686-linux" "x86_64-linux" ]; }; } diff --git a/pkgs/development/mobile/androidenv/addon.xml b/pkgs/development/mobile/androidenv/addon.xml index 1bc1d110db16..68792038d000 100644 --- a/pkgs/development/mobile/androidenv/addon.xml +++ b/pkgs/development/mobile/androidenv/addon.xml @@ -1,6 +1,6 @@ <?xml version="1.0" ?> <sdk:sdk-addon xmlns:sdk="http://schemas.android.com/sdk/android/addon/7" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> - <!--Generated on 2017-09-08 08:19:28.153828 with ADRT.--> + <!--Generated on 2018-09-27 12:07:52.862255 with ADRT.--> <sdk:license id="android-sdk-license" type="text">Terms and Conditions This is the Android Software Development Kit License Agreement @@ -35,7 +35,7 @@ This is the Android Software Development Kit License Agreement 3.3 You agree that Google or third parties own all legal right, title and interest in and to the SDK, including any Intellectual Property Rights that subsist in the SDK. "Intellectual Property Rights" means any and all rights under patent law, copyright law, trade secret law, trademark law, and any and all other proprietary rights. Google reserves all rights not expressly granted to you. -3.4 You may not use the SDK for any purpose not expressly permitted by the License Agreement. Except to the extent required by applicable third party licenses, you may not: (a) copy (except for backup purposes), modify, adapt, redistribute, decompile, reverse engineer, disassemble, or create derivative works of the SDK or any part of the SDK; or (b) load any part of the SDK onto a mobile handset or any other hardware device except a personal computer, combine any part of the SDK with other software, or distribute any software or device incorporating a part of the SDK. +3.4 You may not use the SDK for any purpose not expressly permitted by the License Agreement. Except to the extent required by applicable third party licenses, you may not copy (except for backup purposes), modify, adapt, redistribute, decompile, reverse engineer, disassemble, or create derivative works of the SDK or any part of the SDK. 3.5 Use, reproduction and distribution of components of the SDK licensed under an open source software license are governed solely by the terms of that open source software license and not the License Agreement. @@ -587,7 +587,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>3</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:49 2016.--> + <!--Built on: Sat May 19 22:41:19 2018.--> <sdk:size>34908058</sdk:size> <sdk:checksum type="sha1">1f92abf3a76be66ae8032257fc7620acbd2b2e3a</sdk:checksum> <sdk:url>google_apis-3-r03.zip</sdk:url> @@ -614,7 +614,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:49 2016.--> + <!--Built on: Sun Jun 3 14:03:04 2018.--> <sdk:size>42435735</sdk:size> <sdk:checksum type="sha1">9b6e86d8568558de4d606a7debc4f6049608dbd0</sdk:checksum> <sdk:url>google_apis-4_r02.zip</sdk:url> @@ -641,7 +641,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:51 2016.--> + <!--Built on: Tue Jun 5 17:50:33 2018.--> <sdk:size>49123776</sdk:size> <sdk:checksum type="sha1">46eaeb56b645ee7ffa24ede8fa17f3df70db0503</sdk:checksum> <sdk:url>google_apis-5_r01.zip</sdk:url> @@ -668,7 +668,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:51 2016.--> + <!--Built on: Sun Jun 10 12:37:49 2018.--> <sdk:size>53382941</sdk:size> <sdk:checksum type="sha1">5ff545d96e031e09580a6cf55713015c7d4936b2</sdk:checksum> <sdk:url>google_apis-6_r01.zip</sdk:url> @@ -695,7 +695,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:52 2016.--> + <!--Built on: Wed May 30 22:32:20 2018.--> <sdk:size>53691339</sdk:size> <sdk:checksum type="sha1">2e7f91e0fe34fef7f58aeced973c6ae52361b5ac</sdk:checksum> <sdk:url>google_apis-7_r01.zip</sdk:url> @@ -722,7 +722,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:52 2016.--> + <!--Built on: Mon Jun 11 03:39:55 2018.--> <sdk:size>59505020</sdk:size> <sdk:checksum type="sha1">3079958e7ec87222cac1e6b27bc471b27bf2c352</sdk:checksum> <sdk:url>google_apis-8_r02.zip</sdk:url> @@ -749,7 +749,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:50 2016.--> + <!--Built on: Wed May 23 15:52:14 2018.--> <sdk:size>63401546</sdk:size> <sdk:checksum type="sha1">78664645a1e9accea4430814f8694291a7f1ea5d</sdk:checksum> <sdk:url>google_apis-9_r02.zip</sdk:url> @@ -776,7 +776,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:52 2016.--> + <!--Built on: Tue May 29 03:55:38 2018.--> <sdk:size>65781578</sdk:size> <sdk:checksum type="sha1">cc0711857c881fa7534f90cf8cc09b8fe985484d</sdk:checksum> <sdk:url>google_apis-10_r02.zip</sdk:url> @@ -807,7 +807,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:54 2016.--> + <!--Built on: Thu Jun 14 15:13:30 2018.--> <sdk:size>83477179</sdk:size> <sdk:checksum type="sha1">5eab5e81addee9f3576d456d205208314b5146a5</sdk:checksum> <sdk:url>google_apis-11_r01.zip</sdk:url> @@ -834,7 +834,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:51 2016.--> + <!--Built on: Mon Jun 11 10:52:20 2018.--> <sdk:size>86099835</sdk:size> <sdk:checksum type="sha1">e9999f4fa978812174dfeceec0721c793a636e5d</sdk:checksum> <sdk:url>google_apis-12_r01.zip</sdk:url> @@ -865,7 +865,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:54 2016.--> + <!--Built on: Sun May 27 03:09:43 2018.--> <sdk:size>88615525</sdk:size> <sdk:checksum type="sha1">3b153edd211c27dc736c893c658418a4f9041417</sdk:checksum> <sdk:url>google_apis-13_r01.zip</sdk:url> @@ -896,7 +896,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:53 2016.--> + <!--Built on: Wed Jun 13 22:44:43 2018.--> <sdk:size>106533714</sdk:size> <sdk:checksum type="sha1">f8eb4d96ad0492b4c0db2d7e4f1a1a3836664d39</sdk:checksum> <sdk:url>google_apis-14_r02.zip</sdk:url> @@ -925,7 +925,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>3</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:54 2016.--> + <!--Built on: Fri Jun 15 19:37:58 2018.--> <sdk:size>106624396</sdk:size> <sdk:checksum type="sha1">d0d2bf26805eb271693570a1aaec33e7dc3f45e9</sdk:checksum> <sdk:url>google_apis-15_r03.zip</sdk:url> @@ -958,7 +958,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:54 2016.--> + <!--Built on: Sun Jun 10 20:07:39 2018.--> <sdk:size>127341982</sdk:size> <sdk:checksum type="sha1">ee6acf1b01020bfa8a8e24725dbc4478bee5e792</sdk:checksum> <sdk:url>google_apis-16_r04.zip</sdk:url> @@ -991,7 +991,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:55 2016.--> + <!--Built on: Wed May 30 17:17:51 2018.--> <sdk:size>137231243</sdk:size> <sdk:checksum type="sha1">a076be0677f38df8ca5536b44dfb411a0c808c4f</sdk:checksum> <sdk:url>google_apis-17_r04.zip</sdk:url> @@ -1024,7 +1024,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:54 2016.--> + <!--Built on: Sun May 27 23:13:56 2018.--> <sdk:size>143195183</sdk:size> <sdk:checksum type="sha1">6109603409debdd40854d4d4a92eaf8481462c8b</sdk:checksum> <sdk:url>google_apis-18_r04.zip</sdk:url> @@ -1057,7 +1057,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>20</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 04:16:31 2016.--> + <!--Built on: Sat Jun 2 14:21:02 2018.--> <sdk:size>147081</sdk:size> <sdk:checksum type="sha1">5b933abe830b2f25b4c0f171d45e9e0651e56311</sdk:checksum> <sdk:url>google_apis-19_r20.zip</sdk:url> @@ -1090,7 +1090,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Sep 8 15:11:39 2016.--> + <!--Built on: Fri Jun 1 04:12:18 2018.--> <sdk:size>154865</sdk:size> <sdk:checksum type="sha1">31361c2868f27343ee917fbd259c1463821b6145</sdk:checksum> <sdk:url>google_apis-24_r1.zip</sdk:url> @@ -1123,7 +1123,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Apr 25 23:37:40 2017.--> + <!--Built on: Tue Jun 12 20:09:06 2018.--> <sdk:size>154871</sdk:size> <sdk:checksum type="sha1">550e83eea9513ab11c44919ac6da54b36084a9f3</sdk:checksum> <sdk:url>google_apis-25_r1.zip</sdk:url> @@ -1156,7 +1156,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:45 2016.--> + <!--Built on: Mon Jun 11 05:08:59 2018.--> <sdk:size>179499</sdk:size> <sdk:checksum type="sha1">66a754efb24e9bb07cc51648426443c7586c9d4a</sdk:checksum> <sdk:url>google_apis-21_r01.zip</sdk:url> @@ -1189,7 +1189,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:45 2016.--> + <!--Built on: Fri Jun 15 06:11:24 2018.--> <sdk:size>179259</sdk:size> <sdk:checksum type="sha1">5def0f42160cba8acff51b9c0c7e8be313de84f5</sdk:checksum> <sdk:url>google_apis-22_r01.zip</sdk:url> @@ -1222,7 +1222,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:45 2016.--> + <!--Built on: Sun Jun 10 08:57:09 2018.--> <sdk:size>179900</sdk:size> <sdk:checksum type="sha1">04c5cc1a7c88967250ebba9561d81e24104167db</sdk:checksum> <sdk:url>google_apis-23_r01.zip</sdk:url> @@ -1256,7 +1256,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:54 2016.--> + <!--Built on: Sun May 27 03:16:19 2018.--> <sdk:size>78266751</sdk:size> <sdk:checksum type="sha1">92128a12e7e8b0fb5bac59153d7779b717e7b840</sdk:checksum> <sdk:url>google_tv-12_r02.zip</sdk:url> @@ -1278,7 +1278,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 05:06:54 2016.--> + <!--Built on: Tue Jun 19 05:04:20 2018.--> <sdk:size>87721879</sdk:size> <sdk:checksum type="sha1">b73f7c66011ac8180b44aa4e83b8d78c66ea9a09</sdk:checksum> <sdk:url>google_tv-13_r01.zip</sdk:url> @@ -1303,7 +1303,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Wed Mar 22 18:05:52 2017.--> + <!--Built on: Mon Jun 11 04:51:54 2018.--> <sdk:size>355529608</sdk:size> <sdk:checksum type="sha1">a0d22beacc106a6977321f2b07d692ce4979e96a</sdk:checksum> <sdk:url>android_m2repository_r47.zip</sdk:url> @@ -1323,7 +1323,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Wed Sep 6 06:12:47 2017.--> + <!--Built on: Mon Jun 11 11:10:27 2018.--> <sdk:size>215426029</sdk:size> <sdk:checksum type="sha1">05086add9e3a0eb1b67111108d7757a4337c3f10</sdk:checksum> <sdk:url>google_m2repository_gms_v11_3_rc05_wear_2_0_5.zip</sdk:url> @@ -1343,7 +1343,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Apr 5 11:38:56 2016.--> + <!--Built on: Sun Jun 10 01:20:16 2018.--> <sdk:size>75109</sdk:size> <sdk:checksum type="sha1">355e8dc304a92a5616db235af8ee7bd554356254</sdk:checksum> <sdk:url>market_licensing-r02.zip</sdk:url> @@ -1364,7 +1364,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Apr 5 11:38:59 2016.--> + <!--Built on: Sun Jun 17 19:31:02 2018.--> <sdk:size>110201</sdk:size> <sdk:checksum type="sha1">5305399dc1a56814e86b8459ce24871916f78b8c</sdk:checksum> <sdk:url>market_apk_expansion-r03.zip</sdk:url> @@ -1386,7 +1386,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Apr 5 11:39:02 2016.--> + <!--Built on: Sun May 27 10:44:16 2018.--> <sdk:size>5265389</sdk:size> <sdk:checksum type="sha1">92558dbc380bba3d55d0ec181167fb05ce7c79d9</sdk:checksum> <sdk:url>google_play_services_3265130_r12.zip</sdk:url> @@ -1401,16 +1401,16 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:path>google_play_services_froyo</sdk:path> </sdk:extra> <sdk:extra> - <!--Generated from bid:164902609, branch:perforce--> + <!--Generated from bid:189640690, branch:perforce--> <sdk:revision> - <sdk:major>44</sdk:major> + <sdk:major>49</sdk:major> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Aug 10 14:27:42 2017.--> - <sdk:size>13796755</sdk:size> - <sdk:checksum type="sha1">d2bb583a3f62b068d448df10544c1852d910526f</sdk:checksum> - <sdk:url>google_play_services_v12_1_rc11.zip</sdk:url> + <!--Built on: Mon Jun 11 08:08:54 2018.--> + <sdk:size>15456884</sdk:size> + <sdk:checksum type="sha1">f95bf19634e2ab0430923247fe2c50246432d2e9</sdk:checksum> + <sdk:url>google_play_services_v16_1_rc09.zip</sdk:url> </sdk:archive> </sdk:archives> <sdk:uses-license ref="android-sdk-license"/> @@ -1428,7 +1428,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Apr 5 11:39:08 2016.--> + <!--Built on: Thu Jun 7 01:53:27 2018.--> <sdk:size>8682859</sdk:size> <sdk:checksum type="sha1">dc8a2ed2fbd7246d4caf9ab10ffe7749dc35d1cc</sdk:checksum> <sdk:url>usb_driver_r11-windows.zip</sdk:url> @@ -1444,28 +1444,6 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:path>usb_driver</sdk:path> </sdk:extra> <sdk:extra> - <!--Generated from bid:53928043, branch:perforce--> - <sdk:revision> - <sdk:major>5</sdk:major> - </sdk:revision> - <sdk:archives> - <sdk:archive> - <!--Built on: Tue Apr 5 11:39:11 2016.--> - <sdk:size>436654</sdk:size> - <sdk:checksum type="sha1">bd2ac5ce7127070ac3229003eb69cfb806628ac9</sdk:checksum> - <sdk:url>play_billing_r05.zip</sdk:url> - </sdk:archive> - </sdk:archives> - <sdk:uses-license ref="android-sdk-license"/> - <sdk:vendor-id>google</sdk:vendor-id> - <sdk:vendor-display>Google Inc.</sdk:vendor-display> - <sdk:description>Google Play Billing files and sample code</sdk:description> - <sdk:desc-url>http://developer.android.com/google/play/billing/index.html</sdk:desc-url> - <sdk:name-display>Google Play Billing Library</sdk:name-display> - <sdk:path>play_billing</sdk:path> - <sdk:old-paths>market_billing</sdk:old-paths> - </sdk:extra> - <sdk:extra> <!--Generated from bid:45484492, branch:perforce--> <sdk:obsolete/> <sdk:revision> @@ -1473,7 +1451,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Apr 5 11:39:14 2016.--> + <!--Built on: Thu Jun 7 11:48:51 2018.--> <sdk:size>704512</sdk:size> <sdk:checksum type="sha1">0102859d9575baa0bf4fd5eb422af2ad0fe6cb82</sdk:checksum> <sdk:url>GoogleAdMobAdsSdkAndroid-6.4.1.zip</sdk:url> @@ -1495,7 +1473,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Apr 5 11:39:17 2016.--> + <!--Built on: Tue Jun 5 05:29:27 2018.--> <sdk:size>211432</sdk:size> <sdk:checksum type="sha1">dc14026bf0ce78315cb5dd00552607de0894de83</sdk:checksum> <sdk:url>GoogleAnalyticsAndroid_2.0beta5.zip</sdk:url> @@ -1516,7 +1494,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Apr 5 11:39:20 2016.--> + <!--Built on: Thu May 31 20:21:33 2018.--> <sdk:size>4055193</sdk:size> <sdk:checksum type="sha1">13f3a3b2670a5fc04a7342861644be9a01b07e38</sdk:checksum> <sdk:url>webdriver_r02.zip</sdk:url> @@ -1538,7 +1516,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Apr 5 11:39:23 2016.--> + <!--Built on: Sun May 27 10:27:10 2018.--> <sdk:size>5901400</sdk:size> <sdk:checksum type="sha1">ad066fd0dc7fc99d8aadac09c65a3c2519fbc7bf</sdk:checksum> <sdk:url>gcm_r03.zip</sdk:url> @@ -1559,7 +1537,7 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Apr 5 11:39:26 2016.--> + <!--Built on: Tue Jun 5 14:06:56 2018.--> <sdk:size>2167286</sdk:size> <sdk:checksum type="sha1">4fb5344e34e8faab4db18af07dace44c50db26a7</sdk:checksum> <sdk:url>simulator_r01.zip</sdk:url> @@ -1581,21 +1559,21 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Apr 5 11:39:34 2016.--> + <!--Built on: Sat Jun 16 20:44:31 2018.--> <sdk:size>1346009</sdk:size> <sdk:checksum type="sha1">202a6e1b3009a0eb815f8c672d2d5b3717de6169</sdk:checksum> <sdk:url>desktop-head-unit-linux_r01.1.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Tue Apr 5 11:39:35 2016.--> + <!--Built on: Tue Jun 12 06:56:07 2018.--> <sdk:size>2375533</sdk:size> <sdk:checksum type="sha1">8179cbb3914493ebc5eb65b731cba061582f2e84</sdk:checksum> <sdk:url>desktop-head-unit-macosx_r01.1.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Tue Apr 5 11:39:34 2016.--> + <!--Built on: Tue Jun 12 13:47:09 2018.--> <sdk:size>2691901</sdk:size> <sdk:checksum type="sha1">99c4a7172d73673552119347bc24c58b47da177b</sdk:checksum> <sdk:url>desktop-head-unit-windows_r01.1.zip</sdk:url> @@ -1611,26 +1589,26 @@ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS& <sdk:path>auto</sdk:path> </sdk:extra> <sdk:extra> - <!--Generated from bid:155747253, branch:perforce--> + <!--Generated from bid:214678223, branch:perforce--> <sdk:revision> <sdk:major>1</sdk:major> - <sdk:minor>0</sdk:minor> + <sdk:minor>5</sdk:minor> <sdk:micro>0</sdk:micro> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu May 11 08:10:37 2017.--> - <sdk:size>450468876</sdk:size> - <sdk:checksum type="sha1">50074a0f0312ee1d0d81d2cddc3d84a8a9e97a53</sdk:checksum> - <sdk:url>aiasdk-1.0.0.zip</sdk:url> + <!--Built on: Wed Sep 26 15:20:22 2018.--> + <sdk:size>33351418</sdk:size> + <sdk:checksum type="sha1">6c282b9c686e819fe7f5ac8f2249d2479acb63b4</sdk:checksum> + <sdk:url>iasdk-1.5.0-1538000167.zip</sdk:url> </sdk:archive> </sdk:archives> <sdk:uses-license ref="android-sdk-license"/> <sdk:vendor-id>google</sdk:vendor-id> <sdk:vendor-display>Google Inc.</sdk:vendor-display> - <sdk:description>Android Instant Apps Development SDK</sdk:description> - <sdk:desc-url>https://developer.android.com/topic/instant-apps/index.html</sdk:desc-url> - <sdk:name-display>Instant Apps Development SDK</sdk:name-display> + <sdk:description>Google Play Instant Development SDK</sdk:description> + <sdk:desc-url>https://developer.android.com/topic/google-play-instant/</sdk:desc-url> + <sdk:name-display>Google Play Instant Development SDK</sdk:name-display> <sdk:path>instantapps</sdk:path> </sdk:extra> </sdk:sdk-addon> diff --git a/pkgs/development/mobile/androidenv/addons.nix b/pkgs/development/mobile/androidenv/addons.nix index ab5d570a3273..1a8e2d32a4bb 100644 --- a/pkgs/development/mobile/androidenv/addons.nix +++ b/pkgs/development/mobile/androidenv/addons.nix @@ -296,8 +296,8 @@ in google_play_services = buildGoogleApis { name = "google_play_services"; src = fetchurl { - url = https://dl.google.com/android/repository/google_play_services_v12_1_rc11.zip; - sha1 = "d2bb583a3f62b068d448df10544c1852d910526f"; + url = https://dl.google.com/android/repository/google_play_services_v16_1_rc09.zip; + sha1 = "f95bf19634e2ab0430923247fe2c50246432d2e9"; }; meta = { description = "Google Play services client library and sample code"; @@ -308,8 +308,8 @@ in instant_apps = buildGoogleApis { name = "instant_apps_sdk"; src = fetchurl { - url = https://dl.google.com/android/repository/aiasdk-1.0.0.zip; - sha1 = "50074a0f0312ee1d0d81d2cddc3d84a8a9e97a53"; + url = https://dl.google.com/android/repository/iasdk-1.5.0-1538000167.zip; + sha1 = "6c282b9c686e819fe7f5ac8f2249d2479acb63b4"; }; meta = { description = "Android Instant Apps Development SDK"; @@ -317,4 +317,5 @@ in }; }; + } diff --git a/pkgs/development/mobile/androidenv/androidndk.nix b/pkgs/development/mobile/androidenv/androidndk.nix index 072a6dc3168e..23ae4378dc68 100644 --- a/pkgs/development/mobile/androidenv/androidndk.nix +++ b/pkgs/development/mobile/androidenv/androidndk.nix @@ -89,6 +89,16 @@ let do wrapProgram "$(pwd)/$i" --prefix PATH : "${runtime_paths}" done + + ${stdenv.lib.optionalString (stdenv.hostPlatform.system == "x86_64-linux") '' + for i in ${pkg_path}/prebuilt/linux-x86_64/bin/* + do + if ! isELF $i; then continue; fi + patchelf --set-interpreter ${stdenv.cc.libc.out}/lib/ld-linux-x86-64.so.2 $i + patchelf --set-rpath ${stdenv.cc.cc.lib}/lib64 $i + done + ''} + # make some executables available in PATH mkdir -pv ${bin_path} for i in \ diff --git a/pkgs/development/mobile/androidenv/androidsdk.nix b/pkgs/development/mobile/androidenv/androidsdk.nix index 5f61f25d54ee..a463adaf731f 100644 --- a/pkgs/development/mobile/androidenv/androidsdk.nix +++ b/pkgs/development/mobile/androidenv/androidsdk.nix @@ -4,10 +4,18 @@ , freetype, fontconfig, glib, gtk2, atk, file, jdk, coreutils, libpulseaudio, dbus , zlib, glxinfo, xkeyboardconfig , includeSources +, licenseAccepted }: -{ platformVersions, abiVersions, useGoogleAPIs, useExtraSupportLibs ? false +{ platformVersions, abiVersions, useGoogleAPIs, buildToolsVersions ? [], useExtraSupportLibs ? false , useGooglePlayServices ? false, useInstantApps ? false }: +if !licenseAccepted then throw '' + You must accept the Android Software Development Kit License Agreement at + https://developer.android.com/studio/terms + by setting nixpkgs config option 'android_sdk.accept_license = true;' + '' +else assert licenseAccepted; + let inherit (stdenv.lib) makeLibraryPath; googleRepository = let version = "gms_v9_rc41_wear_2_0_rc6"; @@ -20,16 +28,16 @@ in stdenv.mkDerivation rec { name = "android-sdk-${version}"; - version = "25.2.5"; + version = "26.1.1"; src = if (stdenv.hostPlatform.system == "i686-linux" || stdenv.hostPlatform.system == "x86_64-linux") then fetchurl { - url = "https://dl.google.com/android/repository/tools_r${version}-linux.zip"; - sha256 = "0gnk49pkwy4m0nqwm1xnf3w4mfpi9w0kk7841xlawpwbkj0icxap"; + url = "https://dl.google.com/android/repository/sdk-tools-linux-4333796.zip"; + sha256 = "1yfy0qqxz1ixpsci1pizls1nrncmi8p16wcb9rimdn4q3mdfxzwj"; } else if stdenv.hostPlatform.system == "x86_64-darwin" then fetchurl { - url = "http://dl.google.com/android/repository/tools_r${version}-macosx.zip"; - sha256 = "0yg7wjmyw70xsh8k4hgbqb5rilam2a94yc8dwbh7fjwqcmpxgwqb"; + url = "https://dl.google.com/android/repository/sdk-tools-darwin-4333796.zip"; + sha256 = "0gl5c30m40kx0vvrpbaa8cw8wq2vb89r14hgzb1df4qgpic97cpc"; } else throw "platform not ${stdenv.hostPlatform.system} supported!"; @@ -39,7 +47,7 @@ stdenv.mkDerivation rec { unpackFile $src cd tools - for f in android traceview draw9patch hierarchyviewer monitor ddms screenshot2 uiautomatorviewer monkeyrunner jobb lint + for f in monitor bin/monkeyrunner bin/uiautomatorviewer do sed -i -e "s|/bin/ls|${coreutils}/bin/ls|" "$f" done @@ -54,24 +62,6 @@ stdenv.mkDerivation rec { patchelf --set-rpath ${stdenv_32bit.cc.cc.lib}/lib $i done - ${stdenv.lib.optionalString (stdenv.hostPlatform.system == "x86_64-linux") '' - for i in bin64/{mkfs.ext4,fsck.ext4,e2fsck,tune2fs,resize2fs} - do - patchelf --set-interpreter ${stdenv.cc.libc.out}/lib/ld-linux-x86-64.so.2 $i - patchelf --set-rpath ${stdenv.cc.cc.lib}/lib64 $i - done - ''} - - ${stdenv.lib.optionalString (stdenv.hostPlatform.system == "x86_64-linux") '' - # We must also patch the 64-bit emulator instances, if needed - - for i in emulator emulator64-arm emulator64-mips emulator64-x86 emulator64-crash-service emulator-check qemu/linux-x86_64/qemu-system-* - do - patchelf --set-interpreter ${stdenv.cc.libc.out}/lib/ld-linux-x86-64.so.2 $i - patchelf --set-rpath ${stdenv.cc.cc.lib}/lib64 $i - done - ''} - # The following scripts used SWT and wants to dynamically load some GTK+ stuff. # Creating these wrappers ensure that they can be found: @@ -79,22 +69,18 @@ stdenv.mkDerivation rec { --prefix PATH : ${jdk}/bin \ --prefix LD_LIBRARY_PATH : ${makeLibraryPath [ glib gtk2 libXtst ]} - wrapProgram `pwd`/uiautomatorviewer \ - --prefix PATH : ${jdk}/bin \ - --prefix LD_LIBRARY_PATH : ${stdenv.lib.makeLibraryPath [ glib gtk2 libXtst ]} - - wrapProgram `pwd`/hierarchyviewer \ + wrapProgram `pwd`/bin/uiautomatorviewer \ --prefix PATH : ${jdk}/bin \ --prefix LD_LIBRARY_PATH : ${stdenv.lib.makeLibraryPath [ glib gtk2 libXtst ]} # The emulators need additional libraries, which are dynamically loaded => let's wrap them ${stdenv.lib.optionalString (stdenv.hostPlatform.system == "x86_64-linux") '' - for i in emulator emulator64-arm emulator64-mips emulator64-x86 emulator64-crash-service + for i in emulator emulator-check do wrapProgram `pwd`/$i \ --prefix PATH : ${stdenv.lib.makeBinPath [ file glxinfo ]} \ - --suffix LD_LIBRARY_PATH : `pwd`/lib64:`pwd`/lib64/qt/lib:${makeLibraryPath [ stdenv.cc.cc libX11 libxcb libXau libXdmcp libXext libGLU_combined alsaLib zlib libpulseaudio dbus.lib ]} \ + --suffix LD_LIBRARY_PATH : `pwd`/lib:${makeLibraryPath [ stdenv.cc.cc libX11 libxcb libXau libXdmcp libXext libGLU_combined alsaLib zlib libpulseaudio dbus.lib ]} \ --suffix QT_XKB_CONFIG_ROOT : ${xkeyboardconfig}/share/X11/xkb done ''} @@ -134,9 +120,17 @@ stdenv.mkDerivation rec { cd .. ln -s ${platformTools}/platform-tools - ln -s ${buildTools}/build-tools ln -s ${support}/support + mkdir -p build-tools + cd build-tools + + ${stdenv.lib.concatMapStrings + (v: "ln -s ${builtins.getAttr "v${builtins.replaceStrings ["."] ["_"] v}" buildTools}/build-tools/*") + (if (builtins.length buildToolsVersions) == 0 then platformVersions else buildToolsVersions)} + + cd .. + # Symlink required Google API add-ons mkdir -p add-ons @@ -245,6 +239,14 @@ stdenv.mkDerivation rec { fi done + for i in $out/libexec/tools/bin/* + do + if [ ! -d $i ] && [ -x $i ] + then + ln -sf $i $out/bin/$(basename $i) + fi + done + for i in $out/libexec/platform-tools/* do if [ ! -d $i ] && [ -x $i ] @@ -260,6 +262,11 @@ stdenv.mkDerivation rec { ln -sf $i $out/bin/$(basename $i) fi done + + wrapProgram $out/bin/sdkmanager \ + --set JAVA_HOME ${jdk} + + yes | ANDROID_SDK_HOME=$(mktemp -d) $out/bin/sdkmanager --licenses || true ''; buildInputs = [ unzip makeWrapper ]; diff --git a/pkgs/development/mobile/androidenv/build-tools-srcs-linux.nix b/pkgs/development/mobile/androidenv/build-tools-srcs-linux.nix new file mode 100644 index 000000000000..3c2960755e7b --- /dev/null +++ b/pkgs/development/mobile/androidenv/build-tools-srcs-linux.nix @@ -0,0 +1,376 @@ + +# This file is generated from generate-tools.sh. DO NOT EDIT. +# Execute generate-tools.sh or fetch.sh to update the file. +{ fetchurl }: + +{ + + v17 = { + version = "17.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r17-linux.zip; + sha1 = "2c2872bc3806aabf16a12e3959c2183ddc866e6d"; + }; + }; + + v18_0_1 = { + version = "18.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r18.0.1-linux.zip; + sha1 = "f11618492b0d2270c332325d45d752d3656a9640"; + }; + }; + + v18_1_0 = { + version = "18.1.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r18.1-linux.zip; + sha1 = "f314a0599e51397f0886fe888b50dd98f2f050d8"; + }; + }; + + v18_1_1 = { + version = "18.1.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r18.1.1-linux.zip; + sha1 = "68c9acbfc0cec2d51b19efaed39831a17055d998"; + }; + }; + + v19 = { + version = "19.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r19-linux.zip; + sha1 = "55c1a6cf632e7d346f0002b275ec41fd3137fd83"; + }; + }; + + v19_0_1 = { + version = "19.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r19.0.1-linux.zip; + sha1 = "18d2312dc4368858914213087f4e61445aca4517"; + }; + }; + + v19_0_2 = { + version = "19.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r19.0.2-linux.zip; + sha1 = "a03a6bdea0091aea32e1b35b90a7294c9f04e3dd"; + }; + }; + + v19_0_3 = { + version = "19.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r19.0.3-linux.zip; + sha1 = "c2d6055478e9d2d4fba476ee85f99181ddd1160c"; + }; + }; + + v19_1_0 = { + version = "19.1.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r19.1-linux.zip; + sha1 = "1ff20ac15fa47a75d00346ec12f180d531b3ca89"; + }; + }; + + v20 = { + version = "20.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r20-linux.zip; + sha1 = "b688905526a5584d1327a662d871a635ff502758"; + }; + }; + + v21 = { + version = "21.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r21-linux.zip; + sha1 = "4933328fdeecbd554a29528f254f4993468e1cf4"; + }; + }; + + v21_0_1 = { + version = "21.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r21.0.1-linux.zip; + sha1 = "e573069eea3e5255e7a65bedeb767f4fd0a5f49a"; + }; + }; + + v21_0_2 = { + version = "21.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r21.0.2-linux.zip; + sha1 = "e1236ab8897b62b57414adcf04c132567b2612a5"; + }; + }; + + v21_1_0 = { + version = "21.1.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r21.1-linux.zip; + sha1 = "b7455e543784d52a8925f960bc880493ed1478cb"; + }; + }; + + v21_1_1 = { + version = "21.1.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r21.1.1-linux.zip; + sha1 = "1c712ee3a1ba5a8b0548f9c32f17d4a0ddfd727d"; + }; + }; + + v21_1_2 = { + version = "21.1.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r21.1.2-linux.zip; + sha1 = "5e35259843bf2926113a38368b08458735479658"; + }; + }; + + v22 = { + version = "22.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r22-linux.zip; + sha1 = "a8a1619dd090e44fac957bce6842e62abf87965b"; + }; + }; + + v22_0_1 = { + version = "22.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r22.0.1-linux.zip; + sha1 = "da8b9c5c3ede39298e6cf0283c000c2ee9029646"; + }; + }; + + v23 = { + version = "23.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r23-linux.zip; + sha1 = "c1d6209212b01469f80fa804e0c1d39a06bc9060"; + }; + }; + + v23_0_1 = { + version = "23.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r23.0.1-linux.zip; + sha1 = "b6ba7c399d5fa487d95289d8832e4ad943aed556"; + }; + }; + + v23_0_2 = { + version = "23.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r23.0.2-linux.zip; + sha1 = "8a9f2b37f6fcf7a9fa784dc21aeaeb41bbb9f2c3"; + }; + }; + + v23_0_3 = { + version = "23.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r23.0.3-linux.zip; + sha1 = "368f2600feac7e9b511b82f53d1f2240ae4a91a3"; + }; + }; + + v24 = { + version = "24.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r24-linux.zip; + sha1 = "c6271c4d78a5612ea6c7150688bcd5b7313de8d1"; + }; + }; + + v24_0_1 = { + version = "24.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r24.0.1-linux.zip; + sha1 = "84f18c392919a074fcbb9b1d967984e6b2fef8b4"; + }; + }; + + v24_0_2 = { + version = "24.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r24.0.2-linux.zip; + sha1 = "f199a7a788c3fefbed102eea34d6007737b803cf"; + }; + }; + + v24_0_3 = { + version = "24.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r24.0.3-linux.zip; + sha1 = "9e8cc49d66e03fa1a8ecc1ac3e58f1324f5da304"; + }; + }; + + v25 = { + version = "25.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r25-linux.zip; + sha1 = "f2bbda60403e75cabd0f238598c3b4dfca56ea44"; + }; + }; + + v25_0_1 = { + version = "25.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r25.0.1-linux.zip; + sha1 = "ff063d252ab750d339f5947d06ff782836f22bac"; + }; + }; + + v25_0_2 = { + version = "25.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r25.0.2-linux.zip; + sha1 = "ff953c0177e317618fda40516f3e9d95fd43c7ae"; + }; + }; + + v25_0_3 = { + version = "25.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r25.0.3-linux.zip; + sha1 = "db95f3a0ae376534d4d69f4cdb6fad20649f3509"; + }; + }; + + v26 = { + version = "26.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r26-linux.zip; + sha1 = "1cbe72929876f8a872ab1f1b1040a9f720261f59"; + }; + }; + + v26_rc1 = { + version = "26.0.0-rc1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r26-rc1-linux.zip; + sha1 = "8cd6388dc96db2d7a49d06159cf990d3bbc78d04"; + }; + }; + + v26_rc2 = { + version = "26.0.0-rc2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r26-rc2-linux.zip; + sha1 = "629bbd8d2e415bf64871fb0b4c0540fd6d0347a0"; + }; + }; + + v26_0_1 = { + version = "26.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r26.0.1-linux.zip; + sha1 = "5378c2c78091b414d0eac40a6bd37f2faa31a365"; + }; + }; + + v26_0_2 = { + version = "26.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r26.0.2-linux.zip; + sha1 = "5b2b7b66c7bf2151f2af183b5b50a17808850592"; + }; + }; + + v26_0_3 = { + version = "26.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r26.0.3-linux.zip; + sha1 = "8a2e6c1bcd845844523a68aa17e5442f0dce328c"; + }; + }; + + v27 = { + version = "27.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r27-linux.zip; + sha1 = "28542332ba97cf4a08c3eddfcf5edd70e3cf1260"; + }; + }; + + v27_0_1 = { + version = "27.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r27.0.1-linux.zip; + sha1 = "7f4eedb1077ef948b848040dcd15de9e8a759f4a"; + }; + }; + + v27_0_2 = { + version = "27.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r27.0.2-linux.zip; + sha1 = "b687ddf6be84f11607871138aad32cf857d0b837"; + }; + }; + + v27_0_3 = { + version = "27.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r27.0.3-linux.zip; + sha1 = "d85e7a6320eddffe7eeace3437605079dac938ca"; + }; + }; + + v28 = { + version = "28.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r28-linux.zip; + sha1 = "d9f8a754d833ccd334f56fcc6089c5925cd82abb"; + }; + }; + + v28_rc1 = { + version = "28.0.0-rc1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r28-rc1-linux.zip; + sha1 = "1601977fae25fd478bcfaa0481ca5ea3c609d840"; + }; + }; + + v28_rc2 = { + version = "28.0.0-rc2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r28-rc2-linux.zip; + sha1 = "efe9c0dde0646a07544c864276390ca6e96b24dc"; + }; + }; + + v28_0_1 = { + version = "28.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r28.0.1-linux.zip; + sha1 = "ee70dfa1fccb58b37cebc9544830511f36a137a0"; + }; + }; + + v28_0_2 = { + version = "28.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r28.0.2-linux.zip; + sha1 = "b4492209810a3fd48deaa982f9852fef12433d55"; + }; + }; + + v28_0_3 = { + version = "28.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r28.0.3-linux.zip; + sha1 = "ea6f2f7103cd9da9ff0bdf6e37fbbba548fa4165"; + }; + }; + +} diff --git a/pkgs/development/mobile/androidenv/build-tools-srcs-macosx.nix b/pkgs/development/mobile/androidenv/build-tools-srcs-macosx.nix new file mode 100644 index 000000000000..1e15aa7c873c --- /dev/null +++ b/pkgs/development/mobile/androidenv/build-tools-srcs-macosx.nix @@ -0,0 +1,376 @@ + +# This file is generated from generate-tools.sh. DO NOT EDIT. +# Execute generate-tools.sh or fetch.sh to update the file. +{ fetchurl }: + +{ + + v17 = { + version = "17.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r17-macosx.zip; + sha1 = "602ee709be9dbb8f179b1e4075148a57f9419930"; + }; + }; + + v18_0_1 = { + version = "18.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r18.0.1-macosx.zip; + sha1 = "d84f5692fb44d60fc53e5b2507cebf9f24626902"; + }; + }; + + v18_1_0 = { + version = "18.1.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r18.1-macosx.zip; + sha1 = "16ddb299b8b43063e5bb3387ec17147c5053dfd8"; + }; + }; + + v18_1_1 = { + version = "18.1.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r18.1.1-macosx.zip; + sha1 = "a9d9d37f6ddf859e57abc78802a77aaa166e48d4"; + }; + }; + + v19 = { + version = "19.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r19-macosx.zip; + sha1 = "86ec1c12db1bc446b7bcaefc5cc14eb361044e90"; + }; + }; + + v19_0_1 = { + version = "19.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r19.0.1-macosx.zip; + sha1 = "efaf50fb19a3edb8d03efbff76f89a249ad2920b"; + }; + }; + + v19_0_2 = { + version = "19.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r19.0.2-macosx.zip; + sha1 = "145bc43065d45f756d99d87329d899052b9a9288"; + }; + }; + + v19_0_3 = { + version = "19.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r19.0.3-macosx.zip; + sha1 = "651cf8754373b2d52e7f6aab2c52eabffe4e9ea4"; + }; + }; + + v19_1_0 = { + version = "19.1.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r19.1-macosx.zip; + sha1 = "0d11aae3417de1efb4b9a0e0a7855904a61bcec1"; + }; + }; + + v20 = { + version = "20.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r20-macosx.zip; + sha1 = "1240f629411c108a714c4ddd756937c7fab93f83"; + }; + }; + + v21 = { + version = "21.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r21-macosx.zip; + sha1 = "9bef7989b51436bd4e5114d8a0330359f077cbfa"; + }; + }; + + v21_0_1 = { + version = "21.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r21.0.1-macosx.zip; + sha1 = "b60c8f9b810c980abafa04896706f3911be1ade7"; + }; + }; + + v21_0_2 = { + version = "21.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r21.0.2-macosx.zip; + sha1 = "f17471c154058f3734729ef3cc363399b1cd3de1"; + }; + }; + + v21_1_0 = { + version = "21.1.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r21.1-macosx.zip; + sha1 = "df619356c2359aa5eacdd48699d15b335d9bd246"; + }; + }; + + v21_1_1 = { + version = "21.1.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r21.1.1-macosx.zip; + sha1 = "836a146eab0504aa9387a5132e986fe7c7381571"; + }; + }; + + v21_1_2 = { + version = "21.1.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r21.1.2-macosx.zip; + sha1 = "e7c906b4ba0eea93b32ba36c610dbd6b204bff48"; + }; + }; + + v22 = { + version = "22.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r22-macosx.zip; + sha1 = "af95429b24088d704bc5db9bd606e34ac1b82c0d"; + }; + }; + + v22_0_1 = { + version = "22.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r22.0.1-macosx.zip; + sha1 = "53dad7f608e01d53b17176ba11165acbfccc5bbf"; + }; + }; + + v23 = { + version = "23.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r23-macosx.zip; + sha1 = "90ba6e716f7703a236cd44b2e71c5ff430855a03"; + }; + }; + + v23_0_1 = { + version = "23.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r23.0.1-macosx.zip; + sha1 = "d96ec1522721e9a179ae2c591c99f75d31d39718"; + }; + }; + + v23_0_2 = { + version = "23.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r23.0.2-macosx.zip; + sha1 = "482c4cbceef8ff58aefd92d8155a38610158fdaf"; + }; + }; + + v23_0_3 = { + version = "23.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r23.0.3-macosx.zip; + sha1 = "fbc98cd303fd15a31d472de6c03bd707829f00b0"; + }; + }; + + v24 = { + version = "24.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r24-macosx.zip; + sha1 = "97fc4ed442f23989cc488d02c1d1de9bdde241de"; + }; + }; + + v24_0_1 = { + version = "24.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r24.0.1-macosx.zip; + sha1 = "5c6457fcdfa07724fb086d8ff4e8316fc0742848"; + }; + }; + + v24_0_2 = { + version = "24.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r24.0.2-macosx.zip; + sha1 = "8bb8fc575477491d5957de743089df412de55cda"; + }; + }; + + v24_0_3 = { + version = "24.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r24.0.3-macosx.zip; + sha1 = "a01c15f1b105c34595681075e1895d58b3fff48c"; + }; + }; + + v25 = { + version = "25.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r25-macosx.zip; + sha1 = "273c5c29a65cbed00e44f3aa470bbd7dce556606"; + }; + }; + + v25_0_1 = { + version = "25.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r25.0.1-macosx.zip; + sha1 = "7bf7f22d7d48ef20b6ab0e3d7a2912e5c088340f"; + }; + }; + + v25_0_2 = { + version = "25.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r25.0.2-macosx.zip; + sha1 = "12a5204bb3b6e39437535469fde7ddf42da46b16"; + }; + }; + + v25_0_3 = { + version = "25.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r25.0.3-macosx.zip; + sha1 = "160d2fefb5ce68e443427fc30a793a703b63e26e"; + }; + }; + + v26 = { + version = "26.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r26-macosx.zip; + sha1 = "d01a1aeca03747245f1f5936b3cb01759c66d086"; + }; + }; + + v26_rc1 = { + version = "26.0.0-rc1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r26-rc1-macosx.zip; + sha1 = "5c5a1de7d5f4f000d36ae349229fe0be846d6137"; + }; + }; + + v26_rc2 = { + version = "26.0.0-rc2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r26-rc2-macosx.zip; + sha1 = "cb1eb738a1f7003025af267a9b8cc2d259533c70"; + }; + }; + + v26_0_1 = { + version = "26.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r26.0.1-macosx.zip; + sha1 = "cbde59de198916b390777dd0227921bfa2120832"; + }; + }; + + v26_0_2 = { + version = "26.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r26.0.2-macosx.zip; + sha1 = "d9ed7c7f149ce38be5dc08979aea8acec1459ca0"; + }; + }; + + v26_0_3 = { + version = "26.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r26.0.3-macosx.zip; + sha1 = "5bb90ed935d99e5bc90686f43b852e68c5ad40df"; + }; + }; + + v27 = { + version = "27.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r27-macosx.zip; + sha1 = "fb4e8d7e6b8d29a77090e34024077a80458d5ae1"; + }; + }; + + v27_0_1 = { + version = "27.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r27.0.1-macosx.zip; + sha1 = "1edd07bfdbadd95652d093040e16d858f7489594"; + }; + }; + + v27_0_2 = { + version = "27.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r27.0.2-macosx.zip; + sha1 = "6d5d9cf2a47877f273f4b742b19e712a051a31be"; + }; + }; + + v27_0_3 = { + version = "27.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r27.0.3-macosx.zip; + sha1 = "61d9fb18790c68d66ff73bf1e7ad56bc1f1eef2d"; + }; + }; + + v28 = { + version = "28.0.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r28-macosx.zip; + sha1 = "72088d32d1d82cc3c2cf7cf6618b6130c0c84ade"; + }; + }; + + v28_rc1 = { + version = "28.0.0-rc1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r28-rc1-macosx.zip; + sha1 = "2c77821967a2330b7b227072d0b1c02ef19fe2fc"; + }; + }; + + v28_rc2 = { + version = "28.0.0-rc2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r28-rc2-macosx.zip; + sha1 = "0d0314b353589feb10e528b44c5a685b6658d797"; + }; + }; + + v28_0_1 = { + version = "28.0.1"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r28.0.1-macosx.zip; + sha1 = "aeef42ad953f1630dd6f5d71eefdc0b825211462"; + }; + }; + + v28_0_2 = { + version = "28.0.2"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r28.0.2-macosx.zip; + sha1 = "c10dd5a7825578622fb362a8a34f76eb3ba0c0a9"; + }; + }; + + v28_0_3 = { + version = "28.0.3"; + src = fetchurl { + url = https://dl.google.com/android/repository/build-tools_r28.0.3-macosx.zip; + sha1 = "f8c333a2991b1ab05a671bc6248b78e00edcd83a"; + }; + }; + +} diff --git a/pkgs/development/mobile/androidenv/build-tools.nix b/pkgs/development/mobile/androidenv/build-tools.nix index 85e604bd3f44..b362dc2dca5c 100644 --- a/pkgs/development/mobile/androidenv/build-tools.nix +++ b/pkgs/development/mobile/androidenv/build-tools.nix @@ -1,56 +1,53 @@ -{stdenv, stdenv_32bit, fetchurl, unzip, zlib_32bit, ncurses_32bit, file, zlib, ncurses}: - -stdenv.mkDerivation rec { - version = "26.0.2"; - name = "android-build-tools-r${version}"; - src = if (stdenv.hostPlatform.system == "i686-linux" || stdenv.hostPlatform.system == "x86_64-linux") - then fetchurl { - url = "https://dl.google.com/android/repository/build-tools_r${version}-linux.zip"; - sha256 = "1kii880bwhjkc343zwx1ysxyisxhczrwhphnxbwsgi45mjgq8lm7"; - } - else if stdenv.hostPlatform.system == "x86_64-darwin" then fetchurl { - url = "https://dl.google.com/android/repository/build-tools_r${version}-macosx.zip"; - sha256 = "1x0ycprl6hgsm23kck5ind7x00hzydc5k3h3ch4a13407xbpvzvx"; - } - else throw "System ${stdenv.hostPlatform.system} not supported!"; - - buildCommand = '' - mkdir -p $out/build-tools - cd $out/build-tools - unzip $src - mv android-* ${version} - - ${stdenv.lib.optionalString (stdenv.hostPlatform.system == "i686-linux" || stdenv.hostPlatform.system == "x86_64-linux") - '' - cd ${version} - - ln -s ${ncurses.out}/lib/libncurses.so.5 `pwd`/lib64/libtinfo.so.5 - - find . -type f -print0 | while IFS= read -r -d "" file - do - type=$(file "$file") - ## Patch 64-bit binaries - if grep -q "ELF 64-bit" <<< "$type" - then - if grep -q "interpreter" <<< "$type" +{stdenv, lib, stdenv_32bit, fetchurl, unzip, zlib_32bit, ncurses_32bit, file, zlib, ncurses, coreutils, buildToolsSources}: + +let buildBuildTools = name: { version, src }: + stdenv.mkDerivation rec { + inherit version src; + name = "android-build-tools-r${version}"; + buildCommand = '' + mkdir -p $out/build-tools + cd $out/build-tools + unzip $src + mv android-* ${version} + + cd ${version} + + for f in $(grep -Rl /bin/ls .); do + sed -i -e "s|/bin/ls|${coreutils}/bin/ls|" "$f" + done + + ${stdenv.lib.optionalString (stdenv.hostPlatform.system == "i686-linux" || stdenv.hostPlatform.system == "x86_64-linux") + '' + + ln -s ${ncurses.out}/lib/libncurses.so.5 `pwd`/lib64/libtinfo.so.5 + + find . -type f -print0 | while IFS= read -r -d "" file + do + type=$(file "$file") + ## Patch 64-bit binaries + if grep -q "ELF 64-bit" <<< "$type" then - patchelf --set-interpreter ${stdenv.cc.libc.out}/lib/ld-linux-x86-64.so.2 "$file" - fi - patchelf --set-rpath `pwd`/lib64:${stdenv.cc.cc.lib.out}/lib:${zlib.out}/lib:${ncurses.out}/lib "$file" - ## Patch 32-bit binaries - elif grep -q "ELF 32-bit" <<< "$type" - then - if grep -q "interpreter" <<< "$type" + if grep -q "interpreter" <<< "$type" + then + patchelf --set-interpreter ${stdenv.cc.libc.out}/lib/ld-linux-x86-64.so.2 "$file" + fi + patchelf --set-rpath `pwd`/lib64:${stdenv.cc.cc.lib.out}/lib:${zlib.out}/lib:${ncurses.out}/lib "$file" + ## Patch 32-bit binaries + elif grep -q "ELF 32-bit" <<< "$type" then - patchelf --set-interpreter ${stdenv_32bit.cc.libc.out}/lib/ld-linux.so.2 "$file" + if grep -q "interpreter" <<< "$type" + then + patchelf --set-interpreter ${stdenv_32bit.cc.libc.out}/lib/ld-linux.so.2 "$file" + fi + patchelf --set-rpath ${stdenv_32bit.cc.cc.lib.out}/lib:${zlib_32bit.out}/lib:${ncurses_32bit.out}/lib "$file" fi - patchelf --set-rpath ${stdenv_32bit.cc.cc.lib.out}/lib:${zlib_32bit.out}/lib:${ncurses_32bit.out}/lib "$file" - fi - done - ''} + done + ''} - patchShebangs . - ''; + patchShebangs . + ''; - buildInputs = [ unzip file ]; -} + buildInputs = [ unzip file ]; + }; +in + lib.mapAttrs buildBuildTools buildToolsSources diff --git a/pkgs/development/mobile/androidenv/default.nix b/pkgs/development/mobile/androidenv/default.nix index 1f61be9440b0..9058da1c50a0 100644 --- a/pkgs/development/mobile/androidenv/default.nix +++ b/pkgs/development/mobile/androidenv/default.nix @@ -1,5 +1,5 @@ { buildPackages, pkgs, pkgs_i686, targetPackages -, includeSources ? true +, includeSources ? true, licenseAccepted ? false }: # TODO: use callPackage instead of import to avoid so many inherits @@ -9,8 +9,19 @@ rec { inherit buildPackages pkgs; }; + buildToolsSources = let + system = pkgs.stdenv.hostPlatform.system; + path = if (system == "i686-linux" || system == "x86_64-linux") + then ./build-tools-srcs-linux.nix + else if system == "x86_64-darwin" + then ./build-tools-srcs-macosx.nix + else throw "System: ${system} not supported!"; + in + import path { inherit (pkgs) fetchurl; }; + buildTools = import ./build-tools.nix { - inherit (pkgs) stdenv fetchurl unzip zlib file; + inherit (pkgs) stdenv lib fetchurl unzip zlib file coreutils; + inherit buildToolsSources; stdenv_32bit = pkgs_i686.stdenv; zlib_32bit = pkgs_i686.zlib; ncurses_32bit = pkgs_i686.ncurses5; @@ -57,7 +68,7 @@ rec { inherit platformTools buildTools support supportRepository platforms sysimages - addons sources includeSources; + addons sources includeSources licenseAccepted; stdenv_32bit = pkgs_i686.stdenv; }; @@ -222,7 +233,37 @@ rec { useInstantApps = true; }; - androidsdk_latest = androidsdk_8_0; + androidsdk_8_1 = androidsdk { + platformVersions = [ "27" ]; + abiVersions = [ "x86" "x86_64"]; + useGoogleAPIs = true; + }; + + androidsdk_8_1_extras = androidsdk { + platformVersions = [ "27" ]; + abiVersions = [ "x86" "x86_64"]; + useGoogleAPIs = true; + useExtraSupportLibs = true; + useGooglePlayServices = true; + useInstantApps = true; + }; + + androidsdk_9_0 = androidsdk { + platformVersions = [ "28" ]; + abiVersions = [ "x86" "x86_64"]; + useGoogleAPIs = true; + }; + + androidsdk_9_0_extras = androidsdk { + platformVersions = [ "28" ]; + abiVersions = [ "x86" "x86_64"]; + useGoogleAPIs = true; + useExtraSupportLibs = true; + useGooglePlayServices = true; + useInstantApps = true; + }; + + androidsdk_latest = androidsdk_9_0; androidndk_10e = pkgs.callPackage ./androidndk.nix { inherit (buildPackages) diff --git a/pkgs/development/mobile/androidenv/fetch.sh b/pkgs/development/mobile/androidenv/fetch.sh index 2edbe6bf4898..ef15e8eaeda7 100755 --- a/pkgs/development/mobile/androidenv/fetch.sh +++ b/pkgs/development/mobile/androidenv/fetch.sh @@ -1,8 +1,5 @@ #! /usr/bin/env nix-shell -#! nix-shell -i bash --pure -p androidsdk curl libxslt - -# this shows a list of available xmls -android list sdk | grep 'Parse XML:' | cut -f8- -d\ # | xargs -n 1 curl -O +#! nix-shell -i bash --pure -p curl libxslt # we skip the intel addons, as they are Windows+osX only # we skip the default sys-img (arm?) because it is empty @@ -14,3 +11,4 @@ curl -o sys-img.xml https://dl.google.com/android/repository/sys-img/andro ./generate-platforms.sh ./generate-sysimages.sh ./generate-sources.sh +./generate-tools.sh diff --git a/pkgs/development/mobile/androidenv/generate-tools.sh b/pkgs/development/mobile/androidenv/generate-tools.sh new file mode 100755 index 000000000000..5799894fd457 --- /dev/null +++ b/pkgs/development/mobile/androidenv/generate-tools.sh @@ -0,0 +1,4 @@ +#!/bin/sh -e + +xsltproc --stringparam os linux generate-tools.xsl repository-11.xml > build-tools-srcs-linux.nix +xsltproc --stringparam os macosx generate-tools.xsl repository-11.xml > build-tools-srcs-macosx.nix diff --git a/pkgs/development/mobile/androidenv/generate-tools.xsl b/pkgs/development/mobile/androidenv/generate-tools.xsl new file mode 100644 index 000000000000..814bad129889 --- /dev/null +++ b/pkgs/development/mobile/androidenv/generate-tools.xsl @@ -0,0 +1,43 @@ +<?xml version="1.0"?> + +<xsl:stylesheet version="1.0" xmlns:xsl="http://www.w3.org/1999/XSL/Transform" + xmlns:sdk="http://schemas.android.com/sdk/android/repository/11"> + + <xsl:param name="os" /> + <xsl:output omit-xml-declaration="yes" indent="no" /> + + <xsl:template name="repository-url"> + <xsl:variable name="raw-url" select="sdk:archives/sdk:archive[sdk:host-os=$os or count(sdk:host-os) = 0]/sdk:url"/> + <xsl:choose> + <xsl:when test="starts-with($raw-url, 'http')"> + <xsl:value-of select="$raw-url"/> + </xsl:when> + <xsl:otherwise> + <xsl:text>https://dl.google.com/android/repository/</xsl:text> + <xsl:value-of select="$raw-url"/> + </xsl:otherwise> + </xsl:choose> + </xsl:template> + + <xsl:template match="/sdk:sdk-repository"> +# This file is generated from generate-tools.sh. DO NOT EDIT. +# Execute generate-tools.sh or fetch.sh to update the file. +{ fetchurl }: + +{ + <xsl:for-each select="sdk:build-tool"> + <xsl:sort select="sdk:revision/sdk:major" data-type="number"/> + <xsl:sort select="sdk:revision/sdk:minor" data-type="number"/> + <xsl:sort select="sdk:revision/sdk:micro" data-type="number"/> + <xsl:sort select="sdk:revision/sdk:preview" data-type="number"/> + v<xsl:value-of select="sdk:revision/sdk:major"/><xsl:if test="sdk:revision/sdk:minor + sdk:revision/sdk:micro > 0">_<xsl:value-of select="sdk:revision/sdk:minor" />_<xsl:value-of select="sdk:revision/sdk:micro"/></xsl:if><xsl:if test="sdk:revision/sdk:preview > 0">_rc<xsl:value-of select="sdk:revision/sdk:preview"/></xsl:if> = { + version = "<xsl:value-of select="sdk:revision/sdk:major"/>.<xsl:value-of select="sdk:revision/sdk:minor" />.<xsl:value-of select="sdk:revision/sdk:micro"/><xsl:if test="sdk:revision/sdk:preview > 0">-rc<xsl:value-of select="sdk:revision/sdk:preview"/></xsl:if>"; + src = fetchurl { + url = <xsl:call-template name="repository-url"/>; + sha1 = "<xsl:value-of select="sdk:archives/sdk:archive[sdk:host-os=$os or count(sdk:host-os) = 0]/sdk:checksum[@type='sha1']" />"; + }; + }; +</xsl:for-each> +} +</xsl:template> +</xsl:stylesheet> diff --git a/pkgs/development/mobile/androidenv/platforms-linux.nix b/pkgs/development/mobile/androidenv/platforms-linux.nix index e24a9c431602..dbb295f8cf55 100644 --- a/pkgs/development/mobile/androidenv/platforms-linux.nix +++ b/pkgs/development/mobile/androidenv/platforms-linux.nix @@ -316,4 +316,28 @@ in }; }; + platform_27 = buildPlatform { + name = "android-platform-8.1.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/platform-27_r03.zip; + sha1 = "35f747e7e70b2d16e0e4246876be28d15ea1c353"; + }; + meta = { + description = "Android SDK Platform 27"; + homepage = http://developer.android.com/sdk/; + }; + }; + + platform_28 = buildPlatform { + name = "android-platform-9"; + src = fetchurl { + url = https://dl.google.com/android/repository/platform-28_r06.zip; + sha1 = "9a4e52b1d55bd2e24216b150aafae2503d3efba6"; + }; + meta = { + description = "Android SDK Platform 28"; + homepage = http://developer.android.com/sdk/; + }; + }; + } diff --git a/pkgs/development/mobile/androidenv/platforms-macosx.nix b/pkgs/development/mobile/androidenv/platforms-macosx.nix index 3775872514ca..30ed94e516a2 100644 --- a/pkgs/development/mobile/androidenv/platforms-macosx.nix +++ b/pkgs/development/mobile/androidenv/platforms-macosx.nix @@ -316,4 +316,28 @@ in }; }; + platform_27 = buildPlatform { + name = "android-platform-8.1.0"; + src = fetchurl { + url = https://dl.google.com/android/repository/platform-27_r03.zip; + sha1 = "35f747e7e70b2d16e0e4246876be28d15ea1c353"; + }; + meta = { + description = "Android SDK Platform 27"; + homepage = http://developer.android.com/sdk/; + }; + }; + + platform_28 = buildPlatform { + name = "android-platform-9"; + src = fetchurl { + url = https://dl.google.com/android/repository/platform-28_r06.zip; + sha1 = "9a4e52b1d55bd2e24216b150aafae2503d3efba6"; + }; + meta = { + description = "Android SDK Platform 28"; + homepage = http://developer.android.com/sdk/; + }; + }; + } diff --git a/pkgs/development/mobile/androidenv/repository-11.xml b/pkgs/development/mobile/androidenv/repository-11.xml index 3924d6ddd3b6..45ad16be57b0 100644 --- a/pkgs/development/mobile/androidenv/repository-11.xml +++ b/pkgs/development/mobile/androidenv/repository-11.xml @@ -15,7 +15,7 @@ * limitations under the License. --> <sdk:sdk-repository xmlns:sdk="http://schemas.android.com/sdk/android/repository/11" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> - <!--Generated on 2017-09-08 08:20:34.788412 with ADRT.--> + <!--Generated on 2018-10-17 16:21:19.063228 with ADRT.--> <sdk:license id="android-sdk-license" type="text">Terms and Conditions This is the Android Software Development Kit License Agreement @@ -50,7 +50,7 @@ This is the Android Software Development Kit License Agreement 3.3 You agree that Google or third parties own all legal right, title and interest in and to the SDK, including any Intellectual Property Rights that subsist in the SDK. "Intellectual Property Rights" means any and all rights under patent law, copyright law, trade secret law, trademark law, and any and all other proprietary rights. Google reserves all rights not expressly granted to you. -3.4 You may not use the SDK for any purpose not expressly permitted by the License Agreement. Except to the extent required by applicable third party licenses, you may not: (a) copy (except for backup purposes), modify, adapt, redistribute, decompile, reverse engineer, disassemble, or create derivative works of the SDK or any part of the SDK; or (b) load any part of the SDK onto a mobile handset or any other hardware device except a personal computer, combine any part of the SDK with other software, or distribute any software or device incorporating a part of the SDK. +3.4 You may not use the SDK for any purpose not expressly permitted by the License Agreement. Except to the extent required by applicable third party licenses, you may not copy (except for backup purposes), modify, adapt, redistribute, decompile, reverse engineer, disassemble, or create derivative works of the SDK or any part of the SDK. 3.5 Use, reproduction and distribution of components of the SDK licensed under an open source software license are governed solely by the terms of that open source software license and not the License Agreement. @@ -296,39 +296,39 @@ This is the Android SDK Preview License Agreement (the "License Agreement&q June 2014.</sdk:license> <sdk:ndk> - <!--Generated from bid:4203891, branch:aosp-ndk-r15-release--> + <!--Generated from bid:5063045, branch:aosp-ndk-release-r18--> <sdk:description>NDK</sdk:description> - <sdk:revision>15</sdk:revision> + <sdk:revision>18</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Jul 24 11:35:28 2017.--> - <sdk:size>960251267</sdk:size> - <sdk:checksum type="sha1">ea4b5d76475db84745aa8828000d009625fc1f98</sdk:checksum> - <sdk:url>android-ndk-r15c-darwin-x86_64.zip</sdk:url> + <!--Built on: Thu Oct 11 14:06:10 2018.--> + <sdk:size>542911996</sdk:size> + <sdk:checksum type="sha1">98cb9909aa8c2dab32db188bbdc3ac6207e09440</sdk:checksum> + <sdk:url>android-ndk-r18b-darwin-x86_64.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> <sdk:host-bits>64</sdk:host-bits> </sdk:archive> <sdk:archive> - <!--Built on: Mon Jul 24 11:35:55 2017.--> - <sdk:size>974976754</sdk:size> - <sdk:checksum type="sha1">0bf02d4e8b85fd770fd7b9b2cdec57f9441f27a2</sdk:checksum> - <sdk:url>android-ndk-r15c-linux-x86_64.zip</sdk:url> + <!--Built on: Thu Oct 11 14:06:26 2018.--> + <sdk:size>557038702</sdk:size> + <sdk:checksum type="sha1">500679655da3a86aecf67007e8ab230ea9b4dd7b</sdk:checksum> + <sdk:url>android-ndk-r18b-linux-x86_64.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> <sdk:host-bits>64</sdk:host-bits> </sdk:archive> <sdk:archive> - <!--Built on: Mon Jul 24 11:34:34 2017.--> - <sdk:size>784778144</sdk:size> - <sdk:checksum type="sha1">f2e47121feb73ec34ced5e947cbf1adc6b56246e</sdk:checksum> - <sdk:url>android-ndk-r15c-windows-x86.zip</sdk:url> + <!--Built on: Thu Oct 11 14:05:37 2018.--> + <sdk:size>504605336</sdk:size> + <sdk:checksum type="sha1">4b8b6a4edc0fa967b429c1d6d25adf69acc28803</sdk:checksum> + <sdk:url>android-ndk-r18b-windows-x86.zip</sdk:url> <sdk:host-os>windows</sdk:host-os> <sdk:host-bits>32</sdk:host-bits> </sdk:archive> <sdk:archive> - <!--Built on: Mon Jul 24 11:35:03 2017.--> - <sdk:size>849733996</sdk:size> - <sdk:checksum type="sha1">970bb2496de0eada74674bb1b06d79165f725696</sdk:checksum> - <sdk:url>android-ndk-r15c-windows-x86_64.zip</sdk:url> + <!--Built on: Thu Oct 11 14:05:53 2018.--> + <sdk:size>522489470</sdk:size> + <sdk:checksum type="sha1">6b6d4138aaaad7166679fdfa4780e177f95cee6f</sdk:checksum> + <sdk:url>android-ndk-r18b-windows-x86_64.zip</sdk:url> <sdk:host-os>windows</sdk:host-os> <sdk:host-bits>64</sdk:host-bits> </sdk:archive> @@ -336,6 +336,54 @@ June 2014.</sdk:license> <sdk:uses-license ref="android-sdk-license"/> </sdk:ndk> <sdk:platform> + <!--Generated from bid:4913185, branch:pi-sdk-release--> + <sdk:version>9</sdk:version> + <sdk:api-level>28</sdk:api-level> + <sdk:description>Android SDK Platform 28</sdk:description> + <sdk:revision>6</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Wed Jul 25 20:19:20 2018.--> + <sdk:size>75565084</sdk:size> + <sdk:checksum type="sha1">9a4e52b1d55bd2e24216b150aafae2503d3efba6</sdk:checksum> + <sdk:url>platform-28_r06.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + <sdk:min-tools-rev> + <sdk:major>22</sdk:major> + </sdk:min-tools-rev> + <sdk:desc-url>http://developer.android.com/sdk/</sdk:desc-url> + <sdk:layoutlib> + <sdk:api>15</sdk:api> + <sdk:revision>1</sdk:revision> + </sdk:layoutlib> + </sdk:platform> + <sdk:platform> + <!--Generated from bid:4774931, branch:git_oc-mr1-sdk-release--> + <sdk:version>8.1.0</sdk:version> + <sdk:api-level>27</sdk:api-level> + <sdk:description>Android SDK Platform 27</sdk:description> + <sdk:revision>3</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Fri May 11 15:44:04 2018.--> + <sdk:size>65635348</sdk:size> + <sdk:checksum type="sha1">35f747e7e70b2d16e0e4246876be28d15ea1c353</sdk:checksum> + <sdk:url>platform-27_r03.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + <sdk:min-tools-rev> + <sdk:major>22</sdk:major> + </sdk:min-tools-rev> + <sdk:desc-url>http://developer.android.com/sdk/</sdk:desc-url> + <sdk:layoutlib> + <sdk:api>15</sdk:api> + <sdk:revision>1</sdk:revision> + </sdk:layoutlib> + </sdk:platform> + <sdk:platform> <!--Generated from bid:4187382, branch:git_oc-release--> <sdk:version>8.0.0</sdk:version> <sdk:api-level>26</sdk:api-level> @@ -343,7 +391,7 @@ June 2014.</sdk:license> <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Jul 18 10:38:38 2017.--> + <!--Built on: Wed May 23 00:35:53 2018.--> <sdk:size>63623734</sdk:size> <sdk:checksum type="sha1">e4ae5d7aa557a3c827135838ee400da8443ac4ef</sdk:checksum> <sdk:url>platform-26_r02.zip</sdk:url> @@ -367,7 +415,7 @@ June 2014.</sdk:license> <sdk:revision>3</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Dec 5 10:12:38 2016.--> + <!--Built on: Sat May 26 06:47:38 2018.--> <sdk:size>85424763</sdk:size> <sdk:checksum type="sha1">00c2c5765e8988504be10a1eb66ed71fcdbd7fe8</sdk:checksum> <sdk:url>platform-25_r03.zip</sdk:url> @@ -391,7 +439,7 @@ June 2014.</sdk:license> <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 22 11:05:39 2016.--> + <!--Built on: Tue Jun 5 15:00:21 2018.--> <sdk:size>82648154</sdk:size> <sdk:checksum type="sha1">8912da3d4bfe7a9f28f0e5ce92d3a8dc96342aee</sdk:checksum> <sdk:url>platform-24_r02.zip</sdk:url> @@ -415,7 +463,7 @@ June 2014.</sdk:license> <sdk:revision>3</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Mar 22 14:26:20 2016.--> + <!--Built on: Mon May 21 15:53:43 2018.--> <sdk:size>70433421</sdk:size> <sdk:checksum type="sha1">027fede3de6aa1649115bbd0bffff30ccd51c9a0</sdk:checksum> <sdk:url>platform-23_r03.zip</sdk:url> @@ -439,7 +487,7 @@ June 2014.</sdk:license> <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:13 2016.--> + <!--Built on: Mon May 21 03:54:34 2018.--> <sdk:size>66852371</sdk:size> <sdk:checksum type="sha1">5d1bd10fea962b216a0dece1247070164760a9fc</sdk:checksum> <sdk:url>android-22_r02.zip</sdk:url> @@ -463,7 +511,7 @@ June 2014.</sdk:license> <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:12 2016.--> + <!--Built on: Tue Jun 19 02:28:04 2018.--> <sdk:size>65897960</sdk:size> <sdk:checksum type="sha1">53536556059bb29ae82f414fd2e14bc335a4eb4c</sdk:checksum> <sdk:url>android-21_r02.zip</sdk:url> @@ -487,7 +535,7 @@ June 2014.</sdk:license> <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:12 2016.--> + <!--Built on: Sun Jun 3 18:11:51 2018.--> <sdk:size>63567784</sdk:size> <sdk:checksum type="sha1">a9251f8a3f313ab05834a07a963000927637e01d</sdk:checksum> <sdk:url>android-20_r02.zip</sdk:url> @@ -511,7 +559,7 @@ June 2014.</sdk:license> <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:11 2016.--> + <!--Built on: Fri May 25 15:40:05 2018.--> <sdk:size>63871092</sdk:size> <sdk:checksum type="sha1">2ff20d89e68f2f5390981342e009db5a2d456aaa</sdk:checksum> <sdk:url>android-19_r04.zip</sdk:url> @@ -535,7 +583,7 @@ June 2014.</sdk:license> <sdk:revision>3</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:11 2016.--> + <!--Built on: Fri May 18 13:24:37 2018.--> <sdk:size>57771739</sdk:size> <sdk:checksum type="sha1">e6b09b3505754cbbeb4a5622008b907262ee91cb</sdk:checksum> <sdk:url>android-18_r03.zip</sdk:url> @@ -559,7 +607,7 @@ June 2014.</sdk:license> <sdk:revision>3</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:11 2016.--> + <!--Built on: Sat May 26 21:15:56 2018.--> <sdk:size>57030216</sdk:size> <sdk:checksum type="sha1">dbe14101c06e6cdb34e300393e64e64f8c92168a</sdk:checksum> <sdk:url>android-17_r03.zip</sdk:url> @@ -583,7 +631,7 @@ June 2014.</sdk:license> <sdk:revision>5</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:10 2016.--> + <!--Built on: Wed May 23 08:20:21 2018.--> <sdk:size>48128695</sdk:size> <sdk:checksum type="sha1">12a5ce6235a76bc30f62c26bda1b680e336abd07</sdk:checksum> <sdk:url>android-16_r05.zip</sdk:url> @@ -607,7 +655,7 @@ June 2014.</sdk:license> <sdk:revision>5</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:10 2016.--> + <!--Built on: Sat Jun 2 14:02:31 2018.--> <sdk:size>44533475</sdk:size> <sdk:checksum type="sha1">69ab4c443b37184b2883af1fd38cc20cbeffd0f3</sdk:checksum> <sdk:url>android-15_r05.zip</sdk:url> @@ -631,7 +679,7 @@ June 2014.</sdk:license> <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:09 2016.--> + <!--Built on: Mon Jun 4 10:33:42 2018.--> <sdk:size>46038082</sdk:size> <sdk:checksum type="sha1">d4f1d8fbca25225b5f0e7a0adf0d39c3d6e60b3c</sdk:checksum> <sdk:url>android-14_r04.zip</sdk:url> @@ -652,7 +700,7 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue May 24 11:44:04 2016.--> + <!--Built on: Sat Jun 2 07:27:36 2018.--> <sdk:size>108426536</sdk:size> <sdk:checksum type="sha1">6189a500a8c44ae73a439604363de93591163cd9</sdk:checksum> <sdk:url>android-3.2_r01.zip</sdk:url> @@ -675,7 +723,7 @@ June 2014.</sdk:license> <sdk:revision>3</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue May 24 11:45:54 2016.--> + <!--Built on: Thu May 24 23:42:26 2018.--> <sdk:size>106472351</sdk:size> <sdk:checksum type="sha1">4a50a6679cd95bb68bb5fc032e754cd7c5e2b1bf</sdk:checksum> <sdk:url>android-3.1_r03.zip</sdk:url> @@ -698,7 +746,7 @@ June 2014.</sdk:license> <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue May 24 11:45:33 2016.--> + <!--Built on: Sun Jun 17 05:58:58 2018.--> <sdk:size>104513908</sdk:size> <sdk:checksum type="sha1">2c7d4bd13f276e76f6bbd87315fe27aba351dd37</sdk:checksum> <sdk:url>android-3.0_r02.zip</sdk:url> @@ -721,7 +769,7 @@ June 2014.</sdk:license> <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue May 24 11:46:21 2016.--> + <!--Built on: Wed Jun 13 04:35:13 2018.--> <sdk:size>85470907</sdk:size> <sdk:checksum type="sha1">887e37783ec32f541ea33c2c649dda648e8e6fb3</sdk:checksum> <sdk:url>android-2.3.3_r02.zip</sdk:url> @@ -744,7 +792,7 @@ June 2014.</sdk:license> <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue May 24 11:47:02 2016.--> + <!--Built on: Tue Jun 19 00:10:28 2018.--> <sdk:size>78732563</sdk:size> <sdk:checksum type="sha1">209f8a7a8b2cb093fce858b8b55fed3ba5206773</sdk:checksum> <sdk:url>android-2.3.1_r02.zip</sdk:url> @@ -767,7 +815,7 @@ June 2014.</sdk:license> <sdk:revision>3</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:17 2016.--> + <!--Built on: Mon Jun 11 13:26:30 2018.--> <sdk:size>74652366</sdk:size> <sdk:checksum type="sha1">231262c63eefdff8fd0386e9ccfefeb27a8f9202</sdk:checksum> <sdk:url>android-2.2_r03.zip</sdk:url> @@ -790,7 +838,7 @@ June 2014.</sdk:license> <sdk:revision>3</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:17 2016.--> + <!--Built on: Fri May 25 18:43:17 2018.--> <sdk:size>70142829</sdk:size> <sdk:checksum type="sha1">5ce51b023ac19f8738500b1007a1da5de2349a1e</sdk:checksum> <sdk:url>android-2.1_r03.zip</sdk:url> @@ -814,21 +862,21 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:15 2016.--> + <!--Built on: Sun May 27 03:48:57 2018.--> <sdk:size>79192618</sdk:size> <sdk:checksum type="sha1">ce2c971dce352aa28af06bda92a070116aa5ae1a</sdk:checksum> <sdk:url>android-2.0.1_r01-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:15 2016.--> + <!--Built on: Fri Jun 15 10:07:34 2018.--> <sdk:size>79035527</sdk:size> <sdk:checksum type="sha1">c3096f80d75a6fc8cb38ef8a18aec920e53d42c0</sdk:checksum> <sdk:url>android-2.0.1_r01-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:15 2016.--> + <!--Built on: Fri Jun 8 14:23:45 2018.--> <sdk:size>80385601</sdk:size> <sdk:checksum type="sha1">255781ebe4509d9707d0e77edda2815e2bc216e6</sdk:checksum> <sdk:url>android-2.0.1_r01-windows.zip</sdk:url> @@ -853,21 +901,21 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:13 2016.--> + <!--Built on: Sat May 19 10:03:45 2018.--> <sdk:size>75095268</sdk:size> <sdk:checksum type="sha1">be9be6a99ca32875c96ec7f91160ca9fce7e3c7d</sdk:checksum> <sdk:url>android-2.0_r01-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:13 2016.--> + <!--Built on: Sat May 19 16:50:28 2018.--> <sdk:size>74956356</sdk:size> <sdk:checksum type="sha1">2a866d0870dbba18e0503cd41e5fae988a21b314</sdk:checksum> <sdk:url>android-2.0_r01-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:13 2016.--> + <!--Built on: Thu Jun 14 00:45:58 2018.--> <sdk:size>76288040</sdk:size> <sdk:checksum type="sha1">aeb623217ff88b87216d6eb7dbc846ed53f68f57</sdk:checksum> <sdk:url>android-2.0_r01-windows.zip</sdk:url> @@ -892,21 +940,21 @@ June 2014.</sdk:license> <sdk:revision>3</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:17 2016.--> + <!--Built on: Sat May 26 23:29:51 2018.--> <sdk:size>63454485</sdk:size> <sdk:checksum type="sha1">483ed088e45bbdf3444baaf9250c8b02e5383cb0</sdk:checksum> <sdk:url>android-1.6_r03-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:17 2016.--> + <!--Built on: Sat Jun 2 07:57:24 2018.--> <sdk:size>62418496</sdk:size> <sdk:checksum type="sha1">bdafad44f5df9f127979bdb21a1fdd87ee3cd625</sdk:checksum> <sdk:url>android-1.6_r03-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:17 2016.--> + <!--Built on: Mon Jun 4 04:34:06 2018.--> <sdk:size>64654625</sdk:size> <sdk:checksum type="sha1">ce0b5e4ffaf12ca4fd07c2da71a8a1ab4a03dc22</sdk:checksum> <sdk:url>android-1.6_r03-windows.zip</sdk:url> @@ -931,21 +979,21 @@ June 2014.</sdk:license> <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:14 2016.--> + <!--Built on: Thu May 17 22:23:16 2018.--> <sdk:size>53348669</sdk:size> <sdk:checksum type="sha1">5c134b7df5f4b8bd5b61ba93bdaebada8fa3468c</sdk:checksum> <sdk:url>android-1.5_r04-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:14 2016.--> + <!--Built on: Mon Jun 4 15:31:36 2018.--> <sdk:size>52440607</sdk:size> <sdk:checksum type="sha1">d3a67c2369afa48b6c3c7624de5031c262018d1e</sdk:checksum> <sdk:url>android-1.5_r04-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:14 2016.--> + <!--Built on: Thu Jun 14 02:58:08 2018.--> <sdk:size>54624370</sdk:size> <sdk:checksum type="sha1">5bb106d2e40d481edd337b0833093843e15fe49a</sdk:checksum> <sdk:url>android-1.5_r04-windows.zip</sdk:url> @@ -970,21 +1018,21 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:08 2016.--> + <!--Built on: Sun May 20 23:48:42 2018.--> <sdk:size>45476658</sdk:size> <sdk:checksum type="sha1">c054d25c9b4c6251fa49c2f9c54336998679d3fe</sdk:checksum> <sdk:url>android-1.1_r1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:08 2016.--> + <!--Built on: Sat May 19 16:29:20 2018.--> <sdk:size>45584305</sdk:size> <sdk:checksum type="sha1">e21dbcff45b7356657449ebb3c7e941be2bb5ebe</sdk:checksum> <sdk:url>android-1.1_r1-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:08 2016.--> + <!--Built on: Fri Jun 8 18:57:19 2018.--> <sdk:size>46828615</sdk:size> <sdk:checksum type="sha1">a4060f29ed39fc929c302836d488998c53c3002e</sdk:checksum> <sdk:url>android-1.1_r1-windows.zip</sdk:url> @@ -1001,12 +1049,54 @@ June 2014.</sdk:license> </sdk:layoutlib> </sdk:platform> <sdk:source> + <!--Generated from bid:4898911, branch:git_pi-release--> + <sdk:api-level>28</sdk:api-level> + <sdk:revision>1</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Wed Aug 8 15:54:23 2018.--> + <sdk:size>42552241</sdk:size> + <sdk:checksum type="sha1">5610e0c24235ee3fa343c899ddd551be30315255</sdk:checksum> + <sdk:url>sources-28_r01.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:source> + <sdk:source> + <!--Generated from bid:4402310, branch:git_oc-mr1-release--> + <sdk:api-level>27</sdk:api-level> + <sdk:revision>1</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Fri Jun 8 01:46:30 2018.--> + <sdk:size>36997618</sdk:size> + <sdk:checksum type="sha1">7b714670561d08f54751af42aca929867b806596</sdk:checksum> + <sdk:url>sources-27_r01.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:source> + <sdk:source> + <!--Generated from bid:4187382, branch:git_oc-release--> + <sdk:api-level>26</sdk:api-level> + <sdk:revision>1</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Fri Jun 8 01:15:38 2018.--> + <sdk:size>35138547</sdk:size> + <sdk:checksum type="sha1">2af701ee3223d580409288540b1d06932fd8f9b9</sdk:checksum> + <sdk:url>sources-26_r01.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:source> + <sdk:source> <!--Generated from bid:3544217, branch:git_nyc-mr1-sdk-dev--> <sdk:api-level>25</sdk:api-level> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Dec 5 10:12:27 2016.--> + <!--Built on: Tue Jun 5 06:06:13 2018.--> <sdk:size>30822685</sdk:size> <sdk:checksum type="sha1">bbc72efd1a9bad87cc507e308f0d29aad438c52c</sdk:checksum> <sdk:url>sources-25_r01.zip</sdk:url> @@ -1020,7 +1110,7 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 22 11:05:30 2016.--> + <!--Built on: Fri Jun 8 14:43:03 2018.--> <sdk:size>30270410</sdk:size> <sdk:checksum type="sha1">6b96115830a83d654479f32ce4b724ca9011148b</sdk:checksum> <sdk:url>sources-24_r01.zip</sdk:url> @@ -1034,7 +1124,7 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:21 2016.--> + <!--Built on: Sun Jun 10 14:12:23 2018.--> <sdk:size>31771965</sdk:size> <sdk:checksum type="sha1">b0f15da2762b42f543c5e364c2b15b198cc99cc2</sdk:checksum> <sdk:url>sources-23_r01.zip</sdk:url> @@ -1048,7 +1138,7 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:21 2016.--> + <!--Built on: Mon Jun 4 23:43:02 2018.--> <sdk:size>28861236</sdk:size> <sdk:checksum type="sha1">98320e13976d11597a4a730a8d203ac9a03ed5a6</sdk:checksum> <sdk:url>sources-22_r01.zip</sdk:url> @@ -1062,7 +1152,7 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:20 2016.--> + <!--Built on: Sat Jun 16 09:12:37 2018.--> <sdk:size>28274751</sdk:size> <sdk:checksum type="sha1">137a5044915d32bea297a8c1552684802bbc2e25</sdk:checksum> <sdk:url>sources-21_r01.zip</sdk:url> @@ -1076,7 +1166,7 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:20 2016.--> + <!--Built on: Sat Jun 2 19:46:05 2018.--> <sdk:size>23367603</sdk:size> <sdk:checksum type="sha1">8da3e40f2625f9f7ef38b7e403f49f67226c0d76</sdk:checksum> <sdk:url>sources-20_r01.zip</sdk:url> @@ -1090,7 +1180,7 @@ June 2014.</sdk:license> <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:23 2016.--> + <!--Built on: Tue May 29 10:39:58 2018.--> <sdk:size>21819439</sdk:size> <sdk:checksum type="sha1">433a1d043ef77561571250e94cb7a0ef24a202e7</sdk:checksum> <sdk:url>sources-19_r02.zip</sdk:url> @@ -1104,7 +1194,7 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:23 2016.--> + <!--Built on: Fri May 18 03:14:54 2018.--> <sdk:size>20226735</sdk:size> <sdk:checksum type="sha1">8b49fdf7433f4881a2bfb559b5dd05d8ec65fb78</sdk:checksum> <sdk:url>sources-18_r01.zip</sdk:url> @@ -1118,7 +1208,7 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:22 2016.--> + <!--Built on: Thu May 17 17:14:50 2018.--> <sdk:size>18976816</sdk:size> <sdk:checksum type="sha1">6f1f18cd2d2b1852d7f6892df9cee3823349d43a</sdk:checksum> <sdk:url>sources-17_r01.zip</sdk:url> @@ -1132,7 +1222,7 @@ June 2014.</sdk:license> <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:22 2016.--> + <!--Built on: Wed May 30 05:17:35 2018.--> <sdk:size>17876720</sdk:size> <sdk:checksum type="sha1">0f83c14ed333c45d962279ab5d6bc98a0269ef84</sdk:checksum> <sdk:url>sources-16_r02.zip</sdk:url> @@ -1146,7 +1236,7 @@ June 2014.</sdk:license> <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:22 2016.--> + <!--Built on: Sat Jun 16 23:00:27 2018.--> <sdk:size>16468746</sdk:size> <sdk:checksum type="sha1">e5992a5747c9590783fbbdd700337bf0c9f6b1fa</sdk:checksum> <sdk:url>sources-15_r02.zip</sdk:url> @@ -1161,7 +1251,7 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:21 2016.--> + <!--Built on: Sat Jun 9 09:00:50 2018.--> <sdk:size>16152383</sdk:size> <sdk:checksum type="sha1">eaf4ed7dcac46e68516a1b4aa5b0d9e5a39a7555</sdk:checksum> <sdk:url>sources-14_r01.zip</sdk:url> @@ -1170,6 +1260,392 @@ June 2014.</sdk:license> <sdk:uses-license ref="android-sdk-license"/> </sdk:source> <sdk:build-tool> + <!--Generated from bid:5016651, branch:pi-sdk-release--> + <sdk:revision> + <sdk:major>28</sdk:major> + <sdk:minor>0</sdk:minor> + <sdk:micro>3</sdk:micro> + </sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Tue Sep 18 17:02:14 2018.--> + <sdk:size>57830695</sdk:size> + <sdk:checksum type="sha1">ea6f2f7103cd9da9ff0bdf6e37fbbba548fa4165</sdk:checksum> + <sdk:url>build-tools_r28.0.3-linux.zip</sdk:url> + <sdk:host-os>linux</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Tue Sep 18 17:02:10 2018.--> + <sdk:size>57133581</sdk:size> + <sdk:checksum type="sha1">f8c333a2991b1ab05a671bc6248b78e00edcd83a</sdk:checksum> + <sdk:url>build-tools_r28.0.3-macosx.zip</sdk:url> + <sdk:host-os>macosx</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Tue Sep 18 17:02:07 2018.--> + <sdk:size>58393729</sdk:size> + <sdk:checksum type="sha1">05bd35bb48d11c848da2b393c6f864eb609aacba</sdk:checksum> + <sdk:url>build-tools_r28.0.3-windows.zip</sdk:url> + <sdk:host-os>windows</sdk:host-os> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:build-tool> + <sdk:build-tool> + <!--Generated from bid:4913185, branch:pi-sdk-release--> + <sdk:revision> + <sdk:major>28</sdk:major> + <sdk:minor>0</sdk:minor> + <sdk:micro>2</sdk:micro> + </sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Wed Jul 25 20:19:09 2018.--> + <sdk:size>57754663</sdk:size> + <sdk:checksum type="sha1">b4492209810a3fd48deaa982f9852fef12433d55</sdk:checksum> + <sdk:url>build-tools_r28.0.2-linux.zip</sdk:url> + <sdk:host-os>linux</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Wed Jul 25 20:19:05 2018.--> + <sdk:size>57057554</sdk:size> + <sdk:checksum type="sha1">c10dd5a7825578622fb362a8a34f76eb3ba0c0a9</sdk:checksum> + <sdk:url>build-tools_r28.0.2-macosx.zip</sdk:url> + <sdk:host-os>macosx</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Wed Jul 25 20:19:01 2018.--> + <sdk:size>58317692</sdk:size> + <sdk:checksum type="sha1">e9c570c568a0c2a32e88ee3204279019ebefd949</sdk:checksum> + <sdk:url>build-tools_r28.0.2-windows.zip</sdk:url> + <sdk:host-os>windows</sdk:host-os> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:build-tool> + <sdk:build-tool> + <!--Generated from bid:4860066, branch:pi-preview4-release--> + <sdk:revision> + <sdk:major>28</sdk:major> + <sdk:minor>0</sdk:minor> + <sdk:micro>1</sdk:micro> + </sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Tue Jun 26 16:23:22 2018.--> + <sdk:size>57610954</sdk:size> + <sdk:checksum type="sha1">ee70dfa1fccb58b37cebc9544830511f36a137a0</sdk:checksum> + <sdk:url>build-tools_r28.0.1-linux.zip</sdk:url> + <sdk:host-os>linux</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Tue Jun 26 16:23:20 2018.--> + <sdk:size>56913869</sdk:size> + <sdk:checksum type="sha1">aeef42ad953f1630dd6f5d71eefdc0b825211462</sdk:checksum> + <sdk:url>build-tools_r28.0.1-macosx.zip</sdk:url> + <sdk:host-os>macosx</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Tue Jun 26 16:23:17 2018.--> + <sdk:size>58173989</sdk:size> + <sdk:checksum type="sha1">29c6342835734be25b9e458ab3fad5750ad6a355</sdk:checksum> + <sdk:url>build-tools_r28.0.1-windows.zip</sdk:url> + <sdk:host-os>windows</sdk:host-os> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:build-tool> + <sdk:build-tool> + <!--Generated from bid:4799589, branch:pi-preview3-release--> + <sdk:revision> + <sdk:major>28</sdk:major> + <sdk:minor>0</sdk:minor> + <sdk:micro>0</sdk:micro> + </sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Wed May 23 16:22:51 2018.--> + <sdk:size>37157769</sdk:size> + <sdk:checksum type="sha1">d9f8a754d833ccd334f56fcc6089c5925cd82abb</sdk:checksum> + <sdk:url>build-tools_r28-linux.zip</sdk:url> + <sdk:host-os>linux</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Wed May 23 16:22:49 2018.--> + <sdk:size>36458977</sdk:size> + <sdk:checksum type="sha1">72088d32d1d82cc3c2cf7cf6618b6130c0c84ade</sdk:checksum> + <sdk:url>build-tools_r28-macosx.zip</sdk:url> + <sdk:host-os>macosx</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Wed May 23 16:22:47 2018.--> + <sdk:size>37718995</sdk:size> + <sdk:checksum type="sha1">d4b0638a877ed570e07876264e69fdbd86409610</sdk:checksum> + <sdk:url>build-tools_r28-windows.zip</sdk:url> + <sdk:host-os>windows</sdk:host-os> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:build-tool> + <sdk:build-tool> + <!--Generated from bid:4758566, branch:pi-preview2-release--> + <sdk:revision> + <sdk:major>28</sdk:major> + <sdk:minor>0</sdk:minor> + <sdk:micro>0</sdk:micro> + <sdk:preview>2</sdk:preview> + </sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Thu May 3 14:26:31 2018.--> + <sdk:size>37151124</sdk:size> + <sdk:checksum type="sha1">efe9c0dde0646a07544c864276390ca6e96b24dc</sdk:checksum> + <sdk:url>build-tools_r28-rc2-linux.zip</sdk:url> + <sdk:host-os>linux</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Thu May 3 14:26:27 2018.--> + <sdk:size>36449480</sdk:size> + <sdk:checksum type="sha1">0d0314b353589feb10e528b44c5a685b6658d797</sdk:checksum> + <sdk:url>build-tools_r28-rc2-macosx.zip</sdk:url> + <sdk:host-os>macosx</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Thu May 3 14:26:24 2018.--> + <sdk:size>37716459</sdk:size> + <sdk:checksum type="sha1">a94bfb52b4ec74b95c116236c3e382e923cad6c4</sdk:checksum> + <sdk:url>build-tools_r28-rc2-windows.zip</sdk:url> + <sdk:host-os>windows</sdk:host-os> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:build-tool> + <sdk:build-tool> + <!--Generated from bid:4614665, branch:git_pi-release--> + <sdk:revision> + <sdk:major>28</sdk:major> + <sdk:minor>0</sdk:minor> + <sdk:micro>0</sdk:micro> + <sdk:preview>1</sdk:preview> + </sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Sat Jun 16 20:06:20 2018.--> + <sdk:size>38703535</sdk:size> + <sdk:checksum type="sha1">1601977fae25fd478bcfaa0481ca5ea3c609d840</sdk:checksum> + <sdk:url>build-tools_r28-rc1-linux.zip</sdk:url> + <sdk:host-os>linux</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Sun Jun 10 21:05:54 2018.--> + <sdk:size>38004795</sdk:size> + <sdk:checksum type="sha1">2c77821967a2330b7b227072d0b1c02ef19fe2fc</sdk:checksum> + <sdk:url>build-tools_r28-rc1-macosx.zip</sdk:url> + <sdk:host-os>macosx</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Sat Jun 9 11:13:53 2018.--> + <sdk:size>39273232</sdk:size> + <sdk:checksum type="sha1">fbf46c33d1268f6532911707b2a05033fd5c5b41</sdk:checksum> + <sdk:url>build-tools_r28-rc1-windows.zip</sdk:url> + <sdk:host-os>windows</sdk:host-os> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:build-tool> + <sdk:build-tool> + <!--Generated from bid:4507799, branch:git_oc-mr1-sdk-release--> + <sdk:revision> + <sdk:major>27</sdk:major> + <sdk:minor>0</sdk:minor> + <sdk:micro>3</sdk:micro> + </sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Fri Jun 15 01:14:40 2018.--> + <sdk:size>54478554</sdk:size> + <sdk:checksum type="sha1">d85e7a6320eddffe7eeace3437605079dac938ca</sdk:checksum> + <sdk:url>build-tools_r27.0.3-linux.zip</sdk:url> + <sdk:host-os>linux</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Fri Jun 15 02:46:10 2018.--> + <sdk:size>53867966</sdk:size> + <sdk:checksum type="sha1">61d9fb18790c68d66ff73bf1e7ad56bc1f1eef2d</sdk:checksum> + <sdk:url>build-tools_r27.0.3-macosx.zip</sdk:url> + <sdk:host-os>macosx</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Mon Jun 18 21:09:43 2018.--> + <sdk:size>55194255</sdk:size> + <sdk:checksum type="sha1">0df61e11713a2838d2cc9a911219dddf5e6a2749</sdk:checksum> + <sdk:url>build-tools_r27.0.3-windows.zip</sdk:url> + <sdk:host-os>windows</sdk:host-os> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:build-tool> + <sdk:build-tool> + <!--Generated from bid:4458339, branch:git_oc-mr1-sdk-release--> + <sdk:revision> + <sdk:major>27</sdk:major> + <sdk:minor>0</sdk:minor> + <sdk:micro>2</sdk:micro> + </sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Mon Jun 4 08:42:16 2018.--> + <sdk:size>54458153</sdk:size> + <sdk:checksum type="sha1">b687ddf6be84f11607871138aad32cf857d0b837</sdk:checksum> + <sdk:url>build-tools_r27.0.2-linux.zip</sdk:url> + <sdk:host-os>linux</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Mon Jun 11 15:49:30 2018.--> + <sdk:size>53846615</sdk:size> + <sdk:checksum type="sha1">6d5d9cf2a47877f273f4b742b19e712a051a31be</sdk:checksum> + <sdk:url>build-tools_r27.0.2-macosx.zip</sdk:url> + <sdk:host-os>macosx</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Mon May 21 01:11:23 2018.--> + <sdk:size>55173070</sdk:size> + <sdk:checksum type="sha1">b80466c13b75e3ebf3c546964f40775db5898b2a</sdk:checksum> + <sdk:url>build-tools_r27.0.2-windows.zip</sdk:url> + <sdk:host-os>windows</sdk:host-os> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:build-tool> + <sdk:build-tool> + <!--Generated from bid:4429804, branch:git_oc-mr1-release--> + <sdk:revision> + <sdk:major>27</sdk:major> + <sdk:minor>0</sdk:minor> + <sdk:micro>1</sdk:micro> + </sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Wed Jun 13 21:53:36 2018.--> + <sdk:size>54450260</sdk:size> + <sdk:checksum type="sha1">7f4eedb1077ef948b848040dcd15de9e8a759f4a</sdk:checksum> + <sdk:url>build-tools_r27.0.1-linux.zip</sdk:url> + <sdk:host-os>linux</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Thu May 17 21:44:36 2018.--> + <sdk:size>53838762</sdk:size> + <sdk:checksum type="sha1">1edd07bfdbadd95652d093040e16d858f7489594</sdk:checksum> + <sdk:url>build-tools_r27.0.1-macosx.zip</sdk:url> + <sdk:host-os>macosx</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: 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<sdk:host-os>linux</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Sat May 26 11:11:32 2018.--> + <sdk:size>53839758</sdk:size> + <sdk:checksum type="sha1">5bb90ed935d99e5bc90686f43b852e68c5ad40df</sdk:checksum> + <sdk:url>build-tools_r26.0.3-macosx.zip</sdk:url> + <sdk:host-os>macosx</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Mon Jun 4 23:32:18 2018.--> + <sdk:size>55170919</sdk:size> + <sdk:checksum type="sha1">460e511a9616b4661cc8dba0102d9d990ae60160</sdk:checksum> + <sdk:url>build-tools_r26.0.3-windows.zip</sdk:url> + <sdk:host-os>windows</sdk:host-os> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:build-tool> + <sdk:build-tool> + <!--Generated from bid:4355572, branch:git_oc-mr1-release--> + <sdk:revision> + <sdk:major>26</sdk:major> + <sdk:minor>0</sdk:minor> + <sdk:micro>2</sdk:micro> + </sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Wed May 23 14:33:19 2018.--> + <sdk:size>54440678</sdk:size> + <sdk:checksum type="sha1">5b2b7b66c7bf2151f2af183b5b50a17808850592</sdk:checksum> + <sdk:url>build-tools_r26.0.2-linux.zip</sdk:url> + <sdk:host-os>linux</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Wed Jun 6 07:17:54 2018.--> + <sdk:size>53830573</sdk:size> + <sdk:checksum type="sha1">d9ed7c7f149ce38be5dc08979aea8acec1459ca0</sdk:checksum> + <sdk:url>build-tools_r26.0.2-macosx.zip</sdk:url> + <sdk:host-os>macosx</sdk:host-os> + </sdk:archive> + <sdk:archive> + <!--Built on: Mon Jun 11 07:41:38 2018.--> + <sdk:size>55161474</sdk:size> + <sdk:checksum type="sha1">39ca02d3faa49859cd9d1bc0adc2f331017b699b</sdk:checksum> + <sdk:url>build-tools_r26.0.2-windows.zip</sdk:url> + <sdk:host-os>windows</sdk:host-os> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + </sdk:build-tool> + <sdk:build-tool> <!--Generated from bid:4187382, branch:git_oc-release--> <sdk:revision> <sdk:major>26</sdk:major> @@ -1178,21 +1654,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Jul 18 10:38:26 2017.--> + <!--Built on: Fri Jun 8 18:48:52 2018.--> <sdk:size>54113329</sdk:size> <sdk:checksum type="sha1">5378c2c78091b414d0eac40a6bd37f2faa31a365</sdk:checksum> <sdk:url>build-tools_r26.0.1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Tue Jul 18 10:38:23 2017.--> + <!--Built on: Wed Jun 13 12:42:53 2018.--> <sdk:size>53266653</sdk:size> <sdk:checksum type="sha1">cbde59de198916b390777dd0227921bfa2120832</sdk:checksum> <sdk:url>build-tools_r26.0.1-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Tue Jul 18 10:38:21 2017.--> + <!--Built on: Tue Jun 5 10:41:28 2018.--> <sdk:size>54936185</sdk:size> <sdk:checksum type="sha1">02494c80ffbe65bfff0aaa7463c9692693327b7d</sdk:checksum> <sdk:url>build-tools_r26.0.1-windows.zip</sdk:url> @@ -1210,21 +1686,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Fri Jun 2 13:22:18 2017.--> + <!--Built on: Sat May 26 02:59:29 2018.--> <sdk:size>53854197</sdk:size> <sdk:checksum type="sha1">1cbe72929876f8a872ab1f1b1040a9f720261f59</sdk:checksum> <sdk:url>build-tools_r26-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Fri Jun 2 13:22:15 2017.--> + <!--Built on: Sat Jun 9 20:38:32 2018.--> <sdk:size>53010814</sdk:size> <sdk:checksum type="sha1">d01a1aeca03747245f1f5936b3cb01759c66d086</sdk:checksum> <sdk:url>build-tools_r26-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Fri Jun 2 13:22:13 2017.--> + <!--Built on: Thu May 31 06:40:23 2018.--> <sdk:size>54681641</sdk:size> <sdk:checksum type="sha1">896ebd31117c09db220f7a3116cc0e5121c78b9d</sdk:checksum> <sdk:url>build-tools_r26-windows.zip</sdk:url> @@ -1243,21 +1719,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Fri May 12 23:05:09 2017.--> + <!--Built on: Tue May 22 14:01:05 2018.--> <sdk:size>53847560</sdk:size> <sdk:checksum type="sha1">629bbd8d2e415bf64871fb0b4c0540fd6d0347a0</sdk:checksum> <sdk:url>build-tools_r26-rc2-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Fri May 12 23:05:07 2017.--> + <!--Built on: Sat May 26 08:16:12 2018.--> <sdk:size>53003874</sdk:size> <sdk:checksum type="sha1">cb1eb738a1f7003025af267a9b8cc2d259533c70</sdk:checksum> <sdk:url>build-tools_r26-rc2-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Fri May 12 23:05:05 2017.--> + <!--Built on: Mon Jun 18 00:43:07 2018.--> <sdk:size>54678375</sdk:size> <sdk:checksum type="sha1">ddaba77db0557a98f6330fbd579ad0bd12cbb152</sdk:checksum> <sdk:url>build-tools_r26-rc2-windows.zip</sdk:url> @@ -1276,21 +1752,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Mar 21 10:10:45 2017.--> + <!--Built on: Sun May 27 22:43:40 2018.--> <sdk:size>53648603</sdk:size> <sdk:checksum type="sha1">8cd6388dc96db2d7a49d06159cf990d3bbc78d04</sdk:checksum> <sdk:url>build-tools_r26-rc1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Tue Mar 21 10:10:34 2017.--> + <!--Built on: Tue Jun 12 18:41:58 2018.--> <sdk:size>52821129</sdk:size> <sdk:checksum type="sha1">5c5a1de7d5f4f000d36ae349229fe0be846d6137</sdk:checksum> <sdk:url>build-tools_r26-rc1-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Tue Mar 21 10:10:25 2017.--> + <!--Built on: Sat May 26 12:23:48 2018.--> <sdk:size>54379108</sdk:size> <sdk:checksum type="sha1">43c2ddad3b67a5c33712ae14331a60673e69be91</sdk:checksum> <sdk:url>build-tools_r26-rc1-windows.zip</sdk:url> @@ -1308,21 +1784,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Apr 13 13:27:23 2017.--> + <!--Built on: Mon Jun 4 10:03:34 2018.--> <sdk:size>50757258</sdk:size> <sdk:checksum type="sha1">db95f3a0ae376534d4d69f4cdb6fad20649f3509</sdk:checksum> <sdk:url>build-tools_r25.0.3-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Thu Apr 13 13:27:21 2017.--> + <!--Built on: Sat Jun 16 17:57:45 2018.--> <sdk:size>50545085</sdk:size> <sdk:checksum type="sha1">160d2fefb5ce68e443427fc30a793a703b63e26e</sdk:checksum> <sdk:url>build-tools_r25.0.3-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Thu Apr 13 13:27:19 2017.--> + <!--Built on: Sat Jun 2 16:26:03 2018.--> <sdk:size>51337442</sdk:size> <sdk:checksum type="sha1">1edcb109ae5133aebfed573cf0bc84e0c353c28d</sdk:checksum> <sdk:url>build-tools_r25.0.3-windows.zip</sdk:url> @@ -1340,21 +1816,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Dec 5 10:11:59 2016.--> + <!--Built on: Wed Jun 13 09:54:19 2018.--> <sdk:size>49880329</sdk:size> <sdk:checksum type="sha1">ff953c0177e317618fda40516f3e9d95fd43c7ae</sdk:checksum> <sdk:url>build-tools_r25.0.2-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Dec 5 10:11:57 2016.--> + <!--Built on: Tue May 29 08:01:46 2018.--> <sdk:size>49667185</sdk:size> <sdk:checksum type="sha1">12a5204bb3b6e39437535469fde7ddf42da46b16</sdk:checksum> <sdk:url>build-tools_r25.0.2-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Dec 5 10:11:55 2016.--> + <!--Built on: Thu Jun 7 23:11:35 2018.--> <sdk:size>50458908</sdk:size> <sdk:checksum type="sha1">2fee3c0704d6ecc480570450d8b8069b2c4a2dd4</sdk:checksum> <sdk:url>build-tools_r25.0.2-windows.zip</sdk:url> @@ -1372,21 +1848,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Nov 14 23:49:02 2016.--> + <!--Built on: Fri May 25 11:51:28 2018.--> <sdk:size>49880178</sdk:size> <sdk:checksum type="sha1">ff063d252ab750d339f5947d06ff782836f22bac</sdk:checksum> <sdk:url>build-tools_r25.0.1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Nov 14 23:49:00 2016.--> + <!--Built on: Mon May 21 03:26:16 2018.--> <sdk:size>49667353</sdk:size> <sdk:checksum type="sha1">7bf7f22d7d48ef20b6ab0e3d7a2912e5c088340f</sdk:checksum> <sdk:url>build-tools_r25.0.1-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Nov 14 23:48:57 2016.--> + <!--Built on: Wed May 30 20:26:28 2018.--> <sdk:size>50458759</sdk:size> <sdk:checksum type="sha1">c6c61393565ccf46349e7f44511e5db7c1c6169d</sdk:checksum> <sdk:url>build-tools_r25.0.1-windows.zip</sdk:url> @@ -1404,21 +1880,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Oct 17 14:57:00 2016.--> + <!--Built on: Sun Jun 3 08:35:42 2018.--> <sdk:size>49872921</sdk:size> <sdk:checksum type="sha1">f2bbda60403e75cabd0f238598c3b4dfca56ea44</sdk:checksum> <sdk:url>build-tools_r25-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Oct 17 14:56:58 2016.--> + <!--Built on: Tue Jun 5 22:55:37 2018.--> <sdk:size>49659466</sdk:size> <sdk:checksum type="sha1">273c5c29a65cbed00e44f3aa470bbd7dce556606</sdk:checksum> <sdk:url>build-tools_r25-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Oct 17 14:56:56 2016.--> + <!--Built on: Fri Jun 1 02:28:01 2018.--> <sdk:size>50451378</sdk:size> <sdk:checksum type="sha1">f9258f2308ff8b62cfc4513d40cb961612d07b6a</sdk:checksum> <sdk:url>build-tools_r25-windows.zip</sdk:url> @@ -1436,21 +1912,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Sep 27 10:00:17 2016.--> + <!--Built on: Sun Jun 10 09:52:06 2018.--> <sdk:size>49779151</sdk:size> <sdk:checksum type="sha1">9e8cc49d66e03fa1a8ecc1ac3e58f1324f5da304</sdk:checksum> <sdk:url>build-tools_r24.0.3-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Tue Sep 27 10:00:14 2016.--> + <!--Built on: Tue May 22 10:05:55 2018.--> <sdk:size>49568967</sdk:size> <sdk:checksum type="sha1">a01c15f1b105c34595681075e1895d58b3fff48c</sdk:checksum> <sdk:url>build-tools_r24.0.3-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Tue Sep 27 10:00:12 2016.--> + <!--Built on: Thu May 17 23:44:20 2018.--> <sdk:size>50354788</sdk:size> <sdk:checksum type="sha1">8b960d693fd4163caeb8dc5f5f5f80b10987089c</sdk:checksum> <sdk:url>build-tools_r24.0.3-windows.zip</sdk:url> @@ -1468,21 +1944,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 22 11:05:10 2016.--> + <!--Built on: Fri Jun 15 23:52:09 2018.--> <sdk:size>48936295</sdk:size> <sdk:checksum type="sha1">f199a7a788c3fefbed102eea34d6007737b803cf</sdk:checksum> <sdk:url>build-tools_r24.0.2-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 22 11:05:08 2016.--> + <!--Built on: Fri Jun 8 05:11:05 2018.--> <sdk:size>48726190</sdk:size> <sdk:checksum type="sha1">8bb8fc575477491d5957de743089df412de55cda</sdk:checksum> <sdk:url>build-tools_r24.0.2-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 22 11:05:05 2016.--> + <!--Built on: Fri Jun 15 23:26:15 2018.--> <sdk:size>49512513</sdk:size> <sdk:checksum type="sha1">09586a1f1c39bcfa7db5205c9a07837247deb67e</sdk:checksum> <sdk:url>build-tools_r24.0.2-windows.zip</sdk:url> @@ -1500,21 +1976,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Aug 23 11:42:33 2016.--> + <!--Built on: Mon May 28 07:24:53 2018.--> <sdk:size>48936286</sdk:size> <sdk:checksum type="sha1">84f18c392919a074fcbb9b1d967984e6b2fef8b4</sdk:checksum> <sdk:url>build-tools_r24.0.1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Tue Aug 23 11:42:31 2016.--> + <!--Built on: Thu Jun 14 02:41:05 2018.--> <sdk:size>48726085</sdk:size> <sdk:checksum type="sha1">5c6457fcdfa07724fb086d8ff4e8316fc0742848</sdk:checksum> <sdk:url>build-tools_r24.0.1-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Tue Aug 23 11:42:30 2016.--> + <!--Built on: Tue Jun 12 21:59:52 2018.--> <sdk:size>49511883</sdk:size> <sdk:checksum type="sha1">ac4a7cea42c3ef74d7fbf1b992fad311c550034e</sdk:checksum> <sdk:url>build-tools_r24.0.1-windows.zip</sdk:url> @@ -1532,21 +2008,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:09 2016.--> + <!--Built on: Thu May 31 15:18:44 2018.--> <sdk:size>48960919</sdk:size> <sdk:checksum type="sha1">c6271c4d78a5612ea6c7150688bcd5b7313de8d1</sdk:checksum> <sdk:url>build-tools_r24-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:36 2016.--> + <!--Built on: Sun Jun 10 20:05:01 2018.--> <sdk:size>48747930</sdk:size> <sdk:checksum type="sha1">97fc4ed442f23989cc488d02c1d1de9bdde241de</sdk:checksum> <sdk:url>build-tools_r24-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:19:02 2016.--> + <!--Built on: Sun Jun 10 15:13:01 2018.--> <sdk:size>49535326</sdk:size> <sdk:checksum type="sha1">dc61b9e5b451a0c3ec42ae2b1ce27c4d3c8da9f7</sdk:checksum> <sdk:url>build-tools_r24-windows.zip</sdk:url> @@ -1564,21 +2040,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:06 2016.--> + <!--Built on: Sat May 19 00:00:21 2018.--> <sdk:size>39071201</sdk:size> <sdk:checksum type="sha1">8a9f2b37f6fcf7a9fa784dc21aeaeb41bbb9f2c3</sdk:checksum> <sdk:url>build-tools_r23.0.2-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:19:01 2016.--> + <!--Built on: Sun May 27 14:18:27 2018.--> <sdk:size>38060914</sdk:size> <sdk:checksum type="sha1">482c4cbceef8ff58aefd92d8155a38610158fdaf</sdk:checksum> <sdk:url>build-tools_r23.0.2-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:19:55 2016.--> + <!--Built on: Mon Jun 18 16:23:02 2018.--> <sdk:size>38217626</sdk:size> <sdk:checksum type="sha1">fc3a92c744d3ba0a16ccb5d2b41eea5974ce0a96</sdk:checksum> <sdk:url>build-tools_r23.0.2-windows.zip</sdk:url> @@ -1596,21 +2072,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:13 2016.--> + <!--Built on: Tue Jun 12 12:39:27 2018.--> <sdk:size>40733174</sdk:size> <sdk:checksum type="sha1">368f2600feac7e9b511b82f53d1f2240ae4a91a3</sdk:checksum> <sdk:url>build-tools_r23.0.3-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:36 2016.--> + <!--Built on: Fri Jun 8 14:28:55 2018.--> <sdk:size>39679533</sdk:size> <sdk:checksum type="sha1">fbc98cd303fd15a31d472de6c03bd707829f00b0</sdk:checksum> <sdk:url>build-tools_r23.0.3-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:59 2016.--> + <!--Built on: Sat Jun 9 16:05:42 2018.--> <sdk:size>39869945</sdk:size> <sdk:checksum type="sha1">c6d8266c6a3243c8f1e41b786c0e3cee4c781263</sdk:checksum> <sdk:url>build-tools_r23.0.3-windows.zip</sdk:url> @@ -1628,21 +2104,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:56:55 2016.--> + <!--Built on: Sun Jun 17 12:24:05 2018.--> <sdk:size>39069295</sdk:size> <sdk:checksum type="sha1">b6ba7c399d5fa487d95289d8832e4ad943aed556</sdk:checksum> <sdk:url>build-tools_r23.0.1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:56:55 2016.--> + <!--Built on: Tue Jun 12 04:52:07 2018.--> <sdk:size>38059328</sdk:size> <sdk:checksum type="sha1">d96ec1522721e9a179ae2c591c99f75d31d39718</sdk:checksum> <sdk:url>build-tools_r23.0.1-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:56:55 2016.--> + <!--Built on: Sat May 26 01:11:05 2018.--> <sdk:size>38558889</sdk:size> <sdk:checksum type="sha1">cc1d37231d228f7a6f130e1f8d8c940052f0f8ab</sdk:checksum> <sdk:url>build-tools_r23.0.1-windows.zip</sdk:url> @@ -1661,21 +2137,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:06 2016.--> + <!--Built on: Sat Jun 2 10:17:50 2018.--> <sdk:size>39080519</sdk:size> <sdk:checksum type="sha1">c1d6209212b01469f80fa804e0c1d39a06bc9060</sdk:checksum> <sdk:url>build-tools_r23-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:19:19 2016.--> + <!--Built on: Wed Jun 13 23:09:27 2018.--> <sdk:size>38070540</sdk:size> <sdk:checksum type="sha1">90ba6e716f7703a236cd44b2e71c5ff430855a03</sdk:checksum> <sdk:url>build-tools_r23-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:20:17 2016.--> + <!--Built on: Sat May 19 18:49:10 2018.--> <sdk:size>38570715</sdk:size> <sdk:checksum type="sha1">3874948f35f2f8946597679cc6e9151449f23b5d</sdk:checksum> <sdk:url>build-tools_r23-windows.zip</sdk:url> @@ -1693,21 +2169,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:01 2016.--> + <!--Built on: Thu Jun 14 19:03:49 2018.--> <sdk:size>33104577</sdk:size> <sdk:checksum type="sha1">da8b9c5c3ede39298e6cf0283c000c2ee9029646</sdk:checksum> <sdk:url>build-tools_r22.0.1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:48 2016.--> + <!--Built on: Mon Jun 11 09:42:44 2018.--> <sdk:size>33646102</sdk:size> <sdk:checksum type="sha1">53dad7f608e01d53b17176ba11165acbfccc5bbf</sdk:checksum> <sdk:url>build-tools_r22.0.1-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:19:49 2016.--> + <!--Built on: Sat Jun 2 09:57:53 2018.--> <sdk:size>33254137</sdk:size> <sdk:checksum type="sha1">61d8cbe069d9e0a57872a83e5e5abe164b7d52cf</sdk:checksum> <sdk:url>build-tools_r22.0.1-windows.zip</sdk:url> @@ -1726,21 +2202,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 04:17:57 2016.--> + <!--Built on: Wed May 30 05:04:37 2018.--> <sdk:size>33104280</sdk:size> <sdk:checksum type="sha1">a8a1619dd090e44fac957bce6842e62abf87965b</sdk:checksum> <sdk:url>build-tools_r22-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:14 2016.--> + <!--Built on: Sat May 26 11:13:48 2018.--> <sdk:size>33646090</sdk:size> <sdk:checksum type="sha1">af95429b24088d704bc5db9bd606e34ac1b82c0d</sdk:checksum> <sdk:url>build-tools_r22-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:19:09 2016.--> + <!--Built on: Sat May 26 03:19:55 2018.--> <sdk:size>33254114</sdk:size> <sdk:checksum type="sha1">08fcca41e81b172bd9f570963b90d3a84929e043</sdk:checksum> <sdk:url>build-tools_r22-windows.zip</sdk:url> @@ -1758,21 +2234,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 04:17:59 2016.--> + <!--Built on: Wed Jun 13 11:02:29 2018.--> <sdk:size>32637678</sdk:size> <sdk:checksum 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type="sha1">e1236ab8897b62b57414adcf04c132567b2612a5</sdk:checksum> <sdk:url>build-tools_r21.0.2-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:09 2016.--> + <!--Built on: Sun Jun 10 08:07:31 2018.--> <sdk:size>22668597</sdk:size> <sdk:checksum type="sha1">f17471c154058f3734729ef3cc363399b1cd3de1</sdk:checksum> <sdk:url>build-tools_r21.0.2-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:19:02 2016.--> + <!--Built on: Mon Jun 4 04:34:43 2018.--> <sdk:size>22306371</sdk:size> <sdk:checksum type="sha1">37496141b23cbe633167927b7abe6e22d9f1a1c1</sdk:checksum> <sdk:url>build-tools_r21.0.2-windows.zip</sdk:url> @@ -1890,21 +2366,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Aug 15 04:17:55 2016.--> + <!--Built on: Mon May 21 01:06:40 2018.--> <sdk:size>22153013</sdk:size> <sdk:checksum type="sha1">e573069eea3e5255e7a65bedeb767f4fd0a5f49a</sdk:checksum> <sdk:url>build-tools_r21.0.1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:08 2016.--> + <!--Built on: Sat Jun 9 12:04:35 2018.--> <sdk:size>22668616</sdk:size> <sdk:checksum type="sha1">b60c8f9b810c980abafa04896706f3911be1ade7</sdk:checksum> <sdk:url>build-tools_r21.0.1-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Aug 15 04:18:21 2016.--> + <!--Built on: Mon Jun 11 17:48:54 2018.--> <sdk:size>22306243</sdk:size> <sdk:checksum type="sha1">d68e7e6fd7a48c8759aa41d713c9d4f0e4c1c1df</sdk:checksum> <sdk:url>build-tools_r21.0.1-windows.zip</sdk:url> @@ -1923,21 +2399,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:56:49 2016.--> + <!--Built on: Tue Jun 12 23:16:22 2018.--> <sdk:size>22153145</sdk:size> <sdk:checksum 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type="sha1">1ff20ac15fa47a75d00346ec12f180d531b3ca89</sdk:checksum> <sdk:url>build-tools_r19.1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:56:48 2016.--> + <!--Built on: Tue May 29 05:26:30 2018.--> <sdk:size>21590160</sdk:size> <sdk:checksum type="sha1">0d11aae3417de1efb4b9a0e0a7855904a61bcec1</sdk:checksum> <sdk:url>build-tools_r19.1-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:56:48 2016.--> + <!--Built on: Fri Jun 1 00:37:10 2018.--> <sdk:size>20812533</sdk:size> <sdk:checksum type="sha1">13b367fbdbff8132cb4356f716e8dc8a8df745c5</sdk:checksum> <sdk:url>build-tools_r19.1-windows.zip</sdk:url> @@ -2020,21 +2496,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:56:47 2016.--> + <!--Built on: Sat May 26 14:59:05 2018.--> <sdk:size>21462150</sdk:size> <sdk:checksum 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type="sha1">55c1a6cf632e7d346f0002b275ec41fd3137fd83</sdk:checksum> <sdk:url>build-tools_r19-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:03 2016.--> + <!--Built on: Fri Jun 15 01:37:33 2018.--> <sdk:size>21441270</sdk:size> <sdk:checksum type="sha1">86ec1c12db1bc446b7bcaefc5cc14eb361044e90</sdk:checksum> <sdk:url>build-tools_r19-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:03 2016.--> + <!--Built on: Wed Jun 6 05:47:57 2018.--> <sdk:size>20611447</sdk:size> <sdk:checksum type="sha1">6edf505c20f5ece9c48fa0aff9a90488f9654d52</sdk:checksum> <sdk:url>build-tools_r19-windows.zip</sdk:url> @@ -2152,21 +2628,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:02 2016.--> + <!--Built on: Thu May 24 00:01:04 2018.--> <sdk:size>20229760</sdk:size> <sdk:checksum type="sha1">68c9acbfc0cec2d51b19efaed39831a17055d998</sdk:checksum> <sdk:url>build-tools_r18.1.1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:02 2016.--> + <!--Built on: Tue May 22 07:45:01 2018.--> <sdk:size>20452157</sdk:size> <sdk:checksum type="sha1">a9d9d37f6ddf859e57abc78802a77aaa166e48d4</sdk:checksum> <sdk:url>build-tools_r18.1.1-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:02 2016.--> + <!--Built on: Sun May 27 16:32:56 2018.--> <sdk:size>19660000</sdk:size> <sdk:checksum type="sha1">c4605066e2f851387ea70bc1442b1968bd7b4a15</sdk:checksum> <sdk:url>build-tools_r18.1.1-windows.zip</sdk:url> @@ -2185,21 +2661,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:01 2016.--> + <!--Built on: Mon Jun 4 05:17:04 2018.--> <sdk:size>20229298</sdk:size> <sdk:checksum type="sha1">f314a0599e51397f0886fe888b50dd98f2f050d8</sdk:checksum> <sdk:url>build-tools_r18.1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:01 2016.--> + <!--Built on: Sun Jun 17 12:29:46 2018.--> <sdk:size>20451524</sdk:size> <sdk:checksum type="sha1">16ddb299b8b43063e5bb3387ec17147c5053dfd8</sdk:checksum> <sdk:url>build-tools_r18.1-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:01 2016.--> + <!--Built on: Thu Jun 14 15:56:37 2018.--> <sdk:size>19659547</sdk:size> <sdk:checksum type="sha1">3a9810fc8559ab03c09378f07531e8cae2f1db30</sdk:checksum> <sdk:url>build-tools_r18.1-windows.zip</sdk:url> @@ -2218,21 +2694,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:00 2016.--> + <!--Built on: Sun Jun 10 13:17:31 2018.--> <sdk:size>16627330</sdk:size> <sdk:checksum type="sha1">f11618492b0d2270c332325d45d752d3656a9640</sdk:checksum> <sdk:url>build-tools_r18.0.1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:00 2016.--> + <!--Built on: Mon May 21 16:08:02 2018.--> <sdk:size>16633121</sdk:size> <sdk:checksum type="sha1">d84f5692fb44d60fc53e5b2507cebf9f24626902</sdk:checksum> <sdk:url>build-tools_r18.0.1-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:00 2016.--> + <!--Built on: Fri Jun 1 08:16:51 2018.--> <sdk:size>15413527</sdk:size> <sdk:checksum type="sha1">a6c2afd0b6289d589351956d2f5212b37014ca7d</sdk:checksum> <sdk:url>build-tools_r18.0.1-windows.zip</sdk:url> @@ -2251,21 +2727,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Mar 28 00:56:59 2016.--> + <!--Built on: Sat Jun 2 14:13:23 2018.--> <sdk:size>11696007</sdk:size> <sdk:checksum type="sha1">2c2872bc3806aabf16a12e3959c2183ddc866e6d</sdk:checksum> <sdk:url>build-tools_r17-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:00 2016.--> + <!--Built on: Tue Jun 19 09:33:42 2018.--> <sdk:size>12208114</sdk:size> <sdk:checksum type="sha1">602ee709be9dbb8f179b1e4075148a57f9419930</sdk:checksum> <sdk:url>build-tools_r17-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Mar 28 00:57:00 2016.--> + <!--Built on: Fri Jun 8 13:26:17 2018.--> <sdk:size>11004914</sdk:size> <sdk:checksum type="sha1">899897d327b0bad492d3a40d3db4d96119c15bc0</sdk:checksum> <sdk:url>build-tools_r17-windows.zip</sdk:url> @@ -2275,32 +2751,32 @@ June 2014.</sdk:license> <sdk:uses-license ref="android-sdk-license"/> </sdk:build-tool> <sdk:platform-tool> - <!--Generated from bid:4062713a, branch:git_oc-preview3-sdk--> + <!--Generated from bid:4986621, branch:aosp-sdk-release--> <sdk:revision> - <sdk:major>26</sdk:major> + <sdk:major>28</sdk:major> <sdk:minor>0</sdk:minor> - <sdk:micro>0</sdk:micro> + <sdk:micro>1</sdk:micro> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Fri Jun 2 13:22:20 2017.--> - <sdk:size>7771750</sdk:size> - <sdk:checksum type="sha1">e75b6137dc444f777eb02f44a6d9819b3aabff82</sdk:checksum> - <sdk:url>platform-tools_r26.0.0-darwin.zip</sdk:url> + <!--Built on: Fri Aug 31 09:51:45 2018.--> + <sdk:size>6848749</sdk:size> + <sdk:checksum type="sha1">ed1edad4a48c27655ce98d0a5821e7296e9de145</sdk:checksum> + <sdk:url>platform-tools_r28.0.1-darwin.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Fri Jun 2 13:22:19 2017.--> - <sdk:size>7859155</sdk:size> - <sdk:checksum type="sha1">00de8a6631405b617c10f68cd11ff2e1cd528e23</sdk:checksum> - <sdk:url>platform-tools_r26.0.0-linux.zip</sdk:url> + <!--Built on: Fri Aug 31 09:51:40 2018.--> + <sdk:size>6843966</sdk:size> + <sdk:checksum type="sha1">74ff83bc203f01c4f04bd9316ab5a2573f023fd1</sdk:checksum> + <sdk:url>platform-tools_r28.0.1-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Fri Jun 2 13:22:20 2017.--> - <sdk:size>7511554</sdk:size> - <sdk:checksum type="sha1">a4128ebc3d1b6372d981810920e3fa01637f891a</sdk:checksum> - <sdk:url>platform-tools_r26.0.0-windows.zip</sdk:url> + <!--Built on: Fri Aug 31 09:51:43 2018.--> + <sdk:size>6183783</sdk:size> + <sdk:checksum type="sha1">5a44d10d41725aa718c71b6e44bc2dea6f1a7f49</sdk:checksum> + <sdk:url>platform-tools_r28.0.1-windows.zip</sdk:url> <sdk:host-os>windows</sdk:host-os> </sdk:archive> </sdk:archives> @@ -2315,21 +2791,21 @@ June 2014.</sdk:license> </sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Mon Dec 12 17:20:14 2016.--> + <!--Built on: Mon May 21 14:06:04 2018.--> <sdk:size>277894900</sdk:size> <sdk:checksum type="sha1">72df3aa1988c0a9003ccdfd7a13a7b8bd0f47fc1</sdk:checksum> <sdk:url>tools_r25.2.5-linux.zip</sdk:url> <sdk:host-os>linux</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Dec 12 17:20:09 2016.--> + <!--Built on: Thu May 31 17:55:03 2018.--> <sdk:size>200529982</sdk:size> <sdk:checksum type="sha1">d2168d963ac5b616e3d3ddaf21511d084baf3659</sdk:checksum> <sdk:url>tools_r25.2.5-macosx.zip</sdk:url> <sdk:host-os>macosx</sdk:host-os> </sdk:archive> <sdk:archive> - <!--Built on: Mon Dec 12 17:20:05 2016.--> + <!--Built on: Thu Jun 7 09:09:48 2018.--> <sdk:size>306785944</sdk:size> <sdk:checksum type="sha1">a7f7ebeae1c8d8f62d3a8466e9c81baee7cc31ca</sdk:checksum> <sdk:url>tools_r25.2.5-windows.zip</sdk:url> @@ -2347,7 +2823,7 @@ June 2014.</sdk:license> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Sep 8 15:25:04 2016.--> + <!--Built on: Thu Jun 14 09:35:24 2018.--> <sdk:size>419477967</sdk:size> <sdk:checksum type="sha1">eef58238949ee9544876cb3e002f2d58e4ee7b5d</sdk:checksum> <sdk:url>docs-24_r01.zip</sdk:url> diff --git a/pkgs/development/mobile/androidenv/sources.nix b/pkgs/development/mobile/androidenv/sources.nix index e4fe3cf0ff5d..cca132e27749 100644 --- a/pkgs/development/mobile/androidenv/sources.nix +++ b/pkgs/development/mobile/androidenv/sources.nix @@ -148,4 +148,37 @@ in }; }; + source_26 = buildSource { + name = "android-source-26"; + src = fetchurl { + url = https://dl.google.com/android/repository/sources-26_r01.zip; + sha1 = "2af701ee3223d580409288540b1d06932fd8f9b9"; + }; + meta = { + description = "Source code for Android API 26"; + }; + }; + + source_27 = buildSource { + name = "android-source-27"; + src = fetchurl { + url = https://dl.google.com/android/repository/sources-27_r01.zip; + sha1 = "7b714670561d08f54751af42aca929867b806596"; + }; + meta = { + description = "Source code for Android API 27"; + }; + }; + + source_28 = buildSource { + name = "android-source-28"; + src = fetchurl { + url = https://dl.google.com/android/repository/sources-28_r01.zip; + sha1 = "5610e0c24235ee3fa343c899ddd551be30315255"; + }; + meta = { + description = "Source code for Android API 28"; + }; + }; + } diff --git a/pkgs/development/mobile/androidenv/sys-img.xml b/pkgs/development/mobile/androidenv/sys-img.xml index 2a720918c23a..d7c8dd9de9b3 100644 --- a/pkgs/development/mobile/androidenv/sys-img.xml +++ b/pkgs/development/mobile/androidenv/sys-img.xml @@ -1,6 +1,6 @@ <?xml version="1.0" ?> <sdk:sdk-sys-img xmlns:sdk="http://schemas.android.com/sdk/android/sys-img/3" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"> - <!--Generated on 2017-08-28 14:42:29.488243 with ADRT.--> + <!--Generated on 2018-09-27 12:07:51.414125 with ADRT.--> <sdk:license id="android-sdk-license" type="text">Terms and Conditions This is the Android Software Development Kit License Agreement @@ -35,7 +35,7 @@ This is the Android Software Development Kit License Agreement 3.3 You agree that Google or third parties own all legal right, title and interest in and to the SDK, including any Intellectual Property Rights that subsist in the SDK. "Intellectual Property Rights" means any and all rights under patent law, copyright law, trade secret law, trademark law, and any and all other proprietary rights. Google reserves all rights not expressly granted to you. -3.4 You may not use the SDK for any purpose not expressly permitted by the License Agreement. Except to the extent required by applicable third party licenses, you may not: (a) copy (except for backup purposes), modify, adapt, redistribute, decompile, reverse engineer, disassemble, or create derivative works of the SDK or any part of the SDK; or (b) load any part of the SDK onto a mobile handset or any other hardware device except a personal computer, combine any part of the SDK with other software, or distribute any software or device incorporating a part of the SDK. +3.4 You may not use the SDK for any purpose not expressly permitted by the License Agreement. Except to the extent required by applicable third party licenses, you may not copy (except for backup purposes), modify, adapt, redistribute, decompile, reverse engineer, disassemble, or create derivative works of the SDK or any part of the SDK. 3.5 Use, reproduction and distribution of components of the SDK licensed under an open source software license are governed solely by the terms of that open source software license and not the License Agreement. @@ -411,7 +411,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Fri Sep 16 16:38:16 2016.--> + <!--Built on: Fri Jul 27 08:50:45 2018.--> <sdk:size>67918042</sdk:size> <sdk:checksum type="sha1">54680383118eb5c95a11e1cc2a14aa572c86ee69</sdk:checksum> <sdk:url>armv7-10_r04.zip</sdk:url> @@ -428,7 +428,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Mar 29 18:25:05 2016.--> + <!--Built on: Thu Jul 26 20:46:32 2018.--> <sdk:size>99621822</sdk:size> <sdk:checksum type="sha1">d8991b0c06b18d7d6ed4169d67460ee1add6661b</sdk:checksum> <sdk:url>sysimg_armv7a-14_r02.zip</sdk:url> @@ -445,7 +445,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Nov 10 17:19:27 2016.--> + <!--Built on: Fri Jul 27 08:53:17 2018.--> <sdk:size>102079727</sdk:size> <sdk:checksum type="sha1">363223bd62f5afc0b2bd760b54ce9d26b31eacf1</sdk:checksum> <sdk:url>armeabi-v7a-15_r04.zip</sdk:url> @@ -462,7 +462,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Mar 29 18:24:59 2016.--> + <!--Built on: Thu Jul 26 16:01:22 2018.--> <sdk:size>112608076</sdk:size> <sdk:checksum type="sha1">39c093ea755098f0ee79f607be7df9e54ba4943f</sdk:checksum> <sdk:url>sysimg_armv7a-16_r04.zip</sdk:url> @@ -479,7 +479,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>5</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Nov 10 17:19:54 2016.--> + <!--Built on: Fri Jul 27 08:53:02 2018.--> <sdk:size>124238679</sdk:size> <sdk:checksum type="sha1">7460e8110f4a87f9644f1bdb5511a66872d50fd9</sdk:checksum> <sdk:url>armeabi-v7a-17_r05.zip</sdk:url> @@ -496,7 +496,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Nov 10 17:20:07 2016.--> + <!--Built on: Fri Jul 27 08:53:09 2018.--> <sdk:size>130394401</sdk:size> <sdk:checksum type="sha1">0bf34ecf4ddd53f6b1b7fe7dfa12f2887c17e642</sdk:checksum> <sdk:url>armeabi-v7a-18_r04.zip</sdk:url> @@ -513,7 +513,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>5</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Nov 10 17:20:23 2016.--> + <!--Built on: Fri Jul 27 08:53:25 2018.--> <sdk:size>159871567</sdk:size> <sdk:checksum type="sha1">d1a5fd4f2e1c013c3d3d9bfe7e9db908c3ed56fa</sdk:checksum> <sdk:url>armeabi-v7a-19_r05.zip</sdk:url> @@ -530,7 +530,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Fri Sep 16 16:35:34 2016.--> + <!--Built on: Fri Jul 27 08:50:26 2018.--> <sdk:size>187163871</sdk:size> <sdk:checksum type="sha1">8c606f81306564b65e41303d2603e4c42ded0d10</sdk:checksum> <sdk:url>armeabi-v7a-21_r04.zip</sdk:url> @@ -547,7 +547,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>2</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Fri Sep 16 16:35:50 2016.--> + <!--Built on: Fri Jul 27 08:50:08 2018.--> <sdk:size>194596267</sdk:size> <sdk:checksum type="sha1">2114ec015dbf3a16cbcb4f63e8a84a1b206a07a1</sdk:checksum> <sdk:url>armeabi-v7a-22_r02.zip</sdk:url> @@ -564,7 +564,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>6</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Fri Sep 16 16:41:26 2016.--> + <!--Built on: Fri Jul 27 08:50:36 2018.--> <sdk:size>238333358</sdk:size> <sdk:checksum type="sha1">7cf2ad756e54a3acfd81064b63cb0cb9dff2798d</sdk:checksum> <sdk:url>armeabi-v7a-23_r06.zip</sdk:url> @@ -582,7 +582,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>7</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Sep 6 08:28:18 2016.--> + <!--Built on: Fri Jul 27 08:51:39 2018.--> <sdk:size>283677512</sdk:size> <sdk:checksum type="sha1">3454546b4eed2d6c3dd06d47757d6da9f4176033</sdk:checksum> <sdk:url>armeabi-v7a-24_r07.zip</sdk:url> @@ -599,7 +599,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>7</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Sep 6 08:28:58 2016.--> + <!--Built on: Fri Jul 27 08:51:37 2018.--> <sdk:size>384556503</sdk:size> <sdk:checksum type="sha1">e8ab2e49e4efe4b064232b33b5eeaded61437d7f</sdk:checksum> <sdk:url>arm64-v8a-24_r07.zip</sdk:url> @@ -610,30 +610,13 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:tag-id>default</sdk:tag-id> </sdk:system-image> <sdk:system-image> - <!--Generated from bid:1741834, branch:git_ics-mr1--> - <sdk:api-level>15</sdk:api-level> - <sdk:description>MIPS System Image</sdk:description> - <sdk:revision>1</sdk:revision> - <sdk:archives> - <sdk:archive> - <!--Built on: Tue Mar 29 18:24:59 2016.--> - <sdk:size>117503178</sdk:size> - <sdk:checksum type="sha1">a753bb4a6783124dad726c500ce9aec9d2c1b2d9</sdk:checksum> - <sdk:url>sysimg_mips-15_r01.zip</sdk:url> - </sdk:archive> - </sdk:archives> - <sdk:uses-license ref="mips-android-sysimage-license"/> - <sdk:abi>mips</sdk:abi> - <sdk:tag-id>default</sdk:tag-id> - </sdk:system-image> - <sdk:system-image> <!--Generated from bid:1741836, branch:git_jb-dev--> <sdk:api-level>16</sdk:api-level> <sdk:description>MIPS System Image</sdk:description> <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Mar 29 18:25:00 2016.--> + <!--Built on: Thu Jul 26 16:01:28 2018.--> <sdk:size>122482530</sdk:size> <sdk:checksum type="sha1">67943c54fb3943943ffeb05fdd39c0b753681f6e</sdk:checksum> <sdk:url>sysimg_mips-16_r04.zip</sdk:url> @@ -650,7 +633,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>1</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Tue Mar 29 18:25:00 2016.--> + <!--Built on: Thu Jul 26 16:01:38 2018.--> <sdk:size>131781761</sdk:size> <sdk:checksum type="sha1">f0c6e153bd584c29e51b5c9723cfbf30f996a05d</sdk:checksum> <sdk:url>sysimg_mips-17_r01.zip</sdk:url> @@ -667,7 +650,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Fri Sep 16 16:10:43 2016.--> + <!--Built on: Fri Jul 27 08:50:47 2018.--> <sdk:size>75382637</sdk:size> <sdk:checksum type="sha1">655ffc5cc89dd45a3aca154b254009016e473aeb</sdk:checksum> <sdk:url>x86-10_r04.zip</sdk:url> @@ -684,7 +667,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Nov 10 17:20:36 2016.--> + <!--Built on: Fri Jul 27 08:53:18 2018.--> <sdk:size>115324561</sdk:size> <sdk:checksum type="sha1">e45c728b64881c0e86529a8f7ea9c103a3cd14c1</sdk:checksum> <sdk:url>x86-15_r04.zip</sdk:url> @@ -695,16 +678,16 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:tag-id>default</sdk:tag-id> </sdk:system-image> <sdk:system-image> - <!--Generated from bid:3462064, branch:git_jb-emu-release--> + <!--Generated from bid:4875369, branch:git_jb-emu-release--> <sdk:api-level>16</sdk:api-level> <sdk:description>Intel x86 Atom System Image</sdk:description> - <sdk:revision>5</sdk:revision> + <sdk:revision>6</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Nov 10 17:20:52 2016.--> - <sdk:size>134339698</sdk:size> - <sdk:checksum type="sha1">7ea16da3a8fdb880b1b290190fcc1bde2821c1e0</sdk:checksum> - <sdk:url>x86-16_r05.zip</sdk:url> + <!--Built on: Tue Jul 17 16:27:13 2018.--> + <sdk:size>134926152</sdk:size> + <sdk:checksum type="sha1">bf1bf8c5591346118d2235da1ad20e7be8a3e9cd</sdk:checksum> + <sdk:url>x86-16_r06.zip</sdk:url> </sdk:archive> </sdk:archives> <sdk:uses-license ref="android-sdk-license"/> @@ -712,16 +695,16 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:tag-id>default</sdk:tag-id> </sdk:system-image> <sdk:system-image> - <!--Generated from bid:3453820, branch:git_jb-mr1.1-emu-release--> + <!--Generated from bid:4875371, branch:git_jb-mr1.1-emu-release--> <sdk:api-level>17</sdk:api-level> <sdk:description>Intel x86 Atom System Image</sdk:description> - <sdk:revision>3</sdk:revision> + <sdk:revision>4</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Nov 10 17:21:06 2016.--> - <sdk:size>142951842</sdk:size> - <sdk:checksum type="sha1">eb30274460ff0d61f3ed37862b567811bebd8270</sdk:checksum> - <sdk:url>x86-17_r03.zip</sdk:url> + <!--Built on: Tue Jul 17 16:30:45 2018.--> + <sdk:size>143278662</sdk:size> + <sdk:checksum type="sha1">03c6d022ab2dcbbcf655d78ba5ccb0431cadcaec</sdk:checksum> + <sdk:url>x86-17_r04.zip</sdk:url> </sdk:archive> </sdk:archives> <sdk:uses-license ref="android-sdk-license"/> @@ -735,7 +718,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>3</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Nov 10 17:21:19 2016.--> + <!--Built on: Fri Jul 27 08:53:12 2018.--> <sdk:size>149657535</sdk:size> <sdk:checksum type="sha1">03a0cb23465c3de15215934a1dbc9715b56e9458</sdk:checksum> <sdk:url>x86-18_r03.zip</sdk:url> @@ -752,7 +735,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>6</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Jul 13 12:41:20 2017.--> + <!--Built on: Wed Jun 13 18:42:22 2018.--> <sdk:size>185886274</sdk:size> <sdk:checksum type="sha1">2ac82153aae97f7eae4c5a0761224fe04321d03d</sdk:checksum> <sdk:url>x86-19_r06.zip</sdk:url> @@ -769,7 +752,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>5</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Jul 13 12:42:18 2017.--> + <!--Built on: Tue May 22 03:41:51 2018.--> <sdk:size>208212529</sdk:size> <sdk:checksum type="sha1">00f0eb0a1003efe3316347f762e20a85d8749cff</sdk:checksum> <sdk:url>x86-21_r05.zip</sdk:url> @@ -786,7 +769,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>6</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Jul 13 12:43:18 2017.--> + <!--Built on: Sun May 20 00:45:19 2018.--> <sdk:size>214268954</sdk:size> <sdk:checksum type="sha1">e33e2a6cc3f1cc56b2019dbef3917d2eeb26f54e</sdk:checksum> <sdk:url>x86-22_r06.zip</sdk:url> @@ -803,7 +786,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>10</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Jul 13 12:44:25 2017.--> + <!--Built on: Tue Jun 5 22:05:27 2018.--> <sdk:size>260804863</sdk:size> <sdk:checksum type="sha1">f6c3e3dd7bd951454795aa75c3a145fd05ac25bb</sdk:checksum> <sdk:url>x86-23_r10.zip</sdk:url> @@ -820,7 +803,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>8</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Jul 13 12:45:47 2017.--> + <!--Built on: Tue May 22 10:30:01 2018.--> <sdk:size>313489224</sdk:size> <sdk:checksum type="sha1">c1cae7634b0216c0b5990f2c144eb8ca948e3511</sdk:checksum> <sdk:url>x86-24_r08.zip</sdk:url> @@ -831,13 +814,84 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:tag-id>default</sdk:tag-id> </sdk:system-image> <sdk:system-image> + <!--Generated from bid:4931657, branch:git_nyc-mr1-emu-release--> + <sdk:api-level>25</sdk:api-level> + <sdk:description>Intel x86 Atom System Image</sdk:description> + <sdk:revision>1</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Tue Aug 7 14:04:45 2018.--> + <sdk:size>316695942</sdk:size> + <sdk:checksum type="sha1">78ce7eb1387d598685633b9f7cbb300c3d3aeb5f</sdk:checksum> + <sdk:url>x86-25_r01.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + <sdk:abi>x86</sdk:abi> + <sdk:tag-id>default</sdk:tag-id> + </sdk:system-image> + <sdk:system-image> + <!--Generated from bid:4931640, branch:git_oc-emu-release--> + <sdk:api-level>26</sdk:api-level> + <sdk:description>Intel x86 Atom System Image</sdk:description> + <sdk:revision>1</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Tue Aug 7 14:05:14 2018.--> + <sdk:size>350195807</sdk:size> + <sdk:checksum type="sha1">e613d6e0da668e30daf547f3c6627a6352846f90</sdk:checksum> + <sdk:url>x86-26_r01.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + <sdk:abi>x86</sdk:abi> + <sdk:tag-id>default</sdk:tag-id> + <sdk:tag-display>Default Android System Image</sdk:tag-display> + </sdk:system-image> + <sdk:system-image> + <!--Generated from bid:4931629, branch:git_oc-mr1-emu-release--> + <sdk:api-level>27</sdk:api-level> + <sdk:description>Intel x86 Atom System Image</sdk:description> + <sdk:revision>1</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Tue Aug 7 14:05:43 2018.--> + <sdk:size>360984187</sdk:size> + <sdk:checksum type="sha1">4ec990fac7b62958decd12e18a4cd389dfe7c582</sdk:checksum> + <sdk:url>x86-27_r01.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + <sdk:abi>x86</sdk:abi> + <sdk:tag-id>default</sdk:tag-id> + <sdk:tag-display>Default Android System Image</sdk:tag-display> + </sdk:system-image> + <sdk:system-image> + <!--Generated from bid:4923214, branch:git_pi-emu-release--> + <sdk:api-level>28</sdk:api-level> + <sdk:description>Intel x86 Atom System Image</sdk:description> + <sdk:revision>4</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Tue Jul 31 17:43:13 2018.--> + <sdk:size>437320152</sdk:size> + <sdk:checksum type="sha1">ce03c42d80c0fc6dc47f6455dbee7aa275d02780</sdk:checksum> + <sdk:url>x86-28_r04.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-preview-license"/> + <sdk:abi>x86</sdk:abi> + <sdk:tag-id>default</sdk:tag-id> + <sdk:tag-display>Default Android System Image</sdk:tag-display> + </sdk:system-image> + <sdk:system-image> <!--Generated from bid:4174711, branch:git_lmp-emu-release--> <sdk:api-level>21</sdk:api-level> <sdk:description>Intel x86 Atom_64 System Image</sdk:description> <sdk:revision>5</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Jul 13 12:46:57 2017.--> + <!--Built on: Wed Jun 6 04:05:38 2018.--> <sdk:size>292623982</sdk:size> <sdk:checksum type="sha1">9078a095825a69e5e215713f0866c83cef65a342</sdk:checksum> <sdk:url>x86_64-21_r05.zip</sdk:url> @@ -854,7 +908,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>6</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Jul 13 12:48:15 2017.--> + <!--Built on: Sun May 27 01:45:29 2018.--> <sdk:size>299976630</sdk:size> <sdk:checksum type="sha1">5db3b27f78cd9c4c5092b1cad5a5dd479fb5b2e4</sdk:checksum> <sdk:url>x86_64-22_r06.zip</sdk:url> @@ -871,7 +925,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>10</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Jul 13 12:49:37 2017.--> + <!--Built on: Tue Jun 12 05:59:42 2018.--> <sdk:size>365009313</sdk:size> <sdk:checksum type="sha1">7cbc291483ca07dc67b71268c5f08a5755f50f51</sdk:checksum> <sdk:url>x86_64-23_r10.zip</sdk:url> @@ -888,7 +942,7 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:revision>8</sdk:revision> <sdk:archives> <sdk:archive> - <!--Built on: Thu Jul 13 12:51:15 2017.--> + <!--Built on: Sat Jun 16 05:29:19 2018.--> <sdk:size>419261998</sdk:size> <sdk:checksum type="sha1">f6559e1949a5879f31a9662f4f0e50ad60181684</sdk:checksum> <sdk:url>x86_64-24_r08.zip</sdk:url> @@ -898,4 +952,75 @@ ANY PRE-RELEASE MATERIALS ARE NON-QUALIFIED AND, AS SUCH, ARE PROVIDED “AS IS <sdk:abi>x86_64</sdk:abi> <sdk:tag-id>default</sdk:tag-id> </sdk:system-image> + <sdk:system-image> + <!--Generated from bid:4931657, branch:git_nyc-mr1-emu-release--> + <sdk:api-level>25</sdk:api-level> + <sdk:description>Intel x86 Atom_64 System Image</sdk:description> + <sdk:revision>1</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Tue Aug 7 14:06:13 2018.--> + <sdk:size>422702097</sdk:size> + <sdk:checksum type="sha1">7093d7b39216020226ff430a3b7b81c94d31ad37</sdk:checksum> + <sdk:url>x86_64-25_r01.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + <sdk:abi>x86_64</sdk:abi> + <sdk:tag-id>default</sdk:tag-id> + </sdk:system-image> + <sdk:system-image> + <!--Generated from bid:4931640, branch:git_oc-emu-release--> + <sdk:api-level>26</sdk:api-level> + <sdk:description>Intel x86 Atom_64 System Image</sdk:description> + <sdk:revision>1</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Tue Aug 7 14:06:52 2018.--> + <sdk:size>474178332</sdk:size> + <sdk:checksum type="sha1">432f149c048bffce7f9de526ec65b336daf7a0a3</sdk:checksum> + <sdk:url>x86_64-26_r01.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + <sdk:abi>x86_64</sdk:abi> + <sdk:tag-id>default</sdk:tag-id> + <sdk:tag-display>Default Android System Image</sdk:tag-display> + </sdk:system-image> + <sdk:system-image> + <!--Generated from bid:4931629, branch:git_oc-mr1-emu-release--> + <sdk:api-level>27</sdk:api-level> + <sdk:description>Intel x86 Atom_64 System Image</sdk:description> + <sdk:revision>1</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Tue Aug 7 14:07:35 2018.--> + <sdk:size>491675204</sdk:size> + <sdk:checksum type="sha1">2878261011a59ca3de29dc5b457a495fdb268d60</sdk:checksum> + <sdk:url>x86_64-27_r01.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-license"/> + <sdk:abi>x86_64</sdk:abi> + <sdk:tag-id>default</sdk:tag-id> + <sdk:tag-display>Default Android System Image</sdk:tag-display> + </sdk:system-image> + <sdk:system-image> + <!--Generated from bid:4923214, branch:git_pi-emu-release--> + <sdk:api-level>28</sdk:api-level> + <sdk:description>Intel x86 Atom_64 System Image</sdk:description> + <sdk:revision>4</sdk:revision> + <sdk:archives> + <sdk:archive> + <!--Built on: Tue Jul 31 17:43:48 2018.--> + <sdk:size>564792723</sdk:size> + <sdk:checksum type="sha1">d47a85c8f4e9fd57df97814ad8884eeb0f3a0ef0</sdk:checksum> + <sdk:url>x86_64-28_r04.zip</sdk:url> + </sdk:archive> + </sdk:archives> + <sdk:uses-license ref="android-sdk-preview-license"/> + <sdk:abi>x86_64</sdk:abi> + <sdk:tag-id>default</sdk:tag-id> + <sdk:tag-display>Default Android System Image</sdk:tag-display> + </sdk:system-image> </sdk:sdk-sys-img> diff --git a/pkgs/development/mobile/androidenv/sysimages.nix b/pkgs/development/mobile/androidenv/sysimages.nix index c5d075d63076..0ad09a025562 100644 --- a/pkgs/development/mobile/androidenv/sysimages.nix +++ b/pkgs/development/mobile/androidenv/sysimages.nix @@ -47,14 +47,6 @@ in }; }; - sysimg_mips_15 = buildSystemImage { - name = "sysimg-mips-15"; - src = fetchurl { - url = https://dl.google.com/android/repository/sys-img/android/sysimg_mips-15_r01.zip; - sha1 = "a753bb4a6783124dad726c500ce9aec9d2c1b2d9"; - }; - }; - sysimg_x86_15 = buildSystemImage { name = "sysimg-x86-15"; src = fetchurl { @@ -82,8 +74,8 @@ in sysimg_x86_16 = buildSystemImage { name = "sysimg-x86-16"; src = fetchurl { - url = https://dl.google.com/android/repository/sys-img/android/x86-16_r05.zip; - sha1 = "7ea16da3a8fdb880b1b290190fcc1bde2821c1e0"; + url = https://dl.google.com/android/repository/sys-img/android/x86-16_r06.zip; + sha1 = "bf1bf8c5591346118d2235da1ad20e7be8a3e9cd"; }; }; @@ -106,8 +98,8 @@ in sysimg_x86_17 = buildSystemImage { name = "sysimg-x86-17"; src = fetchurl { - url = https://dl.google.com/android/repository/sys-img/android/x86-17_r03.zip; - sha1 = "eb30274460ff0d61f3ed37862b567811bebd8270"; + url = https://dl.google.com/android/repository/sys-img/android/x86-17_r04.zip; + sha1 = "03c6d022ab2dcbbcf655d78ba5ccb0431cadcaec"; }; }; @@ -250,17 +242,64 @@ in sysimg_x86_25 = buildSystemImage { name = "sysimg-x86-25"; src = fetchurl { - url = https://dl.google.com/android/repository/sys-img/android/x86-25_r03.zip; - sha1 = "7dd19cfee4e43a1f60e0f5f058404d92d9544b33"; + url = https://dl.google.com/android/repository/sys-img/android/x86-25_r01.zip; + sha1 = "78ce7eb1387d598685633b9f7cbb300c3d3aeb5f"; }; }; sysimg_x86_64_25 = buildSystemImage { name = "sysimg-x86_64-25"; src = fetchurl { - url = https://dl.google.com/android/repository/sys-img/android/x86_64-25_r03.zip; - sha1 = "4593ee04811df21c339f3374fc5917843db06f8d"; + url = https://dl.google.com/android/repository/sys-img/android/x86_64-25_r01.zip; + sha1 = "7093d7b39216020226ff430a3b7b81c94d31ad37"; }; }; -} + sysimg_x86_26 = buildSystemImage { + name = "sysimg-x86-26"; + src = fetchurl { + url = https://dl.google.com/android/repository/sys-img/android/x86-26_r01.zip; + sha1 = "e613d6e0da668e30daf547f3c6627a6352846f90"; + }; + }; + + sysimg_x86_64_26 = buildSystemImage { + name = "sysimg-x86_64-26"; + src = fetchurl { + url = https://dl.google.com/android/repository/sys-img/android/x86_64-26_r01.zip; + sha1 = "432f149c048bffce7f9de526ec65b336daf7a0a3"; + }; + }; + + sysimg_x86_27 = buildSystemImage { + name = "sysimg-x86-27"; + src = fetchurl { + url = https://dl.google.com/android/repository/sys-img/android/x86-27_r01.zip; + sha1 = "4ec990fac7b62958decd12e18a4cd389dfe7c582"; + }; + }; + + sysimg_x86_64_27 = buildSystemImage { + name = "sysimg-x86_64-27"; + src = fetchurl { + url = https://dl.google.com/android/repository/sys-img/android/x86_64-27_r01.zip; + sha1 = "2878261011a59ca3de29dc5b457a495fdb268d60"; + }; + }; + + sysimg_x86_28 = buildSystemImage { + name = "sysimg-x86-28"; + src = fetchurl { + url = https://dl.google.com/android/repository/sys-img/android/x86-28_r04.zip; + sha1 = "ce03c42d80c0fc6dc47f6455dbee7aa275d02780"; + }; + }; + + sysimg_x86_64_28 = buildSystemImage { + name = "sysimg-x86_64-28"; + src = fetchurl { + url = https://dl.google.com/android/repository/sys-img/android/x86_64-28_r04.zip; + sha1 = "d47a85c8f4e9fd57df97814ad8884eeb0f3a0ef0"; + }; + }; +} diff --git a/pkgs/development/mobile/xpwn/default.nix b/pkgs/development/mobile/xpwn/default.nix index d5ffb7f6c017..d62902e4f6e4 100644 --- a/pkgs/development/mobile/xpwn/default.nix +++ b/pkgs/development/mobile/xpwn/default.nix @@ -20,10 +20,6 @@ stdenv.mkDerivation { buildInputs = [ cmake zlib libpng bzip2 libusb openssl ]; - cmakeFlags = [ - "-DCMAKE_OSX_DEPLOYMENT_TARGET=" - ]; - meta = with stdenv.lib; { homepage = "http://planetbeing.lighthouseapp.com/projects/15246-xpwn"; description = "Custom NOR firmware loader/IPSW generator for the iPhone"; diff --git a/pkgs/development/node-packages/default-v8.nix b/pkgs/development/node-packages/default-v8.nix index 020992c86844..f7d3e3c908f8 100644 --- a/pkgs/development/node-packages/default-v8.nix +++ b/pkgs/development/node-packages/default-v8.nix @@ -49,6 +49,10 @@ nodePackages // { buildInputs = [ pkgs.phantomjs2 ]; }; + git-ssb = nodePackages.git-ssb.override { + buildInputs = [ nodePackages.node-gyp-build ]; + }; + node-inspector = nodePackages.node-inspector.override { buildInputs = [ nodePackages.node-pre-gyp ]; }; @@ -82,6 +86,10 @@ nodePackages // { ''; }; + scuttlebot = nodePackages.scuttlebot.override { + buildInputs = [ pkgs.automake pkgs.autoconf nodePackages.node-gyp-build ]; + }; + statsd = nodePackages.statsd.override { # broken with node v8, dead upstream, # see #45946 and https://github.com/etsy/statsd/issues/646 diff --git a/pkgs/development/node-packages/node-packages-v10.nix b/pkgs/development/node-packages/node-packages-v10.nix index e94e8bfff1ed..d029fc74d696 100644 --- a/pkgs/development/node-packages/node-packages-v10.nix +++ b/pkgs/development/node-packages/node-packages-v10.nix @@ -283,15 +283,6 @@ let sha1 = "4bc0373c164bc3291b4d368c829cf1a80a59dca0"; }; }; - "combined-stream-1.0.6" = { - name = "combined-stream"; - packageName = "combined-stream"; - version = "1.0.6"; - src = fetchurl { - url = "http://registry.npmjs.org/combined-stream/-/combined-stream-1.0.6.tgz"; - sha1 = "723e7df6e801ac5613113a7e445a9b69cb632818"; - }; - }; "combined-stream-1.0.7" = { name = "combined-stream"; packageName = "combined-stream"; @@ -522,7 +513,7 @@ let packageName = "fast-deep-equal"; version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/fast-deep-equal/-/fast-deep-equal-1.1.0.tgz"; + url = "http://registry.npmjs.org/fast-deep-equal/-/fast-deep-equal-1.1.0.tgz"; sha1 = "c053477817c86b51daa853c81e059b733d023614"; }; }; @@ -598,13 +589,13 @@ let sha1 = "fbc71f0c41adeb37f96c577ad1ed42d8fdacca91"; }; }; - "form-data-2.3.2" = { + "form-data-2.3.3" = { name = "form-data"; packageName = "form-data"; - version = "2.3.2"; + version = "2.3.3"; src = fetchurl { - url = "https://registry.npmjs.org/form-data/-/form-data-2.3.2.tgz"; - sha1 = "4970498be604c20c005d4f5c23aecd21d6b49099"; + url = "https://registry.npmjs.org/form-data/-/form-data-2.3.3.tgz"; + sha512 = "1lLKB2Mu3aGP1Q/2eCOx0fNbRMe7XdwktwOruhfqqd0rIJWwN4Dh+E3hrPSlDCXnSR7UtZ1N38rVXm+6+MEhJQ=="; }; }; "fragment-cache-0.2.1" = { @@ -697,13 +688,13 @@ let sha1 = "dbf743c6c14992593c655568cb66ed32c0122ebe"; }; }; - "graceful-fs-4.1.11" = { + "graceful-fs-4.1.15" = { name = "graceful-fs"; packageName = "graceful-fs"; - version = "4.1.11"; + version = "4.1.15"; src = fetchurl { - url = "https://registry.npmjs.org/graceful-fs/-/graceful-fs-4.1.11.tgz"; - sha1 = "0e8bdfe4d1ddb8854d64e04ea7c00e2a026e5658"; + url = "https://registry.npmjs.org/graceful-fs/-/graceful-fs-4.1.15.tgz"; + sha512 = "6uHUhOPEBgQ24HM+r6b/QwWfZq+yiFcipKFrOFiBEnWdy5sdzYoi+pJeQaPI5qOLRFqWmAXUPQNsielzdLoecA=="; }; }; "grunt-known-options-1.1.1" = { @@ -1192,22 +1183,22 @@ let sha512 = "MWikgl9n9M3w+bpsY3He8L+w9eF9338xRl8IAO5viDizwSzziFEyUzo2xrrloB64ADbTf8uA8vRqqttDTOmccg=="; }; }; - "mime-db-1.36.0" = { + "mime-db-1.37.0" = { name = "mime-db"; packageName = "mime-db"; - version = "1.36.0"; + version = "1.37.0"; src = fetchurl { - url = "https://registry.npmjs.org/mime-db/-/mime-db-1.36.0.tgz"; - sha512 = "L+xvyD9MkoYMXb1jAmzI/lWYAxAMCPvIBSWur0PZ5nOf5euahRLVqH//FKW9mWp2lkqUgYiXPgkzfMUFi4zVDw=="; + url = "https://registry.npmjs.org/mime-db/-/mime-db-1.37.0.tgz"; + sha512 = "R3C4db6bgQhlIhPU48fUtdVmKnflq+hRdad7IyKhtFj06VPNVdk2RhiYL3UjQIlso8L+YxAtFkobT0VK+S/ybg=="; }; }; - "mime-types-2.1.20" = { + "mime-types-2.1.21" = { name = "mime-types"; packageName = "mime-types"; - version = "2.1.20"; + version = "2.1.21"; src = fetchurl { - url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.20.tgz"; - sha512 = "HrkrPaP9vGuWbLK1B1FfgAkbqNjIuy4eHlIYnFi7kamZyLLrGlo2mpcx0bBmNpKqBtYtAfGbodDddIgddSJC2A=="; + url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.21.tgz"; + sha512 = "3iL6DbwpyLzjR3xHSFNFeb9Nz/M8WDkX33t1GFQnFOllWk8pOrh/LSrB5OXlnlW5P9LH73X6loW/eogc+F5lJg=="; }; }; "minimatch-3.0.4" = { @@ -1237,13 +1228,13 @@ let sha1 = "a35008b20f41383eec1fb914f4cd5df79a264284"; }; }; - "minipass-2.3.4" = { + "minipass-2.3.5" = { name = "minipass"; packageName = "minipass"; - version = "2.3.4"; + version = "2.3.5"; src = fetchurl { - url = "https://registry.npmjs.org/minipass/-/minipass-2.3.4.tgz"; - sha512 = "mlouk1OHlaUE8Odt1drMtG1bAJA4ZA6B/ehysgV0LUIrDHdKgo1KorZq3pK0b/7Z7LJIQ12MNM6aC+Tn6lUZ5w=="; + url = "https://registry.npmjs.org/minipass/-/minipass-2.3.5.tgz"; + sha512 = "Gi1W4k059gyRbyVUZQ4mEqLm0YIUiGYfvxhF6SIlk3ui1WVxMTGfGdQ2SInh3PDrRTVvPKgULkpJtT4RH10+VA=="; }; }; "minizlib-1.1.1" = { @@ -1692,7 +1683,7 @@ let packageName = "safe-regex"; version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/safe-regex/-/safe-regex-1.1.0.tgz"; + url = "http://registry.npmjs.org/safe-regex/-/safe-regex-1.1.0.tgz"; sha1 = "40a3669f3b077d1e943d44629e157dd48023bf2e"; }; }; @@ -1831,13 +1822,13 @@ let sha512 = "NzNVhJDYpwceVVii8/Hu6DKfD2G+NrQHlS/V/qgv763EYudVwEcMQNxd2lh+0VrUByXN/oJkl5grOhYWvQUYiw=="; }; }; - "sshpk-1.15.1" = { + "sshpk-1.15.2" = { name = "sshpk"; packageName = "sshpk"; - version = "1.15.1"; + version = "1.15.2"; src = fetchurl { - url = "https://registry.npmjs.org/sshpk/-/sshpk-1.15.1.tgz"; - sha512 = "mSdgNUaidk+dRU5MhYtN9zebdzF2iG0cNPWy8HG+W8y+fT1JnSkh0fzzpjOa0L7P8i1Rscz38t0h4gPcKz43xA=="; + url = "https://registry.npmjs.org/sshpk/-/sshpk-1.15.2.tgz"; + sha512 = "Ra/OXQtuh0/enyl4ETZAfTaeksa6BXks5ZcjpSUNrjBr0DvrJKX+1fsKDPpT9TBXgHAFsa4510aNVgI8g/+SzA=="; }; }; "static-extend-0.1.2" = { @@ -1890,17 +1881,17 @@ let packageName = "tar"; version = "2.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/tar/-/tar-2.2.1.tgz"; + url = "http://registry.npmjs.org/tar/-/tar-2.2.1.tgz"; sha1 = "8e4d2a256c0e2185c6b18ad694aec968b83cb1d1"; }; }; - "tar-4.4.6" = { + "tar-4.4.7" = { name = "tar"; packageName = "tar"; - version = "4.4.6"; + version = "4.4.7"; src = fetchurl { - url = "https://registry.npmjs.org/tar/-/tar-4.4.6.tgz"; - sha512 = "tMkTnh9EdzxyfW+6GK6fCahagXsnYk6kE6S9Gr9pjVdys769+laCTbodXDhPAjzVtEBazRgP0gYqOjnk9dQzLg=="; + url = "https://registry.npmjs.org/tar/-/tar-4.4.7.tgz"; + sha512 = "mR3MzsCdN0IEWjZRuF/J9gaWHnTwOvzjqPTcvi1xXgfKTDQRp39gRETPQEfPByAdEOGmZfx1HrRsn8estaEvtA=="; }; }; "to-object-path-0.3.0" = { @@ -2020,13 +2011,13 @@ let sha512 = "yXJmeNaw3DnnKAOKJE51sL/ZaYfWJRl1pK9dr19YFCu0ObS231AB1/LbqTKRAQ5kw8A90rA6fr4riOUpTZvQZA=="; }; }; - "v8flags-3.0.2" = { + "v8flags-3.1.1" = { name = "v8flags"; packageName = "v8flags"; - version = "3.0.2"; + version = "3.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/v8flags/-/v8flags-3.0.2.tgz"; - sha512 = "6sgSKoFw1UpUPd3cFdF7QGnrH6tDeBgW1F3v9gy8gLY0mlbiBXq8soy8aQpY6xeeCjH5K+JvC62Acp7gtl7wWA=="; + url = "https://registry.npmjs.org/v8flags/-/v8flags-3.1.1.tgz"; + sha512 = "iw/1ViSEaff8NJ3HLyEjawk/8hjJib3E7pvG4pddVXfUg1983s3VGsiClDjhK64MQVDGqc1Q8r18S4VKQZS9EQ=="; }; }; "verror-1.10.0" = { @@ -2114,10 +2105,10 @@ in grunt-cli = nodeEnv.buildNodePackage { name = "grunt-cli"; packageName = "grunt-cli"; - version = "1.3.1"; + version = "1.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/grunt-cli/-/grunt-cli-1.3.1.tgz"; - sha512 = "UwBRu/QpAjDc53DRLEkyilFdL0zenpxu+fddTIlsF/KJqdNcHaQmvyu1W3cDesZ9rqqZdKK5A8+QDIyLUEWoZQ=="; + url = "https://registry.npmjs.org/grunt-cli/-/grunt-cli-1.3.2.tgz"; + sha512 = "8OHDiZZkcptxVXtMfDxJvmN7MVJNE8L/yIcPb4HB7TlyFD1kDvjHrb62uhySsU14wJx9ORMnTuhRMQ40lH/orQ=="; }; dependencies = [ sources."abbrev-1.1.1" @@ -2369,7 +2360,7 @@ in }) sources."urix-0.1.0" sources."use-3.1.1" - sources."v8flags-3.0.2" + sources."v8flags-3.1.1" sources."which-1.3.1" ]; buildInputs = globalBuildInputs; @@ -2420,17 +2411,13 @@ in sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fs.realpath-1.0.0" sources."fstream-1.0.11" sources."gauge-2.7.4" sources."getpass-0.1.7" sources."glob-7.1.3" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" sources."has-unicode-2.0.1" @@ -2447,8 +2434,8 @@ in sources."json-schema-traverse-0.3.1" sources."json-stringify-safe-5.0.1" sources."jsprim-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -2475,7 +2462,7 @@ in sources."semver-5.3.0" sources."set-blocking-2.0.0" sources."signal-exit-3.0.2" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."string-width-1.0.2" sources."string_decoder-1.1.1" sources."strip-ansi-3.0.1" @@ -2554,7 +2541,7 @@ in sources."isarray-1.0.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" - sources."minipass-2.3.4" + sources."minipass-2.3.5" sources."minizlib-1.1.1" sources."mkdirp-0.5.1" sources."ms-2.0.0" @@ -2588,7 +2575,7 @@ in sources."string_decoder-1.1.1" sources."strip-ansi-3.0.1" sources."strip-json-comments-2.0.1" - sources."tar-4.4.6" + sources."tar-4.4.7" sources."util-deprecate-1.0.2" sources."wide-align-1.1.3" sources."wrappy-1.0.2" @@ -2606,10 +2593,10 @@ in pnpm = nodeEnv.buildNodePackage { name = "pnpm"; packageName = "pnpm"; - version = "2.16.3"; + version = "2.17.7"; src = fetchurl { - url = "https://registry.npmjs.org/pnpm/-/pnpm-2.16.3.tgz"; - sha512 = "W63qZOC9YGr+33JYvZjvhzvYL4YKT2gAywDJQrHvKTL6vmnnSh+GdM3ZdGIIZ6A57YB3NgvQaq/BJ2uYjwn3ZQ=="; + url = "https://registry.npmjs.org/pnpm/-/pnpm-2.17.7.tgz"; + sha512 = "FwZFpKSL4BNu1IGIScveHqZALpm6jSF7QR90CZXW4RfKaLpNYcIkkFC9iPBT4AdpPSv1UR/gYUWyQdTZBx2a5g=="; }; buildInputs = globalBuildInputs; meta = { diff --git a/pkgs/development/node-packages/node-packages-v6.nix b/pkgs/development/node-packages/node-packages-v6.nix index dc028435ad0a..bdf4997c1743 100644 --- a/pkgs/development/node-packages/node-packages-v6.nix +++ b/pkgs/development/node-packages/node-packages-v6.nix @@ -283,15 +283,6 @@ let sha1 = "4bc0373c164bc3291b4d368c829cf1a80a59dca0"; }; }; - "combined-stream-1.0.6" = { - name = "combined-stream"; - packageName = "combined-stream"; - version = "1.0.6"; - src = fetchurl { - url = "http://registry.npmjs.org/combined-stream/-/combined-stream-1.0.6.tgz"; - sha1 = "723e7df6e801ac5613113a7e445a9b69cb632818"; - }; - }; "combined-stream-1.0.7" = { name = "combined-stream"; packageName = "combined-stream"; @@ -522,7 +513,7 @@ let packageName = "fast-deep-equal"; version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/fast-deep-equal/-/fast-deep-equal-1.1.0.tgz"; + url = "http://registry.npmjs.org/fast-deep-equal/-/fast-deep-equal-1.1.0.tgz"; sha1 = "c053477817c86b51daa853c81e059b733d023614"; }; }; @@ -598,13 +589,13 @@ let sha1 = "fbc71f0c41adeb37f96c577ad1ed42d8fdacca91"; }; }; - "form-data-2.3.2" = { + "form-data-2.3.3" = { name = "form-data"; packageName = "form-data"; - version = "2.3.2"; + version = "2.3.3"; src = fetchurl { - url = "https://registry.npmjs.org/form-data/-/form-data-2.3.2.tgz"; - sha1 = "4970498be604c20c005d4f5c23aecd21d6b49099"; + url = "https://registry.npmjs.org/form-data/-/form-data-2.3.3.tgz"; + sha512 = "1lLKB2Mu3aGP1Q/2eCOx0fNbRMe7XdwktwOruhfqqd0rIJWwN4Dh+E3hrPSlDCXnSR7UtZ1N38rVXm+6+MEhJQ=="; }; }; "fragment-cache-0.2.1" = { @@ -697,13 +688,13 @@ let sha1 = "dbf743c6c14992593c655568cb66ed32c0122ebe"; }; }; - "graceful-fs-4.1.11" = { + "graceful-fs-4.1.15" = { name = "graceful-fs"; packageName = "graceful-fs"; - version = "4.1.11"; + version = "4.1.15"; src = fetchurl { - url = "https://registry.npmjs.org/graceful-fs/-/graceful-fs-4.1.11.tgz"; - sha1 = "0e8bdfe4d1ddb8854d64e04ea7c00e2a026e5658"; + url = "https://registry.npmjs.org/graceful-fs/-/graceful-fs-4.1.15.tgz"; + sha512 = "6uHUhOPEBgQ24HM+r6b/QwWfZq+yiFcipKFrOFiBEnWdy5sdzYoi+pJeQaPI5qOLRFqWmAXUPQNsielzdLoecA=="; }; }; "grunt-known-options-1.1.1" = { @@ -1192,22 +1183,22 @@ let sha512 = "MWikgl9n9M3w+bpsY3He8L+w9eF9338xRl8IAO5viDizwSzziFEyUzo2xrrloB64ADbTf8uA8vRqqttDTOmccg=="; }; }; - "mime-db-1.36.0" = { + "mime-db-1.37.0" = { name = "mime-db"; packageName = "mime-db"; - version = "1.36.0"; + version = "1.37.0"; src = fetchurl { - url = "https://registry.npmjs.org/mime-db/-/mime-db-1.36.0.tgz"; - sha512 = "L+xvyD9MkoYMXb1jAmzI/lWYAxAMCPvIBSWur0PZ5nOf5euahRLVqH//FKW9mWp2lkqUgYiXPgkzfMUFi4zVDw=="; + url = "https://registry.npmjs.org/mime-db/-/mime-db-1.37.0.tgz"; + sha512 = "R3C4db6bgQhlIhPU48fUtdVmKnflq+hRdad7IyKhtFj06VPNVdk2RhiYL3UjQIlso8L+YxAtFkobT0VK+S/ybg=="; }; }; - "mime-types-2.1.20" = { + "mime-types-2.1.21" = { name = "mime-types"; packageName = "mime-types"; - version = "2.1.20"; + version = "2.1.21"; src = fetchurl { - url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.20.tgz"; - sha512 = "HrkrPaP9vGuWbLK1B1FfgAkbqNjIuy4eHlIYnFi7kamZyLLrGlo2mpcx0bBmNpKqBtYtAfGbodDddIgddSJC2A=="; + url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.21.tgz"; + sha512 = "3iL6DbwpyLzjR3xHSFNFeb9Nz/M8WDkX33t1GFQnFOllWk8pOrh/LSrB5OXlnlW5P9LH73X6loW/eogc+F5lJg=="; }; }; "minimatch-3.0.4" = { @@ -1237,13 +1228,13 @@ let sha1 = "a35008b20f41383eec1fb914f4cd5df79a264284"; }; }; - "minipass-2.3.4" = { + "minipass-2.3.5" = { name = "minipass"; packageName = "minipass"; - version = "2.3.4"; + version = "2.3.5"; src = fetchurl { - url = "https://registry.npmjs.org/minipass/-/minipass-2.3.4.tgz"; - sha512 = "mlouk1OHlaUE8Odt1drMtG1bAJA4ZA6B/ehysgV0LUIrDHdKgo1KorZq3pK0b/7Z7LJIQ12MNM6aC+Tn6lUZ5w=="; + url = "https://registry.npmjs.org/minipass/-/minipass-2.3.5.tgz"; + sha512 = "Gi1W4k059gyRbyVUZQ4mEqLm0YIUiGYfvxhF6SIlk3ui1WVxMTGfGdQ2SInh3PDrRTVvPKgULkpJtT4RH10+VA=="; }; }; "minizlib-1.1.1" = { @@ -1692,7 +1683,7 @@ let packageName = "safe-regex"; version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/safe-regex/-/safe-regex-1.1.0.tgz"; + url = "http://registry.npmjs.org/safe-regex/-/safe-regex-1.1.0.tgz"; sha1 = "40a3669f3b077d1e943d44629e157dd48023bf2e"; }; }; @@ -1831,13 +1822,13 @@ let sha512 = "NzNVhJDYpwceVVii8/Hu6DKfD2G+NrQHlS/V/qgv763EYudVwEcMQNxd2lh+0VrUByXN/oJkl5grOhYWvQUYiw=="; }; }; - "sshpk-1.15.1" = { + "sshpk-1.15.2" = { name = "sshpk"; packageName = "sshpk"; - version = "1.15.1"; + version = "1.15.2"; src = fetchurl { - url = "https://registry.npmjs.org/sshpk/-/sshpk-1.15.1.tgz"; - sha512 = "mSdgNUaidk+dRU5MhYtN9zebdzF2iG0cNPWy8HG+W8y+fT1JnSkh0fzzpjOa0L7P8i1Rscz38t0h4gPcKz43xA=="; + url = "https://registry.npmjs.org/sshpk/-/sshpk-1.15.2.tgz"; + sha512 = "Ra/OXQtuh0/enyl4ETZAfTaeksa6BXks5ZcjpSUNrjBr0DvrJKX+1fsKDPpT9TBXgHAFsa4510aNVgI8g/+SzA=="; }; }; "static-extend-0.1.2" = { @@ -1890,17 +1881,17 @@ let packageName = "tar"; version = "2.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/tar/-/tar-2.2.1.tgz"; + url = "http://registry.npmjs.org/tar/-/tar-2.2.1.tgz"; sha1 = "8e4d2a256c0e2185c6b18ad694aec968b83cb1d1"; }; }; - "tar-4.4.6" = { + "tar-4.4.7" = { name = "tar"; packageName = "tar"; - version = "4.4.6"; + version = "4.4.7"; src = fetchurl { - url = "https://registry.npmjs.org/tar/-/tar-4.4.6.tgz"; - sha512 = "tMkTnh9EdzxyfW+6GK6fCahagXsnYk6kE6S9Gr9pjVdys769+laCTbodXDhPAjzVtEBazRgP0gYqOjnk9dQzLg=="; + url = "https://registry.npmjs.org/tar/-/tar-4.4.7.tgz"; + sha512 = "mR3MzsCdN0IEWjZRuF/J9gaWHnTwOvzjqPTcvi1xXgfKTDQRp39gRETPQEfPByAdEOGmZfx1HrRsn8estaEvtA=="; }; }; "to-object-path-0.3.0" = { @@ -2020,13 +2011,13 @@ let sha512 = "yXJmeNaw3DnnKAOKJE51sL/ZaYfWJRl1pK9dr19YFCu0ObS231AB1/LbqTKRAQ5kw8A90rA6fr4riOUpTZvQZA=="; }; }; - "v8flags-3.0.2" = { + "v8flags-3.1.1" = { name = "v8flags"; packageName = "v8flags"; - version = "3.0.2"; + version = "3.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/v8flags/-/v8flags-3.0.2.tgz"; - sha512 = "6sgSKoFw1UpUPd3cFdF7QGnrH6tDeBgW1F3v9gy8gLY0mlbiBXq8soy8aQpY6xeeCjH5K+JvC62Acp7gtl7wWA=="; + url = "https://registry.npmjs.org/v8flags/-/v8flags-3.1.1.tgz"; + sha512 = "iw/1ViSEaff8NJ3HLyEjawk/8hjJib3E7pvG4pddVXfUg1983s3VGsiClDjhK64MQVDGqc1Q8r18S4VKQZS9EQ=="; }; }; "verror-1.10.0" = { @@ -2114,10 +2105,10 @@ in grunt-cli = nodeEnv.buildNodePackage { name = "grunt-cli"; packageName = "grunt-cli"; - version = "1.3.1"; + version = "1.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/grunt-cli/-/grunt-cli-1.3.1.tgz"; - sha512 = "UwBRu/QpAjDc53DRLEkyilFdL0zenpxu+fddTIlsF/KJqdNcHaQmvyu1W3cDesZ9rqqZdKK5A8+QDIyLUEWoZQ=="; + url = "https://registry.npmjs.org/grunt-cli/-/grunt-cli-1.3.2.tgz"; + sha512 = "8OHDiZZkcptxVXtMfDxJvmN7MVJNE8L/yIcPb4HB7TlyFD1kDvjHrb62uhySsU14wJx9ORMnTuhRMQ40lH/orQ=="; }; dependencies = [ sources."abbrev-1.1.1" @@ -2369,7 +2360,7 @@ in }) sources."urix-0.1.0" sources."use-3.1.1" - sources."v8flags-3.0.2" + sources."v8flags-3.1.1" sources."which-1.3.1" ]; buildInputs = globalBuildInputs; @@ -2420,17 +2411,13 @@ in sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fs.realpath-1.0.0" sources."fstream-1.0.11" sources."gauge-2.7.4" sources."getpass-0.1.7" sources."glob-7.1.3" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" sources."has-unicode-2.0.1" @@ -2447,8 +2434,8 @@ in sources."json-schema-traverse-0.3.1" sources."json-stringify-safe-5.0.1" sources."jsprim-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -2475,7 +2462,7 @@ in sources."semver-5.3.0" sources."set-blocking-2.0.0" sources."signal-exit-3.0.2" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."string-width-1.0.2" sources."string_decoder-1.1.1" sources."strip-ansi-3.0.1" @@ -2554,7 +2541,7 @@ in sources."isarray-1.0.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" - sources."minipass-2.3.4" + sources."minipass-2.3.5" sources."minizlib-1.1.1" sources."mkdirp-0.5.1" sources."ms-2.0.0" @@ -2588,7 +2575,7 @@ in sources."string_decoder-1.1.1" sources."strip-ansi-3.0.1" sources."strip-json-comments-2.0.1" - sources."tar-4.4.6" + sources."tar-4.4.7" sources."util-deprecate-1.0.2" sources."wide-align-1.1.3" sources."wrappy-1.0.2" @@ -2606,10 +2593,10 @@ in pnpm = nodeEnv.buildNodePackage { name = "pnpm"; packageName = "pnpm"; - version = "2.16.3"; + version = "2.17.7"; src = fetchurl { - url = "https://registry.npmjs.org/pnpm/-/pnpm-2.16.3.tgz"; - sha512 = "W63qZOC9YGr+33JYvZjvhzvYL4YKT2gAywDJQrHvKTL6vmnnSh+GdM3ZdGIIZ6A57YB3NgvQaq/BJ2uYjwn3ZQ=="; + url = "https://registry.npmjs.org/pnpm/-/pnpm-2.17.7.tgz"; + sha512 = "FwZFpKSL4BNu1IGIScveHqZALpm6jSF7QR90CZXW4RfKaLpNYcIkkFC9iPBT4AdpPSv1UR/gYUWyQdTZBx2a5g=="; }; buildInputs = globalBuildInputs; meta = { diff --git a/pkgs/development/node-packages/node-packages-v8.json b/pkgs/development/node-packages/node-packages-v8.json index f297614ec38f..5e89c8e3e35b 100644 --- a/pkgs/development/node-packages/node-packages-v8.json +++ b/pkgs/development/node-packages/node-packages-v8.json @@ -2,6 +2,7 @@ "alloy" , "asar" , "azure-cli" +, "azure-functions-core-tools" , "bower" , "bower2nix" , "browserify" @@ -119,6 +120,7 @@ , "tiddlywiki" , "titanium" , "triton" +, "ttf2eot" , "typescript" , "typings" , "uglify-js" diff --git a/pkgs/development/node-packages/node-packages-v8.nix b/pkgs/development/node-packages/node-packages-v8.nix index 4a6c248e2952..443c011c95d8 100644 --- a/pkgs/development/node-packages/node-packages-v8.nix +++ b/pkgs/development/node-packages/node-packages-v8.nix @@ -22,13 +22,13 @@ let sha512 = "tGAp3ULNyoA8b5o9LsU2Lq6SwgVPUOKAqKywu2liEtTvrFSGPrObwanhYwArq3GPeOqp2bi+JknSJCIU3oQN1Q=="; }; }; - "@apollographql/graphql-playground-html-1.6.0" = { + "@apollographql/graphql-playground-html-1.6.4" = { name = "_at_apollographql_slash_graphql-playground-html"; packageName = "@apollographql/graphql-playground-html"; - version = "1.6.0"; + version = "1.6.4"; src = fetchurl { - url = "https://registry.npmjs.org/@apollographql/graphql-playground-html/-/graphql-playground-html-1.6.0.tgz"; - sha512 = "QAZIFrfVRkjvMkUHIQKZXZ3La0V5t12w5PWrhihYEabHwzIZV/txQd/kSYHgYPXC4s5OURxsXZop9f0BzI2QIQ=="; + url = "https://registry.npmjs.org/@apollographql/graphql-playground-html/-/graphql-playground-html-1.6.4.tgz"; + sha512 = "gwvaQO6/Hv4DEwhDLmmu2tzCU9oPjC5Xl9Kk8Yd0IxyKhYLlLalmkMMjsZLzU5H3fGaalLD96OYfxHL0ClVUDQ=="; }; }; "@babel/code-frame-7.0.0" = { @@ -76,15 +76,6 @@ let sha512 = "gqmspPZOMW3MIRb9HlrnbZHXI1/KHTOroBwN1NcLL6pWxzqzEKGvRTq0W/PxS45OtQGbaFikSQpkS5zbnsQm2w=="; }; }; - "@babel/runtime-7.1.2" = { - name = "_at_babel_slash_runtime"; - packageName = "@babel/runtime"; - version = "7.1.2"; - src = fetchurl { - url = "https://registry.npmjs.org/@babel/runtime/-/runtime-7.1.2.tgz"; - sha512 = "Y3SCjmhSupzFB6wcv1KmmFucH6gDVnI30WjOcicV10ju0cZjak3Jcs67YLIXBrmZYw1xCrVeJPbycFwrqNyxpg=="; - }; - }; "@babel/runtime-corejs2-7.1.2" = { name = "_at_babel_slash_runtime-corejs2"; packageName = "@babel/runtime-corejs2"; @@ -346,40 +337,40 @@ let sha1 = "890ae7c5d8c877f6d384860215ace9d7ec945bda"; }; }; - "@ionic/cli-framework-1.1.1" = { + "@ionic/cli-framework-1.3.0" = { name = "_at_ionic_slash_cli-framework"; packageName = "@ionic/cli-framework"; - version = "1.1.1"; + version = "1.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/@ionic/cli-framework/-/cli-framework-1.1.1.tgz"; - sha512 = "atY7TZO7Lh00iz9TIkEuzAg+h+onaf9tR5Xdq365grIDlOD6iRm1xAYKkLOzlObzNQ3WqDW5vqKmtiVrvg3Kfg=="; + url = "https://registry.npmjs.org/@ionic/cli-framework/-/cli-framework-1.3.0.tgz"; + sha512 = "hJVWOqZVJXD0pa1amVFPlX7emXdEM6YpbllXkMQwYSubt9TXPRgUboC3JYxvwEfTscnvWO5OnKGZ29f0/zpTQg=="; }; }; - "@ionic/discover-1.0.6" = { + "@ionic/discover-1.0.7" = { name = "_at_ionic_slash_discover"; packageName = "@ionic/discover"; - version = "1.0.6"; + version = "1.0.7"; src = fetchurl { - url = "https://registry.npmjs.org/@ionic/discover/-/discover-1.0.6.tgz"; - sha512 = "7OsJ4Kr6G9PWVOFdlfXuM7Cz39qFff60dOOzPpIwDXInive+jk42pZ9aKPz/3NMrwWULUOY8pSZ4leiZJNPFpg=="; + url = "https://registry.npmjs.org/@ionic/discover/-/discover-1.0.7.tgz"; + sha512 = "HaG36P0dfxkBqkL9HJknd4bGXe+4QczhcCbpr0CzDBUzWbmoi0meyzRvqhVf9jd1WtnPYsfcJ6mAtaeu+NIRUw=="; }; }; - "@ionic/utils-fs-0.0.3" = { + "@ionic/utils-fs-0.0.4" = { name = "_at_ionic_slash_utils-fs"; packageName = "@ionic/utils-fs"; - version = "0.0.3"; + version = "0.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/@ionic/utils-fs/-/utils-fs-0.0.3.tgz"; - sha512 = "nj976Lms/0ocagWkfizM/zSWwfYRMOnT+wgNO3B9LMW8OjOH/llxTulBvTih0epqgLl9jjU7moW310BeECVC4g=="; + url = "https://registry.npmjs.org/@ionic/utils-fs/-/utils-fs-0.0.4.tgz"; + sha512 = "eipaSkrX3ODCQzGKxFgruq2J28RoEm+JC0jJv5S64OXATxsnbwuReTmA2EMJyevLJrORWM0yvsgqmiLHH5VYJg=="; }; }; - "@ionic/utils-network-0.0.3" = { + "@ionic/utils-network-0.0.4" = { name = "_at_ionic_slash_utils-network"; packageName = "@ionic/utils-network"; - version = "0.0.3"; + version = "0.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/@ionic/utils-network/-/utils-network-0.0.3.tgz"; - sha512 = "jc71iYRTg+st9K39rHtT2FWcgtVP9QIWTaDt4o+WFDD1lUicscosFncx5DEzHsb3Shn24SgbiqhcfQ2F//nfyw=="; + url = "https://registry.npmjs.org/@ionic/utils-network/-/utils-network-0.0.4.tgz"; + sha512 = "xJrO+ZG8Gud6qcLy/nFtoaloZHUM94Xvt4boAyyzr+1IFlgPfstfpbjsOFgKu5yqhc1+JyqwNtdJ14jEC9F17A=="; }; }; "@kbrandwijk/swagger-to-graphql-2.4.3" = { @@ -841,13 +832,13 @@ let sha512 = "bPHp6Ji8b41szTOcaP63VlnbbO5Ny6dwAATtY6JTjh5N2OLrb5Qk/Th5cRkRQhkWCt+EJsYrNB0MiL+Gpn6e3g=="; }; }; - "@nodelib/fs.stat-1.1.2" = { + "@nodelib/fs.stat-1.1.3" = { name = "_at_nodelib_slash_fs.stat"; packageName = "@nodelib/fs.stat"; - version = "1.1.2"; + version = "1.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/@nodelib/fs.stat/-/fs.stat-1.1.2.tgz"; - sha512 = "yprFYuno9FtNsSHVlSWd+nRlmGoAbqbeCwOryP6sC/zoCjhpArcRMYp19EvpSUSizJAlsXEwJv+wcWS9XaXdMw=="; + url = "https://registry.npmjs.org/@nodelib/fs.stat/-/fs.stat-1.1.3.tgz"; + sha512 = "shAmDyaQC4H92APFoIaVDHCx5bStIocgvbwQyxPRrbUY20V1EYTbSDchWbuwlMG3V17cprZhA6+78JfB+3DTPw=="; }; }; "@protobufjs/aspromise-1.1.2" = { @@ -958,13 +949,13 @@ let sha512 = "jOdnI/3qTpHABjM5cx1Hc0sKsPoYCp+DP/GJRGtDlPd7fiV9oXGGIcjW/ZOxLIvjGz8MA+uMZI9metHlgqbgwQ=="; }; }; - "@types/async-2.0.49" = { + "@types/async-2.0.50" = { name = "_at_types_slash_async"; packageName = "@types/async"; - version = "2.0.49"; + version = "2.0.50"; src = fetchurl { - url = "http://registry.npmjs.org/@types/async/-/async-2.0.49.tgz"; - sha512 = "Benr3i5odUkvpFkOpzGqrltGdbSs+EVCkEBGXbuR7uT0VzhXKIkhem6PDzHdx5EonA+rfbB3QvP6aDOw5+zp5Q=="; + url = "https://registry.npmjs.org/@types/async/-/async-2.0.50.tgz"; + sha512 = "VMhZMMQgV1zsR+lX/0IBfAk+8Eb7dPVMWiQGFAt3qjo5x7Ml6b77jUo0e1C3ToD+XRDXqtrfw+6AB0uUsPEr3Q=="; }; }; "@types/babel-types-7.0.4" = { @@ -976,13 +967,13 @@ let sha512 = "WiZhq3SVJHFRgRYLXvpf65XnV6ipVHhnNaNvE8yCimejrGglkg38kEj0JcizqwSHxmPSjcTlig/6JouxLGEhGw=="; }; }; - "@types/babylon-6.16.3" = { + "@types/babylon-6.16.4" = { name = "_at_types_slash_babylon"; packageName = "@types/babylon"; - version = "6.16.3"; + version = "6.16.4"; src = fetchurl { - url = "https://registry.npmjs.org/@types/babylon/-/babylon-6.16.3.tgz"; - sha512 = "lyJ8sW1PbY3uwuvpOBZ9zMYKshMnQpXmeDHh8dj9j2nJm/xrW0FgB5gLSYOArj5X0IfaXnmhFoJnhS4KbqIMug=="; + url = "https://registry.npmjs.org/@types/babylon/-/babylon-6.16.4.tgz"; + sha512 = "8dZMcGPno3g7pJ/d0AyJERo+lXh9i1JhDuCUs+4lNIN9eUe5Yh6UCLrpgSEi05Ve2JMLauL2aozdvKwNL0px1Q=="; }; }; "@types/body-parser-1.17.0" = { @@ -1066,22 +1057,22 @@ let sha512 = "A2TAGbTFdBw9azHbpVd+/FkdW2T6msN1uct1O9bH3vTerEHKZhTXJUQXy+hNq1B0RagfU8U+KBdqiZpxjhOUQA=="; }; }; - 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url = "https://registry.npmjs.org/abstract-leveldown/-/abstract-leveldown-4.0.3.tgz"; + url = "http://registry.npmjs.org/abstract-leveldown/-/abstract-leveldown-4.0.3.tgz"; sha512 = "qsIHFQy0u17JqSY+3ZUT+ykqxYY17yOfvAsLkFkw8kSQqi05d1jyj0bCuSX6sjYlXuY9cKpgUt5EudQdP4aXyA=="; }; }; + "abstract-leveldown-5.0.0" = { + name = "abstract-leveldown"; + packageName = "abstract-leveldown"; + version = "5.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/abstract-leveldown/-/abstract-leveldown-5.0.0.tgz"; + sha512 = "5mU5P1gXtsMIXg65/rsYGsi93+MlogXZ9FA8JnwKurHQg64bfXwGYVdVdijNTVNOlAsuIiOwHdvFFD5JqCJQ7A=="; + }; + }; "abstract-random-access-1.1.2" = { name = "abstract-random-access"; packageName = "abstract-random-access"; @@ -1597,13 +1606,13 @@ let sha512 = "T/zvzYRfbVojPWahDsE5evJdHb3oJoQfFbsrKM7w5Zcs++Tr257tia3BmMP8XYVjp1S9RZXQMh7gao96BlqZOw=="; }; }; - "acorn-6.0.2" = { + "acorn-6.0.4" = { name = "acorn"; packageName = "acorn"; - version = "6.0.2"; + version = "6.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/acorn/-/acorn-6.0.2.tgz"; - sha512 = "GXmKIvbrN3TV7aVqAzVFaMW8F8wzVX7voEBRO3bDA64+EX37YSayggRJP5Xig6HYHBkWKpFg9W5gg6orklubhg=="; + url = "https://registry.npmjs.org/acorn/-/acorn-6.0.4.tgz"; + sha512 = "VY4i5EKSKkofY2I+6QLTbTTN/UvEQPCo6eiwzzSaSWfpaDhOmStMCMod6wmuPciNq+XS0faCglFu2lHZpdHUtg=="; }; }; "acorn-dynamic-import-3.0.0" = { @@ -1615,6 +1624,15 @@ let sha512 = "zVWV8Z8lislJoOKKqdNMOB+s6+XV5WERty8MnKBeFgwA+19XJjJHs2RP5dzM57FftIs+jQnRToLiWazKr6sSWg=="; }; }; + "acorn-dynamic-import-4.0.0" = { + name = "acorn-dynamic-import"; + packageName = "acorn-dynamic-import"; + version = "4.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/acorn-dynamic-import/-/acorn-dynamic-import-4.0.0.tgz"; + sha512 = "d3OEjQV4ROpoflsnUA8HozoIR504TFxNivYEUi6uwz0IYhBkTDXGuWlNdMtybRt3nqVx/L6XqMt0FxkXuWKZhw=="; + }; + }; "acorn-globals-1.0.9" = { name = "acorn-globals"; packageName = "acorn-globals"; @@ -1651,13 +1669,22 @@ let sha512 = "JY+iV6r+cO21KtntVvFkD+iqjtdpRUpGqKWgfkCdZq1R+kbreEl8EcdcJR4SmiIgsIQT33s6QzheQ9a275Q8xw=="; }; }; - "acorn-node-1.6.0" = { + "acorn-jsx-5.0.0" = { + name = "acorn-jsx"; + packageName = "acorn-jsx"; + version = "5.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/acorn-jsx/-/acorn-jsx-5.0.0.tgz"; + sha512 = "XkB50fn0MURDyww9+UYL3c1yLbOBz0ZFvrdYlGB8l+Ije1oSC75qAqrzSPjYQbdnQUzhlUGNKuesryAv0gxZOg=="; + }; + }; + "acorn-node-1.6.2" = { name = "acorn-node"; packageName = "acorn-node"; - version = "1.6.0"; + version = "1.6.2"; src = fetchurl { - url = "https://registry.npmjs.org/acorn-node/-/acorn-node-1.6.0.tgz"; - sha512 = "ZsysjEh+Y3i14f7YXCAKJy99RXbd56wHKYBzN4FlFtICIZyFpYwK6OwNJhcz8A/FMtxoUZkJofH1v9KIfNgWmw=="; + url = "https://registry.npmjs.org/acorn-node/-/acorn-node-1.6.2.tgz"; + sha512 = "rIhNEZuNI8ibQcL7ANm/mGyPukIaZsRNX9psFNQURyJW0nu6k8wjSDld20z6v2mDBWqX13pIEnk9gGZJHIlEXg=="; }; }; "acorn-walk-6.1.0" = { @@ -1804,13 +1831,13 @@ let sha512 = "JVwXMr9nHYTUXsBFKUqhJwvlcYU/blreOEUkhNR2eXZIvwd+c+o5V4MgDPKWnMS/56awN3TRzIP+KoPn+roQtg=="; }; }; - "agentkeepalive-3.5.1" = { + "agentkeepalive-3.5.2" = { name = "agentkeepalive"; packageName = "agentkeepalive"; - version = "3.5.1"; + version = "3.5.2"; src = fetchurl { - url = "https://registry.npmjs.org/agentkeepalive/-/agentkeepalive-3.5.1.tgz"; - sha512 = "Cte/sTY9/XcygXjJ0q58v//SnEQ7ViWExKyJpLJlLqomDbQyMLh6Is4KuWJ/wmxzhiwkGRple7Gqv1zf6Syz5w=="; + url = "https://registry.npmjs.org/agentkeepalive/-/agentkeepalive-3.5.2.tgz"; + sha512 = "e0L/HNe6qkQ7H19kTlRRqUibEAwDK5AFk6y3PtMsuut2VAH6+Q4xZml1tNDJD7kSAyqmbG/K08K5WEJYtUrSlQ=="; }; }; "aggregate-error-1.0.0" = { @@ -1903,6 +1930,15 @@ let sha512 = "4Wyjt8+t6YszqaXnLDfMmG/8AlO5Zbcsy3ATHncCzjW/NoPzAId8AK6749Ybjmdt+kUY1gP60fCu46oDxPv/mg=="; }; }; + "ajv-6.5.5" = { + name = "ajv"; + packageName = "ajv"; + version = "6.5.5"; + src = fetchurl { + url = "https://registry.npmjs.org/ajv/-/ajv-6.5.5.tgz"; + sha512 = "7q7gtRQDJSyuEHjuVgHoUa2VuemFiCMrfQc9Tc08XTAc4Zj/5U1buQJ0HU6i7fKjXU09SVgSmxa4sLvuvS8Iyg=="; + }; + }; "ajv-keywords-1.5.1" = { name = "ajv-keywords"; packageName = "ajv-keywords"; @@ -1935,7 +1971,7 @@ let packageName = "aliasify"; version = "2.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/aliasify/-/aliasify-2.1.0.tgz"; + url = "http://registry.npmjs.org/aliasify/-/aliasify-2.1.0.tgz"; sha1 = "7c30825b9450b9e6185ba27533eaf6e2067d4b42"; }; }; @@ -2043,7 +2079,7 @@ let packageName = "ansi-escapes"; version = "1.4.0"; src = fetchurl { - url = "https://registry.npmjs.org/ansi-escapes/-/ansi-escapes-1.4.0.tgz"; + url = "http://registry.npmjs.org/ansi-escapes/-/ansi-escapes-1.4.0.tgz"; sha1 = "d3a8a83b319aa67793662b13e761c7911422306e"; }; }; @@ -2052,7 +2088,7 @@ let packageName = "ansi-escapes"; version = "3.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/ansi-escapes/-/ansi-escapes-3.1.0.tgz"; + url = "http://registry.npmjs.org/ansi-escapes/-/ansi-escapes-3.1.0.tgz"; sha512 = "UgAb8H9D41AQnu/PbWlCofQVcnV4Gs2bBJi9eZPxfU/hgglFh3SMDMENRIqdr7H6XFnXdoknctFByVsCOotTVw=="; }; }; @@ -2245,13 +2281,13 @@ let sha1 = "ee49736b639b4f108b6e9e626c6da99306b41692"; }; }; - "apollo-cache-1.1.17" = { + "apollo-cache-1.1.20" = { name = "apollo-cache"; packageName = "apollo-cache"; - version = "1.1.17"; + version = "1.1.20"; src = fetchurl { - url = "https://registry.npmjs.org/apollo-cache/-/apollo-cache-1.1.17.tgz"; - sha512 = "7sp24n2HZO4vXgTaKNomLyIfGxG4gDdDkBB0jkRzRi7HhnKmfwhiF/RCiKNbgLdrPX151INdls0KwIVliD0dHQ=="; + url = "https://registry.npmjs.org/apollo-cache/-/apollo-cache-1.1.20.tgz"; + sha512 = "+Du0/4kUSuf5PjPx0+pvgMGV12ezbHA8/hubYuqRQoy/4AWb4faa61CgJNI6cKz2mhDd9m94VTNKTX11NntwkQ=="; }; }; "apollo-cache-control-0.2.5" = { @@ -2263,22 +2299,22 @@ let sha512 = "xEDrUvo3U2mQKSzA8NzQmgeqK4ytwFnTGl2YKGKPfG0+r8fZdswKp6CDBue29KLO8KkSuqW/hntveWrAdK51FQ=="; }; }; - "apollo-cache-inmemory-1.3.5" = { + "apollo-cache-inmemory-1.3.9" = { name = "apollo-cache-inmemory"; packageName = "apollo-cache-inmemory"; - version = "1.3.5"; + version = "1.3.9"; src = fetchurl { - url = "https://registry.npmjs.org/apollo-cache-inmemory/-/apollo-cache-inmemory-1.3.5.tgz"; - sha512 = "CD4Dl9vcCp7N05KUqR3rNDj2WJ1DQNNfeyBUIo5T6XTiUhfBQp5x+CL7S+ezy5mPp+xo4TnwFzLFh/vy2LdDog=="; + url = "https://registry.npmjs.org/apollo-cache-inmemory/-/apollo-cache-inmemory-1.3.9.tgz"; + sha512 = "Q2k84p/OqIuMUyeWGc6XbVXXZu0erYOO+wTx9p+CnQUspnNvf7zmvFNgFnmudXzfuG1m1CSzePk6fC/M1ehOqQ=="; }; }; - "apollo-client-2.4.2" = { + "apollo-client-2.4.5" = { name = "apollo-client"; packageName = "apollo-client"; - version = "2.4.2"; + version = "2.4.5"; src = fetchurl { - url = "https://registry.npmjs.org/apollo-client/-/apollo-client-2.4.2.tgz"; - sha512 = "g1z23umaVSoKLj9xNl0aAnk2KBF4JeBi7MeKFc9CGTixH7TkqeQUQtxcjrC7j2h4KmDbuhOAHOFUGf8YshN+ag=="; + url = "https://registry.npmjs.org/apollo-client/-/apollo-client-2.4.5.tgz"; + sha512 = "nUm06EGa4TP/IY68OzmC3lTD32TqkjLOQdb69uYo+lHl8NnwebtrAw3qFtsQtTEz6ueBp/Z/HasNZng4jwafVQ=="; }; }; "apollo-codegen-0.19.1" = { @@ -2434,22 +2470,22 @@ let sha512 = "DZO7pfL5LATHeJdVFoTZ/N3HwA+IMf1YnIt5K+uMQW+/MrRgYOtTszUv5tYX2cUIqHYHcbdDaBQUuIXwSpaV2Q=="; }; }; - "apollo-upload-client-8.1.0" = { + "apollo-upload-client-9.1.0" = { name = "apollo-upload-client"; packageName = "apollo-upload-client"; - version = "8.1.0"; + version = "9.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/apollo-upload-client/-/apollo-upload-client-8.1.0.tgz"; - sha512 = "JEgStzhnwybj1ifE2nViLEl7NTM5+zS++fKbDL95PIpodg2AdYeeN7eEa7RXpYD14iC3FVcsfqgGMREv2+cSxw=="; + url = "https://registry.npmjs.org/apollo-upload-client/-/apollo-upload-client-9.1.0.tgz"; + sha512 = "ZN5gsbBjImEZTWWTUHpCEGDasnoBGbaODpznQ5EawyNHceuFYSNJbbft+ZZ841vZAcj9XZdKUKoaLBlMZ/r7nw=="; }; }; - "apollo-utilities-1.0.21" = { + "apollo-utilities-1.0.25" = { name = "apollo-utilities"; packageName = "apollo-utilities"; - version = "1.0.21"; + version = "1.0.25"; src = fetchurl { - url = "https://registry.npmjs.org/apollo-utilities/-/apollo-utilities-1.0.21.tgz"; - sha512 = "ZcxELlEl+sDCYBgEMdNXJAsZtRVm8wk4HIA58bMsqYfd1DSAJQEtZ93F0GZgYNAGy3QyaoBeZtbb0/01++G8JQ=="; + url = "https://registry.npmjs.org/apollo-utilities/-/apollo-utilities-1.0.25.tgz"; + sha512 = "AXvqkhni3Ir1ffm4SA1QzXn8k8I5BBl4PVKEyak734i4jFdp+xgfUyi2VCqF64TJlFTA/B73TRDUvO2D+tKtZg=="; }; }; "append-0.1.1" = { @@ -2479,15 +2515,6 @@ let sha1 = "d8220cf466081525efea50614f3de6514dfa58f1"; }; }; - "append-field-0.1.0" = { - name = "append-field"; - packageName = "append-field"; - version = "0.1.0"; - src = fetchurl { - url = "https://registry.npmjs.org/append-field/-/append-field-0.1.0.tgz"; - sha1 = "6ddc58fa083c7bc545d3c5995b2830cc2366d44a"; - }; - }; "append-field-1.0.0" = { name = "append-field"; packageName = "append-field"; @@ -3271,15 +3298,6 @@ let sha1 = "d16901d10ccec59516c197b9ccd8930689b813b4"; }; }; - "atomic-file-0.0.1" = { - name = "atomic-file"; - packageName = "atomic-file"; - version = "0.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/atomic-file/-/atomic-file-0.0.1.tgz"; - sha1 = "6c36658f6c4ece33fba3877731e7c25fc82999bb"; - }; - }; "atomic-file-1.1.5" = { name = "atomic-file"; packageName = "atomic-file"; @@ -3316,13 +3334,13 @@ let sha1 = "00f35b2d27ac91b1f0d3ef2084c98cf1d1f0adc3"; }; }; - "aws-sdk-2.334.0" = { + "aws-sdk-2.349.0" = { name = "aws-sdk"; packageName = "aws-sdk"; - version = "2.334.0"; + version = "2.349.0"; src = fetchurl { - url = "https://registry.npmjs.org/aws-sdk/-/aws-sdk-2.334.0.tgz"; - sha512 = "JiqtB2t/PklHCfo86HA6g6a8CXu5SDNa8XiaQ0rYyVBlzDR41p/s/yNlva3D1/QGiBTojl2fd9ZxBUxKa2Q9cg=="; + url = "https://registry.npmjs.org/aws-sdk/-/aws-sdk-2.349.0.tgz"; + sha512 = "yGYCvXOKpvLfbhh1Vo+/2q+Z5bRdPlFpXX3kHBGz4haI6ZoLfFGuztap4en83zim/wpG1ZrhVJjd9u+i9l1ZEA=="; }; }; "aws-sign-0.2.1" = { @@ -3438,7 +3456,7 @@ let packageName = "azure-arm-devtestlabs"; version = "2.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/azure-arm-devtestlabs/-/azure-arm-devtestlabs-2.1.1.tgz"; + url = "http://registry.npmjs.org/azure-arm-devtestlabs/-/azure-arm-devtestlabs-2.1.1.tgz"; sha512 = "S5dCYTMrqL+BJc699fIQtXwLFuv5m8jTDqPdXTFpn/CSkyBcOyJwuZH2zPExQjGNZTyjIR6GWi8oeg/IpYLBWw=="; }; }; @@ -3523,13 +3541,13 @@ let sha1 = "aa9a49fb9081a210f2f4cc6596ca4653b68306e6"; }; }; - "azure-arm-resource-7.0.0" = { + "azure-arm-resource-7.0.1" = { name = "azure-arm-resource"; packageName = "azure-arm-resource"; - version = "7.0.0"; + version = "7.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/azure-arm-resource/-/azure-arm-resource-7.0.0.tgz"; - sha512 = "LW1OmW49d5xQo/KDBK2BNfoFVOlP8Gq9yKqP2kz0e6RURl5UXhIfN65Y4GeJramuyGIOXeGPV+NrXrzl1k4d4g=="; + url = "https://registry.npmjs.org/azure-arm-resource/-/azure-arm-resource-7.0.1.tgz"; + sha512 = "vimPiR/xf6TFWNooIXZM6gRQV7Gdqs0y2wzNF+SNSMxPj3h8XEuSL/SyRZHNULY7sJseAx+0aGjWXbZxQo+kVw=="; }; }; "azure-arm-servermanagement-1.1.0" = { @@ -3559,13 +3577,13 @@ let sha1 = "b46cfcf7f1690e4739864dcdb5c8de322e82ec50"; }; }; - "azure-arm-website-5.3.0" = { + "azure-arm-website-5.5.0" = { name = "azure-arm-website"; packageName = "azure-arm-website"; - version = "5.3.0"; + version = "5.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/azure-arm-website/-/azure-arm-website-5.3.0.tgz"; - sha512 = "R2x44/SIGCuTBkRvnZuEjagIMAqcec38HnCl1AEO9NwpEh0HiD9eIa1XEM7j6wa7vHqyQdL7hNwYnCS0QRDkNQ=="; + url = "https://registry.npmjs.org/azure-arm-website/-/azure-arm-website-5.5.0.tgz"; + sha512 = "fppYG7UtrFNtuMPlyIpWItC7D6pcU4Nhu0UAs9uew42jubQG+PTNRSCadGMuOlANCBEUVtAGMk4jfUU2UGhKTw=="; }; }; "azure-asm-compute-0.18.0" = { @@ -3721,13 +3739,13 @@ let sha512 = "SkMg4vVrQ7Vd7/h8h3qZzURQysV4KJqUIy4pjs/XRjVbCduSePlJ3EOgAl9ed739RWkT906xIAU3tu2Pf5RKFQ=="; }; }; - "azure-storage-2.10.1" = { + "azure-storage-2.10.2" = { name = "azure-storage"; packageName = "azure-storage"; - version = "2.10.1"; + version = "2.10.2"; src = fetchurl { - url = "https://registry.npmjs.org/azure-storage/-/azure-storage-2.10.1.tgz"; - sha512 = "rnFo1uMIPtilusRCpK91tfY3P4Q7qRsDNwriXdp+OeTIGkGt0cTxL4mhqYfNPYPK+WBQmBdGWhOk+iROM05dcw=="; + url = "https://registry.npmjs.org/azure-storage/-/azure-storage-2.10.2.tgz"; + sha512 = "pOyGPya9+NDpAfm5YcFfklo57HfjDbYLXxs4lomPwvRxmb0Di/A+a+RkUmEFzaQ8S13CqxK40bRRB0sjj2ZQxA=="; }; }; "babel-code-frame-6.26.0" = { @@ -4108,15 +4126,6 @@ let sha1 = "45221ee429f7ee1e5035be3f51533f1cdfd29884"; }; }; - "basic-auth-2.0.0" = { - name = "basic-auth"; - packageName = "basic-auth"; - version = "2.0.0"; - src = fetchurl { - url = "https://registry.npmjs.org/basic-auth/-/basic-auth-2.0.0.tgz"; - sha1 = "015db3f353e02e56377755f962742e8981e7bbba"; - }; - }; "basic-auth-2.0.1" = { name = "basic-auth"; packageName = "basic-auth"; @@ -4527,7 +4536,7 @@ let packageName = "blob"; version = "0.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/blob/-/blob-0.0.2.tgz"; + url = "http://registry.npmjs.org/blob/-/blob-0.0.2.tgz"; sha1 = "b89562bd6994af95ba1e812155536333aa23cf24"; }; }; @@ -4536,10 +4545,19 @@ let packageName = "blob"; version = "0.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/blob/-/blob-0.0.4.tgz"; + url = "http://registry.npmjs.org/blob/-/blob-0.0.4.tgz"; sha1 = "bcf13052ca54463f30f9fc7e95b9a47630a94921"; }; }; + "blob-0.0.5" = { + name = "blob"; + packageName = "blob"; + version = "0.0.5"; + src = fetchurl { + url = "https://registry.npmjs.org/blob/-/blob-0.0.5.tgz"; + sha512 = "gaqbzQPqOoamawKg0LGVd7SzLgXS+JH61oWprSLH+P+abTczqJbhTR8CmJ2u9/bUYNmHTGJx/UEmn6doAvvuig=="; + }; + }; "blob-to-buffer-1.2.8" = { name = "blob-to-buffer"; packageName = "blob-to-buffer"; @@ -4585,6 +4603,15 @@ let sha1 = "61a26904d43d7f6b19dff7ed917dbc92452ad6d3"; }; }; + "bluebird-3.4.7" = { + name = "bluebird"; + packageName = "bluebird"; + version = "3.4.7"; + src = fetchurl { + url = "http://registry.npmjs.org/bluebird/-/bluebird-3.4.7.tgz"; + sha1 = "f72d760be09b7f76d08ed8fae98b289a8d05fab3"; + }; + }; "bluebird-3.5.2" = { name = "bluebird"; packageName = "bluebird"; @@ -4644,7 +4671,7 @@ let packageName = "body-parser"; version = "1.12.4"; src = fetchurl { - url = "https://registry.npmjs.org/body-parser/-/body-parser-1.12.4.tgz"; + url = "http://registry.npmjs.org/body-parser/-/body-parser-1.12.4.tgz"; sha1 = "090700c4ba28862a8520ef378395fdee5f61c229"; }; }; @@ -4653,19 +4680,10 @@ let packageName = "body-parser"; version = "1.13.3"; src = fetchurl { - url = "https://registry.npmjs.org/body-parser/-/body-parser-1.13.3.tgz"; + url = "http://registry.npmjs.org/body-parser/-/body-parser-1.13.3.tgz"; sha1 = "c08cf330c3358e151016a05746f13f029c97fa97"; }; }; - "body-parser-1.18.2" = { - name = "body-parser"; - packageName = "body-parser"; - version = "1.18.2"; - src = fetchurl { - url = "https://registry.npmjs.org/body-parser/-/body-parser-1.18.2.tgz"; - sha1 = "87678a19d84b47d859b83199bd59bce222b10454"; - }; - }; "body-parser-1.18.3" = { name = "body-parser"; packageName = "body-parser"; @@ -4698,7 +4716,7 @@ let packageName = "boom"; version = "0.3.8"; src = fetchurl { - url = "https://registry.npmjs.org/boom/-/boom-0.3.8.tgz"; + url = "http://registry.npmjs.org/boom/-/boom-0.3.8.tgz"; sha1 = "c8cdb041435912741628c044ecc732d1d17c09ea"; }; }; @@ -4707,7 +4725,7 @@ let packageName = "boom"; version = "2.10.1"; src = fetchurl { - url = "https://registry.npmjs.org/boom/-/boom-2.10.1.tgz"; + url = "http://registry.npmjs.org/boom/-/boom-2.10.1.tgz"; sha1 = "39c8918ceff5799f83f9492a848f625add0c766f"; }; }; @@ -5013,7 +5031,7 @@ let packageName = "browserify-transform-tools"; version = "1.7.0"; src = fetchurl { - url = "https://registry.npmjs.org/browserify-transform-tools/-/browserify-transform-tools-1.7.0.tgz"; + url = "http://registry.npmjs.org/browserify-transform-tools/-/browserify-transform-tools-1.7.0.tgz"; sha1 = "83e277221f63259bed2e7eb2a283a970a501f4c4"; }; }; @@ -5188,6 +5206,15 @@ let sha512 = "4/rOEg86jivtPTeOUUT61jJO1Ya1TrR/OkqCSZDyq84WJh3LuuiphBYJN+fm5xufIk4XAFcEwte/8WzC8If/1g=="; }; }; + "buffer-indexof-polyfill-1.0.1" = { + name = "buffer-indexof-polyfill"; + packageName = "buffer-indexof-polyfill"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/buffer-indexof-polyfill/-/buffer-indexof-polyfill-1.0.1.tgz"; + sha1 = "a9fb806ce8145d5428510ce72f278bb363a638bf"; + }; + }; "buffer-xor-1.0.3" = { name = "buffer-xor"; packageName = "buffer-xor"; @@ -5350,13 +5377,13 @@ let sha1 = "741c5216468eadc457b03410118ad77de8c1ddb1"; }; }; - "byte-size-4.0.3" = { + "byte-size-4.0.4" = { name = "byte-size"; packageName = "byte-size"; - version = "4.0.3"; + version = "4.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/byte-size/-/byte-size-4.0.3.tgz"; - sha512 = "JGC3EV2bCzJH/ENSh3afyJrH4vwxbHTuO5ljLoI5+2iJOcEpMgP8T782jH9b5qGxf2mSUIp1lfGnfKNrRHpvVg=="; + url = "https://registry.npmjs.org/byte-size/-/byte-size-4.0.4.tgz"; + sha512 = "82RPeneC6nqCdSwCX2hZUz3JPOvN5at/nTEw/CMf05Smu3Hrpo9Psb7LjN+k+XndNArG1EY8L4+BM3aTM4BCvw=="; }; }; "bytebuffer-3.5.5" = { @@ -5454,17 +5481,17 @@ let packageName = "cacache"; version = "10.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/cacache/-/cacache-10.0.4.tgz"; + url = "http://registry.npmjs.org/cacache/-/cacache-10.0.4.tgz"; sha512 = "Dph0MzuH+rTQzGPNT9fAnrPmMmjKfST6trxJeK7NQuHRaVw24VzPRWTmg9MpcwOVQZO0E1FBICUlFeNaKPIfHA=="; }; }; - "cacache-11.2.0" = { + "cacache-11.3.1" = { name = "cacache"; packageName = "cacache"; - version = "11.2.0"; + version = "11.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/cacache/-/cacache-11.2.0.tgz"; - sha512 = "IFWl6lfK6wSeYCHUXh+N1lY72UDrpyrYQJNIVQf48paDuWbv5RbAtJYf/4gUQFObTCHZwdZ5sI8Iw7nqwP6nlQ=="; + url = "https://registry.npmjs.org/cacache/-/cacache-11.3.1.tgz"; + sha512 = "2PEw4cRRDu+iQvBTTuttQifacYjLPhET+SYO/gEFMy8uhi+jlJREDAjSF5FWSdV/Aw5h18caHA7vMTw2c+wDzA=="; }; }; "cache-base-1.0.1" = { @@ -5634,7 +5661,7 @@ let packageName = "camelcase-keys"; version = "2.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/camelcase-keys/-/camelcase-keys-2.1.0.tgz"; + url = "http://registry.npmjs.org/camelcase-keys/-/camelcase-keys-2.1.0.tgz"; sha1 = "308beeaffdf28119051efa1d932213c91b8f92e7"; }; }; @@ -5940,7 +5967,7 @@ let packageName = "cheerio"; version = "0.17.0"; src = fetchurl { - url = "https://registry.npmjs.org/cheerio/-/cheerio-0.17.0.tgz"; + url = "http://registry.npmjs.org/cheerio/-/cheerio-0.17.0.tgz"; sha1 = "fa5ae42cc60121133d296d0b46d983215f7268ea"; }; }; @@ -5949,7 +5976,7 @@ let packageName = "cheerio"; version = "0.20.0"; src = fetchurl { - url = "https://registry.npmjs.org/cheerio/-/cheerio-0.20.0.tgz"; + url = "http://registry.npmjs.org/cheerio/-/cheerio-0.20.0.tgz"; sha1 = "5c710f2bab95653272842ba01c6ea61b3545ec35"; }; }; @@ -5958,7 +5985,7 @@ let packageName = "cheerio"; version = "0.22.0"; src = fetchurl { - url = "https://registry.npmjs.org/cheerio/-/cheerio-0.22.0.tgz"; + url = "http://registry.npmjs.org/cheerio/-/cheerio-0.22.0.tgz"; sha1 = "a9baa860a3f9b595a6b81b1a86873121ed3a269e"; }; }; @@ -6133,13 +6160,13 @@ let sha512 = "UZK3NBx2Mca+b5LsG7bY183pHWt5Y1xts4P3Pz7ENTwGVnJOUWbRb3ocjvX7hx9tq/yTAdclXm9sZ38gNuem4A=="; }; }; - "circular-json-0.5.7" = { + "circular-json-0.5.9" = { name = "circular-json"; packageName = "circular-json"; - version = "0.5.7"; + version = "0.5.9"; src = fetchurl { - url = "https://registry.npmjs.org/circular-json/-/circular-json-0.5.7.tgz"; - sha512 = "/pXoV1JA847qRKPrHbBK6YIBGFF8GOP4wzSgUOA7q0ew0vAv0iJswP+2/nZQ9uzA3Azi7eTrg9L2yzXc/7ZMIA=="; + url = "https://registry.npmjs.org/circular-json/-/circular-json-0.5.9.tgz"; + sha512 = "4ivwqHpIFJZBuhN3g/pEcdbnGUywkBblloGbkglyloVjjR3uT6tieI89MVOfbP2tHX5sgb01FuLgAOzebNlJNQ=="; }; }; "clarinet-0.11.0" = { @@ -6210,7 +6237,7 @@ let packageName = "cli-color"; version = "0.1.7"; src = fetchurl { - url = "https://registry.npmjs.org/cli-color/-/cli-color-0.1.7.tgz"; + url = "http://registry.npmjs.org/cli-color/-/cli-color-0.1.7.tgz"; sha1 = "adc3200fa471cc211b0da7f566b71e98b9d67347"; }; }; @@ -6826,15 +6853,6 @@ let sha1 = "0137e657baa5a7541c57ac37ac5fc07d73b4dc1f"; }; }; - "combined-stream-1.0.6" = { - name = "combined-stream"; - packageName = "combined-stream"; - version = "1.0.6"; - src = fetchurl { - url = "http://registry.npmjs.org/combined-stream/-/combined-stream-1.0.6.tgz"; - sha1 = "723e7df6e801ac5613113a7e445a9b69cb632818"; - }; - }; "combined-stream-1.0.7" = { name = "combined-stream"; packageName = "combined-stream"; @@ -7561,53 +7579,53 @@ let packageName = "conventional-changelog-angular"; version = "1.6.6"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog-angular/-/conventional-changelog-angular-1.6.6.tgz"; + url = "http://registry.npmjs.org/conventional-changelog-angular/-/conventional-changelog-angular-1.6.6.tgz"; sha512 = "suQnFSqCxRwyBxY68pYTsFkG0taIdinHLNEAX5ivtw8bCRnIgnpvcHmlR/yjUyZIrNPYAoXlY1WiEKWgSE4BNg=="; }; }; - "conventional-changelog-angular-5.0.1" = { + "conventional-changelog-angular-5.0.2" = { name = "conventional-changelog-angular"; packageName = "conventional-changelog-angular"; - version = "5.0.1"; + version = "5.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog-angular/-/conventional-changelog-angular-5.0.1.tgz"; - sha512 = "q4ylJ68fWZDdrFC9z4zKcf97HW6hp7Mo2YlqD4owfXhecFKy/PJCU/1oVFF4TqochchChqmZ0Vb0e0g8/MKNlA=="; + url = "https://registry.npmjs.org/conventional-changelog-angular/-/conventional-changelog-angular-5.0.2.tgz"; + sha512 = "yx7m7lVrXmt4nKWQgWZqxSALEiAKZhOAcbxdUaU9575mB0CzXVbgrgpfSnSP7OqWDUTYGD0YVJ0MSRdyOPgAwA=="; }; }; - "conventional-changelog-core-3.1.0" = { + "conventional-changelog-core-3.1.5" = { name = "conventional-changelog-core"; packageName = "conventional-changelog-core"; - version = "3.1.0"; + version = "3.1.5"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog-core/-/conventional-changelog-core-3.1.0.tgz"; - 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"conventional-changelog-writer-4.0.0" = { + "conventional-changelog-writer-4.0.2" = { name = "conventional-changelog-writer"; packageName = "conventional-changelog-writer"; - version = "4.0.0"; + version = "4.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-changelog-writer/-/conventional-changelog-writer-4.0.0.tgz"; - sha512 = "hMZPe0AQ6Bi05epeK/7hz80xxk59nPA5z/b63TOHq2wigM0/akreOc8N4Jam5b9nFgKWX1e9PdPv2ewgW6bcfg=="; + url = "https://registry.npmjs.org/conventional-changelog-writer/-/conventional-changelog-writer-4.0.2.tgz"; + sha512 = "d8/FQY/fix2xXEBUhOo8u3DCbyEw3UOQgYHxLsPDw+wHUDma/GQGAGsGtoH876WyNs32fViHmTOUrgRKVLvBug=="; }; }; - "conventional-commits-filter-2.0.0" = { + "conventional-commits-filter-2.0.1" = { name = "conventional-commits-filter"; packageName = "conventional-commits-filter"; - version = "2.0.0"; + version = "2.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-commits-filter/-/conventional-commits-filter-2.0.0.tgz"; - sha512 = "Cfl0j1/NquB/TMVx7Wrmyq7uRM+/rPQbtVVGwzfkhZ6/yH6fcMmP0Q/9044TBZPTNdGzm46vXFXL14wbET0/Mg=="; + url = "https://registry.npmjs.org/conventional-commits-filter/-/conventional-commits-filter-2.0.1.tgz"; + sha512 = "92OU8pz/977udhBjgPEbg3sbYzIxMDFTlQT97w7KdhR9igNqdJvy8smmedAAgn4tPiqseFloKkrVfbXCVd+E7A=="; }; }; "conventional-commits-parser-2.1.7" = { @@ -7615,26 +7633,26 @@ let packageName = "conventional-commits-parser"; version = "2.1.7"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-commits-parser/-/conventional-commits-parser-2.1.7.tgz"; + url = "http://registry.npmjs.org/conventional-commits-parser/-/conventional-commits-parser-2.1.7.tgz"; sha512 = "BoMaddIEJ6B4QVMSDu9IkVImlGOSGA1I2BQyOZHeLQ6qVOJLcLKn97+fL6dGbzWEiqDzfH4OkcveULmeq2MHFQ=="; }; }; - "conventional-commits-parser-3.0.0" = { + "conventional-commits-parser-3.0.1" = { name = "conventional-commits-parser"; packageName = "conventional-commits-parser"; - version = "3.0.0"; + version = "3.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-commits-parser/-/conventional-commits-parser-3.0.0.tgz"; - sha512 = "GWh71U26BLWgMykCp+VghZ4s64wVbtseECcKQ/PvcPZR2cUnz+FUc2J9KjxNl7/ZbCxST8R03c9fc+Vi0umS9Q=="; + url = "https://registry.npmjs.org/conventional-commits-parser/-/conventional-commits-parser-3.0.1.tgz"; + sha512 = "P6U5UOvDeidUJ8ebHVDIoXzI7gMlQ1OF/id6oUvp8cnZvOXMt1n8nYl74Ey9YMn0uVQtxmCtjPQawpsssBWtGg=="; }; }; - "conventional-recommended-bump-4.0.1" = { + "conventional-recommended-bump-4.0.4" = { name = "conventional-recommended-bump"; packageName = "conventional-recommended-bump"; - version = "4.0.1"; + version = "4.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/conventional-recommended-bump/-/conventional-recommended-bump-4.0.1.tgz"; - sha512 = "9waJvW01TUs4HQJ3khwGSSlTlKsY+5u7OrxHL+oWEoGNvaNO/0qL6qqnhS3J0Fq9fNKA9bmlf5cOXjCQoW+I4Q=="; + url = "https://registry.npmjs.org/conventional-recommended-bump/-/conventional-recommended-bump-4.0.4.tgz"; + sha512 = "9mY5Yoblq+ZMqJpBzgS+RpSq+SUfP2miOR3H/NR9drGf08WCrY9B6HAGJZEm6+ThsVP917VHAahSOjM6k1vhPg=="; }; }; "convert-source-map-1.1.3" = { @@ -7799,13 +7817,13 @@ let sha512 = "Mw+adcfzPxcPeI+0WlvRrr/3lGVO0bD75SxX6811cxSh1Wbxx7xZBGK1eVtDf6si8rg2lhnUjsVLMFMfbRIuwA=="; }; }; - "cookies-0.7.2" = { + "cookies-0.7.3" = { name = "cookies"; packageName = "cookies"; - version = "0.7.2"; + version = "0.7.3"; src = fetchurl { - url = "https://registry.npmjs.org/cookies/-/cookies-0.7.2.tgz"; - sha512 = "J2JjH9T3PUNKPHknprxgCrCaZshIfxW2j49gq1E1CP5Micj1LppWAR2y9EHSQAzEiX84zOsScWNwUZ0b/ChlMw=="; + url = "https://registry.npmjs.org/cookies/-/cookies-0.7.3.tgz"; + sha512 = "+gixgxYSgQLTaTIilDHAdlNPZDENDQernEMiIcZpYYP14zgHsCt4Ce1FEjFtcp6GefhozebB6orvhAAWx/IS0A=="; }; }; "copy-concurrently-1.0.5" = { @@ -7912,7 +7930,7 @@ let packageName = "core-js"; version = "2.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/core-js/-/core-js-2.3.0.tgz"; + url = "http://registry.npmjs.org/core-js/-/core-js-2.3.0.tgz"; sha1 = "fab83fbb0b2d8dc85fa636c4b9d34c75420c6d65"; }; }; @@ -7943,6 +7961,15 @@ let sha1 = "2bd381f2eb201020105cd50ea59da63090694686"; }; }; + "cors-2.8.5" = { + name = "cors"; + packageName = "cors"; + version = "2.8.5"; + src = fetchurl { + url = "https://registry.npmjs.org/cors/-/cors-2.8.5.tgz"; + sha512 = "KIHbLJqu73RGr/hnbrO9uBeixNGuvSQjul/jdFvS/KFSIH1hWVd1ng7zOHx+YrEfInLG7q4n6GHQ9cDtxv/P6g=="; + }; + }; "corser-2.0.1" = { name = "corser"; packageName = "corser"; @@ -8105,13 +8132,13 @@ let sha512 = "KMd0KuvwVUg1grlRd5skG9ZkSbBYDDkAjDUMLnvxdRn0rL7ph3IwoOk7I8u1yLX4HYjGiLVlWYO55YWNNPjJFA=="; }; }; - "cron-1.4.1" = { + "cron-1.5.0" = { name = "cron"; packageName = "cron"; - version = "1.4.1"; + version = "1.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/cron/-/cron-1.4.1.tgz"; - sha512 = "HlglwQUNh6bhgfoDR6aEzyHN2T4bc0XhxJxkNPp+Ry7lK7Noby94pHcngYf634+MtxplwZm8okFgNe+R9PGDjg=="; + url = "https://registry.npmjs.org/cron/-/cron-1.5.0.tgz"; + sha512 = "j7zMFLrcSta53xqOvETUt8ge+PM14GtF47gEGJJeVlM6qP24/eWHSgtiWiEiKBR2sHS8xZaBQZq4D7vFXg8dcQ=="; }; }; "cross-fetch-2.2.2" = { @@ -8164,7 +8191,7 @@ let packageName = "cross-spawn-async"; version = "2.2.5"; src = fetchurl { - url = "https://registry.npmjs.org/cross-spawn-async/-/cross-spawn-async-2.2.5.tgz"; + url = "http://registry.npmjs.org/cross-spawn-async/-/cross-spawn-async-2.2.5.tgz"; sha1 = "845ff0c0834a3ded9d160daca6d390906bb288cc"; }; }; @@ -8209,7 +8236,7 @@ let packageName = "cryptiles"; version = "0.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/cryptiles/-/cryptiles-0.1.3.tgz"; + url = "http://registry.npmjs.org/cryptiles/-/cryptiles-0.1.3.tgz"; sha1 = "1a556734f06d24ba34862ae9cb9e709a3afbff1c"; }; }; @@ -8218,17 +8245,17 @@ let packageName = "cryptiles"; version = "2.0.5"; src = fetchurl { - url = "https://registry.npmjs.org/cryptiles/-/cryptiles-2.0.5.tgz"; + url = "http://registry.npmjs.org/cryptiles/-/cryptiles-2.0.5.tgz"; sha1 = "3bdfecdc608147c1c67202fa291e7dca59eaa3b8"; }; }; - "cryptiles-3.1.2" = { + "cryptiles-3.1.4" = { name = "cryptiles"; packageName = "cryptiles"; - version = "3.1.2"; + version = "3.1.4"; src = fetchurl { - url = "https://registry.npmjs.org/cryptiles/-/cryptiles-3.1.2.tgz"; - sha1 = "a89fbb220f5ce25ec56e8c4aa8a4fd7b5b0d29fe"; + url = "https://registry.npmjs.org/cryptiles/-/cryptiles-3.1.4.tgz"; + sha512 = "8I1sgZHfVwcSOY6mSGpVU3lw/GSIZvusg8dD2+OGehCJpOhQRLNcH0qb9upQnOH4XhgxxFJSg6E2kx95deb1Tw=="; }; }; "crypto-0.0.3" = { @@ -8308,26 +8335,26 @@ let packageName = "css-select"; version = "1.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/css-select/-/css-select-1.2.0.tgz"; + url = "http://registry.npmjs.org/css-select/-/css-select-1.2.0.tgz"; sha1 = "2b3a110539c5355f1cd8d314623e870b121ec858"; }; }; - "css-select-2.0.0" = { + "css-select-2.0.2" = { name = "css-select"; packageName = "css-select"; - version = "2.0.0"; + version = "2.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/css-select/-/css-select-2.0.0.tgz"; - sha512 = "MGhoq1S9EyPgZIGnts8Yz5WwUOyHmPMdlqeifsYs/xFX7AAm3hY0RJe1dqVlXtYPI66Nsk39R/sa5/ree6L2qg=="; + url = "https://registry.npmjs.org/css-select/-/css-select-2.0.2.tgz"; + sha512 = "dSpYaDVoWaELjvZ3mS6IKZM/y2PMPa/XYoEfYNZePL4U/XgyxZNroHEHReDx/d+VgXh9VbCTtFqLkFbmeqeaRQ=="; }; }; - "css-select-base-adapter-0.1.0" = { + "css-select-base-adapter-0.1.1" = { name = "css-select-base-adapter"; packageName = "css-select-base-adapter"; - version = "0.1.0"; + version = "0.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/css-select-base-adapter/-/css-select-base-adapter-0.1.0.tgz"; - sha1 = "0102b3d14630df86c3eb9fa9f5456270106cf990"; + url = "https://registry.npmjs.org/css-select-base-adapter/-/css-select-base-adapter-0.1.1.tgz"; + sha512 = "jQVeeRG70QI08vSTwf1jHxp74JoZsr2XSgETae8/xC8ovSnL2WF87GTLO86Sbwdt2lK4Umg4HnnwMO4YF3Ce7w=="; }; }; "css-stringify-1.0.5" = { @@ -8366,13 +8393,13 @@ let sha1 = "83834230cc9f74c457de59eebd1543feeb83b7ec"; }; }; - "css-what-2.1.0" = { + "css-what-2.1.2" = { name = "css-what"; packageName = "css-what"; - version = "2.1.0"; + version = "2.1.2"; src = fetchurl { - url = "https://registry.npmjs.org/css-what/-/css-what-2.1.0.tgz"; - sha1 = "9467d032c38cfaefb9f2d79501253062f87fa1bd"; + url = "https://registry.npmjs.org/css-what/-/css-what-2.1.2.tgz"; + sha512 = "wan8dMWQ0GUeF7DGEPVjhHemVW/vy6xUYmFzRY8RYqgA0JtXC9rJmbScBjqSu6dg9q0lwPQy6ZAmJVr3PPTvqQ=="; }; }; "cssauron-1.4.0" = { @@ -8456,6 +8483,15 @@ let sha1 = "d1cfd8743c2f849a0abb2fd544db56695d19a490"; }; }; + "csv-parser-1.12.1" = { + name = "csv-parser"; + packageName = "csv-parser"; + version = "1.12.1"; + src = fetchurl { + url = "http://registry.npmjs.org/csv-parser/-/csv-parser-1.12.1.tgz"; + sha512 = "r45M92nLnGP246ot0Yo5RvbiiMF5Bw/OTIdWJ3OQ4Vbv4hpOeoXVIPxdSmUw+fPJlQOseY+iigJyLSfPMIrddQ=="; + }; + }; "csv-stringify-0.0.8" = { name = "csv-stringify"; packageName = "csv-stringify"; @@ -8470,7 +8506,7 @@ let packageName = "ctype"; version = "0.5.2"; src = fetchurl { - url = "https://registry.npmjs.org/ctype/-/ctype-0.5.2.tgz"; + url = "http://registry.npmjs.org/ctype/-/ctype-0.5.2.tgz"; sha1 = "fe8091d468a373a0b0c9ff8bbfb3425c00973a1d"; }; }; @@ -8479,7 +8515,7 @@ let packageName = "ctype"; version = "0.5.3"; src = fetchurl { - url = "https://registry.npmjs.org/ctype/-/ctype-0.5.3.tgz"; + url = "http://registry.npmjs.org/ctype/-/ctype-0.5.3.tgz"; sha1 = "82c18c2461f74114ef16c135224ad0b9144ca12f"; }; }; @@ -8578,7 +8614,7 @@ let packageName = "d"; version = "1.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/d/-/d-1.0.0.tgz"; + url = "http://registry.npmjs.org/d/-/d-1.0.0.tgz"; sha1 = "754bb5bfe55451da69a58b94d45f4c5b0462d58f"; }; }; @@ -9221,6 +9257,15 @@ let sha512 = "ajbXqRPMXRlcdyt0TuWqknOJkp1JgQjGB7xOl2V+ebol7/U11E9h3/nCZAtN1M7djmAJEIhypCUc1tIWxdQAuQ=="; }; }; + "deferred-leveldown-4.0.2" = { + name = "deferred-leveldown"; + packageName = "deferred-leveldown"; + version = "4.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/deferred-leveldown/-/deferred-leveldown-4.0.2.tgz"; + sha512 = "5fMC8ek8alH16QiV0lTCis610D1Zt1+LA4MS4d63JgS32lrCjTFDUFz2ao09/j2I4Bqb5jL4FZYwu7Jz0XO1ww=="; + }; + }; "define-properties-1.1.3" = { name = "define-properties"; packageName = "define-properties"; @@ -9352,19 +9397,10 @@ let packageName = "depd"; version = "1.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/depd/-/depd-1.0.1.tgz"; + url = "http://registry.npmjs.org/depd/-/depd-1.0.1.tgz"; sha1 = "80aec64c9d6d97e65cc2a9caa93c0aa6abf73aaa"; }; }; - "depd-1.1.1" = { - name = "depd"; - packageName = "depd"; - version = "1.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/depd/-/depd-1.1.1.tgz"; - sha1 = "5783b4e1c459f06fa5ca27f991f3d06e7a310359"; - }; - }; "depd-1.1.2" = { name = "depd"; packageName = "depd"; @@ -9635,6 +9671,15 @@ let sha1 = "4d5afc5187edba67ec6ab0e55f6422a0e2cb7338"; }; }; + "discontinuous-range-1.0.0" = { + name = "discontinuous-range"; + packageName = "discontinuous-range"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/discontinuous-range/-/discontinuous-range-1.0.0.tgz"; + sha1 = "e38331f0844bba49b9a9cb71c771585aab1bc65a"; + }; + }; "discovery-channel-5.5.1" = { name = "discovery-channel"; packageName = "discovery-channel"; @@ -9874,7 +9919,7 @@ let packageName = "domelementtype"; version = "1.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/domelementtype/-/domelementtype-1.1.3.tgz"; + url = "http://registry.npmjs.org/domelementtype/-/domelementtype-1.1.3.tgz"; sha1 = "bd28773e2642881aec51544924299c5cd822185b"; }; }; @@ -9883,7 +9928,7 @@ let packageName = "domelementtype"; version = "1.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/domelementtype/-/domelementtype-1.3.0.tgz"; + url = "http://registry.npmjs.org/domelementtype/-/domelementtype-1.3.0.tgz"; sha1 = "b17aed82e8ab59e52dd9c19b1756e0fc187204c2"; }; }; @@ -10379,7 +10424,7 @@ let packageName = "enabled"; version = "1.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/enabled/-/enabled-1.0.2.tgz"; + url = "http://registry.npmjs.org/enabled/-/enabled-1.0.2.tgz"; sha1 = "965f6513d2c2d1c5f4652b64a2e3396467fc2f93"; }; }; @@ -10410,6 +10455,15 @@ let sha512 = "AlSE+ugBIpLL0i9if2SlnOZ4oWj/XvBb8tw2Ie/pFB73vdYs5O/6plRyqIgjbZbz8onaL20AAuMP87LWbP56IQ=="; }; }; + "encoding-down-5.0.4" = { + name = "encoding-down"; + packageName = "encoding-down"; + version = "5.0.4"; + src = fetchurl { + url = "https://registry.npmjs.org/encoding-down/-/encoding-down-5.0.4.tgz"; + sha512 = "8CIZLDcSKxgzT+zX8ZVfgNbu8Md2wq/iqa1Y7zyVR18QBEAc0Nmzuvj/N5ykSKpfGzjM8qxbaFntLPwnVoUhZw=="; + }; + }; "end-of-stream-0.1.5" = { name = "end-of-stream"; packageName = "end-of-stream"; @@ -10460,7 +10514,7 @@ let packageName = "engine.io"; version = "1.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/engine.io/-/engine.io-1.3.1.tgz"; + url = "http://registry.npmjs.org/engine.io/-/engine.io-1.3.1.tgz"; sha1 = "2d968308fffae5d17f5209b6775246e90d8a705e"; }; }; @@ -10473,13 +10527,13 @@ let sha512 = "j1DWIcktw4hRwrv6nWx++5nFH2X64x16MAG2P0Lmi5Dvdfi3I+Jhc7JKJIdAmDJa+5aZ/imHV7dWRPy2Cqjh3A=="; }; }; - "engine.io-3.2.0" = { + "engine.io-3.2.1" = { name = "engine.io"; packageName = "engine.io"; - version = "3.2.0"; + version = "3.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/engine.io/-/engine.io-3.2.0.tgz"; - sha512 = "mRbgmAtQ4GAlKwuPnnAvXXwdPhEx+jkc0OBCLrXuD/CRvwNK3AxRSnqK4FSqmAMRRHryVJP8TopOvmEaA64fKw=="; + url = "https://registry.npmjs.org/engine.io/-/engine.io-3.2.1.tgz"; + sha512 = "+VlKzHzMhaU+GsCIg4AoXF1UdDFjHHwMmMKqMJNDNLlUlejz58FCy4LBqB2YVJskHGYl06BatYWKP2TVdVXE5w=="; }; }; "engine.io-client-1.3.1" = { @@ -10514,7 +10568,7 @@ let packageName = "engine.io-parser"; version = "1.0.6"; src = fetchurl { - url = "https://registry.npmjs.org/engine.io-parser/-/engine.io-parser-1.0.6.tgz"; + url = "http://registry.npmjs.org/engine.io-parser/-/engine.io-parser-1.0.6.tgz"; sha1 = "d38813143a411cb3b914132ab05bf99e6f7a248e"; }; }; @@ -10523,17 +10577,17 @@ let packageName = "engine.io-parser"; version = "1.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/engine.io-parser/-/engine.io-parser-1.3.2.tgz"; + url = "http://registry.npmjs.org/engine.io-parser/-/engine.io-parser-1.3.2.tgz"; sha1 = "937b079f0007d0893ec56d46cb220b8cb435220a"; }; }; - "engine.io-parser-2.1.2" = { + "engine.io-parser-2.1.3" = { name = "engine.io-parser"; packageName = "engine.io-parser"; - version = "2.1.2"; + version = "2.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/engine.io-parser/-/engine.io-parser-2.1.2.tgz"; - sha512 = "dInLFzr80RijZ1rGpx1+56/uFoH7/7InhH3kZt+Ms6hT8tNx3NGW/WNSA/f8As1WkOfkuyb3tnRyuXGxusclMw=="; + url = "https://registry.npmjs.org/engine.io-parser/-/engine.io-parser-2.1.3.tgz"; + sha512 = "6HXPre2O4Houl7c4g7Ic/XzPnHBvaEmN90vtRO9uLmwtRqQmTOw0QMevL1TOfL2Cpu1VzsaTmMotQgMdkzGkVA=="; }; }; "enhanced-resolve-2.3.0" = { @@ -10577,17 +10631,17 @@ let packageName = "entities"; version = "1.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/entities/-/entities-1.0.0.tgz"; + url = "http://registry.npmjs.org/entities/-/entities-1.0.0.tgz"; sha1 = "b2987aa3821347fcde642b24fdfc9e4fb712bf26"; }; }; - "entities-1.1.1" = { + "entities-1.1.2" = { name = "entities"; packageName = "entities"; - version = "1.1.1"; + version = "1.1.2"; src = fetchurl { - url = "https://registry.npmjs.org/entities/-/entities-1.1.1.tgz"; - sha1 = "6e5c2d0a5621b5dadaecef80b90edfb5cd7772f0"; + url = "https://registry.npmjs.org/entities/-/entities-1.1.2.tgz"; + sha512 = "f2LZMYl1Fzu7YSBKg+RoROelpOaNrcGmE9AZubeDfrCEia483oW4MI4VyFd5VNHIgQ/7qm1I0wUHK1eJnn2y2w=="; }; }; "env-paths-1.0.0" = { @@ -10626,13 +10680,13 @@ let sha512 = "rXbzXWvnQxy+TcqZlARbWVQwgGVVouVJgFZhLVN5htjLxl1thstrP2ZGi0pXC309AbK7gVOPU+ulz/tmpCI7iw=="; }; }; - "epidemic-broadcast-trees-6.3.4" = { + "epidemic-broadcast-trees-6.3.5" = { name = "epidemic-broadcast-trees"; packageName = "epidemic-broadcast-trees"; - version = "6.3.4"; + version = "6.3.5"; src = fetchurl { - url = "https://registry.npmjs.org/epidemic-broadcast-trees/-/epidemic-broadcast-trees-6.3.4.tgz"; - sha512 = "ucs3AI3ebPCDFGw8B0SUBwzcY2WqKrbJeqYeeX9KF+XvsO7GFEe0L+1hXPfJcEScfGPByXJNACkYwUFnNaOueQ=="; + url = "https://registry.npmjs.org/epidemic-broadcast-trees/-/epidemic-broadcast-trees-6.3.5.tgz"; + sha512 = "FYCOslXU7OBkz8A9FXsykcpgby3WKcRdLTCr1LivLLSU2nzaO/x86jBGNFEZkezZPx9/Z5fDVX8SGQyXLz8WZQ=="; }; }; "err-code-1.1.2" = { @@ -10820,7 +10874,7 @@ let packageName = "es6-promisify"; version = "5.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/es6-promisify/-/es6-promisify-5.0.0.tgz"; + url = "http://registry.npmjs.org/es6-promisify/-/es6-promisify-5.0.0.tgz"; sha1 = "5109d62f3e56ea967c4b63505aef08291c8a5203"; }; }; @@ -10838,7 +10892,7 @@ let packageName = "es6-shim"; version = "0.21.1"; src = fetchurl { - url = "https://registry.npmjs.org/es6-shim/-/es6-shim-0.21.1.tgz"; + url = "http://registry.npmjs.org/es6-shim/-/es6-shim-0.21.1.tgz"; sha1 = "6621bce72e1ac80a6e1f002abd4e789f12489fd2"; }; }; @@ -10959,13 +11013,13 @@ let sha512 = "D5nG2rErquLUstgUaxJlWB5+gu+U/3VDY0fk/Iuq8y9CUFy/7Y6oF4N2cR1tV8knzQvciIbfqfohd359xTLIKQ=="; }; }; - "eslint-5.7.0" = { + "eslint-5.8.0" = { name = "eslint"; packageName = "eslint"; - version = "5.7.0"; + version = "5.8.0"; src = fetchurl { - url = "https://registry.npmjs.org/eslint/-/eslint-5.7.0.tgz"; - sha512 = "zYCeFQahsxffGl87U2aJ7DPyH8CbWgxBC213Y8+TCanhUTf2gEvfq3EKpHmEcozTLyPmGe9LZdMAwC/CpJBM5A=="; + url = "https://registry.npmjs.org/eslint/-/eslint-5.8.0.tgz"; + sha512 = "Zok6Bru3y2JprqTNm14mgQ15YQu/SMDkWdnmHfFg770DIUlmMFd/gqqzCHekxzjHZJxXv3tmTpH0C1icaYJsRQ=="; }; }; "eslint-plugin-no-unsafe-innerhtml-1.0.16" = { @@ -11018,7 +11072,7 @@ let packageName = "espree"; version = "3.5.4"; src = fetchurl { - url = "https://registry.npmjs.org/espree/-/espree-3.5.4.tgz"; + url = "http://registry.npmjs.org/espree/-/espree-3.5.4.tgz"; sha512 = "yAcIQxtmMiB/jL32dzEp2enBeidsB7xWPLNiw3IIkpVds1P+h7qF9YwJq1yUNzp2OKXgAprs4F61ih66UsoD1A=="; }; }; @@ -11031,6 +11085,15 @@ let sha512 = "kapdTCt1bjmspxStVKX6huolXVV5ZfyZguY1lcfhVVZstce3bqxH9mcLzNn3/mlgW6wQ732+0fuG9v7h0ZQoKg=="; }; }; + "espree-4.1.0" = { + name = "espree"; + packageName = "espree"; + version = "4.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/espree/-/espree-4.1.0.tgz"; + sha512 = "I5BycZW6FCVIub93TeVY1s7vjhP9CY6cXCznIRfiig7nRviKZYdRnj/sHEWC6A7WE9RDWOFq9+7OsWSYz8qv2w=="; + }; + }; "esprima-1.0.4" = { name = "esprima"; packageName = "esprima"; @@ -11373,6 +11436,15 @@ let sha1 = "d8d76bbc1b55217ed190fd6dd49d3c774ecfc8da"; }; }; + "execa-0.9.0" = { + name = "execa"; + packageName = "execa"; + version = "0.9.0"; + src = fetchurl { + url = "https://registry.npmjs.org/execa/-/execa-0.9.0.tgz"; + sha512 = "BbUMBiX4hqiHZUA5+JujIjNb6TyAlp2D5KLheMjMluwOuzcnylDL4AxZYLLn1n2AGB49eSWwyKvvEQoRpnAtmA=="; + }; + }; "execa-1.0.0" = { name = "execa"; packageName = "execa"; @@ -11544,15 +11616,6 @@ let sha1 = "8df3d5a9ac848585f00a0777601823faecd3b148"; }; }; - "express-4.16.3" = { - name = "express"; - packageName = "express"; - version = "4.16.3"; - src = fetchurl { - url = "http://registry.npmjs.org/express/-/express-4.16.3.tgz"; - sha1 = "6af8a502350db3246ecc4becf6b5a34d22f7ed53"; - }; - }; "express-4.16.4" = { name = "express"; packageName = "express"; @@ -11562,13 +11625,13 @@ let sha512 = "j12Uuyb4FMrd/qQAm6uCHAkPtO8FDTRJZBDd5D2KOL2eLaz1yUNdUB/NOIyq0iU4q4cFarsUCrnFDPBcnksuOg=="; }; }; - "express-5.0.0-alpha.6" = { + "express-5.0.0-alpha.7" = { name = "express"; packageName = "express"; - version = "5.0.0-alpha.6"; + version = "5.0.0-alpha.7"; src = fetchurl { - url = "https://registry.npmjs.org/express/-/express-5.0.0-alpha.6.tgz"; - sha1 = "85dc44d7e90d4809041407f388f239b5bd2f681e"; + url = "https://registry.npmjs.org/express/-/express-5.0.0-alpha.7.tgz"; + sha512 = "3FW+yXzYCViXf6Ty9TN9IKLW+rC8qok3ktS4hS1FILAEnMnfnDpQ+23rZVvWC0Ul1alYpJXx7xSBSBp073970g=="; }; }; "express-handlebars-3.0.0" = { @@ -11769,13 +11832,13 @@ let sha512 = "Nmb6QXkELsuBr24CJSkilo6UHHgbekK5UiZgfE6UHD3Eb27YC6oD+bhcT+tJ6cl8dmsgdQxnWlcry8ksBIBLpw=="; }; }; - "extract-files-3.1.0" = { + "extract-files-4.1.0" = { name = "extract-files"; packageName = "extract-files"; - version = "3.1.0"; + version = "4.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/extract-files/-/extract-files-3.1.0.tgz"; - sha512 = "urkJPM4N88CMy1AfDw+Avudon6fToTsaG5j5VN0aybn88udv1yrERFCweV78NaZg7DOFsQULkFgvP64vNQFNMQ=="; + url = "https://registry.npmjs.org/extract-files/-/extract-files-4.1.0.tgz"; + sha512 = "2gjdb3dVzr1ie9+K8pupPTnsNkK4qmzbTFOIxghiWoh6nCTajGCGC72ZNYX0nBWy5IOq1FXfRVgvkkLqqE4sdw=="; }; }; "extract-opts-3.3.1" = { @@ -11891,7 +11954,7 @@ let packageName = "fast-deep-equal"; version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/fast-deep-equal/-/fast-deep-equal-1.1.0.tgz"; + url = "http://registry.npmjs.org/fast-deep-equal/-/fast-deep-equal-1.1.0.tgz"; sha1 = "c053477817c86b51daa853c81e059b733d023614"; }; }; @@ -12021,15 +12084,6 @@ let sha1 = "f0efe18c4f56e4f40afc7e06c719fd5ee6188f38"; }; }; - "fclone-1.0.11" = { - name = "fclone"; - packageName = "fclone"; - version = "1.0.11"; - src = fetchurl { - url = "https://registry.npmjs.org/fclone/-/fclone-1.0.11.tgz"; - sha1 = "10e85da38bfea7fc599341c296ee1d77266ee640"; - }; - }; "fd-read-stream-1.1.0" = { name = "fd-read-stream"; packageName = "fd-read-stream"; @@ -12062,7 +12116,7 @@ let packageName = "fecha"; version = "2.3.3"; src = fetchurl { - url = "https://registry.npmjs.org/fecha/-/fecha-2.3.3.tgz"; + url = "http://registry.npmjs.org/fecha/-/fecha-2.3.3.tgz"; sha512 = "lUGBnIamTAwk4znq5BcqsDaxSmZ9nDVJaij6NvRt/Tg4R69gERA+otPKbS86ROw9nxVMw2/mp1fnaiWqbs6Sdg=="; }; }; @@ -12080,7 +12134,7 @@ let packageName = "fibers"; version = "1.0.15"; src = fetchurl { - url = "https://registry.npmjs.org/fibers/-/fibers-1.0.15.tgz"; + url = "http://registry.npmjs.org/fibers/-/fibers-1.0.15.tgz"; sha1 = "22f039c8f18b856190fbbe4decf056154c1eae9c"; }; }; @@ -12273,15 +12327,6 @@ let sha1 = "2c400d8d4530935bc232549c5fa385ec07de6fcd"; }; }; - "finalhandler-1.0.6" = { - name = "finalhandler"; - packageName = "finalhandler"; - version = "1.0.6"; - src = fetchurl { - url = "https://registry.npmjs.org/finalhandler/-/finalhandler-1.0.6.tgz"; - sha1 = "007aea33d1a4d3e42017f624848ad58d212f814f"; - }; - }; "finalhandler-1.1.0" = { name = "finalhandler"; packageName = "finalhandler"; @@ -12462,6 +12507,15 @@ let sha1 = "b88673c42009f8821fac2926e99720acee924fae"; }; }; + "fkill-5.3.0" = { + name = "fkill"; + packageName = "fkill"; + version = "5.3.0"; + src = fetchurl { + url = "https://registry.npmjs.org/fkill/-/fkill-5.3.0.tgz"; + sha512 = "AHe4x/k9xHlSNPRya0FOCd42qa6ggmW4gtdy6mR0R1vdWtNq9zMd8nmMR5LB7fTNOA1f1nOU+uqaQHP7NMWmVA=="; + }; + }; "flagged-respawn-1.0.0" = { name = "flagged-respawn"; packageName = "flagged-respawn"; @@ -12561,22 +12615,13 @@ let sha1 = "36ce06abe2e0e01c44dd69f2a165305a2320649b"; }; }; - "flumecodec-0.0.1" = { - name = "flumecodec"; - packageName = "flumecodec"; - version = "0.0.1"; - src = fetchurl { - url = "https://registry.npmjs.org/flumecodec/-/flumecodec-0.0.1.tgz"; - sha1 = "ae049a714386bb83e342657a82924b70364a90d6"; - }; - }; - "flumedb-0.5.1" = { + "flumedb-1.0.1" = { name = "flumedb"; packageName = "flumedb"; - version = "0.5.1"; + version = "1.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/flumedb/-/flumedb-0.5.1.tgz"; - sha512 = "WB/q5YYEvVB2ozp7xhp3ur5NfX03HZywx6EEV6AlKjd1PodZdHVspz3NpakV++mVB89CRoH2nq+WdY33ntbfQw=="; + url = "https://registry.npmjs.org/flumedb/-/flumedb-1.0.1.tgz"; + sha512 = "mT0v0dY9EkWRGwDtTfavYNv2Z6nrMNlVZCNJD7qxjfPJymfv8kNYB4UvDdBHleHegvzjufjnE73IkRG5DgMjww=="; }; }; "flumelog-offset-3.3.2" = { @@ -12755,7 +12800,7 @@ let packageName = "form-data"; version = "0.0.10"; src = fetchurl { - url = "https://registry.npmjs.org/form-data/-/form-data-0.0.10.tgz"; + url = "http://registry.npmjs.org/form-data/-/form-data-0.0.10.tgz"; sha1 = "db345a5378d86aeeb1ed5d553b869ac192d2f5ed"; }; }; @@ -12764,7 +12809,7 @@ let packageName = "form-data"; version = "0.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/form-data/-/form-data-0.1.3.tgz"; + url = "http://registry.npmjs.org/form-data/-/form-data-0.1.3.tgz"; sha1 = "4ee4346e6eb5362e8344a02075bd8dbd8c7373ea"; }; }; @@ -12773,7 +12818,7 @@ let packageName = "form-data"; version = "1.0.0-rc3"; src = fetchurl { - url = "https://registry.npmjs.org/form-data/-/form-data-1.0.0-rc3.tgz"; + url = "http://registry.npmjs.org/form-data/-/form-data-1.0.0-rc3.tgz"; sha1 = "d35bc62e7fbc2937ae78f948aaa0d38d90607577"; }; }; @@ -12782,7 +12827,7 @@ let packageName = "form-data"; version = "1.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/form-data/-/form-data-1.0.1.tgz"; + url = "http://registry.npmjs.org/form-data/-/form-data-1.0.1.tgz"; sha1 = "ae315db9a4907fa065502304a66d7733475ee37c"; }; }; @@ -12795,13 +12840,13 @@ let sha1 = "33c183acf193276ecaa98143a69e94bfee1750d1"; }; }; - "form-data-2.3.2" = { + "form-data-2.3.3" = { name = "form-data"; packageName = "form-data"; - version = "2.3.2"; + version = "2.3.3"; src = fetchurl { - url = "https://registry.npmjs.org/form-data/-/form-data-2.3.2.tgz"; - sha1 = "4970498be604c20c005d4f5c23aecd21d6b49099"; + url = "https://registry.npmjs.org/form-data/-/form-data-2.3.3.tgz"; + sha512 = "1lLKB2Mu3aGP1Q/2eCOx0fNbRMe7XdwktwOruhfqqd0rIJWwN4Dh+E3hrPSlDCXnSR7UtZ1N38rVXm+6+MEhJQ=="; }; }; "format-util-1.0.3" = { @@ -13290,6 +13335,15 @@ let sha1 = "336a98f81510f9ae0af2a494e17468a116a9dc04"; }; }; + "generate-function-1.1.0" = { + name = "generate-function"; + packageName = "generate-function"; + version = "1.1.0"; + src = fetchurl { + url = "http://registry.npmjs.org/generate-function/-/generate-function-1.1.0.tgz"; + sha1 = "54c21b080192b16d9877779c5bb81666e772365f"; + }; + }; "generate-function-2.3.1" = { name = "generate-function"; packageName = "generate-function"; @@ -13317,13 +13371,13 @@ let sha1 = "8b465c1a7588ea9dd2bb133bda0bb66bfef8a63e"; }; }; - "genfun-4.0.1" = { + "genfun-5.0.0" = { name = "genfun"; packageName = "genfun"; - version = "4.0.1"; + version = "5.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/genfun/-/genfun-4.0.1.tgz"; - sha1 = "ed10041f2e4a7f1b0a38466d17a5c3e27df1dfc1"; + url = "https://registry.npmjs.org/genfun/-/genfun-5.0.0.tgz"; + sha512 = "KGDOARWVga7+rnB3z9Sd2Letx515owfk0hSxHGuqjANb1M+x2bGZGqHLiozPsYMdM2OubeMni/Hpwmjq6qIUhA=="; }; }; "get-assigned-identifiers-1.2.0" = { @@ -13529,7 +13583,7 @@ let packageName = "git-raw-commits"; version = "1.3.6"; src = fetchurl { - url = "https://registry.npmjs.org/git-raw-commits/-/git-raw-commits-1.3.6.tgz"; + url = "http://registry.npmjs.org/git-raw-commits/-/git-raw-commits-1.3.6.tgz"; sha512 = "svsK26tQ8vEKnMshTDatSIQSMDdz8CxIIqKsvPqbtV23Etmw6VNaFAitu8zwZ0VrOne7FztwPyRLxK7/DIUTQg=="; }; }; @@ -13569,13 +13623,13 @@ let sha1 = "a0c2e3dd392abcf6b76962e27fc75fb3223449ce"; }; }; - "git-semver-tags-2.0.0" = { + "git-semver-tags-2.0.2" = { name = "git-semver-tags"; packageName = "git-semver-tags"; - version = "2.0.0"; + version = "2.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/git-semver-tags/-/git-semver-tags-2.0.0.tgz"; - sha512 = "lSgFc3zQTul31nFje2Q8XdNcTOI6B4I3mJRPCgFzHQQLfxfqdWTYzdtCaynkK5Xmb2wQlSJoKolhXJ1VhKROnQ=="; + url = "https://registry.npmjs.org/git-semver-tags/-/git-semver-tags-2.0.2.tgz"; + sha512 = "34lMF7Yo1xEmsK2EkbArdoU79umpvm0MfzaDkSNYSJqtM5QLAVTPWgpiXSVI5o/O9EvZPSrP4Zvnec/CqhSd5w=="; }; }; "git-ssb-web-2.8.0" = { @@ -13971,7 +14025,7 @@ let packageName = "graceful-fs"; version = "1.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/graceful-fs/-/graceful-fs-1.2.3.tgz"; + url = "http://registry.npmjs.org/graceful-fs/-/graceful-fs-1.2.3.tgz"; sha1 = "15a4806a57547cb2d2dbf27f42e89a8c3451b364"; }; }; @@ -13980,7 +14034,7 @@ let packageName = "graceful-fs"; version = "2.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/graceful-fs/-/graceful-fs-2.0.3.tgz"; + url = "http://registry.npmjs.org/graceful-fs/-/graceful-fs-2.0.3.tgz"; sha1 = "7cd2cdb228a4a3f36e95efa6cc142de7d1a136d0"; }; }; @@ -13989,7 +14043,7 @@ let packageName = "graceful-fs"; version = "3.0.11"; src = fetchurl { - url = "https://registry.npmjs.org/graceful-fs/-/graceful-fs-3.0.11.tgz"; + url = "http://registry.npmjs.org/graceful-fs/-/graceful-fs-3.0.11.tgz"; sha1 = "7613c778a1afea62f25c630a086d7f3acbbdd818"; }; }; @@ -13998,10 +14052,19 @@ let packageName = "graceful-fs"; version = "4.1.11"; src = fetchurl { - url = "https://registry.npmjs.org/graceful-fs/-/graceful-fs-4.1.11.tgz"; + url = "http://registry.npmjs.org/graceful-fs/-/graceful-fs-4.1.11.tgz"; sha1 = "0e8bdfe4d1ddb8854d64e04ea7c00e2a026e5658"; }; }; + "graceful-fs-4.1.15" = { + name = "graceful-fs"; + packageName = "graceful-fs"; + version = "4.1.15"; + src = fetchurl { + url = "https://registry.npmjs.org/graceful-fs/-/graceful-fs-4.1.15.tgz"; + sha512 = "6uHUhOPEBgQ24HM+r6b/QwWfZq+yiFcipKFrOFiBEnWdy5sdzYoi+pJeQaPI5qOLRFqWmAXUPQNsielzdLoecA=="; + }; + }; "graceful-readlink-1.0.1" = { name = "graceful-readlink"; packageName = "graceful-readlink"; @@ -14056,13 +14119,22 @@ let sha512 = "QZ5BL8ZO/B20VA8APauGBg3GyEgZ19eduvpLWoq5x7gMmWnHoy8rlQWPLmWgFvo1yNgjSEFMesmS4R6pPr7xog=="; }; }; - "graphql-anywhere-4.1.19" = { + "graphql-14.0.2" = { + name = "graphql"; + packageName = "graphql"; + version = "14.0.2"; + src = fetchurl { + url = "https://registry.npmjs.org/graphql/-/graphql-14.0.2.tgz"; + sha512 = "gUC4YYsaiSJT1h40krG3J+USGlwhzNTXSb4IOZljn9ag5Tj+RkoXrWp+Kh7WyE3t1NCfab5kzCuxBIvOMERMXw=="; + }; + }; + "graphql-anywhere-4.1.22" = { name = "graphql-anywhere"; packageName = "graphql-anywhere"; - version = "4.1.19"; + version = "4.1.22"; src = fetchurl { - url = "https://registry.npmjs.org/graphql-anywhere/-/graphql-anywhere-4.1.19.tgz"; - sha512 = "mQlvbECzYPBcgBC9JsdM4v+DSvNmcIP+8Vwr+ij3gktbaLSE0Iza30mztuz40Jlf7ooMs+0emBZucNjLzqz7tA=="; + url = "https://registry.npmjs.org/graphql-anywhere/-/graphql-anywhere-4.1.22.tgz"; + sha512 = "qm2/1cKM8nfotxDhm4J0r1znVlK0Yge/yEKt26EVVBgpIhvxjXYFALCGbr7cvfDlvzal1iSPpaYa+8YTtjsxQA=="; }; }; "graphql-cli-prepare-1.4.19" = { @@ -14083,49 +14155,31 @@ let sha512 = "BOtbEOn/fD13jT0peCy3Fzp1DSTsA/1AcZp266AQ5Sk3wFndKCEa/H7donbu5UriOw1V/N1WDirYPnr7rd8E7Q=="; }; }; - "graphql-config-2.0.0" = { + "graphql-config-2.2.1" = { name = "graphql-config"; packageName = "graphql-config"; - version = "2.0.0"; - src = fetchurl { - url = "http://registry.npmjs.org/graphql-config/-/graphql-config-2.0.0.tgz"; - sha512 = "//hZmROEk79zzPlH6SVTQeXd8NVV65rquz1zxZeO6oEuX5KNnii8+oznLu7d897EfJ+NShTZtsY9FMmxxkWmJw=="; - }; - }; - "graphql-config-2.0.1" = { - name = "graphql-config"; - packageName = "graphql-config"; - version = "2.0.1"; + version = "2.2.1"; src = fetchurl { - url = "http://registry.npmjs.org/graphql-config/-/graphql-config-2.0.1.tgz"; - sha512 = "eb4FzlODifHE/Q+91QptAmkGw39wL5ToinJ2556UUsGt2drPc4tzifL+HSnHSaxiIbH8EUhc/Fa6+neinF04qA=="; + url = "https://registry.npmjs.org/graphql-config/-/graphql-config-2.2.1.tgz"; + sha512 = "U8+1IAhw9m6WkZRRcyj8ZarK96R6lQBQ0an4lp76Ps9FyhOXENC5YQOxOFGm5CxPrX2rD0g3Je4zG5xdNJjwzQ=="; }; }; - "graphql-config-extension-graphcool-1.0.8" = { + "graphql-config-extension-graphcool-1.0.11" = { name = "graphql-config-extension-graphcool"; packageName = "graphql-config-extension-graphcool"; - version = "1.0.8"; - src = fetchurl { - url = "http://registry.npmjs.org/graphql-config-extension-graphcool/-/graphql-config-extension-graphcool-1.0.8.tgz"; - sha512 = "eMvL/RAo88EHo8SmP40Zcsrx7nrLTE82G4ZochsHYoEvP+QMo0XA+Vq9lxYeRTJEtGMFD4imjHXGHWh4B0srQw=="; - }; - }; - "graphql-config-extension-openapi-1.0.6" = { - name = "graphql-config-extension-openapi"; - packageName = "graphql-config-extension-openapi"; - version = "1.0.6"; + version = "1.0.11"; src = fetchurl { - url = "https://registry.npmjs.org/graphql-config-extension-openapi/-/graphql-config-extension-openapi-1.0.6.tgz"; - sha512 = "Do6tHyQyxaPhaZdJ+ZCpYbVhczlqNqMVuO46aG/YkMuRQPoj/FRmeH9BFXniFkz60TZyRpLTQNel2sllMekRLQ=="; + url = "https://registry.npmjs.org/graphql-config-extension-graphcool/-/graphql-config-extension-graphcool-1.0.11.tgz"; + sha512 = "uNhyMqj30M4KLkD/gGEEr6cPuVX/jtm0C9O5Bj9V2jFhN5IdHXWJx+fC/p/xxh82iOuR8uibKNCXzwA7R6F6IA=="; }; }; - "graphql-config-extension-prisma-0.2.1" = { + "graphql-config-extension-prisma-0.2.5" = { name = "graphql-config-extension-prisma"; packageName = "graphql-config-extension-prisma"; - version = "0.2.1"; + version = "0.2.5"; src = fetchurl { - url = "https://registry.npmjs.org/graphql-config-extension-prisma/-/graphql-config-extension-prisma-0.2.1.tgz"; - sha512 = "OIqa5hjX3bqHR5x2uPE5ssdaI6DEr/P/+utAaqdM6ZEAi8vgupye4AT5AOyDzwK5iDmbJAkShgwQlHiAm4Srvg=="; + url = "https://registry.npmjs.org/graphql-config-extension-prisma/-/graphql-config-extension-prisma-0.2.5.tgz"; + sha512 = "7Qh3TzZS3hwZpJbTNfTHXBM6UbzV7DMik9Mc95Rz76yTAs7Wr83xBFsH4Ap1NWlqBgANfO3cLLI4YomDJmO5SA=="; }; }; "graphql-extensions-0.2.1" = { @@ -14146,22 +14200,31 @@ let sha512 = "G/+I08Qp6/QGTb9qapknCm3yPHV0ZL7wbaalWFpxsfR8ZhZoTBe//LsbsCKlbALQpcMegchpJhpTSKiJjhaVqQ=="; }; }; - "graphql-playground-html-1.5.5" = { + "graphql-import-0.7.1" = { + name = "graphql-import"; + packageName = "graphql-import"; + version = "0.7.1"; + src = fetchurl { + url = "https://registry.npmjs.org/graphql-import/-/graphql-import-0.7.1.tgz"; + sha512 = "YpwpaPjRUVlw2SN3OPljpWbVRWAhMAyfSba5U47qGMOSsPLi2gYeJtngGpymjm9nk57RFWEpjqwh4+dpYuFAPw=="; + }; + }; + "graphql-playground-html-1.6.4" = { name = "graphql-playground-html"; packageName = "graphql-playground-html"; - version = "1.5.5"; + version = "1.6.4"; src = fetchurl { - url = "https://registry.npmjs.org/graphql-playground-html/-/graphql-playground-html-1.5.5.tgz"; - sha512 = "PzSywpEKcjbDUkV6e3ivEixvAuUJGyYmBUvuittzySe/RgwHRo0xKLD7HouUCTbpFfWMw8kRKhAUVtt7Ys97uw=="; + url = "https://registry.npmjs.org/graphql-playground-html/-/graphql-playground-html-1.6.4.tgz"; + sha512 = "mnpAVYSR3TesYsJ5OLJVJMA0muTCw4npsCI1cKMtW35lbA6KljZkLkz3ZWXhEIYPnHKIeUHEtbn1ZGkEXtAxLg=="; }; }; - "graphql-playground-middleware-express-1.6.2" = { + "graphql-playground-middleware-express-1.7.6" = { name = "graphql-playground-middleware-express"; packageName = "graphql-playground-middleware-express"; - version = "1.6.2"; + version = "1.7.6"; src = fetchurl { - url = "https://registry.npmjs.org/graphql-playground-middleware-express/-/graphql-playground-middleware-express-1.6.2.tgz"; - sha512 = "BHaEZe2J2lQ1TX2W73a6PI2zVjB9Nb0J9pFdbG1L7ugYdbait/elDrsNMxLCsDHVOGJF009VlYszrk7Cq7FiTg=="; + url = "https://registry.npmjs.org/graphql-playground-middleware-express/-/graphql-playground-middleware-express-1.7.6.tgz"; + sha512 = "fICPxYGIdhCxtFlwCnP3uZ2uRWeQ9wj7OkcWUiHNwaFma2TbRD5nNKaPA2u21YWha9xv26qIDxxcdW27F/lcbQ=="; }; }; "graphql-request-1.8.2" = { @@ -14236,15 +14299,6 @@ let sha1 = "d2c177e2f1b17d87f81072cd05311c0754baa420"; }; }; - "graphreduce-3.0.4" = { - name = "graphreduce"; - packageName = "graphreduce"; - version = "3.0.4"; - src = fetchurl { - url = "https://registry.npmjs.org/graphreduce/-/graphreduce-3.0.4.tgz"; - sha1 = "bf442d0a878e83901e5ef3e652d23ffb5b831ed7"; - }; - }; "gray-matter-2.1.1" = { name = "gray-matter"; packageName = "gray-matter"; @@ -14754,7 +14808,7 @@ let packageName = "hawk"; version = "0.10.2"; src = fetchurl { - url = "https://registry.npmjs.org/hawk/-/hawk-0.10.2.tgz"; + url = "http://registry.npmjs.org/hawk/-/hawk-0.10.2.tgz"; sha1 = "9b361dee95a931640e6d504e05609a8fc3ac45d2"; }; }; @@ -14763,7 +14817,7 @@ let packageName = "hawk"; version = "3.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/hawk/-/hawk-3.1.3.tgz"; + url = "http://registry.npmjs.org/hawk/-/hawk-3.1.3.tgz"; sha1 = "078444bd7c1640b0fe540d2c9b73d59678e8e1c4"; }; }; @@ -14848,13 +14902,13 @@ let sha1 = "b8a9c5493212a9392f0222b649c9611497ebfb88"; }; }; - "highlight.js-9.13.0" = { + "highlight.js-9.13.1" = { name = "highlight.js"; packageName = "highlight.js"; - version = "9.13.0"; + version = "9.13.1"; src = fetchurl { - url = "https://registry.npmjs.org/highlight.js/-/highlight.js-9.13.0.tgz"; - sha512 = "2B90kcNnErqRTmzdZw6IPLEC9CdsiIMhj+r8L3LJKRCgtEJ+LY5yzWuQCVnADTI0wwocQinFzaaL/JjTQNqI/g=="; + url = "https://registry.npmjs.org/highlight.js/-/highlight.js-9.13.1.tgz"; + sha512 = "Sc28JNQNDzaH6PORtRLMvif9RSn1mYuOoX3omVjnb0+HbpPygU2ALBI0R/wsiqCb4/fcp07Gdo8g+fhtFrQl6A=="; }; }; "hiredis-0.4.1" = { @@ -14880,7 +14934,7 @@ let packageName = "hoek"; version = "0.7.6"; src = fetchurl { - url = "https://registry.npmjs.org/hoek/-/hoek-0.7.6.tgz"; + url = "http://registry.npmjs.org/hoek/-/hoek-0.7.6.tgz"; sha1 = "60fbd904557541cd2b8795abf308a1b3770e155a"; }; }; @@ -14889,7 +14943,7 @@ let packageName = "hoek"; version = "2.16.3"; src = fetchurl { - url = "https://registry.npmjs.org/hoek/-/hoek-2.16.3.tgz"; + url = "http://registry.npmjs.org/hoek/-/hoek-2.16.3.tgz"; sha1 = "20bb7403d3cea398e91dc4710a8ff1b8274a25ed"; }; }; @@ -14898,7 +14952,7 @@ let packageName = "hoek"; version = "4.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/hoek/-/hoek-4.2.1.tgz"; + url = "http://registry.npmjs.org/hoek/-/hoek-4.2.1.tgz"; sha512 = "QLg82fGkfnJ/4iy1xZ81/9SIJiq1NGFUMGs6ParyjBZr6jW2Ufj/snDqTHixNlHdPNwN2RLVD0Pi3igeK9+JfA=="; }; }; @@ -14911,6 +14965,15 @@ let sha512 = "Alr4ZQgoMlnere5FZJsIyfIjORBqZll5POhDsF4q64dPuJR6rNxXdDxtHSQq8OXRurhmx+PWYEE8bXRROY8h0w=="; }; }; + "hoek-6.0.1" = { + name = "hoek"; + packageName = "hoek"; + version = "6.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/hoek/-/hoek-6.0.1.tgz"; + sha512 = "3PvUwBerLNVJiIVQdpkWF9F/M0ekgb2NPJWOhsE28RXSQPsY42YSnaJ8d1kZjcAz58TZ/Fk9Tw64xJsENFlJNw=="; + }; + }; "hogan.js-3.0.2" = { name = "hogan.js"; packageName = "hogan.js"; @@ -14988,16 +15051,25 @@ let packageName = "htmlescape"; version = "1.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/htmlescape/-/htmlescape-1.1.1.tgz"; + url = "http://registry.npmjs.org/htmlescape/-/htmlescape-1.1.1.tgz"; sha1 = "3a03edc2214bca3b66424a3e7959349509cb0351"; }; }; + "htmlparser2-3.10.0" = { + name = "htmlparser2"; + packageName = "htmlparser2"; + version = "3.10.0"; + src = fetchurl { + url = "https://registry.npmjs.org/htmlparser2/-/htmlparser2-3.10.0.tgz"; + sha512 = "J1nEUGv+MkXS0weHNWVKJJ+UrLfePxRWpN3C9bEi9fLxL2+ggW94DQvgYVXsaT30PGwYRIZKNZXuyMhp3Di4bQ=="; + }; + }; "htmlparser2-3.7.3" = { name = "htmlparser2"; packageName = "htmlparser2"; version = "3.7.3"; src = fetchurl { - url = "https://registry.npmjs.org/htmlparser2/-/htmlparser2-3.7.3.tgz"; + url = "http://registry.npmjs.org/htmlparser2/-/htmlparser2-3.7.3.tgz"; sha1 = "6a64c77637c08c6f30ec2a8157a53333be7cb05e"; }; }; @@ -15006,19 +15078,10 @@ let packageName = "htmlparser2"; version = "3.8.3"; src = fetchurl { - url = "https://registry.npmjs.org/htmlparser2/-/htmlparser2-3.8.3.tgz"; + url = "http://registry.npmjs.org/htmlparser2/-/htmlparser2-3.8.3.tgz"; sha1 = "996c28b191516a8be86501a7d79757e5c70c1068"; }; }; - "htmlparser2-3.9.2" = { - name = "htmlparser2"; - packageName = "htmlparser2"; - version = "3.9.2"; - src = fetchurl { - url = "https://registry.npmjs.org/htmlparser2/-/htmlparser2-3.9.2.tgz"; - sha1 = "1bdf87acca0f3f9e53fa4fcceb0f4b4cbb00b338"; - }; - }; "http-auth-2.0.7" = { name = "http-auth"; packageName = "http-auth"; @@ -15064,15 +15127,6 @@ let sha1 = "197e22cdebd4198585e8694ef6786197b91ed942"; }; }; - "http-errors-1.6.2" = { - name = "http-errors"; - packageName = "http-errors"; - version = "1.6.2"; - src = fetchurl { - url = "https://registry.npmjs.org/http-errors/-/http-errors-1.6.2.tgz"; - sha1 = "0a002cc85707192a7e7946ceedc11155f60ec736"; - }; - }; "http-errors-1.6.3" = { name = "http-errors"; packageName = "http-errors"; @@ -15109,13 +15163,13 @@ let sha1 = "29691b6fc58f4f7e81a3605dca82682b068e4430"; }; }; - "http-parser-js-0.4.13" = { + "http-parser-js-0.5.0" = { name = "http-parser-js"; packageName = "http-parser-js"; - version = "0.4.13"; + version = "0.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/http-parser-js/-/http-parser-js-0.4.13.tgz"; - sha1 = "3bd6d6fde6e3172c9334c3b33b6c193d80fe1137"; + url = "https://registry.npmjs.org/http-parser-js/-/http-parser-js-0.5.0.tgz"; + sha512 = "cZdEF7r4gfRIq7ezX9J0T+kQmJNOub71dWbgAXVHDct80TKP4MCETtZQ31xyv38UwgzkWPYF/Xc0ge55dW9Z9w=="; }; }; "http-proxy-1.0.2" = { @@ -15123,7 +15177,7 @@ let packageName = "http-proxy"; version = "1.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/http-proxy/-/http-proxy-1.0.2.tgz"; + url = "http://registry.npmjs.org/http-proxy/-/http-proxy-1.0.2.tgz"; sha1 = "08060ff2edb2189e57aa3a152d3ac63ed1af7254"; }; }; @@ -15258,7 +15312,7 @@ let packageName = "humanize-plus"; version = "1.8.2"; src = fetchurl { - url = "https://registry.npmjs.org/humanize-plus/-/humanize-plus-1.8.2.tgz"; + url = "http://registry.npmjs.org/humanize-plus/-/humanize-plus-1.8.2.tgz"; sha1 = "a65b34459ad6367adbb3707a82a3c9f916167030"; }; }; @@ -15379,15 +15433,6 @@ let sha1 = "fe265a218ac6a57cfe854927e9d04c19825eddeb"; }; }; - "iconv-lite-0.4.19" = { - name = "iconv-lite"; - packageName = "iconv-lite"; - version = "0.4.19"; - src = fetchurl { - url = "https://registry.npmjs.org/iconv-lite/-/iconv-lite-0.4.19.tgz"; - sha512 = "oTZqweIP51xaGPI4uPa56/Pri/480R+mo7SeU+YETByQNhDG55ycFyNLIgta9vXhILrxXDmF7ZGhqZIcuN0gJQ=="; - }; - }; "iconv-lite-0.4.23" = { name = "iconv-lite"; packageName = "iconv-lite"; @@ -15460,13 +15505,13 @@ let sha512 = "cyFDKrqc/YdcWFniJhzI42+AzS+gNwmUzOSFcRCQYwySuBBBy/KjuxWLZ/FHEH6Moq1NizMOBWyTcv8O4OZIMg=="; }; }; - "ignore-5.0.2" = { + "ignore-5.0.4" = { name = "ignore"; packageName = "ignore"; - version = "5.0.2"; + version = "5.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/ignore/-/ignore-5.0.2.tgz"; - sha512 = "ilxkgh36cTqJxlipxQdCOxkbQae5dIeCwo5fSw6pBDW8m8GiMTnadClKST2+aATqjs9BTHsi0IqOsTp0jiihAw=="; + url = "https://registry.npmjs.org/ignore/-/ignore-5.0.4.tgz"; + sha512 = "WLsTMEhsQuXpCiG173+f3aymI43SXa+fB1rSfbzyP4GkPP+ZFVuO0/3sFUGNBtifisPeDcl/uD/Y2NxZ7xFq4g=="; }; }; "ignore-by-default-1.0.1" = { @@ -15532,13 +15577,13 @@ let sha512 = "5s6NiCGbtWc+OQA60jrre54w12U7tynIyUNjO5LJjNA5lWwvCv6640roq8Wk/wIuaqnd4Pgtp453OyJ7hbONkQ=="; }; }; - "immutable-tuple-0.4.8" = { + "immutable-tuple-0.4.9" = { name = "immutable-tuple"; packageName = "immutable-tuple"; - version = "0.4.8"; + version = "0.4.9"; src = fetchurl { - url = "https://registry.npmjs.org/immutable-tuple/-/immutable-tuple-0.4.8.tgz"; - sha512 = "1m29EVSrF+LJJAyVo1v12NsIalVKjyi4HNQVQDBx+LNCIuRXnfeMCHuLao5CyN1m3Sn0T63U5JEkmPArPCipQA=="; + url = "https://registry.npmjs.org/immutable-tuple/-/immutable-tuple-0.4.9.tgz"; + sha512 = "LWbJPZnidF8eczu7XmcnLBsumuyRBkpwIRPCZxlojouhBo5jEBO4toj6n7hMy6IxHU/c+MqDSWkvaTpPlMQcyA=="; }; }; "import-global-0.1.0" = { @@ -15892,6 +15937,15 @@ let sha1 = "332650e10854d8c0ac58c192bdc27a8bf7e7a30c"; }; }; + "into-stream-2.0.1" = { + name = "into-stream"; + packageName = "into-stream"; + version = "2.0.1"; + src = fetchurl { + url = "http://registry.npmjs.org/into-stream/-/into-stream-2.0.1.tgz"; + sha1 = "db9b003694453eae091d8a5c84cc11507b781d31"; + }; + }; "into-stream-3.1.0" = { name = "into-stream"; packageName = "into-stream"; @@ -15928,15 +15982,6 @@ let sha512 = "wPVv/y/QQ/Uiirj/vh3oP+1Ww+AWehmi1g5fFWGPF6IpCBCDVrhgHRMvrLfdYcwDh3QJbGXDW4JAuzxElLSqKA=="; }; }; - "ip-0.3.3" = { - name = "ip"; - packageName = "ip"; - version = "0.3.3"; - src = fetchurl { - url = "https://registry.npmjs.org/ip/-/ip-0.3.3.tgz"; - sha1 = "8ee8309e92f0b040d287f72efaca1a21702d3fb4"; - }; - }; "ip-1.1.5" = { name = "ip"; packageName = "ip"; @@ -15973,15 +16018,6 @@ let sha1 = "5fa78cf301b825c78abc3042d812723049ea23c7"; }; }; - "ipaddr.js-1.4.0" = { - name = "ipaddr.js"; - packageName = "ipaddr.js"; - version = "1.4.0"; - src = fetchurl { - url = "https://registry.npmjs.org/ipaddr.js/-/ipaddr.js-1.4.0.tgz"; - sha1 = "296aca878a821816e5b85d0a285a99bcff4582f0"; - }; - }; "ipaddr.js-1.8.0" = { name = "ipaddr.js"; packageName = "ipaddr.js"; @@ -16090,13 +16126,13 @@ let sha512 = "pyfU/0kHdISIgslFfZN9nfY1Gk3MquQgUm1mJTjdkEPpkAKNWuBTSqFwewOpR7N351VkErCiyV71zX7mlQQqsg=="; }; }; - "is-arguments-1.0.2" = { + "is-arguments-1.0.4" = { name = "is-arguments"; packageName = "is-arguments"; - version = "1.0.2"; + version = "1.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/is-arguments/-/is-arguments-1.0.2.tgz"; - sha1 = "07e30ad79531844179b642d2d8399435182c8727"; + url = "https://registry.npmjs.org/is-arguments/-/is-arguments-1.0.4.tgz"; + sha512 = "xPh0Rmt8NE65sNzvyUmWgI1tz3mKq74lGA0mL8LYZcoIzKOzDh6HmrYm3d18k60nHerC8A9Km8kYu87zfSFnLA=="; }; }; "is-arrayish-0.2.1" = { @@ -16162,6 +16198,15 @@ let sha512 = "r5p9sxJjYnArLjObpjA4xu5EKI3CuKHkJXMhT7kwbpUyIFD1n5PMAsoPvWnvtZiNz7LjkYDRZhd7FlI0eMijEA=="; }; }; + "is-canonical-base64-1.1.1" = { + name = "is-canonical-base64"; + packageName = "is-canonical-base64"; + version = "1.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/is-canonical-base64/-/is-canonical-base64-1.1.1.tgz"; + sha512 = "o6t/DwgEapC0bsloqtegAQyZzQXaQ5+8fzsyf2KmLqupC2ifLFq/lMQiFCJeGpdSrK1o6GL+WW2lRU050lLlFg=="; + }; + }; "is-ci-1.2.1" = { name = "is-ci"; packageName = "is-ci"; @@ -16252,13 +16297,13 @@ let sha1 = "a6a2f32ffd2dfb04f5ca25ecd0f6b83cf798a1e1"; }; }; - "is-electron-2.1.0" = { + "is-electron-2.2.0" = { name = "is-electron"; packageName = "is-electron"; - version = "2.1.0"; + version = "2.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/is-electron/-/is-electron-2.1.0.tgz"; - sha512 = "dkg5xT383+M6zIbbXW/z7n2nz4SFUi2OSyhntnFYkRdtV+HVEfdjEK+5AWisfYgkpe3WYjTIuh7toaKmSfFVWw=="; + url = "https://registry.npmjs.org/is-electron/-/is-electron-2.2.0.tgz"; + sha512 = "SpMppC2XR3YdxSzczXReBjqs2zGscWQpBIKqwXYBFic0ERaxNVgwLCHwOLZeESfdJQjX0RDvrJ1lBXX2ij+G1Q=="; }; }; "is-equal-shallow-0.1.3" = { @@ -16945,13 +16990,13 @@ let sha512 = "8cJBL5tTd2OS0dM4jz07wQd5g0dCCqIhUxPIGtZfa5L6hWlvV5MHTITy/DBAsF+Oe2LS1X3krBUhNwaGUWpWxw=="; }; }; - "isemail-3.1.3" = { + "isemail-3.2.0" = { name = "isemail"; packageName = "isemail"; - version = "3.1.3"; + version = "3.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/isemail/-/isemail-3.1.3.tgz"; - sha512 = "5xbsG5wYADIcB+mfLsd+nst1V/D+I7EU7LEZPo2GOIMu4JzfcRs5yQoypP4avA7QtUqgxYLKBYNv4IdzBmbhdw=="; + url = "https://registry.npmjs.org/isemail/-/isemail-3.2.0.tgz"; + sha512 = "zKqkK+O+dGqevc93KNsbZ/TqTUFd46MwWjYOoMrjIMZ51eU7DtQG3Wmd9SQQT7i7RVnuTPEiYEWHU3MSbxC1Tg=="; }; }; "isexe-1.1.2" = { @@ -17941,7 +17986,7 @@ let packageName = "kew"; version = "0.1.7"; src = fetchurl { - url = "https://registry.npmjs.org/kew/-/kew-0.1.7.tgz"; + url = "http://registry.npmjs.org/kew/-/kew-0.1.7.tgz"; sha1 = "0a32a817ff1a9b3b12b8c9bacf4bc4d679af8e72"; }; }; @@ -17950,7 +17995,7 @@ let packageName = "kew"; version = "0.7.0"; src = fetchurl { - url = "https://registry.npmjs.org/kew/-/kew-0.7.0.tgz"; + url = "http://registry.npmjs.org/kew/-/kew-0.7.0.tgz"; sha1 = "79d93d2d33363d6fdd2970b335d9141ad591d79b"; }; }; @@ -18287,6 +18332,15 @@ let sha512 = "2qYbbiptPsPWGUI+AgB1gTNXqIjPpALRqrQyNx1zWYNZxhhuzEj/IE4Unu9weEBnsUEocfYe56xOGlAceb8/Fg=="; }; }; + "level-4.0.0" = { + name = "level"; + packageName = "level"; + version = "4.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/level/-/level-4.0.0.tgz"; + sha512 = "4epzCOlEcJ529NOdlAYiuiakS/kZTDdiKSBNJmE1B8bsmA+zEVwcpxyH86qJSQTpOu7SODrlaD9WgPRHLkGutA=="; + }; + }; "level-codec-6.2.0" = { name = "level-codec"; packageName = "level-codec"; @@ -18305,6 +18359,15 @@ let sha512 = "gNZlo1HRHz0BWxzGCyNf7xntAs2HKOPvvRBWtXsoDvEX4vMYnSTBS6ZnxoaiX7nhxSBPpegRa8CQ/hnfGBKk3Q=="; }; }; + "level-codec-9.0.0" = { + name = "level-codec"; + packageName = "level-codec"; + version = "9.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/level-codec/-/level-codec-9.0.0.tgz"; + sha512 = "OIpVvjCcZNP5SdhcNupnsI1zo5Y9Vpm+k/F1gfG5kXrtctlrwanisakweJtE0uA0OpLukRfOQae+Fg0M5Debhg=="; + }; + }; "level-errors-1.1.2" = { name = "level-errors"; packageName = "level-errors"; @@ -18314,6 +18377,15 @@ let sha512 = "Sw/IJwWbPKF5Ai4Wz60B52yj0zYeqzObLh8k1Tk88jVmD51cJSKWSYpRyhVIvFzZdvsPqlH5wfhp/yxdsaQH4w=="; }; }; + "level-errors-2.0.0" = { + name = "level-errors"; + packageName = "level-errors"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/level-errors/-/level-errors-2.0.0.tgz"; + sha512 = "AmY4HCp9h3OiU19uG+3YWkdELgy05OTP/r23aNHaQKWv8DO787yZgsEuGVkoph40uwN+YdUKnANlrxSsoOaaxg=="; + }; + }; "level-iterator-stream-2.0.3" = { name = "level-iterator-stream"; packageName = "level-iterator-stream"; @@ -18323,6 +18395,15 @@ let sha512 = "I6Heg70nfF+e5Y3/qfthJFexhRw/Gi3bIymCoXAlijZdAcLaPuWSJs3KXyTYf23ID6g0o2QF62Yh+grOXY3Rig=="; }; }; + "level-iterator-stream-3.0.1" = { + name = "level-iterator-stream"; + packageName = "level-iterator-stream"; + version = "3.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/level-iterator-stream/-/level-iterator-stream-3.0.1.tgz"; + sha512 = "nEIQvxEED9yRThxvOrq8Aqziy4EGzrxSZK+QzEFAVuJvQ8glfyZ96GB6BoI4sBbLfjMXm2w4vu3Tkcm9obcY0g=="; + }; + }; "level-packager-0.18.0" = { name = "level-packager"; packageName = "level-packager"; @@ -18341,6 +18422,15 @@ let sha512 = "6l3G6dVkmdvHwOJrEA9d9hL6SSFrzwjQoLP8HsvohOgfY/8Z9LyTKNCM5Gc84wtsUWCuIHu6r+S6WrCtTWUJCw=="; }; }; + "level-packager-3.1.0" = { + name = "level-packager"; + packageName = "level-packager"; + version = "3.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/level-packager/-/level-packager-3.1.0.tgz"; + sha512 = "UxVEfK5WH0u0InR3WxTCSAroiorAGKzXWZT6i+nBjambmvINuXFUsFx2Ai3UIjUUtnyWhluv42jMlzUZCsAk9A=="; + }; + }; "level-post-1.0.7" = { name = "level-post"; packageName = "level-post"; @@ -18377,6 +18467,15 @@ let sha512 = "+ANRScj1npQQzv6e4DYAKRjVQZZ+ahMoubKrNP68nIq+l9bYgb+WiXF+14oTcQTg2f7qE9WHGW7rBG9nGSsA+A=="; }; }; + "leveldown-4.0.1" = { + name = "leveldown"; + packageName = "leveldown"; + version = "4.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/leveldown/-/leveldown-4.0.1.tgz"; + sha512 = "ZlBKVSsglPIPJnz4ggB8o2R0bxDxbsMzuQohbfgoFMVApyTE118DK5LNRG0cRju6rt3OkGxe0V6UYACGlq/byg=="; + }; + }; "levelup-0.18.6" = { name = "levelup"; packageName = "levelup"; @@ -18404,6 +18503,15 @@ let sha512 = "us+nTLUyd/eLnclYYddOCdAVw1hnymGx/9p4Jr5ThohStsjLqMVmbYiz6/SYFZEPXNF+AKQSvh6fA2e2KZpC8w=="; }; }; + "levelup-3.1.1" = { + name = "levelup"; + packageName = "levelup"; + version = "3.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/levelup/-/levelup-3.1.1.tgz"; + sha512 = "9N10xRkUU4dShSRRFTBdNaBxofz+PGaIZO962ckboJZiNmLuhVT6FZ6ZKAsICKfUBO76ySaYU6fJWX/jnj3Lcg=="; + }; + }; "leven-1.0.2" = { name = "leven"; packageName = "leven"; @@ -18566,6 +18674,15 @@ let sha1 = "d94a4648f9b1c179d64fa97291268bdb6ce9434f"; }; }; + "listenercount-1.0.1" = { + name = "listenercount"; + packageName = "listenercount"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/listenercount/-/listenercount-1.0.1.tgz"; + sha1 = "84c8a72ab59c4725321480c975e6508342e70937"; + }; + }; "listify-1.0.0" = { name = "listify"; packageName = "listify"; @@ -20258,13 +20375,13 @@ let sha1 = "632b127c3ae5d6ad9e21cfdd9691b63b8944fcd2"; }; }; - "map-filter-reduce-3.2.1" = { + "map-filter-reduce-3.2.2" = { name = "map-filter-reduce"; packageName = "map-filter-reduce"; - version = "3.2.1"; + version = "3.2.2"; src = fetchurl { - url = "https://registry.npmjs.org/map-filter-reduce/-/map-filter-reduce-3.2.1.tgz"; - sha512 = "0+0C/3IVCX8PLXRyBL0umF/YMy3/ch7Zgxu91ZUIXS6YHyv4UVMZlkclUk9rQI63FQ+uvBdHYzo8VPJbIxKTVw=="; + url = "https://registry.npmjs.org/map-filter-reduce/-/map-filter-reduce-3.2.2.tgz"; + sha512 = "p+NIGQbEBxlw/qWwG+NME98G/9kjOQI70hmaH8QEZtIWfTmfMYLKQW4PJChP4izPHNAxlOfv/qefP0+2ZXn84A=="; }; }; "map-merge-1.1.0" = { @@ -20497,7 +20614,7 @@ let packageName = "media-typer"; version = "0.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/media-typer/-/media-typer-0.3.0.tgz"; + url = "http://registry.npmjs.org/media-typer/-/media-typer-0.3.0.tgz"; sha1 = "8710d7af0aa626f8fffa1ce00168545263255748"; }; }; @@ -20641,7 +20758,7 @@ let packageName = "meow"; version = "3.7.0"; src = fetchurl { - url = "https://registry.npmjs.org/meow/-/meow-3.7.0.tgz"; + url = "http://registry.npmjs.org/meow/-/meow-3.7.0.tgz"; sha1 = "72cb668b425228290abbfa856892587308a801fb"; }; }; @@ -20663,13 +20780,13 @@ let sha512 = "CbTqYU17ABaLefO8vCU153ZZlprKYWDljcndKKDCFcYQITzWCXZAVk4QMFZPgvzrnUQ3uItnIE/LoUOwrT15Ig=="; }; }; - "merge-1.2.0" = { + "merge-1.2.1" = { name = "merge"; packageName = "merge"; - version = "1.2.0"; + version = "1.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/merge/-/merge-1.2.0.tgz"; - sha1 = "7531e39d4949c281a66b8c5a6e0265e8b05894da"; + url = "https://registry.npmjs.org/merge/-/merge-1.2.1.tgz"; + sha512 = "VjFo4P5Whtj4vsLzsYBu5ayHhoHJ0UqNm7ibvShmbmoz7tGi0vXaoJbGdB+GmDMLUdg8DpQXEIeVDAe8MaABvQ=="; }; }; "merge-descriptors-0.0.2" = { @@ -20780,6 +20897,15 @@ let sha1 = "5529a4d67654134edcc5266656835b0f851afcee"; }; }; + "microbuffer-1.0.0" = { + name = "microbuffer"; + packageName = "microbuffer"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/microbuffer/-/microbuffer-1.0.0.tgz"; + sha1 = "8b3832ed40c87d51f47bb234913a698a756d19d2"; + }; + }; "microee-0.0.6" = { name = "microee"; packageName = "microee"; @@ -20884,7 +21010,7 @@ let packageName = "mime-db"; version = "1.12.0"; src = fetchurl { - url = "https://registry.npmjs.org/mime-db/-/mime-db-1.12.0.tgz"; + url = "http://registry.npmjs.org/mime-db/-/mime-db-1.12.0.tgz"; sha1 = "3d0c63180f458eb10d325aaa37d7c58ae312e9d7"; }; }; @@ -20893,17 +21019,17 @@ let packageName = "mime-db"; version = "1.33.0"; src = fetchurl { - url = "https://registry.npmjs.org/mime-db/-/mime-db-1.33.0.tgz"; + url = "http://registry.npmjs.org/mime-db/-/mime-db-1.33.0.tgz"; sha512 = "BHJ/EKruNIqJf/QahvxwQZXKygOQ256myeN/Ew+THcAa5q+PjyTTMMeNQC4DZw5AwfvelsUrA6B67NKMqXDbzQ=="; }; }; - "mime-db-1.36.0" = { + "mime-db-1.37.0" = { name = "mime-db"; packageName = "mime-db"; - version = "1.36.0"; + version = "1.37.0"; src = fetchurl { - url = "https://registry.npmjs.org/mime-db/-/mime-db-1.36.0.tgz"; - sha512 = "L+xvyD9MkoYMXb1jAmzI/lWYAxAMCPvIBSWur0PZ5nOf5euahRLVqH//FKW9mWp2lkqUgYiXPgkzfMUFi4zVDw=="; + url = "https://registry.npmjs.org/mime-db/-/mime-db-1.37.0.tgz"; + sha512 = "R3C4db6bgQhlIhPU48fUtdVmKnflq+hRdad7IyKhtFj06VPNVdk2RhiYL3UjQIlso8L+YxAtFkobT0VK+S/ybg=="; }; }; "mime-types-2.0.14" = { @@ -20911,7 +21037,7 @@ let packageName = "mime-types"; version = "2.0.14"; src = fetchurl { - url = "https://registry.npmjs.org/mime-types/-/mime-types-2.0.14.tgz"; + url = "http://registry.npmjs.org/mime-types/-/mime-types-2.0.14.tgz"; sha1 = "310e159db23e077f8bb22b748dabfa4957140aa6"; }; }; @@ -20920,17 +21046,17 @@ let packageName = "mime-types"; version = "2.1.18"; src = fetchurl { - url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.18.tgz"; + url = "http://registry.npmjs.org/mime-types/-/mime-types-2.1.18.tgz"; sha512 = "lc/aahn+t4/SWV/qcmumYjymLsWfN3ELhpmVuUFjgsORruuZPVSwAQryq+HHGvO/SI2KVX26bx+En+zhM8g8hQ=="; }; }; - "mime-types-2.1.20" = { + "mime-types-2.1.21" = { name = "mime-types"; packageName = "mime-types"; - version = "2.1.20"; + version = "2.1.21"; src = fetchurl { - url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.20.tgz"; - sha512 = "HrkrPaP9vGuWbLK1B1FfgAkbqNjIuy4eHlIYnFi7kamZyLLrGlo2mpcx0bBmNpKqBtYtAfGbodDddIgddSJC2A=="; + url = "https://registry.npmjs.org/mime-types/-/mime-types-2.1.21.tgz"; + sha512 = "3iL6DbwpyLzjR3xHSFNFeb9Nz/M8WDkX33t1GFQnFOllWk8pOrh/LSrB5OXlnlW5P9LH73X6loW/eogc+F5lJg=="; }; }; "mimelib-0.3.1" = { @@ -21086,13 +21212,13 @@ let sha512 = "FyBrT/d0d4+uiZRbqznPXqw3IpZZG3gl3wKWiX784FycUKVwBt0uLBFkQrtE4tZOrgo78nZp2jnKz3L65T5LdQ=="; }; }; - "minipass-2.3.4" = { + "minipass-2.3.5" = { name = "minipass"; packageName = "minipass"; - version = "2.3.4"; + version = "2.3.5"; src = fetchurl { - url = "https://registry.npmjs.org/minipass/-/minipass-2.3.4.tgz"; - sha512 = "mlouk1OHlaUE8Odt1drMtG1bAJA4ZA6B/ehysgV0LUIrDHdKgo1KorZq3pK0b/7Z7LJIQ12MNM6aC+Tn6lUZ5w=="; + url = "https://registry.npmjs.org/minipass/-/minipass-2.3.5.tgz"; + sha512 = "Gi1W4k059gyRbyVUZQ4mEqLm0YIUiGYfvxhF6SIlk3ui1WVxMTGfGdQ2SInh3PDrRTVvPKgULkpJtT4RH10+VA=="; }; }; "minizlib-1.1.1" = { @@ -21302,13 +21428,13 @@ let sha1 = "359a19ec634cda3c706c8709adda54c0329aaec4"; }; }; - "moment-timezone-0.5.21" = { + "moment-timezone-0.5.23" = { name = "moment-timezone"; packageName = "moment-timezone"; - version = "0.5.21"; + version = "0.5.23"; src = fetchurl { - url = "https://registry.npmjs.org/moment-timezone/-/moment-timezone-0.5.21.tgz"; - sha512 = "j96bAh4otsgj3lKydm3K7kdtA3iKf2m6MY2iSYCzCm5a1zmHo1g+aK3068dDEeocLZQIS9kU8bsdQHLqEvgW0A=="; + url = "https://registry.npmjs.org/moment-timezone/-/moment-timezone-0.5.23.tgz"; + sha512 = "WHFH85DkCfiNMDX5D3X7hpNH3/PUhjTGcD0U1SgfBGZxJ3qUmJh5FdvaFjcClxOvB3rzdfj4oRffbI38jEnC1w=="; }; }; "mongodb-1.2.14" = { @@ -21347,6 +21473,15 @@ let sha1 = "5ba5adc7aac85e1d7ce77be847161ed246b39603"; }; }; + "moo-0.4.3" = { + name = "moo"; + packageName = "moo"; + version = "0.4.3"; + src = fetchurl { + url = "https://registry.npmjs.org/moo/-/moo-0.4.3.tgz"; + sha512 = "gFD2xGCl8YFgGHsqJ9NKRVdwlioeW3mI1iqfLNYQOv0+6JRwG58Zk9DIGQgyIaffSYaO1xsKnMaYzzNr1KyIAw=="; + }; + }; "mooremachine-2.2.1" = { name = "mooremachine"; packageName = "mooremachine"; @@ -21572,15 +21707,6 @@ let sha512 = "6HuCZHA57WtNUzrKIvjJ8OMxigzveJ6D5i13y6TsgGu3X3zxABpuBvChpppOoGdB9SyWZcmqUs1fwUV/PpSQ7Q=="; }; }; - "multer-1.3.1" = { - name = "multer"; - packageName = "multer"; - version = "1.3.1"; - src = fetchurl { - url = "https://registry.npmjs.org/multer/-/multer-1.3.1.tgz"; - sha512 = "JHdEoxkA/5NgZRo91RNn4UT+HdcJV9XUo01DTkKC7vo1erNIngtuaw9Y0WI8RdTlyi+wMIbunflhghzVLuGJyw=="; - }; - }; "multer-1.4.1" = { name = "multer"; packageName = "multer"; @@ -21707,13 +21833,22 @@ let sha1 = "2a8f2ddf70eed564dff2d57f1e1a137d9f05078b"; }; }; - "multiserver-1.13.5" = { + "multiserver-1.13.7" = { name = "multiserver"; packageName = "multiserver"; - version = "1.13.5"; + version = "1.13.7"; src = fetchurl { - url = "https://registry.npmjs.org/multiserver/-/multiserver-1.13.5.tgz"; - sha512 = "1bxts3gFkHKJsGAaWR9D4nFLVH995eiEt38n/jPf1dni/FI0o6PH3hlar3ge/bMs58FX/T+DzrGNXZhEkMVFqA=="; + url = "https://registry.npmjs.org/multiserver/-/multiserver-1.13.7.tgz"; + sha512 = "nQKAe6+u7nWJY29pJjegltw0ROj2bDc2bCTm9Bnr4EQrp5H5Tav+ESUjgl3D4vuQgCeveb4h+CtLtjB8QnK1Dw=="; + }; + }; + "multiserver-address-1.0.1" = { + name = "multiserver-address"; + packageName = "multiserver-address"; + version = "1.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/multiserver-address/-/multiserver-address-1.0.1.tgz"; + sha512 = "IfZMAGs9onCLkYNSnNBri3JxuvhQYllMyh3W9ry86iEDcfW9uPVsHTHDsjDxQtL+dPq3byshmA+Y4LN2wLHwNw=="; }; }; "multistream-2.1.1" = { @@ -21941,22 +22076,31 @@ let sha1 = "4f3152e09540fde28c76f44b19bbcd1d5a42478d"; }; }; - "nanobus-4.3.4" = { + "nanobus-4.3.5" = { name = "nanobus"; packageName = "nanobus"; - version = "4.3.4"; + version = "4.3.5"; src = fetchurl { - url = "https://registry.npmjs.org/nanobus/-/nanobus-4.3.4.tgz"; - sha512 = "N1IBreECNaxmsaOLMqqm01K7XIp+sMvoVX8mvmT/p1VjM2FLcBU0lj0FalKooi2/2i+ph9WsEoEogOJevqQ6LQ=="; + url = "https://registry.npmjs.org/nanobus/-/nanobus-4.3.5.tgz"; + sha512 = "6UlqagLV9/ADqcTU60mipAPEd16WDbO+a9WeeGVn9RucHKNDTcPt9MOf8ZmAvbA3V2CV+EJS28eupNalg4YF8Q=="; }; }; - "nanoid-1.3.0" = { + "nanoid-1.3.4" = { name = "nanoid"; packageName = "nanoid"; - version = "1.3.0"; + version = "1.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/nanoid/-/nanoid-1.3.0.tgz"; - sha512 = "OP8SoC91Kyjl1sdSTEnM1xYh4gUEOSkUl6wRBUklWOPyfPRbeJbhvdhQYXEjVtZ1LI9amVMkIWQI2nO8O7DL9A=="; + url = "https://registry.npmjs.org/nanoid/-/nanoid-1.3.4.tgz"; + sha512 = "4ug4BsuHxiVHoRUe1ud6rUFT3WUMmjXt1W0quL0CviZQANdan7D8kqN5/maw53hmAApY/jfzMRkC57BNNs60ZQ=="; + }; + }; + "nanoid-2.0.0" = { + name = "nanoid"; + packageName = "nanoid"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/nanoid/-/nanoid-2.0.0.tgz"; + sha512 = "SG2qscLE3iM4C0CNzGrsAojJHSVHMS1J8NnvJ31P1lH8P0hGHOiafmniNJz6w6q7vuoDlV7RdySlJgtqkFEVtQ=="; }; }; "nanolru-1.0.0" = { @@ -22143,6 +22287,24 @@ let sha1 = "ae603b36b134bcec347b452422b0bf98d5832ec8"; }; }; + "nearley-2.15.1" = { + name = "nearley"; + packageName = "nearley"; + version = "2.15.1"; + src = fetchurl { + url = "https://registry.npmjs.org/nearley/-/nearley-2.15.1.tgz"; + sha512 = "8IUY/rUrKz2mIynUGh8k+tul1awMKEjeHHC5G3FHvvyAW6oq4mQfNp2c0BMea+sYZJvYcrrM6GmZVIle/GRXGw=="; + }; + }; + "neat-csv-2.1.0" = { + name = "neat-csv"; + packageName = "neat-csv"; + version = "2.1.0"; + src = fetchurl { + url = "http://registry.npmjs.org/neat-csv/-/neat-csv-2.1.0.tgz"; + sha1 = "06f58360c4c3b955bd467ddc85ae4511a3907a4c"; + }; + }; "neat-input-1.8.0" = { name = "neat-input"; packageName = "neat-input"; @@ -22338,7 +22500,7 @@ let packageName = "next-tick"; version = "1.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/next-tick/-/next-tick-1.0.0.tgz"; + url = "http://registry.npmjs.org/next-tick/-/next-tick-1.0.0.tgz"; sha1 = "ca86d1fe8828169b0120208e3dc8424b9db8342c"; }; }; @@ -22369,13 +22531,13 @@ let sha512 = "rmTZ9kz+f3rCvK2TD1Ue/oZlns7OGoIWP4fc3llxxRXlOkHKoWPPWJOfFYpITabSow43QJbRIoHQXtt10VldyQ=="; }; }; - "node-abi-2.4.5" = { + "node-abi-2.5.0" = { name = "node-abi"; packageName = "node-abi"; - version = "2.4.5"; + version = "2.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/node-abi/-/node-abi-2.4.5.tgz"; - sha512 = "aa/UC6Nr3+tqhHGRsAuw/edz7/q9nnetBrKWxj6rpTtm+0X9T1qU7lIEHMS3yN9JwAbRiKUbRRFy1PLz/y3aaA=="; + url = "https://registry.npmjs.org/node-abi/-/node-abi-2.5.0.tgz"; + sha512 = "9g2twBGSP6wIR5PW7tXvAWnEWKJDH/VskdXp168xsw9VVxpEGov8K4jsP4/VeoC7b2ZAyzckvMCuQuQlw44lXg=="; }; }; "node-alias-1.0.4" = { @@ -22387,13 +22549,13 @@ let sha1 = "1f1b916b56b9ea241c0135f97ced6940f556f292"; }; }; - "node-appc-0.2.48" = { + "node-appc-0.2.49" = { name = "node-appc"; packageName = "node-appc"; - version = "0.2.48"; + version = "0.2.49"; src = fetchurl { - url = "https://registry.npmjs.org/node-appc/-/node-appc-0.2.48.tgz"; - sha512 = "fKPynW61a+PmqssitvJXxN2FZAN/w4eBvmE5zqJXl+eDfOip/b26y7SIGGJOn23KjAYX2uyl2Oy/+qTaRz/gHQ=="; + url = "https://registry.npmjs.org/node-appc/-/node-appc-0.2.49.tgz"; + sha512 = "PldEN7CgEy7ekSZyomgpajLX7STCZPDJI6rGy7FCbWi7ZJgTt9/C3omCxPkIKVjtwcXzXoSA31zUWUnBzTkEUg=="; }; }; "node-cache-4.2.0" = { @@ -22432,13 +22594,13 @@ let sha1 = "ab884e8e7e57e38a944753cec706f788d1768bb5"; }; }; - "node-fetch-2.2.0" = { + "node-fetch-2.2.1" = { name = "node-fetch"; packageName = "node-fetch"; - version = "2.2.0"; + version = "2.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/node-fetch/-/node-fetch-2.2.0.tgz"; - sha512 = "OayFWziIxiHY8bCUyLX6sTpDH8Jsbp4FfYd1j1f7vZyfgkcOnAyM4oQR16f8a0s7Gl/viMGRey8eScYk4V4EZA=="; + url = "https://registry.npmjs.org/node-fetch/-/node-fetch-2.2.1.tgz"; + sha512 = "ObXBpNCD3A/vYQiQtEWl7DuqjAXjfptYFuGHLdPl5U19/6kJuZV+8uMHLrkj3wJrJoyfg4nhgyFixZdaZoAiEQ=="; }; }; "node-fetch-npm-2.0.2" = { @@ -22531,6 +22693,15 @@ let sha512 = "MIBs+AAd6dJ2SklbbE8RUDRlIVhU8MaNLh1A9SUZDUHPiZkWLFde6UNwG41yQHZEToHgJMXqyVZ9UcS/ReOVTg=="; }; }; + "node-notifier-5.3.0" = { + name = "node-notifier"; + packageName = "node-notifier"; + version = "5.3.0"; + src = fetchurl { + url = "https://registry.npmjs.org/node-notifier/-/node-notifier-5.3.0.tgz"; + sha512 = "AhENzCSGZnZJgBARsUjnQ7DnZbzyP+HxlVXuD0xqAnvL8q+OqtSX7lGg9e8nHzwXkMMXNdVeqq4E2M3EUAqX6Q=="; + }; + }; "node-phantom-simple-2.2.4" = { name = "node-phantom-simple"; packageName = "node-phantom-simple"; @@ -22576,31 +22747,31 @@ let sha512 = "Bb9M5bFrOqoFxBVxfstBM/g+VPaV4EPQptXQBMrlsCd3P40CXcGL0mDylXU+3cekWNd5hLHfqTHvXJdkowHGDw=="; }; }; - "node-red-node-rbe-0.2.3" = { + "node-red-node-rbe-0.2.4" = { name = "node-red-node-rbe"; packageName = "node-red-node-rbe"; - version = "0.2.3"; + version = "0.2.4"; src = fetchurl { - url = "https://registry.npmjs.org/node-red-node-rbe/-/node-red-node-rbe-0.2.3.tgz"; - sha512 = "5+MtH9t8tX6Aw6M+SeoyGR23XplNTOln3aTQ7El9tj/606bxea4GxYyvV4ymTmuoODz3GXQlLLQVdGkFLyIdDQ=="; + url = "https://registry.npmjs.org/node-red-node-rbe/-/node-red-node-rbe-0.2.4.tgz"; + sha512 = "ft/8/dTRGzGQ9vCnAzuBxzR+aDv4Yun/vuSKi/eI5Qj2/ZBal28L9HpWziSTWlLrMhZns8CRz7s2p84P2ee/vA=="; }; }; - "node-red-node-twitter-1.1.3" = { + "node-red-node-twitter-1.1.4" = { name = "node-red-node-twitter"; packageName = "node-red-node-twitter"; - version = "1.1.3"; + version = "1.1.4"; src = fetchurl { - url = "https://registry.npmjs.org/node-red-node-twitter/-/node-red-node-twitter-1.1.3.tgz"; - sha512 = "H4q6wfIeDkDp7ykFh4nK7vrnJa9NI3FmC2rASabup/9LEJ5XD5KXH07eqo+B3Cf3jAzJDmL7RFEFucA8C1oqCw=="; + url = "https://registry.npmjs.org/node-red-node-twitter/-/node-red-node-twitter-1.1.4.tgz"; + sha512 = "mkw8HOosXHMBRdyJkio77vPx4Ls5IY26P5ZyoMWmKMkimXKTnX00DdpmNlkW+dHwMDYq1H66WzFtQhNOdEAbgA=="; }; }; - "node-request-by-swagger-1.1.3" = { + "node-request-by-swagger-1.1.4" = { name = "node-request-by-swagger"; packageName = "node-request-by-swagger"; - version = "1.1.3"; + version = "1.1.4"; src = fetchurl { - url = "https://registry.npmjs.org/node-request-by-swagger/-/node-request-by-swagger-1.1.3.tgz"; - sha512 = "granjsEA0c+1GnJaKnOjJy1E3wWLADUnAg+x1eopWOo+oMDfRYKJjCBaInUgrli/yEnvUAJoymGhExP/6tcOyQ=="; + url = "https://registry.npmjs.org/node-request-by-swagger/-/node-request-by-swagger-1.1.4.tgz"; + sha512 = "hwaTaFPUwNKns5qXwGJpLQM3Z5zRluYeAxpYy1L8fWmWdT/DjLmsnW8/oGlSN8Vo4R28c2znfUoBUiB/RlPptw=="; }; }; "node-ssdp-2.9.1" = { @@ -22662,7 +22833,7 @@ let packageName = "node.extend"; version = "1.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/node.extend/-/node.extend-1.0.0.tgz"; + url = "http://registry.npmjs.org/node.extend/-/node.extend-1.0.0.tgz"; sha1 = "ab83960c477280d01ba5554a0d8fd3acfe39336e"; }; }; @@ -22675,6 +22846,15 @@ let sha1 = "7525a2875677ea534784a5e10ac78956139614df"; }; }; + "node.extend-2.0.1" = { + name = "node.extend"; + packageName = "node.extend"; + version = "2.0.1"; + src = fetchurl { + url = "https://registry.npmjs.org/node.extend/-/node.extend-2.0.1.tgz"; + sha512 = "42zXr2Cy16E58KEHm8vz2LE3IJWW0xUrQw0L+R2sII7NIiqKMa9JlwX02YFHg5+IKDg+Es1ZE8nD7ucUWR16UA=="; + }; + }; "nodebmc-0.0.7" = { name = "nodebmc"; packageName = "nodebmc"; @@ -22747,13 +22927,13 @@ let sha1 = "586db8101db30cb4438eb546737a41aad0cf13d5"; }; }; - "nodemon-1.18.4" = { + "nodemon-1.18.6" = { name = "nodemon"; packageName = "nodemon"; - version = "1.18.4"; + version = "1.18.6"; src = fetchurl { - url = "https://registry.npmjs.org/nodemon/-/nodemon-1.18.4.tgz"; - sha512 = "hyK6vl65IPnky/ee+D3IWvVGgJa/m3No2/Xc/3wanS6Ce1MWjCzH6NnhPJ/vZM+6JFym16jtHx51lmCMB9HDtg=="; + url = "https://registry.npmjs.org/nodemon/-/nodemon-1.18.6.tgz"; + sha512 = "4pHQNYEZun+IkIC2jCaXEhkZnfA7rQe73i8RkdRyDJls/K+WxR7IpI5uNUsAvQ0zWvYcCDNGD+XVtw2ZG86/uQ=="; }; }; "nodesecurity-npm-utils-6.0.0" = { @@ -22765,6 +22945,15 @@ let sha512 = "NLRle1woNaT2orR6fue2jNqkhxDTktgJj3sZxvR/8kp21pvOY7Gwlx5wvo0H8ZVPqdgd2nE2ADB9wDu5Cl8zNg=="; }; }; + "nomnom-1.6.2" = { + name = "nomnom"; + packageName = "nomnom"; + version = "1.6.2"; + src = fetchurl { + url = "https://registry.npmjs.org/nomnom/-/nomnom-1.6.2.tgz"; + sha1 = "84a66a260174408fc5b77a18f888eccc44fb6971"; + }; + }; "nomnom-1.8.1" = { name = "nomnom"; packageName = "nomnom"; @@ -22981,13 +23170,13 @@ let sha512 = "COlxSO5PK9UvZXIa7/sqJDZOlffWFx9+CKJJWkdbhUJMBwcf9sof2jxt4uiVsl+nY3sy0/XFGl4iGr8GoKfiXA=="; }; }; - "npm-pick-manifest-2.1.0" = { + "npm-pick-manifest-2.2.3" = { name = "npm-pick-manifest"; packageName = "npm-pick-manifest"; - version = "2.1.0"; + version = "2.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/npm-pick-manifest/-/npm-pick-manifest-2.1.0.tgz"; - sha512 = "q9zLP8cTr8xKPmMZN3naxp1k/NxVFsjxN6uWuO1tiw9gxg7wZWQ/b5UTfzD0ANw2q1lQxdLKTeCCksq+bPSgbQ=="; + url = "https://registry.npmjs.org/npm-pick-manifest/-/npm-pick-manifest-2.2.3.tgz"; + sha512 = "+IluBC5K201+gRU85vFlUwX3PFShZAbAgDNp2ewJdWMVSppdo/Zih0ul2Ecky/X7b51J7LrrUAP+XOmOCvYZqA=="; }; }; "npm-prefix-1.2.0" = { @@ -23112,7 +23301,7 @@ let packageName = "npmlog"; version = "2.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/npmlog/-/npmlog-2.0.4.tgz"; + url = "http://registry.npmjs.org/npmlog/-/npmlog-2.0.4.tgz"; sha1 = "98b52530f2514ca90d09ec5b22c8846722375692"; }; }; @@ -23130,7 +23319,7 @@ let packageName = "nprogress"; version = "0.2.0"; src = fetchurl { - url = "https://registry.npmjs.org/nprogress/-/nprogress-0.2.0.tgz"; + url = "http://registry.npmjs.org/nprogress/-/nprogress-0.2.0.tgz"; sha1 = "cb8f34c53213d895723fcbab907e9422adbcafb1"; }; }; @@ -23143,13 +23332,13 @@ let sha1 = "883ca2ec605f5ed64a4d5190b2625401928f8f8d"; }; }; - "nth-check-1.0.1" = { + "nth-check-1.0.2" = { name = "nth-check"; packageName = "nth-check"; - version = "1.0.1"; + version = "1.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/nth-check/-/nth-check-1.0.1.tgz"; - sha1 = "9929acdf628fc2c41098deab82ac580cf149aae4"; + url = "https://registry.npmjs.org/nth-check/-/nth-check-1.0.2.tgz"; + sha512 = "WeBOdju8SnzPN5vTUJYxYUxLeXpCaVP5i5e0LF8fg7WORF2Wd7wFX/pk0tYZk7s8T+J7VLy0Da6J1+wCT0AtHg=="; }; }; "number-is-nan-1.0.1" = { @@ -23621,13 +23810,13 @@ let sha1 = "42c3e18ec95466b6bf0dc42f3a2945c3f0cad8fc"; }; }; - "opencollective-postinstall-2.0.0" = { + "opencollective-postinstall-2.0.1" = { name = "opencollective-postinstall"; packageName = "opencollective-postinstall"; - version = "2.0.0"; + version = "2.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/opencollective-postinstall/-/opencollective-postinstall-2.0.0.tgz"; - sha512 = "XAe80GycLe2yRGnJsUtt+EO5lk06XYRQt4kJJe53O2kJHPZJOZ+XMF/b47HW96e6LhfKVpwnXVr/s56jhV98jg=="; + url = "https://registry.npmjs.org/opencollective-postinstall/-/opencollective-postinstall-2.0.1.tgz"; + sha512 = "saQQ9hjLwu/oS0492eyYotoh+bra1819cfAT5rjY/e4REWwuc8IgZ844Oo44SiftWcJuBiqp0SA0BFVbmLX0IQ=="; }; }; "opener-1.4.3" = { @@ -23702,13 +23891,13 @@ let sha512 = "YF9MNdVy/0qvJvDtunAOzFw9iasOQHpVthTCvGzxt61Il64AYSGdK+rYwld7NAfk9qJ7dt+hymBNSc9LNYS+Sw=="; }; }; - "optimism-0.6.6" = { + "optimism-0.6.8" = { name = "optimism"; packageName = "optimism"; - version = "0.6.6"; + version = "0.6.8"; src = fetchurl { - url = "https://registry.npmjs.org/optimism/-/optimism-0.6.6.tgz"; - sha512 = "1Y6LY7pYbXP5y6yeXYfXhxJi9hsxYAZWpt7bBp4seAwfcYtaN7tq9wot/pdrhyI809/K4gDm3BcZcEkmwGevjg=="; + url = "https://registry.npmjs.org/optimism/-/optimism-0.6.8.tgz"; + sha512 = "bN5n1KCxSqwBDnmgDnzMtQTHdL+uea2HYFx1smvtE+w2AMl0Uy31g0aXnP/Nt85OINnMJPRpJyfRQLTCqn5Weg=="; }; }; "optimist-0.2.8" = { @@ -24206,13 +24395,13 @@ let sha1 = "79b302fc144cdfbb4ab6feba7040e6a5d99c79c7"; }; }; - "pacote-9.1.0" = { + "pacote-9.2.3" = { name = "pacote"; packageName = "pacote"; - version = "9.1.0"; + version = "9.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/pacote/-/pacote-9.1.0.tgz"; - sha512 = "AFXaSWhOtQf3jHqEvg+ZYH/dfT8TKq6TKspJ4qEFwVVuh5aGvMIk6SNF8vqfzz+cBceDIs9drOcpBbrPai7i+g=="; + url = "https://registry.npmjs.org/pacote/-/pacote-9.2.3.tgz"; + sha512 = "Y3+yY3nBRAxMlZWvr62XLJxOwCmG9UmkGZkFurWHoCjqF0cZL72cTOCRJTvWw8T4OhJS2RTg13x4oYYriauvEw=="; }; }; "pad-0.0.5" = { @@ -24986,7 +25175,7 @@ let packageName = "phantomjs"; version = "1.9.20"; src = fetchurl { - url = "https://registry.npmjs.org/phantomjs/-/phantomjs-1.9.20.tgz"; + url = "http://registry.npmjs.org/phantomjs/-/phantomjs-1.9.20.tgz"; sha1 = "4424aca20e14d255c0b0889af6f6b8973da10e0d"; }; }; @@ -24999,6 +25188,15 @@ let sha1 = "efd212a4a3966d3647684ea8ba788549be2aefef"; }; }; + "pid-from-port-1.1.3" = { + name = "pid-from-port"; + packageName = "pid-from-port"; + version = "1.1.3"; + src = fetchurl { + url = "https://registry.npmjs.org/pid-from-port/-/pid-from-port-1.1.3.tgz"; + sha512 = "OlE82n3yMOE5dY9RMOwxhoWefeMlxwk5IVxoj0sSzSFIlmvhN4obzTvO3s/d/b5JhcgXikjaspsy/HuUDTqbBg=="; + }; + }; "piece-length-1.0.0" = { name = "piece-length"; packageName = "piece-length"; @@ -25013,7 +25211,7 @@ let packageName = "pify"; version = "2.3.0"; src = fetchurl { - url = "https://registry.npmjs.org/pify/-/pify-2.3.0.tgz"; + url = "http://registry.npmjs.org/pify/-/pify-2.3.0.tgz"; sha1 = "ed141a6ac043a849ea588498e7dca8b15330e90c"; }; }; @@ -25296,13 +25494,13 @@ let sha1 = "8dd70c4fe7c694109add784ffe80eacac1e7b28d"; }; }; - "portfinder-1.0.17" = { + "portfinder-1.0.19" = { name = "portfinder"; packageName = "portfinder"; - version = "1.0.17"; + version = "1.0.19"; src = fetchurl { - url = "https://registry.npmjs.org/portfinder/-/portfinder-1.0.17.tgz"; - sha512 = "syFcRIRzVI1BoEFOCaAiizwDolh1S1YXSodsVhncbhjzjZQulhczNRbqnUl9N31Q4dKGOXsNDqxC2BWBgSMqeQ=="; + url = "https://registry.npmjs.org/portfinder/-/portfinder-1.0.19.tgz"; + sha512 = "23aeQKW9KgHe6citUrG3r9HjeX6vls0h713TAa+CwTKZwNIr/pD2ApaxYF4Um3ZZyq4ar+Siv3+fhoHaIwSOSw=="; }; }; "posix-character-classes-0.1.1" = { @@ -25440,22 +25638,22 @@ let sha1 = "c438ca2ca33e3927671db4ab69c0e52f936a4f0f"; }; }; - "prisma-json-schema-0.1.1" = { + "prisma-json-schema-0.1.3" = { name = "prisma-json-schema"; packageName = "prisma-json-schema"; - version = "0.1.1"; + version = "0.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/prisma-json-schema/-/prisma-json-schema-0.1.1.tgz"; - sha512 = "epi2cDTQu/xk//H79dqRIzqk9ZEEqgcvHR7M/UhG/9UcSYY3OP/tJKDj5AYk86Xt2p5muDp3+y8ZGVNGZVQgNw=="; + url = "https://registry.npmjs.org/prisma-json-schema/-/prisma-json-schema-0.1.3.tgz"; + sha512 = "XZrf2080oR81mY8/OC8al68HiwBm0nXlFE727JIia0ZbNqwuV4MyRYk6E0+OIa6/9KEYxZrcAmoBs3EW1cCvnA=="; }; }; - "prisma-yml-1.0.93" = { + "prisma-yml-1.20.0-beta.18" = { name = "prisma-yml"; packageName = "prisma-yml"; - version = "1.0.93"; + version = "1.20.0-beta.18"; src = fetchurl { - url = "https://registry.npmjs.org/prisma-yml/-/prisma-yml-1.0.93.tgz"; - sha512 = "np7VXqA4t+qhmn2GXGIOL19IMWSyrI1T8uJH8Lrla9uslvSxch6bzarYcQgKsc+sTL/g1zbvNgRl19cr/CUuNQ=="; + url = "https://registry.npmjs.org/prisma-yml/-/prisma-yml-1.20.0-beta.18.tgz"; + sha512 = "wI/lOQrD78de2+ZNzJlbEYcYiUANtpdyT0VzAS+YbF5+1/O+shOnpwYsBtjrVL5Er0RwMkwH7j+oZQM61ENBMQ=="; }; }; "prismjs-1.15.0" = { @@ -25512,6 +25710,15 @@ let sha1 = "1638d8a8e34c2f440a91db95ab9aeb677fc185cf"; }; }; + "process-exists-3.1.0" = { + name = "process-exists"; + packageName = "process-exists"; + version = "3.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/process-exists/-/process-exists-3.1.0.tgz"; + sha512 = "X11vso1oNLtyDa2j8fsMol2fph1+5PoQ4vpEc1it/rM8eLuRTmrmTg4jfn82WhNur241AYitgjKCgmlgMRZesw=="; + }; + }; "process-nextick-args-1.0.7" = { name = "process-nextick-args"; packageName = "process-nextick-args"; @@ -25535,17 +25742,17 @@ let packageName = "progress"; version = "1.1.8"; src = fetchurl { - url = "https://registry.npmjs.org/progress/-/progress-1.1.8.tgz"; + url = "http://registry.npmjs.org/progress/-/progress-1.1.8.tgz"; sha1 = "e260c78f6161cdd9b0e56cc3e0a85de17c7a57be"; }; }; - "progress-2.0.0" = { + "progress-2.0.1" = { name = "progress"; packageName = "progress"; - version = "2.0.0"; + version = "2.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/progress/-/progress-2.0.0.tgz"; - sha1 = "8a1be366bf8fc23db2bd23f10c6fe920b4389d1f"; + url = "https://registry.npmjs.org/progress/-/progress-2.0.1.tgz"; + sha512 = "OE+a6vzqazc+K6LxJrX5UPyKFvGnL5CYmq2jFGNIBWHpc4QyE49/YOumcrpQFJpfejmvRtbJzgO1zPmMCqlbBg=="; }; }; "progress-string-1.2.2" = { @@ -25746,13 +25953,13 @@ let sha512 = "SmjEuAf3hc3h3rWZ6V1YaaQw2MNJWK848gLJgzx/sefOJdNLujKinJVXIS0q2cBQpQn2Q32TinawZyDZPzm4kQ=="; }; }; - "protoduck-5.0.0" = { + "protoduck-5.0.1" = { name = "protoduck"; packageName = "protoduck"; - version = "5.0.0"; + version = "5.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/protoduck/-/protoduck-5.0.0.tgz"; - sha512 = "agsGWD8/RZrS4ga6v82Fxb0RHIS2RZnbsSue6A9/MBRhB/jcqOANAMNrqM9900b8duj+Gx+T/JMy5IowDoO/hQ=="; + url = "https://registry.npmjs.org/protoduck/-/protoduck-5.0.1.tgz"; + sha512 = "WxoCeDCoCBY55BMvj4cAEjdVUFGRWed9ZxPlqTKYyw1nDDTQ4pqmnIMAGfJlg7Dx35uB/M+PHJPTmGOvaCaPTg=="; }; }; "proxy-addr-1.0.10" = { @@ -25764,15 +25971,6 @@ let sha1 = "0d40a82f801fc355567d2ecb65efe3f077f121c5"; }; }; - "proxy-addr-1.1.5" = { - name = "proxy-addr"; - packageName = "proxy-addr"; - version = "1.1.5"; - src = fetchurl { - url = "https://registry.npmjs.org/proxy-addr/-/proxy-addr-1.1.5.tgz"; - sha1 = "71c0ee3b102de3f202f3b64f608d173fcba1a918"; - }; - }; "proxy-addr-2.0.4" = { name = "proxy-addr"; packageName = "proxy-addr"; @@ -25836,6 +26034,15 @@ let sha1 = "d3fc114ba06995a45ec6893f484ceb1d78f5f476"; }; }; + "ps-list-4.1.0" = { + name = "ps-list"; + packageName = "ps-list"; + version = "4.1.0"; + src = fetchurl { + url = "https://registry.npmjs.org/ps-list/-/ps-list-4.1.0.tgz"; + sha512 = "DSpMj8PI5W7v2G4+rE+BymTKZPjlu6t/M1N6rPAa6Hwn+/e8jDmFJaq8/kpoGCvwd75g2h5DbjF2MduOMNyrsQ=="; + }; + }; "ps-tree-0.0.3" = { name = "ps-tree"; packageName = "ps-tree"; @@ -26007,15 +26214,6 @@ let sha1 = "7017a984c3b834de77bac38c10b776f22dfc1843"; }; }; - "pull-abortable-4.1.1" = { - name = "pull-abortable"; - packageName = "pull-abortable"; - version = "4.1.1"; - src = fetchurl { - url = "https://registry.npmjs.org/pull-abortable/-/pull-abortable-4.1.1.tgz"; - sha1 = "b3ad5aefb4116b25916d26db89393ac98d0dcea1"; - }; - }; "pull-block-filter-1.0.0" = { name = "pull-block-filter"; packageName = "pull-block-filter"; @@ -26241,13 +26439,13 @@ let sha1 = "5f99af15e8846d48ecf625edc248ec2cf57f6b0d"; }; }; - "pull-inactivity-2.1.2" = { + "pull-inactivity-2.1.3" = { name = "pull-inactivity"; packageName = "pull-inactivity"; - version = "2.1.2"; + version = "2.1.3"; src = fetchurl { - url = "https://registry.npmjs.org/pull-inactivity/-/pull-inactivity-2.1.2.tgz"; - sha1 = "37a3d6ebbfac292cd435f5e481e5074c8c1fad75"; + url = "https://registry.npmjs.org/pull-inactivity/-/pull-inactivity-2.1.3.tgz"; + sha512 = "swJ/jwkIN/O1bQCE3iY7Xy9r3gYuJ50MXaxZilw/HIduAy4tJu+vcz2/If0L+xNK7Ku/FfjtVbTpRTe7sf3hmA=="; }; }; "pull-kvdiff-0.0.0" = { @@ -26394,13 +26592,13 @@ let sha1 = "95d0c60ce6ea9c8bab8ca0b16e1f518352ed4e4f"; }; }; - "pull-sort-1.0.1" = { + "pull-sort-1.0.2" = { name = "pull-sort"; packageName = "pull-sort"; - version = "1.0.1"; + version = "1.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/pull-sort/-/pull-sort-1.0.1.tgz"; - sha1 = "a8ab0c70c86f45343c9accc939fc42769ad3dc6d"; + url = "https://registry.npmjs.org/pull-sort/-/pull-sort-1.0.2.tgz"; + sha512 = "jGcAHMP+0Le+bEIhSODlbNNd3jW+S6XrXOlhVzfcKU5HQZjP92OzQSgHHSlwvWRsiTWi+UGgbFpL/5gGgmFoVQ=="; }; }; "pull-stream-2.27.0" = { @@ -26439,22 +26637,13 @@ let sha512 = "hJn4POeBrkttshdNl0AoSCVjMVSuBwuHocMerUdoZ2+oIUzrWHFTwJMlbHND7OiKLVgvz6TFj8ZUVywUMXccbw=="; }; }; - "pull-stream-to-stream-1.3.4" = { - name = "pull-stream-to-stream"; - packageName = "pull-stream-to-stream"; - version = "1.3.4"; - src = fetchurl { - url = "https://registry.npmjs.org/pull-stream-to-stream/-/pull-stream-to-stream-1.3.4.tgz"; - sha1 = "3f81d8216bd18d2bfd1a198190471180e2738399"; - }; - }; - "pull-stringify-1.2.2" = { + "pull-stringify-2.0.0" = { name = "pull-stringify"; packageName = "pull-stringify"; - version = "1.2.2"; + version = "2.0.0"; src = fetchurl { - url = "http://registry.npmjs.org/pull-stringify/-/pull-stringify-1.2.2.tgz"; - sha1 = "5a1c34e0075faf2f2f6d46004e36dccd33bd7c7c"; + url = "http://registry.npmjs.org/pull-stringify/-/pull-stringify-2.0.0.tgz"; + sha1 = "22ba31da95af0888e0fb559238b1fa915a6a5b64"; }; }; "pull-through-1.0.18" = { @@ -26772,24 +26961,6 @@ let sha1 = "13e26d28ad6b0ffaa91312cd3bf708ed351e7233"; }; }; - "qs-6.5.0" = { - name = "qs"; - packageName = "qs"; - version = "6.5.0"; - src = fetchurl { - url = "https://registry.npmjs.org/qs/-/qs-6.5.0.tgz"; - sha512 = "fjVFjW9yhqMhVGwRExCXLhJKrLlkYSaxNWdyc9rmHlrVZbk35YHH312dFd7191uQeXkI3mKLZTIbSvIeFwFemg=="; - }; - }; - "qs-6.5.1" = { - name = "qs"; - packageName = "qs"; - version = "6.5.1"; - src = fetchurl { - url = "https://registry.npmjs.org/qs/-/qs-6.5.1.tgz"; - sha512 = "eRzhrN1WSINYCDCbrz796z37LOe3m5tmW7RQf6oBntukAG1nmovJvhnwHHRMAfeoItc1m2Hk02WER2aQ/iqs+A=="; - }; - }; "qs-6.5.2" = { name = "qs"; packageName = "qs"; @@ -26844,13 +27015,13 @@ let sha1 = "9ec61f79049875707d69414596fd907a4d711e73"; }; }; - "quick-format-unescaped-3.0.0" = { + "quick-format-unescaped-3.0.1" = { name = "quick-format-unescaped"; packageName = "quick-format-unescaped"; - version = "3.0.0"; + version = "3.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/quick-format-unescaped/-/quick-format-unescaped-3.0.0.tgz"; - sha512 = "XmIOc07VM2kPm6m3j/U6jgxyUgDm2Rgh2c1PPy0JUHoQRdoh86hOym0bHyF6G1T6sn+N5lildhvl/T59H5KVyA=="; + url = "https://registry.npmjs.org/quick-format-unescaped/-/quick-format-unescaped-3.0.1.tgz"; + sha512 = "Tnk4iJQ8x3V8ml3x9sLIf4tSDaVB9OJY/5gOrnxgK63CXKphhn8oYOPI4tqnXPQcZ3tCv7GFjeoYY5h6UAvuzg=="; }; }; "quick-lru-1.1.0" = { @@ -26889,6 +27060,24 @@ let sha1 = "8ccfd014d0f9608630dd73c19b8e4b057754a6a6"; }; }; + "railroad-diagrams-1.0.0" = { + name = "railroad-diagrams"; + packageName = "railroad-diagrams"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/railroad-diagrams/-/railroad-diagrams-1.0.0.tgz"; + sha1 = "eb7e6267548ddedfb899c1b90e57374559cddb7e"; + }; + }; + "randexp-0.4.6" = { + name = "randexp"; + packageName = "randexp"; + version = "0.4.6"; + src = fetchurl { + url = "https://registry.npmjs.org/randexp/-/randexp-0.4.6.tgz"; + sha512 = "80WNmd9DA0tmZrw9qQa62GPPWfuXJknrmVmLcxvq4uZBdYqb1wYoKTmnlGUchvVWe0XiLupYkBoXVOxz3C8DYQ=="; + }; + }; "random-access-file-2.0.1" = { name = "random-access-file"; packageName = "random-access-file"; @@ -26934,13 +27123,13 @@ let sha1 = "f7d97d92dee6665ec5f6da08c7f963cad4b2ac99"; }; }; - "randomatic-3.1.0" = { + "randomatic-3.1.1" = { name = "randomatic"; packageName = "randomatic"; - version = "3.1.0"; + version = "3.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/randomatic/-/randomatic-3.1.0.tgz"; - sha512 = "KnGPVE0lo2WoXxIZ7cPR8YBpiol4gsSuOwDSg410oHh80ZMp5EiypNqL2K4Z77vJn6lB5rap7IkAmcUlalcnBQ=="; + url = "https://registry.npmjs.org/randomatic/-/randomatic-3.1.1.tgz"; + sha512 = "TuDE5KxZ0J461RVjrJZCJc+J+zCkTb1MbH9AQUq68sMhOMcy9jLcb3BrZKgp9q9Ncltdg4QVqWrH02W2EFFVYw=="; }; }; "randombytes-2.0.6" = { @@ -27042,15 +27231,6 @@ let sha1 = "adfeace2e4fb3098058014d08c072dcc59758774"; }; }; - "raw-body-2.3.2" = { - name = "raw-body"; - packageName = "raw-body"; - version = "2.3.2"; - src = fetchurl { - url = "https://registry.npmjs.org/raw-body/-/raw-body-2.3.2.tgz"; - sha1 = "bcd60c77d3eb93cde0050295c3f379389bc88f89"; - }; - }; "raw-body-2.3.3" = { name = "raw-body"; packageName = "raw-body"; @@ -27060,13 +27240,13 @@ let sha512 = "9esiElv1BrZoI3rCDuOuKCBRbuApGGaDPQfjSflGxdy4oyzqghxu6klEkkVIvBje+FF0BX9coEv8KqW6X/7njw=="; }; }; - "raw-socket-1.6.3" = { + "raw-socket-1.6.4" = { name = "raw-socket"; packageName = "raw-socket"; - version = "1.6.3"; + version = "1.6.4"; src = fetchurl { - url = "https://registry.npmjs.org/raw-socket/-/raw-socket-1.6.3.tgz"; - sha512 = "OcplcSbIIyEZxW6YFsqbvyrUrqvwFNmA4jhA9ZmMhquLrd9VBzIrFRRZ2qaD98UpyVk/VYJLemO8haECHMmEgQ=="; + url = "https://registry.npmjs.org/raw-socket/-/raw-socket-1.6.4.tgz"; + sha512 = "ab/By3tp0gTDzwEJxgKUv+uIma0JFVnJElNMKNAqNiET+GQ2VAfR6eUVfnm0yRG/vxGu8gO2BYWhR30sQOTebg=="; }; }; "rc-0.4.0" = { @@ -27587,7 +27767,7 @@ let packageName = "remark"; version = "3.2.3"; src = fetchurl { - url = "https://registry.npmjs.org/remark/-/remark-3.2.3.tgz"; + url = "http://registry.npmjs.org/remark/-/remark-3.2.3.tgz"; sha1 = "802a38c3aa98c9e1e3ea015eeba211d27cb65e1f"; }; }; @@ -27843,13 +28023,13 @@ let sha1 = "5281770f68e0c9719e5163fd3fab482215f4fda5"; }; }; - "requestretry-3.0.1" = { + "requestretry-3.0.2" = { name = "requestretry"; packageName = "requestretry"; - version = "3.0.1"; + version = "3.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/requestretry/-/requestretry-3.0.1.tgz"; - sha512 = "vJUdB4xucpx+Hc5N1hV44/fHmT4ovhrwGWfG9MtZR6AeO1G350IqPUXJL4gfZND6RtqoSqB+Zs9EeCsMizYf9A=="; + url = "https://registry.npmjs.org/requestretry/-/requestretry-3.0.2.tgz"; + sha512 = "3UXO4EOBwRFXm2AeAElyhM3bmMb57jZi5QC2httyXXSyT49O6o+AdzUZRA/vj5O2tE6xbdpDygRZb5Q19Q7lCA=="; }; }; "require-directory-2.1.1" = { @@ -28055,7 +28235,7 @@ let packageName = "restify"; version = "4.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/restify/-/restify-4.0.3.tgz"; + url = "http://registry.npmjs.org/restify/-/restify-4.0.3.tgz"; sha1 = "e1e5b7ad9d4f6aeacd20e28f44a045f26c146dbc"; }; }; @@ -28284,13 +28464,22 @@ let sha1 = "6f04063a2d04eba3303a1bbc6765eef63037cf3d"; }; }; - "router-1.3.3" = { + "router-2.0.0-alpha.1" = { name = "router"; packageName = "router"; - version = "1.3.3"; + version = "2.0.0-alpha.1"; + src = fetchurl { + url = "https://registry.npmjs.org/router/-/router-2.0.0-alpha.1.tgz"; + sha512 = "fz/T/qLkJM6RTtbqGqA1+uZ88ejqJoPyKeJAeXPYjebA7HzV/UyflH4gXWqW/Y6SERnp4kDwNARjqy6se3PcOw=="; + }; + }; + "rss-parser-3.5.3" = { + name = "rss-parser"; + packageName = "rss-parser"; + version = "3.5.3"; src = fetchurl { - url = "https://registry.npmjs.org/router/-/router-1.3.3.tgz"; - sha1 = "c142f6b5ea4d6b3359022ca95b6580bd217f89cf"; + url = "https://registry.npmjs.org/rss-parser/-/rss-parser-3.5.3.tgz"; + sha512 = "oByqqKTuB6tCg/4UTPXUpJmG4Wr+H72qsBcSnBZM9nH1NhjV8lXzx8uKibN9Sq+mZwwZQyOitjoQvZ/ePsttKA=="; }; }; "rsvp-3.6.2" = { @@ -28469,7 +28658,7 @@ let packageName = "safe-regex"; version = "1.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/safe-regex/-/safe-regex-1.1.0.tgz"; + url = "http://registry.npmjs.org/safe-regex/-/safe-regex-1.1.0.tgz"; sha1 = "40a3669f3b077d1e943d44629e157dd48023bf2e"; }; }; @@ -28590,6 +28779,15 @@ let sha512 = "MuCAyrGZcTLfQoH2XoBlQ8C6bzwN88XT/0slOGz0pn8+gIP85BOAfYa44ZXQUTOwRwPU0QvgU+V+OSajl/59Xg=="; }; }; + "sec-1.0.0" = { + name = "sec"; + packageName = "sec"; + version = "1.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/sec/-/sec-1.0.0.tgz"; + sha1 = "033d60a3ad20ecf2e00940d14f97823465774335"; + }; + }; "secret-handshake-1.1.14" = { name = "secret-handshake"; packageName = "secret-handshake"; @@ -28617,13 +28815,13 @@ let sha1 = "f0c82d98a3b139a8776a8808050b824431087fca"; }; }; - "secure-scuttlebutt-18.5.0" = { + "secure-scuttlebutt-18.6.0" = { name = "secure-scuttlebutt"; packageName = "secure-scuttlebutt"; - version = "18.5.0"; + version = "18.6.0"; src = fetchurl { - url = "https://registry.npmjs.org/secure-scuttlebutt/-/secure-scuttlebutt-18.5.0.tgz"; - sha512 = "b50xp0XAWtd6y4ygw2RRgDxaFNgGqC7XahRt/mC4XhiCe6HoTjpt6j07HVnTDcRtLzNiCPKlFJnYySFTFay2lQ=="; + url = "https://registry.npmjs.org/secure-scuttlebutt/-/secure-scuttlebutt-18.6.0.tgz"; + sha512 = "gKQ8tJVnxd8WJEMusXyVkcHGZHoYB+F+TuQYisFYlhAntqlKBExdN+IT6DjVmHev7DvxE68PVtR8Ijqme93d2w=="; }; }; "seek-bzip-1.0.5" = { @@ -28860,15 +29058,6 @@ let sha1 = "765e7607c8055452bba6f0b052595350986036de"; }; }; - "send-0.15.6" = { - name = "send"; - packageName = "send"; - version = "0.15.6"; - src = fetchurl { - url = "https://registry.npmjs.org/send/-/send-0.15.6.tgz"; - sha1 = "20f23a9c925b762ab82705fe2f9db252ace47e34"; - }; - }; "send-0.16.2" = { name = "send"; packageName = "send"; @@ -28995,15 +29184,6 @@ let sha1 = "ce5a6ecd3101fed5ec09827dac22a9c29bfb0535"; }; }; - "serve-static-1.12.6" = { - name = "serve-static"; - packageName = "serve-static"; - version = "1.12.6"; - src = fetchurl { - url = "https://registry.npmjs.org/serve-static/-/serve-static-1.12.6.tgz"; - sha1 = "b973773f63449934da54e5beba5e31d9f4211577"; - }; - }; "serve-static-1.13.2" = { name = "serve-static"; packageName = "serve-static"; @@ -29085,15 +29265,6 @@ let sha1 = "290cbb232e306942d7d7ea9b83732ab7856f8285"; }; }; - "setprototypeof-1.0.3" = { - name = "setprototypeof"; - packageName = "setprototypeof"; - version = "1.0.3"; - src = fetchurl { - url = "https://registry.npmjs.org/setprototypeof/-/setprototypeof-1.0.3.tgz"; - sha1 = "66567e37043eeb4f04d91bd658c0cbefb55b8e04"; - }; - }; "setprototypeof-1.1.0" = { name = "setprototypeof"; packageName = "setprototypeof"; @@ -29229,13 +29400,13 @@ let sha512 = "vFwSUfQvqybiICwZY5+DAWIPLKsWO31Q91JSKl3UYv+K5c2QRPzn0qzec6QPu1Qc9eHYItiP3NdJqNVqetYAww=="; }; }; - "shortid-2.2.13" = { + "shortid-2.2.14" = { name = "shortid"; packageName = "shortid"; - version = "2.2.13"; + version = "2.2.14"; src = fetchurl { - url = "https://registry.npmjs.org/shortid/-/shortid-2.2.13.tgz"; - sha512 = "dBuNnQGKrJNfjunmXI2X7bl1gnMO4PwbNxrTzO1JvilODmL7WyyCtA+DYxe9XunLXmxmgzFIvKPQ6XRAQrr46Q=="; + url = "https://registry.npmjs.org/shortid/-/shortid-2.2.14.tgz"; + sha512 = "4UnZgr9gDdA1kaKj/38IiudfC3KHKhDc1zi/HSxd9FQDR0VLwH3/y79tZJLsVYPsJgIjeHjqIWaWVRJUj9qZOQ=="; }; }; "shush-1.0.0" = { @@ -29337,13 +29508,13 @@ let sha512 = "Wvre/Jq5vgoz31Z9stYWPLn0PqRqmBDpFSdypAnHu5AvRVCYPRYGnvryNLiXu8GOBNDH82J2FRHUGMjjHUpXFw=="; }; }; - "simple-git-1.105.0" = { + "simple-git-1.107.0" = { name = "simple-git"; packageName = "simple-git"; - version = "1.105.0"; + version = "1.107.0"; src = fetchurl { - url = "https://registry.npmjs.org/simple-git/-/simple-git-1.105.0.tgz"; - sha512 = "ZrGcCPRIKCm6Q8gNJ+gx+leHqaokKpXae6K9lZpVD4sfeA2/rVvxcIR4KVVujNOmA6wHE2xaQ0GQWuIY88o6pA=="; + url = "https://registry.npmjs.org/simple-git/-/simple-git-1.107.0.tgz"; + sha512 = "t4OK1JRlp4ayKRfcW6owrWcRVLyHRUlhGd0uN6ZZTqfDq8a5XpcUdOKiGRNobHEuMtNqzp0vcJNvhYWwh5PsQA=="; }; }; "simple-lru-cache-0.0.2" = { @@ -29531,7 +29702,7 @@ let packageName = "slice-ansi"; version = "0.0.4"; src = fetchurl { - url = "https://registry.npmjs.org/slice-ansi/-/slice-ansi-0.0.4.tgz"; + url = "http://registry.npmjs.org/slice-ansi/-/slice-ansi-0.0.4.tgz"; sha1 = "edbf8903f66f7ce2f8eafd6ceed65e264c831b35"; }; }; @@ -29544,6 +29715,15 @@ let sha512 = "POqxBK6Lb3q6s047D/XsDVNPnF9Dl8JSaqe9h9lURl0OdNqy/ujDrOiIHtsqXMGbWWTIomRzAMaTyawAU//Reg=="; }; }; + "slice-ansi-2.0.0" = { + name = "slice-ansi"; + packageName = "slice-ansi"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/slice-ansi/-/slice-ansi-2.0.0.tgz"; + sha512 = "4j2WTWjp3GsZ+AOagyzVbzp4vWGtZ0hEZ/gDY/uTvm6MTxUfTUIsnMIFb1bn8o0RuXiqUw15H1bue8f22Vw2oQ=="; + }; + }; "sliced-0.0.3" = { name = "sliced"; packageName = "sliced"; @@ -29684,7 +29864,7 @@ let packageName = "sntp"; version = "0.1.4"; src = fetchurl { - url = "https://registry.npmjs.org/sntp/-/sntp-0.1.4.tgz"; + url = "http://registry.npmjs.org/sntp/-/sntp-0.1.4.tgz"; sha1 = "5ef481b951a7b29affdf4afd7f26838fc1120f84"; }; }; @@ -29693,7 +29873,7 @@ let packageName = "sntp"; version = "1.0.9"; src = fetchurl { - url = "https://registry.npmjs.org/sntp/-/sntp-1.0.9.tgz"; + url = "http://registry.npmjs.org/sntp/-/sntp-1.0.9.tgz"; sha1 = "6541184cc90aeea6c6e7b35e2659082443c66198"; }; }; @@ -29706,13 +29886,13 @@ let sha512 = "FL1b58BDrqS3A11lJ0zEdnJ3UOKqVxawAkF3k7F0CVN7VQ34aZrV+G8BZ1WC9ZL7NyrwsW0oviwsWDgRuVYtJg=="; }; }; - "snyk-1.103.4" = { + "snyk-1.108.0" = { name = "snyk"; packageName = "snyk"; - version = "1.103.4"; + version = "1.108.0"; src = fetchurl { - url = "https://registry.npmjs.org/snyk/-/snyk-1.103.4.tgz"; - sha512 = "ynLlsLDjAkzymd0qi1il6f34S4oNTfIgvFCFvkYxvqfBkedfOoDQT4TLU8gi+55MGM6iornf2iefC2FW92BwnQ=="; + url = "https://registry.npmjs.org/snyk/-/snyk-1.108.0.tgz"; + sha512 = "QKeERkklW4DFyd49sqbwZ4xNYXtHOPCcUjNUzDfcvXzNwyxfRKhTf43nmPw6lnIcgBesrY95hMozos4WmgYl3w=="; }; }; "snyk-config-2.2.0" = { @@ -29724,22 +29904,22 @@ let sha512 = "mq0wbP/AgjcmRq5i5jg2akVVV3iSYUPTowZwKn7DChRLDL8ySOzWAwan+ImXiyNbrWo87FNI/15O6MpOnTxOIg=="; }; }; - "snyk-docker-plugin-1.12.0" = { + "snyk-docker-plugin-1.12.1" = { name = "snyk-docker-plugin"; packageName = "snyk-docker-plugin"; - version = "1.12.0"; + version = "1.12.1"; src = fetchurl { - url = "https://registry.npmjs.org/snyk-docker-plugin/-/snyk-docker-plugin-1.12.0.tgz"; - sha512 = "QqKq2bGdnf1L2PNGQrHoqcoaV/PIlJv1qjKIzwA93gfhToKGkgJ31oPXwfef/l9N+ui0Y44c4POBHFbFf8PlJw=="; + url = "https://registry.npmjs.org/snyk-docker-plugin/-/snyk-docker-plugin-1.12.1.tgz"; + sha512 = "9/k+tZORb0CUoE+nFvG+ADc6vzHAkgiGR/7aZ35vxpuc9vW37LFWjmXZAfyoiGNOn1ICrPxSxarah8YsFEwE8Q=="; }; }; - "snyk-go-plugin-1.5.2" = { + "snyk-go-plugin-1.6.0" = { name = "snyk-go-plugin"; packageName = "snyk-go-plugin"; - version = "1.5.2"; + version = "1.6.0"; src = fetchurl { - url = "https://registry.npmjs.org/snyk-go-plugin/-/snyk-go-plugin-1.5.2.tgz"; - sha512 = "XWajcSh6Ld+I+WdcyU3DGDuE2ydThQd8ORkESy0nQ2LwekygLYVYN66OBy0uxpqYfd4qoqeg+J8lb4oGzCmyGA=="; + url = "https://registry.npmjs.org/snyk-go-plugin/-/snyk-go-plugin-1.6.0.tgz"; + sha512 = "E6aYw7XAXSs2wJR3fU+vGQ1lVyjAw8PHIQYQwBwMkTHByhJIWPcu6Hy/jT5LcjJHlhYXlpOuk53HeLVK+kcXrQ=="; }; }; "snyk-gradle-plugin-2.1.0" = { @@ -29751,13 +29931,13 @@ let sha512 = "9gYJluomFZ5kaww5FoBvp4zUIsr27pEJ12jQJaVf0FJ0BmyYHmbCoxvHdqjCSYS2fVtF+fmPnvw0XKQOIwA1SA=="; }; }; - "snyk-module-1.8.2" = { + "snyk-module-1.9.1" = { name = "snyk-module"; packageName = "snyk-module"; - version = "1.8.2"; + version = "1.9.1"; src = fetchurl { - url = "https://registry.npmjs.org/snyk-module/-/snyk-module-1.8.2.tgz"; - sha512 = "XqhdbZ/CUuJ5gSaYdYfapLqx9qm2Mp6nyRMBCLXe9tJSiohOJsc9fQuUDbdOiRCqpA4BD6WLl+qlwOJmJoszBg=="; + url = "https://registry.npmjs.org/snyk-module/-/snyk-module-1.9.1.tgz"; + sha512 = "A+CCyBSa4IKok5uEhqT+hV/35RO6APFNLqk9DRRHg7xW2/j//nPX8wTSZUPF8QeRNEk/sX+6df7M1y6PBHGSHA=="; }; }; "snyk-mvn-plugin-2.0.0" = { @@ -29769,13 +29949,13 @@ let sha512 = "9jAhZhv+7YcqtoQYCYlgMoxK+dWBKlk+wkX27Ebg3vNddNop9q5jZitRXTjsXwfSUZHRt+Ptw1f8vei9kjzZVg=="; }; }; - "snyk-nodejs-lockfile-parser-1.5.3" = { + "snyk-nodejs-lockfile-parser-1.7.0" = { name = "snyk-nodejs-lockfile-parser"; packageName = "snyk-nodejs-lockfile-parser"; - version = "1.5.3"; + version = "1.7.0"; src = fetchurl { - url = "https://registry.npmjs.org/snyk-nodejs-lockfile-parser/-/snyk-nodejs-lockfile-parser-1.5.3.tgz"; - sha512 = "hVUUxRm7f8mN3RdTbeZGJn+w4VMKb7ke4/OB8Qhr4O5S04AMb4YOcsZ80niur05VUykPT32IyFwyGRTBi99WUw=="; + url = "https://registry.npmjs.org/snyk-nodejs-lockfile-parser/-/snyk-nodejs-lockfile-parser-1.7.0.tgz"; + sha512 = "57Gnw8o3HQbheb808GRsofnYPaJCbpt7n+zec+C7J/GZE6GJk+WA2u1EPsNQAsfTLQ3rxBwA1Sonhg498T4COA=="; }; }; "snyk-nuget-plugin-1.6.5" = { @@ -29796,22 +29976,22 @@ let sha512 = "g5QSHBsRJ2O4cNxKC4zlWwnQYiSgQ77Y6QgGmo3ihPX3VLZrc1amaZIpPsNe1jwXirnGj2rvR5Xw+jDjbzvHFw=="; }; }; - "snyk-policy-1.12.0" = { + "snyk-policy-1.13.1" = { name = "snyk-policy"; packageName = "snyk-policy"; - version = "1.12.0"; + version = "1.13.1"; src = fetchurl { - url = "https://registry.npmjs.org/snyk-policy/-/snyk-policy-1.12.0.tgz"; - sha512 = "CEioNnDzccHyid7UIVl3bJ1dnG4co4ofI+KxuC1mo0IUXy64gxnBTeVoZF5gVLWbAyxGxSeW8f0+8GmWMHVb7w=="; + url = "https://registry.npmjs.org/snyk-policy/-/snyk-policy-1.13.1.tgz"; + sha512 = "l9evS3Yk70xyvajjg+I6Ij7fr7gxpVRMZl0J1xNpWps/IVu4DSGih3aMmXi47VJozr4A/eFyj7R1lIr2GhqJCA=="; }; }; - "snyk-python-plugin-1.8.2" = { + "snyk-python-plugin-1.9.0" = { name = "snyk-python-plugin"; packageName = "snyk-python-plugin"; - version = "1.8.2"; + version = "1.9.0"; src = fetchurl { - url = "https://registry.npmjs.org/snyk-python-plugin/-/snyk-python-plugin-1.8.2.tgz"; - sha512 = "LBvjztnXarSHKyhivzM567icOOLOB98I7S9EEnjepuG+EZ0jiZzqOEMVRmzuYi+hRq3Cwh0hhjkwgJAQpKDz+g=="; + url = "https://registry.npmjs.org/snyk-python-plugin/-/snyk-python-plugin-1.9.0.tgz"; + sha512 = "zlyOHoCpmyVym9AwkboeepzEGrY3gHsM7eWP/nJ85TgCnQO5H5orKm3RL57PNbWRY+BnDmoQQ+udQgjym2+3sg=="; }; }; "snyk-resolve-1.0.1" = { @@ -30390,13 +30570,13 @@ let sha512 = "Yg6D3XpRD4kkOmTpdgbUiEJFKghJH03fiC1OPll5h/0sO6neh2jqRDVHOQ4o/LMea0tgCkbMgea5ip/e+MkWyg=="; }; }; - "spdx-license-ids-3.0.1" = { + "spdx-license-ids-3.0.2" = { name = "spdx-license-ids"; packageName = "spdx-license-ids"; - version = "3.0.1"; + version = "3.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/spdx-license-ids/-/spdx-license-ids-3.0.1.tgz"; - sha512 = "TfOfPcYGBB5sDuPn3deByxPhmfegAhpDYKSOXZQN81Oyrrif8ZCodOLzK3AesELnCx03kikhyDwh0pfvvQvF8w=="; + url = "https://registry.npmjs.org/spdx-license-ids/-/spdx-license-ids-3.0.2.tgz"; + sha512 = "qky9CVt0lVIECkEsYbNILVnPvycuEBkXoMFLRWsREkomQLevYhtRKC+R91a5TOAQ3bCMjikRwhyaRqj1VYatYg=="; }; }; "spdy-1.32.5" = { @@ -30543,13 +30723,13 @@ let sha1 = "06cd70795ee58d1462d100a45c660df3179d3b39"; }; }; - "ssb-blobs-1.1.5" = { + "ssb-blobs-1.1.6" = { name = "ssb-blobs"; packageName = "ssb-blobs"; - version = "1.1.5"; + version = "1.1.6"; src = fetchurl { - url = "https://registry.npmjs.org/ssb-blobs/-/ssb-blobs-1.1.5.tgz"; - sha512 = "DeeInkFU8oN1mYlPVrqrm9tupf6wze4HuowK7N2vv/O+UeSLuYPU1p4HrxSqdAPvUabr0OtvbFA6z1T4nw+9fw=="; + url = "https://registry.npmjs.org/ssb-blobs/-/ssb-blobs-1.1.6.tgz"; + sha512 = "/dQIhg19Sk/cnRg25yUFFKhY67eB+Mlx00rK138dCVz3JhKLdmgDbK8kF5Ik/C/DdxDVya3xJZRW0fexwGOAkw=="; }; }; "ssb-client-4.6.0" = { @@ -30561,31 +30741,31 @@ let sha512 = "LyH5Y/U7xvafmAuG1puyhNv4G3Ew9xC67dYgRX0wwbUf5iT422WB1Cvat9qGFAu3/BQbdctXtdEQPxaAn0+hYA=="; }; }; - "ssb-config-2.3.5" = { + "ssb-config-2.3.7" = { name = "ssb-config"; packageName = "ssb-config"; - version = "2.3.5"; + version = "2.3.7"; src = fetchurl { - url = "https://registry.npmjs.org/ssb-config/-/ssb-config-2.3.5.tgz"; - sha512 = "lT30POSTXX6nsACYwMkNto0M74YMoEzLqpSpZqK+AwaRWlNvFqGmjEMwLb5G5jz7deCrXJFo87O3IubiQrwdGg=="; + url = "https://registry.npmjs.org/ssb-config/-/ssb-config-2.3.7.tgz"; + sha512 = "djjLoNpDlE0K/UfhU1mNuJqOy8oJsv/6Q8RLDTHdby2Z+r2MxKRaACH3R9DMZyzgnd3wLjXba5ntNvsuabjx5g=="; }; }; - "ssb-ebt-5.2.3" = { + "ssb-ebt-5.2.7" = { name = "ssb-ebt"; packageName = "ssb-ebt"; - version = "5.2.3"; + version = "5.2.7"; src = fetchurl { - url = "https://registry.npmjs.org/ssb-ebt/-/ssb-ebt-5.2.3.tgz"; - sha512 = "LTIry3qRZRLqv3l97tcd22dNiLjZHz7Ynot0OQFG10zL4jsECSkSxMUqSwrFUTfZEySUxhAx92TDcafDy+/J3A=="; + url = "https://registry.npmjs.org/ssb-ebt/-/ssb-ebt-5.2.7.tgz"; + sha512 = "dLiLRtGMagSKRuOIBQzPDfAQf7LNFR8+g91tKxMPbV6WMENF2bojz3POd75i6BhXJhJx1A6zpO6IrMz3StmtbA=="; }; }; - "ssb-friends-3.1.3" = { + "ssb-friends-3.1.6" = { name = "ssb-friends"; packageName = "ssb-friends"; - version = "3.1.3"; + version = "3.1.6"; src = fetchurl { - url = "https://registry.npmjs.org/ssb-friends/-/ssb-friends-3.1.3.tgz"; - sha512 = "bufgvAcqjAyjKfmh788dr3fV9YYrIgdkIhfETPHidbgIKgx15clNUzjP/s7FZk2PwwrjHyQ54kE0BR2em6u/nQ=="; + url = "https://registry.npmjs.org/ssb-friends/-/ssb-friends-3.1.6.tgz"; + sha512 = "0wKk/MpQ+Xdteso7Ipmgq1AO7m0sAyJjtbEpaAPLR8Mb5uPcK0n/rgGG6nnI6Vl8z1fuhkiqy4BtLQshaSBi/A=="; }; }; "ssb-git-0.5.0" = { @@ -30696,31 +30876,31 @@ let sha512 = "y4OA2MvGl1jU7bUTYsTmMNSqlPt4eh9401THUW1DO4aFyBFEWvpa3eKJHc8aTmaph2hutPPbdKgEFsWDzw26uw=="; }; }; - "ssb-ref-2.12.0" = { + "ssb-ref-2.13.6" = { name = "ssb-ref"; packageName = "ssb-ref"; - version = "2.12.0"; + version = "2.13.6"; src = fetchurl { - url = "https://registry.npmjs.org/ssb-ref/-/ssb-ref-2.12.0.tgz"; - sha512 = "xcVFLYgvWkxZoNDCOQHLqgHYsjmfunVkdby9OPEygjufXbiW6zpnFTBqlqEBojBetxxtVdwCgZreD9kYXED/ZA=="; + url = "https://registry.npmjs.org/ssb-ref/-/ssb-ref-2.13.6.tgz"; + sha512 = "l4mvU4PwXYTWJFhps4g9RkvPAEqJ5klR3oFBEaUqXTHfDzEq2pAn11Np2JqH0CM9JnW/AbK9H+Uzw4aofA9D8A=="; }; }; - "ssb-validate-3.0.11" = { + "ssb-validate-4.0.3" = { name = "ssb-validate"; packageName = "ssb-validate"; - version = "3.0.11"; + version = "4.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/ssb-validate/-/ssb-validate-3.0.11.tgz"; - sha512 = "mZPI9HKZtqPP7Qi26B0GR7HqYmmcELEaoj5zr8TlUcULg9BOZy7f4VSzcKZ36LIkvpuK2sfA6znxIlBLq78fjg=="; + url = "https://registry.npmjs.org/ssb-validate/-/ssb-validate-4.0.3.tgz"; + sha512 = "ee0HgdtRef+dL98sbcEVB7+gnr8u5TqJcQqRdISWyfKcLKv1GXsmXb7VSYVRGveIkbnxHvOWps+XEJzmqqgxHQ=="; }; }; - "ssb-ws-3.0.0" = { + "ssb-ws-3.0.2" = { name = "ssb-ws"; packageName = "ssb-ws"; - version = "3.0.0"; + version = "3.0.2"; src = fetchurl { - url = "https://registry.npmjs.org/ssb-ws/-/ssb-ws-3.0.0.tgz"; - sha512 = "Qna9Oa9+MYhv+Xtqmidb6xww2JZAdO6ZzidJleWbOLJTSV2QkkB7aAFpWdYst/N78ZhThPqT/mdgEmWpaCqTbw=="; + url = "https://registry.npmjs.org/ssb-ws/-/ssb-ws-3.0.2.tgz"; + sha512 = "rQnbFIdzyQrB77y1UD0cWlW/TYO6rqCT1RO95p0ka6UQsEBtm/O7TN8h5AgroD9XqyxdusXhEbhobpUt41s1Cw=="; }; }; "ssh-config-1.1.3" = { @@ -30750,13 +30930,13 @@ let sha1 = "130f5975eddad963f1d56f92b9ac6c51fa9f83eb"; }; }; - "sshpk-1.15.1" = { + "sshpk-1.15.2" = { name = "sshpk"; packageName = "sshpk"; - version = "1.15.1"; + version = "1.15.2"; src = fetchurl { - url = "https://registry.npmjs.org/sshpk/-/sshpk-1.15.1.tgz"; - sha512 = "mSdgNUaidk+dRU5MhYtN9zebdzF2iG0cNPWy8HG+W8y+fT1JnSkh0fzzpjOa0L7P8i1Rscz38t0h4gPcKz43xA=="; + url = "https://registry.npmjs.org/sshpk/-/sshpk-1.15.2.tgz"; + sha512 = "Ra/OXQtuh0/enyl4ETZAfTaeksa6BXks5ZcjpSUNrjBr0DvrJKX+1fsKDPpT9TBXgHAFsa4510aNVgI8g/+SzA=="; }; }; "sshpk-1.7.1" = { @@ -31484,7 +31664,7 @@ let packageName = "strip-eof"; version = "1.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/strip-eof/-/strip-eof-1.0.0.tgz"; + url = "http://registry.npmjs.org/strip-eof/-/strip-eof-1.0.0.tgz"; sha1 = "bb43ff5598a6eb05d89b59fcd129c983313606bf"; }; }; @@ -31962,7 +32142,7 @@ let packageName = "tar"; version = "0.1.17"; src = fetchurl { - url = "https://registry.npmjs.org/tar/-/tar-0.1.17.tgz"; + url = "http://registry.npmjs.org/tar/-/tar-0.1.17.tgz"; sha1 = "408c8a95deb8e78a65b59b1a51a333183a32badc"; }; }; @@ -31971,7 +32151,7 @@ let packageName = "tar"; version = "2.2.1"; src = fetchurl { - url = "https://registry.npmjs.org/tar/-/tar-2.2.1.tgz"; + url = "http://registry.npmjs.org/tar/-/tar-2.2.1.tgz"; sha1 = "8e4d2a256c0e2185c6b18ad694aec968b83cb1d1"; }; }; @@ -31984,13 +32164,13 @@ let sha512 = "pQNFsg+Wb6VXsrIPUnuQwrHR4wD5ASBR0jRyiT4/AALFA2Nl+CjhkDX5fTmIwCuULRtyQR3Dae2BBnP2EFHscw=="; }; }; - "tar-4.4.6" = { + "tar-4.4.7" = { name = "tar"; packageName = "tar"; - version = "4.4.6"; + version = "4.4.7"; src = fetchurl { - url = "https://registry.npmjs.org/tar/-/tar-4.4.6.tgz"; - sha512 = "tMkTnh9EdzxyfW+6GK6fCahagXsnYk6kE6S9Gr9pjVdys769+laCTbodXDhPAjzVtEBazRgP0gYqOjnk9dQzLg=="; + url = "https://registry.npmjs.org/tar/-/tar-4.4.7.tgz"; + sha512 = "mR3MzsCdN0IEWjZRuF/J9gaWHnTwOvzjqPTcvi1xXgfKTDQRp39gRETPQEfPByAdEOGmZfx1HrRsn8estaEvtA=="; }; }; "tar-fs-1.16.3" = { @@ -32020,6 +32200,24 @@ let sha512 = "rzS0heiNf8Xn7/mpdSVVSMAWAoy9bfb1WOTYC78Z0UQKeKa/CWS8FOq0lKGNa8DWKAn9gxjCvMLYc5PGXYlK2A=="; }; }; + "taskkill-2.0.0" = { + name = "taskkill"; + packageName = "taskkill"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/taskkill/-/taskkill-2.0.0.tgz"; + sha1 = "a354305702a964357033027aa949eaed5331b784"; + }; + }; + "tasklist-3.1.1" = { + name = "tasklist"; + packageName = "tasklist"; + version = "3.1.1"; + src = fetchurl { + url = "https://registry.npmjs.org/tasklist/-/tasklist-3.1.1.tgz"; + sha512 = "G3I7QWUBSNWaekrJcDabydF6dcvy+vZ2PrX04JYq1p914TOLgpN+ryMtheGavs1LYVevTbTmwjQY8aeX8yLsyA=="; + }; + }; "temp-0.6.0" = { name = "temp"; packageName = "temp"; @@ -32277,17 +32475,17 @@ let packageName = "thunky"; version = "0.1.0"; src = fetchurl { - url = "https://registry.npmjs.org/thunky/-/thunky-0.1.0.tgz"; + url = "http://registry.npmjs.org/thunky/-/thunky-0.1.0.tgz"; sha1 = "bf30146824e2b6e67b0f2d7a4ac8beb26908684e"; }; }; - "thunky-1.0.2" = { + "thunky-1.0.3" = { name = "thunky"; packageName = "thunky"; - version = "1.0.2"; + version = "1.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/thunky/-/thunky-1.0.2.tgz"; - sha1 = "a862e018e3fb1ea2ec3fce5d55605cf57f247371"; + url = "https://registry.npmjs.org/thunky/-/thunky-1.0.3.tgz"; + sha512 = "YwT8pjmNcAXBZqrubu22P4FYsh2D4dxRmnWBOL8Jk8bUcRUtc5326kx32tuTmFDAZtLOGEVNl8POAR8j896Iow=="; }; }; "tildify-1.2.0" = { @@ -32434,6 +32632,15 @@ let sha512 = "jRCJlojKnZ3addtTOjdIqoRuPEKBvNXcGYqzO6zWZX8KfKEpnGY5jfggJQ3EjKuu8D4bJRr0y+cYJFmYbImXGw=="; }; }; + "tmp-graphql-config-extension-openapi-1.0.7" = { + name = "tmp-graphql-config-extension-openapi"; + packageName = "tmp-graphql-config-extension-openapi"; + version = "1.0.7"; + src = fetchurl { + url = "https://registry.npmjs.org/tmp-graphql-config-extension-openapi/-/tmp-graphql-config-extension-openapi-1.0.7.tgz"; + sha512 = "NQPUaywaVC2hzWkBBsTX3sV2XfxU0mc409rJyrA7iCu5DSTjMLUqI+U4KJVSy/Ltp0zgbWMWua471R7zMql9Pw=="; + }; + }; "to-absolute-glob-2.0.2" = { name = "to-absolute-glob"; packageName = "to-absolute-glob"; @@ -32547,7 +32754,7 @@ let packageName = "to-vfile"; version = "1.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/to-vfile/-/to-vfile-1.0.0.tgz"; + url = "http://registry.npmjs.org/to-vfile/-/to-vfile-1.0.0.tgz"; sha1 = "88defecd43adb2ef598625f0e3d59f7f342941ba"; }; }; @@ -32587,13 +32794,13 @@ let sha512 = "O7L5hhSQHxuufWUdcTRPfuTh3phKfAZ/dqfxZFoxPCj2RYmpaSGLEIs016FCXItQwNr08yefUB5TSjzRYnajTA=="; }; }; - "topo-3.0.0" = { + "topo-3.0.3" = { name = "topo"; packageName = "topo"; - version = "3.0.0"; + version = "3.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/topo/-/topo-3.0.0.tgz"; - sha512 = "Tlu1fGlR90iCdIPURqPiufqAlCZYzLjHYVVbcFWDMcX7+tK8hdZWAfsMrD/pBul9jqHHwFjNdf1WaxA9vTRRhw=="; + url = "https://registry.npmjs.org/topo/-/topo-3.0.3.tgz"; + sha512 = "IgpPtvD4kjrJ7CRA3ov2FhWQADwv+Tdqbsf1ZnPUSAtCJ9e1Z44MmoSGDXGk4IppoZA7jd/QRkNddlLJWlUZsQ=="; }; }; "torrent-discovery-5.4.0" = { @@ -32785,6 +32992,15 @@ let sha512 = "DlX6dR0lOIRDFxI0mjL9IYg6OTncLm/Zt+JiBhE5OlFcAR8yc9S7FFXU9so0oda47frdM/JFsk7UjNt9vscKcg=="; }; }; + "tree-kill-1.2.1" = { + name = "tree-kill"; + packageName = "tree-kill"; + version = "1.2.1"; + src = fetchurl { + url = "https://registry.npmjs.org/tree-kill/-/tree-kill-1.2.1.tgz"; + sha512 = "4hjqbObwlh2dLyW4tcz0Ymw0ggoaVDMveUB9w8kFSQScdRLo0gxO9J7WFcUBo+W3C1TLdFIEwNOWebgZZ0RH9Q=="; + }; + }; "trim-0.0.1" = { name = "trim"; packageName = "trim"; @@ -33100,13 +33316,13 @@ let sha512 = "kk80vLW9iGtjMnIv11qyxLqZm20UklzuR2tL0QAnDIygIUIemcZMxlMWudl9OOt76H3ntVzcTiddQ1/pAAJMYg=="; }; }; - "typescript-3.1.3" = { + "typescript-3.1.6" = { name = "typescript"; packageName = "typescript"; - version = "3.1.3"; + version = "3.1.6"; src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-3.1.3.tgz"; - sha512 = "+81MUSyX+BaSo+u2RbozuQk/UWx6hfG0a5gHu4ANEM4sU96XbuIyAB+rWBW1u70c6a5QuZfuYICn3s2UjuHUpA=="; + url = "https://registry.npmjs.org/typescript/-/typescript-3.1.6.tgz"; + sha512 = "tDMYfVtvpb96msS1lDX9MEdHrW4yOuZ4Kdc4Him9oU796XldPYF/t2+uKoX0BBa0hXXwDlqYQbXY5Rzjzc5hBA=="; }; }; "typewise-1.0.3" = { @@ -33501,7 +33717,7 @@ let packageName = "unified"; version = "2.1.4"; src = fetchurl { - url = "https://registry.npmjs.org/unified/-/unified-2.1.4.tgz"; + url = "http://registry.npmjs.org/unified/-/unified-2.1.4.tgz"; sha1 = "14bc6cd40d98ffff75b405506bad873ecbbac3ba"; }; }; @@ -33739,6 +33955,15 @@ let sha1 = "d2f0f737d16b0615e72a6935ed04214572d56f97"; }; }; + "unzipper-0.9.4" = { + name = "unzipper"; + packageName = "unzipper"; + version = "0.9.4"; + src = fetchurl { + url = "https://registry.npmjs.org/unzipper/-/unzipper-0.9.4.tgz"; + sha512 = "kGrkTaphmXE+0/A5Q7rwcm/xHlDkXDOGEh6wuiN3SUQsyVWd7V51rwqttlNTT91JrLkfn34MoBNf38unF0vhRw=="; + }; + }; "upath-1.1.0" = { name = "upath"; packageName = "upath"; @@ -33987,7 +34212,7 @@ let packageName = "utf8"; version = "2.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/utf8/-/utf8-2.0.0.tgz"; + url = "http://registry.npmjs.org/utf8/-/utf8-2.0.0.tgz"; sha1 = "79ce59eced874809cab9a71fc7102c7d45d4118d"; }; }; @@ -34014,7 +34239,7 @@ let packageName = "util"; version = "0.10.3"; src = fetchurl { - url = "https://registry.npmjs.org/util/-/util-0.10.3.tgz"; + url = "http://registry.npmjs.org/util/-/util-0.10.3.tgz"; sha1 = "7afb1afe50805246489e3db7fe0ed379336ac0f9"; }; }; @@ -34032,7 +34257,7 @@ let packageName = "util"; version = "0.4.9"; src = fetchurl { - url = "https://registry.npmjs.org/util/-/util-0.4.9.tgz"; + url = "http://registry.npmjs.org/util/-/util-0.4.9.tgz"; sha1 = "d95d5830d2328ec17dee3c80bfc50c33562b75a3"; }; }; @@ -34198,15 +34423,6 @@ let sha1 = "aab1a1fa30d45f88dd321148875ac02c0b55e5b4"; }; }; - "v8flags-3.0.2" = { - name = "v8flags"; - packageName = "v8flags"; - version = "3.0.2"; - src = fetchurl { - url = "https://registry.npmjs.org/v8flags/-/v8flags-3.0.2.tgz"; - sha512 = "6sgSKoFw1UpUPd3cFdF7QGnrH6tDeBgW1F3v9gy8gLY0mlbiBXq8soy8aQpY6xeeCjH5K+JvC62Acp7gtl7wWA=="; - }; - }; "v8flags-3.1.1" = { name = "v8flags"; packageName = "v8flags"; @@ -34419,7 +34635,7 @@ let packageName = "vfile"; version = "1.4.0"; src = fetchurl { - url = "https://registry.npmjs.org/vfile/-/vfile-1.4.0.tgz"; + url = "http://registry.npmjs.org/vfile/-/vfile-1.4.0.tgz"; sha1 = "c0fd6fa484f8debdb771f68c31ed75d88da97fe7"; }; }; @@ -34428,7 +34644,7 @@ let packageName = "vfile-find-down"; version = "1.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/vfile-find-down/-/vfile-find-down-1.0.0.tgz"; + url = "http://registry.npmjs.org/vfile-find-down/-/vfile-find-down-1.0.0.tgz"; sha1 = "84a4d66d03513f6140a84e0776ef0848d4f0ad95"; }; }; @@ -34437,7 +34653,7 @@ let packageName = "vfile-find-up"; version = "1.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/vfile-find-up/-/vfile-find-up-1.0.0.tgz"; + url = "http://registry.npmjs.org/vfile-find-up/-/vfile-find-up-1.0.0.tgz"; sha1 = "5604da6fe453b34350637984eb5fe4909e280390"; }; }; @@ -34446,7 +34662,7 @@ let packageName = "vfile-reporter"; version = "1.5.0"; src = fetchurl { - url = "https://registry.npmjs.org/vfile-reporter/-/vfile-reporter-1.5.0.tgz"; + url = "http://registry.npmjs.org/vfile-reporter/-/vfile-reporter-1.5.0.tgz"; sha1 = "21a7009bfe55e24df8ff432aa5bf6f6efa74e418"; }; }; @@ -34455,7 +34671,7 @@ let packageName = "vfile-sort"; version = "1.0.0"; src = fetchurl { - url = "https://registry.npmjs.org/vfile-sort/-/vfile-sort-1.0.0.tgz"; + url = "http://registry.npmjs.org/vfile-sort/-/vfile-sort-1.0.0.tgz"; sha1 = "17ee491ba43e8951bb22913fcff32a7dc4d234d4"; }; }; @@ -34720,13 +34936,13 @@ let sha1 = "13587190f34e72ba7a07ebbaa7e70ac147b1fb7d"; }; }; - "vue-cli-plugin-apollo-0.16.6" = { + "vue-cli-plugin-apollo-0.17.3" = { name = "vue-cli-plugin-apollo"; packageName = "vue-cli-plugin-apollo"; - version = "0.16.6"; + version = "0.17.3"; src = fetchurl { - url = "https://registry.npmjs.org/vue-cli-plugin-apollo/-/vue-cli-plugin-apollo-0.16.6.tgz"; - sha512 = "2GFJQg84BrdgLZXkvwxndlAljOvPOhoNVXrVChSTpiOgEu5JqPkVn71fAeVZ/OYzlcs+48trQQ32SXoHrJyQ0A=="; + url = "https://registry.npmjs.org/vue-cli-plugin-apollo/-/vue-cli-plugin-apollo-0.17.3.tgz"; + sha512 = "IMKGkmwVAF8uAy5ngbE0XYze6i9PGSAnByqvVgLgT4YsjUHMwfyUoyVJuAtfJPZG2G+fVpcwArhBhucAWXbSXw=="; }; }; "walk-2.3.14" = { @@ -34801,13 +35017,13 @@ let sha1 = "79691584d98607f5070bd3b70a40e6bb22e401eb"; }; }; - "webassemblyjs-1.7.8" = { + "webassemblyjs-1.7.11" = { name = "webassemblyjs"; packageName = "webassemblyjs"; - version = "1.7.8"; + version = "1.7.11"; src = fetchurl { - url = "https://registry.npmjs.org/webassemblyjs/-/webassemblyjs-1.7.8.tgz"; - sha512 = "7J64n2yTf2apgtRJypiHUFNRc2twQrMAFIWsm8u4qih7nG+sry2Bna1zq3qFI35fazIF1m42VGHHvdp9bBXmBA=="; + url = "https://registry.npmjs.org/webassemblyjs/-/webassemblyjs-1.7.11.tgz"; + sha512 = "vTwNncSEfuE51O1yHdcsino4LN1SYCiI4ws9OU1cImsqJ3vsydceDtzPcYXPFHm6Tie1ZH0HobXpYFExjronYw=="; }; }; "webidl-conversions-2.0.1" = { @@ -34999,13 +35215,13 @@ let sha512 = "QGkOQc8XL6Bt5PwnsExKBPuMKBxnGxWWW3fU55Xt4feHozMUhdUMaBCk290qpm/wG5u/RSKzwdAC4i51YigihA=="; }; }; - "widest-line-2.0.0" = { + "widest-line-2.0.1" = { name = "widest-line"; packageName = "widest-line"; - version = "2.0.0"; + version = "2.0.1"; src = fetchurl { - url = "https://registry.npmjs.org/widest-line/-/widest-line-2.0.0.tgz"; - sha1 = "0142a4e8a243f8882c0233aa0e0281aa76152273"; + url = "https://registry.npmjs.org/widest-line/-/widest-line-2.0.1.tgz"; + sha512 = "Ba5m9/Fa4Xt9eb2ELXt77JxVDV8w7qQrH0zS/TWSJdLyAwQjWoOzpzj5lwVftDz6n/EOu3tNACS84v509qwnJA=="; }; }; "win-detect-browsers-1.0.2" = { @@ -35990,13 +36206,13 @@ let sha512 = "/KbouQdKgnqxG6K3Tc8VBPAQLPbruQ7KkbinwR+ah507oOFobHnGs8kqj8oMfafY6rXInHdh7nC5YzicCR4Z0g=="; }; }; - "yeoman-environment-2.3.3" = { + "yeoman-environment-2.3.4" = { name = "yeoman-environment"; packageName = "yeoman-environment"; - version = "2.3.3"; + version = "2.3.4"; src = fetchurl { - url = "https://registry.npmjs.org/yeoman-environment/-/yeoman-environment-2.3.3.tgz"; - sha512 = "HBpXdNw8V66EwqIFt01rNhSgX33BOzgVb9CxpIvESvCI4ELeOSniB6gV6RXwrBur8kmHZCIAkYQYpib7Qxx8FQ=="; + url = "https://registry.npmjs.org/yeoman-environment/-/yeoman-environment-2.3.4.tgz"; + sha512 = "KLxE5ft/74Qj7h3AsQZv8G6MEEHYJwmD5F99nfOVaep3rBzCtbrJKkdqWc7bDV141Nr8UZZsIXmzc3IcCm6E2w=="; }; }; "yn-2.0.0" = { @@ -36035,13 +36251,13 @@ let sha512 = "Dhp/R0pqSHj3vPs5O1gVd9kZx5Iew2lqVcfJQOBHx3llM/dLea8vl9wSa9FK8wLdSBQJ6mmgKi9+Rk2DRH3i9Q=="; }; }; - "zen-observable-0.8.9" = { + "zen-observable-0.8.11" = { name = "zen-observable"; packageName = "zen-observable"; - version = "0.8.9"; + version = "0.8.11"; src = fetchurl { - url = "https://registry.npmjs.org/zen-observable/-/zen-observable-0.8.9.tgz"; - sha512 = "Y9kPzjGvIZ5jchSlqlCpBW3I82zBBL4z+ulXDRVA1NwsKzjt5kwAi+gOYIy0htNkfuehGZZtP5mRXHRV6TjDWw=="; + url = "https://registry.npmjs.org/zen-observable/-/zen-observable-0.8.11.tgz"; + sha512 = "N3xXQVr4L61rZvGMpWe8XoCGX8vhU35dPyQ4fm5CY/KDlG0F75un14hjbckPXTDuKUY6V0dqR2giT6xN8Y4GEQ=="; }; }; "zen-observable-ts-0.8.10" = { @@ -36113,10 +36329,10 @@ in alloy = nodeEnv.buildNodePackage { name = "alloy"; packageName = "alloy"; - version = "1.13.3"; + version = "1.13.4"; src = fetchurl { - url = "https://registry.npmjs.org/alloy/-/alloy-1.13.3.tgz"; - sha512 = "IU15/1dufp+iI9FmXshIo9z9x4HmDk5Wslo2VkHlA1k8pYzHQ3XapRflDkEdV1tZ9LXTEMJW40t8mnWLjZjDqg=="; + url = "https://registry.npmjs.org/alloy/-/alloy-1.13.4.tgz"; + sha512 = "EjH9edCzDZzUFj5Cko6Za/nd9pQsxwL/kza+EI8sfH0UFA8YYuFBriOITnE/T9E4bJC3kEJEakGKaag0CcGWbw=="; }; dependencies = [ sources."JSV-4.0.2" @@ -36171,7 +36387,7 @@ in ]; }) sources."globals-9.18.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-ansi-2.0.0" sources."has-color-0.1.7" sources."home-or-tmp-2.0.0" @@ -36283,16 +36499,12 @@ in sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fs-extra-0.26.7" sources."fs.realpath-1.0.0" sources."getpass-0.1.7" sources."glob-6.0.4" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" sources."http-signature-1.2.0" @@ -36308,8 +36520,8 @@ in sources."jsonfile-2.4.0" sources."jsprim-1.4.1" sources."klaw-1.3.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -36334,7 +36546,7 @@ in }) sources."safe-buffer-5.1.2" sources."safer-buffer-2.1.2" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."string_decoder-0.10.31" sources."tmp-0.0.28" (sources."touch-0.0.3" // { @@ -36368,7 +36580,7 @@ in sha512 = "MMiK5sFfIocNMWCc5PshUCAe6aY4P13/GCmSwudOziA/pFdQMHU8jhu+jU2SSWFug4K1ugeuCwtMXe43oL0PhQ=="; }; dependencies = [ - sources."@types/node-8.10.36" + sources."@types/node-8.10.37" sources."JSV-4.0.2" sources."adal-node-0.1.28" sources."ajv-5.5.2" @@ -36431,11 +36643,11 @@ in sources."request-2.74.0" ]; }) - sources."azure-arm-resource-7.0.0" + sources."azure-arm-resource-7.0.1" sources."azure-arm-servermanagement-1.1.0" sources."azure-arm-storage-5.2.0" sources."azure-arm-trafficmanager-1.1.0-preview" - sources."azure-arm-website-5.3.0" + sources."azure-arm-website-5.5.0" sources."azure-asm-compute-0.18.0" sources."azure-asm-hdinsight-0.10.2" sources."azure-asm-mgmt-0.10.1" @@ -36470,13 +36682,13 @@ in ]; }) sources."azure-servicefabric-2.0.0" - (sources."azure-storage-2.10.1" // { + (sources."azure-storage-2.10.2" // { dependencies = [ - sources."extend-1.2.1" sources."readable-stream-2.0.6" sources."underscore-1.8.3" sources."validator-9.4.1" sources."xml2js-0.2.8" + sources."xmlbuilder-9.0.7" ]; }) sources."balanced-match-1.0.0" @@ -36607,8 +36819,8 @@ in sources."lodash-4.17.11" sources."map-stream-0.1.0" sources."md5.js-1.3.4" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -36675,11 +36887,7 @@ in sources."assert-plus-1.0.0" sources."aws-sign2-0.7.0" sources."caseless-0.12.0" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."har-validator-5.1.0" sources."http-signature-1.2.0" sources."oauth-sign-0.9.0" @@ -36701,7 +36909,7 @@ in sources."asn1-0.1.11" ]; }) - (sources."sshpk-1.15.1" // { + (sources."sshpk-1.15.2" // { dependencies = [ sources."assert-plus-1.0.0" ]; @@ -36762,6 +36970,76 @@ in production = true; bypassCache = true; }; + azure-functions-core-tools = nodeEnv.buildNodePackage { + name = "azure-functions-core-tools"; + packageName = "azure-functions-core-tools"; + version = "2.1.748"; + src = fetchurl { + url = "https://registry.npmjs.org/azure-functions-core-tools/-/azure-functions-core-tools-2.1.748.tgz"; + sha512 = "Zi4/o7479cSZ0Ln5Ygf2FPdN5G2uXOOnoPG/8GGBQkdCkOtYECiOy5Py4A21MHJ/XvfIY4cRH7EVkbzZN5Cwwg=="; + }; + dependencies = [ + sources."agent-base-4.2.1" + sources."ansi-styles-3.2.1" + sources."balanced-match-1.0.0" + sources."big-integer-1.6.36" + sources."binary-0.3.0" + sources."bluebird-3.4.7" + sources."brace-expansion-1.1.11" + sources."buffer-indexof-polyfill-1.0.1" + sources."buffers-0.1.1" + sources."chainsaw-0.1.0" + sources."chalk-2.4.1" + sources."color-convert-1.9.3" + sources."color-name-1.1.3" + sources."command-exists-1.2.8" + sources."concat-map-0.0.1" + sources."core-util-is-1.0.2" + sources."debug-3.2.6" + sources."duplexer2-0.1.4" + sources."es6-promise-4.2.5" + sources."es6-promisify-5.0.0" + sources."escape-string-regexp-1.0.5" + sources."fs.realpath-1.0.0" + sources."fstream-1.0.11" + sources."glob-7.1.3" + sources."graceful-fs-4.1.15" + sources."has-flag-3.0.0" + sources."https-proxy-agent-2.2.1" + sources."inflight-1.0.6" + sources."inherits-2.0.3" + sources."isarray-1.0.0" + sources."listenercount-1.0.1" + sources."minimatch-3.0.4" + sources."minimist-0.0.8" + sources."mkdirp-0.5.1" + sources."ms-2.1.1" + sources."once-1.4.0" + sources."os-tmpdir-1.0.2" + sources."path-is-absolute-1.0.1" + sources."process-nextick-args-2.0.0" + sources."progress-2.0.1" + sources."readable-stream-2.3.6" + sources."rimraf-2.6.2" + sources."safe-buffer-5.1.2" + sources."setimmediate-1.0.5" + sources."string_decoder-1.1.1" + sources."supports-color-5.5.0" + sources."tmp-0.0.33" + sources."traverse-0.3.9" + sources."unzipper-0.9.4" + sources."util-deprecate-1.0.2" + sources."wrappy-1.0.2" + ]; + buildInputs = globalBuildInputs; + meta = { + description = "Azure Functions Core Tools"; + homepage = "https://github.com/Azure/azure-functions-core-tools#readme"; + license = "MIT"; + }; + production = true; + bypassCache = true; + }; bower = nodeEnv.buildNodePackage { name = "bower"; packageName = "bower"; @@ -36811,7 +37089,7 @@ in sources."find-up-1.1.2" (sources."fs-extra-0.26.7" // { dependencies = [ - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" ]; }) sources."fs.realpath-1.0.0" @@ -36830,24 +37108,24 @@ in sources."is-utf8-0.2.1" (sources."jsonfile-2.4.0" // { dependencies = [ - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" ]; }) (sources."klaw-1.3.1" // { dependencies = [ - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" ]; }) (sources."load-json-file-1.1.0" // { dependencies = [ - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" ]; }) sources."lodash-4.2.1" sources."loud-rejection-1.6.0" sources."map-obj-1.0.1" sources."meow-3.7.0" - sources."mime-db-1.36.0" + sources."mime-db-1.37.0" sources."minimatch-3.0.4" sources."minimist-1.2.0" (sources."mkdirp-0.5.1" // { @@ -36867,7 +37145,7 @@ in sources."path-is-absolute-1.0.1" (sources."path-type-1.1.0" // { dependencies = [ - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" ]; }) sources."pify-2.3.0" @@ -36891,7 +37169,7 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" + sources."spdx-license-ids-3.0.2" sources."sprintf-js-1.0.3" sources."strip-bom-2.0.0" sources."strip-indent-1.0.1" @@ -36923,8 +37201,9 @@ in }; dependencies = [ sources."JSONStream-1.3.5" - sources."acorn-6.0.2" - sources."acorn-node-1.6.0" + sources."acorn-6.0.4" + sources."acorn-dynamic-import-4.0.0" + sources."acorn-node-1.6.2" sources."acorn-walk-6.1.0" sources."array-filter-0.0.1" sources."array-map-0.0.0" @@ -37197,7 +37476,7 @@ in dependencies = [ sources."minimist-0.0.8" sources."mkdirp-0.5.1" - sources."thunky-1.0.2" + sources."thunky-1.0.3" ]; }) sources."fs.realpath-1.0.0" @@ -37205,7 +37484,7 @@ in sources."get-stdin-4.0.1" sources."glob-7.1.3" sources."got-1.2.2" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-ansi-1.0.3" sources."hat-0.0.3" sources."hawk-0.10.2" @@ -37397,7 +37676,7 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" + sources."spdx-license-ids-3.0.2" sources."speedometer-0.1.4" sources."srt2vtt-1.3.1" sources."stream-transcoder-0.0.5" @@ -37626,9 +37905,10 @@ in sources."abbrev-1.1.1" sources."accepts-1.3.5" sources."acorn-5.7.3" - (sources."acorn-node-1.6.0" // { + sources."acorn-dynamic-import-4.0.0" + (sources."acorn-node-1.6.2" // { dependencies = [ - sources."acorn-6.0.2" + sources."acorn-6.0.4" ]; }) sources."acorn-walk-6.1.0" @@ -37820,11 +38100,7 @@ in sources."finalhandler-1.1.1" sources."foreach-2.0.5" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."forwarded-0.1.2" sources."fresh-0.5.2" sources."fs.realpath-1.0.0" @@ -37836,7 +38112,7 @@ in sources."glob-5.0.15" sources."global-dirs-0.1.1" sources."got-6.7.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" sources."has-1.0.3" @@ -37930,8 +38206,8 @@ in sources."methods-1.1.2" sources."miller-rabin-4.0.1" sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimalistic-assert-1.0.1" sources."minimalistic-crypto-utils-1.0.1" sources."minimatch-3.0.4" @@ -38064,8 +38340,8 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" - sources."sshpk-1.15.1" + sources."spdx-license-ids-3.0.2" + sources."sshpk-1.15.2" sources."statuses-1.4.0" sources."stream-browserify-2.0.1" sources."stream-buffers-2.2.0" @@ -38131,7 +38407,7 @@ in sources."verror-1.10.0" sources."vm-browserify-0.0.4" sources."which-1.3.1" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" sources."win-release-1.1.1" sources."wrappy-1.0.2" sources."write-file-atomic-2.3.0" @@ -38174,7 +38450,7 @@ in sources."@cycle/run-3.4.0" sources."@cycle/time-0.10.1" sources."@types/cookiejar-2.1.0" - sources."@types/node-10.11.7" + sources."@types/node-10.12.2" sources."@types/superagent-3.8.2" sources."ansi-escapes-3.1.0" sources."ansi-regex-2.1.1" @@ -38192,7 +38468,7 @@ in sources."color-convert-1.9.3" sources."color-name-1.1.3" sources."combine-errors-3.0.3" - sources."combined-stream-1.0.6" + sources."combined-stream-1.0.7" sources."component-emitter-1.2.1" sources."cookiejar-2.1.2" sources."core-util-is-1.0.2" @@ -38213,7 +38489,7 @@ in sources."extend-3.0.2" sources."external-editor-2.2.0" sources."figures-2.0.0" - sources."form-data-2.3.2" + sources."form-data-2.3.3" sources."formidable-1.2.1" sources."has-ansi-2.0.0" sources."has-flag-3.0.0" @@ -38240,8 +38516,8 @@ in sources."lru-cache-4.1.3" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."minimist-1.2.0" sources."ms-2.1.1" @@ -38305,10 +38581,10 @@ in create-react-app = nodeEnv.buildNodePackage { name = "create-react-app"; packageName = "create-react-app"; - version = "2.0.4"; + version = "2.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/create-react-app/-/create-react-app-2.0.4.tgz"; - sha512 = "8FP0i8GNAVADIH6zc1INmpkxDZADi+wWNOveq/ja/vjpkfgXcHd0bglNC5mg03cVmJUZWm/Am9qNY1IsUW+PGQ=="; + url = "https://registry.npmjs.org/create-react-app/-/create-react-app-2.1.1.tgz"; + sha512 = "ZCDwk0joko6JqKscWEaNPs32GyxVQZOIXxa7KmzZwnxiUyWfsWoiXfbivK5KyPnUT8AYztexCH9VI0tBTiqlsg=="; }; dependencies = [ sources."ansi-regex-2.1.1" @@ -38332,7 +38608,7 @@ in sources."fstream-1.0.11" sources."fstream-ignore-1.0.5" sources."glob-7.1.3" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-ansi-2.0.0" sources."hyperquest-2.1.3" sources."inflight-1.0.6" @@ -38407,7 +38683,7 @@ in sources."cross-spawn-5.1.0" sources."escape-string-regexp-1.0.5" sources."fs-extra-4.0.3" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-flag-3.0.0" sources."isexe-2.0.0" sources."jsonfile-4.0.0" @@ -38618,11 +38894,7 @@ in sources."for-in-1.0.2" sources."for-own-0.1.5" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."from2-2.3.0" sources."fs.realpath-1.0.0" sources."get-stream-3.0.0" @@ -38633,7 +38905,7 @@ in sources."global-4.3.2" sources."global-dirs-0.1.1" sources."got-6.7.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" sources."has-flag-3.0.0" @@ -38722,8 +38994,8 @@ in sources."merkle-tree-stream-3.0.3" sources."micromatch-2.3.11" sources."mime-2.3.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."min-document-2.19.0" sources."minimatch-3.0.4" sources."minimist-1.2.0" @@ -38742,7 +39014,7 @@ in sources."mutexify-1.2.0" sources."nan-2.11.1" sources."nanoassert-1.1.0" - sources."nanobus-4.3.4" + sources."nanobus-4.3.5" sources."nanoscheduler-1.0.3" sources."nanotiming-7.3.1" sources."ncp-1.0.1" @@ -38790,7 +39062,7 @@ in sources."random-access-file-2.0.1" sources."random-access-memory-3.0.0" sources."random-access-storage-1.3.0" - (sources."randomatic-3.1.0" // { + (sources."randomatic-3.1.1" // { dependencies = [ sources."is-number-4.0.0" sources."kind-of-6.0.2" @@ -38835,7 +39107,7 @@ in sources."sorted-indexof-1.0.0" sources."sparse-bitfield-3.0.3" sources."speedometer-1.1.0" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."stack-trace-0.0.10" sources."stream-collector-1.0.1" sources."stream-each-1.2.3" @@ -38858,7 +39130,7 @@ in sources."supports-color-5.5.0" sources."term-size-1.2.0" sources."throttle-1.0.3" - sources."thunky-1.0.2" + sources."thunky-1.0.3" sources."timed-out-4.0.1" sources."to-buffer-1.1.1" (sources."toiletdb-1.4.1" // { @@ -38889,7 +39161,7 @@ in sources."varint-3.0.1" sources."verror-1.10.0" sources."which-1.3.1" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" (sources."winston-2.1.1" // { dependencies = [ sources."async-1.0.0" @@ -38985,7 +39257,7 @@ in sources."fresh-0.2.4" sources."from-0.1.7" sources."hiredis-0.4.1" - sources."http-parser-js-0.4.13" + sources."http-parser-js-0.5.0" sources."inherits-2.0.3" sources."ini-1.3.5" sources."ipaddr.js-1.0.5" @@ -39004,8 +39276,8 @@ in sources."merge-descriptors-0.0.2" sources."methods-1.1.2" sources."mime-1.2.11" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimist-0.0.10" sources."ms-0.7.0" sources."nan-2.11.1" @@ -39105,7 +39377,7 @@ in sources."bytewise-core-1.2.3" sources."cookie-signature-1.1.0" sources."core-util-is-1.0.2" - sources."cors-2.8.4" + sources."cors-2.8.5" sources."deferred-leveldown-0.2.0" sources."docker-parse-image-3.0.1" (sources."duplexify-3.6.1" // { @@ -39258,7 +39530,7 @@ in sources."assert-plus-1.0.0" sources."async-2.6.1" sources."asynckit-0.4.0" - sources."aws-sdk-2.334.0" + sources."aws-sdk-2.349.0" sources."aws-sign2-0.7.0" sources."aws4-1.8.0" sources."base64-js-1.3.0" @@ -39279,11 +39551,7 @@ in sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."getpass-0.1.7" sources."har-schema-2.0.0" sources."har-validator-5.1.0" @@ -39302,8 +39570,8 @@ in sources."jsprim-1.4.1" sources."lodash-4.17.11" sources."lossless-json-1.0.3" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimist-0.0.10" sources."oauth-sign-0.9.0" sources."optimist-0.6.1" @@ -39317,11 +39585,11 @@ in sources."uuid-3.3.2" ]; }) - sources."requestretry-3.0.1" + sources."requestretry-3.0.2" sources."safe-buffer-5.1.2" sources."safer-buffer-2.1.2" sources."sax-1.2.1" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."through-2.3.8" (sources."tough-cookie-2.4.3" // { dependencies = [ @@ -39494,11 +39762,7 @@ in sources."firstline-1.2.1" sources."for-in-1.0.2" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fragment-cache-0.2.1" sources."fs-extra-0.30.0" sources."fs.realpath-1.0.0" @@ -39512,7 +39776,7 @@ in sources."is-glob-3.1.0" ]; }) - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" sources."has-flag-2.0.0" @@ -39559,8 +39823,8 @@ in sources."map-cache-0.2.2" sources."map-visit-1.0.0" sources."micromatch-3.1.10" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-1.2.0" sources."mixin-deep-1.3.1" @@ -39660,7 +39924,7 @@ in sources."source-map-url-0.4.0" sources."split-1.0.1" sources."split-string-3.1.0" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" (sources."static-extend-0.1.2" // { dependencies = [ sources."define-property-0.2.5" @@ -39807,7 +40071,7 @@ in sources."get-stream-3.0.0" sources."globals-9.18.0" sources."got-7.1.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-ansi-3.0.0" sources."has-flag-3.0.0" sources."has-symbol-support-x-1.4.2" @@ -39929,7 +40193,7 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" + sources."spdx-license-ids-3.0.2" (sources."string-width-2.1.1" // { dependencies = [ sources."strip-ansi-4.0.0" @@ -39973,17 +40237,17 @@ in eslint = nodeEnv.buildNodePackage { name = "eslint"; packageName = "eslint"; - version = "5.7.0"; + version = "5.8.0"; src = fetchurl { - url = "https://registry.npmjs.org/eslint/-/eslint-5.7.0.tgz"; - sha512 = "zYCeFQahsxffGl87U2aJ7DPyH8CbWgxBC213Y8+TCanhUTf2gEvfq3EKpHmEcozTLyPmGe9LZdMAwC/CpJBM5A=="; + url = "https://registry.npmjs.org/eslint/-/eslint-5.8.0.tgz"; + sha512 = "Zok6Bru3y2JprqTNm14mgQ15YQu/SMDkWdnmHfFg770DIUlmMFd/gqqzCHekxzjHZJxXv3tmTpH0C1icaYJsRQ=="; }; dependencies = [ sources."@babel/code-frame-7.0.0" sources."@babel/highlight-7.0.0" - sources."acorn-5.7.3" - sources."acorn-jsx-4.1.1" - sources."ajv-6.5.4" + sources."acorn-6.0.4" + sources."acorn-jsx-5.0.0" + sources."ajv-6.5.5" sources."ansi-escapes-3.1.0" sources."ansi-regex-3.0.0" sources."ansi-styles-3.2.1" @@ -40012,7 +40276,7 @@ in sources."eslint-scope-4.0.0" sources."eslint-utils-1.3.1" sources."eslint-visitor-keys-1.0.0" - sources."espree-4.0.0" + sources."espree-4.1.0" sources."esprima-4.0.1" sources."esquery-1.0.1" sources."esrecurse-4.2.1" @@ -40030,7 +40294,7 @@ in sources."glob-7.1.3" sources."globals-11.8.0" sources."globby-5.0.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-flag-3.0.0" sources."iconv-lite-0.4.24" sources."ignore-4.0.6" @@ -40072,7 +40336,7 @@ in sources."pinkie-promise-2.0.1" sources."pluralize-7.0.0" sources."prelude-ls-1.1.2" - sources."progress-2.0.0" + sources."progress-2.0.1" sources."punycode-2.1.1" sources."regexpp-2.0.1" sources."require-uncached-1.0.3" @@ -40124,9 +40388,9 @@ in dependencies = [ sources."@babel/code-frame-7.0.0" sources."@babel/highlight-7.0.0" - sources."acorn-5.7.3" - sources."acorn-jsx-4.1.1" - sources."ajv-6.5.4" + sources."acorn-6.0.4" + sources."acorn-jsx-5.0.0" + sources."ajv-6.5.5" sources."ansi-escapes-3.1.0" sources."ansi-regex-3.0.0" sources."ansi-styles-3.2.1" @@ -40152,11 +40416,11 @@ in sources."del-2.2.2" sources."doctrine-2.1.0" sources."escape-string-regexp-1.0.5" - sources."eslint-5.7.0" + sources."eslint-5.8.0" sources."eslint-scope-4.0.0" sources."eslint-utils-1.3.1" sources."eslint-visitor-keys-1.0.0" - sources."espree-4.0.0" + sources."espree-4.1.0" sources."esprima-4.0.1" sources."esquery-1.0.1" sources."esrecurse-4.2.1" @@ -40174,7 +40438,7 @@ in sources."glob-7.1.3" sources."globals-11.8.0" sources."globby-5.0.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-flag-3.0.0" sources."iconv-lite-0.4.24" sources."ignore-4.0.6" @@ -40218,7 +40482,7 @@ in sources."pinkie-promise-2.0.1" sources."pluralize-7.0.0" sources."prelude-ls-1.1.2" - sources."progress-2.0.0" + sources."progress-2.0.1" sources."punycode-2.1.1" sources."regexpp-2.0.1" sources."require-uncached-1.0.3" @@ -40328,15 +40592,11 @@ in sources."fd-slicer-1.0.1" sources."find-up-1.1.2" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fs-extra-1.0.0" sources."get-stdin-4.0.1" sources."getpass-0.1.7" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" sources."has-ansi-2.0.0" @@ -40375,8 +40635,8 @@ in sources."loud-rejection-1.6.0" sources."map-obj-1.0.1" sources."meow-3.7.0" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."minimist-1.2.0" (sources."mkdirp-0.5.1" // { @@ -40433,8 +40693,8 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" - sources."sshpk-1.15.1" + sources."spdx-license-ids-3.0.2" + sources."sshpk-1.15.2" sources."string_decoder-1.1.1" sources."strip-ansi-3.0.1" sources."strip-bom-2.0.0" @@ -40604,7 +40864,7 @@ in sources."glob-7.1.3" sources."glob-base-0.3.0" sources."glob-parent-2.0.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" (sources."has-value-1.0.0" // { dependencies = [ sources."isobject-3.0.1" @@ -40737,7 +40997,7 @@ in sources."process-nextick-args-2.0.0" sources."prompt-0.2.14" sources."ps-tree-0.0.3" - (sources."randomatic-3.1.0" // { + (sources."randomatic-3.1.1" // { dependencies = [ sources."is-number-4.0.0" sources."kind-of-6.0.2" @@ -40923,7 +41183,7 @@ in sources."microee-0.0.6" sources."minilog-3.1.0" sources."ms-2.1.1" - sources."simple-git-1.105.0" + sources."simple-git-1.107.0" sources."tabtab-git+https://github.com/mixu/node-tabtab.git" ]; buildInputs = globalBuildInputs; @@ -40947,9 +41207,11 @@ in sources."asyncmemo-1.0.0" sources."chloride-2.2.10" sources."chloride-test-1.2.2" + sources."colors-0.5.1" sources."deep-equal-1.0.1" sources."deep-extend-0.6.0" sources."diff-3.5.0" + sources."discontinuous-range-1.0.0" sources."ed2curve-0.1.4" sources."emoji-named-characters-1.0.2" sources."explain-error-1.0.4" @@ -40959,12 +41221,13 @@ in sources."git-remote-ssb-2.0.4" sources."git-ssb-web-2.8.0" sources."hashlru-2.2.1" - sources."highlight.js-9.13.0" + sources."highlight.js-9.13.1" sources."increment-buffer-1.0.1" sources."inherits-2.0.3" sources."ini-1.3.5" sources."ip-1.1.5" - sources."is-electron-2.1.0" + sources."is-canonical-base64-1.1.1" + sources."is-electron-2.2.0" sources."is-my-ip-valid-1.0.0" sources."is-my-json-valid-2.19.0" sources."is-property-1.0.2" @@ -40977,8 +41240,8 @@ in sources."libsodium-wrappers-0.7.3" sources."looper-4.0.0" sources."lrucache-1.0.3" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimist-1.2.0" (sources."mkdirp-0.5.1" // { dependencies = [ @@ -40986,12 +41249,16 @@ in ]; }) sources."moment-2.22.2" + sources."moo-0.4.3" sources."multicb-1.2.2" - sources."multiserver-1.13.5" + sources."multiserver-1.13.7" + sources."multiserver-address-1.0.1" sources."muxrpc-6.4.1" sources."nan-2.11.1" + sources."nearley-2.15.1" sources."node-gyp-build-3.5.0" sources."node-polyglot-1.0.0" + sources."nomnom-1.6.2" sources."non-private-ip-1.4.4" sources."options-0.0.6" sources."os-homedir-1.0.2" @@ -41044,9 +41311,12 @@ in ]; }) sources."pull-ws-3.3.1" + sources."railroad-diagrams-1.0.0" + sources."randexp-0.4.6" sources."rc-1.2.8" sources."relative-url-1.0.2" sources."remove-markdown-0.1.0" + sources."ret-0.1.15" sources."safe-buffer-5.1.2" sources."secret-handshake-1.1.14" sources."semver-5.6.0" @@ -41065,7 +41335,7 @@ in sources."split-buffer-1.0.0" sources."ssb-avatar-0.2.0" sources."ssb-client-4.6.0" - sources."ssb-config-2.3.5" + sources."ssb-config-2.3.7" sources."ssb-git-0.5.0" sources."ssb-git-repo-2.8.3" sources."ssb-issues-1.0.0" @@ -41083,7 +41353,7 @@ in }) sources."ssb-msgs-5.2.0" sources."ssb-pull-requests-1.0.0" - sources."ssb-ref-2.12.0" + sources."ssb-ref-2.13.6" (sources."stream-to-pull-stream-1.7.2" // { dependencies = [ sources."looper-3.0.0" @@ -41094,6 +41364,7 @@ in sources."tweetnacl-0.14.5" sources."tweetnacl-auth-0.3.1" sources."ultron-1.0.2" + sources."underscore-1.4.4" sources."ws-1.1.5" sources."xtend-4.0.1" ]; @@ -41126,10 +41397,10 @@ in graphql-cli = nodeEnv.buildNodePackage { name = "graphql-cli"; packageName = "graphql-cli"; - version = "2.16.7"; + version = "2.17.0"; src = fetchurl { - url = "https://registry.npmjs.org/graphql-cli/-/graphql-cli-2.16.7.tgz"; - sha512 = "I1kkJ9mqgctjOHDTo3bg7CLpZDeuLrOhKeNmohWhka2bWb0jf5T9IspHLDDTIEsOB56KEnvW2fUwRsTFHJK2HQ=="; + url = "https://registry.npmjs.org/graphql-cli/-/graphql-cli-2.17.0.tgz"; + sha512 = "K82gG79pA3G8GzMeqFq5+kkdZi7K6UWlvmrWLuGaIvo8F1wdHAKDvfexjRGb5CPisqAJqQqbsGsfrg7If488kA=="; }; dependencies = [ sources."@babel/generator-7.0.0-beta.38" @@ -41224,11 +41495,7 @@ in sources."cookie-signature-1.0.6" sources."core-js-2.5.7" sources."core-util-is-1.0.2" - (sources."cosmiconfig-3.1.0" // { - dependencies = [ - sources."parse-json-3.0.0" - ]; - }) + sources."cosmiconfig-3.1.0" sources."create-error-class-3.0.2" (sources."cross-fetch-2.2.2" // { dependencies = [ @@ -41299,11 +41566,7 @@ in sources."find-0.2.9" sources."find-up-2.1.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."format-util-1.0.3" sources."forwarded-0.1.2" sources."fresh-0.5.2" @@ -41317,7 +41580,7 @@ in sources."global-modules-1.0.0" sources."global-prefix-1.0.2" sources."got-6.7.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."graphcool-json-schema-1.2.1" (sources."graphcool-yml-0.4.15" // { dependencies = [ @@ -41338,17 +41601,16 @@ in sources."lodash-4.17.5" ]; }) - sources."graphql-config-2.0.1" - sources."graphql-config-extension-graphcool-1.0.8" - sources."graphql-config-extension-openapi-1.0.6" - sources."graphql-config-extension-prisma-0.2.1" - sources."graphql-import-0.4.5" - (sources."graphql-playground-html-1.5.5" // { + (sources."graphql-config-2.2.1" // { dependencies = [ - sources."graphql-config-2.0.0" + sources."graphql-import-0.7.1" ]; }) - sources."graphql-playground-middleware-express-1.6.2" + sources."graphql-config-extension-graphcool-1.0.11" + sources."graphql-config-extension-prisma-0.2.5" + sources."graphql-import-0.4.5" + sources."graphql-playground-html-1.6.4" + sources."graphql-playground-middleware-express-1.7.6" sources."graphql-request-1.8.2" sources."graphql-schema-linter-0.1.1" sources."graphql-static-binding-0.9.3" @@ -41436,7 +41698,11 @@ in sources."jws-3.1.5" sources."latest-version-3.1.0" sources."lcid-1.0.0" - sources."load-json-file-2.0.0" + (sources."load-json-file-2.0.0" // { + dependencies = [ + sources."parse-json-2.2.0" + ]; + }) sources."locate-path-2.0.0" sources."lodash-4.17.11" sources."lodash.get-4.4.2" @@ -41463,8 +41729,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" @@ -41474,8 +41740,8 @@ in sources."negotiator-0.6.1" sources."nice-try-1.0.5" sources."no-case-2.3.2" - sources."node-fetch-2.2.0" - sources."node-request-by-swagger-1.1.3" + sources."node-fetch-2.2.1" + sources."node-request-by-swagger-1.1.4" sources."normalize-package-data-2.4.0" sources."npm-path-2.0.4" sources."npm-paths-1.0.0" @@ -41505,7 +41771,7 @@ in sources."package-json-4.0.1" sources."param-case-2.1.1" sources."parse-github-url-1.0.2" - sources."parse-json-2.2.0" + sources."parse-json-3.0.0" sources."parse-passwd-1.0.0" sources."parseurl-1.3.2" sources."pascal-case-2.0.1" @@ -41519,11 +41785,12 @@ in sources."performance-now-2.1.0" sources."pify-2.3.0" sources."prepend-http-1.0.4" - sources."prisma-json-schema-0.1.1" - (sources."prisma-yml-1.0.93" // { + sources."prisma-json-schema-0.1.3" + (sources."prisma-yml-1.20.0-beta.18" // { dependencies = [ sources."debug-3.2.6" sources."dotenv-4.0.0" + sources."fs-extra-7.0.0" sources."ms-2.1.1" ]; }) @@ -41564,6 +41831,7 @@ in sources."require-from-string-2.0.2" sources."require-main-filename-1.0.1" sources."resolve-dir-1.0.1" + sources."resolve-from-4.0.0" sources."restore-cursor-2.0.0" sources."rimraf-2.6.2" sources."run-async-2.3.0" @@ -41593,9 +41861,9 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" + sources."spdx-license-ids-3.0.2" sources."sprintf-js-1.0.3" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."statuses-1.4.0" sources."stealthy-require-1.1.1" (sources."string-width-2.1.1" // { @@ -41618,6 +41886,7 @@ in sources."timed-out-4.0.1" sources."title-case-2.1.1" sources."tmp-0.0.33" + sources."tmp-graphql-config-extension-openapi-1.0.7" sources."to-fast-properties-2.0.0" sources."tough-cookie-2.4.3" sources."traverse-chain-0.1.0" @@ -41646,7 +41915,7 @@ in sources."whatwg-fetch-2.0.4" sources."which-1.3.1" sources."which-module-2.0.0" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" (sources."wrap-ansi-2.1.0" // { dependencies = [ sources."ansi-regex-2.1.1" @@ -41681,10 +41950,10 @@ in grunt-cli = nodeEnv.buildNodePackage { name = "grunt-cli"; packageName = "grunt-cli"; - version = "1.3.1"; + version = "1.3.2"; src = fetchurl { - url = "https://registry.npmjs.org/grunt-cli/-/grunt-cli-1.3.1.tgz"; - sha512 = "UwBRu/QpAjDc53DRLEkyilFdL0zenpxu+fddTIlsF/KJqdNcHaQmvyu1W3cDesZ9rqqZdKK5A8+QDIyLUEWoZQ=="; + url = "https://registry.npmjs.org/grunt-cli/-/grunt-cli-1.3.2.tgz"; + sha512 = "8OHDiZZkcptxVXtMfDxJvmN7MVJNE8L/yIcPb4HB7TlyFD1kDvjHrb62uhySsU14wJx9ORMnTuhRMQ40lH/orQ=="; }; dependencies = [ sources."abbrev-1.1.1" @@ -41936,7 +42205,7 @@ in }) sources."urix-0.1.0" sources."use-3.1.1" - sources."v8flags-3.0.2" + sources."v8flags-3.1.1" sources."which-1.3.1" ]; buildInputs = globalBuildInputs; @@ -42536,7 +42805,7 @@ in sources."global-modules-1.0.0" sources."global-prefix-1.0.2" sources."glogg-1.0.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."gulplog-1.0.0" sources."has-value-1.0.0" (sources."has-values-1.0.0" // { @@ -42703,7 +42972,7 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" + sources."spdx-license-ids-3.0.2" sources."split-string-3.1.0" sources."stack-trace-0.0.10" (sources."static-extend-0.1.2" // { @@ -42868,7 +43137,7 @@ in (sources."dom-serializer-0.1.0" // { dependencies = [ sources."domelementtype-1.1.3" - sources."entities-1.1.1" + sources."entities-1.1.2" ]; }) sources."domelementtype-1.3.0" @@ -42905,11 +43174,7 @@ in sources."for-in-1.0.2" sources."for-own-1.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fs-extra-1.0.0" sources."fs.realpath-1.0.0" (sources."ftp-0.3.10" // { @@ -42927,7 +43192,7 @@ in sources."glob-7.1.3" sources."glob-base-0.3.0" sources."glob-parent-2.0.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."graphlib-2.1.5" sources."har-schema-2.0.0" sources."har-validator-5.1.0" @@ -43020,8 +43285,8 @@ in sources."lru-cache-4.1.3" sources."macos-release-1.1.0" sources."make-dir-1.3.0" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" @@ -43112,22 +43377,22 @@ in sources."shelljs-0.3.0" sources."signal-exit-3.0.2" sources."smart-buffer-1.1.15" - sources."snyk-1.103.4" + sources."snyk-1.108.0" sources."snyk-config-2.2.0" - sources."snyk-docker-plugin-1.12.0" - sources."snyk-go-plugin-1.5.2" + sources."snyk-docker-plugin-1.12.1" + sources."snyk-go-plugin-1.6.0" sources."snyk-gradle-plugin-2.1.0" - sources."snyk-module-1.8.2" + sources."snyk-module-1.9.1" sources."snyk-mvn-plugin-2.0.0" - (sources."snyk-nodejs-lockfile-parser-1.5.3" // { + (sources."snyk-nodejs-lockfile-parser-1.7.0" // { dependencies = [ sources."lodash-4.17.10" ]; }) sources."snyk-nuget-plugin-1.6.5" sources."snyk-php-plugin-1.5.1" - sources."snyk-policy-1.12.0" - sources."snyk-python-plugin-1.8.2" + sources."snyk-policy-1.13.1" + sources."snyk-python-plugin-1.9.0" sources."snyk-resolve-1.0.1" sources."snyk-resolve-deps-4.0.2" sources."snyk-sbt-plugin-2.0.0" @@ -43139,7 +43404,7 @@ in sources."source-map-support-0.5.9" sources."split-1.0.1" sources."sprintf-js-1.0.3" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."stack-trace-0.0.10" sources."statuses-1.5.0" sources."string-width-2.1.1" @@ -43223,16 +43488,16 @@ in html-minifier = nodeEnv.buildNodePackage { name = "html-minifier"; packageName = "html-minifier"; - version = "3.5.20"; + version = "3.5.21"; src = fetchurl { - url = "https://registry.npmjs.org/html-minifier/-/html-minifier-3.5.20.tgz"; - sha512 = "ZmgNLaTp54+HFKkONyLFEfs5dd/ZOtlquKaTnqIWFmx3Av5zG6ZPcV2d0o9XM2fXOTxxIf6eDcwzFFotke/5zA=="; + url = "https://registry.npmjs.org/html-minifier/-/html-minifier-3.5.21.tgz"; + sha512 = "LKUKwuJDhxNa3uf/LPR/KVjm/l3rBqtYeCOAekvG8F1vItxMUpueGd94i/asDDr8/1u7InxzFA5EeGjhhG5mMA=="; }; dependencies = [ sources."camel-case-3.0.0" sources."clean-css-4.2.1" sources."commander-2.17.1" - sources."he-1.1.1" + sources."he-1.2.0" sources."lower-case-1.1.4" sources."no-case-2.3.2" sources."param-case-2.1.1" @@ -43282,7 +43547,7 @@ in sources."minimist-0.0.10" ]; }) - (sources."portfinder-1.0.17" // { + (sources."portfinder-1.0.19" // { dependencies = [ sources."debug-2.6.9" ]; @@ -43305,22 +43570,23 @@ in ionic = nodeEnv.buildNodePackage { name = "ionic"; packageName = "ionic"; - version = "4.2.1"; + version = "4.3.1"; src = fetchurl { - url = "https://registry.npmjs.org/ionic/-/ionic-4.2.1.tgz"; - sha512 = "4QwbtBxHYTaa/wxlYx+iXdSALs8aoEAw8poR24tTUtJRd0aKoAJM4K815DuNKLUFdgn3v0pTixdTTPLH8CADxw=="; + url = "https://registry.npmjs.org/ionic/-/ionic-4.3.1.tgz"; + sha512 = "zPMaUqiQTrDtZRjwaes0EUbqge+3CaUZRPPbusp7xCRCaT9H81ybhgVKNDzhWUvtWYPurarm4kIRPptoTv3LFA=="; }; dependencies = [ - sources."@ionic/cli-framework-1.1.1" - sources."@ionic/discover-1.0.6" - sources."@ionic/utils-fs-0.0.3" - sources."@ionic/utils-network-0.0.3" + sources."@ionic/cli-framework-1.3.0" + sources."@ionic/discover-1.0.7" + sources."@ionic/utils-fs-0.0.4" + sources."@ionic/utils-network-0.0.4" sources."agent-base-4.2.1" sources."ansi-align-2.0.0" sources."ansi-escapes-3.1.0" sources."ansi-regex-3.0.0" sources."ansi-styles-3.2.1" sources."ast-types-0.11.6" + sources."astral-regex-1.0.0" sources."async-limiter-1.0.0" sources."asynckit-0.4.0" sources."balanced-match-1.0.0" @@ -43339,7 +43605,7 @@ in sources."co-4.6.0" sources."color-convert-1.9.3" sources."color-name-1.1.3" - sources."combined-stream-1.0.6" + sources."combined-stream-1.0.7" sources."component-emitter-1.2.1" sources."concat-map-0.0.1" sources."configstore-3.1.2" @@ -43373,7 +43639,7 @@ in sources."fast-levenshtein-2.0.6" sources."figures-2.0.0" sources."file-uri-to-path-1.0.0" - sources."form-data-2.3.2" + sources."form-data-2.3.3" sources."formidable-1.2.1" sources."fs-minipass-1.2.5" sources."fs.realpath-1.0.0" @@ -43394,7 +43660,7 @@ in sources."glob-7.1.3" sources."global-dirs-0.1.1" sources."got-6.7.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-flag-3.0.0" sources."http-errors-1.6.3" (sources."http-proxy-agent-2.1.0" // { @@ -43453,18 +43719,24 @@ in sources."lodash.isarray-3.0.4" sources."lodash.keys-3.1.2" sources."lodash.restparam-3.6.1" + (sources."log-update-2.3.0" // { + dependencies = [ + sources."strip-ansi-4.0.0" + sources."wrap-ansi-3.0.1" + ]; + }) sources."lowercase-keys-1.0.1" sources."lru-cache-4.1.3" sources."macos-release-1.1.0" sources."make-dir-1.3.0" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-1.2.0" - (sources."minipass-2.3.4" // { + (sources."minipass-2.3.5" // { dependencies = [ sources."yallist-3.0.2" ]; @@ -43532,7 +43804,7 @@ in sources."shebang-command-1.2.0" sources."shebang-regex-1.0.0" sources."signal-exit-3.0.2" - sources."slice-ansi-1.0.0" + sources."slice-ansi-2.0.0" sources."smart-buffer-4.0.1" sources."socks-2.2.1" sources."socks-proxy-agent-4.0.1" @@ -43565,7 +43837,7 @@ in ]; }) sources."supports-color-5.5.0" - (sources."tar-4.4.6" // { + (sources."tar-4.4.7" // { dependencies = [ sources."yallist-3.0.2" ]; @@ -43588,7 +43860,7 @@ in sources."util-deprecate-1.0.2" sources."uuid-3.3.2" sources."which-1.3.1" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" sources."win-release-1.1.1" sources."wordwrap-1.0.0" (sources."wrap-ansi-4.0.0" // { @@ -43616,10 +43888,10 @@ in ios-deploy = nodeEnv.buildNodePackage { name = "ios-deploy"; packageName = "ios-deploy"; - version = "1.9.3"; + version = "1.9.4"; src = fetchurl { - url = "https://registry.npmjs.org/ios-deploy/-/ios-deploy-1.9.3.tgz"; - sha512 = "i/8DxXzcL2feqqL6DjUfjqUHyWVmHYNkzZFTyf6yoC4glrI3jQ+8Hhg63vzw/5OoFXN7OyXqjkshAj9c1EsVSw=="; + url = "https://registry.npmjs.org/ios-deploy/-/ios-deploy-1.9.4.tgz"; + sha512 = "pgyc19zgtwGrfx3GL8yV0c0dAPucTpJ0VZkuS3DcqxIZYC48+UW+tBTxI43u1ZDk17mop0ABLs1SkAy5SUQ6pQ=="; }; buildInputs = globalBuildInputs; meta = { @@ -43776,10 +44048,10 @@ in jake = nodeEnv.buildNodePackage { name = "jake"; packageName = "jake"; - version = "8.0.18"; + version = "8.0.19"; src = fetchurl { - url = "https://registry.npmjs.org/jake/-/jake-8.0.18.tgz"; - sha512 = "KSF3QH/uNR7pKcWgBuS7U1nYoYdcqitLEB86nvIcYztiiDsePkn2/JoSutiKP77O1MTNlbhTiNHorIrlpyy4sA=="; + url = "https://registry.npmjs.org/jake/-/jake-8.0.19.tgz"; + sha512 = "iilJduYCUwxRqH3fJ3b4cP5rqeh43pGM8OS62LDwoKCRoeYAj4t/KJAtBJ4jcsVKEOPJ1jNg4o1sKibk3ZnVUw=="; }; dependencies = [ sources."ansi-styles-1.0.0" @@ -43904,7 +44176,7 @@ in }) sources."glob-7.1.3" sources."global-dirs-0.1.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-flag-3.0.0" sources."hosted-git-info-2.7.1" sources."indent-string-3.2.0" @@ -44002,7 +44274,7 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" + sources."spdx-license-ids-3.0.2" sources."split2-2.2.0" sources."sprintf-js-1.0.3" sources."string-similarity-1.2.2" @@ -44081,7 +44353,7 @@ in sources."bluebird-3.5.2" sources."catharsis-0.8.9" sources."escape-string-regexp-1.0.5" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."js2xmlparser-3.0.0" sources."klaw-2.0.0" sources."marked-0.3.19" @@ -44154,7 +44426,7 @@ in (sources."dom-serializer-0.1.0" // { dependencies = [ sources."domelementtype-1.1.3" - sources."entities-1.1.1" + sources."entities-1.1.2" ]; }) sources."domelementtype-1.3.0" @@ -44172,16 +44444,12 @@ in sources."fast-json-stable-stringify-2.0.0" sources."fd-slicer-1.0.1" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fs-extra-1.0.0" sources."fs.realpath-1.0.0" sources."getpass-0.1.7" sources."glob-7.1.3" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" sources."hasha-2.2.0" @@ -44203,8 +44471,8 @@ in sources."kew-0.7.0" sources."klaw-1.3.1" sources."lodash-4.17.11" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -44230,7 +44498,7 @@ in sources."safer-buffer-2.1.2" sources."shelljs-0.3.0" sources."split-1.0.1" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."stack-trace-0.0.10" sources."string_decoder-0.10.31" sources."strip-json-comments-1.0.4" @@ -44277,13 +44545,13 @@ in js-beautify = nodeEnv.buildNodePackage { name = "js-beautify"; packageName = "js-beautify"; - version = "1.8.7"; + version = "1.8.8"; src = fetchurl { - url = "https://registry.npmjs.org/js-beautify/-/js-beautify-1.8.7.tgz"; - sha512 = "yhAMCTv0L9GNg6Gql7i+g4C1z9rQhfHXy4J0TGYFoBzzHR4reWYS573gkRrPuE58dYOH451LmBeAb8L1pLEfdA=="; + url = "https://registry.npmjs.org/js-beautify/-/js-beautify-1.8.8.tgz"; + sha512 = "qVNq7ZZ7ZbLdzorvSlRDadS0Rh5oyItaE95v6I4wbbuSiijxn7SnnsV6dvKlcXuO2jX7lK8tn9fBulx34K/Ejg=="; }; dependencies = [ - sources."@types/node-10.11.7" + sources."@types/node-10.12.2" sources."@types/semver-5.5.0" sources."abbrev-1.1.1" sources."commander-2.19.0" @@ -44388,7 +44656,7 @@ in dependencies = [ sources."argparse-1.0.10" sources."asynckit-0.4.0" - sources."combined-stream-1.0.6" + sources."combined-stream-1.0.7" sources."commander-2.11.0" sources."component-emitter-1.2.1" sources."cookiejar-2.1.2" @@ -44397,7 +44665,7 @@ in sources."delayed-stream-1.0.0" sources."esprima-4.0.1" sources."extend-3.0.2" - sources."form-data-2.3.2" + sources."form-data-2.3.3" sources."formidable-1.2.1" sources."graphlib-2.1.5" sources."inherits-2.0.3" @@ -44406,8 +44674,8 @@ in sources."lodash-4.17.11" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."ms-2.1.1" sources."native-promise-only-0.8.1" sources."path-loader-1.0.9" @@ -44478,7 +44746,7 @@ in sources."cookie-0.3.1" sources."cookie-signature-1.0.6" sources."core-util-is-1.0.2" - sources."cors-2.8.4" + sources."cors-2.8.5" sources."create-error-class-3.0.2" sources."cross-spawn-5.1.0" sources."crypto-random-string-1.0.0" @@ -44520,11 +44788,7 @@ in }) sources."find-up-2.1.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."forwarded-0.1.2" sources."fresh-0.5.2" sources."get-caller-file-1.0.3" @@ -44532,7 +44796,7 @@ in sources."getpass-0.1.7" sources."global-dirs-0.1.1" sources."got-6.7.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" sources."has-flag-3.0.0" @@ -44581,13 +44845,13 @@ in sources."method-override-2.3.10" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."minimist-1.2.0" sources."morgan-1.9.1" sources."ms-2.0.0" - sources."nanoid-1.3.0" + sources."nanoid-1.3.4" sources."negotiator-0.6.1" sources."npm-run-path-2.0.2" sources."number-is-nan-1.0.1" @@ -44641,7 +44905,7 @@ in sources."shebang-command-1.2.0" sources."shebang-regex-1.0.0" sources."signal-exit-3.0.2" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."statuses-1.5.0" sources."steno-0.4.4" sources."string-width-2.1.1" @@ -44666,7 +44930,7 @@ in sources."verror-1.10.0" sources."which-1.3.1" sources."which-module-2.0.0" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" (sources."wrap-ansi-2.1.0" // { dependencies = [ sources."ansi-regex-2.1.1" @@ -44716,10 +44980,10 @@ in karma = nodeEnv.buildNodePackage { name = "karma"; packageName = "karma"; - version = "3.0.0"; + version = "3.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/karma/-/karma-3.0.0.tgz"; - sha512 = "ZTjyuDXVXhXsvJ1E4CnZzbCjSxD6sEdzEsFYogLuZM0yqvg/mgz+O+R1jb0J7uAQeuzdY8kJgx6hSNXLwFuHIQ=="; + url = "https://registry.npmjs.org/karma/-/karma-3.1.1.tgz"; + sha512 = "NetT3wPCQMNB36uiL9LLyhrOt8SQwrEKt0xD3+KpTCfm0VxVyUJdPL5oTq2Ic5ouemgL/Iz4wqXEbF3zea9kQQ=="; }; dependencies = [ sources."accepts-1.3.5" @@ -44746,7 +45010,7 @@ in sources."base64id-1.0.0" sources."better-assert-1.0.2" sources."binary-extensions-1.12.0" - sources."blob-0.0.4" + sources."blob-0.0.5" sources."bluebird-3.5.2" sources."body-parser-1.18.3" sources."brace-expansion-1.1.11" @@ -44763,7 +45027,7 @@ in sources."cache-base-1.0.1" sources."callsite-1.0.0" sources."chokidar-2.0.4" - sources."circular-json-0.5.7" + sources."circular-json-0.5.9" (sources."class-utils-0.3.6" // { dependencies = [ sources."define-property-0.2.5" @@ -44804,7 +45068,7 @@ in sources."dom-serialize-2.2.1" sources."ee-first-1.1.1" sources."encodeurl-1.0.2" - (sources."engine.io-3.2.0" // { + (sources."engine.io-3.2.1" // { dependencies = [ sources."debug-3.1.0" ]; @@ -44814,7 +45078,7 @@ in sources."debug-3.1.0" ]; }) - sources."engine.io-parser-2.1.2" + sources."engine.io-parser-2.1.3" sources."ent-2.2.0" sources."escape-html-1.0.3" sources."eventemitter3-3.1.0" @@ -44885,7 +45149,7 @@ in sources."is-glob-3.1.0" ]; }) - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" (sources."has-binary2-1.0.3" // { dependencies = [ sources."isarray-2.0.1" @@ -44937,8 +45201,8 @@ in sources."media-typer-0.3.0" sources."micromatch-3.1.10" sources."mime-2.3.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mixin-deep-1.3.1" @@ -45198,8 +45462,8 @@ in }) sources."methods-1.1.2" sources."mime-1.3.4" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimist-0.0.8" sources."mkdirp-0.5.1" sources."morgan-1.6.1" @@ -45317,7 +45581,7 @@ in sources."glob-7.1.3" sources."glob-parent-3.1.0" sources."glob-stream-6.1.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-symbols-1.0.0" sources."inflight-1.0.6" sources."inherits-2.0.3" @@ -45383,10 +45647,10 @@ in leetcode-cli = nodeEnv.buildNodePackage { name = "leetcode-cli"; packageName = "leetcode-cli"; - version = "2.5.2"; + version = "2.5.3"; src = fetchurl { - url = "https://registry.npmjs.org/leetcode-cli/-/leetcode-cli-2.5.2.tgz"; - sha512 = "KneaqL2/SAfJQpxR1yheLrnB10f8vwJJbVBA4vxtRl6aENbO+JKsJSgE1cZvO/4isD+MPI7C5HPjJbL5+MOmnw=="; + url = "https://registry.npmjs.org/leetcode-cli/-/leetcode-cli-2.5.3.tgz"; + sha512 = "FlV2bYtdELx6NPSyd+ZfiQ9LKpjNr/UZ3orAhwx2Llg361QvS03XIxFFAi/RuvMKDi01zvHfRzsONPJt4hRXlQ=="; }; dependencies = [ sources."abab-1.0.4" @@ -45427,13 +45691,13 @@ in sources."concat-map-0.0.1" sources."core-util-is-1.0.2" sources."cross-spawn-5.1.0" - (sources."cryptiles-3.1.2" // { + (sources."cryptiles-3.1.4" // { dependencies = [ sources."boom-5.2.0" ]; }) sources."css-select-1.2.0" - sources."css-what-2.1.0" + sources."css-what-2.1.2" sources."cssom-0.3.4" sources."cssstyle-0.2.37" sources."cycle-1.0.3" @@ -45451,7 +45715,7 @@ in sources."domhandler-2.3.0" sources."domutils-1.5.1" sources."ecc-jsbn-0.1.2" - sources."entities-1.1.1" + sources."entities-1.1.2" sources."escape-string-regexp-1.0.5" sources."escodegen-1.11.0" sources."esprima-3.1.3" @@ -45466,11 +45730,7 @@ in sources."fast-levenshtein-2.0.6" sources."find-up-2.1.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fs.realpath-1.0.0" sources."get-caller-file-1.0.3" sources."get-stream-3.0.0" @@ -45512,8 +45772,8 @@ in sources."log-symbols-2.2.0" sources."lru-cache-4.1.3" sources."mem-1.1.0" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" @@ -45527,7 +45787,7 @@ in }) sources."ncp-1.0.1" sources."npm-run-path-2.0.2" - sources."nth-check-1.0.1" + sources."nth-check-1.0.2" sources."number-is-nan-1.0.1" sources."nwmatcher-1.4.4" sources."oauth-sign-0.8.2" @@ -45575,7 +45835,7 @@ in sources."sntp-2.1.0" sources."source-map-0.6.1" sources."sprintf-js-1.1.1" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."stack-trace-0.0.10" sources."string-width-1.0.2" sources."string_decoder-0.10.31" @@ -45701,11 +45961,11 @@ in sources."@lerna/version-3.4.1" sources."@lerna/write-log-file-3.0.0" sources."@mrmlnc/readdir-enhanced-2.2.1" - sources."@nodelib/fs.stat-1.1.2" + sources."@nodelib/fs.stat-1.1.3" sources."JSONStream-1.3.5" sources."abbrev-1.1.1" sources."agent-base-4.2.1" - sources."agentkeepalive-3.5.1" + sources."agentkeepalive-3.5.2" sources."ajv-5.5.2" sources."ansi-escapes-3.1.0" sources."ansi-regex-2.1.1" @@ -45751,8 +46011,8 @@ in sources."builtin-modules-1.1.1" sources."builtins-1.0.3" sources."byline-5.0.0" - sources."byte-size-4.0.3" - sources."cacache-11.2.0" + sources."byte-size-4.0.4" + sources."cacache-11.3.1" sources."cache-base-1.0.1" sources."call-me-maybe-1.0.1" sources."camelcase-4.1.0" @@ -45807,22 +46067,13 @@ in sources."concat-stream-1.6.2" sources."config-chain-1.1.12" sources."console-control-strings-1.1.0" - sources."conventional-changelog-angular-5.0.1" - (sources."conventional-changelog-core-3.1.0" // { - dependencies = [ - sources."load-json-file-1.1.0" - sources."parse-json-2.2.0" - sources."path-type-1.1.0" - sources."pify-2.3.0" - sources."read-pkg-1.1.0" - sources."strip-bom-2.0.0" - ]; - }) - sources."conventional-changelog-preset-loader-2.0.1" - sources."conventional-changelog-writer-4.0.0" - sources."conventional-commits-filter-2.0.0" - sources."conventional-commits-parser-3.0.0" - sources."conventional-recommended-bump-4.0.1" + sources."conventional-changelog-angular-5.0.2" + sources."conventional-changelog-core-3.1.5" + sources."conventional-changelog-preset-loader-2.0.2" + sources."conventional-changelog-writer-4.0.2" + sources."conventional-commits-filter-2.0.1" + sources."conventional-commits-parser-3.0.1" + sources."conventional-recommended-bump-4.0.4" sources."copy-concurrently-1.0.5" sources."copy-descriptor-0.1.1" sources."core-util-is-1.0.2" @@ -45914,11 +46165,7 @@ in sources."flush-write-stream-1.0.3" sources."for-in-1.0.2" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fragment-cache-0.2.1" sources."from2-2.3.0" sources."fs-extra-7.0.0" @@ -45932,17 +46179,26 @@ in sources."string-width-1.0.2" ]; }) - sources."genfun-4.0.1" + sources."genfun-5.0.0" sources."get-caller-file-1.0.3" (sources."get-pkg-repo-1.4.0" // { dependencies = [ sources."camelcase-2.1.1" sources."camelcase-keys-2.1.0" sources."decamelize-1.2.0" + sources."find-up-1.1.2" sources."indent-string-2.1.0" + sources."load-json-file-1.1.0" sources."map-obj-1.0.1" sources."meow-3.7.0" + sources."parse-json-2.2.0" + sources."path-exists-2.1.0" + sources."path-type-1.1.0" + sources."pify-2.3.0" + sources."read-pkg-1.1.0" + sources."read-pkg-up-1.0.1" sources."redent-1.0.0" + sources."strip-bom-2.0.0" sources."strip-indent-1.0.1" sources."trim-newlines-1.0.0" ]; @@ -45958,13 +46214,13 @@ in sources."pify-2.3.0" ]; }) - sources."git-semver-tags-2.0.0" + sources."git-semver-tags-2.0.2" sources."gitconfiglocal-1.0.0" sources."glob-7.1.3" sources."glob-parent-3.1.0" sources."glob-to-regexp-0.3.0" sources."globby-8.0.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" (sources."handlebars-4.0.12" // { dependencies = [ sources."source-map-0.6.1" @@ -46078,25 +46334,16 @@ in sources."map-obj-2.0.0" sources."map-visit-1.0.0" sources."mem-4.0.0" - (sources."meow-4.0.1" // { - dependencies = [ - sources."find-up-2.1.0" - sources."locate-path-2.0.0" - sources."p-limit-1.3.0" - sources."p-locate-2.0.0" - sources."p-try-1.0.0" - sources."read-pkg-up-3.0.0" - ]; - }) + sources."meow-4.0.1" sources."merge2-1.2.3" sources."micromatch-3.1.10" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-1.2.0" sources."minimist-options-3.0.2" - (sources."minipass-2.3.4" // { + (sources."minipass-2.3.5" // { dependencies = [ sources."yallist-3.0.2" ]; @@ -46133,7 +46380,7 @@ in sources."npm-lifecycle-2.1.0" sources."npm-package-arg-6.1.0" sources."npm-packlist-1.1.12" - sources."npm-pick-manifest-2.1.0" + sources."npm-pick-manifest-2.2.3" sources."npm-registry-fetch-3.8.0" sources."npm-run-path-2.0.2" sources."npmlog-4.1.2" @@ -46182,11 +46429,7 @@ in sources."p-reduce-1.0.0" sources."p-try-2.0.0" sources."p-waterfall-1.0.0" - (sources."pacote-9.1.0" // { - dependencies = [ - sources."get-stream-3.0.0" - ]; - }) + sources."pacote-9.2.3" sources."parallel-transform-1.1.0" sources."parse-github-repo-url-1.4.1" sources."parse-json-4.0.0" @@ -46215,7 +46458,7 @@ in sources."promise-retry-1.1.1" sources."promzard-0.3.0" sources."proto-list-1.2.4" - sources."protoduck-5.0.0" + sources."protoduck-5.0.1" sources."pseudomap-1.0.2" sources."psl-1.1.29" sources."pump-3.0.0" @@ -46233,16 +46476,13 @@ in sources."read-package-json-2.0.13" sources."read-package-tree-5.2.1" sources."read-pkg-3.0.0" - (sources."read-pkg-up-1.0.1" // { + (sources."read-pkg-up-3.0.0" // { dependencies = [ - sources."find-up-1.1.2" - sources."load-json-file-1.1.0" - sources."parse-json-2.2.0" - sources."path-exists-2.1.0" - sources."path-type-1.1.0" - sources."pify-2.3.0" - sources."read-pkg-1.1.0" - sources."strip-bom-2.0.0" + sources."find-up-2.1.0" + sources."locate-path-2.0.0" + sources."p-limit-1.3.0" + sources."p-locate-2.0.0" + sources."p-try-1.0.0" ]; }) sources."readable-stream-2.3.6" @@ -46322,12 +46562,12 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" + sources."spdx-license-ids-3.0.2" sources."split-1.0.1" sources."split-string-3.1.0" sources."split2-2.2.0" sources."sprintf-js-1.0.3" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."ssri-6.0.1" (sources."static-extend-0.1.2" // { dependencies = [ @@ -46361,7 +46601,7 @@ in sources."strip-indent-2.0.0" sources."strong-log-transformer-2.0.0" sources."supports-color-5.5.0" - (sources."tar-4.4.6" // { + (sources."tar-4.4.7" // { dependencies = [ sources."yallist-3.0.2" ]; @@ -46488,13 +46728,9 @@ in sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."getpass-0.1.7" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" sources."http-signature-1.2.0" @@ -46507,8 +46743,8 @@ in sources."json-stringify-safe-5.0.1" sources."jsprim-1.4.1" sources."mime-1.6.0" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimist-0.0.8" sources."mkdirp-0.5.1" sources."oauth-sign-0.9.0" @@ -46522,7 +46758,7 @@ in sources."safe-buffer-5.1.2" sources."safer-buffer-2.1.2" sources."source-map-0.6.1" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."tough-cookie-2.4.3" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" @@ -46627,7 +46863,7 @@ in }) sources."copy-descriptor-0.1.1" sources."core-util-is-1.0.2" - sources."cors-2.8.4" + sources."cors-2.8.5" sources."debug-2.6.9" sources."decode-uri-component-0.2.0" (sources."define-property-2.0.2" // { @@ -46669,7 +46905,7 @@ in sources."get-value-2.0.6" sources."glob-base-0.3.0" sources."glob-parent-2.0.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" (sources."has-value-1.0.0" // { dependencies = [ sources."isobject-3.0.1" @@ -46691,7 +46927,7 @@ in sources."statuses-1.5.0" ]; }) - sources."http-parser-js-0.4.13" + sources."http-parser-js-0.5.0" sources."inherits-2.0.3" (sources."is-accessor-descriptor-1.0.0" // { dependencies = [ @@ -46734,8 +46970,8 @@ in sources."math-random-1.0.1" sources."micromatch-2.3.11" sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" (sources."mixin-deep-1.3.1" // { dependencies = [ sources."is-extendable-1.0.1" @@ -46789,7 +47025,7 @@ in sources."preserve-0.2.0" sources."process-nextick-args-2.0.0" sources."proxy-middleware-0.15.0" - (sources."randomatic-3.1.0" // { + (sources."randomatic-3.1.1" // { dependencies = [ sources."is-number-4.0.0" sources."kind-of-6.0.2" @@ -47005,7 +47241,7 @@ in sources."bcrypt-pbkdf-1.0.2" sources."better-assert-1.0.2" sources."binary-extensions-1.12.0" - sources."blob-0.0.4" + sources."blob-0.0.5" sources."body-parser-1.18.3" sources."braces-1.8.5" sources."bytes-3.0.0" @@ -47062,7 +47298,7 @@ in sources."ee-first-1.1.1" sources."emoji-regex-6.1.1" sources."encodeurl-1.0.2" - (sources."engine.io-3.2.0" // { + (sources."engine.io-3.2.1" // { dependencies = [ sources."debug-3.1.0" ]; @@ -47072,8 +47308,8 @@ in sources."debug-3.1.0" ]; }) - sources."engine.io-parser-2.1.2" - sources."entities-1.1.1" + sources."engine.io-parser-2.1.3" + sources."entities-1.1.2" sources."escape-html-1.0.3" sources."etag-1.8.1" sources."expand-brackets-0.1.5" @@ -47103,11 +47339,7 @@ in sources."for-in-1.0.2" sources."for-own-0.1.5" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."forwarded-0.1.2" sources."fragment-cache-0.2.1" sources."fresh-0.5.2" @@ -47117,7 +47349,7 @@ in sources."github-slugger-1.2.0" sources."glob-base-0.3.0" sources."glob-parent-2.0.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" (sources."has-binary2-1.0.3" // { @@ -47205,8 +47437,8 @@ in sources."methods-1.1.2" sources."micromatch-2.3.11" sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimist-1.2.0" (sources."mixin-deep-1.3.1" // { dependencies = [ @@ -47266,7 +47498,7 @@ in sources."psl-1.1.29" sources."punycode-1.4.1" sources."qs-6.5.2" - (sources."randomatic-3.1.0" // { + (sources."randomatic-3.1.1" // { dependencies = [ sources."is-number-4.0.0" sources."kind-of-6.0.2" @@ -47396,7 +47628,7 @@ in sources."source-map-url-0.4.0" sources."split-string-3.1.0" sources."sprintf-js-1.0.3" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" (sources."static-extend-0.1.2" // { dependencies = [ sources."define-property-0.2.5" @@ -47773,15 +48005,11 @@ in sources."for-in-1.0.2" sources."for-own-1.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fragment-cache-0.2.1" (sources."fs-mkdirp-stream-1.0.0" // { dependencies = [ - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."readable-stream-2.3.6" sources."string_decoder-1.1.1" sources."through2-2.0.3" @@ -47832,7 +48060,7 @@ in }) (sources."gulp-sourcemaps-2.6.4" // { dependencies = [ - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."readable-stream-2.3.6" sources."source-map-0.6.1" sources."string_decoder-1.1.1" @@ -47846,7 +48074,7 @@ in sources."clone-stats-1.0.0" sources."glob-7.1.3" sources."glob-stream-6.1.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."minimatch-3.0.4" sources."ordered-read-streams-1.0.1" sources."readable-stream-2.3.6" @@ -47941,7 +48169,7 @@ in (sources."less-3.8.1" // { dependencies = [ sources."clone-2.1.2" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."source-map-0.6.1" ]; }) @@ -47981,8 +48209,8 @@ in sources."memoizee-0.4.14" sources."micromatch-3.1.10" sources."mime-1.6.0" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-2.0.10" sources."minimist-1.2.0" (sources."mixin-deep-1.3.1" // { @@ -48125,7 +48353,7 @@ in sources."source-map-url-0.4.0" sources."sparkles-1.0.1" sources."split-string-3.1.0" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" (sources."static-extend-0.1.2" // { dependencies = [ sources."define-property-0.2.5" @@ -48179,7 +48407,7 @@ in sources."tough-cookie-2.4.3" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" - sources."typescript-3.1.3" + sources."typescript-3.1.6" (sources."uglify-js-3.4.9" // { dependencies = [ sources."source-map-0.6.1" @@ -48222,7 +48450,7 @@ in dependencies = [ sources."clone-2.1.2" sources."clone-stats-1.0.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."vinyl-2.2.0" ]; }) @@ -48297,7 +48525,7 @@ in dependencies = [ sources."argparse-1.0.10" sources."asynckit-0.4.0" - sources."combined-stream-1.0.6" + sources."combined-stream-1.0.7" sources."commander-2.19.0" sources."component-emitter-1.2.1" sources."cookiejar-2.1.2" @@ -48306,7 +48534,7 @@ in sources."delayed-stream-1.0.0" sources."esprima-4.0.1" sources."extend-3.0.2" - sources."form-data-2.3.2" + sources."form-data-2.3.3" sources."formidable-1.2.1" sources."graphlib-2.1.5" sources."inherits-2.0.3" @@ -48316,8 +48544,8 @@ in sources."lodash-4.17.11" sources."methods-1.1.2" sources."mime-1.6.0" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."ms-2.1.1" sources."native-promise-only-0.8.1" sources."path-loader-1.0.9" @@ -48405,11 +48633,7 @@ in sources."findit-2.0.0" sources."foreachasync-3.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" (sources."fs-extra-0.6.4" // { dependencies = [ sources."mkdirp-0.3.5" @@ -48422,7 +48646,7 @@ in }) sources."gauge-2.7.4" sources."getpass-0.1.7" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" sources."has-unicode-2.0.1" @@ -48441,10 +48665,10 @@ in sources."json-stringify-safe-5.0.1" sources."jsonfile-1.0.1" sources."jsprim-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimist-0.0.8" - sources."minipass-2.3.4" + sources."minipass-2.3.5" sources."minizlib-1.1.1" sources."mkdirp-0.5.1" sources."ncp-0.4.2" @@ -48488,8 +48712,8 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" - sources."sshpk-1.15.1" + sources."spdx-license-ids-3.0.2" + sources."sshpk-1.15.2" sources."ssri-5.3.0" sources."string-width-1.0.2" sources."string_decoder-1.1.1" @@ -48559,17 +48783,13 @@ in sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fs.realpath-1.0.0" sources."fstream-1.0.11" sources."gauge-2.7.4" sources."getpass-0.1.7" sources."glob-7.1.3" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" sources."has-unicode-2.0.1" @@ -48586,8 +48806,8 @@ in sources."json-schema-traverse-0.3.1" sources."json-stringify-safe-5.0.1" sources."jsprim-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -48614,7 +48834,7 @@ in sources."semver-5.3.0" sources."set-blocking-2.0.0" sources."signal-exit-3.0.2" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."string-width-1.0.2" sources."string_decoder-1.1.1" sources."strip-ansi-3.0.1" @@ -48748,7 +48968,7 @@ in ]; }) sources."glob-5.0.15" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-1.0.5" sources."har-validator-4.2.1" sources."has-unicode-2.0.1" @@ -48794,8 +49014,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-1.2.0" (sources."mkdirp-0.5.1" // { @@ -48873,8 +49093,8 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" - (sources."sshpk-1.15.1" // { + sources."spdx-license-ids-3.0.2" + (sources."sshpk-1.15.2" // { dependencies = [ sources."assert-plus-1.0.0" ]; @@ -48986,7 +49206,7 @@ in sources."isarray-1.0.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" - sources."minipass-2.3.4" + sources."minipass-2.3.5" sources."minizlib-1.1.1" sources."mkdirp-0.5.1" sources."ms-2.0.0" @@ -49020,7 +49240,7 @@ in sources."string_decoder-1.1.1" sources."strip-ansi-3.0.1" sources."strip-json-comments-2.0.1" - sources."tar-4.4.6" + sources."tar-4.4.7" sources."util-deprecate-1.0.2" sources."wide-align-1.1.3" sources."wrappy-1.0.2" @@ -49038,10 +49258,10 @@ in nodemon = nodeEnv.buildNodePackage { name = "nodemon"; packageName = "nodemon"; - version = "1.18.4"; + version = "1.18.6"; src = fetchurl { - url = "https://registry.npmjs.org/nodemon/-/nodemon-1.18.4.tgz"; - sha512 = "hyK6vl65IPnky/ee+D3IWvVGgJa/m3No2/Xc/3wanS6Ce1MWjCzH6NnhPJ/vZM+6JFym16jtHx51lmCMB9HDtg=="; + url = "https://registry.npmjs.org/nodemon/-/nodemon-1.18.6.tgz"; + sha512 = "4pHQNYEZun+IkIC2jCaXEhkZnfA7rQe73i8RkdRyDJls/K+WxR7IpI5uNUsAvQ0zWvYcCDNGD+XVtw2ZG86/uQ=="; }; dependencies = [ sources."abbrev-1.1.1" @@ -49168,7 +49388,7 @@ in }) sources."global-dirs-0.1.1" sources."got-6.7.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-flag-3.0.0" sources."has-value-1.0.0" (sources."has-values-1.0.0" // { @@ -49382,7 +49602,7 @@ in sources."use-3.1.1" sources."util-deprecate-1.0.2" sources."which-1.3.1" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" sources."write-file-atomic-2.3.0" sources."xdg-basedir-3.0.0" sources."yallist-2.1.2" @@ -49399,18 +49619,18 @@ in node-red = nodeEnv.buildNodePackage { name = "node-red"; packageName = "node-red"; - version = "0.19.4"; + version = "0.19.5"; src = fetchurl { - url = "https://registry.npmjs.org/node-red/-/node-red-0.19.4.tgz"; - sha512 = "BcFaU1bCAl0fsu6t3sSPXXPuvUiIKcHj3jrpV3zvVols+dp0zgM9xPX9N8D7978h402H8h2A+0DDQA1vENQIEA=="; + url = "https://registry.npmjs.org/node-red/-/node-red-0.19.5.tgz"; + sha512 = "Bwt5RYc77MqQjw9tSGFQHgfn6/3PTy0f9v4I4Nw4waJutGdxuAhdQJuPy6ouJpFt6CRI1ChmfJvC2ZBUMnaUCQ=="; }; dependencies = [ sources."abbrev-1.1.1" sources."accepts-1.3.5" sources."addressparser-0.3.2" sources."agent-base-4.2.1" - sources."ajv-6.5.3" - sources."append-field-0.1.0" + sources."ajv-6.5.4" + sources."append-field-1.0.0" sources."argparse-1.0.10" sources."array-flatten-1.1.1" sources."array-indexofobject-0.0.1" @@ -49422,11 +49642,15 @@ in sources."aws-sign2-0.7.0" sources."aws4-1.8.0" sources."balanced-match-1.0.0" - sources."basic-auth-2.0.0" + sources."basic-auth-2.0.1" sources."bcrypt-2.0.1" sources."bcrypt-pbkdf-1.0.2" sources."bcryptjs-2.4.3" - sources."bl-1.2.2" + (sources."bl-1.2.2" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."body-parser-1.18.3" sources."boolbase-1.0.0" sources."brace-expansion-1.1.11" @@ -49444,7 +49668,11 @@ in ]; }) sources."bytes-3.0.0" - sources."callback-stream-1.1.0" + (sources."callback-stream-1.1.0" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."caseless-0.12.0" sources."cheerio-0.22.0" sources."clone-2.1.2" @@ -49453,7 +49681,11 @@ in sources."commander-2.17.1" sources."commist-1.0.0" sources."concat-map-0.0.1" - sources."concat-stream-1.6.2" + (sources."concat-stream-1.6.2" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."content-disposition-0.5.2" sources."content-type-1.0.4" sources."cookie-0.3.1" @@ -49462,9 +49694,9 @@ in sources."core-util-is-1.0.2" sources."cors-2.8.4" sources."crc-3.4.4" - sources."cron-1.4.1" + sources."cron-1.5.0" sources."css-select-1.2.0" - sources."css-what-2.1.0" + sources."css-what-2.1.2" sources."d-1.0.0" sources."dashdash-1.14.1" sources."debug-2.6.9" @@ -49487,13 +49719,17 @@ in sources."domelementtype-1.3.0" sources."domhandler-2.4.2" sources."domutils-1.5.1" - sources."duplexify-3.6.1" + (sources."duplexify-3.6.1" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."ecc-jsbn-0.1.2" sources."ee-first-1.1.1" sources."encodeurl-1.0.2" sources."encoding-0.1.12" sources."end-of-stream-1.4.1" - sources."entities-1.1.1" + sources."entities-1.1.2" sources."es5-ext-0.10.46" sources."es6-iterator-2.0.3" sources."es6-map-0.1.5" @@ -49506,18 +49742,8 @@ in sources."esprima-4.0.1" sources."etag-1.8.1" sources."event-emitter-0.3.5" - (sources."express-4.16.3" // { + (sources."express-4.16.4" // { dependencies = [ - sources."body-parser-1.18.2" - (sources."http-errors-1.6.2" // { - dependencies = [ - sources."depd-1.1.1" - sources."setprototypeof-1.0.3" - ]; - }) - sources."iconv-lite-0.4.19" - sources."qs-6.5.1" - sources."raw-body-2.3.2" sources."statuses-1.4.0" ]; }) @@ -49529,6 +49755,7 @@ in (sources."feedparser-2.2.9" // { dependencies = [ sources."addressparser-1.0.1" + sources."readable-stream-2.3.6" ]; }) (sources."finalhandler-1.1.1" // { @@ -49537,11 +49764,7 @@ in ]; }) sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."forwarded-0.1.2" sources."fresh-0.5.2" sources."fs-extra-5.0.0" @@ -49550,8 +49773,12 @@ in sources."getpass-0.1.7" sources."glob-7.1.3" sources."glob-parent-3.1.0" - sources."glob-stream-6.1.0" - sources."graceful-fs-4.1.11" + (sources."glob-stream-6.1.0" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" (sources."har-validator-5.1.0" // { dependencies = [ @@ -49562,7 +49789,7 @@ in }) sources."hash-sum-1.0.2" sources."help-me-1.1.0" - sources."htmlparser2-3.9.2" + sources."htmlparser2-3.10.0" sources."http-errors-1.6.3" sources."http-signature-1.2.0" (sources."https-proxy-agent-2.2.1" // { @@ -49636,8 +49863,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" (sources."mimelib-0.3.1" // { dependencies = [ sources."addressparser-1.0.1" @@ -49651,16 +49878,16 @@ in ]; }) sources."moment-2.22.2" - sources."moment-timezone-0.5.21" - sources."mqtt-2.18.8" - sources."mqtt-packet-5.6.0" - sources."mri-1.1.1" - sources."ms-2.0.0" - (sources."multer-1.3.1" // { + sources."moment-timezone-0.5.23" + (sources."mqtt-2.18.8" // { dependencies = [ - sources."object-assign-3.0.0" + sources."readable-stream-2.3.6" ]; }) + sources."mqtt-packet-5.6.0" + sources."mri-1.1.1" + sources."ms-2.0.0" + sources."multer-1.4.1" sources."mustache-2.3.2" sources."nan-2.10.0" sources."needle-0.11.0" @@ -49668,8 +49895,8 @@ in sources."next-tick-1.0.0" sources."node-red-node-email-0.1.29" sources."node-red-node-feedparser-0.1.14" - sources."node-red-node-rbe-0.2.3" - sources."node-red-node-twitter-1.1.3" + sources."node-red-node-rbe-0.2.4" + sources."node-red-node-twitter-1.1.4" sources."nodemailer-1.11.0" sources."nodemailer-direct-transport-1.1.0" (sources."nodemailer-smtp-transport-1.1.0" // { @@ -49679,7 +49906,7 @@ in }) sources."nodemailer-wellknown-0.1.10" sources."nopt-4.0.1" - sources."nth-check-1.0.1" + sources."nth-check-1.0.2" sources."oauth-0.9.15" sources."oauth-sign-0.9.0" sources."oauth2orize-1.11.0" @@ -49693,7 +49920,11 @@ in ]; }) sources."options-0.0.6" - sources."ordered-read-streams-1.0.1" + (sources."ordered-read-streams-1.0.1" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."os-homedir-1.0.2" sources."os-tmpdir-1.0.2" sources."osenv-0.1.5" @@ -49723,19 +49954,15 @@ in sources."random-bytes-1.0.0" sources."range-parser-1.2.0" sources."raw-body-2.3.3" - sources."readable-stream-2.3.6" + sources."readable-stream-3.0.6" sources."reinterval-1.1.0" sources."remove-trailing-separator-1.1.0" - (sources."request-2.88.0" // { - dependencies = [ - sources."safe-buffer-5.1.2" - ]; - }) + sources."request-2.88.0" sources."retry-0.6.1" - sources."safe-buffer-5.1.1" + sources."safe-buffer-5.1.2" sources."safer-buffer-2.1.2" sources."sax-1.2.4" - sources."semver-5.5.1" + sources."semver-5.6.0" (sources."send-0.16.2" // { dependencies = [ sources."statuses-1.4.0" @@ -49748,12 +49975,16 @@ in sources."source-map-0.6.1" sources."split2-2.2.0" sources."sprintf-js-1.0.3" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."statuses-1.5.0" sources."stream-shift-1.0.0" sources."streamsearch-0.1.2" sources."string_decoder-1.1.1" - sources."through2-2.0.3" + (sources."through2-2.0.3" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."through2-filter-2.0.0" sources."to-absolute-glob-2.0.2" (sources."tough-cookie-2.4.3" // { @@ -49788,6 +50019,7 @@ in sources."verror-1.10.0" (sources."websocket-stream-5.1.2" // { dependencies = [ + sources."readable-stream-2.3.6" sources."ws-3.3.3" ]; }) @@ -49906,7 +50138,7 @@ in sources."qs-0.5.1" sources."rai-0.1.12" sources."range-parser-0.0.4" - (sources."raw-socket-1.6.3" // { + (sources."raw-socket-1.6.4" // { dependencies = [ sources."nan-2.10.0" ]; @@ -50010,11 +50242,7 @@ in sources."findit-1.2.0" sources."foreachasync-3.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" (sources."fs-extra-0.6.4" // { dependencies = [ sources."rimraf-2.2.8" @@ -50049,8 +50277,8 @@ in sources."json-stringify-safe-5.0.1" sources."jsonfile-1.0.1" sources."jsprim-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.3.5" @@ -50092,7 +50320,7 @@ in sources."set-blocking-2.0.0" sources."signal-exit-3.0.2" sources."slide-1.1.6" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."string-width-1.0.2" sources."string_decoder-1.1.1" sources."strip-ansi-3.0.1" @@ -50176,7 +50404,7 @@ in sources."get-stream-3.0.0" sources."global-dirs-0.1.1" sources."got-6.7.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-ansi-2.0.0" sources."has-flag-3.0.0" sources."import-lazy-2.1.0" @@ -50264,7 +50492,7 @@ in }) sources."url-parse-lax-1.0.0" sources."which-1.3.1" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" sources."write-file-atomic-2.3.0" sources."xdg-basedir-3.0.0" sources."yallist-2.1.2" @@ -50318,7 +50546,7 @@ in sources."find-up-2.1.0" sources."get-caller-file-1.0.3" sources."get-stream-3.0.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-flag-3.0.0" sources."hoek-4.2.1" sources."hosted-git-info-2.7.1" @@ -50383,7 +50611,7 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" + sources."spdx-license-ids-3.0.2" sources."string-width-1.0.2" sources."strip-ansi-3.0.1" sources."strip-bom-3.0.0" @@ -50537,7 +50765,7 @@ in sources."ecc-jsbn-0.1.2" sources."ee-first-1.1.1" sources."encodeurl-1.0.2" - sources."entities-1.1.1" + sources."entities-1.1.2" sources."error-ex-1.3.2" sources."escape-html-1.0.3" sources."esprima-4.0.1" @@ -50560,11 +50788,7 @@ in }) sources."find-up-1.1.2" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."forwarded-0.1.2" sources."fresh-0.5.2" sources."function-bind-1.1.1" @@ -50573,7 +50797,7 @@ in sources."get-caller-file-1.0.3" sources."getpass-0.1.7" sources."glob-6.0.4" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" (sources."handlebars-4.0.12" // { dependencies = [ sources."async-2.6.1" @@ -50592,7 +50816,7 @@ in sources."inherits-2.0.3" sources."invert-kv-1.0.0" sources."ipaddr.js-1.8.0" - sources."is-arguments-1.0.2" + sources."is-arguments-1.0.4" sources."is-arrayish-0.2.1" sources."is-builtin-module-1.0.0" sources."is-fullwidth-code-point-1.0.0" @@ -50641,12 +50865,12 @@ in sources."lodash.clone-4.3.2" sources."media-typer-0.3.0" sources."mediawiki-title-0.6.5" - sources."merge-1.2.0" + sources."merge-1.2.1" sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-0.0.10" (sources."mkdirp-0.5.1" // { @@ -50728,9 +50952,9 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" + sources."spdx-license-ids-3.0.2" sources."sprintf-js-1.0.3" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."statuses-1.5.0" sources."streamsearch-0.1.2" sources."string-width-1.0.2" @@ -50861,7 +51085,7 @@ in sources."get-browser-rtc-1.0.2" sources."get-stdin-4.0.1" sources."glob-7.1.3" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-ansi-2.0.0" sources."has-flag-3.0.0" sources."hat-0.0.3" @@ -51010,7 +51234,7 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" + sources."spdx-license-ids-3.0.2" sources."speedometer-0.1.4" sources."stream-buffers-2.2.0" sources."string-width-1.0.2" @@ -51024,7 +51248,7 @@ in sources."symbol-observable-1.0.1" sources."thirty-two-1.0.2" sources."through-2.3.8" - sources."thunky-1.0.2" + sources."thunky-1.0.3" sources."tmp-0.0.33" sources."torrent-discovery-5.4.0" sources."torrent-piece-1.1.2" @@ -51240,7 +51464,7 @@ in sources."fs.realpath-1.0.0" sources."get-browser-rtc-1.0.2" sources."glob-7.1.3" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" (sources."has-binary-0.1.7" // { dependencies = [ sources."isarray-0.0.1" @@ -51297,8 +51521,8 @@ in }) sources."methods-1.1.2" sources."mime-1.3.4" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" sources."minimist-0.0.8" @@ -51454,7 +51678,7 @@ in sources."string_decoder-1.1.1" sources."tar-stream-1.6.2" sources."thirty-two-0.0.2" - sources."thunky-1.0.2" + sources."thunky-1.0.3" sources."to-array-0.1.4" sources."to-buffer-1.1.1" sources."toidentifier-1.0.0" @@ -51502,7 +51726,7 @@ in packageName = "phantomjs"; version = "2.1.7"; src = fetchurl { - url = "https://registry.npmjs.org/phantomjs/-/phantomjs-2.1.7.tgz"; + url = "http://registry.npmjs.org/phantomjs/-/phantomjs-2.1.7.tgz"; sha1 = "c6910f67935c37285b6114329fc2f27d5f3e3134"; }; dependencies = [ @@ -51550,7 +51774,7 @@ in ]; }) sources."glob-7.1.3" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-validator-2.0.6" sources."has-ansi-2.0.0" sources."hasha-2.2.0" @@ -51580,8 +51804,8 @@ in sources."kew-0.7.0" sources."klaw-1.3.1" sources."lodash-4.17.11" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.5.0" @@ -51601,7 +51825,7 @@ in sources."rimraf-2.6.2" sources."safer-buffer-2.1.2" sources."sntp-1.0.9" - (sources."sshpk-1.15.1" // { + (sources."sshpk-1.15.2" // { dependencies = [ sources."assert-plus-1.0.0" ]; @@ -51638,10 +51862,10 @@ in pnpm = nodeEnv.buildNodePackage { name = "pnpm"; packageName = "pnpm"; - version = "2.16.3"; + version = "2.17.7"; src = fetchurl { - url = "https://registry.npmjs.org/pnpm/-/pnpm-2.16.3.tgz"; - sha512 = "W63qZOC9YGr+33JYvZjvhzvYL4YKT2gAywDJQrHvKTL6vmnnSh+GdM3ZdGIIZ6A57YB3NgvQaq/BJ2uYjwn3ZQ=="; + url = "https://registry.npmjs.org/pnpm/-/pnpm-2.17.7.tgz"; + sha512 = "FwZFpKSL4BNu1IGIScveHqZALpm6jSF7QR90CZXW4RfKaLpNYcIkkFC9iPBT4AdpPSv1UR/gYUWyQdTZBx2a5g=="; }; buildInputs = globalBuildInputs; meta = { @@ -51679,8 +51903,9 @@ in }; dependencies = [ sources."JSONStream-1.3.5" - sources."acorn-6.0.2" - sources."acorn-node-1.6.0" + sources."acorn-6.0.4" + sources."acorn-dynamic-import-4.0.0" + sources."acorn-node-1.6.2" sources."acorn-walk-6.1.0" sources."anymatch-2.0.0" sources."arr-diff-4.0.0" @@ -51852,7 +52077,7 @@ in sources."is-glob-3.1.0" ]; }) - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-1.0.3" sources."has-value-1.0.0" (sources."has-values-1.0.0" // { @@ -52087,7 +52312,7 @@ in }) sources."to-regex-3.0.2" sources."to-regex-range-2.1.1" - sources."tree-kill-1.2.0" + sources."tree-kill-1.2.1" sources."tty-browserify-0.0.1" sources."typedarray-0.0.6" sources."umd-3.0.3" @@ -52145,7 +52370,7 @@ in }; dependencies = [ sources."@types/babel-types-7.0.4" - sources."@types/babylon-6.16.3" + sources."@types/babylon-6.16.4" sources."accepts-1.3.5" sources."acorn-3.3.0" (sources."acorn-globals-3.1.0" // { @@ -52252,7 +52477,7 @@ in ]; }) sources."github-from-package-0.0.0" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-1.0.5" sources."har-validator-4.2.1" sources."has-1.0.3" @@ -52304,8 +52529,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimist-0.0.8" sources."mkdirp-0.5.1" sources."morgan-1.9.1" @@ -52313,8 +52538,8 @@ in sources."nan-2.5.1" sources."negotiator-0.6.1" sources."net-browserify-alt-1.1.0" - sources."node-abi-2.4.5" - sources."node.extend-2.0.0" + sources."node-abi-2.5.0" + sources."node.extend-2.0.1" sources."noop-logger-0.1.1" sources."npmlog-4.1.2" sources."number-is-nan-1.0.1" @@ -52393,7 +52618,7 @@ in sources."simple-get-1.4.3" sources."sntp-1.0.9" sources."source-map-0.5.7" - (sources."sshpk-1.15.1" // { + (sources."sshpk-1.15.2" // { dependencies = [ sources."assert-plus-1.0.0" ]; @@ -52473,7 +52698,7 @@ in sources."esprima-3.1.3" sources."esprima-fb-13001.1001.0-dev-harmony-fb" sources."glob-5.0.15" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."iconv-lite-0.4.24" sources."inflight-1.0.6" sources."inherits-2.0.3" @@ -52629,11 +52854,7 @@ in sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."formidable-1.0.11" sources."fresh-0.2.0" sources."getpass-0.1.7" @@ -52653,8 +52874,8 @@ in sources."keypress-0.1.0" sources."methods-0.1.0" sources."mime-1.2.11" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mkdirp-0.3.5" sources."ms-2.1.1" sources."multiparty-2.2.0" @@ -52683,7 +52904,7 @@ in sources."safer-buffer-2.1.2" sources."sax-1.2.4" sources."send-0.1.4" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."stream-counter-0.2.0" sources."string-1.6.1" sources."string_decoder-0.10.31" @@ -52706,10 +52927,10 @@ in scuttlebot = nodeEnv.buildNodePackage { name = "scuttlebot"; packageName = "scuttlebot"; - version = "13.0.0"; + version = "13.0.3"; src = fetchurl { - url = "https://registry.npmjs.org/scuttlebot/-/scuttlebot-13.0.0.tgz"; - sha512 = "niRO3ySzMcXXIrx88zBMdLZ53zvC3DALiFZL42hELL0nE3ohGlhSYQNYefgPB1KiVyMomuNvlhusw9yQsYs/dQ=="; + url = "https://registry.npmjs.org/scuttlebot/-/scuttlebot-13.0.3.tgz"; + sha512 = "/Axzh0wWOSb8n9i/7t+HaN+71rj+Q7oCnObpph7WAoroHKb2GtgZALLW2ioJ10PXbRrEPHFTkHhmvBKUKRYu4w=="; }; dependencies = [ sources."abstract-leveldown-4.0.3" @@ -52737,7 +52958,7 @@ in sources."async-single-1.0.5" sources."async-write-2.1.0" sources."atob-2.1.2" - sources."atomic-file-0.0.1" + sources."atomic-file-1.1.5" sources."attach-ware-1.1.1" sources."bail-1.0.3" sources."balanced-match-1.0.0" @@ -52803,6 +53024,7 @@ in sources."code-point-at-1.1.0" sources."collapse-white-space-1.0.4" sources."collection-visit-1.0.0" + sources."colors-0.5.1" sources."commander-2.19.0" sources."compare-at-paths-1.0.0" sources."component-emitter-1.2.1" @@ -52825,7 +53047,7 @@ in sources."continuable-series-1.2.0" sources."copy-descriptor-0.1.1" sources."core-util-is-1.0.2" - sources."cross-spawn-5.1.0" + sources."cross-spawn-6.0.5" sources."debug-2.6.9" sources."decode-uri-component-0.2.0" sources."decompress-response-3.3.0" @@ -52842,18 +53064,15 @@ in sources."delegates-1.0.0" sources."detab-1.0.2" sources."detect-libc-1.0.3" + sources."discontinuous-range-1.0.0" sources."dynamic-dijkstra-1.0.0" sources."ed2curve-0.1.4" sources."elegant-spinner-1.0.1" sources."emoji-named-characters-1.0.2" sources."emoji-server-1.0.0" - (sources."encoding-down-4.0.1" // { - dependencies = [ - sources."level-codec-8.0.0" - ]; - }) + sources."encoding-down-4.0.1" sources."end-of-stream-1.4.1" - sources."epidemic-broadcast-trees-6.3.4" + sources."epidemic-broadcast-trees-6.3.5" sources."errno-0.1.7" sources."es-abstract-1.12.0" sources."es-to-primitive-1.2.0" @@ -52874,32 +53093,35 @@ in sources."fast-future-1.0.2" sources."filename-regex-2.0.1" sources."fill-range-2.2.4" - sources."flumecodec-0.0.1" - sources."flumedb-0.5.1" - (sources."flumelog-offset-3.3.2" // { + (sources."flumecodec-0.0.0" // { dependencies = [ - sources."looper-4.0.0" + sources."level-codec-6.2.0" ]; }) - (sources."flumeview-hashtable-1.0.4" // { + (sources."flumedb-1.0.1" // { dependencies = [ - sources."atomic-file-1.1.5" + sources."pull-cont-0.0.0" + ]; + }) + (sources."flumelog-offset-3.3.2" // { + dependencies = [ + sources."looper-4.0.0" ]; }) + sources."flumeview-hashtable-1.0.4" (sources."flumeview-level-3.0.6" // { dependencies = [ + sources."level-3.0.2" sources."obv-0.0.0" ]; }) (sources."flumeview-query-6.3.0" // { dependencies = [ - sources."map-filter-reduce-3.2.1" + sources."map-filter-reduce-3.2.2" ]; }) (sources."flumeview-reduce-1.3.14" // { dependencies = [ - sources."atomic-file-1.1.5" - sources."flumecodec-0.0.0" sources."obv-0.0.0" ]; }) @@ -52918,8 +53140,7 @@ in sources."glob-base-0.3.0" sources."glob-parent-2.0.0" sources."globby-4.1.0" - sources."graceful-fs-4.1.11" - sources."graphreduce-3.0.4" + sources."graceful-fs-4.1.15" sources."has-1.0.3" sources."has-ansi-2.0.0" sources."has-network-0.0.1" @@ -52949,7 +53170,7 @@ in sources."inherits-2.0.3" sources."ini-1.3.5" sources."int53-0.2.4" - sources."ip-0.3.3" + sources."ip-1.1.5" sources."irregular-plurals-1.4.0" (sources."is-accessor-descriptor-1.0.0" // { dependencies = [ @@ -52961,6 +53182,7 @@ in sources."is-binary-path-1.0.1" sources."is-buffer-1.1.6" sources."is-callable-1.1.4" + sources."is-canonical-base64-1.1.1" (sources."is-data-descriptor-1.0.0" // { dependencies = [ sources."kind-of-6.0.2" @@ -52974,7 +53196,7 @@ in ]; }) sources."is-dotfile-1.0.3" - sources."is-electron-2.1.0" + sources."is-electron-2.2.0" sources."is-equal-shallow-0.1.3" sources."is-extendable-0.1.1" sources."is-extglob-1.0.0" @@ -52998,13 +53220,22 @@ in sources."isobject-2.1.0" sources."json-buffer-2.0.11" sources."kind-of-3.2.2" - (sources."layered-graph-1.1.1" // { - dependencies = [ - sources."pull-cont-0.1.1" + sources."layered-graph-1.1.1" + (sources."level-4.0.0" // { + dependencies = [ + sources."abstract-leveldown-5.0.0" + sources."deferred-leveldown-4.0.2" + sources."encoding-down-5.0.4" + sources."level-codec-9.0.0" + sources."level-errors-2.0.0" + sources."level-iterator-stream-3.0.1" + sources."level-packager-3.1.0" + sources."leveldown-4.0.1" + sources."levelup-3.1.1" + sources."nan-2.10.0" ]; }) - sources."level-3.0.2" - sources."level-codec-6.2.0" + sources."level-codec-8.0.0" sources."level-errors-1.1.2" sources."level-iterator-stream-2.0.3" sources."level-packager-2.1.1" @@ -53045,7 +53276,6 @@ in sources."longest-streak-1.0.0" sources."looper-3.0.0" sources."lossy-store-1.2.3" - sources."lru-cache-4.1.3" sources."ltgt-2.2.1" sources."map-cache-0.2.2" sources."map-filter-reduce-2.2.1" @@ -53069,6 +53299,7 @@ in ]; }) sources."monotonic-timestamp-0.0.9" + sources."moo-0.4.3" sources."ms-2.0.0" (sources."multiblob-1.13.1" // { dependencies = [ @@ -53078,7 +53309,8 @@ in }) sources."multiblob-http-0.4.2" sources."multicb-1.2.2" - sources."multiserver-1.13.5" + sources."multiserver-1.13.7" + sources."multiserver-address-1.0.1" sources."muxrpc-6.4.1" (sources."muxrpc-validation-2.0.1" // { dependencies = [ @@ -53104,13 +53336,12 @@ in ]; }) sources."ncp-2.0.0" - sources."node-abi-2.4.5" + sources."nearley-2.15.1" + sources."nice-try-1.0.5" + sources."node-abi-2.5.0" sources."node-gyp-build-3.5.0" - (sources."non-private-ip-1.4.4" // { - dependencies = [ - sources."ip-1.1.5" - ]; - }) + sources."nomnom-1.6.2" + sources."non-private-ip-1.4.4" sources."noop-logger-0.1.1" sources."normalize-path-2.1.1" sources."normalize-uri-1.1.1" @@ -53150,7 +53381,7 @@ in sources."on-wakeup-1.0.1" sources."once-1.4.0" sources."onetime-1.1.0" - sources."opencollective-postinstall-2.0.0" + sources."opencollective-postinstall-2.0.1" sources."options-0.0.6" sources."os-homedir-1.0.2" sources."os-tmpdir-1.0.2" @@ -53161,6 +53392,7 @@ in sources."parse-glob-3.0.4" sources."pascalcase-0.1.1" sources."path-is-absolute-1.0.1" + sources."path-key-2.0.1" sources."path-parse-1.0.6" sources."pify-2.3.0" sources."pinkie-2.0.4" @@ -53172,11 +53404,10 @@ in sources."private-box-0.3.0" sources."process-nextick-args-2.0.0" sources."prr-1.0.1" - sources."pseudomap-1.0.2" - sources."pull-abortable-4.1.1" + sources."pull-abortable-4.0.0" sources."pull-box-stream-1.0.13" sources."pull-cat-1.1.11" - sources."pull-cont-0.0.0" + sources."pull-cont-0.1.1" sources."pull-core-1.1.0" (sources."pull-cursor-3.0.0" // { dependencies = [ @@ -53199,11 +53430,7 @@ in }) sources."pull-handshake-1.1.4" sources."pull-hash-1.0.0" - (sources."pull-inactivity-2.1.2" // { - dependencies = [ - sources."pull-abortable-4.0.0" - ]; - }) + sources."pull-inactivity-2.1.3" sources."pull-level-2.0.4" sources."pull-live-1.0.1" (sources."pull-looper-1.0.0" // { @@ -53225,10 +53452,9 @@ in sources."pull-rate-1.0.2" sources."pull-reader-1.3.1" sources."pull-sink-through-0.0.0" - sources."pull-sort-1.0.1" + sources."pull-sort-1.0.2" sources."pull-stream-3.6.9" - sources."pull-stream-to-stream-1.3.4" - sources."pull-stringify-1.2.2" + sources."pull-stringify-2.0.0" sources."pull-through-1.0.18" sources."pull-traverse-1.0.3" sources."pull-utf8-decoder-1.0.2" @@ -53247,7 +53473,9 @@ in sources."pump-2.0.1" sources."push-stream-10.0.4" sources."push-stream-to-pull-stream-1.0.3" - (sources."randomatic-3.1.0" // { + sources."railroad-diagrams-1.0.0" + sources."randexp-0.4.6" + (sources."randomatic-3.1.1" // { dependencies = [ sources."is-number-4.0.0" sources."kind-of-6.0.2" @@ -53327,16 +53555,8 @@ in sources."safe-buffer-5.1.2" sources."safe-regex-1.1.0" sources."secret-handshake-1.1.14" - (sources."secret-stack-4.2.4" // { - dependencies = [ - sources."ip-1.1.5" - ]; - }) - (sources."secure-scuttlebutt-18.5.0" // { - dependencies = [ - sources."deep-equal-0.2.2" - ]; - }) + sources."secret-stack-4.2.4" + sources."secure-scuttlebutt-18.6.0" sources."semver-5.6.0" sources."separator-escape-0.0.0" sources."set-blocking-2.0.0" @@ -53378,11 +53598,7 @@ in ]; }) sources."snapdragon-util-3.0.1" - (sources."socks-2.2.1" // { - dependencies = [ - sources."ip-1.1.5" - ]; - }) + sources."socks-2.2.1" sources."sodium-browserify-1.2.4" (sources."sodium-browserify-tweetnacl-0.2.3" // { dependencies = [ @@ -53396,31 +53612,23 @@ in sources."source-map-url-0.4.0" sources."split-buffer-1.0.0" sources."split-string-3.1.0" - sources."ssb-blobs-1.1.5" + sources."ssb-blobs-1.1.6" sources."ssb-client-4.6.0" - sources."ssb-config-2.3.5" - sources."ssb-ebt-5.2.3" - (sources."ssb-friends-3.1.3" // { - dependencies = [ - sources."pull-cont-0.1.1" - ]; - }) + sources."ssb-config-2.3.7" + sources."ssb-ebt-5.2.7" + sources."ssb-friends-3.1.6" sources."ssb-keys-7.1.3" sources."ssb-links-3.0.3" sources."ssb-msgs-5.2.0" (sources."ssb-query-2.3.0" // { dependencies = [ sources."flumeview-query-7.1.0" - sources."map-filter-reduce-3.2.1" + sources."map-filter-reduce-3.2.2" ]; }) - (sources."ssb-ref-2.12.0" // { - dependencies = [ - sources."ip-1.1.5" - ]; - }) - sources."ssb-validate-3.0.11" - sources."ssb-ws-3.0.0" + sources."ssb-ref-2.13.6" + sources."ssb-validate-4.0.3" + sources."ssb-ws-3.0.2" sources."stack-0.1.0" (sources."static-extend-0.1.2" // { dependencies = [ @@ -53482,6 +53690,7 @@ in sources."typewiselite-1.0.0" sources."uint48be-1.0.2" sources."ultron-1.0.2" + sources."underscore-1.4.4" sources."unherit-1.1.1" sources."unified-2.1.4" (sources."union-value-1.0.0" // { @@ -53523,7 +53732,6 @@ in sources."wrappy-1.0.2" sources."ws-1.1.5" sources."xtend-4.0.1" - sources."yallist-2.1.2" sources."zerr-1.0.4" ]; buildInputs = globalBuildInputs; @@ -53633,7 +53841,7 @@ in sources."update-check-1.5.2" sources."uri-js-4.2.2" sources."which-1.3.1" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" sources."yallist-2.1.2" ]; buildInputs = globalBuildInputs; @@ -53717,7 +53925,7 @@ in ]; }) sources."engine.io-parser-1.0.6" - sources."entities-1.1.1" + sources."entities-1.1.2" sources."escape-html-1.0.3" sources."etag-1.8.1" sources."event-stream-3.3.6" @@ -53729,11 +53937,7 @@ in sources."finalhandler-1.1.1" sources."flatmap-stream-0.1.1" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."forwarded-0.1.2" sources."fresh-0.5.2" sources."from-0.1.7" @@ -53772,8 +53976,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimist-0.0.8" sources."mkdirp-0.5.1" sources."moment-2.7.0" @@ -53835,7 +54039,7 @@ in ]; }) sources."split-1.0.1" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."statuses-1.4.0" sources."stream-combiner-0.2.2" sources."string_decoder-0.10.31" @@ -53896,12 +54100,10 @@ in (sources."body-parser-1.18.3" // { dependencies = [ sources."bytes-3.0.0" + sources."debug-2.6.9" sources."http-errors-1.6.3" sources."iconv-lite-0.4.23" - sources."qs-6.5.2" sources."raw-body-2.3.3" - sources."setprototypeof-1.1.0" - sources."statuses-1.5.0" ]; }) sources."brace-expansion-1.1.11" @@ -53918,6 +54120,7 @@ in (sources."compression-1.7.3" // { dependencies = [ sources."bytes-3.0.0" + sources."debug-2.6.9" ]; }) sources."concat-map-0.0.1" @@ -53925,11 +54128,11 @@ in sources."content-type-1.0.4" sources."cookie-0.3.1" sources."cookie-signature-1.0.6" - sources."cookies-0.7.2" + sources."cookies-0.7.3" sources."core-util-is-1.0.2" sources."crypt3-0.2.0" sources."dashdash-1.14.1" - sources."debug-2.6.9" + sources."debug-3.1.0" sources."delayed-stream-1.0.0" sources."depd-1.1.2" sources."destroy-1.0.4" @@ -53945,25 +54148,25 @@ in sources."ecc-jsbn-0.1.2" sources."ee-first-1.1.1" sources."encodeurl-1.0.2" - sources."entities-1.1.1" + sources."entities-1.1.2" sources."es6-shim-0.21.1" sources."escape-html-1.0.3" sources."escape-string-regexp-1.0.5" sources."esprima-4.0.1" sources."etag-1.8.1" - sources."express-5.0.0-alpha.6" + sources."express-5.0.0-alpha.7" sources."express-json5-0.1.0" sources."extend-3.0.2" sources."extsprintf-1.3.0" sources."fast-deep-equal-1.1.0" sources."fast-json-stable-stringify-2.0.0" - sources."finalhandler-1.0.6" - sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { + (sources."finalhandler-1.1.1" // { dependencies = [ - sources."combined-stream-1.0.6" + sources."debug-2.6.9" ]; }) + sources."forever-agent-0.6.1" + sources."form-data-2.3.3" sources."forwarded-0.1.2" sources."fresh-0.5.2" sources."fs-ext-0.6.0" @@ -53978,14 +54181,13 @@ in sources."har-validator-5.1.0" sources."has-flag-3.0.0" sources."highlight.js-8.9.1" - (sources."htmlparser2-3.9.2" // { + (sources."htmlparser2-3.10.0" // { dependencies = [ - sources."readable-stream-2.3.6" + sources."readable-stream-3.0.6" ]; }) (sources."http-errors-1.7.1" // { dependencies = [ - sources."setprototypeof-1.1.0" sources."statuses-1.5.0" ]; }) @@ -53993,9 +54195,9 @@ in sources."iconv-lite-0.4.8" sources."inflight-1.0.6" sources."inherits-2.0.3" - sources."ipaddr.js-1.4.0" + sources."ipaddr.js-1.8.0" sources."is-typedarray-1.0.0" - sources."isarray-1.0.0" + sources."isarray-0.0.1" sources."isstream-0.1.2" sources."jju-1.4.0" sources."js-yaml-3.12.0" @@ -54019,9 +54221,9 @@ in sources."media-typer-0.3.0" sources."merge-descriptors-1.0.1" sources."methods-1.1.2" - sources."mime-1.3.4" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-1.4.1" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-1.0.0" sources."minimist-0.0.8" sources."mkdirp-0.5.1" @@ -54046,56 +54248,41 @@ in sources."source-map-0.6.1" ]; }) - sources."process-nextick-args-2.0.0" - sources."proxy-addr-1.1.5" + sources."proxy-addr-2.0.4" sources."psl-1.1.29" sources."punycode-1.4.1" - sources."qs-6.5.0" + sources."qs-6.5.2" sources."range-parser-1.2.0" sources."raw-body-1.3.4" (sources."readable-stream-1.1.14" // { dependencies = [ - sources."isarray-0.0.1" sources."string_decoder-0.10.31" ]; }) sources."render-readme-1.3.1" - (sources."request-2.88.0" // { - dependencies = [ - sources."qs-6.5.2" - ]; - }) + sources."request-2.88.0" sources."rimraf-2.4.5" - (sources."router-1.3.3" // { - dependencies = [ - sources."setprototypeof-1.1.0" - sources."utils-merge-1.0.1" - ]; - }) + sources."router-2.0.0-alpha.1" sources."safe-buffer-5.1.2" sources."safe-json-stringify-1.2.0" sources."safer-buffer-2.1.2" sources."sanitize-html-1.19.1" sources."semver-4.3.6" - (sources."send-0.15.6" // { + (sources."send-0.16.2" // { dependencies = [ - (sources."http-errors-1.6.3" // { - dependencies = [ - sources."statuses-1.5.0" - ]; - }) - sources."setprototypeof-1.1.0" + sources."debug-2.6.9" + sources."http-errors-1.6.3" ]; }) - sources."serve-static-1.12.6" - sources."setprototypeof-1.0.3" + sources."serve-static-1.13.2" + sources."setprototypeof-1.1.0" sources."sigmund-1.0.1" sources."sinopia-htpasswd-0.4.5" sources."source-map-0.1.43" sources."sprintf-js-1.0.3" sources."srcset-1.0.0" - sources."sshpk-1.15.1" - sources."statuses-1.3.1" + sources."sshpk-1.15.2" + sources."statuses-1.4.0" sources."string_decoder-1.1.1" sources."supports-color-5.5.0" sources."through-2.3.8" @@ -54112,7 +54299,7 @@ in }) sources."unpipe-1.0.0" sources."util-deprecate-1.0.2" - sources."utils-merge-1.0.0" + sources."utils-merge-1.0.1" sources."uuid-3.3.2" sources."vary-1.1.2" sources."verror-1.10.0" @@ -54223,7 +54410,7 @@ in sources."for-in-1.0.2" sources."fragment-cache-0.2.1" sources."get-value-2.0.6" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."graceful-readlink-1.0.1" sources."has-value-1.0.0" (sources."has-values-1.0.0" // { @@ -54521,10 +54708,10 @@ in snyk = nodeEnv.buildNodePackage { name = "snyk"; packageName = "snyk"; - version = "1.103.4"; + version = "1.108.0"; src = fetchurl { - url = "https://registry.npmjs.org/snyk/-/snyk-1.103.4.tgz"; - sha512 = "ynLlsLDjAkzymd0qi1il6f34S4oNTfIgvFCFvkYxvqfBkedfOoDQT4TLU8gi+55MGM6iornf2iefC2FW92BwnQ=="; + url = "https://registry.npmjs.org/snyk/-/snyk-1.108.0.tgz"; + sha512 = "QKeERkklW4DFyd49sqbwZ4xNYXtHOPCcUjNUzDfcvXzNwyxfRKhTf43nmPw6lnIcgBesrY95hMozos4WmgYl3w=="; }; dependencies = [ sources."@yarnpkg/lockfile-1.1.0" @@ -54599,7 +54786,7 @@ in sources."ms-2.0.0" ]; }) - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."graphlib-2.1.5" sources."has-flag-3.0.0" sources."hasbin-1.2.3" @@ -54724,20 +54911,20 @@ in sources."signal-exit-3.0.2" sources."smart-buffer-1.1.15" sources."snyk-config-2.2.0" - sources."snyk-docker-plugin-1.12.0" - sources."snyk-go-plugin-1.5.2" + sources."snyk-docker-plugin-1.12.1" + sources."snyk-go-plugin-1.6.0" sources."snyk-gradle-plugin-2.1.0" - sources."snyk-module-1.8.2" + sources."snyk-module-1.9.1" sources."snyk-mvn-plugin-2.0.0" - (sources."snyk-nodejs-lockfile-parser-1.5.3" // { + (sources."snyk-nodejs-lockfile-parser-1.7.0" // { dependencies = [ sources."lodash-4.17.10" ]; }) sources."snyk-nuget-plugin-1.6.5" sources."snyk-php-plugin-1.5.1" - sources."snyk-policy-1.12.0" - sources."snyk-python-plugin-1.8.2" + sources."snyk-policy-1.13.1" + sources."snyk-python-plugin-1.9.0" sources."snyk-resolve-1.0.1" sources."snyk-resolve-deps-4.0.2" sources."snyk-sbt-plugin-2.0.0" @@ -54826,22 +55013,22 @@ in sources."base64-arraybuffer-0.1.5" sources."base64id-1.0.0" sources."better-assert-1.0.2" - sources."blob-0.0.4" + sources."blob-0.0.5" sources."callsite-1.0.0" sources."component-bind-1.0.0" sources."component-emitter-1.2.1" sources."component-inherit-0.0.3" sources."cookie-0.3.1" sources."debug-3.1.0" - sources."engine.io-3.2.0" + sources."engine.io-3.2.1" sources."engine.io-client-3.2.1" - sources."engine.io-parser-2.1.2" + sources."engine.io-parser-2.1.3" sources."has-binary2-1.0.3" sources."has-cors-1.1.0" sources."indexof-0.0.1" sources."isarray-2.0.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."ms-2.0.0" sources."negotiator-0.6.1" sources."object-component-0.0.3" @@ -55000,11 +55187,11 @@ in sources."boolbase-1.0.0" sources."coa-2.0.1" sources."colors-1.1.2" - sources."css-select-2.0.0" - sources."css-select-base-adapter-0.1.0" + sources."css-select-2.0.2" + sources."css-select-base-adapter-0.1.1" sources."css-tree-1.0.0-alpha.28" sources."css-url-regex-1.1.0" - sources."css-what-2.1.0" + sources."css-what-2.1.2" (sources."csso-3.5.1" // { dependencies = [ sources."css-tree-1.0.0-alpha.29" @@ -55018,7 +55205,7 @@ in }) sources."domelementtype-1.3.0" sources."domutils-1.7.0" - sources."entities-1.1.1" + sources."entities-1.1.2" sources."es-abstract-1.12.0" sources."es-to-primitive-1.2.0" sources."esprima-4.0.1" @@ -55033,7 +55220,7 @@ in sources."mdn-data-1.1.4" sources."minimist-0.0.8" sources."mkdirp-0.5.1" - sources."nth-check-1.0.1" + sources."nth-check-1.0.2" sources."object-keys-1.0.12" sources."object.getownpropertydescriptors-2.0.3" sources."object.values-1.0.4" @@ -55153,7 +55340,7 @@ in sources."collection-visit-1.0.0" sources."color-convert-1.9.3" sources."color-name-1.1.3" - sources."combined-stream-1.0.6" + sources."combined-stream-1.0.7" sources."commander-2.19.0" sources."component-emitter-1.2.1" sources."concat-map-0.0.1" @@ -55239,7 +55426,7 @@ in sources."finalhandler-1.1.0" sources."flatmap-stream-0.1.1" sources."for-in-1.0.2" - sources."form-data-2.3.2" + sources."form-data-2.3.3" sources."formidable-1.2.1" sources."fragment-cache-0.2.1" sources."fresh-0.5.2" @@ -55257,7 +55444,7 @@ in }) sources."global-dirs-0.1.1" sources."got-6.7.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" (sources."graphlib-2.1.5" // { dependencies = [ sources."lodash-4.17.11" @@ -55386,8 +55573,8 @@ in sources."methods-1.1.2" sources."micromatch-3.1.10" sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mixin-deep-1.3.1" @@ -55410,7 +55597,7 @@ in sources."nan-2.11.1" sources."nanomatch-1.2.13" sources."native-promise-only-0.8.1" - (sources."nodemon-1.18.4" // { + (sources."nodemon-1.18.6" // { dependencies = [ sources."debug-3.2.6" sources."ms-2.1.1" @@ -55673,7 +55860,7 @@ in sources."valid-url-1.0.9" sources."validator-10.8.0" sources."which-1.3.1" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" sources."wordwrap-0.0.3" sources."wrappy-1.0.2" sources."write-file-atomic-2.3.0" @@ -55709,7 +55896,7 @@ in sources."errno-0.1.7" sources."fs.realpath-1.0.0" sources."glob-7.1.3" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."inflight-1.0.6" sources."inherits-2.0.3" sources."isarray-1.0.0" @@ -55740,10 +55927,10 @@ in three = nodeEnv.buildNodePackage { name = "three"; packageName = "three"; - version = "0.97.0"; + version = "0.98.0"; src = fetchurl { - url = "https://registry.npmjs.org/three/-/three-0.97.0.tgz"; - sha512 = "ctZF79O1R2aMIDnz9cV5GUIONyFnYvfQKg4+EAwEVaEr1mgy99rglstH6hhRdIThu3SOa4Ns5da/Ee5fTbWc9A=="; + url = "https://registry.npmjs.org/three/-/three-0.98.0.tgz"; + sha512 = "fihjYVjCmQbI03zt1+YCl/m+UrZCcDHFNLexgqBOIdPwnO6PYkQaYUsIbqtvNNse+BiMeu+pQWzZn9/NSnIv6A=="; }; buildInputs = globalBuildInputs; meta = { @@ -55812,16 +55999,12 @@ in ]; }) sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fs-extra-7.0.0" sources."getpass-0.1.7" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" - sources."har-validator-5.0.3" + sources."har-validator-5.1.0" sources."http-signature-1.2.0" sources."humanize-0.0.9" sources."is-typedarray-1.0.0" @@ -55835,23 +56018,30 @@ in sources."keypress-0.2.1" sources."lodash-4.17.11" sources."longjohn-0.2.12" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimist-0.0.10" sources."moment-2.22.2" - (sources."node-appc-0.2.48" // { + (sources."node-appc-0.2.49" // { dependencies = [ - sources."fs-extra-6.0.1" + sources."request-2.88.0" ]; }) - sources."oauth-sign-0.8.2" + sources."oauth-sign-0.9.0" sources."optimist-0.6.1" sources."os-tmpdir-1.0.2" sources."performance-now-2.1.0" sources."pkginfo-0.3.1" + sources."psl-1.1.29" sources."punycode-1.4.1" sources."qs-6.5.2" - sources."request-2.87.0" + (sources."request-2.87.0" // { + dependencies = [ + sources."har-validator-5.0.3" + sources."oauth-sign-0.8.2" + sources."tough-cookie-2.3.4" + ]; + }) sources."rimraf-2.2.8" sources."safe-buffer-5.1.2" sources."safer-buffer-2.1.2" @@ -55859,10 +56049,10 @@ in sources."source-map-0.6.1" sources."source-map-support-0.5.9" sources."sprintf-0.1.5" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."stack-trace-0.0.10" sources."temp-0.8.3" - sources."tough-cookie-2.3.4" + sources."tough-cookie-2.4.3" sources."tunnel-agent-0.6.0" sources."tweetnacl-0.14.5" sources."uglify-js-3.4.9" @@ -56070,13 +56260,35 @@ in production = true; bypassCache = true; }; + ttf2eot = nodeEnv.buildNodePackage { + name = "ttf2eot"; + packageName = "ttf2eot"; + version = "2.0.0"; + src = fetchurl { + url = "https://registry.npmjs.org/ttf2eot/-/ttf2eot-2.0.0.tgz"; + sha1 = "8e6337a585abd1608a0c84958ab483ce69f6654b"; + }; + dependencies = [ + sources."argparse-1.0.10" + sources."microbuffer-1.0.0" + sources."sprintf-js-1.0.3" + ]; + buildInputs = globalBuildInputs; + meta = { + description = "Convert TTF font to EOT"; + homepage = "https://github.com/fontello/ttf2eot#readme"; + license = "MIT"; + }; + production = true; + bypassCache = true; + }; typescript = nodeEnv.buildNodePackage { name = "typescript"; packageName = "typescript"; - version = "3.1.3"; + version = "3.1.6"; src = fetchurl { - url = "https://registry.npmjs.org/typescript/-/typescript-3.1.3.tgz"; - sha512 = "+81MUSyX+BaSo+u2RbozuQk/UWx6hfG0a5gHu4ANEM4sU96XbuIyAB+rWBW1u70c6a5QuZfuYICn3s2UjuHUpA=="; + url = "https://registry.npmjs.org/typescript/-/typescript-3.1.6.tgz"; + sha512 = "tDMYfVtvpb96msS1lDX9MEdHrW4yOuZ4Kdc4Him9oU796XldPYF/t2+uKoX0BBa0hXXwDlqYQbXY5Rzjzc5hBA=="; }; buildInputs = globalBuildInputs; meta = { @@ -56128,7 +56340,7 @@ in sources."color-convert-1.9.3" sources."color-name-1.1.3" sources."columnify-1.5.4" - sources."combined-stream-1.0.6" + sources."combined-stream-1.0.7" sources."concat-map-0.0.1" sources."concat-stream-1.6.2" sources."configstore-3.1.2" @@ -56149,14 +56361,14 @@ in sources."execa-0.7.0" sources."exit-hook-1.1.1" sources."extend-3.0.2" - sources."form-data-2.3.2" + sources."form-data-2.3.3" sources."fs.realpath-1.0.0" sources."function-bind-1.1.1" sources."get-stream-3.0.0" sources."glob-7.1.3" sources."global-dirs-0.1.1" sources."got-6.7.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-1.0.3" sources."has-ansi-2.0.0" sources."has-flag-3.0.0" @@ -56199,8 +56411,8 @@ in sources."make-dir-1.3.0" sources."make-error-1.3.5" sources."make-error-cause-1.2.2" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-1.2.0" (sources."mkdirp-0.5.1" // { @@ -56286,7 +56498,7 @@ in sources."util-deprecate-1.0.2" sources."wcwidth-1.0.1" sources."which-1.3.1" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" sources."wordwrap-1.0.0" sources."wrappy-1.0.2" sources."write-file-atomic-2.3.0" @@ -56328,10 +56540,10 @@ in ungit = nodeEnv.buildNodePackage { name = "ungit"; packageName = "ungit"; - version = "1.4.34"; + version = "1.4.36"; src = fetchurl { - url = "https://registry.npmjs.org/ungit/-/ungit-1.4.34.tgz"; - sha512 = "7sgDDNaWakL7tzp5NwENWHV0SekB6LzcW99nVv0CLthggQnw7wWDnSFAz9iHbBINNj14Sh3gscO7nd73qBtlgA=="; + url = "https://registry.npmjs.org/ungit/-/ungit-1.4.36.tgz"; + sha512 = "Tpr9qHQZX/e4Qhz4dg1c5Y/jOs911E2MengusvNxO9+kxaw3ua/j+U0FCcPdg4vTDFtEydCGli3kJCoiEbK48w=="; }; dependencies = [ sources."abbrev-1.1.1" @@ -56362,7 +56574,7 @@ in sources."base64id-1.0.0" sources."bcrypt-pbkdf-1.0.2" sources."better-assert-1.0.2" - sources."blob-0.0.4" + sources."blob-0.0.5" sources."bluebird-3.5.2" sources."blueimp-md5-2.10.0" sources."body-parser-1.18.3" @@ -56434,7 +56646,7 @@ in sources."editions-2.0.2" sources."ee-first-1.1.1" sources."encodeurl-1.0.2" - (sources."engine.io-3.2.0" // { + (sources."engine.io-3.2.1" // { dependencies = [ sources."debug-3.1.0" ]; @@ -56445,7 +56657,7 @@ in sources."debug-3.1.0" ]; }) - sources."engine.io-parser-2.1.2" + sources."engine.io-parser-2.1.3" (sources."errlop-1.0.3" // { dependencies = [ sources."editions-1.3.4" @@ -56493,7 +56705,7 @@ in sources."getmac-1.4.6" sources."getpass-0.1.7" sources."glob-7.1.3" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-schema-2.0.0" sources."har-validator-5.1.0" (sources."has-binary2-1.0.3" // { @@ -56513,7 +56725,7 @@ in sources."http-errors-1.6.3" sources."http-signature-1.2.0" sources."iconv-lite-0.4.23" - sources."ignore-5.0.2" + sources."ignore-5.0.4" sources."indexof-0.0.1" sources."inflight-1.0.6" sources."inherits-2.0.3" @@ -56562,8 +56774,8 @@ in sources."merge-descriptors-1.0.1" sources."methods-1.1.2" sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" @@ -56634,11 +56846,7 @@ in sources."combined-stream-1.0.7" sources."delayed-stream-1.0.0" sources."extend-3.0.2" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" ]; }) sources."require-directory-2.1.1" @@ -56685,8 +56893,8 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" - sources."sshpk-1.15.1" + sources."spdx-license-ids-3.0.2" + sources."sshpk-1.15.2" sources."ssri-5.3.0" sources."stack-trace-0.0.10" sources."statuses-1.5.0" @@ -56697,12 +56905,12 @@ in sources."strip-json-comments-2.0.1" (sources."superagent-4.0.0-beta.5" // { dependencies = [ - sources."combined-stream-1.0.6" + sources."combined-stream-1.0.7" sources."component-emitter-1.2.1" sources."cookiejar-2.1.2" sources."debug-4.1.0" sources."delayed-stream-1.0.0" - sources."form-data-2.3.2" + sources."form-data-2.3.3" sources."formidable-1.2.1" sources."mime-2.3.1" sources."ms-2.1.1" @@ -56871,11 +57079,7 @@ in sources."filename-reserved-regex-2.0.0" sources."filenamify-2.1.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fs-constants-1.0.0" sources."fs-extra-0.26.7" sources."fs.realpath-1.0.0" @@ -56885,7 +57089,7 @@ in sources."git-clone-0.1.0" sources."glob-7.1.3" sources."got-6.7.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."graceful-readlink-1.0.1" sources."gray-matter-2.1.1" sources."handlebars-4.0.12" @@ -56946,8 +57150,8 @@ in sources."supports-color-2.0.0" ]; }) - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-0.0.8" @@ -56998,7 +57202,7 @@ in sources."signal-exit-3.0.2" sources."source-map-0.6.1" sources."sprintf-js-1.0.3" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" sources."stat-mode-0.2.2" sources."string-width-2.1.1" sources."string_decoder-1.1.1" @@ -57057,19 +57261,18 @@ in "@vue/cli" = nodeEnv.buildNodePackage { name = "_at_vue_slash_cli"; packageName = "@vue/cli"; - version = "3.0.5"; + version = "3.1.1"; src = fetchurl { - url = "https://registry.npmjs.org/@vue/cli/-/cli-3.0.5.tgz"; - sha512 = "wNwK6oosaMY5gCmzONatVAVLf8dMmpGqxoT1Z6ne0aBRg6gOUZ+XrLN6MiF34tlETvQ/XhHUC5d+YVWoBVlllQ=="; + url = "https://registry.npmjs.org/@vue/cli/-/cli-3.1.1.tgz"; + sha512 = "FUL6sBmg50/1Y5GtOxMeFniqkpDCXBm2rlVgL+64eN+N9qIOKMZDAtfTy/F/d3TUn9Bc1lvPO6/6Xm9m68TnEg=="; }; dependencies = [ sources."@akryum/winattr-3.0.0" sources."@apollographql/apollo-upload-server-5.0.3" - sources."@apollographql/graphql-playground-html-1.6.0" - sources."@babel/runtime-7.1.2" + sources."@apollographql/graphql-playground-html-1.6.4" sources."@babel/runtime-corejs2-7.1.2" sources."@mrmlnc/readdir-enhanced-2.2.1" - sources."@nodelib/fs.stat-1.1.2" + sources."@nodelib/fs.stat-1.1.3" sources."@protobufjs/aspromise-1.1.2" sources."@protobufjs/base64-1.1.2" sources."@protobufjs/codegen-2.0.4" @@ -57081,7 +57284,7 @@ in sources."@protobufjs/pool-1.1.0" sources."@protobufjs/utf8-1.1.0" sources."@types/accepts-1.3.5" - sources."@types/async-2.0.49" + sources."@types/async-2.0.50" sources."@types/body-parser-1.17.0" sources."@types/connect-3.4.32" sources."@types/cors-2.8.4" @@ -57090,30 +57293,32 @@ in sources."@types/express-serve-static-core-4.16.0" sources."@types/long-4.0.0" sources."@types/mime-2.0.0" - sources."@types/node-10.11.7" + sources."@types/node-10.12.2" sources."@types/range-parser-1.2.2" sources."@types/serve-static-1.13.2" sources."@types/ws-5.1.2" sources."@types/zen-observable-0.8.0" - sources."@vue/cli-shared-utils-3.0.5" - (sources."@vue/cli-ui-3.0.5" // { + sources."@vue/cli-shared-utils-3.1.1" + (sources."@vue/cli-ui-3.1.1" // { dependencies = [ sources."clone-2.1.2" ]; }) - sources."@vue/cli-ui-addon-webpack-3.0.5" + sources."@vue/cli-ui-addon-webpack-3.1.1" + sources."@vue/cli-ui-addon-widgets-3.1.1" sources."abbrev-1.1.1" sources."accepts-1.3.5" + sources."aggregate-error-1.0.0" sources."ajv-5.5.2" sources."ansi-align-2.0.0" sources."ansi-escapes-3.1.0" sources."ansi-regex-3.0.0" sources."ansi-styles-3.2.1" sources."anymatch-2.0.0" - sources."apollo-cache-1.1.17" + sources."apollo-cache-1.1.20" sources."apollo-cache-control-0.2.5" - sources."apollo-cache-inmemory-1.3.5" - sources."apollo-client-2.4.2" + sources."apollo-cache-inmemory-1.3.9" + sources."apollo-client-2.4.5" sources."apollo-datasource-0.1.3" sources."apollo-engine-reporting-0.0.6" sources."apollo-engine-reporting-protobuf-0.0.1" @@ -57138,8 +57343,8 @@ in ]; }) sources."apollo-tracing-0.2.5" - sources."apollo-upload-client-8.1.0" - sources."apollo-utilities-1.0.21" + sources."apollo-upload-client-9.1.0" + sources."apollo-utilities-1.0.25" sources."argparse-1.0.10" sources."arr-diff-4.0.0" sources."arr-flatten-1.1.0" @@ -57174,13 +57379,7 @@ in sources."base64-js-0.0.8" sources."bcrypt-pbkdf-1.0.2" sources."binary-extensions-1.12.0" - (sources."bl-1.2.2" // { - dependencies = [ - sources."isarray-1.0.0" - sources."readable-stream-2.3.6" - sources."string_decoder-1.1.1" - ]; - }) + sources."bl-1.2.2" (sources."body-parser-1.18.3" // { dependencies = [ sources."debug-2.6.9" @@ -57189,18 +57388,20 @@ in sources."boxen-1.3.0" sources."brace-expansion-1.1.11" sources."braces-2.3.2" - (sources."buffer-3.6.0" // { - dependencies = [ - sources."isarray-1.0.0" - ]; - }) + sources."buffer-3.6.0" sources."buffer-alloc-1.2.0" sources."buffer-alloc-unsafe-1.1.0" sources."buffer-crc32-0.2.13" sources."buffer-fill-1.0.0" sources."buffer-from-1.1.1" sources."builtins-1.0.3" - sources."busboy-0.2.14" + (sources."busboy-0.2.14" // { + dependencies = [ + sources."isarray-0.0.1" + sources."readable-stream-1.1.14" + sources."string_decoder-0.10.31" + ]; + }) sources."bytes-3.0.0" sources."cache-base-1.0.1" sources."call-me-maybe-1.0.1" @@ -57229,6 +57430,7 @@ in sources."kind-of-5.1.0" ]; }) + sources."clean-stack-1.3.0" sources."cli-boxes-1.0.0" sources."cli-cursor-2.1.0" sources."cli-spinners-1.3.1" @@ -57253,10 +57455,12 @@ in sources."copy-descriptor-0.1.1" sources."core-js-2.5.7" sources."core-util-is-1.0.2" - sources."cors-2.8.4" + sources."cors-2.8.5" sources."create-error-class-3.0.2" - sources."cross-spawn-5.1.0" + sources."cross-spawn-6.0.5" + sources."cross-spawn-async-2.2.5" sources."crypto-random-string-1.0.0" + sources."csv-parser-1.12.1" sources."dashdash-1.14.1" (sources."debug-3.2.6" // { dependencies = [ @@ -57293,7 +57497,13 @@ in sources."depd-1.1.2" sources."deprecated-decorator-0.1.6" sources."destroy-1.0.4" - sources."dicer-0.2.5" + (sources."dicer-0.2.5" // { + dependencies = [ + sources."isarray-0.0.1" + sources."readable-stream-1.1.14" + sources."string_decoder-0.10.31" + ]; + }) sources."diff-3.5.0" sources."dir-glob-2.0.0" sources."dot-prop-4.2.0" @@ -57311,6 +57521,7 @@ in sources."ejs-2.6.1" sources."encodeurl-1.0.2" sources."end-of-stream-1.4.1" + sources."entities-1.1.2" sources."es-abstract-1.12.0" sources."es-to-primitive-1.2.0" sources."escape-html-1.0.3" @@ -57322,9 +57533,9 @@ in sources."event-stream-3.3.6" sources."eventemitter3-3.1.0" sources."exec-sh-0.2.2" - (sources."execa-0.10.0" // { + (sources."execa-1.0.0" // { dependencies = [ - sources."cross-spawn-6.0.5" + sources."get-stream-4.1.0" ]; }) (sources."expand-brackets-2.1.4" // { @@ -57365,12 +57576,11 @@ in sources."define-property-1.0.0" ]; }) - sources."extract-files-3.1.0" + sources."extract-files-4.1.0" sources."extsprintf-1.3.0" sources."fast-deep-equal-1.1.0" sources."fast-glob-2.2.3" sources."fast-json-stable-stringify-2.0.0" - sources."fclone-1.0.11" sources."fd-slicer-1.1.0" sources."figures-2.0.0" sources."file-type-5.2.0" @@ -57383,18 +57593,20 @@ in sources."statuses-1.4.0" ]; }) - sources."flatmap-stream-0.1.1" - sources."for-in-1.0.2" - sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { + (sources."fkill-5.3.0" // { dependencies = [ - sources."combined-stream-1.0.6" + sources."execa-0.10.0" ]; }) + sources."flatmap-stream-0.1.1" + sources."for-in-1.0.2" + sources."forever-agent-0.6.1" + sources."form-data-2.3.3" sources."forwarded-0.1.2" sources."fragment-cache-0.2.1" sources."fresh-0.5.2" sources."from-0.1.7" + sources."from2-2.3.0" sources."fs-constants-1.0.0" sources."fs-exists-sync-0.1.0" sources."fs-extra-6.0.1" @@ -57402,6 +57614,8 @@ in sources."fsevents-1.2.4" sources."fswin-2.17.1227" sources."function-bind-1.1.1" + sources."generate-function-1.1.0" + sources."generate-object-property-1.2.0" sources."get-proxy-2.1.0" sources."get-stream-3.0.0" sources."get-value-2.0.6" @@ -57423,10 +57637,10 @@ in }) sources."good-listener-1.2.2" sources."got-6.7.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."graceful-readlink-1.0.1" - sources."graphql-0.13.2" - sources."graphql-anywhere-4.1.19" + sources."graphql-14.0.2" + sources."graphql-anywhere-4.1.22" sources."graphql-extensions-0.2.1" sources."graphql-subscriptions-1.0.0" sources."graphql-tag-2.10.0" @@ -57455,14 +57669,16 @@ in sources."ieee754-1.1.12" sources."ignore-3.3.10" sources."ignore-by-default-1.0.1" - sources."immutable-tuple-0.4.8" + sources."immutable-tuple-0.4.9" sources."import-global-0.1.0" sources."import-lazy-2.1.0" sources."imurmurhash-0.1.4" + sources."indent-string-3.2.0" sources."inflight-1.0.6" sources."inherits-2.0.3" sources."ini-1.3.5" sources."inquirer-6.2.0" + sources."into-stream-2.0.1" sources."ipaddr.js-1.8.0" sources."is-accessor-descriptor-1.0.0" sources."is-binary-path-1.0.1" @@ -57489,6 +57705,7 @@ in sources."is-path-inside-1.0.1" sources."is-plain-object-2.0.4" sources."is-promise-2.1.0" + sources."is-property-1.0.2" sources."is-redirect-1.0.0" sources."is-regex-1.0.4" sources."is-retry-allowed-1.1.0" @@ -57497,9 +57714,9 @@ in sources."is-typedarray-1.0.0" sources."is-windows-1.0.2" sources."is-wsl-1.1.0" - sources."isarray-0.0.1" + sources."isarray-1.0.0" sources."isbinaryfile-3.0.3" - sources."isemail-3.1.3" + sources."isemail-3.2.0" sources."isexe-2.0.0" sources."isobject-3.0.1" sources."isstream-0.1.2" @@ -57536,7 +57753,7 @@ in sources."map-stream-0.0.7" sources."map-visit-1.0.0" sources."media-typer-0.3.0" - sources."merge-1.2.0" + sources."merge-1.2.1" sources."merge-descriptors-1.0.1" sources."merge2-1.2.3" sources."methods-1.1.2" @@ -57547,8 +57764,8 @@ in ]; }) sources."mime-1.4.1" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."minimalistic-assert-1.0.1" sources."minimatch-3.0.4" @@ -57566,19 +57783,25 @@ in sources."ms-2.0.0" sources."mute-stream-0.0.7" sources."nan-2.11.1" - sources."nanoid-1.3.0" + sources."nanoid-2.0.0" (sources."nanomatch-1.2.13" // { dependencies = [ sources."extend-shallow-3.0.2" sources."is-extendable-1.0.1" ]; }) + sources."ndjson-1.5.0" + (sources."neat-csv-2.1.0" // { + dependencies = [ + sources."get-stream-2.3.1" + ]; + }) sources."negotiator-0.6.1" sources."nice-try-1.0.5" - sources."node-fetch-2.2.0" + sources."node-fetch-2.2.1" sources."node-ipc-9.1.1" - sources."node-notifier-5.2.1" - sources."nodemon-1.18.4" + sources."node-notifier-5.3.0" + sources."nodemon-1.18.6" sources."nopt-1.0.10" sources."normalize-path-2.1.1" sources."npm-conf-1.1.3" @@ -57607,7 +57830,7 @@ in sources."once-1.4.0" sources."onetime-2.0.1" sources."opn-5.4.0" - sources."optimism-0.6.6" + sources."optimism-0.6.8" sources."ora-2.1.0" sources."os-tmpdir-1.0.2" sources."p-finally-1.0.0" @@ -57626,10 +57849,16 @@ in sources."pause-stream-0.0.11" sources."pend-1.2.0" sources."performance-now-2.1.0" + (sources."pid-from-port-1.1.3" // { + dependencies = [ + sources."cross-spawn-5.1.0" + sources."execa-0.9.0" + ]; + }) sources."pify-3.0.0" sources."pinkie-2.0.4" sources."pinkie-promise-2.0.1" - (sources."portfinder-1.0.17" // { + (sources."portfinder-1.0.19" // { dependencies = [ sources."debug-2.6.9" ]; @@ -57638,27 +57867,24 @@ in sources."prepend-http-1.0.4" sources."prismjs-1.15.0" sources."private-0.1.8" + sources."process-exists-3.1.0" sources."process-nextick-args-2.0.0" sources."proto-list-1.2.4" sources."protobufjs-6.8.8" sources."proxy-addr-2.0.4" + sources."ps-list-4.1.0" sources."ps-tree-1.1.0" sources."pseudomap-1.0.2" sources."psl-1.1.29" sources."pstree.remy-1.1.0" + sources."pump-3.0.0" sources."punycode-2.1.1" sources."qs-6.5.2" sources."range-parser-1.2.0" sources."raw-body-2.3.3" sources."rc-1.2.8" - sources."readable-stream-1.1.14" - (sources."readdirp-2.2.1" // { - dependencies = [ - sources."isarray-1.0.0" - sources."readable-stream-2.3.6" - sources."string_decoder-1.1.1" - ]; - }) + sources."readable-stream-2.3.6" + sources."readdirp-2.2.1" (sources."recast-0.15.5" // { dependencies = [ sources."source-map-0.6.1" @@ -57685,11 +57911,14 @@ in sources."ret-0.1.15" sources."retry-0.12.0" sources."rimraf-2.6.2" + sources."rss-parser-3.5.3" sources."run-async-2.3.0" sources."rxjs-6.3.3" sources."safe-buffer-5.1.2" sources."safe-regex-1.1.0" sources."safer-buffer-2.1.2" + sources."sax-1.2.4" + sources."sec-1.0.0" (sources."seek-bzip-1.0.5" // { dependencies = [ sources."commander-2.8.1" @@ -57711,7 +57940,7 @@ in sources."shebang-regex-1.0.0" sources."shell-quote-1.6.1" sources."shellwords-0.1.1" - sources."shortid-2.2.13" + sources."shortid-2.2.14" sources."signal-exit-3.0.2" sources."slash-2.0.0" (sources."snapdragon-0.8.2" // { @@ -57757,8 +57986,9 @@ in sources."is-extendable-1.0.1" ]; }) + sources."split2-2.2.0" sources."sprintf-js-1.0.3" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" (sources."static-extend-0.1.2" // { dependencies = [ sources."define-property-0.2.5" @@ -57783,7 +58013,7 @@ in sources."streamsearch-0.1.2" sources."string-width-2.1.1" sources."string.prototype.padstart-3.0.0" - sources."string_decoder-0.10.31" + sources."string_decoder-1.1.1" sources."strip-ansi-4.0.0" sources."strip-dirs-2.1.0" sources."strip-eof-1.0.0" @@ -57792,20 +58022,26 @@ in sources."subscriptions-transport-ws-0.9.15" sources."supports-color-5.5.0" sources."symbol-observable-1.2.0" - (sources."tar-stream-1.6.2" // { + sources."tar-stream-1.6.2" + (sources."taskkill-2.0.0" // { dependencies = [ - sources."isarray-1.0.0" - sources."readable-stream-2.3.6" - sources."string_decoder-1.1.1" + sources."execa-0.1.1" + ]; + }) + (sources."tasklist-3.1.1" // { + dependencies = [ + sources."pify-2.3.0" ]; }) (sources."term-size-1.2.0" // { dependencies = [ + sources."cross-spawn-5.1.0" sources."execa-0.7.0" ]; }) sources."terminate-2.1.0" sources."through-2.3.8" + sources."through2-2.0.3" sources."timed-out-4.0.1" sources."tiny-emitter-2.0.2" sources."tmp-0.0.33" @@ -57822,7 +58058,11 @@ in ]; }) sources."to-regex-range-2.1.1" - sources."topo-3.0.0" + (sources."topo-3.0.3" // { + dependencies = [ + sources."hoek-6.0.1" + ]; + }) sources."touch-3.1.0" (sources."tough-cookie-2.4.3" // { dependencies = [ @@ -57857,7 +58097,6 @@ in ]; }) sources."has-values-0.1.4" - sources."isarray-1.0.0" ]; }) sources."unzip-response-2.0.1" @@ -57874,15 +58113,17 @@ in sources."validate-npm-package-name-3.0.0" sources."vary-1.1.2" sources."verror-1.10.0" - sources."vue-cli-plugin-apollo-0.16.6" + sources."vue-cli-plugin-apollo-0.17.3" sources."watch-1.0.2" sources."wcwidth-1.0.1" sources."which-1.3.1" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" sources."wrappy-1.0.2" sources."write-file-atomic-2.3.0" sources."ws-5.2.2" sources."xdg-basedir-3.0.0" + sources."xml2js-0.4.19" + sources."xmlbuilder-9.0.7" sources."xtend-4.0.1" sources."yallist-2.1.2" (sources."yaml-front-matter-3.4.1" // { @@ -57892,7 +58133,7 @@ in }) sources."yauzl-2.10.0" sources."yn-2.0.0" - sources."zen-observable-0.8.9" + sources."zen-observable-0.8.11" sources."zen-observable-ts-0.8.10" ]; buildInputs = globalBuildInputs; @@ -57907,30 +58148,30 @@ in "@webassemblyjs/cli" = nodeEnv.buildNodePackage { name = "_at_webassemblyjs_slash_cli"; packageName = "@webassemblyjs/cli"; - version = "1.7.8"; + version = "1.7.11"; src = fetchurl { - url = "https://registry.npmjs.org/@webassemblyjs/cli/-/cli-1.7.8.tgz"; - sha512 = "/zEE5vL2lVlZVv3XYLo6+yeEU5pqi8AByBWBVYSuPSRBu0bY9cTCRU4exS/Jd7bdbF9I3s1Moa1FRG1wCQErfA=="; + url = "https://registry.npmjs.org/@webassemblyjs/cli/-/cli-1.7.11.tgz"; + sha512 = "j2KPAIyvXa6fuOr5bQEEb8UHF7WCbEguia5BMJotgxNo37LA/1c4Do/rxFornYKkcmf5IOLjDr197SMUlys3+g=="; }; dependencies = [ - sources."@webassemblyjs/ast-1.7.8" - sources."@webassemblyjs/floating-point-hex-parser-1.7.8" - sources."@webassemblyjs/helper-api-error-1.7.8" - sources."@webassemblyjs/helper-code-frame-1.7.8" - sources."@webassemblyjs/helper-flaten-ast-1.7.8" - sources."@webassemblyjs/helper-fsm-1.7.8" - sources."@webassemblyjs/helper-module-context-1.7.8" - sources."@webassemblyjs/helper-wasm-bytecode-1.7.8" - sources."@webassemblyjs/ieee754-1.7.8" - sources."@webassemblyjs/leb128-1.7.8" - sources."@webassemblyjs/utf8-1.7.8" - sources."@webassemblyjs/validation-1.7.8" - sources."@webassemblyjs/wasm-parser-1.7.8" - sources."@webassemblyjs/wast-parser-1.7.8" - sources."@webassemblyjs/wast-printer-1.7.8" + sources."@webassemblyjs/ast-1.7.11" + sources."@webassemblyjs/floating-point-hex-parser-1.7.11" + sources."@webassemblyjs/helper-api-error-1.7.11" + sources."@webassemblyjs/helper-code-frame-1.7.11" + sources."@webassemblyjs/helper-flaten-ast-1.7.11" + sources."@webassemblyjs/helper-fsm-1.7.11" + sources."@webassemblyjs/helper-module-context-1.7.11" + sources."@webassemblyjs/helper-wasm-bytecode-1.7.11" + sources."@webassemblyjs/ieee754-1.7.11" + sources."@webassemblyjs/leb128-1.7.11" + sources."@webassemblyjs/utf8-1.7.11" + sources."@webassemblyjs/validation-1.7.11" + sources."@webassemblyjs/wasm-parser-1.7.11" + sources."@webassemblyjs/wast-parser-1.7.11" + sources."@webassemblyjs/wast-printer-1.7.11" sources."@xtuc/ieee754-1.2.0" sources."@xtuc/long-4.2.1" - sources."webassemblyjs-1.7.8" + sources."webassemblyjs-1.7.11" ]; buildInputs = globalBuildInputs; meta = { @@ -57943,30 +58184,30 @@ in "@webassemblyjs/repl" = nodeEnv.buildNodePackage { name = "_at_webassemblyjs_slash_repl"; packageName = "@webassemblyjs/repl"; - version = "1.7.8"; + version = "1.7.11"; src = fetchurl { - url = "https://registry.npmjs.org/@webassemblyjs/repl/-/repl-1.7.8.tgz"; - sha512 = "IClmDKT+XgTiJ3lNaaXbHBAt2LqabugJmsabtF8TIlulG5Y5NEOOeJGjm56/rmwuW3/ul/zvaLQ1pFpU3WEIXg=="; + url = "https://registry.npmjs.org/@webassemblyjs/repl/-/repl-1.7.11.tgz"; + sha512 = "rU4ikGGLw6rXQtYLzAvy3GDGpf/0FhKLmVUc3uQJbMQwDvW6FT8kp7sUiZYCwr/UECUurjj2fnGu4FDuIi2Iqg=="; }; dependencies = [ - sources."@webassemblyjs/ast-1.7.8" - sources."@webassemblyjs/floating-point-hex-parser-1.7.8" - sources."@webassemblyjs/helper-api-error-1.7.8" - sources."@webassemblyjs/helper-code-frame-1.7.8" - sources."@webassemblyjs/helper-flaten-ast-1.7.8" - sources."@webassemblyjs/helper-fsm-1.7.8" - sources."@webassemblyjs/helper-module-context-1.7.8" - sources."@webassemblyjs/helper-wasm-bytecode-1.7.8" - sources."@webassemblyjs/ieee754-1.7.8" - sources."@webassemblyjs/leb128-1.7.8" - sources."@webassemblyjs/utf8-1.7.8" - sources."@webassemblyjs/validation-1.7.8" - sources."@webassemblyjs/wasm-parser-1.7.8" - sources."@webassemblyjs/wast-parser-1.7.8" - sources."@webassemblyjs/wast-printer-1.7.8" + sources."@webassemblyjs/ast-1.7.11" + sources."@webassemblyjs/floating-point-hex-parser-1.7.11" + sources."@webassemblyjs/helper-api-error-1.7.11" + sources."@webassemblyjs/helper-code-frame-1.7.11" + sources."@webassemblyjs/helper-flaten-ast-1.7.11" + sources."@webassemblyjs/helper-fsm-1.7.11" + sources."@webassemblyjs/helper-module-context-1.7.11" + sources."@webassemblyjs/helper-wasm-bytecode-1.7.11" + sources."@webassemblyjs/ieee754-1.7.11" + sources."@webassemblyjs/leb128-1.7.11" + sources."@webassemblyjs/utf8-1.7.11" + sources."@webassemblyjs/validation-1.7.11" + sources."@webassemblyjs/wasm-parser-1.7.11" + sources."@webassemblyjs/wast-parser-1.7.11" + sources."@webassemblyjs/wast-printer-1.7.11" sources."@xtuc/ieee754-1.2.0" sources."@xtuc/long-4.2.1" - sources."webassemblyjs-1.7.8" + sources."webassemblyjs-1.7.11" ]; buildInputs = globalBuildInputs; meta = { @@ -57979,28 +58220,28 @@ in "@webassemblyjs/wasm-strip" = nodeEnv.buildNodePackage { name = "_at_webassemblyjs_slash_wasm-strip"; packageName = "@webassemblyjs/wasm-strip"; - version = "1.7.8"; + version = "1.7.11"; src = fetchurl { - url = "https://registry.npmjs.org/@webassemblyjs/wasm-strip/-/wasm-strip-1.7.8.tgz"; - sha512 = "ZhPzbEX3UKaLjJ7hjPVjNG3tNjiD7B8eriTR11yrctdyD5vAOVoyrUEsBPX0WadxDOzOsGZmSbFD1SHBjJT8jQ=="; + url = "https://registry.npmjs.org/@webassemblyjs/wasm-strip/-/wasm-strip-1.7.11.tgz"; + sha512 = "mHlWMZuNz/Or8GHH38HhMQ7O4m9N4XpVjL3I+oQ6emVyJqHvvgybn76lTaI8mKaEh3e4EmaUeIC9gknEhdaJVA=="; }; dependencies = [ - sources."@webassemblyjs/ast-1.7.8" - sources."@webassemblyjs/floating-point-hex-parser-1.7.8" - sources."@webassemblyjs/helper-api-error-1.7.8" - sources."@webassemblyjs/helper-buffer-1.7.8" - sources."@webassemblyjs/helper-code-frame-1.7.8" - sources."@webassemblyjs/helper-fsm-1.7.8" - sources."@webassemblyjs/helper-module-context-1.7.8" - sources."@webassemblyjs/helper-wasm-bytecode-1.7.8" - sources."@webassemblyjs/helper-wasm-section-1.7.8" - sources."@webassemblyjs/ieee754-1.7.8" - sources."@webassemblyjs/leb128-1.7.8" - sources."@webassemblyjs/utf8-1.7.8" - sources."@webassemblyjs/wasm-gen-1.7.8" - sources."@webassemblyjs/wasm-parser-1.7.8" - sources."@webassemblyjs/wast-parser-1.7.8" - sources."@webassemblyjs/wast-printer-1.7.8" + sources."@webassemblyjs/ast-1.7.11" + sources."@webassemblyjs/floating-point-hex-parser-1.7.11" + sources."@webassemblyjs/helper-api-error-1.7.11" + sources."@webassemblyjs/helper-buffer-1.7.11" + sources."@webassemblyjs/helper-code-frame-1.7.11" + sources."@webassemblyjs/helper-fsm-1.7.11" + sources."@webassemblyjs/helper-module-context-1.7.11" + sources."@webassemblyjs/helper-wasm-bytecode-1.7.11" + sources."@webassemblyjs/helper-wasm-section-1.7.11" + sources."@webassemblyjs/ieee754-1.7.11" + sources."@webassemblyjs/leb128-1.7.11" + sources."@webassemblyjs/utf8-1.7.11" + sources."@webassemblyjs/wasm-gen-1.7.11" + sources."@webassemblyjs/wasm-parser-1.7.11" + sources."@webassemblyjs/wast-parser-1.7.11" + sources."@webassemblyjs/wast-printer-1.7.11" sources."@xtuc/ieee754-1.2.0" sources."@xtuc/long-4.2.1" ]; @@ -58015,10 +58256,10 @@ in "@webassemblyjs/wasm-text-gen" = nodeEnv.buildNodePackage { name = "_at_webassemblyjs_slash_wasm-text-gen"; packageName = "@webassemblyjs/wasm-text-gen"; - version = "1.7.8"; + version = "1.7.11"; src = fetchurl { - url = "https://registry.npmjs.org/@webassemblyjs/wasm-text-gen/-/wasm-text-gen-1.7.8.tgz"; - sha512 = "cDzQh/rniwchQfzGQriAg7Io2xqEu5s1Po29jMkRfJse4OFbh54aWcbKk2DO0ph+9lbNQZ0VYTPBP5NGIKqNmw=="; + url = "https://registry.npmjs.org/@webassemblyjs/wasm-text-gen/-/wasm-text-gen-1.7.11.tgz"; + sha512 = "hU3q8os4NyVxC0QpDcaPyUqsfL3aMw4vjIxhw83QbBUo/nJxqn7hQ5tcB/YiHpUxASrlEAt5dcuIupdto84DZA=="; }; dependencies = [ sources."@babel/code-frame-7.0.0" @@ -58027,19 +58268,19 @@ in sources."@babel/parser-7.1.3" sources."@babel/template-7.1.2" sources."@babel/types-7.1.3" - sources."@webassemblyjs/ast-1.7.8" - sources."@webassemblyjs/floating-point-hex-parser-1.7.8" - sources."@webassemblyjs/helper-api-error-1.7.8" - sources."@webassemblyjs/helper-code-frame-1.7.8" - sources."@webassemblyjs/helper-fsm-1.7.8" - sources."@webassemblyjs/helper-module-context-1.7.8" - sources."@webassemblyjs/helper-wasm-bytecode-1.7.8" - sources."@webassemblyjs/ieee754-1.7.8" - sources."@webassemblyjs/leb128-1.7.8" - sources."@webassemblyjs/utf8-1.7.8" - sources."@webassemblyjs/wasm-parser-1.7.8" - sources."@webassemblyjs/wast-parser-1.7.8" - sources."@webassemblyjs/wast-printer-1.7.8" + sources."@webassemblyjs/ast-1.7.11" + sources."@webassemblyjs/floating-point-hex-parser-1.7.11" + sources."@webassemblyjs/helper-api-error-1.7.11" + sources."@webassemblyjs/helper-code-frame-1.7.11" + sources."@webassemblyjs/helper-fsm-1.7.11" + sources."@webassemblyjs/helper-module-context-1.7.11" + sources."@webassemblyjs/helper-wasm-bytecode-1.7.11" + sources."@webassemblyjs/ieee754-1.7.11" + sources."@webassemblyjs/leb128-1.7.11" + sources."@webassemblyjs/utf8-1.7.11" + sources."@webassemblyjs/wasm-parser-1.7.11" + sources."@webassemblyjs/wast-parser-1.7.11" + sources."@webassemblyjs/wast-printer-1.7.11" sources."@xtuc/ieee754-1.2.0" sources."@xtuc/long-4.2.1" sources."ansi-styles-3.2.1" @@ -58069,21 +58310,21 @@ in "@webassemblyjs/wast-refmt" = nodeEnv.buildNodePackage { name = "_at_webassemblyjs_slash_wast-refmt"; packageName = "@webassemblyjs/wast-refmt"; - version = "1.7.8"; + version = "1.7.11"; src = fetchurl { - url = "https://registry.npmjs.org/@webassemblyjs/wast-refmt/-/wast-refmt-1.7.8.tgz"; - sha512 = "eSkc1/NnfbMYQP/DQaC2W0/DEY/TO4reAS/F/v2cnafFMBrwJ8xQCQwr9IAMiez1aKKYZmL4kyRRbU/0Q9Qbtg=="; + url = "https://registry.npmjs.org/@webassemblyjs/wast-refmt/-/wast-refmt-1.7.11.tgz"; + sha512 = "o5PX9iAsVyEjt5HptTCyHPctSs3J17l33bGSSOejqEZpdRbKqPF3+5AXbBflU4eDOEU1daKqbVq4bRAYcH6dfg=="; }; dependencies = [ - sources."@webassemblyjs/ast-1.7.8" - sources."@webassemblyjs/floating-point-hex-parser-1.7.8" - sources."@webassemblyjs/helper-api-error-1.7.8" - sources."@webassemblyjs/helper-code-frame-1.7.8" - sources."@webassemblyjs/helper-fsm-1.7.8" - sources."@webassemblyjs/helper-module-context-1.7.8" - sources."@webassemblyjs/helper-wasm-bytecode-1.7.8" - sources."@webassemblyjs/wast-parser-1.7.8" - sources."@webassemblyjs/wast-printer-1.7.8" + sources."@webassemblyjs/ast-1.7.11" + sources."@webassemblyjs/floating-point-hex-parser-1.7.11" + sources."@webassemblyjs/helper-api-error-1.7.11" + sources."@webassemblyjs/helper-code-frame-1.7.11" + sources."@webassemblyjs/helper-fsm-1.7.11" + sources."@webassemblyjs/helper-module-context-1.7.11" + sources."@webassemblyjs/helper-wasm-bytecode-1.7.11" + sources."@webassemblyjs/wast-parser-1.7.11" + sources."@webassemblyjs/wast-printer-1.7.11" sources."@xtuc/long-4.2.1" ]; buildInputs = globalBuildInputs; @@ -58159,7 +58400,7 @@ in ]; }) sources."glob-7.1.3" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."har-validator-2.0.6" sources."has-ansi-2.0.0" sources."hasha-2.2.0" @@ -58190,8 +58431,8 @@ in sources."kew-0.1.7" sources."klaw-1.3.1" sources."lodash-4.17.11" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."minimatch-3.0.4" sources."minimist-0.0.8" sources."mkdirp-0.3.5" @@ -58222,7 +58463,7 @@ in sources."safer-buffer-2.1.2" sources."semver-2.3.2" sources."sntp-1.0.9" - (sources."sshpk-1.15.1" // { + (sources."sshpk-1.15.2" // { dependencies = [ sources."assert-plus-1.0.0" ]; @@ -58261,35 +58502,35 @@ in webpack = nodeEnv.buildNodePackage { name = "webpack"; packageName = "webpack"; - version = "4.20.2"; + version = "4.25.1"; src = fetchurl { - url = "https://registry.npmjs.org/webpack/-/webpack-4.20.2.tgz"; - sha512 = "75WFUMblcWYcocjSLlXCb71QuGyH7egdBZu50FtBGl2Nso8CK3Ej+J7bTZz2FPFq5l6fzCisD9modB7t30ikuA=="; + url = "https://registry.npmjs.org/webpack/-/webpack-4.25.1.tgz"; + sha512 = "T0GU/3NRtO4tMfNzsvpdhUr8HnzA4LTdP2zd+e5zd6CdOH5vNKHnAlO+DvzccfhPdzqRrALOFcjYxx7K5DWmvA=="; }; dependencies = [ - sources."@webassemblyjs/ast-1.7.8" - sources."@webassemblyjs/floating-point-hex-parser-1.7.8" - sources."@webassemblyjs/helper-api-error-1.7.8" - sources."@webassemblyjs/helper-buffer-1.7.8" - sources."@webassemblyjs/helper-code-frame-1.7.8" - sources."@webassemblyjs/helper-fsm-1.7.8" - sources."@webassemblyjs/helper-module-context-1.7.8" - sources."@webassemblyjs/helper-wasm-bytecode-1.7.8" - sources."@webassemblyjs/helper-wasm-section-1.7.8" - sources."@webassemblyjs/ieee754-1.7.8" - sources."@webassemblyjs/leb128-1.7.8" - sources."@webassemblyjs/utf8-1.7.8" - sources."@webassemblyjs/wasm-edit-1.7.8" - sources."@webassemblyjs/wasm-gen-1.7.8" - sources."@webassemblyjs/wasm-opt-1.7.8" - sources."@webassemblyjs/wasm-parser-1.7.8" - sources."@webassemblyjs/wast-parser-1.7.8" - sources."@webassemblyjs/wast-printer-1.7.8" + sources."@webassemblyjs/ast-1.7.11" + sources."@webassemblyjs/floating-point-hex-parser-1.7.11" + sources."@webassemblyjs/helper-api-error-1.7.11" + sources."@webassemblyjs/helper-buffer-1.7.11" + sources."@webassemblyjs/helper-code-frame-1.7.11" + sources."@webassemblyjs/helper-fsm-1.7.11" + sources."@webassemblyjs/helper-module-context-1.7.11" + sources."@webassemblyjs/helper-wasm-bytecode-1.7.11" + sources."@webassemblyjs/helper-wasm-section-1.7.11" + sources."@webassemblyjs/ieee754-1.7.11" + sources."@webassemblyjs/leb128-1.7.11" + sources."@webassemblyjs/utf8-1.7.11" + sources."@webassemblyjs/wasm-edit-1.7.11" + sources."@webassemblyjs/wasm-gen-1.7.11" + sources."@webassemblyjs/wasm-opt-1.7.11" + sources."@webassemblyjs/wasm-parser-1.7.11" + sources."@webassemblyjs/wast-parser-1.7.11" + sources."@webassemblyjs/wast-printer-1.7.11" sources."@xtuc/ieee754-1.2.0" sources."@xtuc/long-4.2.1" sources."acorn-5.7.3" sources."acorn-dynamic-import-3.0.0" - sources."ajv-6.5.4" + sources."ajv-6.5.5" sources."ajv-keywords-3.2.0" sources."anymatch-2.0.0" sources."aproba-1.2.0" @@ -58444,7 +58685,7 @@ in sources."is-glob-3.1.0" ]; }) - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."has-value-1.0.0" (sources."has-values-1.0.0" // { dependencies = [ @@ -58820,7 +59061,7 @@ in sources."flatten-1.0.2" (sources."fs-chunk-store-1.7.0" // { dependencies = [ - sources."thunky-1.0.2" + sources."thunky-1.0.3" ]; }) sources."fs.realpath-1.0.0" @@ -58882,7 +59123,7 @@ in sources."ms-2.0.0" (sources."multicast-dns-6.2.3" // { dependencies = [ - sources."thunky-1.0.2" + sources."thunky-1.0.3" ]; }) (sources."multistream-2.1.1" // { @@ -59030,7 +59271,7 @@ in dependencies = [ sources."@cliqz-oss/firefox-client-0.3.1" sources."@cliqz-oss/node-firefox-connect-1.2.1" - sources."@types/node-10.11.7" + sources."@types/node-10.12.2" sources."@yarnpkg/lockfile-1.1.0" sources."JSONSelect-0.2.1" sources."abbrev-1.1.1" @@ -59074,9 +59315,14 @@ in (sources."archiver-2.1.1" // { dependencies = [ sources."async-2.6.1" + sources."readable-stream-2.3.6" + ]; + }) + (sources."archiver-utils-1.3.0" // { + dependencies = [ + sources."readable-stream-2.3.6" ]; }) - sources."archiver-utils-1.3.0" sources."archy-1.0.0" sources."argparse-1.0.10" sources."arr-diff-4.0.0" @@ -59135,7 +59381,11 @@ in sources."base64-js-1.3.0" sources."bcrypt-pbkdf-1.0.2" sources."binary-extensions-1.12.0" - sources."bl-1.2.2" + (sources."bl-1.2.2" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."bluebird-2.9.34" sources."boolbase-1.0.0" sources."boxen-1.3.0" @@ -59210,22 +59460,34 @@ in sources."commander-2.19.0" sources."common-tags-1.8.0" sources."component-emitter-1.2.1" - sources."compress-commons-1.2.2" + (sources."compress-commons-1.2.2" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."concat-map-0.0.1" - sources."concat-stream-1.6.2" + (sources."concat-stream-1.6.2" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."configstore-3.1.2" sources."convert-source-map-1.6.0" sources."copy-descriptor-0.1.1" sources."core-js-2.5.7" sources."core-util-is-1.0.2" sources."crc-3.8.0" - sources."crc32-stream-2.0.0" + (sources."crc32-stream-2.0.0" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."create-error-class-3.0.2" sources."cross-spawn-6.0.5" sources."crx-parser-0.1.2" sources."crypto-random-string-1.0.0" sources."css-select-1.2.0" - sources."css-what-2.1.0" + sources."css-what-2.1.2" sources."d-1.0.0" sources."dashdash-1.14.1" sources."data-uri-to-buffer-1.2.0" @@ -59275,7 +59537,7 @@ in sources."email-validator-2.0.4" sources."encoding-0.1.12" sources."end-of-stream-1.4.1" - sources."entities-1.1.1" + sources."entities-1.1.2" sources."error-ex-1.3.2" sources."es-abstract-1.12.0" sources."es-to-primitive-1.2.0" @@ -59407,18 +59669,18 @@ in sources."async-2.5.0" ]; }) - sources."first-chunk-stream-2.0.0" + (sources."first-chunk-stream-2.0.0" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."flat-cache-1.3.0" sources."flatstr-1.0.8" sources."fluent-syntax-0.7.0" sources."for-in-1.0.2" sources."for-own-1.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fragment-cache-0.2.1" sources."fs-constants-1.0.0" sources."fs-extra-4.0.3" @@ -59445,12 +59707,17 @@ in sources."generate-object-property-1.2.0" sources."get-caller-file-1.0.3" sources."get-stream-3.0.0" - sources."get-uri-2.0.2" + (sources."get-uri-2.0.2" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."get-value-2.0.6" sources."getpass-0.1.7" sources."gettext-parser-1.1.0" (sources."git-rev-sync-1.9.1" // { dependencies = [ + sources."graceful-fs-4.1.11" sources."shelljs-0.7.7" ]; }) @@ -59464,7 +59731,7 @@ in sources."globals-9.18.0" sources."globby-5.0.0" sources."got-6.7.1" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."graceful-readlink-1.0.1" sources."graphlib-2.1.5" sources."growly-1.3.0" @@ -59494,7 +59761,7 @@ in }) sources."home-or-tmp-2.0.0" sources."hosted-git-info-2.7.1" - sources."htmlparser2-3.9.2" + sources."htmlparser2-3.10.0" sources."http-errors-1.6.3" (sources."http-proxy-agent-2.1.0" // { dependencies = [ @@ -59624,7 +59891,11 @@ in sources."kind-of-3.2.2" sources."latest-version-3.1.0" sources."lazy-cache-0.2.7" - sources."lazystream-1.0.0" + (sources."lazystream-1.0.0" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."lcid-2.0.0" sources."levn-0.3.0" sources."lie-3.1.1" @@ -59669,8 +59940,8 @@ in sources."kind-of-6.0.2" ]; }) - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."minimatch-3.0.4" sources."minimist-1.2.0" @@ -59740,7 +60011,7 @@ in sources."normalize-package-data-2.4.0" sources."normalize-path-2.1.1" sources."npm-run-path-2.0.2" - sources."nth-check-1.0.1" + sources."nth-check-1.0.2" sources."number-is-nan-1.0.1" sources."oauth-sign-0.9.0" sources."object-assign-4.1.1" @@ -59817,7 +60088,7 @@ in sources."probe-image-size-4.0.0" sources."process-0.11.10" sources."process-nextick-args-2.0.0" - sources."progress-2.0.0" + sources."progress-2.0.1" sources."promise-7.3.1" (sources."proxy-agent-2.3.1" // { dependencies = [ @@ -59831,7 +60102,7 @@ in sources."pump-3.0.0" sources."punycode-2.1.1" sources."qs-6.5.2" - sources."quick-format-unescaped-3.0.0" + sources."quick-format-unescaped-3.0.1" (sources."raw-body-2.3.3" // { dependencies = [ sources."iconv-lite-0.4.23" @@ -59845,8 +60116,12 @@ in sources."path-exists-2.1.0" ]; }) - sources."readable-stream-2.3.6" - sources."readdirp-2.2.1" + sources."readable-stream-3.0.6" + (sources."readdirp-2.2.1" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) (sources."readline2-1.0.1" // { dependencies = [ sources."mute-stream-0.0.5" @@ -59958,7 +60233,7 @@ in ]; }) sources."snapdragon-util-3.0.1" - (sources."snyk-1.103.4" // { + (sources."snyk-1.108.0" // { dependencies = [ sources."ansi-regex-3.0.0" sources."ansi-styles-3.2.1" @@ -59979,22 +60254,22 @@ in sources."ms-2.1.1" ]; }) - (sources."snyk-docker-plugin-1.12.0" // { + (sources."snyk-docker-plugin-1.12.1" // { dependencies = [ sources."debug-3.2.6" sources."ms-2.1.1" ]; }) - sources."snyk-go-plugin-1.5.2" + sources."snyk-go-plugin-1.6.0" sources."snyk-gradle-plugin-2.1.0" - (sources."snyk-module-1.8.2" // { + (sources."snyk-module-1.9.1" // { dependencies = [ sources."debug-3.2.6" sources."ms-2.1.1" ]; }) sources."snyk-mvn-plugin-2.0.0" - (sources."snyk-nodejs-lockfile-parser-1.5.3" // { + (sources."snyk-nodejs-lockfile-parser-1.7.0" // { dependencies = [ sources."lodash-4.17.10" sources."source-map-0.6.1" @@ -60013,13 +60288,14 @@ in sources."ms-2.1.1" ]; }) - (sources."snyk-policy-1.12.0" // { + (sources."snyk-policy-1.13.1" // { dependencies = [ sources."debug-3.2.6" sources."ms-2.1.1" + sources."semver-5.6.0" ]; }) - sources."snyk-python-plugin-1.8.2" + sources."snyk-python-plugin-1.9.0" (sources."snyk-resolve-1.0.1" // { dependencies = [ sources."debug-3.2.6" @@ -60056,11 +60332,11 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" + sources."spdx-license-ids-3.0.2" sources."split-0.3.3" sources."split-string-3.1.0" sources."sprintf-js-1.0.3" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" (sources."static-extend-0.1.2" // { dependencies = [ sources."define-property-0.2.5" @@ -60105,7 +60381,11 @@ in sources."supports-color-2.0.0" sources."symbol-observable-1.0.1" sources."table-4.0.3" - sources."tar-stream-1.6.2" + (sources."tar-stream-1.6.2" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) sources."temp-dir-1.0.0" sources."tempfile-2.0.0" (sources."term-size-1.2.0" // { @@ -60183,7 +60463,7 @@ in sources."when-3.7.7" sources."which-1.3.1" sources."which-module-2.0.0" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" sources."win-release-1.1.1" sources."window-size-0.1.4" sources."winreg-0.0.12" @@ -60226,7 +60506,11 @@ in sources."jszip-2.6.1" ]; }) - sources."zip-stream-1.2.0" + (sources."zip-stream-1.2.0" // { + dependencies = [ + sources."readable-stream-2.3.6" + ]; + }) ]; buildInputs = globalBuildInputs; meta = { @@ -60257,10 +60541,10 @@ in yarn = nodeEnv.buildNodePackage { name = "yarn"; packageName = "yarn"; - version = "1.10.1"; + version = "1.12.1"; src = fetchurl { - url = "https://registry.npmjs.org/yarn/-/yarn-1.10.1.tgz"; - sha512 = "EH0H1fyfFxkE4UpG4b+VCaVY4I488I2EyQNmGjGGKmvsSIb0G3b+1IcfGYPI2gqa1du43g4ZA3jH8fXlq6oVxg=="; + url = "https://registry.npmjs.org/yarn/-/yarn-1.12.1.tgz"; + sha512 = "vdVLrYWx73k4QR8ZpQQ3HJg/X8aAunjUHuPlADR/ogmZOhnqgAdETPz0e/Df+MW8Dno7F1dOxS5e3G6niobumw=="; }; buildInputs = globalBuildInputs; meta = { @@ -60281,7 +60565,7 @@ in }; dependencies = [ sources."@mrmlnc/readdir-enhanced-2.2.1" - sources."@nodelib/fs.stat-1.1.2" + sources."@nodelib/fs.stat-1.1.3" sources."@sindresorhus/is-0.7.0" sources."aggregate-error-1.0.0" sources."ajv-5.5.2" @@ -60477,11 +60761,7 @@ in sources."for-in-1.0.2" sources."foreachasync-3.0.0" sources."forever-agent-0.6.1" - (sources."form-data-2.3.2" // { - dependencies = [ - sources."combined-stream-1.0.6" - ]; - }) + sources."form-data-2.3.3" sources."fragment-cache-0.2.1" sources."from2-2.3.0" sources."fs.realpath-1.0.0" @@ -60502,7 +60782,7 @@ in sources."global-tunnel-ng-2.6.0" sources."globby-8.0.1" sources."got-8.3.2" - sources."graceful-fs-4.1.11" + sources."graceful-fs-4.1.15" sources."grouped-queue-0.3.3" sources."har-schema-2.0.0" sources."har-validator-5.1.0" @@ -60634,8 +60914,8 @@ in }) sources."merge2-1.2.3" sources."micromatch-3.1.10" - sources."mime-db-1.36.0" - sources."mime-types-2.1.20" + sources."mime-db-1.37.0" + sources."mime-types-2.1.21" sources."mimic-fn-1.2.0" sources."mimic-response-1.0.1" sources."minimatch-3.0.4" @@ -60833,9 +61113,9 @@ in sources."spdx-correct-3.0.2" sources."spdx-exceptions-2.2.0" sources."spdx-expression-parse-3.0.0" - sources."spdx-license-ids-3.0.1" + sources."spdx-license-ids-3.0.2" sources."split-string-3.1.0" - sources."sshpk-1.15.1" + sources."sshpk-1.15.2" (sources."static-extend-0.1.2" // { dependencies = [ sources."define-property-0.2.5" @@ -60959,7 +61239,7 @@ in }) sources."walk-2.3.14" sources."which-1.3.1" - sources."widest-line-2.0.0" + sources."widest-line-2.0.1" sources."win-release-1.1.1" (sources."wrap-ansi-2.1.0" // { dependencies = [ @@ -60981,7 +61261,7 @@ in ]; }) sources."yeoman-doctor-3.0.2" - (sources."yeoman-environment-2.3.3" // { + (sources."yeoman-environment-2.3.4" // { dependencies = [ sources."debug-3.2.6" sources."ms-2.1.1" diff --git a/pkgs/development/ocaml-modules/fmt/default.nix b/pkgs/development/ocaml-modules/fmt/default.nix index 2e7996f55d9d..2aa560e5349b 100644 --- a/pkgs/development/ocaml-modules/fmt/default.nix +++ b/pkgs/development/ocaml-modules/fmt/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, ocaml, findlib, ocamlbuild, topkg, cmdliner, result, uchar }: stdenv.mkDerivation { - name = "ocaml${ocaml.version}-fmt-0.8.4"; + name = "ocaml${ocaml.version}-fmt-0.8.5"; src = fetchurl { - url = http://erratique.ch/software/fmt/releases/fmt-0.8.4.tbz; - sha256 = "1qilsbisqqhmn8b1ar9lvjbgz8vf4gmqwqjnnjzgld2a3gmh8qvv"; + url = http://erratique.ch/software/fmt/releases/fmt-0.8.5.tbz; + sha256 = "1zj9azcxcn6skmb69ykgmi9z8c50yskwg03wqgh87lypgjdcz060"; }; unpackCmd = "tar xjf $src"; diff --git a/pkgs/development/ocaml-modules/menhir/default.nix b/pkgs/development/ocaml-modules/menhir/default.nix index 2a101da74d55..ce9ddeea0c43 100644 --- a/pkgs/development/ocaml-modules/menhir/default.nix +++ b/pkgs/development/ocaml-modules/menhir/default.nix @@ -1,12 +1,14 @@ { stdenv, fetchurl, ocaml, findlib, ocamlbuild -, version ? if stdenv.lib.versionAtLeast (stdenv.lib.getVersion ocaml) "4.02" then "20170712" else "20140422" +, version ? if stdenv.lib.versionAtLeast (stdenv.lib.getVersion ocaml) "4.02" then "20181026" else "20140422" }@args: let - sha256 = - if version == "20140422" then "1ki1f2id6a14h9xpv2k8yb6px7dyw8cvwh39csyzj4qpzx7wia0d" - else if version == "20170712" then "006hq3bwj81j67f2k9cgzj5wr4hai8j36925p5n3sd2j01ljsj6a" - else throw ("menhir: unknown version " ++ version); + src = fetchurl ( + if version == "20140422" then { url = "http://cristal.inria.fr/~fpottier/menhir/menhir-20140422.tar.gz"; sha256 = "1ki1f2id6a14h9xpv2k8yb6px7dyw8cvwh39csyzj4qpzx7wia0d"; } + else if version == "20170712" then { url = "http://gallium.inria.fr/~fpottier/menhir/menhir-20170712.tar.gz"; sha256 = "006hq3bwj81j67f2k9cgzj5wr4hai8j36925p5n3sd2j01ljsj6a"; } + else if version == "20181026" then { url = "https://gitlab.inria.fr/fpottier/menhir/repository/20181026/archive.tar.gz"; sha256 = "1zhacw60996i9b88kbnfvrvjk3ps9p9n9syjk9np545jp8l0582g"; } + else throw ("menhir: unknown version " ++ version) + ); in -import ./generic.nix (args // { inherit version sha256; }) +import ./generic.nix (args // { inherit version src; }) diff --git a/pkgs/development/ocaml-modules/menhir/generic.nix b/pkgs/development/ocaml-modules/menhir/generic.nix index d52da82d6d76..bac6cd707940 100644 --- a/pkgs/development/ocaml-modules/menhir/generic.nix +++ b/pkgs/development/ocaml-modules/menhir/generic.nix @@ -1,12 +1,9 @@ -{ version, sha256, stdenv, fetchurl, ocaml, findlib, ocamlbuild }: +{ version, src, stdenv, fetchurl, ocaml, findlib, ocamlbuild }: stdenv.mkDerivation { name = "menhir-${version}"; - src = fetchurl { - url = "http://pauillac.inria.fr/~fpottier/menhir/menhir-${version}.tar.gz"; - inherit sha256; - }; + inherit src; buildInputs = [ ocaml findlib ocamlbuild ]; diff --git a/pkgs/development/ocaml-modules/ocaml-migrate-parsetree/default.nix b/pkgs/development/ocaml-modules/ocaml-migrate-parsetree/default.nix index 131f478d32ed..e8074a51e52f 100644 --- a/pkgs/development/ocaml-modules/ocaml-migrate-parsetree/default.nix +++ b/pkgs/development/ocaml-modules/ocaml-migrate-parsetree/default.nix @@ -6,13 +6,13 @@ else stdenv.mkDerivation rec { name = "ocaml${ocaml.version}-ocaml-migrate-parsetree-${version}"; - version = "1.0.11"; + version = "1.1.0"; src = fetchFromGitHub { owner = "ocaml-ppx"; repo = "ocaml-migrate-parsetree"; rev = "v${version}"; - sha256 = "05kbgs9n1x64fk6g3wbjnwjd17w10k3k8dzglnc45xg4hr7z651n"; + sha256 = "1d2n349d1cqm3dr09mwy5m9rfd4bkkqvri5i94wknpsrr35vnrr1"; }; buildInputs = [ ocaml findlib ocamlbuild dune ]; diff --git a/pkgs/development/ocaml-modules/odoc/default.nix b/pkgs/development/ocaml-modules/odoc/default.nix index 3b1005106272..ef91b110c7ce 100644 --- a/pkgs/development/ocaml-modules/odoc/default.nix +++ b/pkgs/development/ocaml-modules/odoc/default.nix @@ -1,22 +1,18 @@ -{ stdenv, fetchFromGitHub, ocaml, findlib, dune -, bos, cmdliner, doc-ock-html, doc-ock-xml +{ stdenv, fetchFromGitHub, ocaml, findlib, dune, cppo +, bos, cmdliner, tyxml }: stdenv.mkDerivation rec { name = "ocaml${ocaml.version}-odoc-${version}"; - version = "1.2.0"; + version = "1.3.0"; src = fetchFromGitHub { owner = "ocaml"; repo = "odoc"; - rev = "v${version}"; - sha256 = "0ixnhfpm1nw4bvjj8qhcyy283pdr5acqpg5wxwq3n1l4mad79cgh"; + rev = version; + sha256 = "0hjan5aj5zk8j8qyagv9r4hqm469mh207cv2m6kxwgnw0c3cz7sy"; }; - buildInputs = [ ocaml findlib dune cmdliner ]; - - propagatedBuildInputs = [ bos doc-ock-html doc-ock-xml ]; - - configurePhase = "ocaml bin/set-etc bin/odoc_etc.ml $out/etc/odoc"; + buildInputs = [ ocaml findlib dune cppo bos cmdliner tyxml ]; inherit (dune) installPhase; diff --git a/pkgs/development/python-modules/aioh2/default.nix b/pkgs/development/python-modules/aioh2/default.nix new file mode 100644 index 000000000000..fdeb5fb0082e --- /dev/null +++ b/pkgs/development/python-modules/aioh2/default.nix @@ -0,0 +1,23 @@ +{ lib, buildPythonPackage, isPy3k, fetchPypi, h2, priority }: + +buildPythonPackage rec { + pname = "aioh2"; + version = "0.2.2"; + disabled = !isPy3k; + + src = fetchPypi { + inherit pname version; + sha256 = "03i24wzpw0mrnrpck3w6qy83iigwl7n99sdrndqzxfyrc69b99wd"; + }; + + propagatedBuildInputs = [ h2 priority ]; + + doCheck = false; # https://github.com/decentfox/aioh2/issues/17 + + meta = with lib; { + homepage = https://github.com/decentfox/aioh2; + description = "HTTP/2 implementation with hyper-h2 on Python 3 asyncio"; + license = licenses.bsd3; + maintainers = [ maintainers.qyliss ]; + }; +} diff --git a/pkgs/development/python-modules/aiohttp-remotes/default.nix b/pkgs/development/python-modules/aiohttp-remotes/default.nix new file mode 100644 index 000000000000..51120d07121c --- /dev/null +++ b/pkgs/development/python-modules/aiohttp-remotes/default.nix @@ -0,0 +1,34 @@ +{ lib, fetchpatch, buildPythonPackage, fetchPypi +, aiohttp, pytest, pytestcov, pytest-aiohttp +}: + +buildPythonPackage rec { + pname = "aiohttp_remotes"; + version = "0.1.2"; + + src = fetchPypi { + inherit pname version; + sha256 = "43c3f7e1c5ba27f29fb4dbde5d43b900b5b5fc7e37bf7e35e6eaedabaec4a3fc"; + }; + + patches = [ + (fetchpatch { + url = https://github.com/aio-libs/aiohttp-remotes/commit/188772abcea038c31dae7d607e487eeed44391bc.patch; + sha256 = "0pb1y4jb8ar1szhnjiyj2sdmdk6z9h6c3wrxw59nv9kr3if5igvs"; + }) + ]; + + propagatedBuildInputs = [ aiohttp ]; + + checkInputs = [ pytest pytestcov pytest-aiohttp ]; + checkPhase = '' + python -m pytest + ''; + + meta = with lib; { + homepage = https://github.com/wikibusiness/aiohttp-remotes; + description = "A set of useful tools for aiohttp.web server"; + license = licenses.mit; + maintainers = [ maintainers.qyliss ]; + }; +} diff --git a/pkgs/development/python-modules/aioprocessing/default.nix b/pkgs/development/python-modules/aioprocessing/default.nix new file mode 100644 index 000000000000..f2f959112688 --- /dev/null +++ b/pkgs/development/python-modules/aioprocessing/default.nix @@ -0,0 +1,26 @@ +{ lib +, buildPythonPackage +, fetchPypi +, pythonAtLeast +}: + +buildPythonPackage rec { + pname = "aioprocessing"; + version = "1.0.1"; + disabled = !(pythonAtLeast "3.4"); + + src = fetchPypi { + inherit pname version; + sha256 = "1yq1gfsky2kjimwdmzqk893sp6387vbl4bw0sbha5hl6cm3jp5dn"; + }; + + # Tests aren't included in pypi package + doCheck = false; + + meta = { + description = "A library that integrates the multiprocessing module with asyncio"; + homepage = https://github.com/dano/aioprocessing; + license = lib.licenses.bsd2; + maintainers = with lib.maintainers; [ uskudnik ]; + }; +} diff --git a/pkgs/development/python-modules/atomman/default.nix b/pkgs/development/python-modules/atomman/default.nix new file mode 100644 index 000000000000..ce4408b84412 --- /dev/null +++ b/pkgs/development/python-modules/atomman/default.nix @@ -0,0 +1,40 @@ +{ stdenv +, buildPythonPackage +, fetchPypi +, xmltodict +, datamodeldict +, numpy +, matplotlib +, scipy +, pandas +, cython +, numericalunits +, pytest +}: + +buildPythonPackage rec { + version = "1.2.3"; + pname = "atomman"; + + src = fetchPypi { + inherit pname version; + sha256 = "9eb6acc5497263cfa89be8d0f383a9a69f0726b4ac6798c1b1d96f26705ec09c"; + }; + + checkInputs = [ pytest ]; + propagatedBuildInputs = [ xmltodict datamodeldict numpy matplotlib scipy pandas cython numericalunits ]; + + # tests not included with Pypi release + doCheck = false; + + checkPhase = '' + py.test tests + ''; + + meta = with stdenv.lib; { + homepage = https://github.com/usnistgov/atomman/; + description = "Atomistic Manipulation Toolkit"; + license = licenses.mit; + maintainers = [ maintainers.costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/autobahn/default.nix b/pkgs/development/python-modules/autobahn/default.nix index 4105a5d965f4..01922f98c402 100644 --- a/pkgs/development/python-modules/autobahn/default.nix +++ b/pkgs/development/python-modules/autobahn/default.nix @@ -4,11 +4,11 @@ }: buildPythonPackage rec { pname = "autobahn"; - version = "18.9.2"; + version = "18.8.2"; src = fetchPypi { inherit pname version; - sha256 = "1mhj64rsnbi6rc0hskmllw280rvd99z045p6dq8h0mw60r7r52yr"; + sha256 = "448df2e241011ea2948799918930042d81e63d26b01912c472f5a9a37f42f319"; }; propagatedBuildInputs = [ six txaio twisted zope_interface cffi ] ++ diff --git a/pkgs/development/python-modules/beancount/default.nix b/pkgs/development/python-modules/beancount/default.nix index 1a005d9e42d7..e023c721b0e6 100644 --- a/pkgs/development/python-modules/beancount/default.nix +++ b/pkgs/development/python-modules/beancount/default.nix @@ -1,7 +1,7 @@ { stdenv, buildPythonPackage, fetchPypi, isPy3k , beautifulsoup4, bottle, chardet, dateutil , google_api_python_client, lxml, ply, python_magic -, nose, requests }: +, pytest, requests }: buildPythonPackage rec { version = "2.1.3"; @@ -14,13 +14,8 @@ buildPythonPackage rec { sha256 = "4b7b0d3633c82ca88d3cb3d31ad2fd2e45a42401cfa94eaa1cb938ffece34f22"; }; - checkInputs = [ nose ]; - - # Automatic tests cannot be run because it needs to import some local modules for tests. + # No tests in archive doCheck = false; - checkPhase = '' - nosetests - ''; propagatedBuildInputs = [ beautifulsoup4 @@ -32,6 +27,9 @@ buildPythonPackage rec { ply python_magic requests + # pytest really is a runtime dependency + # https://bitbucket.org/blais/beancount/commits/554e13057551951e113835196770847c788dd592 + pytest ]; meta = { diff --git a/pkgs/development/python-modules/broadlink/default.nix b/pkgs/development/python-modules/broadlink/default.nix new file mode 100644 index 000000000000..d1ecddded776 --- /dev/null +++ b/pkgs/development/python-modules/broadlink/default.nix @@ -0,0 +1,28 @@ +{ lib, fetchPypi, buildPythonPackage +, pyaes, pycrc }: + +buildPythonPackage rec { + pname = "broadlink"; + version = "0.9"; + + src = fetchPypi { + inherit pname version; + sha256 = "10dnd859yjh1h6qrxhvkslbsj5fh5g654xsq2yqblkkv3xd711rs"; + }; + + postPatch = '' + substituteInPlace setup.py \ + --replace pyaes==1.6.0 pyaes + ''; + + propagatedBuildInputs = [ pyaes pycrc ]; + + # no tests available + doCheck = false; + + meta = with lib; { + description = "Python API for controlling Broadlink IR controllers"; + homepage = http://github.com/mjg59/python-broadlink; + license = licenses.mit; + }; +} diff --git a/pkgs/development/python-modules/bsddb3/default.nix b/pkgs/development/python-modules/bsddb3/default.nix index 971aac70ad8e..700f5b3d0c52 100644 --- a/pkgs/development/python-modules/bsddb3/default.nix +++ b/pkgs/development/python-modules/bsddb3/default.nix @@ -3,12 +3,12 @@ , fetchPypi , pkgs , isPy3k +, python }: buildPythonPackage rec { pname = "bsddb3"; version = "6.2.6"; - disabled = isPy3k; src = fetchPypi { inherit pname version; @@ -17,8 +17,9 @@ buildPythonPackage rec { buildInputs = [ pkgs.db ]; - # Judging from SyntaxError in test - doCheck = false; # test suite breaks python3 compatibility + checkPhase = '' + ${python.interpreter} test.py + ''; # Path to database need to be set. # Somehow the setup.py flag is not propagated. diff --git a/pkgs/development/python-modules/cassandra-driver/default.nix b/pkgs/development/python-modules/cassandra-driver/default.nix index 110cd1e0bd5b..c445c21478b0 100644 --- a/pkgs/development/python-modules/cassandra-driver/default.nix +++ b/pkgs/development/python-modules/cassandra-driver/default.nix @@ -20,11 +20,11 @@ buildPythonPackage rec { pname = "cassandra-driver"; - version = "3.6.0"; + version = "3.15.1"; src = fetchPypi { inherit pname version; - sha256 = "1aqmy3psn12lxgp659d0zsxkirxzy5lnbnzxf9xjq1a93s3qm704"; + sha256 = "1xcirbvlj00id8269akhk8gy2sv0mlnbgy3nagi32648jwsrcadg"; }; buildInputs = [ pkgs.libev cython ]; diff --git a/pkgs/development/python-modules/coilmq/default.nix b/pkgs/development/python-modules/coilmq/default.nix index 11d39e411ce5..90eb1edc2cda 100644 --- a/pkgs/development/python-modules/coilmq/default.nix +++ b/pkgs/development/python-modules/coilmq/default.nix @@ -1,5 +1,5 @@ { stdenv, buildPythonPackage, fetchPypi -, stompclient, pythondaemon, redis, pid, pytest, six, click, coverage +, stompclient, python-daemon, redis, pid, pytest, six, click, coverage , sqlalchemy }: buildPythonPackage rec { @@ -11,7 +11,7 @@ buildPythonPackage rec { sha256 = "4cbfeb5ed2459df14902c1380157be6267702b1271682924cd316ccad8a29d1d"; }; - propagatedBuildInputs = [ stompclient pythondaemon redis pid ]; + propagatedBuildInputs = [ stompclient python-daemon redis pid ]; buildInputs = [ pytest six click coverage sqlalchemy ]; # The teste data is not included in the distribution diff --git a/pkgs/development/python-modules/datadog/default.nix b/pkgs/development/python-modules/datadog/default.nix index 47c206fda5e8..7b15d412610a 100644 --- a/pkgs/development/python-modules/datadog/default.nix +++ b/pkgs/development/python-modules/datadog/default.nix @@ -1,18 +1,14 @@ -{ lib, buildPythonPackage, fetchFromGitHub +{ lib, buildPythonPackage, fetchPypi , decorator, requests, simplejson , nose, mock }: buildPythonPackage rec { pname = "datadog"; - version = "0.20.0"; + version = "0.23.0"; - # no tests in PyPI tarball - # https://github.com/DataDog/datadogpy/pull/259 - src = fetchFromGitHub { - owner = "DataDog"; - repo = "datadogpy"; - rev = "v${version}"; - sha256 = "1p4p14853yrsl8py4ca7za7a12qzw0xwgz64f5kzx8a6vpv3p3md"; + src = fetchPypi { + inherit pname version; + sha256 = "6ed9aec2b3a26722b74465c2ed36d2efdb9c9fac1a07a84d81fa2fc0cfa66ae4"; }; propagatedBuildInputs = [ decorator requests simplejson ]; diff --git a/pkgs/development/python-modules/datamodeldict/default.nix b/pkgs/development/python-modules/datamodeldict/default.nix new file mode 100644 index 000000000000..9aac803ccae1 --- /dev/null +++ b/pkgs/development/python-modules/datamodeldict/default.nix @@ -0,0 +1,27 @@ +{ stdenv +, buildPythonPackage +, fetchPypi +, xmltodict +}: + +buildPythonPackage rec { + version = "0.9.4"; + pname = "DataModelDict"; + + src = fetchPypi { + inherit pname version; + sha256 = "97d8e999e000cf69c48e57b1a72eb45a27d83576a38c6cd8550c230b018be7af"; + }; + + propagatedBuildInputs = [ xmltodict ]; + + # no tests + doCheck = false; + + meta = with stdenv.lib; { + homepage = https://github.com/usnistgov/DataModelDict/; + description = "Class allowing for data models equivalently represented as Python dictionaries, JSON, and XML"; + license = licenses.mit; + maintainers = [ maintainers.costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/django_classytags/default.nix b/pkgs/development/python-modules/django_classytags/default.nix index 022709bacbe0..d3ed0fd18410 100644 --- a/pkgs/development/python-modules/django_classytags/default.nix +++ b/pkgs/development/python-modules/django_classytags/default.nix @@ -6,17 +6,17 @@ buildPythonPackage rec { pname = "django-classy-tags"; - version = "0.6.1"; + version = "0.8.0"; src = fetchPypi { inherit pname version; - sha256 = "0wxvpmjdzk0aajk33y4himn3wqjx7k0aqlka9j8ay3yfav78bdq0"; + sha256 = "1f2dc9rq8v9sc4kv4x9hmbzp5c4amdxjkz5nzas5abg2s1hr2bvr"; }; propagatedBuildInputs = [ django ]; - # tests appear to be broken on 0.6.1 at least - doCheck = ( version != "0.6.1" ); + # pypi version doesn't include runtest.py, needed to run tests + doCheck = false; meta = with stdenv.lib; { description = "Class based template tags for Django"; diff --git a/pkgs/development/python-modules/dlib/default.nix b/pkgs/development/python-modules/dlib/default.nix new file mode 100644 index 000000000000..90e2c526789f --- /dev/null +++ b/pkgs/development/python-modules/dlib/default.nix @@ -0,0 +1,13 @@ +{ buildPythonPackage, dlib, python, pytest }: + +buildPythonPackage { + inherit (dlib) name src nativeBuildInputs buildInputs meta; + + checkPhase = '' + ${python.interpreter} nix_run_setup test --no USE_AVX_INSTRUCTIONS + ''; + + patches = [ ./build-cores.patch ]; + + checkInputs = [ pytest ]; +} diff --git a/pkgs/development/python-modules/fastpbkdf2/default.nix b/pkgs/development/python-modules/fastpbkdf2/default.nix new file mode 100644 index 000000000000..63a7565cf55a --- /dev/null +++ b/pkgs/development/python-modules/fastpbkdf2/default.nix @@ -0,0 +1,26 @@ +{ stdenv, fetchFromGitHub, buildPythonPackage +, openssl, pytest, cffi, six }: + +buildPythonPackage rec { + pname = "fastpbkdf2"; + version = "0.2"; + + # Fetching from GitHub as tests are missing in PyPI + src = fetchFromGitHub { + owner = "Ayrx"; + repo = "python-fastpbkdf2"; + rev = "v${version}"; + sha256 = "1hvvlk3j28i6nswb6gy3mq7278nq0mgfnpxh1rv6jvi7xhd7qmlc"; + }; + + buildInputs = [ openssl ]; + checkInputs = [ pytest ]; + propagatedBuildInputs = [ cffi six ]; + + meta = with stdenv.lib; { + homepage = https://github.com/Ayrx/python-fastpbkdf2; + description = "Python bindings for fastpbkdf2"; + license = licenses.bsd3; + maintainers = with maintainers; [ jqueiroz ]; + }; +} diff --git a/pkgs/development/python-modules/flask-migrate/default.nix b/pkgs/development/python-modules/flask-migrate/default.nix index 89cbdf0fbf82..1f9177832c35 100644 --- a/pkgs/development/python-modules/flask-migrate/default.nix +++ b/pkgs/development/python-modules/flask-migrate/default.nix @@ -4,11 +4,11 @@ with stdenv.lib; buildPythonPackage rec { pname = "Flask-Migrate"; - version = "2.2.1"; + version = "2.3.0"; src = fetchPypi { inherit pname version; - sha256 = "cd1b4e6cb829eeb41c02ad9202d83bef5f4b7a036dd9fad72ce96ad1e22efb07"; + sha256 = "19rxhva9i5n643vm3d11f8p98jwai2pavysa217p5w5h5cnksnx2"; }; checkInputs = optional isPy3k glibcLocales; diff --git a/pkgs/development/python-modules/foolscap/default.nix b/pkgs/development/python-modules/foolscap/default.nix index 94b90a25d137..8680ff2d2aad 100644 --- a/pkgs/development/python-modules/foolscap/default.nix +++ b/pkgs/development/python-modules/foolscap/default.nix @@ -9,11 +9,11 @@ buildPythonPackage rec { pname = "foolscap"; - version = "0.12.6"; + version = "0.13.1"; src = fetchPypi { inherit pname version; - sha256 = "1bpmqq6485mmr5jza9q2c55l9m1bfsvsbd9drsip7p5qcsi22jrz"; + sha256 = "0sqxp4fshnpcv69c2j04v8c22pjak28iwscxv998h2s3054knxz2"; }; propagatedBuildInputs = [ mock twisted pyopenssl service-identity ]; diff --git a/pkgs/development/python-modules/gevent-websocket/default.nix b/pkgs/development/python-modules/gevent-websocket/default.nix index 28dab3a257f0..78986ec7d306 100644 --- a/pkgs/development/python-modules/gevent-websocket/default.nix +++ b/pkgs/development/python-modules/gevent-websocket/default.nix @@ -7,13 +7,13 @@ buildPythonPackage rec { pname = "gevent-websocket"; - version = "0.9.3"; + version = "0.10.1"; # SyntaxError in tests. disabled = isPy3k; src = fetchPypi { inherit pname version; - sha256 = "07rqwfpbv13mk6gg8mf0bmvcf6siyffjpgai1xd8ky7r801j4xb4"; + sha256 = "1c2zv2rahp1gil3cj66hfsqgy0n35hz9fny3ywhr2319d0lz7bky"; }; propagatedBuildInputs = [ gevent ]; diff --git a/pkgs/development/python-modules/gipc/default.nix b/pkgs/development/python-modules/gipc/default.nix index 9780b46fa5a0..4b174468a7ab 100644 --- a/pkgs/development/python-modules/gipc/default.nix +++ b/pkgs/development/python-modules/gipc/default.nix @@ -7,13 +7,13 @@ buildPythonPackage rec { pname = "gipc"; - version = "0.5.0"; + version = "0.6.0"; disabled = isPy3k; src = fetchPypi { inherit pname version; extension = "zip"; - sha256 = "08c35xzv7nr12d9xwlywlbyzzz2igy0yy6y52q2nrkmh5d4slbpc"; + sha256 = "0pd9by719qh882hqs6xpby61sn1x5h98hms5p2p8yqnycrf1s0h2"; }; propagatedBuildInputs = [ gevent ]; diff --git a/pkgs/development/python-modules/gplaycli/default.nix b/pkgs/development/python-modules/gplaycli/default.nix index 0a8826934089..0c7fa8db01c5 100644 --- a/pkgs/development/python-modules/gplaycli/default.nix +++ b/pkgs/development/python-modules/gplaycli/default.nix @@ -4,18 +4,18 @@ buildPythonPackage rec { pname = "gplaycli"; - version = "3.21"; + version = "3.25"; src = fetchFromGitHub { owner = "matlink"; repo = "gplaycli"; rev = version; - sha256 = "1r5nzi9yzswam0866gypjcvv3f1rw13jwx9s49chp8byxy1dyrs2"; + sha256 = "1rygx5cg4b1vwpkiaq6jcpbc1ly7cspslv3sy7x8n8ba61ryq6h4"; }; - disabled = !isPy3k; + disabled = !isPy3k; - propagatedBuildInputs = [ libffi pyasn1 clint ndg-httpsclient protobuf requests args gpapi pyaxmlparser ]; + propagatedBuildInputs = [ libffi pyasn1 clint ndg-httpsclient protobuf requests args gpapi pyaxmlparser ]; meta = with stdenv.lib; { homepage = https://github.com/matlink/gplaycli; diff --git a/pkgs/development/python-modules/httmock/default.nix b/pkgs/development/python-modules/httmock/default.nix new file mode 100644 index 000000000000..b50753c55864 --- /dev/null +++ b/pkgs/development/python-modules/httmock/default.nix @@ -0,0 +1,22 @@ +{ stdenv, buildPythonPackage, fetchFromGitHub, requests }: + +buildPythonPackage rec { + pname = "httmock"; + version = "1.2.6"; + + src = fetchFromGitHub { + owner = "patrys"; + repo = "httmock"; + rev = version; + sha256 = "0iya8qsb2jm03s9p6sf1yzgm1irxl3dcq0k0a9ygl0skzjz5pvab"; + }; + + checkInputs = [ requests ]; + + meta = with stdenv.lib; { + description = "A mocking library for requests"; + homepage = https://github.com/patrys/httmock; + license = licenses.asl20; + maintainers = with maintainers; [ nyanloutre ]; + }; +} diff --git a/pkgs/development/python-modules/icalendar/default.nix b/pkgs/development/python-modules/icalendar/default.nix index b83785211f88..e2e833f7c476 100644 --- a/pkgs/development/python-modules/icalendar/default.nix +++ b/pkgs/development/python-modules/icalendar/default.nix @@ -7,12 +7,12 @@ }: buildPythonPackage rec { - version = "3.9.0"; + version = "4.0.3"; pname = "icalendar"; src = fetchPypi { inherit pname version; - sha256 = "93d0b94eab23d08f62962542309916a9681f16de3d5eca1c75497f30f1b07792"; + sha256 = "0mk3dk1dxkcm46jy48v27j2w2349iv4sbimqj1yb5js43mx49hh7"; }; buildInputs = [ setuptools ]; diff --git a/pkgs/development/python-modules/imageio/default.nix b/pkgs/development/python-modules/imageio/default.nix index cdbcfee7180f..de8380280670 100644 --- a/pkgs/development/python-modules/imageio/default.nix +++ b/pkgs/development/python-modules/imageio/default.nix @@ -1,28 +1,42 @@ { stdenv , buildPythonPackage -, fetchurl +, fetchPypi +, pillow +, psutil , pytest , numpy +, isPy3k +, futures +, enum34 }: buildPythonPackage rec { pname = "imageio"; - version = "1.6"; + version = "2.4.1"; - src = fetchurl { - url = "https://github.com/imageio/imageio/archive/v${version}.tar.gz"; - sha256 = "195snkk3fsbjqd5g1cfsd9alzs5q45gdbi2ka9ph4yxqb31ijrbv"; + src = fetchPypi { + sha256 = "0jjiwf6wjipmykh33prjh448qv8mpgngfi77ndc7mym5r1xhgf0n"; + inherit pname version; }; - buildInputs = [ pytest ]; - propagatedBuildInputs = [ numpy ]; + checkInputs = [ pytest psutil ]; + propagatedBuildInputs = [ numpy pillow ] ++ stdenv.lib.optionals (!isPy3k) [ + futures + enum34 + ]; checkPhase = '' + export IMAGEIO_USERDIR="$TMP" + export IMAGEIO_NO_INTERNET="true" + export HOME="$(mktemp -d)" py.test ''; - # Tries to write in /var/tmp/.imageio - doCheck = false; + # For some reason, importing imageio also imports xml on Nix, see + # https://github.com/imageio/imageio/issues/395 + postPatch = '' + substituteInPlace tests/test_meta.py --replace '"urllib",' "\"urllib\",\"xml\"" + ''; meta = with stdenv.lib; { description = "Library for reading and writing a wide range of image, video, scientific, and volumetric data formats"; diff --git a/pkgs/development/python-modules/libagent/default.nix b/pkgs/development/python-modules/libagent/default.nix index f70d538bb8d0..f93958860409 100644 --- a/pkgs/development/python-modules/libagent/default.nix +++ b/pkgs/development/python-modules/libagent/default.nix @@ -1,6 +1,6 @@ { stdenv, fetchPypi, buildPythonPackage, ed25519, ecdsa , semver, mnemonic, unidecode, mock, pytest , backports-shutil-which, ConfigArgParse, - pythondaemon, pymsgbox }: + python-daemon, pymsgbox }: buildPythonPackage rec { pname = "libagent"; @@ -12,7 +12,7 @@ buildPythonPackage rec { }; propagatedBuildInputs = [ unidecode backports-shutil-which ConfigArgParse - pythondaemon pymsgbox ecdsa ed25519 mnemonic semver ]; + python-daemon pymsgbox ecdsa ed25519 mnemonic semver ]; checkInputs = [ mock pytest ]; diff --git a/pkgs/development/python-modules/mail-parser/default.nix b/pkgs/development/python-modules/mail-parser/default.nix index e05dc3f2861f..da74830f8798 100644 --- a/pkgs/development/python-modules/mail-parser/default.nix +++ b/pkgs/development/python-modules/mail-parser/default.nix @@ -2,14 +2,14 @@ buildPythonPackage rec { pname = "mail-parser"; - version = "3.3.1"; + version = "3.4.1"; # no tests in PyPI tarball src = fetchFromGitHub { owner = "SpamScope"; repo = pname; rev = "v${version}"; - sha256 = "1b1v61zwgdx2xjzds3hp6bv53yq424hhlrhf445n4faj1l0c4lkg"; + sha256 = "0nxilshq4gwpicdklja9p275yf8l5kr1lk620c3cx9w4qai4cmbv"; }; LC_ALL = "en_US.utf-8"; diff --git a/pkgs/development/python-modules/memory_profiler/default.nix b/pkgs/development/python-modules/memory_profiler/default.nix index 7587e5f33c95..cf976f06ff08 100644 --- a/pkgs/development/python-modules/memory_profiler/default.nix +++ b/pkgs/development/python-modules/memory_profiler/default.nix @@ -1,32 +1,28 @@ { stdenv -, buildPythonPackage -, fetchPypi -, psutil , python }: -buildPythonPackage rec { +python.pkgs.buildPythonPackage rec { pname = "memory_profiler"; version = "0.54.0"; - src = fetchPypi { + src = python.pkgs.fetchPypi { inherit pname version; - sha256 = "d64342a23f32e105f4929b408a8b89d9222c3ce8afbbb3359817555811448d1a"; + sha256 = "06ld8h8mhm8pk0sv7fxgx0y2q8nri65qlh4vjbs0bq9j7yi44hyn"; }; - propagatedBuildInputs = [ psutil ]; - - checkPhase = '' - make test PYTHON=${python.interpreter} - ''; - - # Tests don't import profile - # doCheck = false; + propagatedBuildInputs = with python.pkgs; [ + psutil # needed to profile child processes + matplotlib # needed for plotting memory usage + ]; meta = with stdenv.lib; { - description = "A module for monitoring memory usage of a python program"; + description = "A module for monitoring memory usage of a process"; + longDescription = '' + This is a python module for monitoring memory consumption of a process as + well as line-by-line analysis of memory consumption for python programs. + ''; homepage = https://pypi.python.org/pypi/memory_profiler; license = licenses.bsd3; }; - } diff --git a/pkgs/development/python-modules/moviepy/default.nix b/pkgs/development/python-modules/moviepy/default.nix index 63613b516868..637c014cb1ab 100644 --- a/pkgs/development/python-modules/moviepy/default.nix +++ b/pkgs/development/python-modules/moviepy/default.nix @@ -4,6 +4,7 @@ , numpy , decorator , imageio +, isPy3k , tqdm }: diff --git a/pkgs/development/python-modules/mysql-connector/default.nix b/pkgs/development/python-modules/mysql-connector/default.nix index 4af0c6487b3f..579fc4631f66 100644 --- a/pkgs/development/python-modules/mysql-connector/default.nix +++ b/pkgs/development/python-modules/mysql-connector/default.nix @@ -4,13 +4,13 @@ buildPythonPackage rec { pname = "mysql-connector"; - version = "8.0.12"; + version = "8.0.13"; src = fetchFromGitHub { owner = "mysql"; repo = "mysql-connector-python"; rev = version; - sha256 = "1i3148dka4zfqzz4n4n5k0qaqbc585bdpmjwgx5vp6iiv7pgvrxp"; + sha256 = "1qb6m3cp6zxmr49bp6g5g5b75yszgac1h26i2hza61mrvd235688"; }; propagatedBuildInputs = [ protobuf ]; diff --git a/pkgs/development/python-modules/nbxmpp/default.nix b/pkgs/development/python-modules/nbxmpp/default.nix index 696796740f8b..888e1de6aa57 100644 --- a/pkgs/development/python-modules/nbxmpp/default.nix +++ b/pkgs/development/python-modules/nbxmpp/default.nix @@ -2,7 +2,7 @@ let pname = "nbxmpp"; - version = "0.6.6"; + version = "0.6.8"; name = "${pname}-${version}"; in buildPythonPackage rec { inherit pname version; @@ -11,7 +11,7 @@ in buildPythonPackage rec { name = "${name}.tar.bz2"; url = "https://dev.gajim.org/gajim/python-nbxmpp/repository/archive.tar.bz2?" + "ref=${name}"; - sha256 = "10n7z613p00q15dplsvdrz11s9yq26jy2qack6nd8k7fivfhlcmz"; + sha256 = "09zrqz01j45kvayfscd66avkrnn237lbjg9li5hjhyw92h6hkkc4"; }; propagatedBuildInputs = [ pyopenssl ]; diff --git a/pkgs/development/python-modules/netdisco/default.nix b/pkgs/development/python-modules/netdisco/default.nix index 1e404370284c..036d6f9dea7c 100644 --- a/pkgs/development/python-modules/netdisco/default.nix +++ b/pkgs/development/python-modules/netdisco/default.nix @@ -1,17 +1,14 @@ -{ stdenv, buildPythonPackage, isPy3k, fetchFromGitHub, requests, zeroconf, netifaces, pytest }: +{ stdenv, buildPythonPackage, isPy3k, fetchPypi, requests, zeroconf, netifaces, pytest }: buildPythonPackage rec { pname = "netdisco"; - version = "2.0.0"; + version = "2.2.0"; disabled = !isPy3k; - # PyPI is missing tests/ directory - src = fetchFromGitHub { - owner = "home-assistant"; - repo = pname; - rev = version; - sha256 = "08x5ab7v6a20753y9br7pvfm6a054ywn7y7gh6fydqski0gad6l7"; + src = fetchPypi { + inherit pname version; + sha256 = "b5e810721a266660f7f90fc43f12c4635ec95c3db87d9e30ca408bb922cb1007"; }; propagatedBuildInputs = [ requests zeroconf netifaces ]; @@ -26,7 +23,6 @@ buildPythonPackage rec { description = "Python library to scan local network for services and devices"; homepage = https://github.com/home-assistant/netdisco; license = licenses.asl20; - platforms = platforms.unix; maintainers = with maintainers; [ dotlambda ]; }; } diff --git a/pkgs/development/python-modules/numericalunits/default.nix b/pkgs/development/python-modules/numericalunits/default.nix new file mode 100644 index 000000000000..1212bf0039c9 --- /dev/null +++ b/pkgs/development/python-modules/numericalunits/default.nix @@ -0,0 +1,24 @@ +{ stdenv +, buildPythonPackage +, fetchPypi +}: + +buildPythonPackage rec { + version = "1.16"; + pname = "numericalunits"; + + src = fetchPypi { + inherit pname version; + sha256 = "71ae8e236c7a223bccefffb670dca68be476dd63b7b9009641fc64099455da25"; + }; + + # no tests + doCheck = false; + + meta = with stdenv.lib; { + homepage = http://pypi.python.org/pypi/numericalunits; + description = "A package that lets you define quantities with unit"; + license = licenses.mit; + maintainers = [ maintainers.costrouc ]; + }; +} diff --git a/pkgs/development/python-modules/owslib/default.nix b/pkgs/development/python-modules/owslib/default.nix new file mode 100644 index 000000000000..7331511568fa --- /dev/null +++ b/pkgs/development/python-modules/owslib/default.nix @@ -0,0 +1,22 @@ +{ lib, buildPythonPackage, fetchPypi, dateutil, requests, pytz, pyproj , pytest } : +buildPythonPackage rec { + pname = "OWSLib"; + version = "0.17.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "1px2nmbpbpp556kjq0ym0a7j24nbvs4w829727b2gr4a4ff86hxc"; + }; + + buildInputs = [ pytest ]; + propagatedBuildInputs = [ dateutil pyproj pytz requests ]; + + # 'tests' dir not included in pypy distribution archive. + doCheck = false; + + meta = with lib; { + description = "client for Open Geospatial Consortium web service interface standards"; + license = licenses.bsd3; + homepage = https://www.osgeo.org/projects/owslib/; + }; +} diff --git a/pkgs/development/python-modules/pip-tools/default.nix b/pkgs/development/python-modules/pip-tools/default.nix index 89b0d56a4016..de35a06d6d47 100644 --- a/pkgs/development/python-modules/pip-tools/default.nix +++ b/pkgs/development/python-modules/pip-tools/default.nix @@ -3,12 +3,12 @@ buildPythonPackage rec { pname = "pip-tools"; - version = "2.0.2"; + version = "3.1.0"; name = pname + "-" + version; src = fetchurl { url = "mirror://pypi/p/pip-tools/${name}.tar.gz"; - sha256 = "f11fc3bf1d87a0b4a68d4d595f619814e2396e92d75d7bdd2500edbf002ea6de"; + sha256 = "0w1qdkr5n612nb3b890mbdyjb3cxn2mna1c7ysr4d0x4nh1wmkmi"; }; LC_ALL = "en_US.UTF-8"; diff --git a/pkgs/development/python-modules/priority/default.nix b/pkgs/development/python-modules/priority/default.nix new file mode 100644 index 000000000000..90b58b665de8 --- /dev/null +++ b/pkgs/development/python-modules/priority/default.nix @@ -0,0 +1,23 @@ +{ lib, buildPythonPackage, fetchPypi, pytest, hypothesis }: + +buildPythonPackage rec { + pname = "priority"; + version = "1.3.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "1gpzn9k9zgks0iw5wdmad9b4dry8haiz2sbp6gycpjkzdld9dhbb"; + }; + + checkInputs = [ pytest hypothesis ]; + checkPhase = '' + PYTHONPATH="src:$PYTHONPATH" pytest + ''; + + meta = with lib; { + homepage = https://python-hyper.org/priority/; + description = "A pure-Python implementation of the HTTP/2 priority tree"; + license = licenses.mit; + maintainers = [ maintainers.qyliss ]; + }; +} diff --git a/pkgs/development/python-modules/pycares/default.nix b/pkgs/development/python-modules/pycares/default.nix index bf863fae57b9..4755bf908fda 100644 --- a/pkgs/development/python-modules/pycares/default.nix +++ b/pkgs/development/python-modules/pycares/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "pycares"; - version = "1.0.0"; + version = "2.3.0"; src = fetchPypi { inherit pname version; - sha256 = "a18341ea030e2cc0743acdf4aa72302bdf6b820938b36ce4bd76e43faa2276a3"; + sha256 = "0h4fxw5drrhfyslzmfpljk0qnnpbhhb20hnnndzahhbwylyw1x1n"; }; propagatedBuildInputs = [ pkgs.c-ares ]; diff --git a/pkgs/development/python-modules/pyramid_multiauth/default.nix b/pkgs/development/python-modules/pyramid_multiauth/default.nix index 7130e8b499f3..7c01e3e093bd 100644 --- a/pkgs/development/python-modules/pyramid_multiauth/default.nix +++ b/pkgs/development/python-modules/pyramid_multiauth/default.nix @@ -6,11 +6,11 @@ buildPythonPackage rec { pname = "pyramid_multiauth"; - version = "0.8.0"; + version = "0.9.0"; src = fetchPypi { inherit pname version; - sha256 = "1lq292qakrm4ixi4vaif8dqywzj08pn6qy0wi4gw28blh39p0msk"; + sha256 = "0lprqjyg3zcji6033p1l3s4nigjigc5423wgivkfhz46vq0jmniy"; }; propagatedBuildInputs = [ pyramid ]; diff --git a/pkgs/development/python-modules/pyro/default.nix b/pkgs/development/python-modules/pyro/default.nix deleted file mode 100644 index 3a74a1fe6fa7..000000000000 --- a/pkgs/development/python-modules/pyro/default.nix +++ /dev/null @@ -1,22 +0,0 @@ -{ stdenv, fetchurl, buildPythonPackage, isPy3k }: - -buildPythonPackage rec { - pname = "Pyro"; - version = "3.16"; - name = pname + "-" + version; - - disabled = isPy3k; - - src = fetchurl { - url = "mirror://pypi/P/Pyro/${name}.tar.gz"; - sha256 = "1bed508453ef7a7556b51424a58101af2349b662baab7e7331c5cb85dbe7e578"; - }; - - meta = with stdenv.lib; { - description = "Distributed object middleware for Python (IPC/RPC)"; - homepage = https://pythonhosted.org/Pyro/; - license = licenses.mit; - platforms = platforms.unix; - maintainers = with maintainers; [ bjornfor ]; - }; -} diff --git a/pkgs/development/python-modules/pyro4/default.nix b/pkgs/development/python-modules/pyro4/default.nix new file mode 100644 index 000000000000..df8df2cb93ca --- /dev/null +++ b/pkgs/development/python-modules/pyro4/default.nix @@ -0,0 +1,46 @@ +{ stdenv +, buildPythonPackage +, fetchPypi +, lib +, python +, serpent +, dill +, cloudpickle +, msgpack +, isPy27 +, isPy33 +, selectors34 +}: + +buildPythonPackage rec { + + name = "${pname}-${version}"; + pname = "Pyro4"; + version = "4.74"; + + src = fetchPypi { + inherit pname version; + sha256 = "89ed7b12c162e5124f322f992f9506c44f5e1a379926cf01ee73ef810d3bf75f"; + }; + + propagatedBuildInputs = [ + serpent + ] ++ lib.optionals (isPy27 || isPy33) [ selectors34 ]; + + buildInputs = [ + dill + cloudpickle + msgpack + ]; + + checkPhase = '' + ${python.interpreter} setup.py test + ''; + + meta = with stdenv.lib; { + description = "Distributed object middleware for Python (RPC)"; + homepage = https://github.com/irmen/Pyro4; + license = licenses.mit; + maintainers = with maintainers; [ prusnak ]; + }; +} diff --git a/pkgs/development/python-modules/python-gitlab/default.nix b/pkgs/development/python-modules/python-gitlab/default.nix new file mode 100644 index 000000000000..24ab69f1a0bc --- /dev/null +++ b/pkgs/development/python-modules/python-gitlab/default.nix @@ -0,0 +1,22 @@ +{ stdenv, buildPythonPackage, fetchPypi, requests, six, mock, httmock }: + +buildPythonPackage rec { + pname = "python-gitlab"; + version = "1.6.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "20ceb9232f9a412ce6554056a6b5039013d0755261d57b5c8ada7035773de795"; + }; + + propagatedBuildInputs = [ requests six ]; + + checkInputs = [ mock httmock ]; + + meta = with stdenv.lib; { + description = "Interact with GitLab API"; + homepage = https://github.com/python-gitlab/python-gitlab; + license = licenses.lgpl3; + maintainers = with maintainers; [ nyanloutre ]; + }; +} diff --git a/pkgs/development/python-modules/python-packer/default.nix b/pkgs/development/python-modules/python-packer/default.nix index 3f0c1f8138f9..ff3d28b47466 100644 --- a/pkgs/development/python-modules/python-packer/default.nix +++ b/pkgs/development/python-modules/python-packer/default.nix @@ -1,4 +1,4 @@ -{ stdenv, buildPythonPackage, fetchPypi, sh }: +{ stdenv, buildPythonPackage, fetchPypi, fetchpatch, sh }: buildPythonPackage rec { pname = "python-packer"; @@ -9,6 +9,12 @@ buildPythonPackage rec { sha256 = "fd363dae9bd2efd447739bbf7a4f29c1e4741596ae7b02d252fe525b2b4176e7"; }; + patches = fetchpatch { + url = "${meta.homepage}/commit/de3421bf13bf7c3ec11fe0a381f0944e102b1d97.patch"; + excludes = [ "dev-requirements.txt" ]; + sha256 = "0rgmkyn7i6y1xs8m75dpl8hq7j2ns2s3dvp7kv9j4zwic93rrlsc"; + }; + propagatedBuildInputs = [ sh ]; # Tests requires network connections diff --git a/pkgs/development/python-modules/pyzmq/default.nix b/pkgs/development/python-modules/pyzmq/default.nix index 31b08d0a9e0b..71243ef6f76e 100644 --- a/pkgs/development/python-modules/pyzmq/default.nix +++ b/pkgs/development/python-modules/pyzmq/default.nix @@ -2,7 +2,7 @@ , fetchPypi , pytest , tornado -, zeromq3 +, zeromq , py , python }: @@ -17,7 +17,7 @@ buildPythonPackage rec { }; checkInputs = [ pytest tornado ]; - buildInputs = [ zeromq3]; + buildInputs = [ zeromq ]; propagatedBuildInputs = [ py ]; # test_socket.py seems to be hanging diff --git a/pkgs/development/python-modules/requests_download/default.nix b/pkgs/development/python-modules/requests_download/default.nix index 6d1264dee67e..8062834e1803 100644 --- a/pkgs/development/python-modules/requests_download/default.nix +++ b/pkgs/development/python-modules/requests_download/default.nix @@ -6,18 +6,18 @@ buildPythonPackage rec { pname = "requests_download"; - version = "0.1.1"; + version = "0.1.2"; format = "wheel"; #src = pkgs.fetchurl { - # url = https://files.pythonhosted.org/packages/60/af/10f899f0574a81cbc511124c08d7c7dc46c20d4f956a6a3c793ad4330bb4/requests_download-0.1.1-py2.py3-none-any.whl; - # sha256 = "07832a93314bcd619aaeb08611ae245728e66672efb930bc2a300a115a47dab7"; + # url = https://files.pythonhosted.org/packages/60/af/10f899f0574a81cbc511124c08d7c7dc46c20d4f956a6a3c793ad4330bb4/requests_download-0.1.2-py2.py3-none-any.whl; + # sha256 = "1ballx1hljpdpyvqzqn79m0dc21z2smrnxk2ylb6dbpg5crrskcr"; #}; src = fetchPypi { inherit pname version format; - sha256 = "07832a93314bcd619aaeb08611ae245728e66672efb930bc2a300a115a47dab7"; + sha256 = "1ballx1hljpdpyvqzqn79m0dc21z2smrnxk2ylb6dbpg5crrskcr"; }; propagatedBuildInputs = [ requests ]; diff --git a/pkgs/development/python-modules/salmon-mail/default.nix b/pkgs/development/python-modules/salmon-mail/default.nix index b278d26b5dda..9486899c6061 100644 --- a/pkgs/development/python-modules/salmon-mail/default.nix +++ b/pkgs/development/python-modules/salmon-mail/default.nix @@ -1,5 +1,5 @@ { stdenv, buildPythonPackage, fetchPypi, nose, dnspython -, chardet, lmtpd, pythondaemon, six, jinja2, mock }: +, chardet, lmtpd, python-daemon, six, jinja2, mock }: buildPythonPackage rec { pname = "salmon-mail"; @@ -11,7 +11,7 @@ buildPythonPackage rec { }; checkInputs = [ nose jinja2 mock ]; - propagatedBuildInputs = [ chardet dnspython lmtpd pythondaemon six ]; + propagatedBuildInputs = [ chardet dnspython lmtpd python-daemon six ]; # The tests use salmon executable installed by salmon itself so we need to add # that to PATH diff --git a/pkgs/development/python-modules/selectors34/default.nix b/pkgs/development/python-modules/selectors34/default.nix new file mode 100644 index 000000000000..76f6232bafa7 --- /dev/null +++ b/pkgs/development/python-modules/selectors34/default.nix @@ -0,0 +1,32 @@ +{ stdenv +, buildPythonPackage +, fetchPypi +, lib +, python +, six +}: + +buildPythonPackage rec { + + name = "${pname}-${version}"; + pname = "selectors34"; + version = "1.2"; + + src = fetchPypi { + inherit pname version; + sha256 = "09f5066337f8a76fb5233f267873f89a27a17c10bf79575954894bb71686451c"; + }; + + propagatedBuildInputs = [ six ]; + + checkPhase = '' + ${python.interpreter} setup.py test + ''; + + meta = with stdenv.lib; { + description = "A backport of the selectors module from Python 3.4"; + homepage = https://github.com/berkerpeksag/selectors34; + license = licenses.psfl; + maintainers = with maintainers; [ prusnak ]; + }; +} diff --git a/pkgs/development/python-modules/serpent/default.nix b/pkgs/development/python-modules/serpent/default.nix new file mode 100644 index 000000000000..5ea59eb6a2a3 --- /dev/null +++ b/pkgs/development/python-modules/serpent/default.nix @@ -0,0 +1,34 @@ +{ stdenv +, buildPythonPackage +, fetchPypi +, lib +, python +, isPy27 +, isPy33 +, enum34 +}: + +buildPythonPackage rec { + + name = "${pname}-${version}"; + pname = "serpent"; + version = "1.27"; + + src = fetchPypi { + inherit pname version; + sha256 = "6f8dc4317fb5b5a9629b5e518846bc9fee374b8171533726dc68df52b36ee912"; + }; + + propagatedBuildInputs = lib.optionals (isPy27 || isPy33) [ enum34 ]; + + checkPhase = '' + ${python.interpreter} setup.py test + ''; + + meta = with stdenv.lib; { + description = "A simple serialization library based on ast.literal_eval"; + homepage = https://github.com/irmen/Serpent; + license = licenses.mit; + maintainers = with maintainers; [ prusnak ]; + }; +} diff --git a/pkgs/development/python-modules/sh/default.nix b/pkgs/development/python-modules/sh/default.nix new file mode 100644 index 000000000000..37388bf46900 --- /dev/null +++ b/pkgs/development/python-modules/sh/default.nix @@ -0,0 +1,24 @@ +{ stdenv, buildPythonPackage, fetchPypi, coverage }: + +buildPythonPackage rec { + pname = "sh"; + version = "1.12.14"; + + src = fetchPypi { + inherit pname version; + sha256 = "1z2hx357xp3v4cv44xmqp7lli3frndqpyfmpbxf7n76h7s1zaaxm"; + }; + + checkInputs = [ coverage ]; + + # A test needs the HOME directory to be different from $TMPDIR. + preCheck = '' + HOME=$(mktemp -d) + ''; + + meta = { + description = "Python subprocess interface"; + homepage = https://pypi.python.org/pypi/sh/; + license = stdenv.lib.licenses.mit; + }; +} diff --git a/pkgs/development/python-modules/sslib/default.nix b/pkgs/development/python-modules/sslib/default.nix new file mode 100644 index 000000000000..3e5be211d42b --- /dev/null +++ b/pkgs/development/python-modules/sslib/default.nix @@ -0,0 +1,22 @@ +{ stdenv, fetchPypi, buildPythonPackage, isPy3k }: + +buildPythonPackage rec { + pname = "sslib"; + version = "0.2.0"; + disabled = !isPy3k; + + src = fetchPypi { + inherit pname version; + sha256 = "0b5zrjkvx4klmv57pzhcmvbkdlyn745mn02k7hp811hvjrhbz417"; + }; + + # No tests available + doCheck = false; + + meta = with stdenv.lib; { + homepage = https://github.com/jqueiroz/python-sslib; + description = "A Python3 library for sharing secrets"; + license = licenses.mit; + maintainers = with maintainers; [ jqueiroz ]; + }; +} diff --git a/pkgs/development/python-modules/sympy/default.nix b/pkgs/development/python-modules/sympy/default.nix index fb702e046a48..1bf7511d2bb9 100644 --- a/pkgs/development/python-modules/sympy/default.nix +++ b/pkgs/development/python-modules/sympy/default.nix @@ -8,11 +8,11 @@ buildPythonPackage rec { pname = "sympy"; - version = "1.2"; # Upgrades may break sage. Please test. + version = "1.3"; # Upgrades may break sage. Please test or ping @timokau. src = fetchPypi { inherit pname version; - sha256 = "0pr2v7dl51ngch1cfs423qsb472l9ys1m8m7vrhhh99fsxqa0v18"; + sha256 = "0m0vhyv15zszn19mk5xq3py4iijjbr7f3fpy1s57b8q7c9arncg1"; }; checkInputs = [ glibcLocales ]; diff --git a/pkgs/development/python-modules/trueskill/default.nix b/pkgs/development/python-modules/trueskill/default.nix new file mode 100644 index 000000000000..2106e4d2e76c --- /dev/null +++ b/pkgs/development/python-modules/trueskill/default.nix @@ -0,0 +1,28 @@ +{ stdenv, buildPythonPackage, fetchPypi +, six }: + +buildPythonPackage rec { + pname = "trueskill"; + version = "0.4.5"; + + src = fetchPypi { + inherit pname version; + sha256 = "1fv7g1szyjykja9mzax2w4js7jm2z7wwzgnr5dqrsdi84j6v8qlx"; + }; + + propagatedBuildInputs = [ + six + ]; + + # Can't build distribute, see https://github.com/NixOS/nixpkgs/pull/49340 + doCheck = false; + + meta = with stdenv.lib; { + description = "The video game rating system"; + homepage = https://trueskill.org; + license = licenses.bsd3; + maintainers = with maintainers; [ + eadwu + ]; + }; +} diff --git a/pkgs/development/python-modules/txaio/default.nix b/pkgs/development/python-modules/txaio/default.nix index 01d7b04b3dd6..2bfdbae918a1 100644 --- a/pkgs/development/python-modules/txaio/default.nix +++ b/pkgs/development/python-modules/txaio/default.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "txaio"; - version = "18.8.1"; + version = "18.7.1"; src = fetchPypi { inherit pname version; - sha256 = "1zmpdph6zddgrnkkcykh6qk5s46l7s5mzfqrh82m4b5iffn61qv7"; + sha256 = "701de939e90bb80f7e085357081552437526752199def5541dddfc34c0b0593f"; }; checkInputs = [ pytest mock ]; diff --git a/pkgs/development/python-modules/zstd/default.nix b/pkgs/development/python-modules/zstd/default.nix new file mode 100644 index 000000000000..53c3c8969abf --- /dev/null +++ b/pkgs/development/python-modules/zstd/default.nix @@ -0,0 +1,49 @@ +{ stdenv, pkgconfig, fetchpatch, fetchFromGitHub, buildPythonPackage +, zstd, pytest }: + +buildPythonPackage rec { + pname = "zstd"; + version = "1.3.5.1"; + + # Switch back to fetchPypi when tests/ is included, see https://github.com/NixOS/nixpkgs/pull/49339 + src = fetchFromGitHub { + owner = "sergey-dryabzhinsky"; + repo = "python-zstd"; + rev = "v${version}"; + sha256 = "08n1vz4zavas4cgzpdfcbpy33lnv39xxhq5mgj0zv3xi03ypc1rl"; + }; + + postPatch = '' + substituteInPlace setup.py \ + --replace "/usr/bin/pkg-config" "${pkgconfig}/bin/pkg-config" + ''; + + nativeBuildInputs = [ pkgconfig ]; + buildInputs = [ zstd ]; + + setupPyBuildFlags = [ + "--external" + "--include-dirs=${zstd}/include" + "--libraries=zstd" + "--library-dirs=${zstd}/lib" + ]; + + # Running tests via setup.py triggers an attempt to recompile with the vendored zstd + ZSTD_EXTERNAL = 1; + VERSION = zstd.version; + PKG_VERSION = version; + + checkInputs = [ pytest ]; + checkPhase = '' + pytest + ''; + + meta = with stdenv.lib; { + description = "Simple python bindings to Yann Collet ZSTD compression library"; + homepage = https://github.com/sergey-dryabzhinsky/python-zstd; + license = licenses.bsd2; + maintainers = with maintainers; [ + eadwu + ]; + }; +} diff --git a/pkgs/development/r-modules/bioc-annotation-packages.nix b/pkgs/development/r-modules/bioc-annotation-packages.nix index 54c4968607df..863d7c9fcfe0 100644 --- a/pkgs/development/r-modules/bioc-annotation-packages.nix +++ b/pkgs/development/r-modules/bioc-annotation-packages.nix @@ -7,11 +7,12 @@ let derive2 = derive { biocVersion = "3.8"; }; in with self; { AHCytoBands = derive2 { name="AHCytoBands"; version="0.99.0"; sha256="0g92nz33rx14zl5can7s701bipdgz7rxqygvvc22c4a0qj52ijnq"; depends=[]; }; - AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.6"; sha256="1sdxj2rxhc2cj2rgfif2flnic57zkdrhdvhr3y64amcmrp57xgj4"; depends=[AnnotationHubData ensembldb]; }; + AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.8"; sha256="1v1177l4y0l546mzp8ybhvhnjwrsck5bkic8w6n6n2xq07d6aahz"; depends=[AnnotationHubData ensembldb]; }; BSgenome_Alyrata_JGI_v1 = derive2 { name="BSgenome.Alyrata.JGI.v1"; version="1.0.0"; sha256="06549kkzy36n378zb61lrf9zardncp7i20r73rmmiq1pnfjp3gww"; depends=[BSgenome]; }; BSgenome_Amellifera_BeeBase_assembly4 = derive2 { name="BSgenome.Amellifera.BeeBase.assembly4"; version="1.4.0"; sha256="02zs16q441zcbfp7xvv1gny5nn02ivfr8md1wh5s5rpnj6sdl6kj"; depends=[BSgenome]; }; BSgenome_Amellifera_UCSC_apiMel2 = derive2 { name="BSgenome.Amellifera.UCSC.apiMel2"; version="1.4.0"; sha256="1967w7aly7qydykk7rar712kvgsav3zjr4kirybkj17nwiynd74g"; depends=[BSgenome]; }; BSgenome_Amellifera_UCSC_apiMel2_masked = derive2 { name="BSgenome.Amellifera.UCSC.apiMel2.masked"; version="1.3.99"; sha256="128jmpnpbz1afqvhvdc9vrc8gmlyg26ca7qz362qsx89jrm4khpr"; depends=[BSgenome BSgenome_Amellifera_UCSC_apiMel2]; }; + BSgenome_Aofficinalis_NCBI_V1 = derive2 { name="BSgenome.Aofficinalis.NCBI.V1"; version="1.0.0"; sha256="0n6m5jnpiz6bv46b7s396qkxha2d8271j747j50v2zb6a7wd0rjr"; depends=[BSgenome]; }; BSgenome_Athaliana_TAIR_04232008 = derive2 { name="BSgenome.Athaliana.TAIR.04232008"; version="1.3.1000"; sha256="0dsbjfh2yf0v3zmbypn9p3alvwhfw2qyr5vivyj7x9ablylb6qxc"; depends=[BSgenome]; }; BSgenome_Athaliana_TAIR_TAIR9 = derive2 { name="BSgenome.Athaliana.TAIR.TAIR9"; version="1.3.1000"; sha256="0n45sn80c5nchfj1wzbcaicfyg66id2zhr5xm3w238idkbj05l00"; depends=[BSgenome]; }; BSgenome_Btaurus_UCSC_bosTau3 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau3"; version="1.4.0"; sha256="0vh3664q7pynfw763pwg2h74h0ncmi5nslvj7y5bj1q7pvf03zpc"; depends=[BSgenome]; }; @@ -21,6 +22,7 @@ in with self; { BSgenome_Btaurus_UCSC_bosTau6 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau6"; version="1.4.0"; sha256="0waaf9wfmdl5jbi3la64vsiqb83lyw9fqg3sn90bf1q7k3k617p3"; depends=[BSgenome]; }; BSgenome_Btaurus_UCSC_bosTau6_masked = derive2 { name="BSgenome.Btaurus.UCSC.bosTau6.masked"; version="1.3.99"; sha256="07isv0lcvlsl0aha1p474l0pps0j7bsh455m33vfxwahivqsfy27"; depends=[BSgenome BSgenome_Btaurus_UCSC_bosTau6]; }; BSgenome_Btaurus_UCSC_bosTau8 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau8"; version="1.4.2"; sha256="16wjy1aw9nvx03r7w8yh5w7sw3pn8i9nczd0n0728l6nnyqxlsz6"; depends=[BSgenome]; }; + BSgenome_Carietinum_NCBI_v1 = derive2 { name="BSgenome.Carietinum.NCBI.v1"; version="1.0.0"; sha256="1asyyb1p1bzc7dv9s2igjxrf9f144vvz2xbv9qxg15w9qzzx7r33"; depends=[BSgenome]; }; BSgenome_Celegans_UCSC_ce10 = derive2 { name="BSgenome.Celegans.UCSC.ce10"; version="1.4.0"; sha256="1zaym97jk4npxk14ifvwz2rvhm4zx9xgs33r9vvx9rlynp0gydrk"; depends=[BSgenome]; }; BSgenome_Celegans_UCSC_ce11 = derive2 { name="BSgenome.Celegans.UCSC.ce11"; version="1.4.2"; sha256="0d4bxfglpqiv1f0n6imdgz101g9383hfj3ra91268wryzlm0yk5w"; depends=[BSgenome]; }; BSgenome_Celegans_UCSC_ce2 = derive2 { name="BSgenome.Celegans.UCSC.ce2"; version="1.4.0"; sha256="1x7nvisz7mjrpqlsiw4an04f8hksygzn96p5ld0388hljg78dax8"; depends=[BSgenome]; }; @@ -78,6 +80,7 @@ in with self; { BSgenome_Ptroglodytes_UCSC_panTro3 = derive2 { name="BSgenome.Ptroglodytes.UCSC.panTro3"; version="1.4.0"; sha256="1vbfx0zrj4rcwcsm1q09xdiv0mmrycj8223lnxqb8nr5r017f7gm"; depends=[BSgenome]; }; BSgenome_Ptroglodytes_UCSC_panTro3_masked = derive2 { name="BSgenome.Ptroglodytes.UCSC.panTro3.masked"; version="1.3.99"; sha256="18ga0whdcp5zpigrmh68wjmn99lzvfyvgxjm58y0jx66rmg94mir"; depends=[BSgenome BSgenome_Ptroglodytes_UCSC_panTro3]; }; BSgenome_Ptroglodytes_UCSC_panTro5 = derive2 { name="BSgenome.Ptroglodytes.UCSC.panTro5"; version="1.4.2"; sha256="0wxciajcyf0hr6g6zcji125jm18nnspwvnv5x3jibjvxzx55gcds"; depends=[BSgenome]; }; + BSgenome_Ptroglodytes_UCSC_panTro6 = derive2 { name="BSgenome.Ptroglodytes.UCSC.panTro6"; version="1.4.2"; sha256="1l1fqnw1iqb2a7kvyvb0m1vdvq6cxs6py92yvbaf4zwklmgmdq0b"; depends=[BSgenome]; }; BSgenome_Rnorvegicus_UCSC_rn4 = derive2 { name="BSgenome.Rnorvegicus.UCSC.rn4"; version="1.4.0"; sha256="1aww2bxyqbb81iln3vgrb0659r82v9yv1z41k9r3zws8b7k7df6x"; depends=[BSgenome]; }; BSgenome_Rnorvegicus_UCSC_rn4_masked = derive2 { name="BSgenome.Rnorvegicus.UCSC.rn4.masked"; version="1.3.99"; sha256="0jfv1873ab1nwwdr18vrjqcdl4rhv3xgqbf4jfnjk7sjx154pfi6"; depends=[BSgenome BSgenome_Rnorvegicus_UCSC_rn4]; }; BSgenome_Rnorvegicus_UCSC_rn5 = derive2 { name="BSgenome.Rnorvegicus.UCSC.rn5"; version="1.4.0"; sha256="1s92983m73bi08ihvyd8c17yx29hz5xxrnrs2if8fda4asw1f3f0"; depends=[BSgenome]; }; @@ -105,6 +108,7 @@ in with self; { EnsDb_Mmusculus_v79 = derive2 { name="EnsDb.Mmusculus.v79"; version="2.99.0"; sha256="1zpmq7v55if6q9r0h883q9k8l70ym20b01m9hxf121wb256rl9f7"; depends=[ensembldb]; }; EnsDb_Rnorvegicus_v75 = derive2 { name="EnsDb.Rnorvegicus.v75"; version="2.99.0"; sha256="02sx9l1p67ihkn0dfzbi08cpp8x4k2mjdqn7hvzfiaibsbqp70bb"; depends=[ensembldb]; }; EnsDb_Rnorvegicus_v79 = derive2 { name="EnsDb.Rnorvegicus.v79"; version="2.99.0"; sha256="1ki2hrn0a55f3ipxny0hpgl5ld9pjkhcwmvvqwwd99f3sqbxf3br"; depends=[ensembldb]; }; + EuPathDB = derive2 { name="EuPathDB"; version="1.0.0"; sha256="08yl7zx5j6ywnrdcrrsvfkkxnvhrhrcddxw0g5sv90gy55zgv86n"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDbData GenomicRanges]; }; FDb_FANTOM4_promoters_hg19 = derive2 { name="FDb.FANTOM4.promoters.hg19"; version="1.0.0"; sha256="04sn5x1r5fcbghzw6n1bvy0z8zyhrbk86wsqz1p5gk665vicz8rw"; depends=[AnnotationDbi Biostrings GenomicFeatures]; }; FDb_InfiniumMethylation_hg18 = derive2 { name="FDb.InfiniumMethylation.hg18"; version="2.2.0"; sha256="0vwzqzj49imjdsn8ssiwqi7qic7rqw5pbsiinyxgy7y10fn2i42a"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg18_knownGene]; }; FDb_InfiniumMethylation_hg19 = derive2 { name="FDb.InfiniumMethylation.hg19"; version="2.2.0"; sha256="0gq90fvph6kgrpjb89nvzq6hl1k24swn19rgjh5g98l86mja6nk0"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg19_knownGene]; }; @@ -112,8 +116,8 @@ in with self; { FDb_UCSC_snp137common_hg19 = derive2 { name="FDb.UCSC.snp137common.hg19"; version="1.0.0"; sha256="1q1r7rk29q0zlzxz6fvfy1kjfli6wxzvhvhhfnf3z4ksy5332q63"; depends=[AnnotationDbi GenomicFeatures]; }; FDb_UCSC_tRNAs = derive2 { name="FDb.UCSC.tRNAs"; version="1.0.1"; sha256="1dymdalx9fzrplxyc0fd9faa4r5jimi7zyry9k65lyz1pabpkwqz"; depends=[AnnotationDbi GenomicFeatures]; }; GGHumanMethCancerPanelv1_db = derive2 { name="GGHumanMethCancerPanelv1.db"; version="1.4.1"; sha256="0ag1pkbh4mx4aplfrrz1q4f4cl05mczq9pcsfkd1071qk51dcwvx"; depends=[AnnotationDbi AnnotationForge org_Hs_eg_db]; }; - GO_db = derive2 { name="GO.db"; version="3.6.0"; sha256="0fi2qywr9apg5lwfqfq9qq6bgrnv4rdhxx25656qn4bsy62i838j"; depends=[AnnotationDbi]; }; - GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.1.0"; sha256="0k1hsjx6n2i1sf14hyrgdhxqxm5mxk0bgnivhiax944whcicmzbf"; depends=[]; }; + GO_db = derive2 { name="GO.db"; version="3.7.0"; sha256="0i3wcf5h3n0dawzc1hy0kv74f06j80c47n4p3g3fmrcxlhi3jpa5"; depends=[AnnotationDbi]; }; + GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.2.0"; sha256="0di6nlqpsyqf693k2na65ayqldih563x3zfrczpqc5q2hl5kg35c"; depends=[]; }; Homo_sapiens = derive2 { name="Homo.sapiens"; version="1.3.1"; sha256="151vj7h5p1c8yd5swrchk46z469p135wk50hvkl0nhgndvy0jj01"; depends=[AnnotationDbi GenomicFeatures GO_db org_Hs_eg_db OrganismDbi TxDb_Hsapiens_UCSC_hg19_knownGene]; }; Hs6UG171_db = derive2 { name="Hs6UG171.db"; version="3.2.3"; sha256="034aady3hy8j9bm7pbl8l8h0gcfnzmpyxg9l9s1ky0pj7ryzr93a"; depends=[AnnotationDbi org_Hs_eg_db]; }; HsAgilentDesign026652_db = derive2 { name="HsAgilentDesign026652.db"; version="3.2.3"; sha256="0x6nxvzmc8k4qp382ca32y58awkxpg0b3kc7m1mz9iag6sq7c5vx"; depends=[AnnotationDbi org_Hs_eg_db]; }; @@ -136,6 +140,18 @@ in with self; { JazaeriMetaData_db = derive2 { name="JazaeriMetaData.db"; version="3.2.3"; sha256="04lvcmm4ybxkfwgbiwcnpyj6kpbd0gd7jz6ijlbbvv6zdgdmvykb"; depends=[AnnotationDbi org_Hs_eg_db]; }; KEGG_db = derive2 { name="KEGG.db"; version="3.2.3"; sha256="0qv9in1nmnqcbjxh0y45x33xyw9zdp4jf5hmlvcsh1pclcq4dsh2"; depends=[AnnotationDbi]; }; LAPOINTE_db = derive2 { name="LAPOINTE.db"; version="3.2.3"; sha256="0960gy5p4ybs5zs6251cgc3nk5a9gsh1nh23gkbkr3gc8jddinfm"; depends=[AnnotationDbi org_Hs_eg_db]; }; + LRBase_Ath_eg_db = derive2 { name="LRBase.Ath.eg.db"; version="0.99.1"; sha256="0v7zyp6mngdfrqgx0fb6lj0ara7q4ch2dahnwqjk5y9psmvi8m16"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Bta_eg_db = derive2 { name="LRBase.Bta.eg.db"; version="0.99.1"; sha256="14yl5d4vmm2hjrlxsflwvkw18j0kcz364b3mc3fnxzbk8phisy3l"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Cel_eg_db = derive2 { name="LRBase.Cel.eg.db"; version="0.99.1"; sha256="18w8ay874qjs4qgb3g1j77k2fspvvvbyy3p85wgzy1yl839ngy3b"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Dme_eg_db = derive2 { name="LRBase.Dme.eg.db"; version="0.99.1"; sha256="0qbc5942g57mjdlhqpnapwq58bmi5xbc0mrqbqkfbxpx881ka2v6"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Dre_eg_db = derive2 { name="LRBase.Dre.eg.db"; version="0.99.1"; sha256="0wpx9dg2nhw20f3vvmaqy5yip8xwg1niswspxs4jv9krd0z6h5d8"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Gga_eg_db = derive2 { name="LRBase.Gga.eg.db"; version="0.99.1"; sha256="0nycj3h69ca2gxxmc08zvf0jv5zylfayhd6sgzrmqz0zsr0n5fxk"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Hsa_eg_db = derive2 { name="LRBase.Hsa.eg.db"; version="0.99.1"; sha256="0g690d63sp5pb0i28zvi80y41n6b31mzza46invjvq9c1j2rijzd"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Mmu_eg_db = derive2 { name="LRBase.Mmu.eg.db"; version="0.99.1"; sha256="0kmd69a31hw8i2p8qg64m074ypa102cfa7qpyz2m7nr6gwb3ik3z"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Pab_eg_db = derive2 { name="LRBase.Pab.eg.db"; version="0.99.1"; sha256="0scycwpdmr6yvfyqsani1372pmyqxzvv30wsvy8hx3km7dcd4ypz"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Rno_eg_db = derive2 { name="LRBase.Rno.eg.db"; version="0.99.1"; sha256="1b5rzb9kpnak90fb55y380qmspd8gah3wxvsliv1lddab65m5ch3"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Ssc_eg_db = derive2 { name="LRBase.Ssc.eg.db"; version="0.99.1"; sha256="1p1crrh3wkinvhqmy9b1h4j9yfvwbsykhm6b0xlhn0kzdqxlizjf"; depends=[LRBaseDbi RSQLite]; }; + LRBase_Xtr_eg_db = derive2 { name="LRBase.Xtr.eg.db"; version="0.99.1"; sha256="0aqzcll2ylzbbq42ns0hp7l9p6343l2qlsv5zkglla1bxdxl6m4h"; depends=[LRBaseDbi RSQLite]; }; LowMACAAnnotation = derive2 { name="LowMACAAnnotation"; version="0.99.3"; sha256="0ri301ci54s8wwkah1jccy5h44xg8yjk08j5b15qmdsm25hli4wm"; depends=[]; }; LymphoSeqDB = derive2 { name="LymphoSeqDB"; version="0.99.2"; sha256="1cdyn2imjh4zr23szndc4vwyiacxs1jsp14gil2dyq9aifa25qr7"; depends=[]; }; MafDb_1Kgenomes_phase1_GRCh38 = derive2 { name="MafDb.1Kgenomes.phase1.GRCh38"; version="3.7.0"; sha256="160whyhwjspqji6ys19qgi4y3k7z1qqzr75nhpw0yl8h1rc6rfg0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; @@ -148,86 +164,91 @@ in with self; { MafDb_ExAC_r1_0_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.hs37d5"; version="3.7.0"; sha256="00b022hzwr0l6m9wzw76iirdq5szvi5z8a9yi2i44sydhwqsb4cy"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; MafDb_ExAC_r1_0_nonTCGA_GRCh38 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.GRCh38"; version="3.7.0"; sha256="1dvzzwj9dhrls8caabdcgddsk64a6q9jqcya424h8n48fkx6fpjn"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; MafDb_ExAC_r1_0_nonTCGA_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.hs37d5"; version="3.7.0"; sha256="10rn7nqrnhmhdqcygi8l3cwf1385jyy56qzqjgqyhvmi4g8dnjsn"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_TOPMed_freeze5_hg19 = derive2 { name="MafDb.TOPMed.freeze5.hg19"; version="3.7.1"; sha256="0a8rgh3lkbplg3y1yl0804f55dlw7v8lcb33ygg8kg39dk60m102"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; MafDb_TOPMed_freeze5_hg38 = derive2 { name="MafDb.TOPMed.freeze5.hg38"; version="3.7.1"; sha256="1kxk3qqw1igkygqmj8yjl4cp99fan1w84gilh6q35nsaja0fapa8"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_gnomAD_r2_0_1_GRCh38 = derive2 { name="MafDb.gnomAD.r2.0.1.GRCh38"; version="3.7.0"; sha256="0dp82x6dag4ndizvppr2g5x1v8sbj08r6n7mi98c89fn4f7nvqqw"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_gnomAD_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.0.1.hs37d5"; version="3.8.0"; sha256="0kb50g4kmj1b4xm9p8q6j1yzpv5ygxf71vqhkb7c0ajqffqbyznm"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_gnomAD_r2_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.1.hs37d5"; version="3.8.0"; sha256="00ld23685xlrkx9rpgrcqaycq3zxbxqg734r99avrw8p3lmj4fvc"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; MafDb_gnomADex_r2_0_1_GRCh38 = derive2 { name="MafDb.gnomADex.r2.0.1.GRCh38"; version="3.7.0"; sha256="0hwyyqa4g3hp85hk4b6qfzm10yk6h20sh0f2mf09yr0hpmkjyl59"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MafDb_gnomADex_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.0.1.hs37d5"; version="3.7.0"; sha256="1y1kzbs37h804c81rll64kz83rpzmzl1z410frabyyblpxm275j5"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.10.0"; sha256="0dc2j64v93j7gj28yl9lpbxdqlqszr8sn3p7jbkcwixgpczhqzbj"; depends=[MeSHDbi]; }; - MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.10.0"; sha256="1p0495kyg2vcbf98scfxb1iidn4xvv1r1jwxx40g1fjwl1s0rm4k"; depends=[MeSHDbi]; }; - MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.10.0"; sha256="0ipnzigw2791fgzr6s2a8m4idpicwlk46pplq9q3ql9ss0nw4swi"; depends=[MeSHDbi]; }; - MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.10.0"; sha256="1kpr0li13kwn2ynnghaj775ln7zxim8jdasbrmnyrq8b61v1784s"; depends=[MeSHDbi]; }; - MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.10.0"; sha256="0aa6qgk9vwdkwykkml10j0vcjp53ypa2p3p8za9qgfk0r19831wi"; depends=[MeSHDbi]; }; - MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.10.0"; sha256="1v81wccvd2kgx05h2lffbdjkl8xsdb0f5h2i12csfnlhfgvgasdf"; depends=[MeSHDbi]; }; - MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.10.0"; sha256="0caii8lq500rc5kaqq354zldrb2b0zapypqzr6kfh4swa6fa90x5"; depends=[MeSHDbi]; }; - MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.10.0"; sha256="1x33f3g8951kawq3j1p1aic9jlx10dbf8qb1g0yrcrq1nvxnywlq"; depends=[MeSHDbi]; }; - MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.10.0"; sha256="1inpqz39ingljyjsp9v7mfvx8jcmmmkc3p3k4ffcw9xfd17iiw9s"; depends=[MeSHDbi]; }; - MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.10.0"; sha256="1bwmy42s7rvnng5p1lqcbjhxvw42pr9gbyp7r1951n69f1311n45"; depends=[MeSHDbi]; }; - MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.10.0"; sha256="1fw30l682sfcpdqqg8r5vyk0slxx00k1agxgli1syhvhh1hrbnxx"; depends=[MeSHDbi]; }; - MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.10.0"; sha256="0xgzsvqr62g8gipz1i73mxrbg8784axc6hj82v034i03zh0kz2rp"; depends=[MeSHDbi]; }; - MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.10.0"; sha256="136cg8nmwhc6iplzj2wxmgy4nggi3532xv3kff0hx85g5nbj6k6g"; depends=[MeSHDbi]; }; - MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.10.0"; sha256="05wj3ib1xjiy2asz41h32r29371qyd8dc3xrx78wwfj2a7760b4y"; depends=[MeSHDbi]; }; - MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.10.0"; sha256="1b8jc8gc62knhkl0g6isx6d0kb2b33mydb0wpp3v0xlmzpv3f4qn"; depends=[MeSHDbi]; }; - MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.10.0"; sha256="0qiwjxrjz7np4ml2hxdqfqmjaql5hgnzv2919rcxfikp5cxq7b51"; depends=[MeSHDbi]; }; - MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.10.0"; sha256="06vk6imry285qcmgcrjqlxj0ihxqasg94ap18xcxiwwps1dbha89"; depends=[MeSHDbi]; }; - MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.10.0"; sha256="1xv54fhn44l3kjgbmrga3lfqjjf3zgwprm0j518qlvycxvr41znr"; depends=[MeSHDbi]; }; - MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.10.0"; sha256="0582xmkwmpr3hjsh9qzv6q60bypdmrk34rcp0jzzqjnfrn9mxasb"; depends=[MeSHDbi]; }; - MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.10.0"; sha256="1cjzilbbw6r5sayy8bifx9rrbj3y95yzm8vdpxg5y1kvsa8047y1"; depends=[MeSHDbi]; }; - MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.10.0"; sha256="099s4v5rr0jpzh8x60cjb7rxz8c4f8m2s3r09cgzi1fxpmmlzspm"; depends=[MeSHDbi]; }; - MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.10.0"; sha256="0apr6i080wkhb5s5h6v64b40wdx6fygn422vllwicjkqxllbaa4x"; depends=[MeSHDbi]; }; - MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.10.0"; sha256="1ln50lqba33vsvbk6wydgm2akpnvv92305zxcpbl6d2px0xbjldz"; depends=[MeSHDbi]; }; - MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.10.0"; sha256="0nwag2828j1hqx6biihnpprzbrimc7as3nn3p4kkhs067bz457ny"; depends=[MeSHDbi]; }; - MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.10.0"; sha256="1bcqyrcff510l5my5wha0yrl76wznm7xljlbv24q1i2mjb00x087"; depends=[MeSHDbi]; }; - MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.10.0"; sha256="1zsq4fkr2bqcfdf1v5w3gn5x29f1q9y4b4qx7nhiipfwiybnjdpd"; depends=[MeSHDbi]; }; - MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.10.0"; sha256="1xr4h3d3fs20cfwzaj1jjipfnbbvgmx7rlmxfvv8q8hxpfzp7vsp"; depends=[MeSHDbi]; }; - MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.10.0"; sha256="1hjywgbgbpgsk8hhwlfz9phx3hwi14j9yxa8zmbas3w9cf9hg35a"; depends=[MeSHDbi]; }; - MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.10.0"; sha256="05mhyfjj2m1mx575nyc53lrwhj0lip4bcv5xa37swz7n1x821bnq"; depends=[MeSHDbi]; }; - MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.10.0"; sha256="03vrcnfcpj1ayrfawwqgvdvb7mymkwng36pr8p491l8vmk4yhsgs"; depends=[MeSHDbi]; }; - MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.10.0"; sha256="113zcn037fx15g5xipz9bczw0b913yd8sp4l3yg8zffai8qmhwcj"; depends=[MeSHDbi]; }; - MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.10.0"; sha256="00i6r7fhqrnbyxmkcpvsyhm1wzmskmrqnfsvd7ls0xcw3h6lpp7v"; depends=[MeSHDbi]; }; - MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.10.0"; sha256="1azyzg3ak01mbgdw8l7csgiwpzd5fwk6h3x8n261xxm1yd5f1g9l"; depends=[MeSHDbi]; }; - MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.10.0"; sha256="0j7rga9n6gl6k1gh5ppz742gy4swriwwnfavrjam6k6inl40as57"; depends=[MeSHDbi]; }; - MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.10.0"; sha256="0cibmy5hyg7aw960cb9zbqdaabbh9f5mwlxdv9gynghkxrqppcaq"; depends=[MeSHDbi]; }; - MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.10.0"; sha256="1yw0kamb6j25cv3fz7649n43slaxah0f6yzwhglsa4fjffam1ycm"; depends=[MeSHDbi]; }; - MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.10.0"; sha256="129yw8yrm89rv999va8pn7513c0dl1r1xffsdc01i4wadhq3rrx0"; depends=[MeSHDbi]; }; - MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.10.0"; sha256="17faizllk30rcw66arfr2nkcx4a70vkjzsca1zf7wpl9myad1r3q"; depends=[MeSHDbi]; }; - MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.10.0"; sha256="1hqm92vmrg5s07dkr1xa7a2jwspx90v969piba3cf6gdmjw81p5j"; depends=[MeSHDbi]; }; - MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.10.0"; sha256="06cvyg8ib4dkcn92br7wkx9bj36dji9lsn53aliyj6h5sq6ssvfn"; depends=[MeSHDbi]; }; - MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.10.0"; sha256="11q2gv8c5cv7ll22f6w34pqr7r8jzgkx1bhwl4fj49s8n7rfh0cg"; depends=[MeSHDbi]; }; - MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.10.0"; sha256="1gw20014wcf67n574p6r7cwcchyk3c915bbkqcwkj25bvvk4cmga"; depends=[MeSHDbi]; }; - MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.10.0"; sha256="1hh81rhr3iq8a98w7lvbz6cwjq0hfcxrazv7sdy0pjggd12l991r"; depends=[MeSHDbi]; }; - MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.10.0"; sha256="0p6zhf5fjh5bn1ibmmmjmnpfp2vplx84fa1zbs7djg96vpvz8flp"; depends=[MeSHDbi]; }; - MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.10.0"; sha256="1f497wkvbgw11887gsbcygi38xj2fb4vxg34k3jf668yq1x25jcm"; depends=[MeSHDbi]; }; - MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.10.0"; sha256="1mfg8vbqgqbb573ddv7pp3k2nl4gq27jc472rp4y3x4g8b2ci5hv"; depends=[MeSHDbi]; }; - MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.10.0"; sha256="1l27hl4cl1h02k9al51485f61qlwwqmsgyp46dcvvdg1l8hlckmq"; depends=[MeSHDbi]; }; - MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.10.0"; sha256="0vvkgbvg6kzl4w8jbvlvaawkxc2j3x1pipqf6q4niy0yk951r30r"; depends=[MeSHDbi]; }; - MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.10.0"; sha256="02mp7q0g7by8ihjpjwc39d6kwnwpxkn6xhx9v6fzdfy4q558qpnk"; depends=[MeSHDbi]; }; - MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.10.0"; sha256="1248y32km28aaj92caar8c97bmkml7853l8xp643vxawgwlmc7a6"; depends=[MeSHDbi]; }; - MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.10.0"; sha256="09576k1m19mjsdm17iw78djn9pb21g5i237rqrdk709rifar6nny"; depends=[MeSHDbi]; }; - MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.10.0"; sha256="0azrd1jmyyk6n9whgc3jdaqmalqal3vw6sx5cr84m9cbv9b9c9s1"; depends=[MeSHDbi]; }; - MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.10.0"; sha256="0cgq3caxikrv22y19fg4gpphz4cf3xb2w0s0rsnmwb1bkj57y2x2"; depends=[MeSHDbi]; }; - MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.10.0"; sha256="1w118c82694wplqr5q7wvzgcdhf9cm2cbyhajlvh9iad089m4cam"; depends=[MeSHDbi]; }; - MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.10.0"; sha256="0ka2fsmznlaxn24sqg5fvfy7y9plwqywr75hxfxls3dcykhvsn4r"; depends=[MeSHDbi]; }; - MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.10.0"; sha256="0cqwnjz77r5faf0gi39hg802hxwswzab56m8l55w9paxq4p5n1jx"; depends=[MeSHDbi]; }; - MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.10.0"; sha256="0gjnbah7ik8sarx05y6hzl94s669j4c8gxi5n6fa6pb9b4kilqfw"; depends=[MeSHDbi]; }; - MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.10.0"; sha256="11gfdh385vcyzwwszj8fjfbw06ksra677fhmj99f4nrbnvbdjlc8"; depends=[MeSHDbi]; }; - MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.10.0"; sha256="0yb0qg11fwpk47kb06w4ck518jff9x2j4kkfi254lbn7asawlgv3"; depends=[MeSHDbi]; }; - MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.10.0"; sha256="0fzcg6m73qa1fzzbq0kqir69axxcgilr0r3kgajrh8hfdrqvxhx2"; depends=[MeSHDbi]; }; - MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.10.0"; sha256="0kmsmdpvjnfa2wqdpka70wl5cbpf7bc0bvnf2lj559sdg18glr0d"; depends=[MeSHDbi]; }; - MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.10.0"; sha256="106wa8vv3v13yn3c3dfbqsp5gm8g2bh1r5yc6kynp3pyxxwnmmpi"; depends=[MeSHDbi]; }; - MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.10.0"; sha256="000p0jvdwxjkkzh94llzxbhdp5q76d3n8wbgk7iblxwm7aq48q4l"; depends=[MeSHDbi]; }; - MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.10.0"; sha256="04mn9gihl6zdv7d05f7q2jvr9xh6f2276p38rxq13xyh1y797lsf"; depends=[MeSHDbi]; }; - MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.10.0"; sha256="1h8x4jwcn0dra927nb5s0dq2w4rv8vdmf82vd17xpj46f051k10m"; depends=[MeSHDbi]; }; - MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.10.0"; sha256="09s2q794zylkv7ac73dja8cm3i33dv334dzyppw4d3hjdc7fbb8h"; depends=[MeSHDbi]; }; - MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.10.0"; sha256="1dbhnyppwq1hhs71a123c0l3zlvmgzys71wlihvfp9cbz65cav6p"; depends=[MeSHDbi]; }; - MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.10.0"; sha256="0m3pa3nap2z0sdw0fcx74jly8rkpvrqjzjhjqbck86zirzw48r82"; depends=[MeSHDbi]; }; - MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.10.0"; sha256="000d65ba942dqk73jbp7hf8jkq5jhvy5b3xqqbmqjp0a3m1pm6ln"; depends=[MeSHDbi]; }; - MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.10.0"; sha256="16294ss0i9vpsxapn0m6awf7bl8nglh6ir2i0z47985vaclzx86x"; depends=[MeSHDbi]; }; - MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.10.0"; sha256="050lv051549bcx1n7hlbgh76wxwmz9yrdn0582ixmc240jvgg8xs"; depends=[MeSHDbi]; }; - MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.10.0"; sha256="1nhnqljin6ia8ra6ma3hkabsnm7vqad411a6bb16yfn9c384c0x9"; depends=[MeSHDbi]; }; - MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.10.0"; sha256="0zg433hj5f0l7lls4172lv3f3vnr90gc5fxiifpviam2ibv1r114"; depends=[MeSHDbi]; }; - MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.10.0"; sha256="08yzw25ahckffy6sqwp0qbsp79jr00dk2qgs0g7k3yv7j86yfla9"; depends=[MeSHDbi]; }; - MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.10.0"; sha256="0bkd4skxdv3ffhq21j74ghg1ksgd0666rbj89d3c01dyn0dhb1lv"; depends=[MeSHDbi]; }; - MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.10.0"; sha256="0zhkq8skl4ahbqims1s72m5mf59lvjvzz1x6fg9kwbskfv4y3i93"; depends=[MeSHDbi]; }; - MeSH_db = derive2 { name="MeSH.db"; version="1.10.0"; sha256="1vh7r2din6746z2v4z42inhyyhywi9lahwszm6z42rirzxhcg3xz"; depends=[MeSHDbi]; }; + MafDb_gnomADex_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.0.1.hs37d5"; version="3.8.0"; sha256="0xz6ayip0cdbal6gsc8wpjyg3rr1kadaddv8flw5k8ky84mckzbc"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MafDb_gnomADex_r2_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.1.hs37d5"; version="3.8.0"; sha256="06vicw9z05j1pw30sw0f2nkcixc14yn3anq0g3317i3rb1kvmwid"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; + MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.11.0"; sha256="02ysykmbn1b6rv3fbq71g9lnv16gvxyvb9p9smvm0k9brb7s0q24"; depends=[MeSHDbi]; }; + MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.11.0"; sha256="13x69ki5g99hravrfdll98z2n7nghvf02v920q4g2bgjzzh68sks"; depends=[MeSHDbi]; }; + MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.11.0"; sha256="1sffv89v1vrlgy36kf7q7ixnc2iwfaa2h0dsxrg0pjmzsq669h9s"; depends=[MeSHDbi]; }; + MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.11.0"; sha256="0ssivaq31rjagw5sdjg9ai3bm73mdvdrkqz0snf3phdgxpvldqms"; depends=[MeSHDbi]; }; + MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.11.0"; sha256="0cl95vipqcjf1pb9bjzvxa4dc0d5rzac84n9f6l061vhifa2c3pn"; depends=[MeSHDbi]; }; + MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.11.0"; sha256="190h3pch16bzx0h674kwywcy3pr1y16jbzczbmmvsxg1l2j549zm"; depends=[MeSHDbi]; }; + MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.11.0"; sha256="0w6gq9xy1v84ksbd849jpj073s51fbhgss8wl6ax4ybxvfp22m0s"; depends=[MeSHDbi]; }; + MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.11.0"; sha256="0jdxvnhxrajhd5dr6hzfii7b1n6x874qfc8999pw8y8rwh8c4ln7"; depends=[MeSHDbi]; }; + MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.11.0"; sha256="0vqyanf9n9ji77zkck3vyrrhm87hx3yxiy9fpwal6a0vh31vrjb9"; depends=[MeSHDbi]; }; + MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.11.0"; sha256="11f9jibxf0amhixhs2pvmx6ir1530qkm9xcjrj09hwyx687bs3z8"; depends=[MeSHDbi]; }; + MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.11.0"; sha256="03nbmbnbfvpja1p9rnqy1mpamlab0fd2y4fkx456jmnl87m1zk0n"; depends=[MeSHDbi]; }; + MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.11.0"; sha256="0pd9gigwrckz9drh3x7n9nvvcq2q2wwmczkhhkqlpp4qhg85yp7g"; depends=[MeSHDbi]; }; + MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.11.0"; sha256="1rjb9ldrn2jg73p2j9mjn61ljw83bhr07yq7482lp4mglhwvqibm"; depends=[MeSHDbi]; }; + MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.11.0"; sha256="14ywqllqgynwfxyxrkw2d6r7m2n82znx9s15l62d7jb88pvaajn6"; depends=[MeSHDbi]; }; + MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.11.0"; sha256="0b5b5dyh99gykdp3whdz7rjz1862p3w4jigy7s1bjmhv4pm3bn2d"; depends=[MeSHDbi]; }; + MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.11.0"; sha256="1cbwqyb4ja10j0250lggbpxgpivf0xj1m7hn4l687rdidxgrmy4s"; depends=[MeSHDbi]; }; + MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.11.0"; sha256="0b5q8yclcx18f8aq45ikv7qyw0xfsksjf1fbl6fprflvzfz2cnir"; depends=[MeSHDbi]; }; + MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.11.0"; sha256="1rd90rzipaa480sahh7pqlv1qzj1wcx543gkshj6mcfkr6r08zci"; depends=[MeSHDbi]; }; + MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.11.0"; sha256="0xg2mi60qlg76g1zxmybcixci8nivw4ld91qxf13jybcr0mwf9xn"; depends=[MeSHDbi]; }; + MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.11.0"; sha256="0l80s6v7p2n7p17chbk6a7y5y2b02z38x034jwg3yvyfqy073r11"; depends=[MeSHDbi]; }; + MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.11.0"; sha256="187zq75qz7jysz8jg5k5sgvxkrpvdyyi8xlsidi774nyb7z5d96l"; depends=[MeSHDbi]; }; + MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.11.0"; sha256="1aicyzgw5nx6z9q339cd1iabi7a1yjswla0j94anqwh783lqrpxq"; depends=[MeSHDbi]; }; + MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.11.0"; sha256="03rvcxawyhckg693w2ngnk3sljgz7idha6iqyax8p8wagl2h5ipv"; depends=[MeSHDbi]; }; + MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.11.0"; sha256="17d3ankadjsvddfqxqm3hnqcmsr2rknkbvraq6zpdl7xw3r21yfn"; depends=[MeSHDbi]; }; + MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.11.0"; sha256="1j3wsmspg7w30y04l173pihac9xg633w8zj2scz6jnph6rgxw3p1"; depends=[MeSHDbi]; }; + MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.11.0"; sha256="0640jfik9qp15h5180rn1afd2kv2wh5s0nbv2zjiz6089csb2fnf"; depends=[MeSHDbi]; }; + MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.11.0"; sha256="1y058sma4p48fj5f8v2i79nak5892pkk7rmr3i18jv44c8246zzl"; depends=[MeSHDbi]; }; + MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.11.0"; sha256="03dybrs5zhnil83jp37hq4rh8ybvyjnqpkr2vwa7f1kd65mq33za"; depends=[MeSHDbi]; }; + MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.11.0"; sha256="032kjhsm39jck9gxlg15g4x6n4r2iyi339vm6b9v4xcays45h9hi"; depends=[MeSHDbi]; }; + MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.11.0"; sha256="0h60gqkc4cjkbqs8i3x6z774qq4ihp20bssi70wli6fvsiysgbly"; depends=[MeSHDbi]; }; + MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.11.0"; sha256="1c8rg4h6gcs4y5gxz1z66a0ma3xpg4sdp6zwzcyrq02r2vjwj6ls"; depends=[MeSHDbi]; }; + MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.11.0"; sha256="03aycm5222wkx6rh7x204rkcxnh6amghm2zpzqiy4c5a2a871y9d"; depends=[MeSHDbi]; }; + MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.11.0"; sha256="0qqwwa3hk8ds2nv7xndqx4z9s00524sqrpgxh690yhdczn1ridqd"; depends=[MeSHDbi]; }; + MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.11.0"; sha256="1v47a80lvhhbl7sqx881nx1m4pqi6mprmgd03cvk4vhrgv74ji8f"; depends=[MeSHDbi]; }; + MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.11.0"; sha256="0mpabfvji1y1irgm5wkbinabriwbbb6wg6a0rc4mq5vn6j8nia36"; depends=[MeSHDbi]; }; + MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.11.0"; sha256="1sb0b82ibvk2n22a88c7qkmb3wch6zcgaah54p920dih2xxx24nb"; depends=[MeSHDbi]; }; + MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.11.0"; sha256="1i65691h3w34kvqswfkg6klpj8gm39p6csa8da4hlbwc7q58zzpf"; depends=[MeSHDbi]; }; + MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.11.0"; sha256="12yrsy71g0r6w028i56kxknkb4gr34x4d6064m61023234j31j69"; depends=[MeSHDbi]; }; + MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.11.0"; sha256="19ihdqwlrifd6nyi1bbxnjbq7qqb535d47mm5h0f1pz2h6w6jps6"; depends=[MeSHDbi]; }; + MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.11.0"; sha256="1f2f9vqdaqi6iak6yg3rcgcpvhaz76zl4hywnlz1gi7aszxiff0k"; depends=[MeSHDbi]; }; + MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.11.0"; sha256="075hhjahc34bznvmqrlc6vnlq25c4ybsyd6ry5qmnzccpxyqhgv8"; depends=[MeSHDbi]; }; + MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.11.0"; sha256="0c7kb73jrr74a05jgyf903bvy92pn23aklflnl2cqqwxqjc6f9hm"; depends=[MeSHDbi]; }; + MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.11.0"; sha256="1zg7c08z6j02sg74ff1q3hnmy5bszd6g5dyr0hxxqivx28bmirya"; depends=[MeSHDbi]; }; + MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.11.0"; sha256="1p70v5bvhawsh954mmnxiy734n0z6b0mfl4j3i2g3jijwrds9f6v"; depends=[MeSHDbi]; }; + MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.11.0"; sha256="0997k7iwq49sf2fn88lgx5j3rhsv9g7mldsm2bpsqmw52d8j568f"; depends=[MeSHDbi]; }; + MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.11.0"; sha256="16pxwy7yycdp59j3nvz58jc8h2y251b4prpk4nn589z7pk37hw52"; depends=[MeSHDbi]; }; + MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.11.0"; sha256="0dmdfi983i2sf56b06p7q1w7n8ik3j1dkfw1x1cc207wmmns4916"; depends=[MeSHDbi]; }; + MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.11.0"; sha256="024076n31mpz2fr7dbf5di6gxn1w1gajx95065vl4555zx46i9n1"; depends=[MeSHDbi]; }; + MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.11.0"; sha256="0rbnysb12i2f1a9xz0869m5n031j60c8bxnj1cp0zxlnylamf7w0"; depends=[MeSHDbi]; }; + MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.11.0"; sha256="1h9jz00bgz54nknl95jf60qqgmn5iyq766sdkxn7r54h9315c9g9"; depends=[MeSHDbi]; }; + MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.11.0"; sha256="1b4nhix3ky4d0cm8hix9m7chcgdyskvd0h7fj3k13a4zxyxvfw9x"; depends=[MeSHDbi]; }; + MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.11.0"; sha256="16fcswjrv056g5d6ikf2g8af470djf02pyxhp5ib6gk932vl7kp0"; depends=[MeSHDbi]; }; + MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.11.0"; sha256="08cdkyvwss0cczd6j19j02950jpqhhzi79y9swqnzzh3nydb3aqj"; depends=[MeSHDbi]; }; + MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.11.0"; sha256="09nigd6hc3iy3s2r70ixfyj04la8cnaxhvr5i1k0adapjgf4q1mx"; depends=[MeSHDbi]; }; + MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.11.0"; sha256="1cwhbrpiznkfbkxchpddkr68jzcxzn0mvn8cy81dm0vj4x8dxjb8"; depends=[MeSHDbi]; }; + MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.11.0"; sha256="0psaqhdi4hicy5vkngkh7ig5ndsjl768n9fg36zlvqllww58kfis"; depends=[MeSHDbi]; }; + MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.11.0"; sha256="0jdwxkwinbnvap0mpirzcd4zgfvhsmca2r57s2lzh2i1x24hxa4c"; depends=[MeSHDbi]; }; + MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.11.0"; sha256="16qcm0d8m53dkwfbcsygbm3xj7x6hblwpa4agds5vnlkb26m48qn"; depends=[MeSHDbi]; }; + MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.11.0"; sha256="1w3zqynqjv79ixxnmn3khvj3p6586nq48dx00rap6vzirmhzigqv"; depends=[MeSHDbi]; }; + MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.11.0"; sha256="0ryxhk5g07fpnnk72q5a2847k6w509956fcxnrvwvp7f98p3z50x"; depends=[MeSHDbi]; }; + MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.11.0"; sha256="0i1772rpq95ppzxa809ms1r65d9rk5vqhcl36ndjs2lhzdydw8fz"; depends=[MeSHDbi]; }; + MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.11.0"; sha256="0xgi89vzhxkmqx0y84i58jkxikksqdi64r82p59ir6l1anpyvvc9"; depends=[MeSHDbi]; }; + MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.11.0"; sha256="0g0fnackq1yjaw0b3ppzbcj0sfx288wm6cv57ly69svfg1n0wlk5"; depends=[MeSHDbi]; }; + MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.11.0"; sha256="1z29d19is5lq8rqrkk1dyifgn0v2i68pbw8i7dlwnnicj2sfpynb"; depends=[MeSHDbi]; }; + MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.11.0"; sha256="0dcxjlpc9diz1lvrkpbrab5zjz96r837x7ij9786966a3x458xk0"; depends=[MeSHDbi]; }; + MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.11.0"; sha256="0gpj4i2mls1qkyivxy2gk3b8w9vkxnwf2b0cpmbv5bvpjcsbw47i"; depends=[MeSHDbi]; }; + MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.11.0"; sha256="14knm1h8mp5qfjbny2wwkj772x72laxgymhsa04m78mb38qhypwq"; depends=[MeSHDbi]; }; + MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.11.0"; sha256="0hwgkq669g99yrkbpk3pjpxbz7q0vwvkcx3rrvdk9dnjinlbcn54"; depends=[MeSHDbi]; }; + MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.11.0"; sha256="1mz986apgfd6sn62wws948yi46r87fzaszxnv450fgc42l23l0jx"; depends=[MeSHDbi]; }; + MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.11.0"; sha256="0dvz5xbx6vdmqibpq8xmpdjfvvqw7iqq3w4d350sxj5kaw2afp5s"; depends=[MeSHDbi]; }; + MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.11.0"; sha256="08hyvaqsvdpcizsqr53ab6bfh1fnlsj8d62pq03lpgr96rlyqi8q"; depends=[MeSHDbi]; }; + MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.11.0"; sha256="0mid3qmv7kxc7kn69vbhgchvrbv4fig97nw9zxsbd0rj66abzas2"; depends=[MeSHDbi]; }; + MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.11.0"; sha256="1pwq58mm7ripnzxcn13k1y157pjasrv30xxmrrqb4rv55nk61vbf"; depends=[MeSHDbi]; }; + MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.11.0"; sha256="0qd75lkyrs864sy3sci3bablipn9gabk24wbriis9bi0qf7hccv5"; depends=[MeSHDbi]; }; + MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.11.0"; sha256="0djsx876h0xz0h8jhs6yad8iqqjlr72b0fxasqgh89zpfp2hkvwd"; depends=[MeSHDbi]; }; + MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.11.0"; sha256="08b92lhq2gbvbm7y0q4zc991wi1fjhm68n03b782h2g6syczmlma"; depends=[MeSHDbi]; }; + MeSH_db = derive2 { name="MeSH.db"; version="1.11.0"; sha256="1l6hynwmhb8p666q8n9dnvd0nhjy1f9nz2jg3z2p13dc5jl6syiw"; depends=[MeSHDbi]; }; MmAgilentDesign026655_db = derive2 { name="MmAgilentDesign026655.db"; version="3.2.3"; sha256="00d0yjcb5id7zacx4bzdwy4q6f4qvnnx8ph4d4xz1fmcbspz2qiz"; depends=[AnnotationDbi org_Mm_eg_db]; }; MoExExonProbesetLocation = derive2 { name="MoExExonProbesetLocation"; version="1.15.0"; sha256="0bvj3bji4bwwmxjz4b57n1aqypdibdmry30rfwmlxss1hav96sl7"; depends=[AnnotationDbi]; }; Mu15v1_db = derive2 { name="Mu15v1.db"; version="3.2.3"; sha256="0qchqkbx6ybijab8qhflxj33kwksfll1d3d3917vydjac9fzw1lz"; depends=[AnnotationDbi org_Mm_eg_db]; }; @@ -236,7 +257,7 @@ in with self; { Norway981_db = derive2 { name="Norway981.db"; version="3.2.3"; sha256="04ngc2hilqi9m7933mnm7jcvkxlz68vqqh5b628db575vcxql9b9"; depends=[AnnotationDbi org_Hs_eg_db]; }; OperonHumanV3_db = derive2 { name="OperonHumanV3.db"; version="3.2.3"; sha256="082gff88cwk2p50q8g9bixggacaclgqcvk6w5dc11h9fkgvd160i"; depends=[AnnotationDbi org_Hs_eg_db]; }; PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.4"; sha256="1vl8anixkhcb9axlszk479yaw48bz1hhgmff41nqk8k8w4jkyn1y"; depends=[AnnotationDbi RSQLite]; }; - PFAM_db = derive2 { name="PFAM.db"; version="3.6.0"; sha256="1zlrwps1kwl2h0cmvh0qqmn93n2md6yrkm47nz2vy080dry0q0ix"; depends=[AnnotationDbi]; }; + PFAM_db = derive2 { name="PFAM.db"; version="3.7.0"; sha256="0ih3xz8vk80xzqwgv6ff3rp1a24qhwd1v1frkq1m6d981g7ymdap"; depends=[AnnotationDbi]; }; POCRCannotation_db = derive2 { name="POCRCannotation.db"; version="3.2.3"; sha256="0ybvs4hrxpivdkhm0fxpib11vlxqqdk8prlyj78vj5qzyb3iy89d"; depends=[AnnotationDbi org_Hs_eg_db]; }; PartheenMetaData_db = derive2 { name="PartheenMetaData.db"; version="3.2.3"; sha256="0d37c5b7s3fgkkvg7sj7gl9ksrjk5pyyv54vkys8w3qwgsm8yrdz"; depends=[AnnotationDbi org_Hs_eg_db]; }; PolyPhen_Hsapiens_dbSNP131 = derive2 { name="PolyPhen.Hsapiens.dbSNP131"; version="1.0.2"; sha256="1kikygkli41sn3rqihz0924prmqg2264ifj29vmg1a7qccm0kf7c"; depends=[AnnotationDbi RSQLite VariantAnnotation]; }; @@ -257,38 +278,39 @@ in with self; { SNPlocs_Hsapiens_dbSNP144_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP144.GRCh38"; version="0.99.20"; sha256="0yxmsnxncr7w30r0d7bg5i96pclm2vf40p9jdqa02rc67a6sximn"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; SNPlocs_Hsapiens_dbSNP149_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP149.GRCh38"; version="0.99.20"; sha256="17bv25p1261hn9d7mxfp6pvivj15pxyvr92gms8a8msfqg9y0xkb"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; SNPlocs_Hsapiens_dbSNP150_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP150.GRCh38"; version="0.99.20"; sha256="0jkwwgxxpm9ry8kizq8hs70sky41pks1ag40y5aqq91yjbpqlckj"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + SNPlocs_Hsapiens_dbSNP151_GRCh38 = derive2 { name="SNPlocs.Hsapiens.dbSNP151.GRCh38"; version="0.99.20"; sha256="19mmzlg76hh0imrqf135kcbwxkmm403gj9y7wk6ij9k12afr9kfz"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; TxDb_Athaliana_BioMart_plantsmart22 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart22"; version="3.0.1"; sha256="0j2zr4cddad7z1lxx9m9kfgyy7jajjnblpk9j8igd39ia3ixrpzc"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Athaliana_BioMart_plantsmart25 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart25"; version="3.1.3"; sha256="0a6v0l6p13zmiysi3k8dxzdlxng552qqj9rnlbdavdiidla0pvm3"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Athaliana_BioMart_plantsmart28 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart28"; version="3.2.2"; sha256="1yjyvrbx55y024lqg3b2rlf8pngqw5xi3p83j5ipan05wf0aq6ir"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.4.3"; sha256="1i4r6gmw2kv67hiwc5k2f0jzh87nx2l8q8ksxqy9hdn1q5wpsrxl"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.3"; sha256="1q68ds8j7m4a1sagn1ypc6p7qqdkdvmhjg7z57ksdl3w4rhkk1w9"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.4.4"; sha256="18gmx57savyvvdkgnrvmc4xj3xrakybyx4pkfmpabnqy29z6n71q"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.4"; sha256="04jcx40z2380x760wbl686zvm780y38kls1js215jhmw7hff8md5"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Celegans_UCSC_ce6_ensGene = derive2 { name="TxDb.Celegans.UCSC.ce6.ensGene"; version="3.2.2"; sha256="1sgppva33cdy4isj2is8mfalj5gmmkpbkq9w1d83a4agcq31mi90"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.4.3"; sha256="1yh4cp509rfw5xj0la49gyxy26l8fasap7dhianhhfnsdqkayzrs"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.4.4"; sha256="1rl7yc2csc3fs2iri0kkvpjv34jnhkzc0jhh2a3hnyvhv55lzmf0"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Dmelanogaster_UCSC_dm3_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm3.ensGene"; version="3.2.2"; sha256="1337x23rdmiiza83ms225kri37h16q5hw1lw0m577abcgip3d7c7"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.4.1"; sha256="0sdw0gbk84lfjmiyy2x4q01zh1vbjq3vfziwxkb4h0v6nab63k01"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.3"; sha256="03awii2bq91glqwklr0m48p6qlxq4rij39ncq2f6sbzw5iqqjjbr"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.4.3"; sha256="1a17401a8lfkv7acxxsh02yrmrmw7mj3207jgrcxjmbd6sicymy8"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ggallus_UCSC_galGal5_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal5.refGene"; version="3.4.3"; sha256="124hdrj3n77pw7jkxfga8b4flp5xlzynn50fpfjh163jkdb6r9ij"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.4.4"; sha256="18nwjnkbrvrkk6g5jns3h55874hk92fdbrfyjvvxk4daw0p7gii8"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.4"; sha256="1ck4ymlxj0fjrbgxzgdqgbyl3z4nqyc6bczw1cgwblmcv52h3cj0"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.4.4"; sha256="1cxdrdg3pqwi0rfk5bzik05r1hvxwsva862b7cf7pfcf202dkqg5"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ggallus_UCSC_galGal5_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal5.refGene"; version="3.4.4"; sha256="15laq4kdm85755lk176lqsi2aryi9i85b4c1arrj4qgjkjrbylvq"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_BioMart_igis = derive2 { name="TxDb.Hsapiens.BioMart.igis"; version="2.3.2"; sha256="0590a2hkrpm33hmjg5g0gm6sig3xvc09m0q6lwmafgaajf90h6ky"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg18_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg18.knownGene"; version="3.2.2"; sha256="1yk9ggclkqqfzrdp8gcqyplvif824pa7df54ck5gb1xb9q5s975w"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg19_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg19.knownGene"; version="3.2.2"; sha256="1sajhcqqwazgz2lqbik7rd935i7kpnh08zxbp2ra10j72yqy4g86"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg19_lincRNAsTranscripts = derive2 { name="TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts"; version="3.2.2"; sha256="0bmbp7kydvviczw8axgxq2wdlwq6fdas90jk9bg56avjq5syws2g"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Hsapiens_UCSC_hg38_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.knownGene"; version="3.4.0"; sha256="0i0xw0mcn403r911ijqdnrwg9k5bspdnjibfjvnhxq4h8vcfprn5"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.4.3"; sha256="0g14rkxk44bzrhgl5xyfdb8lpq7m5iv95yk92inljz02qxinp9j4"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.4.3"; sha256="16cmwrij91hj10q3alcxpv0qrfah25z5x23m7lmzrgchsjd84rmw"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.4.4"; sha256="13nv7l71piwf0frnwplwbac82ad7vxbw31yrfnqvnd1knh7ns99x"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.4.4"; sha256="1qgm66hnhqb3jyal8s43yri96k1xwb3vamb83894n86bh2g6nlca"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm10_ensGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.ensGene"; version="3.4.0"; sha256="0saxi1fdiwd38sfvy1rynd3v44rbp158jv6sjqcivvaqnd84zg9s"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Mmusculus_UCSC_mm10_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.knownGene"; version="3.4.0"; sha256="08gava9wsvpcqz51k2sni3pj03n5155v32d9riqbf305nbirqbkb"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Mmusculus_UCSC_mm10_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.knownGene"; version="3.4.4"; sha256="01lgxc1fx5nhlpbwjd5zqghkkbmh6axd98ikx4b0spv0jdg6gf39"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Mmusculus_UCSC_mm9_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm9.knownGene"; version="3.2.2"; sha256="16bjxy00363hf91ik2mqlqls86i07gia72qh92xc3l1ncch61mx2"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.4.3"; sha256="0yi7lxvf6aq634nhdpyg0hxj8hab93fs9z8iw6janasb2b5any14"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Ptroglodytes_UCSC_panTro5_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro5.refGene"; version="3.4.3"; sha256="1ra1kjmqza1y6i018j8q46s4qa5hxnk1w2a0szip9sckxbj8xlab"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.4.4"; sha256="12fdcs4vv4l0d3sksdq76nwwj88f8psiy84rd1jhfw8kbxqrhh8y"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Ptroglodytes_UCSC_panTro5_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro5.refGene"; version="3.4.4"; sha256="00mirzp38iqm0l0py1a7mlslnbmkfzzk1krcg6jdyr8gan2sskpi"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Rnorvegicus_BioMart_igis = derive2 { name="TxDb.Rnorvegicus.BioMart.igis"; version="2.3.2"; sha256="1099vkk8g3lxbgjxsm1p1m3mjj08nsw282mqxgzpnrxf7m6jll76"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Rnorvegicus_UCSC_rn4_ensGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn4.ensGene"; version="3.2.2"; sha256="0gv8bynfxxa471ap069mjvfrb1d7a0c4w5k8hxkr4hnsm44mschm"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.4.3"; sha256="0jpkg9s3ghb61xn3i8x50h7wa0x2ixhzj09n6qk1y661ary5kac2"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Rnorvegicus_UCSC_rn6_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.refGene"; version="3.4.3"; sha256="15h2fgxjn92xfyj5yvm460ap7j6ayhkm6i5fgvqyhvgyarmss9a3"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.4.4"; sha256="1h9vmsp8lcr8yyvd1mjm81p8l660bjsx2kyhg3wm96izxgd4i7gn"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Rnorvegicus_UCSC_rn6_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.refGene"; version="3.4.4"; sha256="1k4g78kh52ppr4fd5z4bwzzgw8jg6j3zi129fnny4ks6zkadhlw6"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Scerevisiae_UCSC_sacCer2_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer2.sgdGene"; version="3.2.2"; sha256="0l5gcwhbvzx60p9hjhd31angamb0hkgdg2avga7341j77rd5pwza"; depends=[AnnotationDbi GenomicFeatures]; }; TxDb_Scerevisiae_UCSC_sacCer3_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer3.sgdGene"; version="3.2.2"; sha256="1sjwl7fb3l3zxxbk8gkvzxwdsind0xjj7kmh7dachm6fi17hpb3d"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Sscrofa_UCSC_susScr11_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr11.refGene"; version="3.4.3"; sha256="1lwr8yza22q2wqxdbcg37rn3aml5m96hp2m6rkxvs3g08q7wngis"; depends=[AnnotationDbi GenomicFeatures]; }; - TxDb_Sscrofa_UCSC_susScr3_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr3.refGene"; version="3.4.3"; sha256="0agd0vn7fb658srqkr3gzk2y8x86xrcsn4hxbyfp2jhiypx60zzx"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Sscrofa_UCSC_susScr11_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr11.refGene"; version="3.4.4"; sha256="1c6kbkp6iq6zzpg6wpnbgclp1vsdhh19g220va8b61jhgcccr2c6"; depends=[AnnotationDbi GenomicFeatures]; }; + TxDb_Sscrofa_UCSC_susScr3_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr3.refGene"; version="3.4.4"; sha256="1yvjwsq9cn9kyjir53n20fbi8nyf1m64zim18w5mv05w9rn86gdl"; depends=[AnnotationDbi GenomicFeatures]; }; XtraSNPlocs_Hsapiens_dbSNP141_GRCh38 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP141.GRCh38"; version="0.99.12"; sha256="0a27y0ngg760y5wwcja4dpd7cjd8h5zg1s2b3a1r54s21k65zny3"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; XtraSNPlocs_Hsapiens_dbSNP144_GRCh37 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP144.GRCh37"; version="0.99.12"; sha256="0k823fvqjmdkmd47m7wyra6jxmv8lnk2i1xl4pp0mh3zgb87hgfb"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; XtraSNPlocs_Hsapiens_dbSNP144_GRCh38 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP144.GRCh38"; version="0.99.12"; sha256="0d4q32ij2x4726wvw06sgmivid0n94vfdmszdyh607xlcahqxa5z"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; @@ -298,22 +320,22 @@ in with self; { agprobe = derive2 { name="agprobe"; version="2.18.0"; sha256="1vnawamcpz16na8nmlq2czfxcr325fwdnngxl65mmnbd0f4lmy3k"; depends=[AnnotationDbi]; }; alternativeSplicingEvents_hg19 = derive2 { name="alternativeSplicingEvents.hg19"; version="1.0.1"; sha256="1v714abdpzhwa450zr66s1yjpxl6lkwi3wjbwn8phn87cgf8rj7q"; depends=[AnnotationHub]; }; alternativeSplicingEvents_hg38 = derive2 { name="alternativeSplicingEvents.hg38"; version="1.0.1"; sha256="0im87mrh1n6kv84q6lm4y15lb93rih88zdpa0jms5az91lyvsf25"; depends=[AnnotationHub]; }; - anopheles_db0 = derive2 { name="anopheles.db0"; version="3.6.0"; sha256="04dgk9q3hsrh4fncf9w4hx8l7qjwcbhbh1cnnfny5y7cpfliib6m"; depends=[AnnotationDbi]; }; - arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.6.0"; sha256="10xvx3vfj10xcx4w6jvm2c09p6diqjwaspgvwl5lvcm1xxaghsmf"; depends=[AnnotationDbi]; }; + anopheles_db0 = derive2 { name="anopheles.db0"; version="3.7.1"; sha256="0f940ybh7kr30d9pkqhr0w2yrwsqa25yxbhzhlccn4a6a6svzcwb"; depends=[AnnotationDbi]; }; + arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.7.1"; sha256="1d7cnhbm44dv0g6mjv76sdr8dgni34fbffzkk95rqikdqag8s9cy"; depends=[AnnotationDbi]; }; ath1121501_db = derive2 { name="ath1121501.db"; version="3.2.3"; sha256="1zrf26cfhlmrb5pyfawwk4v8l1mflx8c43zsxrwkbmxzc1jnc7dv"; depends=[AnnotationDbi org_At_tair_db]; }; ath1121501cdf = derive2 { name="ath1121501cdf"; version="2.18.0"; sha256="1naq8f8dwgbmndx178nm2pw6hjx5ljx0w1wb4dfjifnl4bs5rqcc"; depends=[AnnotationDbi]; }; ath1121501probe = derive2 { name="ath1121501probe"; version="2.18.0"; sha256="0a2nd8zhp3ybis780l3rrmwcxskbl3a111g8w6m8qfwsw5vnlqg1"; depends=[AnnotationDbi]; }; barley1cdf = derive2 { name="barley1cdf"; version="2.18.0"; sha256="0rbij5cqr2sz33y5waybv85nrcgf70iwj5gk13g0xn9p1l1zxyn2"; depends=[AnnotationDbi]; }; barley1probe = derive2 { name="barley1probe"; version="2.18.0"; sha256="1kh5r748b4vkmvlfaclmrh07ypbrzgxn90liqfz1rwkabh6rfk71"; depends=[AnnotationDbi]; }; bovine_db = derive2 { name="bovine.db"; version="3.2.3"; sha256="1i8mgk60hlmvngb4c727wajix9mca9gfg0pzxrnfcjwi87rpw7fy"; depends=[AnnotationDbi org_Bt_eg_db]; }; - bovine_db0 = derive2 { name="bovine.db0"; version="3.6.0"; sha256="0183qqj03r2wd6s527403zyd9r0jd0yapffp9881xsd3pcn2n310"; depends=[AnnotationDbi]; }; + bovine_db0 = derive2 { name="bovine.db0"; version="3.7.1"; sha256="17q8hkfips8znwnkk062m8xsvcpaf6ynpf2jjszrcm02495vbw45"; depends=[AnnotationDbi]; }; bovinecdf = derive2 { name="bovinecdf"; version="2.18.0"; sha256="13mf0yy0dypkm5n2ghl04xm6ayb9bn9qijqhgynksghi7s2k34mb"; depends=[AnnotationDbi]; }; bovineprobe = derive2 { name="bovineprobe"; version="2.18.0"; sha256="0i4afa5dksnir2nfrfh2cynjm59sm6vfaqa9wyag8cxg7c2nlm1i"; depends=[AnnotationDbi]; }; bsubtiliscdf = derive2 { name="bsubtiliscdf"; version="2.18.0"; sha256="1rihrjim37b49rhqr4nxga8sp67qri9xqlqc141mhbngh6cw3iyl"; depends=[AnnotationDbi]; }; bsubtilisprobe = derive2 { name="bsubtilisprobe"; version="2.18.0"; sha256="0k99hvgaswn96x4yanvr9cy8bdy69sd5q7yp6dj9synxj7s1fcw9"; depends=[AnnotationDbi]; }; cMAP = derive2 { name="cMAP"; version="1.15.1"; sha256="0pzizm27rgcaic7wsh52z30v1jwarmz4cwh1mksbygp63k54mwiv"; depends=[]; }; canine_db = derive2 { name="canine.db"; version="3.2.3"; sha256="0wbyzhk827l49yxzimvznx9z6yag5nd4djm2hddysf5nk1ndapqs"; depends=[AnnotationDbi org_Cf_eg_db]; }; - canine_db0 = derive2 { name="canine.db0"; version="3.6.0"; sha256="1cn3s23h8g3a0h0i97v33qh6yz94bw9i8kzd6xwvgwkj0yinw1ib"; depends=[AnnotationDbi]; }; + canine_db0 = derive2 { name="canine.db0"; version="3.7.1"; sha256="1z691m0ap7x5sb7pbxlk8cs5s6hwvgvdbjjdxlfp8vilciwrsgwn"; depends=[AnnotationDbi]; }; canine2_db = derive2 { name="canine2.db"; version="3.2.3"; sha256="1gzd2x23dkfiwnwqz9pdn5lp4l8aby525mhscn3xakw633si4dvz"; depends=[AnnotationDbi org_Cf_eg_db]; }; canine2cdf = derive2 { name="canine2cdf"; version="2.18.0"; sha256="077cmmnhjdk0vxjzm1kqf3q5kgx6chwkm59dr4s5dy019rqb6sqr"; depends=[AnnotationDbi]; }; canine2probe = derive2 { name="canine2probe"; version="2.18.0"; sha256="1l849a1dqy4kpcsxs0lvb48ag81i0f0ys0w4757rw4kp8ry59z4b"; depends=[AnnotationDbi]; }; @@ -323,10 +345,10 @@ in with self; { celeganscdf = derive2 { name="celeganscdf"; version="2.18.0"; sha256="0a6w0a48azg0i21j3aqb7fnxck3ff9w3gsi89bnlfh0zx6pknx7p"; depends=[AnnotationDbi]; }; celegansprobe = derive2 { name="celegansprobe"; version="2.18.0"; sha256="05k7si3f8pzkyb8jv0r2vkavbrqxsn4nawl92gcphfsylrwcddqb"; depends=[AnnotationDbi]; }; chicken_db = derive2 { name="chicken.db"; version="3.2.3"; sha256="1rq9afkpcpv8qi75shvnsw8di3ycai4ylv7jq9zwj51zlwlw9cpq"; depends=[AnnotationDbi org_Gg_eg_db]; }; - chicken_db0 = derive2 { name="chicken.db0"; version="3.6.0"; sha256="1rkqdlnimxnvb8lwlw11w6iwsn42g11nbihj0v78rx9m0n7s6ik1"; depends=[AnnotationDbi]; }; + chicken_db0 = derive2 { name="chicken.db0"; version="3.7.1"; sha256="0jib8pamnqzppk2x1i8c7szrwvhhilsxbk2x83ajzbzk3df3rvnd"; depends=[AnnotationDbi]; }; chickencdf = derive2 { name="chickencdf"; version="2.18.0"; sha256="09hhim5s9xj7n2b5rhn1svf5qly2mn0rr2v2ls25hfzyrqcbxlz1"; depends=[AnnotationDbi]; }; chickenprobe = derive2 { name="chickenprobe"; version="2.18.0"; sha256="1fdsiwfyg7fwslrr7xs3gny7sw24bzg5k1fvlyzb1477sgj0pid3"; depends=[AnnotationDbi]; }; - chimp_db0 = derive2 { name="chimp.db0"; version="3.6.0"; sha256="121hzz3s816xhbv6rh87i9qas02j2k89cb6my22n9jhyf74r7nfi"; depends=[AnnotationDbi]; }; + chimp_db0 = derive2 { name="chimp.db0"; version="3.7.1"; sha256="0bgn2yjj1jg0dswn5m4n78lydlzz7qb8fxpm8pl7909xrkcd1lpw"; depends=[AnnotationDbi]; }; citruscdf = derive2 { name="citruscdf"; version="2.18.0"; sha256="1326mj1xf3k4v5iyyn46whx24qfng0x3cv6rvckdr1ycc1v887dn"; depends=[AnnotationDbi]; }; citrusprobe = derive2 { name="citrusprobe"; version="2.18.0"; sha256="0bf1wic136cxwgs4j13wsyqasnyvr0jw1hzg6qizndmy7g8hrb87"; depends=[AnnotationDbi]; }; clariomdhumanprobeset_db = derive2 { name="clariomdhumanprobeset.db"; version="8.7.0"; sha256="039bsywnim0nr8b3w6vkj4m20j0pggnm6ajjz24bnlikm9zzrs6l"; depends=[AnnotationDbi org_Hs_eg_db]; }; @@ -349,14 +371,14 @@ in with self; { ecoli2_db = derive2 { name="ecoli2.db"; version="3.2.3"; sha256="07vc5fl2zq2f65ndcldyzvwfpl65snp6ygvw658j4036lbb7cpjl"; depends=[AnnotationDbi org_EcK12_eg_db]; }; ecoli2cdf = derive2 { name="ecoli2cdf"; version="2.18.0"; sha256="1rkxrwadq9kg9685z9pg6rgc4bblkx5p3c6snsl4gv2k188dva9r"; depends=[AnnotationDbi]; }; ecoli2probe = derive2 { name="ecoli2probe"; version="2.18.0"; sha256="11q4ka0ncjapahic49xdl9919vm9frrwlqgj101krgkg262lfm8n"; depends=[AnnotationDbi]; }; - ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.6.0"; sha256="0l64cb1zqhz9wbm4chbapv9mzm9k0h9v7xzga3syydalzaqlln5l"; depends=[AnnotationDbi]; }; - ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.6.0"; sha256="129w24f8k7kg7h99jh6jgrvriy1avblz20dk13linhf9bk466vaw"; depends=[AnnotationDbi]; }; + ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.7.1"; sha256="075ngixclxh1qqgn5p1afxyx8610rfxj1ax3iqmbvqqlyq9nc9ar"; depends=[AnnotationDbi]; }; + ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.7.1"; sha256="1p3lvf92l44kqn47jhgwd6nqnjl0ksnvmsj1052lrbalh5xl3rcd"; depends=[AnnotationDbi]; }; ecoliasv2cdf = derive2 { name="ecoliasv2cdf"; version="2.18.0"; sha256="16i6has9qgmzakcy24racc1h9j331wndv5c87qp5r1zrai61zyav"; depends=[AnnotationDbi]; }; ecoliasv2probe = derive2 { name="ecoliasv2probe"; version="2.18.0"; sha256="1hfrnal170cdigc2fmnynb75jjsiq77p4x6ws9gah558hvx87nk3"; depends=[AnnotationDbi]; }; ecolicdf = derive2 { name="ecolicdf"; version="2.18.0"; sha256="18g5prjykn356k35m131ifn128k5mhij2x26balqav0azigzjqsn"; depends=[AnnotationDbi]; }; ecoliprobe = derive2 { name="ecoliprobe"; version="2.18.0"; sha256="17g5zxfzsak7a0w51irc0w1w2i5ngdkx9db6rhv1fyp8mfjgaphd"; depends=[AnnotationDbi]; }; fitCons_UCSC_hg19 = derive2 { name="fitCons.UCSC.hg19"; version="3.7.1"; sha256="19isa4x8js0pdb4k8a11bw3bzmzv6jc4jphzrvav7piqkvrgykzx"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - fly_db0 = derive2 { name="fly.db0"; version="3.6.0"; sha256="15kwa0yl7n0nc579xi3il7yyk4dpijsls34gyd17v8mi4v1a1kwm"; depends=[AnnotationDbi]; }; + fly_db0 = derive2 { name="fly.db0"; version="3.7.1"; sha256="0l617pksrcgb96bm25qsxlyjz7jp7hqk1sfba516l2gd2rvbp7rs"; depends=[AnnotationDbi]; }; geneplast_data_string_v91 = derive2 { name="geneplast.data.string.v91"; version="0.99.6"; sha256="0mc26d0sgmpmfmqsqinqv5k6vhg0hlc8hsjkcnvf369yav224nq1"; depends=[]; }; genomewidesnp5Crlmm = derive2 { name="genomewidesnp5Crlmm"; version="1.0.6"; sha256="06dmwnjy3gb53y6nr02dmp22qzfl5d63wppazrabcqbzwimhnvp8"; depends=[]; }; genomewidesnp6Crlmm = derive2 { name="genomewidesnp6Crlmm"; version="1.0.7"; sha256="16qcxa32fmbdcv5dck0grsnqyfcqql7wpxa1l6andv9hrvabv2jx"; depends=[]; }; @@ -487,7 +509,7 @@ in with self; { hugene20sttranscriptcluster_db = derive2 { name="hugene20sttranscriptcluster.db"; version="8.7.0"; sha256="0ba3yvizj9ya61rr9ik2hdxhy0q67908x16n58jjjfq8wf96h7sp"; depends=[AnnotationDbi org_Hs_eg_db]; }; hugene21stprobeset_db = derive2 { name="hugene21stprobeset.db"; version="8.7.0"; sha256="0chkxxpfl696qqiai3i30ylpsihyicbs0hbcni6nmnhfz9k5800g"; depends=[AnnotationDbi org_Hs_eg_db]; }; hugene21sttranscriptcluster_db = derive2 { name="hugene21sttranscriptcluster.db"; version="8.7.0"; sha256="0wk2lg74zkgxh6frmikhk4bxndiyvc1j7mhvz65w8fxfqiwfyf5i"; depends=[AnnotationDbi org_Hs_eg_db]; }; - human_db0 = derive2 { name="human.db0"; version="3.6.0"; sha256="050cwz99yz27gyrnfhkv474vqz5rfqbv2f7wdjnaphd9xxq8xjr4"; depends=[AnnotationDbi]; }; + human_db0 = derive2 { name="human.db0"; version="3.7.1"; sha256="1vikw70n828prccs1vlnw3f4rwp5lsp5cb02f56hih4n3mapky9f"; depends=[AnnotationDbi]; }; human1mduov3bCrlmm = derive2 { name="human1mduov3bCrlmm"; version="1.0.4"; sha256="1p7qpzk6svafgdafljhh4k0z7pcs78qmwwfd80r0a1yhkssmp0v9"; depends=[]; }; human1mv1cCrlmm = derive2 { name="human1mv1cCrlmm"; version="1.0.3"; sha256="1qlph3qrjv52ddzlj8pwa93zzh70x4mbdrdr7q9pan427lpck9gx"; depends=[]; }; human370quadv3cCrlmm = derive2 { name="human370quadv3cCrlmm"; version="1.0.3"; sha256="1chjx9vsmqz2whslw1l7jn7nfn7zx6pcjfmqqm9mh81i74rzrdik"; depends=[]; }; @@ -525,7 +547,7 @@ in with self; { m20kcod_db = derive2 { name="m20kcod.db"; version="3.4.0"; sha256="1p2sm5j4b50iqzwcb984qrh74c3hf6yml7b8mvxlhhhvxz4iy1np"; depends=[AnnotationDbi org_Mm_eg_db]; }; maizecdf = derive2 { name="maizecdf"; version="2.18.0"; sha256="0yfz5gjhsq4wz6j63s1b1hxjz03gsmrlfs2cdc8smq6azp3zdid4"; depends=[AnnotationDbi]; }; maizeprobe = derive2 { name="maizeprobe"; version="2.18.0"; sha256="01h5dv5i0zaqlphkii9ipxy9wswv1srgprrpr5vmi01c9d98qsk0"; depends=[AnnotationDbi]; }; - malaria_db0 = derive2 { name="malaria.db0"; version="3.6.0"; sha256="0874knxhybbi6idfb9rig3dhwb65xr7imkgqg1yl3scikyvpn37m"; depends=[AnnotationDbi]; }; + malaria_db0 = derive2 { name="malaria.db0"; version="3.7.1"; sha256="1ljk5xfshp96pibw9k1yb5cl664iashb9rhc1y1bjalyidraznk7"; depends=[AnnotationDbi]; }; medicagocdf = derive2 { name="medicagocdf"; version="2.18.0"; sha256="1clz679cc887x98c6jk93cphijkbg5r2nd9idrj5901yvh6p9n5q"; depends=[AnnotationDbi]; }; medicagoprobe = derive2 { name="medicagoprobe"; version="2.18.0"; sha256="0w6j1pfkvb3npc8srpjifq2ywnqxhc9q090jqzmkx22x36cw9cl5"; depends=[AnnotationDbi]; }; mgu74a_db = derive2 { name="mgu74a.db"; version="3.2.3"; sha256="0xd2gbvry061409kiwq99i13641g8x6m9kbgg4yr0x6m9dh7hxa8"; depends=[AnnotationDbi org_Mm_eg_db]; }; @@ -579,7 +601,7 @@ in with self; { mogene20sttranscriptcluster_db = derive2 { name="mogene20sttranscriptcluster.db"; version="8.7.0"; sha256="1s7cdjglrc9qqf3gsmhsyycfa0h5qrbk28i4z3z4mb9g6242r1r4"; depends=[AnnotationDbi org_Mm_eg_db]; }; mogene21stprobeset_db = derive2 { name="mogene21stprobeset.db"; version="8.7.0"; sha256="0l8y2zbhykzqs9hbjhj1cys1mzdjhmi4rjv4l3v0sv5969h6sl96"; depends=[AnnotationDbi org_Mm_eg_db]; }; mogene21sttranscriptcluster_db = derive2 { name="mogene21sttranscriptcluster.db"; version="8.7.0"; sha256="1mkw3997mqr7ssa60zpwhlyajda51smcrnlnxwif78g99yj0nrxb"; depends=[AnnotationDbi org_Mm_eg_db]; }; - mouse_db0 = derive2 { name="mouse.db0"; version="3.6.0"; sha256="0dxx2853blbsbxn65md4zlp59pdqj7wraiq39spxlbkail76yggp"; depends=[AnnotationDbi]; }; + mouse_db0 = derive2 { name="mouse.db0"; version="3.7.1"; sha256="1fyawqxf1m6cnl6p41q1bqb75k59n8ixn3kw8gf4kq34cldl0h9k"; depends=[AnnotationDbi]; }; mouse4302_db = derive2 { name="mouse4302.db"; version="3.2.3"; sha256="1wdgqawqzkr39xwl32cap4ksr59p7r7i83g82h1ss4q3lm58gxpm"; depends=[AnnotationDbi org_Mm_eg_db]; }; mouse4302cdf = derive2 { name="mouse4302cdf"; version="2.18.0"; sha256="1mpyma4x8zfs2fmmx57xw4cfs2cf9lhw71nc3icl72d7vmwidswc"; depends=[AnnotationDbi]; }; mouse4302frmavecs = derive2 { name="mouse4302frmavecs"; version="1.5.0"; sha256="04clwkfz1gqqwrnqbavkka3hv480w6vi6c4q947qqnhw8j5jjp7s"; depends=[]; }; @@ -616,25 +638,25 @@ in with self; { nugomm1a520177cdf = derive2 { name="nugomm1a520177cdf"; version="3.4.0"; sha256="0skd5b76si0vydzk5qhg4f1a1j655alxflm9sqci8fi8safwj96a"; depends=[AnnotationDbi]; }; nugomm1a520177probe = derive2 { name="nugomm1a520177probe"; version="3.4.0"; sha256="1n70k0mhv146983myjgk1cgkr9rmmcpqdv8wpkcr320qcvgf9bn7"; depends=[AnnotationDbi]; }; oligoData = derive2 { name="oligoData"; version="1.8.0"; sha256="1d1yfms3jv2c4s255xnh8yxwijrj35skw3nxds7l46y88lg3qn8y"; depends=[oligo]; }; - org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.6.0"; sha256="1bqwvg6shkx9764yz8qzy08yhqjajhzgbjmk9cn3fxjipk9v523k"; depends=[AnnotationDbi]; }; - org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.6.0"; sha256="0vfnfg0cn5iprrsyqn4gjsq9p5fz7imrl16v220497af9k9zg88b"; depends=[AnnotationDbi]; }; - org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.6.0"; sha256="1lixfs1w5bnaxc9fyrvwgz9ldp4kxslgv7lm4icvcn517q3knsi4"; depends=[AnnotationDbi]; }; - org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.6.0"; sha256="0jvmpm2yk4lr6cjdzqjq6dl4gjfgzb12v8xxws6a1gjbkwyirxd2"; depends=[AnnotationDbi]; }; - org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.6.0"; sha256="1xzwi14l2ia5701rzfxl3qmf6nzdlg1a6k4p2q75fxw7c43nkp53"; depends=[AnnotationDbi]; }; - org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.6.0"; sha256="0zljw8f7b1c1xlb0rpb3m9p1dj63q7m4ai5dp5qm26wjlhqyk0zx"; depends=[AnnotationDbi]; }; - org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.6.0"; sha256="0hj1zxgxxn7ljl1apmlnf2niyb5gjqjv8y0mb8961y8b2iq7wflf"; depends=[AnnotationDbi]; }; - org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.6.0"; sha256="0pqxbnry2k621szw7zpfg6yn1m3icz3l7l80xh5q4gc2vqri59i8"; depends=[AnnotationDbi]; }; - org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.6.0"; sha256="04gscsr3mrqdprn8jc2ns1mf3h9nm19zh68fayjf0kb1j91k8hdd"; depends=[AnnotationDbi]; }; - org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.6.0"; sha256="0jm7k4l8bxrbkhhn1bbc0l9622mszk6c2galrgc3bc091frz1w56"; depends=[AnnotationDbi]; }; - org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.6.0"; sha256="0jav4c8av85380lbra41m33ymqy0kx4czni0kn3cpsa3sfk3ij17"; depends=[AnnotationDbi]; }; - org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.6.0"; sha256="0l54hi68y6j5jjk88rgy7jhdcjbz6pg474kbpcj6x9z77i0mcfgr"; depends=[AnnotationDbi]; }; - org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.6.0"; sha256="1y60cvnw5a7nnxryyw97fzrpsic4napsidhrd61qpp6nkbc3aa73"; depends=[AnnotationDbi]; }; - org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.6.0"; sha256="08kfwsyi0bbmkfqyjgj4m04dmav9nzx6kskaw90ayrj2jv70ci77"; depends=[AnnotationDbi]; }; - org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.6.0"; sha256="198w077sifyzsrx2vcb8vbrlk6ln6q74lrgkh81sbwshik7nmy4f"; depends=[AnnotationDbi]; }; - org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.6.0"; sha256="0v2qx1hghlwsgf4lzax6wf3snc17ll4rrhq6za1cf1a0bgvjf28f"; depends=[AnnotationDbi]; }; - org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.6.0"; sha256="0pprpk91j95ycr7hnd6a1n0aflbn3ibaizl2n2gsfwyjs2vyzq52"; depends=[AnnotationDbi]; }; - org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.6.0"; sha256="02mldrxqmfwlf4fjlc6i9qv786zgr9cggwrfpkn5inj28hh6s29j"; depends=[AnnotationDbi]; }; - org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.6.0"; sha256="0p76dj2l9r1rsxq0yh9fsqp22z7jg7i9sq43v5kc32pfgn4nizas"; depends=[AnnotationDbi]; }; + org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.7.0"; sha256="101xvx62y1y2kbiv9j427879zhjindm1hzb9iscinmf10lwhyj8q"; depends=[AnnotationDbi]; }; + org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.7.0"; sha256="0i5dv4lc8dh27ipf37wk84y75fmnbja0bbllzbchb459c9bpwcf9"; depends=[AnnotationDbi]; }; + org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.7.0"; sha256="0vdfgh2yrawz8bbszgxl5vvq6iqvn25p5l01j7zhlmx035jcbfak"; depends=[AnnotationDbi]; }; + org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.7.0"; sha256="1w5br1ss4ha8wv4v2saj7cmbjc2jw0dyj2f2y269l078z31wcnaz"; depends=[AnnotationDbi]; }; + org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.7.0"; sha256="1y3kda375f327bv31cfp470546hvcdw5a8bl3z5h1dm6c556z7cl"; depends=[AnnotationDbi]; }; + org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.7.0"; sha256="1pqjrzlyg72bjpy8zsxvaglc7jsv176bnyi87xdajmkvsgxpm7b3"; depends=[AnnotationDbi]; }; + org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.7.0"; sha256="1xs5wsbcpy0iwbjyiv7fax57djqc529ai5fk1qfsdcvlja3cpglx"; depends=[AnnotationDbi]; }; + org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.7.0"; sha256="0ii3k9b0rr6bkb16m108if9liinw7md4mgh8fz4yd4gh8a7zcli7"; depends=[AnnotationDbi]; }; + org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.7.0"; sha256="1zcqbr4sds24mcggg71g4j6v0wp7fri75d1l0bhp0x245b9k5vnw"; depends=[AnnotationDbi]; }; + org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.7.0"; sha256="0lyzznrnyyw9lsdp58a0sc5jw2lrccsv44dvrza2ix8mx46gplis"; depends=[AnnotationDbi]; }; + org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.7.0"; sha256="1qxz9l80yg3qdqszs6dsscp7lrpfi1bgd0pxh9j7q34vprzwhdim"; depends=[AnnotationDbi]; }; + org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.7.0"; sha256="1i3nvrd3wjigf1rmgxq1p5xxc3p8v02h5gwi62s30rkrsyjjfjxx"; depends=[AnnotationDbi]; }; + org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.7.0"; sha256="1c6mwknyf8cq824qm3cax0a2l3wd2h9dw6pylhwm0x7viz2xf2iz"; depends=[AnnotationDbi]; }; + org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.7.0"; sha256="0s3ibaqvjw3sg1j22pfgzw1gcb9pv9b8a4livj9ph73jqhx03r5i"; depends=[AnnotationDbi]; }; + org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.7.0"; sha256="1n9qd34gjkjgbbz07h6ibzgbq9id81z6ni01vmaki3554gmfk3dl"; depends=[AnnotationDbi]; }; + org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.7.0"; sha256="10293py12jar1ab3s1b872c5gxpw9d2d5sxk4iq5g38i0gcf5gsc"; depends=[AnnotationDbi]; }; + org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.7.0"; sha256="0dwaw9v4c1d5wr6skaf97s013wqwqm31bybhggm1fm59aa6mkdwv"; depends=[AnnotationDbi]; }; + org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.7.0"; sha256="1s5zizma3ba00z8q1k9h4fajxwj3f2jg1034rfwqlhsscwrhv5ih"; depends=[AnnotationDbi]; }; + org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.7.0"; sha256="002i6aacrirvyzi14r26fgr6cqc0bfwn0wg83sbligp2dwqm0bb4"; depends=[AnnotationDbi]; }; paeg1acdf = derive2 { name="paeg1acdf"; version="2.18.0"; sha256="127pgxxp5wp3hgmafbzdzsk4gqnllq1m1gcsfyzkvpkvmbn4aa9n"; depends=[AnnotationDbi]; }; paeg1aprobe = derive2 { name="paeg1aprobe"; version="2.18.0"; sha256="0hbyd402wf9nzy2g93nhnf2zsi9jvhgfk0llxlyfk0kqxs0y4byy"; depends=[AnnotationDbi]; }; pd_081229_hg18_promoter_medip_hx1 = derive2 { name="pd.081229.hg18.promoter.medip.hx1"; version="0.99.4"; sha256="1h4925dmw0vfsnhllg55gswq3sxfmx9rcjzifdvgs9y27399psrr"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite]; }; @@ -811,7 +833,7 @@ in with self; { phastCons100way_UCSC_hg19 = derive2 { name="phastCons100way.UCSC.hg19"; version="3.7.2"; sha256="1jmc4k4zgkx5vr2plnidnd9bidlwlb0kr7mjg60cqjw7dq7jl1fa"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; phastCons100way_UCSC_hg38 = derive2 { name="phastCons100way.UCSC.hg38"; version="3.7.1"; sha256="0dka39rvx4d3wbcjypcgvc19s6cnxkkfywa4irv23kpibq1sjyv0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; phastCons7way_UCSC_hg38 = derive2 { name="phastCons7way.UCSC.hg38"; version="3.7.1"; sha256="105isdrb3nsy30wd8yy9vrrv8b7c8izc11xqqixg6rcriacd0rl0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; }; - pig_db0 = derive2 { name="pig.db0"; version="3.6.0"; sha256="0qiym7v0z6rr68191lj5hnkzdjc4k61cbjvzj59x5aygba6clm8y"; depends=[AnnotationDbi]; }; + pig_db0 = derive2 { name="pig.db0"; version="3.7.1"; sha256="06hwggby003y64mhrk4b48zxnh3csqi5hm9y42iccz17qs7j1jmi"; depends=[AnnotationDbi]; }; plasmodiumanophelescdf = derive2 { name="plasmodiumanophelescdf"; version="2.18.0"; sha256="1vs36091djinn3g6rjhmy9xfdyi58365zbcjc9mf50adnp2i5fq9"; depends=[AnnotationDbi]; }; plasmodiumanophelesprobe = derive2 { name="plasmodiumanophelesprobe"; version="2.18.0"; sha256="03hfq51nrpmx8ihc48jiih6bk99irrgal9x7i7mgcv8xd508gcsy"; depends=[AnnotationDbi]; }; poplarcdf = derive2 { name="poplarcdf"; version="2.18.0"; sha256="0j28czs936j2wgwp63qbwl1mjcflcrx7ir88jzxkkw7411ch1gl1"; depends=[AnnotationDbi]; }; @@ -840,14 +862,14 @@ in with self; { ragene20sttranscriptcluster_db = derive2 { name="ragene20sttranscriptcluster.db"; version="8.7.0"; sha256="135cgn92raa6f9yiw4k25rn04rpg5mdnf969l66x4s1jcc0rwscq"; depends=[AnnotationDbi org_Rn_eg_db]; }; ragene21stprobeset_db = derive2 { name="ragene21stprobeset.db"; version="8.7.0"; sha256="0lp4prymrm3cp8yq1hba9bylw22hcvlx7piqpvjx51hj79yrwdig"; depends=[AnnotationDbi org_Rn_eg_db]; }; ragene21sttranscriptcluster_db = derive2 { name="ragene21sttranscriptcluster.db"; version="8.7.0"; sha256="1b7s2r4w1yy2v3srs6n931zc64qf58nq4apmq2ag5nx50wspima1"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rat_db0 = derive2 { name="rat.db0"; version="3.6.0"; sha256="1dxmdc4pvr3bl5vc6pw10ddqknxs5ggmr1zvmxgrk8girgkpja1h"; depends=[AnnotationDbi]; }; + rat_db0 = derive2 { name="rat.db0"; version="3.7.1"; sha256="1k7vx0iihb5sgaicrxbv33fi7kjwqfskbwn37aj769nqxq66fx8h"; depends=[AnnotationDbi]; }; rat2302_db = derive2 { name="rat2302.db"; version="3.2.3"; sha256="0vj4vkx091m34xqjh6gv6m2iqszvn5rq3kvnpyq3fin5v42wrsr1"; depends=[AnnotationDbi org_Rn_eg_db]; }; rat2302cdf = derive2 { name="rat2302cdf"; version="2.18.0"; sha256="1748rc6yypd7y8wgr1qg632pcsxx0fkxjz6b3z4fhblgdllhy9wk"; depends=[AnnotationDbi]; }; rat2302probe = derive2 { name="rat2302probe"; version="2.18.0"; sha256="1zwjgbcb9d4ib6z1iyjz8x11lq0b5gqs08y6j3idb5wf3i2p521v"; depends=[AnnotationDbi]; }; ratCHRLOC = derive2 { name="ratCHRLOC"; version="2.1.6"; sha256="0mgk6lwvvdwjzjh4r1q1q6nfnx4vqx9iy6gmbrb9f31jf30hqnsb"; depends=[]; }; rattoxfxcdf = derive2 { name="rattoxfxcdf"; version="2.18.0"; sha256="0q84lfaxnnj2zbm5q8xswa1md15fjj4i0djnqr835ixzn7px4yqn"; depends=[AnnotationDbi]; }; rattoxfxprobe = derive2 { name="rattoxfxprobe"; version="2.18.0"; sha256="1kp159553rkcn9yh6x3yph3yjz2ja21wi9j5ax03qnhwlsl1x8ik"; depends=[AnnotationDbi]; }; - reactome_db = derive2 { name="reactome.db"; version="1.64.0"; sha256="1wwgi5wr8ax0wns32zkz92wzh8ivq3q19m4pxvs8rrgwnlbyp81d"; depends=[AnnotationDbi]; }; + reactome_db = derive2 { name="reactome.db"; version="1.66.0"; sha256="18kh68sx9825bi92904xcygjh9jsbxyhsp4ghw1wh160na65gy3v"; depends=[AnnotationDbi]; }; rgu34a_db = derive2 { name="rgu34a.db"; version="3.2.3"; sha256="1s2sd5bqlj4qhamhrnb9byxn8nc7z265mqy7zzkgxcd6a2k472vp"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgu34acdf = derive2 { name="rgu34acdf"; version="2.18.0"; sha256="08z9f16xp1m2mwl9vlmbffxl4zyyl8cgzf6wp66rrm32lvl0nbwq"; depends=[AnnotationDbi]; }; rgu34aprobe = derive2 { name="rgu34aprobe"; version="2.18.0"; sha256="1gjxyq9128jgv3ic386f84rajgf3wz7yi2dja80y0ff4m0a48dlh"; depends=[AnnotationDbi]; }; @@ -861,10 +883,11 @@ in with self; { rgug4105a_db = derive2 { name="rgug4105a.db"; version="3.2.3"; sha256="0lq8k95qm0q7j65nf16p3f09dn9zs87n3k561wxrgi2lb0pf6j40"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgug4130a_db = derive2 { name="rgug4130a.db"; version="3.2.3"; sha256="0zlcn9spw23bj3px9z1l2f5afn09zbr6rv0nbd2h6dd12wrvy1zk"; depends=[AnnotationDbi org_Rn_eg_db]; }; rgug4131a_db = derive2 { name="rgug4131a.db"; version="3.2.3"; sha256="1r272jf9cflf1yf4bznp4d59h7bd7adh1i3rf890h5ffc0xzf5cq"; depends=[AnnotationDbi org_Rn_eg_db]; }; - rhesus_db0 = derive2 { name="rhesus.db0"; version="3.6.0"; sha256="1vlqd4qk0wph3vmd125dw9iipgljf2s3i46kr7bjswj0k9k4385h"; depends=[AnnotationDbi]; }; + rhesus_db0 = derive2 { name="rhesus.db0"; version="3.7.1"; sha256="1k695lwbwznk4i03dqpfyk0nx4s9n1qlgh9ccfxjy591lraj7b4j"; depends=[AnnotationDbi]; }; rhesuscdf = derive2 { name="rhesuscdf"; version="2.18.0"; sha256="0q2alkxm80wkzaf0q80df27q30qkswybavz05x6ywsihbs9h0nb8"; depends=[AnnotationDbi]; }; rhesusprobe = derive2 { name="rhesusprobe"; version="2.18.0"; sha256="0fd8pvwvpcmx41k80nbccjxllh39fvjf7l9dr8facisl1x7gsfil"; depends=[AnnotationDbi]; }; ri16cod_db = derive2 { name="ri16cod.db"; version="3.4.0"; sha256="1xz533vxjdyxx1wkks0kgk6b90sxs44iqcsvyds0xcm573bx8c6q"; depends=[AnnotationDbi org_Rn_eg_db]; }; + ribosomaldatabaseproject11_5MgDb = derive2 { name="ribosomaldatabaseproject11.5MgDb"; version="1.00.0"; sha256="04ppa4k8p54bmkq3jm41h0v4lb5hz95cmnakfzmqfml00ir04mxp"; depends=[metagenomeFeatures]; }; ricecdf = derive2 { name="ricecdf"; version="2.18.0"; sha256="07lsw9rklk2rsvbkcj1ci8hg2x68k3qpkx9yw0cmd7rg5fvydgns"; depends=[AnnotationDbi]; }; riceprobe = derive2 { name="riceprobe"; version="2.18.0"; sha256="0w6qvszdmnipn3v2bld46x7my2a9hni0jbxd0y1d6xcrrgs951ra"; depends=[AnnotationDbi]; }; rnu34_db = derive2 { name="rnu34.db"; version="3.2.3"; sha256="0ahridq75rmjyaivmlhn428wg712zv3003cbzzrajm9w6nibbfgk"; depends=[AnnotationDbi org_Rn_eg_db]; }; @@ -878,6 +901,7 @@ in with self; { rwgcod_db = derive2 { name="rwgcod.db"; version="3.4.0"; sha256="1k0fpnv314lx2jf3mm6xfqa3jx353sp42awxqys9byzhg9zyj2j3"; depends=[AnnotationDbi org_Rn_eg_db]; }; saureuscdf = derive2 { name="saureuscdf"; version="2.18.0"; sha256="0vmm3fy10dzzmaq22ah4fb0k3fs1gdbhnsi8mxz7xgp27dcan29j"; depends=[AnnotationDbi]; }; saureusprobe = derive2 { name="saureusprobe"; version="2.18.0"; sha256="0s5ma3hh7ncsi4dq33r3hwffk85x3gvjbm5cslppbsd0r0bjwkia"; depends=[AnnotationDbi]; }; + silva128_1MgDb = derive2 { name="silva128.1MgDb"; version="1.00.0"; sha256="0pwwxxa55d3919rbczg5iskd03ignimk80m52kfi930b1kdg9qc2"; depends=[metagenomeFeatures]; }; soybeancdf = derive2 { name="soybeancdf"; version="2.18.0"; sha256="1dlwxdslm827661z6f4z2hwr7wpwqfzvizhvv63p86ll7l6gs3s8"; depends=[AnnotationDbi]; }; soybeanprobe = derive2 { name="soybeanprobe"; version="2.18.0"; sha256="06dpwqad7q3wyq0bsgpwkw8kx1gq5fy1s1lw632xrvgcid2fsmf8"; depends=[AnnotationDbi]; }; sugarcanecdf = derive2 { name="sugarcanecdf"; version="2.18.0"; sha256="0wghc6wr7iwkql63m3wibjjdcdpqd53z0g5rxdh553sjb0ca2n7z"; depends=[AnnotationDbi]; }; @@ -898,8 +922,8 @@ in with self; { vitisviniferaprobe = derive2 { name="vitisviniferaprobe"; version="2.18.0"; sha256="1ggz1s37dwvrkhj4vx2civyhap7bgqsshy33lk14z4fjsayfi39a"; depends=[AnnotationDbi]; }; wheatcdf = derive2 { name="wheatcdf"; version="2.18.0"; sha256="1gmbrdilqvm54h6nkb1cm01ki8aipiywd4qj8gpwlm2hqrimr8kr"; depends=[AnnotationDbi]; }; wheatprobe = derive2 { name="wheatprobe"; version="2.18.0"; sha256="1fifi3pvzdrg356idwz0kx7qlf5mssdxlyvwpn3cjgw0z7n7cnw8"; depends=[AnnotationDbi]; }; - worm_db0 = derive2 { name="worm.db0"; version="3.6.0"; sha256="0k99b64gkzmvmrypd5r96k0y2i4ph0kr70kkfnhmmxgwgd8wg0db"; depends=[AnnotationDbi]; }; - xenopus_db0 = derive2 { name="xenopus.db0"; version="3.6.0"; sha256="1jgdidzpka00w21358rj2lrz1chh518iyqlrj3c5rsamrisdyj2c"; depends=[AnnotationDbi]; }; + worm_db0 = derive2 { name="worm.db0"; version="3.7.1"; sha256="0p5rzmkars7kl4y4mlq6jbmgp1mdfw3jcnvhl50dnpqc7h28y4xf"; depends=[AnnotationDbi]; }; + xenopus_db0 = derive2 { name="xenopus.db0"; version="3.7.1"; sha256="067vs7b2slmragqqnfpgy6m187cz1rx9r5agizrjycndzdzkpy3k"; depends=[AnnotationDbi]; }; xenopuslaeviscdf = derive2 { name="xenopuslaeviscdf"; version="2.18.0"; sha256="1bcz1hr7gxw6ac4qvw0giph6hfcf5i9b11s274ypq512qc1d32iq"; depends=[AnnotationDbi]; }; xenopuslaevisprobe = derive2 { name="xenopuslaevisprobe"; version="2.18.0"; sha256="0prb14zn2gvgxq8w0y21x1ng51cn3bgjhkppf7zkmnq1xkzvq0pw"; depends=[AnnotationDbi]; }; xlaevis_db = derive2 { name="xlaevis.db"; version="3.2.3"; sha256="0cdi71c8pflb8n4yfxc0wmfi51w6z0dlz7nw5hv0hkx547v79d53"; depends=[AnnotationDbi org_Xl_eg_db]; }; @@ -911,7 +935,7 @@ in with self; { ye6100subbcdf = derive2 { name="ye6100subbcdf"; version="2.18.0"; sha256="1169hv56981b915rlr5w5sn6ppyjd8as7f4k1hbjzadrdrl3glwp"; depends=[AnnotationDbi]; }; ye6100subccdf = derive2 { name="ye6100subccdf"; version="2.18.0"; sha256="0mhr4zd33gfvvivc17k7fb6nvmhq6h3q0xbx2zl09zd6qk09kizm"; depends=[AnnotationDbi]; }; ye6100subdcdf = derive2 { name="ye6100subdcdf"; version="2.18.0"; sha256="11b1fflgc34lrj4yf1p7way5n83cm9c7znsbxpzlwddwyy8qib30"; depends=[AnnotationDbi]; }; - yeast_db0 = derive2 { name="yeast.db0"; version="3.6.0"; sha256="0xv4v1ybcgz5ha7g98zkfmi6mw0ywrdfspzb39rj13np9bwrqfcp"; depends=[AnnotationDbi]; }; + yeast_db0 = derive2 { name="yeast.db0"; version="3.7.1"; sha256="1shjbflvlxipiyapwd6jpqs9mp8nyr3j63wcpnaznmxv0z5k0fw8"; depends=[AnnotationDbi]; }; yeast2_db = derive2 { name="yeast2.db"; version="3.2.3"; sha256="1xns0129ifklipbardybkjyxfwnlklavq0k6s15wk2iwk7vxa33s"; depends=[AnnotationDbi org_Sc_sgd_db]; }; yeast2cdf = derive2 { name="yeast2cdf"; version="2.18.0"; sha256="0c68val9x8bfnv4xx0vag9dxwsx5q8dzbj0dpha3nshh12jw48w9"; depends=[AnnotationDbi]; }; yeast2probe = derive2 { name="yeast2probe"; version="2.18.0"; sha256="125nif693qcmxc0nnnz917f9avggcdr8g9rfvx2qdc54a2l7vdb7"; depends=[AnnotationDbi]; }; @@ -920,7 +944,7 @@ in with self; { ygs98frmavecs = derive2 { name="ygs98frmavecs"; version="1.3.0"; sha256="1xrm1209xnknwvad7nvg1a0mbxz15z12yd4x5bia3cq03zcmzf9m"; depends=[]; }; ygs98probe = derive2 { name="ygs98probe"; version="2.18.0"; sha256="0awf6z4j2vb2jk9a9j2r512yd3m31660y68pasa9mp488m270a3q"; depends=[AnnotationDbi]; }; zebrafish_db = derive2 { name="zebrafish.db"; version="3.2.3"; sha256="1n6p04hlm5c32fnficx294s7n7izy5460avagw8hx1g5xryhdzqk"; depends=[AnnotationDbi org_Dr_eg_db]; }; - zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.6.0"; sha256="1c7m109yrpvzhj330n8rj1ppvwxr96nlhhwc48rj687qd1fnbj48"; depends=[AnnotationDbi]; }; + zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.7.1"; sha256="1x9s6sxxgijjnrvg4fggnqhv10zwsfw6hy1qa93rjmpgqpr7ad20"; depends=[AnnotationDbi]; }; zebrafishcdf = derive2 { name="zebrafishcdf"; version="2.18.0"; sha256="0sq1xqhblbilvaiabhqyl9gxdj3jg576vgq8v0cls1zvvx0isrx0"; depends=[AnnotationDbi]; }; zebrafishprobe = derive2 { name="zebrafishprobe"; version="2.18.0"; sha256="1pb8z2rdhq11hq391xyi236scyafbp56kbhhwsnha36yygz5drw0"; depends=[AnnotationDbi]; }; } diff --git a/pkgs/development/r-modules/bioc-experiment-packages.nix b/pkgs/development/r-modules/bioc-experiment-packages.nix index fbf8b26f0ea1..04f4d25def24 100644 --- a/pkgs/development/r-modules/bioc-experiment-packages.nix +++ b/pkgs/development/r-modules/bioc-experiment-packages.nix @@ -19,31 +19,36 @@ in with self; { AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.21.0"; sha256="1k1qzxakbavm10bd0ybs1gk97w1y825iqvwimn0cr128qw2xxkyj"; depends=[affy]; }; AneuFinderData = derive2 { name="AneuFinderData"; version="1.9.0"; sha256="0m3pvsdd2y1947zl582791bsip95j41fc6g9gbin3cg51y7lb6xr"; depends=[]; }; AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.11.0"; sha256="08r5430gqsmkbh4n49ac2fl0m24zmqjnc9yxppw5mr0d4n5l26y5"; depends=[]; }; - BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.19.0"; sha256="177zapqbf8ipavs1sp1gby99dbbzsyzgxyjhr258r7849b388k1v"; depends=[beadarray GEOquery limma]; }; - BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.1.1"; sha256="1x1cdq226gr69wlnl543ynvwrxd7fr7znvvh6x1ka8iw357sfglf"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; }; + AssessORFData = derive2 { name="AssessORFData"; version="0.99.2"; sha256="0yi2vxzg21nkqlywcpv6n2vzksl77cvkc42ii9p7gy9kpv56553k"; depends=[DECIPHER]; }; + BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.19.1"; sha256="08c7aqnh4wnhnalrvchcyhy5vmxq5xkq26pmp9xjn2x4zwf4156y"; depends=[beadarray GEOquery limma]; }; + BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.1.4"; sha256="1hh1l134cmbcmyc40fwfrwrbx6qyiv9a3bz8hp9vbdf1vslhcnpk"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; }; CCl4 = derive2 { name="CCl4"; version="1.19.0"; sha256="1j4q7mm4lwi3rcf0y6zj36xc6n7c8y6l8iv9ac4avbgvr1rvlxaq"; depends=[Biobase limma]; }; CLL = derive2 { name="CLL"; version="1.21.0"; sha256="103lmn87zw73sx30ln6g4382ydpi97b1zsm7www8bwlnw6zx7k7g"; depends=[affy Biobase]; }; - CLLmethylation = derive2 { name="CLLmethylation"; version="1.1.0"; sha256="1rwnc84plgkzlz78gawjhjf4lf6gbdzgdhjp6ap49bqzgpp3c10a"; depends=[ExperimentHub SummarizedExperiment]; }; + CLLmethylation = derive2 { name="CLLmethylation"; version="1.1.1"; sha256="1vbvxb3bnwx4ngxkk6vrhshcfyrv0fvs3vhlqk0j9q1mhxg8p3a9"; depends=[ExperimentHub SummarizedExperiment]; }; COHCAPanno = derive2 { name="COHCAPanno"; version="1.17.0"; sha256="199xz5qwp06kr3smr25vx2w25hmzf7qbpaw18aj7bvccsdsyvky9"; depends=[]; }; CONFESSdata = derive2 { name="CONFESSdata"; version="1.9.0"; sha256="091ydgxqldrcr3b73pqyk6555yyclnnr4yizi0kknqasx33sb802"; depends=[]; }; COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.17.0"; sha256="1pgfqrp6cx94marm96swqq8c9nr00xdmlf62hvmacqwspsajbnya"; depends=[]; }; COSMIC_67 = derive2 { name="COSMIC.67"; version="1.17.0"; sha256="0qd0xbc8hy25hyy8bilim2w5inhwz88rypbqc8vjlg54r2yl12nh"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; }; - CRCL18 = derive2 { name="CRCL18"; version="0.115.0"; sha256="0y2v5fmlfj7hzkvw1l116vnczjnmhxd77gvdqjjynl9cgvlx0smq"; depends=[Biobase]; }; + CRCL18 = derive2 { name="CRCL18"; version="1.1.0"; sha256="1hxh7fldfy2v9sii5clwi9i568dcc742nd4da0048p4pm87qxcsv"; depends=[Biobase]; }; CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.13.0"; sha256="1rjp3ybc0yx8sjqp4ahadgymlld2l2hn3dxxvpng06qpp5jch0zq"; depends=[Cardinal]; }; CellMapperData = derive2 { name="CellMapperData"; version="1.7.0"; sha256="0zjssdm2z7i6bcp781x9lz09dmh5krvvxg5a0la79dj5vvs72cjp"; depends=[CellMapper ExperimentHub]; }; - ChIC_data = derive2 { name="ChIC.data"; version="1.1.0"; sha256="07gyyv7bjfxa978c40lkh65m0x2zi855mapvwgpazqgq5qhxyfya"; depends=[caret]; }; + ChAMPdata = derive2 { name="ChAMPdata"; version="2.13.0"; sha256="1xa5lcxf7npb8mykqpx84vpjavl9xzwl24nlsaaw3gk75cfrhpkx"; depends=[BiocGenerics GenomicRanges]; }; + ChIC_data = derive2 { name="ChIC.data"; version="1.1.4"; sha256="0s8nm65kwk2cbs8g66zc46q31nd66fdm0kk0d6gxl6zhv0p3d8dv"; depends=[caret]; }; + ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.19.0"; sha256="1f32hzqgpiclby25223ksp63xlhdk7d52sf2xc97hpjig0571630"; depends=[bigmemory]; }; ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.5.0"; sha256="0y2s4hw7hbfspy1hjsqkaw72pm26k911699k6sw4jhvjh7mkvjbf"; depends=[]; }; ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.19.0"; sha256="1i2aj1vxak6b53mpcd36q2xwgpddllqpqz3wii7rrsa9mg2gaaza"; depends=[affy hexbin limma qvalue statmod]; }; ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.17.0"; sha256="1zz0vq192jfnp494mp61xmkxyd94bbh9xs268jd7ynnlpjp9phsx"; depends=[]; }; - CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.13.0"; sha256="131yanjrw3zsp3ly9i3s2fla7v97wdrrcajsqw38fi8nrln24qbf"; depends=[]; }; - DAPARdata = derive2 { name="DAPARdata"; version="1.11.0"; sha256="0hf2ijncpsjyyvdwnpfb8agsz3w6ph8ga844cdf5q18l51iyprb4"; depends=[knitr MSnbase]; }; + CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="0.99.14"; sha256="1lvdacdazpp071grc75gjxmhwjzkm22lhwzjvf6baclq9qfjgqp2"; depends=[ExperimentHub Rdpack]; }; + CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.13.1"; sha256="014jissvpkj2d0sz3r1dr5c5qs29hbvs9jvm8bl86mld8ff3nlkc"; depends=[]; }; + DAPARdata = derive2 { name="DAPARdata"; version="1.11.4"; sha256="06qwja8qkbix6ial81yv1q3bxrdmqrgridina094p1xrxbfrn5sb"; depends=[knitr MSnbase]; }; DLBCL = derive2 { name="DLBCL"; version="1.21.0"; sha256="0advvjkd6skynjjnz4s9mdnh0l9l2zhn4n9x0kg23dmsg4r8vqm7"; depends=[Biobase]; }; DMRcatedata = derive2 { name="DMRcatedata"; version="1.17.0"; sha256="1a669jjvkjjklbh2kxrv3y2clfps067w6w19y1yr2a8wc7crbl4a"; depends=[GenomicRanges]; }; DREAM4 = derive2 { name="DREAM4"; version="1.17.0"; sha256="0s3y3wgg487p5fswbin4237mrm9kzbq12a84jiixhql1j2ysbhcs"; depends=[SummarizedExperiment]; }; - DeSousa2013 = derive2 { name="DeSousa2013"; version="1.17.0"; sha256="0ahldh3d6phm20ljnyx0hz7q0zk8r3i7i39wy1arqz0rqgmgzfql"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; - DmelSGI = derive2 { name="DmelSGI"; version="1.13.0"; sha256="1drs5gp2vh7m61wj6ypa9bpyn8igmzsql0ddyzpgp8sa99w0w7kd"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; - DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.19.0"; sha256="04gphwyic256x2wzapr9kqzq1z10yl9a2s64m4dn3bwy4613b6rv"; depends=[EBImage]; }; + DeSousa2013 = derive2 { name="DeSousa2013"; version="1.17.2"; sha256="1xz1l83my34kwr4wk6vq3q5yzd3i0ky5qm44wx65f4d92hn7k3v5"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; }; + DmelSGI = derive2 { name="DmelSGI"; version="1.13.1"; sha256="0v25rb5myhki1vvmmzyhpa8n0vv623zj6lh26a10iq4i5bvda9c5"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; }; + DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.19.1"; sha256="1sbhq0m67v5swyafrn74cjz4h3r6d1qmn2skkz3xwjgm70qpbjrb"; depends=[EBImage]; }; DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.17.0"; sha256="05xykgmiakw6n8f1b86wbyjzs9v6b7qz8119pwvbfjgncgwqmcx9"; depends=[]; }; + DuoClustering2018 = derive2 { name="DuoClustering2018"; version="0.99.2"; sha256="0f4ps36wd1yll9w4zkx6n4kz0svqfajmb11a5c51b55572siq203"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; }; DvDdata = derive2 { name="DvDdata"; version="1.17.0"; sha256="0x5crrym68rw2r9nmb33j1n1f5rxpj5rzn8b5j403ikxywfwxblh"; depends=[]; }; EGSEAdata = derive2 { name="EGSEAdata"; version="1.9.0"; sha256="1bmxm535h9ilnpbm196rf40543kh1yf5ldqxilhiyx5k0qaaihmz"; depends=[]; }; ELMER_data = derive2 { name="ELMER.data"; version="2.5.5"; sha256="192jdmxl17m8s1r95c2lizh2r5zpazvx0az8xj22dva0mrazql9c"; depends=[GenomicRanges]; }; @@ -53,30 +58,32 @@ in with self; { Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.17.0"; sha256="05kvsbr46yjpkdnn7rwxhj3wnlrgz92fgg35b8i781131vpy4lzh"; depends=[Biobase gplots limma VennDiagram]; }; Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.17.0"; sha256="1rfsb49fcn127nzykwndzp7gapd36j3r01dvvhn87w6ryy9yc98c"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; }; FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.19.0"; sha256="0ngh5zwikm83rzv9aykhxijf7nj345nnak2207jn4frdq8qahh3l"; depends=[minfi]; }; - FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="0.99.36"; sha256="1yyrcg1zzq9mv6zx9an4bpszh7r9vacwrbcpdza5ihi8w4pcfw9y"; depends=[ExperimentHub genefilter IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi nlme quadprog S4Vectors SummarizedExperiment]; }; + FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="0.99.37"; sha256="1kfh6x69r3vc7v3in1q1n8frbsha5z8gmds7dcgy39wvry16c6lm"; depends=[ExperimentHub genefilter IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi nlme quadprog S4Vectors SummarizedExperiment]; }; FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.9.0"; sha256="1ib9g4zy3zwk7m6hl9ggi030qwrjch9jnip6d7a4b27cjzlf0sdq"; depends=[minfi]; }; FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.7.0"; sha256="04i701nl8w8sdc85z1y8gzg076n3znnd9fkp35a7pq7sczkfih90"; depends=[minfi]; }; FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.17.0"; sha256="1d9xq8ha0p1injk8l16vggfkzk7xlsgaqb227gvl6xc49q8dmh5m"; depends=[minfi]; }; FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.17.0"; sha256="1vp55zd2ifamxm248jskvf2y29cgjyx98jw41h2pbly31qxq4h49"; depends=[IRanges rtracklayer]; }; GGdata = derive2 { name="GGdata"; version="1.19.0"; sha256="0mr6l11bgg8ncga9ivwdps6jp6zbcjs5jxvcpf834qaj92h63mrg"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; }; - GSBenchMark = derive2 { name="GSBenchMark"; version="0.115.0"; sha256="1kpkn05a0r6wf1cv1q9gprgzgjaj8b2ig3apkaydjilcjykbr3vg"; depends=[]; }; + GIGSEAdata = derive2 { name="GIGSEAdata"; version="0.99.11"; sha256="1rn6dmji5ja1p83gai18bcmdc9vi0fm4pq4yk7wdsbv6p334cqlq"; depends=[]; }; + GSBenchMark = derive2 { name="GSBenchMark"; version="1.1.0"; sha256="1a9hlgcz9m36gzkmxkq4i308hsm617hmsxmwq09yd5cxq8dl80g4"; depends=[]; }; GSE62944 = derive2 { name="GSE62944"; version="1.9.0"; sha256="1s28rkr5nm91vnl6cx0gifib4nw70gs8bhmv003f9kbpiq420i8k"; depends=[Biobase GEOquery]; }; GSVAdata = derive2 { name="GSVAdata"; version="1.17.0"; sha256="1gjc9psmx0i25bwki6l74d8jg3mrvfzjdnxs5bhbqnzab6fzdfh0"; depends=[Biobase GSEABase hgu95a_db]; }; GWASdata = derive2 { name="GWASdata"; version="1.19.0"; sha256="0i09njrq0fzwvzj6lqsa7kdnwi35lm7z0akywh0mr87i6dlqj8sq"; depends=[GWASTools]; }; GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.9.0"; sha256="1h6ghr75h1i87lbarsganiw6mgjyiha4zv4hbjdjljc464s11b0d"; depends=[]; }; - HDCytoData = derive2 { name="HDCytoData"; version="1.1.0"; sha256="1nlalaccb5y6vsl5k63qz2mcjr6k6syciv95l18962acgnlqbpq1"; depends=[ExperimentHub flowCore SummarizedExperiment]; }; + HD2013SGI = derive2 { name="HD2013SGI"; version="1.21.1"; sha256="1m3q08m21vim5j520wgiwszrp6nnkrsfqf6wac8cyzw1qs3cp1s6"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; }; + HDCytoData = derive2 { name="HDCytoData"; version="1.1.2"; sha256="1ay7r0aya0b6rxwscg3lwzlgl9iaj9ykii52lmzpxx40yc6szpnv"; depends=[ExperimentHub flowCore SummarizedExperiment]; }; HEEBOdata = derive2 { name="HEEBOdata"; version="1.19.0"; sha256="1z8qb5xrzadg6fxg8cx04dpad3qiab5m8vhgdqw4xs8xdaqd4g1m"; depends=[]; }; HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.21.0"; sha256="0pgb0r6zp6v0wq16c5zjxzjjwb6cjjp3cn8jnh4p91rwf43za4rh"; depends=[]; }; - HMP16SData = derive2 { name="HMP16SData"; version="1.1.0"; sha256="1a5plpx6fcdn924gpfqnw6ykqrc9m62rdkzwwgwfmzj1pl4585qn"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors SummarizedExperiment tibble]; }; - HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="0.115.0"; sha256="0v5ks29280bybzhi5sfsrbrdajh8a29jkrr2c44ld2qchs9qhgmm"; depends=[]; }; + HMP16SData = derive2 { name="HMP16SData"; version="1.1.4"; sha256="0qjqf7ipczv3rs4r4l5ynagi46ksb98b8mylgvbclrqp7ny2wcbq"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors SummarizedExperiment tibble]; }; + HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.1.0"; sha256="0fl3r3sdnnn3s9h5sn0bmgpi0hj965cwgca51qkwcvll4rjamyq2"; depends=[]; }; HarmanData = derive2 { name="HarmanData"; version="1.9.0"; sha256="1c6avjny0fasj99q0a2dm8p3h68jalcglx51b90fnyjgvqgx3h2g"; depends=[]; }; HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.3.0"; sha256="07fvdf6kzipa42r5dmmld7p2chbi074d248da0xmlm8lm1i0wkc9"; depends=[ExperimentHub]; }; HelloRangesData = derive2 { name="HelloRangesData"; version="1.7.0"; sha256="05yr2mklxwfij6yzmhpk83mlrq7zfcn8finf2m4lrvdbdzl1bkki"; depends=[]; }; - HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="0.115.0"; sha256="1498q13fd190cnn6rh1m796zpalfwxfw275r33k8dnjfqiw5c4mc"; depends=[]; }; + HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.1.0"; sha256="0nmd7iqa6cg74xvz1a2x9ahyzs3kwd4fnhz5nkh62sgndj1pv62l"; depends=[]; }; HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.17.0"; sha256="0hjhlq7vx71lwv37vidwlb819hm617dx7g39hgf20ggccmp310rh"; depends=[]; }; Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.17.0"; sha256="17mnwnpsam62mc8bqdwjfh9fiayasbkx1gd3bbp0k82w3az9yzbf"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; }; HumanAffyData = derive2 { name="HumanAffyData"; version="1.7.0"; sha256="02hp2a7h0ivzdfql3vsrvxrn4answlr7hrhw5azdjw8jh895dd1j"; depends=[Biobase ExperimentHub]; }; - IHWpaper = derive2 { name="IHWpaper"; version="1.9.2"; sha256="1ah85aim6mfjiv08pxr11d9x84ymki2kvnncx1iidkqd81h97ifk"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; + IHWpaper = derive2 { name="IHWpaper"; version="1.9.6"; sha256="19fg4ca9hhlh4as0nyd3qkkgqphghgvlcs57279pl42nphzz1hw0"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; }; ITALICSData = derive2 { name="ITALICSData"; version="2.19.0"; sha256="0i09g3dj3rz0yr4n35g9fhc5df957i928vbinsx2bl3jsj7xrf6f"; depends=[]; }; Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.17.0"; sha256="1y219yqipskv3mzf7g75rmzwsp5sq2r9cqacbpyc2gk28z6dfnix"; depends=[]; }; IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.19.0"; sha256="0b6zhvkhpjhz9wr3cfcvyy16l1kvd6aq9p58y78ql9rgpbhz7dcz"; depends=[]; }; @@ -84,7 +91,7 @@ in with self; { JASPAR2014 = derive2 { name="JASPAR2014"; version="1.17.0"; sha256="13hrxj4q2r9bdzwnl0qm5ap92051483876rwq73bz6hy5xg73abx"; depends=[Biostrings]; }; JASPAR2016 = derive2 { name="JASPAR2016"; version="1.9.0"; sha256="1gx14sjv9v5705h1763p5js37jrvvlkiqdm7nrawjs4n6y4cpsdf"; depends=[]; }; JctSeqData = derive2 { name="JctSeqData"; version="1.11.0"; sha256="1zrnmvs1mmg07s5fi8m5yqb975kb1nkx98j0shpk9xi5jdbf7x0d"; depends=[]; }; - KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="0.115.0"; sha256="1y7nnqxaqv9khgy58wq4mflgl0nmk589bcc76chjx7cijq88v09r"; depends=[Biobase BiocGenerics]; }; + KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.1.0"; sha256="1d4qg0svrmfc6v7dhgxbsn0xfhyplizfh113n26z64y97nfhc21p"; depends=[Biobase BiocGenerics]; }; KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.19.0"; sha256="0w2a3yjp5xhbxq0vhzyka8sx17a095ddnpm4jhac65s6zmndgqr3"; depends=[Biobase BiocGenerics]; }; KOdata = derive2 { name="KOdata"; version="1.7.0"; sha256="0grvn2pc38zv133v60hvjh1jx9dsbrwxrz9c6fb977z1rznrkzz8"; depends=[]; }; LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.19.0"; sha256="1i6rl8mziv8apxxa2hlmsg6ramq4aasbg9nxj963lsk9b6gnrzlf"; depends=[IRanges KernSmooth]; }; @@ -101,15 +108,16 @@ in with self; { MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.17.0"; sha256="1bjkdyf0knkdbzdmlas81dhnm5k7yslq6km3yzffrvn1kssml47i"; depends=[]; }; MSBdata = derive2 { name="MSBdata"; version="0.99.1"; sha256="1bgzzrynb4066xps7wagawb2pjd64qab7n9il2znsidfprm03bxj"; depends=[]; }; MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.3.0"; sha256="10i3gg9fbhcj6fz4fz1jzmqmabdf9c39ys8yp40qs60glv9gj3qa"; depends=[]; }; - MUGAExampleData = derive2 { name="MUGAExampleData"; version="0.115.0"; sha256="1ls2rhjx9ksdlz28dw3rm59rh6k17xyilda92ib48p7898njgf1c"; depends=[]; }; - MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.1.0"; sha256="03k4ddgjvrpgg9xikjhy1ayampr8v18ncm57jpnn9wrijvyinpfj"; depends=[AnnotationHub Biobase ExperimentHub impute lattice]; }; - MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.1.0"; sha256="0d7kpm9cqxkwnnickk0hcc2y0x4ah3mh8ajpdrhrylvffbmx4r38"; depends=[AnnotationHub Biobase ExperimentHub impute lattice]; }; - MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.1.0"; sha256="0mpspppz8bmq90aq9jvvqs5700n0dkiqcd5pdrsija8ycp2gbxc9"; depends=[AnnotationHub Biobase ExperimentHub impute lattice]; }; + MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.1.0"; sha256="18y2ljddzk0g7cn5v8cpc151mrdfzhvj0ah4c988lmc6xlqcyjsv"; depends=[]; }; + MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.1.1"; sha256="1lzqv8alxccmfp6s4ylyam9ljwga9p9q5ndnhsljnfiyw820md78"; depends=[AnnotationHub Biobase ExperimentHub impute lattice]; }; + MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.1.1"; sha256="1djqlmms5a24g8n6mimp4fib3h6qd17p1cl9anzmvl3zscz23p8y"; depends=[AnnotationHub Biobase ExperimentHub impute lattice]; }; + MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.1.1"; sha256="17vjfnlxrkmdxifmbpfq81zqzzpdhkm5s1aagcnrhgzkv9prszms"; depends=[AnnotationHub Biobase ExperimentHub impute lattice]; }; MethylAidData = derive2 { name="MethylAidData"; version="1.13.0"; sha256="157qvzvw8hhw25qnzv7xax3vzmq38bw4fp0k34jfwgq944srv0h5"; depends=[MethylAid]; }; - Mulder2012 = derive2 { name="Mulder2012"; version="0.21.0"; sha256="10mciqb0vh32hx1590r99zyr0pbx84hrssdpjz6i8g9hzlp69wvm"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; }; + Mulder2012 = derive2 { name="Mulder2012"; version="0.21.1"; sha256="1ypxdys24g8k98jd50sldqggy28fmjy1cq7gc3pxa10rww6g9h57"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; }; NCIgraphData = derive2 { name="NCIgraphData"; version="1.17.0"; sha256="090s04iwbnhdbgprcy15hl596vmgq8x97v34w2xvmsdld5b8z58d"; depends=[]; }; - NGScopyData = derive2 { name="NGScopyData"; version="0.115.0"; sha256="1l949sqfywpa5rqxh8h6wq5i8cqmf9ly1ghcrb0gmxv2rcazbn87"; depends=[]; }; + NGScopyData = derive2 { name="NGScopyData"; version="1.1.0"; sha256="13dlsznbg3kk7pi0gdzwnh9i3qdk538qh4rnjbpxr6iw61hwl0zd"; depends=[]; }; Neve2006 = derive2 { name="Neve2006"; version="0.19.0"; sha256="0fn77ic133wfdjrnh5vdk95rwx51nigfmznb7i94n8h5hddmpnbc"; depends=[annotate Biobase hgu133a_db]; }; + OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="0.99.11"; sha256="1w38ii5wsaiar4lbn5428pyinzg07zvw4c7fac6a3nx70mhpnxn5"; depends=[MultiAssayExperiment]; }; OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.3.0"; sha256="0ih472qrzx183pyk0k8agwybn5bycx3hx1j2amjkp42p7hml4iqj"; depends=[rJava]; }; PCHiCdata = derive2 { name="PCHiCdata"; version="1.9.0"; sha256="19cmbyhsi84pi89fy623f7r5yld7qifnqfpvwcb3n7ads5idq1qm"; depends=[Chicago]; }; PGPC = derive2 { name="PGPC"; version="1.9.0"; sha256="10z8r98lp92dh14wpf2hs5n3jzw9y3dw6mf5ssx469368hhaypma"; depends=[ChemmineR EBImage geneplotter ggplot2 gplots imageHTS limma plyr RColorBrewer reshape2 SearchTrees splots]; }; @@ -120,7 +128,7 @@ in with self; { PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.9.0"; sha256="1lkqz0kp1jfsi1bvkqhvlqapp658qfm7b1p9kiwk9qakfl0nm7x6"; depends=[]; }; PathNetData = derive2 { name="PathNetData"; version="1.17.0"; sha256="02wdp23y583p9sinhaqkv6lxp836m6kh7na8b2wv6qajanibzhl1"; depends=[]; }; ProData = derive2 { name="ProData"; version="1.19.0"; sha256="0idv9icfzr52k96gij5mlyqyd48mjwka7jg1nhawiaj7g4c005yc"; depends=[Biobase]; }; - PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.7.0"; sha256="1dql2jfvsqn2r1cq1bfg7nfs7gimim6jgsvz7b9pqk1zdh02jhkm"; depends=[CAMERA LOBSTAHS xcms]; }; + PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.7.1"; sha256="1ypwwrk643shfng4nqs7jpy25058ni2fqq4jhx2yc1j73bx8k834"; depends=[CAMERA LOBSTAHS xcms]; }; QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.11.0"; sha256="134mzg2r3bpzcpag5vf2fq8g0xczb5qxyvqqcjzqw654mbafgczr"; depends=[QDNAseq]; }; QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.11.0"; sha256="1j5qzwbc7a9h9hlda6c6f53pm6vqm4kdja4z144j4snyac88xclm"; depends=[QDNAseq]; }; QUBICdata = derive2 { name="QUBICdata"; version="1.9.0"; sha256="1r1wcmd7s17gm5q682siy8ld65w6ylch9jamqjlbp8qiqqvfmzdd"; depends=[]; }; @@ -128,28 +136,30 @@ in with self; { RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.17.0"; sha256="11hrk3cf86jgc7vf14wlyarar2vsnjs0i9wyzvmk76draq9frg30"; depends=[RIPSeeker]; }; RITANdata = derive2 { name="RITANdata"; version="1.5.0"; sha256="0yn8nfvni9h4k9ngzccsqgbjrjvql5gp3haqyg9x334sjsi212c8"; depends=[]; }; RMassBankData = derive2 { name="RMassBankData"; version="1.19.0"; sha256="172x6x7fnzjczi76ibmscbb51l8185lqgiypyyvlisp145mxssdn"; depends=[]; }; - RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.19.0"; sha256="01sf7pbcsibdm5dhh9zv2gg2g58z6vswhdz227qfd6cvbpnpqr7b"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; }; + RNASeqRData = derive2 { name="RNASeqRData"; version="0.99.8"; sha256="0mfgfmbngx87h9ymbqcdabla5rb26p1kh4rvp3g307rp3hraivcp"; depends=[]; }; + RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.19.1"; sha256="1c90s1vjp4w065zldlzrn64qakwnhfg3s6w3ddmx6hynbrc8lk8j"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; }; RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.19.0"; sha256="0z1b986jvinzh3c1yl9q8wa66wgq8hp8rjbs23glxna77znvkp87"; depends=[]; }; - RRBSdata = derive2 { name="RRBSdata"; version="0.115.0"; sha256="0i33fm60lcjczzc4xx6y1gg5jsxlq0v9bz46hym7aq59zlpbqh6p"; depends=[BiSeq]; }; - RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.9.0"; sha256="0an39dgcapfn7i5h1inbjihl224l945g0rax5h33bmpnzlry1a8a"; depends=[RTCGA]; }; - RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.9.0"; sha256="1lh2ij6x796rn39j1awn461jc0snswp14x6z338gqz58dahjfr1x"; depends=[RTCGA]; }; - RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.9.0"; sha256="0micdaglaqfbg2pg9b0jpnvfi91adms8lg7sq7k9srgyjx2dsdid"; depends=[RTCGA]; }; + RRBSdata = derive2 { name="RRBSdata"; version="1.1.0"; sha256="18xm228jlpvv5z5r5k3nyjnnmizsyg5lkml4kdrkw8mv7gljgcyb"; depends=[BiSeq]; }; + RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.9.2"; sha256="19lwjkzs0wrvrgm5a81wq2qcqv2xa1irfnqbv6yrx9c3g3sk6zqi"; depends=[RTCGA]; }; + RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.9.2"; sha256="1ain3wscy6n1jjcb8wajpn9h7flhppih01mjjv6y3dxyyiqqchim"; depends=[RTCGA]; }; + RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.9.2"; sha256="0fisrp4mgl035lcwg4pj1zcrmfafsc0kgc6788h9nx9b1vh6s7w9"; depends=[RTCGA]; }; RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.11.0"; sha256="1y63vnj59sv73zcrnwqd4ikdjx45y9sqb2pj1lnsrhvfbmjazi5z"; depends=[RTCGA]; }; - RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.9.0"; sha256="094yh17af0x4zb97dcmrfxqviylqmr3zii3jya6iwwr2jay5a8wh"; depends=[RTCGA]; }; - RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.9.0"; sha256="0m3i7srvdjjkynnizh7jq8d70rm7cq0wi6182iafdgyaxip2qxgk"; depends=[RTCGA]; }; - RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.9.0"; sha256="1nw57daaf3z5k2m52rw72ncxj68bkjmpq158z59v8zm5cpm8z33f"; depends=[RTCGA]; }; + RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.9.2"; sha256="1bb9b83y3f9012gnr19c2wacj1fkqvbqnymdv3qyc2pn6qhzid93"; depends=[RTCGA]; }; + RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.9.2"; sha256="1a97cdwm7rn9mipw3v904r4j4ay6p26rv3f8lx2znhz5hg44gnaq"; depends=[RTCGA]; }; + RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.9.2"; sha256="1lkywq2nvpil8wi8nv73hfxs3hsi71d85n9if7ra4c6ib3frwiwb"; depends=[RTCGA]; }; RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.11.0"; sha256="1wyiz22rw400hiqqnw41mqpvy8bbj1vxwx3v4vnz6x81drv2sc1n"; depends=[RTCGA]; }; RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.11.0"; sha256="0z2k651pd0m9lxl3n62xf41xhk65n33cgf7d5zfwd03hbc07d0gq"; depends=[RTCGA]; }; - RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="0.115.0"; sha256="0vyy1sarkb64vjq1c3mrd0d04hnfy4aigi7zgvaniv31ab6hpb05"; depends=[Biobase]; }; + RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.1.0"; sha256="002q9rc6d0cr6gip9irlafi67ds4jlvxfnil2if30aw4h6l4apkn"; depends=[Biobase]; }; RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.1.1"; sha256="08p1r5vpz92i7nmgdjsp0i5wzypb46lsdnlykci21nzf9ip12mc9"; depends=[data_table]; }; - RforProteomics = derive2 { name="RforProteomics"; version="1.19.1"; sha256="1dy4d1wyf8ifdhy8psy533yy8liwgb26gbwqv1rdzjxgzai8f3jr"; depends=[AnnotationDbi Biobase BiocInstaller biocViews DT interactiveDisplay MSnbase R_utils rpx shiny]; }; - RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.13.0"; sha256="1p3b97f8kmilpwgf61p4kwkizdn8a07ai9a2x3hy4igzw21fcgz5"; depends=[GenomicRanges]; }; + RegParallel = derive2 { name="RegParallel"; version="0.99.9"; sha256="0n0qyiz2bqw5wi35f8rszrx668dl6hqw054lqakb2dpfpjlzz57y"; depends=[arm data_table doParallel foreach iterators MASS stringr survival]; }; + RforProteomics = derive2 { name="RforProteomics"; version="1.19.4"; sha256="1mm1cfsazajkhaim4grz2zi7ar4x2ljn5vq4rlv20gra3d4b82ca"; depends=[BiocManager biocViews MSnbase R_utils shiny]; }; + RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.13.1"; sha256="1l3za4hbrg38p9sh38qsj17hgg03cbgqga4zg0c4lcipifrpbbfj"; depends=[GenomicRanges]; }; RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.13.0"; sha256="1wyy4m3p40i12hlwvz9ixqps8i4d5703gl0pcgl4i2485d78yv9v"; depends=[GenomicRanges]; }; RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.13.0"; sha256="1kjvy1v0dbdm959cmsf2d5mnrbnisjpff12wl5gn44n2cg7bb65g"; depends=[GenomicRanges]; }; RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.13.0"; sha256="1s1iy8x1x53ny1pyfgwwkiwc3jpjhdkcd9vpwyv2ix5g22jf8ag7"; depends=[GenomicRanges]; }; RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.13.0"; sha256="1pp9y94rdk5wwapc4jbvs35x1z2agv4xvzxy3fl3h7hp22gaqr9p"; depends=[GenomicRanges]; }; RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.13.1"; sha256="1cqannbgpr0s9qr1cx4d23rwjy6k63x25khdr7qx5939chz0r21a"; depends=[edgeR]; }; - SCLCBam = derive2 { name="SCLCBam"; version="1.13.0"; sha256="1ynibzjlyfscg5b1lxa5nvfznp106vb4h7ia6n847h3n5s6ndasv"; depends=[]; }; + SCLCBam = derive2 { name="SCLCBam"; version="1.13.1"; sha256="1b6da5i20w7w08jv3s2xdpp71qf7y1nxyv3qj3fz5jkw2aavds5f"; depends=[]; }; SNAData = derive2 { name="SNAData"; version="1.27.0"; sha256="182pramjd14g1p0aawcjrv51xlyqkp9mhm84v3gnd9gnmkb69b31"; depends=[graph]; }; SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.17.0"; sha256="15l23gw5ckxgr6pscl07jqwb1lz58g5893wnlzz4zpk3sd46d2p6"; depends=[]; }; SNPhoodData = derive2 { name="SNPhoodData"; version="1.11.0"; sha256="1zm0zhf2987hls15b47jv6krn1cc8kp6jm64k4wqhp4dsjxwbaqd"; depends=[]; }; @@ -162,21 +172,23 @@ in with self; { TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.17.0"; sha256="15521vpi6h1ydl8vw43h0plrgy7baj5bprzg8rs50yxgkphh9nns"; depends=[Rsamtools xtable]; }; TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.17.0"; sha256="090y4vyipnlxxg78yxva7q5y81gawfpmkgjrsqiqr1smfalvx9yw"; depends=[]; }; TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.5.0"; sha256="0kbab7fjy7waq5r6k2w0c8x811xd62v39p17acd5gk8gbw9gy919"; depends=[SummarizedExperiment]; }; - TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.1.0"; sha256="0l65f933xxngfm6z5576disj60xasm386x8balsrymcvjkpksr7q"; depends=[]; }; - TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="0.115.0"; sha256="1bmn0r5bx2vc4cpv48mbhr57gpidr42mgaxliwmkyj0dqbjnzmqd"; depends=[Biobase]; }; - TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="0.115.0"; sha256="1n7qq2gc3mcfh4c1y2myrb1pj6bq8l7m7nwhlk0ps90zlj064isp"; depends=[Biobase]; }; - TENxBrainData = derive2 { name="TENxBrainData"; version="1.1.0"; sha256="032z307qh7idxkzqc8b5gngysmw8iy1s3z1r8747n495dy85ippz"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; + TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.1.1"; sha256="0lg2xmf9crcd3328sikjynicrapm32ffq8ay9p0r484rx0m5yvbp"; depends=[]; }; + TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.1.0"; sha256="160gj5q4n08l3llfqd0iim2054v8jd3a2pvvd7454amangnrrjd1"; depends=[Biobase]; }; + TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.1.0"; sha256="1njy5ab0a8p97gi8ci0bad1byl5k42a5shjrss8z9k3a0n9jzpxm"; depends=[Biobase]; }; + TENxBrainData = derive2 { name="TENxBrainData"; version="1.1.2"; sha256="1m4cajmp1h5mahlxbvyfvslqq3yfbcy8k46m5p0b73phvnw44846"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; + TENxPBMCData = derive2 { name="TENxPBMCData"; version="0.99.3"; sha256="00xjm8xr5f1dzghmr6p3mcjcir6a81gd99kgzznj5k90assggr45"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; }; + TabulaMurisData = derive2 { name="TabulaMurisData"; version="0.99.2"; sha256="185y3cxdkgj4gl4ai0nc0684nz357qscfsah559wdvvvqny25dmk"; depends=[ExperimentHub]; }; TargetScoreData = derive2 { name="TargetScoreData"; version="1.17.0"; sha256="12bmw3qmkw9blmr5ikgx0qyfv1x6hda8d41fiy8gsb74fa4nifsv"; depends=[]; }; - TargetSearchData = derive2 { name="TargetSearchData"; version="1.19.0"; sha256="024av13qimrl55dwkw46rfx9gr6kdghnf1n5qcr4q7h5i9frdfxg"; depends=[]; }; + TargetSearchData = derive2 { name="TargetSearchData"; version="1.19.1"; sha256="1hwfqsz1rivqq14x5z9d8nphxajfxhm70mgbi0pjzlzsravg487w"; depends=[]; }; TimerQuant = derive2 { name="TimerQuant"; version="1.11.0"; sha256="1a49jaxgjhwl756a7wijswa90z03fz61ffp6w5h00v9qfzgnyf79"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; }; VariantToolsData = derive2 { name="VariantToolsData"; version="1.5.0"; sha256="1kkz3zvba4mc237pxwj6z0c2jvbrgfaz3n5vm55bz6j47aas3i4j"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; }; WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.13.0"; sha256="0f3llqwkc5d4av47871d45lfqghmncww9g5rgf58pydrnw7n93xv"; depends=[]; }; XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.19.0"; sha256="1kac43fvng1pwa8hlbivd8pxan7agp9csp0nmh062x4kwamny3hm"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; }; affycompData = derive2 { name="affycompData"; version="1.19.0"; sha256="14ss2b854dj36rzhx1z854r5hkxy0yqzlm5k0690gn5bwlah6rk6"; depends=[affycomp Biobase]; }; affydata = derive2 { name="affydata"; version="1.29.0"; sha256="0sv5q59xfvlyk97ihki5sqdzy9nldjccxiscx3ii1xpp4xk44i3c"; depends=[affy]; }; - airway = derive2 { name="airway"; version="0.115.0"; sha256="1h823q96za4jrzf680bp651blh5giqwx660nhp7xhl3drxpzf1ir"; depends=[SummarizedExperiment]; }; - allenpvc = derive2 { name="allenpvc"; version="0.99.1"; sha256="1g0bk3v2gmhr2ck4kdc2pb6xj8abk9kgk0h5f0hdfbaxjdrhwpx3"; depends=[AnnotationHub ExperimentHub SingleCellExperiment]; }; - alpineData = derive2 { name="alpineData"; version="1.7.0"; sha256="18llr6pssxmrvw3qzxw4f77bpv8g3akz3kbsn9xsdsij364q33am"; depends=[AnnotationHub ExperimentHub]; }; + airway = derive2 { name="airway"; version="1.1.0"; sha256="0daywdjalqbqx6gxrg4fwiasa62h9jh8ibg9kh0vrd35mdazh7b4"; depends=[SummarizedExperiment]; }; + allenpvc = derive2 { name="allenpvc"; version="0.99.2"; sha256="04f6y2zk7c8prk22yl15qp9xf81dickn2ida8b5jdhzby6a4p1d1"; depends=[AnnotationHub ExperimentHub SingleCellExperiment]; }; + alpineData = derive2 { name="alpineData"; version="1.7.1"; sha256="1gdj474nc2s92i2m1f02ganr5vsv93315mk3dqdyyk05xr9banbw"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; }; antiProfilesData = derive2 { name="antiProfilesData"; version="1.17.0"; sha256="0wyjfc02wm5x5d61fs6cs7g3s0j4aibpqkdiwx0d8cbbkl38ih3f"; depends=[Biobase]; }; aracne_networks = derive2 { name="aracne.networks"; version="1.7.0"; sha256="1acngnqvg7vl402yfcw65rqs27a7sncl1xfz2893abfli2ccpbzx"; depends=[viper]; }; bcellViper = derive2 { name="bcellViper"; version="1.17.0"; sha256="0rzzj4pla57z9825jcs2kx177xrcqfnh7jai41m8dwfxln6ccz25"; depends=[Biobase]; }; @@ -184,7 +196,9 @@ in with self; { beta7 = derive2 { name="beta7"; version="1.19.0"; sha256="1gd1l8rh73k27sm1cjfy9rmsplrkji3zhzrzcldjmaaixl5nfjql"; depends=[marray]; }; biotmleData = derive2 { name="biotmleData"; version="1.5.0"; sha256="0ccx398761qdnnsrjwrrg6qjrq01fv88999f2llyq9gpd3f43lgs"; depends=[]; }; bladderbatch = derive2 { name="bladderbatch"; version="1.19.0"; sha256="0n9vwbj8cii67rhxvb1ps72k99rv251zcdr4w3r1jkbvcd61nvh0"; depends=[Biobase]; }; - blimaTestingData = derive2 { name="blimaTestingData"; version="0.115.0"; sha256="1hzmwjmyi6qnkqnq2x6ml8yvzn1sr33lwc6nhz2k2mx6s2l4ajbb"; depends=[]; }; + blimaTestingData = derive2 { name="blimaTestingData"; version="1.1.0"; sha256="0r51zz7kh16zgadr2vzgrm5fywfs03mk2jk5qywb27agqbw5y40s"; depends=[]; }; + brainImageRdata = derive2 { name="brainImageRdata"; version="0.99.6"; sha256="0wbj8y1qskc23gqdwc815racv7kqplmh1v12y5y094fcgs6cq62p"; depends=[ExperimentHub]; }; + breakpointRdata = derive2 { name="breakpointRdata"; version="0.99.2"; sha256="13mfnd2ms1fnk6zmyz8l10qw8xhfmb8qjyc2r7hn1qmap6ld578f"; depends=[]; }; breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.19.0"; sha256="0pn48n81vx2wq425q5wnga6n32apgajk0bwq78ri983plh7ik2b1"; depends=[]; }; breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.19.0"; sha256="0b6z16m6kqkd8rfrdvjp6p4fbqs78s25fbiswnw0k8jzvz5yw5x7"; depends=[]; }; breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.19.0"; sha256="0slagz3x2q1qykvjcfnh7k3ggpn2g34j4iqvnv7j3mdcc085hn1d"; depends=[]; }; @@ -196,7 +210,9 @@ in with self; { bsseqData = derive2 { name="bsseqData"; version="0.19.1"; sha256="0gqwyx0l0xmd2aa46shq4kr11nfi1imj2pwfjc9026r47af5b84h"; depends=[bsseq]; }; cMap2data = derive2 { name="cMap2data"; version="1.17.0"; sha256="11973w3gjz0qayxacx41mlbf4ji345js8jgjkn2aba0ahnyzb6vw"; depends=[]; }; cancerdata = derive2 { name="cancerdata"; version="1.19.0"; sha256="02zi60lh6jsg6hlyyq6wzg9lzxjr8m9418kywlk3x3c6kkgkrh69"; depends=[Biobase]; }; - ccTutorial = derive2 { name="ccTutorial"; version="1.19.0"; sha256="0xd3zrcia312h947nvah3ksx9kxzhqzc9c2nm5q6ssvx15s6f6d6"; depends=[affy Biobase Ringo topGO]; }; + ccTutorial = derive2 { name="ccTutorial"; version="1.19.3"; sha256="1bghwfpdm2xzh6w1z2pinv9wxy3f5vx8aabyl5vj9smfmplgcmxx"; depends=[affy Biobase Ringo topGO]; }; + ccdata = derive2 { name="ccdata"; version="1.7.0"; sha256="1vdsldxl1xnjdi9ai346a1zx9jp6kw33884vwwy86xmj7799j3y1"; depends=[]; }; + celarefData = derive2 { name="celarefData"; version="0.99.0"; sha256="118rdgkz4vlhk5n5c683sl28xsjqds6m08w3nfsw8z7ki6kng9sx"; depends=[]; }; ceu1kg = derive2 { name="ceu1kg"; version="0.19.0"; sha256="0vs60mflfc1pnc7s725wsyq2jrj44jrvxwzpw4bhlj0qbs602s8l"; depends=[Biobase GGBase GGtools]; }; ceu1kgv = derive2 { name="ceu1kgv"; version="0.23.0"; sha256="10jnbc8y386racq3ac1hf1dp76wvzlfm8p66c94pk3f2m0w45psv"; depends=[Biobase GGBase]; }; ceuhm3 = derive2 { name="ceuhm3"; version="0.19.0"; sha256="1qdp85ps5xrlx1pl769j91aig2rgxcix4pdzrsa249nyyq1avdym"; depends=[Biobase GGBase GGtools]; }; @@ -209,11 +225,11 @@ in with self; { curatedBladderData = derive2 { name="curatedBladderData"; version="1.17.0"; sha256="14xwq55g83pvwyxm7kl6hq9c4j2bd6vp63afir619d5binl6i7ln"; depends=[affy]; }; curatedBreastData = derive2 { name="curatedBreastData"; version="2.9.0"; sha256="024sx3am50vsaaixmj8gfp3f905rf7g7qyn47sdakpv6sx48k1zl"; depends=[Biobase BiocStyle ggplot2 impute XML]; }; curatedCRCData = derive2 { name="curatedCRCData"; version="2.13.0"; sha256="1f6m6sllbxzca27lwyvav2d4si65w7fs9mh4mksw2sn8n8x5452v"; depends=[BiocGenerics nlme]; }; - curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.11.1"; sha256="1gdnp5m8d3lz88hvsm3j2jq9w1di14ifls5l9q51jxm045yg0yjj"; depends=[AnnotationHub Biobase dplyr ExperimentHub magrittr S4Vectors tidyr]; }; + curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.11.5"; sha256="1rcznh6h7vrwicf545jfxabrjwqf1npxqpp6hdfnf5bylkfrc1d9"; depends=[AnnotationHub Biobase dplyr ExperimentHub magrittr S4Vectors tidyr]; }; curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.19.0"; sha256="0yvc1kpy4ql2sd467dggi6kpwxrvvqyasr0mgc61s1snmakvm06y"; depends=[affy BiocGenerics]; }; - curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.3.3"; sha256="0khdg080c5ivirh84w1w6pvl9g4yi8i8f4sl82q3a2nwldqswghz"; depends=[AnnotationHub ExperimentHub MultiAssayExperiment S4Vectors]; }; + curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.3.5"; sha256="01m4kld5cp0ff5wlwk2wln15vyjxgahzbk3xkzlg81yvs67ai2vr"; depends=[AnnotationHub ExperimentHub MultiAssayExperiment S4Vectors]; }; davidTiling = derive2 { name="davidTiling"; version="1.21.0"; sha256="18ivz1z0il8s9sk6c5mzgipsbs8xswbq7swwm422ji1yp75lkd9p"; depends=[Biobase GO_db tilingArray]; }; - derfinderData = derive2 { name="derfinderData"; version="0.115.0"; sha256="1xvvcbsbmrkri2nl7g1wpbbsa7wn49dj85xwxbsf8yffmisxb09k"; depends=[]; }; + derfinderData = derive2 { name="derfinderData"; version="1.99.0"; sha256="1dv6j91c9xs19pynza54gs127qqf5xk66rwin6rby0dcv58ng6s4"; depends=[]; }; diffloopdata = derive2 { name="diffloopdata"; version="1.9.0"; sha256="12a5338djyhg94q7wdahij4c9dnrx5qx04a1g9304wpk5z6cmxni"; depends=[]; }; diggitdata = derive2 { name="diggitdata"; version="1.13.0"; sha256="09b1mk68mg3jqf63c54xdh805vd79hbnnh02rf6qb3pq6w9b6z64"; depends=[Biobase viper]; }; dressCheck = derive2 { name="dressCheck"; version="0.19.0"; sha256="0k3h5i86345xx0d31qim1d1aw25axwy48hiq717fbnz2mpwsggj7"; depends=[Biobase]; }; @@ -224,11 +240,11 @@ in with self; { etec16s = derive2 { name="etec16s"; version="1.9.0"; sha256="0ljn90gf4sm7615xw25dil15kgf81gl0hvbp24snx4nbflnhns4q"; depends=[Biobase metagenomeSeq]; }; faahKO = derive2 { name="faahKO"; version="1.21.0"; sha256="19dxcf3yfgy8h8xn76h7x2ihvgy90923a28j3b2k972r84zzy7gk"; depends=[xcms]; }; fabiaData = derive2 { name="fabiaData"; version="1.19.0"; sha256="104c70pp9cnkx3y2mm6yxj4vj6k2mqrhw1n2cibhxnnqnl2lnwnr"; depends=[Biobase]; }; - facopy_annot = derive2 { name="facopy.annot"; version="0.115.0"; sha256="0aribb9b0rjd2xlxchbsjq3darg6klhsc8ajpa34m0rldkp3nzrl"; depends=[]; }; + facopy_annot = derive2 { name="facopy.annot"; version="1.1.0"; sha256="0snc9v8jy3dnxidk7g9lppxcp35flgdgp132sap8qkh6d1qc2rwd"; depends=[]; }; facsDorit = derive2 { name="facsDorit"; version="1.23.0"; sha256="0xxdz1xfb661pnrqji6vxsmmr90h1v1i195k9gb4dll6hwbq0n11"; depends=[prada]; }; ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.19.0"; sha256="0jjaj492k4akc30yvr4q8y31wdi152iq5s3pl5i10sl9xrbg80hj"; depends=[lumi]; }; fibroEset = derive2 { name="fibroEset"; version="1.23.0"; sha256="1g22av8zj4nq9prnps7zgrzvva9d5a6h016llg0brpf9qjpg58p3"; depends=[Biobase]; }; - fission = derive2 { name="fission"; version="0.115.0"; sha256="1wx3ama4pdklyrjb54ww69ig554iv2c7j568zpxdywclg38z6pms"; depends=[SummarizedExperiment]; }; + fission = derive2 { name="fission"; version="1.1.0"; sha256="04rwbx0dd6fjyg76jw62vimllq40lb432bzmpf051x9gjqfyx0v2"; depends=[SummarizedExperiment]; }; flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.17.0"; sha256="1ahg5g9ypxbhm7jrsbq1hjk5r5fmgvirawfd2xqfiaw5x9pkmrai"; depends=[flowCore]; }; flowPloidyData = derive2 { name="flowPloidyData"; version="1.7.0"; sha256="0f3cnq2s215a6wrz2cbp90219smvhr4zsvl02wbd40xb8902zhdc"; depends=[]; }; flowQBData = derive2 { name="flowQBData"; version="1.7.0"; sha256="1xla98i06j1qi2w88x1v8agvqcljzwxfcxakw0fl6phwl07hz9na"; depends=[]; }; @@ -245,8 +261,8 @@ in with self; { geuvStore2 = derive2 { name="geuvStore2"; version="1.11.0"; sha256="1ggac70x9pblbnzm6wg6rpmbgrkf802b2vgnfah1516grx0dwrkd"; depends=[BatchJobs GenomicRanges gQTLBase]; }; golubEsets = derive2 { name="golubEsets"; version="1.23.0"; sha256="1h45rwz6z4wgibbyafv8946vfs303km7ixcradml4ymbpwibp4ib"; depends=[Biobase]; }; grndata = derive2 { name="grndata"; version="1.13.0"; sha256="1ybgk5nf9nqrmw4mchpf183zyik6szzsm2cxh619fv27f0i3hjzk"; depends=[]; }; - gskb = derive2 { name="gskb"; version="1.13.0"; sha256="0gac903pldny2p1fv3rhxr9v24iznnrz17xhdd8z01rsy0yvxdql"; depends=[]; }; - h5vcData = derive2 { name="h5vcData"; version="1.115.0"; sha256="0viw7na4wqscaj0vijharvdj8mvwm0mxw0b2gm3slb9crkmksra7"; depends=[]; }; + gskb = derive2 { name="gskb"; version="1.13.1"; sha256="1jpl7vm2r28bf70mv2sy0dkdn6yn27w96ja2a0yynbpd509v8fwg"; depends=[]; }; + h5vcData = derive2 { name="h5vcData"; version="2.1.0"; sha256="036bvqd8glpk2armbv42wxv28k6rqg301l7i04wp85d94ipgn6yk"; depends=[]; }; hapmap100khind = derive2 { name="hapmap100khind"; version="1.23.0"; sha256="07r1nsl92awkkw41midkb9iv4c93my7c222li2f4mym8hn4ahn8p"; depends=[]; }; hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.23.0"; sha256="0dvb3b2ls7g66vsv9qzl29kkjmdd6mwrhqxzj0a1d7qnkg48kgy1"; depends=[]; }; hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.23.0"; sha256="0jqyvd1khz84l1qw31xk2szb9ycsp76yrs1h81ahg64sslygnfg0"; depends=[]; }; @@ -256,12 +272,12 @@ in with self; { harbChIP = derive2 { name="harbChIP"; version="1.19.0"; sha256="1566kxfblk6z4dia4f3gl3v0dsz8lx343nlflbp2wfb6gd314dl6"; depends=[Biobase Biostrings IRanges]; }; healthyFlowData = derive2 { name="healthyFlowData"; version="1.19.0"; sha256="052kvg8gvfbqc4fpr8np1q9li7f52daq1rndpg7zmc5zn4nqjzrn"; depends=[flowCore]; }; hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.19.0"; sha256="1c113f0aj51mdvdizi6m2wmm0v7zxsa3pkp3bjq2426v449qr3ls"; depends=[]; }; - hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.1.0"; sha256="05y00zzwflkkqblf811k5pxdcc9ivmvv9znlvsa232dkk4f1fnvy"; depends=[Biobase]; }; + hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.1.1"; sha256="1h1n76j6l0nqqf18a5w5c8vmjd579jdh2ix84j70s30nkzbyxhyw"; depends=[Biobase]; }; hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.19.0"; sha256="005llh7vpfc01qbq1wnq1nribqgh1kj7mw0rz59dsmr92czm7lbi"; depends=[]; }; hgu2beta7 = derive2 { name="hgu2beta7"; version="1.21.0"; sha256="1d80nxbf8ffmh7ipvxw2smvhgq4xvjhnhmwpwmkwn30yghrm46wj"; depends=[]; }; hmyriB36 = derive2 { name="hmyriB36"; version="1.17.0"; sha256="1s1gsysv8wsk9fzd34fjw2rp6jk8nysg1wd6dhay5mqphv92abkh"; depends=[Biobase GGBase]; }; humanStemCell = derive2 { name="humanStemCell"; version="0.21.0"; sha256="02y71ydwlygn6yickjx3gjsmrhp6dnvqk5319is70gwd214466r1"; depends=[Biobase hgu133plus2_db]; }; - iontreeData = derive2 { name="iontreeData"; version="1.17.1"; sha256="171gx10sfmpvwlv8ww5ckgc71y10lips3ws6v566amsdysafy82y"; depends=[]; }; + iontreeData = derive2 { name="iontreeData"; version="1.17.2"; sha256="1y3jawc5rs1fhv90yygkjghp1ir4zw540hi2ncml4lm003d42ghq"; depends=[]; }; kidpack = derive2 { name="kidpack"; version="1.23.0"; sha256="1ib24nbvqgids10k1glvpswavnv0qd14nvx9bw13bk09vndagkyi"; depends=[Biobase]; }; leeBamViews = derive2 { name="leeBamViews"; version="1.17.0"; sha256="1mldlpdpnivfi60rnsbz7466jf9ssyfgb2xv9ipwc8nlmszd6g45"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges Rsamtools]; }; leukemiasEset = derive2 { name="leukemiasEset"; version="1.17.0"; sha256="15c31vzfn83pfjj8bmvg4sl0hynlvaz2wcg3fzlxmlpbf6b5rqd7"; depends=[Biobase]; }; @@ -270,8 +286,9 @@ in with self; { lydata = derive2 { name="lydata"; version="1.7.0"; sha256="0lq17l0klsn081m2nd9hrx50nxksvf7186drby66qvq6bhw3vhms"; depends=[]; }; mAPKLData = derive2 { name="mAPKLData"; version="1.13.0"; sha256="1h4x00a7rziqm3cqkddpp7ahrb36045yq71lskdjyp43k066jplw"; depends=[]; }; mCSEAdata = derive2 { name="mCSEAdata"; version="1.1.0"; sha256="0rcfyk6mwlxgkk7q40djbcbd4kx4vyy79h6dxb37zd7mpzxj03nx"; depends=[]; }; - mammaPrintData = derive2 { name="mammaPrintData"; version="1.17.0"; sha256="0gfhiz8wqdxx56an3yp5jagsr7bx131lia86yycvhyaylsj0pv7i"; depends=[]; }; + mammaPrintData = derive2 { name="mammaPrintData"; version="1.17.2"; sha256="0015cz3czxzzrx7ba8lqr1a5i4nh1mns114br660y9d32j1nsw0f"; depends=[]; }; maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.25.0"; sha256="14m82492wb7jmqwjllnqak9rivyky1prcqgp1yn0g05c406fj0r9"; depends=[]; }; + mcsurvdata = derive2 { name="mcsurvdata"; version="0.99.4"; sha256="0kv2gq9vr0z2sg8v7mv0ky66gvwf2hbaisw2g02a81bzhjvyjky8"; depends=[AnnotationHub Biobase ExperimentHub]; }; metaMSdata = derive2 { name="metaMSdata"; version="1.17.0"; sha256="0j6h0s75w50jp3lcfs5cilqaqhhinlfn9c6zlpki6906fj1q6dxx"; depends=[]; }; methyvimData = derive2 { name="methyvimData"; version="1.3.0"; sha256="0jacj9jyqs5x11xds6bindab6q96br95r37dxmgxw5gxl9lcn6ql"; depends=[minfi]; }; miRNATarget = derive2 { name="miRNATarget"; version="1.19.0"; sha256="05x4vl8x2brm3bj04kddzcqjnm72jw29prmcwr1ildbaadmzh3fg"; depends=[Biobase]; }; @@ -284,12 +301,12 @@ in with self; { mosaicsExample = derive2 { name="mosaicsExample"; version="1.19.0"; sha256="17xvlaxlw6jn7w81dyg74n84nny6apaxv8b7qbv7gcyil3h2xr7f"; depends=[]; }; mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.19.0"; sha256="1y7vkiqp4mkf16mpl5yl1jzmh1fv67d6k4i8qfi1lm68q2av9ggv"; depends=[]; }; msPurityData = derive2 { name="msPurityData"; version="1.9.0"; sha256="0z7gs75bci301mhhp9j8lxpivjns2bmr51vsz04d4k308j19w1wv"; depends=[]; }; - msd16s = derive2 { name="msd16s"; version="0.115.0"; sha256="1gspbva55x3bz2xzgdm9yfif0rgbd9gz9alswh1cy1kj99b0qk54"; depends=[Biobase metagenomeSeq]; }; + msd16s = derive2 { name="msd16s"; version="1.1.0"; sha256="09zjzad3blq6i1m6fnkfjpllnvjn9vlrlc075gcm2gpwcx4w775a"; depends=[Biobase metagenomeSeq]; }; msdata = derive2 { name="msdata"; version="0.21.0"; sha256="1srm1djnzfrj6klzxm2s721glk75lakb2428arqn3bm8vzvqw5vy"; depends=[]; }; - msqc1 = derive2 { name="msqc1"; version="1.9.0"; sha256="0qdn1n6nisabv1iq8xqv3h14vyjwpc8576gl88km0kfd6pwwyij2"; depends=[lattice]; }; + msqc1 = derive2 { name="msqc1"; version="1.9.1"; sha256="041fz9md3q95p1cwc7bcqam2z555sin2ib7ryssp79hp8iibx50g"; depends=[lattice]; }; mtbls2 = derive2 { name="mtbls2"; version="1.11.0"; sha256="1ismd5yp3vgj1cqp4y92gy5z856bs6sy3fgbigjjba2rrb3m4k1z"; depends=[]; }; mvoutData = derive2 { name="mvoutData"; version="1.17.0"; sha256="13kakn04xrngx9m80m1gqwdx3f75qixy6h9y0jvh16jk49kdnxcd"; depends=[affy Biobase lumi]; }; - pRolocdata = derive2 { name="pRolocdata"; version="1.19.1"; sha256="1bh5qq8q0ar380nbci4y2bij19imgb5b7q5yf71mmlsxbk3284fz"; depends=[Biobase MSnbase]; }; + pRolocdata = derive2 { name="pRolocdata"; version="1.19.5"; sha256="0gci5k1wxmnwy76nhnpjm9hysxpzjz29xw8j8srp96zn1bskaayi"; depends=[Biobase MSnbase]; }; parathyroidSE = derive2 { name="parathyroidSE"; version="1.19.0"; sha256="1dmnm348yxa9p6lnia4iiil1s4jkxj1n83frhml06brnqymbb9wn"; depends=[SummarizedExperiment]; }; pasilla = derive2 { name="pasilla"; version="1.9.0"; sha256="09rzh3w8nki9gqsk3pznk867ipg7s7imz7ma67cl0rh8pz2vg05i"; depends=[]; }; pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.19.0"; sha256="0d2b4qav1m0whr7gwn2h2962qd72i3fc0y9c36k6nxr7jyfmv1jj"; depends=[]; }; @@ -299,7 +316,7 @@ in with self; { pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.17.0"; sha256="1qz6saflpsa9naj536k7ciqks95hb6l1z2v6srclqq7b45465h1b"; depends=[]; }; pcxnData = derive2 { name="pcxnData"; version="2.3.0"; sha256="1whw0wrfq1dfbxpfcz9z749dh27fadxmwp3dln945qh0nrjli6zc"; depends=[]; }; pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.19.0"; sha256="1rfp34332p0fbx9yfb87rlhwwzjy1pm3zf372pvhv1r7qm8w3dyh"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; - pepDat = derive2 { name="pepDat"; version="0.115.0"; sha256="0rzwyq7aj3rf6sghybsn27vimlqv8z78bq5xs5jibjvwy697xczn"; depends=[GenomicRanges]; }; + pepDat = derive2 { name="pepDat"; version="1.1.0"; sha256="0yqlsdzjqwdvjfy7p6rls2xy5bph75pivkvizj575pmagdviv882"; depends=[GenomicRanges]; }; plasFIA = derive2 { name="plasFIA"; version="1.9.0"; sha256="0ivyvrx2wmr9wsi852h3fdkbc8qrxhx1gf21aiazlygz3x796fml"; depends=[proFIA]; }; ppiData = derive2 { name="ppiData"; version="0.19.0"; sha256="0hglfcyzlz7j090qylilqxx9jhivk3ipkq6q0zn2grydrj0g0xib"; depends=[AnnotationDbi graph]; }; prebsdata = derive2 { name="prebsdata"; version="1.17.0"; sha256="1jccx76j7xqbl4660f0akh6bnvhcvpn1wkn2hchbv9w1s9ywy9pi"; depends=[]; }; @@ -310,37 +327,40 @@ in with self; { prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.9.0"; sha256="02vg37vllda3yvw6lq7xggil6l3n7v4y37s2cqixqrrmnczzqb2z"; depends=[Biobase]; }; pumadata = derive2 { name="pumadata"; version="2.17.0"; sha256="0ag7kv1k9jaj943l0szxlk2qfx5mlpspwsrnnyxxcpi3s8r8nyn4"; depends=[affy Biobase oligo puma]; }; qPLEXdata = derive2 { name="qPLEXdata"; version="0.99.1"; sha256="05v19rlbskvy15504ys8x3s2hhbdzwnyz3dwjas6h0b7rs3d51p7"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; }; - rRDPData = derive2 { name="rRDPData"; version="0.115.0"; sha256="1z334hpwrl3f23r7cyr6zr7niwmccmxpwzhydgwlimvkdg8yn2gv"; depends=[rRDP]; }; - rcellminerData = derive2 { name="rcellminerData"; version="2.3.0"; sha256="1qms5v7jpvncdkllcan0xnqxhbxsh3kij4hcin8m4xd470vnf0xs"; depends=[Biobase]; }; + rRDPData = derive2 { name="rRDPData"; version="1.1.0"; sha256="16xk33bry0203sr79lzs89pwzbqds29894fc2hjr9qs624wrzvnk"; depends=[rRDP]; }; + rcellminerData = derive2 { name="rcellminerData"; version="2.3.1"; sha256="1i149vpfm873nzykbxf93rkrmyjshri5xi7awmxf60yiwacbafkk"; depends=[Biobase]; }; restfulSEData = derive2 { name="restfulSEData"; version="1.3.0"; sha256="01vbzdx354qpl58lznn9938jn93rf9nikwjfmy1w33z5cmirc7ad"; depends=[ExperimentHub SummarizedExperiment]; }; rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.19.0"; sha256="1bcn3s36w3asb2di8851wg67dpx3rwalw9php1sklzrbh2f7jazs"; depends=[]; }; sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.5.0"; sha256="06p4cq30diwx5flxc31lw3k6z66y6villf99qq99f4ab5x3gad94"; depends=[SummarizedExperiment]; }; scRNAseq = derive2 { name="scRNAseq"; version="1.7.0"; sha256="15cxr52qakxhsbjnm8vl33qlwbvl3lghkrk4l2v0dih4mw4g65nb"; depends=[SummarizedExperiment]; }; seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.13.0"; sha256="0z9dspkjvjn20q542bjq7xyc7fpy76y3ic01h14cvql42m0vhl53"; depends=[]; }; seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.17.0"; sha256="0hz9vf8fplqm3gfrfiiirm0w6g9x6bjq7l96275aizbx3g6a80kb"; depends=[]; }; - seqc = derive2 { name="seqc"; version="1.15.0"; sha256="0xkc712swyr9w267vsbnyhpjif47mjbgkj52f0y4b2s7vs521h0s"; depends=[]; }; + seqc = derive2 { name="seqc"; version="1.15.2"; sha256="1bc4ibhb7wr08c794m1ljy3hz4fy0vikavg7g7y6l3rjfvlns7lk"; depends=[Biobase]; }; serumStimulation = derive2 { name="serumStimulation"; version="1.17.0"; sha256="153zq6qpk02mkk31v5sl129j50wiw9n8c7n28f39w0mzg93yjyv5"; depends=[]; }; - sesameData = derive2 { name="sesameData"; version="0.99.3"; sha256="0q9j82m0b9vpl7an4kqbbzlpj50qv47fbi7anj7kkxdk8w2ck0l3"; depends=[AnnotationHub curl ExperimentHub]; }; - seventyGeneData = derive2 { name="seventyGeneData"; version="1.17.0"; sha256="00fmvpvp2bi2cv0441bzchir91iz8ip077m350jhp99nzcj6khg3"; depends=[]; }; - shinyMethylData = derive2 { name="shinyMethylData"; version="0.115.0"; sha256="0d1sm0bcfwd7q644jdxp069q4qjbzrg44srm60knxhp1kbf2ll5i"; depends=[]; }; + sesameData = derive2 { name="sesameData"; version="0.99.5"; sha256="0y2xkxrbj5fla75rq4iysa5ckmvv6fnbi06nk372n0gyvi0v5w8d"; depends=[AnnotationHub curl ExperimentHub]; }; + seventyGeneData = derive2 { name="seventyGeneData"; version="1.17.3"; sha256="1aq5pzj70alv4kmi79kdyc9v0441gvfgibzf5j06zh6b2bc409x6"; depends=[]; }; + shinyMethylData = derive2 { name="shinyMethylData"; version="1.1.0"; sha256="1qd8193vvs22x8hfy70ih2m5gx4s46hd0fas9ann198vv4rhygxz"; depends=[]; }; simpIntLists = derive2 { name="simpIntLists"; version="1.17.0"; sha256="1cgr86ibyz4xmhsrmrr0qx8f1xhclw7q4mrrbr5znvy4nvhbzpz6"; depends=[]; }; stemHypoxia = derive2 { name="stemHypoxia"; version="1.17.0"; sha256="076h70m11z178q1v58rbb1731nskck64sr4w29x1jby8h87rqkvk"; depends=[]; }; stjudem = derive2 { name="stjudem"; version="1.21.0"; sha256="1ccr0zcqwffizqbd624j980kn40hmic2497mj2ws19chwqxaz24j"; depends=[]; }; synapterdata = derive2 { name="synapterdata"; version="1.19.0"; sha256="1yppixbw3pxsaag1zfsd39p78d5l8702ysxxjgnmi50ak0lrwb2w"; depends=[synapter]; }; - systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.9.1"; sha256="0hix85s3m17f7xlj4n4qdhff799r4hf78bc5gbpi8djykmbg3glq"; depends=[BiocGenerics]; }; + systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.9.4"; sha256="0k8nybycswz78l0v61nidnirw3i9k41f1150ssglxyhqsvxpn8xd"; depends=[BiocGenerics]; }; + tcgaWGBSData_hg19 = derive2 { name="tcgaWGBSData.hg19"; version="0.99.3"; sha256="16p36sailxw14f051c3k89gz2i9blky0vx961s36mmnd5sqn6skn"; depends=[bsseq ExperimentHub knitr]; }; tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.19.0"; sha256="0mpj8j8s9380lf830b862k2rj1mpfa3vflkai5bacwnx9i3dbmnz"; depends=[]; }; tinesath1probe = derive2 { name="tinesath1probe"; version="1.19.0"; sha256="07fyj1vdpzkz8iw6d9bqxgi4482rvq0r945p3rxa5a0cvwcsh1xi"; depends=[AnnotationDbi]; }; tissueTreg = derive2 { name="tissueTreg"; version="1.1.0"; sha256="1whm1a9r5bmrdzqchv7qzgnxnclq1qbzqjv0p6f6d6y7mw3rr6f6"; depends=[]; }; tofsimsData = derive2 { name="tofsimsData"; version="1.9.0"; sha256="17pwxdik4phg1cc10ycp2j38n63l1rfna8pzz16j05858ig24lif"; depends=[]; }; - topdownrdata = derive2 { name="topdownrdata"; version="1.3.0"; sha256="095mhjpni166p351k50y0605gb3ydsrhdnf8i92w6q84qnl9dapw"; depends=[]; }; + topdownrdata = derive2 { name="topdownrdata"; version="1.3.0"; sha256="095mhjpni166p351k50y0605gb3ydsrhdnf8i92w6q84qnl9dapw"; depends=[topdownr]; }; tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.19.0"; sha256="1gby12vp7b88h3g86r5r01lj86chs30q505qijv3zq769px7fd2g"; depends=[Biobase]; }; - tximportData = derive2 { name="tximportData"; version="1.9.0"; sha256="06jmawmj6sssjjp2jhfzwbzhp8lv2jwbgaaz9qfwbxhnscxzj3cj"; depends=[]; }; - vulcandata = derive2 { name="vulcandata"; version="1.3.0"; sha256="1b7wn4kvqlb4fww98505nwnwfj5knsivx9fzli5fda2k4vzf6d4x"; depends=[]; }; + tximportData = derive2 { name="tximportData"; version="1.9.2"; sha256="0j7nwkfrvli8wx3jvrfn1qygvzyzvmzlp5vq529ssqf6mka8i2r3"; depends=[]; }; + vulcandata = derive2 { name="vulcandata"; version="1.3.1"; sha256="1jgiryn6cpmbipaif5d5yhwrl692hc6nac5abjip31l0rqmf4qig"; depends=[]; }; waveTilingData = derive2 { name="waveTilingData"; version="1.17.0"; sha256="1w0wvnk4r7vvg9xvqmpmwzbp1sr7plg214d6wgdwgmp9bm785vxf"; depends=[]; }; yeastCC = derive2 { name="yeastCC"; version="1.21.0"; sha256="1kbhbqcab7p3p160xvgwka8gfhxnjl05p9hxb7jjixi4yr30dzvj"; depends=[Biobase]; }; yeastExpData = derive2 { name="yeastExpData"; version="0.27.0"; sha256="13vz99brk9bb10swlrisiiwilyjn6pl1z3arw47sahm7grw4sgpc"; depends=[graph]; }; yeastGSData = derive2 { name="yeastGSData"; version="0.19.0"; sha256="06gnrh6kll5rmdvhigrf7blyyap6dz517gkhx2ljvlbwwz1hd35l"; depends=[]; }; yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.17.0"; sha256="0xq65383vmh1jnfxnfhrzfdhr5s0qzy0xb844d8lvmsn77mq7jpr"; depends=[]; }; + yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.19.0"; sha256="0sy72a0dvqq75hg599nfq6rv9frjwmvzqyissksa4dpbm8n3q086"; depends=[]; }; + yri1kgv = derive2 { name="yri1kgv"; version="0.23.0"; sha256="08i7iz0shrhh3pnn88x3fnkpqrics4nq43fcwzkk1582j1spg8yr"; depends=[Biobase GGBase]; }; yriMulti = derive2 { name="yriMulti"; version="0.11.0"; sha256="0gsr2y94hfmjmpz37y7q80wnkhlz8q028qn7dwm15a5rvzvs8ccv"; depends=[dsQTL GenomeInfoDb GenomicFiles GenomicRanges geuvPack gQTLBase Homo_sapiens MultiAssayExperiment SummarizedExperiment VariantAnnotation]; }; - zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="0.115.0"; sha256="11lmhpd94vywkir5m02qb7j278k7hjlp085xq9wgaxmr07vxzyy6"; depends=[]; }; + zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.1.0"; sha256="1sfdzs0s0jjrm36v016zf4xbw2rl2gfibzbzvgj7vark30f8w960"; depends=[]; }; } diff --git a/pkgs/development/r-modules/bioc-packages.nix b/pkgs/development/r-modules/bioc-packages.nix index 78823c4f4688..05715a99922b 100644 --- a/pkgs/development/r-modules/bioc-packages.nix +++ b/pkgs/development/r-modules/bioc-packages.nix @@ -6,11 +6,12 @@ { self, derive }: let derive2 = derive { biocVersion = "3.8"; }; in with self; { - ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.11.3"; sha256="08rrz6binj0hilji6gkdmqvwj0hp1b9rk6jx10gvn6wi3hg1nv4n"; depends=[ABAData data_table GOfuncR gplots gtools Rcpp]; }; + ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.11.7"; sha256="0gzv8nphchispdrlmbx28ps6k7g8ylqldf7p25pimjba700ydjdd"; depends=[ABAData data_table GOfuncR gplots gtools Rcpp]; }; ABSSeq = derive2 { name="ABSSeq"; version="1.35.2"; sha256="0x86y1j8h9ad4vyzadb4xngzfihz73jcy2qrn5d2bpigv3m3rar5"; depends=[limma locfit]; }; ABarray = derive2 { name="ABarray"; version="1.49.0"; sha256="1rnsk81lhybj612rb2b886al567m58ax77kng4ip43ivzd3yssil"; depends=[Biobase multtest]; }; + ACE = derive2 { name="ACE"; version="0.99.10"; sha256="1a2mkw04fdvdfdva0gwsh0d7xkg49gi7dhsxz8ban9g1kn1g5w6z"; depends=[Biobase ggplot2 QDNAseq]; }; ACME = derive2 { name="ACME"; version="2.37.0"; sha256="1ihpzaxhpdg8lvd30g9xhjhsil34s7w8w06cy04dp7zv117yda55"; depends=[Biobase BiocGenerics]; }; - ADaCGH2 = derive2 { name="ADaCGH2"; version="2.21.0"; sha256="107hm5klybm8lp12bjir6gjcka8a5q4c54nvq3sn0avvzcj5caf4"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; }; + ADaCGH2 = derive2 { name="ADaCGH2"; version="2.21.1"; sha256="0ph0glq1ngmhgh8vv1zdm0m6flfkp576fk7qdyb3prc5rc730yxr"; depends=[aCGH bit cluster DNAcopy ff ffbase GLAD snapCGH tilingArray waveslim]; }; AGDEX = derive2 { name="AGDEX"; version="1.29.0"; sha256="0bidzm02g5f4ivnrymg9m7kpmjlg93zv1alpcsjx6ssbaix42r33"; depends=[Biobase GSEABase]; }; AIMS = derive2 { name="AIMS"; version="1.13.0"; sha256="15ch50fw03q66d7x0asri8ff5xr82r8rxd46i80zij1fg27avkxa"; depends=[Biobase e1071]; }; ALDEx2 = derive2 { name="ALDEx2"; version="1.13.0"; sha256="01c4bjbybivjqq1hl9dpmndn3mfk595yyjjkljcxbza6wax99rd0"; depends=[BiocParallel GenomicRanges IRanges multtest S4Vectors SummarizedExperiment]; }; @@ -20,679 +21,728 @@ in with self; { ASAFE = derive2 { name="ASAFE"; version="1.7.0"; sha256="0p6q9zpfqf7cz1lb0cm75ddhhcrdf90dpblrxhn8hkh5wgn3yp0m"; depends=[]; }; ASEB = derive2 { name="ASEB"; version="1.25.0"; sha256="00wwdg07zgqbaparqail1pnffx5r63007rq65shlxda483f3ywr1"; depends=[]; }; ASGSCA = derive2 { name="ASGSCA"; version="1.15.0"; sha256="0f9mih8bhv4ibwqni7z94n4v3kz5cm2paqdp5c0y7hvg9i836gyl"; depends=[MASS Matrix]; }; - ASICS = derive2 { name="ASICS"; version="1.1.0"; sha256="0a81s0yhn4zb8jyq889sz94rf22mrmsnpika0j1hs1sc3h2li3v2"; depends=[BiocParallel ggplot2 gridExtra plyr quadprog ropls speaq SummarizedExperiment zoo]; }; + ASICS = derive2 { name="ASICS"; version="1.1.1"; sha256="18arka0aj4y82ngdx458ilnvxrv45bfjj6dz1wz28frsz7bzhry2"; depends=[BiocParallel ggplot2 gridExtra plyr quadprog ropls speaq SummarizedExperiment zoo]; }; ASSET = derive2 { name="ASSET"; version="1.99.0"; sha256="1c43xdlgqpmq192cxfbpsq6f767zlcmpm7am539673yr6fc8ql7i"; depends=[MASS msm rmeta]; }; - ASSIGN = derive2 { name="ASSIGN"; version="1.17.1"; sha256="06rzdkdq66sl0lxbr3mvw6ybgs2laxyx7iaqgmjwf96b2j869jqb"; depends=[ggplot2 gplots msm Rlab sva]; }; - ASpli = derive2 { name="ASpli"; version="1.7.0"; sha256="19i2says6d2sl160537vzvj9iz5zmrv6xlyprv0787n7yswssy6s"; depends=[AnnotationDbi BiocGenerics BiocStyle edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rsamtools S4Vectors]; }; - ATACseqQC = derive2 { name="ATACseqQC"; version="1.5.1"; sha256="15spnf3a5hangks4k07gyjcnr6cjzxim4zjrjjilyx6jmfc7wiib"; depends=[BiocGenerics Biostrings BSgenome ChIPpeakAnno GenomeInfoDb GenomicAlignments GenomicRanges GenomicScores IRanges KernSmooth limma motifStack preseqR randomForest Rsamtools rtracklayer S4Vectors]; }; - AUCell = derive2 { name="AUCell"; version="1.3.4"; sha256="1v53cq58jj3nvgrj7xrypmw0g4882yma950yc7k9189sdbbxxdm6"; depends=[data_table GSEABase mixtools R_utils shiny SummarizedExperiment]; }; + ASSIGN = derive2 { name="ASSIGN"; version="1.17.4"; sha256="01ly4vislijmaa6vfs4nsawhf3jv7xb5jaa7iaizl7gpm7jnv7bp"; depends=[ggplot2 gplots msm Rlab sva yaml]; }; + ASpli = derive2 { name="ASpli"; version="1.7.2"; sha256="1x30c1srl6sgjpl2milsc06ix5b8ds3kgz2h5wzg9wl4jsfswml3"; depends=[AnnotationDbi BiocGenerics BiocStyle edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rsamtools S4Vectors]; }; + ATACseqQC = derive2 { name="ATACseqQC"; version="1.5.7"; sha256="06aq30lj97xpxxm5f46qlnl2pik44hh4jr7wcbsvjyf3xx99k3za"; depends=[BiocGenerics Biostrings BSgenome ChIPpeakAnno GenomeInfoDb GenomicAlignments GenomicRanges GenomicScores IRanges KernSmooth limma motifStack preseqR randomForest Rsamtools rtracklayer S4Vectors]; }; + AUCell = derive2 { name="AUCell"; version="1.3.6"; sha256="1i88w2jkydspgiw6vdpi1bspajr1y8jwmlxakydm7ww8azib4cwl"; depends=[data_table GSEABase mixtools R_utils shiny SummarizedExperiment]; }; + AffiXcan = derive2 { name="AffiXcan"; version="0.99.15"; sha256="0d5y1s2d30rkwmnr206xjf9rdzn099kirh9pxn0qddjhxl6n6d6c"; depends=[BiocParallel MultiAssayExperiment SummarizedExperiment]; }; AffyCompatible = derive2 { name="AffyCompatible"; version="1.41.0"; sha256="1gxk7kggb29hhfqz2a1g6yqy8mbg0x7gvajnnqgamdggylg7zz32"; depends=[Biostrings RCurl XML]; }; AffyExpress = derive2 { name="AffyExpress"; version="1.47.0"; sha256="1ph5vgm6hxifdyg8v3vgcqwm7k1fh4d3jnf10i4p7x4gi00xycan"; depends=[affy limma]; }; AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.27.0"; sha256="17m0sn1rb6485lvrpn677z3y540pc93ykbyjg1plrl3qby6nxc5q"; depends=[affy]; }; AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.31.0"; sha256="1hxvi9hdx8shikljwbh60k4ylir2hdibkccqd5wr4hb08spnam4j"; depends=[affy affycoretools Biobase limma preprocessCore]; }; - AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.19.0"; sha256="13cw6k6xgkillkj7jfgflgb42nfb85hj919yd1i0css4zi9gxd2w"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra nlme Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; }; + AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.19.1"; sha256="14wh237bkzkczvbsqfv4fsgd1plc7nn2p77a6gcb7pgwz1lbq9is"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra nlme Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; }; + AnalysisPageServer = derive2 { name="AnalysisPageServer"; version="1.15.3"; sha256="1xq8cp8yhjnvrr7wp16zi24qjrwchx3l95w4302qh5hfngr3c8xn"; depends=[Biobase graph log4r rjson]; }; Anaquin = derive2 { name="Anaquin"; version="2.5.0"; sha256="1cqrm7pmirdd23dw8lvrdjfkjp6rgx15s8h88jbilcv7qajg32jc"; depends=[DESeq2 ggplot2 knitr locfit plyr qvalue ROCR]; }; - AneuFinder = derive2 { name="AneuFinder"; version="1.9.0"; sha256="1b0rrnxb8ldw9mxva42m0jj6r2xjn91rnrw409dmk365j8nxva2f"; depends=[AneuFinderData bamsignals Biostrings cowplot DNAcopy doParallel ecp foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; }; + AneuFinder = derive2 { name="AneuFinder"; version="1.9.1"; sha256="0grk4npv8lkf71s9nacmz29g87f7avrfsyb7lpljpg8ndq9cddx3"; depends=[AneuFinderData bamsignals Biostrings cowplot DNAcopy doParallel ecp foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; }; AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.43.1"; sha256="150mxlr5fcid4vnv8gh0imr9y9lzgyxrmvzmah4l8kg7r5rllm6k"; depends=[Biobase BiocGenerics DBI IRanges RSQLite S4Vectors]; }; AnnotationFilter = derive2 { name="AnnotationFilter"; version="1.5.2"; sha256="12lkv4dg25r5p77s84xzyh3aw8pybcdrkvqf21n8xv41gxpycdkq"; depends=[GenomicRanges lazyeval]; }; - AnnotationForge = derive2 { name="AnnotationForge"; version="1.23.0"; sha256="07b8m6g4zm1lj6pxscjyg7b39km8wx68jiqimdd7ddkzj9xqyvg8"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; }; + AnnotationForge = derive2 { name="AnnotationForge"; version="1.23.4"; sha256="1q0j4nn6hb9h22cnqdgqb89710j86kiayyaf98n47pcdyb96024d"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; }; AnnotationFuncs = derive2 { name="AnnotationFuncs"; version="1.31.0"; sha256="1sf2afh9s94k1j9xx7csv7k1cah52s8ks7bhjr13m5c2dad3df1f"; depends=[AnnotationDbi DBI]; }; - AnnotationHub = derive2 { name="AnnotationHub"; version="2.13.1"; sha256="1zhnadp24h7hxjgdgp4x4c2iwnciw6gvi6ycxbql1yilqr3ip6w0"; depends=[AnnotationDbi BiocGenerics BiocInstaller curl httr interactiveDisplayBase RSQLite S4Vectors yaml]; }; - AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.11.1"; sha256="1s7bfmynwx6y555bsxp3cgkfa3gnc0ll476qydszw4agspp8wyn9"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocInstaller biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges GEOquery IRanges jsonlite OrganismDbi rBiopaxParser RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; }; - ArrayExpress = derive2 { name="ArrayExpress"; version="1.41.0"; sha256="1xac01vhc8cdx7cp32qw4cfqyl20my5wdw3jf9mwb6qybjk557w7"; depends=[Biobase limma oligo XML]; }; + AnnotationHub = derive2 { name="AnnotationHub"; version="2.13.10"; sha256="087nk0wmkl3k7i00v9lbxq44gzj7dnyjahbhrq3zjx6qmg4l8dia"; depends=[AnnotationDbi BiocGenerics BiocManager curl httr interactiveDisplayBase RSQLite S4Vectors yaml]; }; + AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.11.14"; sha256="0056p06iyw81pzyy52ydgzibqin84xrmsn5jyaa9a6qs3agm62h6"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocGenerics BiocManager biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges IRanges jsonlite OrganismDbi rBiopaxParser RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; }; + ArrayExpress = derive2 { name="ArrayExpress"; version="1.41.1"; sha256="0x5fvbp959x0pczb8qmy70npdx6p8km5aq6jbfmna5d5l8azd11q"; depends=[Biobase limma oligo XML]; }; ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.31.0"; sha256="16j2a1qyhykzyqggfwaxvp4ay6l9ckimd4djh1qdp3ayqaign04r"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops DESeq edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; }; ArrayTV = derive2 { name="ArrayTV"; version="1.19.0"; sha256="1swim5w679hskgwfdm9fbfdwhlra7wp4fgsl38vmainayna90xw9"; depends=[DNAcopy foreach IRanges oligoClasses S4Vectors]; }; ArrayTools = derive2 { name="ArrayTools"; version="1.41.0"; sha256="1pkv72pkiqxjb0f642p7gdc0gfr7xg9vc96awi149a5z71bbykli"; depends=[affy Biobase limma xtable]; }; + AssessORF = derive2 { name="AssessORF"; version="0.99.21"; sha256="1k2b3psllayv8rwgc7jhhyr73apd51wbwgfhn1lawfvpn2k07gqr"; depends=[Biostrings DECIPHER GenomicRanges IRanges]; }; BAC = derive2 { name="BAC"; version="1.41.0"; sha256="0jk4drgs8w1fvarkhm4sbkm9ls6vh67vja9f2f29p4n0ykgf06y2"; depends=[]; }; BADER = derive2 { name="BADER"; version="1.19.0"; sha256="1y2lw5f6l32q3p3bral7bz2h57fvd7mpj00q4ds6l3y8j8grp3vf"; depends=[]; }; - BAGS = derive2 { name="BAGS"; version="2.21.0"; sha256="1j4284wvpabpzvb3khslfraz6wz5yznv9gsly5xaskximq1i1h74"; depends=[Biobase breastCancerVDX]; }; - BASiCS = derive2 { name="BASiCS"; version="1.3.3"; sha256="0rljf429zjglh7an6m09m0d8skykciksh2k8vjc6jm3rbsl4j1k5"; depends=[BiocGenerics coda data_table ggplot2 KernSmooth MASS matrixStats Rcpp RcppArmadillo S4Vectors scran SingleCellExperiment SummarizedExperiment testthat]; }; - BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.11.0"; sha256="0nma095v38ysx0gjjrp6xslwmi78kgqqzqlmcvbf61qgbpggnqbj"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; }; + BAGS = derive2 { name="BAGS"; version="2.21.2"; sha256="14h103ycmxwpa02binhla0ys5fls2whdgjqj4g40pv96nj5kpwav"; depends=[Biobase breastCancerVDX]; }; + BASiCS = derive2 { name="BASiCS"; version="1.3.24"; sha256="0rxvwpnfvw3nbr8rbrm64hzxx1vzq7rq9jaq20x1nrkkx46gj5s7"; depends=[BiocGenerics coda data_table ggplot2 KernSmooth MASS matrixStats Rcpp RcppArmadillo S4Vectors scran SingleCellExperiment SummarizedExperiment testthat]; }; + BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.11.1"; sha256="1gzivdxz02d27pkad6h6k0n1damph0vncslx70s3h6ypcb3g731j"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; }; BCRANK = derive2 { name="BCRANK"; version="1.43.0"; sha256="06082ki14mb4xrbx32lpi7q06bsnmjsc08ggx0si0fxdbf0584r5"; depends=[Biostrings]; }; - BEARscc = derive2 { name="BEARscc"; version="1.1.0"; sha256="169n512vaa23l3qaxxxa8x6zhy7jqmflsr43dn3k8qncwk1q7pml"; depends=[data_table ggplot2 SingleCellExperiment]; }; + BEARscc = derive2 { name="BEARscc"; version="1.1.1"; sha256="180r40a5f7fmck4jly7d4qrjpyb1xqgp8w6aasvx7qfd9vwqbfbx"; depends=[data_table ggplot2 SingleCellExperiment]; }; BEAT = derive2 { name="BEAT"; version="1.19.0"; sha256="1c3csghkdbqmaj36bg75fnx626rp2myykwc4hpxlij1sy8a9pjra"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; }; - BEclear = derive2 { name="BEclear"; version="1.13.0"; sha256="0swsrlf6rdxkdbncf5f18zxfimmgiay42i12lg5apb5rk9in890c"; depends=[Matrix snowfall]; }; + BEclear = derive2 { name="BEclear"; version="1.13.11"; sha256="1c7bgnpj9wx839dhal4rlfamaxngqxdq2pm3paykqf2cjg278d37"; depends=[BiocParallel data_table futile_logger Matrix Rdpack]; }; BGmix = derive2 { name="BGmix"; version="1.41.0"; sha256="1v6rpn322g4qp3q3hisvi419nnslzpfqdp37bdc1spmsh88inb1j"; depends=[KernSmooth]; }; BHC = derive2 { name="BHC"; version="1.33.0"; sha256="18jpic1xk5gnxfw7r4hw0591lmrcncv412qd1q08l2nqw0a24895"; depends=[]; }; BLMA = derive2 { name="BLMA"; version="1.5.0"; sha256="1cpy2dx1da1bn0wc43fwva2akq473ww4nz241dq5xfrk2hwwkz91"; depends=[Biobase graph GSA limma PADOG ROntoTools]; }; - BPRMeth = derive2 { name="BPRMeth"; version="1.7.13"; sha256="1ypinfv1z6gw73whx0fjkz9h6sl6lzwfcsnfpjrwy94q59rpzyw0"; depends=[assertthat BiocStyle cowplot data_table doParallel e1071 earth foreach GenomicRanges ggplot2 IRanges kernlab magrittr MASS matrixcalc mvtnorm randomForest Rcpp RcppArmadillo S4Vectors truncnorm]; }; - BRAIN = derive2 { name="BRAIN"; version="1.27.0"; sha256="1pssh10b8pqy7f4hs1akws8lvikd0j9rwblrzsymvnnl5qf8rdqm"; depends=[Biostrings lattice PolynomF]; }; - BSgenome = derive2 { name="BSgenome"; version="1.49.1"; sha256="1i0qrm065407zvi454gjdx3rykabf5zwl18l23d7zvl5d9cwcpv2"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors XVector]; }; + BPRMeth = derive2 { name="BPRMeth"; version="1.7.14"; sha256="0gbklnxs0g236f839yq9p3x8yacgv4248yyp1fgazr6q9gcgqqdf"; depends=[assertthat BiocStyle cowplot data_table doParallel e1071 earth foreach GenomicRanges ggplot2 IRanges kernlab magrittr MASS matrixcalc mvtnorm randomForest Rcpp RcppArmadillo S4Vectors truncnorm]; }; + BRAIN = derive2 { name="BRAIN"; version="1.27.1"; sha256="04an1yqsfwkpwr31l4l21p09yr3jbdm4v7m89vg4q0rvlmha31ss"; depends=[Biostrings lattice PolynomF]; }; + BSgenome = derive2 { name="BSgenome"; version="1.49.5"; sha256="18z80kskhgmhar2njmpxba5fg4d6fz651n3bc4lvfxpvn3j2nh9f"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors XVector]; }; BUMHMM = derive2 { name="BUMHMM"; version="1.5.0"; sha256="0qs117jr903zyr55xql7793nr8scyqhfn9acnw4d29im2jwfhclq"; depends=[Biostrings devtools gtools IRanges stringi SummarizedExperiment]; }; BUS = derive2 { name="BUS"; version="1.37.0"; sha256="0rd0d1wm65q1x821l74y96w48dbqdlbd8gzz04fwz2lbpp4x6645"; depends=[infotheo minet]; }; + BUScorrect = derive2 { name="BUScorrect"; version="0.99.13"; sha256="1cbmr2xq1246cypjkf0l05h077bbrhigdhxx6fqkvzrgixw742r3"; depends=[gplots SummarizedExperiment]; }; BaalChIP = derive2 { name="BaalChIP"; version="1.7.0"; sha256="18jvr700mqfqalby53jhjskz2wrfbyl3x6bgx28yxzzg0hk7d897"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; }; - BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.9.0"; sha256="0piq8lc4p23q2y3606kk9y52iwg7nc8jbnmicq44m2gnmp5b9r0m"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; - BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.25.0"; sha256="14p570w1ld2va2xjzk4aq64brx25h8mizcicyrvmlnppj7cwbpmm"; depends=[RCurl RJSONIO]; }; + BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.9.1"; sha256="07m2lj91nk88rjjlqgrqvfwdmvvhsk406bq7wbd3a18hawljrcr6"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; }; + BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.25.1"; sha256="0636123345m2hgip2l7wpbppkav6nryskq3r8sdby09yw3xf8yny"; depends=[RCurl RJSONIO]; }; Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.17.0"; sha256="0ynfj4x0hkjxxza8v85kda2a5rrmwzjh1am3ffnv1mvpi3dnb95l"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; }; BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.9.0"; sha256="074zndzd7dbz31khkn73a3jqfyacl56dd8b82zq5lykirw647zp4"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; }; - BatchQC = derive2 { name="BatchQC"; version="1.9.0"; sha256="1vcpjbalsvlcmrg2wxckpkk1qczwhs5c9yzp7wyk0jff9ayccd7w"; depends=[corpcor d3heatmap ggvis gplots knitr limma Matrix matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; }; + BatchQC = derive2 { name="BatchQC"; version="1.9.2"; sha256="0cg9ymwq08a3jxzpzwqgazz98868swp4ijiaz0h1msp8v30bqydd"; depends=[corpcor d3heatmap ggvis gplots knitr limma Matrix matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; }; BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.7.0"; sha256="0ikq8bk4viw9kj55cci37cdicbmyq9p5fa0vxw0bsa9ichj47cl5"; depends=[Biobase]; }; BayesPeak = derive2 { name="BayesPeak"; version="1.33.0"; sha256="0grhyp7i834sj1j2kavpk2ydy0970gjcvllxy05l9vs9cilhczgp"; depends=[IRanges]; }; BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.33.0"; sha256="0asbgmcidblxj82w5bv0g0c5l9w2nzyr7qparbxg2inxcqimsa37"; depends=[]; }; - BgeeDB = derive2 { name="BgeeDB"; version="2.7.0"; sha256="07y8jh5r6rvx083gdcy7hdlpazmaj17mrbcqi6ysj8j0ipjxsrgv"; depends=[Biobase data_table digest dplyr graph RCurl tidyr topGO]; }; - BiFET = derive2 { name="BiFET"; version="1.1.5"; sha256="0rghzii29k5sqm4bnf86mncly5gln9kn14nzjxb9ycpmls33nfx0"; depends=[GenomicRanges poibin]; }; - BiGGR = derive2 { name="BiGGR"; version="1.17.0"; sha256="1nsjg5lk87i0mrby23jzfxs80cipq2dra4gx2v3mxphiqixrn92i"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; }; - BiRewire = derive2 { name="BiRewire"; version="3.13.0"; sha256="10wgsw38774a6fzwhr98hxiangna3s1rb0i7dw2bvmkx9c6ldmbh"; depends=[igraph Matrix slam tsne]; }; + BgeeDB = derive2 { name="BgeeDB"; version="2.7.2"; sha256="0rk6kfy78xxsd8zbvs2gdklncz5dzr6wayndf3bh7nm575d8jnrd"; depends=[Biobase data_table digest dplyr graph RCurl tidyr topGO]; }; + BiFET = derive2 { name="BiFET"; version="1.1.8"; sha256="0h7lrhfjgxfchk4i1i6y65znr2dxh9zkiy9n6clvrby6aqrswgr3"; depends=[GenomicRanges poibin]; }; + BiGGR = derive2 { name="BiGGR"; version="1.17.1"; sha256="18d57ia7vzgrwc8nzqjp368s7a6hqckcskp807xmk239ggrk9iii"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; }; + BiRewire = derive2 { name="BiRewire"; version="3.13.3"; sha256="09i4mvpbfvnljvg87zgwawv5ahj7kaiqvwx7mlsqkrdzijclfqq3"; depends=[igraph Matrix slam tsne]; }; BiSeq = derive2 { name="BiSeq"; version="1.21.0"; sha256="12wnihb693dk6ri3hqcm7cjyy0r3dffvjcfybypl75zsj42k7zb7"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; }; BicARE = derive2 { name="BicARE"; version="1.39.0"; sha256="1gdglclrkrsxw7lks9rczhjy3ldsrl18qbk6h4f10d3rf6b147b1"; depends=[Biobase GSEABase multtest]; }; - BioCor = derive2 { name="BioCor"; version="1.5.1"; sha256="0wfd7sapzxj135wp6kga0xb8z5ycvvhwdwh1307sh0k8k8wb5pd9"; depends=[BiocParallel GSEABase Matrix]; }; + BioCor = derive2 { name="BioCor"; version="1.5.6"; sha256="1zy4yxwgx70f6sz09kva97p2gby4yjyrqn4zshrdr89npnk5h5rz"; depends=[BiocParallel GSEABase Matrix]; }; BioMVCClass = derive2 { name="BioMVCClass"; version="1.49.0"; sha256="01v6bzq8jsqd3p2cpg0hlfccqzkr9fk9zkby2dg1npwrf27x6j4g"; depends=[Biobase graph MVCClass Rgraphviz]; }; BioNet = derive2 { name="BioNet"; version="1.41.0"; sha256="039mzwvfamlxkqn9ipn7vab7qnnn0153sg7dcp4g5glfxgmqnngh"; depends=[AnnotationDbi Biobase graph igraph RBGL]; }; - BioNetStat = derive2 { name="BioNetStat"; version="1.1.1"; sha256="1jr1z0shh0cspqmg0dqwwqhsljvl53aay19qpss5a64ifas8mzmr"; depends=[BiocParallel ggplot2 Hmisc igraph knitr pathview pheatmap plyr psych RColorBrewer RJSONIO shiny shinyBS whisker yaml]; }; + BioNetStat = derive2 { name="BioNetStat"; version="1.1.2"; sha256="17iyf5k9mm3mqvw7vskk7vcmadrs4qxq69sx024j63ihiq6divkb"; depends=[BiocParallel ggplot2 Hmisc igraph knitr pathview pheatmap plyr psych RColorBrewer RJSONIO shiny shinyBS whisker yaml]; }; BioQC = derive2 { name="BioQC"; version="1.9.0"; sha256="0v9czgv6n57nczg2ijz78dfknvmlbxbdrsi8c90wiyxr888gkb3m"; depends=[Biobase Rcpp]; }; - BioSeqClass = derive2 { name="BioSeqClass"; version="1.39.0"; sha256="1390g5saw7jf6q7k5kavql595jw8xd8y53lwlfmxfgiapf2nvg36"; depends=[Biobase Biostrings class e1071 foreign ipred klaR nnet party randomForest rpart scatterplot3d tree]; }; - Biobase = derive2 { name="Biobase"; version="2.41.1"; sha256="0hfi88z32ma74mc2h0d8xx2m9pqwcwr77f6mfh21sqnkb5mqwsdm"; depends=[BiocGenerics]; }; + BioSeqClass = derive2 { name="BioSeqClass"; version="1.39.2"; sha256="1j9mbp6xdnm24a1vzwq3327dhm9nglydib73nrwcw1jn0am78yqv"; depends=[Biobase Biostrings class e1071 foreign ipred klaR nnet party randomForest rpart scatterplot3d tree]; }; + Biobase = derive2 { name="Biobase"; version="2.41.2"; sha256="11wda45crjk2v7zscrhrh0w30qdqvkxf6zcqyg7jqk833327ci0r"; depends=[BiocGenerics]; }; BiocCaseStudies = derive2 { name="BiocCaseStudies"; version="1.43.0"; sha256="0xdn0zrd034mxzc6khqfnsp0rynfpd7zbxhmcmj5j0h83m9kyfnw"; depends=[Biobase]; }; - BiocCheck = derive2 { name="BiocCheck"; version="1.17.15"; sha256="06wzf7j170bf9msnv61da70hlhv08k5lykwzachij1396514ypr6"; depends=[BiocInstaller biocViews codetools graph httr knitr optparse stringdist]; }; - BiocFileCache = derive2 { name="BiocFileCache"; version="1.5.2"; sha256="170dyswpaxwg8jhw99797n5haixk7pm657dj09ydv8zjb5jaqhz0"; depends=[DBI dbplyr dplyr httr rappdirs RSQLite]; }; + BiocCheck = derive2 { name="BiocCheck"; version="1.17.25"; sha256="1h1lwjpzmwiygfrh4gjh3mw7fjk0ync3xbvw5bl39ykgq9b1dw7h"; depends=[BiocManager biocViews codetools graph httr knitr optparse stringdist]; }; + BiocFileCache = derive2 { name="BiocFileCache"; version="1.5.9"; sha256="1prwqr9xrl47knyx1jddw5in1casj7xyz787qqqlf7xfp8z5kqyf"; depends=[curl DBI dbplyr dplyr httr rappdirs RSQLite]; }; BiocGenerics = derive2 { name="BiocGenerics"; version="0.27.1"; sha256="1v2vqhixnn4caanpnmd0pw7jnczfkc79wlb9c7v0kwpz9h79h023"; depends=[]; }; - BiocInstaller = derive2 { name="BiocInstaller"; version="1.31.1"; sha256="1cprnjbymb2r1z228nyg6bbnridazw6bh6yh0mcfxq6h0cd0ig8y"; depends=[]; }; - BiocOncoTK = derive2 { name="BiocOncoTK"; version="1.1.6"; sha256="01g7drd8c9082kvpw5xyxmans8mksw0rm1s6rv6ml6ibzbxjrz2z"; depends=[bigrquery ComplexHeatmap dplyr DT GenomicRanges httr IRanges magrittr rjson S4Vectors shiny]; }; - BiocParallel = derive2 { name="BiocParallel"; version="1.15.6"; sha256="1ifav2pl6szvs6a5nkkgsf7j70i496q2lsj73gb3li4krm6yslvf"; depends=[BH futile_logger snow]; }; - BiocSklearn = derive2 { name="BiocSklearn"; version="1.3.0"; sha256="1dh0w9h81ydnnwf7dx19an7pja3n511pw16yl0bgmqr8ng51lvwn"; depends=[BBmisc HDF5Array knitr reticulate SummarizedExperiment]; }; - BiocStyle = derive2 { name="BiocStyle"; version="2.9.3"; sha256="1ggbx5c94fr20mykkj3ghsia91c2jdi4yyhrm9jfwxdaxy9k8kfl"; depends=[bookdown knitr rmarkdown yaml]; }; + BiocInstaller = derive2 { name="BiocInstaller"; version="1.31.3"; sha256="10b20kbp8gqfq7fsdcgfpkghndn5aw8c1cj1l67a8a5qibbfq89x"; depends=[]; }; + BiocNeighbors = derive2 { name="BiocNeighbors"; version="0.99.22"; sha256="006map9pk5q4qk2zardgxgirlil4hhvw7vjs4js426qrxqqmhlxn"; depends=[BiocParallel Rcpp RcppAnnoy S4Vectors]; }; + BiocOncoTK = derive2 { name="BiocOncoTK"; version="1.1.22"; sha256="10dnfzxhhvnmkcpdrzwv8810ss3yljfbq0lswa1149ndqyanhdvj"; depends=[bigrquery ComplexHeatmap DBI dplyr DT GenomicFeatures GenomicRanges ggplot2 httr IRanges magrittr rjson S4Vectors shiny SummarizedExperiment]; }; + BiocParallel = derive2 { name="BiocParallel"; version="1.15.15"; sha256="0iqgcmgq1jzayalkym2s1zvblfrwvgp2rc7v09a6mm0hzgbxvh9y"; depends=[BH futile_logger snow]; }; + BiocPkgTools = derive2 { name="BiocPkgTools"; version="0.99.16"; sha256="1lw8llvhfp8vpy72y3dc8dy6xiq3yl71zfry4h1ag3kxh9c4snvh"; depends=[BiocManager dplyr DT htmltools htmlwidgets httr igraph jsonlite readr rex rvest stringr tibble tidyr xml2]; }; + BiocSklearn = derive2 { name="BiocSklearn"; version="1.3.2"; sha256="0zdakw0yrjkxvspc2sb0z70ipx7jrqcnf0br80nrkvg5sxkm5nd0"; depends=[BBmisc knitr reticulate SummarizedExperiment]; }; + BiocStyle = derive2 { name="BiocStyle"; version="2.9.6"; sha256="1b123p3id4ljqcg3xj9lr5x05k1wa67gcl5v2bfi7nv8i6221bn3"; depends=[BiocManager bookdown knitr rmarkdown yaml]; }; BiocVersion = derive2 { name="BiocVersion"; version="3.8.0"; sha256="1kyqzca8n7wggz6lfx7xj0i1h1s3rma15v11iycgkdka58443qqr"; depends=[]; }; - BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.7.1"; sha256="04nxl3idhy3smyvp246vc28509i7hf5qv24zn366q012zdykywzr"; depends=[BiocStyle bookdown devtools git2r httr knitr rmarkdown rstudioapi stringr]; }; - Biostrings = derive2 { name="Biostrings"; version="2.49.0"; sha256="015yg11649nz6w0c8a6jsrjynh047phixssziid64rsff0gf13fv"; depends=[BiocGenerics IRanges S4Vectors XVector]; }; - BitSeq = derive2 { name="BitSeq"; version="1.25.0"; sha256="0ffqwdd5zjwcd819h3rg554c2drvi05l40ffg30p380azk0xkksp"; depends=[IRanges Rsamtools S4Vectors zlibbioc]; }; + BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.7.5"; sha256="1k39zcfdwzddrfaakh3nchwc3xlq63x2dzybj7xj0xhjj14klyr1"; depends=[BiocStyle bookdown devtools git2r httr knitr rmarkdown rstudioapi stringr]; }; + Biostrings = derive2 { name="Biostrings"; version="2.49.2"; sha256="0fm0vfi5s7d0xzwanq5rrdh0fp394qnd7jcmlsib6naqjch0zqaf"; depends=[BiocGenerics IRanges S4Vectors XVector]; }; + BitSeq = derive2 { name="BitSeq"; version="1.25.2"; sha256="05vkx8wr53qfsyjcmfp31768qycmrcbanqfwh1x0l7456v0hmbcv"; depends=[IRanges Rsamtools S4Vectors zlibbioc]; }; BrainStars = derive2 { name="BrainStars"; version="1.25.0"; sha256="0svlrnd131m2lrpafxcpzbjqj3pvzcsi6azk1f4l2f21yimmx2iq"; depends=[Biobase RCurl RJSONIO]; }; - BridgeDbR = derive2 { name="BridgeDbR"; version="1.15.1"; sha256="0fd6v87qhv7mjmsw5xs6r3bs52h1axm150jp6vng4ph20jq8gicg"; depends=[RCurl rJava]; }; + BridgeDbR = derive2 { name="BridgeDbR"; version="1.15.2"; sha256="1rmdyh16qkhqad0xdhqi2vxzi1ga3gmxfl81nqnb5pm1vp0rr4ns"; depends=[RCurl rJava]; }; BrowserViz = derive2 { name="BrowserViz"; version="2.3.0"; sha256="0f4hayj2iinfqiwpl53nmnw0cfv9p6sz25ggwpz1pyib24n2n9b6"; depends=[BiocGenerics httpuv jsonlite]; }; BubbleTree = derive2 { name="BubbleTree"; version="2.11.0"; sha256="0a69azv8v67jfdyg9mfaf58g1v3b09brhr2fvgl2lq7d48gi0cbh"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr RColorBrewer WriteXLS]; }; BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.45.0"; sha256="0qr9dsdh04msxva28n37shjk4j6a4m0i5v4plkk7qpvb6ccbvrf8"; depends=[]; }; BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.45.0"; sha256="1v2yh5pvjc3x25nq6cdqazm1x80ir2qz4jlmssgd31n1bz8r4x48"; depends=[BufferedMatrix]; }; - CAFE = derive2 { name="CAFE"; version="1.17.0"; sha256="1rgb3wk41q1079i959fjr81jwqd8r3rj0n781hfxbn9b5kia5inq"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; }; - CAGEfightR = derive2 { name="CAGEfightR"; version="1.1.0"; sha256="09hf2xla5dl9gh59aa024z23j5lnqdrnamf34fw0r2p394qfz9gz"; depends=[assertthat BiocGenerics BiocParallel GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges grr Gviz IRanges Matrix Matrix_utils pryr rtracklayer S4Vectors SummarizedExperiment]; }; + CAFE = derive2 { name="CAFE"; version="1.17.1"; sha256="057pw96g13h5sak0scqyn2qsfm3dqz7qmqrasjf4vnp2zz059blp"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; }; + CAGEfightR = derive2 { name="CAGEfightR"; version="1.1.5"; sha256="0604b35q82x6brwmg31ks3k77r9f287fr4azgl0bcphj71g9ijc3"; depends=[assertthat BiocGenerics BiocParallel GenomeInfoDb GenomicFeatures GenomicFiles GenomicInteractions GenomicRanges grr Gviz InteractionSet IRanges Matrix Matrix_utils pryr rtracklayer S4Vectors SummarizedExperiment]; }; + CAGEr = derive2 { name="CAGEr"; version="1.23.5"; sha256="181vj5kmny36vdvyzvjpxvj7n0q35cq1nv28ph5v6i5xf6ymyj47"; depends=[beanplot BiocGenerics BiocParallel BSgenome data_table DelayedArray formula_tools GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges KernSmooth memoise MultiAssayExperiment plyr reshape Rsamtools rtracklayer S4Vectors som stringdist stringi SummarizedExperiment vegan VGAM]; }; CALIB = derive2 { name="CALIB"; version="1.47.0"; sha256="1j486knj1l7chda7gdlkkzrrs7vwi39brzkshj1zcsn87r9j1j09"; depends=[limma]; }; CAMERA = derive2 { name="CAMERA"; version="1.37.0"; sha256="0n0xvhcy3y84cq6q45ms56z4nrs6q762iqgxp266kpl93z16rw4v"; depends=[Biobase graph Hmisc igraph RBGL xcms]; }; - CAMTHC = derive2 { name="CAMTHC"; version="0.99.6"; sha256="02gv6vqahyy7fqy0vihqsvd811d65znfjz5jmshn03qp27av11wk"; depends=[apcluster Biobase BiocParallel corpcor DMwR geometry NMF pcaPP rJava SummarizedExperiment]; }; - CATALYST = derive2 { name="CATALYST"; version="1.5.3"; sha256="1b2gfqzb9bp4k830lyn9d87xhzcdqb2vrykihp36r96gj1g6hdg4"; depends=[Biobase circlize ComplexHeatmap ConsensusClusterPlus dplyr drc DT flowCore FlowSOM ggplot2 ggrepel gridExtra htmltools limma magrittr matrixStats nnls plotly RColorBrewer reshape2 Rtsne S4Vectors scales shiny shinyBS shinydashboard shinyjs SummarizedExperiment tidyr]; }; + CAMTHC = derive2 { name="CAMTHC"; version="0.99.7"; sha256="1m2qpf3ssn7h7qj96021kbg3h8sfkbggq4dfxd4xz3px8vra5q82"; depends=[apcluster Biobase BiocParallel corpcor DMwR geometry NMF pcaPP rJava SummarizedExperiment]; }; + CATALYST = derive2 { name="CATALYST"; version="1.5.9"; sha256="1xxa2sv7a75wr2py7ah8lwqhgrbbic25cq9lf3gb73iaid994fy9"; depends=[Biobase circlize ComplexHeatmap ConsensusClusterPlus dplyr drc DT flowCore FlowSOM ggplot2 ggrepel ggridges gridExtra htmltools limma magrittr Matrix matrixStats nnls plotly RColorBrewer reshape2 Rtsne S4Vectors scales shiny shinyBS shinydashboard shinyjs SummarizedExperiment tidyr]; }; CAnD = derive2 { name="CAnD"; version="1.13.0"; sha256="07ypm7zz4hf64q478b7s2q46m3imcs0kjc77gkwxky3ymsvid07y"; depends=[ggplot2 reshape]; }; CCPROMISE = derive2 { name="CCPROMISE"; version="1.7.0"; sha256="1yb8idgdka7psnwa7w94lsld8ghphhdz8kcyvp1na6l88lyc2iyi"; depends=[Biobase CCP GSEABase PROMISE]; }; - CEMiTool = derive2 { name="CEMiTool"; version="1.5.0"; sha256="0h45vf64fg0pkh73k2wplfi26w3j4rnh7gyfnx9ia5bkm0z7l2fj"; depends=[clusterProfiler data_table DT fgsea ggdendro ggplot2 ggpmisc ggrepel ggthemes gRbase gridExtra gtable htmltools igraph intergraph knitr matrixStats network pracma rmarkdown scales sna stringr WGCNA]; }; + CEMiTool = derive2 { name="CEMiTool"; version="1.5.1"; sha256="1jvnpinmyjcpss3wm7kchdksjc5a5a64vdymj9ada38q3j9ni3fd"; depends=[clusterProfiler data_table DT fgsea ggdendro ggplot2 ggpmisc ggrepel ggthemes gRbase gridExtra gtable htmltools igraph intergraph knitr matrixStats network pracma rmarkdown scales sna stringr WGCNA]; }; CFAssay = derive2 { name="CFAssay"; version="1.15.0"; sha256="06xq5rwbbgxknymn061ck1vyqlb8l715cpf7k40w3l4v95h02jiz"; depends=[]; }; CGEN = derive2 { name="CGEN"; version="3.17.0"; sha256="1i31ckwfw6nx0fpfg2g8zq83r6zykvkxfrqkib9kj4wvxx24kvcx"; depends=[mvtnorm survival]; }; - CGHbase = derive2 { name="CGHbase"; version="1.41.0"; sha256="0yvg2jjqs98lrrybpygc77npfj27h5mkdrh3y5mfd5s6jzvyc8pz"; depends=[Biobase marray]; }; + CGHbase = derive2 { name="CGHbase"; version="1.41.2"; sha256="1ncy4lxvzpbs3nrwdyk56scmirgi2a3byi6dcja35syqpw2hdqip"; depends=[Biobase marray]; }; CGHcall = derive2 { name="CGHcall"; version="2.43.0"; sha256="1r8df0xvnhzwhbg1l1wp474f85j6l1g2ivvzmqxcqr5va1clz6g9"; depends=[Biobase CGHbase DNAcopy impute snowfall]; }; CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.35.0"; sha256="0bas6wmdw9h8ablm85ggbb776nfxrf4lpfvv5rkahd10b35y3x4b"; depends=[Biobase CGHbase CGHcall]; }; CGHregions = derive2 { name="CGHregions"; version="1.39.0"; sha256="0r3gvrinr7f5qn89v6rs5bxx4sjalsjl0f2cf6vzbzgnmdysarns"; depends=[Biobase CGHbase]; }; CHARGE = derive2 { name="CHARGE"; version="1.1.0"; sha256="05zqkiqnc82bmb580f16v6d02kfq55sdrm0nxk86h5kp1cs8fryk"; depends=[cluster diptest factoextra FactoMineR GenomicRanges IRanges matrixStats modes plyr SummarizedExperiment]; }; - CHRONOS = derive2 { name="CHRONOS"; version="1.9.0"; sha256="17zxbbdy1ibsj4991iazm6rny2x4xx7rzknkc6z348fzxk2m7g0x"; depends=[biomaRt circlize doParallel foreach graph openxlsx RBGL RCurl XML]; }; - CINdex = derive2 { name="CINdex"; version="1.9.0"; sha256="1rixd0fylffc77hlc7cig7viwdhdy9r68cb3qba16sd5ywbg74gs"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; }; + CHRONOS = derive2 { name="CHRONOS"; version="1.9.2"; sha256="01r3zd0vq4qp40sxvcp7h23713addck5d463b3vyimz7y1x07cqv"; depends=[biomaRt circlize doParallel foreach graph openxlsx RBGL RCurl XML]; }; + CINdex = derive2 { name="CINdex"; version="1.9.1"; sha256="1g24rbbhpq90c6cqjx96pxz4vlj3kyxvc9ad3hibbkljr705rs77"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; }; CMA = derive2 { name="CMA"; version="1.39.0"; sha256="05yx2rwnrzdsgbyv86iyy17qiz6sy91bl6y3qf29aid3yndawc1s"; depends=[Biobase]; }; CNAnorm = derive2 { name="CNAnorm"; version="1.27.0"; sha256="152cwha5mg66vc1ax6k2mwnahwj0cgcs3khii747y3xxn4p8m0z5"; depends=[DNAcopy]; }; - CNEr = derive2 { name="CNEr"; version="1.17.3"; sha256="0gf354j2vynrjl3afbifqkd276q2qz2ywwc7661gqxcjz26jirxq"; depends=[annotate BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; }; - CNORdt = derive2 { name="CNORdt"; version="1.23.0"; sha256="14iadllrhjc1jp4njlr88bhjyb84f3gnbwjzld4n5v8s8ra8xj3a"; depends=[abind CellNOptR]; }; - CNORfeeder = derive2 { name="CNORfeeder"; version="1.21.0"; sha256="1l1ij3r0rdywm0k47iy66v3sy0i23pr8zly1blyzpbxaqhmks3h1"; depends=[CellNOptR graph]; }; - CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.23.0"; sha256="1z1fs64kd575hmmzxa7hx0lxkvd93mzdygw3h4g1sa2fyr9xycfb"; depends=[CellNOptR nloptr]; }; - CNORode = derive2 { name="CNORode"; version="1.23.0"; sha256="1r8sv5rdfpc1qjhdmz05p6gny03r1rxzayiwwbkh0xj6iwswbqdz"; depends=[CellNOptR genalg]; }; + CNEr = derive2 { name="CNEr"; version="1.17.4"; sha256="1pyv4j04ls6l5b1y80rrwjygyp2bii8psxvswyb70flpi18gs0jp"; depends=[annotate BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; }; + CNORdt = derive2 { name="CNORdt"; version="1.23.1"; sha256="044sgjrziy70b4xdlyl56y90p5cddcp5iwfbfcwbzfpz9hbqas4l"; depends=[abind CellNOptR]; }; + CNORfeeder = derive2 { name="CNORfeeder"; version="1.21.1"; sha256="1dvwj9q37hx6jrvzvlnkzqs3gl7abhm5b9v4xghp8ak00cwx19n6"; depends=[CellNOptR graph]; }; + CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.23.1"; sha256="13dn4lnm5z0j817hxp513yas96918nvk363bwqy4gd6aps5nhi6k"; depends=[CellNOptR nloptr]; }; + CNORode = derive2 { name="CNORode"; version="1.23.1"; sha256="0f5lfyfvch8bp0prl5q3i8zmj0dbw50v6i48padgq3ajyszp86dx"; depends=[CellNOptR genalg]; }; + CNPBayes = derive2 { name="CNPBayes"; version="1.11.8"; sha256="007r98f177iw6qbsrz33pa6jsr236j45pdm6h4alg7c813blhiq3"; depends=[BiocGenerics coda combinat dplyr GenomeInfoDb GenomicRanges ggplot2 gtools IRanges magrittr matrixStats mclust purrr RColorBrewer Rcpp reshape2 S4Vectors scales SummarizedExperiment tibble tidyr]; }; CNTools = derive2 { name="CNTools"; version="1.37.0"; sha256="1hzdyjkbwv5iwapkf7a04r55gi1m0bg2ckjkmj4v94kfc5031nwc"; depends=[genefilter]; }; - CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.13.0"; sha256="1pjmrdxg56gjwzbzvs38pdziymhsny9wnj4f5xqkmnkw6ps7v0m1"; depends=[exomeCopy foreach GenomeInfoDb GenomicRanges ggplot2 gplots IRanges NOISeq openxlsx plyr reshape2 Rsamtools S4Vectors shiny shinyFiles shinyjs stringr testthat]; }; + CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.13.2"; sha256="0mzssf1w9yal8z9lg6b6wjhr3wgs7r03k2rsdi9baiwaiwvqjca5"; depends=[exomeCopy foreach GenomeInfoDb GenomicRanges ggplot2 gplots IRanges NOISeq openxlsx plyr reshape2 Rsamtools S4Vectors shiny shinyFiles shinyjs stringr testthat]; }; CNVrd2 = derive2 { name="CNVrd2"; version="1.19.0"; sha256="0xdkckwys2963ylj2mid10k9dwwwmsks29pdp5z4266z0z3r9x9b"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; }; CNVtools = derive2 { name="CNVtools"; version="1.75.0"; sha256="1x70y389szy3b6vimlpzjsqdg4kykmx01wfw8aks5hxq9z23vaik"; depends=[survival]; }; - CODEX = derive2 { name="CODEX"; version="1.13.0"; sha256="1zfg0ka7cvrd1pp4qv8a25crkq78v0qm73z8x4246rlyzvnnxds5"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; }; - COHCAP = derive2 { name="COHCAP"; version="1.27.1"; sha256="0a241dbwj6q0x7r3af252dvdv9i07vbslz0nc532gwv8r56426pw"; depends=[BH COHCAPanno gplots RColorBrewer Rcpp RcppArmadillo WriteXLS]; }; - COMPASS = derive2 { name="COMPASS"; version="1.19.0"; sha256="025gd220j77l4w55k9kmpr3438ffbjhq93ivc124jq3yr7qmpfgc"; depends=[abind BiocStyle clue data_table dplyr knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang rmarkdown scales tidyr]; }; - CONFESS = derive2 { name="CONFESS"; version="1.9.0"; sha256="03rdyklmk31pzg4q6gn8j501gx5hh7awbx4xbvgnw0hzk8753lbb"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; }; + COCOA = derive2 { name="COCOA"; version="0.99.8"; sha256="07r7lv3kaf4lq4mgbgp5yym373mm949qs6wiwc5zvkkaka3rm6zx"; depends=[Biobase BiocGenerics ComplexHeatmap data_table GenomicRanges ggplot2 IRanges MIRA S4Vectors tidyr]; }; + CODEX = derive2 { name="CODEX"; version="1.13.1"; sha256="0mrr40660358n2f31phzmagwfg7fxdmmyhmcaqf17cdcyp9cnslb"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; }; + COHCAP = derive2 { name="COHCAP"; version="1.27.5"; sha256="13b7ms1j1p6qfyvipzipm2qnr50rhzf0hm9h6h8g6rwvkxxqbvci"; depends=[BH COHCAPanno gplots RColorBrewer Rcpp RcppArmadillo WriteXLS]; }; + COMPASS = derive2 { name="COMPASS"; version="1.19.4"; sha256="061jy33qvsvadi3a8ccwqh02nmnhhs8khy7vixf9akndl2jqbzqz"; depends=[abind BiocStyle clue data_table dplyr knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang rmarkdown scales tidyr]; }; + CONFESS = derive2 { name="CONFESS"; version="1.9.1"; sha256="0v334w2252mvc4qmpz5wnwz7xk99nj2izj61qhaafiaqq9wk3f5i"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; }; CORREP = derive2 { name="CORREP"; version="1.47.0"; sha256="061hyv2jxhjpwycv9c0s0881nsq1z3pm0jcn9simdha55hzb20hs"; depends=[e1071]; }; COSNet = derive2 { name="COSNet"; version="1.15.0"; sha256="0irkzh1rm430y5a67rx0rzc4bgb9zg9jyh768bgl1mcf3hjdqsgl"; depends=[]; }; - CRISPRseek = derive2 { name="CRISPRseek"; version="1.21.0"; sha256="1jnwr3jy0ak9nv4x6n9n5zfggmrr849y4rw8qq819ig6a3swafqz"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges S4Vectors seqinr]; }; + CRISPRseek = derive2 { name="CRISPRseek"; version="1.21.4"; sha256="1ck8pqwm2g4fwibd5lbj9r04ryqhw93r7rn1djp7mfxp829asfl7"; depends=[BiocGenerics BiocParallel Biostrings BSgenome data_table hash IRanges S4Vectors seqinr]; }; CRImage = derive2 { name="CRImage"; version="1.29.0"; sha256="1b5giadnwi8h4x8bmkw5064grhaijmnkidbbd8fi2pc1pz406fli"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; }; CSAR = derive2 { name="CSAR"; version="1.33.0"; sha256="1i2amxpka75l91bhvfdwzs85hcl9c11rz82l2xsjybj0ff3v0m91"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; CSSP = derive2 { name="CSSP"; version="1.19.0"; sha256="1ic79b6cg68ylwj9r7ak21m1fbwrys3kwcllmhpdf8v0fldk6qld"; depends=[]; }; - CTDquerier = derive2 { name="CTDquerier"; version="1.1.0"; sha256="00y2cm7sbzkb7q8xn4jqh1478v6jhjrcmhgc2y3h13abb0v93xl0"; depends=[BiocFileCache ggplot2 gridExtra igraph rappdirs RCurl S4Vectors stringdist stringr]; }; - CVE = derive2 { name="CVE"; version="1.7.12"; sha256="0v39bkic6wxhh2asj0sf1cb0amvrli56ni5dxy6ilnka8437ywyw"; depends=[ape ConsensusClusterPlus ggplot2 gplots jsonlite plyr RColorBrewer shiny tidyverse WGCNA]; }; + CTDquerier = derive2 { name="CTDquerier"; version="1.1.2"; sha256="1sy46i32ylyny88992x6l9csn9aji7vjki6i47wdp6a0zi2s9q23"; depends=[BiocFileCache ggplot2 gridExtra igraph rappdirs RCurl S4Vectors stringdist stringr]; }; + CVE = derive2 { name="CVE"; version="1.7.13"; sha256="1sw0kiivd411hbr3jhvdpgl8b56f7w8vlxykyjgr47dbyn6nwbcd"; depends=[ape ConsensusClusterPlus ggplot2 gplots jsonlite plyr RColorBrewer shiny tidyverse WGCNA]; }; CancerInSilico = derive2 { name="CancerInSilico"; version="2.1.0"; sha256="1rpphiy5bda3gpfscgyzci5dynyqdia5nb720pdjzxbz9xkr87f5"; depends=[BH Rcpp]; }; CancerMutationAnalysis = derive2 { name="CancerMutationAnalysis"; version="1.23.0"; sha256="1dxw34fbr25q20k7z9isl4r0w5gz8jj1a0hd9kb4nqhm1yzilpai"; depends=[AnnotationDbi limma qvalue]; }; CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.7.0"; sha256="09c7k5789i4afsgk1vxbz036s5gyxlnwmmwwpcgq0v4y920s37w3"; depends=[cluster ConsensusClusterPlus iCluster impute limma NMF sigclust SNFtool survival]; }; - Cardinal = derive2 { name="Cardinal"; version="1.13.0"; sha256="0iq9b3357c0drhy0yh1rk71z9bh7g6dxh4wwjvwig1bnd3wy506d"; depends=[Biobase BiocGenerics irlba lattice matter ProtGenerics signal sp]; }; - Category = derive2 { name="Category"; version="2.47.0"; sha256="0nrac7r5f13byc68h38ii1jld3m7w63qr340mnaylc2vc2ics6jz"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI genefilter graph GSEABase Matrix RBGL]; }; + Cardinal = derive2 { name="Cardinal"; version="1.99.1"; sha256="0pd5b3bvgcpylml6fkw5zr6kalzjqzkdyygrj2jcqyr73ln2hvxg"; depends=[Biobase BiocGenerics BiocParallel dplyr EBImage irlba lattice magrittr matter ProtGenerics S4Vectors signal sp]; }; + Category = derive2 { name="Category"; version="2.47.1"; sha256="1lg7adkrj3gsvbzkwdvrrpqv911p7ysqwimgj8silrk1vb21pghv"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI genefilter graph GSEABase Matrix RBGL]; }; CausalR = derive2 { name="CausalR"; version="1.13.0"; sha256="0npjg5zg4ckqhgjayb0rxvaaggbd52n61bs7mba6f20dnq1x0q5j"; depends=[igraph]; }; - CellMapper = derive2 { name="CellMapper"; version="1.7.0"; sha256="0jxanbmhi4004kilhdd19fp12yyjx8dcy91iify4ivrhp9c4xwr0"; depends=[S4Vectors]; }; - CellNOptR = derive2 { name="CellNOptR"; version="1.27.0"; sha256="0ig7g50lmy8z3b00adkanmr7nz56nf35ayfbxby2phpxirqf15wj"; depends=[ggplot2 graph hash RBGL RCurl Rgraphviz XML]; }; - CellScore = derive2 { name="CellScore"; version="1.1.0"; sha256="11hsyz15b8kfmb8vjgpwy5hgkmcizlv4ygnw0ffmkvpnjmlib4rm"; depends=[Biobase gplots lsa RColorBrewer squash]; }; - CellTrails = derive2 { name="CellTrails"; version="0.99.12"; sha256="10fn3vkkvjva6np8nkb39dxwkybac567rc0xxn09wlnxpqmfh8i7"; depends=[Biobase BiocGenerics cba dendextend dtw EnvStats ggplot2 ggrepel igraph maptree mgcv reshape2 Rtsne SingleCellExperiment SummarizedExperiment]; }; - CexoR = derive2 { name="CexoR"; version="1.19.1"; sha256="1yga6kc562ginzzb0cq8icyjkbj599j9q4hxzgd6hhf5590nfjfy"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; }; - ChIC = derive2 { name="ChIC"; version="1.1.0"; sha256="1nh1dcqzf3m5gpkgblf7lx599c8dxm7gk53d7y12a7mdlrnzsh5j"; depends=[BiocGenerics caret caTools ChIC_data GenomicRanges IRanges S4Vectors spp]; }; + CellMapper = derive2 { name="CellMapper"; version="1.7.1"; sha256="18w6mxmx58rh93alrxfvqnkg3m28wrycvm5pcm5zr7kvckgd9zlr"; depends=[S4Vectors]; }; + CellNOptR = derive2 { name="CellNOptR"; version="1.27.1"; sha256="1rbn2dbch4mf7ckgbh16zv85imz3wrv97gc618m3q0swp03589ay"; depends=[ggplot2 graph hash RBGL RCurl Rgraphviz XML]; }; + CellScore = derive2 { name="CellScore"; version="1.1.1"; sha256="1fwnzggm0kldackdcr8ssb0g9448gkddv632aipp6ksqw609qn52"; depends=[Biobase gplots lsa RColorBrewer squash]; }; + CellTrails = derive2 { name="CellTrails"; version="0.99.15"; sha256="0pg0wqcfwwq7y8xqm0dcpkmn7j1vd3c0ivcyij11li2znmhamsm9"; depends=[Biobase BiocGenerics cba dendextend dtw EnvStats ggplot2 ggrepel igraph maptree mgcv reshape2 Rtsne SingleCellExperiment SummarizedExperiment]; }; + CexoR = derive2 { name="CexoR"; version="1.19.3"; sha256="1cia3bhplk559pz1znmqnfxy3zpzbg55489gadankpz3kz7n73xd"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; }; + ChAMP = derive2 { name="ChAMP"; version="2.11.5"; sha256="1m6br9h75j9c659a4zhadghwf7aisc3sm2mz9s67fy3hlncmlska"; depends=[bumphunter ChAMPdata combinat dendextend DMRcate DNAcopy doParallel FEM GenomicRanges globaltest goseq Hmisc Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest illuminaio impute isva limma marray matrixStats minfi missMethyl plotly plyr preprocessCore prettydoc quadprog qvalue RColorBrewer rmarkdown RPMM shiny shinythemes sva wateRmelon]; }; + ChIC = derive2 { name="ChIC"; version="1.1.09"; sha256="1730yssk9ig84mbzbvs0rhszscp00sbqqhhvl559gfacajs5gv85"; depends=[BiocGenerics caret caTools ChIC_data GenomicRanges IRanges progress S4Vectors spp]; }; ChIPComp = derive2 { name="ChIPComp"; version="1.11.0"; sha256="0lia22xjj1w8m7hwpfcyaf6cldk05f78v93x3p947xdrkymx6lgc"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; }; - ChIPQC = derive2 { name="ChIPQC"; version="1.17.0"; sha256="0d68nizvlp9gx9s33s5ll4pmrp7rhpjd3xqc8pngc3zvwa4sjg96"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; }; + ChIPQC = derive2 { name="ChIPQC"; version="1.17.1"; sha256="0cpii7sxp1vab5wnnm00kifqnmxxr8hc4rnb8l4wmk5ib4ijqpra"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; }; ChIPSeqSpike = derive2 { name="ChIPSeqSpike"; version="1.1.0"; sha256="15w26zchxjggz8236afgykdncdzim9n3lyr4bm5p7qxzqs8aigbv"; depends=[BiocGenerics corrplot GenomicRanges ggplot2 IRanges LSD Rsamtools rtracklayer S4Vectors seqplots stringr]; }; - ChIPanalyser = derive2 { name="ChIPanalyser"; version="1.3.0"; sha256="08cwdrafzq4ilvck21dc49nf0mjb27vbxrb8i860pfdd77i08hz4"; depends=[Biostrings BSgenome GenomicRanges IRanges RcppRoll rtracklayer S4Vectors]; }; - ChIPexoQual = derive2 { name="ChIPexoQual"; version="1.5.0"; sha256="17w5qibbn4gpvmzndmh3igzbkvzljk88nkz7imld01n8wp4f0kni"; depends=[BiocParallel biovizBase broom data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 hexbin IRanges RColorBrewer rmarkdown Rsamtools S4Vectors scales viridis]; }; - ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.15.0"; sha256="0hck74qkrg4m9w30lag9jfv0ikh2q9d95fa73zjcbdil7n792l7k"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller biomaRt Biostrings BSgenome DBI DelayedArray ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GO_db graph idr IRanges limma matrixStats multtest RBGL regioneR Rsamtools S4Vectors seqinr SummarizedExperiment VennDiagram]; }; - ChIPseeker = derive2 { name="ChIPseeker"; version="1.17.0"; sha256="0002vn7kw83c8lzyrdkwi5c3vpkld3xihfa8zlx6hz41221im2vb"; depends=[AnnotationDbi BiocGenerics boot dplyr enrichplot GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gridBase gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene UpSetR]; }; - ChIPseqR = derive2 { name="ChIPseqR"; version="1.35.0"; sha256="0q5s9pzdmiv2z6cjvy24nzpqsblr2p60qrd8kdgkh8hxx6wq79f1"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; }; - ChIPsim = derive2 { name="ChIPsim"; version="1.35.0"; sha256="1rz89zn383j8pa3g3rgabiw6zcg9h1nfbrmln4vwbbk6yk877l5l"; depends=[Biostrings IRanges ShortRead XVector]; }; - ChemmineOB = derive2 { name="ChemmineOB"; version="1.19.0"; sha256="0w9pr4k12a8c8h69ycn231igd74a8m72v1icii11jiijl3i9hfg3"; depends=[BH BiocGenerics Rcpp zlibbioc]; }; - ChemmineR = derive2 { name="ChemmineR"; version="3.33.1"; sha256="1dzm3cw6i3k38p9i0yzf0bcad8zqvkip434k11ppplk5ch923rzi"; depends=[base64enc BH BiocGenerics DBI digest DT ggplot2 gridExtra png Rcpp RCurl rjson rsvg]; }; + ChIPXpress = derive2 { name="ChIPXpress"; version="1.25.0"; sha256="0px8vpyiay60fb2qvjax7mkijkmix41vaa34g9s6ahzp7mxxhwyz"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; }; + ChIPanalyser = derive2 { name="ChIPanalyser"; version="1.3.7"; sha256="0lrpymicyi3fphw7vj1bcrgl00fpld7436kfffdwrmjla7m6539w"; depends=[BiocManager Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges RcppRoll ROCR rtracklayer S4Vectors]; }; + ChIPexoQual = derive2 { name="ChIPexoQual"; version="1.5.1"; sha256="1691808rn2jw08aivd2vsys279kbzs9ndf7brlgyaxaii3lxm2hc"; depends=[BiocParallel biovizBase broom data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 hexbin IRanges RColorBrewer rmarkdown Rsamtools S4Vectors scales viridis]; }; + ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.15.2"; sha256="1b5kg8vh37pslj5ckavz401pxpy1xgak9jsanfjb76wjbpyadzm0"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager biomaRt Biostrings BSgenome DBI DelayedArray ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GO_db graph idr IRanges limma matrixStats multtest RBGL regioneR Rsamtools S4Vectors seqinr SummarizedExperiment VennDiagram]; }; + ChIPseeker = derive2 { name="ChIPseeker"; version="1.17.2"; sha256="0gnb451jh6fscpgywbclk0plfmha4zxpzpf3lq6y9kyvxk9v2cqp"; depends=[AnnotationDbi BiocGenerics boot dplyr enrichplot GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gridBase gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene UpSetR]; }; + ChIPseqR = derive2 { name="ChIPseqR"; version="1.35.2"; sha256="11pw2265qni3j20jn7kmxmw5gjf01x34vzsfnv6j4cn8k4hpl6l7"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; }; + ChIPsim = derive2 { name="ChIPsim"; version="1.35.2"; sha256="0nrwi9xy224g9r923gwkmmcq7ld4vnfwsgafiw7i1n20vsj85gyj"; depends=[Biostrings IRanges ShortRead XVector]; }; + ChemmineOB = derive2 { name="ChemmineOB"; version="1.19.3"; sha256="0c2xlkf1y15lqp7yibzp1wlknyf4l5wm8zwqf0s2grp3snc3zcv0"; depends=[BH BiocGenerics Rcpp zlibbioc]; }; + ChemmineR = derive2 { name="ChemmineR"; version="3.33.5"; sha256="0ydl1hz4hjiln4kpym7kdswbn7rddafpvsanblqbivy58p8vxkhk"; depends=[base64enc BH BiocGenerics DBI digest DT ggplot2 gridExtra png Rcpp RCurl rjson rsvg]; }; Chicago = derive2 { name="Chicago"; version="1.9.0"; sha256="0b3j250w0piasfs3jbyycy9w4snvrn7vbaq31hhj150gjvphsgzk"; depends=[data_table Delaporte Hmisc MASS matrixStats]; }; ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.35.0"; sha256="18xgngy77rj8q91bj9v8kpzqijz15ax5w9db0xiyrspvi39z4fx4"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; }; - ClassifyR = derive2 { name="ClassifyR"; version="2.1.6"; sha256="0xnayr0w00nwmg9j6x6kl6i66l46ai734ifmgvdpgg18d6zi7zhr"; depends=[BiocParallel locfit MultiAssayExperiment plyr S4Vectors]; }; - Clomial = derive2 { name="Clomial"; version="1.17.2"; sha256="0kl6fbgrihbz2qk7gzpdjclh9x874kb0wsk3615b21ra9qdfl3va"; depends=[matrixStats permute]; }; + ClassifyR = derive2 { name="ClassifyR"; version="2.1.32"; sha256="1v82c9s3g7j6da528571nsw1d4yjl502zw5q7zfjdd23nz6kppzz"; depends=[BiocParallel locfit MultiAssayExperiment plyr S4Vectors]; }; + Clomial = derive2 { name="Clomial"; version="1.17.4"; sha256="0w0qnl7ihmkgl568wimx13cc4lhpxb1ll68iwkibnihz604rcnq6"; depends=[matrixStats permute]; }; Clonality = derive2 { name="Clonality"; version="1.29.0"; sha256="0hlrj9rl7d0wzyk6a95p68gx76m34bfgxvpz68r3qhdzi0z0lxbn"; depends=[DNAcopy]; }; ClusterJudge = derive2 { name="ClusterJudge"; version="1.3.0"; sha256="1zc019s15skjnzjm0vb5y3z4rd5cnk1awnvwxwj062y3pzr5kp62"; depends=[httr infotheo jsonlite lattice latticeExtra]; }; - ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.9.0"; sha256="18j2jscwgmv2hcsi00182n03rvcqyaxbazzplxx5jqrgmqqzngmz"; depends=[pracma princurve RColorBrewer scatterplot3d]; }; + ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.9.2"; sha256="13mgd8sxj65f7lv4jlbslq27zj3hsqd57fg34xkrvgvir2a7jcmp"; depends=[pracma princurve RColorBrewer scatterplot3d]; }; CoCiteStats = derive2 { name="CoCiteStats"; version="1.53.0"; sha256="0xy1zy4951r9xpjmhia8krrc429azbfg22nqzd9p0jcqflfj2sq7"; depends=[AnnotationDbi org_Hs_eg_db]; }; - CoGAPS = derive2 { name="CoGAPS"; version="3.1.0"; sha256="1ra3p9dqgpyfn3f4jq0jhamiiais0y2pli4qpyq3k3x510810mkd"; depends=[BH cluster doParallel foreach ggplot2 gplots RColorBrewer Rcpp reshape2 shiny]; }; - CoRegNet = derive2 { name="CoRegNet"; version="1.19.0"; sha256="1m532i7r1bz3dg5p2h8cfgligds95v6a57kv0xzan1gn37pys9g1"; depends=[arules igraph shiny]; }; + CoGAPS = derive2 { name="CoGAPS"; version="3.1.6"; sha256="15x5pp83i1wzzs5h9gdllzb4qffi6ciw1kf63h1x6b42sk37kzia"; depends=[BH cluster doParallel foreach ggplot2 gplots RColorBrewer Rcpp reshape2 shiny]; }; + CoRegNet = derive2 { name="CoRegNet"; version="1.19.1"; sha256="0ywa8d80vgk222161ks0mgxi0ahswm3mil0lxgxanny8ad1vxvx2"; depends=[arules igraph shiny]; }; CompGO = derive2 { name="CompGO"; version="1.17.0"; sha256="04f22n17b4cyv1mapimkmc913d22cpvifdznfgqgbmrkjsyygg2k"; depends=[GenomicFeatures ggplot2 pathview pcaMethods RDAVIDWebService reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="1.19.1"; sha256="1wdbffj94jycbg95gpj8c5bdll2697v9rhqanv075373qa8f1miq"; depends=[circlize colorspace GetoptLong GlobalOptions RColorBrewer]; }; + ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="1.19.3"; sha256="1pczcx26i30izg7iwi7ljnwqzf2k8mfw09dhmgbrcvy5siv7vn03"; depends=[circlize colorspace GetoptLong GlobalOptions RColorBrewer]; }; ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.45.0"; sha256="1ypfclg252j9d7v78r81n14f0gsaxgzk6n1509rdv010h0xbaw2q"; depends=[ALL Biobase cluster]; }; - CopywriteR = derive2 { name="CopywriteR"; version="2.13.0"; sha256="11gls7dh4n4kd6dijvly5r3x918ivbpyriyz0y50333vpafm4swr"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; }; + CopywriteR = derive2 { name="CopywriteR"; version="2.13.1"; sha256="1w3raf6756lnf1fmarcwsr10808ggih71v0gzky4xcbhgy5d9dkh"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; }; CorMut = derive2 { name="CorMut"; version="1.23.0"; sha256="0y0sbnz3rlv98b87i7qcqv7zy1js180hmpy45fw55kmzjvd4j6vq"; depends=[igraph seqinr]; }; Cormotif = derive2 { name="Cormotif"; version="1.27.0"; sha256="0spl1qg0p8za8w6ikiwsf4d1spx55g1b73vcbpxbipmjymwc408i"; depends=[affy limma]; }; - CountClust = derive2 { name="CountClust"; version="1.9.0"; sha256="12f2bazvyz0xvd9a67qxwii30441nsnmxd89706h4k1ba1zgp436"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam SQUAREM]; }; + CountClust = derive2 { name="CountClust"; version="1.9.1"; sha256="06vqcmb53h7h329kvq51gka8gzbz811wnrbi92wr9p0vy2pwm3hy"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam SQUAREM]; }; CoverageView = derive2 { name="CoverageView"; version="1.19.0"; sha256="0alj0908pfih5z5zyi5szkimcm73sfsbqwpg6w594iglgyvbfbck"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; }; - CrispRVariants = derive2 { name="CrispRVariants"; version="1.9.0"; sha256="18ww7xjykyrn0fh07b341pzg7zypd4hmq2adpn6m331v7v91m3dw"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; }; - CytoDx = derive2 { name="CytoDx"; version="1.1.0"; sha256="02zh10icpc0iv0bcyayr6bcvbjsvgbq9whg7mnlqlnf8x4hx6mk2"; depends=[doParallel dplyr flowCore glmnet rpart rpart_plot]; }; - CytoML = derive2 { name="CytoML"; version="1.7.7"; sha256="0qr52pq6l04w2y0dqkh3vmyyxjd3jc0yh8yvx1hxy2yglvdb9mpw"; depends=[base64enc Biobase data_table flowCore flowUtils flowWorkspace ggcyto graph jsonlite ncdfFlow openCyto plyr RBGL Rgraphviz XML]; }; - DAPAR = derive2 { name="DAPAR"; version="1.13.0"; sha256="1qv5hgwcxpxjy5p0rbsr12wcplqvhyr2qwa1yr26ga7wqspbqg5g"; depends=[AnnotationDbi Cairo clusterProfiler cp4p DAPARdata doParallel dplyr foreach ggplot2 gplots graph highcharter imp4p impute imputeLCMD knitr lattice limma lme4 Matrix MSnbase norm openxlsx pcaMethods png preprocessCore RColorBrewer readxl reshape2 scales siggenes stringr tidyr tidyverse tmvtnorm vioplot]; }; + CrispRVariants = derive2 { name="CrispRVariants"; version="1.9.2"; sha256="09ilj21fr59kw51msyazl3lcypla5dd0sc3z60jrr4ygs3fyw91q"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; }; + CytoDx = derive2 { name="CytoDx"; version="1.1.2"; sha256="1d2kdsiarfz9hpr87qq94ybiyg8cg40j6p2pryw6qnkkj43qdmgj"; depends=[doParallel dplyr flowCore glmnet rpart rpart_plot]; }; + CytoML = derive2 { name="CytoML"; version="1.7.14"; sha256="0xflcjjzigq08xpjjsyz67v80x0qmxnrkjq9h4241f7s0vxx7pl2"; depends=[base64enc Biobase data_table flowCore flowUtils flowWorkspace ggcyto graph jsonlite ncdfFlow openCyto plyr RBGL Rgraphviz XML]; }; + DAPAR = derive2 { name="DAPAR"; version="1.13.15"; sha256="1yxkipp01zdx5xlj479a6f2hzrhs72fh8qyk5b5nbqvbrb2jipfh"; depends=[AnnotationDbi Cairo clusterProfiler cp4p DAPARdata doParallel dplyr factoextra FactoMineR foreach ggplot2 gplots graph highcharter imp4p impute knitr lattice limma lme4 Matrix MSnbase norm openxlsx pcaMethods png preprocessCore RColorBrewer readxl reshape2 scales siggenes stringr tidyr tidyverse tmvtnorm vioplot vsn]; }; DART = derive2 { name="DART"; version="1.29.0"; sha256="1akgln0w3xbvis0pcgjdm07jbbfsg0yn732gkvh1hzkpg26iwgfr"; depends=[igraph]; }; DBChIP = derive2 { name="DBChIP"; version="1.25.0"; sha256="1c3s5ffbdbhsr35q5mxs1vhl3glrjfwnpng11xlrcsj9h3jpxhva"; depends=[DESeq edgeR]; }; - DChIPRep = derive2 { name="DChIPRep"; version="1.11.0"; sha256="00r70fvr49fy4xmyyspgwiqphz96xcq9pz5c0srprrf4az71fl96"; depends=[assertthat ChIPpeakAnno DESeq2 fdrtool GenomicRanges ggplot2 plyr purrr reshape2 S4Vectors smoothmest soGGi SummarizedExperiment tidyr]; }; - DECIPHER = derive2 { name="DECIPHER"; version="2.9.1"; sha256="1b09amzwvchh56wy0bs2f6hgjrsa09hdpqql6ywkj7n7abg022vf"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; }; - DEComplexDisease = derive2 { name="DEComplexDisease"; version="1.1.0"; sha256="0swqxmyqlh05albirm8n32wl31s4gbv45qn9c5mpdpvr6zsldylg"; depends=[BiocParallel ComplexHeatmap DESeq2 edgeR Rcpp SummarizedExperiment]; }; + DChIPRep = derive2 { name="DChIPRep"; version="1.11.1"; sha256="1kp0lsqlrnr815rp0g7jcppbrp1h62pa60j1jgav78bwh51l4dpq"; depends=[assertthat ChIPpeakAnno DESeq2 fdrtool GenomicRanges ggplot2 plyr purrr reshape2 S4Vectors smoothmest soGGi SummarizedExperiment tidyr]; }; + DECIPHER = derive2 { name="DECIPHER"; version="2.9.2"; sha256="0lvg0kcv6rryb39aini5s9b4aacbld67z7427w9gvpsj7zcapgvz"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; }; + DEComplexDisease = derive2 { name="DEComplexDisease"; version="1.1.1"; sha256="007wgj3kpdk7nvx8qribm6vqfca4vp7n1ih8y866xlqgdcr5ad61"; depends=[BiocParallel ComplexHeatmap DESeq2 edgeR Rcpp SummarizedExperiment]; }; DEDS = derive2 { name="DEDS"; version="1.55.0"; sha256="0823ycm0j30dh1pbpxbcfwqglpff72675cr4h18rk0fx0v742vhy"; depends=[]; }; - DEFormats = derive2 { name="DEFormats"; version="1.9.0"; sha256="1vd3dnc38mmgkw07qbazra8928c6r8wcxcizq05bwgjqhwfjdyxs"; depends=[checkmate data_table DESeq2 edgeR GenomicRanges S4Vectors SummarizedExperiment]; }; - DEGraph = derive2 { name="DEGraph"; version="1.33.0"; sha256="1xmawr15c8nxw8hgh3ijq2cp6ynkb8xana6zfidcibwmgfs7zlw6"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; }; - DEGreport = derive2 { name="DEGreport"; version="1.17.2"; sha256="1zf1fryw0h1kh8hwi0v6xkvr22gi7qbynn1j2fmx9n5n2246n3ad"; depends=[Biobase BiocGenerics circlize cluster ComplexHeatmap ConsensusClusterPlus cowplot DESeq2 dplyr edgeR ggdendro ggplot2 ggrepel knitr logging magrittr Nozzle_R1 psych RColorBrewer reshape rlang S4Vectors scales stringr SummarizedExperiment tibble tidyr]; }; - DEGseq = derive2 { name="DEGseq"; version="1.35.0"; sha256="0kynaqbzlsldxjkqxd396xs5gfzmkvrkxhn14ihv651iviarwb8b"; depends=[qvalue samr]; }; - DEP = derive2 { name="DEP"; version="1.3.2"; sha256="0yy70j6ng0cdg16s3nmly2447857h0ks71q16c7vp2xgxjlqbipd"; depends=[assertthat circlize cluster ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; }; + DEFormats = derive2 { name="DEFormats"; version="1.9.1"; sha256="1hcxamc82wyp8xgrx4mxhw3q15g32y8z66qgv1gbm7h17wykssih"; depends=[checkmate data_table DESeq2 edgeR GenomicRanges S4Vectors SummarizedExperiment]; }; + DEGraph = derive2 { name="DEGraph"; version="1.33.1"; sha256="19fcsjz6bgc1bvnympvq0ms5d7mvj2681jbnq5inrr4pxq2qz0p0"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; }; + DEGreport = derive2 { name="DEGreport"; version="1.17.8"; sha256="02z93g0fy594dhj7dk16fglw4jakyb44zcn22k1c64d8wvhq8rfa"; depends=[Biobase BiocGenerics broom circlize cluster ComplexHeatmap ConsensusClusterPlus cowplot DESeq2 dplyr edgeR ggdendro ggplot2 ggrepel knitr lasso2 logging magrittr Nozzle_R1 psych RColorBrewer reshape rlang S4Vectors scales stringr SummarizedExperiment tibble tidyr]; }; + DEGseq = derive2 { name="DEGseq"; version="1.35.1"; sha256="1mb9chwazmsj9j4dz92kw2mhc3b5lx5v2y3xgdcc9s4bjmb21xrz"; depends=[qvalue]; }; + DEP = derive2 { name="DEP"; version="1.3.3"; sha256="0wmzinv369svfwfmgv2gsz471bnh5vz77p5w1q4ycgd6lj5l2ckn"; depends=[assertthat circlize cluster ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; }; DEScan2 = derive2 { name="DEScan2"; version="1.1.2"; sha256="04xla8cr3f3r1dwvahs55l93bzlnds04c42kx93lgyn5r2ksqr8n"; depends=[BiocGenerics BiocParallel ChIPpeakAnno data_table DelayedArray GenomeInfoDb GenomicAlignments GenomicRanges glue IRanges plyr Rcpp RcppArmadillo rtracklayer S4Vectors SummarizedExperiment]; }; DESeq = derive2 { name="DESeq"; version="1.33.0"; sha256="1h56v3d1kj8inh3xy08k6kfc31czyq9a2zwy1v2kibcaa79z4zrn"; depends=[Biobase BiocGenerics genefilter geneplotter lattice locfit MASS RColorBrewer]; }; - DESeq2 = derive2 { name="DESeq2"; version="1.21.6"; sha256="02libh2lsna118na2lbc8hmd11dm9lia6gcnb59jqp69w9mmmpyk"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 Hmisc IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; - DEXSeq = derive2 { name="DEXSeq"; version="1.27.0"; sha256="113dircdkngrrsb50mk3pp4x4nis2b27j020blxra3i9n3g2zrq7"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; - DEsingle = derive2 { name="DEsingle"; version="1.1.4"; sha256="0nzm9nw9rqmk13vz7vyqjiy096m1vka51pqrs830yyf4vq69g457"; depends=[bbmle BiocParallel gamlss MASS Matrix maxLik pscl VGAM]; }; - DEsubs = derive2 { name="DEsubs"; version="1.7.1"; sha256="0wj89308s4rq2d1i1f6y79wj2fpk0gk2gzpfam0x5pfppzz83cx8"; depends=[circlize DESeq DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL samr]; }; + DESeq2 = derive2 { name="DESeq2"; version="1.21.25"; sha256="1ll8fdpqyml171vsxsnggsx09963jz15rivvn32xihwas9dxwksv"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 Hmisc IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; }; + DEXSeq = derive2 { name="DEXSeq"; version="1.27.1"; sha256="0jppj3yl1jibxj2ci07sf4lbbx9rbjlx172ynp2vg3ic7j7y6z61"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; }; + DEqMS = derive2 { name="DEqMS"; version="0.99.44"; sha256="01754m7rwrc1in1ls8vd0c94p2p4jyspb0nwx42scb8kjpnmcbdq"; depends=[ggplot2 limma]; }; + DEsingle = derive2 { name="DEsingle"; version="1.1.5"; sha256="0biail9qfp0sp7f2sp4mx55ajba2waqsfllx2sndjls0673pv215"; depends=[bbmle BiocParallel gamlss MASS Matrix maxLik pscl VGAM]; }; + DEsubs = derive2 { name="DEsubs"; version="1.7.4"; sha256="0v4yd63zzd0k7y19pcx5mb7iq17dijjldf64c6nwlf69d8gv5lp9"; depends=[circlize DESeq DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL]; }; DFP = derive2 { name="DFP"; version="1.39.0"; sha256="10yamzm28gnayrjc58jvj6mjg2j6gr266f65i9rrz5shnz9244wl"; depends=[Biobase]; }; - DMCHMM = derive2 { name="DMCHMM"; version="1.3.0"; sha256="0076i6d9qpphbxrkz0maqi6qsviix0sxckz6hg5mwrymsawssh48"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; }; - DMRScan = derive2 { name="DMRScan"; version="1.7.4"; sha256="1gdnn3kzlfhj3vp4j1r7q8ggfqq5jmcx1jyrpd8wc9pn0nhnamiv"; depends=[GenomeInfoDb GenomicRanges IRanges MASS Matrix mvtnorm RcppRoll]; }; - DMRcaller = derive2 { name="DMRcaller"; version="1.13.1"; sha256="01ip1xgyr1jjmrg85agbxxg4b6ihy9jkxfrf1hjkpmi1qkzw8pxz"; depends=[betareg GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; }; - DMRcate = derive2 { name="DMRcate"; version="1.17.0"; sha256="19k6cl4a154hgasqk3nycb0wxra0yg1nvn3ywbsikn17pa6qiyzc"; depends=[DMRcatedata DSS GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors]; }; + DMCHMM = derive2 { name="DMCHMM"; version="1.3.1"; sha256="01r9kzyjsk43ncw7xbr95r4apxchpkfjl4qilxvgsq8icg0mhqx4"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; }; + DMRScan = derive2 { name="DMRScan"; version="1.7.5"; sha256="1x6nv3688p4lh8bsv3brg35xpn4pk6i1fks2zfdfspvagbq4bqvp"; depends=[GenomeInfoDb GenomicRanges IRanges MASS Matrix mvtnorm RcppRoll]; }; + DMRcaller = derive2 { name="DMRcaller"; version="1.13.8"; sha256="0lp27mbx6sqh4b7fwsbm0gxk5ng9qabdimxhw4f8dqhsza6mp73p"; depends=[betareg GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; }; + DMRcate = derive2 { name="DMRcate"; version="1.17.6"; sha256="0ynh5q7shl6as7vafg0z7z4ld2ikk785vhw656viipix4q71k1iv"; depends=[DMRcatedata DSS GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors]; }; DMRforPairs = derive2 { name="DMRforPairs"; version="1.17.0"; sha256="0094pw863dnc57kfif490fabcsggplfdr5xh41asldydp2x1pwcy"; depends=[GenomicRanges Gviz R2HTML]; }; DNABarcodes = derive2 { name="DNABarcodes"; version="1.11.0"; sha256="1hpsdybpj3dszjxvlh7x2j5xdrgyhx03sv15hlg2bn4jj6am4iiy"; depends=[BH Matrix Rcpp]; }; DNAcopy = derive2 { name="DNAcopy"; version="1.55.0"; sha256="1bmd22nmfbrcwvz9qk6rh4f81faxh7f71fk2pgvgdcz97kzl4g8w"; depends=[]; }; - DNAshapeR = derive2 { name="DNAshapeR"; version="1.9.5"; sha256="1am9mcfr1fab29p06ppyl74qsdpvbq716vbys0dx8r9j1bf7x36x"; depends=[Biostrings fields GenomicRanges Rcpp]; }; + DNAshapeR = derive2 { name="DNAshapeR"; version="1.9.6"; sha256="1v29k18l3wqrnhfzgj3lff5pzzgwn5n9956xlx94nbblh01x96lc"; depends=[Biostrings fields GenomicRanges Rcpp]; }; + DOQTL = derive2 { name="DOQTL"; version="1.17.5"; sha256="1z1qbzg0fw6ygskk1p339dlkmbm6nj8wmwng9izhmipfn6jpfzfv"; depends=[annotate annotationTools Biobase BiocGenerics biomaRt BSgenome_Mmusculus_UCSC_mm10 corpcor doParallel foreach fpc GenomicRanges hwriter IRanges iterators mclust QTLRel regress rhdf5 Rsamtools RUnit VariantAnnotation XML]; }; DOSE = derive2 { name="DOSE"; version="3.7.1"; sha256="0dldsqs807hgnfx59vl1q90hh1lv9x2dbxndbfi97yvzlkhnar55"; depends=[AnnotationDbi BiocParallel DO_db fgsea ggplot2 GOSemSim qvalue reshape2 S4Vectors]; }; - DRIMSeq = derive2 { name="DRIMSeq"; version="1.9.0"; sha256="1q3zff7wrk9hflz1jzrs1g0pacsv62rgif0bhglsk1877iqj8nip"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges limma MASS reshape2 S4Vectors]; }; + DRIMSeq = derive2 { name="DRIMSeq"; version="1.9.2"; sha256="0kpfvphzighq7iryxbn7s6v7k3mi09cv49r2c9gsyklqypv5cvsq"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges limma MASS reshape2 S4Vectors]; }; DSS = derive2 { name="DSS"; version="2.29.0"; sha256="1jwjyfx1356j0jxryf8f3mnl764fd5bz5p395z6ax8xsafzkabq1"; depends=[Biobase bsseq DelayedArray]; }; DTA = derive2 { name="DTA"; version="2.27.0"; sha256="129hvbvdgq7whh1f63gdh28w0g5avl3xqwvjm61makyyqyx47ipf"; depends=[LSD scatterplot3d]; }; - DaMiRseq = derive2 { name="DaMiRseq"; version="1.5.1"; sha256="0zli040zjbgphlg2f0bxcb69nlhzzfzjr91cs8999p8hb80dml7l"; depends=[arm caret corrplot DESeq2 e1071 EDASeq FactoMineR FSelector ggplot2 Hmisc ineq kknn limma lubridate MASS pheatmap pls plsVarSel randomForest RColorBrewer reshape2 RSNNS SummarizedExperiment sva]; }; - DeMAND = derive2 { name="DeMAND"; version="1.11.0"; sha256="1fmswncd9jp49ni7rpg7xkcrnz2nh58xj9nyig1098hib00y70ml"; depends=[KernSmooth]; }; + DaMiRseq = derive2 { name="DaMiRseq"; version="1.5.3"; sha256="0zxw6ls834cizk6nw8kpbi7p9c2xr2s0892qmizzqbgag8d0mjif"; depends=[arm caret corrplot DESeq2 e1071 EDASeq edgeR FactoMineR FSelector ggplot2 Hmisc ineq kknn limma lubridate MASS pheatmap pls plsVarSel randomForest RColorBrewer reshape2 RSNNS SummarizedExperiment sva]; }; + DeMAND = derive2 { name="DeMAND"; version="1.11.1"; sha256="00rbd5mwrh9g2ppx0z0kaf1245l7r5rgiyzhrhkrkp6vvbjrhd4i"; depends=[KernSmooth]; }; DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.23.0"; sha256="0hnnw6k246a0dsj0ppfrj40ddrl3czpdq28gvkahyig64ljwfrbm"; depends=[ggplot2 limSolve pcaMethods]; }; DeepBlueR = derive2 { name="DeepBlueR"; version="1.7.0"; sha256="198apfr10nfnk82zhmsnk9vpq2ykfi6yh79gwdnnkls8h2r5nqz9"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; }; - DelayedArray = derive2 { name="DelayedArray"; version="0.7.18"; sha256="1a2a558xc638prbb96xfkd97m40cf3hdv3g40r8a1xfw0vk9669k"; depends=[BiocGenerics BiocParallel IRanges matrixStats S4Vectors]; }; - DelayedMatrixStats = derive2 { name="DelayedMatrixStats"; version="1.3.4"; sha256="12ljlbk01p9cv8vwjapq1nknvsqf3qp44qh4yyq1j5cr8l8rg2xx"; depends=[DelayedArray IRanges Matrix matrixStats S4Vectors]; }; + DelayedArray = derive2 { name="DelayedArray"; version="0.7.49"; sha256="0nkpnxa91prhfnd0dwfmfr0g3r8i93gy6xcw403s81zw74imn1jk"; depends=[BiocGenerics BiocParallel IRanges matrixStats S4Vectors]; }; + DelayedMatrixStats = derive2 { name="DelayedMatrixStats"; version="1.3.11"; sha256="0m3dx01ibmxqn4syv5cw88m7b30qlby6fiwjhd3927zmfi3jwl2s"; depends=[BiocParallel DelayedArray HDF5Array IRanges Matrix matrixStats S4Vectors]; }; DiffBind = derive2 { name="DiffBind"; version="2.9.0"; sha256="0ka72zizphm2sphr8gm53602wgm7rkfc6hx0fql3cb34yjg11wi1"; depends=[amap BiocParallel DESeq2 dplyr edgeR GenomicAlignments GenomicRanges ggplot2 ggrepel gplots IRanges lattice limma locfit RColorBrewer Rcpp Rsamtools S4Vectors SummarizedExperiment systemPipeR zlibbioc]; }; DiffLogo = derive2 { name="DiffLogo"; version="2.5.0"; sha256="00vk5qj0byh8ggg5nmaa94ddbi42rl59y049bxx37qr98qyw79yj"; depends=[cba]; }; - Director = derive2 { name="Director"; version="1.7.0"; sha256="0xd8fviwd59smfzvrvwszpv69a74606w8iwds9gq8yi8s38288bs"; depends=[htmltools]; }; + Director = derive2 { name="Director"; version="1.7.3"; sha256="1yin749xl3v3h01gccvlgkb91l2dn1rkm7asb3q9bxnr389sm4yr"; depends=[htmltools]; }; DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.23.0"; sha256="1wxb094p90628bbkm4vzjrpxcagcpm17iqa0f1hjfy7b8a1my9wh"; depends=[BiocGenerics IRanges S4Vectors]; }; - DominoEffect = derive2 { name="DominoEffect"; version="1.1.0"; sha256="1n2hr24izsd3zvxc795zw7678kwz4glaz09r49s0wr1lp70rgzb0"; depends=[AnnotationDbi biomaRt Biostrings data_table GenomeInfoDb GenomicRanges IRanges SummarizedExperiment VariantAnnotation]; }; + DominoEffect = derive2 { name="DominoEffect"; version="1.1.2"; sha256="1ri0224my8imjjd95ccdg3gmpq4npji67f01skvycn7j2z5illq8"; depends=[AnnotationDbi biomaRt Biostrings data_table GenomeInfoDb GenomicRanges IRanges SummarizedExperiment VariantAnnotation]; }; Doscheda = derive2 { name="Doscheda"; version="1.3.0"; sha256="1yfywqzxjj88wwnwmrm3yd9z1al74w2xzijzk1zqdjy5lg8vc1qn"; depends=[affy calibrate corrgram d3heatmap drc DT ggplot2 gridExtra httr jsonlite limma matrixStats prodlim readxl reshape2 shiny shinydashboard stringr vsn]; }; DriverNet = derive2 { name="DriverNet"; version="1.21.0"; sha256="0ja7jpnh2rh4gkcv0h99mma19rk07y1vmh4hpkyxg1m1mb1q4vyv"; depends=[]; }; - DropletUtils = derive2 { name="DropletUtils"; version="1.1.5"; sha256="1yq3ijm3g71gh9gp72lwr7dzq395j548xvp11vrn0bp867rx4b5s"; depends=[beachmat BiocParallel edgeR Matrix Rcpp rhdf5 Rhdf5lib S4Vectors SingleCellExperiment]; }; + DropletUtils = derive2 { name="DropletUtils"; version="1.1.13"; sha256="1qpds9drjvxwjdlv844lsv081iyp4syzvhpkm90skd5wpsfiriy7"; depends=[beachmat BiocParallel edgeR HDF5Array Matrix Rcpp rhdf5 Rhdf5lib S4Vectors SingleCellExperiment]; }; DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.23.0"; sha256="01hrd65q8h9r09y91vnl7x8gczgi3q8vlxihyingxjdc09qn86xd"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; }; - DupChecker = derive2 { name="DupChecker"; version="1.19.0"; sha256="03bfyg1h08ya41svmvnyd0mxs4qakrk7xwpyv2m51cn3rk2cgacl"; depends=[R_utils RCurl]; }; + DupChecker = derive2 { name="DupChecker"; version="1.19.1"; sha256="0a8vaamkpqwir3w3clfihpwcbjfmaaccwb86b6i6lydglkbdhnpq"; depends=[R_utils RCurl]; }; DynDoc = derive2 { name="DynDoc"; version="1.59.0"; sha256="1cdyv6ylgdz7fyj8dnndy5y0khg0na8r7sss5p1pja73idxdqpvf"; depends=[]; }; - EBImage = derive2 { name="EBImage"; version="4.23.0"; sha256="1v9lnyc5x3xwrabqgr4l9mx67bgwbq4gyyimq87pm1id5p3vpb9d"; depends=[abind BiocGenerics fftwtools htmltools htmlwidgets jpeg locfit png RCurl tiff]; }; + EBImage = derive2 { name="EBImage"; version="4.23.2"; sha256="0q91m78i1s5ds5971rbdgrlv6d4mj30ljssbg75gw1gxzhlhaczg"; depends=[abind BiocGenerics fftwtools htmltools htmlwidgets jpeg locfit png RCurl tiff]; }; EBSEA = derive2 { name="EBSEA"; version="1.9.0"; sha256="14bgrkfx93gcr0j9fj48krnfvhnbjxnqanvnx85n5x48bk40s2jr"; depends=[edgeR limma plyr]; }; EBSeq = derive2 { name="EBSeq"; version="1.21.0"; sha256="0nbw3mkqgify3yijwizdznafvfyd4qizfqaj5f3w04nx0h8m8b2h"; depends=[blockmodeling gplots testthat]; }; EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.15.0"; sha256="067fi2vy35y3n6a5264a7af3j03jg46fp7vzl80ca7x8vqji4xvy"; depends=[EBSeq]; }; EBarrays = derive2 { name="EBarrays"; version="2.45.0"; sha256="1wvim2qldy74qccgqkj6hwqxjhwm3sgj2gsr88qqh16gvfqy1w9z"; depends=[Biobase cluster lattice]; }; EBcoexpress = derive2 { name="EBcoexpress"; version="1.25.0"; sha256="1xpihh3pxm492kqrf7pnz6sarz98hqhrgw3ybicja3cvn5ihlk1j"; depends=[EBarrays mclust minqa]; }; - EDASeq = derive2 { name="EDASeq"; version="2.15.2"; sha256="1d7dq3fl9qmv5bll4vkbj4zvd9md44grpr4vdxk29wcjm6dzjyma"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DESeq GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; }; - EDDA = derive2 { name="EDDA"; version="1.19.0"; sha256="1q15lj4sa76yhjgyzng1sr60aa1dbfyw51dphvg7n1c1jngqib0n"; depends=[baySeq DESeq edgeR Rcpp ROCR snow]; }; - EGAD = derive2 { name="EGAD"; version="1.9.0"; sha256="1k1bv3z5dvgiid0vdfc3kkx9b37qbafybqxvdc188685nfkkkr03"; depends=[affy arrayQualityMetrics Biobase GEOquery gplots igraph impute limma MASS Matrix plyr RColorBrewer RCurl zoo]; }; - EGSEA = derive2 { name="EGSEA"; version="1.9.0"; sha256="1qasrnfmrnvk05v4w4yyj0wyp02jcg0ww8svjnmhhlqpyj256s99"; depends=[AnnotationDbi Biobase DT edgeR EGSEAdata gage ggplot2 Glimma globaltest gplots GSVA HTMLUtils htmlwidgets hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview plotly RColorBrewer safe stringi topGO]; }; - ELBOW = derive2 { name="ELBOW"; version="1.17.0"; sha256="0g4ss21apdp6zsg70fl79f2xz4gwdl0ygyp03a636xpg2y6hbrx3"; depends=[]; }; - ELMER = derive2 { name="ELMER"; version="2.5.4"; sha256="0qzivgb21y1g7y7j7dm0y2w7w2wdvxsfxblp8q21rh5z1wxr696x"; depends=[biomaRt circlize ComplexHeatmap doParallel downloader dplyr ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel gridExtra Gviz IRanges lattice magrittr Matrix MultiAssayExperiment plotly plyr readr reshape rmarkdown rvest S4Vectors stringr SummarizedExperiment TCGAbiolinks xml2]; }; + EDASeq = derive2 { name="EDASeq"; version="2.15.4"; sha256="0lsp0cgix7qkqry6hk2a6wqp8cfqcr3apdsi31jgjnxqz7fn7jlj"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics biomaRt Biostrings DESeq GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; }; + EDDA = derive2 { name="EDDA"; version="1.19.1"; sha256="0cs962g60shzywbp4q33hxv03qwrkr6cn12c63i8wfp49kz1g7h1"; depends=[baySeq DESeq edgeR Rcpp ROCR snow]; }; + EGAD = derive2 { name="EGAD"; version="1.9.2"; sha256="0xb1lcrzivadfnwl2v0x0aldsqzilcg7ygy6mizbijpfr79g8y42"; depends=[affy arrayQualityMetrics Biobase GEOquery gplots igraph impute limma MASS Matrix plyr RColorBrewer RCurl zoo]; }; + EGSEA = derive2 { name="EGSEA"; version="1.9.2"; sha256="1mphjnwvwnphq2iby76w49rlwflxvhm72488gv0ls5pyvvj68r32"; depends=[AnnotationDbi Biobase DT edgeR EGSEAdata gage ggplot2 Glimma globaltest gplots GSVA HTMLUtils htmlwidgets hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview plotly RColorBrewer safe stringi topGO]; }; + ELBOW = derive2 { name="ELBOW"; version="1.17.1"; sha256="1wz4msw03g9c6732zciqpcabq8q3arxng5cbzpfgym22n0gsri82"; depends=[]; }; + ELMER = derive2 { name="ELMER"; version="2.5.7"; sha256="0a987d542rgydny6fwpvgrhjr0729b8mpr2nyv3j7ic65c1hzibf"; depends=[biomaRt circlize ComplexHeatmap doParallel downloader dplyr ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel gridExtra Gviz IRanges lattice magrittr Matrix MultiAssayExperiment plotly plyr readr reshape rmarkdown rvest S4Vectors stringr SummarizedExperiment TCGAbiolinks xml2]; }; EMDomics = derive2 { name="EMDomics"; version="2.11.0"; sha256="0snk2fcikj34s2hhfg9i5di92nd8lbg26ypvc1b1zcf7rj5yy07p"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; }; ENCODExplorer = derive2 { name="ENCODExplorer"; version="2.7.0"; sha256="01sjpf4s0gdsiv6pqjmh0jq582wax9za47qf619igyzhwy2crvp1"; depends=[data_table dplyr DT jsonlite RCurl shiny shinythemes stringi stringr tidyr]; }; ENVISIONQuery = derive2 { name="ENVISIONQuery"; version="1.29.0"; sha256="1pj6r1sb3izyr2ilv95j3nl92297zxiypjipl1x3nrqpnjn7k032"; depends=[rJava XML]; }; ENmix = derive2 { name="ENmix"; version="1.17.0"; sha256="0hk2qj8y976ybz2pxj5ldnr13z3l64s8z7na18ry85yvbv90xzs3"; depends=[doParallel foreach geneplotter impute MASS minfi preprocessCore SummarizedExperiment sva wateRmelon]; }; + ERSSA = derive2 { name="ERSSA"; version="0.99.8"; sha256="0l56mvag5y1svm18l093037ilarna51zz56bxnbidzgvqgw1cdfc"; depends=[BiocParallel DESeq2 edgeR ggplot2 plyr RColorBrewer]; }; EasyqpcR = derive2 { name="EasyqpcR"; version="1.23.2"; sha256="1fdfhclpyv6ls6misnwa4kvm9qlgnv65pqg58q2rqd2w012kic02"; depends=[gWidgetsRGtk2 matrixStats plotrix plyr]; }; EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.9.0"; sha256="131xg14zp0kqxwk1y2yfxb0sysf4ad97klrgsrnqkdbvjfz8wfa0"; depends=[]; }; - EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.11.2"; sha256="1rfls2xz7v7bj27f07rzvlq4d12ajzbcpza11wq6jy73snvb29p4"; depends=[circlize ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; }; - EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.11.4"; sha256="0lwlwpm1rjycj8nwiyiiv061bhchgvk231l3l4wrw3x1zif7rwhc"; depends=[AnnotationDbi BiocFileCache biocGraph ComplexHeatmap DESeq2 EDASeq edgeR geneplotter GO_db graph graphite GSEABase hwriter KEGGgraph KEGGREST limma MASS pathview rappdirs ReportingTools Rgraphviz S4Vectors safe SPIA SummarizedExperiment topGO]; }; + EnhancedVolcano = derive2 { name="EnhancedVolcano"; version="0.99.16"; sha256="0r5v611wckw7i6qyd5zhdi7m98hqvypn3zxqy4gbis2khmblnhq0"; depends=[ggplot2 ggrepel]; }; + EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.11.3"; sha256="1y0w504rvh9zrr8dr57zdrlm8pjv34jcvlvd8d20f11yxc9c82yx"; depends=[circlize ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; }; + EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.11.19"; sha256="15jcfandrlihhiw12w4akdhavr8z1pkg9cd6jb5n88dhm4hb7f72"; depends=[AnnotationDbi BiocFileCache biocGraph BiocManager ComplexHeatmap DESeq2 EDASeq edgeR geneplotter GO_db graph graphite GSEABase hwriter KEGGgraph KEGGREST limma MASS pathview rappdirs ReportingTools Rgraphviz S4Vectors safe SPIA SummarizedExperiment topGO]; }; EpiDISH = derive2 { name="EpiDISH"; version="1.3.0"; sha256="07ln6hyq2lfil1xwackvhb2biay3ig6bvsyf2ll5n3glk938x02d"; depends=[e1071 MASS quadprog]; }; - EventPointer = derive2 { name="EventPointer"; version="1.5.0"; sha256="1fa6xq8kwwbp39whm2xp8si3kz5hfpndlga8mf2jjlj2gd3nf3xj"; depends=[affxparser doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges graph igraph limma MASS Matrix matrixStats nnls prodlim RBGL S4Vectors SGSeq stringr SummarizedExperiment]; }; + EventPointer = derive2 { name="EventPointer"; version="1.99.3"; sha256="01fbip59zzhy5fg5vr1yw36dbfzcmfr23rfxz7f0r6ymihz892m3"; depends=[affxparser cobs doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges graph igraph IRanges limma MASS Matrix matrixStats nnls prodlim qvalue RBGL rhdf5 S4Vectors SGSeq stringr SummarizedExperiment]; }; + ExCluster = derive2 { name="ExCluster"; version="0.99.13"; sha256="1f9qw645bir2sxb3h3pzswhjm6p1fd2dlj6bmlsqlb9awxsj8r47"; depends=[GenomicRanges IRanges matrixStats Rsubread rtracklayer]; }; ExiMiR = derive2 { name="ExiMiR"; version="2.23.0"; sha256="01syzl0q719fif0pdhn31hrwpbq14idwpyppcwl0b0156aid7lwv"; depends=[affy affyio Biobase limma preprocessCore]; }; - ExperimentHub = derive2 { name="ExperimentHub"; version="1.7.1"; sha256="0jy93f8dy5mmmc0hdd97h4di4660878gfi7mhjwk7rhldrcsm8jh"; depends=[AnnotationHub BiocGenerics BiocInstaller curl S4Vectors]; }; - ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.7.0"; sha256="0gwv7zjdwhsxi992qxhds7rbha3xlqfix6cxnipx53gi72cl5plm"; depends=[AnnotationHubData BiocCheck BiocGenerics BiocInstaller curl DBI ExperimentHub httr S4Vectors]; }; + ExperimentHub = derive2 { name="ExperimentHub"; version="1.7.7"; sha256="002wzd5nll3vxncqqq95slsadj40gdj6bd59qhdhz4v6gz005h60"; depends=[AnnotationHub BiocGenerics BiocManager curl S4Vectors]; }; + ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.7.5"; sha256="1q6pc9hl5q7r8vmpk1ixb95xjh6lbikab76yhjp89xzapiprd1sl"; depends=[AnnotationHubData BiocCheck BiocGenerics BiocManager biocViews curl DBI ExperimentHub graph httr S4Vectors]; }; ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.9.1"; sha256="0pg30fbiz2q45b06p5jmav4gncbl01003m9m8lk2ifi0sxvx4jn6"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; }; ExpressionView = derive2 { name="ExpressionView"; version="1.33.0"; sha256="14h6jgdaikyjpf5bqban0ixscw3k28pczh0bsvnkhyb5916qfxch"; depends=[AnnotationDbi bitops caTools eisa GO_db isa2 KEGG_db]; }; - FELLA = derive2 { name="FELLA"; version="1.1.1"; sha256="0vqq9bzdy691c11rb2dbgvv0nwqqy8wdd397wjh991lfk3f4n3bz"; depends=[igraph KEGGREST Matrix plyr]; }; - FEM = derive2 { name="FEM"; version="3.9.0"; sha256="0nb9gp6x1crzrj9jgz7s6mq639iqp7zdf1q7qqv0ri3gcgw758jw"; depends=[AnnotationDbi BiocGenerics corrplot graph igraph impute limma marray Matrix org_Hs_eg_db]; }; + FCBF = derive2 { name="FCBF"; version="0.99.3"; sha256="0drpbnx5sampabr17rwjj7biw5bpngdmrrma2p3h5yq5llb409jr"; depends=[ggplot2 gridExtra SummarizedExperiment]; }; + FELLA = derive2 { name="FELLA"; version="1.1.6"; sha256="1d284qaz74d7lgxl3gn0c9i6a33x6j0xf9sbjbpm8bpl0kbhr0ln"; depends=[igraph KEGGREST Matrix plyr]; }; + FEM = derive2 { name="FEM"; version="3.9.2"; sha256="0nbg1rbx7gszbqf0xjibsgwapjrv8lniiv7kw0j50ppab69qxiqq"; depends=[AnnotationDbi BiocGenerics corrplot graph igraph impute limma marray Matrix org_Hs_eg_db]; }; + FGNet = derive2 { name="FGNet"; version="3.15.4"; sha256="1pnadm9c3ckdd5k9jgq3jmfny8mfc3w7j5w08vn0khnqlq9cp3x8"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; }; FISHalyseR = derive2 { name="FISHalyseR"; version="1.15.0"; sha256="0izn77dhzhsg69i893r9sy6qalw4qr120m6k5x5k6z9w01dgq47x"; depends=[abind EBImage]; }; - FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.17.0"; sha256="1m3vcffnbyf27x481gx4xmxrknb70dk0ll08zd14kfvn6lf3cgf4"; depends=[fda MASS]; }; + FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.17.1"; sha256="17qmq5mgqhfzw3v4gl9waa1ni6h8llz2hz63p3mwrx1yixinsn20"; depends=[fda MASS]; }; FamAgg = derive2 { name="FamAgg"; version="1.9.0"; sha256="1vqkaa1cpzd2cdyql66skz3jkrnp5ibdbhwipkj82dgww9zwwkbx"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; }; - FastqCleaner = derive2 { name="FastqCleaner"; version="0.99.39"; sha256="18zklgacbk8iv8i6rlmip8bcfwn9v18jpf4xb9p7pkadldphjnfc"; depends=[Biostrings DT htmltools IRanges Rcpp S4Vectors shiny shinyBS ShortRead]; }; - FindMyFriends = derive2 { name="FindMyFriends"; version="1.11.0"; sha256="0ij596qkpn4y5m9zmj6hcamrmjjm8nwqjm9d2g1wq28i5xrmra0w"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; }; - FitHiC = derive2 { name="FitHiC"; version="1.7.0"; sha256="071246cfl4iqy3nnl2c24n8sd9dkmjjj8cna74dh1km3cc6xb0vz"; depends=[data_table fdrtool Rcpp]; }; - FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.13.0"; sha256="09kqhj41w7snkr1m29wmjj4n7acy821mv8kbb49f1mljaxz0v94q"; depends=[jsonlite RCurl XML]; }; + FastqCleaner = derive2 { name="FastqCleaner"; version="0.99.40"; sha256="1hfrlr3lwcqvb1c5w6n5ffml5znjil4dchhcz4jwm2qnf6zcha0n"; depends=[Biostrings DT htmltools IRanges Rcpp S4Vectors shiny shinyBS ShortRead]; }; + FindMyFriends = derive2 { name="FindMyFriends"; version="1.11.2"; sha256="0mxpv5c2fyvcxwzaiig9qy8lg78fd8ms35nchd86nj1n4265kkx2"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; }; + FitHiC = derive2 { name="FitHiC"; version="1.7.1"; sha256="07d3lywhc665qm3kp6f89dnvjvkgsdsvqk0ms6b3w402j12jvxsb"; depends=[data_table fdrtool Rcpp]; }; + FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.13.1"; sha256="1vbc2bl5afa2zvqj8xp4ajdij44732689n1c28i1s32y92wzgjng"; depends=[jsonlite RCurl XML]; }; FlowSOM = derive2 { name="FlowSOM"; version="1.13.0"; sha256="0vw98kxlcyd9rwa2r9rgjwfp5f5pmb122w2xk1gfhsf9kqh7db7g"; depends=[BiocGenerics ConsensusClusterPlus flowCore flowUtils igraph tsne XML]; }; + FoldGO = derive2 { name="FoldGO"; version="0.99.10"; sha256="0df75rvpc0031rjrx5pwfwprm1nrli2l2yafa8jbqnycz02z0dz4"; depends=[ggplot2 tidyr topGO]; }; FourCSeq = derive2 { name="FourCSeq"; version="1.15.0"; sha256="0d8qnalv97a37l0xqxi4qi7s03zxs81122h4rw6rpi03pn5h7i10"; depends=[Biobase Biostrings DESeq2 fda GenomicAlignments GenomicRanges ggbio ggplot2 gtools LSD Matrix reshape2 Rsamtools rtracklayer SummarizedExperiment]; }; FunChIP = derive2 { name="FunChIP"; version="1.7.0"; sha256="15pfl68yynvidx9r69xxf3zavn79savabam5yjjwqq7g9yvhzjw5"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges RColorBrewer Rcpp Rsamtools shiny]; }; - FunciSNP = derive2 { name="FunciSNP"; version="1.25.0"; sha256="0dl63s5f8s82www9maf10bbmss7ddbflq820lcq1zgrfcdr9a484"; depends=[Biobase BiocGenerics ChIPpeakAnno FunciSNP_data GenomicRanges ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; + FunciSNP = derive2 { name="FunciSNP"; version="1.25.3"; sha256="0w9wqlkj52dwzrhxwq193435camj12kjv1a70rdnzdlvi3y849hm"; depends=[Biobase BiocGenerics ChIPpeakAnno FunciSNP_data GenomicRanges ggplot2 IRanges plyr reshape Rsamtools rtracklayer S4Vectors scales snpStats TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; GA4GHclient = derive2 { name="GA4GHclient"; version="1.5.0"; sha256="1bcskcxcmv47rdgrw0i8rm4cn27jqy86rx8z83qnanbzqp4g7kgg"; depends=[BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges httr IRanges jsonlite S4Vectors VariantAnnotation]; }; GA4GHshiny = derive2 { name="GA4GHshiny"; version="1.3.0"; sha256="031p9qa6cp4gxlgp8whswl7b11d24d4zl3m9fkqg3i461kjyswxj"; depends=[AnnotationDbi BiocGenerics dplyr DT GA4GHclient GenomeInfoDb GenomicFeatures openxlsx purrr S4Vectors shiny shinyjs shinythemes tidyr]; }; - GARS = derive2 { name="GARS"; version="1.1.0"; sha256="0qczfvlywnqiz06ggvndmq32sg61qm7njg77fzml5v66anqsqmhq"; depends=[cluster DaMiRseq ggplot2 MLSeq SummarizedExperiment]; }; + GARS = derive2 { name="GARS"; version="1.1.1"; sha256="004i5nkmdi61fkkxps1frlhs4gd8ix6s3yypzrl6s4afvm05hw4p"; depends=[cluster DaMiRseq ggplot2 MLSeq SummarizedExperiment]; }; GAprediction = derive2 { name="GAprediction"; version="1.7.0"; sha256="04bxpyc13mq7klkpkyw574cbk6xsjn9n91za7hvmzg5xfzgdr2rg"; depends=[glmnet Matrix]; }; - GDCRNATools = derive2 { name="GDCRNATools"; version="1.1.0"; sha256="0i8gyq3rk79ph099bivgrvl33c73vhrlqss0ms61zv8r392prvjh"; depends=[BiocParallel biomaRt clusterProfiler DESeq2 DOSE DT edgeR GenomicDataCommons ggplot2 gplots jsonlite limma org_Hs_eg_db pathview rjson shiny survival survminer XML]; }; - GDSArray = derive2 { name="GDSArray"; version="1.1.0"; sha256="0jn3jjpr5z3nrhral7bphlxnc5mhg2nllpzf73j2i4q7dbyhjxic"; depends=[BiocGenerics DelayedArray gdsfmt IRanges S4Vectors SeqArray SNPRelate]; }; - GEM = derive2 { name="GEM"; version="1.7.0"; sha256="01vyj5nhzs6g3drnybl5i5wj2n2x50wjfnb2q62r053rz7r4xpwj"; depends=[ggplot2]; }; - GENESIS = derive2 { name="GENESIS"; version="2.11.5"; sha256="1vkxb4ry8ghl9c38lr5dkwkf5kjak0h0vq18k69fpj94dfkkn91y"; depends=[Biobase BiocGenerics dplyr gdsfmt GenomicRanges graph GWASTools IRanges Matrix S4Vectors SeqArray SeqVarTools]; }; + GDCRNATools = derive2 { name="GDCRNATools"; version="1.1.9"; sha256="134f9264b1br2s2d99dlad1r8nwzkv78qkr7iqym8s1anl7xsh9j"; depends=[BiocParallel biomaRt clusterProfiler DESeq2 DOSE DT edgeR GenomicDataCommons ggplot2 gplots jsonlite limma org_Hs_eg_db pathview rjson shiny survival survminer XML]; }; + GDSArray = derive2 { name="GDSArray"; version="1.1.1"; sha256="0cgs1fhzqax8nbihifhmgd6clk4wf3586x85cmg06ydxdh9yyzlv"; depends=[BiocGenerics DelayedArray gdsfmt S4Vectors SeqArray SNPRelate]; }; + GEM = derive2 { name="GEM"; version="1.7.1"; sha256="0sxlqkd2rhi511jmi2c82ib0krx9pynssvw0gcr2mrrxj5gy2vcz"; depends=[ggplot2]; }; + GENESIS = derive2 { name="GENESIS"; version="2.11.17"; sha256="1czvvmqnmpx9wpq6hw4xfwhj1vjrwdrwbj8b4zcs1x7dv8qkvyb5"; depends=[Biobase BiocGenerics data_table dplyr foreach gdsfmt GenomicRanges GWASTools igraph IRanges Matrix reshape2 S4Vectors SeqArray SeqVarTools SNPRelate]; }; GENIE3 = derive2 { name="GENIE3"; version="1.3.1"; sha256="0zp1g97xmigjarpbmfnay1gac5fjhcslrdp656gzafdah32k2nzl"; depends=[reshape2]; }; GEOmetadb = derive2 { name="GEOmetadb"; version="1.43.0"; sha256="05ad0h84vqkcp9b9966dsmgwl4r2xsg9wjjgwcfx00yc9jgg94lj"; depends=[GEOquery RSQLite]; }; - GEOquery = derive2 { name="GEOquery"; version="2.49.0"; sha256="0ylny4lni33hj1qspqig7iw9g3h9mz4yc9bj8cdf13w2qj4sjysz"; depends=[Biobase dplyr httr limma magrittr readr tidyr xml2]; }; + GEOquery = derive2 { name="GEOquery"; version="2.49.1"; sha256="1vxhz9drmj90j67ga7jflzb602bs1b9qdamz7vgazlpl0xj7ls5s"; depends=[Biobase dplyr httr limma magrittr readr tidyr xml2]; }; GEOsubmission = derive2 { name="GEOsubmission"; version="1.33.0"; sha256="17qck1a7szkgaixkjzq2c4vw7kb7cy8sv609z3i8h0pljrprvx07"; depends=[affy Biobase]; }; GEWIST = derive2 { name="GEWIST"; version="1.25.0"; sha256="0dr7vz9v8cfjg8vxxqs0c7i4vzvfdnp741b82radwb0ya4crfml0"; depends=[car]; }; GGBase = derive2 { name="GGBase"; version="3.43.2"; sha256="1kwh6di0kgw821mh0gmgrm8b0mlbcyji5yc0pn4v836w0wc0amqb"; depends=[AnnotationDbi Biobase BiocGenerics digest genefilter GenomicRanges IRanges limma Matrix S4Vectors snpStats SummarizedExperiment]; }; - GGtools = derive2 { name="GGtools"; version="5.17.0"; sha256="06qldw101w7syy1m9ynq9rpxs2546yzn8zdmsp416aawn3qw2xjb"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin Homo_sapiens IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; }; + GGtools = derive2 { name="GGtools"; version="5.17.1"; sha256="1p7wczch0nnb5ax5g1889iz3qr5ffwyhgvlrln19ypb20c454cnk"; depends=[AnnotationDbi biglm Biobase BiocGenerics Biostrings bit data_table ff GenomeInfoDb GenomicRanges GGBase ggplot2 Gviz hexbin Homo_sapiens IRanges iterators reshape2 ROCR Rsamtools rtracklayer S4Vectors snpStats VariantAnnotation]; }; GIGSEA = derive2 { name="GIGSEA"; version="0.99.25"; sha256="0k6njipzq9r6g9gkn9g2blkmhq752yv4n2127wxvxfi4kkwf8nfc"; depends=[locfdr MASS Matrix]; }; GISPA = derive2 { name="GISPA"; version="1.5.0"; sha256="1030cwbkccj2scjmszlzbxd28qgwga26hf86jly8xmw9qvpa77y1"; depends=[Biobase changepoint data_table genefilter GSEABase HH lattice latticeExtra plyr scatterplot3d]; }; GLAD = derive2 { name="GLAD"; version="2.45.1"; sha256="1cpjai8dxqb35xf2933rf4z08zmli760scz6s1zdzbgpc92dl2zl"; depends=[aws]; }; GMRP = derive2 { name="GMRP"; version="1.9.0"; sha256="06q87139z5dgl0c4i8jhry15q9ah9k19kgjmadkb55lfsb3akazn"; depends=[diagram GenomicRanges plotrix]; }; - GOFunction = derive2 { name="GOFunction"; version="1.29.0"; sha256="08xyzk6hs3v263k949l94g6xq9lg5k86yzgqr89bmcyinsxlqk1j"; depends=[AnnotationDbi Biobase DBI GO_db graph Rgraphviz SparseM]; }; - GOSemSim = derive2 { name="GOSemSim"; version="2.7.0"; sha256="1qxvx4mk49k5d51xnvxn8wsw6dsidskpx6qddnm42ls9a4d9cypd"; depends=[AnnotationDbi GO_db Rcpp]; }; + GOFunction = derive2 { name="GOFunction"; version="1.29.1"; sha256="05yz8kl6m3ypdvi5mb813nvc8s75ybbc16ppdza6pkrf5cdawy55"; depends=[AnnotationDbi Biobase DBI GO_db graph Rgraphviz SparseM]; }; + GOSemSim = derive2 { name="GOSemSim"; version="2.7.1"; sha256="1q1h4ak6ki9hn9psrx17psf7kmcn2c7jy5q428qvwk4raq5fhdh0"; depends=[AnnotationDbi GO_db Rcpp]; }; GOSim = derive2 { name="GOSim"; version="1.19.0"; sha256="0irpycjkzzdymg50zf2szgf7v4s2s0skfpjf5ckdrzskkjr2jzc1"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; }; - GOTHiC = derive2 { name="GOTHiC"; version="1.17.0"; sha256="0n0h9k190p1glmvlrdpa5xdxj797mfdzb109yj5wy981s5q11gpb"; depends=[BiocGenerics Biostrings BSgenome data_table GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; }; + GOTHiC = derive2 { name="GOTHiC"; version="1.17.1"; sha256="00na8sn5fszb9z0z58xwlrxzwvxsahhisn2sc8g6xqcfld231pfr"; depends=[BiocGenerics Biostrings BSgenome data_table GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; }; GOexpress = derive2 { name="GOexpress"; version="1.15.0"; sha256="0k1hiinzn4553gh6app0kvd84md0g3jydv1y2rlzrcasamba7xvv"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr]; }; - GOfuncR = derive2 { name="GOfuncR"; version="1.1.2"; sha256="0w2f866j82qcyvjj2cn9cqmaxx0sijywbxhsqfkvrsr8vbkhbmgi"; depends=[AnnotationDbi GenomicRanges gtools IRanges mapplots Rcpp vioplot]; }; - GOpro = derive2 { name="GOpro"; version="1.7.0"; sha256="07qpvf17w1cq8qxdg0xdygdgnk9dc15ar7422q0y54kcgnfq0zj4"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; }; + GOfuncR = derive2 { name="GOfuncR"; version="1.1.6"; sha256="10bvn7hq8igd1wj4izg6nb06v4dn88gc65r7pq02z29dz1n5rbnv"; depends=[AnnotationDbi GenomicRanges gtools IRanges mapplots Rcpp vioplot]; }; + GOpro = derive2 { name="GOpro"; version="1.7.1"; sha256="0np0df5nfgcr435ngs8bbfiklp8b3v01842jkfdf2wwasx7c4mlw"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; }; GOstats = derive2 { name="GOstats"; version="2.47.0"; sha256="1dxzr3xnn60iy2xv8k0j1r9bz1lq1g1n792gzl308dsy35p25cim"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL Rgraphviz]; }; + GOsummaries = derive2 { name="GOsummaries"; version="2.17.2"; sha256="1ndpqr43rs3wrsrm5i0bn4xhcjylpddf95vnmyzq3rn3vc0y89sd"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; }; GRENITS = derive2 { name="GRENITS"; version="1.33.0"; sha256="1jgsk0wcrkcvf6cgypmdyj6zjfxwxan5xm88l1ycdrilfrx1g582"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; - GRmetrics = derive2 { name="GRmetrics"; version="1.7.0"; sha256="1vbnbn7r4fjv2p2qn5681kg0yqj5s1k4hf5jj52qgzjrp2qs4s6l"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; }; - GRridge = derive2 { name="GRridge"; version="1.5.0"; sha256="10kz82nj90ilkj6wlsfvqlqrikgm5qw95m02xn99vghs4bj3yh0d"; depends=[glmnet graph Iso mvtnorm penalized survival]; }; + GRmetrics = derive2 { name="GRmetrics"; version="1.7.3"; sha256="1xnbfqqw63inh1fyfclb369b6j3ihn6jnvglkmrvp609x104sakb"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; }; + GRridge = derive2 { name="GRridge"; version="1.5.3"; sha256="1bdv13j5vk38mrj06dms6xgyl21xqf5rzp8f5y8p7a0q36npflcr"; depends=[glmnet graph Iso mvtnorm penalized survival]; }; GSALightning = derive2 { name="GSALightning"; version="1.9.0"; sha256="1qwq8yawf0llik4880y9j3qzbl9py404wrp6p2738qjb1mxyx9nr"; depends=[data_table Matrix]; }; - GSAR = derive2 { name="GSAR"; version="1.15.0"; sha256="0i1rapjvdyw596vaqvsk49qbbrjnz1pam34559ws767r70vp0nng"; depends=[igraph]; }; - GSCA = derive2 { name="GSCA"; version="2.11.0"; sha256="1w3028l6bj92phwhnxs71vxc1wn1bbqac37f4anr8wrxw1bvngid"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; }; - GSEABase = derive2 { name="GSEABase"; version="1.43.0"; sha256="0f1rh227kx0wxndvgc283jfml5v2zmf184ajghflpq2crhv0sj7j"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; }; - GSEABenchmarkeR = derive2 { name="GSEABenchmarkeR"; version="1.1.0"; sha256="1ykpinxwz9hqpb8wjrv8jwcq4gmnjkmxg4b8akgdwlypv766smgj"; depends=[AnnotationDbi AnnotationHub Biobase BiocFileCache BiocParallel edgeR EnrichmentBrowser ExperimentHub GEOquery KEGGandMetacoreDzPathwaysGEO KEGGdzPathwaysGEO rappdirs S4Vectors SummarizedExperiment]; }; + GSAR = derive2 { name="GSAR"; version="1.15.1"; sha256="185ywirc49x7dy3vzy346avzsc16xjzsdr4njfr7f5bc421xkyxz"; depends=[igraph]; }; + GSCA = derive2 { name="GSCA"; version="2.11.1"; sha256="1ahkd5ivr38c4igmwdr5fk5kaysw3128a4y15ydz2ab2488vgsd4"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; }; + GSEABase = derive2 { name="GSEABase"; version="1.43.2"; sha256="1zhzvcjv9m9d0qmhf5csafq5inb1czkmwxm1ivyh2zrn2a66f8kl"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; }; + GSEABenchmarkeR = derive2 { name="GSEABenchmarkeR"; version="1.1.1"; sha256="102hvayxljl0nk4593aw0hdpdr929v5yhknyppnxyqrnmply8vqp"; depends=[AnnotationDbi AnnotationHub Biobase BiocFileCache BiocParallel edgeR EnrichmentBrowser ExperimentHub GEOquery KEGGandMetacoreDzPathwaysGEO KEGGdzPathwaysGEO rappdirs S4Vectors SummarizedExperiment]; }; GSEAlm = derive2 { name="GSEAlm"; version="1.41.0"; sha256="1di0d7zpsigi6k4bxfnq0yniyssxrmzdih3xayg6facpwgyhkp6n"; depends=[Biobase]; }; GSRI = derive2 { name="GSRI"; version="2.29.0"; sha256="0g3nncckasyx3n6nq5aihahzk73h6xb1m8xmq3m046vz245ny76x"; depends=[Biobase fdrtool genefilter GSEABase les]; }; GSReg = derive2 { name="GSReg"; version="1.15.0"; sha256="1qazhsx6gfnywwkhxip962v4jr5njbf97k36nbnq20q0yavwgzhz"; depends=[AnnotationDbi GenomicFeatures Homo_sapiens org_Hs_eg_db]; }; - GSVA = derive2 { name="GSVA"; version="1.29.0"; sha256="1yay4qw83jfpg1sskh8aizwblj1cxvjb974s7hbrc9a8z0dlkcnn"; depends=[Biobase BiocGenerics geneplotter GSEABase shiny shinythemes]; }; + GSVA = derive2 { name="GSVA"; version="1.29.3"; sha256="12x52iq2c9y7y3hfza849754xf8z8ysh41dk0id7dy9mbjawvz7d"; depends=[Biobase BiocGenerics geneplotter GSEABase shiny shinythemes]; }; GUIDEseq = derive2 { name="GUIDEseq"; version="1.11.0"; sha256="1qxb0mrrldyac16zfzkqcy11750hakr4hgqm8ai1cabr6xd5yna1"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table GenomeInfoDb GenomicAlignments GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; }; - GWASTools = derive2 { name="GWASTools"; version="1.27.1"; sha256="1w0magisa8rv0s1kppppas3lacrkmkg7finjc3bja1dh3npd1v5j"; depends=[Biobase DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; }; + GWASTools = derive2 { name="GWASTools"; version="1.27.3"; sha256="0snjz7vqfq5izfk68z3r7d0356almksxbsc79m2ryk7mkfjfw5bx"; depends=[Biobase DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; }; GateFinder = derive2 { name="GateFinder"; version="1.1.0"; sha256="1blj8407nl6nsn8dyg31xj4ii8rr2rfkg35g1hf97j60dk53bmwf"; depends=[diptest flowCore flowFP mvoutlier splancs]; }; GenRank = derive2 { name="GenRank"; version="1.9.0"; sha256="05g9mram44zs76m48rvplwdhdlhkygfxrzgdsd43was2xvyj6nvb"; depends=[matrixStats reshape2 survcomp]; }; GenVisR = derive2 { name="GenVisR"; version="1.13.2"; sha256="1ca47n9ddnm20vjj7070wfmmd9ff8w58d5rd79sq23hszmzwyzlf"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome data_table DBI FField GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales VariantAnnotation viridis]; }; - GeneAnswers = derive2 { name="GeneAnswers"; version="2.23.0"; sha256="08fgg33yls55357a45zfcghk87z7z2lqzh8wfiina122yg29c7ss"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; }; - GeneBreak = derive2 { name="GeneBreak"; version="1.11.0"; sha256="1nw97k4cxd7l35r14jq5mf46wa4rlfm2zg28x176z6wh0jlz4gba"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; + GeneAccord = derive2 { name="GeneAccord"; version="0.99.13"; sha256="1rw3wrgvqxznia7p0vm55dkq5rfks1gq5nixcf4ljzd9kcwc4ggs"; depends=[biomaRt caTools dplyr ggplot2 ggpubr gtools magrittr maxLik RColorBrewer reshape2 tibble]; }; + GeneAnswers = derive2 { name="GeneAnswers"; version="2.23.1"; sha256="0nxilnnhb48jwbplwhndwd8y5rlmhyjfjywc1whcij3hz9f6yzp9"; depends=[annotate Biobase downloader Heatplus igraph MASS RBGL RColorBrewer RCurl RSQLite XML]; }; + GeneBreak = derive2 { name="GeneBreak"; version="1.11.1"; sha256="0pyvj6grznl5qjki857zfhqcn05xwhicm6l1jxa1jc0aav91y764"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; }; GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.27.0"; sha256="0bmhxzrg5d7v4lv4k2igl7ah8fncrggyziwqyhawavig17i1iqzc"; depends=[Biobase PGSEA]; }; GeneGA = derive2 { name="GeneGA"; version="1.31.0"; sha256="0fdfb6x7rjg4ak5xbikwj6fmmrnr3hnsi97amn69w81087228b5g"; depends=[hash seqinr]; }; GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.7.0"; sha256="03kkfv7vj717brzdw346yapxfg414v84wncqqrv3si03q4w450mz"; depends=[data_table FactoMineR GenomicRanges GGtools igraph IRanges kernlab mvtnorm plspm rioja Rsamtools snpStats]; }; GeneMeta = derive2 { name="GeneMeta"; version="1.53.0"; sha256="18f1nca21drjpv55b4d92zkgqr3zqhzp98slq6xfqvsj3rip6y5v"; depends=[Biobase genefilter]; }; - GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.23.0"; sha256="1076pgsykk88dswza9m1bbh1nzvb5l1680h0q971vdvy1z1sks4c"; depends=[graph htmlwidgets plyr Rcpp Rgraphviz rjson XML]; }; + GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.23.2"; sha256="1nikjknsfy99i3b3r384gjlw8rzk4wv1wqflwpnrnffvzxh3sr5d"; depends=[graph htmlwidgets plyr Rcpp Rgraphviz rjson XML]; }; GeneOverlap = derive2 { name="GeneOverlap"; version="1.17.0"; sha256="0dqsq1sd1ly6gvnpq3xcv9idr30kazx97jha9icv1g64d337l289"; depends=[gplots RColorBrewer]; }; GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.37.0"; sha256="1672nriz5r0gpgb6c9bsa864ap3ap68n1igvpf9q8mf3sw659m3b"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; }; GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.25.0"; sha256="1lwszjpxp9bj0hd5z1kasq2qv49swji3ib1ljlph22wh0j9jimid"; depends=[Biobase limma MASS survival]; }; - GeneSelector = derive2 { name="GeneSelector"; version="2.31.0"; sha256="134l462i60mym5k4z46nfx1f7r2r0fa069v1jddrjfmcv3v0gbs8"; depends=[Biobase limma multtest samr siggenes]; }; + GeneSelector = derive2 { name="GeneSelector"; version="2.31.2"; sha256="1z346x227rs0nlyzf1idmcb2s05fhp68i3cjiib2d2328fs0yzyw"; depends=[Biobase limma multtest samr siggenes]; }; GeneStructureTools = derive2 { name="GeneStructureTools"; version="1.1.0"; sha256="0w8ydly5qi8cvdhhda2q3k8fj9k9v1sg3c45h4ki02vx19j2kap0"; depends=[Biostrings BSgenome_Mmusculus_UCSC_mm10 data_table GenomicRanges Gviz IRanges plyr rtracklayer S4Vectors stringdist stringr]; }; GeneticsDesign = derive2 { name="GeneticsDesign"; version="1.49.0"; sha256="1n9d1i45dcmp2irnsc5ak9pk33r68nzd84iixylwaj302l7yphjs"; depends=[gmodels gtools mvtnorm]; }; GeneticsPed = derive2 { name="GeneticsPed"; version="1.43.1"; sha256="0agd99r4jhp4y2ix5qrbwrycy3r8pc1cwa09ib3mhg5jdszm6jr8"; depends=[gdata genetics MASS]; }; - GenoGAM = derive2 { name="GenoGAM"; version="1.9.0"; sha256="02f7xvsv4l27dqj6cxm363n67kkbyz26z36gl4mybcgivvdvmi6h"; depends=[BiocParallel Biostrings data_table DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges IRanges mgcv reshape2 Rsamtools S4Vectors SummarizedExperiment]; }; + GenoGAM = derive2 { name="GenoGAM"; version="1.99.0"; sha256="18s3hh2gis61sakld098ffpihy2fd11sia94cxxq9cy0wl49bzci"; depends=[BiocParallel Biostrings data_table DelayedArray DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges HDF5Array IRanges Matrix Rcpp RcppArmadillo rhdf5 Rsamtools S4Vectors sparseinv SummarizedExperiment]; }; GenomeGraphs = derive2 { name="GenomeGraphs"; version="1.41.0"; sha256="07vwj2pbrxgj3k673m8xrf3cpqc1g753fvj950qwmy4jmz6s8w04"; depends=[biomaRt]; }; - GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.17.1"; sha256="1ck578vgv3ya4kgdacxspiqrx8150zic0va745f98gafx2cv7b66"; depends=[BiocGenerics GenomeInfoDbData IRanges RCurl S4Vectors]; }; - GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.17.2"; sha256="0n3rl6mlyn1q4rjbjh8dlbq7sy192jc2zy3y4qlaacmmfrw4sv5h"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; - GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.5.3"; sha256="0nagrdckv853kfqrajs8jr2zhmmipnw36nsa8nr796y6q7ldq492"; depends=[dplyr GenomicRanges httr IRanges jsonlite lazyeval magrittr rappdirs readr S4Vectors SummarizedExperiment xml2]; }; - GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.33.0"; sha256="1dnj1drlly4ac6q29zycvyjaw50fl6l1iqwhsn5syvywb5ccmgh5"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; }; - GenomicFiles = derive2 { name="GenomicFiles"; version="1.17.0"; sha256="08zjr3x7sn5fpqfl021vc8imdprd18hanyq7c2gwn5r0y30cyxrp"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; - GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.15.0"; sha256="0p2nsfwfxkl16iwv5apaikd6abbi21czdy7wh9kkyb4frh2938yd"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; }; - GenomicRanges = derive2 { name="GenomicRanges"; version="1.33.6"; sha256="07allayr8aflgra393xikfd5zs1s8b2yrsw308dqdxjyc0i3497i"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; }; - GenomicScores = derive2 { name="GenomicScores"; version="1.5.1"; sha256="1pkisnqp2rwdyxxm5504107scc0kds0ry07xmx451bn1i52lg3n1"; depends=[AnnotationHub Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors XML]; }; - GenomicTuples = derive2 { name="GenomicTuples"; version="1.15.1"; sha256="1xin5m11q94w64kcb6aqsi422cgbcagb0g45ir90dqf9d79v8vjz"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; + GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.17.4"; sha256="1kma1ywai2l8lknng1hpp5nxgv45rwiih0ac9nxmg5ydb910m2z0"; depends=[BiocGenerics GenomeInfoDbData IRanges RCurl S4Vectors]; }; + GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.17.3"; sha256="17kdllb2griy85qdk8nkx1qislc424kpibsrfb2pirf6xjm82rxn"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; }; + GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.5.8"; sha256="0gp8izsk2kb2adv8ykmsjzba39lbkw02061f5j82ysvgzmb2gh16"; depends=[dplyr GenomicRanges httr IRanges jsonlite lazyeval magrittr rappdirs readr S4Vectors SummarizedExperiment xml2]; }; + GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.33.6"; sha256="0qq5yh524qxd3qa9i10niqk3aw4ff7b6xfr10041gk1r94l7apyv"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; }; + GenomicFiles = derive2 { name="GenomicFiles"; version="1.17.4"; sha256="160mnxz41wzlqigc9r40pkn5jc0raa84y1yjiyhj1406fv2aaj6n"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; + GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.15.1"; sha256="0jga57bna3fbfrzp9525mzp9c6amy8i6i1j65vf3l7hw75d8q20z"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; }; + GenomicRanges = derive2 { name="GenomicRanges"; version="1.33.14"; sha256="1vmvmrd65dxhm06r879kqmncs9f4sg5z70fi0409b2078ia4qiyp"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; }; + GenomicScores = derive2 { name="GenomicScores"; version="1.5.6"; sha256="1fyich4fdz3pfxi95mdz6mmnva9kb7ak5wslzlh6sar62cfk17mx"; depends=[AnnotationHub Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors XML]; }; + GenomicTuples = derive2 { name="GenomicTuples"; version="1.15.2"; sha256="0hgnz5f5d3wh54icj36v6j06q87w19acnyd696aw78fk590mkvs5"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; Genominator = derive2 { name="Genominator"; version="1.35.0"; sha256="0qvzw9r8hn19gzkj6r94v4787h9lbw8y2s9k7zasn2cdyx55074i"; depends=[BiocGenerics DBI GenomeGraphs IRanges RSQLite]; }; Glimma = derive2 { name="Glimma"; version="1.9.2"; sha256="1njcjla1az23lrg5j93s1hxjrrjsf808plmvdhiai14fdlgzfb8w"; depends=[edgeR jsonlite S4Vectors]; }; - GlobalAncova = derive2 { name="GlobalAncova"; version="3.49.0"; sha256="0y71r0biivxpyrjkl2132ngnz1fl5byi7rbig9g0j5svsmh9kk48"; depends=[annotate AnnotationDbi corpcor globaltest]; }; - GoogleGenomics = derive2 { name="GoogleGenomics"; version="2.3.0"; sha256="10iwh4z3zpv8x239y8i5qpp88ygyg4fiyhsgpyld11fg3d1qkn4h"; depends=[Biobase Biostrings GenomeInfoDb GenomicAlignments GenomicRanges httr IRanges rjson Rsamtools S4Vectors VariantAnnotation]; }; + GlobalAncova = derive2 { name="GlobalAncova"; version="3.99.3"; sha256="1d38kp53qw25g2pdsiz4g38nm5hjr537i6ly7lvabvh5zim7h0bn"; depends=[annotate AnnotationDbi Biobase corpcor dendextend globaltest GSEABase VGAM]; }; + GoogleGenomics = derive2 { name="GoogleGenomics"; version="2.3.2"; sha256="00qf7zadaryylkkizfdaapdppzxkfwdzwkv4qxkvwz1pkvr1yc5r"; depends=[Biobase Biostrings GenomeInfoDb GenomicAlignments GenomicRanges httr IRanges rjson Rsamtools S4Vectors VariantAnnotation]; }; GraphAT = derive2 { name="GraphAT"; version="1.53.0"; sha256="0wsn0nfj4qds2kxm3gxfx8wwyf00l0ifvk660czm7zc6ppfj1sb8"; depends=[graph MCMCpack]; }; GraphAlignment = derive2 { name="GraphAlignment"; version="1.45.0"; sha256="0mdy8g3i4b7wy9zqfbb1zia1h84kv2av4yl6japzz5ymiipjaimy"; depends=[]; }; - GraphPAC = derive2 { name="GraphPAC"; version="1.23.0"; sha256="1wy20xjw6ikdjd66pk654dj5zcaxm2mn8vnwxr6s628x9c70rh0w"; depends=[igraph iPAC RMallow TSP]; }; + GraphPAC = derive2 { name="GraphPAC"; version="1.23.1"; sha256="1xr4ys2ckzyc8w5c3pmywp341viac9xv9hz691lgm61krafyh370"; depends=[igraph iPAC RMallow TSP]; }; GreyListChIP = derive2 { name="GreyListChIP"; version="1.13.0"; sha256="0m9qvb3rw1hr119vq2k5fdbywq8vfgfhxwm6r9nfmxdhdir6178j"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; }; Guitar = derive2 { name="Guitar"; version="1.19.0"; sha256="0khy7vhr8r56r14kiqz83py227jaji46aqlqs8yhj7kh6cgh59c5"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer]; }; Gviz = derive2 { name="Gviz"; version="1.25.0"; sha256="0c64bn8dqvcwi3jdfx0yg2jc7x1v41h4py7ily9z82ms8lfv7jh8"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; }; - HDF5Array = derive2 { name="HDF5Array"; version="1.9.4"; sha256="1ld8fm7zvd3kzrqynx3q8vzcbn1k82lim1fnhz449x4gxi6gddpg"; depends=[BiocGenerics DelayedArray IRanges rhdf5 S4Vectors]; }; - HDTD = derive2 { name="HDTD"; version="1.15.0"; sha256="00zrdmpscbycmlli7qvx6vdy7nyckxfazylrx83qaffg9d7a9wc4"; depends=[Rcpp RcppArmadillo]; }; + HDF5Array = derive2 { name="HDF5Array"; version="1.9.19"; sha256="01421q7hz1kmj4s4iwzb01ibq3ssz3sh67smg0ap52d1ykqqx8mx"; depends=[BiocGenerics DelayedArray IRanges rhdf5 S4Vectors]; }; + HDTD = derive2 { name="HDTD"; version="1.15.1"; sha256="08h1wnsacr74ynjwn4aw98lwf9pjf081g1yi4557xb7cfzf4l6pn"; depends=[Rcpp RcppArmadillo]; }; HELP = derive2 { name="HELP"; version="1.39.0"; sha256="1sb43vndrk5qbazxwx3n0lmkb43525vmarj3hbkqplid5bppcddp"; depends=[Biobase]; }; HEM = derive2 { name="HEM"; version="1.53.0"; sha256="090k94d4bfmf1fqbxhlp2vb70x7934xwq8fjmgc2wlrq5d1iqjff"; depends=[Biobase]; }; - HIBAG = derive2 { name="HIBAG"; version="1.17.1"; sha256="1raldjan5w9fvvk0hrwydyb1j6rs3566ks07nhym16f7bzrml85b"; depends=[]; }; + HIBAG = derive2 { name="HIBAG"; version="1.17.2"; sha256="08fdgnrzx113cqk7v6wv7kfj13lhg2j4f86ap4ily1wirbb0q8y2"; depends=[]; }; + HIREewas = derive2 { name="HIREewas"; version="0.99.8"; sha256="1df575f0fld051il5cpz27syvfmm70idvhr2af82r2lqbzz4ik8v"; depends=[gplots quadprog]; }; HMMcopy = derive2 { name="HMMcopy"; version="1.23.0"; sha256="1ciawdh971fwfa60lb1469pqgmw9giyqksqk5zkfbal967pia1ck"; depends=[geneplotter IRanges]; }; + HPAanalyze = derive2 { name="HPAanalyze"; version="0.99.19"; sha256="1s5inkcpsga791ranlf7c3bbdq42s05h4q7ba465lym685gpz18l"; depends=[cowplot dplyr ggplot2 hpar magrittr readr reshape2 tibble tidyr XLConnect xml2]; }; HTSFilter = derive2 { name="HTSFilter"; version="1.21.0"; sha256="1c85v66fax6h00dkny5308mv1vsdinj590x6w4aghd6b4nb16qgr"; depends=[Biobase BiocParallel DESeq DESeq2 edgeR]; }; HTSanalyzeR = derive2 { name="HTSanalyzeR"; version="2.33.0"; sha256="10agvn6dcmzczj5xdpviisnamfs6642xskh7zgh14c0p13gv76xs"; depends=[AnnotationDbi biomaRt BioNet cellHTS2 graph GSEABase igraph RankProd]; }; HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.11.0"; sha256="0k6ql5pkn2yjvmf13g4lzrqb0jcnp0rqsvakkqmirpj2b40wynj1"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; }; HTqPCR = derive2 { name="HTqPCR"; version="1.35.0"; sha256="09wc412znd92fi3lm909mrz3xd9cjiwiw6b0ncki1yc186faizr4"; depends=[affy Biobase gplots limma RColorBrewer]; }; - Harman = derive2 { name="Harman"; version="1.9.0"; sha256="1kcv48g1fwh36xdw8cx0v28n4dl9s4414vwa0alnwdy2j0b9n8qk"; depends=[Rcpp]; }; + Harman = derive2 { name="Harman"; version="1.9.1"; sha256="1nk5szn0zgw1301m6jn9kr6qp3z1766a2nzp8sp9x6fnigc7zmsi"; depends=[Rcpp]; }; Harshlight = derive2 { name="Harshlight"; version="1.53.0"; sha256="0nlghc13lmhvsy06spvzhc7cihpzayli1iyid7h7ifa8zik6dz72"; depends=[affy altcdfenvs Biobase]; }; Heatplus = derive2 { name="Heatplus"; version="2.27.0"; sha256="1fyz7272w2ixisvg0gsv30svppd6xd47r79xg1r1y2qy62q04bca"; depends=[RColorBrewer]; }; HelloRanges = derive2 { name="HelloRanges"; version="1.7.0"; sha256="1h88zrvx3h4s7jsadyf3f3x6p0hbkn2f6smnkdmm7fva4lhlg7hl"; depends=[BiocGenerics Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; - HiCcompare = derive2 { name="HiCcompare"; version="1.3.0"; sha256="1kj8aqq4ddlsh3xnrzbj3hid67ai7p7d4hk2avxscicyrrskkq8w"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap QDNAseq S4Vectors]; }; + HiCBricks = derive2 { name="HiCBricks"; version="0.99.16"; sha256="11rafxnh91mgl73xvqw83q9fhvm1gy6ma3c6r1xrwbjkwib5iam5"; depends=[BiocFileCache curl data_table digest GenomeInfoDb GenomicRanges ggplot2 IRanges R6 rappdirs RColorBrewer reshape2 rhdf5 S4Vectors scales stringr viridis]; }; + HiCcompare = derive2 { name="HiCcompare"; version="1.3.2"; sha256="0mqslkc98yz8hhil6fapxwzs4qy5v784knnakkm01rz0sjpb8jbp"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap QDNAseq S4Vectors]; }; HiTC = derive2 { name="HiTC"; version="1.25.0"; sha256="1mryn42bsvswb0gf027aw4qbrk57w8859zyvicymdi3d78pw8rmv"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; }; - HilbertCurve = derive2 { name="HilbertCurve"; version="1.11.1"; sha256="0mv3ijx5506wng7zs556k2ljb11si73f9109hg3i8jl5qcn5zdn9"; depends=[circlize GenomicRanges HilbertVis IRanges png]; }; - HilbertVis = derive2 { name="HilbertVis"; version="1.39.0"; sha256="068jm0ls9ix06w4argkaldfrsx6fynywh0776ygn0iaxmcjm2fpb"; depends=[lattice]; }; + HilbertCurve = derive2 { name="HilbertCurve"; version="1.11.2"; sha256="0kxl5ihmgvsafiwi576kgyz1g60a25w6r8m4g9w6pzdwcxzp871d"; depends=[circlize GenomicRanges HilbertVis IRanges png]; }; + HilbertVis = derive2 { name="HilbertVis"; version="1.39.2"; sha256="1qmnv0m4ywcjwqljvs9kbif63cyr842lzsj2flh5f3bf7pha1s7f"; depends=[lattice]; }; HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.39.0"; sha256="1jq70si8q74jg22zg4gx4c6nbi8zszgiqrbc6cavn4v578fam3z1"; depends=[HilbertVis]; }; HybridMTest = derive2 { name="HybridMTest"; version="1.25.0"; sha256="0g667li0fhf085ha9210xwj3r0sy7ks9lj5v8lpiyz48yi8w2nfn"; depends=[Biobase fdrtool MASS survival]; }; - IHW = derive2 { name="IHW"; version="1.9.1"; sha256="0h7gpmcnlahclhplfmi89s3ai3syg1cdvv2mc6nrx9kq7dckl3xv"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; - IMAS = derive2 { name="IMAS"; version="1.5.0"; sha256="0lwn1kp5z488yryx8zzi0b5kdm5kzycdbpnn6lbx6ixjkhs26fkl"; depends=[AnnotationDbi BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfortify ggplot2 gridExtra IRanges IVAS lattice lme4 Matrix Rsamtools S4Vectors survival]; }; + IHW = derive2 { name="IHW"; version="1.9.2"; sha256="10lwbvr33xsxxs0sy8skyym81gw4328xxwdkhhmz0cyqgy23k3jr"; depends=[BiocGenerics fdrtool lpsymphony slam]; }; + IMAS = derive2 { name="IMAS"; version="1.5.1"; sha256="0p5rhnvkzms8bvwc5lhkgi8hyqsm82mdwmsk245xxrrjdn6ir6ff"; depends=[AnnotationDbi BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfortify ggplot2 gridExtra IRanges IVAS lattice lme4 Matrix Rsamtools S4Vectors survival]; }; IMMAN = derive2 { name="IMMAN"; version="1.1.0"; sha256="0sgyiq7wif4imq81qqgwhbrx54dr26gb22j79mzzjyprv8yxgdkj"; depends=[BiocFileCache Biostrings igraph seqinr STRINGdb]; }; IMPCdata = derive2 { name="IMPCdata"; version="1.17.0"; sha256="0r5j70i1mdrpxjznmb6i561076n1vk1h371kvlxkb8y343ajz7sq"; depends=[rjson]; }; + INDEED = derive2 { name="INDEED"; version="0.99.17"; sha256="0v9vx1zb3r6861h7zb2bg15a541q04v8k2pf3j0i8vd5az32knlv"; depends=[devtools glasso]; }; INPower = derive2 { name="INPower"; version="1.17.0"; sha256="1ilqffcbaxwk54m297f4znhbphjjipjfd82554z4mwdrkf0cz2lw"; depends=[mvtnorm]; }; INSPEcT = derive2 { name="INSPEcT"; version="1.11.0"; sha256="1na92547w6qn6dkhy3zp3gj1g3vr2y3kx6j78hnq0ch9l8k9s2c7"; depends=[Biobase BiocGenerics BiocParallel deSolve GenomicAlignments GenomicFeatures GenomicRanges IRanges preprocessCore pROC rootSolve Rsamtools S4Vectors]; }; IONiseR = derive2 { name="IONiseR"; version="2.5.0"; sha256="0gn75w73ahyk3vm70vq003rlg1wsazfy7qygdp4dnq0g9qpz8dyy"; depends=[BiocGenerics BiocParallel Biostrings bit64 dplyr ggplot2 magrittr rhdf5 ShortRead stringr tibble tidyr XVector]; }; - IPO = derive2 { name="IPO"; version="1.7.0"; sha256="096a1c2ybmki12kqj2y1njpjbsia4qqd3rmj851cmks9h33mxk8m"; depends=[BiocParallel CAMERA rsm xcms]; }; + IPO = derive2 { name="IPO"; version="1.7.1"; sha256="0hgflvvy840y822bk3bm2sj8yqc8q3nipxxqa5j6if17w10icvvn"; depends=[BiocParallel CAMERA rsm xcms]; }; IPPD = derive2 { name="IPPD"; version="1.29.0"; sha256="1gwsq17ipba4q7jby4hj7bwrpbfzach5spsvnb4571x7nr6yx7qg"; depends=[bitops digest MASS Matrix XML]; }; - IRanges = derive2 { name="IRanges"; version="2.15.14"; sha256="1w12vvyfi53hr45xhl1vzsygig9vdzlxkkyjsylbwc9ny595pam7"; depends=[BiocGenerics S4Vectors]; }; + IRanges = derive2 { name="IRanges"; version="2.15.19"; sha256="096d7hil68zhy2l2vhd0q5prkrzybbwl28fa00k7rbail5vh8r8v"; depends=[BiocGenerics S4Vectors]; }; ISoLDE = derive2 { name="ISoLDE"; version="1.9.0"; sha256="111p1wxyn3kqx6gdnrl55jwnlnqfa98wljkiw4wqqf2cdrykb7pr"; depends=[]; }; ITALICS = derive2 { name="ITALICS"; version="2.41.0"; sha256="1lj5n1xgq49xn8yv8q6lfg01hw8l4yc5ffc98falzhlcvqxhkvzc"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; }; IVAS = derive2 { name="IVAS"; version="2.1.0"; sha256="0ipw8834ag1j2qg3i5nnfcncrjpzhd2m5hzhn1bjpvhd357r1gn1"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges ggfortify ggplot2 IRanges lme4 Matrix S4Vectors]; }; - IWTomics = derive2 { name="IWTomics"; version="1.5.0"; sha256="0v5q1ywvgvcwlfh7a9krh06b1ad4i5kpnm67az81znliz3s2m60y"; depends=[fda GenomicRanges gtable IRanges KernSmooth S4Vectors]; }; + IWTomics = derive2 { name="IWTomics"; version="1.5.2"; sha256="1rmlr66mgg5nfm2b50g0a83ahs0xkkji1is930vjprrfcn6clmn2"; depends=[fda GenomicRanges gtable IRanges KernSmooth S4Vectors]; }; Icens = derive2 { name="Icens"; version="1.53.0"; sha256="16cxm1i6ir74l2x80wsp544ykffy91m4fv8v283nki0hx434pkn7"; depends=[survival]; }; IdMappingAnalysis = derive2 { name="IdMappingAnalysis"; version="1.25.0"; sha256="025zqjc36whlraq3hjz0p5dzj5m19y50clrlgrimrz4ag5bfmf2q"; depends=[Biobase boot mclust R_oo rChoiceDialogs RColorBrewer]; }; IdMappingRetrieval = derive2 { name="IdMappingRetrieval"; version="1.29.0"; sha256="0fn8xp7ybpg0z3bnk9sab53y7kflzys0r1cvikyp5n8pfkrr95g2"; depends=[AffyCompatible biomaRt ENVISIONQuery R_methodsS3 R_oo rChoiceDialogs RCurl XML]; }; IdeoViz = derive2 { name="IdeoViz"; version="1.17.0"; sha256="0yr7yisb9hr2jsdlv7m59p9kiaxssv6rj8x4rqzraaipd7cn0gcy"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; }; Imetagene = derive2 { name="Imetagene"; version="1.11.0"; sha256="1zswp6h2c9nn4p73knp4wsnbqv77gp86njzpxjvgqjmvfj57y8nc"; depends=[d3heatmap ggplot2 metagene shiny shinyBS shinyFiles shinythemes]; }; - ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.9.0"; sha256="00v2dfzcxwffpss873j1i74vl1qgimdqamyx4gj4cqjv76qcdrqc"; depends=[Biobase data_table ggplot2 gplots gtools heatmaply httr pheatmap plotly preprocessCore R6 reshape2 rjson Rlabkey rmarkdown scales]; }; + ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.9.3"; sha256="1dlb8dklkizcbmy7kc8mgr8d60k59j1zwgdfs9lf2zlxmzqz44zv"; depends=[Biobase curl data_table ggplot2 gplots gtools heatmaply httr pheatmap plotly preprocessCore R6 reshape2 rjson Rlabkey rmarkdown scales]; }; ImpulseDE = derive2 { name="ImpulseDE"; version="1.7.0"; sha256="0g34jfff5lsvzak21fdi2fdx9a2v0n1f2cmjsk62jkjzr9jpyp2f"; depends=[amap boot]; }; ImpulseDE2 = derive2 { name="ImpulseDE2"; version="1.5.0"; sha256="1f9nymih6fwq6p53x9f7zjblkdrrj0f89w1lv9f8bdz1y4icn1y4"; depends=[Biobase BiocParallel circlize ComplexHeatmap cowplot DESeq2 ggplot2 knitr Matrix S4Vectors SummarizedExperiment]; }; - InPAS = derive2 { name="InPAS"; version="1.13.0"; sha256="0hk6lr9sk4yvgj9pw0w48936lmgz478k5jfbh1jmybixgx9cnl7k"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; }; + InPAS = derive2 { name="InPAS"; version="1.13.1"; sha256="0wj459bay4ywq9aymdp2snw6fzhbrdfg80ya96z8kgprxvp2r21z"; depends=[AnnotationDbi Biobase BiocParallel BSgenome cleanUpdTSeq depmixS4 GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges limma preprocessCore S4Vectors seqinr]; }; InTAD = derive2 { name="InTAD"; version="1.1.0"; sha256="0pm720gl7apzbcqxd53gj4ynkglv4bb0xrzibcwbpwgsmi75g55c"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggpubr IRanges mclust MultiAssayExperiment qvalue rtracklayer S4Vectors SummarizedExperiment]; }; - IntEREst = derive2 { name="IntEREst"; version="1.5.1"; sha256="1drlpx96rfdr94i3aqvwb839ivwb6y4kg1qqip6hh33shrh7hzf0"; depends=[BiocGenerics BiocParallel Biostrings DBI DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges IRanges RMySQL Rsamtools S4Vectors seqinr seqLogo SummarizedExperiment]; }; - InterMineR = derive2 { name="InterMineR"; version="1.3.0"; sha256="0rsf9ssnzcsfynk3ifsn2g5hk8g8nlkli0x7b7p5x60w8pvawss4"; depends=[Biostrings GenomicRanges httr igraph IRanges RCurl RJSONIO S4Vectors sqldf SummarizedExperiment XML xml2]; }; - InteractionSet = derive2 { name="InteractionSet"; version="1.9.1"; sha256="0zdsdqmym0s09fp724xfa53bfy5isnj4gpxwaircl6js44rdp0f2"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix Rcpp S4Vectors SummarizedExperiment]; }; - IntramiRExploreR = derive2 { name="IntramiRExploreR"; version="1.3.0"; sha256="015mjy0fcch4z3nsy5jvyl6jcc6zigvfh4s35nm3yjw2plg06jm4"; depends=[igraph knitr]; }; + IntEREst = derive2 { name="IntEREst"; version="1.5.2"; sha256="0vm9bp8cp8igmxcsd8n8s9y5nmcm98fsj1albcn8p87iq2jgkvix"; depends=[BiocGenerics BiocParallel Biostrings DBI DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges IRanges RMySQL Rsamtools S4Vectors seqinr seqLogo SummarizedExperiment]; }; + InterMineR = derive2 { name="InterMineR"; version="1.3.3"; sha256="0x8nlvffa4i4rnk7ib11a29f5cr4vmvc4hspm0gir186zqcg7dw8"; depends=[Biostrings GenomicRanges httr igraph IRanges RCurl RJSONIO S4Vectors sqldf SummarizedExperiment XML xml2]; }; + InteractionSet = derive2 { name="InteractionSet"; version="1.9.5"; sha256="1dmk08y0416ffljinh16qvvnm7hifdbbfzpg59r9l0lqwgpkligk"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix Rcpp S4Vectors SummarizedExperiment]; }; + IntramiRExploreR = derive2 { name="IntramiRExploreR"; version="1.3.0"; sha256="015mjy0fcch4z3nsy5jvyl6jcc6zigvfh4s35nm3yjw2plg06jm4"; depends=[FGNet igraph knitr]; }; + IsoCorrectoR = derive2 { name="IsoCorrectoR"; version="0.99.3"; sha256="11py0fpn0lz62my2zfs1p5aahjjda259gnfwsa47jid6dx9lghw4"; depends=[dplyr magrittr pracma quadprog readr readxl stringr tibble WriteXLS]; }; IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.17.0"; sha256="0fx9zkvg8471kcyda3hvp7zjv6d1z1pr2sq5882xn1amhcjpwws1"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust orQA RColorBrewer Rcpp relimp tkrplot xlsx]; }; - IsoformSwitchAnalyzeR = derive2 { name="IsoformSwitchAnalyzeR"; version="1.3.1"; sha256="19pzz6airm4jghr699g2sx8d0m8sxplmgyy09508npwxq5kkw4rw"; depends=[Biostrings BSgenome cummeRbund DBI DRIMSeq edgeR futile_logger GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges plyr RColorBrewer reshape2 rtracklayer tximport VennDiagram]; }; - JunctionSeq = derive2 { name="JunctionSeq"; version="1.11.0"; sha256="1pq098zb6ynsrxmvppjvh4ws642sry12hz1rsc53ph5n375blxga"; depends=[Biobase BiocGenerics BiocParallel DESeq2 genefilter geneplotter GenomicRanges Hmisc IRanges locfit plotrix Rcpp RcppArmadillo S4Vectors statmod stringr SummarizedExperiment]; }; + IsoformSwitchAnalyzeR = derive2 { name="IsoformSwitchAnalyzeR"; version="1.3.10"; sha256="1r1y2fzhiv1r86jrd1miij164lq5pa6425shcd8jfza9igpnlmz6"; depends=[Biostrings BSgenome DBI DEXSeq dplyr DRIMSeq edgeR futile_logger GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges limma magrittr plyr RColorBrewer readr reshape2 rtracklayer stringr tximport VennDiagram]; }; + JunctionSeq = derive2 { name="JunctionSeq"; version="1.11.2"; sha256="1hhfam0yfrwyjvkzsn5pnx2564zggzw2y9163g4sxjxr5a0y5ggb"; depends=[Biobase BiocGenerics BiocParallel DESeq2 genefilter geneplotter GenomicRanges Hmisc IRanges locfit plotrix Rcpp RcppArmadillo S4Vectors statmod stringr SummarizedExperiment]; }; KCsmart = derive2 { name="KCsmart"; version="2.39.0"; sha256="1y5lrcl4inkdmbr9bma02j7g4r0my49jvc434mzgvjmv6zfilm4k"; depends=[BiocGenerics KernSmooth multtest siggenes]; }; - KEGGREST = derive2 { name="KEGGREST"; version="1.21.1"; sha256="1kk89li0nzp0g8p3v69c8b8ijqia9rz45139f56kl7vfvrr8l7yd"; depends=[Biostrings httr png]; }; + KEGGREST = derive2 { name="KEGGREST"; version="1.21.2"; sha256="1xbs8c2p4y0igwazh0iy7g0bsjqvrp76gdn3bfgvyig75x7fkiv0"; depends=[Biostrings httr png]; }; KEGGgraph = derive2 { name="KEGGgraph"; version="1.41.0"; sha256="0sd2m80q2igal5qh03qcdjpcyi6rxk8w3mxgd9rjars6ykcj0g84"; depends=[graph XML]; }; - KEGGprofile = derive2 { name="KEGGprofile"; version="1.23.0"; sha256="0y1whzp0q1hlrcg9qhba6fh5iimnqp6phvd7kl8phkyhi5zzsv9a"; depends=[AnnotationDbi biomaRt KEGG_db KEGGREST png RCurl TeachingDemos XML]; }; + KEGGlincs = derive2 { name="KEGGlincs"; version="1.7.3"; sha256="0mrzrcg0327hgp11i704qiyc53pplzmjdwbjxx12pqwaxrrkfijf"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO XML]; }; + KEGGprofile = derive2 { name="KEGGprofile"; version="1.23.2"; sha256="02yqlbav775sx6cipc93rnz2qrhay93k4vrgs9h4gcz949rchhwh"; depends=[AnnotationDbi biomaRt KEGG_db KEGGREST png RCurl TeachingDemos XML]; }; + KinSwingR = derive2 { name="KinSwingR"; version="0.99.10"; sha256="1mj7bdqlg7rsxpha7x1wcjkkavcmnb9bdz92xigksip5qsdcs2r1"; depends=[BiocParallel data_table sqldf]; }; LBE = derive2 { name="LBE"; version="1.49.0"; sha256="07r55w9f7a5fdp183rjx5f15jzkw73q6r7ra7drk887xylzmxvd0"; depends=[]; }; LEA = derive2 { name="LEA"; version="2.3.0"; sha256="1k7zxl6aa09kr2gmh6lhg1hdb332fqggdi8hk4gbjcgsa533sqcc"; depends=[]; }; LINC = derive2 { name="LINC"; version="1.9.0"; sha256="1295829apimwfiyhxzyl61wlabd7j18zdycrrai2f3d42005pfjw"; depends=[ape Biobase clusterProfiler DOSE ggplot2 ggtree gridExtra org_Hs_eg_db png Rcpp ReactomePA reshape2 sva]; }; LMGene = derive2 { name="LMGene"; version="2.37.0"; sha256="1pkgkn12bgmamfcbdi5c352v92q31rzwcq69kh00z7wb07flcmf2"; depends=[affy Biobase multtest survival]; }; - LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.7.1"; sha256="16agj2lk871hqnwjrwg59qxsblr7gb2pd5y5h734c2san34y09r3"; depends=[CAMERA xcms]; }; - LOLA = derive2 { name="LOLA"; version="1.11.0"; sha256="1pgxwcbd0sdb9npq6sjvbjjlqq13750795m9ycjz3mg2989y4rn5"; depends=[BiocGenerics data_table GenomicRanges IRanges reshape2 S4Vectors]; }; + LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.7.2"; sha256="1j14x79xmzxc64jr3k4mxhfsv20pwvzr253jnchywfagky8ad3a5"; depends=[CAMERA xcms]; }; + LOLA = derive2 { name="LOLA"; version="1.11.1"; sha256="1dk4b0cc1kgqd0b171pigvk445hl82bsx8izxwlg86zgrgmsb0sx"; depends=[BiocGenerics data_table GenomicRanges IRanges reshape2 S4Vectors]; }; LPE = derive2 { name="LPE"; version="1.55.0"; sha256="08pghdnq4l4zj21q3jz77x2hryjps1jk0rpdlv9kr207f535ww9l"; depends=[]; }; LPEadj = derive2 { name="LPEadj"; version="1.41.0"; sha256="0sjhx44m1rfkhpq87996wc7n8axz2k8c4ni818rx78cqpha5ybjl"; depends=[LPE]; }; + LRBaseDbi = derive2 { name="LRBaseDbi"; version="0.99.22"; sha256="0yvsj66hdxmw9nqysb0a7jih5fi8jp1fdaccrkjs7mkp3zz6hzpp"; depends=[AnnotationDbi Biobase DBI RSQLite]; }; LVSmiRNA = derive2 { name="LVSmiRNA"; version="1.31.0"; sha256="0wgjvy0r0p254kr686nnvjdwbqhbq06q1izy2idh9aaa043swaqn"; depends=[affy Biobase BiocGenerics limma MASS quantreg SparseM vsn zlibbioc]; }; - LedPred = derive2 { name="LedPred"; version="1.15.0"; sha256="1jbwxs9hcwqcm1dpn24jkq0xi8jyja9mq347frpn8vc1m08w4bjx"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; }; + LedPred = derive2 { name="LedPred"; version="1.15.1"; sha256="0h2rw9mx67ilcm61z1m2ddwpvq53rzvn1kbsgzqdszx0r63gfkxm"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; }; LineagePulse = derive2 { name="LineagePulse"; version="1.1.0"; sha256="00y0xcw89c1kdmcdj4pw620szrhxy2sykb7iblfbxz04cbj7vygs"; depends=[BiocParallel circlize ComplexHeatmap ggplot2 gplots knitr Matrix RColorBrewer SingleCellExperiment SummarizedExperiment]; }; Linnorm = derive2 { name="Linnorm"; version="2.5.0"; sha256="013i53zmjgrkb4icgzp9mdmn7wqfm8r24izm6vifigczqphm0g0i"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 gmodels igraph limma MASS mclust Rcpp RcppArmadillo Rtsne statmod vegan zoo]; }; LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.35.0"; sha256="0ggrhgdlw44k0q5nddn60m91225xx4c58ydjgd98b4rz4a0l9qjy"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; }; - Logolas = derive2 { name="Logolas"; version="1.5.0"; sha256="0h6pq0mp935ygm8pcnk4g9wxg9hcqnbssw6ar1kw59kcama062fs"; depends=[Biostrings ggplot2 gridBase LaplacesDemon SQUAREM]; }; + Logolas = derive2 { name="Logolas"; version="1.5.1"; sha256="14db1h5caklijdn0g4hk89n6h82fd932j9sxfzw2smhkg3k71xhw"; depends=[Biostrings ggplot2 gridBase LaplacesDemon SQUAREM]; }; LowMACA = derive2 { name="LowMACA"; version="1.11.2"; sha256="1ir6vfjiwjhi6hj6pzksh2wfrcsmhkd80zwc135md0gmxr5bhhw8"; depends=[BiocParallel Biostrings cgdsr data_table httr LowMACAAnnotation motifStack RColorBrewer reshape2 stringr]; }; - LymphoSeq = derive2 { name="LymphoSeq"; version="1.9.0"; sha256="0s0hwgbxdmkpdp6mnvd181idg0n3z87wf4w0arjih1205n1hqsyw"; depends=[Biostrings circlize data_table dplyr ggplot2 ggtree ineq LymphoSeqDB msa phangorn plyr RColorBrewer reshape stringdist UpSetR VennDiagram]; }; - M3C = derive2 { name="M3C"; version="1.3.3"; sha256="1h9f5syg4r435w5p5azgmyfmfaycqx0mmbs8jgz2hp3m04f8a967"; depends=[cluster dendextend doParallel doSNOW foreach ggplot2 Matrix matrixcalc NMF RColorBrewer Rtsne sigclust]; }; + LymphoSeq = derive2 { name="LymphoSeq"; version="1.9.2"; sha256="1q0xs2d7lgg0vz2ca84kv1igaf48y42g94xxdxmi1nmpz901pr8a"; depends=[Biostrings circlize data_table dplyr ggplot2 ggtree ineq LymphoSeqDB msa phangorn plyr RColorBrewer reshape stringdist UpSetR VennDiagram]; }; + M3C = derive2 { name="M3C"; version="1.3.991"; sha256="0wzg8rsfc1xgfdyl3l1y87cqvicpmj30ng45wfwp0d4vkd1llvqp"; depends=[cluster dendextend doParallel doSNOW foreach ggplot2 Matrix matrixcalc NMF RColorBrewer Rtsne sigclust survival]; }; M3D = derive2 { name="M3D"; version="1.15.0"; sha256="1fdfahbdfx3csn27q61djp27a2w6jr9yl9hw6rakjnj7mk5s1xrj"; depends=[BiocGenerics BiSeq GenomicRanges IRanges Rcpp S4Vectors SummarizedExperiment]; }; - M3Drop = derive2 { name="M3Drop"; version="1.7.0"; sha256="0w4vwlbaz68if7vanhr79nqg84cq9r60drrawc9c5c6gfcfzzjmz"; depends=[bbmle gplots numDeriv RColorBrewer statmod]; }; - MADSEQ = derive2 { name="MADSEQ"; version="1.7.0"; sha256="00x1nbvf375nik8v12hwpbnn84l70j5jycv8kp37fn18909100lh"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation vcfR VGAM zlibbioc]; }; - MAGeCKFlute = derive2 { name="MAGeCKFlute"; version="1.1.2"; sha256="03inn8i0pragrph3nia1zvkjd5kr3iz5ggj2i1fm6ir9259c7n01"; depends=[Category clusterProfiler data_table DOSE ggExtra ggplot2 ggrepel ggsci GOstats gridExtra pathological pathview pheatmap png RColorBrewer reshape sva]; }; + M3Drop = derive2 { name="M3Drop"; version="1.7.1"; sha256="1gscdkrnyk2qghkpidwj6abbxc53ivyxyc43297yja6hj73nz8mw"; depends=[bbmle gplots numDeriv RColorBrewer statmod]; }; + MACPET = derive2 { name="MACPET"; version="1.1.4"; sha256="0g9adhig02s6r45ax7335i2zsq8r2319111c0ijp6c6y5z52rcrp"; depends=[BH bigmemory BiocParallel Biostrings futile_logger GenomeInfoDb GenomicAlignments GenomicRanges GEOquery gtools InteractionSet intervals IRanges knitr plyr rbamtools Rbowtie Rcpp Rsamtools rtracklayer S4Vectors ShortRead]; }; + MADSEQ = derive2 { name="MADSEQ"; version="1.7.1"; sha256="1x8cfif8var04bdfgdws8zql33a67lf7r0kkalansy5w64wkjm8n"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation vcfR VGAM zlibbioc]; }; + MAGeCKFlute = derive2 { name="MAGeCKFlute"; version="1.1.9"; sha256="1bx9nawmjf2bsnk8iilplph90hdipyqf8mw24cbaaivajnsk6cz0"; depends=[biomaRt clusterProfiler data_table DOSE ggExtra ggplot2 ggrepel ggsci gridExtra pathview pheatmap png RColorBrewer sva]; }; MAIT = derive2 { name="MAIT"; version="1.15.0"; sha256="0z1wl9hxqcfy7nlwqccz244kljdjra58drlhjfvc38kiy4q7nsyg"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; }; MANOR = derive2 { name="MANOR"; version="1.53.2"; sha256="1ss77yxivvgv2nswdp5qbbjc21ghrnwvj3w33xj4zv79bdb92qga"; depends=[GLAD]; }; MAST = derive2 { name="MAST"; version="1.7.2"; sha256="07v6gjlh645w60c5fq206lmm2qpld1qqirdszrnrz00zrxzrnpz0"; depends=[abind Biobase BiocGenerics data_table ggplot2 plyr reshape2 S4Vectors SingleCellExperiment stringr SummarizedExperiment]; }; MBASED = derive2 { name="MBASED"; version="1.15.0"; sha256="19zn2xmarpiszs3jfmmlgc5nflc2gafbby3x68l38sich2jn1kix"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; }; MBAmethyl = derive2 { name="MBAmethyl"; version="1.15.0"; sha256="19lgv7lcy5qc6xbsngqvfxbaqcyk3rz907983ngqa9magr7xy2r1"; depends=[]; }; MBCB = derive2 { name="MBCB"; version="1.35.0"; sha256="0cmmyj0c13b47apdk04qqqfg35rywh5fa0d2inhi31lfvbfd8bcx"; depends=[preprocessCore tcltk2]; }; - MBttest = derive2 { name="MBttest"; version="1.9.1"; sha256="1m99zma2zg070sr759y8gkmm1qwnswqapbhl175xf8kxma1gh4cb"; depends=[gplots gtools]; }; + MBttest = derive2 { name="MBttest"; version="1.9.3"; sha256="1g443ynnk46blficdzygnksirfnwwgggl6d2j0jw0qfvkdsks2bz"; depends=[gplots gtools]; }; MCRestimate = derive2 { name="MCRestimate"; version="2.37.0"; sha256="1b1cp4aan1wnzspihjm2snp16qjd3flr3ixx19mvsqzy5p38pf69"; depends=[Biobase e1071 golubEsets pamr randomForest RColorBrewer]; }; MCbiclust = derive2 { name="MCbiclust"; version="1.5.0"; sha256="1zkxh6gax7rnp6n5dd6kwcljwds33fv5ps4crn41hzndllpbbc93"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; }; MDTS = derive2 { name="MDTS"; version="1.1.2"; sha256="0q3v06za1wdkrzp711gs7awpk4dvrxj0xy6m5lzjyjz5qdd2nym5"; depends=[Biostrings DNAcopy GenomicAlignments GenomicRanges IRanges Rsamtools stringr]; }; - MEAL = derive2 { name="MEAL"; version="1.11.3"; sha256="04s5gqmn2gd399ba7gj9968d5ryisi6hl7n75mrgns5zq7mb3q7s"; depends=[Biobase BiocGenerics DMRcate GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl permute S4Vectors SmartSVA SummarizedExperiment vegan]; }; - MEDIPS = derive2 { name="MEDIPS"; version="1.33.0"; sha256="0c37ns7z4wgir91lhz36035nvp1vc886fardjn2p74bz5w90w16x"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; + MEAL = derive2 { name="MEAL"; version="1.11.7"; sha256="11l3rbfwnh8yrbi33ii0mcmi63wgmhdwyffx8790gm3dj99l1626"; depends=[Biobase BiocGenerics DMRcate GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl MultiDataSet permute S4Vectors SmartSVA SummarizedExperiment vegan]; }; + MEDIPS = derive2 { name="MEDIPS"; version="1.33.3"; sha256="0a2jypw2k9kpdh86gvgchvqlww72gb55aw9vhz67dkd7mfwnsqyc"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; }; MEDME = derive2 { name="MEDME"; version="1.41.0"; sha256="1l0i3vz1zp9lmvvfn5h6baf9kzvdyb9m1qffwlg3dvzdzdqadx0l"; depends=[Biostrings drc MASS]; }; - MEIGOR = derive2 { name="MEIGOR"; version="1.15.0"; sha256="0ch31d8g993ikz7dklzfh9mfn1cv8wv7k3nihdspqvbm37m8c0v1"; depends=[CNORode deSolve Rsolnp snowfall]; }; - MGFM = derive2 { name="MGFM"; version="1.15.0"; sha256="08qgxz6aglxgzrbmxmay1xg402vw0a4yp86ifb5p0bwaniiv6k72"; depends=[annotate AnnotationDbi]; }; + MEIGOR = derive2 { name="MEIGOR"; version="1.15.1"; sha256="1vfklcm9yppy3rr2l5ddnp20r368hsr08vy26agr5jqharw7qik9"; depends=[CNORode deSolve Rsolnp snowfall]; }; + MGFM = derive2 { name="MGFM"; version="1.15.1"; sha256="1pd7c9d66c4b1bz6l24mhrwxwdivl47kc57c7mp79z1h9hf66ipf"; depends=[annotate AnnotationDbi]; }; MGFR = derive2 { name="MGFR"; version="1.7.0"; sha256="11vw9yyv6j2pjj4cmlw0f3blxz4iwx3p9r0xpzis5zs12x7pn17f"; depends=[annotate biomaRt]; }; - MIGSA = derive2 { name="MIGSA"; version="1.5.0"; sha256="1n4gh139cp05ahqjd3hyj2pzj9p0pyqhbwhsyg208mlm1arkdyxg"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase ismev limma matrixStats org_Hs_eg_db RBGL reshape2 Rgraphviz RJSONIO vegan]; }; + MIGSA = derive2 { name="MIGSA"; version="1.5.2"; sha256="02yqj1srxh41wmda686y0nh88rnvmffr5f6p46h7vmz8kb1pi9cf"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase ismev limma matrixStats org_Hs_eg_db RBGL reshape2 Rgraphviz RJSONIO vegan]; }; MIMOSA = derive2 { name="MIMOSA"; version="1.19.0"; sha256="1z3hj0ivv4zw4sprzr5bhxp5fpzkg37m1sk1y90cfm42p4vyqagg"; depends=[Biobase coda data_table Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape scales testthat]; }; - MIRA = derive2 { name="MIRA"; version="1.3.0"; sha256="0wsgpmig3vz0iy7395a8091n5w5s5xmi709bd5pppdqw2zwhnmn6"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; }; + MIRA = derive2 { name="MIRA"; version="1.3.1"; sha256="139wlx2c0bpgljjxrzrcn7s8kvqrs53lrw6nsdnb3v4y7wx2fc8y"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; }; MLInterfaces = derive2 { name="MLInterfaces"; version="1.61.1"; sha256="1nmcxaa3r34xhzcs063pwggck2yhwvc1ckzyhqabbb41jflnnw3g"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter MASS mlbench pls RColorBrewer rda rpart sfsmisc shiny threejs]; }; MLP = derive2 { name="MLP"; version="1.29.0"; sha256="0fqrpnqb9031f3y1qgmvxr0ynygp1rzjg2dsy4g2z98jzwbncznk"; depends=[affy AnnotationDbi gdata gmodels gplots gtools plotrix]; }; - MLSeq = derive2 { name="MLSeq"; version="1.99.8"; sha256="1h72lhvrvkpbl5dil3gk2kw6ax3xpycp87511a5ndzagnl2499js"; depends=[Biobase caret DESeq2 edgeR foreach ggplot2 limma plyr sSeq SummarizedExperiment xtable]; }; + MLSeq = derive2 { name="MLSeq"; version="1.99.9"; sha256="0bjgj44j6xxipp6wskd1cq3kj2j9g3jl8365r9rv5m8vp58nvkl2"; depends=[Biobase caret DESeq2 edgeR foreach ggplot2 limma plyr sSeq SummarizedExperiment xtable]; }; MMDiff2 = derive2 { name="MMDiff2"; version="1.9.0"; sha256="1l3frx6myj4jglypv5il3pgjpm3szq5xfp5p8k8xilahmg98ykh1"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; }; MODA = derive2 { name="MODA"; version="1.7.0"; sha256="0wm5sc2fh5j191128xlxdqmfsh8ix8k33gkcz6yn8rfpj3rdfhzg"; depends=[AMOUNTAIN cluster dynamicTreeCut igraph RColorBrewer WGCNA]; }; MPFE = derive2 { name="MPFE"; version="1.17.0"; sha256="1jalc9ny5lv3h7awrkg5mmagjh15js5rmpqfl7pn15499186fajp"; depends=[]; }; - MSGFgui = derive2 { name="MSGFgui"; version="1.15.0"; sha256="198lczhpgjlv0mq1k4rch4fm0gjm7g65j108ib69n5zbzkcqgbri"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; }; - MSGFplus = derive2 { name="MSGFplus"; version="1.15.0"; sha256="19b61p8ihxni4psfrc7akgrq6aq28wzf73zp0bizwqfkv4lphm7l"; depends=[mzID ProtGenerics]; }; - MSnID = derive2 { name="MSnID"; version="1.15.0"; sha256="167hjrp9zsa84swbrkmjaxc0haza02qzzfg64855rrf0m319g0v0"; depends=[Biobase data_table doParallel dplyr foreach iterators MSnbase mzID mzR ProtGenerics R_cache Rcpp reshape2]; }; - MSnbase = derive2 { name="MSnbase"; version="2.7.1"; sha256="0gc1hysdd3ng6a0n3fqidrwgm2b3x4mlrccrxba5ank312i6f5iq"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant MASS mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp S4Vectors scales vsn XML]; }; - MSstats = derive2 { name="MSstats"; version="3.13.4"; sha256="0vc36h2s1xmird1ghadw0v9r12gxh73xjmgbclfydg0q4i0x6762"; depends=[data_table doSNOW dplyr foreach ggplot2 ggrepel gplots limma lme4 marray MASS minpack_lm preprocessCore randomForest reshape2 snow stringr survival tidyr]; }; - MSstatsQC = derive2 { name="MSstatsQC"; version="1.3.0"; sha256="1sp72cpks1cw3h6j9lzscs9lf9s9gl092h3jnxixkzf44cjlbxah"; depends=[dplyr ggExtra ggplot2 MSnbase plotly qcmetrics RecordLinkage]; }; - MSstatsQCgui = derive2 { name="MSstatsQCgui"; version="1.1.0"; sha256="1cr6l6axi7cqqb547dhsha7zdn85grgvvq2436skxws172pl0pv3"; depends=[dplyr ggExtra gridExtra MSstatsQC plotly RecordLinkage shiny]; }; + MPRAnalyze = derive2 { name="MPRAnalyze"; version="0.99.11"; sha256="0vqy590j0jfx00lifmavdvl6bd93k85kpm67575z3hd7lffrmawm"; depends=[BiocParallel progress SummarizedExperiment]; }; + MSGFgui = derive2 { name="MSGFgui"; version="1.15.1"; sha256="01mdpd0ph49zjvhynb4cq8m60k1bd4xw72bay2ly19akp72lwcpz"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; }; + MSGFplus = derive2 { name="MSGFplus"; version="1.15.1"; sha256="15ljj766719690mb37alih2001vcm8az92j0qgyfdb80c9gm8my6"; depends=[mzID ProtGenerics]; }; + MSnID = derive2 { name="MSnID"; version="1.15.1"; sha256="08z17czddqlfj6hppqg43s45ldh3ck6qay14iyrpsa809xqda1yw"; depends=[Biobase data_table doParallel dplyr foreach iterators MSnbase mzID mzR ProtGenerics R_cache Rcpp reshape2]; }; + MSnbase = derive2 { name="MSnbase"; version="2.7.12"; sha256="15vs3dca3ml859005wpwk84c0d1si0h65g9hnkvd0nw05wsp7g81"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant MASS mzID mzR pcaMethods plyr preprocessCore ProtGenerics Rcpp S4Vectors scales vsn XML]; }; + MSstats = derive2 { name="MSstats"; version="3.13.5"; sha256="06rhwn9fk5dr52p73mxi04x86s1c8ixvw3kw01qxygd6x0acshy4"; depends=[data_table doSNOW dplyr foreach ggplot2 ggrepel gplots limma lme4 marray MASS minpack_lm preprocessCore randomForest reshape2 snow stringr survival tidyr]; }; + MSstatsQC = derive2 { name="MSstatsQC"; version="1.99.3"; sha256="1rbkn12pgy8g6s15lizaymkbc5k5cb07gndzy65w0zsbm2w5vaz4"; depends=[dplyr ggExtra ggplot2 MSnbase plotly qcmetrics RecordLinkage]; }; + MSstatsQCgui = derive2 { name="MSstatsQCgui"; version="1.1.1"; sha256="0s3invrc3601y8hai3pxbd1k0v6vvr7n95zpbxj5cjqdv3yn52ir"; depends=[dplyr ggExtra gridExtra MSstatsQC plotly RecordLinkage shiny]; }; + MSstatsTMT = derive2 { name="MSstatsTMT"; version="0.99.9"; sha256="08plgvwwhrjyby45gq5s4b3nxb53az6dayhgsk96fhxa3q7dbmds"; depends=[data_table dplyr ggplot2 limma lme4 matrixStats MSstats nlme reshape2 tidyr]; }; MVCClass = derive2 { name="MVCClass"; version="1.55.0"; sha256="0xkwwvq66cnmac52ik95siq78ny9nfbgp4xncdamq7gmn7wasacr"; depends=[]; }; - MWASTools = derive2 { name="MWASTools"; version="1.5.1"; sha256="015zdbmxlpv9y2qsg6ny59ljy8cn2vz4grmwa8dragr7pmivqikf"; depends=[boot car ComplexHeatmap ggplot2 glm2 gridExtra igraph KEGGgraph KEGGREST ppcor qvalue RCurl SummarizedExperiment]; }; + MWASTools = derive2 { name="MWASTools"; version="1.5.6"; sha256="1axhfzvinhg8lfgn703rl76bxj0b1dz0rmiapssqvzzm6bg8lgmf"; depends=[boot car ComplexHeatmap ggplot2 glm2 gridExtra igraph KEGGgraph KEGGREST ppcor qvalue RCurl SummarizedExperiment]; }; MantelCorr = derive2 { name="MantelCorr"; version="1.51.0"; sha256="03sqqfi06hcprya25aj3p9sa35x9n2m9ffnplnh6gqmcv22fj75k"; depends=[]; }; MassArray = derive2 { name="MassArray"; version="1.33.0"; sha256="1ni7dw8lk73n3b19m0rnd8cszb4p6la6msld0z63lgvih4m3z805"; depends=[]; }; MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.47.0"; sha256="0mq6xfdj11m49xi6x14lp6kh9idfbrmy9kx7jpjm90hwdjnl48ym"; depends=[waveslim]; }; MatrixRider = derive2 { name="MatrixRider"; version="1.13.0"; sha256="0plcabv6wc7s4q7ippi7i9ckc3lg4pwxdm32gpsmmssff37jx41c"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; }; - MaxContrastProjection = derive2 { name="MaxContrastProjection"; version="1.5.0"; sha256="10hdj1kb9ywwgzf7nj7hzmh2hr5si6ps0h120nkdjmjscyd2sw26"; depends=[EBImage]; }; - MeSHDbi = derive2 { name="MeSHDbi"; version="1.17.0"; sha256="1m73m7dgcl1n2rgb8c8qar65w18b1qq42n458yw3di88xly6wmb3"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; }; + MaxContrastProjection = derive2 { name="MaxContrastProjection"; version="1.5.1"; sha256="1ybz5ij152pdbnn47p5sprlm8lzdgzazv0h890dbh9z3k9b7vbli"; depends=[EBImage]; }; + MeSHDbi = derive2 { name="MeSHDbi"; version="1.17.1"; sha256="1qxbpvl97j187bl9nqib6z580f692apdrsdw8qlpk1lw197sv7np"; depends=[AnnotationDbi Biobase BiocGenerics RSQLite]; }; MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.53.0"; sha256="0j6v368naid00b1igibjp94yxyz0sqhsr8lxgxv0xwy85ivsqlbi"; depends=[]; }; MergeMaid = derive2 { name="MergeMaid"; version="2.53.0"; sha256="1dn5shrkyhph13x5qyygvp10jd8acs6rka9vr3g9dh0rq4mx4114"; depends=[Biobase MASS survival]; }; - Mergeomics = derive2 { name="Mergeomics"; version="1.9.0"; sha256="1qs7jcgg5ah2iw6lcfwnp9lag5cah0d0gg9jk2qhrnqi22cjrymf"; depends=[]; }; - MetCirc = derive2 { name="MetCirc"; version="1.11.0"; sha256="1v37sbd1c3m5mqyqlm7jcv1dascwwb1m9fm1cr2rn8r2whi9yfib"; depends=[amap circlize scales shiny]; }; - MetaCyto = derive2 { name="MetaCyto"; version="1.3.2"; sha256="19kvmrzfakyjavd0y6j2ixzmlm070fdz6sygn0vczpdkqmir5vqd"; depends=[cluster fastcluster flowCore FlowSOM ggplot2 metafor tidyr]; }; + Mergeomics = derive2 { name="Mergeomics"; version="1.9.1"; sha256="0gz7vx1gvng7dlkwfz45i1cpsdhazv9w5idbxjsh3rxwpll4yvd5"; depends=[]; }; + MetCirc = derive2 { name="MetCirc"; version="1.11.3"; sha256="12f9cj5wzavd51kbyiz380fhb2zrlybakm4z7rnpvcx0g8q7l3y3"; depends=[amap circlize scales shiny]; }; + MetID = derive2 { name="MetID"; version="0.99.8"; sha256="196ha93x99p7dhhwnr4b4xddkjjw2m1q30bn238msndz4l5chmri"; depends=[ChemmineR devtools igraph Matrix stringr]; }; + MetNet = derive2 { name="MetNet"; version="0.99.24"; sha256="15gqzi23r7g43awk67qnqxlpgyq0zb9z06gq60kd0j05pwhfpgqz"; depends=[BiocParallel bnlearn mpmi parmigene ppcor rfPermute sna stabs WGCNA]; }; + MetaCyto = derive2 { name="MetaCyto"; version="1.3.4"; sha256="0j97f77ailb5ih6ky3svcf7lmr6qk352p59mbx7rcxgg7fdajc0l"; depends=[cluster fastcluster flowCore FlowSOM ggplot2 metafor tidyr]; }; MetaNeighbor = derive2 { name="MetaNeighbor"; version="1.1.0"; sha256="1jj4jh27ysl3ilhw20pf1srw0n47c0dbc3s760blwbf5qnrlhivv"; depends=[beanplot gplots RColorBrewer SummarizedExperiment]; }; Metab = derive2 { name="Metab"; version="1.15.0"; sha256="12l43jyrsq1dcbbrkr6k66hrcwkx8ynyniz3cfs17im09nrj20jz"; depends=[pander svDialogs xcms]; }; - MetaboSignal = derive2 { name="MetaboSignal"; version="1.11.0"; sha256="0cpmbq55d7bf9mky0m0ydg1qs60sxq8wl2apkhvnyfhifv3f316q"; depends=[AnnotationDbi biomaRt EnsDb_Hsapiens_v75 hpar igraph KEGGgraph KEGGREST MWASTools org_Hs_eg_db RCurl]; }; - MethPed = derive2 { name="MethPed"; version="1.9.0"; sha256="0xi7s75ph09xi8f57hnmlfzr4xazj875wqc98dr198r5985sl99v"; depends=[Biobase randomForest]; }; + MetaboSignal = derive2 { name="MetaboSignal"; version="1.11.0"; sha256="0cpmbq55d7bf9mky0m0ydg1qs60sxq8wl2apkhvnyfhifv3f316q"; depends=[AnnotationDbi biomaRt EnsDb_Hsapiens_v75 hpar igraph KEGGgraph KEGGREST MWASTools mygene org_Hs_eg_db RCurl]; }; + MethPed = derive2 { name="MethPed"; version="1.9.1"; sha256="0x83lz61vn74z9nps99a0f8jh34impkm1523wzp0gr24gcmikb8y"; depends=[Biobase randomForest]; }; MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.13.0"; sha256="02kc184ql68rqll95sza94qnzjgh8wvg76h3z5r3lqmxdd7bblz9"; depends=[Biostrings gplots seqinr stringr]; }; MethylAid = derive2 { name="MethylAid"; version="1.15.0"; sha256="15xkcbjj7mcmbm5di1bxslfiipnbdarsfsg16kmd530v9lmll331"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny SummarizedExperiment]; }; - MethylMix = derive2 { name="MethylMix"; version="2.11.0"; sha256="1lm88i5b03i08s4dydmw7jjxp5qpn5nz72by74nqzc36m6ignk8k"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; }; - MethylSeekR = derive2 { name="MethylSeekR"; version="1.21.0"; sha256="0zpd930n3vyv94yic8zjfgl68m3kr4z35ab5lzprjmpyy8hg7szn"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; }; + MethylMix = derive2 { name="MethylMix"; version="2.11.2"; sha256="02wsil0s5jp6lh4jlh9sppz9ir8lk849jlxagj48s9napxbw65fc"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; }; + MethylSeekR = derive2 { name="MethylSeekR"; version="1.21.1"; sha256="18hcd43z15949vsd7s02zg85dpyf9gkc7dky70xz8jv8gbmizl56"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; }; Mfuzz = derive2 { name="Mfuzz"; version="2.41.0"; sha256="0hdjkg90kk7igjx26hfm9wfh7lymm0cgxsn263a7sy1cb6ld7nx8"; depends=[Biobase e1071 tkWidgets]; }; MiChip = derive2 { name="MiChip"; version="1.35.0"; sha256="19w0kzyg6s950g0p4a4gdkkblsz30zv57rs3dqzqh1rgcrcb4gpf"; depends=[Biobase]; }; MiPP = derive2 { name="MiPP"; version="1.53.0"; sha256="0ii5vlx5gwkz01ivg0qjml8q5zqdvz21rrxgqhx2zdqwi6cbfww0"; depends=[Biobase e1071 MASS]; }; - MiRaGE = derive2 { name="MiRaGE"; version="1.23.0"; sha256="1inywp84lh8qwairxrb8cvql171mg4jrg66aqg0nhihqm0mjwnn5"; depends=[AnnotationDbi Biobase BiocGenerics S4Vectors]; }; + MiRaGE = derive2 { name="MiRaGE"; version="1.23.3"; sha256="02nrjckzywcfm0b34f076qkpsaa9n6p57pjd9chhcnns0i7kl2ji"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager S4Vectors]; }; MineICA = derive2 { name="MineICA"; version="1.21.0"; sha256="1n711vz5g1rrz6hnm88w3ycm0yczq4a0h2rg635g7x33sszjr3dk"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; }; + MinimumDistance = derive2 { name="MinimumDistance"; version="1.25.2"; sha256="1pv6h2p0y6r32dz99b61bdgyd86nnmzs7dph9xk7a5rrgzaj1bb8"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; }; Mirsynergy = derive2 { name="Mirsynergy"; version="1.17.0"; sha256="0n8vspalfwisnfk486i90pxi2hd2xi32b36pfl3ifrpqyr2rylix"; depends=[ggplot2 gridExtra igraph Matrix RColorBrewer reshape scales]; }; MmPalateMiRNA = derive2 { name="MmPalateMiRNA"; version="1.31.0"; sha256="10cdaprs899j3fswds8vx4gm2xp5kcx11l53ymxlyjr5592887fm"; depends=[Biobase lattice limma statmod vsn xtable]; }; - MoPS = derive2 { name="MoPS"; version="1.15.0"; sha256="0bmxwf1i2szan2wn4gxmf4qskrsaydkkrbg7agmgzgbzhvb47dgs"; depends=[Biobase]; }; - MoonlightR = derive2 { name="MoonlightR"; version="1.7.1"; sha256="040hkp66mr432762wkwyyhxpsqqrhkri06szl7wyfpmf3gmydj9i"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; }; + MoPS = derive2 { name="MoPS"; version="1.15.1"; sha256="0nmk4iapypdak2z4zmlwv2crvgzh10l8vvajkiszwakdpsc734fd"; depends=[Biobase]; }; + MoonlightR = derive2 { name="MoonlightR"; version="1.7.2"; sha256="1j2k09hcg5z65yxaml6yhxffsz3dmh56j64w625rqxmfk0b1zyii"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; }; MotIV = derive2 { name="MotIV"; version="1.37.0"; sha256="0wzf7dzw063i613gx8pa3sf1hvqc52yhb8dqpy87g3smalfj3qr3"; depends=[BiocGenerics Biostrings IRanges lattice rGADEM S4Vectors]; }; - MotifDb = derive2 { name="MotifDb"; version="1.23.0"; sha256="1s0191bn7418bkl5zha6a99wnznznrndk13z8jhzjcpp4kk6m1f7"; depends=[BiocGenerics Biostrings IRanges rtracklayer S4Vectors splitstackshape]; }; + MotifDb = derive2 { name="MotifDb"; version="1.23.14"; sha256="0v7n0682w9gsnp7vknhwfc6baimsjcqb5gm3bglnsp6kr4khjhkx"; depends=[BiocGenerics Biostrings IRanges rtracklayer S4Vectors splitstackshape]; }; Mulcom = derive2 { name="Mulcom"; version="1.31.0"; sha256="0l8wn2ma3s55w86wv3779y39vsp45rfa5nkjj1cjn26qc2ay0r0f"; depends=[Biobase fields]; }; - MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.7.14"; sha256="1wwi9dgf41zvkv2zkrx6wvk15zhml618mz3ki7gzshzp3p9wxwr7"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors SummarizedExperiment tidyr]; }; + MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.7.22"; sha256="1pw80vr48jii32mxd8rwshi3q6ccr4c3x3fr0bxdkbf9ypa2l57j"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors SummarizedExperiment tidyr]; }; + MultiDataSet = derive2 { name="MultiDataSet"; version="1.9.1"; sha256="19j4jd5gh363l6p3jmjfcp14y1vmixg20lcpqjs78zxk1saalhz3"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggrepel IRanges limma qqman S4Vectors SummarizedExperiment]; }; MultiMed = derive2 { name="MultiMed"; version="2.3.0"; sha256="085vmkq1hd9x1za5c21gvndyl46ymd7w5hwixvhnsclzb4r7gav7"; depends=[]; }; - MutationalPatterns = derive2 { name="MutationalPatterns"; version="1.7.0"; sha256="1iy96za3b31sm9kkbg6vf17a88pyhdk580yrhl580ggwjjkn3fz6"; depends=[BiocGenerics Biostrings cowplot GenomeInfoDb GenomicRanges ggdendro ggplot2 IRanges NMF plyr pracma reshape2 S4Vectors SummarizedExperiment VariantAnnotation]; }; - NADfinder = derive2 { name="NADfinder"; version="1.5.0"; sha256="0wjnfi09d686ypifgqrn191hh8xgv7m87fnak84ss5ka9lwhii54"; depends=[ATACseqQC baseline BiocGenerics corrplot csaw EmpiricalBrownsMethod GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma metap Rsamtools rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; }; + MutationalPatterns = derive2 { name="MutationalPatterns"; version="1.7.3"; sha256="1krq37chmnqzl9dlk6dwjy6kasa511s2qc8hndg5l0am12lmn5bg"; depends=[BiocGenerics Biostrings cowplot GenomeInfoDb GenomicRanges ggdendro ggplot2 IRanges NMF plyr pracma reshape2 S4Vectors SummarizedExperiment VariantAnnotation]; }; + NADfinder = derive2 { name="NADfinder"; version="1.5.4"; sha256="0qgnpq9ci3344kjba8jfs6lbnrdhsyjvb5vxrd0p4v08j3fg4q55"; depends=[ATACseqQC baseline BiocGenerics corrplot csaw EmpiricalBrownsMethod GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma metap rbamtools Rsamtools rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; }; + NBSplice = derive2 { name="NBSplice"; version="0.99.9"; sha256="181msya2wpcqsn3xyiqzghl58r394ilw5khmzihyq5b1bq3x7rmr"; depends=[BiocParallel car edgeR ggplot2 MASS mppa reshape2]; }; NCIgraph = derive2 { name="NCIgraph"; version="1.29.0"; sha256="06jmifga56d9cnqp4wb9hm6g32fhsk6n0g70qqw1k4l5k7m2v5wv"; depends=[graph KEGGgraph R_methodsS3 RBGL RCy3]; }; - NGScopy = derive2 { name="NGScopy"; version="1.15.0"; sha256="1b8190zyq3sixmvg9kw7jshxsyb2zicfm0w6qfgah0aq9jgb9gxz"; depends=[changepoint rbamtools Xmisc]; }; - NOISeq = derive2 { name="NOISeq"; version="2.25.0"; sha256="18hz9g1p1kacb1f4b3sxfrp1gl6wk87p20d5580krrqk9a69al2n"; depends=[Biobase Matrix]; }; + NGScopy = derive2 { name="NGScopy"; version="1.15.1"; sha256="0azw7zq7bz7haifmng9y59jbhh7nfhz6k886gffdvlnbrn3k4kbr"; depends=[changepoint rbamtools Xmisc]; }; + NOISeq = derive2 { name="NOISeq"; version="2.25.1"; sha256="094jrp87nhjyi31qbg719ny0dqki5blf6k86d4sbh3vqngakcjg3"; depends=[Biobase Matrix]; }; NTW = derive2 { name="NTW"; version="1.31.0"; sha256="183y8sqf3h4ik1cm6zhvzmijc8kanmv3lvqh4v4cb7qhvgrgb3ln"; depends=[mvtnorm]; }; NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.11.0"; sha256="0sl0chkrx8s4625ch43x9r8n5k7cd0y18cinafrligqfrwnc5yx0"; depends=[Biobase matrixStats Rcpp]; }; NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.13.0"; sha256="1km8i428rn4q5b89d56bcnwkrpvhf67bzmxwzxfdwm1qr956vab2"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; }; NarrowPeaks = derive2 { name="NarrowPeaks"; version="1.25.1"; sha256="1lqs0rcx52c3hnx89wngmyyhn02a7nf007x95z85rqzrclgy27ki"; depends=[BiocGenerics CSAR fda GenomeInfoDb GenomicRanges ICSNP IRanges S4Vectors]; }; - NetPathMiner = derive2 { name="NetPathMiner"; version="1.17.0"; sha256="0p6syyn31nfx3qgw8yv6m7jry2prnjnf6pc9qf889407438q11cf"; depends=[igraph]; }; - NetSAM = derive2 { name="NetSAM"; version="1.21.0"; sha256="15crfdd8a7wlmn3vmwqxzfihaph64lay7k75dx5mjwswp01w5g37"; depends=[graph igraph seriation]; }; - NormqPCR = derive2 { name="NormqPCR"; version="1.27.0"; sha256="1481sv255pq76scmbwvw66blknww2w8d9c4md4gmsgkifwnwvqjf"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; }; + NeighborNet = derive2 { name="NeighborNet"; version="0.99.5"; sha256="1xwpzkfmhgiswwyls5q9cm8qnz7xvp3axhm95cvwfqxwbp8j81mc"; depends=[graph]; }; + NetPathMiner = derive2 { name="NetPathMiner"; version="1.17.1"; sha256="0hfdi6359vl27m5fa8fr9pr4xw8pqdx3qjbw6laigylapn8vwy6n"; depends=[igraph]; }; + NetSAM = derive2 { name="NetSAM"; version="1.21.1"; sha256="0h1wld8p7pvyf7jfgcdgykg34dccf7ykrfc7jqv0i5aip4zjxpd0"; depends=[graph igraph seriation]; }; + NormalyzerDE = derive2 { name="NormalyzerDE"; version="0.99.25"; sha256="00x86np9265klpvzv72xcdnnqfkaa1ygja4hrlpx3iaz9r2x3k4z"; depends=[ape Biobase car ggplot2 limma MASS matrixStats preprocessCore raster RcmdrMisc SummarizedExperiment vsn]; }; + NormqPCR = derive2 { name="NormqPCR"; version="1.27.2"; sha256="18bsw0hp7m48vh85ajyxhp447agrzhs5x0jy4684p77xrlhqfmqz"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; }; NuPoP = derive2 { name="NuPoP"; version="1.31.0"; sha256="1sfv98q0z3x5lzmvhbjh1k65flxhsjfx5nqhlhhihcs5rjx8pa3h"; depends=[]; }; OCplus = derive2 { name="OCplus"; version="1.55.0"; sha256="0nn2adv9v0j0dhz93kd2d3bh1fx31vg3qk9sygrf1xbwqppmcyp9"; depends=[akima multtest]; }; OGSA = derive2 { name="OGSA"; version="1.11.0"; sha256="063y4bzxiwjb0nvh3lkkgd39p59sy9drzcckpkxm5yxm3scrdy2f"; depends=[Biobase gplots limma]; }; OLIN = derive2 { name="OLIN"; version="1.59.0"; sha256="0q0cr7yfprvzl01dgb4mwpbwnj1yfpn4myf8jksckiy0s2cwinra"; depends=[limma locfit marray]; }; OLINgui = derive2 { name="OLINgui"; version="1.55.0"; sha256="1wjsb9h443d82x6vq70plhv7cgc3n7imvjlian1a0hd9dbcx9ss3"; depends=[marray OLIN tkWidgets widgetTools]; }; - OPWeight = derive2 { name="OPWeight"; version="1.3.0"; sha256="1jjpz8inwfwpky316l61lka8g0dp69qr8kbgi6g54f0y0kjcq5fa"; depends=[MASS qvalue tibble]; }; - ORFik = derive2 { name="ORFik"; version="1.1.0"; sha256="03fv9dr9jpzavrnbjd1pp6jlbi5i3sbg6zbi3p7z95rm8j1cds6x"; depends=[Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rcpp Rsamtools rtracklayer S4Vectors]; }; + OMICsPCA = derive2 { name="OMICsPCA"; version="0.99.17"; sha256="1na9swmy7z5xnbvp7h2x6s1jgdhifwdh36ad7g7jlhfc7v8a3kqh"; depends=[cluster clValid corrplot cowplot data_table factoextra FactoMineR fpc GenomeInfoDb ggplot2 HelloRanges IRanges kableExtra magick MASS MultiAssayExperiment NbClust OMICsPCAdata pdftools PerformanceAnalytics reshape2 rgl rmarkdown rtracklayer tidyr]; }; + OPWeight = derive2 { name="OPWeight"; version="1.3.1"; sha256="17xrv1ad4wv20q4lwgxpr58sn73klx165h2pvjwly8v68hx1713s"; depends=[MASS qvalue tibble]; }; + ORFik = derive2 { name="ORFik"; version="1.1.14"; sha256="1cq43ha9brllyn1p72978xcvb45iapkz2hsfh6anbh4xdhv9pbxg"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rcpp Rsamtools rtracklayer S4Vectors]; }; OSAT = derive2 { name="OSAT"; version="1.29.0"; sha256="174jna1bl6vkbr3zypyfnhakfm7bm6llfcgghr4m9bvc8a6hxq6b"; depends=[]; }; OTUbase = derive2 { name="OTUbase"; version="1.31.0"; sha256="0p86dn54pipqy3v74iwgvs2xqxypq6iq58y9m0pqbncryrszcs0p"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; }; - OmaDB = derive2 { name="OmaDB"; version="1.1.1"; sha256="1y2xflz6cbdhxsyd0nx131amxmq4jjfcgma34vrl6jzl9y9l96ga"; depends=[ape Biostrings GenomicRanges httr IRanges plyr topGO]; }; + OUTRIDER = derive2 { name="OUTRIDER"; version="0.99.31"; sha256="1wihfldpj8hq86z9ln5c06rr5kv8cjx5bmcqz5cx58vxg3sr86h4"; depends=[BBmisc Biobase BiocGenerics BiocParallel data_table DESeq2 GenomicFeatures GenomicRanges ggplot2 ggpubr gplots IRanges matrixStats pcaMethods plotly plyr PRROC RColorBrewer Rcpp RcppArmadillo reticulate S4Vectors scales SummarizedExperiment]; }; + OmaDB = derive2 { name="OmaDB"; version="1.1.4"; sha256="192wpb9f7vwkrlq2y2r7kicppqc5c9hb7nk00im06588mdldbp4p"; depends=[ape Biostrings GenomicRanges httr IRanges jsonlite plyr topGO]; }; OmicCircos = derive2 { name="OmicCircos"; version="1.19.0"; sha256="03laa1vjjxgrpcz2sxdq9dq0fa2s04jvf56q03h5gx8hkfn4rv7v"; depends=[GenomicRanges]; }; - OmicsMarkeR = derive2 { name="OmicsMarkeR"; version="1.13.0"; sha256="1fqmyfpjmpx3ihbvf5w15v48w2zbkx8iyyajc9gpsb033abzl3fm"; depends=[assertive assertive_base caret caTools data_table DiscriMiner e1071 foreach gbm glmnet pamr permute plyr randomForest]; }; - Onassis = derive2 { name="Onassis"; version="1.3.0"; sha256="1smj5ii8mblmkg1p8ssi5xq5aqa13nl7fc0nlpbflv3cpssimzjs"; depends=[AnnotationDbi data_table GEOmetadb OnassisJavaLibs RCurl rJava RSQLite]; }; - OncoScore = derive2 { name="OncoScore"; version="1.9.0"; sha256="0ckcnhr5f6lcarg6zjyszmf5yl6gw1g09j6jnqq87pk9g7nsi3n6"; depends=[biomaRt]; }; - OncoSimulR = derive2 { name="OncoSimulR"; version="2.11.0"; sha256="02kbkpjkpi3srxgz8jcyk1dhsc2q19ghbd3p160v2sf966g1286d"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph nem RColorBrewer Rcpp Rgraphviz smatr]; }; + OmicsMarkeR = derive2 { name="OmicsMarkeR"; version="1.13.1"; sha256="0fx2jjyn196344indfpdiaf63abvxm1rw7ris378rzpl282kch2m"; depends=[assertive assertive_base caret caTools data_table DiscriMiner e1071 foreach gbm glmnet pamr permute plyr randomForest]; }; + Onassis = derive2 { name="Onassis"; version="1.3.7"; sha256="11ifi7bsdy6yrgs54pglaqhgw86zndn98qhygzkw7sxgb8b7ly18"; depends=[AnnotationDbi data_table DT GEOmetadb knitr OnassisJavaLibs RCurl rJava RSQLite]; }; + OncoScore = derive2 { name="OncoScore"; version="1.9.3"; sha256="07pvd6alsbvm4wjlz3m3dnl0hyzv33fvznzxhcsgh1sz2kv92aya"; depends=[biomaRt]; }; + OncoSimulR = derive2 { name="OncoSimulR"; version="2.11.1"; sha256="1nkwfc2gcmfn8pnz6zk7bywr1n75jrrfyhmbj0mzzhp4cjxsrj8d"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph nem RColorBrewer Rcpp Rgraphviz smatr]; }; OrderedList = derive2 { name="OrderedList"; version="1.53.0"; sha256="1pdv3pih594x3bkrzmm7ab418mxjsa17qbv0dpmw4w1yyvrlyz5m"; depends=[Biobase twilight]; }; - Organism_dplyr = derive2 { name="Organism.dplyr"; version="1.9.0"; sha256="196ispr6m2r1fc4l4jm985njh8xz7qxcsr8w0kvffv63zx0zy807"; depends=[AnnotationDbi AnnotationFilter BiocFileCache DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges RSQLite S4Vectors]; }; - OrganismDbi = derive2 { name="OrganismDbi"; version="1.23.0"; sha256="0mjav9c9w5mwmkdisci9c7i993xyvqbmsa8nw9kyhqirsxf0p7cc"; depends=[AnnotationDbi Biobase BiocGenerics BiocInstaller DBI GenomicFeatures GenomicRanges graph IRanges RBGL S4Vectors]; }; + Organism_dplyr = derive2 { name="Organism.dplyr"; version="1.9.2"; sha256="1n87ajas2wrrpkpmy0n9zim6f1by9vvqk9wh25kk4rxp3500d8gh"; depends=[AnnotationDbi AnnotationFilter BiocFileCache DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges RSQLite S4Vectors]; }; + OrganismDbi = derive2 { name="OrganismDbi"; version="1.23.2"; sha256="18l7ki8vaavzy0380gw1bhpjf5xs3naaq44xfam307pl5h7xr8c0"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager DBI GenomicFeatures GenomicRanges graph IRanges RBGL S4Vectors]; }; Oscope = derive2 { name="Oscope"; version="1.11.0"; sha256="1x8z5i3v42787iv9hddp65cggnlvr7xa9kippi0sn0wr7gd79zcw"; depends=[BiocParallel cluster EBSeq testthat]; }; OutlierD = derive2 { name="OutlierD"; version="1.45.0"; sha256="085nk41icxzx8halczi4kjd262y8dfxq6lrhwiy8qjb216hbrln6"; depends=[Biobase quantreg]; }; - PAA = derive2 { name="PAA"; version="1.15.0"; sha256="06slcqrpcvz713ga5vl2w0dyswqb78nnqvvf0dxi5cdw8g3h58gs"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; }; + PAA = derive2 { name="PAA"; version="1.15.2"; sha256="16w6xc05gs9ynj01xkrk7gf0qvqknfpicayik5qlm7gmm1k43hm8"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; }; PADOG = derive2 { name="PADOG"; version="1.23.0"; sha256="10libml1j14yy70s22yf8i4mh8awmnx5a94b3krmh6py2xlw41nj"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGG_db KEGGdzPathwaysGEO limma nlme]; }; PANR = derive2 { name="PANR"; version="1.27.0"; sha256="0zr55whhmqyic41chlzxhrn081ray8gl90llb6rwigvmzhfjabyr"; depends=[igraph MASS pvclust RedeR]; }; PAPi = derive2 { name="PAPi"; version="1.21.0"; sha256="1qnbqa72w1734j6rbdbays1f4ysl2b1r65p2hi580zwwi6isaa3i"; depends=[KEGGREST svDialogs]; }; PCAN = derive2 { name="PCAN"; version="1.9.0"; sha256="14ph4mk4svinwpy0rw2b3n96dswahw6273lggw2blp9s24a56a1h"; depends=[BiocParallel]; }; PCpheno = derive2 { name="PCpheno"; version="1.43.0"; sha256="004qx7rclh2q9bbrqf4d54jlzpha8vg0lbaf67gf42ivav0fl908"; depends=[annotate AnnotationDbi Biobase Category GO_db graph GSEABase KEGG_db ppiData ppiStats ScISI SLGI]; }; PECA = derive2 { name="PECA"; version="1.17.0"; sha256="0p4vg0kcrypxm4g8al50rcvrk10lqs23mc00hrd1s8ydycvgd26a"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; }; - PGA = derive2 { name="PGA"; version="1.11.2"; sha256="08ksqsrpx8mj3mbdbvnbx9bnwxqskkyd340a13r76f5d1p44086m"; depends=[AnnotationDbi biomaRt Biostrings data_table GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap RCurl Rsamtools RSQLite rTANDEM rtracklayer S4Vectors stringr VariantAnnotation]; }; + PGA = derive2 { name="PGA"; version="1.11.4"; sha256="1dcig05dglia3ixymm1s7hzxf5fa7p6bgcwlf66qdx72iagr9ivp"; depends=[AnnotationDbi biomaRt Biostrings customProDB data_table GenomicFeatures GenomicRanges ggplot2 IRanges Nozzle_R1 pheatmap RCurl Rsamtools RSQLite rTANDEM rtracklayer S4Vectors stringr VariantAnnotation]; }; PGSEA = derive2 { name="PGSEA"; version="1.55.0"; sha256="07ynkcxppvm8s525y10ly6jcc0ga93a8sqihdxhs1yg092pcbx64"; depends=[annaffy AnnotationDbi Biobase GO_db KEGG_db]; }; PICS = derive2 { name="PICS"; version="2.25.0"; sha256="1qfv4ddkym5s7171i0c4s5v3x8liaxngpv40y362cr895wa63mwm"; depends=[BiocGenerics GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; }; PING = derive2 { name="PING"; version="2.25.0"; sha256="1lgvn09a1frb6cqrnrvmyzlwm7rgis61wd1gqv5y6pf0w6m6ya9k"; depends=[BiocGenerics BSgenome chipseq fda GenomicRanges Gviz IRanges PICS S4Vectors]; }; PLPE = derive2 { name="PLPE"; version="1.41.0"; sha256="11a1wsgzssn5nqbmxxrfqk7js6h3y0zcxgfyqr5hvfz6licl2q3v"; depends=[Biobase LPE MASS]; }; POST = derive2 { name="POST"; version="1.5.0"; sha256="099q5w5sgpamgncga096szl40i3lzjnphki2kfby0svkkvjiyrhl"; depends=[Biobase CompQuadForm GSEABase Matrix survival]; }; PPInfer = derive2 { name="PPInfer"; version="1.7.0"; sha256="0pvhfc3qyxx6vxww6fx7jx8hb72sl4jna1c3bnyw6z7lvp7a8cxw"; depends=[biomaRt fgsea ggplot2 igraph kernlab STRINGdb yeastExpData]; }; - PREDA = derive2 { name="PREDA"; version="1.27.0"; sha256="15ndnwf3f1cj2h0vrh71gs7xdvy97nncbxrlwk6yisvgndjbdmsb"; depends=[annotate Biobase lokern multtest]; }; + PREDA = derive2 { name="PREDA"; version="1.27.1"; sha256="00wwfvcahrhyxylcg5wjsbv3aqsvw230lcggkk3jrwdyb5x902p2"; depends=[annotate Biobase lokern multtest]; }; PROMISE = derive2 { name="PROMISE"; version="1.33.0"; sha256="1gkbpj9cd5fbrrp2zmffnckynbn81kqyg5wvy2g88spa1zxsx6vp"; depends=[Biobase GSEABase]; }; PROPER = derive2 { name="PROPER"; version="1.13.0"; sha256="1w77rishajj0azrcf0cfsg9is98w1f1w3hfh72rgi7kc93d0k4v0"; depends=[edgeR]; }; PROPS = derive2 { name="PROPS"; version="1.3.0"; sha256="15md6zvsa9ismdwbhlzwxkyj38n4bqv4kpbvxbzg7kb50hc109w6"; depends=[Biobase bnlearn reshape2 sva]; }; PROcess = derive2 { name="PROcess"; version="1.57.0"; sha256="1sb25yfpvq4z6famifk951gwx75dd51srf1khm96psz9k0klxbqg"; depends=[Icens]; }; PSEA = derive2 { name="PSEA"; version="1.15.0"; sha256="1rcz03n4asjajlncppvfhmlnar6f9qzb6m9bg99nmp0gdkjcwa2j"; depends=[Biobase MASS]; }; - PSICQUIC = derive2 { name="PSICQUIC"; version="1.19.0"; sha256="06x6r2js8mxl10yrgmmvzb0na5ydya3ldzxaagh8z21smi154215"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; }; + PSICQUIC = derive2 { name="PSICQUIC"; version="1.19.1"; sha256="0554irz5sxq3vglxq1jlr0fip3hfd41zw5wfd05gn5k0h8s3ff7j"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; }; PWMEnrich = derive2 { name="PWMEnrich"; version="4.17.0"; sha256="1mknim17d0wl7vhn6cffjasisd9nmgs4b3fjz42yjj9y5xqjxwv9"; depends=[BiocGenerics Biostrings evd gdata seqLogo]; }; PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.9.0"; sha256="0x1rzblyy45xdr3hnjbacip7v1pbr54wfc2abldgij9mgc0hmhl9"; depends=[FindMyFriends igraph jsonlite pcaMethods shiny]; }; Path2PPI = derive2 { name="Path2PPI"; version="1.11.0"; sha256="1f6qc6cvsrnhh26lkprjan9fxc1kw4hbb1wbr83rswg0lj8nyg6r"; depends=[igraph]; }; - PathNet = derive2 { name="PathNet"; version="1.21.0"; sha256="1gnzghvj0gf4mcbh099v6c13gqjkalgb3g9fpn2i86fq8h61zplh"; depends=[]; }; - PathoStat = derive2 { name="PathoStat"; version="1.7.2"; sha256="0j5by6yqgiyj17wn036dkb9q3d47ynb4m4w9zkf01d38lqzfp2hr"; depends=[ape BiocStyle ComplexHeatmap corpcor DESeq2 devtools dplyr DT edgeR ggplot2 glmnet gmodels knitr limma matrixStats phyloseq plotly plyr RColorBrewer rentrez reshape2 ROCR scales shiny shinyjs tidyr vegan webshot XML]; }; - PathwaySplice = derive2 { name="PathwaySplice"; version="1.5.0"; sha256="15yc7d84cghmqai4m86bzi3cwidngmn6b680a1ngm6lmfj03bykj"; depends=[annotate AnnotationDbi AnnotationHub BiasedUrn Biobase BiocGenerics DOSE dplyr EnrichmentBrowser ensembldb gdata geneLenDataBase GO_db goseq gplots gridExtra htmlwidgets igraph JunctionSeq KEGGREST mgcv org_Hs_eg_db org_Mm_eg_db plotly RColorBrewer reshape2 S4Vectors tibble VennDiagram webshot]; }; - PharmacoGx = derive2 { name="PharmacoGx"; version="1.11.0"; sha256="0s2gwvp9pdc1qf35apcgscz2xrx5sy1x9kcixy9wjwm4qnhr8cag"; depends=[Biobase caTools downloader lsa magicaxis piano RColorBrewer reshape2]; }; + PathNet = derive2 { name="PathNet"; version="1.21.2"; sha256="1ihd81wwx0w1alzylc2wydg9kx9x3m2hw3zyp8qjhxxjf9pps507"; depends=[]; }; + PathoStat = derive2 { name="PathoStat"; version="1.7.8"; sha256="1lnv8x2im6nw4kckv62cmxi06hjxw3ivj9jyzxi9wc0yylyrbp6j"; depends=[ape BiocStyle ComplexHeatmap corpcor DESeq2 devtools dplyr DT edgeR ggplot2 glmnet gmodels knitr limma matrixStats phyloseq plotly plyr RColorBrewer rentrez reshape2 ROCR scales shiny shinyjs tidyr vegan webshot XML]; }; + PathwaySplice = derive2 { name="PathwaySplice"; version="1.5.2"; sha256="1dj56ssc31yxn3g29485phmjjd9a4nndx455yvvig8p74630149w"; depends=[annotate AnnotationDbi AnnotationHub BiasedUrn Biobase BiocGenerics DOSE dplyr EnrichmentBrowser ensembldb gdata geneLenDataBase GO_db goseq gplots gridExtra htmlwidgets igraph JunctionSeq KEGGREST mgcv org_Hs_eg_db org_Mm_eg_db plotly RColorBrewer reshape2 S4Vectors tibble VennDiagram webshot]; }; + Pbase = derive2 { name="Pbase"; version="0.21.3"; sha256="0945vdb18879j269fd16rac4pmlnqbddp6nn1vkfyprfqv3aqdq8"; depends=[AnnotationFilter Biobase BiocGenerics BiocParallel biomaRt Biostrings cleaver ensembldb GenomicRanges Gviz IRanges MSnbase mzID mzR Pviz Rcpp rtracklayer S4Vectors]; }; + PharmacoGx = derive2 { name="PharmacoGx"; version="1.11.3"; sha256="14dib394xhrdapli5lwrzvf4fmbbgpcrgnbrv80749y9ivmg2jb1"; depends=[Biobase caTools downloader lsa magicaxis piano RColorBrewer reshape2]; }; PhenStat = derive2 { name="PhenStat"; version="2.17.0"; sha256="1fvkaqg1ignyknjgrnj359a5276rrscrkdk9029851rjpyzwypd5"; depends=[car corrplot ggplot2 graph knitr lme4 logistf MASS msgps nlme nortest pingr reshape SmoothWin]; }; - Pi = derive2 { name="Pi"; version="1.9.0"; sha256="1bdr53dxz2sfmm7n4214m5mqp47l8ipsm562mhs1pybqfawfwfff"; depends=[caret dnet GenomeInfoDb GenomicRanges ggbio ggplot2 ggrepel glmnet Gviz igraph lattice MASS Matrix plot3D randomForest ROCR scales supraHex XGR]; }; - Pigengene = derive2 { name="Pigengene"; version="1.7.4"; sha256="072bzpimq9135r4s7sfxgw8sb6h0fgygay9fvlbldfcql8amx7kp"; depends=[bnlearn C50 GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; }; + Pi = derive2 { name="Pi"; version="1.9.3"; sha256="0h3a40bhj2410w8ibfbfp2nl76c5anh62pva8phf6y2g4bxvhi9p"; depends=[caret dnet GenomeInfoDb GenomicRanges ggbio ggplot2 ggrepel glmnet Gviz igraph lattice MASS Matrix plot3D randomForest ROCR scales supraHex XGR]; }; + Pigengene = derive2 { name="Pigengene"; version="1.7.8"; sha256="0spdvc7wl8y7nsvyfrzni666wpbi8021ff2nlc4f6chhx6zqvg2i"; depends=[bnlearn C50 GO_db graph impute MASS matrixStats partykit pheatmap preprocessCore Rgraphviz WGCNA]; }; Polyfit = derive2 { name="Polyfit"; version="1.15.0"; sha256="0k3apzd7szmglba2s51grmp4lbvv2wmv6kvv43mvbvrvc59cyxq5"; depends=[DESeq]; }; PowerExplorer = derive2 { name="PowerExplorer"; version="1.1.1"; sha256="06igcls1khn3dvajp7289v4ax6yr5cgg0da0d81dkr38cb6lwnpx"; depends=[Biobase BiocParallel data_table DESeq2 ggplot2 gridExtra MASS ROTS S4Vectors SummarizedExperiment vsn]; }; Prize = derive2 { name="Prize"; version="1.11.0"; sha256="0fk26mk97l3jdj9n20ha7m8gcfxc20w4c9c5xshnphfij56brrr5"; depends=[diagram ggplot2 gplots matrixcalc reshape2 stringr]; }; ProCoNA = derive2 { name="ProCoNA"; version="1.19.0"; sha256="1648ly7mpqfhj1phnvwrkzsj31wdk5ddg7cc073kbwwgmz859r0d"; depends=[BiocGenerics flashClust GOstats MSnbase WGCNA]; }; - Prostar = derive2 { name="Prostar"; version="1.13.0"; sha256="01k76vh9z15ya8cjymwmpcl0z79q3fqpz2m5yvvsy21ijw2vd004"; depends=[DAPAR DAPARdata data_table DT highcharter htmlwidgets R_utils rhandsontable shiny shinyAce shinyBS shinyjs webshot]; }; + Prostar = derive2 { name="Prostar"; version="1.13.16"; sha256="0kfqzibwkwbggjs5isgf9s1nk3zssahcicf9vpr3s2rkkmn18y8j"; depends=[BiocManager colourpicker DAPAR DAPARdata data_table DT future highcharter htmlwidgets later promises R_utils rclipboard rhandsontable shiny shinyAce shinyBS shinycssloaders shinyjqui shinyjs shinythemes shinyTree shinyWidgets webshot XML]; }; ProtGenerics = derive2 { name="ProtGenerics"; version="1.13.0"; sha256="0mcdiy93c01ki2zfv90a5q00hss8i4mds4gw6n6gp32f40ap7h2j"; depends=[]; }; - ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.11.0"; sha256="01279ybid6k8l8w564rpx7jd1487dafxkmgfzvg0964z930i7qsm"; depends=[AnnotationHub AnnotationHubData Biobase BiocInstaller Biostrings GenomeInfoDb MSnbase mzR RCurl]; }; - PureCN = derive2 { name="PureCN"; version="1.11.11"; sha256="1n2ikzcyxw8rfbid2bgg6fnn3nlfwgmjw73f9y06hyci0m2qpc8n"; depends=[BiocGenerics Biostrings data_table DNAcopy futile_logger GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra IRanges Matrix RColorBrewer rhdf5 Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM]; }; + ProteoMM = derive2 { name="ProteoMM"; version="0.99.8"; sha256="0j9sjj7r6jbgwv2vfsgd61xk5sd6rlw6ns5j0qvpcry6a5a26z3s"; depends=[biomaRt gdata ggplot2 ggrepel gtools matrixStats]; }; + ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.11.1"; sha256="1zlwsfk1f0pc6diqmd5r6cfxz48zz1m1hxagly7rw3v52qmjqynh"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDb MSnbase mzR RCurl]; }; + PureCN = derive2 { name="PureCN"; version="1.11.20"; sha256="0nznlpqpj1lrxn0lymq5xksn8zs6hda4jmq57mks9nj8ilq1sw0r"; depends=[BiocGenerics Biostrings data_table DNAcopy futile_logger GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra IRanges Matrix RColorBrewer rhdf5 Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM]; }; Pviz = derive2 { name="Pviz"; version="1.15.0"; sha256="08kkrhxmy60lkvmjwpkv3nv7w8mybv5465923a9hghzs291qjvn4"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; }; QDNAseq = derive2 { name="QDNAseq"; version="1.17.0"; sha256="113s3ir4dxhxxpfy700hp2lgvx6qgzy1nbqin0g3fz7z0y50m2ns"; depends=[Biobase BiocParallel CGHbase CGHcall DNAcopy GenomicRanges IRanges matrixStats R_utils Rsamtools]; }; + QSutils = derive2 { name="QSutils"; version="0.99.8"; sha256="03840r3xw83gd1k56p66qang26g26gilrddfdnjjilpkcshmbksd"; depends=[ape BiocGenerics Biostrings psych]; }; QUALIFIER = derive2 { name="QUALIFIER"; version="1.25.1"; sha256="1acaga0zc3vnjmr15xmyd05xp2cdwh96armg47qbpb4kygfh433g"; depends=[Biobase data_table flowCore flowViz flowWorkspace hwriter lattice latticeExtra MASS ncdfFlow reshape XML]; }; - QUBIC = derive2 { name="QUBIC"; version="1.9.0"; sha256="1kayxj3msc171x6glgvqpqygrigf8x0knknk7ci7fmbg6haf44jf"; depends=[biclust Matrix Rcpp RcppArmadillo]; }; - QuartPAC = derive2 { name="QuartPAC"; version="1.13.0"; sha256="0mxq3nn5lqfqk8lpg1pys724pvviqz1fkhbnp5zlszvyhikmic9q"; depends=[data_table GraphPAC iPAC SpacePAC]; }; - QuasR = derive2 { name="QuasR"; version="1.21.0"; sha256="1q3h4dg95wqmfkbrp5rvyp7qazafcgwc4chhw7rlwdbvic080g63"; depends=[Biobase BiocGenerics BiocInstaller BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rsamtools rtracklayer S4Vectors ShortRead zlibbioc]; }; - QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.15.0"; sha256="0b0qxsqf3g42k68d22w22n8y5yjvhx4jfkwpaxg38z5i8404n03k"; depends=[dplyr Rcpp yaml]; }; - R3CPET = derive2 { name="R3CPET"; version="1.13.0"; sha256="0viqypiwmrhi08islj8lg2byhvhfblwjj340ms2a7wf8zbyl439l"; depends=[BiocGenerics clues clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; }; + QUBIC = derive2 { name="QUBIC"; version="1.9.1"; sha256="0akvph9v1rqiq5a4ygi3wcpi82n4py59fdwvzbphnkd1wpva61wn"; depends=[biclust Matrix Rcpp RcppArmadillo]; }; + QuartPAC = derive2 { name="QuartPAC"; version="1.13.1"; sha256="105jl05hai0jiy240618zbb861d7ya0x51hds6h9af189jgc98jz"; depends=[data_table GraphPAC iPAC SpacePAC]; }; + QuasR = derive2 { name="QuasR"; version="1.21.2"; sha256="1wz8mq86ffws24akwf0idvq3s2ys8dgwcm47ajv59589x75a9qwv"; depends=[Biobase BiocGenerics BiocManager BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rsamtools rtracklayer S4Vectors ShortRead zlibbioc]; }; + QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.15.3"; sha256="0k3a64j3zkvqqg04hlx94iiw5g2hndnl99m2bbn6asjx3vyjj237"; depends=[dplyr Rcpp yaml]; }; + R3CPET = derive2 { name="R3CPET"; version="1.13.1"; sha256="182h5zgq496lg284ncjk5qrqfnzab2cs8lkjrrxf4yzvf8h38bgl"; depends=[BiocGenerics clues clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; }; R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.31.0"; sha256="16cri94hg585804xaq5gfbs9nn62nhmcayapvwpb2y7vs855g4qx"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; }; R4RNA = derive2 { name="R4RNA"; version="1.9.0"; sha256="08jrmdcdwk9dzk38sjc6rxn4nf3s5lg6x9w540drhiynd3jw9nxw"; depends=[Biostrings]; }; RBGL = derive2 { name="RBGL"; version="1.57.0"; sha256="0bm2wfsi3himissj2x1v16rgrz3j2wz9s1kisaxxpgv27a4bvp0i"; depends=[graph]; }; - RBM = derive2 { name="RBM"; version="1.13.0"; sha256="0ssl53wbzakkggx2jlzy378jnw13w116dxs3wnzmdaywa5nqbamr"; depends=[limma marray]; }; + RBM = derive2 { name="RBM"; version="1.13.1"; sha256="1yc0cqw84b5bzwnp85x50q3ibq7zr3awnc0ndrf05q38jbqrgskc"; depends=[limma marray]; }; RBioinf = derive2 { name="RBioinf"; version="1.41.0"; sha256="1bi7dx51nhq7y2s0395hncbfbwfhdixwwn5n238f6fq6sxg95v1h"; depends=[graph]; }; - RCAS = derive2 { name="RCAS"; version="1.7.0"; sha256="14s4f6lfy31vv791h8yasc4b3883r0ksjab9wrsw8w8381ac2323"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DBI DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo knitr motifRG org_Hs_eg_db pbapply pheatmap plotly plotrix proxy rmarkdown RSQLite rtracklayer S4Vectors topGO]; }; + RCAS = derive2 { name="RCAS"; version="1.7.3"; sha256="1k8frzidrg88j0mzbhn4njm2jfgxi5lv91yszarl43fhl19zrdl2"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DBI DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo knitr motifRG org_Hs_eg_db pbapply pheatmap plotly plotrix proxy rmarkdown RSQLite rtracklayer S4Vectors topGO]; }; RCASPAR = derive2 { name="RCASPAR"; version="1.27.0"; sha256="00r0p6hzzjsgpwc0ja6ws2sn7fp5qzlcajvwq3l5zd99zcn3lds8"; depends=[]; }; - RCy3 = derive2 { name="RCy3"; version="2.1.13"; sha256="1kp2hgh2kid9xy8w97wkwc3759sxz7lp6inamsflff5a12ffd41c"; depends=[BiocGenerics graph httr igraph RJSONIO XML]; }; - RCyjs = derive2 { name="RCyjs"; version="2.3.6"; sha256="1gbqpf9ljvlhl8zmd39d7fifn67sv6gmfvryfk9yf0y53x9l95sc"; depends=[base64enc BiocGenerics BrowserViz graph httpuv]; }; + RCy3 = derive2 { name="RCy3"; version="2.1.26"; sha256="0j8ynimcgr0jbnlfib17vr4zjf3k5j5159aq1v8y3dxcx21hqh0d"; depends=[BiocGenerics graph httr igraph RJSONIO XML]; }; + RCyjs = derive2 { name="RCyjs"; version="2.3.11"; sha256="1q74r04h169mix224jcahh8mir17dc1ifasfcgjir9szw3gh97lv"; depends=[base64enc BiocGenerics BrowserViz graph httpuv]; }; RDAVIDWebService = derive2 { name="RDAVIDWebService"; version="1.19.0"; sha256="0in7bnx1v9z9z55b88hmix8fgrjysbzjxp0c53psq3k7fm46yxg7"; depends=[Category ggplot2 GO_db GOstats graph RBGL rJava]; }; RDRToolbox = derive2 { name="RDRToolbox"; version="1.31.0"; sha256="0zm1319g4b0jfqi7ix7insqadilccmlcc1bnwf4hwgw1d2bsby1p"; depends=[MASS rgl]; }; + REBET = derive2 { name="REBET"; version="0.99.6"; sha256="1q8ksqv13rnk2rv0xs1cfkskp8j701pi231b5m14s41gxq85f689"; depends=[ASSET]; }; REDseq = derive2 { name="REDseq"; version="1.27.0"; sha256="0s1v5qlbzz54pck44vy0bzhkm0ga7wa01nrr4x1fbswxbkz80djy"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; }; - REMP = derive2 { name="REMP"; version="1.5.0"; sha256="0gr7x6l9z871p41w32q8dqz2jaglvz51d7zrrwxy55iidbnqw5jv"; depends=[AnnotationHub BiocGenerics BiocParallel Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 caret doParallel foreach GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b2_hg19 impute IRanges iterators kernlab minfi org_Hs_eg_db ranger S4Vectors settings SummarizedExperiment]; }; + REMP = derive2 { name="REMP"; version="1.5.2"; sha256="04jg8c2x1k3wbf1gr8ncdgy4z09r2zk1fhbxpgz8cv2hngdpwhfi"; depends=[AnnotationHub BiocGenerics BiocParallel Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 caret doParallel foreach GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b2_hg19 impute IRanges iterators kernlab minfi org_Hs_eg_db ranger S4Vectors settings SummarizedExperiment]; }; RGMQL = derive2 { name="RGMQL"; version="1.1.0"; sha256="1z7dj3lmw40b08x33bl9fb4asr22syn0cinl12ya60nawh5rlxsi"; depends=[BiocGenerics data_table dplyr GenomicRanges glue httr plyr RGMQLlib rJava rtracklayer S4Vectors xml2]; }; RGSEA = derive2 { name="RGSEA"; version="1.15.0"; sha256="1c0i33lz0cl983dk520g2caf0844jknd39h71fy6kynknqxmnqqs"; depends=[BiocGenerics]; }; RGalaxy = derive2 { name="RGalaxy"; version="1.25.0"; sha256="04xs1w3yndlrdbac2ybzhdk8fdbg95a3qmjjqyykhfl5mck97d97"; depends=[Biobase BiocGenerics optparse roxygen2 XML]; }; RGraph2js = derive2 { name="RGraph2js"; version="1.9.0"; sha256="0y7fnysz9rljyrk4gs1r29zgxzzcpwk3jayv6km20l6abxzbfccr"; depends=[digest graph rjson whisker]; }; - RIPSeeker = derive2 { name="RIPSeeker"; version="1.21.0"; sha256="02m401h56lb88qcfbidfxvh5nxls465y68jgjcfv7sd4x83ykd7z"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; - RITAN = derive2 { name="RITAN"; version="1.5.2"; sha256="0nfnrh4w3y33rygdl07ydvxzl05nnysl3zlsg9nf459w98y4s7xg"; depends=[BgeeDB dynamicTreeCut ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png ProNet RColorBrewer reshape2 RITANdata sqldf STRINGdb]; }; - RIVER = derive2 { name="RIVER"; version="1.5.0"; sha256="1fdav14pba08a1hyqh82yad1ynvbzbc9i5gn5gxiypa833s5v31h"; depends=[Biobase ggplot2 glmnet pROC]; }; + RIPSeeker = derive2 { name="RIPSeeker"; version="1.21.1"; sha256="0vxllhd0pyq1a3z0gqpiv5llyb18qi8ph6h8jmqbjsknba243j30"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + RITAN = derive2 { name="RITAN"; version="1.5.5"; sha256="0p2dpn6zas3wndzr9dbs1l97s5w7qzj0y7db7796jysd3mlzlvz1"; depends=[BgeeDB dynamicTreeCut ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png RColorBrewer reshape2 RITANdata sqldf STRINGdb]; }; + RIVER = derive2 { name="RIVER"; version="1.5.1"; sha256="1c7li0kihq3rxqv7ykz12accyqpiwwvjdlma137mfh5dhpjlx5cr"; depends=[Biobase ggplot2 glmnet pROC]; }; RImmPort = derive2 { name="RImmPort"; version="1.9.0"; sha256="0amhihh6g8j817xr05bqcp9sx564gp0jlg34iinmjqzizksflv1g"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; }; RJMCMCNucleosomes = derive2 { name="RJMCMCNucleosomes"; version="1.5.0"; sha256="008nmql2f1qw246bj50w38kabcfw2bvgqb086ch9h9cv4b976dwi"; depends=[BiocGenerics BiocParallel consensusSeekeR GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; }; RLMM = derive2 { name="RLMM"; version="1.43.0"; sha256="1hfr0w56jai1v3x0b6w4z5y00yf8j2aa2yhcd994lj48klwgjacp"; depends=[MASS]; }; + RMassBank = derive2 { name="RMassBank"; version="2.9.2"; sha256="0yvbd1425ygp3xmn1danhbx5865cyl2h340yscs4r6g9whciw1vn"; depends=[Biobase digest httr MSnbase mzR rcdk Rcpp RCurl rjson S4Vectors XML yaml]; }; RNASeqPower = derive2 { name="RNASeqPower"; version="1.21.0"; sha256="0gd3mbish7k4zwfv4kadcnifwm485p7zizvdj8pk1ns1fl5cwpbz"; depends=[]; }; - RNAdecay = derive2 { name="RNAdecay"; version="1.1.1"; sha256="1xnj3q52biy8rzpyvd7b77sszsvs01sxkkkkkz0waqi61q58rhvv"; depends=[ggplot2 gplots nloptr TMB]; }; - RNAinteract = derive2 { name="RNAinteract"; version="1.29.0"; sha256="03xizq9h93ii1jwjbk6kcmh71fc882qk9fnv3hbl15a9d8yvzpnv"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; + RNASeqR = derive2 { name="RNASeqR"; version="0.99.25"; sha256="03mka6s8s064agyrvl3xzdds1dr03jimgcqgnisr61ypdy9lyih0"; depends=[ballgown Biostrings clusterProfiler corrplot DESeq2 DOSE edgeR factoextra FactoMineR ggplot2 gridExtra org_Hs_eg_db org_Sc_sgd_db pathview PerformanceAnalytics pheatmap rafalib reshape2 reticulate Rsamtools stringr systemPipeR systemPipeRdata]; }; + RNAdecay = derive2 { name="RNAdecay"; version="1.1.2"; sha256="09z07f5x0h19dbk47lwmp9h9ijvmdznr8hxxyihazqvr66qb5ghn"; depends=[ggplot2 gplots nloptr TMB]; }; + RNAinteract = derive2 { name="RNAinteract"; version="1.29.1"; sha256="1wq1b3z8yqslw4l4103x28lv063m5f1wi1dr43q9h345gcb4kyvs"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; }; RNAither = derive2 { name="RNAither"; version="2.29.0"; sha256="0w90awkmdi2h6q2hpvl6i5qbkdggbpvac1cbxx2995hmx8lc6pwa"; depends=[biomaRt car geneplotter limma prada RankProd splots topGO]; }; RNAprobR = derive2 { name="RNAprobR"; version="1.13.0"; sha256="0hjhk0ap6n17ccjkjfxq8c8cfg166gcwbapmwixac4dqwqg5k997"; depends=[BiocGenerics Biostrings GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr Rsamtools rtracklayer S4Vectors]; }; ROC = derive2 { name="ROC"; version="1.57.0"; sha256="1glip25d37gz13b2c4zpk1vm34kvfxvgbsz302ww0g8wqq3cc0i5"; depends=[]; }; ROTS = derive2 { name="ROTS"; version="1.9.1"; sha256="061z3cnwaz5fgbpikg6vqazp1bqsxp7ln8krn3i1fz20k4ny800z"; depends=[Biobase Rcpp]; }; ROntoTools = derive2 { name="ROntoTools"; version="2.9.0"; sha256="1ivsr52qf9sz08zpp1vbvwyqpsfd55m4jj8g62mb5khkmrf8mnwl"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; }; - RPA = derive2 { name="RPA"; version="1.37.0"; sha256="0cm2sfv6pkrxjq8xnby2hsnda687bdlc63b3i96fmhzjldfwnixf"; depends=[affy BiocGenerics phyloseq]; }; - RProtoBufLib = derive2 { name="RProtoBufLib"; version="1.3.0"; sha256="1ji9m1x9l84iwdw1bd2bhbvdfwn3jnw80inc6xnc6vp4k64zll4m"; depends=[]; }; + RPA = derive2 { name="RPA"; version="1.37.2"; sha256="16yr6qp6wcdrb4zpyrs30zv0q4zb74s04fzpddk6c7v1phmakk0a"; depends=[affy BiocGenerics phyloseq]; }; + RProtoBufLib = derive2 { name="RProtoBufLib"; version="1.3.7"; sha256="0f68ziylg1pp3wakxr08i6hlhf3grnvfmsr7fc1v1phsz8amg676"; depends=[]; }; RRHO = derive2 { name="RRHO"; version="1.21.0"; sha256="00wy53vmfdzfv56ib277cl7rnv2l6klyixyjq93whmzr39d8mbwi"; depends=[VennDiagram]; }; RSVSim = derive2 { name="RSVSim"; version="1.21.0"; sha256="0l7wq0cvws0n78xp14rwagrjhm3pxzf2jg3k1w5pv6w778mhm9dw"; depends=[Biostrings GenomicRanges IRanges ShortRead]; }; RSeqAn = derive2 { name="RSeqAn"; version="1.1.0"; sha256="186qcffr5f1g5x5didd8gkhfdl9wxdivqjwxbcn001i3k71h11mm"; depends=[]; }; RTCA = derive2 { name="RTCA"; version="1.33.0"; sha256="0wyvn004xjxgr80ar5a0bcc6jpz9ksi03is8yc8ijsdlssk9cs71"; depends=[Biobase gtools RColorBrewer]; }; - RTCGA = derive2 { name="RTCGA"; version="1.11.0"; sha256="1r5qxbbw420cq2a648ispxwlswv5xpi9r4r89r7d7cgaw1k1n0h5"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; }; - RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.11.1"; sha256="0ajrz01aqqs30m5dq6x0l2gn49vhbi4k9ppyzgdy0ljpvx95c8hb"; depends=[Biobase BiocGenerics data_table GenomeInfoDb GenomicRanges httr IRanges limma plyr RaggedExperiment RCircos RCurl RJSONIO S4Vectors stringr SummarizedExperiment survival TCGAutils XML]; }; - RTN = derive2 { name="RTN"; version="2.5.1"; sha256="1gwvqqjky6cgq4sdj8myjqrywdx7a44wnvb20l47qlqamlr41905"; depends=[car data_table igraph IRanges limma minet RedeR S4Vectors snow]; }; - RTNduals = derive2 { name="RTNduals"; version="1.5.1"; sha256="17vp27lxjh3v0y2s1d96xk2y3wxwj2lh40c5z7lqh6qx89lyhirz"; depends=[RTN]; }; - RTNsurvival = derive2 { name="RTNsurvival"; version="1.5.0"; sha256="0fyks8lvxqdli3wm0z0py6vn5y3mfpvi95mqb7hycafc2812am68"; depends=[png RColorBrewer RTN RTNduals survival]; }; + RTCGA = derive2 { name="RTCGA"; version="1.11.3"; sha256="1r0c2lj73brq174lfnxlwvjz34wckf2kd5hkzmymwv6vgy83j98q"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; }; + RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.11.8"; sha256="0sb5n88vbx24dfn66i4xd71c8kswsgwd14zky172lrjhplb1lkwm"; depends=[BiocGenerics data_table DelayedArray GenomeInfoDb GenomicRanges IRanges limma RaggedExperiment RCircos RCurl RJSONIO S4Vectors stringr SummarizedExperiment survival TCGAutils XML]; }; + RTN = derive2 { name="RTN"; version="2.5.6"; sha256="01r5hv1xc3znllqknc06x8zs9nxs2d9y2fxi8mv8ggxplaw05mwz"; depends=[data_table igraph IRanges limma minet mixtools RedeR S4Vectors snow viper]; }; + RTNduals = derive2 { name="RTNduals"; version="1.5.4"; sha256="1kjx590l4q2g9khph4xfkj2nqnq9aycyy16havv2ll4i48k4j4i7"; depends=[RTN]; }; + RTNsurvival = derive2 { name="RTNsurvival"; version="1.5.4"; sha256="0gn6s0lpxag113v1smh20k1w0yyhpr2wp4i0hvihxlqascmrp73j"; depends=[RColorBrewer RTN RTNduals scales survival viper]; }; RTopper = derive2 { name="RTopper"; version="1.27.0"; sha256="1d2bnvjlwgrahxjd1x6gzdhz70wyd990iq9204kc072qyi40l2yz"; depends=[Biobase limma multtest]; }; - RUVSeq = derive2 { name="RUVSeq"; version="1.15.0"; sha256="1dnjshlpalfnrgk9dmig5k1bnshpk4ifp3bvh1cp1z55yihmw111"; depends=[Biobase EDASeq edgeR MASS]; }; + RUVSeq = derive2 { name="RUVSeq"; version="1.15.1"; sha256="0j60afjrnbi8x00nw5y0l8m2j7i4n1aq31k8swxinsniawhidbvn"; depends=[Biobase EDASeq edgeR MASS]; }; RUVcorr = derive2 { name="RUVcorr"; version="1.13.0"; sha256="0cfq69vvajn2s8gyrr4g9vzf8l8wp7p6hg6jlfffv2kfn3yhd05g"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; }; RUVnormalize = derive2 { name="RUVnormalize"; version="1.15.0"; sha256="02v5kj8hbzgcckqq671zypfkf460j3rxiqxh4w5izp9bxqdv9g3g"; depends=[Biobase RUVnormalizeData]; }; - RVS = derive2 { name="RVS"; version="1.3.0"; sha256="0y98yaj5lvlc4104nqjhk7g00f1zqaqsig3mdf7hvwqhlwdsyh0l"; depends=[gRain kinship2 snpStats]; }; - RaggedExperiment = derive2 { name="RaggedExperiment"; version="1.5.2"; sha256="157sfaz4s6wpvccn4s7w0j0iv69zqzf8vxpamp4kdzdhg9ky7byw"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; - RandomWalkRestartMH = derive2 { name="RandomWalkRestartMH"; version="1.1.0"; sha256="1kzxl773z4619lvznxv67yb7k2lfjn3bfgfssgql0adrjfm8qi1a"; depends=[dnet igraph Matrix]; }; + RVS = derive2 { name="RVS"; version="1.3.1"; sha256="02y68m30aqmcyf1bv0aicrijdx87gzaa9a5f2dlfjfd6jgk2ijn9"; depends=[gRain kinship2 snpStats]; }; + RaggedExperiment = derive2 { name="RaggedExperiment"; version="1.5.7"; sha256="1wvczzqhsgdj0f6a2v7ls4c51vm9wik10wnlkxsw06h3xz6c3xmf"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; + RandomWalkRestartMH = derive2 { name="RandomWalkRestartMH"; version="1.1.1"; sha256="0p9qvbsmxvca615h6pk51n8dm21265bmciix3ddnhljq1c6lgc7x"; depends=[dnet igraph Matrix]; }; RankProd = derive2 { name="RankProd"; version="3.7.0"; sha256="1zqawks6i567dk4ylnyh0jddnp62nqygshv4ihy39xhjab4j04wx"; depends=[gmp Rmpfr]; }; RareVariantVis = derive2 { name="RareVariantVis"; version="2.9.0"; sha256="1466zh50n0f1apkbd38lp84r8byras0pna5bm49bc7i7s9agkp14"; depends=[BiocGenerics BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores googleVis gtools IRanges phastCons100way_UCSC_hg19 S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; }; Rariant = derive2 { name="Rariant"; version="1.17.0"; sha256="0nm0k2d1bhqsk9gir38gd0py6xn5wk0b985kpix8ghi64mypmqmr"; depends=[BiocGenerics dplyr exomeCopy GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges reshape2 Rsamtools S4Vectors shiny SomaticSignatures VariantAnnotation VGAM]; }; RbcBook1 = derive2 { name="RbcBook1"; version="1.49.0"; sha256="1ar8jl97fillw0g7kf09mxkr9215dw3jmw2b6qaq9pch7qg8qnr7"; depends=[Biobase graph rpart]; }; - Rbowtie = derive2 { name="Rbowtie"; version="1.21.0"; sha256="05ql92h3s7ppsf5fdrsqbhsn9snwhf168yr78n7qhafw9p6ry77j"; depends=[]; }; - Rbowtie2 = derive2 { name="Rbowtie2"; version="1.3.0"; sha256="02cf3hn9nb10583fwxqzb8iygsm5xzmxhk4y0iadyvxi6nsz6lbk"; depends=[]; }; + Rbowtie = derive2 { name="Rbowtie"; version="1.21.2"; sha256="1l5mllfa4kfdrf65xmssd3wpfvqnl9p0lajg2fz1hl98xwm7yl31"; depends=[]; }; + Rbowtie2 = derive2 { name="Rbowtie2"; version="1.3.1"; sha256="1ss2i77lq3fazv6ipv543cfizchp9gh566d7xbjkggh1a0vcm1db"; depends=[]; }; Rcade = derive2 { name="Rcade"; version="1.23.0"; sha256="0d6cyn6b06g0qkps2d7b65p7pa7bz6iv71lv4hbzmdc581azg4fq"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; }; Rchemcpp = derive2 { name="Rchemcpp"; version="2.19.0"; sha256="17kz0ld7hnrvdv69hz3kj3mhv2f4qms9i65lrwam63g0aydfzyrx"; depends=[ChemmineR Rcpp]; }; RchyOptimyx = derive2 { name="RchyOptimyx"; version="2.21.0"; sha256="0fzmw1kxnaqmk5h61r2dkwq0xp8ir7gg7kq2wkhyvpd68hr3ir3d"; depends=[flowType graph Rgraphviz sfsmisc]; }; - RcisTarget = derive2 { name="RcisTarget"; version="1.1.2"; sha256="1a909bnc96bhn1jd8yk1d68f9x49lbd6wgbmwqxq1k1iqh8qj2hs"; depends=[AUCell BiocGenerics data_table feather GSEABase R_utils SummarizedExperiment]; }; - Rcpi = derive2 { name="Rcpi"; version="1.17.0"; sha256="0a6cs6bvnzx9cp5y4m3h9in0bhq78iy50p48p59k6qqzkvldgcqy"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; }; + RcisTarget = derive2 { name="RcisTarget"; version="1.1.3"; sha256="09zkvl5hwcds9w5n5h51zgpilmygljmar3fqd5wihr8dd6bj1qnk"; depends=[AUCell BiocGenerics data_table feather GSEABase R_utils SummarizedExperiment]; }; + Rcpi = derive2 { name="Rcpi"; version="1.17.2"; sha256="1d77jnlw2jsg8f2ij7ax8ngwb99bngiq0vvdpx2q5nmhkzn9w5vq"; depends=[Biostrings ChemmineR doParallel fmcsR foreach GOSemSim rcdk RCurl rjson]; }; Rdisop = derive2 { name="Rdisop"; version="1.41.0"; sha256="038bgrf5bcdwy8bji5wprq55ypajwp68lqv1i24bk6hikfm2g7p9"; depends=[Rcpp RcppClassic]; }; ReQON = derive2 { name="ReQON"; version="1.27.0"; sha256="1dvsnbsl5ljwfirn61rbcxvrdy74qv96xbs4d8x1wmkfs2bsm2gy"; depends=[rJava Rsamtools seqbias]; }; - ReactomePA = derive2 { name="ReactomePA"; version="1.25.0"; sha256="0hrprjkzg6mdsyqyxgzpscfvgm0335j2avv96a9n70w7rj1zx3ym"; depends=[AnnotationDbi DOSE enrichplot ggplot2 ggraph graphite igraph reactome_db]; }; - ReadqPCR = derive2 { name="ReadqPCR"; version="1.27.0"; sha256="0qbfx6kj6bk60wilbnp49inairhhsi1638i5hhfd1w8365mmzalq"; depends=[affy Biobase]; }; + ReactomePA = derive2 { name="ReactomePA"; version="1.25.1"; sha256="1kqhm5n1g8r1rci0n1135pcka2x0p8h565m609bfljiqnmgaza9v"; depends=[AnnotationDbi DOSE enrichplot ggplot2 ggraph graphite igraph reactome_db]; }; + ReadqPCR = derive2 { name="ReadqPCR"; version="1.27.2"; sha256="1mbaqp0xj0ncdja7rgb84j54bv1vricsabnfj6d8v55yrp1jp7p6"; depends=[Biobase]; }; RedeR = derive2 { name="RedeR"; version="1.29.0"; sha256="00j3yr07qg363ghbgv76ydyar0jp48zdfw5pdpxnv13mzm48wa4r"; depends=[igraph]; }; RefNet = derive2 { name="RefNet"; version="1.17.0"; sha256="0lcbg131gxkvsvmbwj4gpqdpfqjik91jmyd2g745yb7rayly252g"; depends=[AnnotationHub BiocGenerics IRanges PSICQUIC RCurl shiny]; }; RefPlus = derive2 { name="RefPlus"; version="1.51.0"; sha256="0wq0l2883ns2sl8ia5qdx6wn9227lxaz7m0g3lqmr36xkflc1ka1"; depends=[affy affyPLM Biobase preprocessCore]; }; Repitools = derive2 { name="Repitools"; version="1.27.0"; sha256="1anh3fn4wyn69838y7jr5h6bhi8m7d7r1n68rbqvsvbr4bik54vr"; depends=[aroma_affymetrix BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; }; ReportingTools = derive2 { name="ReportingTools"; version="2.21.1"; sha256="0rdndxizkbx8bdjcx82x59y326ypsxrlmzyrgkgkmm3hgq041n97"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; }; Rgin = derive2 { name="Rgin"; version="1.1.0"; sha256="1yqif2dpw0c3p4kg8pni80ggh3f6430nd7k3k0fxirz74ljv642h"; depends=[RcppEigen]; }; - Rgraphviz = derive2 { name="Rgraphviz"; version="2.25.0"; sha256="06kvi85d2wgm2v9pvxn9swrvi4cavww5idcc7gx4d80w4kwzhx5f"; depends=[graph]; }; - Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.3.1"; sha256="1g25896i244fv2bpzd68sd542s2842fs39bssxdjd8fcshxkzy2v"; depends=[]; }; + Rgraphviz = derive2 { name="Rgraphviz"; version="2.25.1"; sha256="1l98pa3zp18xp64phrp5k7sn9an3a8mqp124ik8a2gk8hs021glx"; depends=[graph]; }; + Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.3.3"; sha256="19r2afmvik4as8cwgk0adh3rm94bjp9vll3c63845swrsk13smzz"; depends=[]; }; Rhtslib = derive2 { name="Rhtslib"; version="1.13.4"; sha256="0g60pz7ssy872ppws7qvsv7miph3yhx48p6sqmxi3qbz0qs6dq15"; depends=[zlibbioc]; }; RiboProfiling = derive2 { name="RiboProfiling"; version="1.11.0"; sha256="0l76dfz2r2grx31v8ic80k3mry78m20znssrh5i7v6xfh33ghg6c"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; }; Ringo = derive2 { name="Ringo"; version="1.45.0"; sha256="0pwyfjv8f91g7i1h9qpzwgbkgyh04dyvmrm9v4rdabmfbhr38c6g"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; }; - Risa = derive2 { name="Risa"; version="1.23.0"; sha256="1kch6h68a6sxdrndqzxmqhyj5mv08iipdmv09z3hax7aw45lk08h"; depends=[affy Biobase biocViews Rcpp xcms]; }; + Risa = derive2 { name="Risa"; version="1.23.2"; sha256="0ng31ms4ndfgwna99qqf73ad9klgi7d477x3my4wkd6896hk7xg3"; depends=[affy Biobase biocViews Rcpp xcms]; }; Rmagpie = derive2 { name="Rmagpie"; version="1.37.0"; sha256="1qzxifxdkc86p4q8l7qz8bmxlh5an7zkmgbzb72chwm6bby774m8"; depends=[Biobase e1071 kernlab pamr]; }; RmiR = derive2 { name="RmiR"; version="1.37.0"; sha256="0zz0jgqfqph0rhkbx0bgm8kcwm81hsk1cml8a917gfymfpzj93s8"; depends=[DBI RmiR_Hs_miRNA RSVGTipsDevice]; }; Rmmquant = derive2 { name="Rmmquant"; version="0.99.11"; sha256="0lj7dnjf5msrn7fbr68krv2rgav8qrpahgj37qa64k5cn0xyiblw"; depends=[BiocStyle DESeq2 devtools GenomicRanges org_Mm_eg_db Rcpp S4Vectors SummarizedExperiment TBX20BamSubset TxDb_Mmusculus_UCSC_mm9_knownGene]; }; - RnBeads = derive2 { name="RnBeads"; version="1.13.1"; sha256="146aziw6d7jalkjj81kgdkbnmzpvia8khgqkbpfngjykyykdgqy9"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr S4Vectors]; }; + RnBeads = derive2 { name="RnBeads"; version="1.99.0"; sha256="1gmhq1rp5jlkm0dmbzzxzpylyxzpbf2529j3v7a37fq4pia0nylk"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr S4Vectors]; }; RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="1.13.0"; sha256="0d27jiw016fkmzpd4lsjnrkd122amqi37cr5rpnwviyw47rw5dxj"; depends=[biomaRt edgeR heatmap3 KEGGREST matlab Rcpp RnaSeqSampleSizeData]; }; Rnits = derive2 { name="Rnits"; version="1.15.0"; sha256="0vg3rx87fw9y792b9icf1qliwsbi7h74csk7n9ya8jwjsyb0fcv2"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; }; Roleswitch = derive2 { name="Roleswitch"; version="1.19.0"; sha256="12pqrclq4vfsv0y9ykisri5l2zy3pz3sz22xqlqfkmlldqvngy4v"; depends=[Biobase biomaRt Biostrings DBI microRNA plotrix pracma reshape]; }; RpsiXML = derive2 { name="RpsiXML"; version="2.23.0"; sha256="061r9c1lb3qrm4lwpk87ynsi6nqjwqv2cxk9z6l01b14cb2mn6r3"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; }; - Rqc = derive2 { name="Rqc"; version="1.15.0"; sha256="07zq9p2jkkzfjkccwryfh02xrz6bq20lw3z9v1pikk0dap6g1447"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase digest GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; }; - Rsamtools = derive2 { name="Rsamtools"; version="1.33.0"; sha256="0qp084lwadvwngn98lmlj758yra7il5sykdnxj82a4llr38fwg20"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges S4Vectors XVector zlibbioc]; }; - Rsubread = derive2 { name="Rsubread"; version="1.31.5"; sha256="14azrcgip829pm1aa6yq2s50zghf83l7mn7pizc98qjrlkwbia89"; depends=[]; }; + Rqc = derive2 { name="Rqc"; version="1.15.1"; sha256="0hb3115hrq4vgl32w01fagkbyisxxkbhs96fbxrz3rlkw982b636"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase digest GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; }; + Rsamtools = derive2 { name="Rsamtools"; version="1.33.7"; sha256="1jlhfjdby0cgsjfjcbf6kgcc8g1c6nfwlyp67yrn6x577cf9vl40"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges S4Vectors XVector zlibbioc]; }; + Rsubread = derive2 { name="Rsubread"; version="1.31.23"; sha256="1n59sxlfmwvk9yfp88lcffbqpbxdg5b1hgawkz0d3sy9f4wv6vg1"; depends=[]; }; Rtreemix = derive2 { name="Rtreemix"; version="1.43.0"; sha256="0wkszdsbpkai8snqvgr46mc0kqlgha76hclr4kbgddlbg9cmbymh"; depends=[Biobase graph Hmisc]; }; - S4Vectors = derive2 { name="S4Vectors"; version="0.19.17"; sha256="1cqv7lcgrqbvffmi8xw0pwwl2k3s6kyyfx4dhj05w42r5ax9wk0k"; depends=[BiocGenerics]; }; + S4Vectors = derive2 { name="S4Vectors"; version="0.19.24"; sha256="0r8plfk310jkymlpkxvkqh9b5y9xd00iy2jn28w5ajf7zxrdbxl2"; depends=[BiocGenerics]; }; SAGx = derive2 { name="SAGx"; version="1.55.0"; sha256="1xriaf6qhmisx7415jgrpk6p0jhhv0mn3ab1zj4g6dvm495s0579"; depends=[Biobase multtest]; }; SANTA = derive2 { name="SANTA"; version="2.19.0"; sha256="0qfzmsqssb62bab9csak82s0dhrrpz93q0825sdjk7sy2qnp3c6l"; depends=[igraph Matrix snow]; }; SBMLR = derive2 { name="SBMLR"; version="1.77.0"; sha256="0xhs5adrirlplm8m3ldsw0m085wqi7mgjn3c7ldkhmlr9w9vc7wg"; depends=[deSolve XML]; }; SC3 = derive2 { name="SC3"; version="1.9.1"; sha256="1nj5sjxgv0ic0s74w9vy3dwnrwywwj2kaydnn5s1p1hnrc6xsm11"; depends=[BiocGenerics cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov S4Vectors shiny SingleCellExperiment SummarizedExperiment WriteXLS]; }; SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.23.0"; sha256="1l7h4r4msq8gdiklmnb8cnh29babknzsbncxg3qkrf28q6gihz29"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; }; - SCnorm = derive2 { name="SCnorm"; version="1.3.0"; sha256="0zij0ny8xnmxcci08br3vb10dfmsxp11mgfr6f5ga8s868n09260"; depends=[BiocParallel cluster data_table forcats ggplot2 moments quantreg S4Vectors SummarizedExperiment]; }; - SDAMS = derive2 { name="SDAMS"; version="1.1.0"; sha256="0z6ajklzq6srlx2r4ymgpsgfzzg5qzypcza7kh0zfahg2pb262w4"; depends=[qvalue SummarizedExperiment trust]; }; + SCBN = derive2 { name="SCBN"; version="0.99.2"; sha256="10rcvn19k2034dgcc5lyv24ir5ql9qsikr5fplsp4qc4v9z8v658"; depends=[]; }; + SCnorm = derive2 { name="SCnorm"; version="1.3.3"; sha256="0vbyvvx3pf5k9j9fy0jkfawic3l54kj5sjmsgb1bb6b5x1njdz0h"; depends=[BiocParallel cluster data_table forcats ggplot2 moments quantreg S4Vectors SingleCellExperiment SummarizedExperiment]; }; + SDAMS = derive2 { name="SDAMS"; version="1.1.2"; sha256="0zd1y03g9dxflvj3adg2jqlzcipbaz87vm927l1cd3pdzgzvx294"; depends=[qvalue SummarizedExperiment trust]; }; SELEX = derive2 { name="SELEX"; version="1.13.0"; sha256="0n2xpdyr6sy8mnbq9vqccaphfa5pjbldcnmpm4zb9w2zdg27g24k"; depends=[Biostrings rJava]; }; SEPA = derive2 { name="SEPA"; version="1.11.0"; sha256="19904q9pxbxwaj8vfqk1nvwb5sn69g15zfk9xyb7wwnwxrrkph0r"; depends=[ggplot2 org_Hs_eg_db org_Mm_eg_db reshape2 segmented shiny topGO]; }; - SEPIRA = derive2 { name="SEPIRA"; version="1.1.0"; sha256="0wxk45lp7gdnshr4w4205khkq6dn09p7vr77s9hdz8968wj0rzg3"; depends=[corpcor limma]; }; + SEPIRA = derive2 { name="SEPIRA"; version="1.1.2"; sha256="1v6xqrvvnkf5r5cl6k4akq9450qhii0hwbysc76ndnwyc7lgmjws"; depends=[corpcor limma]; }; SGSeq = derive2 { name="SGSeq"; version="1.15.0"; sha256="09ksqyszgh84lwv0vzy8kp4vdhczdqpk1mr7h18ja5rpilnk60r0"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; }; SIAMCAT = derive2 { name="SIAMCAT"; version="1.1.0"; sha256="0aaw372yl2b74ni3hr788bqglma679vqfzhfad2903ln0lx54rl3"; depends=[beanplot glmnet gridBase gridExtra LiblineaR matrixStats mlr ParamHelpers phyloseq pROC PRROC RColorBrewer]; }; SICtools = derive2 { name="SICtools"; version="1.11.0"; sha256="1jgq6acqqfx6fcwkyqn49p94m399dblc86s3hf7xgdml61jjxa81"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; }; SIM = derive2 { name="SIM"; version="1.51.0"; sha256="0z23b4pgiyah5qcixhww7csmkq01gw0bd9hmzrwrn046yy3mmnql"; depends=[globaltest quantreg quantsmooth]; }; - SIMAT = derive2 { name="SIMAT"; version="1.13.0"; sha256="0kac998ddp94qls9jd68bd32cvnkxzdk63ysrcliiwmxcpplymrq"; depends=[ggplot2 mzR Rcpp reshape2]; }; - SIMLR = derive2 { name="SIMLR"; version="1.7.0"; sha256="0f8ds6qjkj2z79pl18pwgwsn5fp0k05s50kakfiy9cbmbhnqy9ik"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; }; + SIMAT = derive2 { name="SIMAT"; version="1.13.4"; sha256="142lafcpbmfnx1ywwas9dba4gz2vxnds4pia4dcxya6r254pbw9b"; depends=[ggplot2 mzR Rcpp reshape2]; }; + SIMD = derive2 { name="SIMD"; version="0.99.10"; sha256="17m05cvc1yzdjlyx7j971cais8lyacil2vjfl09vvj93ygfks1sy"; depends=[edgeR methylMnM statmod]; }; + SIMLR = derive2 { name="SIMLR"; version="1.7.4"; sha256="0pgz774i1ffix5s37qxxm78wa283zaghshwrj1chqzsk2hw1vy21"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; }; SISPA = derive2 { name="SISPA"; version="1.11.0"; sha256="1cw4xzcqjp8pdaglar9dfgr25zqyb6h31k3hn66hyxg9cyagj4k4"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; }; SLGI = derive2 { name="SLGI"; version="1.41.0"; sha256="0ihb43dmab2188641l5zpn98djj68mm5xq2v79wqrh136n9cam9j"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice ScISI]; }; SLqPCR = derive2 { name="SLqPCR"; version="1.47.0"; sha256="0m2qhkc6l158phg5hwfcs5wlq2n2nrhsjprrmzjv3q9rsdhwid8c"; depends=[]; }; SMAP = derive2 { name="SMAP"; version="1.45.0"; sha256="1i94sywcxp3pg30b93v5p9n70va1mixk67jxxfyhc6dlbfpx7d3y"; depends=[]; }; SMITE = derive2 { name="SMITE"; version="1.9.0"; sha256="1hvmbsz7p4ibjfh2a45aqpvv1kridkfg3zk3kzgbmws5l1vf154z"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGG_db org_Hs_eg_db plyr reactome_db S4Vectors scales]; }; SNAGEE = derive2 { name="SNAGEE"; version="1.21.0"; sha256="0lsb2rqb1a3dgfgv5bijgb87y3zdl3mp1p38nzzi05n180yrgpzr"; depends=[SNAGEEdata]; }; - SNPRelate = derive2 { name="SNPRelate"; version="1.15.0"; sha256="02xaxm3qrlgalndk4fmmvdy0rxpv565ysh2vc36gxcdvgz39pf1s"; depends=[gdsfmt]; }; + SNPRelate = derive2 { name="SNPRelate"; version="1.15.5"; sha256="19lzy5jcp64kvg569x0688v03jalpbigmxpbaqsyc61j9h3gqkh7"; depends=[gdsfmt]; }; SNPchip = derive2 { name="SNPchip"; version="2.27.0"; sha256="15cf2nrwixiqiyav5634qlv7md5dmv17h3z97j5771dv75fkl2gr"; depends=[Biobase foreach GenomeInfoDb GenomicRanges IRanges lattice oligoClasses S4Vectors SummarizedExperiment]; }; - SNPediaR = derive2 { name="SNPediaR"; version="1.7.0"; sha256="0van1q586n5dd5snvhc3j7hkdhdwrmbky9mj1nfdfzgcdl7bnmk3"; depends=[jsonlite RCurl]; }; + SNPediaR = derive2 { name="SNPediaR"; version="1.7.1"; sha256="1lly6gajffcia6kjb3bshy401w2ydrwj674kas3dipamchp7k7p9"; depends=[jsonlite RCurl]; }; SNPhood = derive2 { name="SNPhood"; version="1.11.0"; sha256="03dami2l6y21fh7sazh3bzjhj1n9vqc0fva4ig1kkdansd1bvp0f"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; SPEM = derive2 { name="SPEM"; version="1.21.0"; sha256="19l21yaqcazymnapqalrkb6az10jkmzy8zvp5wh28rb8bl2p88f3"; depends=[Biobase Rsolnp]; }; SPIA = derive2 { name="SPIA"; version="2.33.0"; sha256="06si8xr8hc4sr87gafaphv9rfiq9w82gwd4xzwn0js00fgalffvd"; depends=[KEGGgraph]; }; - SPLINTER = derive2 { name="SPLINTER"; version="1.7.2"; sha256="070ciavxg9y5mahaaaq7sbsz1zkv8llz69x6qvh332v0hchn29yg"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges plyr S4Vectors seqLogo stringr]; }; + SPLINTER = derive2 { name="SPLINTER"; version="1.7.4"; sha256="007h0y808cylwkr9bjgsdvf4d4bfvz0xpalh06drq666cr9cxdzr"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 googleVis Gviz IRanges plyr S4Vectors seqLogo stringr]; }; SPONGE = derive2 { name="SPONGE"; version="1.3.0"; sha256="0xnrzzlm12rrr54ymfa10pcmzgq7njqhgynv9ki9msxrvn1rhcd4"; depends=[Biobase data_table doRNG expm foreach glmnet gRbase igraph iterators logging MASS ppcor]; }; SQUADD = derive2 { name="SQUADD"; version="1.31.0"; sha256="0dh04i31lzdpkmqhawm1krn132hqj6qz5i6cj2sxxvk4chqq1xmf"; depends=[RColorBrewer]; }; SRAdb = derive2 { name="SRAdb"; version="1.43.2"; sha256="01nr09lkm4lwc6p0mfl1nn8g4fkzsw8c157snkcclqzn829121bp"; depends=[GEOquery graph RCurl RSQLite]; }; @@ -701,81 +751,86 @@ in with self; { STAN = derive2 { name="STAN"; version="2.9.0"; sha256="0i8y0a2i60irdg3061l4fmwdmnfrf0fc5byhx1bwbr8w5g4ahpnh"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; }; STATegRa = derive2 { name="STATegRa"; version="1.17.1"; sha256="1k55kb5x108iq3f2hbbair96x9kn8cci0753jkmd485j3mizfqq4"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; }; STRINGdb = derive2 { name="STRINGdb"; version="1.21.0"; sha256="079y5h2jfx40vr5yvvpafzzld1z7jc9z98gm31qy7gvm2lyzvgl5"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; }; - STROMA4 = derive2 { name="STROMA4"; version="1.5.0"; sha256="0b20pdxc3wsndqhhrxjayi3ldsjnim3cgswa73kjdpdrm3amsvy4"; depends=[Biobase BiocParallel cluster matrixStats]; }; + STROMA4 = derive2 { name="STROMA4"; version="1.5.2"; sha256="1c7cjzrvbb62j8lyq8fn6xl375yhzghw1a4zy6pp0s8sd1r6vpmn"; depends=[Biobase BiocParallel cluster matrixStats]; }; SVAPLSseq = derive2 { name="SVAPLSseq"; version="1.7.0"; sha256="0g27ik0m7z6wya7z2xgaip0c8dingv1c2jq9qbwpwipvk2yl8f50"; depends=[edgeR ggplot2 limma lmtest pls SummarizedExperiment]; }; SVM2CRM = derive2 { name="SVM2CRM"; version="1.13.0"; sha256="0bnd0bpxwd2c33xdp9bfn8lsvf9dm8an4n43py6akshf6q2l9x3y"; depends=[AnnotationDbi GenomicRanges IRanges LiblineaR mclust pls ROCR rtracklayer squash SVM2CRMdata verification zoo]; }; - SWATH2stats = derive2 { name="SWATH2stats"; version="1.11.4"; sha256="144p070bcq5j45byw9z666qkzjk8c4brscl4pnsgkghzgiv7fg34"; depends=[biomaRt data_table ggplot2 reshape2]; }; + SWATH2stats = derive2 { name="SWATH2stats"; version="1.11.7"; sha256="1j8c18kiijzz1sc28n4asspljdgxmd000ms6qq5pzac36gkjwn98"; depends=[biomaRt data_table ggplot2 reshape2]; }; SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.35.2"; sha256="0dzapl17bgykgsd9qapc1v0ihzn229n25zvagjp1kdx3r4jqmkbb"; depends=[]; }; ScISI = derive2 { name="ScISI"; version="1.53.0"; sha256="02m4ma2izak4vg4240hnny0b84x440myayjwqcysg8r5gr6pzd83"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; }; Scale4C = derive2 { name="Scale4C"; version="1.3.0"; sha256="1a97dchcinhp24k0r5f7agca33zk3qyh1scz8250aiilhfa4w37y"; depends=[GenomicRanges IRanges smoothie SummarizedExperiment]; }; - Sconify = derive2 { name="Sconify"; version="1.1.0"; sha256="0is0ix7591gjzpbnv388gnr2jnxbpbjvywv3ln61ign9p5h9gjva"; depends=[dplyr flowCore ggplot2 magrittr readr Rtsne tibble]; }; - SemDist = derive2 { name="SemDist"; version="1.15.0"; sha256="1rfmlihgk2wa1z3a2yqp43nddxw4nmjaybv9jvp84b0yi3drvn8z"; depends=[annotate AnnotationDbi GO_db]; }; - SeqArray = derive2 { name="SeqArray"; version="1.21.2"; sha256="0kkci67zrxlyhkbap9khn8655wl63h33004gkxzz1b3drvn0a95b"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; + Sconify = derive2 { name="Sconify"; version="1.1.3"; sha256="1v5g6w51xfh8gs026k68lhrkzp4fkd5bwkjr7vxlbxggwp523sia"; depends=[dplyr flowCore FNN ggplot2 magrittr readr Rtsne tibble]; }; + SemDist = derive2 { name="SemDist"; version="1.15.2"; sha256="1mqv1xj3wwadrvf7qv2fpqhjgmvlipsy8afljl67i2y5ik025svi"; depends=[annotate AnnotationDbi GO_db]; }; + SeqArray = derive2 { name="SeqArray"; version="1.21.8"; sha256="03mv656dyvpxpqpxayr0d5zd47zjk0rn20jj58ma0cyln2a1rly8"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; }; SeqGSEA = derive2 { name="SeqGSEA"; version="1.21.0"; sha256="10900fdl0g6izlpxwc3x2yix3cxpqfx6xxvbdq66mx2zqaksrq88"; depends=[Biobase biomaRt DESeq doParallel]; }; - SeqSQC = derive2 { name="SeqSQC"; version="1.3.0"; sha256="19jv3yyga2fxpndi0rr36vrjz694l97aabr3llkcw7a6mgk78g12"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges rbokeh RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; }; - SeqVarTools = derive2 { name="SeqVarTools"; version="1.19.2"; sha256="18l60hwj04hr8yln8rm1g0s71axxhnpkzn1khfr0v872csi57m8p"; depends=[Biobase dplyr gdsfmt GenomicRanges GWASExactHW IRanges logistf Matrix S4Vectors SeqArray tidyr]; }; + SeqSQC = derive2 { name="SeqSQC"; version="1.3.1"; sha256="0avzc9h0xabr2j54gbfpbj5dvf0yr690ckzj9phqz1g4xj16sa25"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges rbokeh RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; }; + SeqVarTools = derive2 { name="SeqVarTools"; version="1.19.4"; sha256="0cqf6lmqa0r9rzslcgrvfislkmf0cx5ylp6mqqxfzi09q7f74s6q"; depends=[Biobase dplyr gdsfmt GenomicRanges GWASExactHW IRanges logistf Matrix S4Vectors SeqArray tidyr]; }; ShortRead = derive2 { name="ShortRead"; version="1.39.0"; sha256="1cwpd5xf40gwpcnwmvxysxsl21cgfx3rdgigrawlzlzfd7j9kdig"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rsamtools S4Vectors XVector zlibbioc]; }; SigCheck = derive2 { name="SigCheck"; version="2.13.0"; sha256="1cbdry06knmycqyc7p0z598rxlyyrw6yc8an8qm74b9p8vbnwp1a"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; }; SigFuge = derive2 { name="SigFuge"; version="1.19.0"; sha256="07j9nzw5c4g99yf458n8jwkndr79mam2n4a6kcz9fpcsyjq4plp4"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; }; SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.19.0"; sha256="0916ml80crldixb8jn5sbzp156ba0r9lc7wc2ri8wmrslv3w97lv"; depends=[Biobase limma mclust Ringo]; }; - SingleCellExperiment = derive2 { name="SingleCellExperiment"; version="1.3.6"; sha256="0rlww0zvrkfjpx68qafvakbaa5lcjlyrp0phrsji4zh5niv0sy4x"; depends=[BiocGenerics S4Vectors SummarizedExperiment]; }; + SingleCellExperiment = derive2 { name="SingleCellExperiment"; version="1.3.12"; sha256="1f4c1ma86rzxxqfmyr6w29fmclm6yrmlinkvsdfs8g5ynvlr272m"; depends=[BiocGenerics S4Vectors SummarizedExperiment]; }; SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.17.0"; sha256="1xq3m2i0b9rklg741796i8n1x0d07mn3xbdmvlc3islh368661jw"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; }; - SpacePAC = derive2 { name="SpacePAC"; version="1.19.0"; sha256="10g626vyxaidiypjwymk183hvn4nm2vayvka127aavpfaq4ka55r"; depends=[iPAC]; }; - SparseSignatures = derive2 { name="SparseSignatures"; version="1.1.0"; sha256="1yhk7grm59ba7d7zwbqa9wlc00jzng9gdbaprpq9r5j6kj61id1z"; depends=[Biostrings BSgenome BSgenome_Hsapiens_1000genomes_hs37d5 data_table GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges NMF nnlasso nnls]; }; + SpacePAC = derive2 { name="SpacePAC"; version="1.19.3"; sha256="0i74bxw99bbs83zvs625pxqbjgkcp0jw076g3j6k5mqlhq98bj7i"; depends=[iPAC]; }; + SparseSignatures = derive2 { name="SparseSignatures"; version="1.1.5"; sha256="148x34p90x90lkl1ijj0s9gab3k295dbw2hyyy2hmx6hsmvp6hbl"; depends=[Biostrings BSgenome BSgenome_Hsapiens_1000genomes_hs37d5 data_table GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges NMF nnlasso nnls]; }; SpeCond = derive2 { name="SpeCond"; version="1.35.0"; sha256="0sqb84sa7yf34lwwkchh5wb3dp6n4wk8kzqmsydx5lsaz6fxg32r"; depends=[Biobase fields hwriter mclust RColorBrewer]; }; - SpidermiR = derive2 { name="SpidermiR"; version="1.11.0"; sha256="1gjjibc2lck5ihjm9k6vh032igvr5zw8dp1r0561cq00sd8w1y2v"; depends=[AnnotationDbi gdata ggplot2 gplots gridExtra httr igraph lattice latticeExtra miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; }; + SpidermiR = derive2 { name="SpidermiR"; version="1.11.1"; sha256="0mxl07rzcs9agly7hx8f1xyjwfv8bi7yq93y2jzw0bfmxnn7b0rr"; depends=[AnnotationDbi gdata ggplot2 gplots gridExtra httr igraph lattice latticeExtra miRNAtap miRNAtap_db networkD3 org_Hs_eg_db TCGAbiolinks visNetwork]; }; SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.21.0"; sha256="08n37qnhfk6j6gf0scm5m6i7q8ags821v4lp8aw670kij8xm4j5w"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; }; - StarBioTrek = derive2 { name="StarBioTrek"; version="1.7.0"; sha256="1fv0xdgzjmmsla8265732vc31drpija8wfdigg5cjhh89mrlpgfm"; depends=[AnnotationDbi e1071 igraph KEGGREST org_Hs_eg_db ROCR SpidermiR]; }; + StarBioTrek = derive2 { name="StarBioTrek"; version="1.7.1"; sha256="14a7rj8386iaqi3l47ahkpijh7bwwr8sir9ncmzj55fvk3m7c05g"; depends=[AnnotationDbi e1071 igraph KEGGREST org_Hs_eg_db ROCR SpidermiR]; }; Starr = derive2 { name="Starr"; version="1.37.0"; sha256="0is2fy9zf2cgl3ywkn89v7n134sh812gibr3mpb8iccplvis7dks"; depends=[affxparser affy MASS pspline Ringo zlibbioc]; }; Streamer = derive2 { name="Streamer"; version="1.27.0"; sha256="14wdvp51cgmzahqqr9dv5whgrl85yjj72sj1v3kqislqvfkn7lww"; depends=[BiocGenerics graph RBGL]; }; - SummarizedBenchmark = derive2 { name="SummarizedBenchmark"; version="1.99.1"; sha256="1madkjzhjlv7hh5av4pwkjk35vdmc5pcdsy70fngck4kvrhbs28z"; depends=[BiocGenerics BiocParallel crayon digest dplyr ggplot2 mclust rlang S4Vectors sessioninfo stringr SummarizedExperiment tibble tidyr UpSetR]; }; - SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.11.5"; sha256="19qrcp3psnx3dpkcif3i0dy8fgn4nwliqii8v7mjllh2v6vz71x4"; depends=[Biobase BiocGenerics DelayedArray GenomeInfoDb GenomicRanges IRanges Matrix S4Vectors]; }; - Sushi = derive2 { name="Sushi"; version="1.19.0"; sha256="1pqgrjprsifbf6whzw4y01sqwal35c160ibg49d5rn1r22lyqkc2"; depends=[biomaRt zoo]; }; - SwathXtend = derive2 { name="SwathXtend"; version="2.3.0"; sha256="1fzkbl4rl3w04z449m3y4dwq4lmqjll0xsqg88kr1jy7k0bzhfnv"; depends=[e1071 lattice openxlsx VennDiagram]; }; - SwimR = derive2 { name="SwimR"; version="1.19.0"; sha256="03qv3hcky138x449s5axc8j37j45hpalibmwwa3zd5a4fa15zmqr"; depends=[gplots heatmap_plus R2HTML signal]; }; - TCC = derive2 { name="TCC"; version="1.21.1"; sha256="0p2cphkmzlpzqy2shszyzwxga35hyp0q8n0aj9hbjzvapnil61pg"; depends=[baySeq DESeq DESeq2 edgeR ROC samr]; }; - TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.9.2"; sha256="1jbgv3p5dqhjkm5spn6x73z00ghjb1i4fbmn9xpns0v93axmd1k8"; depends=[biomaRt circlize ComplexHeatmap ConsensusClusterPlus data_table doParallel downloader dplyr EDASeq edgeR genefilter GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel ggthemes gridExtra httr IRanges jsonlite knitr limma matlab plyr R_utils RColorBrewer readr rvest S4Vectors scales selectr stringr SummarizedExperiment survival survminer sva tibble XML xml2]; }; - TCGAutils = derive2 { name="TCGAutils"; version="1.1.11"; sha256="1dmsjw34shqjhj59g4r3320pgh2hlssp8yb12mhcf21xs95a6pql"; depends=[BiocGenerics GenomeInfoDb GenomicDataCommons GenomicRanges IRanges MultiAssayExperiment rvest S4Vectors stringr SummarizedExperiment xml2]; }; + SummarizedBenchmark = derive2 { name="SummarizedBenchmark"; version="1.99.3"; sha256="00a6wnysxmxlanjh8zy3bycl9grvzlpsfc7p8qnslyz446dnqdp8"; depends=[BiocGenerics BiocParallel crayon digest dplyr ggplot2 mclust rlang S4Vectors sessioninfo stringr SummarizedExperiment tibble tidyr UpSetR]; }; + SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.11.6"; sha256="1wzp1yvn5vrfrr54v208i63rvb9awv7aplppv3lvwgk0j09hl4hh"; depends=[Biobase BiocGenerics DelayedArray GenomeInfoDb GenomicRanges IRanges Matrix S4Vectors]; }; + Sushi = derive2 { name="Sushi"; version="1.19.2"; sha256="12dz0l0lkvayqcvr21i2jdlpbfpvvd3rnzchar2yq7k7cwwa3v9s"; depends=[biomaRt zoo]; }; + SwathXtend = derive2 { name="SwathXtend"; version="2.3.1"; sha256="185rdcmdrahcmga3rkqniszg2i6scynspf7hh77q1ld7hi62ikcq"; depends=[e1071 lattice openxlsx VennDiagram]; }; + SwimR = derive2 { name="SwimR"; version="1.19.1"; sha256="1nbcan63p8jplrc1w7ljkmfisczgi9jg5rasdfm2iws5azpa36w9"; depends=[gplots heatmap_plus R2HTML signal]; }; + TCC = derive2 { name="TCC"; version="1.21.5"; sha256="140fhqn6yk8yayqhq47zpb6g3a1pwqhxdi6np5szz1h45scxzw01"; depends=[baySeq DESeq DESeq2 edgeR ROC]; }; + TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.9.5"; sha256="1lw67yvmhh24yh6rhanvpxp1ma9qwy8klia4py29jskw86vva3ca"; depends=[biomaRt circlize ComplexHeatmap ConsensusClusterPlus data_table doParallel downloader dplyr EDASeq edgeR genefilter GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel ggthemes gridExtra httr IRanges jsonlite knitr limma matlab plyr R_utils RColorBrewer readr rvest S4Vectors scales selectr stringr SummarizedExperiment survival survminer sva tibble XML xml2]; }; + TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.7.3"; sha256="0h4cax1nl2f1ly5q7019jsadfmpva5ykg3qhz9zak8vph8jbwxyv"; depends=[caret clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel IlluminaHumanMethylation27kanno_ilmn12_hg19 IlluminaHumanMethylation27kmanifest IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest maftools minfi pathview plotly readr shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks TCGAbiolinksGUI_data]; }; + TCGAutils = derive2 { name="TCGAutils"; version="1.1.24"; sha256="1564ssv2f3xkc0lg4k8a4jlccbad9y8zbqx2iyy9ib31rjcysswj"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicDataCommons GenomicFeatures GenomicRanges IRanges MultiAssayExperiment RaggedExperiment rvest S4Vectors stringr SummarizedExperiment xml2]; }; TCseq = derive2 { name="TCseq"; version="1.5.0"; sha256="1xir0481s72jwp0jnrb9134pv9vwy3g8mhk0rpzwr4qvxxxy7zxn"; depends=[BiocGenerics cluster e1071 edgeR GenomicAlignments GenomicRanges ggplot2 IRanges locfit reshape2 Rsamtools SummarizedExperiment]; }; TDARACNE = derive2 { name="TDARACNE"; version="1.31.0"; sha256="19qk0kc7yi4z8kqg7a9msxdiazad3y7xvshmf6pk0999ypacqws4"; depends=[Biobase GenKern Rgraphviz]; }; TEQC = derive2 { name="TEQC"; version="4.3.0"; sha256="1ldjq8ap4si95zqywhp27rzd8kgij2p9hvcb0w8qvzw2ndk950z4"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; }; TFARM = derive2 { name="TFARM"; version="1.3.0"; sha256="1c4gks6kvp8x68vnq7npxbq0q94gavbxvx3155prvx5qhsxw4jb8"; depends=[arules fields GenomicRanges stringr]; }; - TFBSTools = derive2 { name="TFBSTools"; version="1.19.1"; sha256="1mi591pydgvkj5qzjlssg1lqrkgn2in8cj43af1nm9am7l92gwkw"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DBI DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; }; - TFEA_ChIP = derive2 { name="TFEA.ChIP"; version="1.1.0"; sha256="07vwxy4sv8d8ij3cp7p17pvdf1nwbq883iqdjpcfb57ah67ffcx2"; depends=[biomaRt dplyr GenomicFeatures GenomicRanges IRanges org_Hs_eg_db R_utils TxDb_Hsapiens_UCSC_hg19_knownGene]; }; + TFBSTools = derive2 { name="TFBSTools"; version="1.19.3"; sha256="1zv3wid1jbjd8gn789an6khhsjw6kj10xzs1l2k3vji2ma4by4xd"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DBI DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; }; + TFEA_ChIP = derive2 { name="TFEA.ChIP"; version="1.1.1"; sha256="0n71va6mqdcgqagjr2ga5g7zrbp1a3xnl4hh3yjzsaa1g5fyx1yz"; depends=[biomaRt dplyr GenomicFeatures GenomicRanges IRanges org_Hs_eg_db R_utils TxDb_Hsapiens_UCSC_hg19_knownGene]; }; TFHAZ = derive2 { name="TFHAZ"; version="1.3.0"; sha256="1j03dp2n459b373ig3yds88f1x5yawr9jqr91w2s8smx5vqqicm8"; depends=[GenomicRanges IRanges S4Vectors]; }; - TFutils = derive2 { name="TFutils"; version="1.1.0"; sha256="04q54z0hrskz3grw1ayzvcj93r3ziba01sx359c9syh6hbwzl5cd"; depends=[AnnotationDbi AnnotationFilter Biobase data_table dplyr GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges GSEABase Gviz IRanges magrittr miniUI Rsamtools S4Vectors shiny]; }; + TFutils = derive2 { name="TFutils"; version="1.1.9"; sha256="097fn90mzyafhw27hc3m0dwyls7fc5d5c4rsrp0ris90c5m9lwbb"; depends=[dplyr magrittr miniUI shiny]; }; TIN = derive2 { name="TIN"; version="1.13.0"; sha256="0iphf37gff3m1hyvijbbpp46bmjvwdppqrrwgf1yj660r01cyvyl"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; }; TMixClust = derive2 { name="TMixClust"; version="1.3.0"; sha256="1ga7mxlaxv4hglixlqa3kjrvqikzc46mrs1435aihhf649h8zz6j"; depends=[Biobase BiocParallel cluster flexclust gss mvtnorm SPEM zoo]; }; - TPP = derive2 { name="TPP"; version="3.9.1"; sha256="183qdgly3a4xxiv1y8ckcm890dkg5rqyl99ab6pdgk3g53mx3pva"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown sme stringr tidyr VennDiagram VGAM]; }; - TRONCO = derive2 { name="TRONCO"; version="2.13.0"; sha256="117vq5ia5q68z5ymbvi5y010l4qpwxsbwm9xxx5jl49a86np8s6f"; depends=[bnlearn cgdsr circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; + TPP = derive2 { name="TPP"; version="3.9.6"; sha256="152hnfxadkcr0dirwxjx428r94pxsmb2j8fpw89mnblr0l28y36g"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown sme stringr tidyr VennDiagram VGAM]; }; + TRONCO = derive2 { name="TRONCO"; version="2.13.3"; sha256="0s57yxz8kdjg2rs3njlay7fan4v241nq6aqv9g08wkhnd60220av"; depends=[bnlearn cgdsr circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; }; TSCAN = derive2 { name="TSCAN"; version="1.19.0"; sha256="05zkydpl57j6b02bq0v3896612lbq33jbm896kimygbk4k2wa3g5"; depends=[combinat fastICA ggplot2 gplots igraph mclust mgcv plyr shiny]; }; - TSRchitect = derive2 { name="TSRchitect"; version="1.7.1"; sha256="06vzd7vs9ld714jhzdd46ippdmzmwfg705kky2wrcz6lq547llgp"; depends=[AnnotationHub BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; + TSRchitect = derive2 { name="TSRchitect"; version="1.7.2"; sha256="0fprnylwnwrbya0zpya578ljxwj2xbrnbwwc9qb31nanhwr7p68a"; depends=[AnnotationHub BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; TSSi = derive2 { name="TSSi"; version="1.27.0"; sha256="1a4xvqmbx2wlhad1pb6013sas5gqm27kc7jhyqp49ccbwm7ayz4r"; depends=[Biobase BiocGenerics Hmisc IRanges minqa plyr S4Vectors]; }; TTMap = derive2 { name="TTMap"; version="1.3.0"; sha256="0fg0d930icbm62rvfv0d177ld126f1shm5knird50da4vx3qr1a9"; depends=[Biobase colorRamps rgl SummarizedExperiment]; }; TVTB = derive2 { name="TVTB"; version="1.7.0"; sha256="1514rfqdrp3s1z4zf53zprslqdbsdl1w3crfbqgsv6hisqrrwlm2"; depends=[AnnotationFilter BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges GGally ggplot2 Gviz IRanges limma reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; }; - TarSeqQC = derive2 { name="TarSeqQC"; version="1.11.0"; sha256="1gbvfn5vpsbfbvpif8lvq55aav6ak619s1f743c7xj9md84rhx59"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; }; + TarSeqQC = derive2 { name="TarSeqQC"; version="1.11.2"; sha256="0h8vpdy4ja0i8jpdk87qk2dkfrz4izg2m7lgqx18fl490plii1bk"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; }; TargetScore = derive2 { name="TargetScore"; version="1.19.0"; sha256="1phdg2ncvsjgjsfggxv37n74fwj8asw73vccb8iaqj8x7vlkci85"; depends=[Matrix pracma]; }; - TargetSearch = derive2 { name="TargetSearch"; version="1.37.2"; sha256="065nq07xwdb8s7n4gg0bwdpbasdank6ga9nza25x0lsf1m4kky8r"; depends=[ncdf4]; }; - TissueEnrich = derive2 { name="TissueEnrich"; version="1.1.0"; sha256="12j0wkw964pbq62hiiavjk172hr3yp333v6c6g5kxmv2vycbxb3m"; depends=[dplyr ensurer ggplot2 GSEABase SummarizedExperiment tidyr]; }; - TitanCNA = derive2 { name="TitanCNA"; version="1.19.0"; sha256="12c30v6f9i841jyfprn3bxm9dimczwvn5d846kjxmpghf3dgdlgi"; depends=[data_table dplyr foreach GenomeInfoDb GenomicRanges IRanges Rsamtools VariantAnnotation]; }; + TargetSearch = derive2 { name="TargetSearch"; version="1.37.8"; sha256="1cgk9sg5d0m0njs75lj5c9kz5agyy89xn4vfznh2j06w6l60dvil"; depends=[ncdf4]; }; + TissueEnrich = derive2 { name="TissueEnrich"; version="1.1.9"; sha256="11254f58mqhwa54kz83iac5sblcbpz6myw8gkwg06gx393yald22"; depends=[dplyr ensurer ggplot2 GSEABase SummarizedExperiment tidyr]; }; + TitanCNA = derive2 { name="TitanCNA"; version="1.19.1"; sha256="0j84k2bysiizbzr5mfsnv7xmcmi74m7x8a14i375mahp6x9krp4v"; depends=[data_table dplyr foreach GenomeInfoDb GenomicRanges IRanges Rsamtools VariantAnnotation]; }; + TnT = derive2 { name="TnT"; version="1.3.6"; sha256="0j64j32v1d83qqil3bfb6zxlp4k92qr6khzak5lkk7vdkhpbpckk"; depends=[Biobase data_table GenomeInfoDb GenomicRanges htmlwidgets IRanges jsonlite knitr S4Vectors]; }; ToPASeq = derive2 { name="ToPASeq"; version="1.15.1"; sha256="13wzyspyipi122g976hp2haqyjhhgnwpaj844w2by8x65nh1hicl"; depends=[graph graphite Rcpp]; }; - TransView = derive2 { name="TransView"; version="1.25.0"; sha256="1vlfncr2qv03r0b695ya47dd6h2m6qcvzndag1rqi5zzdn6p0w4q"; depends=[BiocGenerics GenomicRanges gplots IRanges Rsamtools S4Vectors zlibbioc]; }; - Trendy = derive2 { name="Trendy"; version="1.3.2"; sha256="09r1slmx8cr8hc8nz5kkhd25mp19nk3mvlsg3c15lx39n5pimnhs"; depends=[BiocParallel DT gplots magrittr S4Vectors segmented shiny shinyFiles SummarizedExperiment]; }; + TransView = derive2 { name="TransView"; version="1.25.2"; sha256="0b1bx8smkfp5a282rrmlmqgfgfkiqsvzn6jnkvgn4v3pq7w3752c"; depends=[BiocGenerics GenomicRanges gplots IRanges Rsamtools S4Vectors zlibbioc]; }; + Trendy = derive2 { name="Trendy"; version="1.3.11"; sha256="01k4ryaymr3c6m3gfdqv1wq8g47x5sr4vcnp6x92gcnncmm8m1qh"; depends=[BiocParallel DT gplots magrittr S4Vectors segmented shiny shinyFiles SummarizedExperiment]; }; TurboNorm = derive2 { name="TurboNorm"; version="1.29.0"; sha256="15k6cxxwjkb56r9b1r17va2ssq4da7z72dvvgj91bd3x6vqph13q"; depends=[affy convert lattice limma marray]; }; - TxRegInfra = derive2 { name="TxRegInfra"; version="1.1.2"; sha256="18ymkwfarxfh56y4gg2fh72fccgi2xyjnb4091bgfsg8nvib6wbv"; depends=[BiocParallel GenomeInfoDb GenomicRanges IRanges mongolite RaggedExperiment rjson S4Vectors SummarizedExperiment]; }; + TxRegInfra = derive2 { name="TxRegInfra"; version="1.1.4"; sha256="1fv107daivcila7j3wkgc413138jza7s8x5g9ksgyr8kxjfs9w7b"; depends=[BiocParallel GenomeInfoDb GenomicRanges IRanges mongolite RaggedExperiment rjson S4Vectors SummarizedExperiment]; }; TypeInfo = derive2 { name="TypeInfo"; version="1.47.0"; sha256="1nh15bs814s09cck4829r48n18g0w4haglbn826razjrcj5k46y0"; depends=[]; }; UNDO = derive2 { name="UNDO"; version="1.23.0"; sha256="0csl0kh2ksswmv53cmy10b35ns5l9yg917m99f9pjrnql1n3ciq6"; depends=[Biobase BiocGenerics boot MASS nnls]; }; - Ularcirc = derive2 { name="Ularcirc"; version="0.99.20"; sha256="1i48shbv1cwl1z4czpzc53iyab0d04aqw4w27w9cnvzxqs9fc0aj"; depends=[AnnotationHub Biostrings BSgenome data_table DT GenomeInfoDb GenomeInfoDbData GenomicFeatures gsubfn httpuv mirbase_db moments shiny shinyFiles Sushi yaml]; }; - UniProt_ws = derive2 { name="UniProt.ws"; version="2.21.3"; sha256="1ifzfghq7kk6s3wagjsvc1qz9gldfypgmniiw8pcsm1sji1y31ps"; depends=[AnnotationDbi BiocFileCache BiocGenerics rappdirs RCurl RSQLite]; }; - Uniquorn = derive2 { name="Uniquorn"; version="2.1.0"; sha256="0livhr3kqjhh7s45fahvmshk7f6bbakpx58x16l7vclb1dlzkhii"; depends=[data_table doParallel foreach GenomicRanges IRanges R_utils stringr VariantAnnotation WriteXLS]; }; - VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.27.1"; sha256="1m3bjqif7kwnwwry5zdm74jysq8pnxzkgkdf75bjgw08gg6ykd6j"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; }; - VariantFiltering = derive2 { name="VariantFiltering"; version="1.17.1"; sha256="0gfvnbs9wh4g3z029b6h5pjky84iz4i9ijmg0kz83v2xybnv1n34"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores graph Gviz IRanges RBGL Rsamtools S4Vectors shiny shinyjs shinythemes shinyTree SummarizedExperiment VariantAnnotation XVector]; }; + Ularcirc = derive2 { name="Ularcirc"; version="0.99.24"; sha256="0dq4lwx2q6lga1cd9smqrmngvsd26xj83amfhg8192jg6jys9i70"; depends=[AnnotationHub Biostrings BSgenome data_table DT GenomeInfoDb GenomeInfoDbData GenomicFeatures gsubfn httpuv mirbase_db moments shiny shinyFiles Sushi yaml]; }; + UniProt_ws = derive2 { name="UniProt.ws"; version="2.21.4"; sha256="1dsz47zs47mqrijiybs4p1syrf975ff2g1waxpcixbi3jr20gq80"; depends=[AnnotationDbi BiocFileCache BiocGenerics rappdirs RCurl RSQLite]; }; + Uniquorn = derive2 { name="Uniquorn"; version="2.1.4"; sha256="13xgw133kbrmm1idb21hdgm2mn619gvwq1k5bk6nw9m3qcwnp69l"; depends=[data_table doParallel foreach GenomicRanges IRanges R_utils stringr VariantAnnotation WriteXLS]; }; + VanillaICE = derive2 { name="VanillaICE"; version="1.43.4"; sha256="0wdmcmynsrk6ir4sxmgdpvsfdqnb1cgjc3n7vvsa8rsa6b22a15d"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice matrixStats oligoClasses S4Vectors SummarizedExperiment]; }; + VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.27.9"; sha256="0vh50jil9ksjs6d9d9f457v31s8l4rn8cdm0wamj71gcdmp9x2f7"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; }; + VariantFiltering = derive2 { name="VariantFiltering"; version="1.17.3"; sha256="16jgpja0mxlb2sny6ccnc4aqvgxkl1kna3j8dnn5gyxbd11vzxri"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores graph Gviz IRanges RBGL Rsamtools S4Vectors shiny shinyjs shinythemes shinyTree SummarizedExperiment VariantAnnotation XVector]; }; VariantTools = derive2 { name="VariantTools"; version="1.23.0"; sha256="1kr4w5c1rwsamb168ahj74f379rk87qldm2mivhn73zq75qrawaf"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; - Vega = derive2 { name="Vega"; version="1.29.0"; sha256="1zjdhszz65wpjirakkl53a4jqh43z6ryvndf0hxal4gc586gifcd"; depends=[]; }; - VegaMC = derive2 { name="VegaMC"; version="3.19.0"; sha256="1c4vfm2vv2xm6yw2ca57ml9bn6n9ddc2p8pcbxivxkxc8b5n2ysn"; depends=[Biobase biomaRt genoset]; }; - XBSeq = derive2 { name="XBSeq"; version="1.13.0"; sha256="014c96hz2nqjz865xmbhcsqqxxgssd9rn1j1pgmxakkz87mcnvji"; depends=[Biobase DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; }; - XDE = derive2 { name="XDE"; version="2.27.0"; sha256="1mls0fx2z2n7izmrmhpv6jg87x36d1j9x6gq51hhkzw5rbq25ng6"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools MergeMaid mvtnorm RColorBrewer siggenes]; }; - XVector = derive2 { name="XVector"; version="0.21.3"; sha256="12p9s5d10cpm86v202gdw6y9gnsmcsny43gv6qnhz48ilzwql4mc"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; + Vega = derive2 { name="Vega"; version="1.29.1"; sha256="04yvxrv7m78dxg2k7pjcz6hz4clywb2lrldqs6pixyli2ifal8fq"; depends=[]; }; + VegaMC = derive2 { name="VegaMC"; version="3.19.1"; sha256="1dah8j41qd9ym00nlv8k0kpz3vsl7y3f6h4nyzv8bwa3nf9ip9qy"; depends=[Biobase biomaRt genoset]; }; + Wrench = derive2 { name="Wrench"; version="0.99.10"; sha256="1wm4zrh8wiyvjw246a4xwc3y278qyyvgx02n7kgnwznzg6wvh05s"; depends=[limma locfit matrixStats]; }; + XBSeq = derive2 { name="XBSeq"; version="1.13.1"; sha256="1dkwk181glpqq3g6ks5mpx39p106a8vkhky40hh7zny1pdycbzzh"; depends=[Biobase DESeq2 dplyr ggplot2 locfit magrittr matrixStats pracma roar]; }; + XDE = derive2 { name="XDE"; version="2.27.1"; sha256="1kj5wdn3w49zzi43hp8qs17v173nlgf215hm5pjy6l6pgvjjffjm"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools MergeMaid mvtnorm RColorBrewer siggenes]; }; + XINA = derive2 { name="XINA"; version="0.99.13"; sha256="1vyawdy8z1lisnpfdy6rxmkbjxzs9dzb5f8i6wqiyx726z68fcpc"; depends=[alluvial Biobase ggplot2 gridExtra igraph mclust plyr STRINGdb]; }; + XVector = derive2 { name="XVector"; version="0.21.4"; sha256="1zb01pi6dm424ky95sli7h0a2qy2px6as0bz9ic48b3nwd7az2mn"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; }; YAPSA = derive2 { name="YAPSA"; version="1.7.0"; sha256="1ny51v4papa067aylq7njyi2f17yp44y955szpark0lj0p759vjb"; depends=[circlize ComplexHeatmap corrplot dendextend GenomeInfoDb GenomicRanges GetoptLong ggplot2 gridExtra gtrellis KEGGREST lsei PMCMR reshape2 SomaticSignatures VariantAnnotation]; }; a4 = derive2 { name="a4"; version="1.29.0"; sha256="0anj0gkbiccvb93xqzi7k1xxw2kqlwcf82pf4pqadc2fvmb1yfd7"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; }; a4Base = derive2 { name="a4Base"; version="1.29.0"; sha256="03lnbfg94xwrib8g40y4bazp122zy9nnpv4v1m18wjc10hi7z7qp"; depends=[a4Core a4Preproc annaffy AnnotationDbi Biobase genefilter glmnet gplots limma mpm multtest]; }; @@ -784,106 +839,117 @@ in with self; { a4Preproc = derive2 { name="a4Preproc"; version="1.29.0"; sha256="1yhdsx23rd1mihj18jwvb7rl6kgyvbh4a75lsv0faqvsh9bk2k77"; depends=[AnnotationDbi]; }; a4Reporting = derive2 { name="a4Reporting"; version="1.29.0"; sha256="1m79clrlf0f5f108vyamy2ia8sbxi3mm2kf8ckhbbsr6qgmnqcsb"; depends=[annaffy xtable]; }; aCGH = derive2 { name="aCGH"; version="1.59.0"; sha256="17nqy2sgkvjzhm3l8ypg93i7yzsniy536b2wz7rd6km52spldp7r"; depends=[Biobase cluster multtest survival]; }; + abseqR = derive2 { name="abseqR"; version="0.99.11"; sha256="1fzcchzxzpmiv2az8cg7nyx4pxkabfviyzm2nyx36kbyl4mfhwbb"; depends=[BiocParallel BiocStyle circlize flexdashboard ggcorrplot ggdendro ggplot2 gridExtra knitr plotly plyr png RColorBrewer reshape2 rmarkdown stringr vegan VennDiagram]; }; acde = derive2 { name="acde"; version="1.11.0"; sha256="18551wkanalxk32g37j2yg766qgddsxid0lzv2rb61gqjb7qrmpa"; depends=[boot]; }; adSplit = derive2 { name="adSplit"; version="1.51.0"; sha256="1azczbx6w17a1awwpfc1bbgx14562mr41mgii7skm9r8jb9pxn4n"; depends=[AnnotationDbi Biobase cluster GO_db KEGG_db multtest]; }; - adaptest = derive2 { name="adaptest"; version="1.1.0"; sha256="0ddrkkh8mh3fq65dz6rrxm9wykyalwa90jf5vb0kllgjd3n6hvk8"; depends=[calibrate origami SummarizedExperiment tmle]; }; - affxparser = derive2 { name="affxparser"; version="1.53.0"; sha256="1n81df9451r3pixakgjwi4zqna7gp0s9v6qrjpyw71294swi169f"; depends=[]; }; - affy = derive2 { name="affy"; version="1.59.0"; sha256="1z57jn6l79jwks0j64m63s5h4kxdxg08qjmi646765xlf3xi746j"; depends=[affyio Biobase BiocGenerics BiocInstaller preprocessCore zlibbioc]; }; + adaptest = derive2 { name="adaptest"; version="1.1.1"; sha256="02dlhbnfl11x8hpampzz2d76i958k6lm4d3yc4kicpdsl5vmv6mk"; depends=[calibrate origami SummarizedExperiment tmle]; }; + affxparser = derive2 { name="affxparser"; version="1.53.2"; sha256="15i7rnwhc602y2c2i0h07z7fw29ynjq0jw1hqsjinw5df4afnxj7"; depends=[]; }; + affy = derive2 { name="affy"; version="1.59.1"; sha256="08fppshnnj1rxjd0kkmlrsz9nhqllzbzha5r1jbcly1f3dgy0799"; depends=[affyio Biobase BiocGenerics BiocManager preprocessCore zlibbioc]; }; affyContam = derive2 { name="affyContam"; version="1.39.0"; sha256="1mh1yqrdh47ggqibgghnlmjfq46n0w4q1hdji7cv1js6kry7wqcf"; depends=[affy affydata Biobase]; }; affyILM = derive2 { name="affyILM"; version="1.33.0"; sha256="0q41aznln8kngmv0q6036zvzbbk5sw46lhmss3npk7r6q0ryyvwr"; depends=[affxparser affy Biobase gcrma]; }; affyPLM = derive2 { name="affyPLM"; version="1.57.0"; sha256="17vy0knf0vb3l824q2ib4hp0izw4s8phbjalsrzbwvmm7gg25xv7"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; }; affyPara = derive2 { name="affyPara"; version="1.41.0"; sha256="1j81wl9ivx24jag4jnnv6viblpqba72c72nmcxs60cdqq44vs87h"; depends=[affy affyio aplpack snow vsn]; }; affyQCReport = derive2 { name="affyQCReport"; version="1.59.0"; sha256="16sz9rii38vph2qiplab0f7fakd2vl77df543mfiykk3w5f0why2"; depends=[affy affyPLM Biobase genefilter lattice RColorBrewer simpleaffy xtable]; }; affycomp = derive2 { name="affycomp"; version="1.57.0"; sha256="167bgzq82zsl2mdgzai95msh188j10hwrmp4bqab5qh9h2s8phvb"; depends=[Biobase]; }; - affycoretools = derive2 { name="affycoretools"; version="1.53.2"; sha256="10zr09sqg6yf5f22qy0157qp03c479lxcdlippxawsq3x5dag533"; depends=[affy AnnotationDbi Biobase BiocGenerics DBI edgeR gcrma ggplot2 GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; }; + affycoretools = derive2 { name="affycoretools"; version="1.53.4"; sha256="13vacl5a4rnizn6pgchyd8xxpf3sd4cdwxfyvmslwaci4dh0mlk5"; depends=[affy AnnotationDbi Biobase BiocGenerics DBI edgeR gcrma ggplot2 GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; }; affyio = derive2 { name="affyio"; version="1.51.0"; sha256="1p10bycid4dlhxhllalffywrc06xj1qjzs9f9fvj1y1yzj3xgmqz"; depends=[zlibbioc]; }; - affylmGUI = derive2 { name="affylmGUI"; version="1.55.2"; sha256="0i0psf8rp2ars1ibb13vchmgapb8mf1smmabgb54c8gmd3lzx6js"; depends=[affy affyio affyPLM BiocGenerics BiocInstaller gcrma limma R2HTML tkrplot xtable]; }; + affylmGUI = derive2 { name="affylmGUI"; version="1.55.3"; sha256="0x6f92w8gqk2vs2p3walg2f0z0vx0gkiyz1jpnq01lz9zklwvhq9"; depends=[affy affyio affyPLM BiocGenerics BiocManager gcrma limma R2HTML tkrplot xtable]; }; affypdnn = derive2 { name="affypdnn"; version="1.55.0"; sha256="11gwlr0ghw5c0977sgyhvghb953cgppp3vz3g1gfd3mdgkckvpqw"; depends=[affy]; }; agilp = derive2 { name="agilp"; version="3.13.0"; sha256="1z7bxkdmqpz4kn1m2z91knnp36mp7z5awzj6qqwj7xwydc85m8np"; depends=[]; }; alpine = derive2 { name="alpine"; version="1.7.0"; sha256="0d5r1izkx7lvl9f7sy0sy97mpvxaj05010vxmgw0c5yfpzzi3hz1"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; }; alsace = derive2 { name="alsace"; version="1.17.0"; sha256="0p17f29n1z3n4x2rpv4hja10aq5349653ra4hwl5fbli3fa0ww43"; depends=[ALS ptw]; }; altcdfenvs = derive2 { name="altcdfenvs"; version="2.43.0"; sha256="1md8rb732bpsxs1r1mgvd9f98ixg596rn28pw6pq8bl8hj5jh3l9"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; }; - ampliQueso = derive2 { name="ampliQueso"; version="1.19.0"; sha256="0nvwvvrm41vi289zp86s4yb0b6z9i54gq43vmvk1jh556rg1wsh6"; depends=[DESeq doParallel edgeR foreach genefilter ggplot2 gplots knitr rgl rnaSeqMap samr statmod VariantAnnotation xtable]; }; - amplican = derive2 { name="amplican"; version="1.3.1"; sha256="16h9py6yl6nb2203wk00g0lvgkic4f9xdwzrxdq9rk1mlnmjbyd2"; depends=[BiocGenerics BiocParallel Biostrings clusterCrit data_table dplyr GenomeInfoDb GenomicRanges ggforce ggplot2 ggthemes gridExtra gtable IRanges knitr Matrix matrixStats rmarkdown S4Vectors ShortRead stringr waffle]; }; - anamiR = derive2 { name="anamiR"; version="1.9.0"; sha256="07xldx4dqc3s5vrankh1swg8a4hy50ihiw5wx5ndxvkpig8sspr8"; depends=[agricolae DBI DESeq2 gage gplots limma lumi RMySQL S4Vectors SummarizedExperiment]; }; + ampliQueso = derive2 { name="ampliQueso"; version="1.19.4"; sha256="0nznv4cdjxr1lcr4cf2jpipcqn9s90kd97rqnv5kild2yv8srbhq"; depends=[DESeq doParallel edgeR foreach genefilter ggplot2 gplots knitr rgl rnaSeqMap samr statmod VariantAnnotation xtable]; }; + amplican = derive2 { name="amplican"; version="1.3.5"; sha256="0yf9wjgg22ry89cs9in66gwfana8c9cqaq7anfkpa3ng27llakd7"; depends=[BiocGenerics BiocParallel Biostrings clusterCrit data_table dplyr GenomeInfoDb GenomicRanges ggforce ggplot2 ggthemes gridExtra gtable IRanges knitr Matrix matrixStats rmarkdown S4Vectors ShortRead stringr waffle]; }; + anamiR = derive2 { name="anamiR"; version="1.9.2"; sha256="0l0lgan8zs04dyk972prvdng4xb8rig5g9rv55z1pplxvla4grqk"; depends=[agricolae DBI DESeq2 gage gplots limma lumi RMySQL S4Vectors SummarizedExperiment]; }; annaffy = derive2 { name="annaffy"; version="1.53.0"; sha256="0z97liznk6by9a7klw0wirpchd9n57ycsf80xsprnlgy60slypvc"; depends=[AnnotationDbi Biobase DBI GO_db KEGG_db]; }; annmap = derive2 { name="annmap"; version="1.23.0"; sha256="0m74p8zrqhyfgpbqf4s98174y7gz9p1nh9q272xbsqn8ckdk8c0a"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; }; - annotate = derive2 { name="annotate"; version="1.59.0"; sha256="0m384l8asvl2kswaar408w08yps7n822pfsxqby8igblrfzjgxjq"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl XML xtable]; }; + annotate = derive2 { name="annotate"; version="1.59.1"; sha256="016sgwqd0s3jhpqw4056y0xa7p1jc99i8b7biq754vzzbapjvyb0"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl XML xtable]; }; annotationTools = derive2 { name="annotationTools"; version="1.55.0"; sha256="18rxyi7sx93l52agbxnla1b7gn2bk3fpby0qj224nqinydjxkmjj"; depends=[Biobase]; }; - annotatr = derive2 { name="annotatr"; version="1.7.1"; sha256="0ccad82zrdy028dyycsvbcdijh2xl1ibjqz36wfnnnipxwc9fq89"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges readr regioneR reshape2 rtracklayer S4Vectors]; }; + annotatr = derive2 { name="annotatr"; version="1.7.2"; sha256="0q18fmb7wbbhqm3rwgf3d3cm9rpryrybv35jglsjsa3ca7y0550d"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges readr regioneR reshape2 rtracklayer S4Vectors]; }; anota = derive2 { name="anota"; version="1.29.0"; sha256="1najgyj4qn9954jxbq0c4psarsq8mrg6fz0w3p9vmcm68l8lz3ig"; depends=[multtest qvalue]; }; - anota2seq = derive2 { name="anota2seq"; version="1.3.0"; sha256="0kr5wm6sirkycp0f017vqialqzzjadyfkm2fpv2zj6v8acnv3704"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; }; + anota2seq = derive2 { name="anota2seq"; version="1.3.1"; sha256="1gp5f852kiz1ck19iasvkm1idgdcv636jdkmfp4j76r7k3vjzk36"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; }; antiProfiles = derive2 { name="antiProfiles"; version="1.21.0"; sha256="166mx0y4b3j1vd3daxr9wd48d007qh1sj1vjssjfails6j4sy9lh"; depends=[locfit matrixStats]; }; apComplex = derive2 { name="apComplex"; version="2.47.0"; sha256="0pqgrzfvljvinsalki5sc31c38k959g5gzag7sn33iilqw7s8grx"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; }; - apeglm = derive2 { name="apeglm"; version="1.3.0"; sha256="1y9g9s68fqiinr2lwx10s5m533ccgbpzh4wqlf7nbjw696vshjnb"; depends=[emdbook GenomicRanges Rcpp RcppEigen RcppNumerical SummarizedExperiment]; }; + apeglm = derive2 { name="apeglm"; version="1.3.2"; sha256="1w7g7vfzqs109b2bihw7vgsyxrc65j31zlxf4v9bn5y144hzrn2j"; depends=[emdbook GenomicRanges Rcpp RcppEigen RcppNumerical SummarizedExperiment]; }; + appreci8R = derive2 { name="appreci8R"; version="0.99.5"; sha256="0jr8qfrxdigddw1nwlzgqs7whzvs5h1c8xzmlzrbwrzn3ymgka54"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 COSMIC_67 DT GenomicFeatures GenomicRanges GenomicScores Homo_sapiens IRanges MafDb_1Kgenomes_phase3_hs37d5 MafDb_ESP6500SI_V2_SSA137_hs37d5 MafDb_ExAC_r1_0_hs37d5 MafDb_gnomADex_r2_0_1_hs37d5 openxlsx PolyPhen_Hsapiens_dbSNP131 rentrez Rsamtools rsnps S4Vectors seqinr shiny shinyjs SIFT_Hsapiens_dbSNP137 SNPlocs_Hsapiens_dbSNP144_GRCh37 stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation XtraSNPlocs_Hsapiens_dbSNP144_GRCh37]; }; + aroma_light = derive2 { name="aroma.light"; version="3.11.2"; sha256="0m03zkil79axvrmvaaimlv5pas6h19ylc4l5pm7f2xnc5150n8vp"; depends=[matrixStats R_methodsS3 R_oo R_utils]; }; arrayMvout = derive2 { name="arrayMvout"; version="1.39.0"; sha256="1yrqx8vkbhwsdh0x3ig5wmy3ynx56154wgc69hzssvw38jdlp9vy"; depends=[affy affyContam Biobase lumi mdqc parody simpleaffy]; }; arrayQuality = derive2 { name="arrayQuality"; version="1.59.0"; sha256="1nhavhn4vnxvmj2hw8qlrnbyp3nsv3m90qcj20ijiv85jkr10mpa"; depends=[gridBase hexbin limma marray RColorBrewer]; }; - arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.37.0"; sha256="0bd78q63gsnh0bfspif6zgkp77wf634xcq6h53ka96qs7d98nxcv"; depends=[affy affyPLM beadarray Biobase Cairo genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG vsn XML]; }; + arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.37.1"; sha256="1pn3q37dmx2drqiq9k1y0s9n9hmh5njp70ljgkf4z83a3wwgz6fk"; depends=[affy affyPLM beadarray Biobase Cairo genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG vsn XML]; }; + artMS = derive2 { name="artMS"; version="0.99.101"; sha256="0id199zy5cmbjap8zwp2if5hnr20cbsk9fsvfvkvg29pa01bi3x0"; depends=[AnnotationDbi biomaRt bit64 circlize cluster ComplexHeatmap corrplot data_table dplyr factoextra FactoMineR getopt ggdendro ggplot2 ggrepel gplots gProfileR limma MSstats openxlsx org_Hs_eg_db org_Mm_eg_db PerformanceAnalytics pheatmap plotly plyr RColorBrewer reshape2 seqinr stringr tidyr UpSetR VennDiagram yaml]; }; attract = derive2 { name="attract"; version="1.33.2"; sha256="15mrqxcqflm3f77s336dyh8q57ipr27ca81aap6pwfxgpqykay49"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; }; bacon = derive2 { name="bacon"; version="1.9.0"; sha256="018082c3g5cdi3i1z1q26cq4v1f529d1c2q92p6qyzblcs8m2j2m"; depends=[BiocParallel ellipse ggplot2]; }; - ballgown = derive2 { name="ballgown"; version="2.13.0"; sha256="16x4bh9wdqw5isia1vwi8kynlfaxvvc808lnbdkz8964rfxn317i"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; }; - bamsignals = derive2 { name="bamsignals"; version="1.13.1"; sha256="1jyf9arivqk42zsj9k3fgjvz7d8ixlm2irsac4vkfjvr8nrfssyr"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; }; - banocc = derive2 { name="banocc"; version="1.5.0"; sha256="1i86y34yhcaadl7ans6ypcr5yprqlnl4fl0bmr1k28pd8knwgq70"; depends=[coda mvtnorm rstan stringr]; }; + ballgown = derive2 { name="ballgown"; version="2.13.1"; sha256="16464any97gpy6jmg61w58cryfd4z0c7qrq29vb28pbfxiwv4mmz"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; }; + bamsignals = derive2 { name="bamsignals"; version="1.13.2"; sha256="1w8jqk8iz63cfhnbnf2r4k15052kp2cyq6da9zl4my9kc237nr14"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; }; + banocc = derive2 { name="banocc"; version="1.5.2"; sha256="1sdj9gd43a7pz8sbzm0l9d7ifsmdpgksq6f52zs06blsy31aca99"; depends=[coda mvtnorm rstan stringr]; }; basecallQC = derive2 { name="basecallQC"; version="1.5.0"; sha256="1g6hisqbg41kwz16iw7ai2rbw6hvndv560m7jxa85cm3kl9s5dxh"; depends=[data_table dplyr DT ggplot2 knitr lazyeval magrittr prettydoc raster rmarkdown ShortRead stringr tidyr XML yaml]; }; + bayNorm = derive2 { name="bayNorm"; version="0.99.19"; sha256="1vk4rlc9vchlvidhykqb75ljxhy0v9pbm2jdd5md4dswwq74psad"; depends=[BB BiocParallel doSNOW fitdistrplus foreach iterators locfit MASS Rcpp RcppArmadillo RcppProgress SingleCellExperiment SummarizedExperiment]; }; baySeq = derive2 { name="baySeq"; version="2.15.2"; sha256="01iv53gsrqm0ia44dzirdfpfqdrav46xxwml7xmb6cfgafx118qd"; depends=[abind edgeR GenomicRanges]; }; - bcSeq = derive2 { name="bcSeq"; version="1.3.0"; sha256="1l1zpf1pyf7r3qqif6f4fjzxrvcj18yz8ggads1q98z74nrzwgwq"; depends=[Biostrings Matrix Rcpp]; }; - beachmat = derive2 { name="beachmat"; version="1.3.2"; sha256="0mr1a8zcrrfs2klavq4jzw5lpcv64l3rvjpqx78jdhdvrfd0fi99"; depends=[DelayedArray HDF5Array Rcpp rhdf5 Rhdf5lib]; }; - beadarray = derive2 { name="beadarray"; version="2.31.0"; sha256="1kf6fzq11mr49xav1ivz366vpsjaqhi1l0k4751k79s6rr30m6d6"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 illuminaio IRanges limma reshape2]; }; + bcSeq = derive2 { name="bcSeq"; version="1.3.3"; sha256="14lmv9zlrh1xqdm0d0xyfi2rbjk8h3hkiaq74mbrygcgy8i9n77b"; depends=[Biostrings Matrix Rcpp]; }; + beachmat = derive2 { name="beachmat"; version="1.3.11"; sha256="06nb379rwpfb216qizxmmviljnm92vw52q9qlba8hsgrn189fbzl"; depends=[BiocGenerics DelayedArray HDF5Array Rcpp rhdf5 Rhdf5lib]; }; + beadarray = derive2 { name="beadarray"; version="2.31.1"; sha256="1vnhdw4gcv35xbj6s2rhwf4w90ghpmyjqcp5r4hnh3f829921xvf"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 illuminaio IRanges limma reshape2]; }; beadarraySNP = derive2 { name="beadarraySNP"; version="1.47.0"; sha256="1x4byqw6d2xy4db6pgbadsdwakw39lvw58dckijk2fwgrimzipn0"; depends=[Biobase quantsmooth]; }; bgafun = derive2 { name="bgafun"; version="1.43.0"; sha256="02pv0b72m7xy2hqjdhz881qkp83api8lwbjngq7v29xhp7mpmgq3"; depends=[ade4 made4 seqinr]; }; bgx = derive2 { name="bgx"; version="1.47.0"; sha256="1vh2hhjsfyx8laq1xym7zaxsakgwcp0ybha6xxdc18mwlwr3q412"; depends=[affy Biobase gcrma]; }; - bigmelon = derive2 { name="bigmelon"; version="1.7.0"; sha256="0r753dyi2ls6dy99zh519mvqqc9pr8vy16pyvmpmpvxg8bj1hx90"; depends=[Biobase BiocGenerics gdsfmt GEOquery methylumi minfi wateRmelon]; }; + bigmelon = derive2 { name="bigmelon"; version="1.7.4"; sha256="10sypnsvj561v9fdii047xvy2hamljss3rdw89b5l478flh5h3bx"; depends=[Biobase BiocGenerics gdsfmt GEOquery methylumi minfi wateRmelon]; }; bigmemoryExtras = derive2 { name="bigmemoryExtras"; version="1.29.0"; sha256="0cxbd4zdvrpqycnvgw7svvngknscc4s9ycqp3csa8v1gpc9bj9cd"; depends=[bigmemory]; }; - bioCancer = derive2 { name="bioCancer"; version="1.9.0"; sha256="131a7la949ckklcbsr9rbm99nhaz7zlbk6ck7lhc8n55z5lig30d"; depends=[AlgDesign AnnotationFuncs Biobase cgdsr clusterProfiler DiagrammeR DOSE dplyr DT geNetClassifier htmlwidgets org_Hs_eg_db plyr r_import radiant_data reactome_db ReactomePA shiny shinythemes tibble visNetwork XML]; }; + bioCancer = derive2 { name="bioCancer"; version="1.9.8"; sha256="0dzsa1v2w8x73vz41h1h7gfv6yk1csffmn453cpzvvy2sy6v7pls"; depends=[AlgDesign AnnotationFuncs Biobase cgdsr clusterProfiler DiagrammeR DOSE dplyr DT geNetClassifier htmlwidgets org_Hs_eg_db plyr r_import radiant_data reactome_db ReactomePA shiny shinythemes tibble visNetwork XML]; }; bioDist = derive2 { name="bioDist"; version="1.53.0"; sha256="04pazvkmw36ghicyzbqvb7rq3kvpw7qrj01k7gddrg4c1dc2rdd2"; depends=[Biobase KernSmooth]; }; - bioassayR = derive2 { name="bioassayR"; version="1.19.0"; sha256="1c2xjbh0lnik1dn2iwicpd0y1swbnnz1zac1vlaabhmxdw2g1h0n"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; }; - biobroom = derive2 { name="biobroom"; version="1.13.0"; sha256="1csxi4f7d0lg1j9sjnmp089pma65pq1k2yyimrh0vl8yw92zlns6"; depends=[Biobase broom dplyr tidyr]; }; + bioassayR = derive2 { name="bioassayR"; version="1.19.3"; sha256="1p7akwrsa22qrngsyksin8xxldfmlfp63yypgsqackj1qni1p4gs"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; }; + biobroom = derive2 { name="biobroom"; version="1.13.2"; sha256="02mgb1rqdn616xgs1gjfmn84z6565v41m9zg16m6waba8p348chn"; depends=[Biobase broom dplyr tidyr]; }; biocGraph = derive2 { name="biocGraph"; version="1.43.0"; sha256="1ps4r6rkffmqisfz5wip981r3dbx57n3r1j6whw9l6dbs043fjql"; depends=[BiocGenerics geneplotter graph Rgraphviz]; }; - biocViews = derive2 { name="biocViews"; version="1.49.4"; sha256="1mgf21zbq8pm3iw8fsw700wzdjca1kf575xayaibblfsxcd1y59q"; depends=[Biobase graph RBGL RCurl RUnit XML]; }; - biomaRt = derive2 { name="biomaRt"; version="2.37.3"; sha256="087vd0csab9ph21ijahjj66wpwnbsd48mvym12y7wrw71rvincw2"; depends=[AnnotationDbi httr progress RCurl stringr XML]; }; - biomformat = derive2 { name="biomformat"; version="1.9.0"; sha256="1n8dwxkd6k0nvksg6dpcq84da9y9mjsmbn62362ja2kjgzqkh80x"; depends=[jsonlite Matrix plyr rhdf5]; }; + biocViews = derive2 { name="biocViews"; version="1.49.10"; sha256="1dzd4ag0m2cprih66787aqgmm6fn68w6r7l5x6palsgix382m4m2"; depends=[Biobase graph RBGL RCurl RUnit XML]; }; + biomaRt = derive2 { name="biomaRt"; version="2.37.9"; sha256="196glcsp4cp0wfw2hrlvpxrx9r7ncfd775gfpmy298xldsxqf319"; depends=[AnnotationDbi httr progress RCurl stringr XML]; }; + biomformat = derive2 { name="biomformat"; version="1.9.1"; sha256="1kjk6agznq63a48jhj2yxkxr1nmwjlhb4zwmh1i1aawhzk1d04z1"; depends=[jsonlite Matrix plyr rhdf5]; }; biomvRCNS = derive2 { name="biomvRCNS"; version="1.21.0"; sha256="193cfwknlm28pm5n7ydmrnaczw7xisiz07l29jyk0h05jrmrvna0"; depends=[GenomicRanges Gviz IRanges mvtnorm]; }; biosigner = derive2 { name="biosigner"; version="1.9.0"; sha256="0v33vksq23byv5ybkb0mmvcb5fag3ghy9gcvb9aj16i7r0bs61ql"; depends=[Biobase e1071 randomForest ropls]; }; biosvd = derive2 { name="biosvd"; version="2.17.0"; sha256="19l7mc1pbsbbzsb635iiqb778xq1lrlnmsnyd324471c3rnb1yn7"; depends=[Biobase BiocGenerics NMF]; }; biotmle = derive2 { name="biotmle"; version="1.5.1"; sha256="0ihc1g60j1lkz3na23vvpd9c8xcz0p8wm5ksa6169zxjgqb90mmv"; depends=[BiocGenerics BiocParallel doFuture dplyr future ggplot2 ggsci limma S4Vectors SummarizedExperiment superheat tmle]; }; - biovizBase = derive2 { name="biovizBase"; version="1.29.0"; sha256="0cmfigqy4ajrsdgwiwnwkhnznk14phq2di7yijjr0n3whk2xbvp4"; depends=[AnnotationDbi AnnotationFilter BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + biovizBase = derive2 { name="biovizBase"; version="1.29.2"; sha256="0xhwnjjwv41wsn3knl3pyswdwnrmsj49nwrxpmdlmivgqz6f0kz7"; depends=[AnnotationDbi AnnotationFilter BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer rlang Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; }; birta = derive2 { name="birta"; version="1.25.0"; sha256="0c8rvf63cq6rzax2vhgk4y2xjgylnygihgv8yw7iznhpvqxxqm5g"; depends=[Biobase limma MASS]; }; birte = derive2 { name="birte"; version="1.17.0"; sha256="14xgvv12457yai92vvbpnc2fn4bnc129nrpwxl4kck09mh7kzfii"; depends=[Biobase glmnet limma MASS nem Rcpp RcppArmadillo]; }; - blima = derive2 { name="blima"; version="1.15.0"; sha256="160vdrinkq6pw851sxc9k0ybhh1ms0zd3jnxri6gdysbk2c2da2n"; depends=[beadarray Biobase BiocGenerics Rcpp]; }; + blima = derive2 { name="blima"; version="1.15.1"; sha256="06j3ibg62kxv0qvn1rmals6y6g1h8a3y1icvypjanl2r96l3h8hv"; depends=[beadarray Biobase BiocGenerics Rcpp]; }; bnbc = derive2 { name="bnbc"; version="1.3.0"; sha256="07jzc55x31zn5ak5rlpc0xpqgnkl03vhpdrd8ay12n450zggd77q"; depends=[BiocGenerics EBImage GenomeInfoDb GenomicRanges IRanges matrixStats preprocessCore Rcpp S4Vectors SummarizedExperiment sva]; }; + brainImageR = derive2 { name="brainImageR"; version="0.99.13"; sha256="0yfp5z27iawr9m1avmlk6fwyxfzh030j6a6amz50zssmxx3girld"; depends=[BiocGenerics ExperimentHub ggplot2 gridExtra randomForest RColorBrewer testthat]; }; branchpointer = derive2 { name="branchpointer"; version="1.7.0"; sha256="0ii7y3as43g7yp2qbzxv0bz66ayng8pxgk95303fp2l2akjb7gnx"; depends=[biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg38 caret cowplot data_table gbm GenomeInfoDb GenomicRanges ggplot2 IRanges kernlab plyr rtracklayer S4Vectors stringr]; }; + breakpointR = derive2 { name="breakpointR"; version="0.99.11"; sha256="1d6s3zvr0sjif63czd8z0d67ysdvjyfcqfcvcjzwcv158h59h7vj"; depends=[BiocGenerics breakpointRdata cowplot doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges Rsamtools S4Vectors]; }; bridge = derive2 { name="bridge"; version="1.45.0"; sha256="11rqvigax6j1bqj1nyf4x6ssmqi0892m1rhak1wz3xcj4adb8vwz"; depends=[rama]; }; - bsseq = derive2 { name="bsseq"; version="1.17.0"; sha256="0mx9x996lhq63la9wkmygvdk8s215j3j833vx738prncc5wkkl4v"; depends=[Biobase BiocGenerics data_table DelayedArray DelayedMatrixStats GenomeInfoDb GenomicRanges gtools HDF5Array IRanges limma locfit permute R_utils S4Vectors scales SummarizedExperiment]; }; + bsseq = derive2 { name="bsseq"; version="1.17.7"; sha256="1ch766hhahn70nsi2a0r6438q5b3b3z1a7l65ldbhr8c3w4x1wp3"; depends=[beachmat Biobase BiocGenerics BiocParallel Biostrings BSgenome data_table DelayedArray DelayedMatrixStats GenomeInfoDb GenomicRanges gtools HDF5Array IRanges limma locfit permute R_utils Rcpp Rhdf5lib S4Vectors scales SummarizedExperiment]; }; bumphunter = derive2 { name="bumphunter"; version="1.23.0"; sha256="1dn6z7q8k54vd59dqirvdy6048ywa3c4njc2vrja8f5i2lsvfwc8"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; }; + cTRAP = derive2 { name="cTRAP"; version="0.99.12"; sha256="0wg8phma29ijgfwp992l3dcqb64q7fzvamsiphrr3swn5dzs8kbv"; depends=[biomaRt cowplot data_table fgsea ggplot2 httr limma pbapply piano plyr R_utils readr rhdf5]; }; caOmicsV = derive2 { name="caOmicsV"; version="1.11.0"; sha256="0lxlk5wlfna009k2jk8kgj61ks3hfcx1lvpymidb2yjx0kk2n7sg"; depends=[bc3net igraph]; }; - canceR = derive2 { name="canceR"; version="1.15.0"; sha256="08iz3lih2rhnwd31pfq6ra6kwwgmmggrfrcqsivnp49ni19gy0sq"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase GSEAlm phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; }; + canceR = derive2 { name="canceR"; version="1.15.3"; sha256="03ib2ydmb26zc91hwy5w2sysvqay1087yjs03ki83spr4hh4hqmx"; depends=[Biobase cgdsr circlize Formula geNetClassifier GSEABase GSEAlm phenoTest plyr rpart RUnit survival tcltk2 tkrplot]; }; cancerclass = derive2 { name="cancerclass"; version="1.25.0"; sha256="059nw8y6319m8k3i4l4crbydia2xz8v3dzc1dgj0hz6v3gfkxh8v"; depends=[binom Biobase]; }; casper = derive2 { name="casper"; version="2.15.0"; sha256="129grx8bb2scjsvcqgyxigsw1n36miqbpf8val5yzm0lv9zwv24s"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; }; - categoryCompare = derive2 { name="categoryCompare"; version="1.25.0"; sha256="16zmqs8mf8lhsnlqfna40bq46v2zgqn823y98ycnx4c1m1l2jmk3"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCy3]; }; - cbaf = derive2 { name="cbaf"; version="1.3.0"; sha256="19zy92jk8g5dzh5r2hpdc96yjgh0plqzn189giww65sq6hgiqvl2"; depends=[BiocFileCache cgdsr genefilter gplots RColorBrewer xlsx]; }; - ccfindR = derive2 { name="ccfindR"; version="1.1.1"; sha256="1xp960q6jcskganvygxkpr9may680s30p57fjm5x625z4vwvd8r8"; depends=[ape BiocGenerics gtools Matrix RColorBrewer Rtsne S4Vectors SingleCellExperiment SummarizedExperiment]; }; + categoryCompare = derive2 { name="categoryCompare"; version="1.25.1"; sha256="1qxfkqzyq6q4imhi517bbxn785i0qzwcy4ac68k1iw0c8frcn1hg"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCy3]; }; + cbaf = derive2 { name="cbaf"; version="1.3.5"; sha256="08gr3axl77gyall3hd97gf5npqz588p24aafqf4p31djqxmv64wn"; depends=[BiocFileCache cgdsr genefilter gplots RColorBrewer xlsx]; }; + ccfindR = derive2 { name="ccfindR"; version="1.1.23"; sha256="14gl5jmjp23q0kh9wrv5ds5l0qly9x07h4ny1ivm3sqqlbs8ya9h"; depends=[ape gtools irlba Matrix RColorBrewer Rcpp RcppEigen Rmpi Rtsne S4Vectors SingleCellExperiment SummarizedExperiment]; }; + ccmap = derive2 { name="ccmap"; version="1.7.2"; sha256="1f0b24c0is8nxkfxxjnbdbmqv4p9ifcsdw49skkwnsc5n9k6w54c"; depends=[AnnotationDbi BiocManager ccdata data_table doParallel foreach lsa xgboost]; }; ccrepe = derive2 { name="ccrepe"; version="1.17.0"; sha256="1k464wrgigq0yyr2w7pw8qwkql49jnl58ayr26785ajdn79lfcq4"; depends=[infotheo]; }; + celaref = derive2 { name="celaref"; version="0.99.3"; sha256="1nmdqadrj5hgqijjywk8754ajj4i59bmrpah9xdginpiakdbskra"; depends=[BiocGenerics dplyr ggplot2 magrittr MAST Matrix readr rlang S4Vectors SummarizedExperiment tibble]; }; cellGrowth = derive2 { name="cellGrowth"; version="1.25.0"; sha256="12flwz3pzjhwqxsljy5g2ylgxiygln24z5zydc62xrkjcg3wqgn0"; depends=[lattice locfit]; }; - cellHTS2 = derive2 { name="cellHTS2"; version="2.45.0"; sha256="1dbjsxhfifjpmyn3w3zhmhaf3s2arrpl6lipg31sp9w9xfiij1xs"; depends=[Biobase BiocGenerics Category genefilter GSEABase hwriter locfit prada RColorBrewer splots vsn]; }; - cellTree = derive2 { name="cellTree"; version="1.11.0"; sha256="1rkrj316fm2xx1x7wjk9qv2kdr4vxhbixfw7y2r1p6kvxl1xwdi0"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; }; + cellHTS2 = derive2 { name="cellHTS2"; version="2.45.1"; sha256="0ccl152v44380666xhqj5s1vwd9xqih3a7ysdjb5n8mwpq1kq0av"; depends=[Biobase BiocGenerics Category genefilter GSEABase hwriter locfit prada RColorBrewer splots vsn]; }; + cellTree = derive2 { name="cellTree"; version="1.11.1"; sha256="026f59jj07j5jbv0j3048c44sz2zr50lzwy07m0i6yvl0w1pc57h"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; }; cellbaseR = derive2 { name="cellbaseR"; version="1.5.0"; sha256="0067s59gq395ha4kjmdvqx3bdjgkgczwvchwjswr23hm6ffbgss3"; depends=[BiocParallel data_table doParallel foreach httr jsonlite pbapply R_utils Rsamtools tidyr]; }; - cellity = derive2 { name="cellity"; version="1.9.0"; sha256="0rdknpw38cwf4vvq30g573irv4l51gyx9yaff8rkrd0b38bpywa8"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; }; - cellscape = derive2 { name="cellscape"; version="1.5.0"; sha256="0was4lsw2rpg98kzdzpd6wv84jzfh7ncgnvsyc2ijbjanf52ycxd"; depends=[dplyr gtools htmlwidgets jsonlite plyr reshape2 stringr]; }; + cellity = derive2 { name="cellity"; version="1.9.2"; sha256="0hc8whsqq066drwbk3aiz8pdy7zd3qx7fmsa5knw0xk1dpbpglcg"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; }; + cellscape = derive2 { name="cellscape"; version="1.5.1"; sha256="1fi9qxnhrh9n9br1gjpss8acpfd2fm22nd9ih2flng0hgy4aymyc"; depends=[dplyr gtools htmlwidgets jsonlite plyr reshape2 stringr]; }; cghMCR = derive2 { name="cghMCR"; version="1.39.0"; sha256="119nk170b8a8lr1hi2nmj2bgaydkxf11732bqxhpm13hn9cyvnpr"; depends=[BiocGenerics CNTools DNAcopy limma]; }; charm = derive2 { name="charm"; version="2.27.0"; sha256="0cgrh027qjy34nb0xd0fl7fxifpgb1i9qcy3g7w7vv0sgj5g2gxc"; depends=[Biobase Biostrings BSgenome ff fields genefilter gtools IRanges limma nor1mix oligo oligoClasses preprocessCore RColorBrewer siggenes SQN sva]; }; chimera = derive2 { name="chimera"; version="1.23.0"; sha256="16l1y016wdmdqm4psnl3rxs4gw1d8b0hvfr29x9sv7153fpvqxhf"; depends=[AnnotationDbi Biobase BSgenome_Hsapiens_UCSC_hg19 GenomicAlignments GenomicRanges Homo_sapiens Rsamtools TxDb_Hsapiens_UCSC_hg19_knownGene]; }; - chimeraviz = derive2 { name="chimeraviz"; version="1.7.0"; sha256="12xkgvmqfdwfzrxw6f3iqkbknqw3238ks5903jk314wc1sz1pxxc"; depends=[AnnotationDbi AnnotationFilter ArgumentCheck BiocStyle Biostrings dplyr DT ensembldb GenomeInfoDb GenomicAlignments GenomicRanges graph Gviz IRanges org_Hs_eg_db org_Mm_eg_db plyr RCircos RColorBrewer readr Rgraphviz rmarkdown Rsamtools S4Vectors]; }; + chimeraviz = derive2 { name="chimeraviz"; version="1.7.5"; sha256="0k0yn24v3lgkzwbx1597n5k81igjmvmz232mwfsazd3znwdbwm7b"; depends=[AnnotationDbi AnnotationFilter ArgumentCheck BiocStyle Biostrings data_table dplyr DT ensembldb GenomeInfoDb GenomicAlignments GenomicRanges graph Gviz IRanges org_Hs_eg_db org_Mm_eg_db plyr RCircos RColorBrewer Rgraphviz rmarkdown Rsamtools S4Vectors]; }; chipenrich = derive2 { name="chipenrich"; version="2.5.0"; sha256="1ssvmnnlf6s37hbj0cdpcjyfz3qj7mv1nfxbdsb3cbq541lxidlv"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; }; chipseq = derive2 { name="chipseq"; version="1.31.0"; sha256="0pfi2jyi3cb73c6k0300k1yvk2nvzh6lc19qmgs9qxqm0zjh5vly"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; }; chopsticks = derive2 { name="chopsticks"; version="1.47.0"; sha256="0lvd5fpvlkwzplm6wpxrmi6gl35vg9li8zs8kiyf65yggp8azkd7"; depends=[survival]; }; - chroGPS = derive2 { name="chroGPS"; version="1.99.1"; sha256="18i133z22d7pmd4xkkm2ciqpawvp7lh7sx4qkcysixxi9cdj7iix"; depends=[Biobase changepoint cluster DPpackage ellipse GenomicRanges ICSNP IRanges MASS vegan]; }; + chroGPS = derive2 { name="chroGPS"; version="1.99.4"; sha256="10grx4zwj2w2wcf4bf09m97fi4nn31q99jrlnmpm5zfwfyh9y1nk"; depends=[Biobase changepoint cluster DPpackage ellipse GenomicRanges ICSNP IRanges MASS vegan]; }; chromDraw = derive2 { name="chromDraw"; version="2.11.0"; sha256="17lb88jp4997nmdb7g3rmi509vn552rda603diq5qxjd8hxszhj7"; depends=[GenomicRanges Rcpp]; }; chromPlot = derive2 { name="chromPlot"; version="1.9.0"; sha256="0g7vnv12m9db563p99kcdv9mjb5h2saxmvq810ckw3vd9hxla4sm"; depends=[biomaRt GenomicRanges]; }; - chromVAR = derive2 { name="chromVAR"; version="1.3.0"; sha256="1vx8ai2x3mmrlpqz4kww19q6drwhs51ndfhqvcm20hnjvw4q86fb"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; }; - chromstaR = derive2 { name="chromstaR"; version="1.7.1"; sha256="0jhli9jzxi35j8ar94wjjqbg3d3ankbizx2ck5kfpsr4kz6cf91j"; depends=[bamsignals chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; }; - chromswitch = derive2 { name="chromswitch"; version="1.3.1"; sha256="1qylaxmyrh16gxh8l5isngs4ixk3v758f41r3nc15r1gbncdv7nx"; depends=[Biobase BiocParallel cluster dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats NMF rtracklayer S4Vectors tidyr]; }; - cisPath = derive2 { name="cisPath"; version="1.21.0"; sha256="0bgc9jm3lkpij938yd1jni7yd4jbahqgr6s9zlzrly24f3pks24a"; depends=[]; }; - cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.19.0"; sha256="0d7xk559jg3bik9gwzi3lh51jspmq3ain706d2cm4dq96wms03a5"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomicRanges seqinr]; }; + chromVAR = derive2 { name="chromVAR"; version="1.3.2"; sha256="0wg1ajyff9ly82q0468cy33iysj59dfidp2qqgkp85vik0aci1sx"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; }; + chromstaR = derive2 { name="chromstaR"; version="1.7.3"; sha256="0nbfzh7ks9816yllyd125nd4qm7fk5i4x36jd7wd81hp0cpb7ia5"; depends=[bamsignals chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; }; + chromswitch = derive2 { name="chromswitch"; version="1.3.2"; sha256="1ls6007vz2b0ij543vgdpxv5dqbjaklv9ps81c3z6n91qf9ld2an"; depends=[Biobase BiocParallel cluster dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats NMF rtracklayer S4Vectors tidyr]; }; + cicero = derive2 { name="cicero"; version="0.99.57"; sha256="1gj0ckn4b3ifkvvb8lbwl83fdnmcayk3wmd83piq95j8nkaba0c8"; depends=[assertthat Biobase BiocGenerics data_table dplyr FNN GenomicRanges ggplot2 glasso Gviz igraph IRanges Matrix monocle plyr reshape2 S4Vectors stringr tibble VGAM]; }; + cisPath = derive2 { name="cisPath"; version="1.21.1"; sha256="06s9ch9av414vqi8l6rsz8y49bklygv9m7wrvv8nmx14h6fvpbmq"; depends=[]; }; + cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.19.1"; sha256="12izlkfqx1cshb48qzn987hhanqxjfhaiiwl6lrn0xpqbw384k3y"; depends=[BiocGenerics BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomicRanges seqinr]; }; cleaver = derive2 { name="cleaver"; version="1.19.0"; sha256="19jrmz8bjj9yg52j002zyf6v1as2k7m0g0msvmgvlsf0nvgk5h72"; depends=[Biostrings IRanges S4Vectors]; }; clippda = derive2 { name="clippda"; version="1.31.0"; sha256="18jsfx4y09mzsah8w2pqwarl7h1kn76cm6sjh6r3dqikbzq24rak"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; }; clipper = derive2 { name="clipper"; version="1.21.1"; sha256="19gkqz94sxamw8gx1rib17j7sxivzflrhypkp4bsyqshkydyzgcq"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; }; @@ -891,102 +957,109 @@ in with self; { clst = derive2 { name="clst"; version="1.29.0"; sha256="0bz0hd7zjr9a225hg1jl0r86zvdz4i9i63grg0nm0dvs32pbaf2g"; depends=[lattice ROC]; }; clstutils = derive2 { name="clstutils"; version="1.29.0"; sha256="0fsqlx06qd7bqdnk746pcn1w29xbpcpjazsnvk1dibxyxqkbqvjh"; depends=[ape clst lattice rjson RSQLite]; }; clustComp = derive2 { name="clustComp"; version="1.9.0"; sha256="1lmg17d3n97kp5z21wl2kyx140kmqlfwsm4q6qcq7j9zyfq2jrdc"; depends=[sm]; }; - clusterExperiment = derive2 { name="clusterExperiment"; version="2.1.5"; sha256="0fwbvm25ymmazw4i1l1v5bd0yrihzgiqmkycfxk5ismf9nbyny13"; depends=[ape BiocGenerics cluster DelayedArray dendextend edgeR HDF5Array howmany kernlab limma locfdr matrixStats NMF phylobase RColorBrewer Rcpp RSpectra S4Vectors scales SingleCellExperiment stringr SummarizedExperiment zinbwave]; }; - clusterProfiler = derive2 { name="clusterProfiler"; version="3.9.1"; sha256="0bz6n4y10f2kgkxmsr2rf8clqfsg2drgavx0xp36jv66bp511l4d"; depends=[AnnotationDbi DOSE enrichplot ggplot2 GO_db GOSemSim magrittr plyr qvalue rvcheck tidyr]; }; - clusterSeq = derive2 { name="clusterSeq"; version="1.5.0"; sha256="1naw9hprdgb2wxqcvjvzgmjhnl0cncixar7gzs7d63dyf9d3khzs"; depends=[baySeq BiocGenerics BiocParallel]; }; + clusterExperiment = derive2 { name="clusterExperiment"; version="2.1.6"; sha256="0wgi8qil7vyqlqsbqm0fbk9337wvcz53xid8qy4qc5l9pipf7s4r"; depends=[ape BiocGenerics cluster DelayedArray dendextend edgeR HDF5Array howmany kernlab limma locfdr matrixStats NMF phylobase RColorBrewer Rcpp RSpectra S4Vectors scales SingleCellExperiment stringr SummarizedExperiment zinbwave]; }; + clusterProfiler = derive2 { name="clusterProfiler"; version="3.9.2"; sha256="1y9kss22c64yk3abbcz12ph2q38xp6x38cvffnr3wcm71pa26aj2"; depends=[AnnotationDbi DOSE enrichplot ggplot2 GO_db GOSemSim magrittr plyr qvalue rvcheck tidyr]; }; + clusterSeq = derive2 { name="clusterSeq"; version="1.5.1"; sha256="0y8a5ik310pvhbrpaf77dpdlhgsggv8b4ziw9270lw552wq6m2s2"; depends=[baySeq BiocGenerics BiocParallel]; }; clusterStab = derive2 { name="clusterStab"; version="1.53.0"; sha256="1fz5l64c7sfzxvqrfxbwvla6k72dq32r9v9nsc4cycpmyyfvgqfg"; depends=[Biobase]; }; - cn_farms = derive2 { name="cn.farms"; version="1.29.0"; sha256="03nq4xyq4q4x9ajlz24pda4jy2vqnxrr2jyrfy54d54qqkn6hj18"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; }; + cn_farms = derive2 { name="cn.farms"; version="1.29.1"; sha256="0dysp6kvdgxbzjhm9sd0h9l2ckl7kvlg910bxzz192p9nlwpgc25"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; }; cn_mops = derive2 { name="cn.mops"; version="1.27.0"; sha256="1fzsp4amldbfg2msll3synvwlwdsda1fajwsl5qxg83pcy0v8rm2"; depends=[Biobase BiocGenerics exomeCopy GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; cnvGSA = derive2 { name="cnvGSA"; version="1.25.0"; sha256="0ha9nh485r7x67q25cj6r7m8lckw9bm1kvd1rvkrwn6nnlld8bn1"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; }; coGPS = derive2 { name="coGPS"; version="1.25.0"; sha256="081ljzlc0vq19h7w31ccqxbdhi2rivi8qrrvnxw6imj0pfckn1hn"; depends=[]; }; - coMET = derive2 { name="coMET"; version="1.13.0"; sha256="1vyzwrdf10n9ribfcacfxmsfkr6pm9g4gi90n2c5lhhn4983m1wk"; depends=[biomaRt colortools corrplot GenomicRanges gridExtra Gviz hash IRanges psych rtracklayer S4Vectors]; }; - cobindR = derive2 { name="cobindR"; version="1.19.0"; sha256="1hb6mwd6xqxgzdglz496cn39hmjnxs87qc0c633r6a2bhq8dpcca"; depends=[BiocGenerics biomaRt Biostrings BSgenome gmp gplots IRanges mclust rtfbs seqinr yaml]; }; + coMET = derive2 { name="coMET"; version="1.13.4"; sha256="0fzgwy11jcscp207giwdwpkq5zad72sdhcd4d5qrprda8565kx33"; depends=[biomaRt colortools corrplot GenomicRanges gridExtra Gviz hash IRanges psych rtracklayer S4Vectors]; }; + coRdon = derive2 { name="coRdon"; version="0.99.11"; sha256="1fa2zzqrnj5ggk3czvdqkn1ixha1a991xjv27plw9hvy8snvyjzc"; depends=[Biobase Biostrings data_table dplyr ggplot2 purrr]; }; + cobindR = derive2 { name="cobindR"; version="1.19.1"; sha256="1n4yr8izd1fhn6qzcifamhvd1shah0hv06v1a097xjnghnr46r8q"; depends=[BiocGenerics biomaRt Biostrings BSgenome gmp gplots IRanges mclust rtfbs seqinr yaml]; }; codelink = derive2 { name="codelink"; version="1.49.0"; sha256="0fqxdmzwx6vhclsamc4i0kshdnqpjpqgzrmjm2lwvjai2bnbiaz4"; depends=[annotate Biobase BiocGenerics limma]; }; coexnet = derive2 { name="coexnet"; version="1.3.0"; sha256="0kqzvi5zs1nvcnbvgrq06fzzcfdsga5fz0r70drcsx449nkqrj5c"; depends=[acde affy Biobase GEOquery igraph limma minet rmarkdown siggenes STRINGdb SummarizedExperiment vsn]; }; - cogena = derive2 { name="cogena"; version="1.15.0"; sha256="05hdmx7awxsrbblm0sfgszhi10wggpx2141ariy01gvha8kmm8l8"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2]; }; - compcodeR = derive2 { name="compcodeR"; version="1.17.0"; sha256="0b591axva9x93pq7cbcg9z86n6rdnaw29q18q7cwvd44j5l8b6ah"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; }; - condcomp = derive2 { name="condcomp"; version="0.99.1"; sha256="0493d56hqn1vrd85j7174y9i2f7whqy68nn5645fr57a0wl4bn4i"; depends=[cluster ggplot2 ggrepel outliers]; }; + cogena = derive2 { name="cogena"; version="1.15.1"; sha256="0ch85p3abar0cahb3f8hrd28ylwbd1m7z7s28gh4wrrxx9cfqjmx"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2]; }; + compEpiTools = derive2 { name="compEpiTools"; version="1.15.3"; sha256="06m6kd2c6cadnsl8lq3dna1kxyc7sgr14g9qbjr3qf40kc2njmka"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; }; + compcodeR = derive2 { name="compcodeR"; version="1.17.2"; sha256="0p8mv2pw8hrv23yswqavagii5ascppmgm89zq7589xnc20bl70yh"; depends=[caTools edgeR gdata ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS modeest ROCR sm stringr vioplot]; }; + condcomp = derive2 { name="condcomp"; version="0.99.2"; sha256="1wckrk43h6ab30caqvffrxlssib2iigagqlpbifwf6l2856c642i"; depends=[cluster ggplot2 ggrepel outliers]; }; + consensus = derive2 { name="consensus"; version="0.99.17"; sha256="0ipdx2qazvh2aliz1k48cq6k21vn40wql1h67qgcnb5s8s10k24a"; depends=[gplots matrixStats RColorBrewer]; }; + consensusDE = derive2 { name="consensusDE"; version="0.99.10"; sha256="1zx233m9d65xvsjwgm1m54sqqvp3fjjcxi0yj1j7by3a96yhy7my"; depends=[airway AnnotationDbi Biobase BiocParallel Biostrings dendextend DESeq2 EDASeq edgeR GenomicAlignments GenomicFeatures limma pcaMethods RColorBrewer Rsamtools RUVSeq S4Vectors SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm3_ensGene]; }; consensusOV = derive2 { name="consensusOV"; version="1.3.0"; sha256="0jk776svh4krp1cj77sy9lrp3rx6ka8vbc4xz1armf9vd9sn0ln8"; depends=[Biobase gdata genefu GSVA limma matrixStats randomForest]; }; consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.9.0"; sha256="0hdfnvvd06s2pbrsbrcp6nky7clvj2xqdf3d6x728mxfv17yflrl"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; }; - contiBAIT = derive2 { name="contiBAIT"; version="1.9.0"; sha256="1fgff5pr9ggqpl85yh410lspq0mbq9r264rsw716hqjy2rm6g8bd"; depends=[BH BiocParallel clue cluster colorspace data_table diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; }; + contiBAIT = derive2 { name="contiBAIT"; version="1.9.1"; sha256="0nli8r7wn20f92wax39gk8nawbiy8xjdxfv7r8267n9cmfdywxhm"; depends=[BH BiocParallel clue cluster colorspace data_table diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; }; conumee = derive2 { name="conumee"; version="1.15.0"; sha256="1xpq77j6zwqj3s8qxjvnzvrwk27g6cipqp8k8g1x61ayalw5mwn9"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; }; convert = derive2 { name="convert"; version="1.57.0"; sha256="1bfwmxcvg3dxygzbl290l645ri610fxymvba349hj785w9v09hgi"; depends=[Biobase limma marray]; }; copa = derive2 { name="copa"; version="1.49.0"; sha256="08myzip07f28iyyf1v28y60pwmyabv7yhbd1y9avmmfa8swh4zav"; depends=[Biobase]; }; copynumber = derive2 { name="copynumber"; version="1.21.0"; sha256="1qcrq5ls1rj5had0v2abcya5bbm1mpni97lxvlm75yxpalkrbmg1"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; }; - coseq = derive2 { name="coseq"; version="1.5.1"; sha256="0b5680pzwalgl8dfdclc03cp9742ap65d16h86h150h72h55cvh1"; depends=[BiocParallel capushe compositions corrplot DESeq2 e1071 edgeR ggplot2 gridExtra HTSCluster HTSFilter mvtnorm Rmixmod S4Vectors scales SummarizedExperiment]; }; + coseq = derive2 { name="coseq"; version="1.5.2"; sha256="1hx8brqi422k5q9isbdfrp1799c161yjkfad2hq9zw3rkjj3hbyf"; depends=[BiocParallel capushe compositions corrplot DESeq2 e1071 edgeR ggplot2 HTSCluster HTSFilter mvtnorm Rmixmod S4Vectors scales SummarizedExperiment]; }; cosmiq = derive2 { name="cosmiq"; version="1.15.2"; sha256="1n91gp3v27924pavlm4kkidihzhdgj5p679x5krxkqf430f3kbk4"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; }; + countsimQC = derive2 { name="countsimQC"; version="0.99.4"; sha256="0fnjl8pan117fcaxvpbcplrlqcd3sx2pq7ddcwy4qvhphbksk148"; depends=[caTools DESeq2 dplyr DT edgeR genefilter GenomeInfoDbData ggplot2 randtests rmarkdown SummarizedExperiment tidyr]; }; covEB = derive2 { name="covEB"; version="1.7.0"; sha256="01qy9713bixj1nbdhafyappbm0m6q6k769akzysvcb4cs74isq3x"; depends=[Biobase gsl igraph LaplacesDemon Matrix mvtnorm]; }; - covRNA = derive2 { name="covRNA"; version="1.7.0"; sha256="06rx0g294hndxkb2rgjghn7jbw0vn63wy54705s57wmi0cacq8dd"; depends=[ade4 Biobase genefilter]; }; + covRNA = derive2 { name="covRNA"; version="1.7.1"; sha256="09915p41xmb4gxl9nhpy8qrlpf4z1dlc9g3yi1j73a49kvgamlaa"; depends=[ade4 Biobase genefilter]; }; cpvSNP = derive2 { name="cpvSNP"; version="1.13.0"; sha256="0wv304nisngcbc8as6anlb7i090wl078rs0pclix975akj9s4zpw"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; }; cqn = derive2 { name="cqn"; version="1.27.0"; sha256="1680ww5rr4y1jqhb267hbgk77ha87awbjrl3id5cz7d7ps75a7fb"; depends=[mclust nor1mix preprocessCore quantreg]; }; - crisprseekplus = derive2 { name="crisprseekplus"; version="1.7.0"; sha256="01s08znfbd4am3lxm42664jx5qkjm383w50k36f2linrsg8j2rdc"; depends=[AnnotationDbi BiocInstaller BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; }; - crlmm = derive2 { name="crlmm"; version="1.39.0"; sha256="1piwi4w7shmszq2kbcw400jp0iqjhjv6q7kd7zpa4yqnh35dxa8q"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen SNPchip VGAM]; }; - csaw = derive2 { name="csaw"; version="1.15.7"; sha256="18wy6q7qb4zif2sjgr0fygq6y3yj706iijib6dw2ywb4xsb7gqy8"; depends=[AnnotationDbi BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicFeatures GenomicRanges IRanges limma Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; + crisprseekplus = derive2 { name="crisprseekplus"; version="1.7.3"; sha256="07fcgm24mfxxa7nv68kdd5pawkq46n2p9i3k2pmpfa07irywizf6"; depends=[AnnotationDbi BiocManager BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; }; + crlmm = derive2 { name="crlmm"; version="1.39.1"; sha256="1mb7zpqb9qfpjg8samrdd5pxgj64ganm7mkh2y7aa3vlhj450rmx"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen SNPchip VGAM]; }; + crossmeta = derive2 { name="crossmeta"; version="1.7.1"; sha256="0n5g234ghcan9jx1cavpzngypjjcrg7lz621czfg8d0rfj8wavs9"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocManager ccmap data_table doParallel doRNG DT fdrtool foreach GEOquery ggplot2 limma matrixStats metaMA metap miniUI oligo pander plotly RColorBrewer rdrop2 reshape shiny stringr sva]; }; + csaw = derive2 { name="csaw"; version="1.15.9"; sha256="0p5clsxqfy8ihsh8lxvhl8ally5gi1k6v7cclvp8kvvwj5mvcg6p"; depends=[AnnotationDbi BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicFeatures GenomicRanges IRanges limma Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; ctc = derive2 { name="ctc"; version="1.55.0"; sha256="0zkzdv3yrrr671bvr0j7xi1c358r7k09f96x5sciljg95gwpq6fm"; depends=[amap]; }; - ctsGE = derive2 { name="ctsGE"; version="1.7.1"; sha256="1m8fm0339d17hfprwgpck31dqmm9cf1ajk60rii32sphv8x1h0r8"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; }; + ctsGE = derive2 { name="ctsGE"; version="1.7.2"; sha256="1qykz2w7c0v7zs9ga0crvdydi57sqbfkg0i14rfr9mrh2cn874la"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; }; cummeRbund = derive2 { name="cummeRbund"; version="2.23.0"; sha256="12npw9nr02fs1lyj1fism4zbw1vbd47rxyyc21z8kx9ra5c76df9"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; }; + customProDB = derive2 { name="customProDB"; version="1.21.5"; sha256="01fkp1bhk21flb3ik38i533zxdzv2g1qfp9bp0b91r29z5rp8nz9"; depends=[AhoCorasickTrie AnnotationDbi biomaRt Biostrings DBI GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; }; cycle = derive2 { name="cycle"; version="1.35.0"; sha256="0wij6y9alg55kric7bs8syrw8ypd5w0iayh057qcl9qqr5lp1vq7"; depends=[Biobase Mfuzz]; }; - cydar = derive2 { name="cydar"; version="1.5.0"; sha256="1qch98a8p1wmyaccz7zg1vsamikr8rmrqki9w5ahkdn5f05z7fs4"; depends=[Biobase BiocParallel flowCore Rcpp S4Vectors shiny SummarizedExperiment viridis]; }; + cydar = derive2 { name="cydar"; version="1.5.9"; sha256="0c7k6c02yqs5nr8pirvcgdmjgqhg7ynml1sf4fsjj6m0jbqrp29p"; depends=[Biobase BiocGenerics BiocNeighbors BiocParallel flowCore Rcpp S4Vectors shiny SingleCellExperiment SummarizedExperiment viridis]; }; cytofkit = derive2 { name="cytofkit"; version="1.13.0"; sha256="0dl0y609w2y3wpncw4mxhflrnq1ymdmzp8qwnrlc13ykkrcwh40w"; depends=[Biobase colourpicker destiny doParallel e1071 flowCore FlowSOM ggplot2 ggrepel gplots igraph pdist plyr RANN Rcpp reshape2 Rtsne shiny shinyFiles vegan VGAM]; }; - cytolib = derive2 { name="cytolib"; version="1.3.0"; sha256="0zyfs7j7jijrrg7v8zf77nlad63x8id2f9bpcid4pn61qlqxqhgf"; depends=[BH RProtoBufLib]; }; + cytolib = derive2 { name="cytolib"; version="1.3.2"; sha256="10c9f7fqa5qbcxbs985ad3lljbmgfnwgcgfkp95yhahr97jb7w3s"; depends=[BH RProtoBufLib]; }; dSimer = derive2 { name="dSimer"; version="1.7.0"; sha256="0ra9y6df21s97pa8810dzbcwjhbh9br86mlqkgvvrq5rxwj97a35"; depends=[AnnotationDbi ggplot2 GO_db igraph org_Hs_eg_db Rcpp reshape2]; }; daMA = derive2 { name="daMA"; version="1.53.0"; sha256="1ahmx5c58az3s3jybz3gx7g853n0qy7b84rm7gq157yi4iil01wf"; depends=[MASS]; }; - dada2 = derive2 { name="dada2"; version="1.9.0"; sha256="1w8lq1ikzfa2dzmx0bk1p3v88af9ddhv8fqqkvh2pr1n71r09nrc"; depends=[BiocGenerics Biostrings data_table ggplot2 IRanges Rcpp RcppParallel reshape2 ShortRead XVector]; }; - dagLogo = derive2 { name="dagLogo"; version="1.19.0"; sha256="0bp4cclcwc6asnk5s9fzzcq17lv5fz93j0smsszq3csl99qpiwmi"; depends=[biomaRt Biostrings grImport motifStack pheatmap]; }; + dada2 = derive2 { name="dada2"; version="1.9.3"; sha256="1qqw51pvgvwznx3v81xbn9qakxd6s9yl8f2pxbzr0ampgm22s9yn"; depends=[BiocGenerics Biostrings data_table ggplot2 IRanges Rcpp RcppParallel reshape2 ShortRead XVector]; }; + dagLogo = derive2 { name="dagLogo"; version="1.19.1"; sha256="1y966jzzy7357gr2vdq0qgkwvbdq8pls51vfmmwka9c2zqnsdxdm"; depends=[biomaRt Biostrings grImport motifStack pheatmap]; }; dcGSA = derive2 { name="dcGSA"; version="1.9.0"; sha256="0d85qpq1v9sky5x8nv5w0hfry9w833kkljq5laa2x3n10czp1hb3"; depends=[BiocParallel Matrix]; }; - ddCt = derive2 { name="ddCt"; version="1.37.0"; sha256="11nh9xzx3iyvbb1k40581ym17a0l2brcqmscx9riyh8bzh7jh1h0"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; }; - ddPCRclust = derive2 { name="ddPCRclust"; version="1.1.1"; sha256="0lykdnbhl19nx00yxp09a2nvi10yq13dpqy30ixvbcjl04562j2q"; depends=[clue flowCore flowDensity flowPeaks ggplot2 openxlsx plotrix R_utils SamSPECTRAL]; }; - debrowser = derive2 { name="debrowser"; version="1.9.0"; sha256="099gdj0vxihwyb35pfk3hhfay7zyz3nirzlzccnjknrybfdyd7i3"; depends=[annotate AnnotationDbi baySeq clusterProfiler d3heatmap DESeq2 DOSE DT edgeR enrichplot GenomicRanges ggplot2 ggvis googleAuthR gplots igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db pathview RColorBrewer RCurl reshape2 S4Vectors shiny shinyBS shinydashboard shinyjs stringi SummarizedExperiment sva V8]; }; - decontam = derive2 { name="decontam"; version="1.1.0"; sha256="1chys2j507y4pqcca2vsf905qz7g7vw71f3rapxq39mhzp4bcjda"; depends=[ggplot2 reshape2]; }; - deepSNV = derive2 { name="deepSNV"; version="1.27.2"; sha256="0rm1wvw8qq20d4dcqijbsizhnyyrdvl6wwb6gfvafq5rzfdi01xc"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; }; - deltaGseg = derive2 { name="deltaGseg"; version="1.21.0"; sha256="1378dj1gghsphwwbhbfixbnf49lfjxy0dn297b5lsjh2h40znc2z"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; }; - derfinder = derive2 { name="derfinder"; version="1.15.0"; sha256="199nk5kjza1cy9rclgff6qq2pkzw5lfg69y9s60hbyd0hacxsqxx"; depends=[AnnotationDbi BiocGenerics BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; }; - derfinderHelper = derive2 { name="derfinderHelper"; version="1.15.0"; sha256="1v32nrznh4nm67fsjqcqbj3ifb8hiddqfcmg8nlwmgiwq78fxksi"; depends=[IRanges Matrix S4Vectors]; }; - derfinderPlot = derive2 { name="derfinderPlot"; version="1.15.0"; sha256="1zabxardj0gw8b4bscpkdxbddcd5ygxpgv0da6c7i04jp5qb80sg"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer RefManageR reshape2 S4Vectors scales]; }; + ddCt = derive2 { name="ddCt"; version="1.37.1"; sha256="1bysg67mqyrx6fqxsfbxbn4fw3brpyw0nyrvxkgbh6kwwwaccwaw"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; }; + ddPCRclust = derive2 { name="ddPCRclust"; version="1.1.2"; sha256="0d09vdwrv9kifgld4g3342xrcfi85y46nnl1pq4yv1n8dx14k3ms"; depends=[clue flowCore flowDensity flowPeaks ggplot2 openxlsx plotrix R_utils SamSPECTRAL]; }; + debrowser = derive2 { name="debrowser"; version="1.9.21"; sha256="0a4nzgw4066a9ryanvdjrbscbns6a74js3c0gadw7q19b824gv6i"; depends=[annotate AnnotationDbi baySeq clusterProfiler colourpicker d3heatmap DESeq2 DOSE DT edgeR enrichplot GenomicRanges ggplot2 googleAuthR gplots Harman heatmaply igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db pathview plotly RColorBrewer RCurl reshape2 S4Vectors shiny shinyBS shinydashboard shinyjs stringi SummarizedExperiment sva V8]; }; + decontam = derive2 { name="decontam"; version="1.1.2"; sha256="0p3kdcwl0gph9mdffd7jmycpcj1kbk8rgcwhp0idkm2xbfnra4n2"; depends=[ggplot2 reshape2]; }; + deepSNV = derive2 { name="deepSNV"; version="1.27.3"; sha256="02wn7y8dbikllpmgbq5fksxvbw6dnz3hkl1lvjd9ff6avsrpyzjs"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; }; + deltaGseg = derive2 { name="deltaGseg"; version="1.21.1"; sha256="1mrm1j816j8b9myzy8az16sg8v1g5ynxv1j2dpwbqg003pm9b2zn"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; }; + derfinder = derive2 { name="derfinder"; version="1.15.4"; sha256="1qyblw4iy33r37k9zfsbf6rbgx8fnz89wv99dy3xibiw07hahgf1"; depends=[AnnotationDbi BiocGenerics BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; }; + derfinderHelper = derive2 { name="derfinderHelper"; version="1.15.2"; sha256="1xgzx1q2fzglnrn3xyqmhbzf9rl56wbfdc4n0fy0lfrg13rb5kq1"; depends=[IRanges Matrix S4Vectors]; }; + derfinderPlot = derive2 { name="derfinderPlot"; version="1.15.2"; sha256="0vp6x6dd8ykvgaic82crykhddykiz9y3ji7nmg2j66cklsvp018s"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer RefManageR reshape2 S4Vectors scales]; }; destiny = derive2 { name="destiny"; version="2.11.3"; sha256="0z9z0frhif84rshnpffizjjv2ckr1mp7vqlk9r3fyyxzz1pkrl29"; depends=[Biobase BiocGenerics ggplot2 ggthemes igraph Matrix proxy Rcpp RcppEigen scales scatterplot3d smoother SummarizedExperiment VIM]; }; - dexus = derive2 { name="dexus"; version="1.21.0"; sha256="0p7ihli3la0x42v042azwxnjhwn6h8vlnfs8rrbg5wbpz1i3nsy9"; depends=[BiocGenerics]; }; + dexus = derive2 { name="dexus"; version="1.21.1"; sha256="00yld22dj4i9ci2jniqycxcli0xg0k06n02cg3i0lj03g4ml202h"; depends=[BiocGenerics]; }; diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.63.0"; sha256="19g9azy3s359k84rg677l0yndq13h48fs0rmddrs4z8z8w4k2n9h"; depends=[minpack_lm]; }; - diffHic = derive2 { name="diffHic"; version="1.13.3"; sha256="0ka8kma6imv3i2j1y2p83aandrmpvj6w1wqj5dsanx4mh6f316vk"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit Rcpp rhdf5 Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; }; - diffcoexp = derive2 { name="diffcoexp"; version="1.1.0"; sha256="1dmf32f2mq4m71nbr8g5bhkv8wl8lhyljs5jgpnkzw7ibfaisr6j"; depends=[BiocGenerics DiffCorr igraph psych SummarizedExperiment WGCNA]; }; - diffcyt = derive2 { name="diffcyt"; version="1.1.1"; sha256="17g08x65glkgjn5h24h45fi9qdq53s9bmn323zpnc6012p8cx8vb"; depends=[circlize ComplexHeatmap dplyr edgeR flowCore FlowSOM limma lme4 magrittr multcomp reshape2 S4Vectors SummarizedExperiment tidyr]; }; + diffHic = derive2 { name="diffHic"; version="1.13.7"; sha256="07w2djzjsla6z7dy2g2dr0zfc7p1r88i6vgs4fmp0jr0ifsc3dal"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit Rcpp rhdf5 Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment zlibbioc]; }; + diffcoexp = derive2 { name="diffcoexp"; version="1.1.2"; sha256="1nrhdhzz5768ah9p3z5xszn48q6swawz3k9d72lxywm1yx0yqy5c"; depends=[BiocGenerics DiffCorr igraph psych SummarizedExperiment WGCNA]; }; + diffcyt = derive2 { name="diffcyt"; version="1.1.11"; sha256="1chm02ixzh7627xmdpb91zhymamxnc2j3n7di97yc1fgv83bm0bx"; depends=[circlize ComplexHeatmap dplyr edgeR flowCore FlowSOM limma lme4 magrittr multcomp reshape2 S4Vectors SummarizedExperiment tidyr]; }; diffloop = derive2 { name="diffloop"; version="1.9.0"; sha256="0wfnh79xkfkkzm3rkx90i0ij81l33ssm03b91mfq02yzijqv5dzv"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; }; - diffuStats = derive2 { name="diffuStats"; version="0.105.0"; sha256="1dhnqf2nljmc3pvn9hwmnihlgg5qwjnh5almfzw9vgnwm10yrkjl"; depends=[expm igraph MASS Matrix plyr precrec Rcpp RcppArmadillo RcppParallel]; }; - diggit = derive2 { name="diggit"; version="1.13.0"; sha256="1zy4na2sa2g8vg7aw6n8k3965yyhal0sp6f8rrgwgh3wd8w1zf56"; depends=[Biobase ks viper]; }; - discordant = derive2 { name="discordant"; version="1.5.0"; sha256="1lnljhz2xa7xfdbi8dwq1nzdm0w9j35251yh0dndhrq0sck1a3dg"; depends=[Biobase biwt gtools MASS]; }; + diffuStats = derive2 { name="diffuStats"; version="1.1.0"; sha256="02269q356hvddnsi87p141cdyl1bmprarm9hqvpyjj244a8nirrv"; depends=[expm igraph MASS Matrix plyr precrec Rcpp RcppArmadillo RcppParallel]; }; + diggit = derive2 { name="diggit"; version="1.13.1"; sha256="1sryn5n6vrc9cf7gsz9xgg6hp9gn18m7h9zz286l1p5cvmk4y1i9"; depends=[Biobase ks viper]; }; + discordant = derive2 { name="discordant"; version="1.5.2"; sha256="011vh7xzxldfmid6w4g29b7s4w81lqifwxfj6r0d6725pa3bcxb4"; depends=[Biobase biwt gtools MASS]; }; dks = derive2 { name="dks"; version="1.27.0"; sha256="04da9f6ckqzw8dppxrrcc7aqgkb980jq1g15dkmzx9ys54bnhh78"; depends=[cubature]; }; - dmrseq = derive2 { name="dmrseq"; version="1.1.12"; sha256="0whd2fwvbf7xxxdw2dmfpn1xp3xp7w8jli9n0nj2yi0p0a98889n"; depends=[AnnotationHub annotatr BiocParallel bsseq bumphunter DelayedMatrixStats GenomeInfoDb GenomicRanges ggplot2 IRanges locfit matrixStats nlme outliers RColorBrewer rtracklayer S4Vectors]; }; - doppelgangR = derive2 { name="doppelgangR"; version="1.9.5"; sha256="16d6j10b57llfwvg7kcimmhisg1rqmnvv3pb46fgn1mldahmiziq"; depends=[Biobase BiocParallel digest impute mnormt SummarizedExperiment sva]; }; - drawProteins = derive2 { name="drawProteins"; version="1.1.0"; sha256="1bhdz04d8xv8hx821n6scni9gpc8r6qqs954i9dc1p366x995y8c"; depends=[dplyr ggplot2 httr]; }; + dmrseq = derive2 { name="dmrseq"; version="1.1.21"; sha256="15jvpy5n27vdb387qmcv63c2fs5pnx5zdsg1h2b99cil650b1c0s"; depends=[AnnotationHub annotatr BiocParallel bsseq bumphunter DelayedMatrixStats GenomeInfoDb GenomicRanges ggplot2 IRanges locfit matrixStats nlme outliers RColorBrewer rtracklayer S4Vectors]; }; + doppelgangR = derive2 { name="doppelgangR"; version="1.9.6"; sha256="07y79wbb82j4iqh04rcjg66qkngply7s4b2hcmc5i6g5ycar5cmv"; depends=[Biobase BiocParallel digest impute mnormt SummarizedExperiment sva]; }; + drawProteins = derive2 { name="drawProteins"; version="1.1.1"; sha256="12n5pi0yj692k9wridiwnjazcajknlpvjbl7wav6408lg4ph5z6p"; depends=[dplyr ggplot2 httr readr stringr]; }; dualKS = derive2 { name="dualKS"; version="1.41.0"; sha256="125gpaykiy2cplkvixghj2c1xh08zga7jvi2xmsh0j1illdssab5"; depends=[affy Biobase]; }; - dupRadar = derive2 { name="dupRadar"; version="1.11.0"; sha256="17m3xmw8m4qaljlz3kw158mrnqcm3ss0c8dqla8j4p33mfyzc7qy"; depends=[Rsubread]; }; - dyebias = derive2 { name="dyebias"; version="1.41.0"; sha256="0c4z54pw2pdfg4z2mm70w6h4my2kv1swndy50r4bjv0ll46yyvcs"; depends=[Biobase marray]; }; + dupRadar = derive2 { name="dupRadar"; version="1.11.1"; sha256="0myl9j77gpjgkqz24vxnf8x889qa06xr54bgmr32jhb0n6i9km90"; depends=[Rsubread]; }; + dyebias = derive2 { name="dyebias"; version="1.41.2"; sha256="0mjin0pvpi9z9vq8pj5smbz4968za5n31aclgwaiydy5lfmqd6zz"; depends=[Biobase marray]; }; easyRNASeq = derive2 { name="easyRNASeq"; version="2.17.0"; sha256="0siki1k4qvkgkyhldrz7i05vhria9nd9yvf848a4gkx4l68v2189"; depends=[Biobase BiocGenerics BiocParallel biomaRt Biostrings DESeq edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD Rsamtools S4Vectors ShortRead SummarizedExperiment]; }; ecolitk = derive2 { name="ecolitk"; version="1.53.0"; sha256="14df276m23zlmz6q2lhbv2j91wj2jaxhs6wnl5x5gnjj1p8jv6wj"; depends=[Biobase]; }; - edge = derive2 { name="edge"; version="2.13.0"; sha256="1y1g10lkpkv0z6sk79ir91jarx0gdl9fy5lx4snykq1amk7b9ib1"; depends=[Biobase jackstraw MASS qvalue snm sva]; }; - edgeR = derive2 { name="edgeR"; version="3.23.3"; sha256="0lz12phiqppzyvq1mf6gfdvzpqf2jpf0635n6vym7nqpxpksrgiy"; depends=[limma locfit Rcpp]; }; - eegc = derive2 { name="eegc"; version="1.7.4"; sha256="1q3fslmrw66z7x3anl8w7hszgz5qlq2f7d9hp9r6x4acipxni5ff"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; }; - eiR = derive2 { name="eiR"; version="1.21.0"; sha256="0s0xrnxzrwp4cc0jw3a0vpx7psyiwjz4a5y3ajxr68lq7k09hdma"; depends=[BiocGenerics ChemmineR DBI digest gespeR RcppAnnoy RCurl RUnit snow snowfall]; }; + edge = derive2 { name="edge"; version="2.13.2"; sha256="1qjsxydfdzr2zrz5ns69w743rsfhxcmp7i13ax7pz5kry2sf0hl1"; depends=[Biobase jackstraw MASS qvalue snm sva]; }; + edgeR = derive2 { name="edgeR"; version="3.23.7"; sha256="0mwx3qqf2c8g9p03qxy2qixri8jm2wxd642zskl2173r05iba2sm"; depends=[limma locfit Rcpp]; }; + eegc = derive2 { name="eegc"; version="1.7.5"; sha256="1dhfzsi0avamj3bnp0p99ba3lc5dw83b0pl7idfhnh5yp4imv6nf"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; }; + eiR = derive2 { name="eiR"; version="1.21.1"; sha256="0zk1jf0n2kpajqpnlwwi2814vrbmy8gixnnkapflcbdl0z25m25z"; depends=[BiocGenerics ChemmineR DBI digest gespeR RcppAnnoy RCurl RUnit snow snowfall]; }; eisa = derive2 { name="eisa"; version="1.33.0"; sha256="18jk4iwav2r95wfjynl9dwnhsm5n97kq0i7xv5dhgw2gqh5yfv64"; depends=[AnnotationDbi Biobase BiocGenerics Category DBI genefilter isa2]; }; - enrichplot = derive2 { name="enrichplot"; version="1.1.2"; sha256="0hnh32gkayps5zh7hddgwrsyskq19i2wqbs1ph627fbckk1xqzlr"; depends=[AnnotationDbi cowplot DOSE ggplot2 ggraph ggridges GOSemSim igraph reshape2 UpSetR]; }; - ensemblVEP = derive2 { name="ensemblVEP"; version="1.23.0"; sha256="0sz0xsnw4ycq1rja9nzdzayralrnvnds6adxg1bzbgsgnhfi9qv0"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; - ensembldb = derive2 { name="ensembldb"; version="2.5.2"; sha256="047c06v6d3qxw72bj0ynqvh3sk9jyv3pswf15i132qg12jq7yn8r"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; }; - epiNEM = derive2 { name="epiNEM"; version="1.5.0"; sha256="1kiaz5w2c793n3038qr8jyjgbw0shn8ljrargl0pk3d0i66cqah4"; depends=[BoolNet e1071 graph gtools igraph lattice latticeExtra minet nem pcalg RColorBrewer]; }; + enrichplot = derive2 { name="enrichplot"; version="1.1.7"; sha256="14i800cnlgc8bm8g5rlgl4rd9ajbpgljg3bhqh89zfgvvj6xy3v1"; depends=[AnnotationDbi cowplot DOSE europepmc ggplot2 ggplotify ggraph ggridges GOSemSim gridExtra igraph purrr RColorBrewer reshape2 UpSetR]; }; + ensemblVEP = derive2 { name="ensemblVEP"; version="1.23.1"; sha256="0sh1c2pmyp3lxabm2if4266mczb1as562hbyzxd3dq79n7s0wijj"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; }; + ensembldb = derive2 { name="ensembldb"; version="2.5.9"; sha256="0sbrcfg4d8yqpls11ba05qgddg1y8s23fpq68560wrzippz4j2p7"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; }; + epiNEM = derive2 { name="epiNEM"; version="1.5.2"; sha256="1wqn5mqjxw6i21byig7b0cypiws6kjq6vjwcafg6dxry2fx675iw"; depends=[BoolNet e1071 graph gtools igraph lattice latticeExtra minet nem pcalg RColorBrewer]; }; epigenomix = derive2 { name="epigenomix"; version="1.21.0"; sha256="11vcdklmg7ghwr3da1n5bnm272m0wgqinhc1gj3i6wpgcvijnwr3"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; }; - epivizr = derive2 { name="epivizr"; version="2.11.0"; sha256="14mmgfl9hqyx760l1c56hgfswbqpr34afvlyzjc459kyr8i57b5q"; depends=[epivizrData epivizrServer GenomicRanges IRanges S4Vectors]; }; - epivizrChart = derive2 { name="epivizrChart"; version="1.3.0"; sha256="0gbisd84w11fyl4zwwhakv2vv729ly9vh88zwixv46y4y1lln92v"; depends=[epivizrData epivizrServer htmltools rjson]; }; - epivizrData = derive2 { name="epivizrData"; version="1.9.0"; sha256="1r6pqsl8fyzqgwmg5msad2bsh7drgbyk39sn84pfrrv66zpp6yxj"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; }; - epivizrServer = derive2 { name="epivizrServer"; version="1.9.1"; sha256="01177j6yhiwbiarpj0v98dv4rcfhxyj9s7brxmzi9s3qrkfw9787"; depends=[httpuv mime R6 rjson]; }; - epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.9.0"; sha256="1jkhwa3wc391x961hy9k5bhbp5zjijs7y9fjy836yc54kdxghdq4"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; }; + epivizr = derive2 { name="epivizr"; version="2.11.1"; sha256="08x7zbqpi3mrgkilibm0nrkqv7v4zr4l6a0xzgln3y4ns226lvy1"; depends=[epivizrData epivizrServer GenomicRanges IRanges S4Vectors]; }; + epivizrChart = derive2 { name="epivizrChart"; version="1.3.4"; sha256="18j25cyimifrblfipfjlazhpp10h606shgw9rq7b351gnr6a92ac"; depends=[BiocGenerics epivizrData epivizrServer htmltools rjson]; }; + epivizrData = derive2 { name="epivizrData"; version="1.9.4"; sha256="0fscvaq46rvnvpcbzli8mrk4ig7ik6q7yprgf1dmj40a7pcx48j3"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; }; + epivizrServer = derive2 { name="epivizrServer"; version="1.9.4"; sha256="0pxpmqbkwsh4g72zdr7c0dsxwxm538cs1fv6y1ns1mpiv9k4wmcl"; depends=[httpuv mime R6 rjson]; }; + epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.9.1"; sha256="0snqd11np3zksrxmya5pb6fbwx5k3iipqika1ig3wmvry1czrsr9"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; }; erccdashboard = derive2 { name="erccdashboard"; version="1.15.0"; sha256="0g8b2ngfc5a6cagpiqh1q2k66s3d275r03z1yb2lvaqv1bprx0s7"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; }; erma = derive2 { name="erma"; version="0.13.1"; sha256="01s2rpcbhd9hi2md5nzccral4ffp3xjl3qkkhm42q114dfbk5ccp"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel GenomeInfoDb GenomicFiles GenomicRanges ggplot2 Homo_sapiens IRanges rtracklayer S4Vectors shiny SummarizedExperiment]; }; - esATAC = derive2 { name="esATAC"; version="1.3.1"; sha256="0jdn6xhwvlsv6gh0lhmwkznlnv71dd3875qvna5livjvs2m8m84w"; depends=[AnnotationDbi BiocGenerics BiocInstaller Biostrings BSgenome ChIPseeker clusterProfiler corrplot DiagrammeR digest GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2016 knitr magrittr motifmatchr R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; }; - esetVis = derive2 { name="esetVis"; version="1.7.1"; sha256="0xhgq2w38wfyg1ixh455ppi0880yfp44ld8y44l8yz2646qp904d"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; }; + esATAC = derive2 { name="esATAC"; version="1.3.6"; sha256="1qwq2vchc1jyqy6h141ygkibz1i5nxfvciv7mqkz7sp6a3i2a149"; depends=[AnnotationDbi BiocGenerics BiocManager Biostrings BSgenome ChIPseeker clusterProfiler corrplot DiagrammeR digest GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2016 knitr magrittr motifmatchr R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; }; + esetVis = derive2 { name="esetVis"; version="1.7.3"; sha256="0yr2rbpj2rddr50v4ws21jl16ylnjan5ag7m629lcrp34lxn7b73"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; }; eudysbiome = derive2 { name="eudysbiome"; version="1.11.0"; sha256="0372hl9jsk225zjm3ca63q95x4rcnj4i13r7192gfxzisy7y9i36"; depends=[Biostrings plyr R_utils Rsamtools]; }; exomeCopy = derive2 { name="exomeCopy"; version="1.27.0"; sha256="003r5750vnadkvc19aaw8rf4qlfs1015nmndmsaazbg70dwkkdyl"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; }; exomePeak = derive2 { name="exomePeak"; version="2.15.0"; sha256="1xyx8c1sflf98fp2588cvwmpz7f4bji6mwaw0297cj7h4893nb2a"; depends=[GenomicAlignments GenomicFeatures Rsamtools rtracklayer]; }; explorase = derive2 { name="explorase"; version="1.45.0"; sha256="18cch1m5k8sr9fjgfqv6ya2miwin89viq7sigpdv15r0xiz1js77"; depends=[limma rggobi RGtk2]; }; - fCCAC = derive2 { name="fCCAC"; version="1.7.1"; sha256="1cpma76xn4ddqyjsyhlgwa812v4p2kkby77diyy7gxha843ylncl"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; }; - fCI = derive2 { name="fCI"; version="1.11.0"; sha256="0h94ivm66d3cnrf0cnrymq3b4a2v5jg38ylv8wylnidj5g98czap"; depends=[FNN gtools psych rgl VennDiagram zoo]; }; + fCCAC = derive2 { name="fCCAC"; version="1.7.2"; sha256="18hbjv0c53mr9751h27b1spn1kc47wvbkh0p35y68akjk815gfrw"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; }; + fCI = derive2 { name="fCI"; version="1.11.1"; sha256="0b9n1vigqd7hvyqpgdaqdpz1iqmng2xl3zkgbasqyq71crcfchwv"; depends=[FNN gtools psych rgl VennDiagram zoo]; }; fabia = derive2 { name="fabia"; version="2.27.0"; sha256="0lp2h8px9f4czvld93v1cpra31375qwvyfaq336jc7ib2myvdclz"; depends=[Biobase]; }; factDesign = derive2 { name="factDesign"; version="1.57.0"; sha256="1kf98xygnq5pwjl7ak5jasrkgnrqhzpb81gljgsc0xp3a1mj37gn"; depends=[Biobase]; }; farms = derive2 { name="farms"; version="1.33.0"; sha256="1xbndc128m1f5jv8firhgsbgyqvwrxma22182p5axxjf5qwymnl9"; depends=[affy Biobase MASS]; }; @@ -997,159 +1070,166 @@ in with self; { fgsea = derive2 { name="fgsea"; version="1.7.1"; sha256="1aiiqc3jbanlxa6q3inqzj1h81dpar2i05bmaja38k7inciaysa0"; depends=[BiocParallel data_table fastmatch ggplot2 gridExtra Matrix Rcpp]; }; flagme = derive2 { name="flagme"; version="1.37.0"; sha256="0pjyi90l7k2i7bm93p9yyvrx18jmwcg0gaj2wixa0inyx9w5bymc"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; }; flipflop = derive2 { name="flipflop"; version="1.19.0"; sha256="0283bks3jbscnvyj51jm3z47rvdpfmaj40bc2h1ck8md82jrhiqj"; depends=[GenomicRanges IRanges Matrix]; }; - flowAI = derive2 { name="flowAI"; version="1.9.1"; sha256="1j2a7aivy54vlf9vhk2d12wfzr3jdqq6582wd7pi2sg5j15mbl7v"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 rmarkdown scales]; }; + flowAI = derive2 { name="flowAI"; version="1.11.3"; sha256="1ha80s8w2mcy72r2h6kj5sq0qrwkan4vzxpy2lf9frbpxrdkw696"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 rmarkdown scales]; }; flowBeads = derive2 { name="flowBeads"; version="1.19.0"; sha256="16h0jd88nada5lsaxl7q1m3nqf7gzqc1hw9cv5q96qa8n13a50la"; depends=[Biobase flowCore knitr rrcov xtable]; }; flowBin = derive2 { name="flowBin"; version="1.17.0"; sha256="0axib7fny5n1h0fcisy2ll67m1illv41swwi1xdc37d2v605c6jk"; depends=[BiocGenerics class flowCore flowFP limma snow]; }; flowCHIC = derive2 { name="flowCHIC"; version="1.15.0"; sha256="1qsa6lkdang9x44wva0dwkgvv4kxqadk3jvjkg0q59bdf137irrs"; depends=[EBImage flowCore ggplot2 hexbin vegan]; }; - flowCL = derive2 { name="flowCL"; version="1.19.1"; sha256="1fwa5r4hxnfya5ylzgx61nakfalsc0ahvy3da4xj78l52w17bjah"; depends=[graph Rgraphviz SPARQL]; }; + flowCL = derive2 { name="flowCL"; version="1.19.3"; sha256="0rp3lrxk3sdwjv939kjkc246pwifidn6bvm6lk115yqa03ymii3w"; depends=[graph Rgraphviz SPARQL]; }; flowClean = derive2 { name="flowClean"; version="1.19.0"; sha256="091d79vx5w76xhhjm1zvjfyfv9pn4ni91a85yq2ca4laplsd0nqn"; depends=[bit changepoint flowCore sfsmisc]; }; - flowClust = derive2 { name="flowClust"; version="3.19.0"; sha256="1wkxfk1962cxwax2giyzva771rjxjcjy70vd9lsi7qkkxy5r3fdy"; depends=[Biobase BiocGenerics clue ellipse flowCore flowViz graph MCMCpack mnormt RBGL]; }; - flowCore = derive2 { name="flowCore"; version="1.47.3"; sha256="0dp0aks75xzihg1nbyh441v76pgl3ikznzg1csswlzsnll4s6gdv"; depends=[BH Biobase BiocGenerics corpcor graph matrixStats Rcpp rrcov]; }; + flowClust = derive2 { name="flowClust"; version="3.19.1"; sha256="0sdssv5bingj6zs0jp0ddfckkmbx3kljhh7snv74b0k0f3lndg4h"; depends=[Biobase BiocGenerics clue corpcor ellipse flowCore flowViz graph mnormt]; }; + flowCore = derive2 { name="flowCore"; version="1.47.9"; sha256="03wzl92yv5zg4rgbffd07lzb69xk3flf1fg640b8kw6527wbgfkz"; depends=[BH Biobase BiocGenerics corpcor graph MASS matrixStats Rcpp rrcov]; }; flowCyBar = derive2 { name="flowCyBar"; version="1.17.0"; sha256="1c3a12slk8z8y1vr8j09p2k5h2pw697ysk0a74p6n20sfl1zd3h9"; depends=[gplots vegan]; }; - flowDensity = derive2 { name="flowDensity"; version="1.15.0"; sha256="0ppvvcd9brm1xqrlz7cdj35knylahqyafaabm4b7qdnwf0nz578x"; depends=[car flowCore flowWorkspace gplots RFOC rgeos sp]; }; + flowDensity = derive2 { name="flowDensity"; version="1.15.2"; sha256="1qadx0lxvk74rapgmibp9fix19zdyg3illgl7qfnzkkadbjc1bbw"; depends=[car flowCore flowWorkspace gplots RFOC rgeos sp]; }; flowFP = derive2 { name="flowFP"; version="1.39.0"; sha256="02n85dv2qvxzwdi44mc7awvxc26nbwpbzawb0ikjv8gwf4www9ch"; depends=[Biobase BiocGenerics flowCore flowViz]; }; - flowFit = derive2 { name="flowFit"; version="1.19.0"; sha256="0ydpczklwaf0lr1vhz0fcp9qi29gc0hbn8l4qnfa4l7r2s3md418"; depends=[flowCore flowViz gplots kza minpack_lm]; }; - flowMap = derive2 { name="flowMap"; version="1.19.0"; sha256="1viidnbhw054q1vl4d6xqsz1h1y764w1jsjs9nqgfnpxqmrlgls2"; depends=[abind ade4 doParallel Matrix reshape2 scales]; }; - flowMatch = derive2 { name="flowMatch"; version="1.17.0"; sha256="0b1da6sfaykwj0dk4hbrj71q209jyarl0x40i5n324nj8r4ja7hz"; depends=[Biobase flowCore Rcpp]; }; + flowFit = derive2 { name="flowFit"; version="1.19.1"; sha256="0v7qdrskm47d2j16gag2lv63051hz182l7j5j2m36jh1fbddwhz6"; depends=[flowCore flowViz gplots kza minpack_lm]; }; + flowMap = derive2 { name="flowMap"; version="1.19.1"; sha256="1q3gvb4q2d3lh8828hlnxdrqzlsfm4chl5rvf99nbmapazz37r7g"; depends=[abind ade4 doParallel Matrix reshape2 scales]; }; + flowMatch = derive2 { name="flowMatch"; version="1.17.1"; sha256="0ymvn6nyxp95yb23y6lr0ks297m1djqaisz34wssxqk524zjrgbr"; depends=[Biobase flowCore Rcpp]; }; flowMeans = derive2 { name="flowMeans"; version="1.41.0"; sha256="1ixzwry1435w20w40z87yhscbgskbldqmrz0x7nqvlqp5yn1ax71"; depends=[Biobase feature flowCore rrcov]; }; flowMerge = derive2 { name="flowMerge"; version="2.29.0"; sha256="0imabypbjyn83jyb3isichi7fy4p4nkmsphcqbkimpjrfgc391kw"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; }; - flowPeaks = derive2 { name="flowPeaks"; version="1.27.0"; sha256="12fw6vp5lar9y8k2hx8pjnr2km5bs1rjgdam3ifrfdj0rgicf6rk"; depends=[]; }; - flowPloidy = derive2 { name="flowPloidy"; version="1.7.0"; sha256="06lwd20c97lq5b9z11agvi4d9h601pxgzsi3xzkqp3q8c7xnpa1a"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; }; + flowPeaks = derive2 { name="flowPeaks"; version="1.27.1"; sha256="07r0l4iyc9jrraswmd0j2lzrjw2ch7wkfniisr148k3a6gvhl0wq"; depends=[]; }; + flowPloidy = derive2 { name="flowPloidy"; version="1.7.3"; sha256="1m7vr6z9ca04xk876s9mc36hjr1wd9bb3kgx1hi7zd1aazzis1rb"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; }; flowPlots = derive2 { name="flowPlots"; version="1.29.0"; sha256="0ylxkvhzghzybsi20lpprz430sl2d6mnrkbwp8bbsysr2ymsjml6"; depends=[]; }; - flowQ = derive2 { name="flowQ"; version="1.41.0"; sha256="0290mk6zj2f2y4qiks9z9lnrl87fa0024idmdcf7slwlngf59mfd"; depends=[BiocGenerics bioDist flowCore flowViz geneplotter IRanges lattice latticeExtra mvoutlier outliers parody RColorBrewer]; }; + flowQ = derive2 { name="flowQ"; version="1.41.1"; sha256="15n2w9958hp3w0rigx80p2gj5l4bg8zycv8h2l31ysdg34lij5r7"; depends=[BiocGenerics bioDist flowCore flowViz geneplotter IRanges lattice latticeExtra mvoutlier outliers parody RColorBrewer]; }; flowQB = derive2 { name="flowQB"; version="2.9.0"; sha256="0d4n8qxja851z4d7ran9wr4rhfa64mnkhz7rqwa0vggrq1y0ksja"; depends=[extremevalues flowCore]; }; - flowStats = derive2 { name="flowStats"; version="3.39.0"; sha256="1bz0saqkxznyq9ilabi1j4nwd18yk1p740asj7zlirqhiik2x20m"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS ncdfFlow]; }; + flowStats = derive2 { name="flowStats"; version="3.39.4"; sha256="1cj7dwvqa9x3lxblfvxmsl88zc91fbjhh1viy3s2m88kxl6517vr"; depends=[Biobase BiocGenerics cluster fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS ncdfFlow RColorBrewer]; }; flowTime = derive2 { name="flowTime"; version="1.5.0"; sha256="0qh2p696xh8xsi0j7d6s75kbf8ajm4virfs8c6c1rn48n4grhlpy"; depends=[flowCore plyr]; }; flowTrans = derive2 { name="flowTrans"; version="1.33.0"; sha256="1fqw49s9dgz4khq3m73bf8f7vy9xzhdl91n0rkmcnwq7kd6wm5n9"; depends=[flowClust flowCore flowViz]; }; flowType = derive2 { name="flowType"; version="2.19.0"; sha256="1313ak0n79pvhzpckrapbkzrzxhd8qnxawpvagm92lsdg5p79mfc"; depends=[BH Biobase flowClust flowCore flowMeans flowMerge Rcpp rrcov sfsmisc]; }; - flowUtils = derive2 { name="flowUtils"; version="1.45.0"; sha256="1vrbyzhifqaf47a73hac75s4dnsg6fys3nhhl1rf81hsjhqh7q80"; depends=[Biobase corpcor flowCore graph RUnit XML]; }; + flowUtils = derive2 { name="flowUtils"; version="1.45.2"; sha256="1x6ng8wvwqhq76r3wm62xyi29dq0086yvklv2ddv2gfc7ifzk8nl"; depends=[Biobase corpcor flowCore graph RUnit XML]; }; flowVS = derive2 { name="flowVS"; version="1.13.0"; sha256="16r8ig33ym1d8hp2hvxnlszifc0qpmd4vnqzg1nn31a4j3xf575r"; depends=[flowCore flowStats flowViz]; }; flowViz = derive2 { name="flowViz"; version="1.45.0"; sha256="076hjz0mvc7pygmlrapsgg6scsxkzd714yg4wq8r8fbbpblqhkxf"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; }; - flowWorkspace = derive2 { name="flowWorkspace"; version="3.29.4"; sha256="1669sl43r31ikj5mjzgmlynls994607xg0x2rz1y1dxcy84rb9vc"; depends=[BH Biobase BiocGenerics cytolib data_table dplyr flowCore flowViz graph gridExtra lattice latticeExtra matrixStats ncdfFlow RBGL RColorBrewer Rcpp Rgraphviz RProtoBufLib scales stringr XML]; }; - flowcatchR = derive2 { name="flowcatchR"; version="1.15.0"; sha256="0m1wbddxi2sifhpil00gd9vr27i75h30cw3a2m59hccxw4di139j"; depends=[abind BiocParallel colorRamps EBImage plotly shiny]; }; - fmcsR = derive2 { name="fmcsR"; version="1.23.0"; sha256="1m8v98qi3x2cwr74ynndb0ilw8m8n0dz7w7fpyv0fm3s0vy3x0rx"; depends=[BiocGenerics ChemmineR RUnit]; }; + flowWorkspace = derive2 { name="flowWorkspace"; version="3.29.10"; sha256="0qch9hbpxqwma1kg9jrmnyf7d9zc714pjybpzphkgx9c9cdbaqzy"; depends=[BH Biobase BiocGenerics cytolib data_table dplyr flowCore flowViz graph gridExtra lattice latticeExtra matrixStats ncdfFlow RBGL RColorBrewer Rcpp Rgraphviz RProtoBufLib scales stringr XML]; }; + flowcatchR = derive2 { name="flowcatchR"; version="1.15.3"; sha256="04njcbq0bi53pwkfrf489l3fws63w9l981cf4iadkadbk5dl2hav"; depends=[abind BiocParallel colorRamps EBImage plotly shiny]; }; + fmcsR = derive2 { name="fmcsR"; version="1.23.3"; sha256="1f2la9cx08yd3y96n2hkc6dzqvj5kya58rghr711axjmjfcigw2y"; depends=[BiocGenerics ChemmineR RUnit]; }; focalCall = derive2 { name="focalCall"; version="1.15.0"; sha256="1vnihlpxaplnjp7h9n3k3py0103qz98dnkm1p7hns93pf185ih05"; depends=[CGHcall]; }; frma = derive2 { name="frma"; version="1.33.0"; sha256="02n251fwg34f0mkvingrsv1n0v77cvmpmd44rs1a4qyl5nj3x9v6"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; }; frmaTools = derive2 { name="frmaTools"; version="1.33.0"; sha256="1w62s3i6q92ka44dy8sqid21fgpjjghmnyavj3swx5czpn476vny"; depends=[affy Biobase DBI preprocessCore]; }; - funtooNorm = derive2 { name="funtooNorm"; version="1.5.0"; sha256="175np47a1n3l9dkpfza9wdndxk3adk9np87c8hi4ybhjbx9w8bj5"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; }; + funtooNorm = derive2 { name="funtooNorm"; version="1.5.1"; sha256="0pqh1hiblr6989wvdx7fmxkkj451xijjj6z9jgqz2c08qpk2d4h8"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; }; gCMAP = derive2 { name="gCMAP"; version="1.25.0"; sha256="0mp0cg33slfpnqzk2fsggpb3dfgq95isj42lia0i3hkwkdfcisly"; depends=[annotate AnnotationDbi bigmemory bigmemoryExtras Biobase Category DESeq genefilter GSEABase GSEAlm limma Matrix]; }; gCMAPWeb = derive2 { name="gCMAPWeb"; version="1.21.0"; sha256="15fmiii9kkiy1p9d2h7hg9fi3kacifz6113hpkzkk0lic4phncg5"; depends=[annotate AnnotationDbi Biobase BiocGenerics brew gCMAP GSEABase hwriter Rook yaml]; }; - gCrisprTools = derive2 { name="gCrisprTools"; version="1.9.1"; sha256="1nscfxbyvy596sak9lj5g1wcbk7zprgy5654bbv69ain9p1i3kzc"; depends=[Biobase ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg]; }; + gCrisprTools = derive2 { name="gCrisprTools"; version="1.9.3"; sha256="1msp2xfd3h1bj04abad714r9rmgbr9w6g26lj7s8j451jjlw57na"; depends=[Biobase ggplot2 limma PANTHER_db rmarkdown RobustRankAggreg]; }; gQTLBase = derive2 { name="gQTLBase"; version="1.13.0"; sha256="0rszhclakgc0xyg8jdb9mxgwaqcb28rcs9pyrg31d0wxi44c90w2"; depends=[BatchJobs BBmisc BiocGenerics bit doParallel ff ffbase foreach GenomicFiles GenomicRanges rtracklayer S4Vectors SummarizedExperiment]; }; + gQTLstats = derive2 { name="gQTLstats"; version="1.13.1"; sha256="0apicd22s2yx57ypqvnmxkh3ca06r5cq3mj7x3hz57z9sv99bq1w"; depends=[AnnotationDbi BatchJobs BBmisc beeswarm Biobase BiocGenerics doParallel dplyr erma ffbase foreach GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges ggbeeswarm ggplot2 gQTLBase HardyWeinberg Homo_sapiens IRanges limma mgcv plotly reshape2 S4Vectors shiny snpStats SummarizedExperiment VariantAnnotation]; }; gaga = derive2 { name="gaga"; version="2.27.0"; sha256="09q5xfki8nnp5z4ia0l07pnvsmiwag7ahr1bxbic9aajql873ipk"; depends=[Biobase coda EBarrays mgcv]; }; - gage = derive2 { name="gage"; version="2.31.0"; sha256="1lkq0xq7qz8vzd0y996c8yskh8wkm15hqs68krbs9z08scwjzpqg"; depends=[AnnotationDbi graph KEGGREST]; }; + gage = derive2 { name="gage"; version="2.31.2"; sha256="0m4mp78g3sxa19rkw9p4d6sxw1ic9km6z5hir8d1lqg0hmv9y2ki"; depends=[AnnotationDbi graph KEGGREST]; }; gaggle = derive2 { name="gaggle"; version="1.49.0"; sha256="0bi19b9ndccrky2i89scjzgna5b2gj0p74licynn8pm1jfwla584"; depends=[graph rJava RUnit]; }; - gaia = derive2 { name="gaia"; version="2.25.0"; sha256="009lclb7dvy1mgxzxmp8nywcbq0jdq26qdla0vl7jb8p8vjp5k1c"; depends=[]; }; - garfield = derive2 { name="garfield"; version="1.9.0"; sha256="1pndkw2an642ldgz0lw07l70gybj5npfs9w8qi2wm77fqfih8lj0"; depends=[]; }; - gcapc = derive2 { name="gcapc"; version="1.5.0"; sha256="196fi5c1bhaq7qfxvw8jfbfahjygk1a6ykkjlrbqkhk60lzk9gbl"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS matrixStats Rsamtools S4Vectors]; }; + gaia = derive2 { name="gaia"; version="2.25.3"; sha256="10qcjcfqiwa2xcgh2jpiq5hp8i8ihbl4nz503ndcz3j54rw3pjfn"; depends=[]; }; + garfield = derive2 { name="garfield"; version="1.9.1"; sha256="1fj196imnr9vb8pg6rxf46n5yw7v3g1w0q8h49psrvw7zrmzknsg"; depends=[]; }; + gcapc = derive2 { name="gcapc"; version="1.5.1"; sha256="1fk3vqxl6xpf4xhmacsn3ywwixs1brm24pfyshlbwp27rwj3jpzw"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS matrixStats Rsamtools S4Vectors]; }; gcatest = derive2 { name="gcatest"; version="1.11.0"; sha256="0x0k557fydigj81610a39b8hg973wbjsfj0ailpjfa1grp77csa1"; depends=[lfa]; }; - gcrma = derive2 { name="gcrma"; version="2.53.0"; sha256="14gcna1sagqizaryq5hv5907hw7agds8v0s2n1hd8k1yrpayhkwc"; depends=[affy affyio Biobase BiocInstaller Biostrings XVector]; }; - gdsfmt = derive2 { name="gdsfmt"; version="1.17.2"; sha256="13rkbhjis5fjzalj03bpckq4w177c6v2m4p7743yvjhqhyyah9pq"; depends=[]; }; - geNetClassifier = derive2 { name="geNetClassifier"; version="1.21.0"; sha256="0ikpsmjwbiq8kidyvllx51ih0b7jnw9s1nz6z6hfz21zf98kz9p6"; depends=[Biobase e1071 EBarrays minet]; }; + gcrma = derive2 { name="gcrma"; version="2.53.1"; sha256="0qlvr4lgkddyrdvf81z60zzlbq0x7abdlgsgw1xr1xabmp7wbkrs"; depends=[affy affyio Biobase BiocManager Biostrings XVector]; }; + gdsfmt = derive2 { name="gdsfmt"; version="1.17.6"; sha256="0x44n0qrcq82kxd8w1zlbfsgmf2yxxnf1i5h9z7ajlcz46cwgaxn"; depends=[]; }; + geNetClassifier = derive2 { name="geNetClassifier"; version="1.21.1"; sha256="0fjkm6bg4g2qr5xyjjyhrpm9iijhmgy6rwd38iwimlq3qqgnm819"; depends=[Biobase e1071 EBarrays minet]; }; geecc = derive2 { name="geecc"; version="1.15.0"; sha256="0wfa0a4hlwvjsjvxk7m6lgjxjvph3392a4kskg2y1vphh916qnxr"; depends=[gplots hypergea MASS Rcpp]; }; genArise = derive2 { name="genArise"; version="1.57.0"; sha256="08hrc2y06prmacdzrd3qnlbyzrr9127jgglq7babrnhw0dffjl96"; depends=[locfit tkrplot xtable]; }; - genbankr = derive2 { name="genbankr"; version="1.9.0"; sha256="0nzbf189w2rg9hy7h7qcw3jpz9lhl2yq57rhps29lgmizgdml8qp"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; }; + genbankr = derive2 { name="genbankr"; version="1.9.2"; sha256="1ba891irw0carh6pg2r6v50g5g7am1k09zyw450rz878sfka50cj"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; }; geneAttribution = derive2 { name="geneAttribution"; version="1.7.0"; sha256="1snpd1xy66kaj2mb8xjasgm3bipydxbrbcpvp5bny9shvk6di0cf"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; }; geneClassifiers = derive2 { name="geneClassifiers"; version="1.5.0"; sha256="0qwqb1sq6bw688br5c5lxvc7dxwg1qwwb30dn9pklgfgpnjwp86n"; depends=[Biobase BiocGenerics]; }; geneRecommender = derive2 { name="geneRecommender"; version="1.53.0"; sha256="1qrlk46y1hkgva2yrf8x2smy82p4kmzjpr7kyk9381rfl64nn18q"; depends=[Biobase]; }; geneRxCluster = derive2 { name="geneRxCluster"; version="1.17.0"; sha256="0vlhskyymdnbigdq1qj9gimklcmzvybh74zn7f65if5ssqdgmj10"; depends=[GenomicRanges IRanges]; }; - geneXtendeR = derive2 { name="geneXtendeR"; version="1.7.0"; sha256="0j3k3ijq7ml52avs6np7q5137fr348xi5012dkw1nmn4sqm9dwpy"; depends=[AnnotationDbi data_table dplyr GO_db networkD3 org_Ag_eg_db org_Bt_eg_db org_Ce_eg_db org_Cf_eg_db org_Dm_eg_db org_Dr_eg_db org_Gg_eg_db org_Hs_eg_db org_Mm_eg_db org_Mmu_eg_db org_Pt_eg_db org_Rn_eg_db org_Sc_sgd_db org_Ss_eg_db org_Xl_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; }; - genefilter = derive2 { name="genefilter"; version="1.63.0"; sha256="0wn6gwj8v3xl11mhx40529hlssay79n24vn071saq2y475bxhgkl"; depends=[annotate AnnotationDbi Biobase S4Vectors survival]; }; - genefu = derive2 { name="genefu"; version="2.13.0"; sha256="1i0w1bhg93gpjwn2w2k9kz3z99vdifdf7a9nza8d79lirj4512p4"; depends=[AIMS amap biomaRt iC10 limma mclust survcomp]; }; - geneplast = derive2 { name="geneplast"; version="1.7.0"; sha256="1ydcahw9imi281xdgpr7asihavsks3jjh52nhdrx0qn5plml254r"; depends=[ape igraph snow]; }; + geneXtendeR = derive2 { name="geneXtendeR"; version="1.7.11"; sha256="1kws224q6rhzmdrgfv2695l5aah3hz6r5vacwl5akg2bja2v42yv"; depends=[AnnotationDbi BiocStyle data_table dplyr GO_db networkD3 org_Rn_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; }; + genefilter = derive2 { name="genefilter"; version="1.63.2"; sha256="0kx0fv9gjknffhvgz65y36hxcfi25rii6m35caxdrkcfm3cnrc6l"; depends=[annotate AnnotationDbi Biobase S4Vectors survival]; }; + genefu = derive2 { name="genefu"; version="2.13.1"; sha256="0b1xrxfp1swfsvvrr1nkkkmjjb6bxbjhvvm2fl2463mmgy3qdsn6"; depends=[AIMS amap biomaRt iC10 limma mclust survcomp]; }; + geneplast = derive2 { name="geneplast"; version="1.7.2"; sha256="18g39wzkcnkpp4v2fwbh3ff84b8fcwfn723hpfyla7857qjm6krp"; depends=[ape igraph snow]; }; geneplotter = derive2 { name="geneplotter"; version="1.59.0"; sha256="1yqxqxchjn31sqw3csk5y3jmshb3v5580q245skam5r5v2nw5lhb"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; }; genoCN = derive2 { name="genoCN"; version="1.33.0"; sha256="1rcly2dfm93lbsc1inm3z669l19k213zyq31kb4kkg1cnam2cflv"; depends=[]; }; - genomation = derive2 { name="genomation"; version="1.13.0"; sha256="04101y44lnxlxkyhb2gb4d0wr9cy1s1c31dsfhqgl1rhy8rxi5b4"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rsamtools rtracklayer RUnit S4Vectors seqPattern]; }; + genomation = derive2 { name="genomation"; version="1.13.1"; sha256="038fnkv0m2r47mm2cg2fmrzq776j0jfskppi7p0872rx59r0vl6y"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rsamtools rtracklayer RUnit S4Vectors seqPattern]; }; genomeIntervals = derive2 { name="genomeIntervals"; version="1.37.0"; sha256="1xinqj7zzwjxx6qxi6mxrws2ajjm8cy7g9v1773x7mh47w9rz7mw"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; }; genomes = derive2 { name="genomes"; version="3.11.0"; sha256="0vvc43ih4idj6jakm4jvwynvi4v90nndvbz18kb7nxb7fh1bl9m3"; depends=[curl readr]; }; genoset = derive2 { name="genoset"; version="1.37.0"; sha256="0awbbvhz1qzra92ghal5wrqrkya4v0wd15q75dmqxb5xx36s8if6"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges S4Vectors SummarizedExperiment]; }; - genotypeeval = derive2 { name="genotypeeval"; version="1.13.1"; sha256="0qlzqfzpb74prq6b7zg77d610i8hj0d2f7jhi4l1difcgf8y7j2j"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; }; - genphen = derive2 { name="genphen"; version="1.9.0"; sha256="1bps7mgznp5by1kfwmapnfj3vkdqiz3p3816kg9jmg7iggxn8gih"; depends=[Biostrings doParallel e1071 foreach ranger rstan]; }; + genotypeeval = derive2 { name="genotypeeval"; version="1.13.2"; sha256="10zz9jd1xsk09gh3mkm23jmqi4j5kv7d5fbjwlr2bxq4z2yjl8h4"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; }; + genphen = derive2 { name="genphen"; version="1.9.49"; sha256="0mdr79x7a036rrjdh1aqxnxskgsvvjbzyvlgcrf9jxh2yf45ciq1"; depends=[Biostrings doParallel e1071 foreach ranger rstan]; }; gep2pep = derive2 { name="gep2pep"; version="1.1.1"; sha256="0h6qf7fl2hmg5chv6g9qfj5ih4mfc6xmihqny9pzg277i5gwmdsj"; depends=[Biobase digest foreach GSEABase iterators repo rhdf5 XML]; }; gespeR = derive2 { name="gespeR"; version="1.13.0"; sha256="1qc9d8vp5s5rzw7bqbfm2n5l23yfk9d3kpmhyd4hnr9jb2h4jypp"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; }; - ggbio = derive2 { name="ggbio"; version="1.29.0"; sha256="0skf5m8qglvv2y70jppjblvpl94cgimns02kprsqp85ghmbshy7s"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; - ggcyto = derive2 { name="ggcyto"; version="1.9.10"; sha256="17pvxml685gic39ycgq2crwnznw7ih0g5bhynxziffnfg0zqb6fc"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra ncdfFlow plyr RColorBrewer scales]; }; - ggtree = derive2 { name="ggtree"; version="1.13.0"; sha256="1zkaasmb2y1k8hqjr7cbvhasmv1ykclhfqj3h0s6m6yvh2iql9nb"; depends=[ape dplyr ggplot2 magrittr purrr rlang rvcheck scales tibble tidyr tidytree treeio]; }; - girafe = derive2 { name="girafe"; version="1.33.0"; sha256="0jdckfnsfvcqf7gnfbpxw12q0la9cxzfmhhy4n492fqavnzpbfgj"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; - globalSeq = derive2 { name="globalSeq"; version="1.9.1"; sha256="105sxbs03xdfv6ikl517sj14wzn0cc92lxv5yfzabj2ys8911dl1"; depends=[]; }; - globaltest = derive2 { name="globaltest"; version="5.35.0"; sha256="150mf64cr528jzcpc9ydfs1kf9dwrr8xnw47abpkxgmfmqi6jl01"; depends=[annotate AnnotationDbi Biobase survival]; }; - gmapR = derive2 { name="gmapR"; version="1.23.0"; sha256="0c6chbf3kzx3z57gs36b0bi1bc58514sklxkplv80z7xnvxs8pl9"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; + ggbio = derive2 { name="ggbio"; version="1.29.5"; sha256="1aqj3m7jkjdzwvnk8il74v05gybd3n6b056mlwq8slmmpyngjnc6"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 rlang Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; }; + ggcyto = derive2 { name="ggcyto"; version="1.9.13"; sha256="0dhwv19dny4490jg2p7bbmzqnpyf04zms33vwssaf7xwy7i8h0q9"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra ncdfFlow plyr RColorBrewer rlang scales]; }; + ggtree = derive2 { name="ggtree"; version="1.13.6"; sha256="0hbw03ixzvmiqgacvi41mb8kjnh7s78z39900b532qd1ghmg8xrq"; depends=[ape dplyr ggplot2 magrittr purrr rlang rvcheck scales tibble tidyr tidytree treeio]; }; + girafe = derive2 { name="girafe"; version="1.33.2"; sha256="1b7sqnbj3a6p8zdaf8w7s19fijiw5ciqchxsi8i7ali46fqvqhbs"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; }; + glmSparseNet = derive2 { name="glmSparseNet"; version="0.99.36"; sha256="1qhjrpd70qfizkk64kl4spwwq8gjk7zg6ypj5gyk6pn98myvk2bm"; depends=[biomaRt dplyr forcats futile_logger ggplot2 glmnet loose_rock Matrix MultiAssayExperiment readr reshape2 rlang sparsebn sparsebnUtils STRINGdb stringr SummarizedExperiment survminer]; }; + globalSeq = derive2 { name="globalSeq"; version="1.9.4"; sha256="146zfaz0w3gdic5q50vqzynr6gzv6b0c417yi1x350ir3qn2vczk"; depends=[]; }; + globaltest = derive2 { name="globaltest"; version="5.35.1"; sha256="0q72cvh11qffkr6c17pz7a5d2wi2csk37pq9fjda11mmx1g01paq"; depends=[annotate AnnotationDbi Biobase survival]; }; + gmapR = derive2 { name="gmapR"; version="1.23.1"; sha256="0qyn39vcp7a84xjn7n4cyhk47yw9yxn9mwq81kz3fjljafy2pv9z"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; }; goProfiles = derive2 { name="goProfiles"; version="1.43.0"; sha256="19r3h8rnfs826aldlgkjgsllk4wj95rq7lq37qd927bjgvi4kbnj"; depends=[AnnotationDbi Biobase CompQuadForm GO_db stringr]; }; - goSTAG = derive2 { name="goSTAG"; version="1.5.0"; sha256="13bnzz3adj9186sp992fbjp9442nvp7f0a80jnz1nygdr0d45i7m"; depends=[AnnotationDbi biomaRt GO_db memoise]; }; + goSTAG = derive2 { name="goSTAG"; version="1.5.1"; sha256="1nazixjbh90460iqc7hgsgsilzaknjym639c5mmxcxdas96vmry1"; depends=[AnnotationDbi biomaRt GO_db memoise]; }; goTools = derive2 { name="goTools"; version="1.55.0"; sha256="1lzgsdqvwrxckg5pdbmnxldifrsm7zyvl72pl3sz8x2997b4lc97"; depends=[AnnotationDbi GO_db]; }; goseq = derive2 { name="goseq"; version="1.33.0"; sha256="102w1cxz2ab0gyzamy9rcdbf73bgkvqrm0lxasz6m2h79j9gfmc9"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; }; + gpart = derive2 { name="gpart"; version="0.99.19"; sha256="05nzlyn7n1a73qdrg8wrwjwcix4i7y43g6bycbfw07zxps8a3472"; depends=[AnnotationDbi biomaRt data_table GenomicRanges Homo_sapiens igraph IRanges OrganismDbi Rcpp TxDb_Hsapiens_UCSC_hg38_knownGene]; }; gpls = derive2 { name="gpls"; version="1.53.0"; sha256="02yca8lllmq7lmbg55kn3yhsb0s9d2b828aj08lsp5hxmyill36k"; depends=[]; }; - gprege = derive2 { name="gprege"; version="1.25.0"; sha256="123ggwjdkc2la9vbv6kmv7l7pg0wz3jzk4q0df5zm38a3nr8gy7p"; depends=[gptk]; }; - graph = derive2 { name="graph"; version="1.59.0"; sha256="1pcn9rr9j679g6hgsh235nar5via1rmgj1dqpyp7sl9zfjrcim2p"; depends=[BiocGenerics]; }; - graphite = derive2 { name="graphite"; version="1.27.2"; sha256="0c3ha2hjpzwbrv5jh2376ayd2c7j9z857m70rx8xiv5bn3kzvazz"; depends=[AnnotationDbi checkmate graph httr rappdirs]; }; - groHMM = derive2 { name="groHMM"; version="1.15.0"; sha256="1q18f8ibjwik01n54c373fss82jwamik430irgaya8q5b5659c0d"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; }; + gprege = derive2 { name="gprege"; version="1.25.2"; sha256="0qlbvss2hk3f3bfi4k4jcpyqwishkxsqq9cv846cbnkryn1xnrih"; depends=[gptk]; }; + graph = derive2 { name="graph"; version="1.59.2"; sha256="1vncpr60yl63kwlxdp1b15r81ymf28whzkkd9mz5r8f6jz184h0g"; depends=[BiocGenerics]; }; + graphite = derive2 { name="graphite"; version="1.27.6"; sha256="009gjkmnjr8y6j8dz9h19bn16qkzhvknqazrdm4pf86pn8w2gy2w"; depends=[AnnotationDbi checkmate graph httr rappdirs]; }; + groHMM = derive2 { name="groHMM"; version="1.15.1"; sha256="1a6c40bfsskh0adaqjvimn6bysfgz24lga9byznp2cf2757i9bps"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; }; gsean = derive2 { name="gsean"; version="1.1.0"; sha256="0aar598qdhppzkzrrmhzd1nkn7i3xci401yz3w5dsgz27fy12c18"; depends=[fgsea PPInfer]; }; - gtrellis = derive2 { name="gtrellis"; version="1.13.1"; sha256="1nz1hq1nmn3759cnf7w2svkk7v6lzrp85l49vjwy7wfrpk612wch"; depends=[circlize GenomicRanges GetoptLong IRanges]; }; - gwascat = derive2 { name="gwascat"; version="2.13.1"; sha256="1y595365q7hw84sgg6c307d3h1bryml4rxq1hg2vcr2ai0cbb065"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 graph Gviz Homo_sapiens IRanges Rsamtools rtracklayer S4Vectors snpStats SummarizedExperiment VariantAnnotation]; }; - gwasurvivr = derive2 { name="gwasurvivr"; version="0.99.38"; sha256="0dcza6pscq9lndk3x1bc139fh3r61lwfrm88vizyaini7xyzd2p0"; depends=[GWASTools matrixStats SummarizedExperiment survival VariantAnnotation]; }; - h5vc = derive2 { name="h5vc"; version="2.15.0"; sha256="001lz9pjr7ddlw8v69nvhmbdzzx643vd5akl7dzjx4z0kg3xyf55"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rsamtools S4Vectors]; }; + gtrellis = derive2 { name="gtrellis"; version="1.13.3"; sha256="0pg30gnbmsn498isqw3g26a5pzxbq1k0hbz4sd986ak1whgac1q3"; depends=[circlize GenomicRanges GetoptLong IRanges]; }; + gwascat = derive2 { name="gwascat"; version="2.13.5"; sha256="0p4l8skyyjblqzlcb13sj29sy6x62fakb5i56d757z6ic8pi84kx"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 gQTLstats graph Gviz Homo_sapiens IRanges Rsamtools rtracklayer S4Vectors snpStats SummarizedExperiment VariantAnnotation]; }; + gwasurvivr = derive2 { name="gwasurvivr"; version="0.99.46"; sha256="137a4vclz7h462xf2aia47kaigz2gchlhxl6v7ycv4rq48i6qjrq"; depends=[GWASTools matrixStats SNPRelate SummarizedExperiment survival VariantAnnotation]; }; + h5vc = derive2 { name="h5vc"; version="2.15.1"; sha256="1gfch3p8ylws4g22kd6xs79wsm6x65yfdaqxjhqp0cgsjlyrr29h"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rsamtools S4Vectors]; }; hapFabia = derive2 { name="hapFabia"; version="1.23.0"; sha256="0dhq26aqqmnzmx3cnwmmrqa8zx5gxq48is1wmljvfn86qixr70xr"; depends=[Biobase fabia]; }; heatmaps = derive2 { name="heatmaps"; version="1.5.0"; sha256="0lz2cxw3fxyvnmnzk95k791x8x3vjn5cif2bqp3zv2rlkwgdjd7m"; depends=[BiocGenerics Biostrings EBImage GenomeInfoDb GenomicRanges IRanges KernSmooth Matrix plotrix RColorBrewer]; }; hiAnnotator = derive2 { name="hiAnnotator"; version="1.15.0"; sha256="12q17c31j1q1jbh1z1ddlcml1wxin5s32yz9xk7dd7bxa81frpmg"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; }; hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.17.0"; sha256="1qad1winpzjwjn9wnr7xvmspza2j0islsdqh7aig767svipw8870"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator readxl rSFFreader sonicLength]; }; - hicrep = derive2 { name="hicrep"; version="1.5.0"; sha256="17k4wynjjbailalm4h0gghw5fz7gavjpdzm3ibk1gih46l24fr0d"; depends=[]; }; + hicrep = derive2 { name="hicrep"; version="1.5.1"; sha256="0vjif93dnjjqrd15gxflwlhncrr3sdrp3hw9944p4pmd1xq38i3i"; depends=[]; }; hierGWAS = derive2 { name="hierGWAS"; version="1.11.0"; sha256="0wfv8pxnm8v1lwj1cbk4d7v0cyjzra8nm8gaawwr0aqcsg7ksp2f"; depends=[fastcluster fmsb glmnet]; }; - hipathia = derive2 { name="hipathia"; version="1.1.1"; sha256="1x7aa8vbmzrfw5psyc4a7qcsnhfgcynfvp5k7qba4q5cp85gcgym"; depends=[AnnotationHub coin DelayedArray igraph limma matrixStats MultiAssayExperiment preprocessCore S4Vectors servr SummarizedExperiment]; }; - hmdbQuery = derive2 { name="hmdbQuery"; version="1.1.1"; sha256="1rkyh115mn65rq90i7g3idw1n856v3r6139rbvaai7939rbi4gg9"; depends=[S4Vectors XML]; }; + hierinf = derive2 { name="hierinf"; version="0.99.3"; sha256="0rwwdwgx1p96vgfszp01i85wa56d9djkrjnzphgcv5962smd0wka"; depends=[fmsb glmnet]; }; + hipathia = derive2 { name="hipathia"; version="1.1.3"; sha256="08yx1jpfz08zsldxvjsz9957rp1wk2744kb8248k5rwf4fmcdp4w"; depends=[AnnotationHub coin DelayedArray igraph limma matrixStats MultiAssayExperiment preprocessCore S4Vectors servr SummarizedExperiment]; }; + hmdbQuery = derive2 { name="hmdbQuery"; version="1.1.3"; sha256="0gvbfiibnb3w588ri385wwyg1x3my7a3ay6sacbjhh0j6amx9g7p"; depends=[S4Vectors XML]; }; hopach = derive2 { name="hopach"; version="2.41.0"; sha256="1i329clrw9bjxkchinadprix36xjak5x6i1zqpdj27kyr8w26gn2"; depends=[Biobase BiocGenerics cluster]; }; - hpar = derive2 { name="hpar"; version="1.23.2"; sha256="04h4xfmappx0vipw1fa9kd8n9hs4cpcfsllxcrq77akndkf1dc92"; depends=[]; }; + hpar = derive2 { name="hpar"; version="1.23.4"; sha256="0nf8w8qn63zrq2y5i5imrwv242cc884lzi92jldd24ainybp362h"; depends=[]; }; htSeqTools = derive2 { name="htSeqTools"; version="1.29.5"; sha256="0rigcwd8mc3kjsj0kxzxnspzqz0d1i58vav71p7a4cx76yrzi5z1"; depends=[Biobase BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges MASS S4Vectors]; }; hyperdraw = derive2 { name="hyperdraw"; version="1.33.0"; sha256="0qcp9p3n7gxskvw8afz7yr2msm0gikl7v3dvzvrhfypad9czplx0"; depends=[graph hypergraph Rgraphviz]; }; hypergraph = derive2 { name="hypergraph"; version="1.53.0"; sha256="1mj14bgkbs3p0smf6phfig2rcf7kd88d85djr6rq1c3vpiyhpyx3"; depends=[graph]; }; iASeq = derive2 { name="iASeq"; version="1.25.0"; sha256="0p4m13k5n974469xh8vhz8xd5b37ill3i9jmglq0fa47n7rbdjz1"; depends=[]; }; iBBiG = derive2 { name="iBBiG"; version="1.25.0"; sha256="1dbcazr88ac38g58jgr9byqaql36jvfn5bmr8gibn3hr187c5ypf"; depends=[ade4 biclust xtable]; }; - iBMQ = derive2 { name="iBMQ"; version="1.21.0"; sha256="19f1iqfcdsq0lg9hbl65qwb7lwp9n36vrdnyah63dn7k3c23p5x1"; depends=[Biobase ggplot2]; }; - iCARE = derive2 { name="iCARE"; version="1.9.0"; sha256="0z884xysrf00h56l4djq1yrm8478s4f3jqq0bz6sf5wqzibr492k"; depends=[]; }; - iCNV = derive2 { name="iCNV"; version="1.1.0"; sha256="1kqsrw6pq4lcnfnf5ak4pdmcv3cr7p1jhmk304g5ywxpbd2fdfp9"; depends=[CODEX data_table dplyr fields ggplot2 rlang tidyr truncnorm]; }; + iBMQ = derive2 { name="iBMQ"; version="1.21.1"; sha256="11bkzp25bv5j4x2xanj5cq173pwhl1av5l7kb94vhw80yhbk9l4r"; depends=[Biobase ggplot2]; }; + iCARE = derive2 { name="iCARE"; version="1.9.7"; sha256="0bbzn5yx2i7ijfvsglzsi3f7rv6c0043qvv46n859bpq83pgng5p"; depends=[gtools Hmisc plotrix]; }; + iCNV = derive2 { name="iCNV"; version="1.1.1"; sha256="0rwr2di8215fxjv0wz75ipwdipyxr043yv72m0c03iwq5rccglxd"; depends=[CODEX data_table dplyr fields ggplot2 rlang tidyr truncnorm]; }; iCOBRA = derive2 { name="iCOBRA"; version="1.9.1"; sha256="08nzcsph0w5zp6l2lwrg2624gsgs939rkv1662ic72jf8759i4s1"; depends=[dplyr DT ggplot2 limma reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; }; iCheck = derive2 { name="iCheck"; version="1.11.0"; sha256="0bs9zzcc1pbdvvzq912yqr2waic72jj4pv6ksqjg6s9wz390a4gc"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; }; - iChip = derive2 { name="iChip"; version="1.35.0"; sha256="0c610x3g5nkpwsrkix66s3z8dc24dv11dfidms757hc0fwchnsq3"; depends=[limma]; }; - iClusterPlus = derive2 { name="iClusterPlus"; version="1.17.0"; sha256="1ax42hac2wqkyawm9dwwzm0lf81cihric78j38v1vjic918l1b14"; depends=[]; }; - iGC = derive2 { name="iGC"; version="1.11.0"; sha256="1bcbf1azdb4svdjz8yaxs55l76g5c8i1h53s66qjhss8i3pjydr3"; depends=[data_table plyr]; }; - iPAC = derive2 { name="iPAC"; version="1.25.0"; sha256="1mdcr7fa2y78cnndsd8y08hrmlzbgbsgmhq0kzpszr79xj49kdzx"; depends=[Biostrings gdata multtest scatterplot3d]; }; - iSEE = derive2 { name="iSEE"; version="1.1.2"; sha256="0x8pmyzpbb1x33ixh1jnpfs58l7b1d12r51gk7gjqxa291phg7zk"; depends=[AnnotationDbi BiocGenerics colourpicker cowplot dplyr DT ggplot2 igraph mgcv rentrez reshape2 rintrojs S4Vectors scales shiny shinyAce shinydashboard shinyjs SingleCellExperiment SummarizedExperiment vipor viridisLite]; }; - iSeq = derive2 { name="iSeq"; version="1.33.0"; sha256="1sxy4hxpds6k1flmspwf9y4j8wkr96142z64scigg9mf3p88h5zz"; depends=[]; }; + iChip = derive2 { name="iChip"; version="1.35.1"; sha256="0yaf4q92fjdw80v3ln596f7088wlp7nmwhdxgnbkj0x4kwa9mr2b"; depends=[limma]; }; + iClusterPlus = derive2 { name="iClusterPlus"; version="1.17.2"; sha256="1da6hn0hysmbsd3mma9aq3qh2bj15hdc83p3lj0725c52xi6f2kx"; depends=[]; }; + iGC = derive2 { name="iGC"; version="1.11.1"; sha256="02j3bfv5r8cjjp2k7d3w9y80gvygslcgawmhvzp70chjr12a5nds"; depends=[data_table plyr]; }; + iPAC = derive2 { name="iPAC"; version="1.25.2"; sha256="15jvpz8qmmlcvarnxidmw2x3hn98ngwf2pxa6a8a0rl8qhgis3wb"; depends=[Biostrings gdata multtest scatterplot3d]; }; + iSEE = derive2 { name="iSEE"; version="1.1.14"; sha256="057shg5ayy1c2xss12jknnfj9riavnd50nv6l39bfbxymmn5gwp1"; depends=[AnnotationDbi BiocGenerics colourpicker cowplot dplyr DT ggplot2 igraph mgcv rentrez reshape2 rintrojs S4Vectors scales shiny shinyAce shinydashboard shinyjs SingleCellExperiment SummarizedExperiment vipor viridisLite]; }; + iSeq = derive2 { name="iSeq"; version="1.33.1"; sha256="1cw7fmzd0v6rdrqqkaxx0g5fz763sfwf4kyafmvw00chs4rzi21n"; depends=[]; }; iasva = derive2 { name="iasva"; version="0.99.3"; sha256="1ax0594b3d2glam0lb4dzqzx8bbfdln0wglr96szjdxa6qi31ghk"; depends=[BiocParallel cluster irlba SummarizedExperiment]; }; ibh = derive2 { name="ibh"; version="1.29.0"; sha256="07954bdkijs41r0h39fhlzpd8d75vhlk8gl4zlbaky93prsmi1hf"; depends=[simpIntLists]; }; icetea = derive2 { name="icetea"; version="0.99.10"; sha256="14yzjsydnv2k8x183l7a94jmxsd27p2ndwzdvkd93d5nkh5iq36l"; depends=[BiocGenerics BiocParallel Biostrings csaw edgeR GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges limma Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm6_ensGene VariantAnnotation]; }; - ideal = derive2 { name="ideal"; version="1.5.0"; sha256="1pdj0r0qfjwrwvsb4lrwl3mxd6wb4bwmabd9z413868453qk101p"; depends=[AnnotationDbi BiocParallel d3heatmap DESeq2 dplyr DT GenomicRanges ggplot2 GO_db goseq GOstats gplots IHW IRanges knitr limma pcaExplorer pheatmap plyr rentrez rintrojs rmarkdown S4Vectors shiny shinyAce shinyBS shinydashboard stringr SummarizedExperiment topGO UpSetR]; }; + ideal = derive2 { name="ideal"; version="1.5.6"; sha256="1k2h2nn0s6pmy5m2l3c6nri11am49c4s2js1q6iywbhmlcxk5dh5"; depends=[AnnotationDbi BiocParallel d3heatmap DESeq2 dplyr DT GenomicRanges ggplot2 GO_db goseq GOstats gplots IHW IRanges knitr limma pcaExplorer pheatmap rentrez rintrojs rmarkdown S4Vectors shiny shinyAce shinyBS shinydashboard stringr SummarizedExperiment topGO UpSetR]; }; idiogram = derive2 { name="idiogram"; version="1.57.0"; sha256="0nsldgh780amhdafafrkp1lzriwskm3l89fkn2licxvpw63rlajn"; depends=[annotate Biobase plotrix]; }; - igvR = derive2 { name="igvR"; version="1.1.6"; sha256="12jl0yj6pgjfvrx3rv63nj88zdvakzrh499gx4kz1m5s8wqxswdi"; depends=[BiocGenerics BrowserViz GenomicRanges httpuv rtracklayer VariantAnnotation]; }; - illuminaio = derive2 { name="illuminaio"; version="0.23.0"; sha256="00qf9qjinyqd16r3zv99cgkwxdy44f2i6q2hlhmic7942j6h6r55"; depends=[base64]; }; + igvR = derive2 { name="igvR"; version="1.1.17"; sha256="1hqd65n1qkdf54jqghj9jxcbi6sl918ymarwbrgrfrm6dk1mxzsn"; depends=[BiocGenerics BrowserViz GenomicRanges httpuv rtracklayer VariantAnnotation]; }; + illuminaio = derive2 { name="illuminaio"; version="0.23.2"; sha256="05m18f0ipc89lak30rdlg1b1aafsgjsjzbr6scn18168m12qkd5i"; depends=[base64]; }; imageHTS = derive2 { name="imageHTS"; version="1.31.0"; sha256="0d7l8w5i0nlfks1iak0qdkxrarfx280wyqbpig38bhbmzkv31xrg"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; }; - immunoClust = derive2 { name="immunoClust"; version="1.13.0"; sha256="0z17f415rqad4hmwhxgl1gh8a1r42v5yz38rpq9yhssq7w1mw8q0"; depends=[flowCore lattice]; }; + immunoClust = derive2 { name="immunoClust"; version="1.13.4"; sha256="04wjiyqp4fcbgyllpqrandvl20cjayymyi35gs3cdg9g2dwci3aq"; depends=[flowCore lattice]; }; impute = derive2 { name="impute"; version="1.55.0"; sha256="1nb2zpnx9ia2br0044jky4kcqj2vw1vw35s34869i35n90n3vqqc"; depends=[]; }; - intansv = derive2 { name="intansv"; version="1.21.0"; sha256="0a2qrnw1jd5d7mqvmin54110xvn1089p16bfi14660qzip6cwb0i"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; }; - interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.19.0"; sha256="1iwv231mc6g2jp6l6b3rs0gm5n1pb7mbah522q3d4s563avs9g0d"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; }; - interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.19.0"; sha256="0jwsm5i5s6gkxb05n8fmsybyvi5829g6i6y39nxcpd189ihbmv16"; depends=[BiocGenerics shiny]; }; - inveRsion = derive2 { name="inveRsion"; version="1.29.0"; sha256="12pzk7ppd48ccmfr3q2950pfckcc2kfvgnailwai7jxgss1h1148"; depends=[haplo_stats]; }; - isobar = derive2 { name="isobar"; version="1.27.0"; sha256="02aa78jia246w729bg4pl54shjwp51yymskhy842xnznw01nd8p7"; depends=[Biobase biomaRt distr ggplot2 plyr]; }; - isomiRs = derive2 { name="isomiRs"; version="1.9.1"; sha256="1k60zgb2b2yqwzb02nwvri10p1a2qdlgm4g0wg6593fmkr1q9p8h"; depends=[AnnotationDbi assertive_sets Biobase BiocGenerics cluster DESeq2 DiscriMiner dplyr GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges limma RColorBrewer readr reshape rlang S4Vectors SummarizedExperiment tibble tidyr]; }; - iterClust = derive2 { name="iterClust"; version="1.3.0"; sha256="1bm2ld3w6sm1jn7s0yk9v7d53xmf2ix411p7pp2fyjqfj6vl3iz4"; depends=[Biobase cluster]; }; + intansv = derive2 { name="intansv"; version="1.21.3"; sha256="0aqq5mc63s5gyz82wp37m0y3b7rkv2rxxkfld0jw6dn3fp6dapqp"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; }; + interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.19.3"; sha256="1lmc0x0gfi8jhzl3z8pmkbqmx56xn6fim0ydsrqcaygz25gif6fp"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; }; + interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.19.2"; sha256="02b3sps2irfb83zii5c0zxzjp2138xfr2jfdhwvh4h6wzqn2a21q"; depends=[BiocGenerics shiny]; }; + inveRsion = derive2 { name="inveRsion"; version="1.29.1"; sha256="0bwr76l30sxzdfjjsf7py4i78diwazfjkf237yx8n4kzb0jlkilp"; depends=[haplo_stats]; }; + ipdDb = derive2 { name="ipdDb"; version="0.99.10"; sha256="1k1giv6jvgy54pa5yqcy0yrmn53x1ggbryg9c7mmpb4dljw7vnrj"; depends=[AnnotationDbi AnnotationHub assertthat Biostrings DBI GenomicRanges IRanges RSQLite]; }; + isobar = derive2 { name="isobar"; version="1.27.1"; sha256="0kznz8h6b8wq1z8xqkhn0k6gmc7wbxdfv3vy19s93njdk7w3gn5d"; depends=[Biobase biomaRt distr ggplot2 plyr]; }; + isomiRs = derive2 { name="isomiRs"; version="1.9.5"; sha256="08xvxpl1x46rs4zh34irypq0bsici3xhh52dzirhr0671p9ihqa6"; depends=[AnnotationDbi assertive_sets Biobase BiocGenerics cluster cowplot DEGreport DESeq2 DiscriMiner dplyr GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges limma RColorBrewer readr reshape rlang S4Vectors SummarizedExperiment tibble tidyr]; }; + iterClust = derive2 { name="iterClust"; version="1.3.2"; sha256="1gkqnpyhispjbzc30dfs1hdv1vq6r33sqkmjnzcil4mbr529gvc3"; depends=[Biobase cluster]; }; iterativeBMA = derive2 { name="iterativeBMA"; version="1.39.0"; sha256="07xy5vjmgzglab6hp82xkd6gc67lb58n8g26zvssldpzm1kir70j"; depends=[Biobase BMA leaps]; }; iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.39.0"; sha256="1cj63g97xm05clix5cv3dmjdwb806rb5va262hfhvmd2aa6bgq2k"; depends=[BMA leaps survival]; }; - iteremoval = derive2 { name="iteremoval"; version="1.1.0"; sha256="0ggmvmif5ak35mjzd000dflcbnp0zx14zspn2nabkak74zvdjsgm"; depends=[GenomicRanges ggplot2 magrittr SummarizedExperiment]; }; + iteremoval = derive2 { name="iteremoval"; version="1.1.1"; sha256="09qdb60ndjljn4wgpgnxcy2yvivlpvzgr6vs04ssjwq9dk8vwc9l"; depends=[GenomicRanges ggplot2 magrittr SummarizedExperiment]; }; ivygapSE = derive2 { name="ivygapSE"; version="1.3.0"; sha256="1730rd55ws484q4iwgd06cps8jfg7f1wzryjr0gzaykxq7n2yi94"; depends=[ggplot2 hwriter plotly S4Vectors shiny SummarizedExperiment survival survminer UpSetR]; }; joda = derive2 { name="joda"; version="1.29.0"; sha256="0n76l7mrkqrsvjq67hp9am3b6ixi2v9vz7hppj36y37r02myhdlb"; depends=[bgmm RBGL]; }; - karyoploteR = derive2 { name="karyoploteR"; version="1.7.1"; sha256="1fvvc8181vasbdky42yijhknm57pypb6abkswl9si91fv2zm4z28"; depends=[bezier biovizBase digest GenomeInfoDb GenomicFeatures GenomicRanges IRanges memoise regioneR Rsamtools rtracklayer S4Vectors]; }; - kebabs = derive2 { name="kebabs"; version="1.15.0"; sha256="061cpbsqd444p3jw08kv72b3q2cbrzd1939vgbbsg98l550684bs"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; }; + karyoploteR = derive2 { name="karyoploteR"; version="1.7.17"; sha256="1ks87kkw12gr4598rpq262axaszk4kppm5dhs4hjhy0gkwlm4lhh"; depends=[bamsignals bezier biovizBase digest GenomeInfoDb GenomicFeatures GenomicRanges IRanges memoise regioneR Rsamtools rtracklayer S4Vectors]; }; + kebabs = derive2 { name="kebabs"; version="1.15.2"; sha256="1d08ad2cbrd77qlgmf3y6frya8g5kn8x9k7paabch1fxpzx4sj2g"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; }; keggorthology = derive2 { name="keggorthology"; version="2.33.0"; sha256="11a1d08pycj99xzhwblgrjwl6idm6l90i0ya1c0q0bwmaiyqqbwp"; depends=[AnnotationDbi DBI graph hgu95av2_db]; }; kimod = derive2 { name="kimod"; version="1.9.0"; sha256="1q2ndbpw13c9a6g5vs29w5zzrw3ac5y5rjnndw660xljfphid6x4"; depends=[Biobase cluster]; }; - kissDE = derive2 { name="kissDE"; version="1.1.0"; sha256="0k5jw601sygbvvqysha243mbhwqv80c6k8dmbj9mdqpkd0bxw6aw"; depends=[aod Biobase DESeq2 DSS ggplot2 glmnet gplots matrixStats R_utils]; }; - kmknn = derive2 { name="kmknn"; version="0.99.13"; sha256="1qdsm0y1saz594s2bijqwfg74yjds1s55mzsw26sw11rvk63x1z6"; depends=[BiocParallel DelayedArray Rcpp]; }; + kissDE = derive2 { name="kissDE"; version="1.1.3"; sha256="0gm63ixcr3gfg64bg253n9vp1gasmdg3xpb4i27gq7njsx7hs6bw"; depends=[aod Biobase DESeq2 doParallel DSS foreach ggplot2 gplots matrixStats]; }; + kmknn = derive2 { name="kmknn"; version="0.99.16"; sha256="14gvgdz4gvpv5bvr3l7rbn356cqvg3nqq7vcavgyd7bqsvk6mmg3"; depends=[BiocParallel DelayedArray Rcpp]; }; lapmix = derive2 { name="lapmix"; version="1.47.0"; sha256="08qj6i6y42ax82j29maf89zs0k03iv6p30v1zlvgixfh1p86ffk4"; depends=[Biobase]; }; ldblock = derive2 { name="ldblock"; version="1.11.1"; sha256="0z53xkh2khlfsnvr0nqsw8k6s375ba2y5a3njbr9qnif3r0846km"; depends=[BiocGenerics erma GenomeInfoDb GenomicFiles GO_db Homo_sapiens Matrix Rsamtools snpStats VariantAnnotation]; }; les = derive2 { name="les"; version="1.31.0"; sha256="11ad0v5j31s8kcg4572ga4znnpx9ry83m994bqbk3h51cb48pzm8"; depends=[boot fdrtool gplots RColorBrewer]; }; + levi = derive2 { name="levi"; version="0.99.13"; sha256="0n1sl3l7xdp346jz5s6xgfmdy0i71k05khkjygkp0yqnlnapd48z"; depends=[colorspace dplyr DT ggplot2 httr igraph knitr RColorBrewer Rcpp reshape2 shiny shinydashboard shinyjs testthat xml2]; }; lfa = derive2 { name="lfa"; version="1.11.0"; sha256="1vww3lfzb3kx2hp1cm48vg1rmnazgklz1qz1y36yydg53lbl8igi"; depends=[corpcor]; }; - limma = derive2 { name="limma"; version="3.37.2"; sha256="1wf9xpp8l43ld7mkinqznd2dxlpw4w9vgd8y8zg9nz7gp5h0b148"; depends=[]; }; + limma = derive2 { name="limma"; version="3.37.10"; sha256="16jdx417iahrvai0p32qaf6cgknb2pc7bjas5ba4brd2p255sn8i"; depends=[]; }; + limmaGUI = derive2 { name="limmaGUI"; version="1.57.1"; sha256="09dykl3gd231j0xi45j23mv0p9vk0xdhyjls1z5026vclnv6037s"; depends=[limma R2HTML tkrplot xtable]; }; lmdme = derive2 { name="lmdme"; version="1.23.0"; sha256="0192ffh3qmqx31d67zxr8sg7qvwd4wmcgzxq44w9sflb947sn8ds"; depends=[limma pls stemHypoxia]; }; - loci2path = derive2 { name="loci2path"; version="1.1.0"; sha256="0lqixyyv6wrmqbfl67yy131421pmyi6hp7hn11lbf3xm8q56smah"; depends=[BiocParallel data_table GenomicRanges pheatmap RColorBrewer S4Vectors wordcloud]; }; - logicFS = derive2 { name="logicFS"; version="1.51.0"; sha256="1bijly35nfy6ix6b0h2salriy143xyc3l591hcngvif504zjd57b"; depends=[LogicReg mcbiopi]; }; + loci2path = derive2 { name="loci2path"; version="1.1.1"; sha256="1mgnx1dji2dc3jd9biv4bs5f8sgpkxzk6mwsfivfbjll9m7hprb7"; depends=[BiocParallel data_table GenomicRanges pheatmap RColorBrewer S4Vectors wordcloud]; }; + logicFS = derive2 { name="logicFS"; version="2.1.18"; sha256="14jdnjlgsgbciahljmp8wb5zn3dbqy2r3pywbn2iqqx628hl0li6"; depends=[LogicReg mcbiopi survival]; }; logitT = derive2 { name="logitT"; version="1.39.0"; sha256="0ynd7h26ask2i15cxikx9igcm9cdmmihg561l1dv3m9zw84s6mvb"; depends=[affy]; }; lol = derive2 { name="lol"; version="1.29.0"; sha256="050i433xkj365q7k5i7gw07z8li29myd3zgavjg14p9lkdcwia0w"; depends=[Matrix penalized]; }; lpNet = derive2 { name="lpNet"; version="2.13.0"; sha256="1k94rsji8p9ri8mvs6xc23dm4fq4pxcd9323c6jllq9bdljxffkp"; depends=[lpSolve nem]; }; @@ -1163,208 +1243,217 @@ in with self; { maPredictDSC = derive2 { name="maPredictDSC"; version="1.19.0"; sha256="1hn35cgd9571b5vz3wv76lhg2hr77kl1s6r6nmpnjph4asqhj7yg"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; }; maSigPro = derive2 { name="maSigPro"; version="1.53.0"; sha256="0gf80ff0jhag6mj6r888ivla5fccrdg63d7wh1g322ygp5b27h4s"; depends=[Biobase MASS mclust venn]; }; maanova = derive2 { name="maanova"; version="1.51.0"; sha256="0az1jxfmjjpz3aqb5hvxpw912rh188b6gf02jj3q4v294131rqw4"; depends=[Biobase]; }; - macat = derive2 { name="macat"; version="1.55.0"; sha256="1bmalm7v6hxab5vcqqq6s3s2313xq0pifk7yxq20kh7n8m7n64iw"; depends=[annotate Biobase]; }; - made4 = derive2 { name="made4"; version="1.55.0"; sha256="0pywxxcxbi3wihx7v67rcgk7clzwkc0611687rq764xlkwljaxfw"; depends=[ade4 gplots RColorBrewer scatterplot3d]; }; - maftools = derive2 { name="maftools"; version="1.7.05"; sha256="070w04yq3khxl3pnd96cw8kxfv1j7iwwqwpc618pnarr7ii734mz"; depends=[Biostrings changepoint cometExactTest ComplexHeatmap cowplot data_table ggplot2 ggrepel gridExtra mclust NMF RColorBrewer rjson Rsamtools survival VariantAnnotation wordcloud]; }; + macat = derive2 { name="macat"; version="1.55.3"; sha256="0ywngyddagavml8fyr3m2g9aic1bvy49r3mw8kbx1gy4mcqp0q9a"; depends=[annotate Biobase]; }; + made4 = derive2 { name="made4"; version="1.55.2"; sha256="16r6dsg0ayj26xmblzlwmp93jhw8j1b7cv2z372id2cy1girfdxs"; depends=[ade4 gplots RColorBrewer scatterplot3d]; }; + maftools = derive2 { name="maftools"; version="1.7.51"; sha256="1gvnbcyipjl13yj6yix693d6wibkamwqnmh2zds31hlbj0m2f09a"; depends=[Biostrings BSgenome cometExactTest ComplexHeatmap cowplot data_table ggplot2 ggrepel gridExtra mclust NMF RColorBrewer rjson survival wordcloud]; }; maigesPack = derive2 { name="maigesPack"; version="1.45.0"; sha256="04ihpaqpkimf5k2j8hf2zwjqm6s75nkr1bn8gsvg21m88gajsh3x"; depends=[convert graph limma marray]; }; makecdfenv = derive2 { name="makecdfenv"; version="1.57.0"; sha256="1v9a3r9gxijglxyhjb52jqm6p9vqkn549cim9zbw6mhngn2cqnzs"; depends=[affy affyio Biobase zlibbioc]; }; - manta = derive2 { name="manta"; version="1.27.0"; sha256="0p3r0l0sgnf9rrih35a3n7c6l9a3q9xpd2hilmf3pbrrc5hrxnhm"; depends=[caroline edgeR Hmisc]; }; - mapscape = derive2 { name="mapscape"; version="1.5.0"; sha256="0fs1cn7aw2awgjqmjjb70p5pz6fdnwfvix57wijvalc5qy777h1a"; depends=[base64enc htmlwidgets jsonlite stringr]; }; + manta = derive2 { name="manta"; version="1.27.2"; sha256="15hqw96xpprmq38f0gq50ik6ynqk6k51fp3gxcsy1qbpk9kp89jx"; depends=[caroline edgeR Hmisc]; }; + mapscape = derive2 { name="mapscape"; version="1.5.1"; sha256="1aqxpwz9a87y5kfxnz98axzc7q7d59qkw61jnj5sq9qv2s565q5v"; depends=[base64enc htmlwidgets jsonlite stringr]; }; marray = derive2 { name="marray"; version="1.59.0"; sha256="01kgc79bhg5yg1zkglkpm85zrhm3dl5j63hvxbll3xsrrmy4bhs9"; depends=[limma]; }; martini = derive2 { name="martini"; version="1.1.0"; sha256="1aj39flz18cnl9042hqlnqzyq6ff9j4dl5b2fm29y150s0j2wz5p"; depends=[igraph Matrix Rcpp RcppEigen Rgin S4Vectors snpStats]; }; - maser = derive2 { name="maser"; version="0.99.15"; sha256="12i7yzv4id25186ny5j4bzjlg6jwrk0mwisnpaakvk9fwja4ygl5"; depends=[BiocGenerics data_table dplyr DT GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges reshape2 rtracklayer]; }; + maser = derive2 { name="maser"; version="0.99.16"; sha256="12dchpcxjj3bc4qz0viqxg20c1yv42830l8jc38k3nx90iafs93g"; depends=[BiocGenerics data_table dplyr DT GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges reshape2 rtracklayer]; }; maskBAD = derive2 { name="maskBAD"; version="1.25.0"; sha256="09g28yd1jwxrvqh59lbcnni8ba1kk0gkgcxb2x7s9m35nx8sdr04"; depends=[affy gcrma]; }; massiR = derive2 { name="massiR"; version="1.17.0"; sha256="0gf0j965ssrawvyx4i3mq5xrwbjy73vplig3d5518425l38g3ajp"; depends=[Biobase cluster diptest gplots]; }; - matchBox = derive2 { name="matchBox"; version="1.23.0"; sha256="0gkn4jx9fhpgdrbcqvq6yjy3yyh1fsxw7gq9izcy2mkyp9z2343i"; depends=[]; }; - matter = derive2 { name="matter"; version="1.7.1"; sha256="0vjabjvh3gcxlvjbyncvj6jngwg701h9kr9w334rz1f4l9szkvrl"; depends=[biglm BiocGenerics digest irlba]; }; + matchBox = derive2 { name="matchBox"; version="1.23.1"; sha256="134bv5pplxb2vg75wwb6x7b0mi5qscidrz9xpnf3wfk446mvpzyd"; depends=[]; }; + matter = derive2 { name="matter"; version="1.7.6"; sha256="029qb75k8ps0d979wrvv99666dn6513mhk26x7s0ahj5b75iyymk"; depends=[biglm BiocGenerics digest irlba]; }; mcaGUI = derive2 { name="mcaGUI"; version="1.29.1"; sha256="0klxp5g2s7c6k93imdkc9dxvzzvb89d5jf7x7p7v0mmsm6rbhg95"; depends=[bpca foreign gWidgets gWidgetsRGtk2 lattice MASS OTUbase proto vegan]; }; mdgsa = derive2 { name="mdgsa"; version="1.13.1"; sha256="06p6dfffc7h80wzsypq1xk80q1ilzqpjxrwmvi70sdqv9fc9ac17"; depends=[AnnotationDbi cluster DBI GO_db KEGG_db Matrix]; }; mdp = derive2 { name="mdp"; version="1.1.0"; sha256="0a5r860nywkd35h16vsgqqj0iin0ldbra0b8cs1ql2bwmdjccl7i"; depends=[ggplot2]; }; mdqc = derive2 { name="mdqc"; version="1.43.0"; sha256="1h0pk6amx5vj9zxxwa3aydhnph0cn2qcibz7xk5whpr3fqrzk1b4"; depends=[cluster MASS]; }; - meshes = derive2 { name="meshes"; version="1.7.1"; sha256="1ccbl1gnsapb5r60d2bdfgrj2fmn1glk5yxjxjlv68r9xkv0nfk8"; depends=[AnnotationDbi DOSE enrichplot GOSemSim MeSH_db rvcheck]; }; - meshr = derive2 { name="meshr"; version="1.17.0"; sha256="03q7ihrg2a61kw3nkb13jn2fj3mv0p9g6pas5dm62z5i0yfgqypz"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db S4Vectors]; }; + meshes = derive2 { name="meshes"; version="1.7.2"; sha256="03zhlaz7z6z6z9k4c0apqa871g1z5597szk7zq9vsdp210bbws7y"; depends=[AnnotationDbi DOSE enrichplot GOSemSim MeSH_db rvcheck]; }; + meshr = derive2 { name="meshr"; version="1.17.2"; sha256="07y38icgvdncfqw4n4dmigwgl4dwwxmxypwi2rzd586m1wb3diy6"; depends=[BiocGenerics Category cummeRbund fdrtool MeSH_Aca_eg_db MeSH_AOR_db MeSH_Bsu_168_eg_db MeSH_db MeSH_Hsa_eg_db MeSH_PCR_db MeSH_Syn_eg_db MeSHDbi org_Hs_eg_db RSQLite S4Vectors]; }; messina = derive2 { name="messina"; version="1.17.0"; sha256="0zllyp3azgv0yyx0hdcad1bv41shqvkyw143nb7nc79x34zgm11m"; depends=[foreach ggplot2 plyr Rcpp survival]; }; metaArray = derive2 { name="metaArray"; version="1.59.0"; sha256="0xp7qnvgj9qa83lwv6dcbs3fw41jyp1lsw17n87jr9x2gnz9v2ly"; depends=[Biobase MergeMaid]; }; metaCCA = derive2 { name="metaCCA"; version="1.9.0"; sha256="1i8qgq7qxngkrgibwqh8c6yigpi5w7bf1jivpmkk1swzlsa620y8"; depends=[]; }; metaMS = derive2 { name="metaMS"; version="1.17.0"; sha256="194pw7fbf9nr0wxq7fbg4j45lh36va6ypr62aj8zc6l2hh42d2b5"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; }; metaSeq = derive2 { name="metaSeq"; version="1.21.0"; sha256="0fcwfk0vz0pa5pykxlf4g8zg5iyd40qncq40kh8zydymkkz7njqg"; depends=[NOISeq Rcpp snow]; }; metabomxtr = derive2 { name="metabomxtr"; version="1.15.0"; sha256="09mx5a26maf4zm670r17xs9bfyn7xz6hhyjh9bbbkm4lf0fyph22"; depends=[Biobase BiocParallel Formula ggplot2 multtest optimx plyr]; }; - metagene = derive2 { name="metagene"; version="2.13.1"; sha256="0lyv5mm5bvvj2v3519swvwwsgmma952ccy8rxnpzr628lrvllcw9"; depends=[BiocParallel data_table DBChIP EnsDb_Hsapiens_v86 ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges magrittr matrixStats muStat purrr R6 Rsamtools rtracklayer stringr]; }; + metagene = derive2 { name="metagene"; version="2.13.3"; sha256="19g9nh13b8wr4kbpr57vhnm2237zzx2iv4pvsvabsswr9ls09pfl"; depends=[BiocParallel data_table DBChIP EnsDb_Hsapiens_v86 ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges magrittr matrixStats muStat purrr R6 Rsamtools rtracklayer stringr]; }; metagenomeFeatures = derive2 { name="metagenomeFeatures"; version="2.1.0"; sha256="1dbw7cvyrh4w8cjqdvslph3lbrxxyxnpc71l69myasf4w1hwwsjb"; depends=[ape Biobase Biostrings dbplyr DECIPHER dplyr lattice lazyeval magrittr purrr RSQLite S4Vectors stringr]; }; - metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.23.0"; sha256="09bfw6g9k4mimnlcrqf5690gpwn5f02pcairnnrmkx5kx7smj4zw"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer]; }; + metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.23.1"; sha256="141hm3dbbcpjy743gwcn0ajvkb6af4g4cxqq7lads1zxhfpl6fq4"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer]; }; metahdep = derive2 { name="metahdep"; version="1.39.0"; sha256="1zm6j0i9myn4q4lwc2almy6d6khg1kqb8ij11cr5dhxmwx444ma8"; depends=[]; }; - metaseqR = derive2 { name="metaseqR"; version="1.21.0"; sha256="1ny7srzlw1gv0bf4zflji0k48s6mw6cl2141y5l6wxwyiljgxvdp"; depends=[baySeq biomaRt brew corrplot DESeq EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; }; + metaseqR = derive2 { name="metaseqR"; version="1.21.2"; sha256="1vyjn9v0z3wx69ncqp2gzswwz6b47aarqf3dk1hpzwhrr30sqli8"; depends=[baySeq biomaRt brew corrplot DESeq EDASeq edgeR gplots limma log4r NBPSeq NOISeq qvalue rjson vsn]; }; metavizr = derive2 { name="metavizr"; version="1.5.1"; sha256="1wvdzqvjlr2ygxkq2pvkfw5xdr09yafmalf4k5ya7mc70cg6w7nb"; depends=[Biobase data_table digest epivizr epivizrData epivizrServer epivizrStandalone GenomeInfoDb httr metagenomeSeq phyloseq vegan]; }; - methInheritSim = derive2 { name="methInheritSim"; version="1.3.0"; sha256="180lha5avnrlnkc709hy5akmajwpkzb2slk7gf7641349lx3890v"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges methylKit msm S4Vectors]; }; + methInheritSim = derive2 { name="methInheritSim"; version="1.3.1"; sha256="0grqjwv75yd0v3ji99cwnbbgp6s488kyh5d3kan1x88wqy6p00cw"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges methylKit msm S4Vectors]; }; methVisual = derive2 { name="methVisual"; version="1.33.0"; sha256="0pyj09zkan51w6w0wnkg3ww49hlwqarl5sfw7wrbarfdvxvlyqpa"; depends=[Biostrings ca gridBase gsubfn IRanges plotrix sqldf]; }; - methimpute = derive2 { name="methimpute"; version="1.3.1"; sha256="09v7dw2sdkzrypw9brqyym9ipmplww2r3jh5fybw66zj2fiqxhx6"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges ggplot2 IRanges minpack_lm Rcpp reshape2]; }; + methimpute = derive2 { name="methimpute"; version="1.3.2"; sha256="1nd5ay6ymf0hchv1q62qpj3by4h7c83x59b8d72w1hrv5xcgqhi6"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges ggplot2 IRanges minpack_lm Rcpp reshape2]; }; methyAnalysis = derive2 { name="methyAnalysis"; version="1.23.0"; sha256="1fhhk2yqcq2rh30369izn32w7jzcyzhlwaa5wcds4mb2caiyr4kj"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges genoset Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; }; - methylInheritance = derive2 { name="methylInheritance"; version="1.5.0"; sha256="1bf765bvv63xp3fxxf9rx0x5z8x4sk1xfwm67nm10shsd4wbh0za"; depends=[BiocParallel GenomicRanges ggplot2 gridExtra IRanges methylKit rebus S4Vectors]; }; - methylKit = derive2 { name="methylKit"; version="1.7.4"; sha256="1mi3w3b60k1nnrp7g2dv4b561y9ws493n5v0s8gwz4w7m12xb2qx"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; }; - methylMnM = derive2 { name="methylMnM"; version="1.19.0"; sha256="1rzx8sd1kg4krzjqbnv0fi89lgc12xjdzlkbc8dpj8mx8d6gp8xg"; depends=[edgeR statmod]; }; + methylGSA = derive2 { name="methylGSA"; version="0.99.16"; sha256="1jxwys6dlhqs8fq9f8vw63d5llzcbvyyczw2qgi94qwispb5s5bi"; depends=[AnnotationDbi clusterProfiler ggplot2 GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b2_hg19 missMethyl org_Hs_eg_db reactome_db RobustRankAggreg stringr]; }; + methylInheritance = derive2 { name="methylInheritance"; version="1.5.2"; sha256="0vvwzxabm5xz94zfvi1yjw43d8asmv7wmcngjx571qphcl1hlyab"; depends=[BiocParallel GenomicRanges ggplot2 gridExtra IRanges methylKit rebus S4Vectors]; }; + methylKit = derive2 { name="methylKit"; version="1.7.10"; sha256="1m8cb5w8rhcnsdh01ahcr16hnjpvzb77albxlbqcprhndvd7cxgh"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; }; + methylMnM = derive2 { name="methylMnM"; version="1.19.1"; sha256="1h0ydwljbrdyb5vn688303zp61np5a0zaah974g6v8mgs4izdqvk"; depends=[edgeR statmod]; }; methylPipe = derive2 { name="methylPipe"; version="1.15.0"; sha256="0v00cc5jiw0n6nxq5nvbmaknbanp0gbzk8d3p5igfj3pva6zvpjy"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; }; methylumi = derive2 { name="methylumi"; version="2.27.0"; sha256="1carjnp9fbldzyms0cnc5lv92y4cxgzri9wxd5m4svrdfagnj75z"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; }; - methyvim = derive2 { name="methyvim"; version="1.3.0"; sha256="1w8jm4qba2cqi1ghrk0lmwhmdh6hn9fdbzh8f3gf7hlbbg5wf678"; depends=[BiocGenerics BiocParallel bumphunter cluster doFuture dplyr future GenomeInfoDb ggplot2 ggsci gridExtra gtools IRanges limma minfi SummarizedExperiment superheat tmle]; }; - mfa = derive2 { name="mfa"; version="1.3.0"; sha256="14qb1l4czylj2jid2fqk24pqkg2rgv4fs2d719xmd8yd9snhda7r"; depends=[Biobase coda dplyr ggmcmc ggplot2 magrittr MCMCglmm MCMCpack Rcpp tibble]; }; + methyvim = derive2 { name="methyvim"; version="1.3.1"; sha256="1jycwzqf7147pcdfais5n876x9w61xsr41jq2kgqhnmxz05rhwkb"; depends=[BiocGenerics BiocParallel bumphunter cluster doFuture dplyr future GenomeInfoDb ggplot2 ggsci gridExtra gtools IRanges limma minfi S4Vectors SummarizedExperiment superheat tmle]; }; + mfa = derive2 { name="mfa"; version="1.3.1"; sha256="1nn35lxbq6dqsgc21pkbl7x803v385n360wnjv1qxjs9b8w8xqjk"; depends=[Biobase coda dplyr ggmcmc ggplot2 magrittr MCMCglmm MCMCpack Rcpp tibble]; }; mgsa = derive2 { name="mgsa"; version="1.29.0"; sha256="1vhp23qx5vzaqmn06vngfd9c3y5ygizc6hhx1ccv7m5x4lz2a4jg"; depends=[gplots]; }; - miRBaseConverter = derive2 { name="miRBaseConverter"; version="1.5.0"; sha256="0gj23y3sk269j0zci53f9b3mdqvdnk84awg80zxv5s25wjzsvwwf"; depends=[]; }; - miRLAB = derive2 { name="miRLAB"; version="1.11.0"; sha256="12xyplcm923lhwpjxwy8a9xfn6mrhpcf264kyckzswmxzvnqy3n8"; depends=[energy entropy glmnet gplots Hmisc httr impute limma pcalg RCurl Roleswitch stringr]; }; + miRBaseConverter = derive2 { name="miRBaseConverter"; version="1.5.6"; sha256="0r6cgvslm1lsg1mhrxzdghglk55zh7f3n1lhk136hk5nqh58nhk9"; depends=[]; }; + miRLAB = derive2 { name="miRLAB"; version="1.11.1"; sha256="18bqx7gxx3hs9mfvgidnngf57grlxnapq8axp2cyhvbvspwaabb6"; depends=[Category ctc dplyr energy entropy glmnet GOstats gplots heatmap_plus Hmisc httr impute InvariantCausalPrediction limma org_Hs_eg_db pcalg RCurl Roleswitch stringr SummarizedExperiment TCGAbiolinks]; }; miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.9.0"; sha256="116zkdwspzb0rp6yhz9bjfarbi2mvvlngsb53zs1js59kzsrw06a"; depends=[AnnotationDbi DBI miRBaseVersions_db reshape2]; }; miRNApath = derive2 { name="miRNApath"; version="1.41.0"; sha256="1hndq9aq3r3mci5j9ysfkb8kdw2zp7bbi3j7qfcdchm9q3g78rya"; depends=[]; }; - miRNAtap = derive2 { name="miRNAtap"; version="1.15.0"; sha256="03i5bbjygkas379kp6frf68d4f7md3safbkayqiccdaq1vszah08"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; }; - miRcomp = derive2 { name="miRcomp"; version="1.11.0"; sha256="08b4na83sdp3q6hcadbyc59jmd151vwg26prjvxvsmacqajlf2xc"; depends=[Biobase KernSmooth miRcompData]; }; + miRNAtap = derive2 { name="miRNAtap"; version="1.15.1"; sha256="030kl4i7m1apxb4r3r3p2fbq2429zcm2aja96vdr6x2vmrna3nr5"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; }; + miRSM = derive2 { name="miRSM"; version="0.99.28"; sha256="04liw858ihv2ljg4w14gj0mrkfrsycnfg0k0pp041pz158d4wn78"; depends=[BiBitR BicARE biclust Biobase dynamicTreeCut fabia flashClust GFA GSEABase iBBiG igraph isa2 linkcomm MCL miRsponge NMF PMA Rcpp rqubic runibic s4vd SummarizedExperiment WGCNA]; }; + miRcomp = derive2 { name="miRcomp"; version="1.11.1"; sha256="1am0pxrdp297z12wbg1nlf7lbc37d9v01nb6hp4zw5gdkf3rfagd"; depends=[Biobase KernSmooth miRcompData]; }; miRmine = derive2 { name="miRmine"; version="1.3.0"; sha256="10j2f6ldxxf78aps1ygvdzpvga5smb4xv9m4mhgbhl9qfbkqvkd1"; depends=[SummarizedExperiment]; }; - miRsponge = derive2 { name="miRsponge"; version="1.7.0"; sha256="1w61pnjzp6g7p6sz6y88h6zdifmqdijr89y25rqrgk6ybz50206j"; depends=[clusterProfiler corpcor DOSE igraph linkcomm ProNet ReactomePA survival varhandle]; }; + miRsponge = derive2 { name="miRsponge"; version="1.7.6"; sha256="1isl9mi8bqwxxsm1miv7bh0xahsg3lb22q0lyj35ij0bhkdr1sw7"; depends=[clusterProfiler corpcor DOSE igraph linkcomm MCL Rcpp ReactomePA survival varhandle]; }; microRNA = derive2 { name="microRNA"; version="1.39.0"; sha256="0c1dvhp81kxv1kxr77rl7wgq5wr92gj37m8qsgn0b40zs5b1b49i"; depends=[Biostrings]; }; - microbiome = derive2 { name="microbiome"; version="1.3.1"; sha256="0vwx4m4w26lrs5n30ikc5h38bcbpi5ynfiqm8kbnqmldzsfcq56q"; depends=[dplyr ggplot2 phyloseq reshape2 tidyr vegan]; }; - mimager = derive2 { name="mimager"; version="1.5.0"; sha256="1jl3j7l75g04a7w2cf7kgci78b2q68wadpbq8hcg91qrr1jahw89"; depends=[affy affyPLM Biobase BiocGenerics DBI gtable oligo oligoClasses preprocessCore S4Vectors scales]; }; + microbiome = derive2 { name="microbiome"; version="1.3.3"; sha256="17gnyy8qwxjg86i8nx4mpyhrsy8mkmzyhgmxfngkvlyb3cqqvbdl"; depends=[dplyr ggplot2 phyloseq reshape2 tidyr vegan]; }; + mimager = derive2 { name="mimager"; version="1.5.3"; sha256="1zpp71qjws6qm1cdl7s057mgijbsqhahklaq0flc4izvjn7awkrs"; depends=[affy affyPLM Biobase BiocGenerics DBI gtable oligo oligoClasses preprocessCore S4Vectors scales]; }; minet = derive2 { name="minet"; version="3.39.0"; sha256="0lbga3id91swx8vnfcw4vgwq5bypr3a110il3a84kwr9naq9vnvi"; depends=[infotheo]; }; - minfi = derive2 { name="minfi"; version="1.27.5"; sha256="107y7npvk5cdr7nz6ll8whyhc83ni1wl3vsx28wyblh7qwk3fh64"; depends=[beanplot Biobase BiocGenerics BiocParallel Biostrings bumphunter data_table DelayedArray DelayedMatrixStats genefilter GenomeInfoDb GenomicRanges GEOquery HDF5Array illuminaio IRanges lattice limma MASS mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; }; + minfi = derive2 { name="minfi"; version="1.27.8"; sha256="0vizm0alsczrjqryzhl7za6n3gc6dmr3z6h2dihn31fc74z0lqyn"; depends=[beanplot Biobase BiocGenerics BiocParallel Biostrings bumphunter data_table DelayedArray DelayedMatrixStats genefilter GenomeInfoDb GenomicRanges GEOquery HDF5Array illuminaio IRanges lattice limma MASS mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; }; mirIntegrator = derive2 { name="mirIntegrator"; version="1.11.0"; sha256="1f6xi68rgc5xgmcpv25lfz9khdwh94k59a2r2lj81y7h1fg3asck"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; }; - missMethyl = derive2 { name="missMethyl"; version="1.15.0"; sha256="027avacdx9h4b2gj7sv0a1a38iaby0x882zbn25zh4fabgjclffv"; depends=[AnnotationDbi BiasedUrn GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest limma methylumi minfi org_Hs_eg_db ruv statmod stringr]; }; - missRows = derive2 { name="missRows"; version="1.1.0"; sha256="10wj9g5xy3y7zk3n0nnkvppj66zl226bd5cjbkgwicz8kb29n4ld"; depends=[ggplot2 gtools MultiAssayExperiment plyr S4Vectors]; }; + missMethyl = derive2 { name="missMethyl"; version="1.15.5"; sha256="0p2mgq5njh830vhi2najh3slzhqz56fzi947xvrbyz5crqn8aq02"; depends=[AnnotationDbi BiasedUrn GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest limma methylumi minfi org_Hs_eg_db ruv statmod stringr]; }; + missRows = derive2 { name="missRows"; version="1.1.1"; sha256="09s34cd47hylqwi4qmcnba4qmwiz0n1n3z0m7pabqmw7ysn20mi8"; depends=[ggplot2 gtools MultiAssayExperiment plyr S4Vectors]; }; mitoODE = derive2 { name="mitoODE"; version="1.19.0"; sha256="1qkhf4y5cnwxv39lacdph3r030d9d4jc76lzgg9gl7gyk9801rhh"; depends=[KernSmooth MASS minpack_lm mitoODEdata]; }; - mlm4omics = derive2 { name="mlm4omics"; version="0.99.20"; sha256="1h6s1ddj73wy1v79vpvjsf5hkjyxf3fha5w2n2cqr89ix4k76l3l"; depends=[BH ggplot2 MASS Matrix Rcpp RcppEigen rstan rstantools StanHeaders]; }; + mixOmics = derive2 { name="mixOmics"; version="6.4.6"; sha256="1id5zcqqdzh72k41sc267fi7cbqyzlfwb8758xnxibgp9a3mjqci"; depends=[corpcor dplyr ellipse ggplot2 gridExtra igraph lattice MASS matrixStats rARPACK RColorBrewer reshape2 tidyr]; }; + mlm4omics = derive2 { name="mlm4omics"; version="0.99.22"; sha256="0yrz6cg6w8nsv5lkpzs43jla0wgmvb4bv66q5wb5f3p38fvym4c1"; depends=[BH ggplot2 MASS Matrix Rcpp RcppEigen rstan rstantools StanHeaders]; }; mogsa = derive2 { name="mogsa"; version="1.15.0"; sha256="02a9p3awa8lix75ghw8x0nm9dzccg57ydyg1hr5kxx3bq51lvj3v"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; }; monocle = derive2 { name="monocle"; version="2.9.0"; sha256="15m4221g6m5r8w3af9qk8jxqnqjjj31xvfcxi2n7dhfvqw4f35a1"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree densityClust dplyr fastICA ggplot2 HSMMSingleCell igraph irlba limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; }; mosaics = derive2 { name="mosaics"; version="2.19.0"; sha256="1d5b7rhxzzzlyapfq4fmml8k41fpha2bw398jzq6xsk52wfjjbiv"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; }; motifRG = derive2 { name="motifRG"; version="1.25.0"; sha256="0ramq5yk9ri04waj16vgcvr8jgd93afn2q8yr4avzaq9a1klsh7a"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 IRanges seqLogo XVector]; }; - motifStack = derive2 { name="motifStack"; version="1.25.0"; sha256="0ry64xf3gsiapickxzhbh9sn4yhwnvg9vqxv6wrj565wl284zd1h"; depends=[ade4 Biostrings grImport htmlwidgets MotIV scales XML]; }; - motifbreakR = derive2 { name="motifbreakR"; version="1.11.0"; sha256="1kaadjkcvdm1i8cpnz4qfyiwiffd0h61wx8mwa4x1xqyiwj5s04y"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr TFMPvalue VariantAnnotation]; }; - motifcounter = derive2 { name="motifcounter"; version="1.5.2"; sha256="0cs9cp09r6k63ap131ir13hcswipwshdzy2gg562v8yrnysvv96p"; depends=[Biostrings]; }; + motifStack = derive2 { name="motifStack"; version="1.25.3"; sha256="1qvillm4aflyws82gi6sk6wd8f0zpnm0srgv420l0plmiv9v8gaj"; depends=[ade4 Biostrings grImport htmlwidgets MotIV scales XML]; }; + motifbreakR = derive2 { name="motifbreakR"; version="1.11.1"; sha256="1mpwxh7yigxplm3pczmqczqbs9nbfz1f5jpl4j5wkgcxh634s42l"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges grImport Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr TFMPvalue VariantAnnotation]; }; + motifcounter = derive2 { name="motifcounter"; version="1.5.5"; sha256="1zf3sgl3d8wazbd673bmns3fx5r3ppbzlgrms3z2svzh9997z4gc"; depends=[Biostrings]; }; motifmatchr = derive2 { name="motifmatchr"; version="1.3.0"; sha256="0p1v2nbxw889ck8jsvw0qkxqxnpzqvha2k64r9f8xg2d06pfr7ya"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment TFBSTools]; }; mpra = derive2 { name="mpra"; version="1.3.0"; sha256="1bh73npgphq2xanx9sc9yz0dpcilcvwnwz030fpy2mvaipnrqpjc"; depends=[BiocGenerics limma S4Vectors scales statmod SummarizedExperiment]; }; - msPurity = derive2 { name="msPurity"; version="1.7.1"; sha256="0jf1r0p2v20g87lirzi956vkrzm25px9q47pbjfw3k2hf4k97pwp"; depends=[DBI doSNOW fastcluster foreach ggplot2 mzR plyr Rcpp reshape2 RSQLite stringr]; }; - msa = derive2 { name="msa"; version="1.13.0"; sha256="0z2haqbz22q1zxmks570vky1a1i101pscq2ryi50aj78g4k87ad1"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; }; + msPurity = derive2 { name="msPurity"; version="1.7.2"; sha256="018gawlqn1syhhqmg9dbdzxg2knrp4vwqpbbazdayxk8adsr4ak2"; depends=[DBI doSNOW fastcluster foreach ggplot2 mzR plyr Rcpp reshape2 RSQLite stringr]; }; + msa = derive2 { name="msa"; version="1.13.1"; sha256="0fcs489fmx6vhdmqmksqwlakg1a9cn44s9mbdcjqkx15lhcqaa9r"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; }; msgbsR = derive2 { name="msgbsR"; version="1.5.0"; sha256="1hlpg3zd4w514f1p0c36jsgg0dlirmnw1fq5l734yabgbf6zkv3l"; depends=[BSgenome easyRNASeq edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr R_utils Rsamtools S4Vectors SummarizedExperiment]; }; msmsEDA = derive2 { name="msmsEDA"; version="1.19.0"; sha256="0xni6k9ij49zzxlhnbhn6v0nij49m26cxyv6xdlwfp0jh37390gk"; depends=[gplots MASS MSnbase RColorBrewer]; }; msmsTests = derive2 { name="msmsTests"; version="1.19.0"; sha256="1kz9s9dc4rxz77k743ql6j84h2hv8fkbwl7707gqfs5789gj7w41"; depends=[edgeR msmsEDA MSnbase qvalue]; }; - multiClust = derive2 { name="multiClust"; version="1.11.3"; sha256="0gjn9pl685pkl2yv6dbkdqr9hc3pcl39fk2h3nrd1irl7gf7isrw"; depends=[amap cluster ctc dendextend mclust survival]; }; - multiMiR = derive2 { name="multiMiR"; version="1.3.0"; sha256="1zhpsipbcm1hqcc75nf0xjfm6v4nqc8bgp9pgj1v5q4ni8vffzsf"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; }; - multiOmicsViz = derive2 { name="multiOmicsViz"; version="1.5.0"; sha256="1z750jwpvcl679ikzlcyy0yrifx13abxy8wigsxwrbc4wcljqyqw"; depends=[doParallel foreach SummarizedExperiment]; }; + multiClust = derive2 { name="multiClust"; version="1.11.6"; sha256="1g5zxy0x3fipmdiw3dkwzjnrni9r7rcqc71jilq0jfr8z52h5kik"; depends=[amap cluster ctc dendextend mclust survival]; }; + multiHiCcompare = derive2 { name="multiHiCcompare"; version="0.99.46"; sha256="0f2h2xdprarri4x19jvac9irm7gba2x1dhaab1r6pl6hkkmasi01"; depends=[BiocParallel BLMA data_table dplyr edgeR GenomeInfoDb GenomeInfoDbData GenomicRanges HiCcompare metap pbapply pheatmap qqman]; }; + multiMiR = derive2 { name="multiMiR"; version="1.3.2"; sha256="19my81w8q1zva7p1k7wbjr69x3bmqwwkz2phmfmb6gaa2361gn6l"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; }; + multiOmicsViz = derive2 { name="multiOmicsViz"; version="1.5.1"; sha256="0zjp90z00dmd6k96ffmb1iljzf22asij7m90lj764z2xskii9nz0"; depends=[doParallel foreach SummarizedExperiment]; }; multiscan = derive2 { name="multiscan"; version="1.41.0"; sha256="08s4rpikrjzhip9zpb5dc0fi98hj304qlcvxm1agi881awlvpkig"; depends=[Biobase]; }; multtest = derive2 { name="multtest"; version="2.37.0"; sha256="1xlizjdzvxn0i9gs1jpkb07fkkx1prrr1v5n6kfvff9izh40cx6j"; depends=[Biobase BiocGenerics MASS survival]; }; muscle = derive2 { name="muscle"; version="3.23.0"; sha256="110wvrf2isiw2by15vkxsds5sxy68l1vav8fq55f5f8lx77450yp"; depends=[Biostrings]; }; - myvariant = derive2 { name="myvariant"; version="1.11.0"; sha256="14mskpia58g17ydcv2d535kslj0fwm8rm0n4mv1qm0rff81v5hn3"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; }; + mygene = derive2 { name="mygene"; version="1.17.2"; sha256="1fi43b84q73kfyq6dincnkx7glhzxw8c42vy63k2j19dqygzc0k7"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; }; + myvariant = derive2 { name="myvariant"; version="1.11.1"; sha256="0p4wan3cwmag2nnxza6zqc3rvidgcg6xdk3aqp1d40v1vyxd4j8c"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; }; mzID = derive2 { name="mzID"; version="1.19.0"; sha256="0czwvilzp756qfyjzf6x4wskg7w35zwl3df3md4p03v95c1ynbdk"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; }; - mzR = derive2 { name="mzR"; version="2.15.1"; sha256="0m9q5ja326wz7cjmd6b1lvkhjggg5mlw8mxaqa90fs4qz6cr8hw6"; depends=[Biobase BiocGenerics ProtGenerics Rcpp Rhdf5lib zlibbioc]; }; + mzR = derive2 { name="mzR"; version="2.15.5"; sha256="1kbnxini43zw1mvmbv15ms1na4d2piirzqq79w3d45a4dsdyjkkq"; depends=[Biobase BiocGenerics ncdf4 ProtGenerics Rcpp Rhdf5lib zlibbioc]; }; ncdfFlow = derive2 { name="ncdfFlow"; version="2.27.0"; sha256="0m29ncb8i4xndialy9x8iagyvamiacq6jvdbl8v9m0f18ygv9y81"; depends=[BH Biobase BiocGenerics flowCore flowViz Rcpp RcppArmadillo Rhdf5lib zlibbioc]; }; - ndexr = derive2 { name="ndexr"; version="1.3.0"; sha256="0558086vrjiliwpjyvwszy5dimq4p39x3gwiywx7jdjlzgwcv44q"; depends=[httr igraph jsonlite plyr tidyr]; }; + ndexr = derive2 { name="ndexr"; version="1.3.1"; sha256="1nann1ndc6zy04inb4ag7axi5hl407xr7v283lad1gvqmhrjnzii"; depends=[httr igraph jsonlite plyr tidyr]; }; nem = derive2 { name="nem"; version="2.55.0"; sha256="0y0yp1bq3ixkxdqjx4lbx5h1yfx2vsia2zpqnjjvp9hzqjddvvbl"; depends=[boot e1071 graph limma plotrix RBGL RColorBrewer Rgraphviz statmod]; }; - netReg = derive2 { name="netReg"; version="1.5.0"; sha256="15dzz0068s38rxp0vjz9ssa09575xw5nggxl86r2zxcmb93x3yng"; depends=[Rcpp RcppArmadillo]; }; - netSmooth = derive2 { name="netSmooth"; version="1.1.0"; sha256="1d2mpc9n32aah9dnmwk2bc44c9nq006i4xj79hg7z6cvsxkh67cb"; depends=[cluster clusterExperiment data_table entropy Matrix scater SingleCellExperiment SummarizedExperiment]; }; + netReg = derive2 { name="netReg"; version="1.5.1"; sha256="0zw8q4dy893jdsjmb3zhy66g8y0w6m9iqvf360bhrnr5kzdfi8ac"; depends=[Rcpp RcppArmadillo]; }; + netSmooth = derive2 { name="netSmooth"; version="1.1.1"; sha256="0pfqn3wmkmh4wvyy72pvy4f0z3h9vnpnnqp9l1cwgkpwwzlqsk9z"; depends=[cluster clusterExperiment data_table entropy Matrix scater SingleCellExperiment SummarizedExperiment]; }; netbenchmark = derive2 { name="netbenchmark"; version="1.13.0"; sha256="0ssagk6gwdbrqwc037y05xjbnaiv7k5mq8rmwmx6y3d74jwwpb3d"; depends=[c3net corpcor fdrtool GeneNet GENIE3 grndata Matrix minet PCIT pracma Rcpp]; }; netbiov = derive2 { name="netbiov"; version="1.15.0"; sha256="1njiy14g8pf4yps4npwsm4x883qgixwvv0f3p2pb69p9r4kg0phy"; depends=[igraph]; }; - nethet = derive2 { name="nethet"; version="1.13.0"; sha256="0kvwwcwm4hx1r3f24s84pw19vms0aj0bacd79c3r7z26mlmzw7zh"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network parcor]; }; + nethet = derive2 { name="nethet"; version="1.13.1"; sha256="1rsgm1war7y5hjxcihjjfnha52jphlh3sayh1wmxwxn56cqfnsdr"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network parcor]; }; netprioR = derive2 { name="netprioR"; version="1.7.0"; sha256="076b72g6b9k2zz277i6whjw49jcl6b3bmr9n652nc11d1ydwq3ic"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; }; netresponse = derive2 { name="netresponse"; version="1.41.0"; sha256="1spzd74z279rvpw0vpw3bw19gimhcdrcxk6hgxv1w7b0nllih606"; depends=[dmt ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz]; }; networkBMA = derive2 { name="networkBMA"; version="2.21.0"; sha256="1gax5312r6cz4s1qxxlg8k63dlk4ja8b57c2br1q0kpcdgbwhrqr"; depends=[BH BMA leaps Rcpp RcppArmadillo RcppEigen]; }; nnNorm = derive2 { name="nnNorm"; version="2.45.0"; sha256="0m8zcv7kyv7ll6bw599nlihmssfizivkrfm1sqr1ndjwmc8b6blp"; depends=[marray nnet]; }; nondetects = derive2 { name="nondetects"; version="2.11.0"; sha256="0iiwvad8cb3g2a7701vci7g2qkvhc43arw4cw7zpmg46qk6yhvv0"; depends=[arm Biobase HTqPCR limma mvtnorm]; }; normalize450K = derive2 { name="normalize450K"; version="1.9.0"; sha256="01j9gp2d7b8n30ckf61ywncw0il81lf6d0sfczr39bqdq2x2xyj3"; depends=[Biobase illuminaio quadprog]; }; - normr = derive2 { name="normr"; version="1.7.1"; sha256="15ajyr38km4fph8np8r171j4f97fwyvy0jcqdbs79gdh792h12sm"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; }; + normr = derive2 { name="normr"; version="1.7.2"; sha256="16f73sigq43f5fy74zhcz9pzcvd9hra5yzq4fp5sdkhnsnjd0b02"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; }; npGSEA = derive2 { name="npGSEA"; version="1.17.0"; sha256="0fw33zgrp9wkchddagsd93ijkspi20d8p7yvsqspqrjy3yv6yq3i"; depends=[Biobase BiocGenerics GSEABase]; }; - nucleR = derive2 { name="nucleR"; version="2.13.0"; sha256="17fndr7wp7i31k3g18chm6nvqmh1di8s0l0v3kp61sn7v4qbfcc8"; depends=[Biobase BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr Rsamtools S4Vectors ShortRead]; }; + nuCpos = derive2 { name="nuCpos"; version="0.99.1"; sha256="0p1nijap5a66q9ldh3mqdjg7b29wz1pfixy3zrwhmr05gar5c78y"; depends=[]; }; + nucleR = derive2 { name="nucleR"; version="2.13.1"; sha256="19y523lg3a2jb9ajqyz0qky292makxmirj9f9244n9xmcm84sm2w"; depends=[Biobase BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr Rsamtools S4Vectors ShortRead]; }; nucleoSim = derive2 { name="nucleoSim"; version="1.9.0"; sha256="0bn8gihg4b70gmdyvn91i5adzfbkfaqcb59kv3y56dss04ss736j"; depends=[IRanges S4Vectors]; }; occugene = derive2 { name="occugene"; version="1.41.0"; sha256="13dqbp1kaan56xqlgfdqrld0l3qwky6487mf9j0g7788yxwl1fnm"; depends=[]; }; odseq = derive2 { name="odseq"; version="1.9.0"; sha256="0yyg4y77ch7x0f6xa10wnz8kydc2pjrrpbvdc448388acmmbpdbl"; depends=[kebabs mclust msa]; }; - oligo = derive2 { name="oligo"; version="1.45.0"; sha256="1w36wqry07ml048q55xnckb2mldv4llivsc72b9j5vhn54776n9d"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; }; - oligoClasses = derive2 { name="oligoClasses"; version="1.43.1"; sha256="14h79m2pq7a5472xh9rvbn5dfr07nczx0iz8g7jc7sji10jp83nd"; depends=[affyio Biobase BiocGenerics BiocInstaller Biostrings DBI ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; }; - omicRexposome = derive2 { name="omicRexposome"; version="1.3.0"; sha256="1x18vkfn1m8cwzwdg9lvpbmiprgpy3hs4x9h6jwqavgdnpq8lv60"; depends=[Biobase ggplot2 ggrepel gridExtra isva limma omicade4 PMA SmartSVA stringr SummarizedExperiment sva]; }; + oligo = derive2 { name="oligo"; version="1.45.2"; sha256="01z9jhnnnnaprpp7zcl4727wkwrhn25djb94fiw7ycb830nqnkxv"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; }; + oligoClasses = derive2 { name="oligoClasses"; version="1.43.3"; sha256="13c7hkbifylm315h4qgqbn9fv5i0742k4rmcjf72ll9wj1yqjzf9"; depends=[affyio Biobase BiocGenerics BiocManager Biostrings DBI ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; }; + omicRexposome = derive2 { name="omicRexposome"; version="1.3.1"; sha256="14dqybpgj57avgsmjhf63lcy5n8r4g77idlpnblkqj0c232mpq6v"; depends=[Biobase ggplot2 ggrepel gridExtra isva limma MultiDataSet omicade4 PMA rexposome SmartSVA stringr SummarizedExperiment sva]; }; omicade4 = derive2 { name="omicade4"; version="1.21.0"; sha256="055jnv8m9fhj2hixbc997mqv56p07azg40k8qb91mdc8fidypka6"; depends=[ade4 made4]; }; - omicplotR = derive2 { name="omicplotR"; version="1.1.2"; sha256="0myr943y0dvpyh75sjc41cj9i77psmy7j60vl3y4daqd9vbgpkws"; depends=[ALDEx2 compositions knitr matrixStats rmarkdown shiny vegan zCompositions]; }; + omicplotR = derive2 { name="omicplotR"; version="1.1.4"; sha256="0d2jhnjhxl2kl8s33fl45v2yyb85gjx9api8qwhpiny4bh12rq3q"; depends=[ALDEx2 compositions knitr matrixStats rmarkdown shiny vegan zCompositions]; }; omicsPrint = derive2 { name="omicsPrint"; version="1.1.0"; sha256="0zsx8zabz07jyfl1xj28ak6k69jfrrig38psl7qny82ydz8bnbas"; depends=[MASS matrixStats MultiAssayExperiment RaggedExperiment SummarizedExperiment]; }; oncomix = derive2 { name="oncomix"; version="1.3.0"; sha256="0rpwkksxakhwhqvir646gj0x8b1nqsnc2cvjzvh0mlxvv4zmmc0n"; depends=[ggplot2 ggrepel mclust RColorBrewer SummarizedExperiment]; }; - oneSENSE = derive2 { name="oneSENSE"; version="1.3.0"; sha256="1krimcp6p2m6ls7vkkyfpacjxmg8fa1shwjw5cl2nvcgbn391k15"; depends=[flowCore gplots plotly Rtsne scatterplot3d shiny shinyFiles webshot]; }; + oneSENSE = derive2 { name="oneSENSE"; version="1.3.1"; sha256="15790wlbw8ff752lqipmib5mq1chq1wvrrq6yj5zargdv4lffrik"; depends=[flowCore gplots plotly Rtsne scatterplot3d shiny shinyFiles webshot]; }; onlineFDR = derive2 { name="onlineFDR"; version="0.99.7"; sha256="18naq5jfds1njalqqsi6b1hs2sld55flnv63s8yk2cnhpjcfyq47"; depends=[]; }; - ontoProc = derive2 { name="ontoProc"; version="1.3.1"; sha256="0hh9rha7b5y3hnahmk1mkmwi22bdrjnm6r7fym2lpgdaihs3b43z"; depends=[AnnotationDbi Biobase ontologyIndex S4Vectors shiny]; }; - openCyto = derive2 { name="openCyto"; version="1.19.1"; sha256="1i8n1yzrnmbl0h6ykqj9hl30nml8nvlvz4b975w1jh5sp21x0gcv"; depends=[Biobase clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; - openPrimeR = derive2 { name="openPrimeR"; version="1.3.0"; sha256="0sq1f9ir2n9rrxa10cjwfsk1rwmi0aryd31z9zb9i5hciinv99gy"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr uniqtag XML]; }; - openPrimeRui = derive2 { name="openPrimeRui"; version="1.3.0"; sha256="08ysqxf6dl5rsbxgfv6z9llxclmqn2gwf775r3py0x49sx4ra2hn"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; }; - oposSOM = derive2 { name="oposSOM"; version="1.19.1"; sha256="16rnwlay7m6y4cf9333bq7zwnp5lcy1i1p23zl0mcvzlb9mam4j1"; depends=[ape arules Biobase biomaRt fastICA fdrtool igraph pixmap scatterplot3d som tsne]; }; - oppar = derive2 { name="oppar"; version="1.9.0"; sha256="0j26hqskvfv8qb13kmi4dcg3ylzxgwxl4xn4chvi5k8svli4r2qw"; depends=[Biobase GSEABase GSVA]; }; - pRolocGUI = derive2 { name="pRolocGUI"; version="1.15.0"; sha256="0vrpylrnl02abj6akcp0fb06fk18k42xv78g5f4cyy2jqdgqgijq"; depends=[Biobase dplyr DT ggplot2 MSnbase scales shiny]; }; + ontoProc = derive2 { name="ontoProc"; version="1.3.5"; sha256="0xv0hin8khcpyj6dxnadncy62isdixjgaq8m1n8i49b0f368bgji"; depends=[AnnotationDbi Biobase ontologyIndex S4Vectors shiny]; }; + openCyto = derive2 { name="openCyto"; version="1.19.2"; sha256="0m2lalpd9hn1vn62n6lfz4kflfdq188m5vcxdjmlj7wzkxijdcmw"; depends=[Biobase BiocGenerics clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; }; + openPrimeR = derive2 { name="openPrimeR"; version="1.3.2"; sha256="0fc12pzp2b7ns1k039v43ns1d10k9lmww6pjrgvyxhrwdd16b9vn"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr tinytex uniqtag XML]; }; + openPrimeRui = derive2 { name="openPrimeRui"; version="1.3.1"; sha256="10hky16l94bx0n3r12kq8951wjcm30kgp8qciqgji563kjq9lbww"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; }; + oposSOM = derive2 { name="oposSOM"; version="1.99.0"; sha256="1k85a2ixnxzclfaw5is9myppmb3slpyd6n1jyg67y0ii6zac2aig"; depends=[ape Biobase biomaRt fastICA fdrtool igraph pixmap Rcpp RcppParallel scatterplot3d tsne]; }; + oppar = derive2 { name="oppar"; version="1.9.1"; sha256="0irzz17xd1vf5syqzr8sp2rv7076xi64mr2anwp63xfx2xh02wrp"; depends=[Biobase GSEABase GSVA]; }; + pRoloc = derive2 { name="pRoloc"; version="1.21.9"; sha256="11l2jssdrg3lz0svnjskk280xlkyzfymfhkq13517zv6jshn23gl"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class coda dendextend e1071 FNN ggplot2 gtools hexbin kernlab knitr LaplacesDemon lattice MASS mclust mixtools MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; }; + pRolocGUI = derive2 { name="pRolocGUI"; version="1.15.2"; sha256="0yljbianwqb214g47s9s5s80sfiay6vxrgkzciibyr0bmn7bmrmb"; depends=[Biobase dplyr DT ggplot2 MSnbase pRoloc scales shiny]; }; paircompviz = derive2 { name="paircompviz"; version="1.19.0"; sha256="1glli54k00gpm04p177hwgsdq352ypc7r8swbksk18j8xghk8cq4"; depends=[Rgraphviz]; }; pandaR = derive2 { name="pandaR"; version="1.13.0"; sha256="13mv40jsclngfzcapscw0wxv67dd2ym4kkpcvy2v03z37ak3n1fk"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; }; - panelcn_mops = derive2 { name="panelcn.mops"; version="1.3.0"; sha256="17d8ms86xvhqprwazi3cnv3sxyaxmammkf3dczka78i0dwl0p0df"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; + panelcn_mops = derive2 { name="panelcn.mops"; version="1.3.1"; sha256="13p3rrmkjv58f3hac26bxgwrknx6bhdhxkg2c4z1yxh9jny96h9a"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; }; panp = derive2 { name="panp"; version="1.51.0"; sha256="1yrxsjc0r9z0nfgbc9n9p5mhqhyx7x76v7vcjah6hdv4svi78csc"; depends=[affy Biobase]; }; parglms = derive2 { name="parglms"; version="1.13.3"; sha256="0x8j7ffz8h7303n90v27wcb71x75m7j1rq4yz59iv9fpis16yj27"; depends=[BatchJobs BiocGenerics doParallel foreach]; }; - parody = derive2 { name="parody"; version="1.39.0"; sha256="0lkv6csikcm2jw70gz3bkzjzj48w8dlx1gfc0sh5l49q2szn3fha"; depends=[]; }; + parody = derive2 { name="parody"; version="1.39.1"; sha256="0213vnj1mbnc9zhrxidqjz5ls8nrgz7ljmz0f9hrbixn2k369ccl"; depends=[]; }; pathRender = derive2 { name="pathRender"; version="1.49.0"; sha256="1ln36h3jy35398r92i5hm4qvcjfsmc0frpy4dpgi75ab1wgjzb1s"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; }; pathVar = derive2 { name="pathVar"; version="1.11.2"; sha256="1v0pia06qx995b9y4vllp844f5846877zyl587xz5026mnbr5p5l"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; }; pathifier = derive2 { name="pathifier"; version="1.19.0"; sha256="0sazl4wi6pivvr2r098parc8j68hq8apfjb0nk6vicfisx0dqk1h"; depends=[princurve R_oo]; }; pathprint = derive2 { name="pathprint"; version="1.11.3"; sha256="14x9i2gkra49aqnpi0xd94430nl05sw3yr85ramaxrzavm7lxvsf"; depends=[]; }; - pathview = derive2 { name="pathview"; version="1.21.0"; sha256="0s8mq51gknca91qgy4q7fmgm4ga251w214f3zapc7zlxykb2qrys"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; }; - paxtoolsr = derive2 { name="paxtoolsr"; version="1.15.0"; sha256="1fr6w5jbhj5rdsb53cafzsdn23b2rfcyyi6ivcfvn408x59cg3fg"; depends=[data_table httr igraph jsonlite plyr R_utils rJava rjson XML]; }; + pathview = derive2 { name="pathview"; version="1.21.2"; sha256="14021aqb36s56w9j439ydgbv2b4yk7sbsndrmyzbdxrisi6q3xyw"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; }; + paxtoolsr = derive2 { name="paxtoolsr"; version="1.15.1"; sha256="13rc66d9fyd85haylmc55irvshrfrxgny3l539ga1zq4h6bhlxz6"; depends=[httr igraph jsonlite plyr R_utils readr rJava rjson XML]; }; pbcmc = derive2 { name="pbcmc"; version="1.9.0"; sha256="1hxhpxixl5jfpiqpwqvkfcnp2k7sw43asc5ikj6qpl4p5xrrfn0d"; depends=[Biobase BiocGenerics BiocParallel cowplot genefu ggplot2 gridExtra limma reshape2]; }; - pcaExplorer = derive2 { name="pcaExplorer"; version="2.7.0"; sha256="138a6qrg0cqq5n5565i5y4fzlbk79hjk11ziz8hh2dxbymv1h9mq"; depends=[AnnotationDbi biomaRt d3heatmap DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats IRanges knitr limma NMF pheatmap plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; }; - pcaGoPromoter = derive2 { name="pcaGoPromoter"; version="1.25.0"; sha256="10c08lawhg1p7jydk2bb5z6rjn7pjrfr069s06syababq75j1pnw"; depends=[AnnotationDbi Biostrings ellipse]; }; - pcaMethods = derive2 { name="pcaMethods"; version="1.73.0"; sha256="0k079s8fwqhwk5hmbl0rqi52nav2dzbbsilnn2a2x92c2rzfiqc0"; depends=[Biobase BiocGenerics MASS Rcpp]; }; + pcaExplorer = derive2 { name="pcaExplorer"; version="2.7.6"; sha256="0dwhd5ybli05wlv8j0l639phbksm0h9g418bdq2x9f7h1vskr3z5"; depends=[AnnotationDbi biomaRt d3heatmap DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats IRanges knitr limma NMF pheatmap plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; }; + pcaGoPromoter = derive2 { name="pcaGoPromoter"; version="1.25.1"; sha256="1dfvd3bb7v5dz58icb7j802fj358waa6xs8sasz0kvlvapma9kx1"; depends=[AnnotationDbi Biostrings ellipse]; }; + pcaMethods = derive2 { name="pcaMethods"; version="1.73.1"; sha256="0vslvglp2j6zkkbjcwj66bbv683qzjnqlpa8adb8wmgc2l4a1rkv"; depends=[Biobase BiocGenerics MASS Rcpp]; }; pcot2 = derive2 { name="pcot2"; version="1.49.0"; sha256="0ffg35602h7k904dq47sgnfyky041alnypaf3gvx7m6f8yszq46c"; depends=[amap Biobase]; }; - pcxn = derive2 { name="pcxn"; version="2.3.0"; sha256="1d7maq8vbxcs1bvz4qlc29583nbfq6jpan0gsqday51xj7ngqbcs"; depends=[pcxnData pheatmap]; }; + pcxn = derive2 { name="pcxn"; version="2.3.1"; sha256="0yp9hfbval7ind2nqa2n4nfafgbrfr4gq7hm7dkrfampp7if66j3"; depends=[pcxnData pheatmap]; }; pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.45.0"; sha256="15whr6rjdf75z6wg9k8zsyvfn08vidimzx2rw6ki1zmbh0fz8in6"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; }; pepStat = derive2 { name="pepStat"; version="1.15.0"; sha256="08dpwiphw9s8dafy4m946jxi1jfyc3lzzdg4h0ax7d6knzq0za73"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; }; pepXMLTab = derive2 { name="pepXMLTab"; version="1.15.0"; sha256="1bwp82zvg65yrhlx1xk2jci9fqsgc83h1x7124ci2afzlvx56ms5"; depends=[XML]; }; perturbatr = derive2 { name="perturbatr"; version="1.1.0"; sha256="0cwk2f0bm9vlgdngb9blcpcwg2gl8ik0rdx0a6i36qzdd256qk91"; depends=[assertthat diffusr doParallel dplyr foreach formula_tools ggplot2 igraph lazyeval lme4 magrittr rlang scales tibble tidyr]; }; - pgca = derive2 { name="pgca"; version="1.5.0"; sha256="1scxcrfs8b0rw38c0v569dnq2b5viqvm3ckjwm1gzqgxcjy6r324"; depends=[]; }; - phantasus = derive2 { name="phantasus"; version="1.1.2"; sha256="1g4q9ff11i7xfw29g9mqwqvr1py4mwwddd0yr1dhw92abbc5w2z4"; depends=[assertthat Biobase fgsea GEOquery ggplot2 htmltools httpuv httr jsonlite limma opencpu protolite rhdf5 Rook stringr svglite]; }; + pgca = derive2 { name="pgca"; version="1.5.1"; sha256="11la42gqiqxwlms84lc1dsvpys3bmrzwz5d8vcx4xwnl9pc3lqhh"; depends=[]; }; + phantasus = derive2 { name="phantasus"; version="1.1.5"; sha256="148mxhmc0qymjdkx64ji4karaazx89vmwmyrrk8d1g7m3lj1qpvl"; depends=[assertthat Biobase ccaPP fgsea GEOquery ggplot2 gtable htmltools httpuv httr jsonlite limma Matrix Matrix_utils opencpu pheatmap protolite rhdf5 Rook scales stringr svglite]; }; phenoTest = derive2 { name="phenoTest"; version="1.29.0"; sha256="10mw83ivb99ipndjjc5r69wpsanfvzx01bfpzhq5pygjzhl6m8jb"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach HTSanalyzeR limma mgcv SNPchip survival xtable]; }; phenopath = derive2 { name="phenopath"; version="1.5.0"; sha256="05a1d7apyhg4d4nahl97i0794fji6dnnd454wfww89adjx68nfnc"; depends=[dplyr ggplot2 Rcpp SummarizedExperiment tibble tidyr]; }; - philr = derive2 { name="philr"; version="1.7.0"; sha256="165k6cnj08lpkw66zljiqqwfy1knd2n46mg734d0fiy72j2va4z2"; depends=[ape ggplot2 ggtree phangorn tidyr]; }; - phosphonormalizer = derive2 { name="phosphonormalizer"; version="1.5.0"; sha256="0m9lgg1wcyy3ppxvmkgdv5ccz48j5mw1fsxg21vw08hpm6fm9y60"; depends=[matrixStats plyr]; }; - phyloseq = derive2 { name="phyloseq"; version="1.25.0"; sha256="1344gil3dsnvy92fsp91wvh6j1rd7xzjjapmjkvdz5rjs5rh0kd2"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; }; - piano = derive2 { name="piano"; version="1.21.0"; sha256="1d7gld59bryzcvnvl6x8wx3v1wji58rs4zszsqpyz73qmw8ikw0d"; depends=[Biobase BiocGenerics fgsea gplots igraph marray relations]; }; + philr = derive2 { name="philr"; version="1.7.3"; sha256="1nzn6xv5kkm1babdimhvcjd5ql58hhj772asjd1i6r4qbidzyjfd"; depends=[ape ggplot2 ggtree phangorn tidyr]; }; + phosphonormalizer = derive2 { name="phosphonormalizer"; version="1.5.1"; sha256="1bvbjm42nr1mjxixbcd39g4qz4171qrb7x7ssz5jkrf8y3j26yxa"; depends=[matrixStats plyr]; }; + phyloseq = derive2 { name="phyloseq"; version="1.25.3"; sha256="081f1fwkda6am9i64y2zq8z6xiz9z7hfz3agrlxkfrrfc455ch65"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; }; + piano = derive2 { name="piano"; version="1.21.1"; sha256="1adwsk3vkdg3695yjfw6sip1ww8zfd90dmmbzsf1kryidlkl60nz"; depends=[Biobase BiocGenerics fgsea gplots igraph marray relations]; }; pickgene = derive2 { name="pickgene"; version="1.53.0"; sha256="1nklcgm3wryljq22hc3fcja6x2kwa9bilp76gzhy8zpj8swwjszl"; depends=[MASS]; }; pint = derive2 { name="pint"; version="1.31.0"; sha256="10kwlp947h03w8xqcs9qcyp21wvx60sl47k2cnbrdhva3wf35vp3"; depends=[dmt Matrix mvtnorm]; }; - pkgDepTools = derive2 { name="pkgDepTools"; version="1.47.1"; sha256="08wc5qklyddz5p237q75dipvykiksdr17xcd2qkfzj3138wfkgvy"; depends=[graph RBGL]; }; + pkgDepTools = derive2 { name="pkgDepTools"; version="1.47.2"; sha256="12bc56a5l3p9mdi15ryinicvyyzv58qwprksixjwm54mx42r5kw2"; depends=[graph RBGL]; }; plateCore = derive2 { name="plateCore"; version="1.39.0"; sha256="0vf42ms3vky8n2n7x16kc284252zifjmch32lsww0lmsxv0h857n"; depends=[Biobase flowCore flowStats flowViz lattice latticeExtra MASS robustbase]; }; - plethy = derive2 { name="plethy"; version="1.19.0"; sha256="05v123qrpasl11kivp1p2ib0v638yi4y19gk4df8mfald95nxcmn"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; }; + plethy = derive2 { name="plethy"; version="1.19.1"; sha256="0pmrryxkxpgrb8c4pr25ajfn3v6m53810xz9da1j3hnyk9l42ha7"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; }; plgem = derive2 { name="plgem"; version="1.53.0"; sha256="04hwkr3v126mildi76jfr5b8s8lly9z60iydh5i3dc5zsyd6h84f"; depends=[Biobase MASS]; }; plier = derive2 { name="plier"; version="1.51.0"; sha256="1m7bwaypnaw7kk756k0wl6xi3s0j9awi986lpa8ncjv587q0442h"; depends=[affy Biobase]; }; + plotGrouper = derive2 { name="plotGrouper"; version="0.99.43"; sha256="1b36ay09h0fx3kcyiw1pd48750b6slqzidw8g2bvjpgw2i03f4ww"; depends=[colourpicker dplyr egg ggplot2 ggpubr gridExtra gtable Hmisc magrittr readr readxl rlang scales shiny shinythemes stringr tibble tidyr]; }; plrs = derive2 { name="plrs"; version="1.21.0"; sha256="18k3xad3gmkw74klyvqzbvnlr1pq93is6dqxm2bxb4cmzar12f6k"; depends=[Biobase BiocGenerics CGHbase ic_infer marray quadprog Rcsdp]; }; plw = derive2 { name="plw"; version="1.41.0"; sha256="0q9dwj7rznhdj1h34ygnw0snfswnr8ycx0927jzsiiycz31n8z0f"; depends=[affy MASS]; }; - plyranges = derive2 { name="plyranges"; version="1.1.8"; sha256="10p0i8q229gy0z3fg90m3xaib32v9w1zxcmn3gb87ipz9mic8ykk"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges IRanges magrittr rlang Rsamtools rtracklayer S4Vectors tidyr tidyselect]; }; + plyranges = derive2 { name="plyranges"; version="1.1.10"; sha256="0q9dsgnflr9gly3x4kbvr8ambfz5k5mvgn6hj9qyyb2vy6viqvni"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges IRanges magrittr rlang Rsamtools rtracklayer S4Vectors tidyr tidyselect]; }; pmm = derive2 { name="pmm"; version="1.13.0"; sha256="0p0xnkz6hgnpvai7947861kw5hmjwwf3zj2y423whdr7x2lpdayw"; depends=[lme4]; }; - podkat = derive2 { name="podkat"; version="1.13.0"; sha256="1h297id3gxix06xmhqkl1lc5gfp4vi8jkfh2gpld4bw233fvi6h5"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rsamtools]; }; + podkat = derive2 { name="podkat"; version="1.13.1"; sha256="0brp4d5y0708yv1b2jylywp4j7fknxy5vayss5jr9xp82sbahagz"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rsamtools]; }; pogos = derive2 { name="pogos"; version="1.1.0"; sha256="1135bxxhamcxs5hn6hq43hc7s7cr9v0jy2884dz7f9qvgnrqhymi"; depends=[ggplot2 httr ontoProc rjson S4Vectors shiny]; }; - polyester = derive2 { name="polyester"; version="1.17.0"; sha256="0dz73jsyx3yivpmxz7p1q14i2rvj388bq53d7w1mz3ixrqilzgz2"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; }; - powerTCR = derive2 { name="powerTCR"; version="1.1.1"; sha256="0427r8qwy8j3z2mpvka2b6y2k39nwiy86gb06njs6m19f597936v"; depends=[cubature evmix magrittr purrr tcR truncdist VGAM]; }; + polyester = derive2 { name="polyester"; version="1.17.2"; sha256="1f2vd15qfkbka9pi88n61mrsmxx7pnl88aiarm5ahy4nmdv3fyrq"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; }; + powerTCR = derive2 { name="powerTCR"; version="1.1.4"; sha256="0zf2ip194y5ad7xzzkplv1lbilpns2l78flf8snrvi14n8588gjj"; depends=[cubature doParallel evmix foreach magrittr purrr tcR truncdist vegan VGAM]; }; ppiStats = derive2 { name="ppiStats"; version="1.47.0"; sha256="0prrs1g99g55i993689c6s497crijnl96z2qzgga1y9w4zbf6g88"; depends=[Biobase Category graph lattice ppiData RColorBrewer ScISI]; }; - pqsfinder = derive2 { name="pqsfinder"; version="1.9.0"; sha256="1igg500dvwq1lvxyl0c8fcdkgpmxzsxcd6c24pz0dhjqsaxml2as"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; }; + pqsfinder = derive2 { name="pqsfinder"; version="1.9.2"; sha256="1hj0mx9ii7rxjcwn8mg2ywhlzpf4ckwxf8w9ms7fkj7kk37r9wy1"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; }; prada = derive2 { name="prada"; version="1.57.0"; sha256="0isj6w4lzfsqwwzs3njddabn2xznjqhp0bbihwfvc31kiya9k8di"; depends=[Biobase BiocGenerics MASS RColorBrewer rrcov]; }; - prebs = derive2 { name="prebs"; version="1.21.0"; sha256="0q5ibq492jw8axp50qijn0fsa5qxarxnlxz4s8hv3ql6rjlsiw8v"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; }; + prebs = derive2 { name="prebs"; version="1.21.3"; sha256="0gqgl5sqsn92b5rck85nn4ri5b6mzvgyk13n9dp5qa0hxvdifhx4"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; }; predictionet = derive2 { name="predictionet"; version="1.27.0"; sha256="0ls88pw7k1vy3qjzl91dj6kfbkgvz67448zhj1b3g308b33qasqk"; depends=[catnet igraph MASS penalized RBGL]; }; preprocessCore = derive2 { name="preprocessCore"; version="1.43.0"; sha256="13859ip42jk6j6ngs8bwkzfarrqzd0jzhq9kdgsnicl9kf9k9vj6"; depends=[]; }; + primirTSS = derive2 { name="primirTSS"; version="0.99.29"; sha256="17d2x3y5iiz0r840d8adkb7lypdyhp76izxbkj42b89rqsfm5v2j"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg38 dplyr GenomicRanges GenomicScores Gviz IRanges JASPAR2018 phastCons100way_UCSC_hg38 purrr R_utils rtracklayer S4Vectors shiny stringr TFBSTools tibble tidyr]; }; proBAMr = derive2 { name="proBAMr"; version="1.15.0"; sha256="1cl1ns7m1d1n3ayhga7f45xrjx9cy2a8l9xs2z7x3074kx8h8xxg"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; }; proFIA = derive2 { name="proFIA"; version="1.7.0"; sha256="1qx79xamr77rjdfr50ms0dzrmwqwc2fzd24k2njbknxvz8kay5is"; depends=[Biobase BiocParallel minpack_lm missForest pracma ropls xcms]; }; - procoil = derive2 { name="procoil"; version="2.9.0"; sha256="048wkmsidcw31mqjli2vspkf332ddx74dd709xbw5bkggw5l5a0b"; depends=[Biostrings kebabs S4Vectors]; }; + procoil = derive2 { name="procoil"; version="2.9.1"; sha256="1dhb7aphl93rxqk2k3fx8nrwgbd07wckrfx44c72fq0biam5qi5j"; depends=[Biostrings kebabs S4Vectors]; }; profileScoreDist = derive2 { name="profileScoreDist"; version="1.9.0"; sha256="1jv9szg451ljggx458sgcgiaf1p6i7sin62lhbh6b8jn1s4h7qrw"; depends=[BiocGenerics Rcpp]; }; progeny = derive2 { name="progeny"; version="1.3.0"; sha256="0rini10n59yzyq7bzckbyxvvl2lgj35k4dzm72lx47cws8nlqyl0"; depends=[Biobase]; }; - prot2D = derive2 { name="prot2D"; version="1.19.0"; sha256="1aawirq8plgdrz88yzzqh3p1m8y17ygf2l3a433lzrm3ffz6y3qx"; depends=[Biobase fdrtool impute limma MASS Mulcom qvalue samr st]; }; - proteinProfiles = derive2 { name="proteinProfiles"; version="1.21.0"; sha256="0zvgf4zmx42idyy8c6zfmf4gv22gxpyw1bs8285d9bfjk7qpvgwc"; depends=[]; }; + prot2D = derive2 { name="prot2D"; version="1.19.1"; sha256="141f38lcvrm0nirghx31gr3qzfq3q5zmqvvzcf5071s60hhm3syb"; depends=[Biobase fdrtool impute limma MASS Mulcom qvalue samr st]; }; + proteinProfiles = derive2 { name="proteinProfiles"; version="1.21.1"; sha256="1s35xglin78hv8f83jzi1racvklmnpf3gyjqxl60fj2i8b2r27dz"; depends=[]; }; proteoQC = derive2 { name="proteoQC"; version="1.17.0"; sha256="17a6wmkxr8jfb7nbwykfc562fgj4p8addq5idajag2ijaiycvzz5"; depends=[dplyr ggplot2 MSnbase Nozzle_R1 plotly plyr reshape2 rmarkdown rpx rTANDEM seqinr tidyr VennDiagram XML]; }; psichomics = derive2 { name="psichomics"; version="1.7.0"; sha256="0vj20pw305p4i08s7kxj0np1xxi8mhdlasagypc76ysnlhq0w6bn"; depends=[AnnotationHub cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma miscTools pairsD3 plyr R_utils Rcpp shiny shinyBS shinyjs stringr survival XML xtable]; }; - psygenet2r = derive2 { name="psygenet2r"; version="1.13.0"; sha256="0hpipknbcg3ic6sr19ksy1zs71h2kk3p1bvvhqy4xirajzqf3z41"; depends=[BgeeDB Biobase BiocInstaller biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; }; - puma = derive2 { name="puma"; version="3.23.0"; sha256="1h299ach0bff17az4vfa7dbb9x8z3b32mfmg322afpmfvj3xdqa7"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; - pvac = derive2 { name="pvac"; version="1.29.0"; sha256="0ax1pndxw4knhas0cp54b9gyr3xjl6rriyif1sccmqrszswkdv06"; depends=[affy Biobase]; }; - pvca = derive2 { name="pvca"; version="1.21.0"; sha256="0ayi9f2zd5f3c96w8kfb68nmd6idbg1l19h0ys1zdjgzz1dkqqc2"; depends=[Biobase lme4 Matrix vsn]; }; + psygenet2r = derive2 { name="psygenet2r"; version="1.13.3"; sha256="0ldyrzhxw7m146yfm5fjr917g089f0mnhddinsqmd7h5pykhidb2"; depends=[BgeeDB Biobase BiocManager biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; }; + puma = derive2 { name="puma"; version="3.23.3"; sha256="0jk8696hna14c261ni1xpi5klfpgzjci9yd62nkqfvf3pynl12a9"; depends=[affy affyio Biobase mclust oligo oligoClasses]; }; + pvac = derive2 { name="pvac"; version="1.29.2"; sha256="087bmn6snyvw7z3j3xzga31rq4w81fxx46c54drapz6pfjmc0gzy"; depends=[affy Biobase]; }; + pvca = derive2 { name="pvca"; version="1.21.1"; sha256="0j2hqix5ih462rr5mpxav8whvkvng3v497qiznb7nlv20p6swgbi"; depends=[Biobase lme4 Matrix vsn]; }; pwOmics = derive2 { name="pwOmics"; version="1.13.0"; sha256="0y4jsybxd6bcv9hqa25zij5lsbh55790njdy0p383pywbsn2dwvs"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots graph igraph rBiopaxParser STRINGdb]; }; - qPLEXanalyzer = derive2 { name="qPLEXanalyzer"; version="0.99.9"; sha256="0kaa1y5m150b3c6chpkadcj5l446kjq2hhvwf17n1gn58gzmbalv"; depends=[assertthat Biobase BiocGenerics Biostrings dplyr GenomicRanges ggdendro ggplot2 IRanges limma magrittr MSnbase preprocessCore purrr RColorBrewer statmod stringr tibble tidyr]; }; - qcmetrics = derive2 { name="qcmetrics"; version="1.19.0"; sha256="1m2q9lhvk9yicsn5anw88hvs3jg7wqfm9vhm1g43hbgjbqy4jzqj"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; }; + qPLEXanalyzer = derive2 { name="qPLEXanalyzer"; version="0.99.12"; sha256="11q97nx0yss8w69jvq58mw34lma700rzkkkxs0qlga4hijjkm3v7"; depends=[assertthat Biobase BiocGenerics Biostrings dplyr GenomicRanges ggdendro ggplot2 IRanges limma magrittr MSnbase preprocessCore purrr RColorBrewer statmod stringr tibble tidyr]; }; + qcmetrics = derive2 { name="qcmetrics"; version="1.19.2"; sha256="043ybq0ykry2r5xh2gv76lbg16723zsflic930q12hc1pxncxa8m"; depends=[Biobase knitr Nozzle_R1 pander S4Vectors xtable]; }; qpcrNorm = derive2 { name="qpcrNorm"; version="1.39.0"; sha256="18h58d58c0hs804n0xzsn0ydp4xw5cvab447zxq50g4adajjf7r8"; depends=[affy Biobase limma]; }; - qpgraph = derive2 { name="qpgraph"; version="2.15.0"; sha256="1q6lrhxq4zra6x3wx3ikc70np8yqz8b6hzgdiy4fxx6b4kjcpnd3"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; }; + qpgraph = derive2 { name="qpgraph"; version="2.15.2"; sha256="0lw5wfcw9br8k4wr70vp9xqgfjhbnzhjxfw4hzyp9z9h54vb9fay"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; }; qrqc = derive2 { name="qrqc"; version="1.35.0"; sha256="1mcb7gpncr91lq95vmbf6skjm5hxqlzx25inac3zwj3j4q07ipnk"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rsamtools testthat xtable]; }; - qsea = derive2 { name="qsea"; version="1.7.3"; sha256="11icpr1x374r77kn7fdlys37m8q6xi7g84gnn6m0wdx7srla3aal"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges limma Rsamtools rtracklayer zoo]; }; - quantro = derive2 { name="quantro"; version="1.15.0"; sha256="1r9q1kmql8fgdnljgb17simjkfdm14nn0fxmrh09ijg8640bdis4"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; }; + qsea = derive2 { name="qsea"; version="1.7.4"; sha256="1rnm4f9skig9p8i0qz9nrfm6vxnjgi67s8r2665c3c87j52r4gga"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges limma Rsamtools rtracklayer zoo]; }; + quantro = derive2 { name="quantro"; version="1.15.2"; sha256="0lf3d17b9d5gszpjknzhc5s2k8m31f8qf4k8y2lsrs7kaqr0skq0"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; }; quantsmooth = derive2 { name="quantsmooth"; version="1.47.0"; sha256="1w2gwaxy90s6laghgdhxqb0c0s93ci8g61zbrn7xjpd6af1vz1md"; depends=[quantreg]; }; - qusage = derive2 { name="qusage"; version="2.15.0"; sha256="025xjbaw1mkvh0wa656l851f1c2m4sjxqb6xvjks3fz4bwlrk2xr"; depends=[Biobase limma lsmeans nlme]; }; + qusage = derive2 { name="qusage"; version="2.15.1"; sha256="03fxcg63mlxkc3m3pj5y828spk42h3f5h8l9zcfjmf93qacal6s7"; depends=[Biobase limma lsmeans nlme]; }; qvalue = derive2 { name="qvalue"; version="2.13.0"; sha256="1g6lfgn73z68imy6qmh9s1zyniaq1wyx8jyllrk4lxpgk17i5dgh"; depends=[ggplot2 reshape2]; }; r3Cseq = derive2 { name="r3Cseq"; version="1.27.0"; sha256="13cswnxp8ikv95xb3szn7br7xm5ml3mpj365vxhaky2s1x9kxr9p"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; }; - rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.21.0"; sha256="0bgxw31ivqmzykxhrnzrswf39kxp7sj9kpi4fz8pxggjwnb59pfl"; depends=[data_table XML]; }; + rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.21.1"; sha256="15lzqw4frw59scwarzcncp1a75xaf274bfy17ypwq0y7fnvqvlh5"; depends=[data_table XML]; }; rCGH = derive2 { name="rCGH"; version="1.11.2"; sha256="10284xrdqh0pbn8a3ibwr2znf3lajnimli93lrhs4d60cna8wp9n"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; }; - rDGIdb = derive2 { name="rDGIdb"; version="1.7.0"; sha256="12c3ly2x1wc9ry514vzks20drv8q1r19sflhpnwhbc00lmh13s1k"; depends=[httr jsonlite]; }; + rDGIdb = derive2 { name="rDGIdb"; version="1.7.1"; sha256="195z5zifd48sq96rx9ayijfpqbrs5rygjsgjm42h4zylm2niasxi"; depends=[httr jsonlite]; }; rGADEM = derive2 { name="rGADEM"; version="2.29.0"; sha256="1bqzmawhz1m00zcbnvznxzvak5f1b65xalr7sgas2sbrd77lvrhr"; depends=[Biostrings BSgenome IRanges seqLogo]; }; - rGREAT = derive2 { name="rGREAT"; version="1.13.2"; sha256="18cfmvcmk60shrg2pd2qwi1s5679sbrv846vac2py29f6c7gq5zl"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; }; + rGREAT = derive2 { name="rGREAT"; version="1.13.3"; sha256="0fkcv2nz674i66yd3x34ba3897sdq96c1cns2kj7hjnv92l88qv3"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; }; rHVDM = derive2 { name="rHVDM"; version="1.47.0"; sha256="1y8dkws06j7jh6rnlq3y91bn5wy8fn2ha224mmvx4qchp6y9xcxd"; depends=[affy Biobase minpack_lm R2HTML]; }; rMAT = derive2 { name="rMAT"; version="3.31.0"; sha256="0d2hn2jjs6c5xjwf6w0m9v53bb9mfpqvmms5vnzhwh6z3jankavm"; depends=[affxparser Biobase BiocGenerics IRanges]; }; rRDP = derive2 { name="rRDP"; version="1.15.1"; sha256="0m00070c87za48a4in8bqzb3l77177jqys2ya6wv6xylmfig899j"; depends=[Biostrings]; }; @@ -1372,102 +1461,106 @@ in with self; { rTANDEM = derive2 { name="rTANDEM"; version="1.21.0"; sha256="1n7yaycgh5822j119si8i66yn0asg1mz9a9g7idiyvj8gpq54fv5"; depends=[data_table Rcpp XML]; }; rTRM = derive2 { name="rTRM"; version="1.19.0"; sha256="1x8gbrn4b80v52isxg8a5rhkwijnlx649xyipnj206ky6ihzd3hc"; depends=[AnnotationDbi DBI igraph RSQLite]; }; rTRMui = derive2 { name="rTRMui"; version="1.19.0"; sha256="0gw5yx609nzk8r8qc7q9zgkfs32s79d8v1zpw2njcb5d6figs7b1"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; }; - rWikiPathways = derive2 { name="rWikiPathways"; version="1.1.0"; sha256="0vcqrcg90npn3rmwkywnf0qnjwxw491mn0xrski70yyij2lylckg"; depends=[caTools httr RJSONIO]; }; + rWikiPathways = derive2 { name="rWikiPathways"; version="1.1.7"; sha256="180pfczj66sm1a7g7r4ykl0qv8bncq7gqp0vf6hr39jmi985shin"; depends=[caTools httr RJSONIO]; }; rain = derive2 { name="rain"; version="1.15.0"; sha256="0zrxh7bmc9x9rh6zbb0zmv3nvz6l7hqq21h4gh3rzzyjy79vw3aj"; depends=[gmp multtest]; }; rama = derive2 { name="rama"; version="1.55.0"; sha256="0kmp25yw86vqxf43br2j75svvaprz97s5nvnxxjxbjwiigbjla7h"; depends=[]; }; - ramwas = derive2 { name="ramwas"; version="1.5.0"; sha256="0g794y9xawkrfcylasjjv123rlsz1yfrdl89nrr4i99jfw7innw2"; depends=[BiocGenerics biomaRt Biostrings digest filematrix GenomicAlignments glmnet KernSmooth Rsamtools]; }; + ramwas = derive2 { name="ramwas"; version="1.5.1"; sha256="1ixis62wpg0mzrzirgyfmp3k4kglsnw0vhgd1n4mvwa3v49vlbgi"; depends=[BiocGenerics biomaRt Biostrings digest filematrix GenomicAlignments glmnet KernSmooth Rsamtools]; }; randPack = derive2 { name="randPack"; version="1.27.0"; sha256="0s7460iz01vmkf4a8g3vn6hrfx94bp5mihfyjkcv46nd9p3k6af5"; depends=[Biobase]; }; rbsurv = derive2 { name="rbsurv"; version="2.39.0"; sha256="08lh9hn97sc0rx9vmkd977kpijs6gqa6r89my7afsvmkm8v7n7ls"; depends=[Biobase survival]; }; - rcellminer = derive2 { name="rcellminer"; version="2.3.0"; sha256="0rm5azbpyfsdaqxmip7wyw8f5apwac8s6n6cm0sqdwwsslm5dsl4"; depends=[Biobase fingerprint ggplot2 gplots rcdk rcellminerData shiny stringr]; }; - readat = derive2 { name="readat"; version="1.7.0"; sha256="186hx7r5gvybvp1f6yzpi515b7hsv3a6il02hwpr8y1xdx3408nv"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_sets assertive_types Biobase data_table dplyr magrittr openxlsx pathological reshape2 stringi SummarizedExperiment testthat tidyr]; }; + rcellminer = derive2 { name="rcellminer"; version="2.3.2"; sha256="0fmg98pcv20gx5c4cbcdcs2cd1a84sg29xld5c7sa76i60ajy6ij"; depends=[Biobase fingerprint ggplot2 gplots rcdk rcellminerData shiny stringr]; }; + readat = derive2 { name="readat"; version="1.7.2"; sha256="0wskar887f6hyrp7p69z50kilwz0kb2d1f6rllbkgrchlh3zn53g"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_sets assertive_types Biobase data_table dplyr magrittr openxlsx pathological reshape2 stringi SummarizedExperiment testthat tidyr]; }; reb = derive2 { name="reb"; version="1.59.0"; sha256="0sdlhx64sh55waxj47hz9kfb6bvxrw4ycyzj5cycr1w3sk2idszc"; depends=[Biobase idiogram]; }; - recount = derive2 { name="recount"; version="1.7.2"; sha256="17cymdrkr9aiszv98qfsy7das1ain2g0g8q4f8ik7bk868ahsaj2"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; }; - recoup = derive2 { name="recoup"; version="1.9.0"; sha256="0z13mj7b5hywp5mbk0faq01k7d1mpnz2b9633h75hkh04w5260n9"; depends=[BiocGenerics biomaRt circlize ComplexHeatmap GenomicAlignments GenomicRanges ggplot2 plyr rtracklayer]; }; - regionReport = derive2 { name="regionReport"; version="1.15.1"; sha256="12mbpblgg0lf3kixi1isx92jkxxcnifhwq03ipgigrkd0iv9s7q6"; depends=[BiocStyle DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitcitations knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; }; - regioneR = derive2 { name="regioneR"; version="1.13.0"; sha256="0iy118hy66d7wina49sh7xwi0akx9hp7k98gwfjc0bpwdj7gs1h9"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer S4Vectors]; }; - regsplice = derive2 { name="regsplice"; version="1.7.0"; sha256="1gl5isfrqi0xyb4mdv7j6sb8ah4mzmwkaal1kcphjsrj8g46ba80"; depends=[edgeR glmnet limma pbapply S4Vectors SummarizedExperiment]; }; - restfulSE = derive2 { name="restfulSE"; version="1.3.1"; sha256="02jq9gjf7z70ny1bmywx39igxm29nkmc6qv1acy81gxxpsr8naih"; depends=[AnnotationDbi AnnotationHub bigrquery Biobase DBI DelayedArray dplyr ExperimentHub GO_db magrittr reshape2 rhdf5client rlang S4Vectors SummarizedExperiment]; }; + recount = derive2 { name="recount"; version="1.7.6"; sha256="03gk0h8aqzky7q1jgmn4f27cm18602m5nqbql9nyfxpbdpy9gdwb"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; }; + recoup = derive2 { name="recoup"; version="1.9.2"; sha256="0c6zd42xr7068yfnsag8xfjix83m3wa3s8fsc2dv5fz2gnmhbfm2"; depends=[BiocGenerics biomaRt circlize ComplexHeatmap GenomicAlignments GenomicRanges ggplot2 plyr rtracklayer]; }; + regionReport = derive2 { name="regionReport"; version="1.15.5"; sha256="02fhvjx5pj5hb3bdmm417rdjd8bzx81icdd8yqc4q7layhjrqb5q"; depends=[BiocStyle DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitcitations knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; }; + regioneR = derive2 { name="regioneR"; version="1.13.3"; sha256="1rmh4xq596yb8kd411j5h02b6g2rflkwy9a1g38djj7lhzihy2im"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer S4Vectors]; }; + regsplice = derive2 { name="regsplice"; version="1.7.1"; sha256="07g7jhwsb6yqhjvapr7kyqd8cwvn5jq9nrrf1ywifbf54x0kgzm1"; depends=[edgeR glmnet limma pbapply S4Vectors SummarizedExperiment]; }; + restfulSE = derive2 { name="restfulSE"; version="1.3.23"; sha256="1cpxkqnffmhj6js1a4y3k85jmrcciw1sih35akj8v6rpv4fsy7xa"; depends=[AnnotationDbi AnnotationHub bigrquery Biobase DBI DelayedArray dplyr ExperimentHub GO_db magrittr reshape2 rhdf5client rlang S4Vectors SummarizedExperiment]; }; + rexposome = derive2 { name="rexposome"; version="1.3.4"; sha256="0w5w4agdphrv935y3415hcrbgsxw27yk7h1xrjl5vk1ymkrj767z"; depends=[Biobase circlize corrplot FactoMineR ggplot2 ggrepel glmnet gplots gridExtra gtools Hmisc imputeLCMD lme4 lsr mice pryr reshape2 S4Vectors scales scatterplot3d stringr]; }; rfPred = derive2 { name="rfPred"; version="1.19.0"; sha256="0xnb68s8iw01cnxma5iqyfki4f30i4if7kxc9p0i8w1nv3jf28xj"; depends=[data_table GenomicRanges IRanges Rsamtools]; }; rgsepd = derive2 { name="rgsepd"; version="1.13.0"; sha256="128dqx7qzs9pf7ffxn94g8krkyryhcvj4wq9m1mdfj024yl4s04i"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots hash org_Hs_eg_db SummarizedExperiment]; }; - rhdf5 = derive2 { name="rhdf5"; version="2.25.4"; sha256="129jzsqfswv6vhvfypqm9wcsnm94blq2zmjcp78c1vcjxc2i4li6"; depends=[Rhdf5lib]; }; - rhdf5client = derive2 { name="rhdf5client"; version="1.3.3"; sha256="0iyhqsnfr7c9z7zk80i6i15f7sqkb28nakjxccldhn0g8xkaavq9"; depends=[DelayedArray httr rjson S4Vectors]; }; + rhdf5 = derive2 { name="rhdf5"; version="2.25.11"; sha256="02xa4pc743k7q523p8x9njzqk8j0zv5kmprx5srnmrr1r1m4am8g"; depends=[Rhdf5lib]; }; + rhdf5client = derive2 { name="rhdf5client"; version="1.3.13"; sha256="0pcppacx3n1pr67amd5y7r25sm2w9k8vhxn8k8v66ndp08i0pd9b"; depends=[DelayedArray httr R6 rjson S4Vectors]; }; riboSeqR = derive2 { name="riboSeqR"; version="1.15.0"; sha256="0cwf51cish38slfv3cqfn4rqjs8k9wwwph0n4w7wd4dh7c9p2rmn"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools seqLogo]; }; rnaSeqMap = derive2 { name="rnaSeqMap"; version="2.39.0"; sha256="07q9dblld6ns943ppjdl1xlbzhg3yvxci8v1x2kbifqwlvv2lzs6"; depends=[Biobase DBI DESeq edgeR GenomicAlignments GenomicRanges IRanges Rsamtools]; }; rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.11.0"; sha256="0r1n74x5xbp264ap9xsndiich89cv2140whi6ax179dpjs57ikaa"; depends=[RColorBrewer]; }; roar = derive2 { name="roar"; version="1.17.0"; sha256="09wmsfn4lqzj8ffqlf5z9npx4v0y3bpvxrm6b5rggc3prlq9m4qb"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; }; - rols = derive2 { name="rols"; version="2.9.1"; sha256="0lzwl32zd61cj57ndxs9y74bclfpwl7s590a81cj99kidz6sx0c3"; depends=[Biobase BiocGenerics httr jsonlite progress]; }; - ropls = derive2 { name="ropls"; version="1.13.6"; sha256="1gbjnpm5phimfgg2qfav04wc4aabvinj8gxirw9f6gp1wra0kbyr"; depends=[Biobase]; }; - rpx = derive2 { name="rpx"; version="1.17.0"; sha256="0h5s2dwnpn7qqk5wk7128agdh9av9jzxhix4xrl0nhdd3jzi202y"; depends=[RCurl xml2]; }; - rqt = derive2 { name="rqt"; version="1.7.0"; sha256="1iai2g1k7ybdlmw4r9k2zqdqq58ayggzs0gzdrn1bxmgp83v87fv"; depends=[car CompQuadForm glmnet Matrix metap pls ropls RUnit SummarizedExperiment]; }; + rols = derive2 { name="rols"; version="2.9.4"; sha256="15qvqv3gi33ihdh0nlqqrv7raqs8g5hskaz2gk4pw0v24bzh1579"; depends=[Biobase BiocGenerics httr jsonlite progress]; }; + ropls = derive2 { name="ropls"; version="1.13.8"; sha256="1ryxjnpd7q0pwi8sd2ha3jlfwkk6v4cqz2751bv952k8c9mldna7"; depends=[Biobase]; }; + rpx = derive2 { name="rpx"; version="1.17.2"; sha256="0h0y31bi5f9z64ilcsgx1bj52qwfh1rv9ar00v3xkgx0zax5aw2m"; depends=[RCurl xml2]; }; + rqt = derive2 { name="rqt"; version="1.7.2"; sha256="1nnacv0vgf9y3abrph04hmibjm08bmhi32ik7vrbr5pv5bbmdhrn"; depends=[car CompQuadForm glmnet Matrix metap pls ropls RUnit SummarizedExperiment]; }; rqubic = derive2 { name="rqubic"; version="1.27.0"; sha256="06pp8ha9va9hkr5s7dmw6xsxs55sv0cn9vwysja0n4hdbbh5fx9v"; depends=[biclust Biobase BiocGenerics]; }; rsbml = derive2 { name="rsbml"; version="2.39.0"; sha256="0ch87r9v7yxxqab81n99silsi6am7vwf1fzg43jg8x5726yz4pip"; depends=[BiocGenerics graph]; }; - rtracklayer = derive2 { name="rtracklayer"; version="1.41.3"; sha256="1z8g303smfg3c3rax3c9fx4017fy9ch5sbvqsiincykigjsrn21b"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; }; - runibic = derive2 { name="runibic"; version="1.3.1"; sha256="1l1rywk4lhgssmysd8998gd1wr5ms08s2s8skq2ss6qcxp1qrnvi"; depends=[biclust Rcpp SummarizedExperiment testthat]; }; + rtracklayer = derive2 { name="rtracklayer"; version="1.41.8"; sha256="029qzy68il0mn7bkjhqdainl93a6v6k044ihgg5mndyhhhadjv03"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl Rsamtools S4Vectors XML XVector zlibbioc]; }; + runibic = derive2 { name="runibic"; version="1.3.3"; sha256="038afzgh06f908m1rlr0v58vfgm97q3shd174772k9rllzqr0q0j"; depends=[biclust Rcpp SummarizedExperiment testthat]; }; sRAP = derive2 { name="sRAP"; version="1.21.0"; sha256="1mfailybmpa5ikc372qcfp57rnsksv6kn4x48bf6c0g5vln2kpjh"; depends=[gplots pls qvalue ROCR WriteXLS]; }; sSeq = derive2 { name="sSeq"; version="1.19.0"; sha256="19d7xj3bqvvlxl23i08ab8ja53342nzi658a1f7xzf7khgp58fg9"; depends=[caTools RColorBrewer]; }; safe = derive2 { name="safe"; version="3.21.0"; sha256="12h9d3dradnnkmhxz94d1b191q6xvx74nvp9y9y46yla7rxqpzma"; depends=[AnnotationDbi Biobase SparseM]; }; sagenhaft = derive2 { name="sagenhaft"; version="1.51.0"; sha256="0mvj275rrqvz53fsv48c5gd3lzxmwh036353bmw7jswb1mrrv5qz"; depends=[SparseM]; }; - samExploreR = derive2 { name="samExploreR"; version="1.5.0"; sha256="1gnlrkvyzw36m3da67vz7g8cfrrk4lg0yg2b9svhf3rjhfq6sjvv"; depends=[edgeR ggplot2 RNAseqData_HNRNPC_bam_chr14 Rsubread]; }; - sampleClassifier = derive2 { name="sampleClassifier"; version="1.5.0"; sha256="08lr8b0dg489mfiljnpqdryflim8m902b66fl8qkkn5hm842dm22"; depends=[annotate e1071 ggplot2 MGFM MGFR]; }; + samExploreR = derive2 { name="samExploreR"; version="1.5.1"; sha256="1qzi9vn2hj9ph23mf8v0m6m587qisqvp0fmvkavxm8v3y07mcnpk"; depends=[edgeR ggplot2 RNAseqData_HNRNPC_bam_chr14 Rsubread]; }; + sampleClassifier = derive2 { name="sampleClassifier"; version="1.5.1"; sha256="1a4y3nnibjkv51i0m1qpj8mb675r9gz9zdpyra18c19ga245bwih"; depends=[annotate e1071 ggplot2 MGFM MGFR]; }; sangerseqR = derive2 { name="sangerseqR"; version="1.17.0"; sha256="02v0khp8dksvj8h0p3py5cdxwgbla9hv60mrj6ay2d6yyv2w0vz6"; depends=[Biostrings shiny]; }; sapFinder = derive2 { name="sapFinder"; version="1.19.0"; sha256="0f0k3afijnj0h6bh46cnkm3gajdsvngamcw2q5xbdrafidrk6npm"; depends=[pheatmap Rcpp rTANDEM]; }; savR = derive2 { name="savR"; version="1.19.0"; sha256="1lzlrpv244pnwmf3347r7l5vwz0cd4hlm9nvlpdlvv8glvf7v4ay"; depends=[ggplot2 gridExtra reshape2 scales XML]; }; scDD = derive2 { name="scDD"; version="1.5.0"; sha256="1s2a4nz3ys4vllk9dphwskqrw2bb9shkqx4bismprn0b7qcmnv9j"; depends=[arm BiocParallel EBSeq fields ggplot2 mclust outliers S4Vectors scran SingleCellExperiment SummarizedExperiment]; }; - scFeatureFilter = derive2 { name="scFeatureFilter"; version="1.1.0"; sha256="0d4rrrk4fdrnrf7rdqwz915sg7m81w0fzfrrnjzpsncpwzkqa1pg"; depends=[dplyr ggplot2 magrittr rlang tibble]; }; - scPipe = derive2 { name="scPipe"; version="1.3.7"; sha256="1gvpkcxjal81r5vh4f16ll9p0nj70iyp8gp5c9rkg2pr0p28ryx3"; depends=[AnnotationDbi BiocGenerics biomaRt GGally ggplot2 MASS mclust org_Hs_eg_db org_Mm_eg_db Rcpp reshape Rhtslib robustbase S4Vectors scales SingleCellExperiment SummarizedExperiment testthat zlibbioc]; }; - scater = derive2 { name="scater"; version="1.9.6"; sha256="0yxw73fvxyvq99lnpwp4j4mf2jy6zkyw934ql2y2avbnyclj4id5"; depends=[beachmat Biobase BiocGenerics data_table DelayedArray DelayedMatrixStats dplyr ggbeeswarm ggplot2 limma Matrix plyr Rcpp reshape2 rhdf5 Rhdf5lib rjson S4Vectors SingleCellExperiment SummarizedExperiment tximport viridis]; }; + scFeatureFilter = derive2 { name="scFeatureFilter"; version="1.1.1"; sha256="0xsbyqlflmphrdc0rqbgjyc93fmm2b747wn2lswq24r6g87084cs"; depends=[dplyr ggplot2 magrittr rlang tibble]; }; + scPipe = derive2 { name="scPipe"; version="1.3.8"; sha256="0c250q77rwcmns0m5px7485axbrflb7xmkrw58fxyzn58i13y3bc"; depends=[AnnotationDbi BiocGenerics biomaRt GGally ggplot2 MASS mclust org_Hs_eg_db org_Mm_eg_db Rcpp reshape Rhtslib robustbase S4Vectors scales SingleCellExperiment SummarizedExperiment testthat zlibbioc]; }; + scater = derive2 { name="scater"; version="1.9.24"; sha256="062afh547brk3jxjxkyapz66agkdyvsn62ppx1n2qcpbhxlpppnd"; depends=[beachmat BiocGenerics BiocParallel DelayedArray DelayedMatrixStats dplyr ggbeeswarm ggplot2 Matrix plyr Rcpp reshape2 Rhdf5lib S4Vectors SingleCellExperiment SummarizedExperiment viridis]; }; scde = derive2 { name="scde"; version="2.9.0"; sha256="1zmhbjdy9v2v11q261l7gwjm77qpiyqdskgbkcaxf7a65wbzs90r"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; }; scfind = derive2 { name="scfind"; version="1.3.0"; sha256="08xkvmjd6p6vsnfk7a5y4586b9r3ap7l9ig0g6cd6cj8pjhvf51b"; depends=[bit dplyr hash Rcpp reshape2 SingleCellExperiment SummarizedExperiment]; }; scmap = derive2 { name="scmap"; version="1.3.0"; sha256="0pnflc49ysq7sxcg0ddcapi65vfjq3zl9pnz119hjr6avp8sjmhy"; depends=[Biobase BiocGenerics dplyr e1071 ggplot2 googleVis matrixStats proxy randomForest Rcpp RcppArmadillo reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; }; - scone = derive2 { name="scone"; version="1.5.0"; sha256="0n49j4z48zfrrj7a9nv538vyi5611w5r68rw9w99c28k2n6lvril"; depends=[BiocParallel boot class cluster compositions diptest edgeR fpc gplots hexbin limma matrixStats mixtools rARPACK RColorBrewer rhdf5 RUVSeq SummarizedExperiment]; }; + scmeth = derive2 { name="scmeth"; version="1.1.8"; sha256="1fkf2pxbnhl992cql5nd73qq0kqzhvhl8g7rjfyx2zlfnb0a2m22"; depends=[AnnotationHub annotatr Biostrings BSgenome bsseq DelayedArray DT GenomeInfoDb GenomicRanges HDF5Array knitr reshape2 rmarkdown SummarizedExperiment]; }; + scone = derive2 { name="scone"; version="1.5.1"; sha256="0sqnwq34ixlpaq8zrpqjwvpfx985yzyc7wdymfkwfy2ysclrcbn6"; depends=[aroma_light BiocParallel boot class cluster compositions diptest edgeR fpc gplots hexbin limma matrixStats mixtools rARPACK RColorBrewer rhdf5 RUVSeq SummarizedExperiment]; }; scoreInvHap = derive2 { name="scoreInvHap"; version="1.3.1"; sha256="1nysi4blc9rxfsq4kwyyq9nbzdww7xfwgrcw8czvnfca59dbfgdq"; depends=[BiocParallel Biostrings GenomicRanges snpStats SummarizedExperiment VariantAnnotation]; }; - scran = derive2 { name="scran"; version="1.9.10"; sha256="1c55i0iq6dfhxdmnps440d0i1lsidj2wx0v2a476lks4hi32bwsf"; depends=[beachmat BiocGenerics BiocParallel DelayedArray DelayedMatrixStats dynamicTreeCut edgeR igraph kmknn limma Matrix Rcpp Rhdf5lib S4Vectors scater SingleCellExperiment statmod SummarizedExperiment]; }; + scran = derive2 { name="scran"; version="1.9.39"; sha256="174s3jymh8w1gbaq60m4lwhk038bfzrwva2a8xry3ampns818a6b"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel DelayedArray DelayedMatrixStats dynamicTreeCut edgeR igraph limma Matrix Rcpp Rhdf5lib S4Vectors scater SingleCellExperiment statmod SummarizedExperiment]; }; + scruff = derive2 { name="scruff"; version="0.99.39"; sha256="1za3d79p6cm19m3xqwbfgvrnfhjrr3j54s5vqhaaxxxvj9xbpv06"; depends=[AnnotationDbi BiocGenerics BiocParallel Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 ggthemes plyr refGenome Rsamtools S4Vectors scales ShortRead SingleCellExperiment stringdist SummarizedExperiment]; }; scsR = derive2 { name="scsR"; version="1.17.0"; sha256="1ppw53nl05rfs7jkgr464pa24yrczlvh7yfgmn5apd3yxbmf9i9w"; depends=[BiocGenerics Biostrings ggplot2 hash IRanges plyr RColorBrewer sqldf STRINGdb]; }; - segmentSeq = derive2 { name="segmentSeq"; version="2.15.0"; sha256="07cm7314vjhsara5ngs3j0gi7fjbdvn51r6s7ifxm6vij43ivpqs"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; - semisup = derive2 { name="semisup"; version="1.5.1"; sha256="170x6s5q1lja64p4ldpravlaal8vs7rzqk8lyvrydsg02ss7vj7h"; depends=[SummarizedExperiment VGAM]; }; - seq2pathway = derive2 { name="seq2pathway"; version="1.13.0"; sha256="03gbim70cnym2ga6zynj67r9ad1j4hrgydzzsi8r1nykkmjlk5lj"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; }; - seqCAT = derive2 { name="seqCAT"; version="1.3.3"; sha256="0s3r550w41x5kdzqjnk2ypp2fn3sd8qn8b85s4h8rdzyc8brp0d8"; depends=[dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges lazyeval S4Vectors scales SummarizedExperiment tidyr VariantAnnotation]; }; + segmentSeq = derive2 { name="segmentSeq"; version="2.15.1"; sha256="10qjyzzi4vr43p66rgpxkm5hlgfpg6s76g19vdyzs8lh0mn4shfw"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; }; + semisup = derive2 { name="semisup"; version="1.5.3"; sha256="13xmxl1915hk000l2kg120h4cqyw1372j2b92vfz5mn45ngmg99k"; depends=[SummarizedExperiment VGAM]; }; + seq2pathway = derive2 { name="seq2pathway"; version="1.13.2"; sha256="15fvc4dqn7adl3jsphin60krbm29mbm3w8000plcmk8n5bxdxqvj"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; }; + seqCAT = derive2 { name="seqCAT"; version="1.3.7"; sha256="10c5y3d63zk6zsyjx38srw73xj03nk7apa2p81z91jwwmva2ab2m"; depends=[dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges lazyeval S4Vectors scales SummarizedExperiment tidyr VariantAnnotation]; }; seqCNA = derive2 { name="seqCNA"; version="1.27.0"; sha256="03zxkdcvxgjjhciv1w9l9gdj21ljqrw3c9cgkf2pqp3jk0swpaa7"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; }; seqLogo = derive2 { name="seqLogo"; version="1.47.0"; sha256="1hqfgxd7yvh7lm5q3qfhlkiy0pq5ffxls317miivsgid28shwmwk"; depends=[]; }; seqPattern = derive2 { name="seqPattern"; version="1.13.0"; sha256="1xm7f3z29ahyiiy8586yfy5m4cqalws8hsyp8yc9xybw0mwdpyhg"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; }; seqTools = derive2 { name="seqTools"; version="1.15.0"; sha256="0qnj79xhgflhjcrd2n61fmx099q83iil8hy6pq7jzhnzhg4572pj"; depends=[zlibbioc]; }; seqbias = derive2 { name="seqbias"; version="1.29.0"; sha256="1lv6wcqzlr40jmwac9s07ixx9vyikkc5a8f5wjmip9gglyy7m5f4"; depends=[Biostrings GenomicRanges Rsamtools zlibbioc]; }; seqcombo = derive2 { name="seqcombo"; version="1.3.0"; sha256="1l4n2472kr4kimf4aq8v5whqwjpzwbkisfrf74wjljdj43903dr2"; depends=[Biostrings cowplot dplyr ggplot2 igraph magrittr rvcheck]; }; - seqplots = derive2 { name="seqplots"; version="1.19.0"; sha256="1qx7b2jzhprncgff4n88w7kq10hp98a6bcky0lq4z8rjf3ksaph7"; depends=[Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 Rsamtools RSQLite rtracklayer S4Vectors shiny]; }; - seqsetvis = derive2 { name="seqsetvis"; version="1.1.2"; sha256="0az4s9v69b57fnisc5ln827da7cyhx16wwzh5cx8qqhkffzn323s"; depends=[data_table eulerr GenomicRanges ggplot2 IRanges limma png RColorBrewer Rsamtools rtracklayer S4Vectors]; }; - sesame = derive2 { name="sesame"; version="0.99.3"; sha256="1dz1jx4cmpbis0h3mmk5p7h6ybprsrnvdbzcv6kj0h0q31al2rg9"; depends=[DNAcopy GenomicRanges ggplot2 illuminaio IRanges MASS preprocessCore R6 randomForest sesameData wheatmap]; }; - sevenC = derive2 { name="sevenC"; version="1.1.0"; sha256="05h05y7nkq73igsv54znawrzav7ijvrzwqsbpw8di43fah1klpg7"; depends=[BiocGenerics boot data_table GenomeInfoDb GenomicRanges InteractionSet IRanges purrr readr rtracklayer S4Vectors]; }; - sevenbridges = derive2 { name="sevenbridges"; version="1.11.0"; sha256="1c3mj8k5fscj4hcg7rm12zjfp9hbwlp9k83hi8ijq55iw66jp399"; depends=[curl docopt dplyr httr jsonlite miniUI objectProperties rstudioapi S4Vectors shiny stringr uuid yaml]; }; - shinyMethyl = derive2 { name="shinyMethyl"; version="1.17.0"; sha256="0cs3s08mijpcz598d07as3yl0fcw3x5q6q1lxmq29x36kmfz6yrg"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; + seqplots = derive2 { name="seqplots"; version="1.19.3"; sha256="0drjn6l80xqy3lij4qzg48chrwi0sjhv0xnqgg9m6qyq9xb7hy5l"; depends=[BiocManager Biostrings BSgenome class DBI digest DT fields GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges jsonlite kohonen plotrix RColorBrewer reshape2 Rsamtools RSQLite rtracklayer S4Vectors shiny]; }; + seqsetvis = derive2 { name="seqsetvis"; version="1.1.7"; sha256="01yd5lbkad79s274yc0byfvi4pp51b8ikrdnrza9r6jffaalzi60"; depends=[data_table eulerr GenomicRanges ggplot2 IRanges limma png RColorBrewer Rsamtools rtracklayer S4Vectors]; }; + sesame = derive2 { name="sesame"; version="0.99.7"; sha256="19l3cl5202aysf8bahhb4sm53q3x2jlz424ykw9zdf0ab9m3zbnc"; depends=[DNAcopy GenomicRanges ggplot2 illuminaio IRanges MASS preprocessCore R6 randomForest S4Vectors sesameData wheatmap]; }; + sevenC = derive2 { name="sevenC"; version="1.1.4"; sha256="16x95kb8264r5z55r635lyy13i37jsnyghmn27mw4wj8acdgv6gb"; depends=[BiocGenerics boot data_table GenomeInfoDb GenomicRanges InteractionSet IRanges purrr readr rtracklayer S4Vectors]; }; + sevenbridges = derive2 { name="sevenbridges"; version="1.11.5"; sha256="07pndfkcx4ixh5sk2hq64r5xzz2b6h26km50dk4pizj03lpcgalr"; depends=[curl docopt dplyr httr jsonlite miniUI objectProperties rstudioapi S4Vectors shiny stringr uuid yaml]; }; + shinyMethyl = derive2 { name="shinyMethyl"; version="1.17.1"; sha256="18s9m1yxqvpzqaq87c09k5wvjxpxijz6b9gi7nr1b4jxfglkxrdl"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; }; shinyTANDEM = derive2 { name="shinyTANDEM"; version="1.19.0"; sha256="0yvf4rxpki7xb7f7yckxrm7ycsx2clqn13smc2m7ihdyvg5kw941"; depends=[mixtools rTANDEM shiny xtable]; }; - sigFeature = derive2 { name="sigFeature"; version="0.99.4"; sha256="011drdrq1pj37jbp8289rws1nmhbyivghbfpkirj6g4wc6pnpghn"; depends=[BiocParallel biocViews e1071 Matrix nlme openxlsx pheatmap RColorBrewer SparseM SummarizedExperiment]; }; + sigFeature = derive2 { name="sigFeature"; version="0.99.5"; sha256="08fs7pa4r4gbsg8j1f630lz9b0p4z4cq9r54akv0ix5q1mi71n2p"; depends=[BiocParallel biocViews e1071 Matrix nlme openxlsx pheatmap RColorBrewer SparseM SummarizedExperiment]; }; sigPathway = derive2 { name="sigPathway"; version="1.49.0"; sha256="0fzqf17xqb0f2af9lz392l656naddann4wsxn233d28dajdvw5rx"; depends=[]; }; sigaR = derive2 { name="sigaR"; version="1.29.0"; sha256="0lmv6m0rb7pnrqp6gd8klni3vd0rb98xscfx7qb5xpkihqcnya9s"; depends=[Biobase CGHbase corpcor igraph limma marray MASS mvtnorm penalized quadprog snowfall]; }; siggenes = derive2 { name="siggenes"; version="1.55.0"; sha256="1lfw6ny0s76jcypqin49raz1zrbl1rwds3646c8h52rd37c4hdx0"; depends=[Biobase multtest]; }; - sights = derive2 { name="sights"; version="1.7.0"; sha256="0ygld23zpqqa7xalbq1kyf6x03kpqbmicr4hrysjk54h3r5pv56y"; depends=[ggplot2 lattice MASS qvalue reshape2]; }; - signeR = derive2 { name="signeR"; version="1.7.1"; sha256="1xmz6b33n0idby69739mm8frv4l95g8rsdcp98dg6fhpf2s49ky3"; depends=[BiocGenerics Biostrings class GenomicRanges nloptr NMF PMCMR Rcpp RcppArmadillo VariantAnnotation]; }; - signet = derive2 { name="signet"; version="1.1.0"; sha256="1rdmq4x0xf13hl54f2nbnckz8nci9391g6l00zznv1vzykp6awdm"; depends=[graph igraph RBGL]; }; + sights = derive2 { name="sights"; version="1.7.1"; sha256="05zny8xlsxzyp9bbv4jlgrpkmy0ppzqf97809ic6myfch547x7gp"; depends=[ggplot2 lattice MASS qvalue reshape2]; }; + signeR = derive2 { name="signeR"; version="1.7.2"; sha256="1ranfb4kik0k6cpi8zhsnqhvccrlizrkrijcp1yzhhaq5w33xj5b"; depends=[BiocGenerics Biostrings class GenomicRanges nloptr NMF PMCMR Rcpp RcppArmadillo VariantAnnotation]; }; + signet = derive2 { name="signet"; version="1.1.1"; sha256="0fcrwsimxx9j7m5x7civv9qrlcgnn6dyb7kcblsfxw6lidqhv59n"; depends=[graph igraph RBGL]; }; sigsquared = derive2 { name="sigsquared"; version="1.13.0"; sha256="11bjd0bq2kf4inkybx7hkf970ma8rhwvagrlwxnxafh8nzw5amn8"; depends=[Biobase survival]; }; similaRpeak = derive2 { name="similaRpeak"; version="1.13.0"; sha256="1lgs161banaxsi22ydgmw1jpf04h7js92sqzir5v7ms0h12nym15"; depends=[R6]; }; simpleaffy = derive2 { name="simpleaffy"; version="2.57.0"; sha256="0yc44svjmh2vr1z3a77nvmas7kfcl0p6rjygq6ax477rvzldw7rq"; depends=[affy Biobase BiocGenerics gcrma genefilter]; }; - simulatorZ = derive2 { name="simulatorZ"; version="1.15.0"; sha256="1x90bakarcp01h72536yr0ks2w3a64l0lwvdvka8whwm72sh8255"; depends=[Biobase BiocGenerics CoxBoost gbm GenomicRanges Hmisc IRanges S4Vectors SummarizedExperiment survival]; }; - sincell = derive2 { name="sincell"; version="1.13.0"; sha256="0mqm5qrb5nrcpigpvkjvhs0fh386x9lm6p5ns1vl38gvdq9yqvi3"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; }; - singleCellTK = derive2 { name="singleCellTK"; version="1.1.5"; sha256="180klrpaq8dz484xpd76aif2n5jyqxi4l0lr969v0yby9hn9jvyq"; depends=[AnnotationDbi ape Biobase circlize cluster colourpicker ComplexHeatmap data_table DelayedArray DESeq2 DT ggplot2 ggtree gridExtra GSVA GSVAdata limma MAST matrixStats multtest plotly RColorBrewer reshape2 Rtsne S4Vectors shiny shinyalert shinyjs SingleCellExperiment SummarizedExperiment sva]; }; - singscore = derive2 { name="singscore"; version="1.1.0"; sha256="1n21cikl874xhbx2c0nd678p53s6gvavih3dz2cbm1l1mprn5gx1"; depends=[Biobase BiocParallel edgeR ggplot2 ggrepel ggsci GSEABase magrittr matrixStats plotly plyr RColorBrewer reshape SummarizedExperiment tidyr]; }; + simulatorZ = derive2 { name="simulatorZ"; version="1.15.1"; sha256="16vzgni41r2jj8g8lbf3hh7r7202j0zq77shdaivrfzas19gaxwc"; depends=[Biobase BiocGenerics CoxBoost gbm GenomicRanges Hmisc SummarizedExperiment survival]; }; + sincell = derive2 { name="sincell"; version="1.13.2"; sha256="1h43wmx7l2sl9ka9lklqxfd35zkjbxvwsza979vxp6c8j8plp03g"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; }; + singleCellTK = derive2 { name="singleCellTK"; version="1.1.26"; sha256="1caw8cyw9f0ky3mj1fsk5lfgb4v0g3ghqb0l32j70q1r1yipdl87"; depends=[AnnotationDbi ape Biobase circlize cluster colourpicker ComplexHeatmap data_table DelayedArray DESeq2 DT enrichR ggplot2 ggtree gridExtra GSVA GSVAdata limma MAST matrixStats multtest plotly RColorBrewer reshape2 Rtsne S4Vectors shiny shinyalert shinycssloaders shinyjs SingleCellExperiment SummarizedExperiment sva]; }; + singscore = derive2 { name="singscore"; version="1.1.1"; sha256="12qqx0xnjza2rlyy1isq8mp28baphmb5yld3av5wvackyn0mwmf7"; depends=[Biobase BiocParallel edgeR ggplot2 ggrepel ggsci GSEABase magrittr matrixStats plotly plyr RColorBrewer reshape SummarizedExperiment tidyr]; }; sizepower = derive2 { name="sizepower"; version="1.51.0"; sha256="0g0f5z0ccypk7m81b2nhrrj86fv1fin96qm8wba2j6ib2wf0p4np"; depends=[]; }; - skewr = derive2 { name="skewr"; version="1.13.1"; sha256="0kgs9xf1609y0na5d9lrl6gj3rrpraagbhnhh9iq3p5b0r1ad92m"; depends=[IlluminaHumanMethylation450kmanifest methylumi minfi mixsmsn RColorBrewer S4Vectors wateRmelon]; }; - slalom = derive2 { name="slalom"; version="1.3.0"; sha256="0b68dq85h3rq0q4lbiv7zv4wg1prf79kh96m06hg9dp6336wy60w"; depends=[BH ggplot2 GSEABase Rcpp RcppArmadillo rsvd SingleCellExperiment SummarizedExperiment]; }; - slingshot = derive2 { name="slingshot"; version="0.99.8"; sha256="0yafvan6py8m4xnhx89hipzv4kbyviivxgn07mp74falci5f9mxw"; depends=[ape clusterExperiment igraph matrixStats princurve rgl SingleCellExperiment SummarizedExperiment]; }; - slinky = derive2 { name="slinky"; version="0.99.18"; sha256="09074wzn1534x76fczfcj6jl94vgv33yq3vhzsv1m342kwqn3mi5"; depends=[curl dplyr foreach httr jsonlite readr rhdf5 SummarizedExperiment tidyr]; }; + skewr = derive2 { name="skewr"; version="1.13.2"; sha256="01ks1ir4sclf2gpwjn0mahxg9iz9iz66axxni190x7gnn076byc4"; depends=[IlluminaHumanMethylation450kmanifest methylumi minfi mixsmsn RColorBrewer S4Vectors wateRmelon]; }; + slalom = derive2 { name="slalom"; version="1.3.1"; sha256="0qjw9zqyxnm6s6glw5j9iaqalnb5rbnrzkmwha2gswq9g6jd803n"; depends=[BH ggplot2 GSEABase Rcpp RcppArmadillo rsvd SingleCellExperiment SummarizedExperiment]; }; + slingshot = derive2 { name="slingshot"; version="0.99.13"; sha256="0w7ii3npq0qgjlszmsmn82sks9rdavhzqvxnn3d7p6c5y5bhz51j"; depends=[ape clusterExperiment igraph matrixStats princurve rgl SingleCellExperiment SummarizedExperiment]; }; + slinky = derive2 { name="slinky"; version="0.99.20"; sha256="1k41hw11wv9lnwkfbfbwdcajfac0sm0c7cspk8iwnkpzkj2qns8c"; depends=[curl dplyr foreach httr jsonlite readr rhdf5 SummarizedExperiment tidyr]; }; snapCGH = derive2 { name="snapCGH"; version="1.51.0"; sha256="0qfkc3sa8inlnviw5wx36nyy71b59xas9rqsmfb4j32nxdhqj64p"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; }; snm = derive2 { name="snm"; version="1.29.0"; sha256="052mayih2hdgsgklqhvzmvnvx82ch8q4jvpx8ch5rp4k4g0qlqyj"; depends=[corpcor lme4]; }; snpStats = derive2 { name="snpStats"; version="1.31.0"; sha256="1pxdf5qnibp6szwsllcayqxm9164yl30awfizlv6jmphfkah2i35"; depends=[BiocGenerics Matrix survival zlibbioc]; }; soGGi = derive2 { name="soGGi"; version="1.13.0"; sha256="1xg6yaprmafl861g66j5pymlg1hpjanyibyi3zkrd15avvxw23g9"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; }; sparseDOSSA = derive2 { name="sparseDOSSA"; version="1.5.0"; sha256="15vpj6v1x84zfy7vblhkm1vsv8hp5qa0fhfgfxbnzc5v28g1g41h"; depends=[MASS MCMCpack optparse tmvtnorm]; }; + sparsenetgls = derive2 { name="sparsenetgls"; version="0.99.7"; sha256="05n4c3gic10hy68kkc8mvh7d51sfbzvr8wr04y160pmlgrjslps4"; depends=[glmnet huge MASS Matrix parcor]; }; specL = derive2 { name="specL"; version="1.15.0"; sha256="1xdfsvq7i9g2pbr0fh0awdwvl3j5ggk1r0n5bxhq7s2p4kjppxc6"; depends=[DBI protViz RSQLite seqinr]; }; spikeLI = derive2 { name="spikeLI"; version="2.41.0"; sha256="1wx57idxn0wbg9mcfxdydcs5fbxmarsvv4hjcp62r5dpp4ymhcsb"; depends=[]; }; spkTools = derive2 { name="spkTools"; version="1.37.0"; sha256="12nwaifk726dr0lh6yf8xaxdmhlybiy88fwc1qypm3kvw6jff6ma"; depends=[Biobase gtools RColorBrewer]; }; - splatter = derive2 { name="splatter"; version="1.5.1"; sha256="0anp2ipvagv2vfhnk0yzldmn9s1z3liqmmqrs23s1yfi9dasdgbs"; depends=[akima BiocGenerics BiocParallel checkmate crayon edgeR fitdistrplus ggplot2 locfit matrixStats scales scater SingleCellExperiment SummarizedExperiment]; }; + splatter = derive2 { name="splatter"; version="1.5.8"; sha256="1bcjrywp49inr59xc01c7iz925wm2jpghx0anj97w08w0z5pn59s"; depends=[akima BiocGenerics BiocParallel checkmate crayon edgeR fitdistrplus ggplot2 locfit matrixStats scales scater SingleCellExperiment SummarizedExperiment]; }; spliceSites = derive2 { name="spliceSites"; version="1.29.0"; sha256="1ivw3zsy5jggacvcby2nx9g9h0r1vvj331qpxxnvzajp9j0187yq"; depends=[Biobase BiocGenerics Biostrings doBy IRanges rbamtools refGenome seqLogo]; }; splicegear = derive2 { name="splicegear"; version="1.53.0"; sha256="15bc3wmz3rz2jipgfj51bj2shr5cy941vnzxnk277yzh5wvz9hvc"; depends=[annotate Biobase XML]; }; splineTimeR = derive2 { name="splineTimeR"; version="1.9.0"; sha256="114c641vyi585yl11czkq5n8gl01q6h8q34g427sj7aspqpf8lkc"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; }; @@ -1477,40 +1570,45 @@ in with self; { sscore = derive2 { name="sscore"; version="1.53.0"; sha256="0p6klmcl2zd4i8qmmqj043p310grjmi6b2d610wanas03f0jdv71"; depends=[affy affyio]; }; sscu = derive2 { name="sscu"; version="2.11.0"; sha256="0hnzxyyp82psjddh97kw3g533aiczkji858jl1xqi1kbr02avwc0"; depends=[BiocGenerics Biostrings seqinr]; }; ssize = derive2 { name="ssize"; version="1.55.0"; sha256="061gpsj4dlzxii5ar3rdbc0kpvwby9639l3pk8vfslvcbl290w9f"; depends=[gdata xtable]; }; - ssviz = derive2 { name="ssviz"; version="1.15.0"; sha256="18yz1jy0rl4r7ws21kyl1rjix81jkrqbqhqxgn9qf7zsssynxjf9"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; }; + ssviz = derive2 { name="ssviz"; version="1.15.1"; sha256="0q7xzn5xy8xx660711klssbi996218yvi9map04qinb9n60h0bbw"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; }; staRank = derive2 { name="staRank"; version="1.23.0"; sha256="1gqvfbs15hdg7fkz6yxjxwn227am7lj372yhiiadgm629bwgcyxi"; depends=[cellHTS2]; }; - stageR = derive2 { name="stageR"; version="1.3.25"; sha256="0gq5j7an4m0npc7vx4p8csiwhsdhx9p48gfjp3gds2jjrlnrpsc0"; depends=[SummarizedExperiment]; }; - statTarget = derive2 { name="statTarget"; version="1.11.0"; sha256="06cwz5mwlc580bj2pqli08a6ia4q68d792jx0ssjhk6ggh58czqp"; depends=[gWidgets2 gWidgets2RGtk2 impute pdist pls plyr randomForest ROC rrcov]; }; + stageR = derive2 { name="stageR"; version="1.3.28"; sha256="1k7by1vds39xyxn3yas181si96v8q8rqxwv34b12ihsb4z7nsxpi"; depends=[SummarizedExperiment]; }; + statTarget = derive2 { name="statTarget"; version="1.11.7"; sha256="06vvha2dp1wf3lbpxxf2p4w1jvicd7fcicc525km7qkw9wp7bl5j"; depends=[impute pdist pls plyr randomForest ROC rrcov]; }; stepNorm = derive2 { name="stepNorm"; version="1.53.0"; sha256="1iq4kv3dj8nr9nqd4nnrndss4ypc87a9pl389ha9q671ifqahaii"; depends=[marray MASS]; }; - subSeq = derive2 { name="subSeq"; version="1.11.0"; sha256="0grwj60ax5i9z3bg04wi73pq9qx5mizldc059ja23f4rkk4nq7vg"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; - supraHex = derive2 { name="supraHex"; version="1.19.0"; sha256="0m4plhy7v0rfxr8ysndyqmd1x9nbf2y3hbka5gvs3zmi45wd4rds"; depends=[ape hexbin MASS]; }; - survcomp = derive2 { name="survcomp"; version="1.31.0"; sha256="0r95jgddlvgx61jwsjgdqb2npm4mi19jyrqw2349h3bds6w1r840"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; - sva = derive2 { name="sva"; version="3.29.0"; sha256="0xrqhnayir6c3hz7yw35rlscgbv6hp0s798v5qmlgdfk4s2x1sq4"; depends=[BiocParallel genefilter limma matrixStats mgcv]; }; + strandCheckR = derive2 { name="strandCheckR"; version="0.99.15"; sha256="02g18vb3adnk5vd5khpi61whall2vrpj9ghwf7dh43d37q7x3kz9"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges magrittr reshape2 Rsamtools S4Vectors stringr TxDb_Hsapiens_UCSC_hg38_knownGene]; }; + subSeq = derive2 { name="subSeq"; version="1.11.1"; sha256="1xhfxccbdgzy8k3y41vjr7pi42z7lyffvyrfa6w24dvyqxbg5cb0"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; }; + supraHex = derive2 { name="supraHex"; version="1.19.1"; sha256="0gkp192jg1xnpy8g320hr89qd1w55dlbc3lir3mmx1yyfcdmiclv"; depends=[ape hexbin MASS]; }; + survcomp = derive2 { name="survcomp"; version="1.31.2"; sha256="029fzp9gpmcrswyd9347kghg1swqkwvi886q4hqffrddwm7dx4a6"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; }; + sva = derive2 { name="sva"; version="3.29.1"; sha256="0864qxajs9r26x7051hfnf9ns813j8v1l7wgkwjndk8i4h0bbchg"; depends=[BiocParallel genefilter limma matrixStats mgcv]; }; swfdr = derive2 { name="swfdr"; version="1.7.0"; sha256="1bnqmz6vcj79j6cp15gla9lmsa3d96m790f5yl9vffbcj48n0rlc"; depends=[dplyr ggplot2 reshape2]; }; - switchBox = derive2 { name="switchBox"; version="1.17.0"; sha256="01bx0ij8ylk0r1hn73mq2dhf07mw8z44bw3mhrydhr8byp0rqz0c"; depends=[gplots pROC]; }; - switchde = derive2 { name="switchde"; version="1.7.0"; sha256="0kicwjsm5k7glcqp3q19aq2cqdyh3s6jblzp836xgygwxm1yab2m"; depends=[dplyr ggplot2 SingleCellExperiment SummarizedExperiment]; }; - synapter = derive2 { name="synapter"; version="2.5.1"; sha256="0nmkyza5a7lzmdpv50s7zn1gd30w4xvjlxaycg8id1n2cjzazq75"; depends=[Biobase Biostrings cleaver knitr lattice MSnbase multtest qvalue RColorBrewer readr rmarkdown]; }; + switchBox = derive2 { name="switchBox"; version="1.17.1"; sha256="06k771nrdzmr8w5k9d5a7b83bwvnahwahdmx5q4cg7n6la1yll91"; depends=[gplots pROC]; }; + switchde = derive2 { name="switchde"; version="1.7.1"; sha256="14n3h4afr3sfv08vxip3i8hnn77npcwvhrfg759da8qaqmyb9dky"; depends=[dplyr ggplot2 SingleCellExperiment SummarizedExperiment]; }; + synapter = derive2 { name="synapter"; version="2.5.2"; sha256="04gxig9cya85xha19zrgqh8hkl43nhpdgvhxh7kl2pnfgx0q82nf"; depends=[Biobase Biostrings cleaver knitr lattice MSnbase multtest qvalue RColorBrewer readr rmarkdown]; }; synergyfinder = derive2 { name="synergyfinder"; version="1.7.0"; sha256="0v76jdh7dh9hhjgxfbls529lrv1wkjvaym39s7ahm3p1njycx05d"; depends=[drc ggplot2 gplots gridBase lattice nleqslv reshape2 SpatialExtremes]; }; synlet = derive2 { name="synlet"; version="1.11.0"; sha256="0ijhssagav4hw7nm8x5157crdv4i8yhikrk6qf9w134lkkl0mviq"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; }; - systemPipeR = derive2 { name="systemPipeR"; version="1.15.1"; sha256="1ljvvsbwnn03czl8rckbx4rlnggh29y133k95ldj3p8vjn61f23r"; depends=[annotate BatchJobs BiocGenerics Biostrings DESeq2 edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats limma pheatmap rjson Rsamtools ShortRead SummarizedExperiment VariantAnnotation]; }; - tRNAscanImport = derive2 { name="tRNAscanImport"; version="1.1.1"; sha256="0b9qr0wkbdy31j1jnxi6k883avr60shx8v111ra3pjvrfnczl933"; depends=[assertive BiocGenerics Biostrings GenomeInfoDb GenomicRanges reshape2 rtracklayer S4Vectors stringr]; }; - tRanslatome = derive2 { name="tRanslatome"; version="1.19.0"; sha256="08wlv7a39m1zrk8pssmck2zmyghn19ksr9fpf03z8ypwsqghaac5"; depends=[anota Biobase DESeq edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd samr sigPathway topGO]; }; - tenXplore = derive2 { name="tenXplore"; version="1.3.0"; sha256="1x0b4gjs1igir8k8zlwc66w63gsf2ffk3vk7yas1cl3ivvvvw400"; depends=[AnnotationDbi matrixStats ontoProc org_Mm_eg_db restfulSE shiny SummarizedExperiment]; }; + systemPipeR = derive2 { name="systemPipeR"; version="1.15.4"; sha256="174nh3p7rhfdhpl0rpyg14z3nr9gkv5j57csazdsqn6qd6fgblxy"; depends=[annotate BatchJobs BiocGenerics Biostrings DESeq2 edgeR GenomicFeatures GenomicRanges ggplot2 GO_db GOstats limma pheatmap rjson Rsamtools ShortRead SummarizedExperiment VariantAnnotation]; }; + tRNA = derive2 { name="tRNA"; version="0.99.11"; sha256="1ahqh4jrlgjdb25v47ilwx84dibgg0birqxz4jxmbkya0sah36i9"; depends=[assertive BiocGenerics Biostrings GenomicRanges ggplot2 IRanges S4Vectors scales stringr XVector]; }; + tRNAdbImport = derive2 { name="tRNAdbImport"; version="0.99.7"; sha256="0rys26q9vrblpkjq1hhsv924k9k3vf40dnqsbmwc7xbwxi3cb434"; depends=[assertive Biostrings GenomicRanges httr IRanges S4Vectors stringr tRNA xml2]; }; + tRNAscanImport = derive2 { name="tRNAscanImport"; version="1.1.9"; sha256="0r971lja5fb352yzvhnvbynci78rpni3rli4kx5pyshh7bymiml2"; depends=[assertive BiocGenerics Biostrings GenomeInfoDb GenomicRanges rtracklayer S4Vectors stringr tRNA]; }; + tRanslatome = derive2 { name="tRanslatome"; version="1.19.5"; sha256="1li5qwwmsq5pgawkb2ffd6yqh8qr88dan624fm938rj0iqdwaxz8"; depends=[anota Biobase DESeq edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd sigPathway topGO]; }; + tenXplore = derive2 { name="tenXplore"; version="1.3.1"; sha256="1jam1x14hr8rcgxq21yrpvfxcap3rcpcyz4pxh0d5z9n8ry7m2mr"; depends=[AnnotationDbi matrixStats ontoProc org_Mm_eg_db restfulSE shiny SummarizedExperiment]; }; ternarynet = derive2 { name="ternarynet"; version="1.25.1"; sha256="01yzfiyrbkdgzzkdnn2ifa879j8pal38k8zm83d4ad9y06v8ndbm"; depends=[igraph]; }; - tigre = derive2 { name="tigre"; version="1.35.0"; sha256="0bby62hc2858pppk071fn2qrnqyjwc7fnpvg17y5ff2042mg0g02"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; }; + tigre = derive2 { name="tigre"; version="1.35.3"; sha256="0ya16fnif6ww3xviadhrnkh7hdgpi7bb2rbj27lxahd7kpigja2v"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; }; tilingArray = derive2 { name="tilingArray"; version="1.59.0"; sha256="1kbw2hj4x3wizqia245kfb1x7rkd6prij7ywif8w3wcv9c8p919m"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; }; timecourse = derive2 { name="timecourse"; version="1.53.0"; sha256="1424s2ai9mkmxxswy6i928gzkk6kk5yz59nxkz91icg39xlf0rl5"; depends=[Biobase limma marray MASS]; }; - timescape = derive2 { name="timescape"; version="1.5.0"; sha256="0p0i3ypd4gg44l8s7yvphjwzadnnf5l6grg28wbm7miim54vvc2y"; depends=[dplyr gtools htmlwidgets jsonlite stringr]; }; + timescape = derive2 { name="timescape"; version="1.5.1"; sha256="0525j832iffyjcb1ii82jy0ix8mdfyf7w9frmc5zrwkflq0x2ds2"; depends=[dplyr gtools htmlwidgets jsonlite stringr]; }; tkWidgets = derive2 { name="tkWidgets"; version="1.59.0"; sha256="0nxvgfl8kmasb1i6s3sq46qz0f7sjbqlwm5hpww1856bqd8dyyld"; depends=[DynDoc widgetTools]; }; - tofsims = derive2 { name="tofsims"; version="1.9.0"; sha256="0hadp7726y0vfaz953hwpl27j8bhrdwrm66c81ic4jrpcicixvvr"; depends=[ALS ChemometricsWithR KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; }; - topGO = derive2 { name="topGO"; version="2.33.0"; sha256="1avq073grahvf92sg4jr6fg3ld5z18l1pnfsgp337m308zvss0mv"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; }; - trackViewer = derive2 { name="trackViewer"; version="1.17.2"; sha256="0hnhcns4kblnlvdsvvs3z1cmgmjvligyw90ykgskq47navwghjmm"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph grImport Gviz htmlwidgets InteractionSet IRanges plotrix Rgraphviz Rsamtools rtracklayer S4Vectors scales]; }; + tofsims = derive2 { name="tofsims"; version="1.9.1"; sha256="12agad74lcnmg6v5g0rjzvk0qa7abav5giaz45rha61f7lz2lv12"; depends=[ALS ChemometricsWithR KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; }; + topGO = derive2 { name="topGO"; version="2.33.1"; sha256="0g6kpxn0x4v55x2p28ikc556hcy3xy1d4wgag01k19ch9bmfaqhs"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; }; + topdownr = derive2 { name="topdownr"; version="1.3.6"; sha256="0wsicb1m9r3a2gzx0masrfbmdd2ind415rp9iba22blj5ykqx4x0"; depends=[Biobase BiocGenerics Biostrings ggplot2 Matrix MSnbase mzR ProtGenerics S4Vectors]; }; + trackViewer = derive2 { name="trackViewer"; version="1.17.8"; sha256="196c6inqnvxb0hdlnmi8dyp9sx9jyx6f3ks4gvlv3687yfb0b3fv"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph grImport Gviz htmlwidgets InteractionSet IRanges plotrix Rgraphviz Rsamtools rtracklayer S4Vectors scales]; }; tracktables = derive2 { name="tracktables"; version="1.15.0"; sha256="05glrr3f9clix43nvbsknicm9lyckswc5vj654444zhx08dmgnj5"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; }; - transcriptR = derive2 { name="transcriptR"; version="1.9.0"; sha256="0i5lclprp0ajm56czknqci6wiml9y30gy4y2gzm9150da2d6m3jc"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; }; - transcriptogramer = derive2 { name="transcriptogramer"; version="1.3.5"; sha256="0yfkblrbjgm1nf0c7bvb3xks5mmyf4d6g5m0anzhscq2l6a3r01a"; depends=[biomaRt data_table doSNOW foreach ggplot2 igraph limma progress RedeR snow tidyr topGO]; }; + transcriptR = derive2 { name="transcriptR"; version="1.9.1"; sha256="09ikxr69d54kskrpx18z8gsmbv3fa120x9qncmkmxczddkmswh6j"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; }; + transcriptogramer = derive2 { name="transcriptogramer"; version="1.3.6"; sha256="0yzb4yzd5qbcq8gnmni0bprjz2bni2ak08v75ln51k4hcnjdqsxa"; depends=[biomaRt data_table doSNOW foreach ggplot2 igraph limma progress RedeR snow tidyr topGO]; }; + transite = derive2 { name="transite"; version="0.99.4"; sha256="0iikbbpa9ih6jwz3dmcyqr7698axsr4zim9zfmvw5s516q939h2w"; depends=[BiocGenerics Biostrings dplyr GenomicRanges ggplot2 ggseqlogo gridExtra Rcpp scales TFMPvalue]; }; traseR = derive2 { name="traseR"; version="1.11.0"; sha256="18s4sy6v9wzcyd0i33zh1kf4nbxmsmzpvqsz6nz7d26xprmir450"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; }; - treeio = derive2 { name="treeio"; version="1.5.1"; sha256="1qn2zxv3adkwddar9d76xghamjl9y7589l2b2b17kd1pldx0q9m3"; depends=[ape dplyr jsonlite magrittr rlang rvcheck tibble tidytree]; }; - trena = derive2 { name="trena"; version="1.3.0"; sha256="1jchm38bwa4bf4a6mjwy4h96qjm65m05qq5yvwdd9257pm1lfs6p"; depends=[AnnotationDbi BiocParallel biomaRt Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 DBI flare GenomicRanges glmnet lassopv MotifDb org_Hs_eg_db randomForest RPostgreSQL RSQLite SNPlocs_Hsapiens_dbSNP150_GRCh38 vbsr]; }; + treeio = derive2 { name="treeio"; version="1.5.5"; sha256="1nvk2hr75zram3kiw5j65hlzf4gng2j0kbpscn3iwnhv8ja1a08h"; depends=[ape dplyr jsonlite magrittr rlang rvcheck tibble tidytree]; }; + trena = derive2 { name="trena"; version="1.3.1"; sha256="0yzspka8j9iyr4lb8vqsyzap3ps74bjnan3crq2b8qjfpmr0qrcy"; depends=[AnnotationDbi BiocParallel biomaRt Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 DBI flare GenomicRanges glmnet lassopv MotifDb org_Hs_eg_db randomForest RPostgreSQL RSQLite SNPlocs_Hsapiens_dbSNP150_GRCh38 vbsr]; }; triform = derive2 { name="triform"; version="1.23.0"; sha256="0rmxaa6hfslpqg5zngcy8s659v9n5mry6kjm1svniz347z7smdrj"; depends=[BiocGenerics IRanges yaml]; }; trigger = derive2 { name="trigger"; version="1.27.0"; sha256="0yi3r23yw1vsz5y5wxzql0gmvwks0i6kn7f4r53swzmb12fkgs7h"; depends=[corpcor qtl qvalue sva]; }; trio = derive2 { name="trio"; version="3.19.0"; sha256="1zix49bxx0qiz535cl8pmzjdbh4n4g5qa6bzd87p6ylrzzyxcq0j"; depends=[]; }; @@ -1518,31 +1616,32 @@ in with self; { tspair = derive2 { name="tspair"; version="1.39.0"; sha256="0anbb202pazdryadm7ww68nlrmyzand8kiwjfxnf59n6ansls8nd"; depends=[Biobase]; }; tweeDEseq = derive2 { name="tweeDEseq"; version="1.27.0"; sha256="0aycx0ixg6bj05wz9am84jxbwa9qbbh3hmjp0w4pppzbmv6xrydw"; depends=[cqn edgeR limma MASS]; }; twilight = derive2 { name="twilight"; version="1.57.0"; sha256="0mhx126yqlq76smabagwjxdff6n3vn9vzsr38nn0v8cs4vzq7v20"; depends=[Biobase]; }; - twoddpcr = derive2 { name="twoddpcr"; version="1.5.1"; sha256="0kw54x0wsf6mdbdzhvlyh8p8s6vw7yr8a2iyac7j50sqz3zwip5y"; depends=[class ggplot2 hexbin RColorBrewer S4Vectors scales shiny]; }; - tximport = derive2 { name="tximport"; version="1.9.7"; sha256="0xyb1zigqcpdfcwb3gyn7zwqmdxca4cpwl83qhxrfhb30jccxs6g"; depends=[]; }; + twoddpcr = derive2 { name="twoddpcr"; version="1.5.2"; sha256="0vs1hhlpsn08g5vf5yza0lb055x3lj0xwhgnd4lnq1qc8d1ksz1r"; depends=[class ggplot2 hexbin RColorBrewer S4Vectors scales shiny]; }; + tximeta = derive2 { name="tximeta"; version="0.99.18"; sha256="1x5vv6w34w3fqrp04i3zbq11zb8mblkvdqgmd790ll0f5y1qhq58"; depends=[AnnotationDbi BiocFileCache ensembldb GenomeInfoDb GenomicFeatures jsonlite rappdirs S4Vectors SummarizedExperiment tibble tximport]; }; + tximport = derive2 { name="tximport"; version="1.9.12"; sha256="1s5h5kxzb8nq9qc68rq5ik894yx7jl0315cn1b4k97i12rpajyjf"; depends=[]; }; uSORT = derive2 { name="uSORT"; version="1.7.0"; sha256="1f5dabc7ksz6fhx7x87dm8whlxrhzh5zzfysgs18fv6yn815x747"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; }; unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.17.0"; sha256="0rf9hrilb6d9jr2lbw20d3almds9lmhbdkmm130kx26kybp6vi1i"; depends=[BiocGenerics HTqPCR]; }; - variancePartition = derive2 { name="variancePartition"; version="1.11.6"; sha256="1759wz6xfvsbc0kf09dqq3n59nqqw0z81khh5gvzbgvq5q17ak3h"; depends=[Biobase colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 lmerTest MASS pbkrtest reshape2]; }; + variancePartition = derive2 { name="variancePartition"; version="1.11.14"; sha256="091j76x1jcc6g8vnzsjfnpf8q6d35rmvmv7sxcjx1jdyshl7gfjd"; depends=[Biobase colorRamps doParallel foreach ggplot2 gplots iterators limma lme4 lmerTest MASS pbkrtest reshape2 scales]; }; vbmp = derive2 { name="vbmp"; version="1.49.0"; sha256="0h2lwkqx765s6iyyr3mivj83zdg761bci0jz1g8q9wl8xk72ajif"; depends=[]; }; - vidger = derive2 { name="vidger"; version="1.1.3"; sha256="1hvxp7lzy95i37vyhk0xa0dpn64f9kflx6k95cndl0bbivq6lrbb"; depends=[Biobase DESeq2 edgeR GGally ggplot2 ggrepel knitr RColorBrewer rmarkdown scales SummarizedExperiment tidyr]; }; - viper = derive2 { name="viper"; version="1.15.0"; sha256="0cl6qn0jw5xgrg2wz9rkx8j5w3hx9vbjw1yh1ayvsdghb4vb8k5b"; depends=[Biobase e1071 KernSmooth mixtools]; }; + vidger = derive2 { name="vidger"; version="1.1.4"; sha256="1a48x1jjyccxbz792j7g538w82ascmm4aja10q0r60994h6hx6f2"; depends=[Biobase DESeq2 edgeR GGally ggplot2 ggrepel knitr RColorBrewer rmarkdown scales SummarizedExperiment tidyr]; }; + viper = derive2 { name="viper"; version="1.15.1"; sha256="1mi1qcznr8xcz5n5wr8mcbq5wxvb00rz4zahyv90aa5py62sxagw"; depends=[Biobase e1071 KernSmooth mixtools]; }; vsn = derive2 { name="vsn"; version="3.49.1"; sha256="1lklwnxvwv1x68nyywxkdgla5pz8d94a86whf5x9vcbvcmk92x2i"; depends=[affy Biobase ggplot2 lattice limma]; }; vtpnet = derive2 { name="vtpnet"; version="0.21.0"; sha256="0f89b3s1412sxwp64dlnc8rlawy2w86d1y5g1c7n2hd290m51dvp"; depends=[doParallel foreach GenomicRanges graph gwascat]; }; - vulcan = derive2 { name="vulcan"; version="1.3.0"; sha256="182aq3ly17chrlisdjsf3zzwxfv004cwbbpl2rfk40ws1376xf1i"; depends=[Biobase caTools ChIPpeakAnno csaw DESeq DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; }; - wateRmelon = derive2 { name="wateRmelon"; version="1.25.0"; sha256="0arrpkdrxy1rz3ryiswq767rz5rqmvs2rxj85lagk6rj17ia64c2"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; }; + vulcan = derive2 { name="vulcan"; version="1.3.1"; sha256="0lviq4mgnpfqb0rrh64r73xlqb50q2k4qagbn8gn9ifj35wvv2lr"; depends=[Biobase caTools ChIPpeakAnno csaw DESeq DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; }; + wateRmelon = derive2 { name="wateRmelon"; version="1.25.2"; sha256="0cqy6kp2d4bms235sdzr9vy8j0956wyqr80q2kk4jqywxcb6l1yn"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; }; wavClusteR = derive2 { name="wavClusteR"; version="2.15.0"; sha256="0pngqm1b5z8zm5sdnqprq5mibrfm5rwzi0sa0mgwg9gsrn8wcg09"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr wmtsa]; }; waveTiling = derive2 { name="waveTiling"; version="1.23.0"; sha256="018vhrv092qfyd5vmdbq216h3rsr6xk9nnknb4x0vnk1l7yckrk8"; depends=[affy Biobase Biostrings GenomeGraphs GenomicRanges IRanges oligo oligoClasses preprocessCore waveslim]; }; weaver = derive2 { name="weaver"; version="1.47.0"; sha256="096sgg9xrnlf819bh6gz6a9phbhn7a54phd4nl8gz7xfjxscfrhi"; depends=[codetools digest]; }; - webbioc = derive2 { name="webbioc"; version="1.53.0"; sha256="0vm80p0sbp9lj9d29g3agmkrav4whbndgj4rhw9gz9cd7i1lv0jj"; depends=[affy annaffy Biobase BiocInstaller gcrma multtest qvalue vsn]; }; + webbioc = derive2 { name="webbioc"; version="1.53.1"; sha256="0wjkfa6s1a0vhbfpplsvy0qzkrs94x2zd3s1kpcg5p6j4v9x9ph4"; depends=[affy annaffy Biobase BiocManager gcrma multtest qvalue vsn]; }; widgetTools = derive2 { name="widgetTools"; version="1.59.0"; sha256="1ypz4rpi6yw6dg1w1dgnjx389xldmjzh484bs9dqzz27ly8b860v"; depends=[]; }; - wiggleplotr = derive2 { name="wiggleplotr"; version="1.5.0"; sha256="1n338nhd8rpdv218qwnlrj8vqvnq131x51nfylzv9a8fn4d3lv7g"; depends=[assertthat cowplot dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges purrr rtracklayer S4Vectors]; }; - xcms = derive2 { name="xcms"; version="3.3.2"; sha256="1pnbp8a9gx1ys69yr7vv7mdzl5mcj9azxy0agq16xhxix7mwp13w"; depends=[Biobase BiocGenerics BiocParallel lattice MassSpecWavelet MSnbase multtest mzR plyr ProtGenerics RANN RColorBrewer robustbase S4Vectors]; }; + wiggleplotr = derive2 { name="wiggleplotr"; version="1.5.1"; sha256="01d237s89qkj5i2d377g20h2ibqz1f4m087xchq1lnfmkb3mq0fm"; depends=[assertthat cowplot dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges purrr rtracklayer S4Vectors]; }; + xcms = derive2 { name="xcms"; version="3.3.6"; sha256="17mj4jlw0r48l311nhh44qpmgjcw4bq535xj7ljvg5mkxx74zlxj"; depends=[Biobase BiocGenerics BiocParallel lattice MassSpecWavelet MSnbase multtest mzR plyr ProtGenerics RANN RColorBrewer robustbase S4Vectors]; }; xmapbridge = derive2 { name="xmapbridge"; version="1.39.0"; sha256="075yj9vqy4gf5ijirpfnm08rxqzg3bflirlr5j6qmr146jsj5cky"; depends=[]; }; xps = derive2 { name="xps"; version="1.41.2"; sha256="01da8wc01fry7z8ma880h5g6vvqi3rdwqg5wmx9x56yfg0c293im"; depends=[]; }; yamss = derive2 { name="yamss"; version="1.7.0"; sha256="1h8wz9cm042n9scgpm0m3c7v3wik8nr7lrm4nb47bikzcij7ymd3"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; }; yaqcaffy = derive2 { name="yaqcaffy"; version="1.41.0"; sha256="044gyqh9pk2ml6f99mfjfw7zp2ygnis74jh4x8z7i99q6jip8pbn"; depends=[simpleaffy]; }; - yarn = derive2 { name="yarn"; version="1.7.0"; sha256="19x4r9mmii1r4ypj2p6f4vk396f0xqzbbpys3wqkwklf9gsqia32"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; }; + yarn = derive2 { name="yarn"; version="1.7.1"; sha256="02km8cd5l2l7whzb585c741qkzv6zlmxrl0fjfp13nsww69vg914"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; }; zFPKM = derive2 { name="zFPKM"; version="1.3.0"; sha256="12yj97g1y37aq4qfyqchgvp93kkb0bzxmk196s1vygh4dk0b36lp"; depends=[checkmate dplyr ggplot2 SummarizedExperiment tidyr]; }; - zinbwave = derive2 { name="zinbwave"; version="1.3.2"; sha256="1arl59nlzksmc95hqp5pj86yj8xq122mdw3ng4pxwdbm5fs63dw7"; depends=[BiocParallel copula edgeR genefilter glmnet Matrix SingleCellExperiment softImpute SummarizedExperiment]; }; + zinbwave = derive2 { name="zinbwave"; version="1.3.4"; sha256="0px2v20plqnshb41wy7fk9vh00l45m8mm7paqd4m197wjpxbyf3s"; depends=[BiocParallel copula edgeR genefilter glmnet Matrix SingleCellExperiment softImpute SummarizedExperiment]; }; zlibbioc = derive2 { name="zlibbioc"; version="1.27.0"; sha256="17jr4jgl30qlnmjfzzc1qd1rah5c9bwbp08dsnkhy7fxpwimqm2i"; depends=[]; }; } diff --git a/pkgs/development/r-modules/cran-packages.nix b/pkgs/development/r-modules/cran-packages.nix index db78421cf5ef..e942aa838770 100644 --- a/pkgs/development/r-modules/cran-packages.nix +++ b/pkgs/development/r-modules/cran-packages.nix @@ -4,7 +4,7 @@ # Rscript generate-r-packages.R cran >new && mv new cran-packages.nix { self, derive }: -let derive2 = derive { snapshot = "2018-07-06"; }; +let derive2 = derive { snapshot = "2018-10-29"; }; in with self; { A3 = derive2 { name="A3"; version="1.0.0"; sha256="017hq9pjsv1h9i7cqk5cfx27as54shlhdsdvr6jkhb8jfkpdb6cw"; depends=[pbapply xtable]; }; ABC_RAP = derive2 { name="ABC.RAP"; version="0.9.0"; sha256="1kdspln17v0krvahcd55vib4dv5azp60b3r1zf489x10qqbp1mxk"; depends=[]; }; @@ -12,7 +12,7 @@ in with self; { ABCoptim = derive2 { name="ABCoptim"; version="0.15.0"; sha256="1ih0xk88qhsmpvnxf56041wx5sk8as2f4f2gdnpnwdym9mbr9n4b"; depends=[Rcpp]; }; ABCp2 = derive2 { name="ABCp2"; version="1.2"; sha256="1s2skkxpzss7c29i8600psgrp0hl46jcrxqrmy2b4db8hc0kcnbx"; depends=[MASS]; }; ABHgenotypeR = derive2 { name="ABHgenotypeR"; version="1.0.1"; sha256="08cpmnaaxsm5c5bjifnfxdlvg5inrf13biqpcl2yq5zpqjmiki0l"; depends=[ggplot2 reshape2]; }; - ABPS = derive2 { name="ABPS"; version="0.2"; sha256="1k3f5i34f4w2khkszb4qhwwcpiy7gsfh82vjr6rypwg6rx5rjclq"; depends=[kernlab]; }; + ABPS = derive2 { name="ABPS"; version="0.3"; sha256="0n3f66nmfi5v94il1mxy026mi84w01ph2aljk60vn3mrz8kwf2ll"; depends=[kernlab]; }; ACA = derive2 { name="ACA"; version="1.1"; sha256="1i3hm27nvnkvc39xlh0d1blq8q0q02czmvgi3cazmjx3jvxay0vq"; depends=[]; }; ACCLMA = derive2 { name="ACCLMA"; version="1.0"; sha256="1na27sp18fq12gp6vxgqw1ffsz2yi1d8xvrxbrzx5g1kqxrayy0v"; depends=[]; }; ACD = derive2 { name="ACD"; version="1.5.3"; sha256="1a67bi3hklq8nlc50r0qnyr4k7m9kpvijy8sqqpm54by5hsysfd6"; depends=[]; }; @@ -26,9 +26,9 @@ in with self; { ADCT = derive2 { name="ADCT"; version="0.1.0"; sha256="1glf83ydx4v3ld8c4gb9h3jk6srd054bis5l8k57p1ba4fnqnnpp"; depends=[mvtnorm]; }; ADDT = derive2 { name="ADDT"; version="2.0"; sha256="044bb1jw2m8vwk5q8l7rlz4kqphjvy8i9d59rjg0k5q5l9vczfrp"; depends=[coneproj Matrix nlme]; }; ADGofTest = derive2 { name="ADGofTest"; version="0.3"; sha256="0ik817qzqp6kfbckjp1z7srlma0w6z2zcwykh0jdiv7nahwk3ncw"; depends=[]; }; - ADMM = derive2 { name="ADMM"; version="0.3.0"; sha256="0j3sh497pf495qf1ivvp8h4hplq6km6m923kiv5j02sianl1j9zh"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo Rdpack]; }; + ADMM = derive2 { name="ADMM"; version="0.3.1"; sha256="121hqglivik65gv657bdv7a8kzgvrwgwckz2h746fcibv2s7dfsi"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo Rdpack]; }; ADMMnet = derive2 { name="ADMMnet"; version="0.1"; sha256="15f1zhgv7xai954qz2ahj4kpxyvr2svxpmybz7j43bhjpkq72dmq"; depends=[Matrix Rcpp RcppEigen]; }; - ADMMsigma = derive2 { name="ADMMsigma"; version="2.0"; sha256="1lyixqbfmrk850y4v89chwws0arjc6j420r55p733p0zvj0mryha"; depends=[doParallel dplyr foreach ggplot2 Rcpp RcppArmadillo RcppProgress]; }; + ADMMsigma = derive2 { name="ADMMsigma"; version="2.1"; sha256="1943dza086s22pr0yz41wzn9cdg11x7fl9zr3w012865yj219m7l"; depends=[doParallel dplyr foreach ggplot2 Rcpp RcppArmadillo RcppProgress]; }; ADPF = derive2 { name="ADPF"; version="0.0.1"; sha256="1n7302xx77ngvp9i2h582i1mqslzllcdr0bn3pl2zk9jd8k97p7n"; depends=[]; }; ADPclust = derive2 { name="ADPclust"; version="0.7"; sha256="0s47cpsjykn7imsssa9w9b6g9d1sz2yah78yqzxmh0i3lqd757c1"; depends=[cluster dplyr fields knitr]; }; AEDForecasting = derive2 { name="AEDForecasting"; version="0.20.0"; sha256="16q2sn5zzvysyy3r32jnr21pbdkkn0k0sbarni6fdkx7pj27yijn"; depends=[changepoint forecast signal]; }; @@ -61,7 +61,7 @@ in with self; { AMModels = derive2 { name="AMModels"; version="0.1.3"; sha256="1lhd15sh550z664qqxw6jpknnh628hm585d70ipx8s4mswi6g4hj"; depends=[unmarked]; }; AMOEBA = derive2 { name="AMOEBA"; version="1.1"; sha256="1npzh3rpfnxd4r1pj1hm214sfgbw4wmq4ws093lnl7pvsl0q37xn"; depends=[rlecuyer snowfall spdep]; }; AMORE = derive2 { name="AMORE"; version="0.2-15"; sha256="00zfqcsah2353mrhqkv8bbh24l8gaxk4y78icr9kxy4pqb2988yz"; depends=[]; }; - AMR = derive2 { name="AMR"; version="0.2.0"; sha256="0n3qzkqxq06vxx0nk4983k7khcy14hc4cxd3cii8lscf3y6bmvjc"; depends=[backports data_table dplyr knitr reshape2 rvest tibble xml2]; }; + AMR = derive2 { name="AMR"; version="0.4.0"; sha256="056r5z553r6amq7kdbc4rl4mqlcrzsm7aprlf733as8rrabjfh9c"; depends=[backports curl data_table dplyr hms knitr rlang rvest xml2]; }; ANN2 = derive2 { name="ANN2"; version="1.5"; sha256="17b0dv1dl4kni7yvrrwk65cadk6f7qk7505r27j9v530pffyv1k3"; depends=[Rcpp RcppArmadillo robustbase]; }; ANOM = derive2 { name="ANOM"; version="0.5"; sha256="14nfy9xplbabfprwxz5fvx26nmqhp657vr6d90dc8vk8ds63ckiz"; depends=[ggplot2 MCPAN multcomp nparcomp SimComp]; }; ANOVA_TFNs = derive2 { name="ANOVA.TFNs"; version="1.0"; sha256="0dwspvxj2gzyvxsd9xyhv47n1hjlqa7z9qza4h3hn1xda12vkjly"; depends=[FuzzyNumbers]; }; @@ -72,24 +72,26 @@ in with self; { APSIM = derive2 { name="APSIM"; version="0.9.2"; sha256="0yyjz1kyvqpw9dh71ls2lf44gbb6r7bp9a22mr3z68k89azps5rc"; depends=[data_table lubridate plyr RSQLite sirad stringr]; }; APSIMBatch = derive2 { name="APSIMBatch"; version="0.1.0.2374"; sha256="0j44ijq1v1k60lka9nmw8m1jfjw7pidny9bvswqy5v82gzmwl29d"; depends=[]; }; APfun = derive2 { name="APfun"; version="0.1.3"; sha256="02p40n4l66r63wq8x7ygchfhxmnpaa7vgy4bjhkqx5gfi2v4psxd"; depends=[maptools raster rgdal sp yesno]; }; - APtools = derive2 { name="APtools"; version="3.0"; sha256="0v5xgznc8hvw3gid8x5chksc62zpwbx34qsh64sv7d1kqmh5w26j"; depends=[survival]; }; + APtools = derive2 { name="APtools"; version="6.8.8"; sha256="171aydyd7s8qll7djl4ysy596wxdf5wfwpqwfi14jjglc9r9qrrr"; depends=[cmprsk survival]; }; AR = derive2 { name="AR"; version="1.1"; sha256="1wn4g2997c4vc3mzq2pv8ld0ryp0i78v4zlqqryvhshxgnz4f2pr"; depends=[DISTRIB]; }; AR1seg = derive2 { name="AR1seg"; version="1.0"; sha256="0v9adx5wj9r4jwl3bqqmj0byiqfp585jz013qfqrq601wj8v4zi3"; depends=[Segmentor3IsBack]; }; ARCensReg = derive2 { name="ARCensReg"; version="2.1"; sha256="05zjk1wxqfigzg80lvx1940a059jfdr9zbzgzmz2n01glj1lvj63"; depends=[msm mvtnorm numDeriv tmvtnorm]; }; ARHT = derive2 { name="ARHT"; version="0.1.0"; sha256="1fz81a202r8vk655dg6a03zfq3gfkimqjvmc95k3j02xz0iv58kn"; depends=[]; }; + ARIbrain = derive2 { name="ARIbrain"; version="0.2"; sha256="18c7yxkrnqh18gcfzvdc5wqig6ywdmjcy8rlz0fdj3b8fb84dfpr"; depends=[hommel plyr RNifti]; }; AROC = derive2 { name="AROC"; version="1.0"; sha256="1mmcd8nqwzaqghzbcrv0g767j57svzvlzgk71ir61vvjhsk91dkg"; depends=[Hmisc MASS Matrix moments np]; }; ARPobservation = derive2 { name="ARPobservation"; version="1.1"; sha256="1cdhn11jf1nf03jyvs17ygmjq9pb5rvmyyrq9fp7ifmvcgbkwsms"; depends=[]; }; ART = derive2 { name="ART"; version="1.0"; sha256="186w1ivj5v3h906crl953qxgai5wiznaih83dgvwgnmabs9p1wvk"; depends=[car]; }; ARTIVA = derive2 { name="ARTIVA"; version="1.2.3"; sha256="1jdvsslc8parz7wibcv51fx62brl2mc6i482hz43j1npsms2z1hl"; depends=[gplots igraph MASS]; }; ARTP = derive2 { name="ARTP"; version="2.0.5"; sha256="0lwvhf5lamw28sd41vrhyin8ab92rl93j1ahk0aacwvnikgmfkpj"; depends=[]; }; - ARTP2 = derive2 { name="ARTP2"; version="0.9.32"; sha256="12mrxssjcj08svdsrxv2nm53mzsgy1k0whd5zzy6fz327bjyqsrz"; depends=[data_table Formula]; }; - ARTool = derive2 { name="ARTool"; version="0.10.4"; sha256="1malrjv4myk9nj3dndgpzscfhky4y6lj8xbfg8h2b29g7s2k846q"; depends=[car dplyr lme4 magrittr plyr]; }; + ARTP2 = derive2 { name="ARTP2"; version="0.9.44"; sha256="0qwjfpinvlsxswq7m2biyd78cvm14xbb09g873vhmkjds3qxdk4c"; depends=[data_table Formula]; }; + ARTool = derive2 { name="ARTool"; version="0.10.5"; sha256="1l219j5zp0sck0l326fi8nfsw29d83h18ahm4gs4bknfbbv895ic"; depends=[car dplyr lme4 magrittr plyr]; }; ASGS_foyer = derive2 { name="ASGS.foyer"; version="0.2.1"; sha256="0f0bl1fxda012d8pgqpaqb80m0nn490xih3ddscfqgb87zgrp4sx"; depends=[sp]; }; ASIP = derive2 { name="ASIP"; version="0.4.9"; sha256="06f1nvy920vyx3bmdi77mwvfsn32xsfxaslhagnf1zh652vfkbwi"; depends=[raster rgdal stringr]; }; - ASMap = derive2 { name="ASMap"; version="1.0-2"; sha256="0fhivq5i2py79jkwfms0my77p9x8lrkn5vn1lwbsawfkyar4dvkq"; depends=[fields gtools lattice qtl RColorBrewer]; }; + ASMap = derive2 { name="ASMap"; version="1.0-4"; sha256="0xnrl8jhbvbc789w5gc9dz7j7gzc7wsc94a3d2wdplrmxn186nrb"; depends=[fields gtools lattice qtl RColorBrewer]; }; ASPBay = derive2 { name="ASPBay"; version="1.2"; sha256="0b1qpyvmj7z10ixrmdxp42bj9s72c1l9rihzmv9p58f12a5aznjz"; depends=[hexbin Rcpp RcppArmadillo]; }; ASSA = derive2 { name="ASSA"; version="1.0"; sha256="0xdmkl3qy1i6rb5wpiw6rqhz5c88zg9nav7qll235jvxwh3388xk"; depends=[]; }; ASSISTant = derive2 { name="ASSISTant"; version="1.2-3"; sha256="072lmvmdi5yfyfda42vs556ciwj2rnka02isnknk6czir3947nck"; depends=[mvtnorm R6]; }; + AST = derive2 { name="AST"; version="0.1.0"; sha256="0z5dw5qw0i61v4796ms7pp66f9y4ylxrcls31ixzcmkklh3rcnp3"; depends=[]; }; ATE = derive2 { name="ATE"; version="0.2.0"; sha256="1i46ivb7q61kq11z9v1rlnwad914nsdjcz9bagqx17vjk160mc0a"; depends=[]; }; ATR = derive2 { name="ATR"; version="0.1-0"; sha256="0ljrpix3ksi0v38sfb25s2dlfj1yjbvwcz147dk2v2c24cn3r816"; depends=[partykit]; }; ATmet = derive2 { name="ATmet"; version="1.2"; sha256="047ibxxf5si45zw22zy8a1kpj36q0pd3bsmxwvn0dhf4h65ah0zz"; depends=[DiceDesign lhs metRology msm sensitivity]; }; @@ -100,13 +102,14 @@ in with self; { AWR_Athena = derive2 { name="AWR.Athena"; version="1.1.0-1"; sha256="0p701jj1683npsxa3l5g0cd35yvp9823kadpw9fjvn9ixdfy1nk1"; depends=[rJava RJDBC]; }; AWR_KMS = derive2 { name="AWR.KMS"; version="0.1"; sha256="00aqhyqlncsv0vfcyhaazxaclwm63v5kscssash7529avdwd4gqg"; depends=[AWR jsonlite rJava]; }; AWR_Kinesis = derive2 { name="AWR.Kinesis"; version="1.7.3"; sha256="1gfjzbb8xxfd2x5zabysqi0x10sb1c9826wqw8y555nsxgksqxz8"; depends=[AWR futile_logger jsonlite rJava]; }; - AbSim = derive2 { name="AbSim"; version="0.2.4"; sha256="0n90zbm5nsb9ric92p0mp3a4nzivdh8m8dls18051v2dbn5h4z1v"; depends=[ape poweRlaw]; }; + AbSim = derive2 { name="AbSim"; version="0.2.6"; sha256="16ddjk8b6xw80ch4jis1y751i9561wdxh0gifbf15qiz3vjckq8m"; depends=[ape poweRlaw]; }; AbsFilterGSEA = derive2 { name="AbsFilterGSEA"; version="1.5.1"; sha256="15srxkxsvn38kd5frdrwfdf0ad8gskrd0h01wmdf9hglq8fjrp7w"; depends=[Biobase DESeq limma Rcpp RcppArmadillo]; }; Ac3net = derive2 { name="Ac3net"; version="1.2.2"; sha256="1ns4n0xxz6p34c11bj0k7nzgmyqr9mis2b0g5nfz37dbikndyqyz"; depends=[data_table]; }; AcceptanceSampling = derive2 { name="AcceptanceSampling"; version="1.0-5"; sha256="18krmmyn8pn11aqd81kbvka68lnd36mnpdh7p3pz9r4m4vjj007x"; depends=[]; }; - AcousticNDLCodeR = derive2 { name="AcousticNDLCodeR"; version="1.0.1"; sha256="16rmwz51fy84w83vwnq2nv9mcrp4gi9ciirj5555gl1224b9i2am"; depends=[seewave tuneR zoo]; }; + AcousticNDLCodeR = derive2 { name="AcousticNDLCodeR"; version="1.0.2"; sha256="1fgzgwanpv2pzy74xdk3hamc44p8qch467wh163dxby8jr9ik0sb"; depends=[seewave tuneR zoo]; }; AcrossTic = derive2 { name="AcrossTic"; version="1.0-3"; sha256="03180h79jhjd66ibrnsfp3yyp2jlfysp7cymw46phzj2palghsc0"; depends=[lpSolve treeClust]; }; Actigraphy = derive2 { name="Actigraphy"; version="1.3.2"; sha256="0y0ccmxhdfhdmi4k6pbfvnqknkqbgvfsf2qf7z7rc4xpfgym6574"; depends=[fda SDMTools]; }; + ActisoftR = derive2 { name="ActisoftR"; version="0.0.2"; sha256="07nq31r71kg94zlyzshcnsfl99cc3x03fw5q8qgsfkpc92ridikr"; depends=[data_table dplyr ggplot2 lubridate magrittr RColorBrewer scales tibble tidyr]; }; ActiveDriver = derive2 { name="ActiveDriver"; version="1.0.0"; sha256="10c7ga48fwvpd5mc4dqiyw4kc2l0iz5qn4hg7xk15r1qmm5rsipa"; depends=[MASS]; }; AcuityView = derive2 { name="AcuityView"; version="0.1"; sha256="0f0iclmnwdc8ixiiai4svk4x1g3pjy7dhm3cm58fv6ckx12d3d2l"; depends=[fftwtools imager plotrix]; }; AdMit = derive2 { name="AdMit"; version="2.1.3"; sha256="150zjxl56axhpgm25hzyhwwc5g77pkgi291d2v56zbjjqycfz2v8"; depends=[mvtnorm]; }; @@ -115,19 +118,22 @@ in with self; { AdapSamp = derive2 { name="AdapSamp"; version="1.1.1"; sha256="1jayjrsiib2ij4rxxj59g71r3xhzl5yqh0lhi8k6cfy03i7dkvis"; depends=[pracma]; }; AdaptFit = derive2 { name="AdaptFit"; version="0.2-2"; sha256="124lj1sq5cbp35z4ybkc7ci3fi6pgf8pc5k9mpqmyb6dj870q836"; depends=[cluster MASS nlme SemiPar]; }; AdaptFitOS = derive2 { name="AdaptFitOS"; version="0.67"; sha256="0s8vv960pkbccpwlfsg1jsfjnfmq9iy8cj1fak5fn2s60zb7nm0a"; depends=[MASS mgcv nlme SemiPar]; }; - AdaptGauss = derive2 { name="AdaptGauss"; version="1.3.3"; sha256="0f6wk9ds8ayzi0fj1dz1m3755d1sjv4v5vc1hjhfxaim127kmbqh"; depends=[caTools ggplot2 shiny]; }; + AdaptGauss = derive2 { name="AdaptGauss"; version="1.3.5"; sha256="064mpylzpz7ngqlk637b9ykia4zn7jpcdnxdfp5j84a0fvbm8gx8"; depends=[ggplot2 pracma shiny]; }; + AdaptiveSparsity = derive2 { name="AdaptiveSparsity"; version="1.6"; sha256="0imr5m8mll9j6n4icsv6z9rl5kbnwsp9wvzrg7n90nnmcxq2cz91"; depends=[MASS Matrix Rcpp RcppArmadillo]; }; AdequacyModel = derive2 { name="AdequacyModel"; version="2.0.0"; sha256="0amp6ic1wylk24sp9wpx3ci38njj7b9qjqfp89j39hkl6kc1q7sq"; depends=[]; }; AdhereR = derive2 { name="AdhereR"; version="0.2.0"; sha256="1w42wg52ca0vdrj61dmyikvjvsndwhpyvnkzyissf3zvb69v32im"; depends=[data_table lubridate manipulate shiny]; }; AdjBQR = derive2 { name="AdjBQR"; version="1.0"; sha256="14437pyz9v09ighwqvy1lcw0vfp2gaqzs9nzrb1gkfbb8ndzjw7k"; depends=[coda MHadaptive quantreg survival]; }; AdvBinomApps = derive2 { name="AdvBinomApps"; version="1.0"; sha256="1cnmn6c2dyl8qfl7g5sqwbjb52psqxzrj1mbm06zak2y1j7j8f49"; depends=[GenBinomApps rootSolve]; }; - AdvDif4 = derive2 { name="AdvDif4"; version="0.2.18"; sha256="0vc8hbqjad9rsssd3ff84bgqxz4q6ad1fbz5gcaq1s08979r3kkk"; depends=[]; }; + AdvDif4 = derive2 { name="AdvDif4"; version="0.3.18"; sha256="0a7yjz9qsyacwb620pcgax9dxmr1qy7a0vypsr5dw2baxm9y4k6z"; depends=[]; }; AggregateR = derive2 { name="AggregateR"; version="0.0.2"; sha256="15gxzs3baa6f1rqwv7s7k6zybx0za1mpzc7db1n47jy9rbh2yxb2"; depends=[dummy]; }; + AgreementInterval = derive2 { name="AgreementInterval"; version="0.1.1"; sha256="1bvinzylvsaipa8mq15f45b6h37znavlrdl0rbrx1pqw52r7z8kv"; depends=[psych]; }; AhoCorasickTrie = derive2 { name="AhoCorasickTrie"; version="0.1.0"; sha256="0k2lcyxfsavis9g1g5293f0mw7f6jakkr11wkkjvxdlnba9c80r8"; depends=[Rcpp]; }; Ake = derive2 { name="Ake"; version="1.0"; sha256="1dj598xfdyjqvysc39a0d5gizgk367c5lkddmwmsqa8zjmvpr15a"; depends=[]; }; AlgDesign = derive2 { name="AlgDesign"; version="1.1-7.3"; sha256="0bl7mx4dnmkgs2x1fj7cqnrp7jx18mqwxyga0rzlniq12h8mc3fz"; depends=[]; }; AlgebraicHaploPackage = derive2 { name="AlgebraicHaploPackage"; version="1.2"; sha256="1krm5cx609sv2p0g3xm5jaiqs9li06v717lw7ywjvx7myc9x4c07"; depends=[]; }; AllPossibleSpellings = derive2 { name="AllPossibleSpellings"; version="1.1"; sha256="0ksfm2pfjka3yjgcd257v7sns1niaylsfxvhhh2jwdi016cpdw10"; depends=[]; }; AlleleRetain = derive2 { name="AlleleRetain"; version="2.0.2"; sha256="0b6h5giskqbjbrk8nf29i75wrhxsjw1c87laiqzrpbp9n717bl20"; depends=[]; }; + AlphaSimR = derive2 { name="AlphaSimR"; version="0.8.2"; sha256="0illa9y0k1xlvwmnpmgabbjqa73pl6gvvb29n97vlpbv5zkpfk8l"; depends=[BH R6 Rcpp RcppArmadillo]; }; AlphaVantageClient = derive2 { name="AlphaVantageClient"; version="0.0.1"; sha256="095m850v945lw7i3qd812p28srdb5hdk9h52zf6bkr166zai1ni0"; depends=[httr xts]; }; Amelia = derive2 { name="Amelia"; version="1.7.5"; sha256="1mnvms3bgc5i0v7wdmfx7nikr8wxyzmqi36sj2fz4qv5b0mf4zpa"; depends=[foreign Rcpp RcppArmadillo]; }; AmericanCallOpt = derive2 { name="AmericanCallOpt"; version="0.95"; sha256="1nhy44j5bmmjsp6g79nrn741rzzxikhdnxk4wwbdj9igcc1bs573"; depends=[]; }; @@ -138,7 +144,7 @@ in with self; { AmpliconDuo = derive2 { name="AmpliconDuo"; version="1.1"; sha256="1vqpahavsksphxjyhd94dghg9ddskbfbs5vl5qcwl3jkjfvl7lwy"; depends=[ggplot2 xtable]; }; AmyloGram = derive2 { name="AmyloGram"; version="1.1"; sha256="1xdi3i3nw4fzj4d040r55f0gid72gy3vbz5nbdrvapl97zk3kp8c"; depends=[biogram ranger seqinr shiny]; }; AnDE = derive2 { name="AnDE"; version="1.0"; sha256="1yil8ab50wvlqmdla9kmfba8vfgy5r694r6igb58s6vnmld78yf2"; depends=[discretization foreign functional stringr]; }; - AnaCoDa = derive2 { name="AnaCoDa"; version="0.1.1"; sha256="1v8jlyzqp9k084lzmaihp5nh7mybbgnnxnbbfkydq24b9wskfd4b"; depends=[Rcpp]; }; + AnaCoDa = derive2 { name="AnaCoDa"; version="0.1.2"; sha256="0z7agi6992prfvc6y1gvy3j3dvy4x5xfgajgv5j76pns54sj3dl8"; depends=[Rcpp]; }; AnalyzeFMRI = derive2 { name="AnalyzeFMRI"; version="1.1-17"; sha256="1gqhjknqq325m0ryabcdw1r3j5b9xwxg09ndqdcyw4rknc2mdzn1"; depends=[fastICA R_matlab tkrplot]; }; AnalyzeTS = derive2 { name="AnalyzeTS"; version="2.2"; sha256="0ll4g8yzxhricz56vin8hhyplrmvjmkwfldya41vz6y6bwhywnmb"; depends=[MASS TSA tseries TTR urca]; }; AncestryMapper = derive2 { name="AncestryMapper"; version="2.0"; sha256="1fr2y1a5rn7rq8aly94f618kywix32jwysi70nfhaqx8hf4zzprb"; depends=[svd]; }; @@ -148,23 +154,24 @@ in with self; { AnnuityRIR = derive2 { name="AnnuityRIR"; version="1.0-0"; sha256="0yvfqzwhm5nhywfhzkxkfm07c0qi6z21j1cdaypz89qn567aj1d9"; depends=[actuar EnvStats fitdistrplus mc2d tseries]; }; AntAngioCOOL = derive2 { name="AntAngioCOOL"; version="1.2"; sha256="1krwms0y3xppc2y4m0az51wcbh4jq7mlr0jwinp66w8gh4k3qnp2"; depends=[caret rJava rpart RWeka]; }; AntWeb = derive2 { name="AntWeb"; version="0.7"; sha256="1ykfg3zzjdvjppr2l4f26lx00cn5vaqhhz1j1b5yh113ggyl40qw"; depends=[assertthat httr leafletR plyr rjson]; }; - AnthropMMD = derive2 { name="AnthropMMD"; version="2.5.0"; sha256="0pp9ihrkjwzp6zyglkp81ry4fzm1s26r687bhxswx5iz1brzmhdn"; depends=[scatterplot3d shiny smacof]; }; + AnthropMMD = derive2 { name="AnthropMMD"; version="2.5.1"; sha256="0ria1azmxsw54h5zdfvpyw95rcvqkl3v91d80s7pqzjz6zcz7adg"; depends=[scatterplot3d shiny smacof]; }; Anthropometry = derive2 { name="Anthropometry"; version="1.10"; sha256="1rny65070yrdxnny8frp5ryp811h59924z5pfwg0cmd2szxnxnz7"; depends=[archetypes biclust cluster depth FNN ICGE nnls rgl shapes]; }; Aoptbdtvc = derive2 { name="Aoptbdtvc"; version="0.0.2"; sha256="1bygvf8vgzz3wa4485x2xxpk784zmw1nwsjjjysm12brrldh8zzh"; depends=[lpSolve MASS]; }; + ApacheLogProcessor = derive2 { name="ApacheLogProcessor"; version="0.2.3"; sha256="0h4snigh1yhp34vw52h4b6qbh9c4cvwz2cx8fwvbnw6lslmg5cgv"; depends=[doParallel foreach stringr]; }; AppliedPredictiveModeling = derive2 { name="AppliedPredictiveModeling"; version="1.1-7"; sha256="1wi0sw5w1c51rmh9z98wdpk5rgzsylkkb6g019djiwxvj92l99hh"; depends=[CORElearn ellipse lattice MASS plyr reshape2]; }; AquaEnv = derive2 { name="AquaEnv"; version="1.0-4"; sha256="07yx7mbslqgqg7ky67n3xfhskaj7s3w5mvl7xkih48xbsdlmxi4l"; depends=[minpack_lm]; }; - ArArRedux = derive2 { name="ArArRedux"; version="0.2"; sha256="0ql9yx46sgqkc3jd7yaw3vwg8rnykbsvpcahrgc66753kcxih04q"; depends=[]; }; + ArArRedux = derive2 { name="ArArRedux"; version="1.0"; sha256="11h88gnj54cn5fbxf163s8kjqc1q452nzb218fjlwsxxwzaz5gbr"; depends=[]; }; ArCo = derive2 { name="ArCo"; version="0.3-1"; sha256="1afjdmcalx3m19jlvqs83fg5qlds59l5zzg3pzk13qk31r0hz7mk"; depends=[boot glmnet Matrix]; }; ArDec = derive2 { name="ArDec"; version="2.0"; sha256="14niggcq7xlvpdhxhy8j870gb11cpk4rwn9gwsfmcfvh49g58i80"; depends=[]; }; ArchaeoChron = derive2 { name="ArchaeoChron"; version="0.1"; sha256="1qma2432mm73h72g9ah1k02wlcb6yrhc6mpai9nj7v58s126ffxn"; depends=[ArchaeoPhases Bchron coda rjags]; }; ArchaeoPhases = derive2 { name="ArchaeoPhases"; version="1.3"; sha256="0012rjbk3bxf6j7p0skp02yrgqzl903dclnmm7c038f941krjcfq"; depends=[coda DT ggalt ggplot2 ggthemes hdrcde readr shiny shinythemes toOrdinal]; }; ArfimaMLM = derive2 { name="ArfimaMLM"; version="1.3"; sha256="0s5igf703zzvagsbdxf5yv4gn0vdq51b7fvbc8xkgvlmv91yy372"; depends=[fracdiff fractal lme4]; }; ArgumentCheck = derive2 { name="ArgumentCheck"; version="0.10.2"; sha256="0mgx7mzbg2wynixcf9hvs0i9p4zka7c3chrfvjmvvvwwgsy24hkc"; depends=[]; }; - Arothron = derive2 { name="Arothron"; version="1.0.1"; sha256="1zqc73i4bl9mbrijmfix4rl14ljh7sj0j1bdx6d65knscjr522sr"; depends=[compositions doParallel foreach geometry Morpho rgl Rvcg stringr vegan]; }; + Arothron = derive2 { name="Arothron"; version="1.0.2"; sha256="1nfdy0gwxm0xw0lp6245zz0ma481yf0yw4giisqpkkkg56snjjmx"; depends=[compositions doParallel foreach geometry Morpho rgl Rvcg stringr vegan]; }; ArrayBin = derive2 { name="ArrayBin"; version="0.2"; sha256="0jlhcv2d7pmqi32w71nz063ri1yj4i4isr3msnw7ckzvi9r42jwm"; depends=[SAGx]; }; - AsioHeaders = derive2 { name="AsioHeaders"; version="1.11.0-1"; sha256="1g226im9aakqdv5gynsl568w0mxcbfrny9lqid7pl984pq8xr8ks"; depends=[]; }; + AsioHeaders = derive2 { name="AsioHeaders"; version="1.12.1-1"; sha256="0phcagfjxrakkap0kffclcqjspb2rmhq81k934mxgh1qz5a68ksv"; depends=[]; }; AssayCorrector = derive2 { name="AssayCorrector"; version="2.0.0"; sha256="0d2444if5hyfbzyminnspw686r5l4pf9cdj9k48n2539vd61k452"; depends=[kSamples lattice latticeExtra RColorBrewer RVAideMemoire]; }; - AssetCorr = derive2 { name="AssetCorr"; version="1.0.1"; sha256="1ls08p120gn7mv7nfslc08dw159d001z57xx9wkyfz7v8r27qhsy"; depends=[boot ggplot2 mvQuad mvtnorm numDeriv Rdpack VineCopula]; }; + AssetCorr = derive2 { name="AssetCorr"; version="1.0.3"; sha256="0xcyj9xw895p4j03j9c76k7ylhkmf777akg4m90av12ad05njjbv"; depends=[boot ggplot2 mvQuad mvtnorm numDeriv Rdpack VineCopula]; }; AssetPricing = derive2 { name="AssetPricing"; version="1.0-1"; sha256="0pbb1362dgdipbj3h50ykissl3gdqf1j1mpq53ixprvyc966c5h4"; depends=[deSolve polynom]; }; AssocAFC = derive2 { name="AssocAFC"; version="1.0.2"; sha256="1rjiiir472dnr15xyvpn81s62nf01gl70khr8mrni65ssp5m30fb"; depends=[CompQuadForm]; }; AssocTests = derive2 { name="AssocTests"; version="0.0-4"; sha256="1fhqzbj4aj4srkiba79w8wdyc7yy701izklxqqa7lsifnca6gn4j"; depends=[cluster combinat fExtremes mvtnorm]; }; @@ -185,23 +192,24 @@ in with self; { BACCT = derive2 { name="BACCT"; version="1.0"; sha256="0bpm4l27vbblzi2hhfbjw2af3ic2jbnyghkvchpq8ww43k8068iv"; depends=[ggplot2 reshape2 rjags]; }; BACprior = derive2 { name="BACprior"; version="2.0"; sha256="1z9dvjq4lr99yp6c99bcv6n5jiiwfddfz4izcpfnnyvagfgizr8p"; depends=[boot leaps mvtnorm]; }; BAEssd = derive2 { name="BAEssd"; version="1.0.1"; sha256="04wkhcj4wm93hvmfnnzryswaylnxz5qsgnqky9lsx4jqhvg340l6"; depends=[mvtnorm]; }; - BALCONY = derive2 { name="BALCONY"; version="0.2.7"; sha256="1xdhldr6y3hrnp4g3zpplfcgiv0n8ci792hkaps9l47799vww03r"; depends=[Biostrings dplyr progress readr Rpdb scales seqinr]; }; - BAMBI = derive2 { name="BAMBI"; version="2.0.0"; sha256="09ib729h3wz1gbadsrlj2y05xbdwms9m4dhwmq9dfzm9v9qpw9n0"; depends=[bridgesampling coda future future_apply gtools label_switching lattice loo mvtnorm qrng RColorBrewer Rcpp RcppArmadillo rootSolve]; }; + BALCONY = derive2 { name="BALCONY"; version="0.2.8"; sha256="0qz7kzwglln9xa2ybxl72kkdw3ysc4wx1wxl94mzkgv01sf1bdhb"; depends=[Biostrings dplyr progress readr Rpdb scales seqinr]; }; + BALD = derive2 { name="BALD"; version="1.0.0-3"; sha256="1azyqami07g3ax60j0ws3d1qha65k0svn2v5c9pisni0qch5xql0"; depends=[lattice logspline rjags]; }; + BAMBI = derive2 { name="BAMBI"; version="2.0.1"; sha256="0mmigmgh37jbjnaafnisv7i30nfa605r2k3w22mpg1n3lcjdpmdk"; depends=[bridgesampling coda future_apply gtools label_switching lattice loo mvtnorm qrng RColorBrewer Rcpp RcppArmadillo rootSolve]; }; BAMMtools = derive2 { name="BAMMtools"; version="2.1.6"; sha256="01mb40w3g0xy93pl9064ky8kd46sa7qlz6by1r6kchcfhajx8plv"; depends=[ape gplots Rcpp]; }; BANEScarparkinglite = derive2 { name="BANEScarparkinglite"; version="0.1.2"; sha256="0yxsgk4p7i8arjkchsiml6lx97inpmaihb61787vcl8kxyx7v6wr"; depends=[dplyr httr lubridate RCurl readr rvest XML xml2 zoo]; }; BANOVA = derive2 { name="BANOVA"; version="1.1.1"; sha256="11cvf7wjip1vn5qn9hwxvdh98i8li9ijydfywf2ks2hls2430qbk"; depends=[coda rjags rstan runjags]; }; - BART = derive2 { name="BART"; version="1.8"; sha256="1nb1xj2v8d54fw4fppfsvai3q8csavqiksrybsc7imb4cfvdkw9h"; depends=[Rcpp survival]; }; - BAS = derive2 { name="BAS"; version="1.5.1"; sha256="0p1pjv8nx3jkjn8j9r87lngwgwxra3hh8qj6qklppnkznly533hr"; depends=[]; }; + BART = derive2 { name="BART"; version="1.9"; sha256="16k5cn81bywm9njvfnnid0dhq7fbmf875v4z7a3a90p0jxrgr902"; depends=[Rcpp survival]; }; + BAS = derive2 { name="BAS"; version="1.5.2"; sha256="1h8n7599svxyvmqd6mamj75w8i1li7q4fscs50a8irv9frhv5979"; depends=[]; }; BASIX = derive2 { name="BASIX"; version="1.1"; sha256="18dkvv1iwskfnlpl6xridcgqpalbbpm2616mvc3hfrc0b26v01id"; depends=[]; }; BASS = derive2 { name="BASS"; version="0.2.2"; sha256="1q3sihp2iv1ikggzgd2k3vh2myz8bz31rzlaavw0n84d0h1zjxy2"; depends=[]; }; - BASiNET = derive2 { name="BASiNET"; version="0.0.3"; sha256="0kcmc4jpiwmdydbyjfm1jx4ravxkqzvqca3p5gp26nx14xglm9hi"; depends=[Biostrings igraph randomForest rJava rmcfs RWeka]; }; - BAT = derive2 { name="BAT"; version="1.5.6"; sha256="0m6yfxymhzi8n2l421ngy6cz3qa5v7yrd1jhpi8ymlnf8dysd57x"; depends=[nls2 raster spatstat vegan]; }; + BASiNET = derive2 { name="BASiNET"; version="0.0.4"; sha256="0pmn4znqhpav729ai7zr027a7sx6bz2lmlk086crmwm1fnwipqq4"; depends=[Biostrings igraph randomForest rJava rmcfs RWeka]; }; + BAT = derive2 { name="BAT"; version="1.6.0"; sha256="056ygqpbqznysjzg4z96wrgfa4bwp1lf5qrv9bp6692r3ldq0485"; depends=[hypervolume nls2 raster spatstat vegan]; }; BAYESDEF = derive2 { name="BAYESDEF"; version="0.1.0"; sha256="030xskgqqg0n85mphjv32ks4ysvxb36f6ayy0176gps14jhmhcp7"; depends=[glmnet gWidgets readxl REdaS]; }; BAYSTAR = derive2 { name="BAYSTAR"; version="0.2-9"; sha256="0crillww1f1jvhjw639sf09lpc3wpzd69milah143gk9zlrkhmz2"; depends=[coda mvtnorm]; }; - BAwiR = derive2 { name="BAwiR"; version="1.1"; sha256="1wdwvghdhlld4iim49ia3k3g1rxrji8qh6jy63klglq6hb1rwx6c"; depends=[Anthropometry dplyr ggplot2 ggthemes hrbrthemes httr lubridate magrittr plyr purrr reshape2 rvest rworldmap scales stringi stringr tidyr xml2]; }; + BAwiR = derive2 { name="BAwiR"; version="1.1.3"; sha256="0p5hjv2c86y53nmzmrrvg5d706y760r19aiqcc6jqzj9rkq3iivw"; depends=[Anthropometry dplyr ggplot2 ggthemes hrbrthemes httr lubridate magrittr plyr purrr reshape2 rvest rworldmap scales stringi stringr tidyr xml2]; }; BB = derive2 { name="BB"; version="2014.10-1"; sha256="1lig3vxhyxy8cnic5bczms8pajmdvwr2ijad1rkdndpglving7x0"; depends=[quadprog]; }; BBEST = derive2 { name="BBEST"; version="0.1-6"; sha256="1hvgi3679ixpq0c5qbxhkp1j0953k3lklglgxrq9mz2ry6z9n038"; depends=[DEoptim ggplot2 reshape2 shiny wmtsa]; }; - BBI = derive2 { name="BBI"; version="0.2.0"; sha256="1mv6sh853y8p4by76637bky6yl57qyhmgqmd2n2k7r0cxg8hprcx"; depends=[vegan]; }; + BBI = derive2 { name="BBI"; version="0.3.0"; sha256="167sndfp3776p8n9zdpihc9xhqqi8wygzpl49dzkfj53gwa77rnn"; depends=[vegan]; }; BBMM = derive2 { name="BBMM"; version="3.0"; sha256="1cvv786wf1rr5906qg1di2krrv5jgw3dnyl8z2pvs8jyn0kb3fkj"; depends=[]; }; BBMV = derive2 { name="BBMV"; version="2.1"; sha256="11d4wd1zx99hrhwagw73jkk088rz5vgkjml6mckssc2iqvhj1dc9"; depends=[ape]; }; BBRecapture = derive2 { name="BBRecapture"; version="0.1"; sha256="05xzp5zjmkh0cyl47qfsz0l8drg8mimssybhycc4q69aif9scqxb"; depends=[HI lme4 locfit secr]; }; @@ -211,36 +219,37 @@ in with self; { BCC1997 = derive2 { name="BCC1997"; version="0.1.1"; sha256="1lqbivjkc7858jn54av1v9bzp0as43klgndbzkr59dc3l128xp12"; depends=[]; }; BCDating = derive2 { name="BCDating"; version="0.9.7"; sha256="0z3a95sc481p0n33mhg7qlsf1jynbm1vbfds0n03bsjrwvqkzpb2"; depends=[]; }; BCE = derive2 { name="BCE"; version="2.1"; sha256="0dqp08pbq7r88yhvlwgzzk9dcdln7awlliy5mfq18j5jhiy7axiz"; depends=[FME limSolve Matrix]; }; - BCEA = derive2 { name="BCEA"; version="2.2-5"; sha256="0jiizwnxycbz9x8fmkcw3rcjkgg5b9fawyddf8swvx23cnfm6z8z"; depends=[MASS]; }; + BCEA = derive2 { name="BCEA"; version="2.2-6"; sha256="1h1hgr0w6sidxfm58x6xz3i66prk5cxw6ldgfznr28pvrbgi5wsi"; depends=[MASS]; }; BCEE = derive2 { name="BCEE"; version="1.2"; sha256="08jsnsy7l182n0gy2jy0l9a7grr62g57gz3217fzapk2im2q648b"; depends=[BMA leaps Rcpp RcppArmadillo]; }; BCRA = derive2 { name="BCRA"; version="2.0"; sha256="1g0iix3ik2gsxpz6zp5fz2ka1y5xybs6x3r42ssnlffcmmdd9bsw"; depends=[]; }; BCSub = derive2 { name="BCSub"; version="0.5"; sha256="0c8dlxsx23qfyygmajg2amj78ax01kb3808d9hvy7g3hkgp2i2fp"; depends=[MASS mcclust nFactors Rcpp RcppArmadillo]; }; BCellMA = derive2 { name="BCellMA"; version="0.3.4"; sha256="1njprs7ksv0w18ffs0agz0290aa2akw48225iaa3bjhbl08dpidl"; depends=[ggplot2 reshape2]; }; BCgee = derive2 { name="BCgee"; version="0.1"; sha256="0ad0dj2ymgvkmcmq3jlpmn0pgigdql0xgvcwsbpdydv33a6snr04"; depends=[]; }; BClustLonG = derive2 { name="BClustLonG"; version="0.1.2"; sha256="0w35pwv3y00pmi4qjnzii3q44k7lk13x0cmh1zq3cl42gpi31p7f"; depends=[lme4 MASS mcclust Rcpp RcppArmadillo]; }; + BDP2 = derive2 { name="BDP2"; version="0.1.3"; sha256="14m85sigx6hk0qzhfgih43m2lxp9xczmp9g3z4pping6msbnbdrz"; depends=[rmarkdown shiny shinyBS]; }; BDWreg = derive2 { name="BDWreg"; version="1.2.0"; sha256="07j6dy69q1as1nwgp2790wzpzmjich2256cddhl7n3h2rs1dja74"; depends=[coda doParallel DWreg foreach MASS]; }; - BDgraph = derive2 { name="BDgraph"; version="2.51"; sha256="08cc9ab7ipkxm5jxg5qyq40l58jqf5yg02igxi3xbqrb946ynqqx"; depends=[igraph Matrix]; }; - BE = derive2 { name="BE"; version="0.1.0"; sha256="1mav5hvzsggh13szny0s0iy44di2jna523z8cjcy89s7nv2fqaag"; depends=[]; }; + BDgraph = derive2 { name="BDgraph"; version="2.52"; sha256="11if4abx2y0x92qwadl34d44qg1qlhmgdbhfqabhirbng553szcv"; depends=[igraph Matrix]; }; + BE = derive2 { name="BE"; version="0.1.1"; sha256="1ldzj1fvbgmnp0cn7g348md2xskm2q5b7y6l1sm3pa2am8jc7ixa"; depends=[rtf]; }; BEACH = derive2 { name="BEACH"; version="1.2.1"; sha256="0a6xwczw3d2jnksb5lpf7j859pnyfxcab4kfv4v7lmf9iasbyyf5"; depends=[devtools DT haven plyr readxl rJava rtf sas7bdat shiny WriteXLS xtable]; }; BEDASSLE = derive2 { name="BEDASSLE"; version="1.5"; sha256="1bz3lr0waly9vj9adwhmgs3lq7zjdkcbvm3y9rnn72qlrwmv5fbn"; depends=[emdbook MASS matrixcalc]; }; - BEDMatrix = derive2 { name="BEDMatrix"; version="1.4.0"; sha256="0aha33skksh45fx248lx6v8cxwgkiripw3avspb8arbld9rmqwxn"; depends=[BH crochet Rcpp]; }; + BEDMatrix = derive2 { name="BEDMatrix"; version="1.4.1"; sha256="1g92ayc6igz4qsf8g05m5628za4ipl2hy51khar0d54pkys5l1vw"; depends=[BH crochet Rcpp]; }; BEQI2 = derive2 { name="BEQI2"; version="2.0-0"; sha256="19q29kkwww5hziffkm2yx7n4cpfcsyh0z4mljdcnjkwfp732sjig"; depends=[jsonlite knitr markdown plyr reshape2 xtable]; }; BEST = derive2 { name="BEST"; version="0.5.1"; sha256="0yx3bkaaly0lriyd5xr7aay4c381a5iwanfixz9v37cmvs64rs4s"; depends=[coda HDInterval rjags]; }; - BETS = derive2 { name="BETS"; version="0.4.4"; sha256="0cfndahvqdma95sbyf4r3bhf6hxplkx7dmpcx41s1mqcr0bgnxvp"; depends=[DBI digest dplyr DT dygraphs forecast foreign ggplot2 grnn htmltools httr lubridate miniUI plotly rjson rmarkdown RMySQL rstudioapi rvest seasonal shiny sqldf stringr urca webshot xml2 zoo]; }; - BGData = derive2 { name="BGData"; version="1.0.0"; sha256="0xd7xpnvhpyvv6caxyif7wa25llvrnyzmmk4z6rp7absjqbz2alc"; depends=[BEDMatrix bigmemory bit ff LinkedMatrix symDMatrix]; }; - BGGE = derive2 { name="BGGE"; version="0.6.3"; sha256="0i7dz1j2p3nmqad6ja5b45maa3a1wn1gsh1g7sahyqr72s2bvvkn"; depends=[]; }; - BGLR = derive2 { name="BGLR"; version="1.0.5"; sha256="14a979rnasaklkfafzpkhr6mqv0ga7fsfxq63scpnlwa2aasgn83"; depends=[]; }; + BETS = derive2 { name="BETS"; version="0.4.9"; sha256="0daixk7mqmk2jq35i7mjaslz11gxbnnjgwxfvj8x1s88vz9l74sm"; depends=[DBI digest dplyr DT dygraphs forecast foreign ggplot2 grnn htmltools httr lubridate miniUI plotly rjson rmarkdown RMySQL rstudioapi rvest seasonal shiny sqldf stringr urca webshot xml2 zoo]; }; + BGData = derive2 { name="BGData"; version="2.0.0"; sha256="1jjzk81ipc7xidk21721pi761c7afnvf3qi91fv21q5ihkg5glvi"; depends=[BEDMatrix bigmemory bit crochet ff LinkedMatrix symDMatrix synchronicity]; }; + BGGE = derive2 { name="BGGE"; version="0.6.5"; sha256="1h76c40y45xhf2vp9g0q5j9lfwh16q9axbk5c9aqn4md008xr1j2"; depends=[]; }; + BGLR = derive2 { name="BGLR"; version="1.0.7"; sha256="061y08n4z6p013r0cqb9ff4myra5cchp6s2fgdhkw1sdlwy7ban7"; depends=[]; }; BGPhazard = derive2 { name="BGPhazard"; version="1.2.3"; sha256="1yp92y5y3xh0hb1ring6jrma8g4q6210hm9572j8ji1jkafzxjw1"; depends=[survival]; }; BGSIMD = derive2 { name="BGSIMD"; version="1.0"; sha256="0xkr56z8l72wps7faqi5pna1nzalc3qj09jvd3v9zy8s7zf5r7w4"; depends=[]; }; BH = derive2 { name="BH"; version="1.66.0-1"; sha256="14kab6wp0c27d8x4jqyf065p4bj210s9b67c0bfsfjnp29aypn8p"; depends=[]; }; BHH2 = derive2 { name="BHH2"; version="2016.05.31"; sha256="1m4fcx979nbm97hi89vbjjix0sx6qhdzs486risck9bi7yzih5k4"; depends=[]; }; BHMSMAfMRI = derive2 { name="BHMSMAfMRI"; version="1.1"; sha256="1qygizn2np9amkm1f1332zp9ab9ky423plr9lahgwzdxn1c2c5c2"; depends=[AnalyzeFMRI fmri wavethresh]; }; - BHTSpack = derive2 { name="BHTSpack"; version="0.4"; sha256="15a1xx2j6s94jrhlbbkriqzs7wfbh2nkz564zvmn20czmaf7v5iq"; depends=[R2HTML xtable]; }; + BHTSpack = derive2 { name="BHTSpack"; version="0.5"; sha256="1sz99sgxhiajxca5bx2ns9g9qs9ymsvh8i5882nlp7c78qxmqc4g"; depends=[R2HTML xtable]; }; BICORN = derive2 { name="BICORN"; version="0.1.0"; sha256="0mqk8vgp6jdk7f0paa06yqlibkd1y3vs69pg7i9mkvxmda7p4nkq"; depends=[]; }; BIEN = derive2 { name="BIEN"; version="1.2.3"; sha256="0p23kahba55gkk6wx10ii6vrni3b7ia2a4jb64ww4kwp86bknx3d"; depends=[ape DBI rgdal rgeos RPostgreSQL sp]; }; - BIFIEsurvey = derive2 { name="BIFIEsurvey"; version="2.5-44"; sha256="16mgbf2jpz3fkn1gb8xcc8h45k8p74sq5gp2kk8q2g3z7gg697xh"; depends=[miceadds mitools Rcpp RcppArmadillo survey TAM]; }; + BIFIEsurvey = derive2 { name="BIFIEsurvey"; version="2.191-12"; sha256="13my1yz7q40fg79m1klfqi0ngbfmkj0k6p8a1fvzl11xcwiszn44"; depends=[miceadds mitools Rcpp RcppArmadillo survey TAM]; }; BIGDAWG = derive2 { name="BIGDAWG"; version="2.1"; sha256="0zvy5sl94qi20gdrnxb2lmadfy7p0wqfngjsf6jc2cgwyzk4gnrj"; depends=[haplo_stats httr knitr rmarkdown XML]; }; - BIGL = derive2 { name="BIGL"; version="1.2.0"; sha256="1n14ar765iqafi8ckpghxrafivmpf583yckfxk07haz4186klvss"; depends=[ggplot2 MASS minpack_lm numDeriv progress rgl robustbase scales]; }; + BIGL = derive2 { name="BIGL"; version="1.2.2"; sha256="0zrp6mrsjmac2z8syh8216zcr7yy60y4yr2xfvmd4cxdnsc198hr"; depends=[ggplot2 MASS minpack_lm numDeriv progress rgl robustbase scales]; }; BINCOR = derive2 { name="BINCOR"; version="0.2.0"; sha256="0x2s82jql429shk70bhjdy9kamz8dz5ymsxj6kp8ga1711bpwyq6"; depends=[pracma]; }; BIOM_utils = derive2 { name="BIOM.utils"; version="0.9"; sha256="0xckhdvf15a62awfk9rjyqbi6rm7p4awxz7vg2m7bqiqzdll80p7"; depends=[]; }; BIOMASS = derive2 { name="BIOMASS"; version="1.2"; sha256="1d9rwgh0ws27yd0p2la7pn49sb71lh9bg4f42fpx448ah8dimw17"; depends=[httr jsonlite minpack_lm msm raster]; }; @@ -249,19 +258,21 @@ in with self; { BKPC = derive2 { name="BKPC"; version="1.0.1"; sha256="17gmhf6qq8jn2xzkqvjq60xzy0slz6kgfpd0d6hlpnf30ww7q923"; depends=[kernlab]; }; BLCOP = derive2 { name="BLCOP"; version="0.3.1"; sha256="1qfkljw5b1k4b5jd08hw6dsmvgr7vg3kjyib5s13q0mkxvclasym"; depends=[fBasics fMultivar fPortfolio MASS quadprog RUnit timeSeries]; }; BLModel = derive2 { name="BLModel"; version="1.0.2"; sha256="0l5f2v5ggadmrci3qhhmxm3j9i6jii0anq5rv5vk50y2qzii2q15"; depends=[]; }; - BLPestimatoR = derive2 { name="BLPestimatoR"; version="0.1.5"; sha256="0wnxfyl8hz1a0k33v5nc3j1ziwcv1fnw8639l0xv92p5rn7n5nc5"; depends=[mvQuad numDeriv randtoolbox Rcpp ucminf]; }; - BLR = derive2 { name="BLR"; version="1.4"; sha256="0wy3c8nnzkdhwb5s1ygdid47hpdx72ryim36mnicrydy0msjivja"; depends=[SuppDists]; }; + BLOQ = derive2 { name="BLOQ"; version="0.1-0"; sha256="1ag0dy3cjdxhlspmzfdnpli030g6gwac50n5s30igcyrmw6kl4hf"; depends=[maxLik mvnmle mvtnorm]; }; + BLPestimatoR = derive2 { name="BLPestimatoR"; version="0.2.5"; sha256="19kxvmwfa9mzq2lxlszai8zbag13m5dp600xhvwjjlmc5pg4fs3g"; depends=[Formula mvQuad numDeriv randtoolbox Rcpp RcppArmadillo]; }; + BLR = derive2 { name="BLR"; version="1.5"; sha256="1aj4qs0zjca2ifx3y4a0s6c59lbsgracili2an5nr2rxnsl10aw6"; depends=[SuppDists]; }; BLRPM = derive2 { name="BLRPM"; version="1.0"; sha256="15q0jkw4swz35c58nv23k8g1dy1kkbqh5aydjck7pd0fmppqrhpx"; depends=[R6]; }; BLSM = derive2 { name="BLSM"; version="0.1.0"; sha256="02xidwp91rh34rcqd0q552wzm2j80axs1nnwwv2aj04g96lf7myj"; depends=[Rcpp RcppEigen]; }; - BMA = derive2 { name="BMA"; version="3.18.8"; sha256="1a32ghn17ymb3zdh9xv6zvqcxc81m4y478mk6z9bfndq7ihy1ih5"; depends=[inline leaps robustbase rrcov survival]; }; + BMA = derive2 { name="BMA"; version="3.18.9"; sha256="1lwgjswjiiyzxjpbpr61lcppgkz2d6m3vhgz7qpg33jg2mvdkvjy"; depends=[inline leaps robustbase rrcov survival]; }; BMAmevt = derive2 { name="BMAmevt"; version="1.0.1"; sha256="1krx8isj2wp3panjcbc2ysrc2pxz2casj12qq9p18imaa326l53y"; depends=[coda]; }; - BMRBr = derive2 { name="BMRBr"; version="0.1.0"; sha256="1z54annplzydnxvwd0rkhcw5rmfx8r99k28ld5rgh22xq3zdq825"; depends=[rvest xml2]; }; + BMRBr = derive2 { name="BMRBr"; version="0.2.0"; sha256="0v2ysap5jfkq9fc5blqlfhsv2bs8rqybmp5z4q3g6y3y7qzhypjw"; depends=[rvest xml2]; }; BMRV = derive2 { name="BMRV"; version="1.32"; sha256="1j1cwjk3l7f06nqdwrqdyhzm43bb8hj5wgdd14zc1grxyfc9ya95"; depends=[BH]; }; BMS = derive2 { name="BMS"; version="0.3.4"; sha256="0z3mk1xd1fphf80kdbashkn04jwsr2bghms4d7nav3pw73q41wql"; depends=[]; }; + BMSC = derive2 { name="BMSC"; version="0.1.1"; sha256="0dpyb01bmfa9qgrj60hdmbgp0mln96zx7ndiljwz7ylpg8myj8sl"; depends=[BH dplyr ggplot2 loo R_utils Rcpp RcppEigen rstan rstantools StanHeaders]; }; BMT = derive2 { name="BMT"; version="0.1.0.3"; sha256="1vdah5bsn41s2qriq15xi7dw9qzngaacmn5gk6yc7hi89dwyy3yj"; depends=[fitdistrplus partitions]; }; BMhyb = derive2 { name="BMhyb"; version="1.5.2"; sha256="0sf12xibr22i3pqdb7zay1mmgfnvqxdlimsbd8y5pi4ybiqz8bl8"; depends=[ape corpcor DEoptim geiger lhs Matrix mvtnorm numDeriv phylobase phytools TreeSim viridis]; }; BMhyd = derive2 { name="BMhyd"; version="1.2-8"; sha256="14pv5f621zq5x9i408zjm8k80hcsabkjpdf86gk3ylgw5yqcivrx"; depends=[ape corpcor geiger mvtnorm numDeriv phylobase phytools TreeSim]; }; - BMisc = derive2 { name="BMisc"; version="1.2.0"; sha256="0mfwa3614xgvlwl44r9p3ic34z9q9qilnhvb8p95s40xi622wphy"; depends=[formula_tools plm]; }; + BMisc = derive2 { name="BMisc"; version="1.3.1"; sha256="0wh17bf1ii6zan09n59cf9257nb60nh08ig01id9k0bvm9f14ay6"; depends=[formula_tools plm]; }; BNDataGenerator = derive2 { name="BNDataGenerator"; version="1.0"; sha256="17zi83jhpn9ygavkpr9haffvd4622sca18jzzxxxmfq0ilrj201g"; depends=[]; }; BNN = derive2 { name="BNN"; version="1.0.2"; sha256="13h9xqfdqnc9d8brx1xlmvb4nrkpwncwjz98y7i3wijih85wkikd"; depends=[mvtnorm]; }; BNPMIXcluster = derive2 { name="BNPMIXcluster"; version="1.2.4"; sha256="06s0cs3anbby93n7pjcin9195agfzfq9im6f9k7ih3cbg8mzfaqy"; depends=[gplots MASS matrixcalc mvtnorm plyr Rcpp RcppArmadillo truncnorm]; }; @@ -269,10 +280,12 @@ in with self; { BNPTSclust = derive2 { name="BNPTSclust"; version="1.1"; sha256="1zmxwg6zn3nqqm1sw2n4pvq47mv7ygb4lf1c6yhn3xaf1rqmf26s"; depends=[MASS mvtnorm]; }; BNPdensity = derive2 { name="BNPdensity"; version="2017.03"; sha256="0anpi75wwx91dbm937ydgcpd8wchm0nyciy4xdhppsvzq9v3d2hp"; depends=[]; }; BNSL = derive2 { name="BNSL"; version="0.1.3"; sha256="1918dc73gasac45kzcf4pxvl8iaawzkqdi03ny0napbjr3z8rss2"; depends=[bnlearn igraph Rcpp]; }; - BNSP = derive2 { name="BNSP"; version="2.0.6"; sha256="0phi41khw525nsrizxak933j2hlhpkgdskvwv8yqljhvyamxgaql"; depends=[coda cubature Formula ggplot2 gridExtra plot3D plyr threejs]; }; + BNSP = derive2 { name="BNSP"; version="2.0.8"; sha256="03pl4rvcrsd471nb56rsichzyay57ij1pqn3vvi3dpnr6rnfv4xm"; depends=[coda cubature Formula ggplot2 gridExtra mgcv plot3D plyr threejs]; }; BOG = derive2 { name="BOG"; version="2.0"; sha256="0lz5af813b67hfl4hzcydn58sjhgn5706n2h44g488bks928k940"; depends=[DIME hash]; }; - BOIN = derive2 { name="BOIN"; version="2.6.3"; sha256="0hvx75zjb5bj005ggj9j67p9f8hpq8p6c0ihidf3avfrirl8g98p"; depends=[Iso]; }; - BPEC = derive2 { name="BPEC"; version="1.2.1"; sha256="142x0iw3sanvqm0n2hfba8pwndfk8l5qzhgpca9gcya7wkcmmmf7"; depends=[ape coda fields ggmap ggplot2 igraph maptools mvtnorm OpenStreetMap phytools R2G2 sp]; }; + BOIN = derive2 { name="BOIN"; version="2.6.4"; sha256="0p1205pxa5a9sbw88fm8lbvzgzyq3mf62lsp0l2c0sfsvcfpydkg"; depends=[Iso]; }; + BPEC = derive2 { name="BPEC"; version="1.3.0"; sha256="0chdp7g75a6hajq7h1lbl0zima22myah9a66m06zga274plakdq2"; depends=[ape coda fields ggmap ggplot2 igraph maptools mvtnorm OpenStreetMap phytools sp]; }; + BRETIGEA = derive2 { name="BRETIGEA"; version="1.0.0"; sha256="176z7ajyfcfljv36d2sa15cvw047rsir3gn0l4lxmcyliw93r4lv"; depends=[]; }; + BRISC = derive2 { name="BRISC"; version="0.1.0"; sha256="0fkh7wv9lf7fckh5xn4xygh6k792j8j6ax7kwqw7m4qqvl7gds44"; depends=[matrixStats pbapply RANN rdist]; }; BRugs = derive2 { name="BRugs"; version="0.9-0"; sha256="0f0v30mvfw97vfwzkjpqzf2894b2yhksja0xhpranprk135srxp0"; depends=[coda]; }; BSDA = derive2 { name="BSDA"; version="1.2.0"; sha256="0gs33yyca45jd4f5k5f7qid4ayw2rnl2wl7a6m7vf39dfx7ympm2"; depends=[e1071 lattice]; }; BSGS = derive2 { name="BSGS"; version="2.0"; sha256="08m8g4zbsp55msqbic4f17lcry07mdn0f5a61zdcy2msn2ihzzf9"; depends=[batchmeans MASS plyr pscl]; }; @@ -291,7 +304,7 @@ in with self; { BUCSS = derive2 { name="BUCSS"; version="1.0.0"; sha256="133wsv784abrs6s1rhdi65qdrw5wx806r6pf76g3vbsf2qhk51qb"; depends=[]; }; BVS = derive2 { name="BVS"; version="4.12.1"; sha256="111g61bpwh80v6gy44q087swcrnnnzdcibm22pzzi9jsfphy6l0c"; depends=[haplo_stats MASS msm]; }; BVSNLP = derive2 { name="BVSNLP"; version="1.1.5"; sha256="1m6cpxm6pd831472qzj370f6q9sf416zd6ixphg3yqvvakgdznv8"; depends=[doParallel foreach Rcpp RcppArmadillo RcppEigen RcppNumerical]; }; - BWStest = derive2 { name="BWStest"; version="0.2.1"; sha256="1kwd1s1dd21qca31np49aql839j8325y8bnxlcq84nw48vqv0jgc"; depends=[memoise Rcpp]; }; + BWStest = derive2 { name="BWStest"; version="0.2.2"; sha256="02amzlfprmw5pyis0dg0kg0x8xqh50a4vfdcxxmklrzik3b1vzzs"; depends=[memoise Rcpp]; }; BaBooN = derive2 { name="BaBooN"; version="0.2-0"; sha256="145q2kabjks2ql3m48sfjis5y35l8rcqnr5s176viv9yhfafn351"; depends=[coda Hmisc MASS nnet Rcpp RcppArmadillo]; }; BaM = derive2 { name="BaM"; version="1.0.1"; sha256="0y8m6mhghlrp379swj9cfrzqcdr3a7y29mx4d6zld4is00wdw16b"; depends=[coda dlm MASS mice nnet]; }; BaPreStoPro = derive2 { name="BaPreStoPro"; version="0.1"; sha256="0zyyyrr5h8dhjsmgaii8jmb8ignvixpc9nzbfishw9yymjswvm57"; depends=[]; }; @@ -299,24 +312,25 @@ in with self; { BaTFLED3D = derive2 { name="BaTFLED3D"; version="0.2.11"; sha256="0gab9iz1ra72hw8j31n97ysyr3cclhgvdxriyjk8wwv2nrmbw12h"; depends=[foreach iterators R6 RColorBrewer rTensor]; }; BacArena = derive2 { name="BacArena"; version="1.7"; sha256="137n3nyz68v912c5nhq1qslgifb7k797f5sz567smhimzjhx842f"; depends=[deSolve ggplot2 glpkAPI igraph Matrix plyr Rcpp RcppArmadillo RcppEigen ReacTran reshape2 sybil]; }; BalanceCheck = derive2 { name="BalanceCheck"; version="0.1"; sha256="09mkssic173glgcn592cb6zmz80kndggqc4hc800f91xnfql0332"; depends=[ade4 mvtnorm]; }; - BalancedSampling = derive2 { name="BalancedSampling"; version="1.5.2"; sha256="0a4mb5lwjcy5d3h0ypsqmqniqx3dm64mssj65apgl48wqbm6zvv0"; depends=[Rcpp]; }; - Ball = derive2 { name="Ball"; version="1.2.0"; sha256="1x3l3bg4mn5kvm98p1ypn7gi61q2wm1224n9d99x1pms1iqhx4zv"; depends=[gam survival]; }; + BalancedSampling = derive2 { name="BalancedSampling"; version="1.5.4"; sha256="01vnq8n0w9h7p5xpvfdhipdqcj82in0zhj61kvcmz7jx9grx22vi"; depends=[Rcpp SamplingBigData]; }; + Ball = derive2 { name="Ball"; version="1.3.0"; sha256="16rb4yj08dbnk3yj1d0nhr9iw2kgzjzp5cbwy8kcwc3ndhaxwdpa"; depends=[gam mvtnorm survival]; }; BarBorGradient = derive2 { name="BarBorGradient"; version="1.0.5"; sha256="0g2g7hrm23as1xbj79g48r8sj3gsj66fmi895jqlqfbqrl2fl7a5"; depends=[]; }; BarcodingR = derive2 { name="BarcodingR"; version="1.0-2"; sha256="1mn5rdax8v1s2z3apk9z0kzy4hw19m8ql6j91l6wd29g2n2bjqxx"; depends=[ape class nnet sp]; }; Barnard = derive2 { name="Barnard"; version="1.8"; sha256="1ki58hjs5kpmp76kwj1qi6hwmdvjphqb1lvrlhnmkgqxg4hw4vqg"; depends=[]; }; Barycenter = derive2 { name="Barycenter"; version="1.3.1"; sha256="0yhc0wwjqms569gnm8z2l9hgcbw8lyy437ynkij47pa4c1a1qvjy"; depends=[Rcpp RcppArmadillo]; }; BatchExperiments = derive2 { name="BatchExperiments"; version="1.4.2"; sha256="0zvcpgzhbna6p37jlf57j7mzrvh5xs5w17janmv9v4210cpbzi1q"; depends=[backports BatchJobs BBmisc checkmate data_table DBI RSQLite]; }; - BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="2.1"; sha256="1mc35y3zxmijgywfd1qhvlpb66rzc8n6j3ynvfrg5c7z8j8592h3"; depends=[curl dplyr quantmod rvest stringr tidyr XML]; }; + BatchGetSymbols = derive2 { name="BatchGetSymbols"; version="2.2"; sha256="0xssci49wf3jg8hhlycf9jy8mdxlizxh1hwr0xacwsbf38wvnas3"; depends=[curl dplyr lubridate quantmod rvest stringr tidyr XML]; }; BatchJobs = derive2 { name="BatchJobs"; version="1.7"; sha256="035658marnw57p4f38g99rwmvmb6hpbq0fhlxp3qbw22zfnnkvs9"; depends=[backports BBmisc brew checkmate data_table DBI digest RSQLite sendmailR stringi]; }; BatchMap = derive2 { name="BatchMap"; version="1.0.2.0"; sha256="0v3k4xrmsbyhzgmph8xna11dgpp10yxqmss95asrj6n814jxj19b"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; }; BayClone2 = derive2 { name="BayClone2"; version="1.1"; sha256="1wprdj22zh8fwqawcv4m2n2y7sqwh2f6m9b0cq0rp4ll774yz30i"; depends=[combinat]; }; BayHap = derive2 { name="BayHap"; version="1.0.1"; sha256="0xqnl2cbf0pyjlpywyy0j4mwknfn8msz4s719dsri3r7hvn9m6kd"; depends=[boa]; }; BayHaz = derive2 { name="BayHaz"; version="0.1-3"; sha256="08ilghlkgyma5758yw7mdgqycqcillqmx73knzzdlg2kzc77dvg6"; depends=[]; }; - BayLum = derive2 { name="BayLum"; version="0.1.2"; sha256="172ynm4z1m8dc954q4x9vwc2lyxqbwmqaxmz8v49jm8r2ifv7h8c"; depends=[ArchaeoPhases coda hexbin Luminescence rjags]; }; + BayLum = derive2 { name="BayLum"; version="0.1.3"; sha256="0hina84s8ax01zpnji4jqqkdap0phvxr78s4rnab0407xrydbf0w"; depends=[ArchaeoPhases coda hexbin KernSmooth Luminescence rjags]; }; BaySIC = derive2 { name="BaySIC"; version="1.0"; sha256="023ji6q1nvksmhp3ny8ad39xxccc0a1rv9iaiaagwavgzzc0pjd9"; depends=[fields poibin rjags]; }; BayesBD = derive2 { name="BayesBD"; version="1.2"; sha256="10ik2lndqgmy6pvdm6cx4fsxgjb2fgi6hlz5ic35ab7fkpi90ka5"; depends=[jpeg mritc png Rcpp RcppArmadillo shiny]; }; BayesBinMix = derive2 { name="BayesBinMix"; version="1.4.1"; sha256="1b18qg0mjbmrilwqffrq33gw04fzask2xgj1bp4cli51cjf2slf7"; depends=[coda doParallel foreach label_switching]; }; BayesCR = derive2 { name="BayesCR"; version="2.1"; sha256="1qav7l64iqqdvr1v6c7hlzvbx7zbvsa55pyisvkq5rsayy1rdsl1"; depends=[mnormt mvtnorm rootSolve truncdist]; }; + BayesCTDesign = derive2 { name="BayesCTDesign"; version="0.5.0"; sha256="0q37q2mwvg9616chr2xzgd4mrpv9rqsqq9p0lc02gi35ay7hafcp"; depends=[eha ggplot2 reshape2 survival]; }; BayesCombo = derive2 { name="BayesCombo"; version="1.0"; sha256="01rzjja0xzvqyjivl8a9da13v13ylm4dwv4f27cmgz2znakfg5y8"; depends=[]; }; BayesComm = derive2 { name="BayesComm"; version="0.1-2"; sha256="1rrbvwcfm93cw0m33g0zn6nyshfjc97kb3fby9cga0zaixc0a8rk"; depends=[abind coda mvtnorm Rcpp RcppArmadillo]; }; BayesDA = derive2 { name="BayesDA"; version="2012.04-1"; sha256="0fp27cmhw8dsxr4mc1flm6qh907476kph8ch2889g9p31xm1psjc"; depends=[]; }; @@ -324,18 +338,19 @@ in with self; { BayesFM = derive2 { name="BayesFM"; version="0.1.2"; sha256="0fiw2x29cpv3prywsbvs1m8a588s2wpi3bwzzjisi2rafbl619xd"; depends=[checkmate coda ggplot2 gridExtra plyr]; }; BayesFactor = derive2 { name="BayesFactor"; version="0.9.12-4.2"; sha256="1z083v7is21gm0a458jm5ph3xfdm7mh29a6sg2r1njq82f8x3s3g"; depends=[coda gtools hypergeo Matrix MatrixModels mvtnorm pbapply Rcpp RcppEigen stringr]; }; BayesGESM = derive2 { name="BayesGESM"; version="1.4"; sha256="0qw2byb48f67461m1k8a1rqh6a0c3zq1rc4ni9xzxv8dih4wkq0f"; depends=[Formula GIGrvg normalp]; }; - BayesGOF = derive2 { name="BayesGOF"; version="4.0"; sha256="10y36qyp674kgw08wrb6drd942314frw4ilkwna6qg6nqh07jzbk"; depends=[Bolstad2 nleqslv orthopolynom VGAM]; }; + BayesGOF = derive2 { name="BayesGOF"; version="5.2"; sha256="17wm0228xq3db431abyi9jr0q1q86nnajsn7hmy4dwzgvrlz5s0i"; depends=[Bolstad2 nleqslv orthopolynom VGAM]; }; BayesH = derive2 { name="BayesH"; version="1.0"; sha256="0mjd1i3rkhyq3qcalq0ing0ap0igbhyvczaihl4pcfidgs70bci3"; depends=[]; }; BayesLCA = derive2 { name="BayesLCA"; version="1.7"; sha256="0lsqgjqal9092v1wr07p8g5cqm24k2d80sp7hlr7r1xknakmm1b6"; depends=[coda e1071 fields MCMCpack nlme]; }; BayesMAMS = derive2 { name="BayesMAMS"; version="0.1"; sha256="1qq3j9nm0k58gpyfavz77v1dwghy8pmpk0v52cj7l8sb3a3aiinm"; depends=[mvtnorm]; }; + BayesMallows = derive2 { name="BayesMallows"; version="0.1.1"; sha256="0z9zc3m0qiyi731z323sfafp1bj3gwvl1ii9hvb4lsk2q8n858np"; depends=[cowplot dplyr ggplot2 HDInterval igraph purrr Rcpp RcppArmadillo Rdpack relations rlang sets tidyr]; }; BayesMed = derive2 { name="BayesMed"; version="1.0.1"; sha256="1ysc7sh0drqxbisi2dz6gj4jlw6qsd879bbhr5pra7nxgmk4h650"; depends=[MCMCpack polspline QRM R2jags]; }; BayesMixSurv = derive2 { name="BayesMixSurv"; version="0.9.1"; sha256="19kf39881q00pap9afwvvggk4s4w3qpz17b7065nig1mvk8dnp8r"; depends=[survival]; }; BayesNI = derive2 { name="BayesNI"; version="0.1"; sha256="0zvr6rkb5zxgl53xby69d0j3yrfnlcmac6kwkxz77q5616w9dwq0"; depends=[]; }; - BayesNetBP = derive2 { name="BayesNetBP"; version="1.3.0"; sha256="01blqc48ssgr3dg5bk7yzwpa59n3ja1dggglwm2441dwjxf10vxx"; depends=[bnlearn doBy fields graph gRbase igraph qtl qtlnet RColorBrewer Rgraphviz]; }; + BayesNetBP = derive2 { name="BayesNetBP"; version="1.4.0"; sha256="007anxk76rxwskc7fvbmaw7ihjnwqad0xmiy6iyv68lwrjifvpc2"; depends=[bnlearn doBy fields graph igraph qtl qtlnet RColorBrewer Rgraphviz]; }; BayesPieceHazSelect = derive2 { name="BayesPieceHazSelect"; version="1.1.0"; sha256="0znbmv7crqycdx75jh02h6z8d6cifjszbrldv2yva4mkjxsydag5"; depends=[mvtnorm]; }; BayesPiecewiseICAR = derive2 { name="BayesPiecewiseICAR"; version="0.2.1"; sha256="1qrmw7zmygdzz84p76hyh2d8dx88b8xhbbd7radqm39g35zq5wz6"; depends=[mvtnorm]; }; BayesRS = derive2 { name="BayesRS"; version="0.1.3"; sha256="0fhvnckabp0z1cdsbjgv3ijnzaxwhrk83fwcflgqbhvm3a9lzr77"; depends=[coda ggplot2 metRology reshape rjags]; }; - BayesS5 = derive2 { name="BayesS5"; version="1.30"; sha256="1nx61sq1d20238hbgr9p9hrmnxsxpsjhnb4sdhmqg1m7klq8qyrw"; depends=[abind Matrix snowfall]; }; + BayesS5 = derive2 { name="BayesS5"; version="1.31"; sha256="1azxn3r0s52zy6y5qsa6yx331795mkk7fb28fcinv2zx9iyvk33w"; depends=[abind Matrix snowfall]; }; BayesSAE = derive2 { name="BayesSAE"; version="1.0-2"; sha256="1xbx9hr254agpcqs1fl7qi7h19fd2bbmjszn44l566n2svgvxwf5"; depends=[coda Formula lattice]; }; BayesSingleSub = derive2 { name="BayesSingleSub"; version="0.6.2"; sha256="0hgmyhg4mpxx7k91hbfa9h3533mqyn9rz4kl9kb30cc9g7g0m045"; depends=[coda MCMCpack mvtnorm]; }; BayesSpec = derive2 { name="BayesSpec"; version="0.5.3"; sha256="17gchdijcjhbr2y4glbq9szjh4qmgivzh6p4fllh589da18nzjcr"; depends=[mvtnorm pscl trust]; }; @@ -350,7 +365,7 @@ in with self; { BayesianAnimalTracker = derive2 { name="BayesianAnimalTracker"; version="1.2"; sha256="1pgjijqznfdpvw296h5vksnxgspxs7qhy6s84ww7abnlhg59bz5s"; depends=[TrackReconstruction]; }; BayesianGLasso = derive2 { name="BayesianGLasso"; version="0.2.0"; sha256="09yb1qqx6qlsspk3ndrcqxy0956iqznw0rmyvqxgxxp3zd3y21xp"; depends=[MASS statmod]; }; BayesianNetwork = derive2 { name="BayesianNetwork"; version="0.1.3"; sha256="1lli3v922cvp1kwg4sllgvm4rnb972anlpl0lklqk3aqi7ff6flw"; depends=[bnlearn heatmaply lattice networkD3 plotly rintrojs shiny shinyAce shinydashboard]; }; - BayesianTools = derive2 { name="BayesianTools"; version="0.1.4"; sha256="13imh2vc3picfy1ppzfisgkhk2n8w8s0fnhklkni06wz1816h2zd"; depends=[bridgesampling coda DHARMa ellipse emulator IDPmisc MASS Matrix msm mvtnorm numDeriv Rcpp tmvtnorm]; }; + BayesianTools = derive2 { name="BayesianTools"; version="0.1.5"; sha256="02mwjy19y4mvqwqyc9b56l27gq40nrjq22dj7s12bip8bzqlh9gk"; depends=[bridgesampling coda DHARMa ellipse emulator IDPmisc MASS Matrix msm mvtnorm numDeriv Rcpp tmvtnorm]; }; Bayesianbetareg = derive2 { name="Bayesianbetareg"; version="1.2"; sha256="0imsz2761ngbnap0vnxks9527la51m5g8gkkn1vrgwis43i6qcgs"; depends=[betareg mvtnorm]; }; BaylorEdPsych = derive2 { name="BaylorEdPsych"; version="0.5"; sha256="1kq6nvzdqwawygp7k62lw5hyccsj81jg82hq60yidgxnmmnnf7y2"; depends=[]; }; BcDiag = derive2 { name="BcDiag"; version="1.0.10"; sha256="1gyinmx5wn2kk70hiy28ghilkhfirfjbfqdrqq5h3wfb4khnq6pz"; depends=[fabia]; }; @@ -359,7 +374,7 @@ in with self; { BeSS = derive2 { name="BeSS"; version="1.0.5"; sha256="1gq0zfrzkh2cndly7amhjy0qnfb60lsj7izmdlf2m8h7yrcicjzv"; depends=[glmnet Matrix Rcpp RcppEigen survival]; }; Benchmarking = derive2 { name="Benchmarking"; version="0.27"; sha256="0y31l3ddxm16sylw7p6dnv39w9ydjkjn92gi0za7s0vx07mzimxp"; depends=[lpSolveAPI ucminf]; }; BenfordTests = derive2 { name="BenfordTests"; version="1.2.0"; sha256="1nnj0w0zwcmg7maqmmpixx7alvsyxva370ssc26ahg6kxy5a621w"; depends=[]; }; - Bergm = derive2 { name="Bergm"; version="4.1.0"; sha256="13qdcwycppwy9qqc42zi5fz6wg4a47pfczb3nnfj1bdn2drxqw2x"; depends=[coda ergm Matrix MCMCpack mvtnorm network]; }; + Bergm = derive2 { name="Bergm"; version="4.2.0"; sha256="04w9brzjl51nvrvyp2zn00xfcbyp1q55h4x6m7d60610fbn7f60m"; depends=[coda ergm Matrix MCMCpack mvtnorm network]; }; Bessel = derive2 { name="Bessel"; version="0.5-5"; sha256="1apcpwqgnbsn544x2mfjkp4136xn33pijazmbzas7lr14syl5a6b"; depends=[Rmpfr]; }; BetaBit = derive2 { name="BetaBit"; version="1.3"; sha256="1x9mfnijgi8726p82d52g2zgmliwsc97v2g96mz9ccz2vqqnwq4w"; depends=[digest]; }; BeviMed = derive2 { name="BeviMed"; version="5.3"; sha256="01q5pr776ki973bcld20cqpsz9f10bb30vj95da9gbz5af6bvb14"; depends=[Rcpp]; }; @@ -375,12 +390,12 @@ in with self; { BigQuic = derive2 { name="BigQuic"; version="1.1-8"; sha256="1kg48jqm62qmz5x0h6fgvd5fs5dvg51x4spsn1q503ag4dqqdjc0"; depends=[Matrix Rcpp scalreg]; }; BigSEM = derive2 { name="BigSEM"; version="0.2"; sha256="091fdibcxd8a8kf9k4pvc1sah830wh179f28gag9g816h4qclnx9"; depends=[MASS parcor]; }; BigTSP = derive2 { name="BigTSP"; version="1.0"; sha256="1jdpa8rcnrhzn0hilb422pdxprdljrzpgr4f26668c1vv0kd6k4v"; depends=[gbm glmnet randomForest tree]; }; - BigVAR = derive2 { name="BigVAR"; version="1.0.2"; sha256="14vb6nc6bn22dd112sg9zypkchmkv17gnwxs915k0k5vbb9czlr5"; depends=[lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; - BimodalIndex = derive2 { name="BimodalIndex"; version="1.1.5"; sha256="08hkdpvwvi5vczc9hdzbk5qnr6s44wyf6n0xv0zbd51dqcmv2xbk"; depends=[mclust oompaBase]; }; + BigVAR = derive2 { name="BigVAR"; version="1.0.3"; sha256="0065amdg71i9lmv7illlxgxaiyb7lvpkc68ah5vgflb6l0djisb9"; depends=[lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; + BimodalIndex = derive2 { name="BimodalIndex"; version="1.1.7"; sha256="1mxyrybxxkcm6nah227cx5mhddzq6k2pf1mmm5wl7jv1br43xdm8"; depends=[mclust oompaBase]; }; BinNonNor = derive2 { name="BinNonNor"; version="1.4"; sha256="00405ww9mh910jqww60w7cb8qbjql2jn13m60ly0bnxilg44r0bb"; depends=[BB corpcor Matrix mvtnorm]; }; BinNor = derive2 { name="BinNor"; version="2.2"; sha256="03cggpk9fhndnk9vv5i6fzsq4wjxc5405xxlxg3l9gb618kj437f"; depends=[corpcor Matrix mvtnorm psych]; }; BinOrdNonNor = derive2 { name="BinOrdNonNor"; version="1.4"; sha256="0qiy0wf9i9r44ycz1jl666nwpsv5yz7vzz1szdy22sk68lz984bv"; depends=[BB corpcor GenOrd Matrix mvtnorm OrdNor]; }; - BinQuasi = derive2 { name="BinQuasi"; version="0.1-5"; sha256="1xjkxf625ggfi5nzj8kvb99xmyvva9qbvl0a3szk0aksqhqlikqi"; depends=[BiocGenerics csaw edgeR GenomicAlignments GenomicRanges IRanges mgcv pracma quadprog RMySQL Rsamtools S4Vectors SummarizedExperiment]; }; + BinQuasi = derive2 { name="BinQuasi"; version="0.1-6"; sha256="0jf7zf3yqr2kgcm6h35234x2dqf65d2dzsh63b4q8m5l36r77k59"; depends=[BiocGenerics csaw edgeR GenomicAlignments GenomicRanges IRanges mgcv pracma quadprog RMySQL Rsamtools S4Vectors SummarizedExperiment]; }; Binarize = derive2 { name="Binarize"; version="1.2"; sha256="014iagr76y3v7ljn6zlbg1hxwbwdi889bqxa7hwmqrcybnla22ja"; depends=[diptest]; }; BinaryEMVS = derive2 { name="BinaryEMVS"; version="0.1"; sha256="1ainp6pg481yqhjc4f1pkxzxczbi3qm0kgq280vndq859ldfkpnh"; depends=[]; }; BinaryEPPM = derive2 { name="BinaryEPPM"; version="2.2"; sha256="0la8mi2wadcxwrq882n4zxvihyqkp8m383c28gl9gm4fs8cqwlxi"; depends=[expm Formula lmtest numDeriv]; }; @@ -388,34 +403,35 @@ in with self; { BioCircos = derive2 { name="BioCircos"; version="0.3.3"; sha256="0l8kd1imb8022n631psm9na0vp502ndn2q7m3mshx9c0mnqsv8n3"; depends=[htmlwidgets jsonlite plyr RColorBrewer]; }; BioFTF = derive2 { name="BioFTF"; version="1.2-0"; sha256="03r6fhpc4dqrcnbl73j9kav1l7rblgfldpbkl2p367vv20xggqih"; depends=[]; }; BioGeoBEARS = derive2 { name="BioGeoBEARS"; version="0.2.1"; sha256="0wyddc5ma47ljpqipfkwsgddp12m9iy4kqwwgklyhf0rqia56b1h"; depends=[ape cladoRcpp FD gdata optimx phylobase plotrix rexpokit xtable]; }; - BioInstaller = derive2 { name="BioInstaller"; version="0.3.3"; sha256="0mr3qyabr4pwz4cjnig5nzbq0hqqd9rmrpnhmgb1gp3c6l013yk1"; depends=[configr devtools futile_logger git2r R_utils RCurl rvest stringi stringr]; }; + BioInstaller = derive2 { name="BioInstaller"; version="0.3.6"; sha256="03fl00f7zwq4v9i09qwnbpnnnky1nf3v91sx52xqiz710gw4awx6"; depends=[configr devtools futile_logger git2r jsonlite liteq R_utils RCurl rvest shiny stringi stringr]; }; BioMark = derive2 { name="BioMark"; version="0.4.5"; sha256="1ifc72bayy3azbilajqqzl0is6z7l1zaadchcg3n8lhmjrv5sk3m"; depends=[glmnet MASS pls st]; }; - BioPET = derive2 { name="BioPET"; version="0.2.1"; sha256="0pwkgffm8hlgvpk3dfzskl50kp9b4rnxc8aj119kwrmlfazhhl50"; depends=[ggplot2 gridExtra pROC VGAM]; }; + BioPET = derive2 { name="BioPET"; version="0.2.2"; sha256="0zgq7i37d0rnjhlkcrl44x62vhz0njsv2fldm64j9r4wc02z1q9n"; depends=[ggplot2 gridExtra pROC VGAM]; }; BioStatR = derive2 { name="BioStatR"; version="2.0.0"; sha256="1k3z337lj8r06xgrqgi5h67hhkz2s5hggj6dhcciq26i1nzafsw6"; depends=[ggplot2]; }; - BiocManager = derive2 { name="BiocManager"; version="1.30.1"; sha256="1d7dqmkg6h02x6agc20prj8nkz061pm7f1gqizibsfz13wv5cx6w"; depends=[]; }; + BiocManager = derive2 { name="BiocManager"; version="1.30.3"; sha256="0mfvx1xzsgiag9p42kdyqg8fvajyakrdy3z2smhdlaawzbi0qmax"; depends=[]; }; Biocomb = derive2 { name="Biocomb"; version="0.4"; sha256="0jqfac81r5731m0i9jq7v5ns9263p8r7i03jyz10y915kfr6ikh6"; depends=[arules class e1071 FSelector gtools MASS nnet pamr pROC randomForest Rcpp rgl ROCR rpart RWeka]; }; Biodem = derive2 { name="Biodem"; version="0.4"; sha256="0k0p4s21089wg3r3pvyy9cxsdf4ijdl598gmxynbzvwpr670qnsh"; depends=[]; }; - BiodiversityR = derive2 { name="BiodiversityR"; version="2.9-2"; sha256="15wa7la36mfr9fi8cahvrkcd5n5gjiar66mj1c1gsaazjwqsfw6n"; depends=[Rcmdr vegan]; }; + BiodiversityR = derive2 { name="BiodiversityR"; version="2.10-1"; sha256="009xrfpnnplr2i7z8kcxp9q924mf7x8j9pqggczynrx5lb3dlrlj"; depends=[Rcmdr vegan]; }; Biograph = derive2 { name="Biograph"; version="2.0.6"; sha256="0vklqwbifbac3v9ws9fs22yxpqqk5b3m96qzr8j0irnimb5kgh5p"; depends=[Epi etm ggplot2 lubridate msm mstate mvna plyr reshape survival]; }; Bioi = derive2 { name="Bioi"; version="0.2.9"; sha256="0kvqvvaws1zc3npxvl3jqidak24n5y8n98ml44mkbh7c5n296z2p"; depends=[assertthat dplyr igraph Rcpp]; }; Biolinv = derive2 { name="Biolinv"; version="0.1-2"; sha256="0g9vw1jcsjawmddkixssm5gbncy17fdd6a3c5b2qd4hx81kxz8q9"; depends=[classInt fields raster sp spatstat]; }; Bios2cor = derive2 { name="Bios2cor"; version="1.2"; sha256="00fzvj20x85gcpb9l6rfnm3qml8nnl365z1a68j90qi14wy6dfh6"; depends=[bigmemory bio3d circular igraph]; }; BisRNA = derive2 { name="BisRNA"; version="0.2.2"; sha256="11jl5109nlm272vncprwplkz4kpvg7yx6yfnbjg47lfrsxcj8n0g"; depends=[MASS]; }; + BivGeo = derive2 { name="BivGeo"; version="1.0.1"; sha256="1vdyjlcgkzpwgzzimpqspnca58xx6spfg7xy49bhmdr0d24iy76z"; depends=[]; }; BivRegBLS = derive2 { name="BivRegBLS"; version="1.0.0"; sha256="1fi399vv54dnfywxbc8yb1r58lrl7zpqkahvcx3f5svjy20dvvbw"; depends=[ellipse]; }; BivUnifBin = derive2 { name="BivUnifBin"; version="1.2"; sha256="0m4a2m7lvlm02hqqigwg3cd6sjzxnxqw1mchxj5g19whk34vwkwi"; depends=[BinOrdNonNor rootSolve]; }; BivarP = derive2 { name="BivarP"; version="1.0"; sha256="08f7sphylaj3kximy1avaf29hxj2n800adsnssh01p9bcxnzb2i4"; depends=[copula dfoptim survival]; }; Bivariate_Pareto = derive2 { name="Bivariate.Pareto"; version="1.0.2"; sha256="1clfknv56zfi9wgzi5bricchvis83mc33i5d4qk3yzf2ryzxag7q"; depends=[compound_Cox]; }; BlakerCI = derive2 { name="BlakerCI"; version="1.0-5"; sha256="16zj678qzwqih92q19dma7a602d0hif2dhii5hvxdgjymg7hg2bj"; depends=[]; }; BlandAltmanLeh = derive2 { name="BlandAltmanLeh"; version="0.3.1"; sha256="11p30zqb3f9ifk3v18dspg18sclz5zxjygy7hw8ccb4bcqhx68lm"; depends=[]; }; - Blaunet = derive2 { name="Blaunet"; version="2.0.7"; sha256="19p2rqbg44pi0dz2iimjgr69zyrjf0dfsic6spph81dyrri1zyvh"; depends=[cairoDevice ergm foreign gWidgets gWidgetsRGtk2 haven network plot3D plot3Drgl rgl RGtk2 sna statnet_common]; }; + Blaunet = derive2 { name="Blaunet"; version="2.0.8"; sha256="127nl041a1rbf8c4ffv8sbkn5y03ywaxkp51yd0sahs2anf415y4"; depends=[cairoDevice ergm foreign gWidgets gWidgetsRGtk2 haven network plot3D plot3Drgl rgl RGtk2 sna statnet_common]; }; Blendstat = derive2 { name="Blendstat"; version="1.0.2"; sha256="04rn5yqkmqrcali75ly476x0dasysbxilynziy48mrm6q3h7xyjy"; depends=[lattice MASS]; }; BlockCov = derive2 { name="BlockCov"; version="0.1.0"; sha256="102slm6qfhsra5fg2qzwi3ldi4xny596g2cq4csiprpkhl9qwyli"; depends=[Matrix]; }; BlockFeST = derive2 { name="BlockFeST"; version="1.6"; sha256="0hj7a5as7nxbgjac7lbj6qfwffx3g8x8phpf9a55f1c9cdzi73a5"; depends=[BASIX]; }; BlockMessage = derive2 { name="BlockMessage"; version="1.0"; sha256="1jrcb9j1ikbpw098gqbcj29yhffa15xav90y6vpginmhbfpwlbf4"; depends=[]; }; Bmix = derive2 { name="Bmix"; version="0.6"; sha256="17swhn2p7jv29fkspacg2v181lkc9yd3xww2fx31xs8hsndcm857"; depends=[mvtnorm]; }; - BoSSA = derive2 { name="BoSSA"; version="3.4"; sha256="0sv42gyv5pzn9w6bn1y361mg6x8z9h1mbgyp8yp5wbv3jl6469s6"; depends=[ape jsonlite phangorn plotrix RSQLite]; }; + BoSSA = derive2 { name="BoSSA"; version="3.5"; sha256="1z7wspp8bk2zyxjbgfyysqbddwmygxsx51320spk50pn5svg5ckh"; depends=[ape jsonlite phangorn plotrix RSQLite]; }; BoardGames = derive2 { name="BoardGames"; version="1.0.0"; sha256="1w3ghs29qlnjrd46lvv055snclwwy6a22fgdqszqm377w4favnhm"; depends=[]; }; - Bolstad = derive2 { name="Bolstad"; version="0.2-38"; sha256="1535cfpn202vb037q027dy51kc4yg5g9mpn4l6x2q1pwrvnnx18f"; depends=[mvtnorm]; }; + Bolstad = derive2 { name="Bolstad"; version="0.2-40"; sha256="1xz2x8gm27aqw1b3psjbpmzkxla8rvkvb974c3imgj71d1x0ykgm"; depends=[mvtnorm]; }; Bolstad2 = derive2 { name="Bolstad2"; version="1.0-28"; sha256="08cfadvl9jl9278ilsf8cm2i2a3i8zsa2f3vjzw2nlv85fwi2c7v"; depends=[]; }; BoltzMM = derive2 { name="BoltzMM"; version="0.1.1"; sha256="0jb81wn8b5lhvlkpv4rs66qdmryf57n2xmxgwl1qk0n8bfzy8ayi"; depends=[BH Rcpp RcppArmadillo]; }; BonEV = derive2 { name="BonEV"; version="1.0"; sha256="0lmgrg53b0abb5hidyjjmwn7lf2ani84k9fil7g6j6mdajjhh1b7"; depends=[qvalue]; }; @@ -425,17 +441,18 @@ in with self; { BoomSpikeSlab = derive2 { name="BoomSpikeSlab"; version="1.0.0"; sha256="07cgzwcnr3z5qnm1fsc75xh9c61gljgd8s633g336dqls4b7nfan"; depends=[BH Boom]; }; BootMRMR = derive2 { name="BootMRMR"; version="0.1"; sha256="07am80603pv1dh5ma3zb0idnslkzm5m3ym8sd1nhkh8zbc6qqmzs"; depends=[]; }; BootPR = derive2 { name="BootPR"; version="0.60"; sha256="03zw7hz4gyhp6iq3sb03pc5k2fhvrpkspzi22zks25s1l7mq51bi"; depends=[]; }; - BootValidation = derive2 { name="BootValidation"; version="0.1.5"; sha256="0whb13gg2zsx8gzwd1f895jai0z2xpfjifdr91kdxmzpsmw78jxj"; depends=[glmnet pbapply pROC risksetROC survival]; }; + BootValidation = derive2 { name="BootValidation"; version="0.1.65"; sha256="1q42yqj56by3j1kmq17pjl4aq0sznhph65yxfwav39q28bf5y83r"; depends=[glmnet pbapply pROC risksetROC survival]; }; BootWPTOS = derive2 { name="BootWPTOS"; version="1.2"; sha256="1860l11xg7444l3x42rq3636csla23gg0mi5in1zibjwn1ddc202"; depends=[fractal wavethresh]; }; - Boruta = derive2 { name="Boruta"; version="5.3.0"; sha256="181ldma4rfd14bnq5prhhsjji1hpr4jmn69b017cs08w7k0nqdi9"; depends=[ranger]; }; + BootstrapQTL = derive2 { name="BootstrapQTL"; version="1.0.2"; sha256="1qf93wmrh6znm81jr3gyn1sl8x4i6pdx811r70fg8k026fbfjn3a"; depends=[data_table foreach MatrixEQTL]; }; + Boruta = derive2 { name="Boruta"; version="6.0.0"; sha256="1pp8zal1vhxlzdhl20phn39m3ffhw5glyqbcgwa0w14zw2mpm6hw"; depends=[ranger]; }; BosonSampling = derive2 { name="BosonSampling"; version="0.1.1"; sha256="0wxn12h903a0mlrkrr3w4qd9ld2a4bifs95i98cnl2dsb76rwf12"; depends=[Rcpp RcppArmadillo]; }; BoutrosLab_plotting_general = derive2 { name="BoutrosLab.plotting.general"; version="5.9.2"; sha256="0cyhqglz0mhfi8yk3a1qdry5ljd8rjzayqj1hyw44w9b8xsm6659"; depends=[cluster e1071 gridExtra gtable hexbin lattice latticeExtra MASS]; }; BradleyTerry2 = derive2 { name="BradleyTerry2"; version="1.0-8"; sha256="09c6zdzf5k5x7zv5m6ygl4k5xbprlpb6s3lrq432mmv8rn2yi58z"; depends=[brglm gtools lme4 qvcalc]; }; BradleyTerryScalable = derive2 { name="BradleyTerryScalable"; version="0.1.0"; sha256="0g12fkfs2sykyd6fzf924zv8gj2js452c4pf0pz2p6156chwrk8c"; depends=[dplyr igraph Matrix purrr Rcpp RcppArmadillo]; }; - BrailleR = derive2 { name="BrailleR"; version="0.28.0"; sha256="0hg3858aa9zr68rd7xdc1kjapdfp5lgy8rx07qd3brljnhjaxxsz"; depends=[devtools extrafont ggplot2 gridGraphics gridSVG hunspell knitr magrittr moments nortest reticulate rmarkdown whisker XML xtable]; }; + BrailleR = derive2 { name="BrailleR"; version="0.29.1"; sha256="0n6njampfav84yd68vi4nw8h3dm285m3wfqi048ghiw740sa4rjk"; depends=[devtools dplyr extrafont ggplot2 gridGraphics gridSVG hunspell knitr magrittr moments nortest reticulate rmarkdown roloc rolocISCCNBS whisker XML xtable]; }; Branching = derive2 { name="Branching"; version="0.9.4"; sha256="1c209gdasm7qipv2gg4d1hr0jmhnzz5rddgjxb7xacazc0c2mhff"; depends=[]; }; - BreedingSchemeLanguage = derive2 { name="BreedingSchemeLanguage"; version="0.9.5"; sha256="0hw9a3d2wqngvw17bgiwl7l9pn0f7pn8v3da6zz4gpf986pk8blq"; depends=[ggplot2 lme4 Matrix Rcpp rrBLUP snowfall]; }; - Brobdingnag = derive2 { name="Brobdingnag"; version="1.2-5"; sha256="1ly9fx6mmiwrni52li0c23amsh4k36zjv9h5432igf0fgldhr3pq"; depends=[]; }; + BreedingSchemeLanguage = derive2 { name="BreedingSchemeLanguage"; version="0.9.6"; sha256="0lj8s42ndqqllnm8v978481zqmc751v31909rir1pkwcsm3irisx"; depends=[ggplot2 lme4 Matrix Rcpp rrBLUP snowfall]; }; + Brobdingnag = derive2 { name="Brobdingnag"; version="1.2-6"; sha256="1m3ajvcksqfck5l5hj5xiflj4ry6d896ybv4f0xxks8chgnwmv0r"; depends=[]; }; BrownDog = derive2 { name="BrownDog"; version="0.2.1"; sha256="0wnf1jcf4cakbvj9j1l7jk9mq7gd4j1il1ha2vglghqn04f27938"; depends=[httpuv jsonlite RCurl]; }; Brq = derive2 { name="Brq"; version="2.1"; sha256="0my9sb0761nq1ivx31k7nwpg8xidqvd0zv3lan57hnsmn7d1i7a9"; depends=[]; }; Brundle = derive2 { name="Brundle"; version="1.0.8"; sha256="1yj196x6xb75qgi16pgg3dyjmxmjklfjcpxymaki32drhmylf24z"; depends=[DESeq2 DiffBind lattice Rsamtools]; }; @@ -444,32 +461,34 @@ in with self; { BurStFin = derive2 { name="BurStFin"; version="1.02"; sha256="16w2s0bg73swdps9r0i8lwvf1najiqyx7w7f91xrsfhmnqkkjzka"; depends=[]; }; BurStMisc = derive2 { name="BurStMisc"; version="1.1"; sha256="0cyi42zkn2dby162x9f95b3hpqxbzx25s7nahb4p86r60xj3a5c0"; depends=[]; }; BusinessDuration = derive2 { name="BusinessDuration"; version="0.2.0"; sha256="17923n1r3n8kp7qqzr2dv8ffax355yyc3b9f6mv2hxy6k31hrrb8"; depends=[chron]; }; - BuyseTest = derive2 { name="BuyseTest"; version="1.3.2"; sha256="1wdc2w8pdjnsj2hn902zrn6d734d9y4l4cfxd4hq1m1n7ly6gnnk"; depends=[data_table doParallel foreach lava prodlim Rcpp RcppArmadillo]; }; + BuyseTest = derive2 { name="BuyseTest"; version="1.6"; sha256="1p5v86xbcl88jmdpxzmwj5wmx6a6h8akzddb2lx03wcn759icx7v"; depends=[data_table doParallel foreach lava prodlim Rcpp RcppArmadillo]; }; C443 = derive2 { name="C443"; version="1.0.0"; sha256="0d04769m9kkjqpj1cgfhqrri893nwi6qn7fz63z5pkym5cig5yyi"; depends=[cluster ggplot2 gridExtra igraph MASS partykit qgraph RColorBrewer reshape2 rpart]; }; C50 = derive2 { name="C50"; version="0.1.2"; sha256="1fpspmsm62h077dkdhii23bs3sxlblabfqj4waz794ihw1b9hicg"; depends=[Cubist partykit]; }; + CA3variants = derive2 { name="CA3variants"; version="1.0"; sha256="006r3a8jhkbgdfpycbdv3q1pfx9pkf102cgi285awgdhs6fhh88s"; depends=[ggplot2 ggrepel gridExtra]; }; CADFtest = derive2 { name="CADFtest"; version="0.3-3"; sha256="06bwv728ckalzibxginzfica24w18m4g87i0i064m3q89ghmnlqm"; depends=[dynlm sandwich tseries urca]; }; CADStat = derive2 { name="CADStat"; version="3.0.8"; sha256="0wdglw1vyd5gz70r9ma0mwshvizv39nb4ahp8pvr70c4qqzsfhc0"; depends=[bio_infer car gdata gmodels JavaGD JGR lattice MASS quantreg rJava rpart XML]; }; - CAISEr = derive2 { name="CAISEr"; version="0.3.0"; sha256="00jj01hyk86f90b8krl3k8pfh98blhq6vmvnizwwhrmkzy7d7bbj"; depends=[assertthat pbmcapply]; }; + CAISEr = derive2 { name="CAISEr"; version="0.3.3"; sha256="1jbmc2ajmvqs7i1qxx1drx6nqqwl29hxk02qmyf8iamg7ip4adqi"; depends=[assertthat pbmcapply]; }; CALF = derive2 { name="CALF"; version="0.2.0"; sha256="12w1vr0rk6m4lv6zvqrf45k81d301ln1253wyy9xi6mv1hkabg0v"; depends=[ggplot2]; }; CALIBERrfimpute = derive2 { name="CALIBERrfimpute"; version="1.0-1"; sha256="1xsnqyj0qdi081rdnpas9ciy9zbhdcjx3lphl6drk0bbmik3znkv"; depends=[mice mvtnorm randomForest]; }; CAM = derive2 { name="CAM"; version="1.0"; sha256="07mmrz6j8cm6zgaw2zcxgkxb7abd651kb80526r271snjgvpr5bl"; depends=[glmnet Matrix mboost mgcv]; }; CAMAN = derive2 { name="CAMAN"; version="0.74"; sha256="0d932fbqzlxlhn7m8zfx7wr02pc7fm8398rym1jh2cdy2fk5im08"; depends=[mvtnorm sp]; }; - CANSIM2R = derive2 { name="CANSIM2R"; version="1.12.0"; sha256="12wnbgrcx9373n5n5wm6scsw8aq1jfrjzfh2f38asn7sxm3ky6ri"; depends=[downloader Hmisc reshape2]; }; - CARBayes = derive2 { name="CARBayes"; version="5.0"; sha256="0kii28mf75m7ij1l0bz2w93h7m1wwq1xjvv3d3nf3ps9h8rxzi8d"; depends=[CARBayesdata coda MASS matrixcalc MCMCpack Rcpp sp spam spdep truncnorm]; }; - CARBayesST = derive2 { name="CARBayesST"; version="2.5.2"; sha256="0jww40ghcfiq7laprdicynn1m34ykz9l9navi9rdx8p8d7k76ykc"; depends=[CARBayesdata coda dplyr MASS matrixcalc Rcpp sp spam spdep testthat truncdist truncnorm]; }; - CARBayesdata = derive2 { name="CARBayesdata"; version="2.0"; sha256="0mlqlqm50k4lqyvbjva7vji9jqa3rwi5ky5521rp5l4nqlj53sfb"; depends=[shapefiles sp]; }; + CANSIM2R = derive2 { name="CANSIM2R"; version="1.14.1"; sha256="1dnzbd9lyqj3w80lx12qxcsbmv8wy6hxknyi5ijp99cfv7kaq1kc"; depends=[downloader Hmisc reshape2]; }; + CARBayes = derive2 { name="CARBayes"; version="5.1"; sha256="1jq5skrpsmj9glypy1l04wjc9bvs91wjcwmrilhrhh8mkvysravh"; depends=[CARBayesdata coda leaflet MASS matrixcalc MCMCpack Rcpp rgdal sp spam spdep truncnorm]; }; + CARBayesST = derive2 { name="CARBayesST"; version="3.0"; sha256="1izz6lq56wlhwv7sbznckwrs7xpj2iz59g373ycbyjgwksx2k913"; depends=[CARBayesdata coda dplyr gtools leaflet MASS matrixcalc matrixStats Rcpp rgdal sp spam spdep testthat truncdist truncnorm]; }; + CARBayesdata = derive2 { name="CARBayesdata"; version="2.1"; sha256="09rjxdrbpnqm6gv9g1jxh91jmww345wi9vlhb4s1n6b3xnh44fhs"; depends=[shapefiles sp]; }; CARE1 = derive2 { name="CARE1"; version="1.1.0"; sha256="1zwl4zv60mrzlzfgd7n37jjlr0j918a8ji36n94s5xw8wwipiznw"; depends=[]; }; CARLIT = derive2 { name="CARLIT"; version="1.0"; sha256="04kpjfps4ydf8fj75isqp16g1asdsyf8nszhbfkpw1zxkrmiksyp"; depends=[]; }; CARRoT = derive2 { name="CARRoT"; version="1.0.0"; sha256="1xcvyk9id3scr629n7f3b1hxzfk5947n22s1hwdwi4njf3p7s67f"; depends=[doParallel foreach nnet Rdpack]; }; CARS = derive2 { name="CARS"; version="0.2"; sha256="1n8p4n9fbl20jps9g9pbspw54hq9y6kqbggc8h0i9pbm1b25ngrg"; depends=[np]; }; CARrampsOcl = derive2 { name="CARrampsOcl"; version="0.1.4"; sha256="1sdrir7h7xl1imipm9b71vca062dxqsqd8mg3w9f3s80x2aghxl8"; depends=[fields OpenCL]; }; - CASMAP = derive2 { name="CASMAP"; version="0.5.9"; sha256="1rhvc44ngcvwlp12iawry5i4fmdkb1waldb0x3diw3jssim3n6mq"; depends=[Rcpp]; }; - CAST = derive2 { name="CAST"; version="0.2.0"; sha256="01n4sdk6gsjz2g157h4y04rwkjxwzzsia3pqs0slnmvmf4yzr0b4"; depends=[caret ggplot2]; }; + CASMAP = derive2 { name="CASMAP"; version="0.6.0"; sha256="1z321l34da5ggwmbggs9d8m96syra1jm29gj68lfhd7ikbpmw96w"; depends=[Rcpp]; }; + CAST = derive2 { name="CAST"; version="0.3.0"; sha256="082xc2ic0kpp0rqyc3kh6mds2yv2n39szlmn1hf76bfnnkz1na8v"; depends=[caret ggplot2]; }; CATT = derive2 { name="CATT"; version="2.0"; sha256="12xdspl1gbf51snyrl44nn7alfyccdfihibkgvzr66lrby8b8fhg"; depends=[]; }; CATTexact = derive2 { name="CATTexact"; version="0.1.0"; sha256="0mklkmay9ph4d0z2l1gcg0lj429xkyhmz7srdil5rgwqxx9dnqs8"; depends=[]; }; - CATkit = derive2 { name="CATkit"; version="3.3.2"; sha256="1yyz3dc9r2dn16q745374dpwgf56880kv0yg35h6dhmrya3xrprm"; depends=[assertr CombMSC Hmisc magic MASS png rtf season signal]; }; - CAvariants = derive2 { name="CAvariants"; version="3.4"; sha256="1mrqvcgnxbzah7vhqqqdygds8plwswd2l8w0aq5132byhhc4kiax"; depends=[]; }; - CBCgrps = derive2 { name="CBCgrps"; version="2.1"; sha256="0cvgcpvdvpvjkzkwapx0y4a666xq54dwm00w4w9n8fhgp05mnkn8"; depends=[nortest]; }; + CATkit = derive2 { name="CATkit"; version="3.3.3"; sha256="01q2ssyg0jcjgahaslfgpakjsv2wil654lc6xrg5xbbrkx7ccb90"; depends=[assertr CombMSC Hmisc magic MASS png rtf season signal]; }; + CAinterprTools = derive2 { name="CAinterprTools"; version="1.0.0"; sha256="1ia4qfvj0nzxi6pwqnha2vpfcx3qwaw4vrjqiza11sai274j0pjy"; depends=[ca classInt cluster FactoMineR ggplot2 ggrepel Hmisc RcmdrMisc reshape2]; }; + CAvariants = derive2 { name="CAvariants"; version="3.5"; sha256="14amvfm4l219zaqi3492433j3gbhrs6dbg7smgkyp7aklnidfw5g"; depends=[ggplot2 ggrepel gridExtra rgl]; }; + CBCgrps = derive2 { name="CBCgrps"; version="2.3"; sha256="07cy8z1fyr328jpa98sdxwd1vydx8sr93jx79hjn9hgm157240mg"; depends=[nortest]; }; CBDA = derive2 { name="CBDA"; version="1.0.0"; sha256="0qm77vvqjgi83i8izly995ziv9ski8kgzqyq4g81i2k7a5dp8vxv"; depends=[doParallel foreach prettydoc SuperLearner]; }; CBPS = derive2 { name="CBPS"; version="0.19"; sha256="0rb04x8lin5p6h0ziiv2zh98qvah5mkpd3qbgrmhczacavvpb8hl"; depends=[glmnet MASS MatchIt nnet numDeriv]; }; CBT = derive2 { name="CBT"; version="1.0"; sha256="13h6sf7w03nfq2arqymwww13ywnv9xnqbqazlzn856mj3ggaqda7"; depends=[]; }; @@ -480,15 +499,15 @@ in with self; { CCP = derive2 { name="CCP"; version="1.1"; sha256="07jxh33pb8llk1gx4rc80ppi35z8y1gwsf19zrca9w91aahcs8cx"; depends=[]; }; CCTpack = derive2 { name="CCTpack"; version="1.5.2"; sha256="1kkxsk9x4jz2bvldmba7fsri3zc1cjz15z0xicjmfc7lj72ngdig"; depends=[MASS mvtnorm polycor psych R2jags rjags]; }; CCpop = derive2 { name="CCpop"; version="1.0"; sha256="10kgw3b98r0kn74w89znq6skgk8b3ldil6yb0hn5rlcf6lazjzca"; depends=[nloptr]; }; - CDECRetrieve = derive2 { name="CDECRetrieve"; version="0.1.1"; sha256="0rxwsyr2j35f52vzpg5v4jn5qi72xn1gbqxnpsfn8c6hhmqdfjwz"; depends=[dplyr glue httr lazyeval lubridate magrittr purrr readr roxygen2 rvest stringr tibble tidyr xml2]; }; + CDECRetrieve = derive2 { name="CDECRetrieve"; version="0.1.2"; sha256="1p8d9rwkcd2bxma9h3ccg2k4795v3ycihwh9hblymfis8ncfhr19"; depends=[dplyr glue httr lazyeval lubridate magrittr purrr readr roxygen2 rvest stringr tibble tidyr xml2]; }; CDFt = derive2 { name="CDFt"; version="1.0.1"; sha256="0sc8ga48l3vvqfjq3ak5j1y27hgr5dw61wp0w5jpwzjz22jzqbap"; depends=[]; }; CDLasso = derive2 { name="CDLasso"; version="1.1"; sha256="0n699y18ia2yqpk78mszgggy7jz5dybwsi2y56kdyblddcmz1yv7"; depends=[]; }; - CDM = derive2 { name="CDM"; version="6.3-45"; sha256="159ahd17ddv0y78xrfrm1zdq5wfwav4jc26b41wd23zli1ljnlj5"; depends=[MASS mvtnorm polycor Rcpp RcppArmadillo sfsmisc]; }; + CDM = derive2 { name="CDM"; version="6.6-5"; sha256="1gdmhpisy93672qyrbr0m2j3g5jivr3jik9405633pzq24ac8wvi"; depends=[MASS mvtnorm polycor Rcpp RcppArmadillo sfsmisc]; }; CDNmoney = derive2 { name="CDNmoney"; version="2012.4-2"; sha256="1isbvfq0lygs75y1hn3klqms8q7g1xbkcr8fgj75h1c99d4khvm6"; depends=[]; }; CDROM = derive2 { name="CDROM"; version="1.1"; sha256="0mvhqs4m8jp39x1rk31a1sqqmfq1avcnasgh8bizlyxx62igmi1b"; depends=[]; }; CDVine = derive2 { name="CDVine"; version="1.4"; sha256="0cp78pb6yny4n5q2j9k6xdql588536572gbphnw8zkdmrg65qyz7"; depends=[igraph MASS mvtnorm]; }; CDVineCopulaConditional = derive2 { name="CDVineCopulaConditional"; version="0.1.1"; sha256="1wyy324vrwipdsq0p021bj1gdhyxg09g3dkw8wv5v6rfrrs84m9k"; depends=[combinat VineCopula]; }; - CEC = derive2 { name="CEC"; version="0.9.4"; sha256="194n190szwzxjxfdhiah1f50vp6n7f3q567yky7pq1x2hngna5rs"; depends=[]; }; + CEC = derive2 { name="CEC"; version="0.10.2"; sha256="03fxhqlpn7x3djfanlix3yzf1cy6zf854g70gq2d93ix9gis7knv"; depends=[]; }; CEGO = derive2 { name="CEGO"; version="2.2.0"; sha256="0k01fb8bciq3m2rcqcicrlhx6av46sdczgcyn8df1f3pr28l1fyf"; depends=[DEoptim fastmatch MASS Matrix ParamHelpers quadprog]; }; CENFA = derive2 { name="CENFA"; version="0.1.0"; sha256="1bxrqvi67s93mvkbigb8l7rrn2j2ix7qw7vcxf4dbwd7xf3qqv6q"; depends=[doSNOW foreach magrittr pbapply raster Rcpp snow sp]; }; CEoptim = derive2 { name="CEoptim"; version="1.2"; sha256="0bbjrhl63cbx1rsr5gclbqhjpnjid8ynk2ygaf1chf8z381n7650"; depends=[MASS msm sna]; }; @@ -500,15 +519,16 @@ in with self; { CHMM = derive2 { name="CHMM"; version="0.1.1"; sha256="07fdvnwhblwvljbl2z0vs42nwki67yl5ly3fj40p50k3rnqqmavj"; depends=[mclust]; }; CHNOSZ = derive2 { name="CHNOSZ"; version="1.1.3"; sha256="07j1xvv6rn57hirxw1dajnvk9hmj3r9bgk4fckzmmpclf22z4mwq"; depends=[]; }; CHsharp = derive2 { name="CHsharp"; version="0.4"; sha256="19mb5zzi9x4pm2z9jbha5dz4k5f1iqjv31aisyv4qh14k5ysdz2i"; depends=[KernSmooth scatterplot3d]; }; - CIAAWconsensus = derive2 { name="CIAAWconsensus"; version="1.2"; sha256="0s3a9ay0l9n5kc6q0wb7f9625vba4giz1pdg3ikq4h4zhp1ldq62"; depends=[Matrix mvtnorm numDeriv stringr]; }; + CIAAWconsensus = derive2 { name="CIAAWconsensus"; version="1.3"; sha256="0yhay4fp5lyf0sdcf807yvys17qz9cr5f5ikim25mq336p7fp03x"; depends=[Matrix mvtnorm numDeriv stringr]; }; CIEE = derive2 { name="CIEE"; version="0.1.1"; sha256="03kq9cp0v41y0r2l9j5imcrsail2xsvlzhhhsrw454d4s9gqdql9"; depends=[survival]; }; CIFsmry = derive2 { name="CIFsmry"; version="1.0.1.1"; sha256="1m2m2zvg9ghy3bm2sll7jp4xm2vw58kc5xaxd2c9k82771m3a4j0"; depends=[]; }; CINID = derive2 { name="CINID"; version="1.2"; sha256="0pkgzi2j0045p10kjvnq8f4j1agzrqfw0czvvfrzj9yjfpj8xc99"; depends=[]; }; - CINNA = derive2 { name="CINNA"; version="1.1.41"; sha256="1s0hcqikb02xnz6kw4aapl5dw6p1dksjnr3yhhnfw6wibbkls1hc"; depends=[centiserve circlize corrplot dendextend factoextra FactoMineR GGally ggplot2 igraph network pheatmap plyr qdapTools Rtsne sna viridis]; }; + CINNA = derive2 { name="CINNA"; version="1.1.50"; sha256="19xh2n73b0qbnj9pihbwxkvaq96d459mj4wrkcnzbh93dj6841an"; depends=[centiserve circlize corrplot dendextend factoextra FactoMineR GGally ggplot2 igraph intergraph network pheatmap plyr qdapTools Rtsne sna viridis]; }; CISE = derive2 { name="CISE"; version="0.1.0"; sha256="10mbi4v8dfdc9ngnrrmxpng8fnig5m8nv7799jksbcf6pnj8yv51"; depends=[far gdata glmnet MASS Matrix rARPACK]; }; CITAN = derive2 { name="CITAN"; version="2015.12-2"; sha256="08h91q7529q04izgqw3ahm4r0zjpwnwyc0vynykvv9fz2fkbk7wb"; depends=[agop DBI hash RGtk2 RSQLite stringi]; }; CIplot = derive2 { name="CIplot"; version="1.0"; sha256="0hx3dn7d8hvsh75747d9046iqriy3bjnchph8xllnvlhkrm4di1f"; depends=[MASS multcomp]; }; CJAMP = derive2 { name="CJAMP"; version="0.1.0"; sha256="0kvmb8vh3dfhdavmvkfmr8293p5lgjws6p7kzmc7r9h6bzmc2hcr"; depends=[optimx]; }; + CKLRT = derive2 { name="CKLRT"; version="0.2.3"; sha256="1d8sg3ncns3fpjaghz1h1z9nfrl31v09xijrzzsias8xjrpi191b"; depends=[MASS mgcv nlme Rcpp RcppEigen]; }; CLA = derive2 { name="CLA"; version="0.90-1"; sha256="1rpklm21i9rjw0vfhaz9brq9571yjynwfhpv6dp6fbl3cj7bwb8g"; depends=[]; }; CLME = derive2 { name="CLME"; version="2.0-10"; sha256="1jlib4pi3ifhfwmvd1jj4kkl6npirykhz0wlvv19nvhf3514y04s"; depends=[isotone lme4 MASS nlme openxlsx prettyR shiny stringr]; }; CLSOCP = derive2 { name="CLSOCP"; version="1.0"; sha256="0rkwq9rl2ph4h5zwb2i3yphjyzxmh6b6k23a8gcczycx6xdq4yhw"; depends=[Matrix]; }; @@ -516,29 +536,31 @@ in with self; { CMF = derive2 { name="CMF"; version="1.0"; sha256="0hvqcbmg2vd0i1rjb1m1bkrbv2vkj1siank1v8w0n5b6881cyz7q"; depends=[Rcpp]; }; CMLS = derive2 { name="CMLS"; version="1.0-0"; sha256="1542qqsl6sksrcpwhnn55d260hkbmy4ikd0v2an96yxk5w95spvn"; depends=[quadprog]; }; CMPControl = derive2 { name="CMPControl"; version="1.0"; sha256="0cp29cibiydawsl0cq433l9abdivr16b431zlrh45wzr5kzfcs0v"; depends=[compoisson]; }; - CMatching = derive2 { name="CMatching"; version="2.1"; sha256="172b5pzs6z8rdziqn1cq0s4zcr5hd2ql3wjslf6rv7zn9afkmjdr"; depends=[lme4 lmtest Matching multiwayvcov]; }; + CMatching = derive2 { name="CMatching"; version="2.2.1"; sha256="0q59k84vjvn8q75skrv31jqpjf6zqghkdk1saiwn6ys8rja03m4l"; depends=[lme4 lmtest Matching multiwayvcov]; }; CMplot = derive2 { name="CMplot"; version="3.3.1"; sha256="01qpy7bb3503i3b8v4psrxbx9ff5vzcv54j55mdr1bphwmnp1kzq"; depends=[]; }; - CNLTreg = derive2 { name="CNLTreg"; version="0.1"; sha256="1fjc45kv2nm902vpfynfxj0n7nm2prazm44nhg2m30vd6l1ijisv"; depends=[adlift miscTools nlt]; }; - CNLTtsa = derive2 { name="CNLTtsa"; version="0.1"; sha256="0s98ckg6ms3kh49b8la2d8rsdb0m4m0v8gdbj48nqxncdvg25qk4"; depends=[adlift CNLTreg fields nlt]; }; + CNLTreg = derive2 { name="CNLTreg"; version="0.1-2"; sha256="07yi0ajil1113663v3gp5d3453r4l9qm442jnpydx4ygvjk7m2ha"; depends=[adlift miscTools nlt]; }; + CNLTtsa = derive2 { name="CNLTtsa"; version="0.1-2"; sha256="1vy0jjg6s8yvsvkx4pin183y5bnikm5cmjcpa9znz9dj1w6hwr5r"; depends=[adlift CNLTreg fields nlt]; }; CNOGpro = derive2 { name="CNOGpro"; version="1.1"; sha256="1frsmhfqrlg1vsa06cabqmrzngq4p5gqwyb9qgnsgg81a9ybm6l8"; depends=[seqinr]; }; + CNVScope = derive2 { name="CNVScope"; version="1.9.7"; sha256="1xj82nwkv27wfwrks9rckdgmhlqfl4n0zmcqqa3f9ryx79jm7zbl"; depends=[BiocManager biomaRt blockseg BSgenome_Hsapiens_UCSC_hg19 circlize ComplexHeatmap data_table doParallel dplyr DT foreach GenomicFeatures GenomicInteractions GenomicRanges ggplot2 heatmaply HiCseg htmltools htmlwidgets igraph InteractionSet IRanges jointseg logging magrittr Matrix matrixStats numbers OpenImageR plotly plyr RCurl readr reshape2 rslurm rtracklayer S4Vectors shiny shinycssloaders shinyjs shinythemes spatialfil tidyr visNetwork]; }; CNVassocData = derive2 { name="CNVassocData"; version="1.0"; sha256="17r3b1w9i9v6llawnjnrjns6jkd82m2cn9c90aif8j0bf4dmgdli"; depends=[]; }; CNprep = derive2 { name="CNprep"; version="2.0"; sha256="08dpjikx3ldqzw2kwb12q0kbw15qzl09srjdfs0sz9si0x6bfxs6"; depends=[mclust rlecuyer]; }; CNull = derive2 { name="CNull"; version="1.0"; sha256="14hy86zg18hqxi63bfzrpkz70yrzfxp2v2pva5xnrvx9dmlyz820"; depends=[ape Matrix PhyloMeasures Rcpp]; }; COBRA = derive2 { name="COBRA"; version="0.99.4"; sha256="1r1cw12d7c148pcgcg08bfsr1q1s736kfpyyss6b4d7ny7wgmqy4"; depends=[]; }; COCONUT = derive2 { name="COCONUT"; version="1.0.2"; sha256="1qjrhxn6dkxyimdca3nslaiw3hncfpk1pk4v01mcrnz550z001nz"; depends=[]; }; COMBAT = derive2 { name="COMBAT"; version="0.0.4"; sha256="0m700pl33frdpc9y16y4zyh1ixpardh0r5kmz8a78jrh1acn30id"; depends=[corpcor mvtnorm]; }; + COMBIA = derive2 { name="COMBIA"; version="1.0.6"; sha256="1640bfl5sn00czxnl6j2rrdrzc5arvfpy5b66viybxm2qqbiw49w"; depends=[gdata hash lattice latticeExtra oro_nifti]; }; COMPoissonReg = derive2 { name="COMPoissonReg"; version="0.4.1"; sha256="14gjrf2hj7dy4hd0qnh6vqjzh7gc6g7gm7rh1d8dingkjwmjzrqb"; depends=[]; }; CONDOP = derive2 { name="CONDOP"; version="1.0"; sha256="0si9nm93wk9lif3r6jh2nxr4sjq1iqyfavbykja3zcy6yn05i19s"; depends=[earth GenomeInfoDb GenomicRanges IRanges mclust plyr randomForest rminer S4Vectors seqinr]; }; CONS = derive2 { name="CONS"; version="0.1.1"; sha256="0w0rca4z3hij0lbabpdnhv2lb52gx574g7bqp6q16772pi4685hf"; depends=[FactoMineR gridExtra gWidgets pander raster readxl REdaS]; }; CORE = derive2 { name="CORE"; version="3.0"; sha256="0wq9i7nscnzqiqz6zh6hglm7924261bw169q3x6l9i6jgqhvn32d"; depends=[]; }; - CORElearn = derive2 { name="CORElearn"; version="1.52.1"; sha256="0i37dpnphdq9pcb94rzpy80gw88zrfy8diiig94p1gdj0dk57b0f"; depends=[cluster nnet rpart]; }; + CORElearn = derive2 { name="CORElearn"; version="1.53.1"; sha256="01jjw32awqjlvrn2wanljr3v4nphjb8mknzmz4skyhx0zgdm369x"; depends=[cluster nnet rpart]; }; CORM = derive2 { name="CORM"; version="1.0.2"; sha256="0g5plafx2h1ija8jd6rxvy8qsrqprfbwbi1kq1p4jdr9miha20nv"; depends=[cluster limma]; }; COSINE = derive2 { name="COSINE"; version="2.1"; sha256="10ypj849pmvhx117ph3k1jqa62nc4sdmv8665yahds7mh0ymhpjj"; depends=[genalg MASS]; }; COUNT = derive2 { name="COUNT"; version="1.3.4"; sha256="02f7779fy0d2bql88x5v9csbxljhnyvl8wb8h83xrmwl7kaxsdpy"; depends=[MASS msme sandwich]; }; COUSCOus = derive2 { name="COUSCOus"; version="1.0.0"; sha256="1ykqi72v8v1b3g9qy6h34dvk5fynzf1rl2mby65p08axmaba5798"; depends=[bio3d matrixcalc]; }; CP = derive2 { name="CP"; version="1.6"; sha256="18zblf13riiz3mq3hkvg6vhiwjzpsn6mvgc2p0bqyldy98v4aisd"; depends=[survival]; }; CPBayes = derive2 { name="CPBayes"; version="0.3.0"; sha256="1vzh9sgij194j7kiwjgba7xsqffiif9zamj9gdv2lk91wdcqaxid"; depends=[forestplot MASS]; }; - CPE = derive2 { name="CPE"; version="1.4.4"; sha256="09sqp2a0j43jr9ya9piv8575rwd5fdvwmiz4chv75r3mw8p128mn"; depends=[rms survival]; }; + CPE = derive2 { name="CPE"; version="1.5.1"; sha256="0n3pd6daj0mzhh547syh7nz8iys6q27igqngldb8zd4ib4778603"; depends=[rms survival]; }; CPMCGLM = derive2 { name="CPMCGLM"; version="1.2"; sha256="07hx2ik5zg05w1h6i94398mp54q958phws9ydgp6syjqlp9dpf1p"; depends=[abind mvtnorm plyr]; }; CPP = derive2 { name="CPP"; version="0.1.0"; sha256="1kdf43pnavjbmxkvrj78fiwl0ykln9x9ck8pcivhj9q5rsfbhbh4"; depends=[ineq kappalab mc2d]; }; CPsurv = derive2 { name="CPsurv"; version="1.0.0"; sha256="1r68pp3jbcbwgfac132h30qx6ah780aychr49rlncn17xbdalxsh"; depends=[muhaz survival]; }; @@ -547,18 +569,19 @@ in with self; { CRANsearcher = derive2 { name="CRANsearcher"; version="1.0.0"; sha256="09gw1s28gb0l2cn4w3asl6zlr7wfacxwafbdrayajwckyfkjl5dl"; depends=[curl dplyr DT lubridate miniUI shiny shinyjs stringr]; }; CREAM = derive2 { name="CREAM"; version="1.1.1"; sha256="1lccpwn6c5pmykgf689gvvpqdcilkys4vclpxjhllhanjrfhcs3q"; depends=[]; }; CRF = derive2 { name="CRF"; version="0.3-16"; sha256="1vw8gkrhymqi7x3p257k8vvn4df4s16w8hhm1myzhcp6bf44jqg4"; depends=[Matrix]; }; - CRM = derive2 { name="CRM"; version="1.1.1"; sha256="09h6xvqc2h2gxhdhc7592z93cnw16l549pn9i26ml0f0n20hljmf"; depends=[]; }; + CRM = derive2 { name="CRM"; version="1.2.4"; sha256="0jv2z1y3zyj1m86p4pmqww58hj8pvid1ss6ym67y46n9srzxsmj5"; depends=[]; }; CRPClustering = derive2 { name="CRPClustering"; version="1.2"; sha256="19m7jg6ck2gqmry2p35h3vv8msm4w1x7qwwmm746r646q7w9ylml"; depends=[dplyr lucid MASS mvtnorm png randomcoloR]; }; CRTSize = derive2 { name="CRTSize"; version="1.0"; sha256="1d45zx26bf0zk0piham69gvb8djqf48g6iisbldv0ds3s2hhcsin"; depends=[]; }; CRTgeeDR = derive2 { name="CRTgeeDR"; version="2.0"; sha256="1fzw8618k152b8d4d6wmzp0bfkz2grwp0rqsplwvfdx23nxq437n"; depends=[ggplot2 MASS Matrix]; }; - CSESA = derive2 { name="CSESA"; version="1.0.4"; sha256="05nijz8x5sgmc4aykxsqg2i1n50zx0kd5lqi5a1fwxbx2miw27sv"; depends=[Biostrings]; }; - CSFA = derive2 { name="CSFA"; version="1.1.0"; sha256="0dqva3i4jhlbjmqwngxqgl6prfs3cxb219jqc7yvjjk8n4nz8jim"; depends=[elasticnet fabia FactoMineR pls randomcoloR snowFT]; }; + CSESA = derive2 { name="CSESA"; version="1.1.1"; sha256="1q3rdfw90kjk3incn8wzf57032f63z0p0zcdndw30s2fhv2si7bn"; depends=[Biostrings]; }; + CSFA = derive2 { name="CSFA"; version="1.2.0"; sha256="1nkyhk8qhrrlx8v26yw86l954m4xfcxma4pqbhgw95jvqql5h3li"; depends=[elasticnet fabia FactoMineR pls randomcoloR snowFT]; }; CSclone = derive2 { name="CSclone"; version="1.0"; sha256="0lqsqsgh2sf44fr1r7g179556v294yr1wy7x4320g7adxshrwyh5"; depends=[DNAcopy lpSolve mcclust moments]; }; - CSeqpat = derive2 { name="CSeqpat"; version="0.1.1"; sha256="1vgwkiin485n3bks09bg4ricjfw1l8k5qfv7l0xp50zha3r18g1y"; depends=[NLP tm]; }; + CSeqpat = derive2 { name="CSeqpat"; version="0.1.2"; sha256="1nqk873cagpn4fba4rmyzb6hni1p5lqcvsr9givrcm0gfx756w1h"; depends=[NLP tm]; }; CTM = derive2 { name="CTM"; version="0.2"; sha256="0h1lpygjq46nwkn4km49bngvxmgrnh3csrfln3yjr9yyzs7d3lz1"; depends=[jiebaR plyr]; }; CTRE = derive2 { name="CTRE"; version="0.1.0"; sha256="1v2327g78rva3n7lvn66rznzzf2qbdak0jp8gakgljpl30kpkv5v"; depends=[assertthat MittagLeffleR plyr tea zoo]; }; - CTT = derive2 { name="CTT"; version="2.3.2"; sha256="1f4ba2qnxx5vlj64sxz4ynby9hv7f32v6ls8yn887z51m33xdxi8"; depends=[]; }; + CTT = derive2 { name="CTT"; version="2.3.3"; sha256="02z354gf7rzh9xzyflmsag4hgmqgv3sr9s9ja903rwdz1pjqrlff"; depends=[]; }; CTTShiny = derive2 { name="CTTShiny"; version="0.1"; sha256="1c9vsiqyig6kfjpy3dfrysc466h4v9530m49aynz65i1njplswyh"; depends=[CTT ltm psych shiny shinyAce]; }; + CTTinShiny = derive2 { name="CTTinShiny"; version="0.1.0"; sha256="1dc6kaxajkvviszmrcvhh9cg2k8g1hbpf1f6fg3wlgnb80fsx9b7"; depends=[CTT foreign shiny]; }; CUB = derive2 { name="CUB"; version="1.1.2"; sha256="031jkzh6cr8gd2naqv54xs3vlrqmcbl9d2in66kd0dr2i41l3qj7"; depends=[Formula]; }; CUFF = derive2 { name="CUFF"; version="1.5"; sha256="1cphwhimzmsljfjvfvpld4mixznlsg5azzv7dwrgnh8q4wpnaxpc"; depends=[openxlsx xtable]; }; CUMP = derive2 { name="CUMP"; version="2.0"; sha256="0rdscywmi4sylpjpr8r472iapddizb1mqyrd532cvw6frxins7w0"; depends=[]; }; @@ -574,10 +597,11 @@ in with self; { CaDENCE = derive2 { name="CaDENCE"; version="1.2.5"; sha256="1z3p5y1l67r470x6wrhnyjvw1ndppcm08fpj99x122j7kn6byff2"; depends=[pso]; }; Cairo = derive2 { name="Cairo"; version="1.5-9"; sha256="1x1q99r3r978rlkkm5gixkv03p0mcr6k7ydcqdmisrwnmrn7p1ia"; depends=[]; }; Calculator_LR_FNs = derive2 { name="Calculator.LR.FNs"; version="1.3"; sha256="03qg9rnz623dwnp68xhhsh9788s49n6xp0migg1nnjaqhrahlgdd"; depends=[]; }; - CaliCo = derive2 { name="CaliCo"; version="0.1.0"; sha256="1fz4sx6wsrkmcfjjgjn7z26m266m844qz8ms4vk6bnhx0h1rp6qa"; depends=[coda DiceDesign DiceKriging FactoMineR ggplot2 MASS Matrix R6 Rcpp RcppArmadillo testthat]; }; - CalibrateSSB = derive2 { name="CalibrateSSB"; version="1.0"; sha256="1r3318rzh29cgq72gdp16z60xkan7hyh1vj4gjg3pzbxy8zawqxx"; depends=[survey]; }; + CaliCo = derive2 { name="CaliCo"; version="0.1.1"; sha256="16a6hfd3s7dzb6mvpyn4fkdi5irfjsbal7niky2g6p54290va982"; depends=[coda DiceDesign DiceKriging ggplot2 gridExtra gtools MASS Matrix R6 Rcpp RcppArmadillo]; }; + CalibratR = derive2 { name="CalibratR"; version="0.1.1"; sha256="0ka7amcml15qifwpw4phpn12r9qjn0dvlrlraf3af971yjmwc745"; depends=[doParallel fitdistrplus foreach ggplot2 pROC reshape2]; }; + CalibrateSSB = derive2 { name="CalibrateSSB"; version="1.1"; sha256="0rqa6xbxzqv0ks3i4pmmzczhf6g3ss6mb96g3d71y9xa6pzdxjjp"; depends=[survey]; }; Canopy = derive2 { name="Canopy"; version="1.3.0"; sha256="0979hpphzhf4v71jx0shh3l8nffmpsn9l6f8ip2wxzcyx571i1wd"; depends=[ape fields pheatmap scatterplot3d]; }; - CarletonStats = derive2 { name="CarletonStats"; version="1.3"; sha256="1a8ic2ny2zkqy6xsnzhlc3hybhk200d8jbdbjfy7jav7n757kr0y"; depends=[]; }; + CarletonStats = derive2 { name="CarletonStats"; version="2.0"; sha256="0pgzvw6gf8kjv8ndprwp4wlgdgh5sb75ga8z5syfw57fb05v7ac3"; depends=[]; }; CaseBasedReasoning = derive2 { name="CaseBasedReasoning"; version="0.1"; sha256="0hwll17j0br8sr0ci3bfa5rx4r36hr7myq7b5fav664zjxdh9wr4"; depends=[cowplot data_table dplyr magrittr R6 ranger Rcpp RcppArmadillo RcppParallel rms survival tidyverse]; }; CatDyn = derive2 { name="CatDyn"; version="1.1-0"; sha256="0bdixcf1iwbmjd2axi6csrzms25ghdj4r6223qhk2b54wlmbzaiz"; depends=[BB optimx]; }; CatEncoders = derive2 { name="CatEncoders"; version="0.1.1"; sha256="1q9wzq06lac8z9y8b65alsxpb48bw8wqmifd893kknk51xq6r9kl"; depends=[data_table Matrix]; }; @@ -596,16 +620,17 @@ in with self; { CerioliOutlierDetection = derive2 { name="CerioliOutlierDetection"; version="1.1.9"; sha256="0s3pd4y165v69m4wmg9jlc7dl4gz64la9yic67l3n4242wa84p19"; depends=[robustbase]; }; CfEstimateQuantiles = derive2 { name="CfEstimateQuantiles"; version="1.0"; sha256="1qf85pnl81r0ym1mmsrhbshwi4h1iv19a2wjnghbylpjaslgxp6i"; depends=[]; }; ChIPtest = derive2 { name="ChIPtest"; version="1.0"; sha256="1yn5b5s56k2dbhw6damxj18xbaiz180ym7fiq2i3p2gkcgwpddbz"; depends=[]; }; - ChainLadder = derive2 { name="ChainLadder"; version="0.2.6"; sha256="0mpb7br76ng3m9g4ncx2g628zmjyf1rvi3lyxmfsmilpq6vh30n1"; depends=[actuar cplm ggplot2 lattice MASS Matrix reshape2 statmod systemfit tweedie]; }; + ChainLadder = derive2 { name="ChainLadder"; version="0.2.7"; sha256="15d81hydbgz3j4cv4br35q9jiqlbiz8q27vylqg319y8z1p6wbgb"; depends=[actuar cplm ggplot2 lattice MASS Matrix reshape2 statmod systemfit tweedie]; }; ChangepointTesting = derive2 { name="ChangepointTesting"; version="1.0"; sha256="1nb78b1jpp0wpy9ah2fxkh53hlmb2f82b68msbfhancb8zp2lclv"; depends=[]; }; - ChannelAttribution = derive2 { name="ChannelAttribution"; version="1.13"; sha256="1nkz8n3a6f0xl56py45pv0rp0n0kmz3a1m616w38mjjlcypdalwq"; depends=[Rcpp RcppArmadillo]; }; + ChannelAttribution = derive2 { name="ChannelAttribution"; version="1.14"; sha256="1rasn1ghk4k0crdvxs9l8xjajdxvjsy7rwx9gz0nf41rw8pm16qa"; depends=[Rcpp RcppArmadillo]; }; ChannelAttributionApp = derive2 { name="ChannelAttributionApp"; version="1.1"; sha256="0qy92ij1riynz7dhri3z85pafww5w9j1gx1bcgr8phlr32a7had7"; depends=[ChannelAttribution data_table ggplot2 shiny]; }; Chaos01 = derive2 { name="Chaos01"; version="1.1.1"; sha256="0ibxibmlyc6wkhqj2achwkwdkniin60y8xh8b80nq6ggmm7w9crw"; depends=[]; }; ChaosGame = derive2 { name="ChaosGame"; version="0.3"; sha256="0nfp2qnhzpncs0yd5rknspin6c4hidqhxdd973ysiivg63wxwz8d"; depends=[colorRamps ggplot2 gridExtra plot3D RColorBrewer rgl sphereplot]; }; CharFun = derive2 { name="CharFun"; version="0.1.0"; sha256="0cqy1na1lh9w3nspy68yylali9y5b64jlgh4fyzas556239dnyk7"; depends=[Bessel]; }; ChargeTransport = derive2 { name="ChargeTransport"; version="1.0.2"; sha256="0mq06ckp3yyj5g1z2sla79fiqdk2nlbclm618frhqcgmq93h0vha"; depends=[]; }; CheckDigit = derive2 { name="CheckDigit"; version="0.1-1"; sha256="0091q9f77a0n701n668zaghi6b2k3n2jlb1y91nghijkv32a7d0j"; depends=[]; }; - ChemoSpec = derive2 { name="ChemoSpec"; version="4.4.97"; sha256="0kdcwv9kncv2r5mabp0mf9bmnajcnxmqavrl2lpn3d2pji6pv1qq"; depends=[plyr]; }; + ChemoSpec = derive2 { name="ChemoSpec"; version="5.0.88"; sha256="1c2c4fd4ajnzca82c9jkp81dxgra15bhxdhzdbnxjxzfifq1gsff"; depends=[ChemoSpecUtils plyr]; }; + ChemoSpecUtils = derive2 { name="ChemoSpecUtils"; version="0.1.62"; sha256="0yakbzyi1xdnydjixcp53rah8qcm7sg4j18ha2x1qapmzalpbr0y"; depends=[plyr RColorBrewer robustbase]; }; ChemometricsWithR = derive2 { name="ChemometricsWithR"; version="0.1.11"; sha256="00z09bplm5qvd31y7m4b4knsrl0n27j9635m1gdak6lg4db4nxrd"; depends=[devtools kohonen MASS pls]; }; ChoR = derive2 { name="ChoR"; version="0.0-4"; sha256="08mildsx542zfm0kcdakcv7c71hb4jgbcq1lhidf0fz76zj1pzk1"; depends=[commonsMath rJava]; }; ChocoLattes = derive2 { name="ChocoLattes"; version="0.1.0"; sha256="0ircdar4fswaf34969gzgn83ia891jvwl29jn4s9a87cc4qagzgr"; depends=[ggplot2 knitr plotly R_utils rmarkdown WriteXLS XML]; }; @@ -619,33 +644,36 @@ in with self; { Cite = derive2 { name="Cite"; version="0.1.0"; sha256="1gfjirhswh4dkz88z4gl8m8jznqrvcgd4z3mnszyg1k5w3avlf1q"; depends=[miniUI RefManageR rstudioapi shiny]; }; CityPlot = derive2 { name="CityPlot"; version="2.0"; sha256="0lskgxmagqjglvpq39hgbygkf4qp28i2bj6b4m2av1s3pzb4465g"; depends=[]; }; CityWaterBalance = derive2 { name="CityWaterBalance"; version="0.1.0"; sha256="0nvm6bv2cxszjf33xgn1xcvhrgrgbdcar0jahwf7bs03gdlpmgi1"; depends=[dataRetrieval dplyr EcoHydRology geoknife lubridate reshape2 tgp xts zoo]; }; - Ckmeans_1d_dp = derive2 { name="Ckmeans.1d.dp"; version="4.2.1"; sha256="1jx5419r2c55qxh4kfjdm37594bqcalqgdrqihsr8aafxhh96b8z"; depends=[]; }; + Ckmeans_1d_dp = derive2 { name="Ckmeans.1d.dp"; version="4.2.2"; sha256="15arwppq78zvjxhvhm4kal0x0a9cwjbgmi5xhq3vch8ppwzvm2mh"; depends=[Rcpp]; }; ClamR = derive2 { name="ClamR"; version="2.1-1"; sha256="0raz1n79g24a9mc93zj49r20xcmdziw6vvcw5sd3qyjp1ycia13c"; depends=[]; }; ClassComparison = derive2 { name="ClassComparison"; version="3.1.6"; sha256="1y0yx3qnd5mkbqjxyfjjg2y0c0b9jjwn71z97h82ya5ci3fffndi"; depends=[Biobase oompaBase]; }; - ClassDiscovery = derive2 { name="ClassDiscovery"; version="3.3.7"; sha256="03lp1dbp2mzrzk1hn7nkp7nm1ngs0qndlk3zz7qjh3a67x7xr5p1"; depends=[Biobase cluster mclust oompaBase oompaData]; }; + ClassDiscovery = derive2 { name="ClassDiscovery"; version="3.3.9"; sha256="0hwaks634vg7lslb4kr5rl9p5y7n0ypp2v088a1ix9r40ag4a75p"; depends=[Biobase cluster mclust oompaBase oompaData]; }; CleanBSequences = derive2 { name="CleanBSequences"; version="0.4.0"; sha256="12s24v2kfyc32pm34ibw58zzjqhzwlrqrkhl0m70jcqvn50b5r98"; depends=[Biostrings]; }; ClickClust = derive2 { name="ClickClust"; version="1.1.5"; sha256="0b46f453mffg4ym6yvmh7g3v05mc9gphwfra75j28y1425s87yvw"; depends=[]; }; + CliftLRD = derive2 { name="CliftLRD"; version="0.1-1"; sha256="0qsdv568klxg6chgw329jbfjmf6w61hly2vxp90yzdfkca03z2s4"; depends=[CNLTreg liftLRD]; }; ClimClass = derive2 { name="ClimClass"; version="2.1.0"; sha256="1r836md31z2r5d9xckkbalzbhm4kf5paljv71kxpy53q92k7yi91"; depends=[geosphere ggplot2 reshape2]; }; ClimDown = derive2 { name="ClimDown"; version="1.0.2"; sha256="0dbv5vn985bi9nqxhq7jcj6k38s8dlbqnln3adgd0ih2fwilvalg"; depends=[abind fields foreach ncdf4 PCICt seas udunits2]; }; + ClimProjDiags = derive2 { name="ClimProjDiags"; version="0.0.1"; sha256="0ylw4hb8isy0ixc7ai3wda8pr67slrc5999kda688p9qi699nip4"; depends=[climdex_pcic multiApply PCICt plyr]; }; ClinicalTrialSummary = derive2 { name="ClinicalTrialSummary"; version="0.1.0"; sha256="1lqf2ksgchl1j5hfkz7r5yczvkjgi3238k8nkfkd70nyil9vjq06"; depends=[Rcpp]; }; CluMix = derive2 { name="CluMix"; version="2.1"; sha256="080gd6v8yj83djmf4wg7cwk6q6w6gsg4xfsgw5qd6z8h3kpyn45m"; depends=[Biobase ClustOfVar DescTools extracat FD gplots Hmisc marray Matrix]; }; - ClueR = derive2 { name="ClueR"; version="1.3"; sha256="04axd5wrh8xszyvm6kcvhr3qs0rx9nj0z99j26qijf5w80lmhaki"; depends=[e1071]; }; + ClueR = derive2 { name="ClueR"; version="1.4"; sha256="0awl3ag48idg0396hcgqrh5f16mbgximr5xbxjiimib5zysdc558"; depends=[e1071]; }; ClusVis = derive2 { name="ClusVis"; version="1.1.0"; sha256="17cn3hm37jv10aybaidy89kch6814hdi8g44s94xa9li7nixzass"; depends=[MASS mgcv mvtnorm Rcpp RcppArmadillo Rmixmod VarSelLCM]; }; ClustGeo = derive2 { name="ClustGeo"; version="2.0"; sha256="1p5k2w1k7hnacbazzj2yhxh4z2jngnsl4v5a9b3c8z1dr4nhcwxc"; depends=[sp spdep]; }; ClustMMDD = derive2 { name="ClustMMDD"; version="1.0.4"; sha256="0sblf3crpai53dflhyi27yn6mg0xyy9dxhwsk8j57sq5vr50x686"; depends=[Rcpp]; }; ClustOfVar = derive2 { name="ClustOfVar"; version="1.1"; sha256="0grhkab7s58ji4cf7cxh7ahd2dxrj8aqfdf3119b40zxkxbwxcr0"; depends=[PCAmixdata]; }; - ClustVarLV = derive2 { name="ClustVarLV"; version="1.5.1"; sha256="11zydj3iq15sg84kny6nklpmh8wj9j9nklkknzfqnaagai8jgsmy"; depends=[Rcpp]; }; + ClustVarLV = derive2 { name="ClustVarLV"; version="1.6.0"; sha256="1425qgkr4ypbgi59phb9m0haahqc9g4jvjv5lmizaxph10r6gimi"; depends=[doParallel foreach iterators Rcpp RcppEigen]; }; Cluster_OBeu = derive2 { name="Cluster.OBeu"; version="1.2.1"; sha256="18is8aa496qr7afmyqy12s267ans0hhzy0xs8nzr3qp70mwrbbh1"; depends=[car cluster clValid data_tree dendextend jsonlite mclust RCurl reshape reshape2 stringr tibble]; }; ClusterBootstrap = derive2 { name="ClusterBootstrap"; version="1.0.0"; sha256="0m1lfp27vn3ybwimwkrihff5v2bvdc4c46x8bha8hw0wma14lw5i"; depends=[]; }; - ClusterR = derive2 { name="ClusterR"; version="1.1.2"; sha256="04charq9ydxiy8qvign3nc3ksg5v8d7jq39kdx7nndwgyjsidaic"; depends=[FD ggplot2 gmp gtools OpenImageR Rcpp RcppArmadillo]; }; + ClusterR = derive2 { name="ClusterR"; version="1.1.5"; sha256="16jx47d1w8yshg2w537399ck3z5wfsazwqfbv0kmvi0iw8ss9bka"; depends=[FD ggplot2 gmp gtools OpenImageR Rcpp RcppArmadillo]; }; ClusterRankTest = derive2 { name="ClusterRankTest"; version="1.0"; sha256="01gzalhibqcdx3a6yc2cm1v77rscva73v5m5m0qkrgqdp9c8ph2a"; depends=[]; }; ClusterStability = derive2 { name="ClusterStability"; version="1.0.3"; sha256="1laa5m3y1rc7jr8q3i9qb3izs7qmadz169w9xm8q3mm3834ngn9b"; depends=[cluster clusterCrit copula Rcpp WeightedCluster]; }; ClusteredMutations = derive2 { name="ClusteredMutations"; version="1.0.1"; sha256="1n31nnvpjh1faw751k8m3ga3wfl0yhdpnszwckqhfzlma1jr8z04"; depends=[seriation]; }; CoClust = derive2 { name="CoClust"; version="0.3-2"; sha256="04xv807785xv9kdspsspx1302ardv8gda06kd590lgawjixai7dh"; depends=[copula gtools]; }; - CoDiNA = derive2 { name="CoDiNA"; version="1.0.0"; sha256="1anc127d4xx1yks5kq2glcv8sijs0sfab9wjs7j9g1aqp97hmk33"; depends=[data_table geometry igraph magrittr plot3D plyr reshape2 visNetwork]; }; + CoDiNA = derive2 { name="CoDiNA"; version="1.1"; sha256="0gmh5s93372hl77s46wpnxp9m2r0zzhb6m1yixpd1450mlkj7rqb"; depends=[data_table igraph magrittr plyr visNetwork]; }; CoFRA = derive2 { name="CoFRA"; version="0.1002"; sha256="0ldf84dxaanww3qkf64mz5gv3yv2rjp9m6dy64xckds66vw6x0m3"; depends=[gplots stringr]; }; CoImp = derive2 { name="CoImp"; version="0.3-1"; sha256="0zj152w4cvnbfl144ggs3ixmyywxf9dqhh04jfydmv2a8n6px89n"; depends=[copula gtools locfit nnet]; }; - CodeDepends = derive2 { name="CodeDepends"; version="0.6.0"; sha256="0gyvafhqrjgy81z3b7ii8p6rxi2zaakvrxb52fnbr616lk8xlmfw"; depends=[codetools graph XML]; }; + CoRpower = derive2 { name="CoRpower"; version="1.0.0"; sha256="1pndjv2qvnlyi8gj41qp03vwv2m4mbj5srs9038ibnmci9ngybnf"; depends=[osDesign survival]; }; + CodeDepends = derive2 { name="CodeDepends"; version="0.6.5"; sha256="0l7kiv3awx50glf5cs841b4zzsff1ml90f0zr868ygvwsr4ps1hq"; depends=[codetools graph XML]; }; CoinMinD = derive2 { name="CoinMinD"; version="1.1"; sha256="0invnbj5589wbs0k2w5aq9qak7axc3s0g9nw85c48lnl0v95s91i"; depends=[MCMCpack]; }; CollapsABEL = derive2 { name="CollapsABEL"; version="0.10.11"; sha256="0libm1wv34av3vm2vvbqcnxjh4y1rwfi8qzjca8qdz9490vngags"; depends=[biganalytics bigmemory collUtils dplyr ggplot2 haplo_stats R_utils rJava RSQLite stringr]; }; CollapseLevels = derive2 { name="CollapseLevels"; version="0.2.0"; sha256="1fn5k83lh0vw5j9vhq0x6ksbkrm25acpslav85wfyknsj9vzmzid"; depends=[dplyr ggplot2 lazyeval magrittr]; }; @@ -659,7 +687,7 @@ in with self; { CombinePortfolio = derive2 { name="CombinePortfolio"; version="0.3"; sha256="0w4mw748ix7jyqfirr8bm93i742y7bpir7q5x1j3r9cqpi9h5zfv"; depends=[]; }; CommEcol = derive2 { name="CommEcol"; version="1.6.5"; sha256="02xra47znnbnsgxy6xinyk2dv8asshd4fgh7bn6qf7m6p4d743pj"; depends=[ape gmp picante vegan]; }; CommT = derive2 { name="CommT"; version="0.1.1"; sha256="1kimm8z3k7p5lxsjnkb203js2rqn09grywxs890fab1hhgssgv2r"; depends=[ape ggplot2 gridExtra phangorn reshape]; }; - CommonJavaJars = derive2 { name="CommonJavaJars"; version="1.0-5"; sha256="0kwf504g1izyy7hxss21dgz26w0spxibdlacrjdh7q10z799hfhh"; depends=[]; }; + CommonJavaJars = derive2 { name="CommonJavaJars"; version="1.0-6"; sha256="0l1zqygklv1s3xr6pjjrji3wmyqg7258qvgwf9c2qjim8p8y8lsr"; depends=[]; }; CommonTrend = derive2 { name="CommonTrend"; version="0.7-1"; sha256="088pg2hy2g2jgs84xawrnsf7gpvrpqjsimkx7g0i5r5fmkx169f9"; depends=[MASS urca]; }; CommunityCorrelogram = derive2 { name="CommunityCorrelogram"; version="1.0"; sha256="1wkrm5lil595sc4ih3qsf4sgvfipzlav0n7339ixqw9zxm2pg4nj"; depends=[vegan]; }; Comp2ROC = derive2 { name="Comp2ROC"; version="1.1.4"; sha256="06hpbid9z1pzg7k4gqp2zn8l7sm375z32fsn54i27qbl3inp7m2d"; depends=[boot ROCR]; }; @@ -682,38 +710,38 @@ in with self; { CondReg = derive2 { name="CondReg"; version="0.20"; sha256="1ffnrjfjcb66i9nyvidkcn4k9pcj4r7xanjwzcxcrj2qm39apkqx"; depends=[]; }; ConfigParser = derive2 { name="ConfigParser"; version="1.0.0"; sha256="0jjh6gz5qcqhirzkmg7a4lnf8n3mjly15x2mvbvdpjkk7iv3w9m3"; depends=[ini R6]; }; ConfoundedMeta = derive2 { name="ConfoundedMeta"; version="1.3.0"; sha256="17l6dfff2v0a4p022qclrmkzi78ga9adkgxgrgk9imz0n9m9424d"; depends=[ggplot2 metafor]; }; - Conigrave = derive2 { name="Conigrave"; version="0.3.0"; sha256="15zfaivawk83xr6gx5ij1xc43z5vgci8x0hglxjnhla02zn0zh9f"; depends=[ggplot2 magrittr miceadds mitools stringdist]; }; + Conigrave = derive2 { name="Conigrave"; version="0.4.1"; sha256="0gralyfz3vq81b34s81mjmblkpbigjqb6r4wkz53xfkd4dbqlchc"; depends=[dplyr ggplot2 magrittr miceadds mitools ppcor stringdist stringr]; }; ConjointChecks = derive2 { name="ConjointChecks"; version="0.0.9"; sha256="097mhiz8zjmmkiiapr3zfx7v35xirg57nqp1swd72dixaa23nhr1"; depends=[]; }; ConnMatTools = derive2 { name="ConnMatTools"; version="0.3.3"; sha256="0zsn3al3di0fd9hkqljpqqy4zbmh97xr6cdi4fzv80ax81fjfqyk"; depends=[]; }; ConsRank = derive2 { name="ConsRank"; version="2.0.1"; sha256="18f1gqa46f8jrcf2zj4njyy78cl0scjs9k8s9mvg0f9dpr44xnan"; depends=[gtools proxy rgl]; }; - ContaminatedMixt = derive2 { name="ContaminatedMixt"; version="1.3.2"; sha256="0761wfjxh26kf4q1qcfzfaj52553yiw1ny6l84r3wzzx4hv893qy"; depends=[caret mclust mixture mnormt mvtnorm]; }; + ContaminatedMixt = derive2 { name="ContaminatedMixt"; version="1.3.3"; sha256="16pkpgvg46xscp6z2xlhlnfzc9048jlgqxxbqa4c90z7dclcmrqk"; depends=[caret mclust mixture mnormt mvtnorm]; }; ContourFunctions = derive2 { name="ContourFunctions"; version="0.1.0"; sha256="1hlff3wx8r1wpkhrz0n27wjnzy6z2q8s9smyb906gwwa9xga7njy"; depends=[]; }; ConvergenceClubs = derive2 { name="ConvergenceClubs"; version="1.4.1"; sha256="0f74aaglby4hmg72957cj3y7jdchy5kq793skl7yidrjc1nk04ib"; depends=[lmtest sandwich]; }; ConvergenceConcepts = derive2 { name="ConvergenceConcepts"; version="1.2.1"; sha256="0kl67ds6369mxl2i93h43r00ji12qkg0k9m4jhcxsb0ydd8rfqgp"; depends=[lattice tkrplot]; }; - CoordinateCleaner = derive2 { name="CoordinateCleaner"; version="1.0-7"; sha256="00x2ijyg1bj2xp679i453d4fd58qp7mfj3pvv3cddh0hl8yfns18"; depends=[geosphere ggplot2 raster rgeos rnaturalearth sp]; }; - Copula_Markov = derive2 { name="Copula.Markov"; version="1.1"; sha256="0pgzrgd9bzf2qh9b7h0y4mmszlxk1wxdwlid3xh7rk7pif3mw3qd"; depends=[]; }; + CoordinateCleaner = derive2 { name="CoordinateCleaner"; version="2.0-3"; sha256="1kb21a8mp3blgnvyzqcwh1zz1mkdq6c759g9dlw3dzp2gnpzl5zp"; depends=[dplyr geosphere ggplot2 raster rgdal rgeos rnaturalearth sp tidyselect]; }; + Copula_Markov = derive2 { name="Copula.Markov"; version="2.1"; sha256="09036bnxb0r0k6lk6sb258yrw4q458nmxinmvnishnq5bifps4v4"; depends=[]; }; CopulaDTA = derive2 { name="CopulaDTA"; version="1.0.0"; sha256="1bx0jvlbhaxf4yhrfpd5l5zp7kmp6f17ckb1y9974sgc7s3hpqcd"; depends=[ggplot2 plyr reshape2 rstan]; }; CopulaREMADA = derive2 { name="CopulaREMADA"; version="1.1"; sha256="044si0nwniiglrcg6mjvs4z3hk6hhhsy49c6pigy6yf1wvvqxp4m"; depends=[matlab statmod tensor]; }; CopulaRegression = derive2 { name="CopulaRegression"; version="0.1-5"; sha256="0dd1n7b23yww36718khi6a5kgy8qjpkrh0k433c265653mf1siq8"; depends=[MASS VineCopula]; }; - CopyDetect = derive2 { name="CopyDetect"; version="1.2"; sha256="1sahrlg1gk1q8ciq0a8hxrlyci5i8jxz8pjpy04alckxdrxfpqbi"; depends=[irtoys]; }; + CopyDetect = derive2 { name="CopyDetect"; version="1.3"; sha256="1g3bwd805h62x93xvvn67acf9v6vn7s7ghxpvjhwcfdfj7fwzh6l"; depends=[mirt]; }; + CorDiff = derive2 { name="CorDiff"; version="1.0"; sha256="12rgfhygrdq1ign4ybr8g171wxic8zbp83n1xdsnqpj910k5jdr5"; depends=[mcc]; }; CorReg = derive2 { name="CorReg"; version="1.2.8"; sha256="18l9aiv2ipvs14ycnzq99yvnkws38wnj42zbk5jqgv33kn37qbx2"; depends=[corrplot elasticnet glmnet lars MASS Matrix mclust mvtnorm Rcpp RcppEigen Rmixmod rpart]; }; - CorShrink = derive2 { name="CorShrink"; version="0.1-5"; sha256="03g5njb191nqiy0lmk8jrwyrnl3w733b8h0krkbsjh2zravyw1xc"; depends=[ashr corpcor corrplot gridExtra Matrix reshape2]; }; + CorShrink = derive2 { name="CorShrink"; version="0.1-6"; sha256="15ay6ws9216lv15mpgldank3klw3zz5j4nwvv1s88jjfn2ln5c1l"; depends=[ashr corpcor corrplot glmnet gridExtra MASS Matrix reshape2 SQUAREM]; }; Corbi = derive2 { name="Corbi"; version="0.4-2"; sha256="0h088iplryaipnfp8svw3djh016z23lv66q51gfbqpvchvjdwypw"; depends=[CRF Matrix mpmi]; }; CorporaCoCo = derive2 { name="CorporaCoCo"; version="1.1-0"; sha256="1s3wlcy6mnw9riivw5lc4gd6bjbsd77m15ipr95g46isdcrli8zb"; depends=[data_table RColorBrewer rlist]; }; CorrBin = derive2 { name="CorrBin"; version="1.5"; sha256="1kg8kms76z127j2vmf7v162n0sh2jqylw4i7c35x5sig4q22m9gy"; depends=[boot combinat dirmult geepack mvtnorm]; }; CorrMixed = derive2 { name="CorrMixed"; version="0.1-13"; sha256="02zg5kmv5qxnasnz872r3z7x7dmdcniq1x5xyfnnb3niwkdjgxzx"; depends=[nlme psych]; }; CorrToolBox = derive2 { name="CorrToolBox"; version="1.5"; sha256="1ggrm144zmi54cqb5l2nif7dn1zb1kn31i1xhxc4jwr7fn380iyi"; depends=[BinNonNor BinOrdNonNor GenOrd moments mvtnorm psych]; }; - CorrectOverloadedPeaks = derive2 { name="CorrectOverloadedPeaks"; version="1.2.14"; sha256="1if4qb1d6mg3435pk3znln8id8fj12n3j9sjv4zn104v2fr90mhr"; depends=[caTools digest xcms XML]; }; + CorrectOverloadedPeaks = derive2 { name="CorrectOverloadedPeaks"; version="1.2.15"; sha256="1hdr2zdms6vbnf6xw079c127diygzp09vqizmmh0yrbc5sx2cmb8"; depends=[bitops digest xcms XML]; }; CorrectedFDR = derive2 { name="CorrectedFDR"; version="1.0"; sha256="15047cfjniljzhznkbzq3hyq221y9k7fa04f69zm0k0sxr627gxg"; depends=[]; }; Correlplot = derive2 { name="Correlplot"; version="1.0-2"; sha256="0prxnbi7ga5d23i0i4qpynfb3zrsgjxam47km6nsj1prakdkrq7w"; depends=[calibrate xtable]; }; CosW = derive2 { name="CosW"; version="0.1"; sha256="12l4w8b5jnr8773hxk7khrdn705x6bdbw7s8z8w95bfbbi12dj6v"; depends=[fdrtool pracma]; }; - CosmoPhotoz = derive2 { name="CosmoPhotoz"; version="0.1"; sha256="04girid6wvgyrk8ha81mdqjx2mmzifz57l1hzcgrdnzmjmm3vlmp"; depends=[arm COUNT ggplot2 ggthemes gridExtra mvtnorm pcaPP shiny]; }; Counterfactual = derive2 { name="Counterfactual"; version="1.1"; sha256="0mz0h5zsmca8fww7nq08m9cld2zbaydn8qad5f2g6vxn382842p9"; depends=[doParallel doRNG foreach Hmisc quantreg survival]; }; - Countr = derive2 { name="Countr"; version="3.4.1"; sha256="1qv773psgmk6ndznl4f2364vadh9qimagm38v5a3xzjnn9dpd23b"; depends=[boot car dplyr flexsurv Formula lattice lmtest MASS Matrix numDeriv optimx pscl RColorBrewer Rcpp RcppArmadillo Rdpack standardize VGAM xtable]; }; - CountsEPPM = derive2 { name="CountsEPPM"; version="2.1"; sha256="1w1l4kbk8c2prq7f38maz0fc44j9za6cmj0vydmcgscb9s6f3mg7"; depends=[expm Formula numDeriv]; }; + Countr = derive2 { name="Countr"; version="3.5.2"; sha256="0f45pxxl09avf4k6lzlhykd1y07hvpc3d68bc2y7nrxhpipwl5yl"; depends=[boot car dplyr flexsurv Formula lattice lmtest MASS Matrix numDeriv optimx pscl RColorBrewer Rcpp RcppArmadillo Rdpack standardize VGAM xtable]; }; + CountsEPPM = derive2 { name="CountsEPPM"; version="3.0"; sha256="0iw7sfrb4yyaagwm1f4q9av5zvzia1mp2ns287ppsw3k248lz0kb"; depends=[expm Formula lmtest numDeriv]; }; CovSel = derive2 { name="CovSel"; version="1.2.1"; sha256="02fsiykbg96ynqw25vfyrams7fs39xjmfhvb23zjbqb7ql6d0xdk"; depends=[dr MASS np]; }; CovSelHigh = derive2 { name="CovSelHigh"; version="1.1.1"; sha256="0dvvpkqml2k00gicpgp475z1rjspq3s37ys1mam29k54qlshhny6"; depends=[bartMachine bindata bnlearn doParallel doRNG foreach glmnet MASS Matching randomForest tmle xtable]; }; - CovTools = derive2 { name="CovTools"; version="0.3.1"; sha256="0ph7rip2lm71qb386diw93n84jaqijz6bqn0i6zgd5gg8j3szx46"; depends=[doParallel expm foreach geigen Matrix mvtnorm pracma Rcpp RcppArmadillo Rdpack shapes]; }; + CovTools = derive2 { name="CovTools"; version="0.5.0"; sha256="1skkv1i7q9sw71c95606ikwq93nlj0bs42w7j70jv1zbvq4sdmfz"; depends=[doParallel expm foreach geigen Matrix mvtnorm pracma Rcpp RcppArmadillo Rdpack shapes]; }; CoxBoost = derive2 { name="CoxBoost"; version="1.4"; sha256="1bxkanc8zr4g3abn4ds5wqibv65flvm4y648fs9s0l4vc9vmyshg"; depends=[Matrix prodlim survival]; }; CoxPhLb = derive2 { name="CoxPhLb"; version="1.0.0"; sha256="1j8dvbjv4h0zdjvwvpswdlsb9pf3gxixh2rhl0m1kxm6f6h5ig0z"; depends=[survival]; }; CoxPlus = derive2 { name="CoxPlus"; version="1.1.1"; sha256="038wsz206bgc0pnzx403b5ihcwhxpkrpxmwvrvqcxf8333pb62l5"; depends=[Rcpp RcppArmadillo]; }; @@ -723,9 +751,9 @@ in with self; { Cprob = derive2 { name="Cprob"; version="1.4.1"; sha256="1m4ys8xpj1jbn3lf8fym935y94dxipiimsf9zxwyw5sy71y7skgq"; depends=[geepack lattice lgtdl prodlim tpr]; }; CreditMetrics = derive2 { name="CreditMetrics"; version="0.0-2"; sha256="16g3xw8r6axqwqv2f0bbqmwicgyx7nwzff59dz967iqna1wh3spi"; depends=[]; }; CreditRisk = derive2 { name="CreditRisk"; version="0.1.3"; sha256="09ks8xlsrbp3an1drcwmmd6df4fsfz61z21ma2p62a1pk0bnc86c"; depends=[fOptions]; }; - CrossClustering = derive2 { name="CrossClustering"; version="3.0"; sha256="0l9cdniqf63x4pfkf6y7c2qh056jwadqw45nz9jk78wamqq8hyqv"; depends=[cluster]; }; + CrossClustering = derive2 { name="CrossClustering"; version="4.0.3"; sha256="05lbdmblwmmv24h46ixxabbrp7mpajyv7raw1p5h0dmsbfbq9hi5"; depends=[assertive cli cluster crayon dplyr flip glue magrittr mclust purrr]; }; CrossScreening = derive2 { name="CrossScreening"; version="0.1.1"; sha256="1gig80r8p611ysn35ajx7xdjj5wnkcf1vspcf0i06dmh75xpm3w9"; depends=[plyr tables]; }; - CrossVA = derive2 { name="CrossVA"; version="0.9.1"; sha256="13skbazs1mh5am70qlwxhvxgfx4gwlzzq6zy3vdzaa3zbykkxlvw"; depends=[lubridate]; }; + CrossVA = derive2 { name="CrossVA"; version="0.9.3"; sha256="1nagbgcih6ix21js91vfpr4yjkhnirblgdmf04nn7ipv2ins8kw6"; depends=[lubridate stringi]; }; CrossValidate = derive2 { name="CrossValidate"; version="2.3.2"; sha256="1dlvkv712rz3gw03c04qlk0l0mqjyds3m3pnbszk4848zby5ac6r"; depends=[Modeler oompaBase]; }; Crossover = derive2 { name="Crossover"; version="0.1-17"; sha256="168j8fl6h7x1pia5f5c18yrf0y1lvznib8clq1mv0imb7cjzkkhi"; depends=[CommonJavaJars crossdes digest ggplot2 JavaGD MASS Matrix multcomp Rcpp RcppArmadillo rJava xtable]; }; CryptRndTest = derive2 { name="CryptRndTest"; version="1.2.2"; sha256="1cg0agwqp1f7pgxdf9wilwparklyfsv900r47fpihnqw3ycvbdai"; depends=[gmp kSamples LambertW MissMech Rmpfr sfsmisc tseries]; }; @@ -734,8 +762,9 @@ in with self; { CuCubes = derive2 { name="CuCubes"; version="0.1.0"; sha256="1cpazar85rp8xfjvy0vxivr61grzvxz7a9mirxvhynln964by6ns"; depends=[]; }; Cubist = derive2 { name="Cubist"; version="0.2.2"; sha256="1m45dpnr5djsfgqlinng6z0f2wbig2vbidlg19r3zcraqwn1agnd"; depends=[lattice reshape2]; }; CustomerScoringMetrics = derive2 { name="CustomerScoringMetrics"; version="1.0.0"; sha256="166v0hbxy4xgbfqh7sx6zsrv4pghqpimx5xry3h2qwynnvr4ng1a"; depends=[]; }; - Cyclops = derive2 { name="Cyclops"; version="1.3.4"; sha256="0iv4rsxy6zngjlbvwkx41np8phv49i6gp0f8yzb5k2azwksx2r3j"; depends=[BH bit ff ffbase MASS Matrix Rcpp RcppEigen RcppParallel survival]; }; - CytobankAPI = derive2 { name="CytobankAPI"; version="1.1.2"; sha256="0mv6f1v6kclz8ima9f0b3qdb7gc85nn2cnfnzb3vqhm9vvibz8ls"; depends=[curl httr jsonlite]; }; + CutpointsOEHR = derive2 { name="CutpointsOEHR"; version="0.1.2"; sha256="0r772zb7g10akcfnf2hnyvpvba4px9pgslyns7drmijdsh0ncnvj"; depends=[survival]; }; + Cyclops = derive2 { name="Cyclops"; version="2.0.1"; sha256="10zx49qhbzgkc18vv4yk1x63ywamxijwir92ls6zbsrdifn412pv"; depends=[BH bit ff ffbase MASS Matrix Rcpp RcppEigen survival]; }; + CytobankAPI = derive2 { name="CytobankAPI"; version="1.2.0"; sha256="1dg7gfxhamcnzkcdi0kyqs5vkwvmfv1wj5syay5z9j52lh6gp4ib"; depends=[curl httr jsonlite]; }; CytobankAPIstats = derive2 { name="CytobankAPIstats"; version="2.0"; sha256="0xczcgaxd8dv6fd1j5c8y4il852lq8859d1y16sxs8a3gqn9fbz2"; depends=[CytobankAPI pheatmap shiny shinyFiles xlsx]; }; CytobankBridgeR = derive2 { name="CytobankBridgeR"; version="1.0.0"; sha256="0m8gxbm3p9gvdszymqx10n5rzb406r4f70a0in798c56mp2rcsl4"; depends=[CytobankAPI]; }; D2C = derive2 { name="D2C"; version="1.2.1"; sha256="0qhq27978id0plyz9mgdi0r1sr3ixnvqm8w6hp5c2wjd1yhhh12s"; depends=[corpcor foreach gRbase lazy MASS randomForest RBGL Rgraphviz]; }; @@ -748,7 +777,7 @@ in with self; { DACF = derive2 { name="DACF"; version="1.0.0"; sha256="0hv7c9lk6ivj4iz953yn11iy5p611q4si4ghn9d5a9i229s5hig8"; depends=[]; }; DAISIE = derive2 { name="DAISIE"; version="1.4"; sha256="16653wwz20lhf3bpzflpj5d1h7j3cqyfaqk5gn24aifga2jc0wbb"; depends=[DDD deSolve Matrix subplex tensor]; }; DAKS = derive2 { name="DAKS"; version="2.1-3"; sha256="0vmpwxvksnmyq40faimbgpj0y3zbk519986n38ipwdfzllcg0zs4"; depends=[relations sets]; }; - DALEX = derive2 { name="DALEX"; version="0.2.3"; sha256="0v2dmc4nnz28qjc378138j0lri2rlbrmwz97xsn9z557y4hrrmmh"; depends=[ALEPlot breakDown factorMerger ggplot2 ggpubr pdp]; }; + DALEX = derive2 { name="DALEX"; version="0.2.4"; sha256="0zrgp266bmn0b87bf0gvi4yc2ngj4pvhw9qbmvnhqlifrqb55ir6"; depends=[ALEPlot breakDown factorMerger ggplot2 ggpubr pdp]; }; DALY = derive2 { name="DALY"; version="1.5.0"; sha256="1v7ld01xcn5jiygl1c3xhd5h71ip90lks87fs9gmpnivp8jz5cr5"; depends=[]; }; DAMOCLES = derive2 { name="DAMOCLES"; version="1.1"; sha256="07z8mynhqnk1zcvm84w09xzkiy2dfxwhmnpi6gaddr3p0waql4gj"; depends=[ape caper deSolve expm geiger matrixStats picante]; }; DAMisc = derive2 { name="DAMisc"; version="1.4-3"; sha256="1hic53vi7mj4fvggxjl4d3j4zw8wwczh6pldyi8idrhm45hw2nh4"; depends=[boot car effects gdata lattice MASS nnet pscl QRM sm VGAM xtable]; }; @@ -760,8 +789,10 @@ in with self; { DBI = derive2 { name="DBI"; version="1.0.0"; sha256="1x8wy2vg2gcgd9bww04qmf0dsn3kp0rfjd8q8j1r2x9zxccg25pz"; depends=[]; }; DBItest = derive2 { name="DBItest"; version="1.5-2"; sha256="05wizjm2b97fsdha2i391h38xb0zrkhnd036qvdcm0r5l0y56sm8"; depends=[blob DBI desc hms R6 testthat withr]; }; DBKGrad = derive2 { name="DBKGrad"; version="1.6"; sha256="0207zx0v1x3zhfbs0h1ssxc1b683k111f90k8ybhknb147104knr"; depends=[lattice minpack_lm SDD TSA]; }; + DBfit = derive2 { name="DBfit"; version="1.0"; sha256="19jdf693ygwfchlqvh0kywid14v0b53p33rr2dvmaqmsc6pfxbbf"; depends=[Rfit]; }; DCA = derive2 { name="DCA"; version="2.0"; sha256="1acy33vyf814kr0aj6kdvi9f1qzgynwwzv57ll01gd0iqq36374f"; depends=[coin elasticnet GPArotation locfdr modeest mvtnorm PMA]; }; DCD = derive2 { name="DCD"; version="0.1.0"; sha256="0p6vk8fdvpcvb1bb5fwy3h1v8y3djlvcm5jl5lnx30ngqj6d7rcj"; depends=[data_table doParallel foreach ggplot2 igraph lattice lsa Matrix plyr qlcMatrix Rdpack ROCR WGCNA]; }; + DCEM = derive2 { name="DCEM"; version="0.0.1"; sha256="0mk9x17c0jhlgcvn1n98mw8cykims0q0qwd067zzbinwhja2d9sv"; depends=[MASS matrixcalc mvtnorm]; }; DCG = derive2 { name="DCG"; version="0.9.2"; sha256="1s2dz0vnhdhq23fqds1m2jspaz8k5zvd76z1zlbi6nb5ja5n3j3w"; depends=[]; }; DCGL = derive2 { name="DCGL"; version="2.1.2"; sha256="1dhkdvdglpsr0fzrfrrr6q76jhwxgrcjsiqn56s082y7v366xvs4"; depends=[igraph limma]; }; DCL = derive2 { name="DCL"; version="0.1.0"; sha256="1ls3x3v0wmddfy7ii7509cglb28l1ix1zaicdc6mhwin0rpp2rx3"; depends=[lattice latticeExtra]; }; @@ -783,26 +814,27 @@ in with self; { DEMOVA = derive2 { name="DEMOVA"; version="1.0"; sha256="09dqhhhihphhdnplmhdq4q5zwc0qvqhirdrxa9x6fr43vwa5zfp4"; depends=[leaps]; }; DES = derive2 { name="DES"; version="1.0.0"; sha256="16p38i8ykwc8gjw6c9dhdwjjpa1b17n9wqhz3rhkbzjh978pky31"; depends=[]; }; DESnowball = derive2 { name="DESnowball"; version="1.0"; sha256="012kdnxmzap6afc3ffkcvk1mazlkp286av6g9fwz2wcbf5mh9n1m"; depends=[clue cluster combinat MASS]; }; + DEVis = derive2 { name="DEVis"; version="1.0.0"; sha256="11g7ycvs8z1bnnyl5y6sypgm29pywpp652kg1nzib1x3dyl8cxvl"; depends=[DESeq2 ggdendro ggplot2 ggsci ggthemes gridExtra MASS pheatmap plyr PoiClaClu RColorBrewer reshape2 SummarizedExperiment]; }; DEoptim = derive2 { name="DEoptim"; version="2.2-4"; sha256="10nlsvms5pf0wmn4z1lj6vnmpwr10q8nhdy5xy9rn7hd1627fm0a"; depends=[]; }; DEoptimR = derive2 { name="DEoptimR"; version="1.0-8"; sha256="1vz546hyjyhly70z62h5n3mn62b8llhhmim8ffp9y6jnnb0i2sc4"; depends=[]; }; - DEploid = derive2 { name="DEploid"; version="0.5.0"; sha256="18v1fyxf6pbkanwmncd9jx9l7c9dk3y9dbc89a4cp3qshfn4vbhi"; depends=[htmlwidgets magrittr plotly Rcpp rmarkdown scales]; }; + DEploid = derive2 { name="DEploid"; version="0.5.2"; sha256="0xjczfql6jl4jxxwvdn3gmwj8bawhj5w6hdamrb0yjdjlhdwb11y"; depends=[htmlwidgets magrittr plotly Rcpp rmarkdown scales]; }; DFIT = derive2 { name="DFIT"; version="1.0-3"; sha256="1h0wvcplb7j7dqz9hkaw30x92ngxzkdvkwpg0142hrqb201zfrac"; depends=[ggplot2 mvtnorm simex]; }; DGCA = derive2 { name="DGCA"; version="1.0.1"; sha256="1lqqzrsidkli4bk4jikq5f75jzqyzhv94n882yic5ndxgv26p9ic"; depends=[matrixStats WGCNA]; }; DGM = derive2 { name="DGM"; version="1.7.2"; sha256="0z0f8bazzsahvjkpfif50db700mqb7arcglwsfxcar9qdy082vsn"; depends=[data_table ggplot2 Rcpp RcppArmadillo reshape2]; }; DGVM3D = derive2 { name="DGVM3D"; version="1.0.0"; sha256="17cxv8rm7kmxms7v7hzbwbdwa3xl1hwgiljf97ppwswglqyik9iv"; depends=[rgl]; }; DHARMa = derive2 { name="DHARMa"; version="0.2.0"; sha256="0jh01z2ygz8hi0vh2fxw52ck0wia4hp44qc7v0bks8776gbwj8il"; depends=[ape doParallel foreach gap glmmTMB lme4 lmtest MASS mgcv qrnn sfsmisc]; }; - DHS_rates = derive2 { name="DHS.rates"; version="0.3.1"; sha256="1lwmd58q2pqynh2dj3alcrri8zwxayq92nn7hwzwlqw70xr5anqv"; depends=[haven matrixStats reshape survey]; }; + DHS_rates = derive2 { name="DHS.rates"; version="0.4.0"; sha256="12q5qn9k9svabqsya039axx1lnafcq4mlnnb0nyfdjhklnh7k870"; depends=[haven matrixStats reshape survey]; }; DIFboost = derive2 { name="DIFboost"; version="0.2"; sha256="0wyjk870n18lq0dwhm9ndsh5vv0d8wkrbcky68w454vzrrw1q9h8"; depends=[mboost penalized stabs]; }; DIFlasso = derive2 { name="DIFlasso"; version="1.0-3"; sha256="195wiy0jjkq6bh2b6wrjmr5l34pzx0i2qqvwp4pzv77sx737ds0v"; depends=[grplasso miscTools penalized]; }; DIFtree = derive2 { name="DIFtree"; version="2.1.4"; sha256="16cyd634jflaszpfq0ymwlbv57ci1iyffwai641jczn8cny504zl"; depends=[penalized plotrix]; }; DIME = derive2 { name="DIME"; version="1.2"; sha256="11l6mk6i3kqphrnq4iwk4b0ridbbpg2pr4pyqaqbsb06ng899xw0"; depends=[]; }; DIRECT = derive2 { name="DIRECT"; version="1.0.1"; sha256="00z4xlc9kxn19lw2b8xq6krsf5v3wfbr1ghl5ah5shr9dnv84lc1"; depends=[]; }; DISTRIB = derive2 { name="DISTRIB"; version="1.0"; sha256="0whwmmdx2k2vrjjkz4ww9v7z9ad3835819pby91119lyic27w727"; depends=[]; }; + DIconvex = derive2 { name="DIconvex"; version="1.0.0"; sha256="0bnrq9nmryshir6ll43nz20aaqmmw0zjvfml72cpwbvrma8a3qmz"; depends=[lpSolveAPI]; }; DJL = derive2 { name="DJL"; version="2.7"; sha256="1p0jd2hn6an3kkc85xkkj36x7iwi43k1yrnmzy0mb5qrbvx07hlj"; depends=[car lpSolveAPI]; }; DLASSO = derive2 { name="DLASSO"; version="2.0.2"; sha256="0xdygf6h89d9z4kqb46iqfxgdzq9dmkrxf9ypw78l4d8n9xx2gaa"; depends=[MASS]; }; - DLMtool = derive2 { name="DLMtool"; version="5.1.3"; sha256="0n7sx577fffxbxfbwy19py2hm00rb403n4fvn9j6pcdi433mfx59"; depends=[abind coda devtools ggplot2 ggrepel gridExtra knitr MASS mvtnorm openxlsx r4ss Rcpp RcppArmadillo readxl rmarkdown snowfall]; }; - DMMF = derive2 { name="DMMF"; version="0.4.0.1"; sha256="0fypj0a0kjzfghazs55mxkig9n3ngjmbi3xmdxkpa35jbn71bfdd"; depends=[raster rgdal sp]; }; - DMR = derive2 { name="DMR"; version="2.0"; sha256="1kal3bvhwqs00b6p6kl0ja35pcz9v9y569148qfhy94m319fcpzm"; depends=[magic]; }; + DLMtool = derive2 { name="DLMtool"; version="5.2.3"; sha256="1rkxpfk3pa566crl01z0nmkl44n1gxdp6idfhrc6p1jwccx9fgdv"; depends=[abind boot broom devtools dplyr fmsb ggplot2 ggrepel gridExtra kableExtra knitr MASS mvtnorm openxlsx purrr Rcpp RcppArmadillo readxl rfishbase rmarkdown shiny snowfall tidyr]; }; + DMMF = derive2 { name="DMMF"; version="0.5.0.2"; sha256="02sk1ykispkjdclsi5xp1m4vmf8mhcqm4q2z73xanvax1kqfb3v3"; depends=[raster rgdal sp]; }; DMRMark = derive2 { name="DMRMark"; version="1.1.1"; sha256="15wr6j0v9kvbv8y6flkp4svfqy059ziv89nxv91vp0pjmavhpdlz"; depends=[ellipse MCMCpack mvtnorm]; }; DMRnet = derive2 { name="DMRnet"; version="0.2.0"; sha256="1rbba8w4li240gw5z675d7skm72rh0zxzp4rhsn6ivj72jya7jw4"; depends=[glmnet grpreg]; }; DMwR = derive2 { name="DMwR"; version="0.4.1"; sha256="1qrykl9zdvgm4c801iix5rxmhk9vbwnrq9cnc58ms5jf34hnmbcf"; depends=[abind class lattice quantmod ROCR rpart xts zoo]; }; @@ -814,6 +846,7 @@ in with self; { DNetFinder = derive2 { name="DNetFinder"; version="1.0"; sha256="0q56c2389qaq3wsqpj8s95ncm0xmbl1slr0jmpixb48hhgk0l0ji"; depends=[flare]; }; DOBAD = derive2 { name="DOBAD"; version="1.0.6"; sha256="0ifrrfm4yp1416z58qgnak042rgj1xvqby2vvzgrv19z6b3250p3"; depends=[lattice Matrix numDeriv]; }; DODR = derive2 { name="DODR"; version="0.99.2"; sha256="16ia9j8vab8n2i6a17wz8nfvkfgj2gsyhxvwgxvjg2cz99hsbhdj"; depends=[Matrix npsm Rfit]; }; + DOS = derive2 { name="DOS"; version="1.0.0"; sha256="0vvkwn4wfvspbk74nb6124hdx9158h6yfksib14xqq7rx7c97ad4"; depends=[MASS]; }; DOT = derive2 { name="DOT"; version="0.1"; sha256="0qh5n57cp9c2n5yn59q4wggz82943pwfanp3kx869aba2x3sj30i"; depends=[V8]; }; DOvalidation = derive2 { name="DOvalidation"; version="1.1.0"; sha256="1mzws3w7djpxnfqxjcqwgia7p17kb0qlnzj6qcfg2m1vamb1cn2z"; depends=[]; }; DPBBM = derive2 { name="DPBBM"; version="0.2.5"; sha256="1qypxrcm3sb727lqb09ssjf3hblixqayw3qsyql01imrxwm609i2"; depends=[CEoptim gplots tmvtnorm VGAM]; }; @@ -822,10 +855,11 @@ in with self; { DPpackage = derive2 { name="DPpackage"; version="1.1-7.4"; sha256="0lfw55kbjwr1dqkd98p6488p6c0nh5pkfkc9wpds8wsqm38siad6"; depends=[MASS nlme survival]; }; DPtree = derive2 { name="DPtree"; version="1.0.1"; sha256="0d7zf695lwkx4gv50f08cbi3p3mjjay0qgrbmvybf9m15i4zmyd7"; depends=[MASS MCMCpack plyr Rdpack]; }; DREGAR = derive2 { name="DREGAR"; version="0.1.3.0"; sha256="15cplshs85r0z659mc7xmj5db7vc95wxs01c34isc22p8z0a287i"; depends=[msgps]; }; - DRIP = derive2 { name="DRIP"; version="1.3"; sha256="08v6sajgaqa0zvkr9hfzjxsj78acrkj6l9hjxkirbspg3fwqphk7"; depends=[caTools readbitmap]; }; + DRIP = derive2 { name="DRIP"; version="1.4"; sha256="1rds1161h19waqhiq08hqk5zcn48afccaggmb42xr1zyk31irpi6"; depends=[readbitmap]; }; DRR = derive2 { name="DRR"; version="0.0.3"; sha256="1yd1fvllfkcrwg9v322n4wkk4q4q84nvy58y4vac9pdr3yf3i4vl"; depends=[CVST kernlab Matrix]; }; DRaWR = derive2 { name="DRaWR"; version="1.0.1"; sha256="1pfdczwzd236c64yw94bgbk0hbl4dhlgjfjwkljmqgqrzsddvgqh"; depends=[Matrix ROCR]; }; - DSAIDE = derive2 { name="DSAIDE"; version="0.6.0"; sha256="0jg5shgq1f9k0fcpzkpynd87xfcj8ky09xsz8n8yfvy4fw8d77kl"; depends=[adaptivetau deSolve knitr shiny]; }; + DSAIDE = derive2 { name="DSAIDE"; version="0.7.0"; sha256="0n99d9ry5svp3fpvkzv3z6mfwlnzd7grf4yrsmn6cpw9m2cmy5yz"; depends=[adaptivetau deSolve dplyr ggplot2 gridExtra knitr rmarkdown shiny tidyr XML]; }; + DSAIRM = derive2 { name="DSAIRM"; version="0.4.0"; sha256="1jr4nxhb5b5a7snpi6j1kzd1lfvjm88s9zgx20m2sz37jw1lrsmd"; depends=[adaptivetau boot deSolve dplyr ggplot2 gridExtra knitr lhs nloptr rmarkdown shiny tidyr XML]; }; DSBayes = derive2 { name="DSBayes"; version="1.1"; sha256="0iv4l11dww45qg8x6xcf82f9rcz8bcb9w1mj7c7ha9glv5sfb25v"; depends=[BB]; }; DSL = derive2 { name="DSL"; version="0.1-6"; sha256="0fmqxladifqqcs4mpb8a1az74fyb4gb8l2y5gzqaad3dbiz82qih"; depends=[]; }; DSpat = derive2 { name="DSpat"; version="0.1.6"; sha256="1v6dahrp8q7fx0yrwgh6lk3ll2l8lzy146r28vkhz08ab8hiw431"; depends=[mgcv RandomFields rgeos sp spatstat]; }; @@ -841,7 +875,8 @@ in with self; { DTR = derive2 { name="DTR"; version="1.7"; sha256="1lzvk9ar6xf3n2vvy8vb9mvrbx3nafzzhvz5g7vf79jd71yz54jd"; depends=[aod ggplot2 survival]; }; DTRlearn = derive2 { name="DTRlearn"; version="1.3"; sha256="0ngzvjlzn20pff1ihw87nar7riiva4pnfih7hlsr0iszd3v3b1gq"; depends=[ggplot2 glmnet kernlab MASS]; }; DTRreg = derive2 { name="DTRreg"; version="1.3"; sha256="1144kcqblyrpdqyj9as6y47iq3x99bf76hdw6j43cmgcs11gapc3"; depends=[]; }; - DTWBI = derive2 { name="DTWBI"; version="1.0"; sha256="001lkjk8dh6mdcysc8mw9c37xp543hjfci0k0py44z7c90b9p2la"; depends=[dtw e1071 entropy lsa rlist]; }; + DTWBI = derive2 { name="DTWBI"; version="1.1"; sha256="06lp4yc5nhacrgic78l014g2w1ibwgs8dp8zrahk5aripaczl25y"; depends=[dtw e1071 entropy lsa rlist]; }; + DTWUMI = derive2 { name="DTWUMI"; version="1.0"; sha256="0pybgbfs2yp2ljbs0kra5z70x3llkiwdngp6cadgs3j9rar4vq4q"; depends=[dtw DTWBI e1071 entropy lsa rlist]; }; DVHmetrics = derive2 { name="DVHmetrics"; version="0.3.7"; sha256="1syxw49pzh36nfq0zfr83cwpac86fnj0b7nlqiin4jb00h8vrf6i"; depends=[ggplot2 KernSmooth markdown reshape2 shiny]; }; DWDLargeR = derive2 { name="DWDLargeR"; version="0.1-0"; sha256="1bxdvgj38xv2xj98njpyhy12b54nccwnc3v92kkpd3i7nwbw48dy"; depends=[Matrix SparseM]; }; DWLasso = derive2 { name="DWLasso"; version="1.1"; sha256="1i8j8wjfvg69ldr8ahz1zv3m2wgxd701iph94ad22zs9qwqfg16z"; depends=[glmnet hglasso Matrix]; }; @@ -858,14 +893,18 @@ in with self; { DataClean = derive2 { name="DataClean"; version="1.0"; sha256="0wkafjyp6c2mx7g1bpz2pbxyl5nm2wba2hly8miizv0fdc762za5"; depends=[xlsx XML]; }; DataCombine = derive2 { name="DataCombine"; version="0.2.21"; sha256="0iwb4726bk0cjhay694dp43b1553yyk9lpxbncs85kz229b26arm"; depends=[data_table dplyr]; }; DataEntry = derive2 { name="DataEntry"; version="0.9-3"; sha256="0gfsg7wfwy88x7y1dwpgwi6fkizjnhrzj0a5ij70y4a4sjmyiy55"; depends=[digest gWidgets2 gWidgets2RGtk2 RGtk2]; }; - DataExplorer = derive2 { name="DataExplorer"; version="0.6.0"; sha256="1vwihlslrcwca3q15hxpa9kvajv0clz7scqycaxhxk9ngdwcqh10"; depends=[data_table ggplot2 gridExtra networkD3 reshape2 rmarkdown scales]; }; + DataExplorer = derive2 { name="DataExplorer"; version="0.7.0"; sha256="0mhynbsiamcxd208pr75n23ccd5sajlry2c3rl0yxyv7wn6axkyj"; depends=[data_table ggplot2 gridExtra networkD3 reshape2 rmarkdown scales]; }; DataGraph = derive2 { name="DataGraph"; version="1.0.1"; sha256="0rvysvkcs926jzhp7iz9d5np0pa31y825ajn9yyzhbdfk5dg2wry"; depends=[Rcpp]; }; DataLoader = derive2 { name="DataLoader"; version="1.3"; sha256="18mih6mb95v5xjvmqwby2mma74fcxwyqdm5w8j3bhi4iwgfn6d7v"; depends=[plyr rChoiceDialogs readxl xlsx]; }; - DataVisualizations = derive2 { name="DataVisualizations"; version="1.1.1"; sha256="1y38q1rw92qzsl22663v730i9c1mlyyw9pb167f8f81snb0x9fda"; depends=[AdaptGauss ggplot2 magrittr Rcpp RcppArmadillo sp]; }; - DatabaseConnector = derive2 { name="DatabaseConnector"; version="2.1.3"; sha256="00dd9m7qf97ymrjjklg4a0j93wcn6mrmvg7spywm524nickcd4f6"; depends=[bit DatabaseConnectorJars DBI ff ffbase rJava SqlRender urltools]; }; + DataPackageR = derive2 { name="DataPackageR"; version="0.15.4"; sha256="1q9n0684hi1y87zq25274s2kgdk7slsb2nchww36yy45vlzi3jsn"; depends=[assertthat crayon desc devtools digest futile_logger knitr purrr rmarkdown roxygen2 rprojroot stringr usethis yaml]; }; + DataVisualizations = derive2 { name="DataVisualizations"; version="1.1.4"; sha256="0q6pz9j6js5q8mma6d1vl4wngk5zzmfq0hssrh2pk2brnm6958mj"; depends=[AdaptGauss ggplot2 Rcpp RcppArmadillo sp]; }; + DatabaseConnector = derive2 { name="DatabaseConnector"; version="2.2.0"; sha256="0y6si8sci70fskkznx7xg5wk488hcpdfm4193b9i5nbsq6mnn8a6"; depends=[bit DatabaseConnectorJars DBI ff ffbase rJava SqlRender urltools]; }; DatabaseConnectorJars = derive2 { name="DatabaseConnectorJars"; version="1.0.0"; sha256="1m739q9x5w2xcwx19qm633z6xfijqdgcdvfjj6c5jhn66hc401nq"; depends=[rJava]; }; DatabionicSwarm = derive2 { name="DatabionicSwarm"; version="1.1.0"; sha256="19in7n2fs5m965wf37mplsafiqrmgv1lcyhf7rlk4wvq4y2gvic6"; depends=[deldir GeneralizedUmatrix Rcpp RcppArmadillo]; }; Davies = derive2 { name="Davies"; version="1.1-9"; sha256="19n2szki2dc8z01zh5a7bq4scgisnpd2qqbiimgrswjrykgh2fpm"; depends=[]; }; + DeLorean = derive2 { name="DeLorean"; version="1.5.0"; sha256="1ry6j4mvxms9hddi9c56p9yhjh66fzss41wqkf6xq398h1wbn4q1"; depends=[BH broom coda dplyr fastICA functional ggplot2 kernlab lattice MASS memoise Rcpp RcppEigen reshape2 rstan rstantools seriation StanHeaders stringr]; }; + DecisionAnalysis = derive2 { name="DecisionAnalysis"; version="0.1.0"; sha256="1pxsvwl1in822ml7spb4flln2l7kzavq0jhxxsgxcrljypvrva61"; depends=[Cairo data_tree dplyr ggplot2 gridExtra tidyr viridisLite]; }; + DeclareDesign = derive2 { name="DeclareDesign"; version="0.10.0"; sha256="1vp9sp7sqpzdglaqiniz39wgz3ib2h45kqrxkfgdrnsiz14ksmjw"; depends=[estimatr fabricatr randomizr rlang]; }; DecorateR = derive2 { name="DecorateR"; version="0.1.1"; sha256="1dvyadlksqv8ns043yh91f6kw162k6r0zwn13j1g6pvismw04br9"; depends=[rJava RWeka RWekajars]; }; Deducer = derive2 { name="Deducer"; version="0.7-9"; sha256="14kakyf28i654pndlswjzp6h3h7szpznrg6xznqg150mmn0bs3s6"; depends=[car e1071 effects foreign ggplot2 JGR MASS multcomp plyr rJava scales]; }; DeducerExtras = derive2 { name="DeducerExtras"; version="1.7"; sha256="0sngsq31469a74y7nhskl82fwy2i0ga68m9g6b1xyhxz1a8kgvlg"; depends=[Deducer irr rJava]; }; @@ -876,31 +915,33 @@ in with self; { DeducerText = derive2 { name="DeducerText"; version="0.1-2"; sha256="0if2p9j74wa5rva4iv0i8iax22grl9j7lqcqzqlywjgqwnlzxa05"; depends=[Deducer RColorBrewer SnowballC tm wordcloud]; }; Delaporte = derive2 { name="Delaporte"; version="6.2.0"; sha256="0lhi4gfps00c9psr8kk7zzh7ky4y7xi2va303darxq9j6v509qck"; depends=[]; }; DelayedEffect_Design = derive2 { name="DelayedEffect.Design"; version="0.0.4"; sha256="0n1dw9bqisfarg7him49mzqn60gcfr660d5x9k6b37r12dnmy48v"; depends=[msm survival]; }; - Delta = derive2 { name="Delta"; version="0.1.1.11"; sha256="1fi5sgyrf86xmfxhglqxcc0hq5mpc8ar3nk2s4wx3rw4if3sdxdz"; depends=[]; }; + Delta = derive2 { name="Delta"; version="0.2.0.2"; sha256="00yl7rildggcv5zlis6idzjkfvz6x99c29vrra1w8l11klxnjpdy"; depends=[]; }; Demerelate = derive2 { name="Demerelate"; version="0.9-3"; sha256="1bsf09di6nh0hznqx829jnbn3092rya03hnc82cns6rm8d3bn0a9"; depends=[fts mlogit sfsmisc vegan]; }; + DemoDecomp = derive2 { name="DemoDecomp"; version="1.0.1"; sha256="0m24ld8s3ph8qcbkqma5y5k5nv0d0vgb7wz8q20gxnfbj2kbcvjv"; depends=[Rdpack]; }; DendSer = derive2 { name="DendSer"; version="1.0.1"; sha256="0id6pqx54zjg5bcc7qbxiigx3wyic771xn9n0hbm7yhybz6p3gz9"; depends=[gclus seriation]; }; - DendroSync = derive2 { name="DendroSync"; version="0.1.1"; sha256="0lizdkd5izqn3n4iqcj6gyc2p2c3ajljfhv5js4wfl2fljs46wkg"; depends=[ggplot2 gridExtra nlme]; }; + DendroSync = derive2 { name="DendroSync"; version="0.1.2"; sha256="007lmdwnk6qll13965667fn2a0lfnc85msp0wrgm25gi011z8x37"; depends=[ggplot2 gridExtra nlme]; }; DengueRT = derive2 { name="DengueRT"; version="1.0.1"; sha256="11qfg4l6y3j8qh4dcsz13xjjj1n0q71c9a3c180nm5lgqv0nwb81"; depends=[drc ggplot2 nlme]; }; - DensParcorr = derive2 { name="DensParcorr"; version="1.0"; sha256="15w0ifcq1js0wyjscfhlbga77sgzqpmz7zmwa77y92iwna8q66ad"; depends=[clime gplots]; }; + DensParcorr = derive2 { name="DensParcorr"; version="1.1"; sha256="1ifkg7cpimf27yhr60rks77r16kmhwa5h10wv7b64sbfncnyzfmj"; depends=[clime gplots]; }; Density_T_HoldOut = derive2 { name="Density.T.HoldOut"; version="2.00"; sha256="0kh5nns1kqyiqqfsgvxhx774i2mf4gcim8fp5jjyq577x4679r31"; depends=[histogram]; }; - DepthProc = derive2 { name="DepthProc"; version="2.0.3"; sha256="0zzbk0vbl2qfwr5j203xpzahf6kl0ya4l7xfjdc6diadfnr0w94y"; depends=[colorspace geometry ggplot2 lattice MASS np Rcpp RcppArmadillo rrcov sm zoo]; }; + DepthProc = derive2 { name="DepthProc"; version="2.0.4"; sha256="1dh159pvvn2hbjydb9ys8ndblpzpyg72g2hfiqrdi3bkz865xvg5"; depends=[colorspace geometry ggplot2 lattice MASS np Rcpp RcppArmadillo rrcov sm zoo]; }; Deriv = derive2 { name="Deriv"; version="3.8.5"; sha256="0815ws2zmla3ici1n8amkc8fz8lwpbg5z68m8j3nhc79m2ikvm20"; depends=[]; }; - DescTools = derive2 { name="DescTools"; version="0.99.24"; sha256="1ns0vqpnfj995dq1l6pmah2wi6l8zacndha6brhy97hyn84mc83k"; depends=[BH boot expm foreign manipulate MASS mvtnorm Rcpp]; }; + DescTools = derive2 { name="DescTools"; version="0.99.25"; sha256="0bk2za3zx9xfxaiz7ax2n9592v4nvb7lwxw68g4vxvxlyrmi178c"; depends=[BH boot expm foreign manipulate MASS mvtnorm Rcpp]; }; DescToolsAddIns = derive2 { name="DescToolsAddIns"; version="1.0"; sha256="1qyxbnmr2dycyfivdyvdqcbpk993q9glrixgp64pflx3sqz91yyk"; depends=[DescTools rstudioapi]; }; - DescribeDisplay = derive2 { name="DescribeDisplay"; version="0.2.5"; sha256="02b6yjgklsdjh3rikc8f5wfx08ymbygr3fyq1c134xhffhykrlgp"; depends=[GGally ggplot2 plyr reshape2 scales]; }; + DescribeDisplay = derive2 { name="DescribeDisplay"; version="0.2.7"; sha256="0241mbz0y3ala7fsb4fwjd0xigsk0wq77hfrjyvnnp97rfjfzmcv"; depends=[GGally ggplot2 plyr reshape2 scales]; }; DescriptiveStats_OBeu = derive2 { name="DescriptiveStats.OBeu"; version="1.3.0"; sha256="1cgxnsxivsqchzqywv470q9qwxczmcvwhrr51m70mcbzmib4mxw3"; depends=[curl dplyr jsonlite magrittr RCurl reshape]; }; + DesignLibrary = derive2 { name="DesignLibrary"; version="0.1.1"; sha256="1ykzriq1h2i0fmbdsbscy093j4bbsxdvbx94yqcrxz9zflzzmk36"; depends=[DeclareDesign estimatr fabricatr randomizr rlang]; }; DetMCD = derive2 { name="DetMCD"; version="0.0.5"; sha256="034wb5hwpikli6h2rwiqr19qvzxrr4qwi4q436y7c5a5wgkfzgl5"; depends=[pcaPP Rcpp RcppEigen robustbase]; }; DetR = derive2 { name="DetR"; version="0.0.5"; sha256="1dd4nzkgj5pl9397aa0z3q5fpl27xbdf7q0pqbs821dyynylxzn9"; depends=[MASS pcaPP Rcpp RcppEigen robustbase]; }; DetSel = derive2 { name="DetSel"; version="1.0.2"; sha256="0igkccclmjwzk7sl414zlhiykym0qwaz5p76wf4i7yrpjgk7mhl9"; depends=[ash]; }; Devore7 = derive2 { name="Devore7"; version="0.7.6"; sha256="1m18p8h9vv4v0aq2fkjyj39vzb8a09azbbczhfiv4y88w540i8nw"; depends=[lattice MASS]; }; Dforest = derive2 { name="Dforest"; version="0.4.2"; sha256="19jyph2zqfyq9vv22kb6fqy89l0vcviv19zgk10hbd7q850f6ryn"; depends=[ggplot2 rpart]; }; - DiPhiSeq = derive2 { name="DiPhiSeq"; version="0.1.0"; sha256="02kk0qqi9skb2pszfsgasa9fj7iz1brwxgwcw1dq9gf5hxr9zra4"; depends=[]; }; + DiPhiSeq = derive2 { name="DiPhiSeq"; version="0.2.0"; sha256="11l2inf99vxz9k292307j8c2b25kc1066svy3vxrfl72rrm4fqa7"; depends=[]; }; DiagrammeR = derive2 { name="DiagrammeR"; version="1.0.0"; sha256="0zik8j50yfxgzdv2cf6q80kw8nb5y55l9sbrp60qc08r3fp6s61b"; depends=[downloader dplyr glue htmltools htmlwidgets igraph influenceR magrittr purrr RColorBrewer readr rgexf rlang rstudioapi scales stringr tibble tidyr viridis visNetwork]; }; DiagrammeRsvg = derive2 { name="DiagrammeRsvg"; version="0.1"; sha256="0j2cm1mx3zrb2k3pcrb96z2z3kws61gyyjsjjv5rqcb5lzdgi65k"; depends=[V8]; }; DiallelAnalysisR = derive2 { name="DiallelAnalysisR"; version="0.1.1"; sha256="1diwzckn0f2dv0vj2mdzy7k3md6j472xzj82ip23adwr27vlfsi3"; depends=[ggplot2]; }; DiceDesign = derive2 { name="DiceDesign"; version="1.7"; sha256="05bmscy275077kmbmg75npnmw30kd5x5wmlizcfq771zixby3f7h"; depends=[]; }; DiceEval = derive2 { name="DiceEval"; version="1.4"; sha256="06p3v161ig714k7z59iji64xhxw1a68kqhnlwhwpjpyrx7kn137b"; depends=[DiceKriging]; }; - DiceKriging = derive2 { name="DiceKriging"; version="1.5.5"; sha256="035kbk633v4kfb44wiyb556sayl73c24fc1w09r3f33shqgidzjm"; depends=[]; }; + DiceKriging = derive2 { name="DiceKriging"; version="1.5.6"; sha256="14jfwvj8vhrngcpkqdzr6klhnqwgr1g5wm5rqz8q6w7ip4nnsii5"; depends=[]; }; DiceOptim = derive2 { name="DiceOptim"; version="2.0"; sha256="1hx4379yb6d36c494qc237vld4jnfxq18m994p5ii9ks6s7amifn"; depends=[DiceDesign DiceKriging mnormt pbivnorm randtoolbox rgenoud]; }; DiceView = derive2 { name="DiceView"; version="1.3-2"; sha256="0ny9gbaycrq3lr4gqil1yyhkkyxmabl8w6cmkkzlx3yaara0idkf"; depends=[DiceEval DiceKriging rgl]; }; DidacticBoost = derive2 { name="DidacticBoost"; version="0.1.1"; sha256="0z1h61n6nfjvb64fgkzi1sq7ag747crhh593hxkx0cpza29778rz"; depends=[rpart]; }; @@ -914,10 +955,11 @@ in with self; { DirectEffects = derive2 { name="DirectEffects"; version="0.1"; sha256="0c9inxn624c5rxa86d8r8jhsrm42rcsm4xxrwg7h3lvpairiyil2"; depends=[Formula]; }; DirectStandardisation = derive2 { name="DirectStandardisation"; version="1.2"; sha256="060nscnn7wamnbb45a55wr6rirlbpwwjz0kxiw3aiqkm16ilzfbs"; depends=[]; }; DirectedClustering = derive2 { name="DirectedClustering"; version="0.1.1"; sha256="1shdqz0c5bbgknvfqr3ais26cb5mpywnah3d3584w97sy8v7gxm2"; depends=[igraph]; }; - Directional = derive2 { name="Directional"; version="3.2"; sha256="0wjlkaq6wwpfllyk9qjmpap3vy0yxgbd12yz4nmmf51fnpqv75a6"; depends=[doParallel foreach MASS RcppZiggurat Rfast]; }; + Directional = derive2 { name="Directional"; version="3.3"; sha256="17cf2nrx9kxyrmsg443bnh2dfw0351ab4g0xl5bm7ldbiffqm7sp"; depends=[doParallel foreach MASS RcppZiggurat Rfast]; }; DirichletReg = derive2 { name="DirichletReg"; version="0.6-3"; sha256="0qvnsbyn3livp5jrnxskf5sf7f2svy5mqkmnhzncb9bwf3kxpyla"; depends=[Formula maxLik rgl]; }; DisHet = derive2 { name="DisHet"; version="1.0.0"; sha256="056jcs1qpiyadnmlzd0cj4kp0qzkichxi0pdnxypyq1fsqnpvan3"; depends=[gtools matrixStats]; }; - DisImpact = derive2 { name="DisImpact"; version="0.0.2"; sha256="0rn92vdxll4r20q0ybqrd3sdpa1bsg9zmbb98zmllfvmh2fgj6a1"; depends=[dplyr magrittr rlang]; }; + DisImpact = derive2 { name="DisImpact"; version="0.0.3"; sha256="1xmbwhbhb2jyzar8am77zma7l5siyhzna6l69y2068lqrk7l5w32"; depends=[dplyr magrittr rlang]; }; + DiscreteFDR = derive2 { name="DiscreteFDR"; version="1.1"; sha256="0flirs7m2a8igkf0qvr99i882k886iry8wjzsb2l4zp0f1piwjyy"; depends=[]; }; DiscreteInverseWeibull = derive2 { name="DiscreteInverseWeibull"; version="1.0.2"; sha256="0vjsvl4m4zccfgizv7mzidbbpzqcm101x448vllcdcrn2xlnkmnq"; depends=[Rsolnp]; }; DiscreteLaplace = derive2 { name="DiscreteLaplace"; version="1.1.1"; sha256="17w4vjvsm7jacvwckjczyah3hglq044r3m6vqdcrg8haz884rav2"; depends=[]; }; DiscreteWeibull = derive2 { name="DiscreteWeibull"; version="1.1"; sha256="1rg3ax6jryagf5d3h8m44x9wyhr2qff3srfa9zrk6i64p1ahk9lr"; depends=[Rsolnp]; }; @@ -930,7 +972,7 @@ in with self; { DiversityOccupancy = derive2 { name="DiversityOccupancy"; version="1.0.6"; sha256="16x3fpchgd12mccvr1k11vjka97sy5vjvjcyd5y3pskgnpycc2sv"; depends=[dplyr ggplot2 glmulti MuMIn qpcR raster unmarked vegan]; }; DnE = derive2 { name="DnE"; version="2.1.0"; sha256="02cbfb3m9xf24wkgqc06k3k0rx7qlqh4ma43khg6fpvif6yyahrn"; depends=[]; }; DoE_MIParray = derive2 { name="DoE.MIParray"; version="0.11"; sha256="0plwvji2rrxmjnf61mj1ijglc9z62n26ijqsf65s35c19qv2g0y1"; depends=[DoE_base]; }; - DoE_base = derive2 { name="DoE.base"; version="1.0"; sha256="01h2slkrc4vzmz54vilv6qkgfz0f9jhq3bb684rl7cx55smhzr68"; depends=[combinat conf_design lattice MASS numbers vcd]; }; + DoE_base = derive2 { name="DoE.base"; version="1.1-1"; sha256="1py9ml1gdibjqklqw2gzrppkgcpp2418sxdbg7ciw9vkwivwbrsn"; depends=[combinat conf_design lattice MASS numbers partitions vcd]; }; DoE_wrapper = derive2 { name="DoE.wrapper"; version="0.9"; sha256="0l4dxb0f4ql5k3x1avfzs1w54qwjxfp8rl9h9vg6p1zhbkz4qz06"; depends=[AlgDesign DiceDesign DoE_base FrF2 lhs rsm]; }; DoEstRare = derive2 { name="DoEstRare"; version="0.2"; sha256="0y9ymw7114jk1rwiasq400bpgvkxv6rpc954c7v9mgxd3c2nfza7"; depends=[]; }; DoTC = derive2 { name="DoTC"; version="0.2"; sha256="1hjjkmxrbiysy3xl6n4q7kxcygdq68jcsgki1p937zj9a17sa62j"; depends=[ggplot2 plyr]; }; @@ -947,7 +989,7 @@ in with self; { DrillR = derive2 { name="DrillR"; version="0.1"; sha256="0n7pim5kk0wfdjcc67v4vvdb7wyhn5bcgi2a12nbyfyydss7pk1g"; depends=[httr]; }; DrugClust = derive2 { name="DrugClust"; version="0.2"; sha256="0acvjqwzkbjmy101m501l7fkfxzkp6zflwvn56li5307xv9ggnfg"; depends=[cclust cluster e1071 MESS ROCR]; }; DstarM = derive2 { name="DstarM"; version="0.3.0"; sha256="16vcv21dgnymhsy9j5x5pblnipf4hdyscajx6pr8kl6i95hs3hmj"; depends=[DEoptim ggplot2 Rcpp RcppArmadillo rtdists RWiener]; }; - DtD = derive2 { name="DtD"; version="0.1.0"; sha256="1alkgd2rpjrg1sl1l22qsr5b5d3i4scvfxijhffxb0897yvg71ri"; depends=[checkmate Rcpp RcppArmadillo]; }; + DtD = derive2 { name="DtD"; version="0.2.0"; sha256="0s6prl8rmpjmsv94ww3pvks11nw716gf7250jyynharvqd9q9aps"; depends=[checkmate Rcpp RcppArmadillo]; }; DunnettTests = derive2 { name="DunnettTests"; version="2.0"; sha256="1sf0bdxays10n8jh2qy85fv7p593x58d4pas9dwlvvah0bddhggg"; depends=[mvtnorm]; }; DySeq = derive2 { name="DySeq"; version="0.22"; sha256="1sx6mg0bcqb5ff6x305k43zx3fwd16rvxc7xb3ai5h3w7fs9zz7y"; depends=[boot MASS TraMineR]; }; Dykstra = derive2 { name="Dykstra"; version="1.0-0"; sha256="1rc1409ky0ysqr3ccq28yhbs94m6d0z2dfa66k4c7irxjvbagwz6"; depends=[]; }; @@ -955,7 +997,7 @@ in with self; { DynNom = derive2 { name="DynNom"; version="4.1.1"; sha256="1c4hykp8fwr6h5y09m4qs23bmbaj6im2c833mv2ymlhy5bwhmnfi"; depends=[BBmisc compare ggplot2 plotly rms shiny stargazer survival]; }; DynTxRegime = derive2 { name="DynTxRegime"; version="3.2"; sha256="0a6s28vc7kf6r7qmy9xjmxm39fl0ijnbl01d8rzr4w9sbnr3n85l"; depends=[dfoptim kernlab modelObj rgenoud]; }; DynamicDistribution = derive2 { name="DynamicDistribution"; version="1.1"; sha256="1s78hpj2pxjs4vixin1i816qjbn3wk7b8rd2zdjp4d4rbxifcqf5"; depends=[]; }; - DynamicGP = derive2 { name="DynamicGP"; version="1.0-2"; sha256="1mgipnkf8mlxcr9b6naiy5nq90war1gdp2cm54681b4cx0fv62p2"; depends=[laGP lhs]; }; + DynamicGP = derive2 { name="DynamicGP"; version="1.1-1"; sha256="14xmsxvzl4jri6727qj7mzs1smlqm1hgq03v5r624dqkkmfbdxkv"; depends=[lhs]; }; EAinference = derive2 { name="EAinference"; version="0.2.3"; sha256="1kzcfya3z6rf1vqjn72yjymdhrn4dzgmwifh3w6k22cy5jxffzn4"; depends=[hdi limSolve MASS msm mvtnorm Rcpp RcppArmadillo]; }; EBASS = derive2 { name="EBASS"; version="0.1"; sha256="14hxzj06wrc4ihflr7dqk28fsjwbcizr0jy54vhv0mk1y1gd4201"; depends=[]; }; EBEN = derive2 { name="EBEN"; version="4.6"; sha256="0gcf5b2viiq69vs8bd8nhk65g9sbzgg212w7zpnz4y6cv9jkk5zz"; depends=[]; }; @@ -963,6 +1005,7 @@ in with self; { EBglmnet = derive2 { name="EBglmnet"; version="4.1"; sha256="0wlscmimj74alcr8k5h1g3alvlpss4g2ah7zkpd42akam3zb4s5z"; depends=[]; }; EBrank = derive2 { name="EBrank"; version="1.0.0"; sha256="1qzhrr3n2zv31mjp224b35324nr9nigzazyfv11j4zhwl1ipf632"; depends=[]; }; ECFsup = derive2 { name="ECFsup"; version="0.1-2"; sha256="0fpcab0gjgsc3sx0plpx068rw3a7kfzs2nyrr477a5m0rcbqf1kh"; depends=[foreach Rcpp RcppArmadillo]; }; + ECLRMC = derive2 { name="ECLRMC"; version="1.0"; sha256="01z2hmbpb754s2rsvx3i5wf7kkkr2mvs2g89ih2bqrif7w5rmgyg"; depends=[softImpute]; }; ECOSolveR = derive2 { name="ECOSolveR"; version="0.4"; sha256="14dpja9wr1qqip388c8b6xvdvdpwwmyq5piv182ir0rwrla5nzdb"; depends=[Matrix]; }; ECctmc = derive2 { name="ECctmc"; version="0.2.5"; sha256="0prryvc17bm1xrhzlqk2w9nj181bg99j1dph3d36h0n1vfq1d7if"; depends=[Rcpp RcppArmadillo]; }; ECharts2Shiny = derive2 { name="ECharts2Shiny"; version="0.2.13"; sha256="0dq8ja4ydxnc7qx35qhh9ryqgi7ambwz6ka2821mmq3p994crswn"; depends=[jsonlite shiny]; }; @@ -973,20 +1016,22 @@ in with self; { EDMeasure = derive2 { name="EDMeasure"; version="1.2.0"; sha256="1gyv86vip0a3939dbbwz29xkqzncw24r68fzykdjnv3b995510iv"; depends=[dHSIC energy rBayesianOptimization]; }; EDR = derive2 { name="EDR"; version="0.6-6"; sha256="10m92p3fy5z2kca4h9awwmvs4pqri92habkvgjvjl5ira09yvyi7"; depends=[sm]; }; EEM = derive2 { name="EEM"; version="1.1.1"; sha256="0w20kakgcpyhfi7fcrss4w67pbaj87hi2scy7g05q3sg2ygac7gj"; depends=[colorRamps ggplot2 R_utils reshape2 sp]; }; - EFAutilities = derive2 { name="EFAutilities"; version="1.2.2"; sha256="1gknnfyhv16a16wgach0ps9wd08d75bach4p80vjq6ld9fjvpw2h"; depends=[GPArotation mvtnorm plyr]; }; + EFAutilities = derive2 { name="EFAutilities"; version="1.2.3"; sha256="1r2ma22r1bs5yn0k4c4p2ks571vp6bzmr4wsd25w535k5qfjx2np"; depends=[GPArotation mvtnorm plyr]; }; EFDR = derive2 { name="EFDR"; version="0.1.1"; sha256="0jgznwrd40g9xmvhrd7b441g79x41ppfdn6vbsbzc0k5ym1wzb1p"; depends=[doParallel dplyr foreach gstat Matrix sp tidyr waveslim]; }; EFS = derive2 { name="EFS"; version="1.0.3"; sha256="1q8cf8dnxpv5s3lr9145y0wjhak4rz18dzah4xfs5qr4c8nlpl54"; depends=[party pROC randomForest ROCR]; }; - EGRET = derive2 { name="EGRET"; version="2.6.0"; sha256="0alr47pmq1ml64j500vkqwmvrqa3i1ccbf3w7w44fbbjy1vfp04a"; depends=[dataRetrieval fields lubridate survival truncnorm]; }; - EGRETci = derive2 { name="EGRETci"; version="1.0.2"; sha256="15jf4bgxvqqz64y4i6ncfj0ymgwmhahxlhdnfps4zj7gwxgcbvqh"; depends=[binom EGRET lubridate]; }; + EGRET = derive2 { name="EGRET"; version="3.0.0"; sha256="1zl93cf8wmbxc095bsw0ngsfalgrydgn3mvnsnpzg3bp18idvwsw"; depends=[dataRetrieval fields foreach survival truncnorm]; }; + EGRETci = derive2 { name="EGRETci"; version="2.0.0"; sha256="1jndrkg3wn46d2fxb6l4f77v65vvq0ir91zr3iyh01lhlksnf33j"; depends=[binom EGRET]; }; EHR = derive2 { name="EHR"; version="0.1-3"; sha256="1y12j0sjr1zp3bzha1p31f903js674l6ifjccw0y9718sry8dbv2"; depends=[logistf]; }; EIAdata = derive2 { name="EIAdata"; version="0.0.3"; sha256="12jgw3vi2fminwa4lszczdr4j4svn2k024462sgj1sn07a4a4z2s"; depends=[plyr XML xts zoo]; }; EILA = derive2 { name="EILA"; version="0.1-2"; sha256="0wxl9k4fa0f7jadw3lvn97iwy7n2d02m8wvm9slnhr2n8r8sx3hb"; depends=[class quantreg]; }; EKMCMC = derive2 { name="EKMCMC"; version="0.1.0"; sha256="0sfj6w8780fik0ar9bg8zrxkj10wqagvwrngd58g50fc0z4lhr53"; depends=[numDeriv]; }; EL = derive2 { name="EL"; version="1.0"; sha256="13r7vjy2608h8jph8kwy69rnkg98b2v69117nrl728r3ayc46a18"; depends=[]; }; - EL2Surv = derive2 { name="EL2Surv"; version="1.0"; sha256="1vrm0w9rmy4vfkpzq804p216cxw4vvp91g77k4vvzv4z87gkqfhq"; depends=[survival]; }; + EL2Surv = derive2 { name="EL2Surv"; version="1.1"; sha256="0bn2481rf61qnia468y7k95hhazjaghrv919a2y9ar5wcz5nq2kk"; depends=[survival]; }; ELMR = derive2 { name="ELMR"; version="1.0"; sha256="0pd3drv485xbdyfwm28kjpd0nd0zv1khfwzki1gh5p1gz9ndwr2x"; depends=[]; }; + ELMSO = derive2 { name="ELMSO"; version="1.0.0"; sha256="0bsqx2630m817hi5p0rz8cfp5gyzqxyrysba5nm189h556k4c3a4"; depends=[]; }; ELT = derive2 { name="ELT"; version="1.6"; sha256="0vbrf912m6f80sqyyrp0z4jhq38fnmcy6hgwy0qh8wgk3p1aqm7c"; depends=[lattice latticeExtra locfit xlsx]; }; - ELYP = derive2 { name="ELYP"; version="0.7-3"; sha256="1d91r59m85k91kcjjlvhvbsa9855fyd702bwj7drvk36ssfr8qb9"; depends=[survival]; }; + ELYP = derive2 { name="ELYP"; version="0.7-5"; sha256="1j2vwcs443x3pf4zypyvbkn8fb5if9b9hf1s821jjjpgach573sc"; depends=[survival]; }; + EM_Fuzzy = derive2 { name="EM.Fuzzy"; version="1.0"; sha256="0sz4zkjn6rdzdqmkq6j24bd4sj91y5lan31bldxdfskgz0jpzhbr"; depends=[DISTRIB FuzzyNumbers]; }; EMA = derive2 { name="EMA"; version="1.4.5"; sha256="16iq5a3yrilchqmkyb4g5bmmgpw6psm88n52gmlax75xbiwk8261"; depends=[affy AnnotationDbi Biobase biomaRt cluster FactoMineR gcrma GSA heatmap_plus MASS multtest siggenes survival xtable]; }; EMAtools = derive2 { name="EMAtools"; version="0.1.3"; sha256="1kzna29kd6s2hgli5azrfz85mbyl1x6knvhhhny2scf7a1fcijsy"; depends=[DataCombine ggplot2 lmerTest sjstats]; }; EMC = derive2 { name="EMC"; version="1.3"; sha256="0sdpxf229z3j67mr9s7z4adzvvphgvynna09xkkpdj21mpml23p6"; depends=[MASS mvtnorm]; }; @@ -996,23 +1041,25 @@ in with self; { EMMAgeo = derive2 { name="EMMAgeo"; version="0.9.4"; sha256="1i36s8mzp04alff6lqkc798xjzgn61wdpl5i0awjdvg26ka8v7lj"; depends=[GPArotation limSolve shape shiny]; }; EMMIXcskew = derive2 { name="EMMIXcskew"; version="0.9-5"; sha256="1ys5kvns6jlw2lk9m6xcy71wx1d581cmphiaxnp3hsqimc8wz7hq"; depends=[MASS mnormt rgl]; }; EMMIXgene = derive2 { name="EMMIXgene"; version="0.1.0"; sha256="1jadasvngxczyyc7gxpcw3jxhxai3p88l8lmj1jmdns5vdi2n4rl"; depends=[BH ggplot2 mclust Rcpp RcppArmadillo reshape scales]; }; + EMMIXmfa = derive2 { name="EMMIXmfa"; version="2.0.7"; sha256="178j76acdksajnh65l60l94zd4l8s3xmrj2am1h4i5g3jmmrj16i"; depends=[]; }; EMMIXskew = derive2 { name="EMMIXskew"; version="1.0.3"; sha256="05y1ivbzbsfab90925l3ahzd3b8y5kjfk3f0p2s9s3sfyxphqah7"; depends=[KernSmooth lattice mvtnorm]; }; EMMIXuskew = derive2 { name="EMMIXuskew"; version="0.11-6"; sha256="0japf0l0sj84jna7b5kirp6pgqa4c923ldwphb16ch2xxrgk5n5k"; depends=[MASS]; }; EMMLi = derive2 { name="EMMLi"; version="0.0.3"; sha256="1b36kyzvrdljmkysggv8jyaip78pj32ms0xhj2y568hd419lkh2p"; depends=[]; }; EMMREML = derive2 { name="EMMREML"; version="3.1"; sha256="0qwj4jlfhppjxwcjldh49b6idnagazrxybaid3k2c269wvxwvddq"; depends=[Matrix]; }; EMP = derive2 { name="EMP"; version="2.0.2"; sha256="0l9wyxmcl8b6jiykc4mim6npmz5wrsapk2wgxbfhg27dwdb847ha"; depends=[ROCR]; }; EMSC = derive2 { name="EMSC"; version="0.9.0"; sha256="13d915g7iyv724x35i9mr8msy5mhrpqhhva21vdinxbjdy6vdlr9"; depends=[pracma]; }; + EMSHS = derive2 { name="EMSHS"; version="1.0.0"; sha256="1lpv3243z5765b1dihqz9hc3dpw76nwy14mmd4253sw8xpy25w41"; depends=[Rdpack]; }; EMSaov = derive2 { name="EMSaov"; version="2.3"; sha256="1hpvwimhkl7za5s8j9n4a8883vy89jrxrhlh0k3cfprnndh4zz05"; depends=[shiny]; }; EMT = derive2 { name="EMT"; version="1.1"; sha256="0m3av1x3jcp3hxnzrfb128kch9gy2zlr6wpy96c5c8kgbngndmph"; depends=[]; }; EMVS = derive2 { name="EMVS"; version="1.0"; sha256="10ksrj1aav062cszg4ymnwsgib7a9hlnkksfcvmy26nx5gj2g7zl"; depends=[Rcpp RcppArmadillo]; }; EMbC = derive2 { name="EMbC"; version="2.0.1"; sha256="0id68ws6l858nvyy790m17j9gddxmm97z66x24w5r58dxi6yfcrp"; depends=[maptools mnormt RColorBrewer Rcpp RcppArmadillo sp]; }; - ENMeval = derive2 { name="ENMeval"; version="0.2.2"; sha256="1w8mjcmxxkx8lxxzzbjpv1i7cm6l8hhml7ynp80s9yiprr04bq9c"; depends=[dismo doParallel foreach raster rJava]; }; + ENMeval = derive2 { name="ENMeval"; version="0.3.0"; sha256="0q5s8nxig8kbr0cblfmf3k20ri19fjs770a0fnzsk0kwlac414hw"; depends=[dismo doParallel foreach maxnet raster]; }; ENiRG = derive2 { name="ENiRG"; version="1.0.1"; sha256="0yjy7g0pia4g18h7mawkxn77dnnqcajnbml21rrv63qwlr347355"; depends=[ade4 fgui gdata miniGUI raster rgrass7 sp]; }; ENmisc = derive2 { name="ENmisc"; version="1.2-7"; sha256="07rix4nbwx3a4p2fif4wxbm0nh0qr7wbs7nfx2fblafxfzhh6jc7"; depends=[Hmisc RColorBrewer vcd]; }; EQL = derive2 { name="EQL"; version="1.0-0"; sha256="0lxfiizkvsfls1km1zr9v980191af6qjrxwcqsa2n6ygzcb17dp5"; depends=[lattice ttutils]; }; EQUIVNONINF = derive2 { name="EQUIVNONINF"; version="1.0"; sha256="103wrry0cmikprihmgx8y4kk1pnbjis7rs1xw13w14v902xkr2rq"; depends=[BiasedUrn]; }; - ERP = derive2 { name="ERP"; version="2.0"; sha256="0y476ir8j54q20ibzpkla32wxp6yjv04ca67ry9kajq64ibflh7w"; depends=[corpcor fdrtool irlba mnormt pacman]; }; - ERSA = derive2 { name="ERSA"; version="0.1.0"; sha256="063i9fmdccyrbap7fgas9371zv13gpcgzhlsphsn8jw9nmzpdii4"; depends=[broom car combinat dplyr ggplot2 leaps modelr purrr RColorBrewer shiny tidyr]; }; + ERP = derive2 { name="ERP"; version="2.1"; sha256="0l3vgg7szfgi7a6qh93lh2sjnkwkhw02laxdl7x87jirmmsx3157"; depends=[corpcor fdrtool irlba mnormt pacman]; }; + ERSA = derive2 { name="ERSA"; version="0.1.1"; sha256="1b76rfjndw7s0z4qb6rc2s95z0hr9xn4d5qaja9bd721r0g5862k"; depends=[broom car combinat dplyr ggplot2 leaps purrr RColorBrewer shiny tidyr]; }; ES = derive2 { name="ES"; version="1.0"; sha256="1rapwf6kryr6allzbjk6wmxpj9idd3xlnh87rwbh6196xb7rp8lv"; depends=[]; }; ESEA = derive2 { name="ESEA"; version="1.0"; sha256="06r5lki32mxkznj6yxvlz0ikqcxm3jbaralv4qp9xrw6dy6yyg27"; depends=[igraph parmigene XML]; }; ESG = derive2 { name="ESG"; version="0.1"; sha256="1jw6239asv6lwxrz5v0r5pzg6v500bqxg8361sh4jj67rsrc7g9m"; depends=[]; }; @@ -1022,11 +1069,12 @@ in with self; { ETAS = derive2 { name="ETAS"; version="0.4.4"; sha256="0s0j7r1nyf82qz3lavsvyd11hl0jkq69c70wh00nfy93n2ygp376"; depends=[fields goftest lattice maps Rcpp spatstat]; }; ETC = derive2 { name="ETC"; version="1.3"; sha256="1nvb9n0my7h1kq996mk91canxi6vxy3mzhrshrvm13ixvl48lkkh"; depends=[mvtnorm]; }; ETLUtils = derive2 { name="ETLUtils"; version="1.4.1"; sha256="07wqrg7mnxmbdf2ibxj5kppl4sd3l608yfhbbsngkhpsrm203qva"; depends=[bit ff]; }; - EValue = derive2 { name="EValue"; version="1.1.4"; sha256="09b66sck5r2ysjxpjhwgjcapx6wj1jg3v56b0x48dk7bqzmmizsd"; depends=[devtools ggplot2 metafor msm]; }; + EValue = derive2 { name="EValue"; version="1.1.5"; sha256="0lfm3458mh1rfcxhr4gm8gls9lssy277fxi5rbkysls88282j4dc"; depends=[devtools ggplot2 metafor msm]; }; EW = derive2 { name="EW"; version="1.1"; sha256="0wc3v9qisiikvlp28xhlgsxb92fhkm6vslia6d0vpihyai0p1h1g"; depends=[]; }; EWGoF = derive2 { name="EWGoF"; version="2.2.1"; sha256="0n1fx6k9ndb2s9ybzizbqz662c9s1f48q6v697pqhnfy9si1nplz"; depends=[Rcpp]; }; EXRQ = derive2 { name="EXRQ"; version="1.0"; sha256="1iqsr52sl2j5q03122a7rsp6n6a2bkysk2r908c89l36gk4sj2i5"; depends=[mnormt quantreg]; }; - Eagle = derive2 { name="Eagle"; version="1.0.2"; sha256="0n36h23jkac93d9f13bdwvac0fv198fjmh3981z32cn9glz0xbl8"; depends=[data_table matrixcalc Rcpp RcppEigen shiny shinyBS shinyjs shinythemes]; }; + EZtune = derive2 { name="EZtune"; version="1.0.0"; sha256="0a74wnmxbvnm1zil0slg4kphvqc1n03y26zp1a0gpawpkfxcmbch"; depends=[ada doParallel e1071 GA gbm mlbench]; }; + Eagle = derive2 { name="Eagle"; version="1.1.0"; sha256="1n2aqp6pd7cglhmnhf8g086xv4468hhqx6qvlwjbvj6diwhym35c"; depends=[data_table matrixcalc Rcpp RcppEigen shiny shinyBS shinyFiles shinyjs shinythemes]; }; EasyABC = derive2 { name="EasyABC"; version="1.5"; sha256="17qv6y8sf2iwwqcv5wfg6sii259gv5jyr72dnfpir2bw78wb3mqx"; depends=[abc lhs MASS mnormt pls tensorA]; }; EasyHTMLReport = derive2 { name="EasyHTMLReport"; version="0.1.1"; sha256="1hgg8i7py7bx48cldyc7yydf0bggmbj3fx3kwiv9jh1x5wyh929z"; depends=[base64enc ggplot2 knitr markdown reshape2 scales xtable]; }; EasyMARK = derive2 { name="EasyMARK"; version="1.0"; sha256="10slkblbyxq98c3sxgs194dnkx996khfcpxj6jhz355dp35z7c9d"; depends=[coda doParallel foreach MASS random rjags stringr]; }; @@ -1035,30 +1083,32 @@ in with self; { Ecdat = derive2 { name="Ecdat"; version="0.3-1"; sha256="1lvfp2ih8ng3kn3cia687j5fd27iwiak7gk3bhgjp8bnlgblqq02"; depends=[Ecfun]; }; Ecfun = derive2 { name="Ecfun"; version="0.1-7"; sha256="0s4hhvwyi411xr7c1fv098nmwqjcyvh8vy65j5w9hd80l864lvkl"; depends=[fda gdata jpeg MASS RCurl stringi TeachingDemos tis XML]; }; EcoGenetics = derive2 { name="EcoGenetics"; version="1.2.1-5"; sha256="1953q374msvdw91m2nagxkwh5r9gnq5qss6l6mf34hayq3kwm8s9"; depends=[d3heatmap doParallel edgebundleR foreach ggplot2 htmlwidgets igraph jsonlite magrittr networkD3 party pheatmap plotly raster reshape2 rgdal rkt SoDA sp]; }; - EcoHydRology = derive2 { name="EcoHydRology"; version="0.4.12"; sha256="03dzdw79s0cnnd7mv6wfxw374yf66dlcmj10xh6sh5i352697xp1"; depends=[DEoptim operators topmodel XML]; }; + EcoHydRology = derive2 { name="EcoHydRology"; version="0.4.12.1"; sha256="075kgy6cxppkclk6nj5xs1f5yv9w8cpr09xwhf2101a6wswknb88"; depends=[DEoptim operators topmodel XML]; }; EcoIndR = derive2 { name="EcoIndR"; version="1.2"; sha256="1p2m4kramcf71xlm9hbk5l5mb8nmjfac1p3csai7m2gmikf559yj"; depends=[]; }; - EcoNetGen = derive2 { name="EcoNetGen"; version="0.2.0"; sha256="194gry90h6m91zjvv7na8gyf3rws3mzv7rk5xhwrr2znlgcalzis"; depends=[ggplot2 igraph]; }; + EcoNetGen = derive2 { name="EcoNetGen"; version="0.2.2"; sha256="1gz3h97i8bcd3nkkrfl5wwxwjkw0z7qvj1bjksdjplchkag0nk3x"; depends=[ggplot2 igraph]; }; EcoSimR = derive2 { name="EcoSimR"; version="0.1.0"; sha256="13ni3vdfahqjyb9xrv7fmnbj5m5n3jwfh1bl9r0bvhi5w72kb7rj"; depends=[MASS]; }; EcoTroph = derive2 { name="EcoTroph"; version="1.6"; sha256="0zi6g0ra107s47r32mm9h6r1wll3avi0mpjmhcr0nj9y48nv14w3"; depends=[XML]; }; - EcoVirtual = derive2 { name="EcoVirtual"; version="1.0"; sha256="1adhxwi22psr81xh1szjvn6ycv4zw31xjnswk65iazk3sc4vz7wc"; depends=[]; }; + EcoVirtual = derive2 { name="EcoVirtual"; version="1.1"; sha256="1aryl2sb5ak390lgnm427ilm6xv9lmsjhwdnapzc033zvqb099gj"; depends=[]; }; Ecohydmod = derive2 { name="Ecohydmod"; version="1.0.0"; sha256="0imkzjqp3g28l42jz5m4p85wg5rawmn9hy1wys9xndnaliv6d7r2"; depends=[]; }; EconDemand = derive2 { name="EconDemand"; version="1.0"; sha256="1slpwiaxj7w21zdri9myrzwbwzl62m3cnp0g4fr2rkdlzgb6j5yj"; depends=[]; }; EdSurvey = derive2 { name="EdSurvey"; version="2.0.3"; sha256="1aw0b2i7vhfz11nr6ywk873cmgvpfvim89r3m6paqgnq01yyw8nw"; depends=[data_table Formula haven LaF lfactors magrittr MASS Matrix NAEPprimer RColorBrewer readr readxl rvest stringi stringr tibble wCorr xml2 xtable]; }; EffectLiteR = derive2 { name="EffectLiteR"; version="0.4-2"; sha256="1vkg5gi0gysnw0gz9ah8pdnnlkdfsz0jy53ps2jnnpy8lbr45zc9"; depends=[car foreign ggplot2 lavaan lavaan_survey nnet shiny survey]; }; EffectStars = derive2 { name="EffectStars"; version="1.9"; sha256="15n5mrba2s0qxcg3zikfwpxqwv38h39zmvj8sz62ni4pdhrhhjh3"; depends=[VGAM]; }; EffectStars2 = derive2 { name="EffectStars2"; version="0.1-2"; sha256="0121zb627zwkgbb84sn2dclph56dc5rkfjpci5xwd0w99vh3q66l"; depends=[miscTools VGAM]; }; - EffectTreat = derive2 { name="EffectTreat"; version="0.3"; sha256="1y8b1867idjbd7i39hhryg4nyijlv6d828z0jspp80fka3sp8xpw"; depends=[]; }; + EffectTreat = derive2 { name="EffectTreat"; version="0.4"; sha256="05r8frrir2dnivj21raczchf9qligqdccnnpj1kwi0zgr5h4spz6"; depends=[]; }; EffectsRelBaseline = derive2 { name="EffectsRelBaseline"; version="0.5"; sha256="1dsnakcrgmlx44599ii92wvhxbxrh0hij59709wsskx1x1152zvh"; depends=[]; }; EfficientMaxEigenpair = derive2 { name="EfficientMaxEigenpair"; version="0.1.4"; sha256="1s0i9a2vk2g4f5gadsvzjfkw91hcjsrbyjg2vgnj1v17xrwgp40w"; depends=[]; }; ElastH = derive2 { name="ElastH"; version="0.3.1"; sha256="1xgmz0xirvdyjz8l31zb2j91nj0g8ffhvzp44b97473fsj06n1g6"; depends=[dlm]; }; ElemStatLearn = derive2 { name="ElemStatLearn"; version="2015.6.26"; sha256="0r8d0fm4yx7iawcsikksd7i01kbyqz3xkdls74f3ngkvj4iq1rqc"; depends=[]; }; EloChoice = derive2 { name="EloChoice"; version="0.29"; sha256="1r54laim7i8hzgyir47xq7qw8hxzsdw1ss10sljq1rm2lpsci6wk"; depends=[Rcpp RcppArmadillo]; }; + EloOptimized = derive2 { name="EloOptimized"; version="0.3.0"; sha256="185vh8h6r5wqcbaq3glq8k3fr8jp6h3q2h2ly54agi6bi3fvbs05"; depends=[BAMMtools dplyr lubridate magrittr reshape2 rlang rlist]; }; EloRating = derive2 { name="EloRating"; version="0.43"; sha256="0gzpi4qjiqn0lzjwy37pkz6fg7dkp2hv2dfqgzfk32wsj0bswgab"; depends=[zoo]; }; ElstonStewart = derive2 { name="ElstonStewart"; version="1.1"; sha256="1y2g4x3fhi78c2406bk8r8c3x9zhx8ya3qlbnypdm65j0minixsn"; depends=[digest kinship2]; }; Emcdf = derive2 { name="Emcdf"; version="0.1.2"; sha256="0jb59jp1drcwipmk6yzg0cl366i8nhffa13c3x3fmhaj7ifv77vv"; depends=[lattice Rcpp]; }; EmiStatR = derive2 { name="EmiStatR"; version="1.2.1.1"; sha256="1fid29ipmrq2557wcva1miifgwxdcm8g27ws5wb1lq6yiaz0z4w0"; depends=[doParallel foreach lattice shiny xts zoo]; }; - EmissV = derive2 { name="EmissV"; version="0.664.7"; sha256="09m5h0fgj7pavfxwh4anihpq69dkqay9z4xdj0c3rbqvsxgq4bx3"; depends=[data_table lwgeom ncdf4 raster sf sp units]; }; + EmissV = derive2 { name="EmissV"; version="0.664.9"; sha256="0y7bmkv5lwlgimc5prfib321z1wq7xvyfgrfv8wk0wb17d6kk0dp"; depends=[data_table lwgeom ncdf4 raster sf sp units]; }; EmpiricalCalibration = derive2 { name="EmpiricalCalibration"; version="1.3.6"; sha256="0fiwvdzcyz6ayzqfa6j2ygpab1cwbi04gd2c2g1j9qbdq95myipa"; depends=[ggplot2 gridExtra]; }; + EncDNA = derive2 { name="EncDNA"; version="1.0.1"; sha256="1mp9blxa29jwimgp58ligayzq3ydfa2sccs2ppn3ki2sqq01xdpp"; depends=[Biostrings]; }; EnergyOnlineCPM = derive2 { name="EnergyOnlineCPM"; version="1.0"; sha256="1a3wvclqdwcvq5inhliwjnd7xzqbjvzs8h8ncy6qlhjq6s5n7nm8"; depends=[energy MASS]; }; EngrExpt = derive2 { name="EngrExpt"; version="0.1-8"; sha256="0zclvckj2i7j4kfs58hcjcl722vl2y6dcnjz238cjfgwv279gqhp"; depends=[lattice]; }; EnsCat = derive2 { name="EnsCat"; version="1.1"; sha256="1rp354fqq2ihjrmqw9j1qdy86md80xml5sgh2zbyabw3zddmgyn2"; depends=[dendextend ggdendro ggplot2 seqinr]; }; @@ -1068,12 +1118,12 @@ in with self; { EnsemblePenReg = derive2 { name="EnsemblePenReg"; version="0.7"; sha256="00218yh0vzlb5g94asq5nz4i8blppskdzz9fl4c0v3fld3kxz2md"; depends=[EnsembleBase glmnet]; }; EntropyEstimation = derive2 { name="EntropyEstimation"; version="1.2"; sha256="13kb83lfpkw6yq687j0ci23yn5c9dqjibybyyaplk6jixy08lrvy"; depends=[]; }; EntropyExplorer = derive2 { name="EntropyExplorer"; version="1.1"; sha256="02ljnq9ayxg4lrrnb6nlxr1k5ki8dd5i8hjb9fvvb19hwr2id5h4"; depends=[]; }; - EnvCpt = derive2 { name="EnvCpt"; version="1.0"; sha256="0rdcxb924ij3rdcnzfz8pxahvwza2qi2siqpxsafjkg2mrqil9kj"; depends=[changepoint forecast MASS zoo]; }; + EnvCpt = derive2 { name="EnvCpt"; version="1.1.1"; sha256="10j0hsy2ff1zj6bb03cngrw19ynyz65rcpxyk6vpqdqcdkpf3zf9"; depends=[changepoint MASS zoo]; }; EnvNicheR = derive2 { name="EnvNicheR"; version="1.4"; sha256="0hxx9wmzlw0clvdgdsy8msc78nvm81j3naxr57i7lqqa360sjy3a"; depends=[IDPmisc]; }; - EnvStats = derive2 { name="EnvStats"; version="2.3.0"; sha256="0f0sda26in2a25vq8xr6pkskjk10q2pg463h9c1xap3bghq4xgc3"; depends=[ggplot2 MASS nortest]; }; + EnvStats = derive2 { name="EnvStats"; version="2.3.1"; sha256="0ang2s222znrvzvidyvj2sa2bqx95bxicff64p6w2a7z88mx8lyp"; depends=[ggplot2 MASS nortest]; }; EnviroPRA = derive2 { name="EnviroPRA"; version="1.0"; sha256="0yirh3vy7wap0qmm3kvjz9y68gcvp9i8qshv80wh8aijxwklpr8n"; depends=[fitdistrplus kSamples MASS truncdist]; }; EnviroStat = derive2 { name="EnviroStat"; version="0.4-2"; sha256="0ckax6vkx0vwczn21nm1dr8skvpm59xs3dgsa5bs54a3xhn5z9hs"; depends=[MASS]; }; - Epi = derive2 { name="Epi"; version="2.30"; sha256="0gfq4zg2c9cnwh7islsbbzaw80a2wwnh3kjv3wr1fvp11hhhdknk"; depends=[cmprsk data_table etm MASS Matrix numDeriv plyr survival zoo]; }; + Epi = derive2 { name="Epi"; version="2.32"; sha256="14n24xlm7pwdc54w2hlpjhfal1zpzm87rv3rjfckiz47d3w7dwqm"; depends=[cmprsk data_table etm MASS Matrix mgcv numDeriv plyr survival zoo]; }; EpiBayes = derive2 { name="EpiBayes"; version="0.1.2"; sha256="1qfir0dl085c9ib1acsygmj7gihc4ar98k5niqdsgnmji88h17y2"; depends=[coda epiR scales shape]; }; EpiContactTrace = derive2 { name="EpiContactTrace"; version="0.12.0"; sha256="1i84fslz8sdngvkv34zhzjwzrzzxx6f4s31p8f5smmf028jlpyys"; depends=[]; }; EpiCurve = derive2 { name="EpiCurve"; version="2.1-1"; sha256="0y6llpxa8xyfn9cxhq35mzfp1gc7la1708q85q4hz0l115abvk92"; depends=[dplyr ggplot2 ISOweek RColorBrewer scales timeDate]; }; @@ -1082,12 +1132,13 @@ in with self; { EpiILM = derive2 { name="EpiILM"; version="1.4.2"; sha256="16vml2p7c4nv0lfis661x7b9wimrni1ncpa256dh99cps9508j28"; depends=[coda]; }; EpiILMCT = derive2 { name="EpiILMCT"; version="1.1.2"; sha256="1rxq9z5lhcgzn02d9k6vgl2cb5x0s9gsly63byx4gg1h91bsvmp6"; depends=[coda]; }; EpiModel = derive2 { name="EpiModel"; version="1.6.5"; sha256="1h9490x7vna8z2dib6vgkxhpqvbybg655k88jn48i6qkda8dzv54"; depends=[ape deSolve doParallel ergm foreach ggplot2 lazyeval network networkDynamic RColorBrewer tergm]; }; - EpiStats = derive2 { name="EpiStats"; version="1.1"; sha256="0xd9b3miyk2jijraph7zac7k7hqm0vn9wg1fsccfl17xy6h2wq2w"; depends=[dplyr epiR]; }; + EpiStats = derive2 { name="EpiStats"; version="1.2"; sha256="102s7637afm3scif20r75wcfkz9g8k4w55qxv1gqqc1kcmn2zqar"; depends=[dplyr epiR]; }; EpistemicGameTheory = derive2 { name="EpistemicGameTheory"; version="0.1.2"; sha256="0b2gnrvhlsw85qv63ib32pj55l7w63wgvbrj5rb209g6h46fby8m"; depends=[lpSolve]; }; Eplot = derive2 { name="Eplot"; version="1.0"; sha256="1glmkjjj432z9g4gi56pgvfrm5w86iplirnd5hm4s99qci2hgc64"; depends=[]; }; - Equalden_HD = derive2 { name="Equalden.HD"; version="1.0"; sha256="19b529yaffls43fr5vrcrrvkia27mjrcx69r9svafk61z96i6pfm"; depends=[]; }; + Equalden_HD = derive2 { name="Equalden.HD"; version="1.1"; sha256="16cs9hmr14byy11dapkh8c7ygpkks00lirbbpmy5bxgi4pvif8a3"; depends=[]; }; EstCRM = derive2 { name="EstCRM"; version="1.4"; sha256="1p99hmmyiy3havj72jd4xksr1j9gfmy0i7z7f3vqs5sqp72alq1k"; depends=[Hmisc lattice]; }; EstHer = derive2 { name="EstHer"; version="1.0"; sha256="1j8sczwfzil16j85mw5d1c7cxy7wimh0qq7zhmkh7mfnr36m9phr"; depends=[glmnet MASS Rcpp RcppArmadillo]; }; + EstMix = derive2 { name="EstMix"; version="1.0.1"; sha256="13zwhxm0qm83c8k5k4slvq2snkmbq1zz3i5cqvxxwhvkb4b8aja4"; depends=[PSCBS Rcpp RcppArmadillo]; }; EstSimPDMP = derive2 { name="EstSimPDMP"; version="1.2"; sha256="05gp0gdix4d98111sky8y88p33qr5w4vffkp6mg9klggn37kdj8j"; depends=[]; }; EstimateGroupNetwork = derive2 { name="EstimateGroupNetwork"; version="0.1.2"; sha256="148srhlpzh0scvnkjbkyia1pr8a2ridabm3dahw4zn7p3cryiyb1"; depends=[igraph qgraph]; }; EthSEQ = derive2 { name="EthSEQ"; version="2.1.2"; sha256="0w75d8kw1bf4mfgk8rrx6vzq002z2588kxgadyfag0vk9s4akxi3"; depends=[data_table gdsfmt geometry MASS plot3D SNPRelate]; }; @@ -1096,11 +1147,12 @@ in with self; { EvalEst = derive2 { name="EvalEst"; version="2015.4-2"; sha256="1jkis39iz3zvi5yfd0arvw7bym6naq45f5cravywg8c37n9v967x"; depends=[dse setRNG tfplot tframe]; }; EvaluationMeasures = derive2 { name="EvaluationMeasures"; version="1.1.0"; sha256="0b65y4rb650hhlgc18z0sm0danrrawqkazzdl9krl877djrgx87g"; depends=[]; }; Evapotranspiration = derive2 { name="Evapotranspiration"; version="1.12"; sha256="065rd8hwbzanfd0px0nli9szj9afm06a07vxl9bwj9n744whi3r3"; depends=[zoo]; }; + EventDetectR = derive2 { name="EventDetectR"; version="0.3.1"; sha256="1nh859q9d2k9fpgyj9g7dvhbhbychhng174mlmyl8x9l7dvmiydx"; depends=[forecast imputeTS]; }; EventStudy = derive2 { name="EventStudy"; version="0.34"; sha256="04w8cjmpy0ndcrad20ni9wa03pds8bvirks258pxyflx2kdvj0bf"; depends=[curl data_table dplyr ggplot2 httr jsonlite magrittr miniUI openxlsx purrr RColorBrewer readr rstudioapi scales shiny stringr testthat tidyquant]; }; EvoRAG = derive2 { name="EvoRAG"; version="2.0"; sha256="0gb269mpl2hbx1cqakv3qicpyrlfb4k8a3a7whhg90masbgmh8f6"; depends=[]; }; EvolutionaryGames = derive2 { name="EvolutionaryGames"; version="0.1.0"; sha256="1v6xpxk4kbjbmv8vh517rd76gyrd9znpxqdh4jqz8lvdpnpla4wv"; depends=[deSolve geometry ggplot2 interp MASS reshape2 rgl]; }; Evomorph = derive2 { name="Evomorph"; version="0.9"; sha256="1br2fyggwz2mxpic8sk384xq1lpbpv0j5gf6xyzhkn2n7kfpf6d5"; depends=[geomorph ggplot2 reshape2 stringr]; }; - ExPanDaR = derive2 { name="ExPanDaR"; version="0.2.0"; sha256="1iwkzrfdvxgik5c1vq04351var0micf4vh6zmkzyd8qbyvxwnnch"; depends=[CodeDepends corrplot dplyr DT ggplot2 Hmisc kableExtra lfe PKI scales shiny shinycssloaders stargazer tictoc tidyr]; }; + ExPanDaR = derive2 { name="ExPanDaR"; version="0.3.0"; sha256="1d6jzgdyawyvs72jxlw4dxkk6566ya67p6lsj70wdakmaixwfsmj"; depends=[corrplot dplyr DT ggplot2 Hmisc kableExtra lfe lmtest multiwayvcov PKI rio scales shiny shinycssloaders stargazer tictoc tidyr]; }; ExPosition = derive2 { name="ExPosition"; version="2.8.19"; sha256="04s9kk8x6khvnryg6lqdwnyn79860dzrjk8a9jyxgzp94rgalnnz"; depends=[prettyGraphs]; }; Exact = derive2 { name="Exact"; version="1.7"; sha256="0d0h406w2l99gxq6pmh9crxxrvdidcajk7bqzmifl7nfb77vp1av"; depends=[]; }; ExactCIdiff = derive2 { name="ExactCIdiff"; version="1.3"; sha256="1vayq8x7gk1fnr1jrlscg6rb58wncriybw4m1z0glfgzr259103y"; depends=[]; }; @@ -1127,16 +1179,15 @@ in with self; { FBN = derive2 { name="FBN"; version="1.5.1"; sha256="0723krsddfi4cy2i3vd6pi483qjxniychnsi9r8nw7dm052nb4sf"; depends=[]; }; FCGR = derive2 { name="FCGR"; version="1.0-0"; sha256="015nnnc9fasx0qjrc3lbxv14rqwyx36xzsw9076grwm5pqahrdsb"; depends=[kerdiest KernSmooth MASS mgcv nlme pspline sfsmisc]; }; FCMapper = derive2 { name="FCMapper"; version="1.1"; sha256="1yjh8rs65nqslvwv7x4rif469zds41s7v3vhq6pca1y17kvj2in1"; depends=[igraph]; }; - FCNN4R = derive2 { name="FCNN4R"; version="0.6.2"; sha256="089vq8kaag4j6xl3h9pb3ch8lfg0mmi96jgm4xhgr40rr0m3ijma"; depends=[Rcpp]; }; FD = derive2 { name="FD"; version="1.0-12"; sha256="0xdpciq14i8rh7v6mw174hip64r7mrzhx7gwri3vp9y7a1380sbi"; depends=[ade4 ape geometry vegan]; }; FDGcopulas = derive2 { name="FDGcopulas"; version="1.0"; sha256="1i86ns4hq74y0gnxfschshjlc6if3js0disjb4bwfizaclwbw3as"; depends=[numDeriv randtoolbox Rcpp]; }; FDRSeg = derive2 { name="FDRSeg"; version="1.0-3"; sha256="0dh6m5vlx664kryh56jzi3zxydjwa5217nhbwn6adp0q5qdh6d8a"; depends=[Rcpp stepR]; }; FDRreg = derive2 { name="FDRreg"; version="0.1"; sha256="17hppvyncbmyqpi7sin9qsrgffrnx8xjcla2ra6y0sqzam1145y4"; depends=[fda mosaic Rcpp RcppArmadillo]; }; FDRsampsize = derive2 { name="FDRsampsize"; version="1.0"; sha256="0g8kawzyi9x5yndvh330wzqw6rvcnprwq56ngd0j6z51hvvw8qhw"; depends=[]; }; - FDboost = derive2 { name="FDboost"; version="0.3-1"; sha256="1bwf3kkx912386ljb210hci1y2vg0wcd6v6i6arhzzbr7gc0y39q"; depends=[gamboostLSS MASS Matrix mboost mgcv stabs zoo]; }; - FENmlm = derive2 { name="FENmlm"; version="2.1.1"; sha256="00cm1k5lqa7i2aginhkw4f430gigr7cj7g6shr83z61axqfmwdg4"; depends=[MASS Matrix numDeriv Rcpp]; }; + FDboost = derive2 { name="FDboost"; version="0.3-2"; sha256="1ahdq49ijj4j2yykmzbpgrjn0sm09nzmd33k317y157hnf6zyxvs"; depends=[gamboostLSS MASS Matrix mboost mgcv stabs zoo]; }; + FENmlm = derive2 { name="FENmlm"; version="2.2.2"; sha256="1k8andhpk8drdcjnwvv7hzyfj0qnp6h843naxdvhbj1qp9gs9vr0"; depends=[Formula MASS numDeriv Rcpp]; }; FFD = derive2 { name="FFD"; version="1.0-6"; sha256="19yqb45qj54fmjkqfjbcqsx3wz6fk8inrqif9ds93xjkm6aaiqgp"; depends=[R2HTML tkrplot]; }; - FFTrees = derive2 { name="FFTrees"; version="1.3.5"; sha256="0qz3w7qh8lgl4fn2hmrd4mnp17vaz5yf7kcpcrm038xvqq3w5c5k"; depends=[circlize e1071 igraph progress randomForest rpart stringr yarrr]; }; + FFTrees = derive2 { name="FFTrees"; version="1.4.0"; sha256="0s2h81vdh8d41kwz5ja831q11wrb7ywdd7aq46x3y9sgg3aabd44"; depends=[caret circlize e1071 igraph pROC progress randomForest rpart stringr yarrr]; }; FField = derive2 { name="FField"; version="0.1.0"; sha256="05q16v2vv64qhbnf2l66dwzmvgzyaq8vxwwdabp534bw7z7zpi8q"; depends=[]; }; FGSG = derive2 { name="FGSG"; version="1.0.2"; sha256="1r3sjhzf9gcnbcx6rqr1s555z8lcwm3fxl096md2jji336ijlk79"; depends=[]; }; FGalgorithm = derive2 { name="FGalgorithm"; version="1.0"; sha256="1dq6yyb3l6c9fzvk9gs6pb240xb5hvc6fh8p3qd3c91b3m289mcc"; depends=[]; }; @@ -1148,17 +1199,19 @@ in with self; { FILEST = derive2 { name="FILEST"; version="1.0.3"; sha256="0i622rfr9sb22c922kk0gg4l1akx54m6zx7wy3w1p5xrr1zjjyvp"; depends=[KRIS rARPACK]; }; FIT = derive2 { name="FIT"; version="0.0.5"; sha256="1hky7m5b7n0d7lm79b7l7p055f8zfl7gsjdvbq09c4iwdli8h33n"; depends=[gglasso MASS Rcpp RcppEigen XML]; }; FITSio = derive2 { name="FITSio"; version="2.1-0"; sha256="021xmbavigg70m96xw1bvsdasi5yj2wmafgb6xw4b09fmyv9hvjp"; depends=[]; }; + FKF = derive2 { name="FKF"; version="0.1.5"; sha256="1qzf7y3f4xfirjkm795rcxckjbw6sn7xpilhkyvayqm2vyhf7518"; depends=[RUnit]; }; FLLat = derive2 { name="FLLat"; version="1.2-1"; sha256="0306bpwp2az4x4m5sv88hlh7vs0y5isfby7lxrn2gjnk76gg6mw1"; depends=[gplots]; }; FLR = derive2 { name="FLR"; version="1.0"; sha256="0k50vi73qj7sjps0s6b2hq1cmpa4qr2vwkpd2wv2w1hhhrj8lm0n"; depends=[combinat]; }; - FLSSS = derive2 { name="FLSSS"; version="5.2"; sha256="1px9n0rnjg32ngy8bs0z1jzmspnkn15q273w74vxjykqfd5xayfd"; depends=[Rcpp RcppParallel]; }; - FLightR = derive2 { name="FLightR"; version="0.4.6"; sha256="0q1azhpdkasjsca5z4p0gnp5iirs6f9dyg6pn8269x7k1mw0pib4"; depends=[bit CircStats circular fields GeoLight ggmap ggplot2 ggsn maptools mgcv nlme raster RcppArmadillo rgdal rgeos sp truncnorm]; }; + FLSSS = derive2 { name="FLSSS"; version="7.6"; sha256="1cjhzjl8s4bnx457v4pal945j2ij75s8gdbbr9a3cambh0sc821y"; depends=[Rcpp RcppParallel]; }; + FLightR = derive2 { name="FLightR"; version="0.4.7"; sha256="0qnhyn363c8yb541ngygm5jzax1csjdq0mmvvvazncirgk45q9y5"; depends=[bit CircStats circular fields GeoLight ggmap ggplot2 ggsn maptools mgcv nlme raster RcppArmadillo rgdal rgeos sp truncnorm]; }; FMC = derive2 { name="FMC"; version="1.0.0"; sha256="1pfqxx7slgcmw4al7i8hy59f4han6b0b7b5az7yh1mscdnghl9bj"; depends=[minimalRSD]; }; FME = derive2 { name="FME"; version="1.3.5"; sha256="1r1mb61hylsgcryac35bz1pzfcw27gzpvfwkkf0sh754ya6xh69n"; depends=[coda deSolve MASS minpack_lm minqa rootSolve]; }; FMP = derive2 { name="FMP"; version="1.4"; sha256="0w11a78nz4n7zih9h00xkv7prsy9hlxphbpa7hpnbvq9r98g08qm"; depends=[]; }; FMStable = derive2 { name="FMStable"; version="0.1-2"; sha256="00viigpqfbqc4hyl9cwicbwqf2ksjak28qrqaa16jhbqz93j4fck"; depends=[]; }; FMsmsnReg = derive2 { name="FMsmsnReg"; version="1.0"; sha256="0d58n7lz8d6xgzvyznmhw1byshyiiwk8dc462qr18cl51p0lqnkv"; depends=[mvtnorm]; }; - FNN = derive2 { name="FNN"; version="1.1"; sha256="1kncmiaraq1mrykb9fj3fsxswabk3l71fnp1vks0x9aay5xfk8mj"; depends=[]; }; + FNN = derive2 { name="FNN"; version="1.1.2.1"; sha256="1n61jrcmakqif8f827x4qnlhm2jqpj5fgjj65c4p0kdd8lzw8pqp"; depends=[]; }; FPCA2D = derive2 { name="FPCA2D"; version="1.0"; sha256="18bb90ppd9gd8pg9jxfyfkmlsaqk8w25fgaj9fk18ybm2nhsxqm6"; depends=[corpcor]; }; + FPCA3D = derive2 { name="FPCA3D"; version="1.0"; sha256="1hrk9caad2s76dx59clxhia45a85khk1y2ii7955f336x55q34a5"; depends=[]; }; FPDclustering = derive2 { name="FPDclustering"; version="1.2"; sha256="1qj1dddzcy2jx4903kmzzhcwfi13c2x9kva2n4rzqh5n560nvg57"; depends=[ThreeWay]; }; FPV = derive2 { name="FPV"; version="0.5"; sha256="0pxa8lbcxw2hx2n0frkx0pdndlcfm7gnh9qay9q53cf5gqzzwvvc"; depends=[FuzzyNumbers FuzzyNumbers_Ext_2]; }; FRACTION = derive2 { name="FRACTION"; version="1.0"; sha256="0g25dzsbharsq8bzfka96zccaqppdclax24mz5m080ddg4y8zj49"; depends=[]; }; @@ -1167,14 +1220,14 @@ in with self; { FREGAT = derive2 { name="FREGAT"; version="1.1.0"; sha256="04rcbwbwi53d8his0ss9hj4s2c28r292f4f2ayl70av7k74nnccy"; depends=[Matrix]; }; FREQ = derive2 { name="FREQ"; version="1.0"; sha256="01nra30pbnqdd63pa87lcws3hnhhzybcjvx2jqyxjghn6khz47j0"; depends=[]; }; FRESA_CAD = derive2 { name="FRESA.CAD"; version="3.0.1"; sha256="05hcds1g1hkpr3fww1i462p633xlhwv594fpbphvw8fm10mc0hns"; depends=[Hmisc miscTools pROC Rcpp RcppArmadillo stringr]; }; - FRK = derive2 { name="FRK"; version="0.2.1"; sha256="042j6n3yx46123d0qsghbynjf1h0iri4kfd92z5nbcgv7wggk4d3"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime sparseinv]; }; + FRK = derive2 { name="FRK"; version="0.2.2"; sha256="0m0ngxanyq19myzza4fb75k9vb67mv17iny847bv9qrgg2vbm5r8"; depends=[digest dplyr ggplot2 Hmisc Matrix plyr Rcpp sp spacetime sparseinv]; }; FRegSigCom = derive2 { name="FRegSigCom"; version="0.2.2"; sha256="1jbksgx561fc4bgsyz3d1b3amqc80bzzl96ri74rbd3lqbhgrn0y"; depends=[fda Matrix Rcpp RcppEigen]; }; FSA = derive2 { name="FSA"; version="0.8.20"; sha256="1vvsjwyb03wiqxlzgig3gxn9aj5lr7kx183gsjz2xysxp07rv9hf"; depends=[car dplyr dunn_test epitools gplots lmtest plotrix plyr sciplot]; }; FSAdata = derive2 { name="FSAdata"; version="0.3.6"; sha256="0r4g3s4a7hizxj7zlp8wb5sldnx6kc99vak8ww715bhzpzq40qf8"; depends=[]; }; FSInteract = derive2 { name="FSInteract"; version="0.1.2"; sha256="1aci1398aaz0nrl5jy6yh7xik355wf7pwngrsak4qsi94vdj05iy"; depends=[Matrix Rcpp]; }; FSTpackage = derive2 { name="FSTpackage"; version="0.1"; sha256="1fjqsl59fg4x9vkbv4b0qmfxlaa2q3rzpl40grv24yg6ixfagmdb"; depends=[CompQuadForm MASS Matrix mvtnorm SKAT]; }; FSelector = derive2 { name="FSelector"; version="0.31"; sha256="1ryqrwz9h7ggxvmxyw4viajlkvd3r7i6ihcfrwsz6axyk5y0qarg"; depends=[digest entropy randomForest RWeka]; }; - FSelectorRcpp = derive2 { name="FSelectorRcpp"; version="0.1.10"; sha256="1i844k8qacbxv4hzv2d8d0jxijf2p2r1xh1ihcp4dijc9ap8wvg8"; depends=[BH foreach iterators Rcpp RcppArmadillo testthat]; }; + FSelectorRcpp = derive2 { name="FSelectorRcpp"; version="0.2.1"; sha256="1xzb59p3byby5wbas48qpzkmsai7xk0nk1g1iz80m22b9p521n85"; depends=[BH foreach iterators Rcpp RcppArmadillo testthat]; }; FTICRMS = derive2 { name="FTICRMS"; version="0.8"; sha256="0kv02mdmwflhqdrkhzb55si5qnqqgdadgyabqc2hwr6iccn7aq8c"; depends=[lattice Matrix]; }; FTRLProximal = derive2 { name="FTRLProximal"; version="0.3.0"; sha256="0wnlswvxiw7gvmn9yq1v8jixwspfbvcg3rklqcd0ib38d72ww7w0"; depends=[Matrix]; }; FUNLDA = derive2 { name="FUNLDA"; version="1.1"; sha256="1qqwpics63qab43mvpm275rk9iywawr4gap0qa832i6iy3jp1h3c"; depends=[Rcpp RcppArmadillo]; }; @@ -1182,7 +1235,7 @@ in with self; { FWDselect = derive2 { name="FWDselect"; version="2.1.0"; sha256="0w0hkmhcz7h1lixk7p3yffbbalgxwh2lv463vqz361k80sri6wz7"; depends=[cvTools mgcv]; }; FacPad = derive2 { name="FacPad"; version="3.0"; sha256="0h7knzin0rfk25li127zwjsyz223w7nx959cs328p6b2azhgn59b"; depends=[MASS Rlab]; }; FactMixtAnalysis = derive2 { name="FactMixtAnalysis"; version="1.0"; sha256="1l4wfp39b7g38vdk6jpd5zq08sjhsg0s71f662aca2rj6l3a2x3r"; depends=[MASS mvtnorm]; }; - FactoClass = derive2 { name="FactoClass"; version="1.2.4"; sha256="0rzbzl32hk4mrs6njm4cnj84ifsf52ms5khy43m9bfmwwmadbilr"; depends=[ade4 ggplot2 ggrepel KernSmooth scatterplot3d xtable]; }; + FactoClass = derive2 { name="FactoClass"; version="1.2.7"; sha256="0hvlr9cw6wfckl8rzl5qqyp0h8rv8gcnyj6x930jq7h44kj0ji7d"; depends=[ade4 ggplot2 ggrepel KernSmooth scatterplot3d xtable]; }; FactoInvestigate = derive2 { name="FactoInvestigate"; version="1.3"; sha256="1924f5sfadgs47ja1ljwqm3slnmqqz1pwxhh9cn1rg1hi8g7db6f"; depends=[FactoMineR rmarkdown rrcov]; }; FactoMineR = derive2 { name="FactoMineR"; version="1.41"; sha256="1h20hydav6l2b7bngqw1av4l5rrh0wk58nhailga1f4qw9lrv259"; depends=[car cluster ellipse flashClust lattice leaps MASS scatterplot3d]; }; FactorsR = derive2 { name="FactorsR"; version="1.2"; sha256="0y6r5ch0h0sag1xinvnjr7q4495naygvi5iiqq9bc51ijv228c0m"; depends=[]; }; @@ -1203,12 +1256,11 @@ in with self; { FastRWeb = derive2 { name="FastRWeb"; version="1.1-1"; sha256="0xh3710kvnc60pz9rl5m3ym2cxf0mag9gi29y7j3fl4dh2k7zf74"; depends=[base64enc Cairo]; }; FastSF = derive2 { name="FastSF"; version="0.1.1"; sha256="1xajav45h57hchzkvl2pb4mz9xy433lq74jnry0icid8dai5xhwb"; depends=[limSolve Rcpp RcppArmadillo]; }; FatTailsR = derive2 { name="FatTailsR"; version="1.7-5"; sha256="1l2anaf4kixidmvya64ni5b78bl9w2n6xf1lnf297lkdka8gxigw"; depends=[minpack_lm timeSeries]; }; - FateID = derive2 { name="FateID"; version="0.1.2"; sha256="1ky03qc6vc2q8v9inanm0bmybjjcx53izjfylszhmnlgph1fp6n8"; depends=[DESeq2 destiny lle locfit pheatmap princurve randomForest RColorBrewer rgl Rtsne som zoo]; }; + FateID = derive2 { name="FateID"; version="0.1.4"; sha256="1v3zgxr8qydpkxzpbxn3spqy4xadf1h0wx3nk4ia9dkmxz6qq5hy"; depends=[lle locfit pheatmap princurve randomForest RColorBrewer rgl Rtsne som]; }; FeaLect = derive2 { name="FeaLect"; version="1.14"; sha256="1h6jc8n57mvyz3gi2jdx5xacwv5iim5sx86qzrg3v1higfr54b1l"; depends=[lars rms]; }; FeatureHashing = derive2 { name="FeatureHashing"; version="0.9.1.3"; sha256="0k8n3c0yiz6bb9rq6ra8z2hypb4hw4qcsdfbrgrw74kqivscs62i"; depends=[BH digest magrittr Matrix Rcpp]; }; - FedData = derive2 { name="FedData"; version="2.5.4"; sha256="18j98l3bx8psd13nb47y7qrs58ds1i1pbib1d6q1178pf1k474i3"; depends=[curl data_table devtools dplyr foreach Hmisc httr igraph lubridate magrittr ncdf4 raster readr rgdal rgeos sf soilDB sp stringr]; }; + FedData = derive2 { name="FedData"; version="2.5.5"; sha256="0krfz76mxw0dybm4adqf5mg53g8gpypp5sk2z99s7b54w196cmqh"; depends=[curl data_table devtools dplyr foreach Hmisc httr igraph lubridate magrittr ncdf4 raster readr rgdal rgeos sf soilDB sp stringr]; }; FeedbackTS = derive2 { name="FeedbackTS"; version="1.4"; sha256="1mcsr48hvrpfnk2f0z1bc8556jf848bpd8prm3y46gqdj452wpmm"; depends=[geoR mapdata maps proj4 sp]; }; - Fgmutils = derive2 { name="Fgmutils"; version="0.9.4"; sha256="0k5pafgrcb7smklgzgw2mf6npj55nm5fsr6k0xp6ji380rvdxc0y"; depends=[data_table devEMF ggplot2 gridExtra plyr png ReporteRs sqldf stringr]; }; FieldSim = derive2 { name="FieldSim"; version="3.2.1"; sha256="1snz2wja3lsgxys0mdlrjjvk5575cyd64mjipafibwcs97bva5x1"; depends=[RColorBrewer rgl]; }; FinAna = derive2 { name="FinAna"; version="0.1.2"; sha256="09svg5z52vv90ih85awgh6ns3pqi789qjm2wi1gb9hbg9v5g7pdv"; depends=[]; }; FinAsym = derive2 { name="FinAsym"; version="1.0"; sha256="0v15ydz4sq9djwcdcfp90mk8l951rry7h91d7asgg53mddbxjj6f"; depends=[]; }; @@ -1218,16 +1270,16 @@ in with self; { FinancialMath = derive2 { name="FinancialMath"; version="0.1.1"; sha256="11nhphvd7bvbc7xfs85rib763r1mpvxmsj6hgzfib5aifib5k5js"; depends=[]; }; FindAllRoots = derive2 { name="FindAllRoots"; version="1.0"; sha256="0n4wfm21qj5zn06jqnzxa0w9mfn18dqi6hk1jjqa56dxqw1k7vw0"; depends=[]; }; FindIt = derive2 { name="FindIt"; version="1.1.4"; sha256="1rnkxngkqsmqs0d0m8ihscpsigxbjgl5ga5nyfwf97b1hrbv4j37"; depends=[arm ggplot2 glinternet glmnet igraph lars lmtest Matrix quadprog sandwich]; }; - FinePop = derive2 { name="FinePop"; version="1.5.0"; sha256="0dis6nxdlgvznsv0817hnfc4nirv7vvzi0n1wd378zdn60j2fwbv"; depends=[]; }; + FinePop = derive2 { name="FinePop"; version="1.5.1"; sha256="184707yvh2mydx42vxrdgv0n4v2dad4an7c4yvlyb9d7z6h0sw2x"; depends=[]; }; FisHiCal = derive2 { name="FisHiCal"; version="1.1"; sha256="1dds629jlja3vw2l010n1334yh3z10nijqksr0q98ckd2yrwg2rf"; depends=[igraph Rcpp RcppArmadillo]; }; - FishResp = derive2 { name="FishResp"; version="0.3.0"; sha256="1rn4vpg33q7x7j0srjndz3c16gzl97f31pvcqcnbnp1c687irb6l"; depends=[chron lattice mclust respirometry rMR]; }; + FishResp = derive2 { name="FishResp"; version="1.0.2"; sha256="0ljibh3nchrlyq2bihaxacpqvw0simw6q4i9rv8lf04viyrbvi6y"; depends=[chron lattice mclust respirometry rMR]; }; + FisherEM = derive2 { name="FisherEM"; version="1.5.1"; sha256="1s7gfdw840f51mn76jvcnwpwcf3dzf2w81wlyxqkij45sink92yz"; depends=[elasticnet MASS]; }; FitAR = derive2 { name="FitAR"; version="1.94"; sha256="1mkk3kvfq4v0pdabnhbwrk31ji2mv2v6ns16xsvvr1qyg2fnx6hq"; depends=[bestglm lattice leaps ltsa]; }; FitARMA = derive2 { name="FitARMA"; version="1.6"; sha256="1r9mqrqkm4wh3nd6v9wmpj23gw21i4p89p6z4c7639kn4f590ldk"; depends=[FitAR]; }; FixSeqMTP = derive2 { name="FixSeqMTP"; version="0.1.2"; sha256="0v1cwq8gapgandm7wiw8p6av6qigydlpmwi6w02p1y7f0hf5ifnp"; depends=[]; }; FixedPoint = derive2 { name="FixedPoint"; version="0.5"; sha256="1jnkbb52g3avs0pm37g5qn4m3ssn2qc6adr8xp5z7ahsbkffkyw2"; depends=[MASS]; }; FlexDir = derive2 { name="FlexDir"; version="1.0"; sha256="1gb5alv9jsnw0135g63cy757pxhdw6cgwfm8dpcm8dj9zqg10dkm"; depends=[]; }; FlexGAM = derive2 { name="FlexGAM"; version="0.7.0"; sha256="1pjlsi747j347vwn94391xr3aknnspgw7rc1jnin7g0n1fgkcww4"; depends=[MASS Matrix mgcv scam]; }; - FlexParamCurve = derive2 { name="FlexParamCurve"; version="1.5-3"; sha256="0766ghwbdd7r4yj5xf31hnknn775ziw1hhrn13wf8bibyd8blz70"; depends=[nlme]; }; FloodMapper = derive2 { name="FloodMapper"; version="1.0"; sha256="09pr6324namqrwdr2impgqmdmsf34g9pq91091cg9b1031djgzyq"; depends=[magick raster rgdal sp]; }; FlowRegEnvCost = derive2 { name="FlowRegEnvCost"; version="0.1.1"; sha256="0lw4kv4z0s23jy11y53rxxh7zxa7vajxrcnjgxd74xxs64vjlj88"; depends=[zoo]; }; FlowScreen = derive2 { name="FlowScreen"; version="1.2.5"; sha256="1kslqvxm73s8fvhf6ahmxmjgs73b78lcbcf4af1cp7axksp4bv8v"; depends=[changepoint evir zyp]; }; @@ -1235,14 +1287,16 @@ in with self; { ForIT = derive2 { name="ForIT"; version="1.0"; sha256="0mi2cw09mbc54s8qwcwxin2na1gfyi60cdssy2ncynma7alq3733"; depends=[]; }; ForImp = derive2 { name="ForImp"; version="1.0.3"; sha256="0ai4i6q233sdsi8xilpbkxjqdf4pxw93clkdkhcxal6q43rnf7vd"; depends=[homals mvtnorm sampling]; }; ForeCA = derive2 { name="ForeCA"; version="0.2.4"; sha256="1i19lmhl1kgfnd7zipjr6xp5ir9rvjy13sbq321jaf8ya60bjdd9"; depends=[ifultools MASS reshape2 sapa]; }; - ForecastComb = derive2 { name="ForecastComb"; version="1.2"; sha256="1sx151a37aadvki3bvlya4g5mbd8ns9644n4mc6f6mhglikx5y2g"; depends=[forecast ggplot2 Matrix mtsdi psych quadprog quantreg]; }; + ForecastComb = derive2 { name="ForecastComb"; version="1.3.1"; sha256="07cbiv172mpkwvg6svhwgavlfy2144ir3y1l7w37wbd0ygs514id"; depends=[forecast ggplot2 Matrix mtsdi psych quadprog quantreg]; }; ForecastCombinations = derive2 { name="ForecastCombinations"; version="1.1"; sha256="07vzgm2jy992p1l9b8rsv2lbc8cbfzvql85n5ah4p4l3zjxdxgk9"; depends=[quadprog quantreg]; }; ForecastFramework = derive2 { name="ForecastFramework"; version="0.9.0"; sha256="131h9f148wn89znzsnym43amlvf4s7jzg4f2p7ld9ns7727sf56q"; depends=[abind dplyr lubridate magrittr R6 reshape2]; }; ForestTools = derive2 { name="ForestTools"; version="0.2.0"; sha256="0q9nk9n001bnz5hd8cxj6wmaf8c7g0kwfkpa0hk6ap42666rrrah"; depends=[APfun imager raster rgeos sp]; }; FormalSeries = derive2 { name="FormalSeries"; version="1.0"; sha256="09m4ifinasww0xfprs29xsrqhxxkw9zffb3919xnkkjkwp0nax4v"; depends=[]; }; Formula = derive2 { name="Formula"; version="1.2-3"; sha256="0wiqh8rr9d5ciy80wj8f5fnmiiw0ywanvvnhkwd622dx42dk848l"; depends=[]; }; ForwardSearch = derive2 { name="ForwardSearch"; version="1.0"; sha256="0yd47832piqxzjxgl7bc8pn0c8f7vbgsm9z6894rzyi615kjl70b"; depends=[robustbase]; }; - FourScores = derive2 { name="FourScores"; version="1.0"; sha256="0d21mrl9bzsvhljv7ymiyck508smp66w9qivrb2rp0p803h9yibm"; depends=[]; }; + FossilSim = derive2 { name="FossilSim"; version="2.0.0"; sha256="1kv737bpq4vii2q32jljdiv3dlcvj05xkxkd5s0d5961ypgvm04d"; depends=[ape TreeSim]; }; + FourScores = derive2 { name="FourScores"; version="1.5.1"; sha256="1la9d1hfcmi0zg58yl0a7nj36giagh0fwrc7wxyqdq0c7zf1hfzq"; depends=[]; }; + FourgameteP = derive2 { name="FourgameteP"; version="0.1.0"; sha256="15yn47737768fkjjv8ykc9lw7x58pq44k90d9d4c9hp20zw5f3by"; depends=[]; }; FrF2 = derive2 { name="FrF2"; version="1.7-2"; sha256="1qjgx7zbnabbs4zq7hn3j1i1xyy4yjwnz7pn25kz9s3szqr1fk66"; depends=[BsMD DoE_base igraph scatterplot3d sfsmisc]; }; FrF2_catlg128 = derive2 { name="FrF2.catlg128"; version="1.2-1"; sha256="0i4m5zb9dazpvmnp8wh3k51bm0vykh4gncnhdg71mfk4hzrfpdac"; depends=[FrF2]; }; FractalParameterEstimation = derive2 { name="FractalParameterEstimation"; version="1.1.1"; sha256="0l015v99hzmiyic0klvq71ljk9f8ipr57ki7x4cjyz1gam9f84p5"; depends=[]; }; @@ -1250,7 +1304,7 @@ in with self; { Frames2 = derive2 { name="Frames2"; version="0.2.1"; sha256="0xbz19v5r1h15p8mf94vacw04h3kvmm88ayy4b1aqxrd925n63mw"; depends=[MASS nnet sampling]; }; FreeSortR = derive2 { name="FreeSortR"; version="1.3"; sha256="1m6ahhixbbizzn09pz71zvinrdshn3j6gmy05jdxa9d932agqk0w"; depends=[ellipse smacof vegan]; }; FreqProf = derive2 { name="FreqProf"; version="0.0.1"; sha256="1yqn2435l2sghfcv5mma0rv9yqvpa69z8cqqsjlrlbih9gib82d4"; depends=[ggplot2 reshape2 shiny]; }; - FunChisq = derive2 { name="FunChisq"; version="2.4.5-1"; sha256="10472bclx40ha5nz15csyk3j3kwdzfb22wx64zc1s16s903w9jhw"; depends=[BH Rcpp]; }; + FunChisq = derive2 { name="FunChisq"; version="2.4.5-2"; sha256="1a5ladzpm62cap8gdz11kjlwyzkq84nx2xbnbjc36x2skzlqpcza"; depends=[BH Rcpp]; }; FunCluster = derive2 { name="FunCluster"; version="1.09"; sha256="0i73asn1w4s6ydf2ddn5wpr0mwbbxzgmaly1pslarzkx71wk03fz"; depends=[cluster Hmisc]; }; FuncMap = derive2 { name="FuncMap"; version="1.0.10"; sha256="0iaay6qz9a2s77xjfpp7wm37y7xwnvmlw6s5k5riccmqzc6dcjs7"; depends=[mvbutils]; }; Funclustering = derive2 { name="Funclustering"; version="1.0.1"; sha256="0i6g98mfgdyc9hdzvviynrgqhkzicp8y6s0scqy3ifgk9h1k79dw"; depends=[fda Rcpp RcppEigen]; }; @@ -1279,15 +1333,15 @@ in with self; { GANPA = derive2 { name="GANPA"; version="1.0"; sha256="0ia8djv46jm397nxjrm9yc5gacf1r4z0ckiliz57cbrqwh7z2wpa"; depends=[GANPAdata]; }; GANPAdata = derive2 { name="GANPAdata"; version="1.0"; sha256="0mhdadl7zgsacn59ym42magg3214k1xhabwn78fv7kgccszcgc86"; depends=[]; }; GAR = derive2 { name="GAR"; version="1.1"; sha256="12xgk87bndinx7ibaasn51a9fad3ymvpjmixa7l18pfy99l3pcll"; depends=[httr jsonlite]; }; - GAS = derive2 { name="GAS"; version="0.2.6"; sha256="18a3hagwfy0xa7abkwgf2pk5l2n0bxg4kr8y0m5iapkbc3gx5rvz"; depends=[MASS numDeriv Rcpp RcppArmadillo Rsolnp xts zoo]; }; + GAS = derive2 { name="GAS"; version="0.2.9"; sha256="1h588g4khqhc0laxdqmzjz4zilb2gww9xkm0p7d59k9b70k7wbcx"; depends=[cubature MASS numDeriv Rcpp RcppArmadillo Rsolnp xts zoo]; }; GAabbreviate = derive2 { name="GAabbreviate"; version="1.3"; sha256="0cq6bg3w0ji44rsz1p4j17fk0jg8rafbjixwi3fjdndc3yd874r5"; depends=[GA psych]; }; GAparsimony = derive2 { name="GAparsimony"; version="0.9.2"; sha256="0c8al4kw1fd9krninpxijg99lhfmlw4mf2623md2and25r6ixlld"; depends=[foreach iterators]; }; GB2 = derive2 { name="GB2"; version="2.1"; sha256="06rcck97pdm1rsb02cy0jd9fknv0mz5jwk364gsaahdk56ddk18a"; depends=[cubature hypergeo laeken numDeriv survey]; }; GBJ = derive2 { name="GBJ"; version="0.5.2"; sha256="1zfddk1gn1hh67x9n5zrav5gmmrfdbnf29cz72kd3g64z2f78fgw"; depends=[BH mvtnorm Rcpp SKAT]; }; GCAI_bias = derive2 { name="GCAI.bias"; version="1.0"; sha256="10092mwpmfbcga0n39a0i6g8xxch8xiwg15cckipw6yxjyx0sivc"; depends=[]; }; - GCD = derive2 { name="GCD"; version="4.0.2"; sha256="1gb3qhqa212vy85qscnfssvb4rk8fq5j6zs779jq9c6jzvlfv6wb"; depends=[]; }; + GCD = derive2 { name="GCD"; version="4.0.3"; sha256="0c1l1xz0jjjib5cqszq6rg3rh19441npjgy6xnvlrhddjyihhrs4"; depends=[]; }; GCPM = derive2 { name="GCPM"; version="1.2.2"; sha256="0k2ng78bk3bxpj6nz80j5cvjd56zjz328ga68vyyc3hvdjgpspqj"; depends=[Rcpp RcppProgress]; }; - GCalignR = derive2 { name="GCalignR"; version="1.0.1"; sha256="1p1zxf5s75ckyj7a61n43ix314p3b99knyg6z5d4sn5n417h2m42"; depends=[ggplot2 pbapply readr reshape2 stringr]; }; + GCalignR = derive2 { name="GCalignR"; version="1.0.2"; sha256="1x0as6mmapvn3a28c3qk3wd5gjkx17xgf9c7yb68wp3lj8pknsnm"; depends=[ggplot2 pbapply readr reshape2 stringr]; }; GD = derive2 { name="GD"; version="1.6"; sha256="1rlgr4z4ibz5m8m18mw11bqcbbvfjxw2mljg78jp0lb294zh1kbb"; depends=[BAMMtools ggplot2 reshape2]; }; GDAdata = derive2 { name="GDAdata"; version="0.93"; sha256="13ks97i289rc4i7gpqrifwbj0m9rx8csjhnfg8mad10qmjwz7p8b"; depends=[]; }; GDAtools = derive2 { name="GDAtools"; version="1.4"; sha256="1i5g7gzl3fkhwxqizqwrn8098s5lrr0mk17wmpyf92s1sy315cpv"; depends=[FactoMineR nleqslv nnet]; }; @@ -1295,7 +1349,8 @@ in with self; { GDINA = derive2 { name="GDINA"; version="2.1.15"; sha256="1cndib7frd40199l8zijspnidwig9jvhhk3s5dbbhlgxswq6idsz"; depends=[alabama ggplot2 MASS nloptr numDeriv Rcpp RcppArmadillo Rsolnp shiny shinydashboard]; }; GEEaSPU = derive2 { name="GEEaSPU"; version="1.0.2"; sha256="02pwjqd94kranc1f69bx9rzk27kchavhvhl9fygjhrr40nwq3pbg"; depends=[gee Rcpp RcppArmadillo]; }; GEEmediate = derive2 { name="GEEmediate"; version="1.1.1"; sha256="1akgl4j38x4qf3z9d6z7cgjd7x9f0k3lrzyrzgykqhrzmbh68z2m"; depends=[gee]; }; - GENEAread = derive2 { name="GENEAread"; version="2.0.2"; sha256="0nkza3srfa67mmxnvhhq2wg3zm7ij73r7rpgssjaaijcxqm7qyvl"; depends=[bitops GGIR mmap]; }; + GENEAclassify = derive2 { name="GENEAclassify"; version="1.4.14"; sha256="0z2lf0pgkwhrqq6a8gpjga3k3kf1iv8zkwma3g6kghqp1sjr9yr7"; depends=[changepoint GENEAread MASS rpart signal]; }; + GENEAread = derive2 { name="GENEAread"; version="2.0.5"; sha256="0xm4cf0a5nfdj8qxb9ylzgk2dals9rwggk2w6aaryn8r8v4fl9vp"; depends=[bitops GGIR mmap]; }; GENLIB = derive2 { name="GENLIB"; version="1.0.6"; sha256="0xyq3ggi814vi3x5kxffhi7ygvzcfj3pg0kfi7whcjpi3pjg05h8"; depends=[bootstrap doParallel foreach kinship2 lattice Matrix quadprog Rcpp]; }; GEOmap = derive2 { name="GEOmap"; version="2.4-4"; sha256="0wk2v0fwcwcm59k711fg829h2w58wkd36im4mg974iai6mqif7qh"; depends=[fields MBA RPMG splancs]; }; GERGM = derive2 { name="GERGM"; version="0.13.0"; sha256="1h3fzkgc553bvxhcmvmlgk9sdais186h4gs1qagdihwpwn8ymbjk"; depends=[BH coda ggplot2 igraph matrixcalc plyr Rcpp RcppArmadillo RcppParallel scales slackr stringr vegan]; }; @@ -1306,16 +1361,17 @@ in with self; { GEint = derive2 { name="GEint"; version="0.1.4"; sha256="0xwp8hqds4lf6nb8hcbvsj2000w7f90bi62b1v3iry0y6cbpwbjg"; depends=[bindata geepack mvtnorm nleqslv pracma rje speedglm]; }; GExMap = derive2 { name="GExMap"; version="1.1.3"; sha256="1a6i2z9ndgia4v96nkr77cjqnbgxigqbqlibg82gwa0a6pl7r7nz"; depends=[Biobase multtest]; }; GFA = derive2 { name="GFA"; version="1.0.3"; sha256="10sivsqxliwcrp0ay3n2my28zki6f8vpv8i9lbld8qinx1iv2mq3"; depends=[]; }; - GFD = derive2 { name="GFD"; version="0.2.5"; sha256="14bhqk5hi9w2078nn382ksgw37bx5r1jadizcrwbisglccxa0ncd"; depends=[magic MASS Matrix plotrix plyr]; }; + GFD = derive2 { name="GFD"; version="0.2.6"; sha256="1z98j6nvaa4vrh840q1iy5r0h9ns4xbrk3qfkq51l2kmbrck8r7a"; depends=[magic MASS Matrix plotrix plyr]; }; + GFE = derive2 { name="GFE"; version="0.1.0"; sha256="0ywrg23z13kp8ggw4wbm4jvr2rvb6kra7ma0mgfj8xzkrxs6vi6m"; depends=[data_table dplyr TeachingSampling]; }; GFGM_copula = derive2 { name="GFGM.copula"; version="1.0.3"; sha256="0pqx5fr039izhwi2kdzq9v6nlviyjclzddd092g8mkadj36diwk5"; depends=[cmprsk compound_Cox joint_Cox]; }; GFORCE = derive2 { name="GFORCE"; version="0.1.2"; sha256="1bxc0id3vivva4d62h468vv4zrvjgzh91mlm97ga9qnlhd1r20wr"; depends=[lpSolve MASS]; }; GGEBiplotGUI = derive2 { name="GGEBiplotGUI"; version="1.0-9"; sha256="0nd0ky3m1avy82z48g7hcysq0y0agxjxdn0g624dkm2w99avxw3j"; depends=[rgl tkrplot]; }; GGEBiplots = derive2 { name="GGEBiplots"; version="0.1.1"; sha256="1xnxaylikjd378flw3rqw36z27b2limkmyad97zhf1cbva317d1b"; depends=[gge GGEBiplotGUI ggforce ggplot2 scales]; }; - GGIR = derive2 { name="GGIR"; version="1.5-23"; sha256="06bz8zlw3b2m1lb884jcbh935wxjri8hsa25aw4x7h3n70sgza25"; depends=[data_table Rcpp]; }; + GGIR = derive2 { name="GGIR"; version="1.6-7"; sha256="1kwrynyb0r6y9vdsdv1s75pg1v2q4lj10dvvwbdk4sy3m8z7dhsv"; depends=[data_table Rcpp]; }; GGMM = derive2 { name="GGMM"; version="1.0.0"; sha256="18haggjagp0bwy451ghz18nbjgp8zdw1m9iavjj38s57igs611n4"; depends=[equSA huge mvtnorm]; }; GGMridge = derive2 { name="GGMridge"; version="1.1"; sha256="0zbfvvp7l836m118m8nmdvw1w7xq6d3b7qirskjsq1dkk23j41hs"; depends=[MASS mvtnorm]; }; GGMselect = derive2 { name="GGMselect"; version="0.1-12.1"; sha256="0nrkbai9jps54ldx3cvwd4x4wingfj73najwx4bv98z8zxpbnky5"; depends=[gtools lars mvtnorm]; }; - GGUM = derive2 { name="GGUM"; version="0.3.2"; sha256="0kkdg8d4ib862v6y9xjczh4v52fzzcv5c31hdf44jw4lc7npwc82"; depends=[abind psych Rdpack viridis xlsx]; }; + GGUM = derive2 { name="GGUM"; version="0.3.3"; sha256="1ndqm4wal2xp9sdhj0aj8828ygm2g4fx23cpnlmg3vjz4m2mjc1r"; depends=[abind psych Rdpack viridis xlsx]; }; GGally = derive2 { name="GGally"; version="1.4.0"; sha256="1zjmcc5bzagvy7c5cmdcl39xmx07fwi98yrj4i05w7y40kqcsiws"; depends=[ggplot2 gtable plyr progress RColorBrewer reshape rlang]; }; GHQp = derive2 { name="GHQp"; version="1.0"; sha256="0qpcpwv7rz67qhz1p5k2im02jvs7l8z9sa6ypz13hig5fzm8j9bp"; depends=[statmod]; }; GHap = derive2 { name="GHap"; version="1.2.2"; sha256="1qwv4llcixklr9d6lq4ljzbs8al80xnvqkcajnh8dbf3axmlmr5b"; depends=[bigmemory lme4 Matrix]; }; @@ -1327,7 +1383,7 @@ in with self; { GLDreg = derive2 { name="GLDreg"; version="1.0.7"; sha256="1wjrr4x1k0fz8nx9idb4ysamldypriiypj96b5v028lx38jwsk3l"; depends=[ddst GLDEX]; }; GLIDE = derive2 { name="GLIDE"; version="1.0.1"; sha256="02pmn0ydrmblgchz189avlrz3zaz0qfhy75d945yphpmvjf9f9m5"; depends=[doParallel foreach MASS]; }; GLMMRR = derive2 { name="GLMMRR"; version="0.2.0"; sha256="0s3jfh720acfmbadilq2c6gql3yifsbijpmw1jkzbsdc87pqi1db"; depends=[lattice lme4]; }; - GLMMadaptive = derive2 { name="GLMMadaptive"; version="0.2-0"; sha256="06ppv7clwqd817aas9dkq1ry8vz9rbss5rdgwzc65y715r0y906k"; depends=[MASS nlme]; }; + GLMMadaptive = derive2 { name="GLMMadaptive"; version="0.3-0"; sha256="0447j35a5nq3v6fkcynmrxvxqlry51b6fx05dwrdncbnq3sm5f6j"; depends=[MASS nlme]; }; GLMaSPU = derive2 { name="GLMaSPU"; version="1.0"; sha256="0zx2bza5v5cfp9v7hf42s57522b6prawcwl77aa3kvjcnb0ish6g"; depends=[MASS mnormt mvtnorm Rcpp RcppArmadillo]; }; GLMsData = derive2 { name="GLMsData"; version="1.0.0"; sha256="12q41zxniblzys20vjrf5skj8cbzlwb92mwk6jvnyd86lc70bsh1"; depends=[]; }; GLSME = derive2 { name="GLSME"; version="1.0.4"; sha256="1bh56dv4czl89dm9b6syfpsbds4wni03d5vamvjbp6wblhysxnpm"; depends=[corpcor mvtnorm]; }; @@ -1336,47 +1392,47 @@ in with self; { GMDH = derive2 { name="GMDH"; version="1.6"; sha256="093glyz73246m5f2xb2xgbgi80haj4fanmr325byr99dnf4x35yn"; depends=[MASS]; }; GMDH2 = derive2 { name="GMDH2"; version="1.4"; sha256="13vbzqxmqvp39rbxw41nqfrmk0w6w8qc9nzgfbfpc07h3gcwva41"; depends=[e1071 glmnet magrittr MASS nnet plotly randomForest xtable]; }; GMMBoost = derive2 { name="GMMBoost"; version="1.1.2"; sha256="01q165vkdiv4qh96lha0g2g94jpnzdclbby6q43ghh9j1yrd4qzj"; depends=[magic minqa]; }; - GMSE = derive2 { name="GMSE"; version="0.4.0.4"; sha256="14m4rygb24k4prkiqsqv3w5v0gv98pqpqdmgimk5wi33npxy2c2b"; depends=[shiny shinydashboard shinyjs]; }; - GNE = derive2 { name="GNE"; version="0.99-1"; sha256="1avsl54xdlqq8pw16g84igcwms7if7lvdblqvfc2cn3sk8qi5xdv"; depends=[alabama BB nleqslv SQUAREM]; }; + GMSE = derive2 { name="GMSE"; version="0.4.0.7"; sha256="00fws183mndi2zdfkcsdki3nbd983y9g35fgxkacjck9mpn48an3"; depends=[shiny shinydashboard shinyjs]; }; + GNAR = derive2 { name="GNAR"; version="0.2.7"; sha256="1rxx13a3yzl8g4024d3vwxf86ssjjsa3dh6bqzxqyv0fxd85aiaj"; depends=[igraph]; }; + GNE = derive2 { name="GNE"; version="0.99-2"; sha256="16mivsa4r8d2cg5qsh5rpg2244f74zk2ln3vbys7ivjgnjpjn7z8"; depends=[alabama BB nleqslv SQUAREM]; }; GOGANPA = derive2 { name="GOGANPA"; version="1.0"; sha256="1xbir21zvr5hv2y6nndzpsrpmnr7glrc7y6xgcyb856wx46ajan9"; depends=[GANPA WGCNA]; }; GORCure = derive2 { name="GORCure"; version="2.0"; sha256="1hazin0q74hf16azxa5h08kfj7g1079q77n2fn4fahpfxb8hmvwm"; depends=[ICsurv MASS pracma survival]; }; GOplot = derive2 { name="GOplot"; version="1.0.2"; sha256="1y8dv0kbzpr9za91njw0x233vx5d13vqml9hmpddcyi9s6va5nix"; depends=[ggdendro ggplot2 gridExtra RColorBrewer]; }; GPArotation = derive2 { name="GPArotation"; version="2014.11-1"; sha256="15jh5qqqwx47ara6glilzha87rnih0hs5fsz0jjqwv6wr1gw26rm"; depends=[]; }; GPB = derive2 { name="GPB"; version="1.0"; sha256="18cdgz00j0j1rchzn2l253rii3b0iv9ipnh5sk3yvmwrqiabmrf8"; depends=[]; }; - GPCMlasso = derive2 { name="GPCMlasso"; version="0.1-1"; sha256="1qlbs9xxdn7q90afh5zc6fgp213fxyh3xmmhz5dm6azbwx92x3la"; depends=[car caret cubature ltm mirt mvtnorm Rcpp RcppArmadillo statmod TeachingDemos wordcloud]; }; + GPCMlasso = derive2 { name="GPCMlasso"; version="0.1-2"; sha256="03xa68aydlgah7y922k9i07qwwz0ygzidrc3xl0iylcwbwcanifd"; depends=[caret cubature ltm mirt mvtnorm Rcpp RcppArmadillo statmod TeachingDemos]; }; GPCSIV = derive2 { name="GPCSIV"; version="0.1.0"; sha256="118l792mwd54xsi3g8afg3vc6wds8j6fyaz3mwmq04mlcyblym4l"; depends=[scatterplot3d sqldf]; }; GPFDA = derive2 { name="GPFDA"; version="2.2"; sha256="1xqk03g8b8hi1vdqh6a9wml8ln0ad6lmy14z8k8c4wdc5kbzdr0b"; depends=[fda fda_usc MASS spam]; }; GPGame = derive2 { name="GPGame"; version="1.1.0"; sha256="00qiqd7p84k22wbmlmj8a81fy5m5rl6afhj2q61j0akicnbzjfw9"; depends=[DiceDesign DiceKriging GPareto KrigInv MASS mnormt mvtnorm Rcpp]; }; GPLTR = derive2 { name="GPLTR"; version="1.2"; sha256="0b4s090jlp2qpqqr0b1ifwyf2fal156y7vg9mjkw53y623ms5pix"; depends=[rpart]; }; - GPM = derive2 { name="GPM"; version="1.0.1"; sha256="0sqr2s9wcqh2giyslvkgprn22b4aigalx2dd9y57lz7kfljvril7"; depends=[lattice lhs randtoolbox]; }; - GPPFourier = derive2 { name="GPPFourier"; version="2.1"; sha256="1wlzpiqlg5zx3rv29l1ql3apcaykvk72zc0anwxr152qlk910l2q"; depends=[mFilter Tides]; }; + GPM = derive2 { name="GPM"; version="1.0.2"; sha256="0b7431fapg09xad8rc3b9vwrs55ja24yv12kfxb2y65gij940ms7"; depends=[lattice lhs randtoolbox]; }; + GPRMortality = derive2 { name="GPRMortality"; version="0.1.0"; sha256="0k5pfyl7r5vsac927aqx19lz93vyk5l3ydqkazn2hwwaw1lh2wav"; depends=[rstan]; }; GPareto = derive2 { name="GPareto"; version="1.1.1"; sha256="100r7v7vdkd8i8asb8fnz86rgmkd9kd5bnrc7kdzndfg6jsyycrg"; depends=[DiceDesign DiceKriging emoa KrigInv ks MASS pbivnorm pso randtoolbox Rcpp rgenoud rgl]; }; GPfit = derive2 { name="GPfit"; version="1.0-0"; sha256="0g0g343ncqsqh88qq9qrf4xv5n3sa980kqbvklcx534dmn6a7n2i"; depends=[lattice lhs]; }; - GPoM = derive2 { name="GPoM"; version="1.1"; sha256="0n1fnmwiygispihqgcx762wkvp28pnm8kcwlx9vxhpafswsp112q"; depends=[deSolve rgl]; }; - GPrank = derive2 { name="GPrank"; version="0.1.3"; sha256="118v08kyp0s8j24cmfyyzj8klgd4g3jqi1x5l76w1iznnlpyd6kf"; depends=[gptk matrixStats RColorBrewer tigreBrowserWriter]; }; + GPoM = derive2 { name="GPoM"; version="1.2"; sha256="1hhwdpish8j3j9y5q6r5pdsl1kpbwp1hjhcq24iiz4lfssib4k9f"; depends=[deSolve rgl]; }; + GPrank = derive2 { name="GPrank"; version="0.1.4"; sha256="06j5fk427jkp5lphqlx48vfp4fagnxxnv4iyjcha8nvkswcblwgy"; depends=[gptk matrixStats RColorBrewer tigreBrowserWriter]; }; GPvam = derive2 { name="GPvam"; version="3.0-5"; sha256="0inhhx5ll4ybkwp71ijigxlyxsa0rdyxb38kgfgxb588dsk4scjz"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; GRANBase = derive2 { name="GRANBase"; version="2.5.0"; sha256="1sc7f47dnrwww89v4n8y41zvc9z8i8lv7qgya6nwf98vh9b6ifmi"; depends=[covr dplyr GRANCore htmlTable jsonlite markdown RCurl sendmailR stringi switchr]; }; GRANCore = derive2 { name="GRANCore"; version="0.2.2"; sha256="0f4w5nyqnfq20apqrc7harg4capxrr648wfbgghdg18j3gh3spdc"; depends=[switchr]; }; GRAPE = derive2 { name="GRAPE"; version="0.1.0"; sha256="0kcyz8x6yzq83hcwdlx7yw5jpww819f9d1hax19vn31ccq71xkyw"; depends=[]; }; GRCdata = derive2 { name="GRCdata"; version="1.0"; sha256="0nshii6kfvffncgcrmm7wvniq94j9djj84jikcb6ck49viikkrky"; depends=[cubature nloptr]; }; - GREP2 = derive2 { name="GREP2"; version="1.0.0"; sha256="1nzy8v4xjvaw5zsmbfxljfmy78njd3mw7rkgh6k6c0mf30mrb51i"; depends=[AnnotationDbi Biobase EnsDb_Hsapiens_v86 EnsDb_Mmusculus_v79 EnsDb_Rnorvegicus_v79 GenomicFeatures GEOquery org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db RCurl rentrez tximport XML]; }; - GROAN = derive2 { name="GROAN"; version="1.1.0"; sha256="06xcbdcg3rmb9939d9ansy75jn0axy0c36rmgjhcji8gf959kmyz"; depends=[plyr rrBLUP]; }; + GREP2 = derive2 { name="GREP2"; version="1.0.1"; sha256="0sr7r6c4xnhwdq4j1v3frzc063hhghinx8dl952li5cy8rqk8ga5"; depends=[AnnotationDbi Biobase EnsDb_Hsapiens_v86 EnsDb_Mmusculus_v79 EnsDb_Rnorvegicus_v79 GenomicFeatures GEOquery org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db RCurl rentrez tximport XML]; }; + GROAN = derive2 { name="GROAN"; version="1.2.0"; sha256="14n3k1wwz5pn82wcj00cdns4bp699f58k1nj8hp8jn0q7xr2sgv5"; depends=[plyr rrBLUP]; }; GRS_test = derive2 { name="GRS.test"; version="1.1"; sha256="1ap9453rj5zan6c3ix7jb1qxhxh42bfv295dgqbgjpdygjdlbm6n"; depends=[]; }; GRTo = derive2 { name="GRTo"; version="1.3"; sha256="1xkcx2agvrpfnmplgaqx70vz303v8rhwnxdyr4hmdlf4h92lbv8i"; depends=[bootstrap]; }; GSA = derive2 { name="GSA"; version="1.03"; sha256="1h1sbpn1rrdh44w4fx2avc7x24ba40mvpd8b2x5wfrc7a294zf6z"; depends=[]; }; GSAQ = derive2 { name="GSAQ"; version="1.0"; sha256="1p1rab2dlh4h9bfg464nhx708p7kc4q01ifccdh5756lq1qh2kzv"; depends=[]; }; GSAfisherCombined = derive2 { name="GSAfisherCombined"; version="1.0"; sha256="1xhq5nc3kbz3ml9qkdxm6m0c65fybabfhgqlwii2105jl0ll7qy5"; depends=[]; }; GSAgm = derive2 { name="GSAgm"; version="1.0"; sha256="18bhk67rpss6gg1ncaj0nrz0wbfxv7kvy1cxria083vi60z0vwbb"; depends=[edgeR survival]; }; - GSCAD = derive2 { name="GSCAD"; version="0.1.0"; sha256="0a5smd1prfi6n58ghhz5v81p88v3cnmk2v6r0nn9gy7sa1r2z8xc"; depends=[fields Matrix Rcpp RcppArmadillo]; }; GSE = derive2 { name="GSE"; version="4.1"; sha256="00pvpramk7n3195i3vkmp982igyc1b0xzjqs7xdsvzsnfv7kpcbh"; depends=[cellWise ggplot2 MASS Rcpp RcppArmadillo robustbase rrcov]; }; - GSED = derive2 { name="GSED"; version="1.7"; sha256="1w8kim7qfrx28bx4l4qkfghwysmyhm7xa0pjagvrh5ar35m4ga67"; depends=[memoise rootSolve survival]; }; + GSED = derive2 { name="GSED"; version="1.10"; sha256="1i3xrf01620m7vwa9kpzl620kxh60yhsbxyshna4kkv6d68i9fzy"; depends=[memoise rootSolve survival]; }; GSIF = derive2 { name="GSIF"; version="0.5-4"; sha256="1vh3dffi5hakk32rwaabw9k34wigd0n5bhzcyqhadl6fxjsaz6b6"; depends=[aqp dismo gstat plotKML plyr raster rgdal RSAGA scales sp]; }; GSM = derive2 { name="GSM"; version="1.3.2"; sha256="04xjs9w4gaszwzxmsr7657ry2ywa9pvpwpczpvinxi8vpj347jbb"; depends=[gtools]; }; GSMX = derive2 { name="GSMX"; version="1.3"; sha256="1n1d7rixj14ari46snsmi48qfmy00ihmzvayk3hkrp2d2d0xi2gh"; depends=[MASS]; }; - GSODR = derive2 { name="GSODR"; version="1.2.1"; sha256="0nmr5pmwxmriaf16r39hs85g2qfzz3k176klgvlmp4shg4ln2p64"; depends=[curl dplyr magrittr purrr R_utils readr rlang tibble]; }; + GSODR = derive2 { name="GSODR"; version="1.2.3"; sha256="12fa4grgar7b8pxr1jjqrjbzmil0dwn04mq5dawj86v6g65xnky9"; depends=[curl dplyr magrittr purrr R_utils readr rlang tibble]; }; GSSE = derive2 { name="GSSE"; version="0.1"; sha256="034mmxa6kjq5kgikhb5q75viagz5ck9irrjbxm26zq9099qxm13b"; depends=[Iso zoo]; }; GSparO = derive2 { name="GSparO"; version="1.0"; sha256="0xna2crxqwy8fj0s79rxbdcaz9x912rp1vdwqv1557fsnmfv2yf0"; depends=[ggplot2 ThreeWay]; }; - GUIDE = derive2 { name="GUIDE"; version="1.2.3.1"; sha256="02chn2mzh6smmiv8rp00cq5rff18bqszazbk8svmvvlgn0a25pj4"; depends=[rpanel tkrplot]; }; + GUIDE = derive2 { name="GUIDE"; version="1.2.7"; sha256="0klaczmn3jnlzyh45yaqlc897irjfk467f4w03awmflaiwan3h6v"; depends=[rpanel tkrplot]; }; GUILDS = derive2 { name="GUILDS"; version="1.3"; sha256="0zl6x0vn93ybps63fqazvd93f2zwdq0rqqrp7d6n5rnamx99mm8d"; depends=[pracma Rcpp]; }; GUIProfiler = derive2 { name="GUIProfiler"; version="2.0.1"; sha256="10m4d7f2rhw6cmkrnw3jh4iqlkfphf4v7mpfwzw17laq0ncmsx5r"; depends=[graph MASS Nozzle_R1 proftools Rgraphviz rstudioapi]; }; GUIgems = derive2 { name="GUIgems"; version="0.1"; sha256="0lmx8hw0496vk437p32l933cdb4vpi94f4kz58x20jj07c20maz6"; depends=[ggplot2 igraph MASS msm plyr rpanel stringr]; }; @@ -1384,12 +1440,12 @@ in with self; { GUniFrac = derive2 { name="GUniFrac"; version="1.1"; sha256="1vgij7c9b0afl5wzwcn0pjdvn8gqz2jxk5q0gchd9zk1qd10a1vl"; depends=[ape matrixStats vegan]; }; GWAF = derive2 { name="GWAF"; version="2.2"; sha256="11lk1dy24y1d0biihy2aypdvlx569lw1pfjs51m54rhgpwzkw6yd"; depends=[coxme geepack lme4]; }; GWASExactHW = derive2 { name="GWASExactHW"; version="1.01"; sha256="19qmk8h7kxmn9kzw0x4xns5p3qqz27xkqq4q6zmh4jzizd0fsl78"; depends=[]; }; - GWASinlps = derive2 { name="GWASinlps"; version="1.1"; sha256="1041yb5zn27a9srylmawj2kbkcsjz65x0apa413wyb32pz73l6ni"; depends=[horseshoe mombf]; }; + GWASinlps = derive2 { name="GWASinlps"; version="1.2"; sha256="036lv8f58kz6qdwaviyk1q1qsgcj9cimipq1cjrfpn8snkn7s1gh"; depends=[horseshoe mombf speedglm]; }; GWG = derive2 { name="GWG"; version="1.0"; sha256="1va0cd229dhhi1lmrkpwapcm96hrdmxilrmba02xnl7ikhisw0my"; depends=[]; }; GWLelast = derive2 { name="GWLelast"; version="1.2.1"; sha256="1g6xmw93jl9cv3c7p76wk3lq8qhqxgjhmn1cgiyyy5jbf14gbasv"; depends=[doParallel foreach geosphere glmnet sp spgwr]; }; GWRM = derive2 { name="GWRM"; version="2.1.0.3"; sha256="16ahlf1pbcpgha50a7ml2c336by50r287kihwshiazshifi5p3n3"; depends=[doParallel foreach]; }; GWSDAT = derive2 { name="GWSDAT"; version="3.0.1"; sha256="1v93fbbpmbcigi1m9vyzrgcbnrrpgh7h963vicwy9ilzc06vhm68"; depends=[deldir digest geometry Kendall lattice MASS Matrix officer readxl rhandsontable sf shiny shinycssloaders shinydashboard shinyjs sm sp splancs zoo]; }; - GWmodel = derive2 { name="GWmodel"; version="2.0-5"; sha256="1v0a2fxs1nfm84vrggj1zmbij6kqzc5mgmqlvrh80hj3w87zpiry"; depends=[maptools Rcpp RcppArmadillo robustbase sp spdep]; }; + GWmodel = derive2 { name="GWmodel"; version="2.0-6"; sha256="04im9va0imj8wsl5fzjw7jx7xxvwdr71wqj2m5ar2x3c1k91k2na"; depends=[maptools Rcpp RcppArmadillo robustbase sp spacetime spdep]; }; GWsignif = derive2 { name="GWsignif"; version="1.2"; sha256="0bss5s3ijnlckz44p7jj49bn2r8nwqckpzwzcv0vci915q8jfsj2"; depends=[]; }; GaDiFPT = derive2 { name="GaDiFPT"; version="1.0"; sha256="15fnj1w30h0zdj032f3js0bbb1qlyk4b54a4aclykwzicqdgalkg"; depends=[]; }; GameTheory = derive2 { name="GameTheory"; version="2.7"; sha256="0vb7sjia5s58gw9zpkzddps8knxvbrz7fbi3m6digl8bf5vwhxxw"; depends=[combinat gtools ineq kappalab lpSolveAPI]; }; @@ -1398,7 +1454,7 @@ in with self; { GauPro = derive2 { name="GauPro"; version="0.2.2"; sha256="127agnhqbbavcf7sx0zq1c8ldh3w1d1iz5bpd1ixxkyaapmiq4qy"; depends=[lbfgs R6 Rcpp RcppArmadillo]; }; GeDS = derive2 { name="GeDS"; version="0.1.3"; sha256="1ddq4hnyl3m3s4cchccxiqphi742ljcm86zqpa01a5nrjbnr87x6"; depends=[Matrix Rcpp Rmpfr]; }; GeNetIt = derive2 { name="GeNetIt"; version="0.1-1"; sha256="1xjz22m4yn642m0bqa33w4m2rygpxjwg43c54lw168jck9zzgv1f"; depends=[nlme raster rgeos sp spatialEco spdep]; }; - GenAlgo = derive2 { name="GenAlgo"; version="2.1.4"; sha256="1mgdvzc5dd7d1wlk8c7d8gd9b2di16mjmyd2i3am05jfw3q26ahv"; depends=[ClassDiscovery MASS oompaBase]; }; + GenAlgo = derive2 { name="GenAlgo"; version="2.1.5"; sha256="0d3y9kc2njsbzdngv67d4qrdsnn7nsxph5acc09vmwxpv1cyhxiw"; depends=[ClassDiscovery MASS oompaBase]; }; GenBinomApps = derive2 { name="GenBinomApps"; version="1.0-2"; sha256="1ps1rq8cjlwh658mysdh3xbn5fihanzcwxb38xvg4031vnwv80in"; depends=[]; }; GenForImp = derive2 { name="GenForImp"; version="1.0"; sha256="1wcvi52fclcm6kknbjh4r9bpkc2rg8nk6cddnf5j8zqbvrwf4k5x"; depends=[mvtnorm sn]; }; GenKern = derive2 { name="GenKern"; version="1.2-60"; sha256="12qmd9ydizl7h178ndn25i4xscjnrssl5k7bifwv94m0wrgj4x6c"; depends=[KernSmooth]; }; @@ -1416,6 +1472,7 @@ in with self; { GeneticSubsetter = derive2 { name="GeneticSubsetter"; version="0.8"; sha256="0bd4snv3dwabc7mknmd2rjmffj67xq535x0bycajhd83d1jhjars"; depends=[]; }; GenomicMating = derive2 { name="GenomicMating"; version="2.0"; sha256="02v1pkarmardf7g8hf2n4jj4cq4707g5lcc7gnwsiyyh7pknd1y6"; depends=[dplyr emoa kohonen LowRankQP magrittr plotly qtl Rcpp RcppArmadillo scatterplot3d SOMbrero]; }; GenomicTools = derive2 { name="GenomicTools"; version="0.2.6"; sha256="19illcfcm34vr90kh4cbdwf7k8hy700dlzylsaicv3h4xi7iydgs"; depends=[circlize data_table gMWT Rcpp RcppArmadillo snpStats stringr]; }; + GenomicTools_fileHandler = derive2 { name="GenomicTools.fileHandler"; version="0.1.2"; sha256="1snv2z95v7lyvzpssjsjpy4163k6imfjbb0svm8icsb85mpyj7af"; depends=[data_table snpStats]; }; GeoBoxplot = derive2 { name="GeoBoxplot"; version="1.0"; sha256="164dh49ac3fx38fdglv32lmz92ca8jdd98cbhz6mxsk8r0jcladw"; depends=[]; }; GeoDE = derive2 { name="GeoDE"; version="1.0"; sha256="0wawkzj0344pprm8g884d7by8v74iw96b109rgm7anal48fl30im"; depends=[MASS Matrix]; }; GeoGenetix = derive2 { name="GeoGenetix"; version="0.0.2"; sha256="0rrc8rdf6whpd830s2g9ybz82jcd0il9kkfrjh3xza3b86fasdvg"; depends=[RandomFields]; }; @@ -1424,24 +1481,26 @@ in with self; { GeoRange = derive2 { name="GeoRange"; version="0.1.0"; sha256="0krj9570wkhdvpaqkq3nf0maglqd44mpwn4v1bymvgpk1i1wf5p3"; depends=[moments proj4 raster sp velociraptr]; }; GeomComb = derive2 { name="GeomComb"; version="1.0"; sha256="05xb6m2ciszxd13yhqdkildh9nsq19ss8885ngj6ynvbchqkii7r"; depends=[forecast ForecastCombinations ggplot2 Matrix mtsdi psych]; }; GerminaR = derive2 { name="GerminaR"; version="1.2"; sha256="10x22xl3r93i5mc6w7m5mqm3z386dsffwrb8h9c1bznrnynnsy63"; depends=[agricolae assertthat dplyr DT ggplot2 gsheet gtools magrittr readxl shiny shinydashboard tibble tidyr]; }; - GetDFPData = derive2 { name="GetDFPData"; version="0.7"; sha256="0c8cdx0hgcnrsppmq7vk70ivhczlb4blqfghqb9rni295r3hzd47"; depends=[curl dplyr readr reshape2 stringr tibble xlsx XML]; }; - GetHFData = derive2 { name="GetHFData"; version="1.5"; sha256="1lm2k37y86fn45hhvyswj60dql0m33kia0wirs3zc981s4nsxp0i"; depends=[curl dplyr lubridate RCurl readr stringr]; }; + GetDFPData = derive2 { name="GetDFPData"; version="1.2"; sha256="1v87xln890rvgklylziarqp3d4qwkppa9m54v2n9a6cbrfs4v3v9"; depends=[curl dplyr readr reshape2 stringr tibble xlsx XML]; }; + GetHFData = derive2 { name="GetHFData"; version="1.6"; sha256="1yhj97ag817jd2qzfbk363vmy4qpv1p6343krm3z0c9wjp2i97n5"; depends=[curl dplyr lubridate RCurl readr stringr]; }; GetITRData = derive2 { name="GetITRData"; version="0.7"; sha256="0cmqbncd5bjxgb1r9yvdv2hkx4qdmnpn2a62bgndnaya1yk5050l"; depends=[curl dplyr readr reshape2 stringr tibble xlsx XML]; }; - GetLattesData = derive2 { name="GetLattesData"; version="0.9"; sha256="1rqhs8039m3ar76nail7gavw6678zs20r9dg98rp5igqx5jjys73"; depends=[curl dplyr readr stringdist stringr XML]; }; + GetLattesData = derive2 { name="GetLattesData"; version="1.2"; sha256="0mwbyb3wk2l4nrzx4n6gbx4h4a1fz7p8kmysbihysdlz8brnr0av"; depends=[curl dplyr readr stringdist stringr XML]; }; GetR = derive2 { name="GetR"; version="0.1"; sha256="1b2wirhz4nhvmf863czwb8z8b42ilsyjjrg9rc4nd9b7nz50bmjg"; depends=[party]; }; GetTDData = derive2 { name="GetTDData"; version="1.3.1"; sha256="1a8f22nxs85g2zznh1ma37lmycypg8f7d5kdhyb5vrirvrpi5p05"; depends=[bizdays curl RCurl readxl stringi stringr tidyr XML]; }; GetoptLong = derive2 { name="GetoptLong"; version="0.1.7"; sha256="1fl3w2n602ldybc5qj7qw4xmzzb804bsjkqwf6dswzj0vf0qiadr"; depends=[GlobalOptions rjson]; }; GiNA = derive2 { name="GiNA"; version="1.0.1"; sha256="0his7wsgnggyv9526blxzxa1ni8hwq2ws64wkmha45nvvnm3dsiw"; depends=[doParallel EBImage foreach png]; }; GiRaF = derive2 { name="GiRaF"; version="1.0"; sha256="02356cq0g6v5m72fy5z83bw3nsb7kpc9sy7sykk97735n928z92n"; depends=[BH Rcpp RcppArmadillo]; }; GibbsACOV = derive2 { name="GibbsACOV"; version="1.1"; sha256="1ikcdsf72sn1zgk527zmxw3zjhx0yvkal6dv001cgkv202842kll"; depends=[MASS]; }; + Gifi = derive2 { name="Gifi"; version="0.3-8"; sha256="04kprdfh74gyc5p8x6ycgv2m6gm47imhf3v4vlxgqj3lmjm2vxp0"; depends=[colorspace]; }; GillespieSSA = derive2 { name="GillespieSSA"; version="0.5-4"; sha256="0bs16g8vm9yrv74g94lj8fdfmf1rjj0f04lcnaya7gyak3jhk36q"; depends=[]; }; GiniWegNeg = derive2 { name="GiniWegNeg"; version="1.0.1"; sha256="1wqwjalsyp55si839cil6na3khigm0mwn6qkg0kjylq10pabfk2a"; depends=[]; }; Giza = derive2 { name="Giza"; version="1.0"; sha256="13nkm8mk1v7s85kmp6psvnr1v97vi0gid8rsqyq3x6046pyl5z6v"; depends=[lattice reshape]; }; GlobalDeviance = derive2 { name="GlobalDeviance"; version="0.4"; sha256="0s318arq2kmn8fh0rd5hd1h9wmadr9q8yw8ramsjzvdc41bxqq1a"; depends=[snowfall]; }; GlobalFit = derive2 { name="GlobalFit"; version="1.2"; sha256="01s51nxcsl8xxn6khbv5jsvpwblwf0iamvr477a1rraqqqj94zx0"; depends=[sybil]; }; GlobalOptions = derive2 { name="GlobalOptions"; version="0.1.0"; sha256="1wlyqz1yhmhjwslrd7q69jbd9vsbjkjfc01g60kl3cdpyr8hlyjn"; depends=[]; }; + GmAMisc = derive2 { name="GmAMisc"; version="1.0.0"; sha256="14rs13y509hijg4ars3j55fm0133487alm8b9jlffbz8qiln48g4"; depends=[caTools classInt cluster coin corrplot DescTools dismo ggplot2 ggrepel gridExtra Hmisc InPosition kimisc lsr maptools plyr pROC raster RcmdrMisc rgdal rgeos rworldmap shape sp spatialEco spatstat]; }; Gmedian = derive2 { name="Gmedian"; version="1.2.4"; sha256="0lr1hwprqy9mq5qyp83qqxj8dh5sy487xkqbv2y1qdinzj62pvcn"; depends=[Rcpp RcppArmadillo robustbase RSpectra]; }; - Gmisc = derive2 { name="Gmisc"; version="1.6.2"; sha256="15ax691xk14y7qxnr1d0qbzb7y3ikv0x4qgsn4ss9z6b0hqclc84"; depends=[abind checkmate forestplot Hmisc htmlTable knitr lattice magrittr Rcpp rmarkdown XML]; }; + Gmisc = derive2 { name="Gmisc"; version="1.6.4"; sha256="1hqpxrff0nhbgin8x69ip3lnsj13g3alm4y8l2hv0rnxibxd4x4z"; depends=[abind checkmate forestplot Hmisc htmlTable knitr lattice magrittr Rcpp rmarkdown XML]; }; GoFKernel = derive2 { name="GoFKernel"; version="2.1-1"; sha256="0xygsdmggl35fafyp431mkwalwixw2r3f32qll1pf72dfwd8y8d3"; depends=[KernSmooth]; }; GofKmt = derive2 { name="GofKmt"; version="2.0"; sha256="0018ljzlj7nkf12g0sqa8iyq3j2bnj9la3fwblx9lbdn8nxgllhn"; depends=[Rsolnp]; }; GoodmanKruskal = derive2 { name="GoodmanKruskal"; version="0.0.2"; sha256="1qwarachkhc2yvjyxfcfbgjc1x9ni5xb7f93zviv8mz3c35bhs3b"; depends=[classInt corrplot]; }; @@ -1454,11 +1513,14 @@ in with self; { GrapheR = derive2 { name="GrapheR"; version="1.9-86"; sha256="1iizknyrpgiz1fh1fjls58n5v5fpki25j7kfbwfkp5ijf1q54ml6"; depends=[]; }; GrassmannOptim = derive2 { name="GrassmannOptim"; version="2.0"; sha256="05r5zg4kf3xd6pp56bl8ldchdxvspxkdfd33b623hndjhn4lj2lq"; depends=[Matrix]; }; GreedyEPL = derive2 { name="GreedyEPL"; version="1.0"; sha256="19b8fwxsjd6shwjxhpawa8pmlj6yn0j4577g6b93xbcs76wgrvd1"; depends=[Rcpp RcppArmadillo]; }; + GreedyExperimentalDesign = derive2 { name="GreedyExperimentalDesign"; version="1.2"; sha256="1x3hnyqq75krlygg82qm0ldd8nsv071nzgr63zkjmifc7hgi0nvb"; depends=[GreedyExperimentalDesignJARs rJava]; }; + GreedyExperimentalDesignJARs = derive2 { name="GreedyExperimentalDesignJARs"; version="1.0"; sha256="14i6m5qlh1fca9xmzid01hicd3bkf6rzl139ss78gvw544zrapw7"; depends=[rJava]; }; GreedySBTM = derive2 { name="GreedySBTM"; version="1.0"; sha256="1r29cd8nxpyc82rz2xb9mk9wc17gcdlcl9lw1j3y4npr2z0qhf13"; depends=[Rcpp RcppArmadillo]; }; Greg = derive2 { name="Greg"; version="1.2.2"; sha256="0drp9qf7yid88vcd2q2qdw23l1jynircffqnylznz8xzyh4qv7ik"; depends=[Epi forestplot Gmisc Hmisc htmlTable knitr magrittr nlme rms sandwich stringr]; }; Grid2Polygons = derive2 { name="Grid2Polygons"; version="0.2.1"; sha256="0db5kv0rbsg077h2badw28x9363ymqkr52sw5wlg9x1bk9cczhi7"; depends=[inlmisc raster rgeos sp]; }; GriegSmith = derive2 { name="GriegSmith"; version="1.0"; sha256="1a7gnaig1wvxpph7d8c37kx51dznzk0457fzf7alw95iwpyb4z7j"; depends=[spatstat]; }; GrimR = derive2 { name="GrimR"; version="0.5"; sha256="005ywc31yn1cs54kjlkrryw0s7zm8dqqfjkdlkm4s1sbc9r3mssz"; depends=[car]; }; + GroupComparisons = derive2 { name="GroupComparisons"; version="0.1.0"; sha256="0fxgh1mksrfmd4yjrpxg3nfby5wyx75lj0shb5xrdzl7pxzh56ai"; depends=[car]; }; GroupSeq = derive2 { name="GroupSeq"; version="1.3.5"; sha256="0c74nlsqa5ly0kf6p4n7gfvd0ygkq78bx851ryniwpnnalvsq8l7"; depends=[]; }; GroupTest = derive2 { name="GroupTest"; version="1.0.1"; sha256="1v2230mw0irsr5y8n45g8sd362jp7f6dy2r532mhflfdqy6i2khs"; depends=[]; }; GrpString = derive2 { name="GrpString"; version="0.3.2"; sha256="14ss6assqk6s9kv4bvzlydm8qrbnslm4vj876q5dn2dw4k50dai1"; depends=[cluster plyr Rcpp]; }; @@ -1469,10 +1531,13 @@ in with self; { HAC = derive2 { name="HAC"; version="1.0-5"; sha256="0dc79qjhyydq0k4d8wvg970hs56i9yhxjrh5ky9a178ya61vw208"; depends=[copula numDeriv]; }; HAP_ROR = derive2 { name="HAP.ROR"; version="1.0"; sha256="1id9amz1cc2l2vnpp0ikbhf8ghbgzqd1b9dfivnyglg7996c3gbg"; depends=[ape hash]; }; HAPim = derive2 { name="HAPim"; version="1.3"; sha256="03qy0pxazv3gdq3fck7171ixilb9zi1dwnvc4v7d726g0lvn80pg"; depends=[]; }; + HARModel = derive2 { name="HARModel"; version="0.1"; sha256="182ibz3xhq7wz444rsf1q8rsz1fm8ma8n3wvvb76n12ydc6hx7cr"; depends=[Rcpp RcppArmadillo sandwich xts zoo]; }; HARtools = derive2 { name="HARtools"; version="0.0.5"; sha256="10a92jsk1ccgxi5g6byrs4fbj5l2kih7vhib0jg6spdqi6rhqla1"; depends=[assertthat htmltools htmlwidgets jsonlite magrittr]; }; HBP = derive2 { name="HBP"; version="0.1.2"; sha256="0khw15xj3k40bsdbbs1m5ad1ykji3fx0549697c1svhkm7zrrny4"; depends=[BiocInstaller coin flexclust ggplot2 gplots HiTC igraph lattice multcomp OmicCircos pgirmess reshape2 rtracklayer]; }; HBSTM = derive2 { name="HBSTM"; version="1.0.1"; sha256="0bx7dxcfj46k4kqpqb39w4qkm4hvr1ka8d8rws445vkyl31kr0q6"; depends=[fBasics maps MASS]; }; HBglm = derive2 { name="HBglm"; version="0.1"; sha256="1sral7lh5qw5mn31n8459pk52frgw1bjq0z5ckpsnbc4qf3xxcjn"; depends=[bayesm Formula MfUSampler sns]; }; + HCR = derive2 { name="HCR"; version="0.1.1"; sha256="14s46dyw3ifp3pwwlcwbbl47i6hy2whjj1n65i28am5a33nycgha"; depends=[data_table]; }; + HCT = derive2 { name="HCT"; version="0.1.0"; sha256="0p1bj0spqff8m27lvxdfhk8z1r1z04v1dsv7mqbjyzl07w005hk3"; depends=[rstan]; }; HCmodelSets = derive2 { name="HCmodelSets"; version="0.1.1"; sha256="0xyaap718x01g2w5gk6yz3s87zvxfymhfn5klazn16jh8v446m4f"; depends=[ggplot2 mvtnorm survival]; }; HDCI = derive2 { name="HDCI"; version="1.0-2"; sha256="0wxbv54kbygymhh4r7052vnbj603c1kya01ykvmqzzkjyyfzidkz"; depends=[doParallel foreach glmnet iterators lattice Matrix mvtnorm slam]; }; HDDesign = derive2 { name="HDDesign"; version="1.1"; sha256="1jim4h9bwn8r637va7m81kwwsfwyzs9pzn5a9i7c8xz8b1x191bj"; depends=[]; }; @@ -1481,11 +1546,14 @@ in with self; { HDMD = derive2 { name="HDMD"; version="1.2"; sha256="0na0z08fdf47ghfl2r3fp9qg5pi99kvp7liymwxym2wglkwl4chq"; depends=[MASS psych]; }; HDPenReg = derive2 { name="HDPenReg"; version="0.93.2"; sha256="0blmp7cwsklp8aqdcyyjmv419cgc7iz0pb4629y8slqw0zq2n6gm"; depends=[Matrix Rcpp rtkore]; }; HDclassif = derive2 { name="HDclassif"; version="2.1.0"; sha256="1d79wki03yyr3hqz44xlx07msmxb59sm2mrq2za34fdbvvrmw58v"; depends=[MASS rARPACK]; }; + HDclust = derive2 { name="HDclust"; version="1.0"; sha256="1wdnigpsvwi7kpmnmv1zzkdjlb2iff76x83g06y9fbrdywhjcbgh"; depends=[Rcpp RcppProgress]; }; + HDcpDetect = derive2 { name="HDcpDetect"; version="0.1.0"; sha256="0ai35d9df5pmva52sb1rr20f11h0mbal6d179g865b7w6n90kfr1"; depends=[]; }; HDoutliers = derive2 { name="HDoutliers"; version="1.0"; sha256="0pby640bad0jcf1lkwg2g6flassb1pimnjm411c6x8rgvmiphc23"; depends=[FactoMineR FNN mclust]; }; - HDtest = derive2 { name="HDtest"; version="0.1"; sha256="0vlwpx9l6r0izfcf9fgna72w39w64b95s3q527mapjb6a3676avg"; depends=[checkmate doParallel expm foreach MASS mvtnorm]; }; + HDtest = derive2 { name="HDtest"; version="2.1"; sha256="1c9x4s59762sp7drbm5h1xv22kpifq7p0x3dkrfcd0ficbbma5v8"; depends=[checkmate clime doParallel expm fastclime foreach MASS mvtnorm]; }; HDtweedie = derive2 { name="HDtweedie"; version="1.1"; sha256="14awd7sws0464f68f5xwnv1xvr0xflvx2z2zzcfj1csvk3af0zzj"; depends=[]; }; - HEMDAG = derive2 { name="HEMDAG"; version="2.1.3"; sha256="110c37y08ivqvh5qcn6plsxf7ariqwdx6my7xv83kj2v570a4qiw"; depends=[graph PerfMeas precrec preprocessCore RBGL]; }; - HGNChelper = derive2 { name="HGNChelper"; version="0.3.6"; sha256="1bm6zxwafbp65p6w4rk2y1bw7ig60br2mk75c4frdzqw3yw0zwxd"; depends=[]; }; + HEMDAG = derive2 { name="HEMDAG"; version="2.2.5"; sha256="0j4zq8lhpscay8gvlvgzpxiwaka2hgx15lx3v16k17iwafm6b3fw"; depends=[doParallel foreach graph iterators plyr precrec preprocessCore RBGL]; }; + HGNChelper = derive2 { name="HGNChelper"; version="0.5.2"; sha256="02hqd1jajbmilwyzgpy74xy8n1406zpkha9hpzzar5pmjda41nn9"; depends=[]; }; + HGSL = derive2 { name="HGSL"; version="1.0.0"; sha256="1p453xr3d1bmqc6mrmzb0hz9p0gp25m6v6qr0l3bapcf71vzbvq1"; depends=[]; }; HH = derive2 { name="HH"; version="3.1-35"; sha256="0sykmmipbph9x7k371liiyj2vmqv0as2hr9x6yrn38ls6bscjlj4"; depends=[abind colorspace gridExtra Hmisc lattice latticeExtra leaps multcomp RColorBrewer reshape2 Rmpfr shiny vcd]; }; HHG = derive2 { name="HHG"; version="2.2"; sha256="114nfpdjdisryil9l8cws885qdskgrjm2cclx543hh4cdhpnkxnp"; depends=[Rcpp]; }; HI = derive2 { name="HI"; version="0.4"; sha256="0i7y4zcdr6wcjy43lz9h8glzpdv0pz7livr95xb1j4p8zafykday"; depends=[]; }; @@ -1497,22 +1565,25 @@ in with self; { HKprocess = derive2 { name="HKprocess"; version="0.0-2"; sha256="1j2yhb7k8zf4nlzdf0p6x9ca7ak4lwwak8mcc60kpilw2fws27k5"; depends=[gtools MCMCpack]; }; HLMdiag = derive2 { name="HLMdiag"; version="0.3.1"; sha256="02pgvfyj3xpy7laxryqivsws8jl3m79fwfzpqj8ad794a06gh87g"; depends=[ggplot2 MASS Matrix mgcv plyr Rcpp RcppArmadillo reshape2 RLRsim]; }; HLSM = derive2 { name="HLSM"; version="0.8"; sha256="1503n1qb91ca2m37g4lfzgzh1kh5l74g7z1r9s5grsj2s9by0ayh"; depends=[coda igraph MASS]; }; - HMDHFDplus = derive2 { name="HMDHFDplus"; version="1.1.8"; sha256="15z0war5isw9xnln7py3di8f45pwvdw6x6wljl18fcxpmanmlfcf"; depends=[RCurl XML]; }; + HMDHFDplus = derive2 { name="HMDHFDplus"; version="1.9.1"; sha256="0gqaagzzspw3a40dqsqhxhjb8kii6xsc62p9b464rkhrwrm5i4z8"; depends=[httr RCurl XML]; }; HMM = derive2 { name="HMM"; version="1.0"; sha256="0z0hcqfixx1l2a6d3lpy5hmh0n4gjgs0jnck441akpp3vh37glzw"; depends=[]; }; HMMCont = derive2 { name="HMMCont"; version="1.0"; sha256="1drni4f72x83sprn65wnhw0pv1q8lfkgmxdr9h4rwv1accril85x"; depends=[]; }; - HMMEsolver = derive2 { name="HMMEsolver"; version="0.1.0"; sha256="19iwy0nj0vw3cslrfdai1l1yg84c5diyxpy65jd2f419ag3rmki3"; depends=[Rcpp RcppArmadillo Rdpack]; }; + HMMEsolver = derive2 { name="HMMEsolver"; version="0.1.1"; sha256="16wiy9dlfbhn20mqq3qa5hbhaxkaqxw5wbdwcj4is5pd6zl0501p"; depends=[Rcpp RcppArmadillo Rdpack]; }; + HMMcopula = derive2 { name="HMMcopula"; version="1.0.1"; sha256="1dylgfbsij9xjkslh42vp37fbgvpafpyvjbyb234pgrynjgi1kr2"; depends=[copula doParallel foreach matrixcalc mvtnorm]; }; + HMMextra0s = derive2 { name="HMMextra0s"; version="1.0.0"; sha256="15y5q92x69sn80pc2x7xwbnsfrqpf7cjdja4hkq861jshkksbmg1"; depends=[ellipse mvtnorm]; }; HMMoce = derive2 { name="HMMoce"; version="1.0.0"; sha256="0w2hrqjz75j9l6wimz9rsr8bwa5rvag0pavmyqkcb8jgqdgka8hx"; depends=[curl doParallel dplyr fields foreach imager locfit lubridate maptools raster RColorBrewer rgeos RNetCDF sp]; }; HMP = derive2 { name="HMP"; version="1.5.1"; sha256="0v32pkgr9rhpz77y18z356lc68hcncbszawwqsldwhwc8dvb3rwn"; depends=[dirmult doParallel foreach ggplot2 gplots lattice MASS rpart rpart_plot vegan]; }; HMPTrees = derive2 { name="HMPTrees"; version="1.4"; sha256="1jha64iyb0816rdg2i3z7i31z02r72k6acmvw0ibw3sli8zcvphb"; depends=[ape dirmult doParallel foreach HMP]; }; HMR = derive2 { name="HMR"; version="0.4.2"; sha256="0rbpghih99avaq803f6hb66pfbqgzh1i2yaqs0mhbj61yyjzyb7b"; depends=[]; }; HMVD = derive2 { name="HMVD"; version="1.0"; sha256="0agzvsl2n3zg3i519b93jqpiq9zix0bbrjdzk3ymsbb42dzkmj0d"; depends=[MASS]; }; HPbayes = derive2 { name="HPbayes"; version="0.1"; sha256="1kpqnv7ymf95sgb0ik7npc4qfkzc1zb483vwnjpba4f42jhf508y"; depends=[boot corpcor MASS mvtnorm numDeriv]; }; - HRM = derive2 { name="HRM"; version="0.9.1"; sha256="0pv3lly5rm620868mkka3m0hp5k2yrpymwdjdh19s4vdj4xjnb15"; depends=[data_table ggplot2 MASS matrixcalc plyr pracma reshape2 xtable]; }; + HRM = derive2 { name="HRM"; version="1.0.2"; sha256="0krd27raa2ys2gsgqpbxpfnmigj8s6mk3al7fh3czx5l0d73iqy1"; depends=[data_table doBy ggplot2 MASS matrixcalc mvtnorm plyr pseudorank Rcpp reshape2 xtable]; }; HRQoL = derive2 { name="HRQoL"; version="1.0"; sha256="1gr9rhr8gdnh7bw2v3r0xc3yhmzrx2gzgsd8wd5mmsp81ph0h5lz"; depends=[car fmsb Matrix matrixcalc numDeriv RColorBrewer rootSolve]; }; HSAR = derive2 { name="HSAR"; version="0.4.2"; sha256="0rxb2klmyynr8rzq6ka8p40lw81wjd0jkw2wg3vg90zny0zps98j"; depends=[Rcpp RcppArmadillo spdep]; }; HSAUR = derive2 { name="HSAUR"; version="1.3-9"; sha256="0b2hyn59lr2pma87fcj7mli3qmrbnfhgd8fv02fa317rj52399qz"; depends=[]; }; HSAUR2 = derive2 { name="HSAUR2"; version="1.1-17"; sha256="0jc554lz5lj7180vd4rbrjkywar4bh38c7i9kyxhd5clg4afxpw8"; depends=[]; }; HSAUR3 = derive2 { name="HSAUR3"; version="1.0-9"; sha256="1rpvblak0xvkavbvbd35zq1lcsl5z1zp30vn70wqbkdj7szhj9b4"; depends=[]; }; + HSDiC = derive2 { name="HSDiC"; version="0.1"; sha256="0wiixb1ylx0l8qfgh5ark6alkdq87xaak1jlxizw1m589vghvqfp"; depends=[glmnet Matrix ncvreg quadprog]; }; HSSVD = derive2 { name="HSSVD"; version="1.2"; sha256="1k7ga397grl0r4p0ipjgw5xlafb2528rpww67bw7mmy01w87a1cc"; depends=[bcv]; }; HTMLUtils = derive2 { name="HTMLUtils"; version="0.1.7"; sha256="05y505jazzahnd6jsp3plqz8hd75991hhhcpcdn8093rinb1f8l1"; depends=[R2HTML]; }; HTSCluster = derive2 { name="HTSCluster"; version="2.0.8"; sha256="0wnbfh6hdx8692jilgmv8sys1zm6fqc6mim7vvjhyqlmpm8gm0kg"; depends=[capushe edgeR plotrix]; }; @@ -1528,13 +1599,15 @@ in with self; { HandTill2001 = derive2 { name="HandTill2001"; version="0.2-12"; sha256="1rijjv27zwdznznvwlb5hahixmfxayr6vs11p1mzwqma8qhsn5ak"; depends=[]; }; Hankel = derive2 { name="Hankel"; version="0.0-1"; sha256="0g3b0ji8hw29k0wxxvlnbcm0z91p4vbajbrhm6cqbccjq85lg4si"; depends=[]; }; HapEstXXR = derive2 { name="HapEstXXR"; version="0.1-8"; sha256="00p8pziy8q6vki7brpd57c7ckc9zw41c90h47yp9vb3ndanfqavp"; depends=[survival]; }; + Hapi = derive2 { name="Hapi"; version="0.0.3"; sha256="0jqjhfq38k161kqff5cx0vxpsmjm2y5ca7049mvqiwqwvi4fp08m"; depends=[ggplot2 HMM]; }; Haplin = derive2 { name="Haplin"; version="7.0.0"; sha256="1hdclx33ndjgz4xvg8myngzslcrmvc994nlgf3hp3km3591j62rj"; depends=[ff ffbase MASS mgcv snow SuppDists]; }; HaploSim = derive2 { name="HaploSim"; version="1.8.4"; sha256="0794f76hc9qvjmay7c61cmzycqafljs0g0hliq9xfrw4f23gq3sa"; depends=[]; }; HardyWeinberg = derive2 { name="HardyWeinberg"; version="1.6.1"; sha256="16n8qanxx0p5ny5zqxafn8hwb1xv94y1wig1iql8as5a5qh8lwcz"; depends=[mice Rcpp Rsolnp]; }; HarmonicRegression = derive2 { name="HarmonicRegression"; version="1.0"; sha256="0inz3l610wl0ibqjyrhfbmwmcfzcmcfhixai4lpkbfsyx93z2i4d"; depends=[]; }; Harvest_Tree = derive2 { name="Harvest.Tree"; version="1.1"; sha256="021zmppy7p2iakaxirfjdb5jzakg1ijma9d25ly2ni0nx0p1mh6z"; depends=[rpart]; }; - HelpersMG = derive2 { name="HelpersMG"; version="3.0.0"; sha256="1y5q4z9yxap16bkcjsybm2754wm0x31hfqdnp2bb4gbvhz1jhas6"; depends=[coda]; }; + HelpersMG = derive2 { name="HelpersMG"; version="3.3"; sha256="10czlshajg20k0ipq1nqawm4wad5a3pvyf4ibg47jwhlqzfxmd7f"; depends=[coda]; }; HeritSeq = derive2 { name="HeritSeq"; version="1.0.0"; sha256="0ibb2nkjk1d59gc1ljihihsjai3jp4jsbbariv05h1z26pgpc9p3"; depends=[cplm DESeq2 lme4 MASS pbapply SummarizedExperiment tweedie]; }; + HextractoR = derive2 { name="HextractoR"; version="1.3"; sha256="09x1zjpkm091yr7by83ksddka8ldczb0dg09yr1gb6j68rhlbigp"; depends=[doParallel foreach seqinr]; }; HiCblock = derive2 { name="HiCblock"; version="1.4"; sha256="07f94j9y5g6f09yi7iwag020ddfhpvrj5idfxwbr900hj3vgm1gm"; depends=[GenomeInfoDb GenomicRanges glmnet HiTC IRanges MASS Matrix rtracklayer S4Vectors]; }; HiCfeat = derive2 { name="HiCfeat"; version="1.3"; sha256="1hf24g4cph13s0cbicll3dxvxycdzwbsy6cv297vlkw4sc574ixw"; depends=[GenomeInfoDb GenomicRanges glmnet IRanges Matrix rtracklayer]; }; HiCglmi = derive2 { name="HiCglmi"; version="1.3"; sha256="17vwdhnf36cg56vidq7d85s4vgk2pnn5py1y2wsl2dm41vdl0847"; depends=[GenomeInfoDb GenomicRanges glmnet HiTC IRanges MASS Matrix rtracklayer S4Vectors]; }; @@ -1542,8 +1615,9 @@ in with self; { HiCseg = derive2 { name="HiCseg"; version="1.1"; sha256="19581k3g71wrznyqrp4hmspqyzcbcfbc48xgjlq13zmqii45hcn6"; depends=[]; }; HiDimDA = derive2 { name="HiDimDA"; version="0.2-4"; sha256="0gxkxzys9mcy33xvsim8klaqmb2xwvy5bvgkn9r400j4qfjd3cgg"; depends=[]; }; HiLMM = derive2 { name="HiLMM"; version="1.1"; sha256="09135cwi6kqrvzdlivm86q1dqn6cbbi6nspdm0c2s700jl49pl5z"; depends=[]; }; - HiResTEC = derive2 { name="HiResTEC"; version="0.52"; sha256="1kci3kxrf96ba9vawh2ln1rhpzyfkj259v8iyhrdrnhq58xrvkf5"; depends=[beeswarm Biobase InterpretMSSpectrum openxlsx plyr Rdisop xcms]; }; + HiResTEC = derive2 { name="HiResTEC"; version="0.54"; sha256="1qzdhwyrxiiwkz0j9c3pd0vdccgvhrh66sd0rc9qnh34cmqxjd6b"; depends=[beeswarm Biobase InterpretMSSpectrum openxlsx plyr Rdisop xcms]; }; HiddenMarkov = derive2 { name="HiddenMarkov"; version="1.8-11"; sha256="1yh85pdb9r90qxcl5gxslyplxzrx8knrrsl2q65l57zfkqj185ja"; depends=[]; }; + HierDpart = derive2 { name="HierDpart"; version="0.1.2"; sha256="115irjz5pfx3yd8saap57zsy0ssjhadkqmv7wadsnzwlpsv2wb1z"; depends=[adegenet diveRsity dplyr entropart GGally ggplot2 hierfstat reshape2 tibble]; }; HierO = derive2 { name="HierO"; version="0.2"; sha256="1lqj5grjly4kzxl7wb192aagz2kdvpnjdan2kcg5yxwvg1xcvwv1"; depends=[bitops RCurl rneos tcltk2 XML]; }; HighDimOut = derive2 { name="HighDimOut"; version="1.0.0"; sha256="0r7mazwq4fsz547d3nyavmqya7144lg3fkl5f7amrp48l9h85vx2"; depends=[DMwR FNN foreach ggplot2 plyr proxy]; }; HistDAWass = derive2 { name="HistDAWass"; version="1.0.1"; sha256="1lc9pz3f6akzyisgwzfl4m5z400bailv1bmsb3snha8nhpqdk3nk"; depends=[class FactoMineR ggplot2 ggridges histogram Rcpp RcppArmadillo]; }; @@ -1556,11 +1630,11 @@ in with self; { Homeric = derive2 { name="Homeric"; version="0.1-3"; sha256="1vcs8fj39zpz45p7gph0mnx65hgr35na0b79i8llyw7i1h7zqzxr"; depends=[]; }; HomoPolymer = derive2 { name="HomoPolymer"; version="1.0"; sha256="1bxc33dx9y9rr9aii4vn9d1j9v5pd4c0xayfdldz8d9m2010xr4a"; depends=[deSolve MenuCollection RGtk2]; }; HotDeckImputation = derive2 { name="HotDeckImputation"; version="1.1.0"; sha256="1mqfn6yw5846ynrcgzka0m6ikfppa5civjkhj42rhp2v2xk25li7"; depends=[Rglpk]; }; - Hotelling = derive2 { name="Hotelling"; version="1.0-4"; sha256="1ncq74ifdn1ha6wbkvygbwi2n0nwaj1lifyqp36sy0hql3ahrac9"; depends=[corpcor]; }; + Hotelling = derive2 { name="Hotelling"; version="1.0-5"; sha256="1ism2lzi2kmi62gp319qsi64pj2kj5sfh50f1qnv8vgdkb76bdx5"; depends=[corpcor]; }; HyPhy = derive2 { name="HyPhy"; version="1.0"; sha256="0994ymv7sswbp8qw3pay34s926cflw2hq2gnchw7rknybvlsrinq"; depends=[ape R_utils]; }; HybridFS = derive2 { name="HybridFS"; version="0.1.2"; sha256="05skml3v2zm5hmd6slpmx3lfwi6x5wfgbx7cnhc6l077b11jpdd9"; depends=[caTools FSelector InformationValue ROCR woeBinning]; }; HybridMC = derive2 { name="HybridMC"; version="0.2"; sha256="1wgzfyk0scwq9s2sdmc91fj7r4d7zlgwgnj6mdiia8w88ja8kzqy"; depends=[coda]; }; - HydeNet = derive2 { name="HydeNet"; version="0.10.7"; sha256="001ifh5ddg7q4rckhi662zd9a8milfi3v2gmgy76x0wq2xph7yrj"; depends=[checkmate DiagrammeR dplyr graph gRbase magrittr nnet pixiedust plyr rjags stringr]; }; + HydeNet = derive2 { name="HydeNet"; version="0.10.8"; sha256="0rb456rfx3jgvjkbn50v38aq7chi6482wxk4mm26l9n537rhdpjz"; depends=[checkmate DiagrammeR dplyr magrittr nnet pixiedust plyr rjags stringr]; }; HydroMe = derive2 { name="HydroMe"; version="2.0"; sha256="1a1d3lay94mzwk8n22l650h3p133npdf4aj63zgrdw4760p54rqf"; depends=[minpack_lm nlme]; }; HyperbolicDist = derive2 { name="HyperbolicDist"; version="0.6-2"; sha256="1wgqbx9ascyk6gw1dmvfz6hljvbh49gb9shr9qgf22qbq83waiva"; depends=[]; }; IAPWS95 = derive2 { name="IAPWS95"; version="1.1.0"; sha256="03kggkcyvbgh7l9haa1ljg0sv6f2rs06r6j0w2x7cpm31qmc3yzl"; depends=[ggplot2 pander Rcpp]; }; @@ -1570,14 +1644,14 @@ in with self; { IATanalytics = derive2 { name="IATanalytics"; version="0.1.1"; sha256="10g9iscfjmlxrkzls9320h9azpc5fnhh6276p7zn8sxqgp1nvnz9"; depends=[]; }; IATscores = derive2 { name="IATscores"; version="0.2.1"; sha256="1nm07wlrnjx36wr3jbv2faayh1vrlfid124b27w9v0x0dk145i82"; depends=[dplyr qgraph reshape2 stringr]; }; IAbin = derive2 { name="IAbin"; version="1.0"; sha256="1cpj2mx72n4v0yd8jbbnhj2w5d0sc8pw7rc8ahnn1hfa38pwwsyx"; depends=[]; }; - IBCF_MTME = derive2 { name="IBCF.MTME"; version="1.3-2"; sha256="16ynw5p26cyji6g5k7nhq56p5h86rrkrh9xr85kajb1f3dr6rmyw"; depends=[lsa tidyr]; }; + IBCF_MTME = derive2 { name="IBCF.MTME"; version="1.4-2"; sha256="07qs8jwyxl03mslgdpnxscg67js6a6lp9sdn2gp3ahyckbb0ni74"; depends=[dplyr lsa tidyr]; }; IBDLabels = derive2 { name="IBDLabels"; version="1.1"; sha256="1m9fd058yjxva6hin7i72i2nl285wfm0jkdn5xcng27yqlijyrm9"; depends=[]; }; IBDhaploRtools = derive2 { name="IBDhaploRtools"; version="1.8"; sha256="1754239pdil6b383mpzyi8zb9l9hzg15dwgn5246v97g1y3mlp5r"; depends=[]; }; IBDsim = derive2 { name="IBDsim"; version="0.9-7"; sha256="1wq0w9d4kwvq1hc5l0m8wrqfhnncapmnrh29x9vvafv50ym7yb3l"; depends=[paramlink]; }; IBrokers = derive2 { name="IBrokers"; version="0.9-12"; sha256="0mhh4kgwrncrcysvnvah6xc7fhx5ywjzn258cs9xj9kzns0jblk6"; depends=[xts zoo]; }; IC2 = derive2 { name="IC2"; version="1.0-1"; sha256="03jjb62msxjxdg9l3zd1ns0d2w37hkxy5pnjgaywxw3vfk4zwfj9"; depends=[]; }; ICAFF = derive2 { name="ICAFF"; version="1.0.1"; sha256="0zazx4nv81s75appg10aayks04mx6m5n9yf5hqrbxh3yj68vzxfy"; depends=[]; }; - ICAOD = derive2 { name="ICAOD"; version="0.9.6"; sha256="1c9zlskhsz5w1a5lkfcxclnsgxbvkgcgnbzvc3xk1mpa2zb2pvap"; depends=[cubature mnormt nloptr Rcpp RcppEigen sn]; }; + ICAOD = derive2 { name="ICAOD"; version="0.9.7"; sha256="1x1x5z5kn55vbgx6hx44f99sp666v3wlzc26q1ap1rb8j48vz2wr"; depends=[cubature mnormt nloptr Rcpp RcppEigen sn]; }; ICBayes = derive2 { name="ICBayes"; version="1.1"; sha256="1bmxba3bv9szzxvjf1blwxwdhw87h7s04cfn63c1gqpnpwsmr03y"; depends=[coda HI survival]; }; ICC = derive2 { name="ICC"; version="2.3.0"; sha256="0y8zh9715cp9bglxpygqwgigrarq37sj845lk1xl0ydwinl0a6kk"; depends=[]; }; ICC_Sample_Size = derive2 { name="ICC.Sample.Size"; version="1.0"; sha256="1w6v1jp8bfvf6c49ikswkc5527gdx5cyqnw95x00pgmm6riwlsp9"; depends=[]; }; @@ -1593,19 +1667,18 @@ in with self; { ICSOutlier = derive2 { name="ICSOutlier"; version="0.3-0"; sha256="1vj1y4zw8pkghkg4qnmx0yk1yw4zzl9075n5czrna9ckk2p29fmh"; depends=[ICS moments mvtnorm]; }; ICSShiny = derive2 { name="ICSShiny"; version="0.5"; sha256="0a13vps0mkv5qs6qnl7ar0mdbkbd7i1c6kgwahmkb3id3n9bw0cl"; depends=[DT ICS ICSNP ICSOutlier rrcov shiny simsalapar]; }; ICV = derive2 { name="ICV"; version="1.0"; sha256="1na87i39jy5d8ibldqcqz3a072ihkgcl0k629sxch9hk6v6j5lly"; depends=[]; }; - ICcalib = derive2 { name="ICcalib"; version="1.0.7"; sha256="1p224srs1jakl7iyybcn9f6r9kcwxyrikdrfa9wjgkhz60pv88fs"; depends=[fitdistrplus icenReg ICsurv MASS msm numDeriv Rcpp RcppArmadillo survival]; }; + ICcalib = derive2 { name="ICcalib"; version="1.0.8"; sha256="1y2w12ka0qxh9dg6dlcrnndz1xrv8gkppan64qkyk5vjrh18ajz4"; depends=[fitdistrplus icenReg ICsurv MASS msm numDeriv Rcpp RcppArmadillo survival]; }; ICsurv = derive2 { name="ICsurv"; version="1.0"; sha256="1mbndpy3x5731c9y955wscy76jrxlgv33bf6ldqp65cwyvdgxl86"; depends=[MASS matrixcalc]; }; ICtest = derive2 { name="ICtest"; version="0.3-1"; sha256="10wxx2b8m5h0k8f6lgf0z1xhvhr14dyrda2pf46w03fa23f5mb7l"; depends=[GGally ggplot2 ICS ICSNP JADE png Rcpp RcppArmadillo survey]; }; IDCard = derive2 { name="IDCard"; version="0.3.0"; sha256="06b5zqmgh4clni3mv6ab2a52r4z34isbz0hd1i61793gps9fkc0y"; depends=[stringr]; }; - IDE = derive2 { name="IDE"; version="0.1.0"; sha256="0z8nc2h3ivy7prxh9ndg8q3inh6rmjg7x969gj7z6qbml3122zq8"; depends=[DEoptim dplyr FRK ggplot2 Matrix sp spacetime sparseinv tidyr]; }; + IDE = derive2 { name="IDE"; version="0.2.0"; sha256="13n6zsqb78mz9gpa0vvxc73fyhf7n79bcs0j0asg3fs4iy43q6qp"; depends=[DEoptim dplyr FRK ggplot2 Matrix sp spacetime sparseinv tidyr]; }; IDF = derive2 { name="IDF"; version="1.1"; sha256="19fx04gvzwzkxbd453l3wx46s22dbnh0nxdrmsr4f7l67kihbwdr"; depends=[evd ismev]; }; IDPSurvival = derive2 { name="IDPSurvival"; version="1.2"; sha256="0hifs8vw3rxlb5vlxs1433pcv2dh7p0mxpgb2n03d98f20vkdwfw"; depends=[gtools Rsolnp survival]; }; - IDPmisc = derive2 { name="IDPmisc"; version="1.1.17"; sha256="0nbwdyg9javjjfvljwbp2jl0c6414c11zb2pirmm5pmimaq9vv0q"; depends=[lattice]; }; + IDPmisc = derive2 { name="IDPmisc"; version="1.1.18"; sha256="02f5zy69y76sn9zm8i8fhcfbppnh767csza3m4j9mzpnac4n9393"; depends=[lattice]; }; IDSpatialStats = derive2 { name="IDSpatialStats"; version="0.3.5"; sha256="05wxymvv1p7dik5y227qnp4w1lpdmqfp17zrk6iah8gyv9yjsvbh"; depends=[doParallel foreach igraph spatstat]; }; IDetect = derive2 { name="IDetect"; version="0.1.0"; sha256="1q1jwgildhx6sp883ni7vcsa3gj997855v5ky41dyf34kv7hvdl1"; depends=[]; }; - IDmining = derive2 { name="IDmining"; version="1.0.4"; sha256="1jjxw9pdhd3wx5qnjnssf0j3bg91li1ar5ps02dhv0c49hslg0x0"; depends=[data_table doParallel foreach]; }; + IDmining = derive2 { name="IDmining"; version="1.0.5"; sha256="1i6wclsp97sdbj4jp6wmpf0bkj21r8y08rvmgxcsw36rmr8kd1pa"; depends=[data_table doParallel foreach]; }; IFP = derive2 { name="IFP"; version="0.2.1"; sha256="06zyadcr8p6q0c5h9n29yl02ixysdj6lfbn9hfir0bk9hyv9yfyr"; depends=[coda haplo_stats]; }; - IFSPlot = derive2 { name="IFSPlot"; version="1.0"; sha256="0sydm9g54v5xy6m5rikx7q020aqvsilzcbg6c4vl79g9d2r8q07s"; depends=[gplots jsonlite Rcpp RcppArmadillo reshape2 rgl]; }; IGG = derive2 { name="IGG"; version="1.0"; sha256="1cibb9z18xc1zx1813lk14n6p5am84hm7w0hkrsif4j3p89lrwif"; depends=[GIGrvg glmnet MASS Matrix pscl]; }; IGP = derive2 { name="IGP"; version="0.1.0"; sha256="0xv89gmyfgnq5kzcmjbp5nx9zbr3gbdzkvffp99bxbkvf759m255"; depends=[PythonInR R6]; }; IHSEP = derive2 { name="IHSEP"; version="0.1"; sha256="1djc5509b5iyi6y0i36h77l6sq1h0w721v2isxqldcqk3gb0bx11"; depends=[lpint Rcpp]; }; @@ -1618,25 +1691,28 @@ in with self; { IMP = derive2 { name="IMP"; version="1.1"; sha256="0ilvgz2bngffyx6ifqqx1snsn6mmq7rx3wg44093yrviaw39qdfv"; depends=[dplyr ggplot2 shiny tidyr]; }; IMPACT = derive2 { name="IMPACT"; version="0.1.1"; sha256="0ai22gvmfj9j00cw742szfqqay63b5lmnszkwwdfdvidls43v0bm"; depends=[]; }; IMTest = derive2 { name="IMTest"; version="1.0.0"; sha256="0n0swbi051cr7mrjmszqg79hxa38ccyq69ws8c37ixwb0lpxmx48"; depends=[lme4 ltm MASS reshape2]; }; - IMak = derive2 { name="IMak"; version="1.2.0"; sha256="0h9hs9zpi7glf1i4gjl8xvz5hq23ask81mxpmfjpyxv03j1bwdih"; depends=[]; }; + IMak = derive2 { name="IMak"; version="1.2.1"; sha256="0yvmwqxp4y1bsbv37sdw3aa5w1j1hyqs5fs7nf2kkr6wj6ixq7ny"; depends=[]; }; + IMmailgun = derive2 { name="IMmailgun"; version="0.1.2"; sha256="09acmi6xj186fb8nhj8q0nxmkp2p32a1l95glzvz84gax4xakhz8"; depends=[httr]; }; INCATome = derive2 { name="INCATome"; version="1.0"; sha256="1gbmcirs49ydmk5rg2vl5gdy39dfx9psw5mijibzjszcfjar3kqs"; depends=[genefilter limma multtest RankProd siggenes]; }; INDperform = derive2 { name="INDperform"; version="0.1.1"; sha256="08wp7zn0s61nl2r99r3712cxkhqp9xy2vghpjjcvr5y48dkw7kzf"; depends=[cowplot dplyr ggplot2 htmlwidgets jsonlite lazyeval magrittr mgcv nlme purrr RColorBrewer rhandsontable shiny stringr tibble tidyr vegan]; }; - INLABMA = derive2 { name="INLABMA"; version="0.1-8"; sha256="13r89r14xpihfqddwzkhxg4jgxyl59826x2insrall3mj2yffj90"; depends=[Matrix sp spdep]; }; + INLABMA = derive2 { name="INLABMA"; version="0.1-11"; sha256="0wzyb3c7zpksqz198kigi4rpblvk0rjamngmyabw5xdpizxdg6zi"; depends=[Matrix sp spdep]; }; INSPIRE = derive2 { name="INSPIRE"; version="1.5"; sha256="0938l50yxnb5q628mp874ayx9ybvcjddis20y1hzm5cmlsg0hqhg"; depends=[missMDA]; }; IPCAPS = derive2 { name="IPCAPS"; version="1.1.5"; sha256="0d1nws86k1yph2f4drwrh4jvmmc9nnqmmswpwirmgsp3ma58kc42"; depends=[apcluster expm fpc KRIS LPCM MASS Matrix Rmixmod]; }; - IPEC = derive2 { name="IPEC"; version="0.1.0"; sha256="1dcmjvqsz3hlfymnlsld9psalfvq7z51yx39dkd11d25cj1mf8na"; depends=[MASS numDeriv]; }; + IPEC = derive2 { name="IPEC"; version="0.1.2"; sha256="1fglr5hs61n13251145wqzvxy362fx32yzral96xd8li76ljxiic"; depends=[MASS numDeriv]; }; IPMRF = derive2 { name="IPMRF"; version="1.2"; sha256="1zvwwhiy0p134zvm5ldc92pdd1ap72bhbrlf02rz9m2hlsxmwy67"; depends=[gbm party randomForest]; }; IPMpack = derive2 { name="IPMpack"; version="2.1"; sha256="08b79g5a9maxnxladvc2x2dgcmm427i8p6hhgda3mw2h5qmch2q3"; depends=[MASS Matrix nlme]; }; + IPSUR = derive2 { name="IPSUR"; version="3.0"; sha256="0nlxlmp2vjj17pxvx9nly85wnwgv19qs1a3fsw7p1c5jrk6daqqi"; depends=[actuar aplpack binom boot coin distrEx e1071 HH Hmisc lmtest mvtnorm prob qcc RcmdrPlugin_IPSUR reshape scatterplot3d TeachingDemos vcd]; }; IPWsurvival = derive2 { name="IPWsurvival"; version="0.5"; sha256="0lmw0ifj8cds8lzyjkkv0i0zim23p0a3pawlhmhdm3nfvwawb853"; depends=[survival]; }; IPtoCountry = derive2 { name="IPtoCountry"; version="0.0.1"; sha256="1b10z93mc31cr1c5wxp9xz9cr3jm4n4g5kav09dyallpgw60rskp"; depends=[data_table devtools dtables ggplot2 install_load maps scales]; }; IQCC = derive2 { name="IQCC"; version="0.7"; sha256="1zalpmyywkrnci0jd8irakjhiqmr52zhj1sbxf9pz5c7wks2rdbc"; depends=[MASS miscTools qcc]; }; IRATER = derive2 { name="IRATER"; version="0.0.1"; sha256="0jxdvjmnmangbqy3ibb5qrj9jz3wrzs0wa1r2gjk4v8vsbk0ipcf"; depends=[coda lattice plyr R2admb]; }; - IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="2.1.0"; sha256="033j0dba1bzbbjn7q827h4d1rw91z8gbr2bb119lds4v8zkkfpxx"; depends=[dplyr IRISSeismic RCurl seismicRoll signal stringr XML]; }; - IRISSeismic = derive2 { name="IRISSeismic"; version="1.4.8"; sha256="0j419gn9jv9zpd2rzgsc6flz6k22gr11kany1av02cvs5dymwb4p"; depends=[pracma RCurl seismicRoll signal stringr XML]; }; + IRISMustangMetrics = derive2 { name="IRISMustangMetrics"; version="2.1.2"; sha256="02ikg1ahz0yanq92mby00s9s1njph410mqalpzfv2pbppipw26dh"; depends=[dplyr IRISSeismic RCurl seismicRoll signal stringr XML]; }; + IRISSeismic = derive2 { name="IRISSeismic"; version="1.4.9"; sha256="1732056jcq06wb65648vx4h80dfk0brd8igm6ssk5hgfjxzy221n"; depends=[pracma RCurl seismicRoll signal stringr XML]; }; IROmiss = derive2 { name="IROmiss"; version="1.0.1"; sha256="01l08s1g7h8cki372daa61pw3wac3pbv5d4yqnphg5p8ihsmrc5d"; depends=[equSA huge mvtnorm ncvreg]; }; IRTShiny = derive2 { name="IRTShiny"; version="1.2"; sha256="094ax94y6k5z4vlxfla2w19f57q0z32nwwd5npjbgmnkhvfhhl9v"; depends=[beeswarm CTT ltm psych shiny shinyAce]; }; IRTpp = derive2 { name="IRTpp"; version="0.2.6.1"; sha256="10shzyiawk65pikawvhg58kx6fpvs1dazqmfjf3rfvly1lc0px1q"; depends=[FactoMineR MASS mvtnorm numDeriv Rcpp]; }; - IRdisplay = derive2 { name="IRdisplay"; version="0.5.0"; sha256="1jwhcp9dp1kdqcx8zq6lzbczsm9rg5qlb8sd9aznpvn9a2745d9x"; depends=[repr]; }; + IRdisplay = derive2 { name="IRdisplay"; version="0.6"; sha256="1w49gbdf9gj66r9kx1s0gckl9lymmz864f8x9f96mrcwxkkchdc7"; depends=[repr]; }; + ISAT = derive2 { name="ISAT"; version="1.0.5"; sha256="0xlq568spfz527jxbqamrn1j87hnasg0kp2bcyjycaghmhsc6zmg"; depends=[gtools stringr]; }; ISBF = derive2 { name="ISBF"; version="0.2.1"; sha256="12mk4d0m5rk4m5bskkkng5j6a9dzh8l1d74wh8lnamq7kf9ai9if"; depends=[]; }; ISDA_R = derive2 { name="ISDA.R"; version="1.0"; sha256="0w6p2iy6s7fy8pw2cf4b5zhqcgjjwd5bkax1aqflaaj4ppmfx64v"; depends=[scatterplot3d]; }; ISLR = derive2 { name="ISLR"; version="1.2"; sha256="1bfay6cs40crhh34v2ksn4zdxivimfyjvk19wqbnjr7vs837l3xh"; depends=[]; }; @@ -1646,9 +1722,8 @@ in with self; { ISOweek = derive2 { name="ISOweek"; version="0.6-2"; sha256="1f1h8pgjaa14cvaj8ldl87b4vslxwvyfj46m0hkylwp73sv3g2mm"; depends=[stringr]; }; ISR3 = derive2 { name="ISR3"; version="0.98"; sha256="0mmpdl9ndlj9i0k3zl7ja0g7y9pm67igw925ld5qnz7a36plygxs"; depends=[]; }; ISwR = derive2 { name="ISwR"; version="2.0-7"; sha256="1rd1wrvl8wlc8ya5lndk74gnfvj9wp29z8617v3kbf32gqhby7ng"; depends=[]; }; - ITGM = derive2 { name="ITGM"; version="0.6"; sha256="0acrm15vb1r0nnp0bp5zf8g27i3sy3d7bpd50lj0w1rl6dgwfznh"; depends=[data_table Fgmutils ggplot2 gsubfn plyr randomcoloR rbokeh sqldf]; }; - ITNr = derive2 { name="ITNr"; version="0.2.0"; sha256="1bpnijwlrjg2l2qi9m5dlywq8xpb019kiqw288fzv6njm1yvwy56"; depends=[animation blockmodeling circlize comtradr cowplot dplyr fastmatch GGally ggplot2 GoodmanKruskal igraph intergraph maps Matrix ndtv network networkDynamic plyr RColorBrewer reshape2 sna statnet tnet WDI xergm xergm_common]; }; - ITRSelect = derive2 { name="ITRSelect"; version="1.0"; sha256="0zwgvcbjjd9wg19d36ygzsdkm04ndv91wg20wc3d78dbvyzy2kmh"; depends=[Formula Matrix ncvreg Rglpk svMisc]; }; + ITNr = derive2 { name="ITNr"; version="0.3.0"; sha256="1aiqkpxnam13r4q8q03yzd6a1wvl2gf40kqncbrpfvcaiv5zsq68"; depends=[blockmodeling circlize comtradr cowplot dplyr fastmatch GGally ggplot2 GoodmanKruskal igraph intergraph maps network networkDynamic plyr RColorBrewer reshape2 sna tnet WDI xergm_common]; }; + ITRSelect = derive2 { name="ITRSelect"; version="1.0-1"; sha256="0llr4hrlbnb728j5rw7vd3r9qlqf571hrldnm72kicis5di2v5di"; depends=[Formula Matrix ncvreg Rglpk svMisc]; }; IUPS = derive2 { name="IUPS"; version="1.0"; sha256="01pv03ink668fi2vxqybli0kgva13gxhqfdxkwz6qk5rnpzwvf5w"; depends=[boot Matching R2jags]; }; IalsaSynthesis = derive2 { name="IalsaSynthesis"; version="0.1.6"; sha256="15iwywvzhgiyigl8f488b7ra89rz0a7ymfsdgdlqfls3fmld7b4a"; depends=[testit]; }; Iboot = derive2 { name="Iboot"; version="0.1-1"; sha256="1fahh86kgv2axj2qg14n87v888sc0kb567s6zr3fh5zv361phwkq"; depends=[]; }; @@ -1656,15 +1731,16 @@ in with self; { IgorR = derive2 { name="IgorR"; version="0.8.1"; sha256="1lkiz3gxj8i1xbr5jp69z21rpk7kz3a68h29inp1qa7zi7gikmgx"; depends=[bitops]; }; ImaginR = derive2 { name="ImaginR"; version="0.1.7"; sha256="12ypfrqw6xym84i1axd3h0qd2md96rc0glas3rgzpdhdyw4lbfmn"; depends=[imager jpeg]; }; Imap = derive2 { name="Imap"; version="1.32"; sha256="0b4w0mw9ljw6zxwvi0qzb08yq9n169lzgkdcwizrd07x9k9xjxs7"; depends=[]; }; + Immigrate = derive2 { name="Immigrate"; version="0.0.1"; sha256="087hzamxb61dfsi73iv3i5i95i63ichl360h3sk18s8j217h0y3g"; depends=[pROC Rcpp]; }; ImpactIV = derive2 { name="ImpactIV"; version="1.0"; sha256="1bb6gw1h15hscr71hy779k2x5ywzx63ylim3hby02d7fnnj46p58"; depends=[nnet]; }; ImportExport = derive2 { name="ImportExport"; version="1.1"; sha256="12i9mwspk59zicn1mn21xrs90c8dqxm1q7alqbzscgkpf3xbjrnn"; depends=[chron gdata haven Hmisc RODBC xlsx]; }; ImputeRobust = derive2 { name="ImputeRobust"; version="1.3"; sha256="1mpccld9dw2v5rifla5g4qydcqkfagspnnq7r8if5lfm8mji33k3"; depends=[extremevalues gamlss gamlss_dist lattice mice purrr]; }; InPosition = derive2 { name="InPosition"; version="0.12.7"; sha256="1f7xb2kxikmja4cq7s1aiwhdq27zc6hghjbliqqpm8ci8860lb8p"; depends=[ExPosition prettyGraphs]; }; - InSilicoVA = derive2 { name="InSilicoVA"; version="1.2.0"; sha256="12fqnim6n8ha1bm8vs6ni21s5h0jb9sny88hn0xy6nsgzzzwpw5i"; depends=[coda ggplot2 InterVA5 rJava]; }; - IncDTW = derive2 { name="IncDTW"; version="1.0.3"; sha256="19ppjpczbjv1bpzyyyasr5szblrsjimpc04hazhdgqzhil0v5sj2"; depends=[ggplot2 Rcpp scales]; }; + InSilicoVA = derive2 { name="InSilicoVA"; version="1.2.4"; sha256="0118xmywm0dxia8pn807njb67fcag54ysz0679kwvjyfwkb47sra"; depends=[coda ggplot2 InterVA5 rJava]; }; + IncDTW = derive2 { name="IncDTW"; version="1.0.4"; sha256="14l13kzmf3cbhh115afxcx6diwbdfx45bvfqdv68rlzhx3dbdiwm"; depends=[data_table ggplot2 Rcpp RcppArmadillo RcppParallel scales]; }; IncucyteDRC = derive2 { name="IncucyteDRC"; version="0.5.4"; sha256="1k7jqcyx5n4my5rbyfa693ganbk91xganyagq8x8szli9h1491ii"; depends=[cowplot dplyr drc DT ggplot2 magrittr shiny tidyr XML]; }; IndTestPP = derive2 { name="IndTestPP"; version="1.0"; sha256="1ywl35k2syv46pz6ap5sjkynapqj04aq197czspqky0pvrq7ldr1"; depends=[]; }; - IndepTest = derive2 { name="IndepTest"; version="0.1.1"; sha256="1fiyafi22zs8cd42pnkf1psv4nxnrj7nk088pvk99hgasb7wjhpq"; depends=[FNN mvtnorm Rdpack]; }; + IndepTest = derive2 { name="IndepTest"; version="0.2.0"; sha256="017jasqsxm5m13rhfy9gxvd8nfib5k5y5c8520p3hcffqrxr683p"; depends=[FNN mvtnorm Rdpack]; }; IndependenceTests = derive2 { name="IndependenceTests"; version="0.2"; sha256="04qfh2mg9xkfnvp6k7w1ip4rb663p3pzww9lyprcjvr3hcac7gqa"; depends=[xtable]; }; IndexNumR = derive2 { name="IndexNumR"; version="0.1.0"; sha256="1385j7a1hz8i5g00x1p1rd32gq243w2zrzvk781zjqdq7az33fsw"; depends=[]; }; IndianTaxCalc = derive2 { name="IndianTaxCalc"; version="1.0.2"; sha256="1fxw884wj9n8drk2xz3rgr4f7b4fckh5firrf5gdz6d1nk9hdvc1"; depends=[]; }; @@ -1676,16 +1752,18 @@ in with self; { Information = derive2 { name="Information"; version="0.0.9"; sha256="0pszwzj3r7vdvdsy9w1qz95zxp7y2bsyg36b58mm4qcvcvymd4kn"; depends=[data_table doParallel foreach ggplot2 iterators plyr]; }; InformationValue = derive2 { name="InformationValue"; version="1.2.3"; sha256="1b5g2wyp7x5cdhmf4325n3q7afa6i352lh80j28c8s4356pr3w9j"; depends=[data_table ggplot2]; }; InformativeCensoring = derive2 { name="InformativeCensoring"; version="0.3.4"; sha256="145k4hggymra2jnxkcck795xk280yyldfzh9ls2irnsxmxfszr52"; depends=[boot dplyr survival]; }; - Infusion = derive2 { name="Infusion"; version="1.2.0"; sha256="00l12balvdypcypqj8b61lfbksh6jnayai4bxchnxv99h3jq4l24"; depends=[blackbox mvtnorm numDeriv pbapply proxy spaMM viridis]; }; + Infusion = derive2 { name="Infusion"; version="1.3.0"; sha256="0z6yils8ckfk0wdi45iav2yijz2cxn1zfkg3q9l6149czlnhvws1"; depends=[blackbox foreach mvtnorm numDeriv pbapply proxy spaMM viridis]; }; InjurySeverityScore = derive2 { name="InjurySeverityScore"; version="0.0.0.1"; sha256="13h2a95bzibszpbr6sjhm3hj03b4znrrczm8pvni70ln2lcskri0"; depends=[dplyr rlang tidyr]; }; InspectChangepoint = derive2 { name="InspectChangepoint"; version="1.0.1"; sha256="1wirdbz4v7hk7znpjhw9j3l596lmfcrlr4wxayw7klbbdhcwq5qs"; depends=[MASS]; }; - IntClust = derive2 { name="IntClust"; version="0.0.2"; sha256="1n0ywickky1w5m8swfidiprdnkrv0mrh9z5294bimxj5ppi1yl8v"; depends=[a4Core ade4 analogue Biobase cluster e1071 FactoMineR ggplot2 gplots gridExtra gtools limma lsa plotrix pls plyr prodlim SNFtool]; }; + IntClust = derive2 { name="IntClust"; version="0.1.0"; sha256="0whmc084gq5zip82vnwailnwvw9jawk9rx4wqiz1lr693w9xbq66"; depends=[a4Core ade4 analogue Biobase circlize cluster data_table e1071 FactoMineR ggplot2 gplots gridExtra gtools igraph limma lsa plotrix pls plyr Rdpack SNFtool]; }; IntLik = derive2 { name="IntLik"; version="1.0"; sha256="13ww5bsbf1vnpaip0w53rw99a8hxzziibj7j66cm31jmi8l6fznf"; depends=[maxLik]; }; + IntNMF = derive2 { name="IntNMF"; version="1.2.0"; sha256="09qzyvv7d4wr68qrlhcd4ivr65is3mypv1vaxpswwcjmcmyr4gzp"; depends=[cluster InterSIM MASS mclust NMF]; }; IntegrateBs = derive2 { name="IntegrateBs"; version="0.1.0"; sha256="1pkx4wpahd1sabzx55law3710x3vbh9yi6kii8gs2xfq3cb1llmq"; depends=[]; }; IntegratedJM = derive2 { name="IntegratedJM"; version="1.6"; sha256="0fv24z7vidhn09ljk09pjzkrlg2rlwxcrhfjc53ybjjgsgay99z6"; depends=[Biobase ggplot2 nlme]; }; IntegratedMRF = derive2 { name="IntegratedMRF"; version="1.1.9"; sha256="0kklgc48cib4bjfs9qbw13nkp8xyjdazrg6z15x69jylnxyakic7"; depends=[bootstrap ggplot2 limSolve MultivariateRandomForest Rcpp]; }; + InterSIM = derive2 { name="InterSIM"; version="2.2.0"; sha256="14yccan88szf26w1hg1lkvmssids961gng7il3bjr2f1l0k8vd3b"; depends=[MASS NMF]; }; InterVA4 = derive2 { name="InterVA4"; version="1.7.5"; sha256="0la99ylx8fnn4kpqa364nhs12y2hzp3sm0awsx5sfdv6n7m9js33"; depends=[]; }; - InterVA5 = derive2 { name="InterVA5"; version="1.0.1"; sha256="1wsaf48ajqnb9cb7h13jrinmszk6ayqim15fkgxbirmp88hcy9k1"; depends=[]; }; + InterVA5 = derive2 { name="InterVA5"; version="1.0.2"; sha256="0mjfvkpnl46kzas6ch8x3liffqixifdrdjc7vxfyc1a4az7kn8vq"; depends=[]; }; Interact = derive2 { name="Interact"; version="1.1"; sha256="1g9zhafdpr7j410bi8p03d8x9f8m3n329x8v01yk15f65fp7pl1d"; depends=[]; }; InteractiveIGraph = derive2 { name="InteractiveIGraph"; version="1.0.6.1"; sha256="0srxlp77xqq0vw2phfv7zcnqswi2i5nzkpqbpa5limqx00jd12zy"; depends=[igraph]; }; Interatrix = derive2 { name="Interatrix"; version="1.1.1"; sha256="1ljxgiia0y8wv1rlm5brd0yvs1r7r5wyrs6nykmwrwwya4k34mpz"; depends=[MASS tkrplot]; }; @@ -1694,7 +1772,8 @@ in with self; { Interpol_T = derive2 { name="Interpol.T"; version="2.1.1"; sha256="1fbsl1ypkc65y6c0p32gpi2a2aal8jg02mclz7ri57hf4c1k09gz"; depends=[chron date]; }; InterpretMSSpectrum = derive2 { name="InterpretMSSpectrum"; version="1.2"; sha256="1iaw4i14l2vp1f163g2q4pwv9cnqrx14ik4s8zw0iha4zwcrc3ja"; depends=[DBI doParallel enviPat foreach plyr Rdisop RSQLite]; }; IntervalSurgeon = derive2 { name="IntervalSurgeon"; version="1.0"; sha256="0dpgfgnnx6r29y8y3pac1rgi503wvlwggx5dh6fhqnxw5yfink61"; depends=[Rcpp]; }; - InvariantCausalPrediction = derive2 { name="InvariantCausalPrediction"; version="0.7-1"; sha256="1pz06l50fm8327n1v8wnvh8q51g97crb4c07si3hywd5y1hkiwkp"; depends=[glmnet linprog mboost RColorBrewer]; }; + IntrinioStockAPI = derive2 { name="IntrinioStockAPI"; version="0.0.1"; sha256="0gvkynyi2iag2kwwb51b8125md8kw65b48zk9qdf8pppg9s1r46a"; depends=[gtools httr jsonlite stringr]; }; + InvariantCausalPrediction = derive2 { name="InvariantCausalPrediction"; version="0.7-2"; sha256="08s1jhyyb60cjk314q9n24niq55n21h83ml3q9a2xhr956kch8ms"; depends=[glmnet mboost]; }; InvasionCorrection = derive2 { name="InvasionCorrection"; version="0.1"; sha256="1wwx2kssjysl1lraac36pvxq34vg8qm0vwi861rs1iipfc35i84j"; depends=[lattice]; }; Inventorymodel = derive2 { name="Inventorymodel"; version="1.1.0"; sha256="1l87xghdksgmb2k3a8j382p7ffi2pma38a6pn31sfjsa6bgmrdnk"; depends=[e1071 GameTheoryAllocation]; }; IrishDirectorates = derive2 { name="IrishDirectorates"; version="0.2.0"; sha256="1m3c3dj4729chk1n3k7awvi1jdfnds2w36vm268azg53j6c7l4b6"; depends=[]; }; @@ -1704,8 +1783,8 @@ in with self; { IsoCI = derive2 { name="IsoCI"; version="1.1"; sha256="0r7ksfic6p2v95c953s4gbzzclk4ldxysm8szb8xba1w0nx2izil"; depends=[KernSmooth]; }; IsoGene = derive2 { name="IsoGene"; version="1.0-24"; sha256="0flm0mszankvl3aizwsazyhvz2xkr4gfqiqywpc0r1swqj19610r"; depends=[affy Biobase ff Iso xtable]; }; IsoSpecR = derive2 { name="IsoSpecR"; version="1.0.3"; sha256="1cnkzc29k0inz6kdn77l0ymzjgf1hid8jza7nla4ym2s0gidgdyf"; depends=[Rcpp]; }; - IsoplotR = derive2 { name="IsoplotR"; version="1.3"; sha256="1c7m48vj4884xzxilgv8ykginaayy8mp35xf6xaw7v0f4x2w3bk9"; depends=[MASS]; }; - IsoriX = derive2 { name="IsoriX"; version="0.7.1"; sha256="1x2vdgvnfkrgcrm7pdrdvr7m72y0274dab5cyhz31j8l2gqxw9la"; depends=[latticeExtra numDeriv raster rasterVis sp spaMM viridisLite]; }; + IsoplotR = derive2 { name="IsoplotR"; version="2.1"; sha256="03fwa4agyrk5l5n42i083j36k22752vb4r87qpcw7l68h87jnbv7"; depends=[MASS]; }; + IsoriX = derive2 { name="IsoriX"; version="0.8.1"; sha256="0rr9frj0mhismls60vgax357jgfyq2wci7rvhvp70fh5k998mzid"; depends=[lattice latticeExtra numDeriv raster rasterVis sp spaMM viridisLite]; }; IsotopeR = derive2 { name="IsotopeR"; version="0.5.4"; sha256="0xgha5alh5y5qfz00rl73q4xlamnmrwij7kckljmy6zgrlrdnl6x"; depends=[colorspace ellipse fgui plotrix runjags]; }; JADE = derive2 { name="JADE"; version="2.0-1"; sha256="0s7cdvhjcdxdqv4mgjd07xi3s0ngjvpxsmy0ary735rs5y6198mm"; depends=[clue]; }; JAGUAR = derive2 { name="JAGUAR"; version="3.0.1"; sha256="0lyc8biwj9yir1i06klp2jkb31mnzwp226aw7pwabkprfhqgfmqd"; depends=[lme4 plyr Rcpp RcppArmadillo RcppProgress reshape2]; }; @@ -1714,8 +1793,9 @@ in with self; { JFE = derive2 { name="JFE"; version="1.2"; sha256="1jfdphn9435f9nmwnb4x2wj8fv7c2i432n9wyvrlqcm424ql0cml"; depends=[BurStFin fAssets fBasics fPortfolio iClick MASS PerformanceAnalytics quantmod rugarch tcltk2 timeDate timeSeries xts zoo]; }; JGEE = derive2 { name="JGEE"; version="1.1"; sha256="078348n623hlyc3n9yh67vv5acsnxapmbwybvrb1i7kawmqw5msi"; depends=[gee MASS]; }; JGL = derive2 { name="JGL"; version="2.3"; sha256="1351iq547ln06nklrgx192dqlfnn03hkwj3hrliqzfbmsls098qc"; depends=[igraph]; }; - JGR = derive2 { name="JGR"; version="1.8-4"; sha256="0zfjfqlfrsz4wjdq78zasvgd3ldgcx20h16bbar1l7wv843j71ym"; depends=[JavaGD rJava]; }; + JGR = derive2 { name="JGR"; version="1.8-6"; sha256="0n3z4dm4q93did5b7hw802akhr6gyidshvlj2db4sghmf07czk2c"; depends=[JavaGD rJava]; }; JM = derive2 { name="JM"; version="1.4-8"; sha256="1nq07hw30fqnag1h08b7crl2yfs85gyrn70aaw11bdbjv06r2x55"; depends=[MASS nlme survival]; }; + JMI = derive2 { name="JMI"; version="0.1.0"; sha256="05phkwfb9v4g9jixlvbj6br7sbi64zvrgjwfr0v87ijddkxc9si9"; depends=[Rcpp RcppArmadillo]; }; JMbayes = derive2 { name="JMbayes"; version="0.8-71"; sha256="0vbw3z1njl3jm4qixzh5fs3gmiqz7n3kz3a4a9sdxj498z063svj"; depends=[doParallel foreach Hmisc jagsUI MASS nlme Rcpp RcppArmadillo rstan shiny survival xtable]; }; JMcmprsk = derive2 { name="JMcmprsk"; version="0.9.3"; sha256="0bjaiygn2sq40f2cwa1c6j73748j2cx5q69pd4jgfgbpm9r25r4f"; depends=[MASS Rcpp]; }; JMdesign = derive2 { name="JMdesign"; version="1.1"; sha256="0w5nzhp82g0k7j5704fif16sf95rpckd76jjz9fbd71pp2d80vlh"; depends=[]; }; @@ -1724,28 +1804,28 @@ in with self; { JPEN = derive2 { name="JPEN"; version="1.0"; sha256="12rvp5bmlkwyr1gg336k655hp09gym0d2wwry70c1rz30x1sf2zs"; depends=[mvtnorm]; }; JRF = derive2 { name="JRF"; version="0.1-4"; sha256="1xpvscn9iawwa0vfh3kfwzdni436bf42nvm18b8abh033ljvqpij"; depends=[]; }; JSM = derive2 { name="JSM"; version="0.1.3"; sha256="1p5vlk2fcrb42pi7srkymjacfg05vlaspvhaw94lq1rhvxdw87yl"; depends=[nlme Rcpp RcppEigen statmod survival]; }; - JWileymisc = derive2 { name="JWileymisc"; version="0.2.1"; sha256="0cli204f1b5hj3qz62fycww12a6dv7xxxszkxgrxirw6mpdf858c"; depends=[cowplot data_table devtools foreach ggplot2 Hmisc lavaan MASS mgcv mice multcompView plyr]; }; + JWileymisc = derive2 { name="JWileymisc"; version="0.3.1"; sha256="1683sq0fb8ms0kzfc46azkjfsk2khhq43y265k1g920s5pc7bn8q"; depends=[cowplot data_table devtools emmeans foreach ggplot2 ggthemes lavaan lme4 lmerTest MASS Matrix mgcv mice multcompView nlme psych quantreg rms robustbase VGAM zoo]; }; JavaGD = derive2 { name="JavaGD"; version="0.6-1"; sha256="13n6xzbbjgd0bpwv2xgm3dlscg87wh32q6fcq50kk6byp6yv05sc"; depends=[]; }; Jdmbs = derive2 { name="Jdmbs"; version="1.3"; sha256="0jjnn1lrrakai34srp9ks8a563amd1rp9vd4ydnpmgfma5qlify0"; depends=[igraph png]; }; Jmisc = derive2 { name="Jmisc"; version="0.3.1"; sha256="1szn29dng54l2xmrm6pg3d5rmwdc1ks23vsnsmplnr5rx7yj002s"; depends=[]; }; JoSAE = derive2 { name="JoSAE"; version="0.3.0"; sha256="1vjxzbfs8a7kpmn2lb9dca67d4njmzjr3pl16s0r9ihmmxxwwili"; depends=[nlme]; }; Johnson = derive2 { name="Johnson"; version="1.4"; sha256="12ajcfz5mwxvimv8nq683a2x3590gz0gnyviviyzf5x066a4q0lj"; depends=[]; }; - JointAI = derive2 { name="JointAI"; version="0.2.0"; sha256="1y3mvj1m2mi6ss3svfrlk5lbyh3zp1mkyjgl7fv317n3xjg006s2"; depends=[coda MASS mcmcse rjags]; }; + JointAI = derive2 { name="JointAI"; version="0.3.0"; sha256="1xav3ngg4jfxbji1wqqwazywx9fhxm8snkssv8rbqvnmyc0nj49x"; depends=[coda MASS mcmcse rjags]; }; JointModel = derive2 { name="JointModel"; version="1.0"; sha256="1zgs5c7saqyqxvxmhw5sxy5w67abq344aid6igw1da05bfy2az6h"; depends=[lme4 statmod survival]; }; Julia = derive2 { name="Julia"; version="1.1"; sha256="0i1n150d89pkds7qyr0xycz6h07zikb2y07d5fcpaqs4446a8prg"; depends=[]; }; - JuliaCall = derive2 { name="JuliaCall"; version="0.14.0"; sha256="1zrj1jn55qxxg95h1rfbfgzd7dn3hxm7gkwbin6zkcxi8qdc3690"; depends=[R6 Rcpp]; }; + JuliaCall = derive2 { name="JuliaCall"; version="0.16.1"; sha256="11ganlkc65i4vljdjzhr419p1rw3dr4pw2jk6gvb8jk8pasfs36h"; depends=[Rcpp]; }; JumpTest = derive2 { name="JumpTest"; version="0.0.1"; sha256="1d5zmjwmajzdg5d1ws40zchx9wiaav01fby1v3irym2mx30jgbqn"; depends=[MASS Rcpp RcppEigen]; }; - JuniperKernel = derive2 { name="JuniperKernel"; version="1.4.0.0"; sha256="0yjfdpilz08cbnn35bxiqbn0d312mfxzdkb643db0zl34x5akxpa"; depends=[data_table gdtools jsonlite pbdZMQ Rcpp repr]; }; + JuniperKernel = derive2 { name="JuniperKernel"; version="1.4.1.0"; sha256="1zghlfwh4wsjjp7ldp5y86ffyzc27ccl5j9lcwlp1di9slaqjign"; depends=[data_table gdtools jsonlite pbdZMQ Rcpp repr]; }; KANT = derive2 { name="KANT"; version="2.0"; sha256="169j72pmdkcj6hv8qgmc02aps0ppvvl1vnr1hzrb1gsf7zj7bs3y"; depends=[affy Biobase]; }; KENDL = derive2 { name="KENDL"; version="1.1"; sha256="05vsh3x0li964a485q3n19c7fahcprvg1bnrvffagkxf8w1iz153"; depends=[]; }; KERE = derive2 { name="KERE"; version="1.0.0"; sha256="1b16cb3ihcsp9jffmd45sd7ia4pibikmj62ad344wmq22q4fpliy"; depends=[]; }; - KFAS = derive2 { name="KFAS"; version="1.3.2"; sha256="11ikpac63as1c4mz6kdrynjyy4wrfr4qrk1m2g4gbcrg10dnc06q"; depends=[]; }; + KFAS = derive2 { name="KFAS"; version="1.3.3"; sha256="026nrlwsmal9n76za4sjlfb5ybw88ricnazg018nc195c345ql04"; depends=[]; }; KFKSDS = derive2 { name="KFKSDS"; version="1.6"; sha256="1g11f936p554bfxlm4slxhfxki5vqkks1mrbqw4w83v2rcb50f8d"; depends=[]; }; KGode = derive2 { name="KGode"; version="1.0.1"; sha256="05g8zr3jm13cl6wk9m693gxa3fn5cjppm56j7ih4zzswzk9b67h9"; depends=[mvtnorm pracma pspline R6]; }; KMDA = derive2 { name="KMDA"; version="1.0"; sha256="0x4kjjdd59wvgg699vrj99wqg3s1qbkbskis1c34xv9b8bzcv94j"; depends=[]; }; KMgene = derive2 { name="KMgene"; version="1.2"; sha256="1yj9l1mqhvyhicyycnkd639q3zkrx15ba11z9911l4c0gql8syf1"; depends=[CompQuadForm coxme kinship2 MASS Matrix mgcv nlme survival]; }; KMsurv = derive2 { name="KMsurv"; version="0.1-5"; sha256="0hi5vvk584rl70gbrr75w9hc775xmbxnaig0dd6hlpi4071pnqjm"; depends=[]; }; - KODAMA = derive2 { name="KODAMA"; version="1.4"; sha256="0qzpgj6ljzd8n8vgmf53pmblsmypl86j7njd3pz0d370bxfchsqj"; depends=[Rcpp RcppArmadillo]; }; + KODAMA = derive2 { name="KODAMA"; version="1.5"; sha256="1pb7qba7dp25x4znhvihc21z5jk6bgk6sg0v24gbvqhv5irm7kwf"; depends=[Rcpp RcppArmadillo]; }; KOGMWU = derive2 { name="KOGMWU"; version="1.1"; sha256="0n07wrpmmvxflxpmhkp3gm40xz2w4j0l8dsljhmfiyxcf5y7kq2g"; depends=[pheatmap]; }; KRIG = derive2 { name="KRIG"; version="0.1.0"; sha256="1hpmjzzrh5b042xh14dgxvn5x5ini63vq5jz1i6rjgvsdf734f98"; depends=[Rcpp RcppArmadillo Rdpack]; }; KRIS = derive2 { name="KRIS"; version="1.1.1"; sha256="0v2xgdwd8lp399il6grjkysq2gj38fmjlxlvg5ciq3g3cp7cdy3m"; depends=[rARPACK]; }; @@ -1753,7 +1833,7 @@ in with self; { KRMM = derive2 { name="KRMM"; version="1.0"; sha256="0wxzhrrc4lx20nxjny7rcfw3bya7drn88zbrlzx9f531298xwbrk"; depends=[cvTools kernlab MASS robustbase]; }; KSD = derive2 { name="KSD"; version="1.0.0"; sha256="0wqmbr51yv7f87pnhph2nrj9y2d5jql2agizcaq6lax23lj6xfb7"; depends=[pryr]; }; KSEAapp = derive2 { name="KSEAapp"; version="0.99.0"; sha256="1gfgpa2d32y6bzvf4ww70sm7niq34sqmyrhi0phlqxshqq9xviqc"; depends=[gplots]; }; - KScorrect = derive2 { name="KScorrect"; version="1.2.3"; sha256="1i69glkyi3ydzfgd8d6zrbgjq7gy9laq00jdppbqnl13i1n14sp7"; depends=[MASS mclust]; }; + KScorrect = derive2 { name="KScorrect"; version="1.2.4"; sha256="16qdmvgx3y170i495vmph2bhnc3j1z5232jibr3yzxl9i887kk0f"; depends=[MASS mclust]; }; KSgeneral = derive2 { name="KSgeneral"; version="0.1.1"; sha256="1ldk3fvwbr6hw7x3ydgzixgc41a0fbbic699zjlnpj5x4mjg1qby"; depends=[dgof MASS Rcpp]; }; KTensorGraphs = derive2 { name="KTensorGraphs"; version="0.1"; sha256="1hsndxslqgca0ay4q277zjwnwz8bzwfkzz915dgqvjd2v4afrvzx"; depends=[]; }; KappaGUI = derive2 { name="KappaGUI"; version="2.0.2"; sha256="0vklny804xpd9r60j4a01j2gak8jizwjw0abf7yvbcalv3zbpb3k"; depends=[irr shiny]; }; @@ -1764,7 +1844,7 @@ in with self; { KernSmooth = derive2 { name="KernSmooth"; version="2.23-15"; sha256="1xhha8kw10jv8pv8b61hb5in9qiw3r2a9kdji3qlm991s4zd4wlb"; depends=[]; }; KernSmoothIRT = derive2 { name="KernSmoothIRT"; version="6.1"; sha256="1hq4sykddh9sg24qrnccii89nqxmq7hnldhn8wl6y62aj0h1nrqm"; depends=[plotrix Rcpp rgl]; }; KernelKnn = derive2 { name="KernelKnn"; version="1.0.8"; sha256="1xiz90n9wggn5fv42h8c6gd3j6vmkwyq1433wwnmzrz5kw7f6vgb"; depends=[Rcpp RcppArmadillo]; }; - Kernelheaping = derive2 { name="Kernelheaping"; version="2.1.8"; sha256="03m5dwgm98x6ncifyyp2yxln4bm87rkrx84bdihywjd0x73pbklv"; depends=[fastmatch ks magrittr MASS mvtnorm plyr sp sparr]; }; + Kernelheaping = derive2 { name="Kernelheaping"; version="2.2.0"; sha256="06vb8zpdf5brjsfiyd1s3gmhlfprpkw7fmjr594p4lw354lvhb4m"; depends=[fastmatch ks magrittr MASS mvtnorm plyr sp sparr]; }; KnapsackSampling = derive2 { name="KnapsackSampling"; version="0.1.0"; sha256="17yzmd11k1n5iy54vbcvpzvkm8ypbl6n1kfi931wwrrcq9y7hg22"; depends=[lpSolve]; }; Knoema = derive2 { name="Knoema"; version="0.1.16"; sha256="0v6w8rrw8nd4l1by5w9xd4hbxp55cma89kljha47ykvmnflsrjsc"; depends=[base64enc digest httr jsonlite lubridate xts zoo]; }; KnowBR = derive2 { name="KnowBR"; version="1.8"; sha256="1krkaxwx8qqlnlwc9fc663qx5y9c9lcws69fnqjdcfgim54pl3xz"; depends=[fossil mgcv plotrix sp vegan]; }; @@ -1772,8 +1852,8 @@ in with self; { KoulMde = derive2 { name="KoulMde"; version="3.1.0"; sha256="158lg1jr3lgn85wgdxww6nldy9blxnnjry6hwkp6kcjpg9jljjl8"; depends=[expm Rcpp RcppArmadillo]; }; Kpart = derive2 { name="Kpart"; version="1.2.2"; sha256="02df0pr8a0gm8558gbw9svxf5sybmg27grymy71ar9hjnhw5xlf2"; depends=[leaps]; }; KraljicMatrix = derive2 { name="KraljicMatrix"; version="0.2.1"; sha256="0yzilmiiyzd2x3v0cnjphf0wdwiblh37kgrvmfrdy49qly48pvi2"; depends=[dplyr ggplot2 magrittr tibble]; }; - KrigInv = derive2 { name="KrigInv"; version="1.3.1"; sha256="0fcfv2vl572l8qp1ilhjai6zrw15bf1z41qm7xlfspfbj611ga7k"; depends=[DiceKriging pbivnorm randtoolbox rgenoud]; }; - L0Learn = derive2 { name="L0Learn"; version="1.0.2"; sha256="0igfmw4kpc5m6r1kj944ch48sdyx82c8imid3vrk67q2pcwqqc1a"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2]; }; + KrigInv = derive2 { name="KrigInv"; version="1.4.1"; sha256="0x12xff7lgr1v2243shfz9a8r02qs56p7i0b8j2s6bmrzj1abrwb"; depends=[anMC DiceKriging mvtnorm pbivnorm randtoolbox rgenoud]; }; + L0Learn = derive2 { name="L0Learn"; version="1.0.8"; sha256="1d29qy7b4msb6iii9gw4i3xblyb150pvnp99jm7pl2ayh0c1vnlr"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2]; }; L1pack = derive2 { name="L1pack"; version="0.38.19"; sha256="09n1045lsx1ap47mhzcqghmwwhj24kvpjjr3ysprj058jp5g7ri0"; depends=[]; }; LAGOSNE = derive2 { name="LAGOSNE"; version="1.1.0"; sha256="08sf4mm40gv9mr57pxsl1b62s2dqvbvrhy2irzqspyqk5ai2aw0m"; depends=[curl dplyr lazyeval magrittr purrr rappdirs sf stringr]; }; LAM = derive2 { name="LAM"; version="0.3-48"; sha256="12a38rvb0krfl0yffhyn7nmxcgkga46kfn4h7wzvnr0hpl5a7kjf"; depends=[CDM coda MASS numDeriv Rcpp RcppArmadillo sirt TAM]; }; @@ -1781,7 +1861,7 @@ in with self; { LARF = derive2 { name="LARF"; version="1.4"; sha256="1sqib7smgjacn07ishwls1nlbvcb6fpp1vhrjwf9g4xf9jk30i8h"; depends=[Formula]; }; LBSPR = derive2 { name="LBSPR"; version="0.1.2"; sha256="09jvdjagf4icnigbfw18z36ya4llg84fa6j2khd22cl60y81r5i3"; depends=[dplyr ggplot2 gridExtra plotrix RColorBrewer Rcpp shiny tidyr]; }; LCA = derive2 { name="LCA"; version="0.1"; sha256="14nhx2fs18558zljnw56mdz3qx30v394llhzswxhznjfiiqc9z5h"; depends=[]; }; - LCAextend = derive2 { name="LCAextend"; version="1.2"; sha256="1y9azq9v42a3z5fq6gj8js89qblb2z93k4mg4jmw0wgkyv6mysfc"; depends=[boot kinship2 mvtnorm rms]; }; + LCAextend = derive2 { name="LCAextend"; version="1.3"; sha256="1l75y3vkbsmsm3pjd5pwy0hlv6gz5ryxs4pkx9aiyhxz2y9wnhpb"; depends=[boot kinship2 mvtnorm rms]; }; LCAvarsel = derive2 { name="LCAvarsel"; version="1.1"; sha256="0aqc9rbrc8n6s9xllmamby219qsnxd4ajvffjr21qlkhkaklirb1"; depends=[doParallel foreach GA MASS memoise nnet poLCA]; }; LCF = derive2 { name="LCF"; version="1.7.0"; sha256="1n5gwnkj26b7w6bzapda049bd4aqb317cip05nf0vy04xjc8giyc"; depends=[quadprog]; }; LCFdata = derive2 { name="LCFdata"; version="2.0"; sha256="1x3vbr6hdviqvd6dxn1kb449g0q5zkfmjsmr5nxd2g82p69lv3xm"; depends=[]; }; @@ -1792,7 +1872,7 @@ in with self; { LDPD = derive2 { name="LDPD"; version="1.1.2"; sha256="1khdx8vwlpliyjc4sxcdiywbxl8lc9f5s3457vcip1j8dv537lbm"; depends=[MASS nleqslv]; }; LDRTools = derive2 { name="LDRTools"; version="0.2-1"; sha256="05srfyplsypi3whfa71lx7pnad23irpf0p7rxmrpv28jgdmrz6wf"; depends=[]; }; LDcorSV = derive2 { name="LDcorSV"; version="1.3.2"; sha256="0lvk3xz400yd3w0cjdfi6hir1ym1mffd504vycwgck5fkzljpcvx"; depends=[]; }; - LDheatmap = derive2 { name="LDheatmap"; version="0.99-4"; sha256="1xdvpydnrlzb6q4hm0rcflf0vysww1xszj6ynly6a32xqmhg0sbq"; depends=[genetics snpStats]; }; + LDheatmap = derive2 { name="LDheatmap"; version="0.99-5"; sha256="0il3g3n3bzv74lz7dlhyiwc2x2417v6yhx2g47pahxdzqa09kf4s"; depends=[genetics snpStats]; }; LDtests = derive2 { name="LDtests"; version="1.0"; sha256="1jwqr7zlp9hv7vw8xp80xvrwbdv796wjgr914v393wfa07j5wbd1"; depends=[]; }; LEANR = derive2 { name="LEANR"; version="1.4.9"; sha256="053xy13ys5hibafdnbkwqdk36hw7dhanp4frfacpfpn5f9nfh95r"; depends=[foreach igraph]; }; LEAP = derive2 { name="LEAP"; version="0.2"; sha256="1yrhanxvr7krvllqzv17qkc4wvmd7mgl57am8sn53773dbfipfc4"; depends=[]; }; @@ -1808,17 +1888,17 @@ in with self; { LINselect = derive2 { name="LINselect"; version="1.1"; sha256="1dx97pnfwlv6w00qp8b2ah8jl1arfh39x1vzry8zrxgxisq407wq"; depends=[elasticnet gtools MASS mvtnorm pls randomForest]; }; LIStest = derive2 { name="LIStest"; version="2.1"; sha256="1gk253v3f1jcr4z5ps8nrqf1n7isjhbynxsi9jq729w7h725806a"; depends=[]; }; LLM = derive2 { name="LLM"; version="1.0.0"; sha256="0x4488mg8q4nhyjhqlzkwmh51frkkjn0gir22rk8rfzg4r6d18d6"; depends=[partykit RWeka stringr]; }; - LLSR = derive2 { name="LLSR"; version="0.0.2.0"; sha256="0nxp1sfnhgf0iqfhwqvr7a0mvs3swsj2l0shcyrb3zliyd23g5ax"; depends=[digest ggtern rootSolve svDialogs XLConnect]; }; + LLSR = derive2 { name="LLSR"; version="0.0.2.1"; sha256="0sspsj12ccaxbs37dlwa2y3dnq47xdhbxskx4qj81nxb9il7151d"; depends=[digest ggplot2 rootSolve svDialogs XLConnect]; }; LMERConvenienceFunctions = derive2 { name="LMERConvenienceFunctions"; version="2.10"; sha256="08jz0i7sv7gn3bqckphbmnx0kc6yjnfvi06iyf7pcdzjaybxhj06"; depends=[fields LCFdata lme4 Matrix mgcv rgl]; }; - LMest = derive2 { name="LMest"; version="2.4.2"; sha256="0a0azn3lyy0n1882c0zxf7f1b0h26rcck8mmsbh2wxg7r3nckkrd"; depends=[MASS MultiLCIRT]; }; - LMfilteR = derive2 { name="LMfilteR"; version="0.1.1"; sha256="0wjrnzki6mnar3lxfr2mcvk98b58qkqpbb9xx7vgrw567g1ga1ig"; depends=[MASS]; }; + LMest = derive2 { name="LMest"; version="2.4.3"; sha256="0ynkm4f1ri80h5fraywyvwhrm6f6sa7hp95rzl29zc91904yycx1"; depends=[MASS mmm MultiLCIRT mvtnorm]; }; + LMfilteR = derive2 { name="LMfilteR"; version="0.1.2"; sha256="10agjrljnqw689nn9af9ihhb9sq2gmsx7l3zfmrizkavjjk67mcd"; depends=[MASS]; }; LN0SCIs = derive2 { name="LN0SCIs"; version="0.1.5"; sha256="09zr6lrvv7lw9qp3vz4n2dv0v3q7wq06wwvwpb2pm0r335bnrf89"; depends=[]; }; LNIRT = derive2 { name="LNIRT"; version="0.3.0"; sha256="1xlfk3a0x8abs6xwsm9s50nvi53s1a7nhnskhvjbi3rdzkvkrwxl"; depends=[MASS]; }; LOGICOIL = derive2 { name="LOGICOIL"; version="0.99.0"; sha256="1wgg7kigzzk5ghjn3hkjf1bb8d6mvjfmkwq64phri5jpxd742ps9"; depends=[nnet]; }; LOST = derive2 { name="LOST"; version="1.3"; sha256="01ymnczsnfml04hb6hbi041khkz2aki78qr3hriw7n3bzs5i7xim"; depends=[e1071 gdata MASS miscTools pcaMethods rgl shapes]; }; LPCM = derive2 { name="LPCM"; version="0.45-0"; sha256="15gpb59556s28npdsw1r821rld7b11y1m2m97m320n9k0z4vbk3i"; depends=[]; }; LPGraph = derive2 { name="LPGraph"; version="2.0"; sha256="1d3czxihaz3f09bfb34knqb6prhcx50kh8y4qrhhakic999z6ifw"; depends=[car PMA SDMTools]; }; - LPKsample = derive2 { name="LPKsample"; version="1.0"; sha256="0vxps8zd9zg1aw4p2qd8wamcjkbl68yvppnlvshm2ry5dahwz1wk"; depends=[apcluster igraph mclust]; }; + LPKsample = derive2 { name="LPKsample"; version="2.0"; sha256="1jg99025vk42rnjdymh3nj71npn4pmdsmk6rvnx3lykpi72f85dz"; depends=[apcluster igraph mclust]; }; LPM = derive2 { name="LPM"; version="2.7"; sha256="1anjgflj1272xrghn3s9a21f2dfggppnzjqh3p8zaid91bzg0g34"; depends=[fracdiff MASS QRM]; }; LPR = derive2 { name="LPR"; version="1.0"; sha256="16kmfm6p7cwnzpd054ik0cy0ipif6zssdfyxyfm0cijz8z4z40x7"; depends=[doParallel foreach glmnet iterators lattice Matrix slam]; }; LPS = derive2 { name="LPS"; version="1.0.10"; sha256="0gf3jmhfki01z8fm5xdx59gxvhgzqd10x2iwa8369iz9dvwbjk8j"; depends=[]; }; @@ -1830,13 +1910,13 @@ in with self; { LRTH = derive2 { name="LRTH"; version="1.3"; sha256="08vakwb7ca7956gifynzijka441yyx0wd5bq5jfhz56lzcxgfb99"; depends=[]; }; LRcontrast = derive2 { name="LRcontrast"; version="1.0"; sha256="0fs06p853r42nws2camvs87py39hb1ssxhfm6d5n9kkq81snfx4q"; depends=[DoseFinding]; }; LS2W = derive2 { name="LS2W"; version="1.3.4"; sha256="1h4vvl1gfxkdjmy6syl0gf4fv03xxxw82cxwvy10b40sf20lwmnv"; depends=[MASS wavethresh]; }; - LS2Wstat = derive2 { name="LS2Wstat"; version="2.1"; sha256="0i1b409bhvlm4hpcgm4bhd7pqk4bkcyy48d7bci254ppcr7z1m9q"; depends=[geoR LS2W matrixStats RandomFields spdep]; }; + LS2Wstat = derive2 { name="LS2Wstat"; version="2.1-1"; sha256="0y9di5n8ls4xzw0yrh0kx8c73s4wf1kzdyy8ssk6garvjln9dn9v"; depends=[geoR LS2W matrixStats RandomFields spdep]; }; LSAfun = derive2 { name="LSAfun"; version="0.5.2"; sha256="114qhnx4dr7ywh3fzkjd35xygpnn74g5nv66ahj7hf5w0gg13ws9"; depends=[lsa rgl]; }; LSAmitR = derive2 { name="LSAmitR"; version="1.0-2"; sha256="15qyij193scrvc1ghcssr6qdzxc4l4qh199s09bz5hvr62zwfdgb"; depends=[Hmisc lme4]; }; LSC = derive2 { name="LSC"; version="0.1.5"; sha256="1nlnwqb24sbgvl96azh8a833ij5xknjr2wr8shs59lm2n63a3ql9"; depends=[fields gam LICORS Matrix RColorBrewer]; }; LSD = derive2 { name="LSD"; version="4.0-0"; sha256="0fsp3pwrnnic9mzkd6yxa4bnxbvg68712lb20vd42wf6jb39r2h3"; depends=[]; }; LSDinterface = derive2 { name="LSDinterface"; version="0.4.0"; sha256="0nj4m924cj7x2djalrfyrrmycq2ha6s52m34kjgs7fc9f548lhx0"; depends=[abind]; }; - LSDsensitivity = derive2 { name="LSDsensitivity"; version="0.2.0"; sha256="1aab4djk510q35gr6vj5vx1p7jhqg2ph6fw4sjbsg60bjnr3nyyi"; depends=[abind car DiceKriging kSamples LSDinterface randtoolbox rgenoud sensitivity tseries]; }; + LSDsensitivity = derive2 { name="LSDsensitivity"; version="0.3.0"; sha256="07sjb02wx28a1zvzvapvraq9wzhn3yh111amkns3j62yrznj29hz"; depends=[abind car DiceKriging diptest kSamples lawstat LSDinterface randtoolbox rgenoud sensitivity tseries]; }; LSMonteCarlo = derive2 { name="LSMonteCarlo"; version="1.0"; sha256="0w5042phkba5dw92r67ppp2s4khjpw5mm701dh9dya9lhj88bz6s"; depends=[fBasics mvtnorm]; }; LSPFP = derive2 { name="LSPFP"; version="1.0.0"; sha256="074qd7zxa54cawipmba1khb6hyrkg553vc25gf2z0ydyv14shm0w"; depends=[bit64 data_table R_utils RCurl seqinr tcltk2]; }; LSRS = derive2 { name="LSRS"; version="0.2.0"; sha256="0p70v5vbxi1rf055mqgsp8v0lxnaj53bmbghli1764yn3x1k3iw6"; depends=[]; }; @@ -1844,10 +1924,12 @@ in with self; { LTPDvar = derive2 { name="LTPDvar"; version="1.2"; sha256="0r9v5g5y9n85jdcvm7zpapm73ism48m3mmybpcmgcs028h2ndv7v"; depends=[]; }; LTR = derive2 { name="LTR"; version="1.0.0"; sha256="15g5hbrwhab80sarbjgwzvsn6c4fl18h014kz5fpzf0n1rijybik"; depends=[]; }; LTRCtrees = derive2 { name="LTRCtrees"; version="1.1.0"; sha256="07mvbk3hwl240r46ahha0a4fzq96awk963zl8dhky51b6abp83gz"; depends=[icenReg inum partykit rpart survival]; }; + LVGP = derive2 { name="LVGP"; version="2.1.3"; sha256="0lw053jgfq20lnr3cq8r8ca579a2bcksdivdpa7gy589yphrksgs"; depends=[lattice lhs randtoolbox]; }; LW1949 = derive2 { name="LW1949"; version="1.1.0"; sha256="147ymp7j98ihp1dcz3p5v9ar6h767phjdnga5q5vf1wwa2mxawg7"; depends=[MASS mgcv plotrix]; }; LZeroSpikeInference = derive2 { name="LZeroSpikeInference"; version="1.0.3"; sha256="15x29afaq13iwlj66h97k3kczg9rfgp6i9d76rji58hfgh8i8by6"; depends=[]; }; LaF = derive2 { name="LaF"; version="0.8.0"; sha256="1nasj0502i0dbzqgm1pdvmc0wj1hk2q5fzanpcsh7zslsikiqxyq"; depends=[Rcpp]; }; - LabourMarketAreas = derive2 { name="LabourMarketAreas"; version="3.2"; sha256="08jm419cf22z144csif2ndf53743v1xl9zpa6zamd3df2snr59x2"; depends=[data_table maptools rgdal rgeos sp spdep]; }; + LabourMarketAreas = derive2 { name="LabourMarketAreas"; version="3.2.2"; sha256="16v9vwy7g7vj38pbikrinvhx2b5xdl0vd9i6yr9hhdrgqls0c243"; depends=[data_table maptools rgdal rgeos sp spdep]; }; + LadR = derive2 { name="LadR"; version="1.0.4"; sha256="04wg7p9whjna1szdkqhy5m2nbqxllwfd9q2s6h85diby7r3akglz"; depends=[L1pack]; }; Lahman = derive2 { name="Lahman"; version="6.0-0"; sha256="1616iaa28z6wrxcvvmnic5awj33b7km9yxnn8bnll9yw99ks6qk6"; depends=[dplyr]; }; LakeMetabolizer = derive2 { name="LakeMetabolizer"; version="1.5.0"; sha256="06mvdrdyl0rh9rwd0jxww0sycadcp7cj08hq35q6vyzq0jkxn2xf"; depends=[plyr rLakeAnalyzer]; }; Lambda4 = derive2 { name="Lambda4"; version="3.0"; sha256="04ikkflfr0nmy1gr3gfldlh2v8mpl82k1wwnzp57d2kn75m9vbxz"; depends=[]; }; @@ -1858,15 +1940,16 @@ in with self; { LassoBacktracking = derive2 { name="LassoBacktracking"; version="0.1.2"; sha256="1z1cnj6r6cq3b8xa9qck3ijfmzsr70r2p9m1ndakijb36pgwrzcs"; depends=[Matrix Rcpp]; }; LassoSIR = derive2 { name="LassoSIR"; version="0.1.1"; sha256="0ap8335ms12nsc7jvd48244zya54w05wj91qkhb0i63730r508c3"; depends=[glmnet]; }; Laterality = derive2 { name="Laterality"; version="0.9.3"; sha256="0pl5bfbkzhgxjjzzh99s6rh4jsq0pbcgc902i0z2lmmivgs5qmd6"; depends=[ade4]; }; + LatticeDesign = derive2 { name="LatticeDesign"; version="1.0-1"; sha256="1wlchqa7914401r0mzca4fffps99nfbj0jym1jxkclnjivdgcn24"; depends=[]; }; LatticeKrig = derive2 { name="LatticeKrig"; version="7.0"; sha256="04waq7dpp86rpa8qgrjbpl72k6vhkd300vxfc1xxy5z7k36pinqh"; depends=[fields spam]; }; Lavash = derive2 { name="Lavash"; version="1.0"; sha256="0cjl8crk0rdkyzp069fk4k0sapcjmqm3q40z5mgl0i1n59kn4s07"; depends=[glmnet MASS pracma]; }; LeArEst = derive2 { name="LeArEst"; version="0.2.0"; sha256="1492r6l0azs4ga6ia02bggk1jsx6q6rg05ins9ng6f41h04v6q3m"; depends=[conicfit doParallel foreach jpeg opencpu]; }; LeLogicielR = derive2 { name="LeLogicielR"; version="1.2.1"; sha256="0jd280ial4wfj5j6sbxgl2cbxabycsgmh2zsad7v7hcwbhhdd09i"; depends=[gdata IndependenceTests RColorBrewer xtable]; }; LeafArea = derive2 { name="LeafArea"; version="0.1.7"; sha256="0pn6hh9ipr609pi49ls8wxnx7v8q1wyp84i22zzwxyzwaap5nmj2"; depends=[]; }; LearnBayes = derive2 { name="LearnBayes"; version="2.15.1"; sha256="0ch54v2zz2yyyk0lvn5rfikdmyz1qh9j1wk3585wl8v58mc0h4cv"; depends=[]; }; - LearnGeom = derive2 { name="LearnGeom"; version="1.3"; sha256="0fqf5k3gsdxwyfcbkypqiq0ir8ay8r9bdy8iljhj308ammq0mxzk"; depends=[RgoogleMaps]; }; + LearnGeom = derive2 { name="LearnGeom"; version="1.4"; sha256="0qalhy4g47ik8cq2m1zajhv79rla8g72dmcwhnizwn6afhm6fnpm"; depends=[]; }; LendingClub = derive2 { name="LendingClub"; version="2.0.0"; sha256="13qh5p4ksvgd1pmc4mdp8p44ra34fvp3s5p5vhlkpclkv5d4mxq2"; depends=[dplyr httr jsonlite plyr readr]; }; - LexisNexisTools = derive2 { name="LexisNexisTools"; version="0.1.2"; sha256="0ziy86l6q01l471lmpldhs48xqlyw1va75np5hkzaq5wapr9pfk4"; depends=[data_table quanteda scales stringdist stringi]; }; + LexisNexisTools = derive2 { name="LexisNexisTools"; version="0.2.0"; sha256="0va8fq80133cjw37ndfwgndpim8hhk4m1i29gr1lc7phivr8dfvm"; depends=[data_table pbapply quanteda reshape2 scales stringdist stringi tibble]; }; LexisPlotR = derive2 { name="LexisPlotR"; version="0.3"; sha256="1qdgs6p11j0ign27bbnn32g65sw42982ijrig5cwqsdvxpdabjl8"; depends=[ggplot2]; }; LiblineaR = derive2 { name="LiblineaR"; version="2.10-8"; sha256="17ykazac7iv02bxl8xg948vhbdr32icdm1v4bk31zmslp4xsk08g"; depends=[]; }; LiblineaR_ACF = derive2 { name="LiblineaR.ACF"; version="1.94-2"; sha256="1ldkb63yhm1ki8i585wp5byx6y0kvclwy3ncacgcdqqk0p41cyi6"; depends=[]; }; @@ -1880,13 +1963,15 @@ in with self; { LindleyR = derive2 { name="LindleyR"; version="1.1.0"; sha256="163i604q683znp6q544hnv4vibygwvsxcfhh8m7iaqr42li3c0ak"; depends=[lamW]; }; LinearRegressionMDE = derive2 { name="LinearRegressionMDE"; version="1.0"; sha256="0nl29l10y5kpds1i4sv7jwizq61fmh5c0zpj8x64qfif4l6y4v0d"; depends=[]; }; LinkageMapView = derive2 { name="LinkageMapView"; version="2.1.2"; sha256="101g4djzkxgxbn87an2vz4s9nwn8gwz7a3p3wg0y4zpdd1pdp716"; depends=[plotrix qtl RColorBrewer]; }; - LinkedMatrix = derive2 { name="LinkedMatrix"; version="1.3.0"; sha256="1p5rg50g1pq700cx9jk4ackiyin5c2nanxq677cn840w6r11vm2g"; depends=[crochet]; }; + LinkedMatrix = derive2 { name="LinkedMatrix"; version="1.3.1"; sha256="01rsgk2v1r1jhpkvvhgqqa5lf6qncxy56f7jwfgxfig3dvgjf96r"; depends=[crochet]; }; + LipidMS = derive2 { name="LipidMS"; version="1.0.0"; sha256="0pr41rdpwxmq67k94vm91dddf6gj6r46l9jy0lwqp63f8s0dij3a"; depends=[CAMERA CHNOSZ enviPick purrr]; }; Lmoments = derive2 { name="Lmoments"; version="1.2-3"; sha256="13p0r4w16jvjnyjmkhkp3dwdfr1gap2l0k4k5jy41m8nc5fvcx79"; depends=[]; }; - LncFinder = derive2 { name="LncFinder"; version="1.0.0"; sha256="1ygbmazjm2jk0wrd13khpx8rkwd51cb50qxs2zdad0w09705mpsx"; depends=[caret e1071 seqinr]; }; + LncFinder = derive2 { name="LncFinder"; version="1.1.3"; sha256="15zsll766n97q5rf3xvc3m5s7faxiybayxjzyfhsh7q9x12qnnd7"; depends=[caret e1071 seqinr]; }; LncMod = derive2 { name="LncMod"; version="1.1"; sha256="08001y7s93i3k3478jqfh9zsgpq6ym1xmdmldi7s76zbfr1nknvy"; depends=[pheatmap survival]; }; - LncPath = derive2 { name="LncPath"; version="1.0"; sha256="1cihwlj5sv000qg2wa931yx4ca6nixgihjna4g3fh7nr5aiv6cfn"; depends=[igraph samr]; }; + LncPath = derive2 { name="LncPath"; version="1.1"; sha256="1cpsy681yq96867nr9g75xb0dilb016shqlhxpdn5xyiakrgjl4v"; depends=[igraph]; }; LocFDRPois = derive2 { name="LocFDRPois"; version="1.0.0"; sha256="0zzdp9wgwr6wn3grimghpj4vq34x37c8bqg8acfzlzih8frqal3r"; depends=[dplyr ggplot2]; }; LocalControl = derive2 { name="LocalControl"; version="1.1.1"; sha256="1fshqm6ag0scjawf2vn8zz9vrx4fv0shk2qyk60adb1ms85y8rrq"; depends=[cluster gss lattice Rcpp]; }; + LocalControlStrategy = derive2 { name="LocalControlStrategy"; version="1.3.1"; sha256="0hghj1vpfwxk1w7pc61y5l3jbsp8419nyfa9xviw99m6nyrkpma3"; depends=[cluster lattice]; }; Lock5Data = derive2 { name="Lock5Data"; version="2.8"; sha256="17awskq78h23z2dy96d7hziljhnkx5phpd48q7cppxidyvzfywim"; depends=[]; }; Lock5withR = derive2 { name="Lock5withR"; version="1.2.2"; sha256="10x3i11pb4cig4pgfmw9984na5zjbg7d41y6crakiimf53ihx0c2"; depends=[]; }; LogConcDEAD = derive2 { name="LogConcDEAD"; version="1.6-1"; sha256="1hy7fnahncpsgqxfy352lxk298i69w7drlspsgdvpzdbghca3y3i"; depends=[MASS mclust mvtnorm rgl tkrplot]; }; @@ -1900,24 +1985,25 @@ in with self; { LowWAFOMNX = derive2 { name="LowWAFOMNX"; version="1.1.1"; sha256="0f75qsv6pisgvk39yagzfxscnyfsgh63rmhp4gpybpl0pqmjp48x"; depends=[Rcpp RSQLite]; }; LowWAFOMSobol = derive2 { name="LowWAFOMSobol"; version="1.1.1"; sha256="1ym3i2m1am356di9lcp5nfmxq0np3c4bwsv6bbmf7hg02j7dhwi4"; depends=[Rcpp RSQLite]; }; LumReader = derive2 { name="LumReader"; version="0.1.0"; sha256="1h2r3c9xkwlnaicn65085bdx7y86ha2fpd5mxirqax5lm6d8lirc"; depends=[gridExtra lattice plotly shiny]; }; - Luminescence = derive2 { name="Luminescence"; version="0.8.5"; sha256="01fd7hwridcrc0vi8cmj2pvpmbqdgqnh1qjnj7mq6cxcyijzd6sg"; depends=[bbmle data_table httr magrittr matrixStats minpack_lm plotrix raster Rcpp RcppArmadillo readxl shape XML zoo]; }; + Luminescence = derive2 { name="Luminescence"; version="0.8.6"; sha256="08pgy0pdvafssxmzhnazqvxi4f03qsjidvzv6vrk6r4rfkld5244"; depends=[bbmle data_table httr magrittr matrixStats minpack_lm plotrix raster Rcpp RcppArmadillo readxl shape XML zoo]; }; M2SMF = derive2 { name="M2SMF"; version="1.0"; sha256="0hf5ckpridi70yv15h0771q1grhqr9c592r87hgba7yh55dqqcq1"; depends=[dplyr MASS]; }; M3 = derive2 { name="M3"; version="0.3"; sha256="1l40alk166lshckqp72k5zmsgm7s5mgyzxlp11l64mgncjwkw2r3"; depends=[mapdata maps ncdf4 rgdal]; }; - MADPop = derive2 { name="MADPop"; version="1.1"; sha256="1w2jbiki6d14y32p8a50b8g53m1iva2kgik14yg27z5hx1rwwq97"; depends=[BH Rcpp RcppEigen rstan StanHeaders]; }; - MAINT_Data = derive2 { name="MAINT.Data"; version="1.2.2"; sha256="12ha0lznk14ijjamp6y30srkvn8y1ppn8k4dvb4b8gaip5zzj0pp"; depends=[MASS mclust miscTools pcaPP Rcpp RcppEigen robustbase rrcov sn]; }; - MALDIquant = derive2 { name="MALDIquant"; version="1.17"; sha256="047s6007ydc38x8wm027mlb4mngz15n0d4238fr8h43wyll5zy0z"; depends=[]; }; - MALDIquantForeign = derive2 { name="MALDIquantForeign"; version="0.11.1"; sha256="1aj6gakhbpis576b264s43w55dhmd5rszj54z910plybxq8hzmir"; depends=[base64enc digest MALDIquant readBrukerFlexData readMzXmlData XML]; }; + MADPop = derive2 { name="MADPop"; version="1.1.1"; sha256="07fwzpdkh2ayvx4wkmdr93jql11rf8b31abp0gghmlbysaqnv8gp"; depends=[BH Rcpp RcppEigen rstan StanHeaders]; }; + MAGNAMWAR = derive2 { name="MAGNAMWAR"; version="2.0.4"; sha256="1asr18byrgy6bkpxpmnkczgr3dam6ymf30lw6izq112krc891bg4"; depends=[ape coxme doParallel dplyr foreach iterators lme4 multcomp plyr qqman seqinr survival]; }; + MAINT_Data = derive2 { name="MAINT.Data"; version="2.0.0"; sha256="0kp5z0jg266w4mhy1hx52h14dnyhy1fjllw7z473gj4fskikp5gg"; depends=[MASS mclust miscTools pcaPP Rcpp RcppEigen robustbase rrcov sn]; }; + MALDIquant = derive2 { name="MALDIquant"; version="1.18"; sha256="18nl214xjsxkcpbg79jkmw0yznwm5szyh2qb84n7ip46mm779ha6"; depends=[]; }; + MALDIquantForeign = derive2 { name="MALDIquantForeign"; version="0.11.5"; sha256="0qyqvmdhk1a7qz6c5jsbf274xahi9zjn2faw0jyk4wbnmfj2shii"; depends=[base64enc digest MALDIquant readBrukerFlexData readMzXmlData XML]; }; MALDIrppa = derive2 { name="MALDIrppa"; version="1.0.1"; sha256="1y2nr65cvqkvzzjsr3lmpk58lqd5rqvmzjdakhwhw4s6ymggd9hf"; depends=[lattice MALDIquant robustbase signal wmtsa]; }; MAMS = derive2 { name="MAMS"; version="1.2"; sha256="19w6ydsbr60p1cmizhhmsajzasg76r23x29qcaa7mibcb5gh1yzs"; depends=[mvtnorm]; }; MAMSE = derive2 { name="MAMSE"; version="0.2-1"; sha256="0spi7fqkxjiw5j0nf7ambcr8kpzdhjzh9y3dk23y1mrk2dgc5dkw"; depends=[]; }; MANCIE = derive2 { name="MANCIE"; version="1.4"; sha256="0940xl3z5bca6hcnj2bj341l79wajilxlxzmyz3dlgrz0b3bbdmm"; depends=[]; }; - MANOVA_RM = derive2 { name="MANOVA.RM"; version="0.2.1"; sha256="1pq1mkanp1jxyygw09p4x8cgfbkrks7g6qvzfdjgdy8kli1b3mmw"; depends=[ellipse magic MASS Matrix plotrix plyr]; }; + MANOVA_RM = derive2 { name="MANOVA.RM"; version="0.3.1"; sha256="0lxqv85hc299r28m5z4id3xdgd2dism1b1zs09qly3i6byndn4gw"; depends=[ellipse magic MASS Matrix multcomp plotrix plyr]; }; MAPA = derive2 { name="MAPA"; version="2.0.4"; sha256="02s223s58k2jk49m0xlz3q9m3nip3h4dl4v58j18z2vgi54dwnjr"; depends=[forecast RColorBrewer smooth]; }; MAPLES = derive2 { name="MAPLES"; version="1.0"; sha256="0hzsh7z1k7qazpxjqbm9842zgdpl51irg7yfd119a7b2sd3a8li9"; depends=[mgcv]; }; MAR1 = derive2 { name="MAR1"; version="1.0"; sha256="1r6j890icl5h3m2876sakmwr3c65513xnsj68sy0y0q7xj3a039l"; depends=[bestglm leaps]; }; MARSS = derive2 { name="MARSS"; version="3.10.8"; sha256="1cmkish5rbv7lpm8fnv6d33plkfvxis4r4p48bx10fll1ba11m7h"; depends=[KFAS mvtnorm nlme]; }; MARX = derive2 { name="MARX"; version="0.2"; sha256="1rc87hz719khl8mclbkfdix499nsc4nyihaaavd73nany7iprm02"; depends=[fBasics matlab metRology stabledist tseries]; }; - MASS = derive2 { name="MASS"; version="7.3-50"; sha256="16hasv9k4n773jsyzvh8s3gbga49hwdj8n5hxij6zqisy4i0kxq6"; depends=[]; }; + MASS = derive2 { name="MASS"; version="7.3-51"; sha256="0yp5ssfm9mahrp30y1hkqgjg70mzs6w065ba8h7j5ky1z6msdsdy"; depends=[]; }; MASSTIMATE = derive2 { name="MASSTIMATE"; version="1.3"; sha256="0dsqinl6998jv63m6scljszpi0qb050gj5d4wnp0pcxfs9awi2gj"; depends=[]; }; MAT = derive2 { name="MAT"; version="2.2"; sha256="093axw2zp4i3f6s9621zwibcxrracp77xrc0q5q0m4yv3m35x908"; depends=[Rcpp RcppArmadillo]; }; MATA = derive2 { name="MATA"; version="0.3"; sha256="006mnc4wqh9vdigfzrzx4csgczi0idvlwb6r23w5mmsfbn0ysdm5"; depends=[]; }; @@ -1925,9 +2011,9 @@ in with self; { MAVE = derive2 { name="MAVE"; version="1.3.8"; sha256="0zr8i21z6c4jwgqdyx7kya8k9016b7fffk4fjjxgas6yg6k2x1la"; depends=[mda Rcpp RcppArmadillo]; }; MAVIS = derive2 { name="MAVIS"; version="1.1.3"; sha256="02hi3n2rligmgg9afqwkpdny2kl68simkaqdd6k1swzlrih0fs4s"; depends=[compute_es ggplot2 irr MAc MAd metafor quantreg SCMA SCRT shiny shinyAce shinyBS weightr]; }; MAVTgsa = derive2 { name="MAVTgsa"; version="1.3"; sha256="0rzal9nsi8y873cbf6hrdyzyxnpd4r1yr9fj66cn0s1c8g93ls0y"; depends=[corpcor foreach MASS multcomp randomForest]; }; - MAc = derive2 { name="MAc"; version="1.1"; sha256="1lshi5rb8l2mpd302wskhlk5vz1wjidvbss9y69l63zjqdwjs7ch"; depends=[]; }; + MAc = derive2 { name="MAc"; version="1.1.1"; sha256="1dawqmziffaz8wgcqzwc0yifdq65abgn24vafkrwa9850048c26f"; depends=[]; }; MAclinical = derive2 { name="MAclinical"; version="1.0-5"; sha256="1g0ka1kqww2xim8rp5rznkzn0a541zvf841s3lbphfh9k3y3ixs3"; depends=[e1071 party plsgenomics st]; }; - MAd = derive2 { name="MAd"; version="0.8-2"; sha256="0mhys27rmzb0kal4jr8j2y44z4qq46fw260sxl8da9qqvplcwq1p"; depends=[]; }; + MAd = derive2 { name="MAd"; version="0.8-2.1"; sha256="096vdhfsp7bd3zvv6ydai6p230r16jx8zlqc4hlhnzma8rqypm35"; depends=[]; }; MBA = derive2 { name="MBA"; version="0.0-9"; sha256="06kmrdkhwwvr3kd5w8ws6r528hhpvbhixyj98lv36kkwlx14x06g"; depends=[BH]; }; MBC = derive2 { name="MBC"; version="0.10-4"; sha256="1fp06xx9jpz5mcxs0yppzzhch9w9c1qbsdbb60r4izrxnrhggpf7"; depends=[energy Matrix]; }; MBCluster_Seq = derive2 { name="MBCluster.Seq"; version="1.0"; sha256="0xbi2r0g0gzsy05qrq1ljr5f5s3glwxj204vk2f1lgwdx3fd116m"; depends=[]; }; @@ -1936,7 +2022,6 @@ in with self; { MBI = derive2 { name="MBI"; version="1.0"; sha256="1lb0sjwa6x360n9a9pagz6yhxh37gxq1fk0f5c3i2sd56ny9jpns"; depends=[]; }; MBSGS = derive2 { name="MBSGS"; version="1.1.0"; sha256="1h5vhmpgrqza12j7ivhwgd5wyb7kkb8mjbxl5w756vyid8g03flz"; depends=[MASS MCMCpack mgcv mnormt truncnorm]; }; MBSP = derive2 { name="MBSP"; version="1.0"; sha256="0mds6jfqgmnm4saqqqqqfcg8zh4qsvd2503g3ij1sn70f0aakwaj"; depends=[coda GIGrvg MASS Matrix MCMCpack]; }; - MBTAr = derive2 { name="MBTAr"; version="1.0.1"; sha256="0zak19pdk0wwkhl4kj1jbwx0qmqcgpmmqv3vk0wg8nwgf1l65idy"; depends=[jsonlite]; }; MBmca = derive2 { name="MBmca"; version="0.0.3-5"; sha256="0p7ddpsy4hwkfwyyszidi33qpdg4xllny7g9x24gk782p7kjfgq9"; depends=[chipPCR robustbase]; }; MC2toPath = derive2 { name="MC2toPath"; version="0.0.16"; sha256="0jdn9wpxavn2wrml907v23mfxr62wwjdh7487ihjj59g434ry7wh"; depends=[RNetCDF]; }; MCAvariants = derive2 { name="MCAvariants"; version="2.0"; sha256="0akff64v49d5r0wvspal0pz17jhz1ry4vdmj47m28gzjj69zcab0"; depends=[]; }; @@ -1948,26 +2033,28 @@ in with self; { MCMC_qpcr = derive2 { name="MCMC.qpcr"; version="1.2.3"; sha256="0b9n793spljmsb58jp41vnl9c753xqaw1g4wbi4ax348cvi09jk8"; depends=[coda ggplot2 MCMCglmm]; }; MCMC4Extremes = derive2 { name="MCMC4Extremes"; version="1.1"; sha256="06p6xdbja7vrdq4vnhybpkmyf4rkaihcmy9sc81sb0h2wa21vcq0"; depends=[evir]; }; MCMCglmm = derive2 { name="MCMCglmm"; version="2.26"; sha256="0dx3464mihnm8pf2vwr409ca5m7mvm2054x9jigazg66zsd3fxyj"; depends=[ape coda corpcor cubature Matrix tensorA]; }; - MCMCpack = derive2 { name="MCMCpack"; version="1.4-3"; sha256="0rmz1rr1y7ycxj293hhy72vajbyblnrjgqvc2qgb63xfs5svi8qq"; depends=[coda lattice MASS mcmc quantreg]; }; - MCMCprecision = derive2 { name="MCMCprecision"; version="0.3.8"; sha256="1qyhxljfcnyj7450vik4j81qilvphwc1b2xv48fnx1pnapfl45wz"; depends=[combinat Matrix Rcpp RcppArmadillo RcppEigen RcppProgress]; }; - MCMCvis = derive2 { name="MCMCvis"; version="0.11.0"; sha256="099sa541xrskn1jipx16hrgasriv4jy7jgjq9vyjwcagzh2hljz3"; depends=[coda overlapping rstan]; }; + MCMCpack = derive2 { name="MCMCpack"; version="1.4-4"; sha256="1xzrgib2mjz0xpqranhdyc5m4fmg2fir9mcf51ciw5pp53b97qcp"; depends=[coda lattice MASS mcmc quantreg]; }; + MCMCprecision = derive2 { name="MCMCprecision"; version="0.3.9"; sha256="1zmlz2kwrp1qiyvq3v5vv1rsy3s2idlifmckmgznk4nkqds5ifwh"; depends=[combinat Matrix Rcpp RcppArmadillo RcppEigen RcppProgress]; }; + MCMCvis = derive2 { name="MCMCvis"; version="0.11.2"; sha256="1b81sqvmnqmbm363llgrm61zm2yy0d0myzvv28sf6pibjijdznq8"; depends=[coda overlapping rstan]; }; MCPAN = derive2 { name="MCPAN"; version="1.1-21"; sha256="0q1m0xg8825q9zjwxcz2h2n0dyr21q5bk29qbqpdhirlwm6f1a51"; depends=[magic MCMCpack multcomp mvtnorm plyr]; }; MCPMod = derive2 { name="MCPMod"; version="1.0-10"; sha256="0ns74qhm9bzi70m9bn61zs4mmqmmxxi77f49pdrcnr8wrrnn1kdn"; depends=[lattice mvtnorm]; }; MCPerm = derive2 { name="MCPerm"; version="1.1.4"; sha256="0g65vzn43k6qrsglxd2kz245f662gl3c2gdz6qvvxa96v6q9lhh1"; depends=[metafor]; }; MCS = derive2 { name="MCS"; version="0.1.3"; sha256="1kiz1jq1bm2n8f33nsybp5jfrzzl9xbsi3m9l8818ybmph99xms6"; depends=[]; }; + MCSim = derive2 { name="MCSim"; version="1.0"; sha256="1nqry41qa5c02an5fxm3y1g3w1vcqjgsy1an95i3szz1w1ndaj14"; depends=[CircStats MASS]; }; MCTM = derive2 { name="MCTM"; version="1.0"; sha256="14xjfskyrqi0m58lkwjfjpss5j7wy3ajr148n526czrrpccg108j"; depends=[]; }; MConjoint = derive2 { name="MConjoint"; version="0.1"; sha256="02yik28mhvd4rfqwrprdbdjx9c49ds55fh042bsjajs2ip467w5c"; depends=[]; }; MDFS = derive2 { name="MDFS"; version="1.0.1"; sha256="17b9lphdgp90vcldlz4p8g1a87pf1d1vg1b8vz8xhn95cb0vr4ci"; depends=[]; }; MDM = derive2 { name="MDM"; version="1.3"; sha256="1bvjhl243rf19829ly1qc20ik937hb82lq23aiysj7ya55z8hdpf"; depends=[nnet]; }; MDMR = derive2 { name="MDMR"; version="0.5.1"; sha256="1pv57xl7pjsqxz1j8mnfmjaa36mlr749yb4c44ppdrx6khvw662x"; depends=[car CompQuadForm lme4]; }; MDPtoolbox = derive2 { name="MDPtoolbox"; version="4.0.3"; sha256="0aaw787fvcyhw6mbl42icgqfdzvfr618vg179984xqifafr40dyc"; depends=[linprog Matrix]; }; - MDSMap = derive2 { name="MDSMap"; version="1.0"; sha256="15557ca83bvsqcmsa48vispagg9a05658i22cqk706shjsp782n5"; depends=[princurve reshape rgl smacof]; }; + MDSMap = derive2 { name="MDSMap"; version="1.1"; sha256="0knrkfwgl763fwdb3ln3g5y3rarnpqdfgzxf4m045664m7gkipsg"; depends=[princurve reshape rgl smacof]; }; MDimNormn = derive2 { name="MDimNormn"; version="0.8.0"; sha256="080m0irx5v8l45fg9ig5yzcj92s3ah8a9aha288byszli1cchgpn"; depends=[]; }; MDplot = derive2 { name="MDplot"; version="1.0.1"; sha256="1xijh18hrkb807nfkdr7g642aspn5psc8nw29q387jl5hly2w8s9"; depends=[gplots gtools MASS RColorBrewer]; }; MED = derive2 { name="MED"; version="0.1.0"; sha256="0fy0qmxirkdz5kigy2r7l5czjzws0fhjxy13kv1kqh628ldrp109"; depends=[]; }; MEET = derive2 { name="MEET"; version="5.1.1"; sha256="02xz2zkwqaf1wck9a3h1j6z8dasw4j0zqa88jg6h10wqzcrlp9ba"; depends=[Hmisc KernSmooth Matrix pcaMethods ROCR seqinr seqLogo]; }; + MEGENA = derive2 { name="MEGENA"; version="1.3.7"; sha256="0cr10pmj1n831scz5kgaq3nkglr3imwgc62cxng2dvdxr9991g21"; depends=[BH cluster doParallel foreach fpc ggplot2 ggraph ggrepel igraph Matrix Rcpp reshape]; }; MEMSS = derive2 { name="MEMSS"; version="0.9-2"; sha256="0wyw8yjs4miwgwdfcnfbzvkxrgv5r3jlg3cg8q2vy7s69wvhksmy"; depends=[lme4]; }; - MEPDF = derive2 { name="MEPDF"; version="1.0"; sha256="171pzhz4z0373663mfnfi5cqd9gnj0aamwr56ag16dxm8xfyppcj"; depends=[MASS plyr pracma]; }; + MEPDF = derive2 { name="MEPDF"; version="3.0"; sha256="15hbp7g5dsdpvi239jm6jn11fn371ir6la31g0flqkilq6sr1sqd"; depends=[gtools mvtnorm plyr pracma]; }; MESS = derive2 { name="MESS"; version="0.5.2"; sha256="159vnyyab31s871j5hcqwn1g1zp18ym08jz6jcgiamwn0aprbzny"; depends=[geeM geepack glmnet kinship2 MASS Matrix mvtnorm Rcpp RcppArmadillo]; }; MEclustnet = derive2 { name="MEclustnet"; version="1.2.1"; sha256="1pznisvvgshqbixyj8jya35yhmmpxxa1ivh48c9iafgapwc4yn4s"; depends=[e1071 ellipse latentnet MASS mclust mvtnorm nnet vegan]; }; MExPosition = derive2 { name="MExPosition"; version="2.0.3"; sha256="1l27wp0psfvlkk79fhb8ypf8awardjljg1f37yj42friy9pdfksz"; depends=[ExPosition prettyGraphs]; }; @@ -1976,10 +2063,10 @@ in with self; { MFDFA = derive2 { name="MFDFA"; version="1.0"; sha256="1gy1v49525i2bhr14nvpz8rqcz3lchfnvm0g53qlln55jdndgsx4"; depends=[]; }; MFHD = derive2 { name="MFHD"; version="0.0.1"; sha256="0gb8y297y1x03wy46530psmlawyv4z5dydilk36qcmadlk1wx02k"; depends=[deldir depth depthTools fda_usc matrixStats]; }; MFKnockoffs = derive2 { name="MFKnockoffs"; version="0.9.1"; sha256="1bcdqfzmllp3dri1phy365wgc9c37wlag65pzljn4p3mf43w10nq"; depends=[corpcor glmnet gtools Matrix Rdsdp RSpectra]; }; - MFPCA = derive2 { name="MFPCA"; version="1.2-3"; sha256="0zhmhk1cihk5h4c0qpcna5m687169qxlanbjc92scwab3q8hs2i9"; depends=[abind foreach funData irlba Matrix mgcv plyr]; }; + MFPCA = derive2 { name="MFPCA"; version="1.3-1"; sha256="00kr64ih16ymigyd1w5ijkk7clif18dg5fq9g3vd9j773zqg7dh2"; depends=[abind foreach funData irlba Matrix mgcv plyr]; }; MFT = derive2 { name="MFT"; version="1.3"; sha256="029apjg1fqrqfg98jczbxfy267m3f68qxvxqjzbsw1xisq4j7wc0"; depends=[]; }; MGL = derive2 { name="MGL"; version="1.1"; sha256="03q453swnangxyc4nvjhzw2zpcy5vp1wpilap5rwymnf0c0xi4j7"; depends=[]; }; - MGLM = derive2 { name="MGLM"; version="0.1.0"; sha256="06gaz82nn7fbfv7bm9xx6dsk95xq3gircvh6knzm963r1bw8f1pk"; depends=[]; }; + MGLM = derive2 { name="MGLM"; version="0.2.0"; sha256="0yyqm53lvp59zy8lkffw9x3zhqrnh29j5v3yyzk6qrgj2slnc7nk"; depends=[]; }; MGRASTer = derive2 { name="MGRASTer"; version="0.9"; sha256="0jmf2900r56v60981sabflkhid3yrqd9xd7crb56vgfl1qkva9zp"; depends=[]; }; MGSDA = derive2 { name="MGSDA"; version="1.4"; sha256="0grwl740yvz2av5nkvmyyrr8ji5f39sjs1c5gxp6lp9p36i2wc32"; depends=[MASS]; }; MHCtools = derive2 { name="MHCtools"; version="1.1.0"; sha256="03y6m3a46bzazxkrxdrii2p1fyc26il09z5676c63rk8wz9wcxa0"; depends=[rlist]; }; @@ -1999,13 +2086,14 @@ in with self; { MImix = derive2 { name="MImix"; version="1.0"; sha256="033gxr0z2xba0pgckiigblb1xa94wrfmpgv3j122cdynjch44j4r"; depends=[]; }; MInt = derive2 { name="MInt"; version="1.0.1"; sha256="1nk02baainxk7z083yyajxrnadg2y1dnhr51fianibvph1pjjkl6"; depends=[glasso MASS testthat trust]; }; MKLE = derive2 { name="MKLE"; version="0.05"; sha256="00hcihjn3xfkzy0lvb70hl2acjkwk6s3y7l4gprix24shnblvxzi"; depends=[]; }; - MKmisc = derive2 { name="MKmisc"; version="1.0"; sha256="1ykzj9flq1nx8k7aybd2sh5rd8a2hzk4gwz0iqqsl18k1khzbdla"; depends=[ggplot2 RColorBrewer robustbase]; }; - ML_MSBD = derive2 { name="ML.MSBD"; version="1.0.0"; sha256="1myr4pnznkypb7jjpyr5iv4yh29q9kv6g8gmfh9x3wy96xy15wmz"; depends=[ape]; }; + MKmisc = derive2 { name="MKmisc"; version="1.1"; sha256="1di9dbfnbi69psk3qnrfnc62amx3ifvirw2bb783y775zpg07gz7"; depends=[ggplot2 RColorBrewer robustbase scales]; }; + ML_MSBD = derive2 { name="ML.MSBD"; version="1.1.0"; sha256="0r9v6dkfarwzryai53c4z5i5isdh8clgwfpzmjsh430zbf9vkdk2"; depends=[ape]; }; MLCIRTwithin = derive2 { name="MLCIRTwithin"; version="2.1"; sha256="07fhbhfnlmllxxdpdqiaz6d72y4pj3vrz6lw5rnlb2m7vknx51ik"; depends=[limSolve MASS MultiLCIRT]; }; MLDS = derive2 { name="MLDS"; version="0.4.5"; sha256="1a5y031kd6zx0zqlk6dvxzsv3isbvg9jap4gqad2jwryh0a9x3c1"; depends=[MASS]; }; MLEcens = derive2 { name="MLEcens"; version="0.1-4"; sha256="0zlmrcjraypscgs2v0w4s4hm7qccsmaz4hjsgqpn0058vx622945"; depends=[]; }; + MLGL = derive2 { name="MLGL"; version="0.5"; sha256="020z18x5hlc1v975a7wi6vlairl8w7prjsfsvdiydl6xh56pdrr9"; depends=[FactoMineR fastcluster gglasso MASS Matrix]; }; MLID = derive2 { name="MLID"; version="1.0.1"; sha256="0ygahmcfbydzic5q3h1ppv5b2ks4lh8mcyfqq27ssmn4g1n6hdvp"; depends=[lme4 nlme]; }; - MLML2R = derive2 { name="MLML2R"; version="0.2.1"; sha256="055gps9zv8cv08lkf14p22d7r3kidwkwkhfv45xlg6i4fzcgllxb"; depends=[]; }; + MLML2R = derive2 { name="MLML2R"; version="0.3.0"; sha256="0dwhxb20f6y8daaq5684dzwcl5qpvmbqzlmwa6nkbbchpdcphjhz"; depends=[]; }; MLPUGS = derive2 { name="MLPUGS"; version="0.2.0"; sha256="1yda37073g640g1qrkjrwa8hbyq6bjlcw3wpznx0bk5h0639bc0s"; depends=[]; }; MLZ = derive2 { name="MLZ"; version="0.1.1"; sha256="1x2mmd7rb6rk2qb84i7k71w8l14m5dvkwg1xpjqgy9lzqnwhxi45"; depends=[dplyr ggplot2 gplots RcppEigen reshape2 TMB]; }; MLmetrics = derive2 { name="MLmetrics"; version="1.1.1"; sha256="061129b36h7xqw4zsznik694n8yy9qq6aaqfhdxkhdv8n5v1nzvp"; depends=[ROCR]; }; @@ -2015,6 +2103,7 @@ in with self; { MM4LMM = derive2 { name="MM4LMM"; version="1.0.5"; sha256="1kj0kq98fqsfaj2gahn16jnfj86jq1v6jnmcs5ml944yvhmwx5n3"; depends=[Matrix Rcpp RcppEigen]; }; MMAC = derive2 { name="MMAC"; version="0.1.2"; sha256="1xwz48iizf0lvmhc7krsraabc49ky85qvgr23w4ip6jzfv4sn1jr"; depends=[]; }; MMDai = derive2 { name="MMDai"; version="1.4.0"; sha256="0bb7hg8fkmzg87xr1b2hxhy75xi461ks6w12z85k4c77kswfpx3b"; depends=[DirichletReg]; }; + MMDvariance = derive2 { name="MMDvariance"; version="0.0.9"; sha256="1yiqabifym7gdknqrhfnql6qc8p163npzrrckbyqjry3yvkqr5wi"; depends=[Biobase lawstat MASS]; }; MMMS = derive2 { name="MMMS"; version="0.1"; sha256="1a71vs3k16j14zgqfd4v92dq9swrb44n9zww8na6di82nla8afck"; depends=[glmnet survival]; }; MMPPsampler = derive2 { name="MMPPsampler"; version="1.0"; sha256="1lk5hh4ihclldrbx2pbfzxvspjaywh7mg6nhs2mjr5dcdj2h0hky"; depends=[cowplot ggplot2 gtools MASS Rcpp RcppArmadillo]; }; MMS = derive2 { name="MMS"; version="3.0.11"; sha256="0gc4iz371bi65sp49gvjh99f8jvii8l0k12kn1vbpzk4a3cw7iad"; depends=[glmnet Matrix mht]; }; @@ -2023,10 +2112,10 @@ in with self; { MNP = derive2 { name="MNP"; version="3.1-0"; sha256="06qs2vsmjs6rcpqlwfc1n5y5hzxf7pngbdmiza1wijm9hh54ikh0"; depends=[MASS]; }; MNS = derive2 { name="MNS"; version="1.0"; sha256="0if46a6rw0f2d72wnykkaa5z5b1p2c0r43il6cbwbcnnb3zd8acb"; depends=[doParallel glmnet igraph MASS mvtnorm]; }; MOCCA = derive2 { name="MOCCA"; version="1.3"; sha256="1ffpnqcrkrr7vh0f1fyyai0c2wq3v8sk2qhnhds49z7p6xrsmh21"; depends=[cclust class cluster clv]; }; - MODIS = derive2 { name="MODIS"; version="1.1.2"; sha256="1iww1rnxv2xw63b5bz7xrxb3q8dmgqzbw704gshislkhjwn37q87"; depends=[bitops devtools mapdata mapedit maps maptools ptw raster RCurl rgdal rgeos sf sp XML]; }; + MODIS = derive2 { name="MODIS"; version="1.1.4"; sha256="0pyg59z17xmsxiilsamjpxickcp22lwqafqjcahsflg9gm0f0abk"; depends=[bitops curl devtools mapdata mapedit maps maptools ptw raster rgdal rgeos sf sp]; }; MODISSnow = derive2 { name="MODISSnow"; version="0.1.0.0"; sha256="1p0mil074gapw6v8paw9595rzp85hxrfsc65llh0ljalmacwgx04"; depends=[gdalUtils lubridate raster RCurl]; }; MODISTools = derive2 { name="MODISTools"; version="1.0.0"; sha256="0b3hdj26f1s07c9k67az3xl82wixzniqaidxz8269grx7vndjmsz"; depends=[httr jsonlite tidyr]; }; - MODIStsp = derive2 { name="MODIStsp"; version="1.3.5"; sha256="0mk39dvr0msx8xas6zxpzq95bg2whk8r2dc1zggh61rfi9r9d9mn"; depends=[bitops data_table gdalUtils gWidgets gWidgetsRGtk2 httr jsonlite pacman raster rgdal rgeos sp stringr xml2 xts]; }; + MODIStsp = derive2 { name="MODIStsp"; version="1.3.6"; sha256="1kilv20pknyrgxikcf5jbah2q95g1wdsvld6a9wy41vb4as743z6"; depends=[bitops data_table gdalUtils gWidgets gWidgetsRGtk2 httr jsonlite pacman raster rgdal rgeos sp stringr xml2 xts]; }; MOEADr = derive2 { name="MOEADr"; version="1.1.0"; sha256="0q0bm13v85raq5hdfpzg4v5kj12zjh31fr1x0zv9g5blxy10dqgy"; depends=[assertthat FNN]; }; MOJOV = derive2 { name="MOJOV"; version="1.0.1"; sha256="11mcqxw83z4xx29s34v4rsbb3zvyhlb2lmvf97b77n455gsy5hab"; depends=[aod lattice saws survey]; }; MOLHD = derive2 { name="MOLHD"; version="0.2"; sha256="1lrl24x7iig15jwxigvqm3jdwnxkn948sxmywn6zi2b1a5hqz05k"; depends=[arrangements fields]; }; @@ -2037,7 +2126,9 @@ in with self; { MPDiR = derive2 { name="MPDiR"; version="0.1-16"; sha256="10g4dnysjnzf106qibqqcrxz3xw2nfh4ck1n1dlciwahr0f80j13"; depends=[]; }; MPINet = derive2 { name="MPINet"; version="1.0"; sha256="1zw3piqhhpagg5qahc2xahxxfdwdk8w94aass1virlpl0f52ik8s"; depends=[BiasedUrn mgcv]; }; MPLikelihoodWB = derive2 { name="MPLikelihoodWB"; version="1.1"; sha256="0xgj349jkv29ldia4lmsiwnkhrk99aqcrvyiy3si5knmi1jvx9q0"; depends=[MASS survival]; }; + MPN = derive2 { name="MPN"; version="0.1.0"; sha256="1hhdr9c3diy889cw4lnfiv5zy3sqdxfywy2mz58hd3ny2iql5rs1"; depends=[]; }; MPR_genotyping = derive2 { name="MPR.genotyping"; version="0.8"; sha256="0lsrbks7nhfnrmk8kclh09rc132j3divjxrzjfrg8zijbzkfx1pn"; depends=[qtl]; }; + MPS = derive2 { name="MPS"; version="2.3.0"; sha256="0rr66f3ijzvqzj6b0hl7i065r5ndzcb2r5sjhx32rihgjdg60lr3"; depends=[]; }; MPSEM = derive2 { name="MPSEM"; version="0.3-4"; sha256="0pj3gv2waxg5v1xv0qcwscq2c0g5w4w2b9ip3b761gs75mdy07g0"; depends=[ape MASS]; }; MPTinR = derive2 { name="MPTinR"; version="1.11.0"; sha256="1pflypcysc43yp4rh1lxnf7f0qklc6rl4y1mvj6ydwv5nlz52mbh"; depends=[Brobdingnag numDeriv Rcpp RcppEigen]; }; MPV = derive2 { name="MPV"; version="1.53"; sha256="14qnvcqqscd9hwn2mxf5dclv3ncj7w6vc3blxaml3rflriha6rls"; depends=[]; }; @@ -2046,8 +2137,11 @@ in with self; { MRCE = derive2 { name="MRCE"; version="2.1"; sha256="12q7mqn2qkgv992df71k1xmli61khhbfm7lw0n7z2l7qqldpiw1n"; depends=[QUIC]; }; MRCV = derive2 { name="MRCV"; version="0.3-3"; sha256="0m29mpsd3kackwrawvahi22j0aghfb12x9j18xk4x1w4bkpiscmf"; depends=[tables]; }; MRFA = derive2 { name="MRFA"; version="0.2"; sha256="1ld9bchldx4y8g0zp2nr6r439f9vqy5xcr9bkv4g4vphm2c5zq72"; depends=[fields foreach glmnet grplasso plyr randtoolbox]; }; + MRFcov = derive2 { name="MRFcov"; version="1.0.35"; sha256="05x69gh21jxh49l2pbjkw4i30psf4wx3vpi0m0bi9vsaq7qjczrr"; depends=[caret dplyr ggplot2 glmnet gridExtra igraph magrittr Matrix mgcv pbapply plyr purrr reshape2 sfsmisc]; }; MRH = derive2 { name="MRH"; version="2.2"; sha256="1icwlq8js58g9fkiq7fwjg8r97ca47xl3dscnhnga99gkgsfgjwl"; depends=[coda KMsurv survival]; }; + MRHawkes = derive2 { name="MRHawkes"; version="1.0"; sha256="0qhwm708jijv1w6iml18bg7fc2igdcmydwpb9dzpa4gwwads8b78"; depends=[IHSEP]; }; MRMR = derive2 { name="MRMR"; version="0.1.4"; sha256="0dgbhlynaaka7mdzl6igwgcdzvy6cm2y8mbxaf9pfla8w3z8y0lq"; depends=[ggplot2 lmtest lubridate plyr reshape2]; }; + MRPC = derive2 { name="MRPC"; version="2.0.0"; sha256="1gy755y2xq9fdnbgwxi32l4abyirm8q9pqwbk8rrc2c26nhdi5fb"; depends=[bnlearn compositions dynamicTreeCut fastcluster GGally graph gtools Hmisc mice network pcalg Rgraphviz sna WGCNA]; }; MRQoL = derive2 { name="MRQoL"; version="1.0"; sha256="0isn4g3jpz7wm99ymrshl6zgkb7iancdzdxl2w98n8fbxsh5z6sw"; depends=[]; }; MRS = derive2 { name="MRS"; version="1.2.4"; sha256="1sksg70zb72ys1b7vi8amjaqarmdh8vf2l1rb0rasrlvrip3z3br"; depends=[igraph Rcpp RcppArmadillo]; }; MRSP = derive2 { name="MRSP"; version="0.4.3"; sha256="0zv22xiq3qh9x3r2ckkvq1vv0vkcirh8y87053bqvw1m20j7q1by"; depends=[Formula matrixcalc]; }; @@ -2055,21 +2149,24 @@ in with self; { MRsurv = derive2 { name="MRsurv"; version="0.2"; sha256="148myzk6r8whkpv1yv59dmdlr2n8vdwmaww165aw696xfjxwq550"; depends=[mvtnorm survival]; }; MRwarping = derive2 { name="MRwarping"; version="1.0"; sha256="13bcs7rlm4irx7yzdnib558w9014a4chh9xwc010m6pxvxv36qnv"; depends=[boa SemiPar]; }; MSCMT = derive2 { name="MSCMT"; version="1.3.3"; sha256="1962lc6p5cy8pkbshzbl3jnd2pqnk9afs4lmp4qb7fqkmb4xpka3"; depends=[ggplot2 lpSolve lpSolveAPI Rdpack Rglpk]; }; + MSEtool = derive2 { name="MSEtool"; version="1.1.0"; sha256="0cckn56n8zn7srhzi6bczlg2i4qhfws43nwzjbc3har07n4h56sj"; depends=[coda corpcor DLMtool gplots MASS mvtnorm pryr r4ss RcppEigen reshape2 snowfall TMB]; }; MSG = derive2 { name="MSG"; version="0.3"; sha256="181kzkbw69bs3vir6dzgq7jzp8xcpg1p4isfb660vgnd1flb03ix"; depends=[RColorBrewer]; }; MSGARCH = derive2 { name="MSGARCH"; version="2.3"; sha256="0dax3cx0dzmg086vhymnm5x5s7ljdnxx1k52xnnvrm6pprhdgaqn"; depends=[coda expm fanplot MASS numDeriv Rcpp RcppArmadillo zoo]; }; MSGLasso = derive2 { name="MSGLasso"; version="2.1"; sha256="1k17vnvzr647pwfbdxrpqcsp34iygq86wf0ns4rq8cj6q5mik1bv"; depends=[]; }; MSIseq = derive2 { name="MSIseq"; version="1.0.0"; sha256="1v2why1k6pjsc04044nr74571p7541nciq7xkzmya3jq6dw878j3"; depends=[IRanges R_utils rJava RWeka]; }; + MSMwRA = derive2 { name="MSMwRA"; version="1.3"; sha256="0b0fqfv6iick1brqik4rqz2936nfa51i6xlfavs65r9692wks73q"; depends=[]; }; + MSPRT = derive2 { name="MSPRT"; version="1.0"; sha256="1ciiqfqpl25xvyrfp005gnkxildqkxsnzmb2slxnr8h1an0clb2g"; depends=[doParallel foreach ggplot2 iterators nleqslv]; }; MSQC = derive2 { name="MSQC"; version="1.0.2"; sha256="11wcy04cpjlnc71s2svs4lm1cp718dz1p4a1603x6zwpbf22bygn"; depends=[rgl]; }; MST = derive2 { name="MST"; version="2.1"; sha256="16mnsn2an02k4jrqb6yj0n1i563zny5v10ngfq1y28fqaw6h8yyq"; depends=[Formula MASS partykit survival]; }; - MSbox = derive2 { name="MSbox"; version="1.1"; sha256="0hal7cqfmmcsckysxnwr2qsa2b61ck4zgbdl52w1iqkkvm8qq1x9"; depends=[stringr]; }; + MSbox = derive2 { name="MSbox"; version="1.1.1"; sha256="1bw1c6yf3lnvd0rb3nwcrq3yckwnnrvck96mdq64njjldap8i152"; depends=[magick stringr xml2]; }; MScombine = derive2 { name="MScombine"; version="1.1"; sha256="0kgz1l4jlhcada3fp02dscf4zx6a22cjxj251838lfz65f512hrn"; depends=[plyr]; }; MSeasy = derive2 { name="MSeasy"; version="5.3.3"; sha256="191mvg1imxfjlnd808ypn4lsjx7n6ydf16flax79hv01z7rcjylh"; depends=[amap cluster clValid fpc mzR xcms]; }; MSeasyTkGUI = derive2 { name="MSeasyTkGUI"; version="5.3.3"; sha256="0ihz8vr2wbgy88bzssilgvlhkbr13jznfjvnqy73wpchqgwy0wy6"; depends=[MSeasy]; }; - MSwM = derive2 { name="MSwM"; version="1.3"; sha256="1ny7rzpq6x6yy0iz3ad51vwdh7i4sy60pvgdxda3jcz5wal3hgqm"; depends=[nlme]; }; + MSwM = derive2 { name="MSwM"; version="1.4"; sha256="1zhfar02s7hm4gjs1flkh9a4526d98hik8bqrksy75758baiqg7l"; depends=[nlme]; }; MTA = derive2 { name="MTA"; version="0.1.2"; sha256="1149xjq6ybjv6llzlq67j5xc6dspb4mvd72n62nlbq3zz80x7f84"; depends=[igraph rgeos sp]; }; MTDrh = derive2 { name="MTDrh"; version="0.1.0"; sha256="0ass3b90nr4i0y7v30hk8xhq3hj9bxaxcsr4f8wfi0lnvzfv6aaa"; depends=[]; }; MTE = derive2 { name="MTE"; version="1.0.0"; sha256="009mrl9dgxafl4hrgfzvsfvgx3dljb0rbbs74j2cxc5ray87kp55"; depends=[parcor quantreg]; }; - MTS = derive2 { name="MTS"; version="0.33"; sha256="0i7kpgsw56vvgrdgddn83i9lzjlb72z4llffqai29qq0m1i7hm65"; depends=[fGarch mvtnorm Rcpp]; }; + MTS = derive2 { name="MTS"; version="1.0"; sha256="09pypanjmqrvxbrrckydxyyswsgjx4nhb052x4llk7va9w4lbcjs"; depends=[fBasics fGarch mvtnorm Rcpp]; }; MTSYS = derive2 { name="MTSYS"; version="1.2.0"; sha256="04dkan3hxl3difflskp7d1lw1bvxhg4s28ssy2v4m7z7wbpj3v1m"; depends=[]; }; MTurkR = derive2 { name="MTurkR"; version="0.8.0"; sha256="0q498chr2s67ai7lfxi6kdficqbs5sxj9asyv69z2a37fmsr4va7"; depends=[base64enc curl digest XML]; }; MTurkRGUI = derive2 { name="MTurkRGUI"; version="0.1.5"; sha256="1rlgz80na0v1nx70cda1fzyswlb1lg5kcx64zl9dcqy6accsrpmp"; depends=[curl MTurkR XML]; }; @@ -2079,15 +2176,17 @@ in with self; { MVB = derive2 { name="MVB"; version="1.1"; sha256="0an8b594rknlcz6zxjva6br8f34sgwdi2jil3xh1xzb5fa55dw0f"; depends=[Rcpp RcppArmadillo]; }; MVLM = derive2 { name="MVLM"; version="0.1.4"; sha256="1zcj405dc4jbiqw6p0fcbam8yc9d6yjpmrx5wjw5zjvig3iqb91k"; depends=[CompQuadForm]; }; MVN = derive2 { name="MVN"; version="5.5"; sha256="05jl9g7jyx6a5fc8bw5si393s7f9swygma8h461v8abqbakihb2q"; depends=[boot energy kableExtra magrittr MASS moments mvoutlier nortest plyr psych robustbase]; }; - MVR = derive2 { name="MVR"; version="1.32.1"; sha256="03dbd5nib8cx0rwdi4g9fihbkdxazpvbdjh7sfnavsyyrgnqa31m"; depends=[statmod]; }; + MVNBayesian = derive2 { name="MVNBayesian"; version="0.0.8-11"; sha256="1iaxyp480v91887cn4w3l74907wvbzs3ay4cjgzd8xk2dp47w8bg"; depends=[mvtnorm plyr]; }; + MVR = derive2 { name="MVR"; version="1.33.0"; sha256="1ygz47a2p5r5axql5zsxvsn25pcqyxz6mpw50zfmzrcqdrfa3bg8"; depends=[statmod]; }; MVT = derive2 { name="MVT"; version="0.3"; sha256="0vinlv3d5daf8q7pd9xgs51nxz2njgdba5750vygmv883srlzi9d"; depends=[]; }; MVar = derive2 { name="MVar"; version="2.0.2"; sha256="0h1sm2vzjg86v3sv43pbf9fxjx5d6bxx519aa25y0r27nh9fif5y"; depends=[]; }; MVar_pt = derive2 { name="MVar.pt"; version="2.0.2"; sha256="0b7qgfa180vv2m6l5vqxqc96700srdzzix2kwccfvjimby522a1b"; depends=[]; }; MVisAGe = derive2 { name="MVisAGe"; version="0.2.1"; sha256="1plrzzj7cr2hxk1npadvjnk7sanhilh99l5vrkjjh3l6li2ym09b"; depends=[]; }; MWLasso = derive2 { name="MWLasso"; version="1.3.1"; sha256="11lyk46lmjcd60q0mixi41b8ybjgyp1xi18g3ag4450xyhw3r17s"; depends=[]; }; MWRidge = derive2 { name="MWRidge"; version="1.0.0"; sha256="17kvs9npr1ff24z3pv9x2qnfwyy6w3hc7hm60ynzbjlk2rr11xr9"; depends=[glmnet]; }; - MXM = derive2 { name="MXM"; version="1.3.5"; sha256="0pmv6qya38kxsys39qzdgh7zqjz7i052f25xmqwc5fa4l08jmm6a"; depends=[bigmemory doParallel dplyr energy foreach geepack hash knitr lme4 MASS nnet ordinal quantreg relations Rfast survival visNetwork]; }; + MXM = derive2 { name="MXM"; version="1.4.0"; sha256="1zbmysr2krkyzhnj46lc4grp1ram8axr2lkmwjsk5rv6mc1v2dfn"; depends=[bigmemory coxme doParallel dplyr energy foreach geepack knitr lme4 MASS nnet ordinal quantreg relations Rfast survival visNetwork]; }; MaXact = derive2 { name="MaXact"; version="0.2.1"; sha256="1n7af7kg54jbr09qk2a8gb9cjh25cnxzj2snscpn8sr8cmcrij0i"; depends=[mnormt]; }; + MachineShop = derive2 { name="MachineShop"; version="0.1-1"; sha256="1clina395wf9xfnfql38wmcd2m8mqg8llgraw152flqgq04k9dh4"; depends=[abind foreach ggplot2 Hmisc irr kernlab magrittr MLmetrics ModelMetrics party recipes rsample survival survivalROC]; }; Maeswrap = derive2 { name="Maeswrap"; version="1.7"; sha256="0cnnr5zq7ax1j7dx7ira7iccqppc6qpdjghjarvdb2zj0lf69yyb"; depends=[geometry lattice rgl stringr]; }; MakefileR = derive2 { name="MakefileR"; version="1.0"; sha256="1pfjic2lsar8ghbb6byr4rqrs30qrgfih092z4rxdpsiwkk3y7l1"; depends=[magrittr]; }; Mangrove = derive2 { name="Mangrove"; version="1.21"; sha256="1qf3fjzf0sb6fqbfdbxwbw6wah3gg2qran4mgg13hcmk4n3j0hxp"; depends=[]; }; @@ -2095,7 +2194,7 @@ in with self; { ManlyMix = derive2 { name="ManlyMix"; version="0.1.14"; sha256="0zpcc74965n435d4fah41r9nz0kjyn46hkjl1s0kvlllqj6n69wg"; depends=[]; }; ManyTests = derive2 { name="ManyTests"; version="1.2"; sha256="1mi7wvnkcd95126f1h8vl8skn397yd2zqvcswprqar54p161wgyi"; depends=[]; }; Map2NCBI = derive2 { name="Map2NCBI"; version="1.1"; sha256="19gafyql767f1p4fxdw7d5a8z1b4vg7jfrvzaml5x16fj6c78fjm"; depends=[]; }; - MapGAM = derive2 { name="MapGAM"; version="1.1"; sha256="0sh7qnzzahaz09nmld5p8df93my6k5vpvgmvqdlz84vghcfbfpa2"; depends=[colorspace gam maptools sp survival]; }; + MapGAM = derive2 { name="MapGAM"; version="1.2"; sha256="1909l0b5yf6c0ri8aylarkjmjnh16cjf1a4plc95yrkjk4y0ckvl"; depends=[colorspace gam maptools sp survival]; }; MareyMap = derive2 { name="MareyMap"; version="1.3.4"; sha256="1wap0syzgd0w3xla2x4bcasn8zzlj63r5yyf9r479nvifjxdqxzz"; depends=[tkrplot]; }; MargCond = derive2 { name="MargCond"; version="1.0.0"; sha256="07qh1lgy8ds11cwlb4rxkl6aiph91zq29sy27b8wwxalycdgjrg8"; depends=[gee lme4 MASS Matrix]; }; MarginalMediation = derive2 { name="MarginalMediation"; version="0.5.1"; sha256="1v7ly1yaglyh257b1q4vc7sfrk41lb4ar9dpwf5ppap581pgpz3f"; depends=[boot magrittr purrr]; }; @@ -2113,26 +2212,27 @@ in with self; { Matrix_utils = derive2 { name="Matrix.utils"; version="0.9.7"; sha256="1x64r4aj3gy1dzjjysyrk1j9jq3qsnyrqws8i6bs7q8pf6gvr7va"; depends=[grr Matrix]; }; MatrixCorrelation = derive2 { name="MatrixCorrelation"; version="0.9.2"; sha256="0s4gxgl6fsy0fnjmsdz4k7p96vl6p00xl9w2fg7v0gikjpz6h5bg"; depends=[plotrix pracma progress Rcpp RcppArmadillo RSpectra]; }; MatrixEQTL = derive2 { name="MatrixEQTL"; version="2.2"; sha256="1205jxx5aj783r2dmpawiq4rr30b60fq1qf053i7wylw07pz6vba"; depends=[]; }; - MatrixLDA = derive2 { name="MatrixLDA"; version="0.1"; sha256="19q6wl8fc6jzn7544qnlpzfh9v0xlg9cr78l6k8kx6kzjnbnyh9z"; depends=[glasso plyr Rcpp RcppArmadillo]; }; + MatrixLDA = derive2 { name="MatrixLDA"; version="0.2"; sha256="0fixq35gp0fzmin75sfld2ln0zvnjgzrhk3b5yi7wdqzp99200yy"; depends=[glasso plyr Rcpp RcppArmadillo]; }; MatrixModels = derive2 { name="MatrixModels"; version="0.4-1"; sha256="0cyfvhci2p1vr2x52ymkyqqs63x1qchn856dh2j94yb93r08x1zy"; depends=[Matrix]; }; - MaxPro = derive2 { name="MaxPro"; version="3.1-2"; sha256="1y2g8a8yvzb24dj0z82nzfr6ylplb9sbi2dmj7f3pb4s3yr5zm8y"; depends=[nloptr]; }; + MaxPro = derive2 { name="MaxPro"; version="4.1-2"; sha256="19a2wp93kx1wkbzd5bvljbm1rr96gr14w4fb0ppbgr2y2a4g8i1v"; depends=[nloptr]; }; MaxSkew = derive2 { name="MaxSkew"; version="1.1"; sha256="0x5x0jpvhp189jnmgh6d1h3ya0dicj5qfcrgr2fhp1v8jjhl125m"; depends=[]; }; MaxentVariableSelection = derive2 { name="MaxentVariableSelection"; version="1.0-3"; sha256="1cmxfdkm5k85b4ivlfy5521hkfj0gq2pb1qlxxklh0fprw87kp9c"; depends=[ggplot2 raster]; }; - MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.5.2"; sha256="0k64yzn7qnjxkxxqg5yrgq1ksdp37qfx0yc8a2n1zrdwj9f9ba2i"; depends=[dplyr lubridate rgdal rgeos rmapshaper rvest sp stringr xml2]; }; - MazamaWebUtils = derive2 { name="MazamaWebUtils"; version="0.1.5"; sha256="065l1n2nr5jsc0mdlxj10plzp8m09025hzbd8if3pn6gsl520b6l"; depends=[dplyr futile_logger stringr webutils]; }; + MazamaCoreUtils = derive2 { name="MazamaCoreUtils"; version="0.1.1"; sha256="007m6irbkmgzaraghwg9gq5rv0vhn19dlg2vi02bs1b6h3s63wix"; depends=[dplyr futile_logger lubridate stringr]; }; + MazamaSpatialUtils = derive2 { name="MazamaSpatialUtils"; version="0.5.4"; sha256="0kwwnki9f67ma6dislf0h17c0jrlqm0n8qhfi0w7g129k820i33s"; depends=[dplyr lubridate rgdal rgeos rmapshaper rvest sp stringr xml2]; }; + MazamaWebUtils = derive2 { name="MazamaWebUtils"; version="0.1.7"; sha256="16k6wxwjkdwzx1cqcxpxwaj7i63khly90gyiyfw13di43h8cvsd1"; depends=[dplyr futile_logger lubridate mime stringr webutils]; }; McSpatial = derive2 { name="McSpatial"; version="2.0"; sha256="18nmdzhszqcb5z9g8r9whxgsa0w3g7fk7852sgbahzyw750k95n4"; depends=[lattice locfit maptools quantreg RANN SparseM]; }; Mcomp = derive2 { name="Mcomp"; version="2.8"; sha256="1wz5fr3dhxn4s0qvxm2mzq9dbz3x0vgh6pixjrgk9d4i9w2p7s60"; depends=[forecast ggplot2]; }; MeanShift = derive2 { name="MeanShift"; version="1.1-1"; sha256="02zf27xvk2zlmgxfyl5pwl2rdq8c30fb52x1mbpvlhmxjbhg6fsn"; depends=[wavethresh]; }; MedDietCalc = derive2 { name="MedDietCalc"; version="0.1.0"; sha256="1gggia97ww4kiqhh2lnsmadgdxvpr36mdx1yrbgarj0sp6ilrd3l"; depends=[]; }; MedOr = derive2 { name="MedOr"; version="0.1"; sha256="1rwc14s16lnzgb78ac2017hv9pss7zw7nw3y7vrvq1qx4fgiw6f8"; depends=[]; }; MediaK = derive2 { name="MediaK"; version="1.0"; sha256="19cmxl2wksw9kvjsfn1m4nkr5gpcx6bk0sqrabj1n0dla1l32v2a"; depends=[Rcpp RcppEigen]; }; - Mediana = derive2 { name="Mediana"; version="1.0.6"; sha256="0cx2bkz5m96dirqknfsi9944rhnn14wwdimw1hq1p8c073z40i7a"; depends=[doParallel doRNG foreach MASS mvtnorm survival]; }; + Mediana = derive2 { name="Mediana"; version="1.0.7"; sha256="136yzp8c9yiiw0x8y3ym516sxx36ca3wa945xmhjwkbvz33cc22j"; depends=[doParallel doRNG foreach MASS mvtnorm survival]; }; Mega2R = derive2 { name="Mega2R"; version="1.0.4"; sha256="1c51bway05rqywvw05022cjlqzciidqz9xwz17iwf536gndc348p"; depends=[AnnotationDbi DBI gdsfmt GenomeInfoDb pedgene Rcpp RSQLite SKAT]; }; MendelianRandomization = derive2 { name="MendelianRandomization"; version="0.3.0"; sha256="1nnj4nmzrvdj2arq74bg5ckhmll2z9ydnd75ds48njbhxla2645l"; depends=[ggplot2 iterpc knitr Matrix plotly rmarkdown robustbase]; }; MenuCollection = derive2 { name="MenuCollection"; version="1.2"; sha256="0v3flicfnln9qld150yk3rfldvsr4dllhq80l02n1lq6px38nf2s"; depends=[gplots RGtk2 RGtk2Extras]; }; MergeGUI = derive2 { name="MergeGUI"; version="0.2-1"; sha256="1hx03qv5jyjjmqdvylc3kz5dl5qsdqwlirjbrnxrw7grkgkhygap"; depends=[cairoDevice ggplot2 gWidgetsRGtk2 rpart]; }; MetABEL = derive2 { name="MetABEL"; version="0.2-0"; sha256="0rqjv85mgswrbbp8b8ip6cdmz0cvfy9lm5mcr8a7h38rzgx3g3i3"; depends=[]; }; - MetFns = derive2 { name="MetFns"; version="3.2.0"; sha256="1nm7yv0cl0kl9dn284fja8a9lf77a2xaqv6v53b2f9sravj5pkfv"; depends=[astroFns lubridate plotrix pracma]; }; + MetFns = derive2 { name="MetFns"; version="3.2.2"; sha256="15fd2d0yysibi2x43qv6b8i1pa18l7z4n0zpmrqhsmvqkgy8sla0"; depends=[astroFns lubridate plotrix pracma]; }; MetNorm = derive2 { name="MetNorm"; version="0.1"; sha256="0vfi3k0yp2dz47gwj1n1avs3ji0a2nlrrljz5d0l66zfh4474jb4"; depends=[]; }; MetProc = derive2 { name="MetProc"; version="1.0.1"; sha256="1z6538pij1rq5wv9s8rjcn0sck15y26asv4vamav8a6s4135ia3q"; depends=[fastcluster gplots]; }; MetSizeR = derive2 { name="MetSizeR"; version="1.1"; sha256="11hdmpvnszr6pn9ihb3zjy9miksz1fs4piry153z4dic8pjydkax"; depends=[cairoDevice gWidgets gWidgetsRGtk2 MetabolAnalyze mvtnorm]; }; @@ -2140,14 +2240,15 @@ in with self; { MetaAnalyser = derive2 { name="MetaAnalyser"; version="0.2.1"; sha256="0k58325nb7svihhpga7kdbryr9bi5470qsb8aa5llpiggs8j7sfz"; depends=[DT ggvis rstudioapi shiny]; }; MetaComp = derive2 { name="MetaComp"; version="1.1.2"; sha256="1yb115qdmf5rxmjl4y7qr0i6668n46scs4yjpfq9bmy3w9i4ji1x"; depends=[Cairo data_table dplyr ggplot2 plyr reshape2]; }; MetaCycle = derive2 { name="MetaCycle"; version="1.1.0"; sha256="1kzdk21xpbvwibs8501zwdb9lzj7g5nv2zqaskg9x0szshhg8vpp"; depends=[gnm]; }; - MetaIntegrator = derive2 { name="MetaIntegrator"; version="1.0.3"; sha256="0611k497ixy0f51lmqzs08zqqq5krrxrm7m0xqdl18gkwrw3w656"; depends=[Biobase DBI GEOmetadb GEOquery ggplot2 gplots multtest preprocessCore reshape rmeta Rmisc RMySQL RSQLite stringr]; }; + MetaIntegrator = derive2 { name="MetaIntegrator"; version="2.0.0"; sha256="1hsv1ci0a4gjwbfs1h0lxw5sczpk7hl5ws5016zry26cyvf75gzl"; depends=[AnnotationDbi Biobase boot COCONUT data_table DBI dplyr DT GEOmetadb GEOquery ggplot2 ggpubr gplots HGNChelper magrittr manhattanly Metrics multtest pheatmap plyr pracma preprocessCore readr reshape2 rmarkdown rmeta Rmisc RMySQL ROCR RSQLite snplist stringr zoo]; }; MetaLandSim = derive2 { name="MetaLandSim"; version="1.0.4"; sha256="1dflmm59p4dkrs8iad4b4sc9qcv0x8707irf62mznczlg4mrni4z"; depends=[coda e1071 fgui googleVis igraph knitr maptools minpack_lm raster rgeos rgrass7 sp spatstat zipfR]; }; MetaLonDA = derive2 { name="MetaLonDA"; version="1.1.0"; sha256="0pmbq6f5dqq29h56wsrnq3nyk5s281jc8vh89h2wkbj9djay4bw0"; depends=[caTools DESeq2 doParallel edgeR ggplot2 gss metagenomeSeq plyr]; }; MetaPCA = derive2 { name="MetaPCA"; version="0.1.4"; sha256="14g4v3hyxnds4l2q36mpz282yqg8ahgdw3b0qmj0xg17krrf5l2s"; depends=[foreach]; }; MetaPath = derive2 { name="MetaPath"; version="1.0"; sha256="1vvpfv6yc4rd4apqfs2yzm97xxsv43ghwqnjq6w1xrc4pdx2p634"; depends=[Biobase genefilter GSEABase impute]; }; MetaQC = derive2 { name="MetaQC"; version="0.1.13"; sha256="11595ggjr46z6xiwmhiyx1sydaq68l18y7mgdwxsg81g03ck9x1r"; depends=[foreach iterators proto]; }; MetaSKAT = derive2 { name="MetaSKAT"; version="0.60"; sha256="13qffirv0lnj0bflzjpr2hd0d8j4bkakyfjvicp40f0v4v3cack2"; depends=[SKAT]; }; - MetaSubtract = derive2 { name="MetaSubtract"; version="1.42"; sha256="070j46fp0kb5g9iyd7x4nnaqi1sqxsly3fmka361nzik4pr2x8a3"; depends=[]; }; + MetaStan = derive2 { name="MetaStan"; version="0.0.1"; sha256="1byxgap5ky8z7mi7cpgv1lkm3xpc9g3pgkhcdcazx5sv4dj6rimf"; depends=[BH Rcpp RcppEigen rstan rstantools StanHeaders]; }; + MetaSubtract = derive2 { name="MetaSubtract"; version="1.43"; sha256="15xjlzzjyx581kfr33jkn7gw6pnwrd1j7ic28425wzdigm8ym6h4"; depends=[]; }; MetaboList = derive2 { name="MetaboList"; version="1.2"; sha256="15wkj29s1mxi1wzqzlh8lkr5jkw15dbc37h3hzsc0r72a3ddzf38"; depends=[enviPick]; }; MetaboQC = derive2 { name="MetaboQC"; version="1.0"; sha256="1hm0ndwda1ciyyg8igkpaalvvdyd7aq5wnl9gzza8fr1l9fxp4a2"; depends=[plyr]; }; MetabolAnalyze = derive2 { name="MetabolAnalyze"; version="1.3"; sha256="0cl76x6imx4a95wd74xx5s8i2vg8wq3inqgakvgzmkwxad6qhrqp"; depends=[ellipse gplots gtools mclust mvtnorm]; }; @@ -2160,21 +2261,22 @@ in with self; { MethodCompare = derive2 { name="MethodCompare"; version="0.1.0"; sha256="0zl20v8k8bhn3skbpzdiglywrqghwf0r42q2jn8zmq4x0drvjzpl"; depends=[nlme]; }; Methplot = derive2 { name="Methplot"; version="1.0"; sha256="0aaqss9zfn55qi45jffxkksnkw510npjnkygafx49vl77bkagqh5"; depends=[ggplot2 reshape]; }; MethylCapSig = derive2 { name="MethylCapSig"; version="1.0.1"; sha256="16ch9aldr6a9jn42h387n7qvnzs0yx28f2yj6xq0kp476q7rf4ql"; depends=[geepack]; }; - Metrics = derive2 { name="Metrics"; version="0.1.3"; sha256="1mpqbi1lihxgndfpm8b6c5hiibvnscz1b5xjgi16x2fqk3cz4i0z"; depends=[]; }; + Metrics = derive2 { name="Metrics"; version="0.1.4"; sha256="0fh8qbjlwzagh272lgwr4bxcqcjb1qpz53mgs8rzlvncax6nk5bk"; depends=[]; }; MfUSampler = derive2 { name="MfUSampler"; version="1.0.4"; sha256="0i5siq1jacxbfvakb97qnj3h7pk471rrx8ckwm0d8nl3j586s36y"; depends=[ars coda HI]; }; MiRAnorm = derive2 { name="MiRAnorm"; version="1.0.0"; sha256="154wv0j82xyc4y5cd2czh0q8kzhgrk6qsn0ahc1zn3fnrzc9fgz0"; depends=[ArgumentCheck cluster dendextend ggplot2 MASS npmv plyr reshape2]; }; MiRKAT = derive2 { name="MiRKAT"; version="1.0.1"; sha256="1adhy9ysjm8xa45sb4x17ryznvg91c9xdf0irpcgc7rbg34rxf5x"; depends=[GUniFrac MASS PearsonDS survival]; }; MiRSEA = derive2 { name="MiRSEA"; version="1.1"; sha256="0jpl6ws5yx1qjzdnip9a37nmvx81az4cbsjm57x613qjpwmg6by3"; depends=[]; }; MiSPU = derive2 { name="MiSPU"; version="1.0"; sha256="1l6q0fm5z5i6gigr940h8kc5rka08psmhcprp8grmsxk3qy2kply"; depends=[ape aSPU cluster Rcpp RcppArmadillo vegan]; }; MiST = derive2 { name="MiST"; version="1.0"; sha256="0gqln792gixqfh201xciaygmxbafa0wyv5gpbg9w5zkbbv44wrfk"; depends=[CompQuadForm]; }; - MicSim = derive2 { name="MicSim"; version="1.0.12"; sha256="186m0p08h6x8zhk82sm1hsyrqdl3p872xn03ysv3g5bldglc9677"; depends=[chron rlecuyer snowfall]; }; + MicSim = derive2 { name="MicSim"; version="1.0.13"; sha256="16j2ffl6379afhk9dx7z2lci79ywq1nhmjk070kfknlrabl8cs2n"; depends=[chron rlecuyer snowfall]; }; MicroDatosEs = derive2 { name="MicroDatosEs"; version="0.8.2"; sha256="0k0hmi3ciipizmgjw1i5rrsg34yx21s1msn40vc4qc9s1n4wd8dl"; depends=[readr]; }; MicroMacroMultilevel = derive2 { name="MicroMacroMultilevel"; version="0.4.0"; sha256="1q5cyqr4hdl1wp2isk6p4p084i83kg6hd406wdp1nj9lv5i0xvgw"; depends=[]; }; MicroStrategyR = derive2 { name="MicroStrategyR"; version="1.0-1"; sha256="0a6bk0wnwx8zy9081n7wb12lidgckrhn350r0q5m6aa82l6l8ihi"; depends=[gWidgetsRGtk2]; }; MigClim = derive2 { name="MigClim"; version="1.6"; sha256="171pnalidyw0v2fcjdc3kyrq5kg035kwj5xl8zwgn3hlanpaljvp"; depends=[raster SDMTools]; }; MindOnStats = derive2 { name="MindOnStats"; version="0.11"; sha256="13995v4n0hfb53w02jk81pl7nazkvqwwv87y1sr99jr9ppzc08mz"; depends=[]; }; Miney = derive2 { name="Miney"; version="0.1"; sha256="0sgln0653rgglinr8rns5s2az0lgyp9slmynyhhhs265grkhrfj0"; depends=[]; }; - Miso = derive2 { name="Miso"; version="0.1.1"; sha256="151klf07k5f670ssclg6bba18vfamyclz1sq3x0l9bzdvkng0lak"; depends=[S4Vectors]; }; + Minirand = derive2 { name="Minirand"; version="0.1.0"; sha256="0iahhshqxpkxhpchb4hiv7d9rir2d3zxazs2nz7ymzdlhnn41xi1"; depends=[]; }; + Miso = derive2 { name="Miso"; version="0.1.5"; sha256="1d36rnacw3rrjbrk4h0jlg13qk5d9lw77axbypbk5ng4wk47bcdp"; depends=[dplyr plotly S4Vectors]; }; MissMech = derive2 { name="MissMech"; version="1.0.2"; sha256="1b7i1balfl1cqr3l4l4wxlahk2gmawzv9rhyibwzf0yp60cb1sv9"; depends=[]; }; MissingDataGUI = derive2 { name="MissingDataGUI"; version="0.2-5"; sha256="0drbm87ka17avg6fmswjilgnz9c3azwd0236s8yfms24k9k77vnd"; depends=[cairoDevice GGally ggplot2 gWidgetsRGtk2 reshape]; }; MitISEM = derive2 { name="MitISEM"; version="1.2"; sha256="0dn398vrxh16gmy7ghh5000dgk7cbhb3gi3myrxp5dfri3ysjxcj"; depends=[mvtnorm]; }; @@ -2194,37 +2296,40 @@ in with self; { MixtureInf = derive2 { name="MixtureInf"; version="1.1"; sha256="12qcflmrpzh4w5b40xq5qicks6p0cwqpf5k84pwabkjb168afddv"; depends=[quadprog]; }; MixtureRegLTIC = derive2 { name="MixtureRegLTIC"; version="1.0.0"; sha256="052gyk4gqv49fa2rxbxnib29f1vjxiw4q8llkfhsv8kw5pw38699"; depends=[]; }; MlBayesOpt = derive2 { name="MlBayesOpt"; version="0.3.3"; sha256="0aazcf94gckgxd51r21hv3msa18br5xcq8xp03w448di546qzbnn"; depends=[data_table dplyr e1071 foreach Matrix ranger rBayesianOptimization rlang xgboost]; }; - MmgraphR = derive2 { name="MmgraphR"; version="0.2"; sha256="0al65hsqpak44w5zvdzhyh6l1q981lzyvx37hbcy0z0qn3vz16kn"; depends=[colorspace march TraMineR]; }; - MoEClust = derive2 { name="MoEClust"; version="1.1.0"; sha256="1442x2ajiib1fgj6bc3zlqy9q3bjnhnn29f7fjin99lq7c5r132p"; depends=[lattice matrixStats mclust mvnfast nnet vcd]; }; + MmgraphR = derive2 { name="MmgraphR"; version="0.3-1"; sha256="0nfv2cax2v2zhsbprwykngq5n6i5qcf8189rci9d48d5k9qm4a5r"; depends=[colorspace march msm TraMineR]; }; + MoEClust = derive2 { name="MoEClust"; version="1.2.0"; sha256="1is0k96czjqfr9z9kajz1qfqpa7b38pi1lyngzrj6y1hhgfrxywk"; depends=[lattice matrixStats mclust mvnfast nnet vcd]; }; MoLE = derive2 { name="MoLE"; version="1.0.1"; sha256="0bq19vwqjn5hl4mw5imkydbp39gal992vnh2dwrq8bb8cmj3qh91"; depends=[]; }; MoTBFs = derive2 { name="MoTBFs"; version="1.0"; sha256="09ymfgw6psc1y0dczvsrsw5cki58wn0d8vj56ydfylrxn24g3jfq"; depends=[bnlearn lpSolve quadprog]; }; Mobilize = derive2 { name="Mobilize"; version="2.16-4"; sha256="16vdvpwspa0igb52zvzyk0if9l4wq1hm8y42572i8sh1m82wyyfs"; depends=[ggplot2 Ohmage reshape2 wordcloud]; }; ModelGood = derive2 { name="ModelGood"; version="1.0.9"; sha256="1y99a7bgwx167pncxj00lbw3cdjj23fhhzl8r24hwnhxr984kvzl"; depends=[prodlim]; }; - ModelMap = derive2 { name="ModelMap"; version="3.3.5"; sha256="1rmm1a2nw91kzvxpvq9qhlag0dhihis7mgscgslqia6z8fr86qvs"; depends=[corrplot fields HandTill2001 mgcv PresenceAbsence randomForest raster rgdal]; }; - ModelMetrics = derive2 { name="ModelMetrics"; version="1.1.0"; sha256="119xxmzb5biq7k1yxqsf0jmmarmfn6lds9x9hfgv593xlpym6za8"; depends=[Rcpp]; }; + ModelMap = derive2 { name="ModelMap"; version="3.4.0.1"; sha256="1279k5hznxrb6fq4zd1baw1pm5dj5437g5awkgb8kp7ll8raa2ql"; depends=[corrplot fields HandTill2001 mgcv PresenceAbsence randomForest raster rgdal]; }; + ModelMetrics = derive2 { name="ModelMetrics"; version="1.2.0"; sha256="1sgdyrf6fbsn18gk8slir4a1yhv133kfhyg2crfs759nff4aw89h"; depends=[data_table Rcpp]; }; Modelcharts = derive2 { name="Modelcharts"; version="0.1.0"; sha256="1jy78kyyh4r13px2d5bm7fra5bkcpimzfji0hmydspkfi3qla37x"; depends=[dplyr plotly]; }; Modeler = derive2 { name="Modeler"; version="3.4.3"; sha256="1k2zwky0i15kypa9mdqc51qipah6pf1zgkrb6xc76xsavjyacfjm"; depends=[class ClassComparison ClassDiscovery e1071 neuralnet nnet oompaBase randomForest rpart TailRank]; }; MomTrunc = derive2 { name="MomTrunc"; version="1.41"; sha256="0az499xzvnczqnbh4g3h5jyz8isq0zdw0x654haac6v6045f5xav"; depends=[matrixcalc mvtnorm]; }; Momocs = derive2 { name="Momocs"; version="1.2.9"; sha256="13pgn31hv529z33mi020w8wm8ya7hyi5yfsp45a78wdhinqas9mm"; depends=[ape dplyr geometry geomorph ggplot2 jpeg magrittr MASS progress RColorBrewer rgeos sp]; }; Mondrian = derive2 { name="Mondrian"; version="1.0-0"; sha256="07r64q518diphai951pw4vfaw4sd6bqwhi6q5cp4pcl3aqjynkmj"; depends=[RColorBrewer]; }; MonetDB_R = derive2 { name="MonetDB.R"; version="1.0.1"; sha256="1r7vki0rrzwcrfg4f2lfx30g614vf2xi62qb1rs21a9j5741lxlx"; depends=[codetools DBI digest]; }; - MonetDBLite = derive2 { name="MonetDBLite"; version="0.5.1"; sha256="01gcwr5r47dkmr1y2q387xv1qr2fryq9574aijx1a39ywhvcm8pq"; depends=[codetools DBI digest]; }; + MonetDBLite = derive2 { name="MonetDBLite"; version="0.6.0"; sha256="1nwjnl40lmpykgjrhq39yldd7dn7xncg7gfcjczza680v47wxgj2"; depends=[codetools DBI digest]; }; MonoInc = derive2 { name="MonoInc"; version="1.1"; sha256="14rykw3bfj0vznz0rw4vsg1k4vanfv9cy867vspw966ncl4bw70h"; depends=[compare doParallel foreach iterators sitar]; }; MonoPhy = derive2 { name="MonoPhy"; version="1.2"; sha256="0997kg8hfwgsc9s155z0wrf7rrhn3vf6681j9psjl3hsspg08z2r"; depends=[ape phangorn phytools RColorBrewer taxize]; }; MonoPoly = derive2 { name="MonoPoly"; version="0.3-9"; sha256="130hv05fwsskk1bvr7fk8bmafq26vimkfgssjdk3zaz0hm3pxrp4"; depends=[quadprog]; }; MonteCarlo = derive2 { name="MonteCarlo"; version="1.0.5"; sha256="0a62wq448kq10mf1nhdr0nybzzz7d63nxakggpzmkzz4fz0l67bd"; depends=[abind codetools reshape rlecuyer snow snowfall]; }; Morpho = derive2 { name="Morpho"; version="2.6"; sha256="11v0lv1mfyp252y20jxlr9bym3rh8mcr2v25qhvq1133jr420lyd"; depends=[colorRamps doParallel foreach MASS Matrix Rcpp RcppArmadillo rgl Rvcg]; }; MorseGen = derive2 { name="MorseGen"; version="1.2"; sha256="1kq35n00ky70zmxb20g4mwx0hn8c5g1hw3csmd5n6892mbrri8s9"; depends=[]; }; - MortCast = derive2 { name="MortCast"; version="1.2-0"; sha256="1lmkqywcb3acfmbknxpl62n87rv4qz7hq2kyl98x8l62w6swabr6"; depends=[wpp2017]; }; - MortalityLaws = derive2 { name="MortalityLaws"; version="1.4.0"; sha256="1440fhwhmg72q7nv3cpnb658vhlkz586i17h82jjwr4v63almq8m"; depends=[minpack_lm pbapply RCurl]; }; + MortCast = derive2 { name="MortCast"; version="1.2-1"; sha256="13g78q9165b6528pflrfrcay5fl151jy13497g9xcr7dxkjr8ms9"; depends=[wpp2017]; }; + MortalityGaps = derive2 { name="MortalityGaps"; version="1.0.0"; sha256="0nfm8xa7gnshrl8hsvmvr3za8nbppp7f7i5h4ni204w7xwvh8jxc"; depends=[crch forecast MASS pbapply]; }; + MortalityLaws = derive2 { name="MortalityLaws"; version="1.6.0"; sha256="0jn9gs17a5l83w5plwmiqssffjag470xx98ff1sq7ijn9ra513ih"; depends=[minpack_lm pbapply RCurl tidyr]; }; MortalitySmooth = derive2 { name="MortalitySmooth"; version="2.3.4"; sha256="1clx8gb8jqvxcmfgv0b8jyvh39yrmcmwr472j9g3ymm95m4hr8fq"; depends=[lattice svcm]; }; MortalityTables = derive2 { name="MortalityTables"; version="1.0"; sha256="07pbjgc4qvznw1rfvmz6ndg0gzj0k61iajwn51ijpb7hscwi8937"; depends=[ggplot2 scales]; }; MotilityLab = derive2 { name="MotilityLab"; version="0.2-5"; sha256="080j548sp1c4yqqd7p7zgr70j1xyrw3fgjj1f521sgh84x5h2hbc"; depends=[ellipse]; }; MplusAutomation = derive2 { name="MplusAutomation"; version="0.7-2"; sha256="0hy6g0fgidjpz7mn1qwwdnhyxjm0v2g9r3fl32zmkvix3852qx1r"; depends=[boot coda digest ggplot2 gsubfn lattice pander plyr texreg xtable]; }; + Mqrcm = derive2 { name="Mqrcm"; version="1.0"; sha256="1z8zyjvjz1izaal5y6dnlm86pvydab45d9qnhcnibi2l9r1ladkc"; depends=[Hmisc pch]; }; MsdeParEst = derive2 { name="MsdeParEst"; version="1.7"; sha256="1zhi1jr30sl7jpsw37lc3akfzixlhm9k2hjkha1pjy5fmd5lddlx"; depends=[MASS moments mvtnorm sde]; }; + MtreeRing = derive2 { name="MtreeRing"; version="1.1"; sha256="1linz553ffmi1qhamxnj5znffpqxm8g0wgliwggjvkwrp3lqwgqx"; depends=[bmp dplR imager jpeg magick magrittr measuRing png shiny shinydashboard shinyWidgets spatstat tiff]; }; MuChPoint = derive2 { name="MuChPoint"; version="0.6.1"; sha256="15bqsc7bsjg55qxjwxh58bxbwz61a6wv4xxph994g4020b98l01x"; depends=[capushe Matrix Rcpp shiny]; }; MuFiCokriging = derive2 { name="MuFiCokriging"; version="1.2"; sha256="09p8wdmlsf21ibqyjigwdipcin3ij0naxcd035hqgfj76v20wiyv"; depends=[DiceKriging]; }; - MuMIn = derive2 { name="MuMIn"; version="1.40.4"; sha256="1xw7b74qg0ivgk3l1krjn2wrl969c41hr0y2nk0z8fw94xcfggyr"; depends=[Matrix]; }; + MuMIn = derive2 { name="MuMIn"; version="1.42.1"; sha256="1g0pp8g9d3cfk2n0g4rd3lvwg4gsqshdk1nzwb5m041iyl5j8zps"; depends=[Matrix nlme]; }; MuViCP = derive2 { name="MuViCP"; version="1.3.2"; sha256="1wkiwdz4bblxf1zr57khljqkga9ks9aj1lnidvmhib94q6b8fnf4"; depends=[gtools MASS sm]; }; MullerPlot = derive2 { name="MullerPlot"; version="0.1.2"; sha256="0am5brdmbh2mw74fbw9nha6h4qlhj8psg3142mql1ad99bd0zg4w"; depends=[RColorBrewer]; }; MultAlloc = derive2 { name="MultAlloc"; version="1.2"; sha256="0c3sqfaa08s8mk4yz77kh6q6v9ic5xp52g9prfw1k2kv4nw1k2qd"; depends=[Rglpk]; }; @@ -2232,6 +2337,7 @@ in with self; { MultNonParam = derive2 { name="MultNonParam"; version="1.2.6"; sha256="1w9kp7qswz38r2xfi8sc52kc52c8hi2jzjsh8gj4491ds1lilv0r"; depends=[]; }; MultiBD = derive2 { name="MultiBD"; version="0.2.0"; sha256="1qjfr8hx8sr5m8370yzi09r8jnh3i6907wzj3v4h83vmjh81db71"; depends=[BH Rcpp RcppParallel]; }; MultiCNVDetect = derive2 { name="MultiCNVDetect"; version="0.1-1"; sha256="0mfisblw3skm4y8phfg4wa0rdchl01wccarsq79hv63y78pfhh13"; depends=[]; }; + MultiFit = derive2 { name="MultiFit"; version="0.1.2"; sha256="0nyjyjznpl902mv9f05xzgh2y3ckv28zlp1wf87hpigly7491nyz"; depends=[data_table Rcpp RcppArmadillo]; }; MultiGHQuad = derive2 { name="MultiGHQuad"; version="1.2.0"; sha256="00prkn5awxrh365j1jz312har1x4p8v52a0sqfy00pqr44ncmqqq"; depends=[fastGHQuad Matrix mvtnorm]; }; MultiLCIRT = derive2 { name="MultiLCIRT"; version="2.11"; sha256="1qls0qp5fz377h50lvpzq3vkw49i3nvizli98gss50nqci8ssqm4"; depends=[limSolve MASS]; }; MultiMeta = derive2 { name="MultiMeta"; version="0.1"; sha256="0gj0wk39fqd21xjcah20jk16jlfrcjarspbjk5xv74c9k4p5gmak"; depends=[expm ggplot2 gtable mvtnorm reshape2]; }; @@ -2243,7 +2349,7 @@ in with self; { MultiVarMI = derive2 { name="MultiVarMI"; version="1.0"; sha256="1mlaprg3cfmfwrq7wh64fmyv1wpdnil7wpcrcg3921qydk65py6z"; depends=[BinOrdNonNor corpcor CorrToolBox Matrix moments norm PoisNonNor]; }; MultiVarSel = derive2 { name="MultiVarSel"; version="1.1.2"; sha256="07qdi43bg03xyr99361c0565m1i5kzqjbvlc2npnyjyc2ygr386d"; depends=[glmnet Matrix tidyverse]; }; MultinomialCI = derive2 { name="MultinomialCI"; version="1.0"; sha256="0ryi14d102kvxawls04hcw50n79jkcn29ill77lkfvj6nlzj8i5q"; depends=[]; }; - MultipleBubbles = derive2 { name="MultipleBubbles"; version="0.1.0"; sha256="1g6yqp53dbd96jcjgmif39zb3a7f9zil10dhqi3vz3qv6r2vsnkj"; depends=[foreach MASS]; }; + MultipleBubbles = derive2 { name="MultipleBubbles"; version="0.2.0"; sha256="047a1pql3jf500gwlap6ws5z7mx0sqmdq6jbql24nl5iypi9jqpf"; depends=[foreach MASS]; }; MultiplierDEA = derive2 { name="MultiplierDEA"; version="0.1.18"; sha256="1d7cqa44yayyhwkl5wkp68b7vxakfnlwkprs811z8c2fmfm8vk5r"; depends=[lpSolveAPI]; }; MultisiteMediation = derive2 { name="MultisiteMediation"; version="0.0.2"; sha256="1z9nh8iywlsjsrrmpm6h8hcnaqvh93dldn5rhp4wnj3c7db8qscy"; depends=[ggplot2 lme4 MASS psych statmod]; }; MultivariateRandomForest = derive2 { name="MultivariateRandomForest"; version="1.1.5"; sha256="0mww4x1hqraiyvmw2f9s6h180kplmj36hb7zfg7xlkmgdf4apk8d"; depends=[bootstrap Rcpp]; }; @@ -2253,14 +2359,14 @@ in with self; { Myrrixjars = derive2 { name="Myrrixjars"; version="1.0-2"; sha256="1hhfg83z5kl6l250z3lippx3qc68k1wj1qlfzd6m66rgmk699gyl"; depends=[rJava]; }; NADA = derive2 { name="NADA"; version="1.6-1"; sha256="1jjlm6rljk4nv6b7l2w3xnj31j61wq30sp5pnna8wav6gyjqjfmb"; depends=[survival]; }; NAEPprimer = derive2 { name="NAEPprimer"; version="1.0.1"; sha256="19p1livdnayfcl88f8r9x1vg30x522q8lgx66pfgwpkxjzvrqa2l"; depends=[]; }; - NAM = derive2 { name="NAM"; version="1.6.1"; sha256="1cyi5vc2ppwfd7bixm21cyy4z9alcx2dz316zgwnc5n3jy0wdb81"; depends=[randomForest Rcpp]; }; + NAM = derive2 { name="NAM"; version="1.6.4"; sha256="0b5dcjcn8qg9lmjfr33n8y0c67iv2yvqk0wascl71hgphqrcypm4"; depends=[randomForest Rcpp]; }; NAPPA = derive2 { name="NAPPA"; version="2.0.1"; sha256="0nn4wgl8bs7sy7v56xfif7i9az6kdz9xw7m98z1gnvl2g7damvn3"; depends=[NanoStringNorm plyr]; }; NB = derive2 { name="NB"; version="0.9"; sha256="1gh42z7lp6g09fsfmikxqzyvqp2874cx3a6vr96w43jfwmgi2diq"; depends=[]; }; NB_MClust = derive2 { name="NB.MClust"; version="1.1.1"; sha256="0hzmrszxgx3pylf9pjjwk2ryjhwz7naxxkhcqpnfjv337vv5dg0i"; depends=[MASS]; }; NBDdirichlet = derive2 { name="NBDdirichlet"; version="1.3"; sha256="1657mqwn5i1b0g0gva387zl02vpymn98f71b0p7i7xv033mqnpqw"; depends=[]; }; NBLDA = derive2 { name="NBLDA"; version="0.99.0"; sha256="1fd6f43yhwvdb81r0b9hpmna5bphhqcgwiwjkpdyqz4h9cdmsj21"; depends=[ggplot2 sSeq]; }; NBPSeq = derive2 { name="NBPSeq"; version="0.3.0"; sha256="0l4ylxhs2k9ww21jjqs67fygk92avdchhx2y1ixzl7yr2yh1y9by"; depends=[qvalue]; }; - NCA = derive2 { name="NCA"; version="2.0"; sha256="08951mmmpziljclwzmbni1s5a62wr9s80iyfsr07gkdz4sx3cvqf"; depends=[gplots KernSmooth quantreg sfa]; }; + NCA = derive2 { name="NCA"; version="3.0.1"; sha256="11ajnhx840z5122ir2ijxcwqyr535acq4dnp7mah4h1y45krfdms"; depends=[ggplot2 gplots KernSmooth lpSolve progress quantreg sfa]; }; NCSampling = derive2 { name="NCSampling"; version="1.0"; sha256="0bv93xffnzvbip86b3pg7apxzh3410mxff77q119m0z7f6vm3fam"; depends=[lattice randomForest yaImpute]; }; NCmisc = derive2 { name="NCmisc"; version="1.1.5"; sha256="1dq38ac97l8b6ys3yxqnndbrp8fa8zfw0lr4nq2421sn91769w22"; depends=[proftools]; }; NCutYX = derive2 { name="NCutYX"; version="0.1.0"; sha256="0r2ghnvrbya3p1d8rb5bsnz5v852vvc6rq65yafn2xzr7886wrg2"; depends=[fields glmnet MASS mvtnorm Rcpp RcppEigen]; }; @@ -2272,16 +2378,16 @@ in with self; { NHANES = derive2 { name="NHANES"; version="2.1.0"; sha256="0aphv3rakfcfrv2km1xyxpj1bxiazy6gwrvs7lyhxmq468fk4c9a"; depends=[]; }; NHEMOtree = derive2 { name="NHEMOtree"; version="1.0"; sha256="0ycprj2rz2fy6a7ps0bsr27iphmbfxi9pbvl8rcr6p8yagfb84mb"; depends=[emoa partykit rpart sets]; }; NHLData = derive2 { name="NHLData"; version="1.0.0"; sha256="0dfqalccbkmqrn3h1z6s78l818c8sqn7d6yc8mg872ygmszryci7"; depends=[]; }; - NHMSAR = derive2 { name="NHMSAR"; version="1.7"; sha256="14jc0zfl39yn7vkprcnv80mk1i4vp8w4wk7nz6f34cf473xbf49d"; depends=[caTools glasso lars ncvreg ucminf]; }; - NHPoisson = derive2 { name="NHPoisson"; version="3.1"; sha256="1gr682kxgw227yqw9w0iw9lrijsz5iszhnfk0mdhi6m1w9s28kcn"; depends=[car]; }; + NHMSAR = derive2 { name="NHMSAR"; version="1.12"; sha256="034cjzbwyf5jkj24wf9s6dij7g416psd2iz7fjrg34q9ax2kzyyl"; depends=[glasso lars ncvreg ucminf]; }; + NHPoisson = derive2 { name="NHPoisson"; version="3.2"; sha256="0k6m6ampp7g95d0jm5msvrgc12rqirpanb1ykbdf1ii027pqpwsn"; depends=[car]; }; NIPTeR = derive2 { name="NIPTeR"; version="1.0.2"; sha256="0ll6amqyw33a93xiccihidrnbaqlx1q7kqcd4wks7cvqawd8pgv1"; depends=[Rsamtools S4Vectors sets]; }; NIRStat = derive2 { name="NIRStat"; version="1.0"; sha256="1hi8201zslp1f7m3jci8q03y3f1zlcck2x3i793l7lsyl7qbzd1z"; depends=[ggplot2 gridExtra mgcv]; }; NISTnls = derive2 { name="NISTnls"; version="0.9-13"; sha256="03a1c8a5dr5l5x4wbclnsh3vmx3dy7migfdzdx7d7p3s7hj3ibif"; depends=[]; }; NISTunits = derive2 { name="NISTunits"; version="1.0.1"; sha256="0km9l3k9p35sb1qrhrz4ijjsdihvsp6j7cz5kh46lgf7nn6xdk7a"; depends=[]; }; NITPicker = derive2 { name="NITPicker"; version="1.0.0"; sha256="0dls638mjkl8qnfx6gnzfa2ba8w6wcnq7np8lmvp9kw7fkqxnslb"; depends=[fda fda_usc fdasrvf]; }; - NLMR = derive2 { name="NLMR"; version="0.3.0"; sha256="0cqs48jy9ydivjpmx76dyxxdhh3lww7qrmx5s8jcsxxxnn93lq8m"; depends=[checkmate dplyr fasterize purrr RandomFields raster sf spatstat tibble]; }; - NLP = derive2 { name="NLP"; version="0.1-11"; sha256="15v50gxzmpqx49wzkwxfpb5xjpg9y829a0ifys372kf1cfj521aq"; depends=[]; }; - NLPutils = derive2 { name="NLPutils"; version="0.0-4"; sha256="1dqbf8xmrzx81ybmp5qkd5a5rw3c19l2wxfnpddij4a1n074bwym"; depends=[NLP qdap SnowballC]; }; + NLMR = derive2 { name="NLMR"; version="0.3.2"; sha256="09z0spxr8wh06qmbnypqll87fhv9i0vyamqv26dcdhhrhgmidg56"; depends=[checkmate dplyr fasterize RandomFields raster sf spatstat tibble]; }; + NLP = derive2 { name="NLP"; version="0.2-0"; sha256="0xbhkrnxcbf322jfw31xcn4y2gnk5y7ccq1bz4h3prf44h0whr7w"; depends=[]; }; + NLPutils = derive2 { name="NLPutils"; version="0.0-5"; sha256="1jxxly85iajzb9qckkkar0przyxv005cyvry0qi5dkzhbyl5k490"; depends=[NLP qdap SnowballC]; }; NLRoot = derive2 { name="NLRoot"; version="1.0"; sha256="1x8mcdgqqrhyykr12bv4hl4wbh1zw2qgpnd2yrm68kb92iy95rh4"; depends=[]; }; NMF = derive2 { name="NMF"; version="0.21.0"; sha256="1qq25n3k5sgh3srlshb3ic6q92s12c1ilqf5cd5anvq6cqfchc1v"; depends=[cluster colorspace digest doParallel foreach ggplot2 gridBase pkgmaker RColorBrewer registry reshape2 rngtools stringr]; }; NMFN = derive2 { name="NMFN"; version="2.0"; sha256="0n5fxqwyvy4c1lr0glilcz1nmwqdc9krkqgqh3nlyv23djby9np5"; depends=[]; }; @@ -2296,21 +2402,22 @@ in with self; { NORMT3 = derive2 { name="NORMT3"; version="1.0-3"; sha256="041s0qwmksy3c7j45n4hhqhq3rv2hncm2fi5srjpwf9fcj5wxypg"; depends=[]; }; NORRRM = derive2 { name="NORRRM"; version="1.0.0"; sha256="06bdd5m46c8bbgmr1xkqfw72mm38pafxsvwi9p8y7znzyd0i6ag3"; depends=[ggplot2 SDMTools]; }; NORTARA = derive2 { name="NORTARA"; version="1.0.0"; sha256="1q4dmn5q939d920spmxxw08afacs3pzhr2gzwyqa5kn8xiz4ffg8"; depends=[corpcor Matrix]; }; - NPBayesImpute = derive2 { name="NPBayesImpute"; version="0.6"; sha256="09cs6nj1pw4wv4w8bd1c4rilidzx12ymjzah9d0c412bwv0gmdyl"; depends=[Rcpp]; }; NPC = derive2 { name="NPC"; version="1.1.0"; sha256="06y6vdln5zyinq9bsp66yz6i1v5bkw9pa2hknl9brwc75z359apn"; depends=[coin dplyr matlab permute]; }; NPCD = derive2 { name="NPCD"; version="1.0-10"; sha256="1ag7j1r9j3piisg706hyhq8vaqfqvm1blxpkfxx7r1impjyqzyai"; depends=[BB R_methodsS3 R_oo]; }; NPCirc = derive2 { name="NPCirc"; version="2.0.1"; sha256="1pyckjvf4vzns9hxnhnk7cm4abllmdj3f142pvjhnilyqwndqgyc"; depends=[circular misc3d movMF plotrix rgl shape]; }; NPHMC = derive2 { name="NPHMC"; version="2.2"; sha256="000x9y00gfkaj5lf00a55b9qx15x05yp3g3nmp8slyzsnfv66p5d"; depends=[smcure survival]; }; - NPMLEcmprsk = derive2 { name="NPMLEcmprsk"; version="2.1"; sha256="1v15ylgflbdr03pgh55fan1l6mymd1d5n6h9jhbcqahjlcsxkwq3"; depends=[]; }; + NPMLEcmprsk = derive2 { name="NPMLEcmprsk"; version="3.0"; sha256="0nm88fsxgrfk0j0lmir57bhxy4p8ah503gpj6jdlvjqw862jigiq"; depends=[]; }; NPMOD = derive2 { name="NPMOD"; version="0.1.0"; sha256="1m3rfgyxdbyr0m5vznav5qk70ch45wz3dc8wccxjcxrcfkn8i18k"; depends=[BSDA clinfun gWidgets nortest pspearman readxl rlang RVAideMemoire]; }; NPMVCP = derive2 { name="NPMVCP"; version="1.1"; sha256="13jpm46abwziq8859jhl6hg1znk3ws1q7g4vlr2jyri3qa6h22dd"; depends=[]; }; NPS = derive2 { name="NPS"; version="1.1"; sha256="02idja149a2sj97sks4lhsaflpifyxi6n0rjlcq9993f84szfgsi"; depends=[]; }; NPflow = derive2 { name="NPflow"; version="0.13.1"; sha256="0sq47frh665m8mibif1w3i2z5pb577v1ngdjirbya0a9chpmwc3s"; depends=[ellipse fastcluster ggplot2 gplots pheatmap Rcpp RcppArmadillo reshape2 truncnorm]; }; NPsimex = derive2 { name="NPsimex"; version="0.2-1"; sha256="1k9i1f5ckvzdns8f5qnm2zq7qs3wsgzsnfwdz21zmhmi6d0pwchm"; depends=[]; }; + NRejections = derive2 { name="NRejections"; version="1.0.0"; sha256="103cs5hlqqk4s5h63lmrqdvajgxwy6ffn3mvy0ayd0n0arppr9ry"; depends=[doParallel foreach matrixcalc mvtnorm StepwiseTest]; }; NSA = derive2 { name="NSA"; version="0.0.32"; sha256="0lnimyx3fpnw9zfhqm7y3ssvbpmvbmhcqy6fp83862imiwpl8i5r"; depends=[aroma_affymetrix aroma_core DNAcopy MASS matrixStats R_methodsS3 R_oo R_utils]; }; NSM3 = derive2 { name="NSM3"; version="1.12"; sha256="0spkzx2zm8q85h7ij9r52bsqlwgw2fsc7zw3aaz8644q0xlnjnvj"; depends=[agricolae ash binom BSDA coin combinat epitools fANCOVA gtools Hmisc km_ci MASS metafor nortest np partitions quantreg Rfit SemiPar SuppDists survival waveslim]; }; NSUM = derive2 { name="NSUM"; version="1.0"; sha256="1as4g3v7qlk9wxlpwhg293980jq9gy6qay77bbcrjf481gvkkbp6"; depends=[MASS MCMCpack]; }; NScluster = derive2 { name="NScluster"; version="1.2.0"; sha256="04mn9lh4cl1hkz27z7ldqnfwmrvqi7m1zrvscpywdcilpjmcryv0"; depends=[]; }; + NTsets = derive2 { name="NTsets"; version="1.0"; sha256="08qzrfd8yp6w8ysp2nvqpnc9y7zxws90gplm2y5ajpv0vjjg66gm"; depends=[fBasics gWidgets gWidgetsRGtk2 nortest RGtk2 RGtk2Extras tseries]; }; NUCOMBog = derive2 { name="NUCOMBog"; version="1.0.4.2"; sha256="0s6gm3adc9qdh94pxzgccbxx1f1lbgqyvd4xk37xp6f3b5hwljdz"; depends=[snowfall]; }; NameNeedle = derive2 { name="NameNeedle"; version="1.2.4"; sha256="1f8hmabwafjmgx2z381a3m84zfrd0s9x51haa4c1phq41yfq2lm5"; depends=[]; }; NanoStringNorm = derive2 { name="NanoStringNorm"; version="1.2.1"; sha256="05r1hvrxwi2mcq3pv6b699291qg120ijad96s5dah2f6cwx7gm7j"; depends=[gdata vsn XML]; }; @@ -2324,33 +2431,37 @@ in with self; { NetComp = derive2 { name="NetComp"; version="1.6"; sha256="11rxpdihn575diqfvc7yvxhlr2c19fig4v4a5c6jhqyfdsd60fsv"; depends=[gdata]; }; NetData = derive2 { name="NetData"; version="0.3"; sha256="1jf05zwy0c6gmm7kvxlwvai61bz4wpsw7cl0h4i21ipzn1rqxmqj"; depends=[]; }; NetIndices = derive2 { name="NetIndices"; version="1.4.4"; sha256="0ydivbri8l8zkxi18ghj9h66915scyhca8i9mcyq4b06mjfigss8"; depends=[MASS]; }; - NetLogoR = derive2 { name="NetLogoR"; version="0.3.3"; sha256="1msln8k3rllsb414c35pw90bral039vijjrfhd7xzk9267jcv7vk"; depends=[abind car CircStats data_table Hmisc matrixStats plyr quickPlot raster rgeos sp SpaDES_tools]; }; + NetLogoR = derive2 { name="NetLogoR"; version="0.3.4"; sha256="0vsbd650mfqwqqhsd1h92yfwc3rrirr2m29ffv8a9cwppmhkmfqp"; depends=[abind car CircStats data_table Hmisc matrixStats plyr quickPlot raster rgeos sp SpaDES_tools]; }; NetOrigin = derive2 { name="NetOrigin"; version="1.0-3"; sha256="162dhyx7z1nd3z14lfvm3dz0qwwvrc3n17zswbnwcfj6g1b1p2f1"; depends=[colorspace Hmisc igraph]; }; NetPreProc = derive2 { name="NetPreProc"; version="1.1"; sha256="0r51dqymf2nqm86py4zwdlf7qf120j0bg9r6a9c0gsyyijh4z40p"; depends=[graph]; }; NetRep = derive2 { name="NetRep"; version="1.2.1"; sha256="0adlnq22nslp8ildbrf0z26783kzgz4cyn45a981qyjbw4c42hin"; depends=[abind BH foreach RColorBrewer Rcpp RcppArmadillo RhpcBLASctl statmod]; }; NetSwan = derive2 { name="NetSwan"; version="0.1"; sha256="1mwdy3ahagiifj2bd1ajrafvnxzi74a1x1d3i2laf1hqpz3fbgld"; depends=[igraph]; }; NetWeaver = derive2 { name="NetWeaver"; version="0.0.2"; sha256="0wsmz7db8q2fycz6rfbbfs67ccj857y9zs4d80k1gnqazgj5whkn"; depends=[]; }; - NetworkChange = derive2 { name="NetworkChange"; version="0.3"; sha256="1brpa6fhmrgafmk1iw19g0pppwxi0ld0nyhx9c0fgnkn9m82isjk"; depends=[abind ggplot2 ggvis LaplacesDemon MASS MCMCpack mvtnorm RColorBrewer Rmpfr]; }; + NetworkChange = derive2 { name="NetworkChange"; version="0.4"; sha256="0vl0w7f34fxh32gi521hzyd0a47q7l9fyn53d1g5bsl5w5l9bym1"; depends=[abind ggplot2 ggvis LaplacesDemon MASS MCMCpack mvtnorm plyr RColorBrewer Rmpfr tidyr]; }; NetworkComparisonTest = derive2 { name="NetworkComparisonTest"; version="2.0.1"; sha256="09fqlnpdibf9jr5mw2pzmwi66f6cjz8rmm8jay0cv2bami7jhy2a"; depends=[IsingFit IsingSampler qgraph reshape2]; }; - NetworkDistance = derive2 { name="NetworkDistance"; version="0.1.0"; sha256="0k11crn1wiisw4qrc2yidrhdvscx59skqy4ckxdiykpb1jh5a7s4"; depends=[doParallel foreach igraph Matrix network Rcpp RcppArmadillo Rdpack RSpectra]; }; + NetworkDistance = derive2 { name="NetworkDistance"; version="0.3.0"; sha256="1s406jj0hg7aijacwcvp5li5lvdsiiba2vg5qmkdlgmvxw8zb3q8"; depends=[doParallel foreach igraph Matrix network pracma Rcpp RcppArmadillo Rdpack RSpectra]; }; NetworkExtinction = derive2 { name="NetworkExtinction"; version="0.1.0"; sha256="1scza639kf3zzz2yd9q31wsvxpvpq8hbx82a206jkxlxb4dq6vxr"; depends=[broom dplyr ggplot2 magrittr network scales sna tidyr]; }; + NetworkInference = derive2 { name="NetworkInference"; version="1.2.3"; sha256="1l30xs7342cyczk7vnnhrz8ngbl1j7y9icvyfabvi9zj87rw788q"; depends=[assertthat checkmate ggplot2 ggrepel Rcpp RcppProgress]; }; NetworkRiskMeasures = derive2 { name="NetworkRiskMeasures"; version="0.1.2"; sha256="0c10nahybjd1n0yr78ynbsdnkfa0p7kz6dx3rbwxwsp3x4mrcd6y"; depends=[dplyr expm ggplot2 Matrix]; }; - NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.1.2"; sha256="1wgiwbackqwdis1mw3nyrv3wgi8c8s49cl16f8l46yn7763nkskf"; depends=[corrplot doSNOW fdrtool foreach igraph IsingFit MASS Matrix ppcor psych pwr qgraph R_matlab]; }; - NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.5.1"; sha256="1dsjv0vm45skw74x1fz3gd7g6p52ayfwz85bh92j29mfxbnacbnn"; depends=[ggplot2 nnet reshape2 scales tidyr]; }; + NetworkToolbox = derive2 { name="NetworkToolbox"; version="1.2.1"; sha256="08a2kk8gmgawr18n38z95imaf82lp453b8dam3nn1hsa3abl5c95"; depends=[corrplot doParallel fdrtool foreach igraph MASS Matrix ppcor psych pwr qgraph R_matlab]; }; + NeuralNetTools = derive2 { name="NeuralNetTools"; version="1.5.2"; sha256="0d73rbp8v0k0j8dp4yigan7krhglx6qfbadvyg7nsj67xc00vbfd"; depends=[ggplot2 nnet reshape2 scales tidyr]; }; Newdistns = derive2 { name="Newdistns"; version="2.1"; sha256="1b5njkzj8b0wrvvfv904di0933k9d320gadmfm5zl6pzdp34bh1i"; depends=[AdequacyModel]; }; NightDay = derive2 { name="NightDay"; version="1.0.1.1"; sha256="1gwwxk428gkvci4dhfb3zikvidalpqkl0q2r6qpm58c12j14jk1h"; depends=[maps]; }; Nippon = derive2 { name="Nippon"; version="0.7.1"; sha256="1nw0kaqw5my2bx7i82q4j2qlsmc95kgjnbm9r9np3swhq6wizrmq"; depends=[stringr]; }; NipponMap = derive2 { name="NipponMap"; version="0.2"; sha256="0jk3zz05vhximbbm15h7ngb0ffxp5w8zhisifipkdgvg1hpi7pb7"; depends=[sf tibble]; }; + NitrogenUptake2016 = derive2 { name="NitrogenUptake2016"; version="0.2.3"; sha256="13mh63z3x8yqd31v5a4d10bhzk4y67ac38flwk2msv7qcx37sny6"; depends=[car MASS zoo]; }; NlcOptim = derive2 { name="NlcOptim"; version="0.5"; sha256="0chrf9ac3x1a0b86lf6wjzdsjcv5n08rav88b7xf4c31lflf1rd1"; depends=[MASS quadprog]; }; - NlinTS = derive2 { name="NlinTS"; version="1.3.2"; sha256="1isr6ci6dsbbx804y3hc8aqvhggfs7ix5yiz32dby69i85b6lj5a"; depends=[Rcpp Rdpack timeSeries]; }; + NlinTS = derive2 { name="NlinTS"; version="1.3.5"; sha256="0ihpkyzzd2k5izm84kynj211n8p3qym9hka86bzs3gm256j54q01"; depends=[Rcpp Rdpack timeSeries]; }; NlsyLinks = derive2 { name="NlsyLinks"; version="2.0.6"; sha256="1kdqifwjkkk4x1ixg3ca6lbqx79ab907nnzwxca5iw721mbk5njg"; depends=[lavaan]; }; + Nmisc = derive2 { name="Nmisc"; version="0.3.3"; sha256="1dy9m8sfrns6mnk8j79ma71dmgvanl6jsj7sykyn7pijjfazw1zq"; depends=[dplyr magrittr purrr rappdirs rlang stringr tibble]; }; NoiseFiltersR = derive2 { name="NoiseFiltersR"; version="0.1.0"; sha256="0y90si8f5hsi273g10hw700r72la30hwqlwg59gaq76wqlkm8j0p"; depends=[caret e1071 kknn MASS nnet randomForest rJava rpart RWeka]; }; NominalLogisticBiplot = derive2 { name="NominalLogisticBiplot"; version="0.2"; sha256="0m9442d9i78x57gdwyl3ckwp1m6j27cam774zkb358dw5nmwxbmz"; depends=[gmodels MASS mirt]; }; - NonCompart = derive2 { name="NonCompart"; version="0.4.3"; sha256="14wvr17p0dza11p97vmjcn27l73vmw5ms3gbrgxcxm33ybwya63n"; depends=[]; }; + NonCompart = derive2 { name="NonCompart"; version="0.4.4"; sha256="0m62jwp572z7gn4rykyr47b6cfi4sy9hxxghhlkjdclkxw7bjxx9"; depends=[]; }; NonpModelCheck = derive2 { name="NonpModelCheck"; version="3.0"; sha256="13qk2wbgpdf763q5xg29p2hxwqpml23pcgxrzmx12vnapnqfh71k"; depends=[dr]; }; - Nonpareil = derive2 { name="Nonpareil"; version="3.3.1"; sha256="0ldl90h499wwm992cj71phf3ryqvjnq0ygarcxf7h85krr4j3sx2"; depends=[]; }; + Nonpareil = derive2 { name="Nonpareil"; version="3.3.3"; sha256="02w4qxgg3snl32p41c4vg5ip7pmqcn0k3c753k5mvz41ln821sj5"; depends=[]; }; NormExpression = derive2 { name="NormExpression"; version="0.1.0"; sha256="1j4q8mb70ig40acfd9kfy12vxdvq3qpf53rxh47kkw8mywnd0449"; depends=[]; }; NormPsy = derive2 { name="NormPsy"; version="1.0.8"; sha256="13w4xjdjjg9mzmfaflc0gp306kazyvxshpj4vnl6gym3vpi9qax8"; depends=[lcmm]; }; + NormalBetaPrime = derive2 { name="NormalBetaPrime"; version="1.1"; sha256="1sik3iqwqy3wgvxip6nz4gsxh27zpmgfzvpd2251bvc870j09a9w"; depends=[GIGrvg glmnet MASS Matrix pracma pscl]; }; NormalGamma = derive2 { name="NormalGamma"; version="1.1"; sha256="0r3hhfscif0sx9v8f450yf119gpvf3ilpb8n3ziy4v4qf2jlcfnk"; depends=[histogram optimx]; }; NormalLaplace = derive2 { name="NormalLaplace"; version="0.2-0"; sha256="11z568zhb7jw9ghp6wlyf26ijm25crc5pqhzw71qgvva42nsmmwn"; depends=[DistributionUtils GeneralizedHyperbolic]; }; NormalizeMets = derive2 { name="NormalizeMets"; version="0.25"; sha256="0hnyr2aklibbvs6b6q4l0zbb9g8qmp2ds4lqic8a9alqn66sfnf2"; depends=[AUC crmn e1071 GGally ggplot2 htmlwidgets impute knitr limma plotly rmarkdown]; }; @@ -2371,10 +2482,9 @@ in with self; { OGI = derive2 { name="OGI"; version="1.0.0"; sha256="0qw55jamkvdf3vfa5c0ygbymbs4d9q15dihiqz691hdfnyjvc2mk"; depends=[lpSolve]; }; OHPL = derive2 { name="OHPL"; version="1.3"; sha256="0hm229nyv96s3sjljn5rwh89g1n6wsf24qm3ll5ccb0q2pcwnd7r"; depends=[glmnet mvtnorm pls]; }; OIdata = derive2 { name="OIdata"; version="1.0"; sha256="078khxrszwnrww2h0ag153bf59fnyhirxy4m56ssgr2gmfahaymf"; depends=[maps RCurl]; }; - OIsurv = derive2 { name="OIsurv"; version="0.2"; sha256="148mpjj5navc1vrl72y87krn4lf3awnd32z3g4qqaia404w5w7p7"; depends=[KMsurv survival]; }; OLScurve = derive2 { name="OLScurve"; version="0.2.0"; sha256="1zqapfwgwy9rxnbhmlgplkphw1bdia4cyi9q6iwcppw3rjw75f1n"; depends=[lattice]; }; ONETr = derive2 { name="ONETr"; version="1.0.3"; sha256="14l56qcmyyk2ivcfkfv7j2k4i1mfrngpi9zcc88w6xfhz5qlb548"; depends=[plyr RCurl XML]; }; - OOBCurve = derive2 { name="OOBCurve"; version="0.2"; sha256="1dr2mp2wi2dir1h5w3rw17154byfy3gx02x2kz1r67l9dfgrr505"; depends=[mlr randomForest ranger]; }; + OOBCurve = derive2 { name="OOBCurve"; version="0.3"; sha256="1i7prybs3b60ipl34zrq6mcr6w9kc1d44b14mxcd752k42k6xs2r"; depends=[mlr randomForest ranger]; }; OOR = derive2 { name="OOR"; version="0.1.2"; sha256="1zw7g0365znyn828qqsn83l2a837wwj9cx7dzcbns28vhqmsn6hm"; depends=[]; }; OOmisc = derive2 { name="OOmisc"; version="1.2"; sha256="09vaxn5czsgn6wpr27lka40kzd76jzqgqxavf26ms3m9kkdf83g4"; depends=[]; }; OPDOE = derive2 { name="OPDOE"; version="1.0-10"; sha256="04z944i4f3i0cjnxh32wf7n2dfyynnvkz4lxdkn90flam2np58yv"; depends=[crossdes gmp mvtnorm nlme orthopolynom polynom]; }; @@ -2385,6 +2495,7 @@ in with self; { ORIClust = derive2 { name="ORIClust"; version="1.0-1"; sha256="1biddddyls2zsg71w4innxl0ckfb80q2j9pmd56wvbc0qnbm0w3q"; depends=[]; }; ORMDR = derive2 { name="ORMDR"; version="1.3-2"; sha256="0y7b2aja3zvsd6lm7jal9pabcfxv16r2wh0kyzjkdfanvvgk3wmm"; depends=[]; }; OSCV = derive2 { name="OSCV"; version="1.0"; sha256="17wrfak6b6m2l3iqbhdwcfh0rlqb14rkvrbari7v46gya9v7hq20"; depends=[mc2d]; }; + OSDR = derive2 { name="OSDR"; version="1.1"; sha256="0wwyqsvni3szbmq953bhxld4172jp1knr2farw06b0bbdglx3q7w"; depends=[]; }; OSMscale = derive2 { name="OSMscale"; version="0.5.1"; sha256="0rjhyhh1iafgd9h1pbd2clyg2sh0gg7y1aqmiislqyn6h6jrvgqn"; depends=[berryFunctions OpenStreetMap sp]; }; OSTSC = derive2 { name="OSTSC"; version="0.0.1"; sha256="0p92w25xvajsn44rd5hg1m7l9l4m0rpmw175nnqr438432hqh7cc"; depends=[doParallel doSNOW fields foreach MASS]; }; OTE = derive2 { name="OTE"; version="1.0"; sha256="18w483syhs523yfib9sibzmj16bypqxk4sc4771kfr1958h3igai"; depends=[randomForest]; }; @@ -2397,10 +2508,11 @@ in with self; { OceanView = derive2 { name="OceanView"; version="1.0.4"; sha256="072gjbka7ncp5sa463kbi06fjx7nm1ljgzpx4b7ybq9pcwvnyzz6"; depends=[plot3D plot3Drgl rgl shape]; }; Ohit = derive2 { name="Ohit"; version="1.0.0"; sha256="132d4drc2phw9ppxnczb1ycdg3dv085k8p6bcaj3v866j0hfxjgb"; depends=[]; }; Ohmage = derive2 { name="Ohmage"; version="2.11-4"; sha256="14pga59ikiywyl6xnfd2d8sy323vyn88q9sf101bcwp0s0qczwzg"; depends=[RCurl RJSONIO]; }; - OjaNP = derive2 { name="OjaNP"; version="0.9-9"; sha256="12a7zfrk3rdvfby5qa511w3nk5jpnsd5gg2z46b5s97rxb3qq7za"; depends=[ICS ICSNP Rcpp]; }; + OjaNP = derive2 { name="OjaNP"; version="0.9-10"; sha256="1kljbnwky6b9d6sakarhw6ckrjbrpw117d81ykgl5z7l4p6cvvsh"; depends=[ICS ICSNP Rcpp]; }; OligoSpecificitySystem = derive2 { name="OligoSpecificitySystem"; version="1.3"; sha256="17mspf1ph2ybv046zckykfdcbrsiz40hrs6ib5mpwkfnrvsp1w7l"; depends=[tkrplot]; }; OmicKriging = derive2 { name="OmicKriging"; version="1.4.0"; sha256="08frr38yf5d0l3zwkbq9465xrbyzsn8sx9icqc3yvfnxrkhrpzig"; depends=[doParallel foreach irlba ROCR]; }; OmicsPLS = derive2 { name="OmicsPLS"; version="1.1.0"; sha256="16q226y8wshjdry538w6zk116rip97hr5bfjyz8g960gy40pjn6j"; depends=[ggplot2]; }; + Omisc = derive2 { name="Omisc"; version="0.1.0"; sha256="1dii0hr9sbza0vgxqgr3mzsbmx8b5189x9qi4is8zkn5nsl78pk8"; depends=[MASS psych]; }; OnAge = derive2 { name="OnAge"; version="1.0.1"; sha256="1zby5sf92c185b5m19jv4ndgbv6mz107nc47zn1d6bijrypzpc20"; depends=[]; }; Oncotree = derive2 { name="Oncotree"; version="0.3.3"; sha256="147rc9ci66lxbb91ys2ig40sgmldi15p604yysrd4ccbxpbk2zwf"; depends=[boot]; }; OneArmPhaseTwoStudy = derive2 { name="OneArmPhaseTwoStudy"; version="1.0.3"; sha256="0q8g33s1jq0ipvwq83xhrly8idsh68licgyivxc628zbm1id5p38"; depends=[Rcpp]; }; @@ -2409,13 +2521,14 @@ in with self; { OpVaR = derive2 { name="OpVaR"; version="1.0.5"; sha256="14kq95i8n0g1wy3s32llw3803qzkxlyz9307clc1bwzi0wp22x5f"; depends=[actuar evmix goftest MASS pracma ReIns tea truncnorm vcd VineCopula]; }; OpasnetUtils = derive2 { name="OpasnetUtils"; version="1.3"; sha256="0mmn4dpk1wl8slg55xzhpk7jdwhkrka53rwmrsr73sikkh3mcyfn"; depends=[digest ggplot2 httpRequest igraph plyr RCurl reshape2 rgdal rjson sp triangle xtable]; }; OpenCL = derive2 { name="OpenCL"; version="0.1-3"; sha256="0f7vis0jcp0nh808xbzc73vj7kdcjb0qqzzsh3gvgamzbjfslch8"; depends=[]; }; - OpenImageR = derive2 { name="OpenImageR"; version="1.0.8"; sha256="1j7p1wrzznrisbzw8j1qsxyyv3zr5hk6q9yxw97y6lrfh3c26ig1"; depends=[jpeg png Rcpp RcppArmadillo shiny tiff]; }; + OpenImageR = derive2 { name="OpenImageR"; version="1.1.1"; sha256="0g2s3qgzbfmz89qiybflzqxsx60n9rr3718vg155hg117xnchr5c"; depends=[jpeg png R6 Rcpp RcppArmadillo shiny tiff]; }; OpenML = derive2 { name="OpenML"; version="1.8"; sha256="04m2gi35hykqs4iy3ipvi41cmkv8vg145cpafjrsf98kj7jg4pmv"; depends=[backports BBmisc checkmate curl data_table digest httr jsonlite memoise mlr ParamHelpers stringi XML]; }; OpenMPController = derive2 { name="OpenMPController"; version="0.2-5"; sha256="00hs8v47pr2d726z8izkfrgmayw147hdm16rr9rw1zs3ad216zjj"; depends=[]; }; - OpenMx = derive2 { name="OpenMx"; version="2.9.9"; sha256="02p125r83r63zjysd94s1wvmxp1gh38dpqs3r8ly5qzdx5jzk5yf"; depends=[BH digest MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; + OpenMx = derive2 { name="OpenMx"; version="2.11.5"; sha256="19vsy1dc25jix0jxysdwbgsv0d8yv1p62jzvv8zvrwapk0rfyy0z"; depends=[BH digest MASS Matrix Rcpp RcppEigen rpf StanHeaders]; }; OpenRepGrid = derive2 { name="OpenRepGrid"; version="0.1.12"; sha256="02p9b2y99z9yrrm2pl86p0yqwah0yjic2wdcd4k0mhccimmmkaip"; depends=[abind colorspace GPArotation openxlsx plyr psych pvclust rgl stringr XML]; }; OpenStreetMap = derive2 { name="OpenStreetMap"; version="0.3.3"; sha256="099vdyq0vw9xl5v7zggdb8yd4zl7x8imvvbj5j2f5hrspgg131pz"; depends=[ggplot2 raster rgdal rJava sp]; }; Opportunistic = derive2 { name="Opportunistic"; version="1.2"; sha256="0kaj11ziij1v65l972x4kbr7vzkx4dwa27ymabiip4dg57a976wr"; depends=[]; }; + Opt5PL = derive2 { name="Opt5PL"; version="0.1.1"; sha256="0v3ibfzmkfnkhxylhaqcd3yqygsk7027ga12vb6gj4h4zcccf17f"; depends=[matrixcalc Rcpp]; }; OptGS = derive2 { name="OptGS"; version="1.1.1"; sha256="1acwwjng5ri5vganv7b5pagp7524ifr0q8h1pbfb5g6z3x6w08kh"; depends=[]; }; OptHedging = derive2 { name="OptHedging"; version="1.0"; sha256="0g7qaf5abvbcqv2h1dciwn3gwpz084ryqjjk0yabdm4ym0y38ddm"; depends=[]; }; OptInterim = derive2 { name="OptInterim"; version="3.0.1"; sha256="1ks24yv5jjhlvscwjppad27iass59da1mls99hlif0li9mvkbvyk"; depends=[clinfun mvtnorm]; }; @@ -2442,9 +2555,9 @@ in with self; { OutrankingTools = derive2 { name="OutrankingTools"; version="1.0"; sha256="0z7pslkkinn7flc4xwjg0bsfswf8ad4jv9rmglaj3fmjcx9b6wgj"; depends=[igraph]; }; OxyBS = derive2 { name="OxyBS"; version="1.5"; sha256="11l3gm0jvw993jb13f6kpv77m6z0d1jswscma2v28qzkw053r3dc"; depends=[]; }; P2C2M = derive2 { name="P2C2M"; version="0.7.6"; sha256="07ycl22v03b2xdaw4v0l6layqhab431ma38qywzm96hkl3ywvl49"; depends=[ape ggplot2 rPython stringr]; }; - PAC = derive2 { name="PAC"; version="1.0.10"; sha256="0cr34vjd6dr5jkbv1hhd7ln35ih8h62fmz2q8h2plbxaww88zcjf"; depends=[dplyr ggplot2 ggrepel igraph infotheo parmigene Rcpp Rtsne]; }; + PAC = derive2 { name="PAC"; version="1.1.0"; sha256="03xwrnb540487xmai34mgjvwi67szp03vmczv0aq410m6g08p5m9"; depends=[dplyr ggplot2 ggrepel igraph infotheo parmigene Rcpp Rtsne]; }; PACBO = derive2 { name="PACBO"; version="0.1.0"; sha256="1v3j5bgvf0wh8s4d2yyz0fkc3acdwjlicwnbh1r241b1742x79cb"; depends=[mnormt]; }; - PAFit = derive2 { name="PAFit"; version="1.0.0.4"; sha256="178hxn376q911kc6nsbkbgi7s26nhw5clzv7iiq6c7ns6dg7npr7"; depends=[igraph knitr magicaxis mapproj MASS network networkDynamic plyr RColorBrewer Rcpp VGAM]; }; + PAFit = derive2 { name="PAFit"; version="1.0.0.7"; sha256="0yr5d7286c6k885lrh5445q5vwsl1nkgag2zwixyavk606nr5ldm"; depends=[igraph knitr magicaxis mapproj MASS network networkDynamic plyr RColorBrewer Rcpp VGAM]; }; PAGI = derive2 { name="PAGI"; version="1.0"; sha256="01j1dz5ihqslpwp9yidmhw86l112l7rfkswmf03vss872mpvyp3f"; depends=[igraph]; }; PAGWAS = derive2 { name="PAGWAS"; version="2.0"; sha256="0bz47ivd32kx1amgqllqbxyyvj773q7wasgk924hmibabiixa8nx"; depends=[foreach lars mnormt]; }; PANDA = derive2 { name="PANDA"; version="0.9.9"; sha256="1sf3c49v4mb3mz2imqlqdbh1iab7bc2pxpi8bmgj2jld133555ip"; depends=[cluster GO_db]; }; @@ -2461,6 +2574,7 @@ in with self; { PBIBD = derive2 { name="PBIBD"; version="1.3"; sha256="0zh73bsiwmsqw1vhs2dazndsf0894kfv3vfv88wr4fnh7njysz6r"; depends=[]; }; PBImisc = derive2 { name="PBImisc"; version="1.0"; sha256="18gjp66q6l0w6vsgm6d5sjgpa906z1gyyp6yf58lq5vyg1bnfmcl"; depends=[lme4 Matrix]; }; PBNPA = derive2 { name="PBNPA"; version="0.0.3"; sha256="1wmgcmspilfv6pjy7696j2xmq8m41p27plnr1qr0fnzyz66pf37m"; depends=[metaRNASeq]; }; + PBRF = derive2 { name="PBRF"; version="1.0.0"; sha256="1ibwywgbxnxcb3z2kl2bgh7fz512nhgy2zcdym67asp76c6rkqg6"; depends=[]; }; PBSadmb = derive2 { name="PBSadmb"; version="0.68.104"; sha256="01akimdsp0bkvz3a5d75yyy3ph0mff85n8qsnr59fla5b5cm4qlj"; depends=[PBSmodelling]; }; PBSddesolve = derive2 { name="PBSddesolve"; version="1.12.2"; sha256="12pl95mcak88524s8zvk9dzib2g40fwaz6iz7igx9wg6vib9d1sj"; depends=[]; }; PBSmapping = derive2 { name="PBSmapping"; version="2.70.5"; sha256="15h28lb0zriaf4020l3a069plrklbvbg5x231r5fqflshj6v8a9f"; depends=[]; }; @@ -2477,27 +2591,30 @@ in with self; { PCIT = derive2 { name="PCIT"; version="1.5-3"; sha256="0gi28i2qd09pkaja4w7abcl7sz43jnk98897vc2905fnk9nks65j"; depends=[]; }; PCMRS = derive2 { name="PCMRS"; version="0.1-1"; sha256="10n4am4qm23aaghf8awv2llcq7392s62yr6mf5h8nf18hfz29wrn"; depends=[cubature ltm mvtnorm Rcpp RcppArmadillo statmod]; }; PCPS = derive2 { name="PCPS"; version="1.0.6"; sha256="0mihkivlpycqbzc3z8clsmiqg3c6hqnapk29h794lf99had03hp8"; depends=[ape phylobase picante RcppArmadillo SYNCSA vegan]; }; - PCRedux = derive2 { name="PCRedux"; version="0.2.6-1"; sha256="0pirra4fx2s4ks34ng7fc2vjcmzym3ffpld901glf8hppycsgf6c"; depends=[bcp caret changepoint chipPCR ecp fda_usc FFTrees magrittr MBmca pbapply plotly pracma qpcR randomForest robustbase testthat visdat zoo]; }; + PCRedux = derive2 { name="PCRedux"; version="0.2.6-4"; sha256="0nya5fx06mic7knfkzddny9lxqwk039kz0d3mf32rixwlbhrdlr5"; depends=[bcp caret changepoint chipPCR ecp fda_usc FFTrees magrittr MBmca pbapply plotly pracma qpcR randomForest robustbase testthat visdat zoo]; }; PCS = derive2 { name="PCS"; version="1.2"; sha256="0488h6s1yz6fwiqf88z2vgckn6i0kwls8cazmpw3wspnaqvl2n4s"; depends=[multtest statmod]; }; PCSinR = derive2 { name="PCSinR"; version="0.1.0"; sha256="1z8yjryw3c43vc6fxcwiindmyq6r63pc1zr3aybwmys6mv697bb4"; depends=[]; }; PCovR = derive2 { name="PCovR"; version="2.7"; sha256="00920h0qlw81vwh46inmvm4mdv0dfd8xvqvrj7l038hhmjb7qsjz"; depends=[GPArotation MASS Matrix ThreeWay]; }; + PDFEstimator = derive2 { name="PDFEstimator"; version="0.1-0"; sha256="1apw4q8x6x2hv0s5b57s667xv1k51lgqlb61xvvkfgzawvwc6x4p"; depends=[]; }; PDM = derive2 { name="PDM"; version="0.1"; sha256="1pbdy13ji9c6krgh2r1qgrzmf4hdmrdzylsr71n3hh5jq4n9xg8x"; depends=[jpeg]; }; PDN = derive2 { name="PDN"; version="0.1.0"; sha256="082ydvwcjc2rs7hlakrkgbbm9c419m408a14a9dgfdwm16yif3jd"; depends=[ggplot2 glmnet network survival]; }; PDQutils = derive2 { name="PDQutils"; version="0.1.6"; sha256="0mmfi0ifwbkjm0274sddpwkj27cvdkwngnka8vdmfm4b2nn7vgsp"; depends=[moments orthopolynom]; }; PDSCE = derive2 { name="PDSCE"; version="1.2"; sha256="17lc6d8ly6jbvjijpzg45dvqrzrh5s1sp415nycazgpbg9ypwr2h"; depends=[]; }; PEGroupTesting = derive2 { name="PEGroupTesting"; version="1.0"; sha256="1z863ard0cc2g8ibxnmxhiqhvs53r6b8gpnavnfchm9432ifcbwi"; depends=[]; }; PEIP = derive2 { name="PEIP"; version="2.2-1"; sha256="0bzynmd7azs33994dlsabxp29lncs1v2njp6iy5l62rwrnxj9y0a"; depends=[bvls fields geigen Matrix pracma RSEIS]; }; + PELVIS = derive2 { name="PELVIS"; version="1.0.4"; sha256="0gw4bxck9fvkpbqls3rj0lwjcnw7i2x3f5whiglhd712j2m63ayq"; depends=[MASS shiny]; }; PEMM = derive2 { name="PEMM"; version="1.0"; sha256="18dd9hsbdrnhrrff7gpdqrw2jv44j8lg0v3lkcdpbd4pppcaq84h"; depends=[]; }; PET = derive2 { name="PET"; version="0.5.1"; sha256="1gdq7ai8hgl9h53b72j7sfk09l7yr2b84pdy9bl1z3x8zxbsp8br"; depends=[adimpro]; }; PGEE = derive2 { name="PGEE"; version="1.5"; sha256="1qcxbqnbpplnfjy83nm9fj9y4abzgbxnsggzx7ix3vb9qs18cdwh"; depends=[MASS mvtnorm]; }; PGM2 = derive2 { name="PGM2"; version="1.0-1"; sha256="03282pcq7gw47awc2mxjsbz6w3zpqjhqd7fzg8la4p00cd0vvmr4"; depends=[]; }; PGRdup = derive2 { name="PGRdup"; version="0.2.3.3"; sha256="1s0v44922zpxl3w9kzn9xzvs5jldg35gjrnlf89f89i3rs59gg98"; depends=[data_table ggplot2 gridExtra igraph stringdist stringi]; }; PHENIX = derive2 { name="PHENIX"; version="1.3.1"; sha256="1gd9ycrwawi81al4f5v559km1112giwqnwvvk8ynj4kdb5bqpyq4"; depends=[ppcor SuppDists]; }; + PHEindicatormethods = derive2 { name="PHEindicatormethods"; version="1.0.8"; sha256="0ihsll6lkmg152z0r4gcckkz4f8j2vhrdiy6c7j6s4dk84s0nfcp"; depends=[dplyr rlang]; }; PHYLOGR = derive2 { name="PHYLOGR"; version="1.0.10"; sha256="17q760k5519alr2skvpnghz3c9jgw07lh5fpw4xf6hjk3qlqq82c"; depends=[]; }; - PHeval = derive2 { name="PHeval"; version="0.5.3"; sha256="1zq4ks6w5vrhy1f170fv16zgrgi1lfxmkpfkg75sjin7asw4i7a9"; depends=[survival]; }; + PHeval = derive2 { name="PHeval"; version="0.5.4"; sha256="06fy5dm4mnp29f01163rw1d1hyl7rlcp4pfw18s87ckpr931qyma"; depends=[survival]; }; PIGE = derive2 { name="PIGE"; version="1.1"; sha256="0pc24rvvxzpgrsx7xsj98n5vd462hjggakzwp36qdkib69yyr4bn"; depends=[ARTP snowfall survival xtable]; }; PIGShift = derive2 { name="PIGShift"; version="1.0.1"; sha256="115dnsh4b1rxx1d2kc8x3vl5366h5f0i6gg8l1w3v0f8309qigis"; depends=[ape mvtnorm]; }; - PINSPlus = derive2 { name="PINSPlus"; version="1.0.1"; sha256="02yxv1x06p6vr50g4amj4wwjlk04wadic74d1wpkxxg69zpv35lz"; depends=[cluster doParallel entropy foreach pbmcapply]; }; + PINSPlus = derive2 { name="PINSPlus"; version="1.0.2"; sha256="0awwrrrs6vfdprlc91116qa1jsqwizf7xwhwygsi2wqx9qhsxk96"; depends=[cluster doParallel entropy foreach pbmcapply]; }; PIPS = derive2 { name="PIPS"; version="1.0.1"; sha256="1c5v3s6xys9p1q32k6mpsffhi9gwsq951rh12hs76dmak862yspc"; depends=[]; }; PK = derive2 { name="PK"; version="1.3-4"; sha256="1zkjq64p34gzbsbmbdqphssnplzz65wpl486qf4yhawnb4wnkj1v"; depends=[]; }; PKI = derive2 { name="PKI"; version="0.1-5.1"; sha256="1xs3jxbczhkxnp7cyw2yh1jcwha92y9pdsbka1ligbla70bnvxyj"; depends=[base64enc]; }; @@ -2514,40 +2631,42 @@ in with self; { PLordprob = derive2 { name="PLordprob"; version="1.1"; sha256="1g23h3121g9csr85falm6vgzbva42wz3skhfr2rxmvlc3ca4afyp"; depends=[mnormt]; }; PMA = derive2 { name="PMA"; version="1.0.11"; sha256="1v8h66l602zd74mw73ygsy667nqg8p0k0wqhbsjl1imafl207s5d"; depends=[impute]; }; PMCMR = derive2 { name="PMCMR"; version="4.3"; sha256="09bvdj2h1086r2cgy3myrhlylplxxlliv8nwx09c8kb1vn02i2ij"; depends=[]; }; - PMCMRplus = derive2 { name="PMCMRplus"; version="1.2.0"; sha256="13gn16k6gg7fv9rjx5bf6q3zfx3499s52m5k59n053nr4i5d8215"; depends=[BWStest gmp kSamples MASS multcompView mvtnorm Rmpfr SuppDists]; }; - PMmisc = derive2 { name="PMmisc"; version="0.1.0"; sha256="12nw64x88cb1amqgdpcdmkiwcg3vs3kdlxlz0kw7frwgaw3l0l06"; depends=[robust]; }; - PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.4.1.1"; sha256="038xylgq3mp1nl5rf11swprv08khvzfw0jg5bmd0yvqmygr082jq"; depends=[dplyr magrittr RCurl readr readxl survey timeDate]; }; + PMCMRplus = derive2 { name="PMCMRplus"; version="1.4.0"; sha256="1x3x2fhbihjfipkwdykqfb1i70dgj1wy785wb5w98ddwzfknkjrq"; depends=[BWStest gmp kSamples MASS multcompView mvtnorm Rmpfr SuppDists]; }; + PMmisc = derive2 { name="PMmisc"; version="0.1.1"; sha256="1wyafrq9j212bbmpp6lnspxib6ca9860vp3xm9ndn8b374hv7s6r"; depends=[robust]; }; + PMwR = derive2 { name="PMwR"; version="0.10-1"; sha256="0z32cfa46mhmwnvlqpw6md9dyyy2hn5mwlrf2v4lx1b1gxqskjpd"; depends=[crayon datetimeutils fastmatch NMOF orgutils textutils zoo]; }; + PNADcIBGE = derive2 { name="PNADcIBGE"; version="0.4.3"; sha256="1mckjb6q7ffvzsifjwc411p9r1vykvczk6v7lcsmpzliifgc0ys4"; depends=[dplyr magrittr RCurl readr readxl survey timeDate]; }; + POCRE = derive2 { name="POCRE"; version="0.5.0"; sha256="0aph1lmb0xkzm4l4ah2wrx13d138igf4k4w9wb9lca4vv6m7xzqf"; depends=[EbayesThresh ggplot2 pracma]; }; POET = derive2 { name="POET"; version="2.0"; sha256="0w3jhj45sxisyrpcsazbrbcsz7rmraw71jjm0zixbcgc4klb98ar"; depends=[]; }; POMaSPU = derive2 { name="POMaSPU"; version="1.0.0"; sha256="0jz3jgzdykv0xvfw3ix0hbs32as6dp7p5v8bj5nddknx10d0siya"; depends=[MASS matrixStats Rcpp RcppArmadillo]; }; POPdemog = derive2 { name="POPdemog"; version="1.0.3"; sha256="0j83c853ligmw8ag4pb0vj46sfn2w2ynh4wvgkabzs688hxxni8r"; depends=[]; }; POT = derive2 { name="POT"; version="1.1-6"; sha256="08av53rnishk3mhwrb6ydbgc3n9nwi87jlx5vmag3vpiidhn1laj"; depends=[]; }; PP = derive2 { name="PP"; version="0.6.1"; sha256="10innn1nhc4zqimd0gww7k3k30jkfkkj89zkddcjqa2sqq5gs3xr"; depends=[Rcpp]; }; PP3 = derive2 { name="PP3"; version="1.2"; sha256="1g36al9w1rxyhfzbvpw9siqq57h2xl0zr94wysz8i0jzqkkqkrvf"; depends=[]; }; - PPCI = derive2 { name="PPCI"; version="0.1.2"; sha256="1k6kbln0h1wkzg594k1db6r3nk5dqwhg8gm1hgval05dsdhp8j8b"; depends=[rARPACK]; }; + PPCI = derive2 { name="PPCI"; version="0.1.4"; sha256="18q9jjmmmmghwyzpj42k7xa55anvbg1jnqs2y6c5jzlb2cw3ga4h"; depends=[rARPACK]; }; PPQplan = derive2 { name="PPQplan"; version="0.1.0"; sha256="06v4agq8bd3ssbfnl1jyfzy5xi4jwj6wqfmj9qalrv9kllh839mv"; depends=[ggplot2 plotly tolerance]; }; PPforest = derive2 { name="PPforest"; version="0.1.1"; sha256="0iplbw5b2vhqbp6gc123ykzmilwa80akljkv3jzfmi90ckm4k08m"; depends=[doParallel dplyr magrittr plyr Rcpp RcppArmadillo tidyr]; }; PPtree = derive2 { name="PPtree"; version="2.3.0"; sha256="002qjdx52r2h90wzrf2r3kz8fv3nwx08qbp909whn6r4pbdl532v"; depends=[MASS penalizedLDA]; }; PPtreeViz = derive2 { name="PPtreeViz"; version="2.0.3"; sha256="1x5rcls49jz19y3h98n2k4kypm8mv8p586clhdj62bvp2nl8wg3x"; depends=[ggplot2 gridExtra partykit Rcpp RcppArmadillo]; }; - PQLseq = derive2 { name="PQLseq"; version="1.0"; sha256="1r4zxwb3rw7k9jixv1wqkgdq5zjlwf85xrc0np8j96k1gdwals72"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo]; }; + PQLseq = derive2 { name="PQLseq"; version="1.1"; sha256="1h8baf0apxvimarr2qwlh6pdzv88ib1dzw927swsyimjg44wjbfc"; depends=[doParallel foreach Matrix Rcpp RcppArmadillo]; }; PRIMME = derive2 { name="PRIMME"; version="2.2-0"; sha256="1iwwh871v87fz6j6q9nvfiq8x8nz2v87n52l80a15d5rvvxv2rbi"; depends=[Matrix Rcpp]; }; - PRIMsrc = derive2 { name="PRIMsrc"; version="0.7.5"; sha256="12wfb4p8ra1b8xwq42350cxl2fy9gsrp5m7inyxnh31vplgripy9"; depends=[glmnet Hmisc quantreg superpc survival]; }; + PRIMsrc = derive2 { name="PRIMsrc"; version="0.8.2"; sha256="04g1saf511xs26m1iv9xfsmfs15fdfaxh5qlbay2mcb198270pd8"; depends=[glmnet Hmisc quantreg superpc survival]; }; PRISM_forecast = derive2 { name="PRISM.forecast"; version="0.1.6"; sha256="0w0fjbaafq90ac35h70z8g95q1i812v0ivkif4lx8l3q7rhjrvb5"; depends=[glmnet xts zoo]; }; PRISMA = derive2 { name="PRISMA"; version="0.2-7"; sha256="0sk2d07m8rhipa0kdbaf8ngryda6f1ihp5akpnyw2llajf0x8as5"; depends=[ggplot2 gplots Matrix]; }; - PRISMAstatement = derive2 { name="PRISMAstatement"; version="1.0.1"; sha256="1qk9cljk52m8rcasck8cl7gwzhcsx0p58jn31izy2j027w0rns7j"; depends=[DiagrammeR]; }; + PRISMAstatement = derive2 { name="PRISMAstatement"; version="1.0.4"; sha256="0rsffbmaaqa6zkgh7bg1l91xfk8ri7b1w6ghid44xvj3k22y0kj6"; depends=[DiagrammeR]; }; PROTOLIDAR = derive2 { name="PROTOLIDAR"; version="0.1"; sha256="0bz3071b0wlcvh40vl3dyiiixk5avsj6kjjnvlvx264i5g08rij4"; depends=[]; }; PROreg = derive2 { name="PROreg"; version="1.0"; sha256="0c2vgzbdi29rlrnrb971dqrl7rlb9y3rw8nj5rjgwsjqxv607ssj"; depends=[car fmsb Matrix matrixcalc numDeriv RColorBrewer rootSolve]; }; PROscorer = derive2 { name="PROscorer"; version="0.0.1"; sha256="0mgj0mi0vzdk0agimsx4k9i4bss0j5lqiayzhldr1hrqrx2a4f3d"; depends=[PROscorerTools]; }; PROscorerTools = derive2 { name="PROscorerTools"; version="0.0.1"; sha256="1vliffkfqdn5l96bncfgayv19i20kmawlxi8q853wamj6npdpv5r"; depends=[]; }; PRROC = derive2 { name="PRROC"; version="1.3.1"; sha256="1m28h8pcd78049lz2qixhkcr9h5b3jik3maqzfbvq9y58z71i4a7"; depends=[]; }; - PReMiuM = derive2 { name="PReMiuM"; version="3.2.0"; sha256="0aib10kalc8y1vdkbd8ipdkg9wyb984pwf979fm8d6jjbdhp0sa7"; depends=[ald BH cluster data_table gamlss_dist ggplot2 plotrix Rcpp RcppEigen]; }; + PReMiuM = derive2 { name="PReMiuM"; version="3.2.1"; sha256="0cn08w7kw0j0z8nqv380m7xs35f4mlhzx0jyzyqk811v9jzk0jii"; depends=[ald BH cluster data_table gamlss_dist ggplot2 plotrix Rcpp RcppEigen rgdal spdep]; }; PResiduals = derive2 { name="PResiduals"; version="0.2-5"; sha256="05jk543lv8isbxv24cbzqh80l6xs05lx2k9xzz7s0121vb2yd3v4"; depends=[Formula MASS rms SparseM]; }; PSAgraphics = derive2 { name="PSAgraphics"; version="2.1.1"; sha256="05c0k94dxddyrhsnhnd4jcv6fxbbv9vdkss2hvlf3m3xc6jbwvh9"; depends=[rpart]; }; - PSCBS = derive2 { name="PSCBS"; version="0.63.0"; sha256="0pgha1rvb9nfxkr8fxc17zgws781qwmrl01rss7bd0sf2n2lw2k2"; depends=[DNAcopy future listenv matrixStats R_cache R_methodsS3 R_oo R_utils]; }; + PSCBS = derive2 { name="PSCBS"; version="0.64.0"; sha256="02970zk7gkwi1d6mp82z1mbg8pjxf1pdwwv8j9wiqyfdily935i1"; depends=[aroma_light DNAcopy future listenv matrixStats R_cache R_methodsS3 R_oo R_utils]; }; PSF = derive2 { name="PSF"; version="0.4"; sha256="1hjry8vjqr6zk2i2ppf3fcpsr4v4jm1705qv6i1iz2agl6g2rcnp"; depends=[cluster data_table forecast knitr]; }; PSIMEX = derive2 { name="PSIMEX"; version="1.1"; sha256="0cndzasvg4y49incyd9nfz8y3z88ywbc7xk0zzjir665pv2xn23b"; depends=[knitr MCMCglmm pedigree plotrix]; }; PSLM2015 = derive2 { name="PSLM2015"; version="0.2.0"; sha256="1f8kzlqil2ac8a9fbj9fhdni2narh2yaaz044mlx7gsv2ns3ai19"; depends=[dplyr ggplot2 magrittr]; }; PSM = derive2 { name="PSM"; version="0.8-12"; sha256="0h83b7bhslgnrq4442464i9iil6gjhw3pwxvgz5313pfk2km30vg"; depends=[deSolve MASS numDeriv ucminf]; }; - PSPManalysis = derive2 { name="PSPManalysis"; version="0.2.0"; sha256="0vya2zlsmgf6zmkk9k9aaaqkx7qprknl0wazqlqd7zdp8z0zj39j"; depends=[devtools]; }; + PSPManalysis = derive2 { name="PSPManalysis"; version="0.2.1"; sha256="1vc13klv1iwyxb4srv4hi88v62hxbm244fg1lj8k5z11kmyii80n"; depends=[pkgbuild]; }; PST = derive2 { name="PST"; version="0.94"; sha256="0f28zrnlficbi9iil6wbh51k9mghpkz63hw05lpmlpx1yl5nd0a6"; depends=[RColorBrewer TraMineR]; }; PSTR = derive2 { name="PSTR"; version="1.2.1"; sha256="0vydm3s7m6fkwfnrfs29hwq7z5zfhrxx1ryvr3wrw1481ir29nc2"; depends=[ggplot2 magrittr plotly snowfall tibble]; }; PSW = derive2 { name="PSW"; version="1.1-3"; sha256="0ahm7rp795d7j88n15b3q0gl573p3g0krc7jd1zv87g4bsdc9b5x"; depends=[gtools Hmisc]; }; @@ -2558,11 +2677,11 @@ in with self; { PVAClone = derive2 { name="PVAClone"; version="0.1-6"; sha256="0fj5p3z2cwnyshrr4rq88wpij2xax5p4aq0x4p342kadx9d6x2ga"; depends=[coda dclone dcmle]; }; PVR = derive2 { name="PVR"; version="0.3"; sha256="0pcnazkiwmicr3k6k70r8skqk0pd46fcqhhxghawxjs4slgnygkj"; depends=[ape MASS splancs]; }; PWD = derive2 { name="PWD"; version="1.0"; sha256="0ksr3biaqd4p5a4lv28i4cwk1fn9822ndq2161mgvc1c344p06fj"; depends=[Rcpp RcppArmadillo]; }; - PWEALL = derive2 { name="PWEALL"; version="1.2.1"; sha256="08a7ih9yyp0dqw89n1qhwbxhgiks91c3wjbaz08b6ck6cv6gzy6k"; depends=[survival]; }; - PWFSLSmoke = derive2 { name="PWFSLSmoke"; version="1.0.20"; sha256="0g15ib0zks6q7swpd9s5zyl3sp83r54959ckvc88wn19bmn8dj9l"; depends=[cluster dplyr dygraphs futile_logger ggmap httr jsonlite leaflet lubridate magrittr mapproj maps maptools MazamaSpatialUtils openair png raster RColorBrewer readr reshape2 rgdal RgoogleMaps sp stringr xts zoo]; }; + PWEALL = derive2 { name="PWEALL"; version="1.3.0"; sha256="0nb0v6wvj9ay90qcbrr9drg2g84fb7a9m78pzb69wp8789i8ixhk"; depends=[survival]; }; + PWFSLSmoke = derive2 { name="PWFSLSmoke"; version="1.1.3"; sha256="0wybb5ygcvz5w2sl26rwm7hg6681lzcyr5v1nl7lb72z565f1wqw"; depends=[cluster dplyr dygraphs futile_logger ggmap httr jsonlite leaflet lubridate magrittr mapproj maps maptools MazamaSpatialUtils openair png raster RColorBrewer readr reshape2 rgdal RgoogleMaps rlang sp stringr tibble tidyr xts]; }; PabonLasso = derive2 { name="PabonLasso"; version="1.0"; sha256="158xg9i13nqy1bnpch8r6a7yas01hsdidmcypgccmyh7d7l52mr1"; depends=[]; }; Pade = derive2 { name="Pade"; version="0.1-4"; sha256="1kx5qpxd3x43bmyhk8g2af44hz3prhnrzrm571kfjmak63kym741"; depends=[]; }; - PairViz = derive2 { name="PairViz"; version="1.2.1"; sha256="0mjp5p6n5azbhrm2hvb9xyqjfhd49pw9ia8k70749yc96ws1qqc7"; depends=[graph gtools TSP]; }; + PairViz = derive2 { name="PairViz"; version="1.3.2"; sha256="01nzf7as848i3vpwgdm450x3f5lapfh2vgd59sy6qr80c19nfjl9"; depends=[graph gtools TSP]; }; PairedData = derive2 { name="PairedData"; version="1.1.1"; sha256="07y5fd4fkwfp0lbacf41ya8cn7x4n1haxl0cln9iibjffc1mbr5q"; depends=[ggplot2 gld lattice MASS mvtnorm]; }; PairwiseD = derive2 { name="PairwiseD"; version="0.9.62"; sha256="19qjms99gf7s39nwwgj56n8426d0gw80dipz165sk3km4zb2mcwv"; depends=[openxlsx xlsx]; }; PakPC2017 = derive2 { name="PakPC2017"; version="1.0.0"; sha256="196jvhv7pv4pvnnz9izk6icxv3aml26mif0w6g4907izyszf8cal"; depends=[dplyr magrittr]; }; @@ -2575,7 +2694,7 @@ in with self; { Paneldata = derive2 { name="Paneldata"; version="1.0"; sha256="00hk340x5d4mnpl3k0hy1nypgj55as2j7y2pgzfk3fpn3zls5zib"; depends=[]; }; ParDNAcopy = derive2 { name="ParDNAcopy"; version="2.0"; sha256="017xwznhfibi8kp0ifww02c0qcq0vxs06rjww4kcp2bvdmld8kc4"; depends=[DNAcopy]; }; ParallelForest = derive2 { name="ParallelForest"; version="1.1.0"; sha256="1xa9lfgrvzv7bvv1aaabcfk4372p8x5gxgj463h5ggf9x177lj5j"; depends=[]; }; - ParallelLogger = derive2 { name="ParallelLogger"; version="1.0.0"; sha256="16mwfylpk7r6cy87vb1d1h8mkwn32cmygpqvy5kk538lj9b8jcdl"; depends=[jsonlite snow XML]; }; + ParallelLogger = derive2 { name="ParallelLogger"; version="1.0.1"; sha256="01wb7rqlyp07ahcr4gs0jh92z56v9dsgkbp18y2xdnl7z533fjbh"; depends=[jsonlite snow XML]; }; ParallelPC = derive2 { name="ParallelPC"; version="1.2"; sha256="07y7xb16865khxkvwsk1yglzyy7ja4aj2wpkipaz48i77c3x8bi2"; depends=[]; }; ParallelTree = derive2 { name="ParallelTree"; version="0.1.2"; sha256="0x99x1iycx8ik8cih972awnxifvmhbrmjrf2csmnn9fw4rsqn0p5"; depends=[ggplot2]; }; ParamHelpers = derive2 { name="ParamHelpers"; version="1.11"; sha256="181p2r4zh53v6hjdr8fn7m1g65rl4svql8h1zjz25y1chk0g850n"; depends=[backports BBmisc checkmate fastmatch]; }; @@ -2589,18 +2708,18 @@ in with self; { Peacock_test = derive2 { name="Peacock.test"; version="1.0"; sha256="0ypvwywipyh8lm8xkazsfjgjpvvyi2g8kid63qff11372p33m6xs"; depends=[]; }; PeakError = derive2 { name="PeakError"; version="2017.06.19"; sha256="1d4v7s478zjz42dm6ps4nnqqyyqv84dgmzn1bp1a4qwnfv9vmfg7"; depends=[]; }; PeakSegDP = derive2 { name="PeakSegDP"; version="2017.08.15"; sha256="1ndf4d4ikcyqi0k51kil2jw777z4c1m4pda3dahrjmjyz0jhrhkw"; depends=[]; }; - PeakSegJoint = derive2 { name="PeakSegJoint"; version="2017.08.11"; sha256="1xp0gxdwsy6z06kbfg5ca2qm0kwva8scxbg22km20cikwpgdi6rm"; depends=[data_table PeakError penaltyLearning]; }; + PeakSegJoint = derive2 { name="PeakSegJoint"; version="2018.10.3"; sha256="0f0dw6swhhf301j4ci3rs8cmzd39dcjlb0kqxpdh7f00gp3qn7da"; depends=[PeakError penaltyLearning]; }; PeakSegOptimal = derive2 { name="PeakSegOptimal"; version="2018.05.25"; sha256="0j39jzy4r0h787vs3klgbpcmb096ds3hzhvv5w3xs53kl0qkypj4"; depends=[penaltyLearning]; }; Peaks = derive2 { name="Peaks"; version="0.2"; sha256="0a173p5cdm1jnm7bwsvjpxh4dccy593g02c4qjwky1cgzy5rvin2"; depends=[]; }; PearsonDS = derive2 { name="PearsonDS"; version="1.1"; sha256="0rqh9ji0bah3n1c6fcg7krgqs65qla9p3xrnc4jr7va6ph104im9"; depends=[]; }; PearsonICA = derive2 { name="PearsonICA"; version="1.2-4"; sha256="0jkbqha1nb9pf72ffki47wymsdmd50smkdhvpzvanv4y2rmqfhvg"; depends=[]; }; PedCNV = derive2 { name="PedCNV"; version="0.1"; sha256="09qxcjzwdgzdkbj28rzmfv7k3q2qsiapnvx3m45a835r57h5gynp"; depends=[ggplot2 Rcpp RcppArmadillo]; }; - PeerPerformance = derive2 { name="PeerPerformance"; version="2.1.2"; sha256="07as5csvrlr3a55miadhbcvjrjag7g69wxmb8z7rpipppa8f9q7y"; depends=[lmtest sandwich snow]; }; + PeerPerformance = derive2 { name="PeerPerformance"; version="2.2.1"; sha256="1igh8svdbxkcfgi2s70cpwdcy7jb4yhxias80vck203skyiq97vx"; depends=[lmtest sandwich]; }; PenCoxFrail = derive2 { name="PenCoxFrail"; version="1.0.1"; sha256="0snjf8jxzyf30xj3wx9p6g073dqw592l1j1c6yxfg8y4kgzhzwq7"; depends=[Matrix Rcpp RcppArmadillo survival]; }; PepPrep = derive2 { name="PepPrep"; version="1.1.0"; sha256="1s2xn05xry50l9kf1mj6yd1dpc7yp6g3d00960hswvhznb0a4l84"; depends=[biomaRt stringr]; }; PepSAVIms = derive2 { name="PepSAVIms"; version="0.9.1"; sha256="0m4jrq6wcjy0k80gvrnm9f7kvi1ifx9182xfq0psyaxpj0ggvzij"; depends=[elasticnet]; }; Peptides = derive2 { name="Peptides"; version="2.4"; sha256="1i5p0z4zhis4p1czwz3cryr64lys4dp2fddnmmasgspl8fyz8p05"; depends=[Rcpp]; }; - PerFit = derive2 { name="PerFit"; version="1.4.2"; sha256="147f2fbcjb0639h0bmiikli05r3jlbp559hj9v9af3s09l1l6v8y"; depends=[fda Hmisc irtoys ltm MASS Matrix mirt]; }; + PerFit = derive2 { name="PerFit"; version="1.4.3"; sha256="0qmh78wrx3vzz41z30db3bb62n325blphjhpzdzykfx77gr8plyr"; depends=[fda Hmisc irtoys ltm MASS Matrix mirt]; }; PerMallows = derive2 { name="PerMallows"; version="1.13"; sha256="0ny2vc8f0npixaw1kp2d93xr4g46nsg8jjwvi6afv9xjvaz0i6wy"; depends=[Rcpp]; }; Perc = derive2 { name="Perc"; version="0.1.2"; sha256="0p6l4b536jjz4lmgsdrxqsh77lx4vkb6hbyd6vhbc102m5x3b1yc"; depends=[]; }; PerfMeas = derive2 { name="PerfMeas"; version="1.2.1"; sha256="1x7ancmb41zd1js24rx94plgbssyc71z2bvpic6mg34xjkwdjw93"; depends=[graph limma RBGL]; }; @@ -2611,18 +2730,20 @@ in with self; { PetfindeR = derive2 { name="PetfindeR"; version="1.1.3"; sha256="1dkiawadfsb8akssnhddd64bn6dq6r95c7j4g3mkbq6fs9106h8x"; depends=[dplyr httr jsonlite plyr]; }; PhViD = derive2 { name="PhViD"; version="1.0.8"; sha256="038pw24sb8ja8pbbmj05rww6413i2ljybb2dxwgrpffv22aqawmc"; depends=[LBE MCMCpack]; }; PharmPow = derive2 { name="PharmPow"; version="1.0"; sha256="0gabkd8p4zsig9p697lyk8m2jxb5abjk81rpzd5ih1yk1qanhsn5"; depends=[scatterplot3d]; }; - Phase123 = derive2 { name="Phase123"; version="1.5"; sha256="05yvzx0sf6dq47nr5bk1kd2icndf20z39y9fj90zqdm3ay2hi586"; depends=[Rcpp RcppArmadillo survival]; }; + Phase123 = derive2 { name="Phase123"; version="1.8"; sha256="0n3prfbsav36an13q5bkxprchqf7i8m1mv1nivkcqxngiah8z1md"; depends=[Rcpp RcppArmadillo survival]; }; PhaseType = derive2 { name="PhaseType"; version="0.1.3"; sha256="092dqyqfaxj8qpwxcjb5cayhnq597rfjz1xb93ps4nrczycqs0l6"; depends=[coda ggplot2 reshape]; }; - PhenotypeSimulator = derive2 { name="PhenotypeSimulator"; version="0.2.2"; sha256="1mr4jq44ijdiabp3simfjh9zcl9anp1w0dili6w5sq8dzgids8gj"; depends=[data_table dplyr ggplot2 mvtnorm optparse R_utils Rcpp reshape2 snpStats zoo]; }; + PhenotypeSimulator = derive2 { name="PhenotypeSimulator"; version="0.3.1"; sha256="08bchanqs5ljihzxqy77vvq4kzqwn733jkppjdk4w6g65mq211bl"; depends=[data_table dplyr ggplot2 mvtnorm optparse R_utils Rcpp reshape2 snpStats zoo]; }; Phxnlme = derive2 { name="Phxnlme"; version="1.0.0"; sha256="0h9mi8p95rp1s8xsdv38j9fpy2cy9zvjnldjmnj0n469kimp2782"; depends=[ggplot2 gridExtra lattice manipulate testthat]; }; PhyInformR = derive2 { name="PhyInformR"; version="1.0"; sha256="10d720ww909b1xmdrms554pnn0757nzppnrniar4n157mh0qw7ms"; depends=[ape doParallel foreach geiger ggplot2 gplots gridExtra hexbin iterators PBSmodelling phytools RColorBrewer]; }; + PhySortR = derive2 { name="PhySortR"; version="1.0.8"; sha256="19426xjdii74qds0wmq5sa88zys81nyqb9lvf9pfihbjgrjr770a"; depends=[ape phytools]; }; PhyloMeasures = derive2 { name="PhyloMeasures"; version="2.1"; sha256="01axs78s10y1bkx8dbs9vvnphdzik7hpibkwyib1x9mznmyg90hr"; depends=[ape]; }; - PhylogeneticEM = derive2 { name="PhylogeneticEM"; version="1.1.0"; sha256="0ji78zx0gp1nd5assrmwxdkxryfjijnn9g34w2g2qv32s1fdj6ak"; depends=[ape capushe foreach glmnet grplasso LINselect MASS Matrix plyr Rcpp RcppArmadillo robustbase]; }; + PhylogeneticEM = derive2 { name="PhylogeneticEM"; version="1.2.1"; sha256="0mrlyaj15y1dzlnn13phjq64immad08wn99sv9zdixf7ybdvwwnv"; depends=[ape capushe foreach gglasso glmnet LINselect MASS Matrix plyr Rcpp RcppArmadillo robustbase]; }; PhysActBedRest = derive2 { name="PhysActBedRest"; version="1.0"; sha256="0gmqh700cf6aiagb45iyyf85pgp3b86fx7fbv9lrsm4mda0r8h75"; depends=[chron lubridate stringr]; }; PhysicalActivity = derive2 { name="PhysicalActivity"; version="0.2-2"; sha256="14z6plgwyr46vs9m997rvlz8sdglfs9g087an8668zqkzzs2w4ln"; depends=[]; }; PieceExpIntensity = derive2 { name="PieceExpIntensity"; version="1.0.4"; sha256="023hq0gg1vi0j3yf8p5lisgs8wfp5qwyd4akxxzx7wad2985gxb3"; depends=[Rcpp RcppArmadillo]; }; Pijavski = derive2 { name="Pijavski"; version="1.0"; sha256="1027lmmk17br9zxah980j6l3k2p92065bwigw6gpy9g0g5jjl4f1"; depends=[Rcpp]; }; PivotalR = derive2 { name="PivotalR"; version="0.1.18.3"; sha256="14l7y57zmfr7h4bq01j83am2plxx320kkhbsh0x2ypif9dni4rf2"; depends=[Matrix]; }; + PkgsFromFiles = derive2 { name="PkgsFromFiles"; version="0.5"; sha256="1fbvnlw6hxg6zndyrssiw5yyp6hz3ln985by3vwp34sfwdcwjakl"; depends=[curl dplyr readr stringdist stringr XML]; }; PlackettLuce = derive2 { name="PlackettLuce"; version="0.2-3"; sha256="1w2ihclnh3x83ip4hh95bchv5j832cqy6n140q5q1dbfz6fy1bxv"; depends=[igraph MASS Matrix partykit psychotools psychotree qvcalc rARPACK sandwich]; }; Planesmuestra = derive2 { name="Planesmuestra"; version="0.1"; sha256="0v7l4hrfckcf7zmk0ihq2ij0qli7x12j17vd6752d1yjk27fgk57"; depends=[]; }; PlasmaMutationDetector = derive2 { name="PlasmaMutationDetector"; version="1.7.2"; sha256="0qra7q2pzw212qylyrfhv6zjcsldfw84b93cari0qjqnw4gyfph2"; depends=[GenomicRanges ggplot2 robustbase Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; }; @@ -2648,7 +2769,7 @@ in with self; { PolynomF = derive2 { name="PolynomF"; version="1.0-2"; sha256="0zczryvjykr7yifb5isvys2mzgi0yj92j3p3xixn2qzzq9cr0h9a"; depends=[]; }; Pomic = derive2 { name="Pomic"; version="1.0.4"; sha256="0xy5fgimbgqqac3n7akhwyvnrvd9fpvx9h8nk4spxrxc8x0km1w7"; depends=[]; }; PooledMeanGroup = derive2 { name="PooledMeanGroup"; version="1.0"; sha256="0i9s7qskjnji3mf6clsi69rnni57v8cysgr9gh3hvxjzlf1sq8y7"; depends=[]; }; - PopED = derive2 { name="PopED"; version="0.3.2"; sha256="1lvzqpij4dqbw144ya25bhlx96mwaxz932r0bl3jsx1si9ijb8xz"; depends=[codetools dplyr ggplot2 MASS mvtnorm]; }; + PopED = derive2 { name="PopED"; version="0.4.0"; sha256="1cj6nj5w4ckvnldpc7g4mxdps619zlhzsdibd9ih8i2lxh1xbrfz"; depends=[boot codetools dplyr ggplot2 magrittr MASS mvtnorm purrr stringr tibble tidyr]; }; PopGenKit = derive2 { name="PopGenKit"; version="1.0"; sha256="0l4mbm0cyppgvcw2cbimrv29aiciyj00k8wfwcj5zr8sh7fgfhs4"; depends=[]; }; PopGenReport = derive2 { name="PopGenReport"; version="3.0.0"; sha256="0z4g7ll3dk9mgawnn7k0ysgj8w55adivc4zcrr898x399g7vnfx4"; depends=[ade4 adegenet calibrate data_table dismo gap gdistance genetics GGally ggplot2 knitr lattice mmod pegas plyr R_utils raster reshape rgdal RgoogleMaps sp vegan xtable]; }; PopGenome = derive2 { name="PopGenome"; version="2.6.1"; sha256="074vfyfhlqnc38jb0shwp5a4ikvb4jflfghmg88h3a2za3nj4abs"; depends=[ff]; }; @@ -2659,26 +2780,26 @@ in with self; { PortfolioEffectHFT = derive2 { name="PortfolioEffectHFT"; version="1.8"; sha256="0y4x0d91j6g52136d921hfs5swzf85gkxafxfkf3c15dl5ns120v"; depends=[ggplot2 rJava zoo]; }; PortfolioOptim = derive2 { name="PortfolioOptim"; version="1.0.3"; sha256="1s9msqjxqxqafhncc3hi5prhzl5cj0incd5rc9fxc23l5l4n9xjx"; depends=[Rglpk]; }; PottsUtils = derive2 { name="PottsUtils"; version="0.3-3"; sha256="165k4sjh3kqkb8bzi68wx00yl77yfbgs70fcbpzmsmcw4g4hdpzn"; depends=[miscF]; }; - PoweR = derive2 { name="PoweR"; version="1.0.6"; sha256="0p2v07wp1hqmmbf7b3mh0v4n5hbbcms9xkdhjzdfxkkbafxybc24"; depends=[Rcpp RcppArmadillo]; }; + PoweR = derive2 { name="PoweR"; version="1.0.7"; sha256="040wc7hxa8y6bm1rs7ip2skdxmmwksxkyb6xzqgdjp8m7a25fppb"; depends=[Rcpp RcppArmadillo]; }; Power2Stage = derive2 { name="Power2Stage"; version="0.5-1"; sha256="155w5yp0pdq4g3638m0c54i81lfk0g0f339hzbxpkxhs8ds7g2zv"; depends=[cubature mvtnorm PowerTOST]; }; PowerNormal = derive2 { name="PowerNormal"; version="1.2.0"; sha256="1kryqcjvgwk0l4z3gqxdiz47mha3jw5583jlb9z7ml6v7cam06sm"; depends=[]; }; PowerTOST = derive2 { name="PowerTOST"; version="1.4-7"; sha256="02k6jn5dw70518g55bchax0l5gkci827lqwwyxwnn6rzs3mx4ybs"; depends=[cubature mvtnorm TeachingDemos]; }; - PowerUpR = derive2 { name="PowerUpR"; version="1.0.0"; sha256="04lc6xjwwy9wxd7pg1wm5vg0bq3194cp0r7i72da7c10b31frdh1"; depends=[]; }; - PracTools = derive2 { name="PracTools"; version="0.9"; sha256="0yra18is5pdwzw3vc5sk53g89n5rz1hpn8zlvcx541nxr43i69sd"; depends=[]; }; + PowerUpR = derive2 { name="PowerUpR"; version="1.0.1"; sha256="1m7w3851kpnf7nnajh9w427cjpyiz18gmqhqvd4gz4gdwqpl6chz"; depends=[]; }; + PracTools = derive2 { name="PracTools"; version="1.1"; sha256="19yyhri8wr7ki62zhl9bhpf0wbx9fhrfph44j4l65kx68aphl22d"; depends=[]; }; PreKnitPostHTMLRender = derive2 { name="PreKnitPostHTMLRender"; version="0.1.0"; sha256="1749cd734f4bf0n4068s2m617k6as8h9bwp44mm3la2xy3vjf5g1"; depends=[knitr rmarkdown XML]; }; PreProcess = derive2 { name="PreProcess"; version="3.1.5"; sha256="049gdrp4kwvsid2bn12f61557qgpfv8cpzrd1b4ml47jpw8w0xdk"; depends=[oompaBase]; }; PreciseSums = derive2 { name="PreciseSums"; version="0.3"; sha256="02w0pa9dd196sg6zg9w2fp4b0k6wibbw9rbvasr3aphh98kbd6ch"; depends=[]; }; PredPsych = derive2 { name="PredPsych"; version="0.3"; sha256="0bqc2vl32z9wzby7ncrab742cajy4w5kq7wv2gh2jjqdnv9nkia7"; depends=[caret e1071 ggplot2 MASS mclust party plyr randomForest rpart statmod]; }; PredictABEL = derive2 { name="PredictABEL"; version="1.2-2"; sha256="08c7j2in1wlas6nmy44s08cq86h5fizqbhsnq312dllqdzmb2h9s"; depends=[epitools Hmisc PBSmodelling ROCR]; }; + PredictionR = derive2 { name="PredictionR"; version="1.0-11"; sha256="1dljdbya93dirx715yqs4vz7hbbcwpgrsvyfgikkm2fj28nnn6k9"; depends=[fitdistrplus]; }; PredictiveRegression = derive2 { name="PredictiveRegression"; version="0.1-4"; sha256="15vkisj3q4hinc3d537s8inhj3wk62q67qhy050xmp9j563ainmd"; depends=[]; }; PresenceAbsence = derive2 { name="PresenceAbsence"; version="1.1.9"; sha256="17qn4ggkr5aqml45nkihj1j35y479ywkm1xcfkb2g8ky66jb0c0s"; depends=[]; }; - PrevMap = derive2 { name="PrevMap"; version="1.4.1"; sha256="1hmvfk5zpflwncaiy2rr0jr2gr2gk66na6ks82b6dfgk8xdc8xmk"; depends=[geoR Matrix maxLik numDeriv pdist raster splancs truncnorm]; }; + PrevMap = derive2 { name="PrevMap"; version="1.4.2"; sha256="0iblmr2qapkhk2156xgkbr19fgz902vb79ssjpsm1w62f1i5ka9r"; depends=[geoR Matrix maxLik numDeriv pdist raster splancs truncnorm]; }; PriorGen = derive2 { name="PriorGen"; version="1.1.2"; sha256="0qvdqqdy7wdwwcq95mkgfyf7xf6xlpwdfs3gq299yyv2ba57flnm"; depends=[rootSolve]; }; PrivateLR = derive2 { name="PrivateLR"; version="1.2-22"; sha256="0d142fa3wk7yadvs8jszajs6hq9m03p0j6h5r4pbw7j0d1l72hgc"; depends=[]; }; ProDenICA = derive2 { name="ProDenICA"; version="1.0"; sha256="04gnsnd0xzw3bfbssdp06bar0lk305ry2c97pmwxgiz3ay88dfsj"; depends=[gam]; }; - ProFit = derive2 { name="ProFit"; version="1.1.2"; sha256="0z8prfmjx9zs7cqd316pc5iy3mg9vldcl12d3mk8llpvynn86ja3"; depends=[celestial cubature fftw FITSio LaplacesDemon magicaxis RColorBrewer Rcpp]; }; - ProFound = derive2 { name="ProFound"; version="1.0.1"; sha256="0ym8ggzm0b8zpfsq8xjjnwa09826gssaqhrqjyq88pwbhzh0y4pl"; depends=[celestial data_table FITSio magicaxis]; }; - ProNet = derive2 { name="ProNet"; version="1.0.0"; sha256="10r0gcxv0djrw99nd6a1jrnwvqmidw10ll645gvkp8l39li0107n"; depends=[igraph linkcomm MCL Rcpp]; }; + ProFit = derive2 { name="ProFit"; version="1.2.3"; sha256="00363b2in0lnspn5krwyvzpllyg249pq1vpy1sf51js45yhzw14f"; depends=[celestial cubature FITSio LaplacesDemon magicaxis RColorBrewer]; }; + ProFound = derive2 { name="ProFound"; version="1.1.0"; sha256="1rnzzvwdkcjmcij32s9lc0i6dgc8y8lmkyf7226wdqxpcr4cz0kz"; depends=[celestial data_table FITSio magicaxis RColorBrewer]; }; ProTrackR = derive2 { name="ProTrackR"; version="0.3.5"; sha256="19ilj03w5jpc1hw5avyb780iy3rdbby3kliym0si2zv6gyi9k541"; depends=[audio lattice signal tuneR XML]; }; ProbForecastGOP = derive2 { name="ProbForecastGOP"; version="1.3.2"; sha256="0fnw3g19lx4vs8vmn4qdirvybkiy2cxkhwkn9qa3phz45iixnvx4"; depends=[fields RandomFields]; }; ProbYX = derive2 { name="ProbYX"; version="1.1-0"; sha256="0dphf6jr72l235v3yjhwi8bqmv6ac7yrbyfwhx4qjrrcdnsb7qhl"; depends=[rootSolve]; }; @@ -2688,9 +2809,9 @@ in with self; { ProgGUIinR = derive2 { name="ProgGUIinR"; version="0.0-4"; sha256="0srhk42ssx4i096sbs4jacqjsc1ffqjxjgvpplzshlqaby1h3795"; depends=[ggplot2 MASS svMisc]; }; ProjectTemplate = derive2 { name="ProjectTemplate"; version="0.8.2"; sha256="1yxfx7vi1vvwlk5wzjlkv7q591hq6a5jdv4brzb6v670fmw21kvd"; depends=[]; }; ProjectionBasedClustering = derive2 { name="ProjectionBasedClustering"; version="1.0.7"; sha256="1nammbm9hjsgb46cqvhwx45lfaaxw13d12q43fgwk411a91rblm1"; depends=[deldir GeneralizedUmatrix geometry ggplot2 Rcpp shiny shinyjs vegan]; }; - ProliferativeIndex = derive2 { name="ProliferativeIndex"; version="1.0.0"; sha256="1baf4v9c2pqqmlgxs1jf7fhwqbsw0l1g7rdiia21acxix2j3b7wj"; depends=[]; }; + ProliferativeIndex = derive2 { name="ProliferativeIndex"; version="1.0.1"; sha256="03ipsbs8pfwr8wsx7j2y9c67ic4qcady7xpa47l8dr14ff63cfk7"; depends=[]; }; PropCIs = derive2 { name="PropCIs"; version="0.3-0"; sha256="1ywzi88igzaj2wnbrqa08cy7pw886z2m0x3j7rk45rin9mgpfdfd"; depends=[]; }; - PropClust = derive2 { name="PropClust"; version="1.4-3"; sha256="0k1wn62vlrddzhknyjpizpqxzrgl38frncql3mrlwakkn0kh8l5z"; depends=[dynamicTreeCut flashClust]; }; + PropClust = derive2 { name="PropClust"; version="1.4-6"; sha256="1p15n98b6qprphgbhdqgnsxy9d9kik19h6j9f2dy6x1hkinrzsfa"; depends=[dynamicTreeCut fastcluster]; }; PropScrRand = derive2 { name="PropScrRand"; version="1.1"; sha256="0cj62dzg4zm8d1g8h7qmviiwm93cwplppbi0p674fmmf1wy84v9s"; depends=[]; }; ProteinDescriptors = derive2 { name="ProteinDescriptors"; version="0.1.0"; sha256="1ydm8aym1wwxmfh4krh84nmj1wkgb574igg1sywl58l3qlnhya0l"; depends=[]; }; Przewodnik = derive2 { name="Przewodnik"; version="0.16.12"; sha256="1aq80aqflfm1ypqa51h10mc3g0qdr651j6g1b7008k7h0ryq42gv"; depends=[PBImisc PogromcyDanych]; }; @@ -2703,9 +2824,9 @@ in with self; { Publish = derive2 { name="Publish"; version="2018.04.17"; sha256="0dbcql2mi2qsxzcgcqa58yqynfq1800fa06ikyay2dm6gdyf0apq"; depends=[data_table lava multcomp prodlim survival]; }; PurBayes = derive2 { name="PurBayes"; version="1.3"; sha256="0nbm4cyrwfbwwbjbjkylr86cshaqbvbif6dkp4fag8kbcgyyx5qh"; depends=[rjags]; }; PwrGSD = derive2 { name="PwrGSD"; version="2.3"; sha256="1iisib4bnb3fp0nwxnal13fgd0fs1vckchr4cj716k72jh6k7slm"; depends=[survival]; }; - PxWebApiData = derive2 { name="PxWebApiData"; version="0.1.0"; sha256="0rd82kmpija4kkyl283b1z61q0abasimz4z7rki3kvfr0afa44j3"; depends=[httr jsonlite rjstat]; }; - PythonInR = derive2 { name="PythonInR"; version="0.1-4"; sha256="0krr5k0y9rggzq8f74nc6pyf47g8va1lvva31vc774hbb0rmr7gf"; depends=[pack R6]; }; - QCA = derive2 { name="QCA"; version="3.2"; sha256="1bjsc24b3g7xdb1fi3f4y1297g185gasl3xsgqxibck2zjlagl11"; depends=[fastdigest shiny venn]; }; + PxWebApiData = derive2 { name="PxWebApiData"; version="0.2.0"; sha256="0mpasacnlrwb37n221j04fzms63b63nj9z8d4h21nhkhmclrsxgg"; depends=[httr jsonlite rjstat]; }; + PythonInR = derive2 { name="PythonInR"; version="0.1-6"; sha256="0m5ppiklg4rqc3czkkb6xvkiw3bv3g6c9qcvs70i7l9gxh34xghv"; depends=[pack R6]; }; + QCA = derive2 { name="QCA"; version="3.3"; sha256="1h5vjcm3rhrs2jxrfx2h81rvbzh35slhpkn0mf13hln5c1hh0s0g"; depends=[fastdigest shiny venn]; }; QCAfalsePositive = derive2 { name="QCAfalsePositive"; version="1.1.1"; sha256="03qzb6vdnbri52gfx3laz14988p2swdv9m8i5z7gpsv3f3bjrxbp"; depends=[]; }; QCApro = derive2 { name="QCApro"; version="1.1-2"; sha256="1glfb1x1h05cs07nq5glqvlil58wp3c0kaxi1l7k94y797i8r7hq"; depends=[lpSolve]; }; QCAtools = derive2 { name="QCAtools"; version="0.2.3"; sha256="1q49l2mf02hqvz2ahqjdx7i3yxniy7dn2s74xjl9l6zdq8bypfw2"; depends=[directlabels ggplot2 QCA stringr]; }; @@ -2713,6 +2834,7 @@ in with self; { QCGWAS = derive2 { name="QCGWAS"; version="1.0-8"; sha256="1wn1kddgfmqv326pihnavbgsbd2yxrlq5s2xgi6kbprssxvj8bk1"; depends=[]; }; QCSIS = derive2 { name="QCSIS"; version="0.1"; sha256="0ibh3060jxf426svdfxiryvfhr8pwk991xs653d50ip4f9290y3a"; depends=[]; }; QCSimulator = derive2 { name="QCSimulator"; version="0.0.1"; sha256="1ff7xagnzibhrwrmkqyky4ik3kx7rrlajrs1ypm210sl1d73jwvs"; depends=[ggplot2]; }; + QDComparison = derive2 { name="QDComparison"; version="1.0"; sha256="1gn9r4vylwg483diafc5qy6wx5xhrr8nrxliwc32m6b6psblkvwz"; depends=[]; }; QFASA = derive2 { name="QFASA"; version="1.0.2"; sha256="1gfclbalcfcfmb8bq7rp8kpnaqblai9y7n7n7zh4a3qmia5vrz2b"; depends=[Rsolnp]; }; QFRM = derive2 { name="QFRM"; version="1.0.1"; sha256="1k79sq9il4326q7ivwdwlzw7drjv4pwqra3fr8kyyqcpmxh9296h"; depends=[]; }; QGglmm = derive2 { name="QGglmm"; version="0.7.1"; sha256="0hgs99vfan2nsz5i98an5z65lyw3a3ddhwzl0ffvlngw7gnshzqd"; depends=[cubature]; }; @@ -2726,7 +2848,7 @@ in with self; { QRank = derive2 { name="QRank"; version="1.0"; sha256="1f924r5bf5vjfl12hk1n5m3f94g30f6vmvzq2bn8295dflyndck0"; depends=[quantreg]; }; QRegVCM = derive2 { name="QRegVCM"; version="1.2"; sha256="0fcydkf6r2qxd59ylr8vn76bkxks91v58gfzvq3rjd5mqf9vsaaq"; depends=[quantreg SparseM truncSP]; }; QSARdata = derive2 { name="QSARdata"; version="1.3"; sha256="0dhldnh0jzzb4assycc0l14s45ymvha48w04jbnr34lrwgr9krh4"; depends=[]; }; - QTL_gCIMapping = derive2 { name="QTL.gCIMapping"; version="3.0"; sha256="1yk4sl4hlapcjajwq85jwcmpli4myib9862sz7ary676giq1vp18"; depends=[data_table doParallel foreach MASS openxlsx parcor qtl Rcpp stringr]; }; + QTL_gCIMapping = derive2 { name="QTL.gCIMapping"; version="3.1"; sha256="14zdq8a352jvgzq1wp0jj2wx3hs3cr5dpryyvlhv2c0syldlw7xl"; depends=[data_table doParallel foreach MASS openxlsx parcor qtl Rcpp stringr]; }; QTL_gCIMapping_GUI = derive2 { name="QTL.gCIMapping.GUI"; version="1.0"; sha256="05v93p3s9kncyzhiqgmd79h6b61xrr2k9vpgv9hjj0pkhsyanqc1"; depends=[data_table doParallel foreach MASS openxlsx parcor qtl Rcpp shiny stringr]; }; QTLRel = derive2 { name="QTLRel"; version="1.0"; sha256="0hlnh04w45imf0f7rm9pg1whlps5zxh00qvvn81hip16bv48cw79"; depends=[gdata lattice]; }; QUIC = derive2 { name="QUIC"; version="1.1"; sha256="021bp9xbaih60qmss015ycblbv6d1dvb1z89y93zpqqnc2qhpv3c"; depends=[]; }; @@ -2734,8 +2856,9 @@ in with self; { QZ = derive2 { name="QZ"; version="0.1-6"; sha256="1vgqwv3rbnmz2sgbmbivgnxcwy5dzgk6ivqskdnqkil4f10zflmi"; depends=[Matrix]; }; Qtools = derive2 { name="Qtools"; version="1.3"; sha256="1vbjydacgczjlsf8b8id25n3k0cq74i43nsvax22k8hbvj4g0b94"; depends=[boot MASS mice quantreg]; }; QuACN = derive2 { name="QuACN"; version="1.8.0"; sha256="1597blp8gqc5djvbgpfzi8wamvy0x50wh5amxj9cy99qa0jlglxi"; depends=[combinat graph igraph RBGL]; }; + QuClu = derive2 { name="QuClu"; version="0.1.0"; sha256="0a2malh9vz5jcjgdx4d98k0c61vz3ip8ynqh5i85x8hzcby11qgj"; depends=[]; }; QualInt = derive2 { name="QualInt"; version="1.0.0"; sha256="1ms96m3nz54848gm9kdcydnk5kn2i8p1rgl2dwn7cqcqblfvsr4j"; depends=[ggplot2 survival]; }; - Quandl = derive2 { name="Quandl"; version="2.8.0"; sha256="0n1c4343ki8nia7qrq2m9zb7b05qr3yjwvk1ji7m44sa613w6y5l"; depends=[httr jsonlite xts zoo]; }; + Quandl = derive2 { name="Quandl"; version="2.9.1"; sha256="1pifih9p6bzr11vw3pgfjx4nfjp7ap3a49mvfgys994bkai5mhhr"; depends=[httr jsonlite xts zoo]; }; QuantNorm = derive2 { name="QuantNorm"; version="1.0.3"; sha256="1kc8qfa5fwdmk4nfzlkd22968zn44ggr65ysm1l31bhbgjh59ly3"; depends=[]; }; QuantPsyc = derive2 { name="QuantPsyc"; version="1.5"; sha256="1i9bh88r8zxndzjqsj14qw64gnvm5a9kvhjhzk3qsrvl3qzjgh93"; depends=[boot MASS]; }; QuantTools = derive2 { name="QuantTools"; version="0.5.7"; sha256="069rvh4yfar5dh6aj6p0q61gasvs9wr72x9pnj00lvyjlnv06p5n"; depends=[data_table fasttime R6 Rcpp RCurl readxl]; }; @@ -2744,21 +2867,19 @@ in with self; { QuantumClone = derive2 { name="QuantumClone"; version="1.0.0.6"; sha256="1520jgkzp8g7gv7ggqhvlrdnpdyhygqjgsd1my5jq30afdqj6qmp"; depends=[DEoptim doParallel foreach fpc ggplot2 gridExtra NbClust optimx]; }; QuasiSeq = derive2 { name="QuasiSeq"; version="1.0-10-2"; sha256="1mr43vys9l1n859lzlcakjrvjllybgrwl0p8mc28h7m87yjkj670"; depends=[edgeR mgcv pracma]; }; R_cache = derive2 { name="R.cache"; version="0.13.0"; sha256="1hf5cb7xvnca5zlh9245b5g62sgsaxwdhiv7x59yld37cydakm6k"; depends=[digest R_methodsS3 R_oo R_utils]; }; - R_devices = derive2 { name="R.devices"; version="2.15.1"; sha256="09gmzb87n1ybqwyp4jdpih3w3s7nqkr4hd1qhcqr57kp2pj9jp9x"; depends=[base64enc R_methodsS3 R_oo R_utils]; }; + R_devices = derive2 { name="R.devices"; version="2.16.0"; sha256="1f4jsa7b425rm1a0d00njx0pgvrvnhzf0xz2asq4yjhm4rhz0pbz"; depends=[base64enc R_methodsS3 R_oo R_utils]; }; R_filesets = derive2 { name="R.filesets"; version="2.12.1"; sha256="0grd3wk5xh7jgp10m78knj0snqyxqv7yir6wvz2wq5rabvcn9mab"; depends=[digest future_apply R_cache R_methodsS3 R_oo R_utils]; }; R_huge = derive2 { name="R.huge"; version="0.9.0"; sha256="13p558qalv60pgr24nsm6mi92ryj65rsbqa6pgdwy0snjqx12bgi"; depends=[R_methodsS3 R_oo R_utils]; }; - R_matlab = derive2 { name="R.matlab"; version="3.6.1"; sha256="013qi3iikikgib23cqg74vpp2ymsbw1zd6zny7m1km2js6gmfchh"; depends=[R_methodsS3 R_oo R_utils]; }; + R_matlab = derive2 { name="R.matlab"; version="3.6.2"; sha256="1fw6ny8xb2j088k3s9lzd15av3j6xc2bvbccyrp7yjx2f3s3i8qv"; depends=[R_methodsS3 R_oo R_utils]; }; R_methodsS3 = derive2 { name="R.methodsS3"; version="1.7.1"; sha256="11z6v2i7jl647wxi9p5z66yvfnnqv6s7fxqmz7w2gkb6j8wl1f24"; depends=[]; }; R_oo = derive2 { name="R.oo"; version="1.22.0"; sha256="0k6xwy93fpb2p7bs76lzk52br9rv5xnd9524xj8qyazv1132x1n0"; depends=[R_methodsS3]; }; - R_rsp = derive2 { name="R.rsp"; version="0.42.0"; sha256="1zcq0hzi0j7fvj2rs796a1i120wbr0387vck17rrd644awwbsbm0"; depends=[digest R_cache R_methodsS3 R_oo R_utils]; }; - R_utils = derive2 { name="R.utils"; version="2.6.0"; sha256="03j7hrs03kyj9qrjxyp5kqv4lpqqpk6xwbkzx6j15d8928yrjr2x"; depends=[R_methodsS3 R_oo]; }; + R_rsp = derive2 { name="R.rsp"; version="0.43.0"; sha256="0ax6781kfylx0acz0i3sqnpkxmrq73x29wwfic59ng7vj0ws0gyd"; depends=[digest R_cache R_methodsS3 R_oo R_utils]; }; + R_utils = derive2 { name="R.utils"; version="2.7.0"; sha256="0cxhn14a57x4gcyrwpfz1d6dw4xh0jcpqkb33hx8imnr340blh7n"; depends=[R_methodsS3 R_oo]; }; R0 = derive2 { name="R0"; version="1.2-6"; sha256="1yvcgchxlj7hkgqkw6g8pxnracxkld1grgykkcr6wbhminbylqv8"; depends=[MASS]; }; R1magic = derive2 { name="R1magic"; version="0.3.2"; sha256="1xfldr5y7pfdi6qljjvckknsv2wi9rnzwmqxkpgnyc96md2fvwjr"; depends=[]; }; R2BayesX = derive2 { name="R2BayesX"; version="1.1-1"; sha256="1ff8cscl839ykp7l34sscc8zqp516mh64igk7dfv9n02l40w8ypf"; depends=[BayesXsrc colorspace mgcv]; }; - R2Cuba = derive2 { name="R2Cuba"; version="1.1-0"; sha256="1zmlsambajzxkc9dawlqb0png8s502hwblq0vyhqgc08yf29b43w"; depends=[]; }; R2DGC = derive2 { name="R2DGC"; version="1.0.3"; sha256="0f84fmpf3m2s2p6bllvjs8rgnhwjy54adblv02dq8gakwvb4j2aw"; depends=[]; }; R2DT = derive2 { name="R2DT"; version="0.1"; sha256="0zydrdx6xdlacq6s01jwv4rv6ydmbwmiif40rilp8h76bim0kdbr"; depends=[data_table devFunc plyr]; }; - R2G2 = derive2 { name="R2G2"; version="1.0-2"; sha256="05d5vybvsi4pyr099916nk1l8sqszs9gaj2vhsx1jxxks8981na7"; depends=[]; }; R2HTML = derive2 { name="R2HTML"; version="2.3.2"; sha256="00kxny7hajs9r2kw63qk7d03ggdxx2j1g8vbrmzp806y8aczvik9"; depends=[]; }; R2MLwiN = derive2 { name="R2MLwiN"; version="0.8-5"; sha256="09p8xrxhcf6biy1mffv31p2hlr19s51f3n67az52f3xv5lyp9wm8"; depends=[coda digest doParallel foreach foreign lattice Matrix memisc rbugs texreg]; }; R2OpenBUGS = derive2 { name="R2OpenBUGS"; version="3.2-3.2"; sha256="1cxr93g0fkdv3lqdh63l2gcp7qn3q42pm1r6nzf35550k9ahkhnv"; depends=[boot coda]; }; @@ -2771,7 +2892,7 @@ in with self; { R3port = derive2 { name="R3port"; version="0.1.1"; sha256="0ww0sqjx0la03qx353h0y5wr5qpc5fir3gjy4fsxkw6jrsyx9vaz"; depends=[plyr reshape2 whisker]; }; R4CouchDB = derive2 { name="R4CouchDB"; version="0.7.5"; sha256="1wd1yqbs8m4zqvdm6x7mrcyk5b5pr4azm3r49nrilg8fnr2bk9rz"; depends=[bitops RCurl RJSONIO]; }; R4dfp = derive2 { name="R4dfp"; version="0.2-4"; sha256="02crzjphlq4hi2crh9lh8l0acmc1rgb3wr1x8sn56cwhq4xzqzcb"; depends=[]; }; - R6 = derive2 { name="R6"; version="2.2.2"; sha256="13xfdr19ca7ymisidsanm6w7hsk3qmy5l8c0mlz3nk48f7s5cxq8"; depends=[]; }; + R6 = derive2 { name="R6"; version="2.3.0"; sha256="1jgshp0x8a65rwyvk31slnfp7l153dk5826y2rxcd5lpclby3d85"; depends=[]; }; RAC = derive2 { name="RAC"; version="1.5"; sha256="0q0kk9j3blrnhv0rfmryc35lli5j4kds2vmjdpg77znagb45609k"; depends=[maps maptools matrixStats ncdf4 plotrix raster rgdal rgeos rstudioapi sp]; }; RAD = derive2 { name="RAD"; version="0.3"; sha256="0nmgsaykxavq2bskq5x0jvsxzsf4w2gqc0z80a59376li4vs9lpj"; depends=[MASS mvtnorm]; }; RADanalysis = derive2 { name="RADanalysis"; version="0.5.5"; sha256="1py07p24i1pky8wwyy8ajmkg6h2n7nbpxp1w6lrkiyl0p2kgjm20"; depends=[scales sfsmisc]; }; @@ -2780,20 +2901,21 @@ in with self; { RAMP = derive2 { name="RAMP"; version="2.0.1"; sha256="1n8h58j6v1xs6adrr4w4ha7pn1q2fh14dyg7zgpp2smv0j2b33dr"; depends=[]; }; RAMpath = derive2 { name="RAMpath"; version="0.4"; sha256="0blixfmgiq22hd356hrp4vbhfkkgh0a58143nhirjx3sav9pxc1v"; depends=[ellipse lavaan MASS]; }; RANKS = derive2 { name="RANKS"; version="1.0"; sha256="1lvaya9jlqrr9klqznw4fz5h5x0sw191ci74hpymb4gzhhxcbp27"; depends=[graph limma NetPreProc PerfMeas RBGL]; }; - RANN = derive2 { name="RANN"; version="2.5.1"; sha256="0il5i99vbcagnxvb15af5n37g04a4q1x96bz73zh3jhki9fpw9vm"; depends=[]; }; - RANN_L1 = derive2 { name="RANN.L1"; version="2.5"; sha256="0sjf92hdw9jczvq1wl5syckhvik7wv0k9vrrgw4nnnsabc25v9pf"; depends=[]; }; + RANN = derive2 { name="RANN"; version="2.6"; sha256="1r6rivh9ba4gwnzryip0aiwsbm46zma7nvd9z5y456p2dgzp9lii"; depends=[]; }; + RANN_L1 = derive2 { name="RANN.L1"; version="2.5.1"; sha256="0npkbphdk5m8lpga874yv8vld38ikn2rk8r5ysg0n4vcd1jxr1ac"; depends=[]; }; RAP = derive2 { name="RAP"; version="1.1"; sha256="18dclijs72p6gxawpg8hk7n512ah4by5jfg2jnrp8mz79ajmdgir"; depends=[]; }; RAPIDR = derive2 { name="RAPIDR"; version="0.1.1"; sha256="14cnw4jjs5anb55zlg1yj6qc9yr51rsamigq2q7h8ypj2ggnna1d"; depends=[Biostrings data_table GenomicAlignments GenomicRanges PropCIs Rsamtools]; }; RAPTOR = derive2 { name="RAPTOR"; version="1.0.0"; sha256="1i3p3qa56ghcwh69vv3gnxnw13cbd99ms654j2bqr7g9qb7nl8vj"; depends=[mgcv]; }; RATest = derive2 { name="RATest"; version="0.1.2"; sha256="0cxb82kzmywgslf6hfjl6v015s64jh483bzxnhph420mcp3ysbfk"; depends=[ggplot2 gridExtra quantreg]; }; RAdwords = derive2 { name="RAdwords"; version="0.1.17"; sha256="1w6fkg7a5dp6s80fzcgs65f0d7qp43l4yawh00ly0b750f2fnxvp"; depends=[RCurl rjson]; }; - RApiDatetime = derive2 { name="RApiDatetime"; version="0.0.3"; sha256="0g5sdq6sl7cvsj9fgqhcdxjkrfi53078r0mbzvf69cvz38y5x3sm"; depends=[]; }; + RApiDatetime = derive2 { name="RApiDatetime"; version="0.0.4"; sha256="0z08xwdn3vzwmprx5yh2xip5bqk13zrd47lwnsa2yin2phz6yry1"; depends=[]; }; RApiSerialize = derive2 { name="RApiSerialize"; version="0.1.0"; sha256="0gm2j8kh40imhncwwx1sx9kmraaxcxycvgwls53lcyy2ap344k9j"; depends=[]; }; RAppArmor = derive2 { name="RAppArmor"; version="2.0.2"; sha256="18zmqqh4rnbnaiwi60jfp4xi8fp63ydr3jk9w4ijmy6s4hkpp75g"; depends=[]; }; RArcInfo = derive2 { name="RArcInfo"; version="0.4-12"; sha256="1j1c27g2gmnxwslff4l0zivi48qxvpshmi7s9wd21cf5id0y4za4"; depends=[RColorBrewer]; }; RBMRB = derive2 { name="RBMRB"; version="2.1.2"; sha256="1m6n2kfg83mlfy22k75hy5zjf547v0rdwk9w6l04yfyrr6himbr8"; depends=[data_table ggplot2 httr plotly rjson]; }; RBPcurve = derive2 { name="RBPcurve"; version="1.2"; sha256="0zkfvnhm780vid4qqdrx9mnc6jxxrmrnq47pqvk35rm3m4l96782"; depends=[BBmisc checkmate mlr shape TeachingDemos]; }; - RBesT = derive2 { name="RBesT"; version="1.3-3"; sha256="0pink9jza2pfm1vqmzgp0pcyg9a4ak4c9igcxj692np82mv8hi0j"; depends=[assertthat bayesplot BH checkmate dplyr Formula ggplot2 lme4 mvtnorm Rcpp RcppEigen rstan StanHeaders]; }; + RBesT = derive2 { name="RBesT"; version="1.3-4"; sha256="1p74vn1651vyc9ydrp80fimj13p5bwmc56paxbh91liqsw0sd4b2"; depends=[assertthat bayesplot BH checkmate dplyr Formula ggplot2 mvtnorm Rcpp RcppEigen rstan StanHeaders]; }; + RBitmoji = derive2 { name="RBitmoji"; version="0.0.2"; sha256="1v9qj3vmqsvnccsy735nbflmd81183h2flm0f1ckd4kl08r2fr3f"; depends=[getPass httr jsonlite png RCurl]; }; RCA = derive2 { name="RCA"; version="2.0"; sha256="0pidb5czrf0dc3ywy6cwm5akgsc62pvf94kfyxibzmd1favykx1h"; depends=[gplots igraph]; }; RCEIM = derive2 { name="RCEIM"; version="0.3"; sha256="1kil5r88b6lf8vxmswz0wn0hhjxjm8jmlcl5kxjwl6fwjyy2z120"; depends=[]; }; RCMIP5 = derive2 { name="RCMIP5"; version="1.2.0"; sha256="0bwp1ln0y48g2d0bj9b47y0rlwffzv0pi6gjfzv4sg5anhswc9x7"; depends=[abind assertthat digest dplyr Matrix]; }; @@ -2810,8 +2932,8 @@ in with self; { RConics = derive2 { name="RConics"; version="1.0"; sha256="1lwr7hi1102gm8fi9k5ra24s0rjmnkccihhqn3byckqx6y8kq7ds"; depends=[]; }; RCriteo = derive2 { name="RCriteo"; version="1.0.2"; sha256="1vyhnblw9zr5h6c25lf76p9vn95k8vr0hpq1sjkccdwl9yvsyhfy"; depends=[httr plyr RCurl XML]; }; RCrypto = derive2 { name="RCrypto"; version="0.1.0"; sha256="1lw7hq5ks36fixk0g3gcy4nw21ygwc14jq840hnhyds4glywfpvm"; depends=[dplyr httr jsonlite]; }; - RCurl = derive2 { name="RCurl"; version="1.95-4.10"; sha256="02pyh6kvsfbwgccf8v77aa3ky21kps1rpgaii20wmridrgqj90vg"; depends=[bitops]; }; - RCzechia = derive2 { name="RCzechia"; version="1.2.6"; sha256="03zp8y76084l2zjzf9bbfhig7gi01a21gnjfiajzi8q851nfgl29"; depends=[httr lwgeom magrittr sf]; }; + RCurl = derive2 { name="RCurl"; version="1.95-4.11"; sha256="1gwpikvd5r0fjxp4cbn3mz80d52xmlfgx07dk06lc35qylf0jakr"; depends=[bitops]; }; + RCzechia = derive2 { name="RCzechia"; version="1.3.0"; sha256="0c002x07qgnn3vfrvyr12a2vk3dbrabi2qq9a3acnff7isk3hq1m"; depends=[httr lwgeom magrittr sf]; }; RDIDQ = derive2 { name="RDIDQ"; version="1.0"; sha256="09gincmxv20srh4h82ld1ifwncaibic9b30i56zhy0w35353pxm2"; depends=[]; }; RDML = derive2 { name="RDML"; version="0.9-9"; sha256="0amlr7mxp7175a7rd3jw7lhyvp3lnr01y81l27sl148sfb85zar6"; depends=[checkmate data_table lubridate pipeR R6 readxl rlist stringr xml2]; }; RDS = derive2 { name="RDS"; version="0.8-1"; sha256="18xn0ci35xs2myzj8rny6pp08cn8ljl3l4fdgaqp05fphgb5fh8j"; depends=[anytime ergm ggplot2 gridExtra Hmisc igraph isotone network reshape2 scales]; }; @@ -2821,13 +2943,14 @@ in with self; { RDieHarder = derive2 { name="RDieHarder"; version="0.1.4"; sha256="0p37r45fy75a0is2mycvhrz705707acdb2858yd9qx70n6sg3jph"; depends=[]; }; RDocumentation = derive2 { name="RDocumentation"; version="0.8.2"; sha256="0qdn3c5xbjyrhk56wfch50xpyyfd4f79hs0v00cqk9iwsnjlwmb5"; depends=[httr proto rjson]; }; RDota2 = derive2 { name="RDota2"; version="0.1.6"; sha256="0fjsgg4dmzw2xwrf8jxq0f2d7f78bf67bl3ms5qcjk9kskfnymag"; depends=[httr jsonlite]; }; - REAT = derive2 { name="REAT"; version="2.0.0"; sha256="0al0502h1iyd03c4hsy35nxz3nbvvfshi5jxxvxlh1x4bxvpy1vs"; depends=[]; }; + REAT = derive2 { name="REAT"; version="2.1.0"; sha256="16yrpdvy33arjcdn6zq674vhkm4m819a6i6ls1scwd8ag9fv3zxj"; depends=[]; }; REBayes = derive2 { name="REBayes"; version="1.3"; sha256="0byd7587vddffplzp8kc2aakab61pck2r25rajxfn0rsvl5yvxyx"; depends=[Matrix reliaR Rmosek]; }; RECA = derive2 { name="RECA"; version="1.6"; sha256="0bb6phd7f8rrz7754bn6sp53jrvcl6xg6lkj330945xwia1dhpxi"; depends=[]; }; REDCapR = derive2 { name="REDCapR"; version="0.9.8"; sha256="14psw0sxlyig4nf968n997djwf80hgy5ia2g0bp8rdpn8lrj01g6"; depends=[data_table dplyr httr magrittr readr tibble tidyr]; }; REEMtree = derive2 { name="REEMtree"; version="0.90.3"; sha256="01sp36p12ky8vgsz6aik80w4abs70idr9sn4627lf94r92wwwsbc"; depends=[nlme rpart]; }; REGENT = derive2 { name="REGENT"; version="1.0.6"; sha256="1f2sjqkhw3rbmwbcmx7l7imj696kblisi8y3fz77xygbcbxa6rmq"; depends=[]; }; - REIDS = derive2 { name="REIDS"; version="0.0.2"; sha256="1njyvc818rwwg109ry8nb2p05rf9yh6zsydvww2ribynlsr2rir1"; depends=[aroma_affymetrix aroma_core biomaRt data_table GenomeGraphs lmtest MCMCpack RColorBrewer]; }; + REIDS = derive2 { name="REIDS"; version="0.1.0"; sha256="10mznsba9bmv9754zg6pzrwlrgkcki7zfr995nrlsg5fjphqyqg9"; depends=[aroma_affymetrix aroma_core biomaRt data_table GenomeGraphs lmtest MCMCpack RColorBrewer]; }; + REPLesentR = derive2 { name="REPLesentR"; version="0.2.0"; sha256="0j3zlbmx5mfnp3cr9cf02f2yl8g2lji4smpzjhffx0hac2ina9y8"; depends=[dat knitr modules]; }; REPPlab = derive2 { name="REPPlab"; version="0.9.4"; sha256="1pf8zrjdzziyq2lw31p1ij7cn4j7pf659ygxv8wpfnmcmpaqbc45"; depends=[lattice LDRTools rJava]; }; REPTILE = derive2 { name="REPTILE"; version="1.0"; sha256="11swy4jrmmb0xjjxm1wyxd628fxxcqnialvijdrjwjpdbvraz4gq"; depends=[doParallel flux foreach optparse randomForest]; }; REQS = derive2 { name="REQS"; version="0.8-12"; sha256="049glqhc8h8gf425kmj92jv70917dsigpm37diby0c6hb4jrg8ka"; depends=[gtools]; }; @@ -2852,10 +2975,12 @@ in with self; { RGCCA = derive2 { name="RGCCA"; version="2.1.2"; sha256="0zcxakqnmih0243y5b6r9nmcfanzxd6q344pd5bca5pnm3y43wr0"; depends=[Deriv MASS]; }; RGENERATE = derive2 { name="RGENERATE"; version="1.3.5"; sha256="12dq04xpl06zhkzwqx3zy0bkpvb5phbdj2inxsyczf6d4dk209mb"; depends=[RMAWGEN]; }; RGENERATEPREC = derive2 { name="RGENERATEPREC"; version="1.2"; sha256="1w28yfzk3ilbz1r9fsc76cigyrnzzhsfm3a81ff8g26za7cb8vjp"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN stringr]; }; - RGF = derive2 { name="RGF"; version="1.0.3"; sha256="00s360kba9w58bzyhikh487gymryq0g62zhyr3zd2vfm4x0rl0ms"; depends=[Matrix R6 reticulate]; }; + RGF = derive2 { name="RGF"; version="1.0.5"; sha256="0dd3ziaprarvg2bmm1vci5fpqp2xfa6rk60zx2cagkqgnly152zn"; depends=[Matrix R6 reticulate]; }; RGIFT = derive2 { name="RGIFT"; version="0.1-5"; sha256="1745fs4bq0ss39fiwljspvrmnkgbbpc1fjvhvcrsmp2iizq12sgn"; depends=[]; }; + RGeckoboard = derive2 { name="RGeckoboard"; version="0.1-5"; sha256="0h7x3kdmlba9siwcnf313ajmz2jsmyhl7pndzs7qaqina3hkl46r"; depends=[httr jsonlite]; }; RGenetics = derive2 { name="RGenetics"; version="0.1"; sha256="0x5sspd67hh08qm62whlnnd838m0np29q3bfzgwp6j85lhil3jrx"; depends=[]; }; RGeode = derive2 { name="RGeode"; version="0.1.0"; sha256="1g8ha6zg4pvi8qimiihsa6rjfdcyj0q526l44jajjbqczmwg59lv"; depends=[MASS Rcpp]; }; + RGoogleAnalytics = derive2 { name="RGoogleAnalytics"; version="0.1.6"; sha256="05wbcdksx5g6y7x4r1pvc9is3afxbpdxdbmc6b4jhn46rg4228z4"; depends=[digest httr lubridate]; }; RGoogleAnalyticsPremium = derive2 { name="RGoogleAnalyticsPremium"; version="0.1.1"; sha256="0d22pdd5kvnrspikfb66ny07pgx96rvykr0zi78rwn6g1symdb4q"; depends=[httr jsonlite lubridate]; }; RGoogleFit = derive2 { name="RGoogleFit"; version="0.3.1"; sha256="0g4r5vb9zv6mqym1mh028ic9hkmlpklrhq4ks5sys7y60ps893k1"; depends=[bit64 httr jsonlite RCurl]; }; RGraphics = derive2 { name="RGraphics"; version="2.0-14"; sha256="0bv95g17pvpq3nji0akphdaznh9k85hf5z78qypxwfqr76brxd05"; depends=[ggplot2 lattice]; }; @@ -2878,18 +3003,19 @@ in with self; { RInside = derive2 { name="RInside"; version="0.2.14"; sha256="1ks9hs78s2vgdp9nfpzwifkqnh3vnaqwand51yh9r1zyjc4k9rcd"; depends=[Rcpp]; }; RItools = derive2 { name="RItools"; version="0.1-16"; sha256="0rs5gzlpsn8ci4s2pqaarzwd6y41vv6l4188p93x0vl2jcpd77vl"; depends=[abind SparseM survival svd xtable]; }; RJDBC = derive2 { name="RJDBC"; version="0.2-7.1"; sha256="1d36js3kwlghsjxfhv7rl8nvg210hxwrx8sdxrxb0inwlqsash25"; depends=[DBI rJava]; }; - RJSDMX = derive2 { name="RJSDMX"; version="1.9-3.1"; sha256="0iz4p9kl9i61sd23cqfwgwmqb48nz882mvir7p7sg5ysm0b65ijd"; depends=[rJava zoo]; }; + RJSDMX = derive2 { name="RJSDMX"; version="2.1-0"; sha256="1z1fhm6as9m35v11n5npv3mlaaal7w5c04g4yl2p26ljsmssfbsh"; depends=[rJava zoo]; }; RJSONIO = derive2 { name="RJSONIO"; version="1.3-0"; sha256="1dwgyiy19sixhy6yclqcaaxswbmpq7digyjjxhy1qv0wfsvk94qi"; depends=[]; }; RJSplot = derive2 { name="RJSplot"; version="2.5"; sha256="0p2zqbq29pfjl703wqqjzgmif7yfzz7l8rzarjf5axkdy7w7fcyl"; depends=[]; }; RJaCGH = derive2 { name="RJaCGH"; version="2.0.4"; sha256="1a8nd0w73dvxpamzi2addwr6q3rxhnnpa1girnlwbd1j1dll0bz6"; depends=[]; }; RJafroc = derive2 { name="RJafroc"; version="1.0.2"; sha256="099q1ajngj147szdnnyx2yi8samc7vbjbvygafgwr20dbvp07wzg"; depends=[bbmle binom caTools ggplot2 mvtnorm numDeriv Rcpp stringr xlsx]; }; RKEA = derive2 { name="RKEA"; version="0.0-6"; sha256="1dncplg83b4zznh1zh90wr8jv5259cy93imrry86c5kqdijmhrrp"; depends=[rJava RKEAjars tm]; }; RKEAjars = derive2 { name="RKEAjars"; version="5.0-3"; sha256="0sm7dkdprmqh319jc43ra7qbk4qq0b2kdj9zs9mjcjz58gcrkl7s"; depends=[rJava]; }; + RKEEL = derive2 { name="RKEEL"; version="1.2.3"; sha256="0w4ahialryzazla0xdfy6ci9v60sn57rmafhcpjp6vdjsy2r27r2"; depends=[arules doParallel foreach gdata Matrix pmml R6 rJava RKEELdata RKEELjars XML]; }; RKEELdata = derive2 { name="RKEELdata"; version="1.0.5"; sha256="1swzqw6j006ya48ahg6n1g8faxhqiv9v5q1zrnihpzj6868lf7y3"; depends=[]; }; RKEELjars = derive2 { name="RKEELjars"; version="1.0.18"; sha256="0gnjpqkm0bl6wpy9fhma6gfm6ngw786jv01kkbxz072hp1swrgmx"; depends=[downloader]; }; RKlout = derive2 { name="RKlout"; version="1.0"; sha256="17mx099393b1m9dl3l5xjcpzmb9n3cpjghb90m9nidccxkhacmqf"; depends=[RCurl]; }; RLRsim = derive2 { name="RLRsim"; version="3.1-3"; sha256="1r0xqay3jfg435dh9fqc6yy73wjffp658da194rx63vpfhshgz8w"; depends=[lme4 mgcv nlme Rcpp]; }; - RLT = derive2 { name="RLT"; version="3.2.1"; sha256="14im1lvsfpl1vlhc3fmmi4vq41br48mlgqqnwnj0qqxawzzs5738"; depends=[]; }; + RLT = derive2 { name="RLT"; version="3.2.2"; sha256="1a8cip975z99g8ljng4y86wv1gf1xwg0sqnxz79wj6zxpw8fk37c"; depends=[]; }; RLeafAngle = derive2 { name="RLeafAngle"; version="1.0"; sha256="1anks22hn6qpac556p99kilkhc80h572dvcyz3wj1nqffdrhgrh3"; depends=[]; }; RLogicalOps = derive2 { name="RLogicalOps"; version="0.1"; sha256="1qyn80x3x3bb5wgzyzw6pxs8a6q26yq1fkmkz7f5wywsnrj8hzfj"; depends=[rstackdeque stringr]; }; RLumModel = derive2 { name="RLumModel"; version="0.2.3"; sha256="059nqbvy13jjgzhp4n9afqkc3dbv06aml5v5ffkhpx8kcmv48xp1"; depends=[deSolve Luminescence Rcpp RcppArmadillo]; }; @@ -2898,20 +3024,18 @@ in with self; { RM2 = derive2 { name="RM2"; version="0.0"; sha256="1v57nhwg8jrpv4zi22fhrphw0p0haynq13pg9k992sb0c72dx70a"; depends=[msm]; }; RM2006 = derive2 { name="RM2006"; version="0.1.0"; sha256="1qjvdh89jql1fl6ia76g766y1igkshlv0slqmpi0y3bn40413snb"; depends=[]; }; RMAWGEN = derive2 { name="RMAWGEN"; version="1.3.3"; sha256="0spc0vszbxfpfp3kqdj0gnb90nvn50qwalq3mw8151b8h1swmf3l"; depends=[chron date vars]; }; - RMC = derive2 { name="RMC"; version="0.2"; sha256="1sc4nsjmaw2ajm8bka7r4mf73zxqhnvx23kl4v20pfpy9rhgd0h6"; depends=[]; }; - RMCriteria = derive2 { name="RMCriteria"; version="0.1.0"; sha256="19i7idpkl7ipqcib6rlmbi77n1il9v2hy6s9yyia6m9sz1smxakl"; depends=[dplyr ggnetwork ggplot2 gridExtra linprog lpSolve network pastecs Rcpp RcppEigen RcppNumerical]; }; + RMCriteria = derive2 { name="RMCriteria"; version="0.1.1"; sha256="195kamlc9qfpnv5vbimqn3m0qzac8ixy2b26xm533m51rv5k9njd"; depends=[dplyr ggnetwork ggplot2 gridExtra linprog lpSolve network pastecs Rcpp RcppEigen RcppNumerical]; }; RMKdiscrete = derive2 { name="RMKdiscrete"; version="0.1"; sha256="0b4adw46sn98qmy4nxv5l5svcjrp5532x7slfhhgsskqx408lzjf"; depends=[]; }; - RMOA = derive2 { name="RMOA"; version="1.0"; sha256="01mrl6544wv2jc8b8gk1whs865sbv4id5sywnf1hq3r7g8wgs8lp"; depends=[rJava RMOAjars]; }; - RMOAjars = derive2 { name="RMOAjars"; version="1.0"; sha256="0k3w37dwyyvfxh7a9l76cyjm27qq1clxppc5h16li2m8x68fvpjq"; depends=[rJava]; }; + RMOA = derive2 { name="RMOA"; version="1.0.1"; sha256="1ppbwqdfxzk1ayms0rqw22l0r8vkk8av39spwpq8avgl6vssw8c4"; depends=[rJava RMOAjars]; }; + RMOAjars = derive2 { name="RMOAjars"; version="1.0.1"; sha256="0qzpwsbndn8fw9560z9h9w9ff9bx6xj7mr50683q1n3dpn5z637i"; depends=[rJava]; }; RMRAINGEN = derive2 { name="RMRAINGEN"; version="1.0"; sha256="175kd803a44yblq2jw5mrn2qv4piiy249577lf684bmmajf4ird4"; depends=[blockmatrix copula Matrix RGENERATE RMAWGEN]; }; RMThreshold = derive2 { name="RMThreshold"; version="1.1"; sha256="0wkc42vcggib002ad6ch43h6avpdgl12szrrrfd2p0wl72cwn5n1"; depends=[Matrix png]; }; RMTstat = derive2 { name="RMTstat"; version="0.3"; sha256="1nn25q4kmh9kj975sxkrpa97vh5irqrlqhwsfinbck6h6ia4rsw1"; depends=[]; }; RMallow = derive2 { name="RMallow"; version="1.0"; sha256="0prd5fc98mlxnwjhscmghw62jhq9rj5jk8qf4fnaa2a718yxf9b5"; depends=[combinat]; }; RMariaDB = derive2 { name="RMariaDB"; version="1.0.6"; sha256="19pjxgz9h3bb89ra6ha6mbnzyz1sagmm82qd57y0rbrsvwn0pk2i"; depends=[BH bit64 DBI hms plogr Rcpp]; }; - RMark = derive2 { name="RMark"; version="2.2.4"; sha256="1vns8bl3fnk6hkwmm0wl2c6lgyv3vabsk07kkxrxrl1nzy11wj3a"; depends=[coda matrixcalc msm]; }; + RMark = derive2 { name="RMark"; version="2.2.5"; sha256="16nbm8fl8zdllgkx2hcjziakfrdwahxzn6d5mwigd4wcyvygkzzv"; depends=[coda matrixcalc msm]; }; RMediation = derive2 { name="RMediation"; version="1.1.4"; sha256="19idqx0hwljbcfrpqwa81k7cxbd8kv77ji8yi4n4p7517jbkzma6"; depends=[e1071 lavaan MASS]; }; - RMixpanel = derive2 { name="RMixpanel"; version="0.6-3"; sha256="025fg36jwq44y5m7msmjql3m0avc0hl0iw49wap0fvmzy5qn24qq"; depends=[base64enc jsonlite RCurl uuid]; }; - RMongo = derive2 { name="RMongo"; version="0.0.25"; sha256="1anybw64bcipwsjc880ywzj0mxkgcj6q0aszdad6zd4zlbm444pc"; depends=[rJava]; }; + RMixpanel = derive2 { name="RMixpanel"; version="0.7-1"; sha256="1xwmmfvky49n1l0w3kwcyaf2h4rhzz4k5icjwvpc90fqk8sxib6a"; depends=[base64enc jsonlite RCurl uuid]; }; RMySQL = derive2 { name="RMySQL"; version="0.10.15"; sha256="0bmc7w5fnkjaf333sgc0hskiy332m9gmfaxg0yzkjxscpizdw43n"; depends=[DBI]; }; RNAseqNet = derive2 { name="RNAseqNet"; version="0.1.2"; sha256="07wk0i8iz3cvkiqawxhm61g3nka8adw0zrrv60zx329gg49w0ycl"; depends=[ggplot2 glmnet hot_deck igraph PoiClaClu]; }; RNAsmc = derive2 { name="RNAsmc"; version="0.3.0"; sha256="15k88skwqcd0m4m502fipdl1iind4mzizqdz4h63izpqfxijl3iz"; depends=[RRNA]; }; @@ -2921,15 +3045,15 @@ in with self; { RND = derive2 { name="RND"; version="1.2"; sha256="1rl5apgw43c841z0lapi9z2jn979dvqh4x1qkqx1ad77zcq87c85"; depends=[]; }; RNGforGPD = derive2 { name="RNGforGPD"; version="1.0"; sha256="11n7fl1rrgnknn61qw6dh74amhakkjk5wyg0rms554lw9cn86x2v"; depends=[corpcor Matrix mvtnorm VGAM]; }; RNHANES = derive2 { name="RNHANES"; version="1.1.0"; sha256="045ykpgxvc22blbp47ysbk6a6x4akjd39pjr114cr23s7f48g6h4"; depends=[dplyr foreign rvest survey xml2]; }; - RNOmni = derive2 { name="RNOmni"; version="0.4.0"; sha256="1dk7ydbdhz92ixgm7carsalsdah4s3mshlkri3b69r9maxakkkjr"; depends=[abind foreach mvtnorm plyr Rcpp RcppEigen]; }; + RNOmni = derive2 { name="RNOmni"; version="0.5.0"; sha256="1vfyri5mpc67295kmqg1vxc1brg6piyljgv3k62f6k0ynvddyd9x"; depends=[abind foreach plyr Rcpp RcppEigen]; }; RNRCS = derive2 { name="RNRCS"; version="0.2.5"; sha256="19q78l8mh4701vqvr36vqc87n39s5ivzhiy5lvnxbd4dgibk1jr2"; depends=[ggplot2 magrittr rvest xml2]; }; RNaviCell = derive2 { name="RNaviCell"; version="0.2"; sha256="15k8hkagn5520fy7x672fy329s2v7l0x44s44f6v7ql9mmg4b635"; depends=[RCurl RJSONIO]; }; - RNeXML = derive2 { name="RNeXML"; version="2.1.1"; sha256="1hnw7m5sasbs7si3aivrg984fpjpya093zzk0jjigba2gq375x4p"; depends=[ape dplyr httr lazyeval plyr reshape2 stringr tidyr uuid XML xml2]; }; + RNeXML = derive2 { name="RNeXML"; version="2.1.2"; sha256="0ax5mm8fa4rh1lqnhr9jspwnb6a098yja7ycssjj1lac0z7cs3c6"; depends=[ape dplyr httr lazyeval plyr reshape2 stringr tidyr uuid XML xml2]; }; RNentropy = derive2 { name="RNentropy"; version="1.2.2"; sha256="0chvmrvpyyghilwb63y6pd1zp94i5qhpv5w19x9nw0ypk86pp2dj"; depends=[]; }; RNetCDF = derive2 { name="RNetCDF"; version="1.9-1"; sha256="0idfskxb1k8x0zzl6b0kgskdxn7zr49gw9xcj870ah9zp93iwnkx"; depends=[]; }; RNetLogo = derive2 { name="RNetLogo"; version="1.0-4"; sha256="1z7jp454k197c0zbkn64zmf25wadkiznv3w2csgiz917cbx6xcn1"; depends=[igraph rJava]; }; RNewsflow = derive2 { name="RNewsflow"; version="1.0.1"; sha256="1vxzcsiapnq8101iq4w73m9k8cq2khgcsxak71x72n295r7qpsd6"; depends=[data_table igraph Matrix plyr scales slam tm wordcloud]; }; - RNifti = derive2 { name="RNifti"; version="0.8.1"; sha256="1m1hw6mq47afa7kk36xkk3sb0yv28qwz503a7wq5c4djyp262mgh"; depends=[Rcpp]; }; + RNifti = derive2 { name="RNifti"; version="0.10.0"; sha256="07sfzps4yg5zdhbxh6i4rbjvbjvvf2d8i9jcf64ywbmi557sw1zv"; depends=[Rcpp]; }; RNiftyReg = derive2 { name="RNiftyReg"; version="2.6.1"; sha256="07ibpdh2z01jh9nmhs7lcz630fdq6lwal6w58np3axgcd91ch1mj"; depends=[ore Rcpp RcppEigen RNifti]; }; ROAuth = derive2 { name="ROAuth"; version="0.9.6"; sha256="0vhsp8qybrl94898m2znqs7hmlnlbsh8sm0q093dwdb2lzrqww4m"; depends=[digest RCurl]; }; ROC632 = derive2 { name="ROC632"; version="0.6"; sha256="0vgv4rclvb79mfj1phs2hmxhwchpc5rj43hvsj6bp7wv8cahfg5g"; depends=[penalized survival survivalROC]; }; @@ -2955,25 +3079,26 @@ in with self; { ROI_plugin_lpsolve = derive2 { name="ROI.plugin.lpsolve"; version="0.3-1"; sha256="0i1skxk88s8cgxbr2hl5z8h88aqchrfs3206dfb92libw3yi1vas"; depends=[lpSolveAPI ROI]; }; ROI_plugin_msbinlp = derive2 { name="ROI.plugin.msbinlp"; version="0.3-0"; sha256="00zvjqq2sj7iaymc0lrf5lmqfbqilwh8llmq841lvsmbps45w41k"; depends=[ROI slam]; }; ROI_plugin_neos = derive2 { name="ROI.plugin.neos"; version="0.3-0"; sha256="0hs64qbna8ggmn83g903kbxiyv5ghh2454xca0caf14x9lszv02j"; depends=[ROI xml2 xmlrpc2]; }; - ROI_plugin_nloptr = derive2 { name="ROI.plugin.nloptr"; version="0.3-0"; sha256="0niq0q08033vcm59wflilii7lciqixcpf13a93hgdaypdca8lxcw"; depends=[nloptr ROI]; }; + ROI_plugin_nloptr = derive2 { name="ROI.plugin.nloptr"; version="0.3-1"; sha256="1cy6q0cchd4rqmd2gxmg83q7cg93w6nnafjqsjxlj13773jr46f0"; depends=[nloptr ROI]; }; ROI_plugin_optimx = derive2 { name="ROI.plugin.optimx"; version="0.3-0"; sha256="0hwjgwmaclq6y5mfmykjrchpyb632qzwcvvs1nnanmrh3yhfmpg9"; depends=[optimx ROI]; }; ROI_plugin_qpoases = derive2 { name="ROI.plugin.qpoases"; version="0.3-1"; sha256="0ph6l85hrsc40wl443kkxywb2i0cjyh38g20000rnzhygl8kd7db"; depends=[Matrix Rcpp ROI slam]; }; ROI_plugin_quadprog = derive2 { name="ROI.plugin.quadprog"; version="0.2-5"; sha256="1c4fd16kgg60gfs52xc64ii4kzl8fb8qz3rpy69d08avb4q6grir"; depends=[quadprog ROI slam]; }; ROI_plugin_scs = derive2 { name="ROI.plugin.scs"; version="0.3-0"; sha256="0krlrmw85j1g35pvh4ig10djb6y6akyrfymkfk4dqg751w7mb4fm"; depends=[Matrix ROI scs slam]; }; ROI_plugin_symphony = derive2 { name="ROI.plugin.symphony"; version="0.2-5"; sha256="1kpa82g33i2fdcnkpcqdpslj14ilrl7cp0fq1jmp4vj8ddz1s9g5"; depends=[ROI Rsymphony slam]; }; ROMIplot = derive2 { name="ROMIplot"; version="1.0"; sha256="1njbsvnz7wrsv9l1p70p1ygmckaibz5i6jmvb0sfalp5jdcgl85n"; depends=[MortalitySmooth RCurl]; }; + ROP = derive2 { name="ROP"; version="1.0"; sha256="12gh83r3hp1qdmw3p5rr1wfhsh90pirx67q456gl9ai6zgd8nkq8"; depends=[ROCR]; }; ROSE = derive2 { name="ROSE"; version="0.0-3"; sha256="12b9grh3rgaa07blbnxy8nvy5gvpd45m43bfqb3m4k3d0655jpk2"; depends=[]; }; ROlogit = derive2 { name="ROlogit"; version="0.1.2"; sha256="09j9c24f7plzpnnhpmzdi4gapb7w1377ksjwk6i2xpyr4bfsrr5k"; depends=[evd survival]; }; ROpenDota = derive2 { name="ROpenDota"; version="0.1.2"; sha256="17s73yj2w5hlpy09ad83m4s2d9shg5h4zg64wvbp1ivyvpp7l308"; depends=[jsonlite RCurl]; }; ROpenFIGI = derive2 { name="ROpenFIGI"; version="0.2.8"; sha256="0fvd25vsqkgi3jv4s2lnfag5qksyzyb48d7rhfw6z8piz37n4xaj"; depends=[httr jsonlite]; }; ROpenWeatherMap = derive2 { name="ROpenWeatherMap"; version="1.1"; sha256="0h1yw93v06bx8svhghh1fsrf837qax9896klh64b06djpgg9ngb9"; depends=[httr jsonlite RCurl]; }; - ROptEst = derive2 { name="ROptEst"; version="1.0.1"; sha256="0160xs3bmk1bdan7gkibc50qfzxlmi413grvs0bib74xlr0x2kgj"; depends=[distr distrEx distrMod RandVar RobAStBase startupmsg]; }; - ROptEstOld = derive2 { name="ROptEstOld"; version="0.9.2"; sha256="0blf34xff9pjfy983xm7a27xqkh9173nk64ysas6f0g4h31gh8ax"; depends=[distr distrEx evd RandVar]; }; - ROptRegTS = derive2 { name="ROptRegTS"; version="0.9.1"; sha256="1a8pbn63wh2w2n409yzbwvarvhphcn82rdqjh407ch3k3x6jz3r5"; depends=[distr distrEx RandVar ROptEstOld]; }; - ROptSpace = derive2 { name="ROptSpace"; version="0.1.2"; sha256="0g5v4kf5kkylc3agizv2r534dnbgkjap1x146hdgl4jx2ggddnfk"; depends=[Rdpack]; }; + ROptEst = derive2 { name="ROptEst"; version="1.1.0"; sha256="147418w2njjqb9f9iga4ap7vmxi80y1np6ksgx8g546daswmdclp"; depends=[distr distrEx distrMod MASS RandVar RobAStBase startupmsg]; }; + ROptEstOld = derive2 { name="ROptEstOld"; version="1.1.0"; sha256="0wmwijzh614angm272glyikn8g64arj11an58knrgnvjc3lz8rx6"; depends=[distr distrEx evd RandVar]; }; + ROptRegTS = derive2 { name="ROptRegTS"; version="1.1.0"; sha256="1kjmyn182283llb02kf0ky1fyvw5l4p21q9s64y3hi5pahrqmr1v"; depends=[distr distrEx RandVar ROptEstOld]; }; + ROptSpace = derive2 { name="ROptSpace"; version="0.2.0"; sha256="119b3q43rkqhyprs0vx9wwsddq3awbj2mizzwqhpjjzz4gp5v866"; depends=[Rdpack]; }; ROptimizely = derive2 { name="ROptimizely"; version="0.2.0"; sha256="059zfn6y687h989wryvpqwgnp9njrrr4ys0gf1ql4pw85b2c50dy"; depends=[httr jsonlite]; }; ROracle = derive2 { name="ROracle"; version="1.3-1"; sha256="07zqzwaq5iqkjcmns2ahl1l71xjlznialb3dbyl4lwsh3p3fhf2n"; depends=[DBI]; }; - RPANDA = derive2 { name="RPANDA"; version="1.3"; sha256="0rah5l5nfjs65zxgsgsy3q3vaph6qkr7p41x3arfhjsyma96p0zn"; depends=[ape BioGeoBEARS cluster corpcor deSolve fpc igraph mvMORPH mvtnorm phytools picante pspline pvclust TESS]; }; + RPANDA = derive2 { name="RPANDA"; version="1.4"; sha256="005dc04h0lv2fi6i3qspyqyd0c134ad9c80ar3m6ahqzk369kq6w"; depends=[ape BioGeoBEARS cluster corpcor deSolve fpc geiger glassoFast igraph mvMORPH mvtnorm phytools picante pspline pvclust TESS]; }; RPCLR = derive2 { name="RPCLR"; version="1.0"; sha256="03kpyszsjb656lfwx2yszv0a9ygxs1x1dla6mpkhcnqw00684fab"; depends=[MASS survival]; }; RPEXE_RPEXT = derive2 { name="RPEXE.RPEXT"; version="0.0.1"; sha256="0m5ml8ywxrf66mjz6m3xp1lajd7wdq9g7xsaln8n7ykq7h5615fc"; depends=[]; }; RPEnsemble = derive2 { name="RPEnsemble"; version="0.4"; sha256="0y9g22swcz0m5jbzi87ahxw27fb3jlf3iwvxb73kkzixqlvksw9y"; depends=[class MASS]; }; @@ -2981,41 +3106,42 @@ in with self; { RPMM = derive2 { name="RPMM"; version="1.25"; sha256="1j48dh434wfhfzka0l21w6f73qlwfm70r9gdddhn504i2d5m4jph"; depends=[cluster]; }; RPPairwiseDesign = derive2 { name="RPPairwiseDesign"; version="1.0"; sha256="0k2vh698rhs5a0b5vhyvrnnwqnagdzs591zx6hn9vbmm8rm4y1dm"; depends=[]; }; RPPanalyzer = derive2 { name="RPPanalyzer"; version="1.4.5"; sha256="0cf4mb7mjp7x3k7083c8n8fjbvrmcgq359wh6pdyj817mgkanqzv"; depends=[Biobase gam ggplot2 gplots Hmisc lattice limma quantreg]; }; + RPS = derive2 { name="RPS"; version="1.0.1"; sha256="16n6wknw2m56kwi6rswgxjwjqblhaz5gyw94f96a7l6navqnvlp4"; depends=[ape geomorph Gmedian igraph MASS matlab]; }; RPostgreSQL = derive2 { name="RPostgreSQL"; version="0.6-2"; sha256="1mdhw5821v2h7hpa53v10wz53k4i90r0vb6a3dia5gq8f9j1h088"; depends=[DBI]; }; RPostgres = derive2 { name="RPostgres"; version="1.1.1"; sha256="1s25lkb69dkc5zk5ikbqa325jw5kfavghsq7s26mrcng4va9dz6i"; depends=[BH bit64 blob DBI hms plogr Rcpp withr]; }; - RPresto = derive2 { name="RPresto"; version="1.3.0"; sha256="01w832ia4c44nhir5rzw33qa8h7afmf04vkfdlg32jaqi1gv5861"; depends=[DBI httr jsonlite openssl Rcpp stringi]; }; - RProtoBuf = derive2 { name="RProtoBuf"; version="0.4.11"; sha256="0q05hdlbgbjydi0x80kgfayfkisalvmb9wy1n6afcw66pbikyb4l"; depends=[Rcpp RCurl]; }; + RPresto = derive2 { name="RPresto"; version="1.3.2"; sha256="14cwdm1r7x97l086hczrkaskx21agi7d8isklnkplchq5gnqs9ir"; depends=[DBI httr jsonlite openssl Rcpp stringi]; }; + RProtoBuf = derive2 { name="RProtoBuf"; version="0.4.12"; sha256="0slyrlywvxg6m0yqarv3d2g7fmwbbhvgcd408hccp3klppl4dfsq"; depends=[Rcpp RCurl]; }; RPtests = derive2 { name="RPtests"; version="0.1.4"; sha256="1r30pslbjq3dip41la81jlin2vhxdmayg902x9ryjy554awfgh7j"; depends=[glmnet randomForest Rcpp]; }; RPublica = derive2 { name="RPublica"; version="0.1.3"; sha256="1w2pn1g44a00ls8kkzj53a739pq6vzp38px2k0yh10rlzimmb21l"; depends=[curl httr jsonlite]; }; RPushbullet = derive2 { name="RPushbullet"; version="0.3.1"; sha256="15cb1zlfnjaf5z4dqx3xrkbkja152ah7jhs21qhvfl20qz4cyh7r"; depends=[curl jsonlite]; }; RQDA = derive2 { name="RQDA"; version="0.3-1"; sha256="1kqax4m4n5h52gi0jaq5cvdh1dgl0bvn420dbws9h5vrabbw1c1w"; depends=[DBI gWidgets gWidgetsRGtk2 igraph RGtk2 RSQLite]; }; - RQEntangle = derive2 { name="RQEntangle"; version="0.1.1"; sha256="1bkx95x1dwa8w6w1qj2aflcsvapa6sipfvqpgngwbp93m0fc10ws"; depends=[iterators itertools]; }; - RQGIS = derive2 { name="RQGIS"; version="1.0.3"; sha256="0wrzjfxwciirl838lakcw7f6qyqyykqd999c9krll5krqzyq7c3c"; depends=[raster RCurl readr reticulate rgdal sf sp stringr XML]; }; - RQuantLib = derive2 { name="RQuantLib"; version="0.4.4"; sha256="1pki0c265nmgph9dbz2pyrq8h7295mxswavfdwsr7m1lpbpzk8s5"; depends=[Rcpp zoo]; }; - RRF = derive2 { name="RRF"; version="1.8"; sha256="09y9f3zx9jcn7rs6an7b0hvjavy2li7rl5nknxzxfx7qnlqajnld"; depends=[]; }; + RQEntangle = derive2 { name="RQEntangle"; version="0.1.2"; sha256="098s9wxcdxcarvrpn2r88kd9lyshiv9z42k6d2mlqkbcwxpz82vn"; depends=[iterators itertools]; }; + RQGIS = derive2 { name="RQGIS"; version="1.0.4"; sha256="0x4jilj5nbikgkcg09913v3dgnfw0aqwwx66xajsfk5lqi6w5vjz"; depends=[raster RCurl readr reticulate rgdal sf sp stringr XML]; }; + RQuantLib = derive2 { name="RQuantLib"; version="0.4.5"; sha256="1q0i6dcyyfkdzpgp6s5izj3wa0280n7a0fv2gvlff9xlrmr3j27x"; depends=[Rcpp zoo]; }; + RRF = derive2 { name="RRF"; version="1.9"; sha256="1j8s07h0bn8imi0g1lkdwismisd6m4v454nldjp5jl11lffyiiaq"; depends=[]; }; RRNA = derive2 { name="RRNA"; version="1.0"; sha256="14rcqh95ygybci8hb8ays8ikb22g3850s9f3sgx3r4f0ky52dcba"; depends=[]; }; - RRPP = derive2 { name="RRPP"; version="0.2.0"; sha256="0wi7b9vwghw96d7v46mq3rpi4iggm1h6948rkbj32zqnxg7sfq3r"; depends=[]; }; + RRPP = derive2 { name="RRPP"; version="0.3.0"; sha256="0f9p6z8lx63d3d34x6lbpiqq26mipa2rbffkk21z7r3qgb7adzil"; depends=[]; }; RRTCS = derive2 { name="RRTCS"; version="0.0.3"; sha256="1riz1gjx3c0pf17xwybizb94nm5zgmfsnv6np3afvw831mb1x3l9"; depends=[sampling samplingVarEst]; }; RRate = derive2 { name="RRate"; version="1.0"; sha256="1q3f2gphdf50aijnk5xqfpxcqfd4jq7byb1gpb0vcnaxgi3a9lwm"; depends=[]; }; RRedshiftSQL = derive2 { name="RRedshiftSQL"; version="0.1.2"; sha256="03jbml8d19hcg6achnyc4hcnl5j10yvsx59j80r46zyn0flsnizq"; depends=[DBI RPostgreSQL]; }; RRphylo = derive2 { name="RRphylo"; version="1.0.0"; sha256="1h167w16lky8aa18fc90rgclx1by3qa9d69n72dxmjzy0d14zjc6"; depends=[ape doParallel foreach geiger lmtest mvMORPH phangorn phytools pvclust R_utils rlist scales smatr]; }; - RRreg = derive2 { name="RRreg"; version="0.6.8"; sha256="1x8jn7wn1vr4wqk1wjmgk7v5lg20giin735gnvf2mm56ji5amq4d"; depends=[doParallel foreach lme4]; }; + RRreg = derive2 { name="RRreg"; version="0.7.0"; sha256="023yfx5mvpzdhns897ibijc7hbr1771c2k6h1yhiy4b7pnaxl0n6"; depends=[doParallel foreach lme4]; }; RSA = derive2 { name="RSA"; version="0.9.12"; sha256="0ii7isrk6c1wb3clbwqzr37v2kypwszi4rjf4caip96bmh7jg3kq"; depends=[aplpack ggplot2 lattice lavaan plyr RColorBrewer tkrplot]; }; RSADBE = derive2 { name="RSADBE"; version="1.0"; sha256="1nzpm88rrzavk0n8iflsx8r3s1xcry15n80zqdw6jijjycz10w1q"; depends=[]; }; RSAGA = derive2 { name="RSAGA"; version="1.2.0"; sha256="1fkwgjicw8yrnkq1r925c22nn8khz6afksba6jpvm1jbwlkmhpzw"; depends=[gstat plyr rgdal shapefiles]; }; - RSAP = derive2 { name="RSAP"; version="0.9"; sha256="1sxirfabhpmfm0yiiazc9h1db70hqwva2is1dql6sjfanpl8qanl"; depends=[reshape yaml]; }; RSAlgaeR = derive2 { name="RSAlgaeR"; version="1.0.0"; sha256="1hp0v2vkj9ixiv541d53kyl0ph3jsdc5w98r81gv5ck5ixrp6bxp"; depends=[cvTools ggplot2 hydroGOF lubridate mblm plyr]; }; RSCABS = derive2 { name="RSCABS"; version="0.9.3"; sha256="08ykkqx9rdx5s6wg2idxz35ddpsz1lir22vrjs92k51zq0jrkhv9"; depends=[gWidgets gWidgetsRGtk2 R2HTML RGtk2]; }; - RSDA = derive2 { name="RSDA"; version="2.0.4"; sha256="1pmqwrwjmw5fsvx3aiy8q4w4w0zh81l1118ny5g3rrb5g6ybnrxs"; depends=[abind dplyr FactoMineR ggplot2 glmnet lazyeval nloptr pander princurve purrr RColorBrewer RJSONIO rlang scales scatterplot3d sqldf stringr tibble tidyr tidyselect XML xtable]; }; - RSEIS = derive2 { name="RSEIS"; version="3.8-1"; sha256="0i4wlym8glsg90fxmzagji45xni2s04jzyrbakkil09n9rpsrl6n"; depends=[RPMG Rwave]; }; - RSGHB = derive2 { name="RSGHB"; version="1.1.2"; sha256="0b2v17p3a3sy8jc4vy0nq65sdkxyf0b8sf5f78yvdcn5knydah6c"; depends=[]; }; + RSDA = derive2 { name="RSDA"; version="2.0.8"; sha256="1lnqncjmqci6lbdm2pph6ankwb9vhwi7mvgjip2qvc2ydgyv6gy9"; depends=[abind dplyr FactoMineR ggplot2 ggpolypath glmnet lazyeval nloptr pander princurve purrr randomcoloR reshape RJSONIO rlang scales scatterplot3d sqldf stringr tibble tidyr tidyselect XML xtable]; }; + RSE = derive2 { name="RSE"; version="1.2"; sha256="0ypz24vag0ipkg04fl2gzqh77kmwryzml6sdsj0l27cczz1yzagw"; depends=[]; }; + RSEIS = derive2 { name="RSEIS"; version="3.8-3"; sha256="1qrv41r17svz7dyzz1sik5zyqck29mzzxrjhj5q6mvrwag3x7fi5"; depends=[RPMG Rwave]; }; + RSGHB = derive2 { name="RSGHB"; version="1.2.0"; sha256="0rzmpx95ac8z625rz3sa9hgzv269q0fdq0crl8hdf1yyzrhrjr3d"; depends=[MCMCpack]; }; RSIP = derive2 { name="RSIP"; version="1.0.0"; sha256="1yddqbnz0av69l53y83m7rnznc42qz66fc3qrispzaajs7p9n8d7"; depends=[ncdf4 raster rasterVis rgdal sp]; }; RSKC = derive2 { name="RSKC"; version="2.4.2"; sha256="0r9gpwhzscb6rbba3dg13p78pvskahgvsd59biag0shyii3xvwpm"; depends=[flexclust]; }; - RSNNS = derive2 { name="RSNNS"; version="0.4-10"; sha256="1khsv1sy8jgsl9s5fypcg77lzj811xzrygwnq6ki9v375sk383gh"; depends=[Rcpp]; }; + RSNNS = derive2 { name="RSNNS"; version="0.4-11"; sha256="0z27rgbqa1lsxvcqyl1456mb0pigvkrx099hdqv7zr4ax4k33547"; depends=[Rcpp]; }; RSNPset = derive2 { name="RSNPset"; version="0.5.3"; sha256="1llx6anwkl4as0hdyvmsrlg9z8mkn9p1qxgs6kqs39w87gyx0j36"; depends=[doRNG fastmatch foreach qvalue Rcpp RcppEigen]; }; RSPS = derive2 { name="RSPS"; version="1.0"; sha256="0ynxhgnxsf27qm8r5d9lyd59zksnc3kvx35hy25vff8j3bg7fqgi"; depends=[gridExtra lattice plyr]; }; RSQLite = derive2 { name="RSQLite"; version="2.1.1"; sha256="1giwk4335sc6yhj3rs8h070g1mwy38kyqyqv6vcfxvskykj7vp6z"; depends=[BH bit64 blob DBI memoise pkgconfig plogr Rcpp]; }; - RSSL = derive2 { name="RSSL"; version="0.6.1"; sha256="03f0i0v0nygkcci42h4bh7jngxz15wsd78cn2zkzbrqadz1c61r5"; depends=[cluster dplyr ggplot2 kernlab MASS Matrix quadprog Rcpp RcppArmadillo reshape2 scales tidyr]; }; + RSSL = derive2 { name="RSSL"; version="0.7"; sha256="0sir01ri4j5igwqm5bj9i99s35gli7yzxxpw1fwi83gdmhh800ap"; depends=[cluster dplyr ggplot2 kernlab MASS Matrix quadprog Rcpp RcppArmadillo reshape2 scales tidyr]; }; RSSOP = derive2 { name="RSSOP"; version="1.1"; sha256="119xrxpaf68qdb2kj2pbaja6im2nbxsgibb1bnlpnc3fcxkmqcsf"; depends=[]; }; RSSampling = derive2 { name="RSSampling"; version="1.0"; sha256="0p10l7qmksx4ysz1jb84f9nbqzig8wxhwy33yk8hq29nb5i4c9ik"; depends=[LearnBayes]; }; RSVGTipsDevice = derive2 { name="RSVGTipsDevice"; version="1.0-7"; sha256="0jdr8l0hp4kzsvlgs8j1m74sr98z4v2lmiqinmc238m406nhppab"; depends=[]; }; @@ -3023,7 +3149,8 @@ in with self; { RSauceLabs = derive2 { name="RSauceLabs"; version="0.1.6"; sha256="1p7hw6vnlg6w5ggmfpc3q3s6n1fikjkjnxzz97jifiy0zwn5dp9i"; depends=[data_table httr jsonlite whisker xml2]; }; RSclient = derive2 { name="RSclient"; version="0.7-3"; sha256="07mbw6mcin9ivsg313ycw2pi901x9vjpmi6q7sms1hml4yq50k6h"; depends=[]; }; RSeed = derive2 { name="RSeed"; version="0.1.60"; sha256="0rvb6w4z5c2wcdgx5w6vv7c8il8d0096pgv3fyvw21ag25z605jc"; depends=[graph RBGL sybil]; }; - RSentiment = derive2 { name="RSentiment"; version="2.2.1"; sha256="0djp530yzj5a6y5nqk98pdvsgy9apqcqvkz0yjqx6856d9wrycm0"; depends=[NLP openNLP plyr stringr]; }; + RSelenium = derive2 { name="RSelenium"; version="1.7.4"; sha256="0djd6bgy2vr85pmcvnq0h2dji20laz852kpn9q8rswxgqb59lqk2"; depends=[binman caTools httr openssl wdman XML]; }; + RSentiment = derive2 { name="RSentiment"; version="2.2.2"; sha256="15d1llzxg1apkwykpb7pic2d5lfj9i9a55hab067wrz2yq5jsyfa"; depends=[NLP openNLP plyr stringr]; }; RSiena = derive2 { name="RSiena"; version="1.2-12"; sha256="1bc0vdqqzkf3q3b6rzqiwd29lcq8vbvlj2qkxbx6v8wjphycz6rw"; depends=[lattice MASS Matrix]; }; RSiteCatalyst = derive2 { name="RSiteCatalyst"; version="1.4.15"; sha256="13mrqf458m43g435g4pbg49pid63f4ap1r8jzl84mvj1b36hy4q6"; depends=[base64enc digest httr jsonlite plyr stringr]; }; RSmartlyIO = derive2 { name="RSmartlyIO"; version="0.1.2"; sha256="0phkk79ng4r54w3d4ajl505gs8svlzdf1g6q50lhraq2cbllbvgx"; depends=[RCurl]; }; @@ -3034,6 +3161,7 @@ in with self; { RStoolbox = derive2 { name="RStoolbox"; version="0.2.3"; sha256="06b54g186bwgl5g8wkbj6q05bdy6sqvx433xwwvj7az1qxpa5kwr"; depends=[caret codetools doParallel foreach geosphere ggplot2 raster Rcpp RcppArmadillo reshape2 rgdal rgeos sp XML]; }; RStorm = derive2 { name="RStorm"; version="0.902"; sha256="1apk358jwzg5hkrcq8h39rax1prgz9bhkz9z51glmci88qrw1frv"; depends=[plyr]; }; RStripe = derive2 { name="RStripe"; version="0.1"; sha256="0vp7zsd5xm8rf7196fivb76kkmxfx3gawxlyjhn9xqv92vawivra"; depends=[httr jsonlite RCurl]; }; + RSuite = derive2 { name="RSuite"; version="0.33-246"; sha256="0npaafcz4afpcyvwp7bjyc7vlsypid03rspwb00sf0z3v8k6k1r9"; depends=[devtools git2r httr jsonlite logging processx roxygen2]; }; RSurveillance = derive2 { name="RSurveillance"; version="0.2.0"; sha256="1lvl9msnd8l9svd9nyivx1cqfmcxirxvfjfj0xv7yjklza8af7w3"; depends=[epiR epitools mc2d]; }; RSurvey = derive2 { name="RSurvey"; version="0.9.3"; sha256="0yk969jdvpgv01zbmk4zyxcmrbdizh37bddj1k128ndyf191z37x"; depends=[colorspace inlmisc MBA raster rgdal rgeos sp]; }; RSvgDevice = derive2 { name="RSvgDevice"; version="0.6.4.4"; sha256="0vplac5jzg6bmvbpmj4nhiiimsr9jlbk8mzyifnnndk9iyf2lcmz"; depends=[]; }; @@ -3044,7 +3172,8 @@ in with self; { RTaxometrics = derive2 { name="RTaxometrics"; version="2.3"; sha256="02446y86g21i37ycavg0xc1ggxk0k93d38n71fis9fav06lywxx3"; depends=[]; }; RTextTools = derive2 { name="RTextTools"; version="1.4.2"; sha256="1j3zfywq8xgax51mbizxz704i3ys4vzp8hyi5kkjzq6g2lw7ywq2"; depends=[caTools e1071 glmnet ipred maxent nnet randomForest SparseM tau tm tree]; }; RTextureMetrics = derive2 { name="RTextureMetrics"; version="1.1"; sha256="0d0mvpmcpd62cvqlajrqp32lnvpflyf9bqvdzly2v8v1kb8274fc"; depends=[]; }; - RTransProb = derive2 { name="RTransProb"; version="0.3.0"; sha256="010nsw97b0yi5l6fkwx04aacv47fww9lp7pgjdm8nb7gg9yif2bx"; depends=[caret chron e1071 expm MASS Matrix matrixStats neuralnet nnet pracma Rcpp RcppArmadillo zoo]; }; + RTransProb = derive2 { name="RTransProb"; version="0.3.3"; sha256="1fl8ag7aizj7k7j5ypx632qa98jp3wp8z3mp5z490n1277ajzrkb"; depends=[caret chron e1071 expm MASS Matrix matrixStats neuralnet nnet pracma Rcpp RcppArmadillo zoo]; }; + RTransferEntropy = derive2 { name="RTransferEntropy"; version="0.2.7"; sha256="16mrhbjg0s09vqxwllsm1q7wzx0kma7gfzyh0szhcf62z5y0a2x1"; depends=[future future_apply Rcpp]; }; RTriangle = derive2 { name="RTriangle"; version="1.6-0.10"; sha256="07ya95gmv53i2argqwgad6wd4sslql2wl1rkvsmgsvmhsb4wp9hd"; depends=[]; }; RUnit = derive2 { name="RUnit"; version="0.4.32"; sha256="1wc1gwb7yw7phf8b0gkig6c23klya3ax11c6i4s0f049k42r78r3"; depends=[]; }; RVAideMemoire = derive2 { name="RVAideMemoire"; version="0.9-69-3"; sha256="18m4f1h0jnc8k03vpmyr8gcr4l6k0anjy660qrz8sqcaasp3ikj1"; depends=[ade4 boot car cramer dunn_test FactoMineR lme4 MASS mixOmics multcompView nnet pls pspearman vegan]; }; @@ -3052,12 +3181,13 @@ in with self; { RVideoPoker = derive2 { name="RVideoPoker"; version="0.3"; sha256="06s4dlw0pw8rcq5b31xxqdpdk396rf27mai2vpvmn585vbm1ib7a"; depends=[pixmap rpanel tkrplot]; }; RViennaCL = derive2 { name="RViennaCL"; version="1.7.1.7"; sha256="08mhn6732sb284y4garx0nvhad4r42pk39p3r82fad4c1c3rxkhg"; depends=[]; }; RVowpalWabbit = derive2 { name="RVowpalWabbit"; version="0.0.12"; sha256="1x3pq6cnkjashf49imrw76xkw9nzqgn9132l03l9v4vacgh0s47m"; depends=[Rcpp]; }; - RVsharing = derive2 { name="RVsharing"; version="1.7.0"; sha256="1z1jwj6dzyib8sxpz4p4wpiizfhxz6sp62nnig779rhnv7wfkqqf"; depends=[kinship2]; }; RVtests = derive2 { name="RVtests"; version="1.2"; sha256="0k7w6ml981zvr5bix197qw4kaf7rz5jqnwqlxf7aryxbm39gk16c"; depends=[glmnet pls spls]; }; RWBP = derive2 { name="RWBP"; version="1.0"; sha256="104vr2cdk185hh4zn3vmqvb14p1q8ifk11wdgvk7fli1m1zxxwdd"; depends=[igraph lsa RANN SnowballC]; }; + RWDataPlyr = derive2 { name="RWDataPlyr"; version="0.6.2"; sha256="1928hyfmy21s586nafd5qajbypqslc96zfmxbi42rcmvzim16v3k"; depends=[data_table dplyr feather Rcpp tibble tidyr xts zoo]; }; RWebLogo = derive2 { name="RWebLogo"; version="1.0.3"; sha256="1n65mlnr163ywjnyyngnigbj0wpgkr38c3nx8hw5r8mwjnf3d617"; depends=[findpython]; }; - RWeka = derive2 { name="RWeka"; version="0.4-38"; sha256="1c0jvz2d04h31g4mp8sg9vrp5138n97gavji18yiij7pd11g5qda"; depends=[rJava RWekajars]; }; - RWekajars = derive2 { name="RWekajars"; version="3.9.2-1"; sha256="006n7m3qxnzvfhkzcr0nbwqdlhygzdhyp8x3534dx6075bm00v0f"; depends=[rJava]; }; + RWeightedKmeans = derive2 { name="RWeightedKmeans"; version="1.1.0"; sha256="07qnwcg4b4dls6jgk1jz23s4y11ml86hs9ghmd3hdh5rcmri879s"; depends=[clusterCrit fpc]; }; + RWeka = derive2 { name="RWeka"; version="0.4-39"; sha256="00sg0k7pcm654agm7dd6sq6yhwk65q6pfp7m92d825m2wpzlzn0d"; depends=[rJava RWekajars]; }; + RWekajars = derive2 { name="RWekajars"; version="3.9.3-1"; sha256="16syvpc9qfn19sjdp3jikmzccj198ybr8dar7fajfaqsfms2kgfw"; depends=[rJava]; }; RWiener = derive2 { name="RWiener"; version="1.3-1"; sha256="0w12xvc18l002m8q6ad3laa667xzqjbcfqf0vvcmicgw2j3bbq6h"; depends=[]; }; RWildbook = derive2 { name="RWildbook"; version="0.9.3"; sha256="1pznzmv8n33hhj61h07fha1gzafcx705n8323cnz3mx6ziijfh28"; depends=[data_table jsonlite marked]; }; RXKCD = derive2 { name="RXKCD"; version="1.8-2"; sha256="081zrx293z4009p6fj2za0mkf04nikxmg3i45l667qvy7nmajqlc"; depends=[jpeg png RJSONIO]; }; @@ -3069,19 +3199,20 @@ in with self; { RZigZag = derive2 { name="RZigZag"; version="0.1.6"; sha256="1sb1lmm5vnzkbzqxbmipkm2zb01zg2x15jgyrsplardyy8kpqxn7"; depends=[Rcpp RcppEigen]; }; RZooRoH = derive2 { name="RZooRoH"; version="0.1.1"; sha256="10l7i4fdjvq921ngbcd5kmbaq9zvl44p5clyd6zyq8d7598ffz77"; depends=[data_table doParallel foreach iterators RColorBrewer]; }; RaPKod = derive2 { name="RaPKod"; version="0.9"; sha256="1qxzi2lf431zd44bcd98ybhzydy1cz12g864l6r668jk91aqy1qg"; depends=[kernlab MASS proxy Rcpp RcppArmadillo]; }; + RaceID = derive2 { name="RaceID"; version="0.1.1"; sha256="0aw6jkjval1wm210i32znwjw1vsff8b95bam9fnss5rg1adha2j1"; depends=[cluster coop FateID fpc ica igraph irlba locfit MASS Matrix pheatmap quadprog randomForest RColorBrewer Rtsne vegan]; }; RadOnc = derive2 { name="RadOnc"; version="1.1.4"; sha256="1ri6ybzhfdgbrbfcy12mmvv2ipg61az7vwp1dbjyzs8mgsc1cxb5"; depends=[geometry oro_dicom ptinpoly rgl]; }; RadTran = derive2 { name="RadTran"; version="1.0"; sha256="1sb8d4y3b37akbxhdavxrkp34zn3ip061b7gzy0ga57pyn76cvpn"; depends=[ReacTran rootSolve]; }; RadioSonde = derive2 { name="RadioSonde"; version="1.4"; sha256="1v9jdpynmb01m3syhas1s08xxlvjawhlvjkyhils2iggi4xw4hiq"; depends=[]; }; Radviz = derive2 { name="Radviz"; version="0.7.0"; sha256="0x1b3s3i3f775m7ragvzpdswljry8adbkjb6aq35aqasnkvvnysq"; depends=[gridBase hexbin KernSmooth MASS]; }; - RagGrid = derive2 { name="RagGrid"; version="0.1.1"; sha256="0jx3ch42ilcf6baw0pv42cs9lbhharma78bd8vps403p69ray4z8"; depends=[crosstalk htmltools htmlwidgets knitr]; }; + RagGrid = derive2 { name="RagGrid"; version="0.2.0"; sha256="0crnpd75lyhd0awzqzqy7bzw4ydgxpyhy1ybb1ff4qsnisbjdbba"; depends=[crosstalk htmltools htmlwidgets knitr]; }; Ramble = derive2 { name="Ramble"; version="0.1.1"; sha256="0225za85i5nvf8l89i5bz7nxsxykd3v9fp1wgihmncca6n8vhgpl"; depends=[]; }; - Rambo = derive2 { name="Rambo"; version="1.1"; sha256="1yc04xsfkc54y19g5iwambgnlc49ixjjvfrafsgis2zh5w6rjwv8"; depends=[sna]; }; + Rambo = derive2 { name="Rambo"; version="1.1.1"; sha256="036rvjj6gcnf2gg5xl55n5p8j1pzifb9wmlpwnymz1csxgkl477i"; depends=[sna]; }; RandMeta = derive2 { name="RandMeta"; version="0.1.0"; sha256="0bh3rkdfmwqym47q8f90pw3mmx7q8jyp4rz16ggqrmk1b5bdyqjb"; depends=[]; }; RandPro = derive2 { name="RandPro"; version="0.2.0"; sha256="1bhbg6lvgr9h6rq3g3ljm2422ngjb18maj80l7f659ql88c8h6mj"; depends=[caret e1071]; }; - RandVar = derive2 { name="RandVar"; version="1.0.1"; sha256="0vj0p46xmj4129m6r5zg85fnvb5kx1ardwwk55nqypkxd0v58a4j"; depends=[distr distrEx startupmsg]; }; + RandVar = derive2 { name="RandVar"; version="1.1.0"; sha256="1kb7b12laf2vvc2m3xfh8wdxb0vcapns52qfbkpn8hg6ba75s1px"; depends=[distr distrEx startupmsg]; }; RandomFields = derive2 { name="RandomFields"; version="3.1.50"; sha256="0j7852wvclglp820y2x5r19gsr6ciygbbpl5qvwj1khnlz1hfsid"; depends=[RandomFieldsUtils sp]; }; RandomFieldsUtils = derive2 { name="RandomFieldsUtils"; version="0.3.25"; sha256="0nxk7jhr61l9h76hf96f7ypakl4wip144c0gzr6rqsja6m75rjz3"; depends=[]; }; - RanglaPunjab = derive2 { name="RanglaPunjab"; version="2.3.1"; sha256="0hmami515jv916lxdwv31w3w2bjn954qwibvgw1qlqn8d5swndiw"; depends=[jpeg shiny tidyverse]; }; + RanglaPunjab = derive2 { name="RanglaPunjab"; version="2.3.4"; sha256="01j3gww9kil02d44jwlkz6j7lwn2him830bnshkly0s7mgh22pgr"; depends=[jpeg shiny tidyverse]; }; RankAggreg = derive2 { name="RankAggreg"; version="0.6.5"; sha256="031mff1zydxqygx8bn3g0qpwq08kaq5bpmzy6z2y0fa03hgsxz5c"; depends=[gtools]; }; RankResponse = derive2 { name="RankResponse"; version="3.1.1"; sha256="04s588zbxcjgvpmbb2x46bbf5l15xm7pwiaxjgc1kn1pn6g1080c"; depends=[]; }; Rankcluster = derive2 { name="Rankcluster"; version="0.94"; sha256="0ak6cpm073ym4h9l3j7pq0ks9h4is1hzxfjn52j23nc5ifq3fjpq"; depends=[Rcpp RcppEigen]; }; @@ -3096,6 +3227,7 @@ in with self; { Rbitcoin = derive2 { name="Rbitcoin"; version="0.9.2"; sha256="0ndq4kg1jq6h0jxwhpdp8sw1n5shg53lwa1x0bi7rifmy0gnh66f"; depends=[data_table digest RCurl RJSONIO]; }; Rblpapi = derive2 { name="Rblpapi"; version="0.3.8"; sha256="1d1b3rdp9zqz9x6xb7zmbs4yrz339qjvlhif7s8ifcz1zdpzzhal"; depends=[BH Rcpp]; }; Rborist = derive2 { name="Rborist"; version="0.1-8"; sha256="0zr8vfbv11ascng7n2zv5xbqv7h0r0bycwn8bqlq8q10y2lyxg70"; depends=[Rcpp RcppArmadillo]; }; + Rcan = derive2 { name="Rcan"; version="1.3.61"; sha256="1fbs72f5q5c9sn0m14izna2dpppjy4bgm4sfbhpybbkfkj567mqq"; depends=[data_table ggplot2 scales]; }; Rcapture = derive2 { name="Rcapture"; version="1.4-2"; sha256="1nsxy5vpfv7fj03i6l5pgzjm0cldwqxxycnvqkfkshbryjcyl0ps"; depends=[]; }; RcellData = derive2 { name="RcellData"; version="1.3-2"; sha256="1zzkgpj2pc42xzz5pspyj981a04gjpna4br3lxna255366ijgz4l"; depends=[]; }; Rcereal = derive2 { name="Rcereal"; version="1.2.1"; sha256="0nl4p0wqpni16z62610sqcxsz1x6kannl2s1zakpmjkk80pyxlk6"; depends=[]; }; @@ -3104,8 +3236,8 @@ in with self; { RchivalTag = derive2 { name="RchivalTag"; version="0.0.7"; sha256="0i25rj3f54km2gdr8izgvqdbdbcq4nikywn5narm7sg79fv43pd4"; depends=[mapdata maps maptools ncdf4 oceanmap PBSmapping plyr raster rgeos sp]; }; Rchoice = derive2 { name="Rchoice"; version="0.3-1"; sha256="1mx50270vbhvng4vdcc6w94f3l890vjl41y07bqkv40n93fxvffw"; depends=[Formula maxLik msm plm plotrix]; }; Rclean = derive2 { name="Rclean"; version="1.0.0"; sha256="065jq957xsk9p1nnzf8ilp9swjfxhydgc7xg57lfcg9hz99ckwfr"; depends=[formatR igraph jsonlite]; }; - Rcmdr = derive2 { name="Rcmdr"; version="2.4-4"; sha256="0n15wkhn8hfhcpz0n2ngxkfaysjsizksxxr1fhpfjmlpy4wxxnx0"; depends=[abind car effects RcmdrMisc relimp tcltk2]; }; - RcmdrMisc = derive2 { name="RcmdrMisc"; version="1.0-10"; sha256="1fxcm0iwxdqh9qv2g6w7sqbg23zgl5z5ib2x69j5n10fglx89m8f"; depends=[abind car colorspace e1071 foreign haven Hmisc MASS nortest readstata13 readxl sandwich]; }; + Rcmdr = derive2 { name="Rcmdr"; version="2.5-1"; sha256="0jw4bvv6wjznra6n9ad3hqvgfi5m9i8axyhms1kgqrcd5n4zcfcf"; depends=[abind car effects RcmdrMisc relimp tcltk2]; }; + RcmdrMisc = derive2 { name="RcmdrMisc"; version="2.5-1"; sha256="10cnvk541cx8lzapra2104dn1kh780phzz29dwvfwrx4k9vfbh7i"; depends=[abind car colorspace e1071 foreign haven Hmisc MASS nortest readstata13 readxl sandwich]; }; RcmdrPlugin_BiclustGUI = derive2 { name="RcmdrPlugin.BiclustGUI"; version="1.1.1"; sha256="1sdc8ibggz8wpn77g7hddyl7lg86dbyw8qax63p6cqx1pfhb4rra"; depends=[BcDiag BiBitR BicARE biclust fabia gplots iBBiG Rcmdr rqubic s4vd superbiclust viridis]; }; RcmdrPlugin_DoE = derive2 { name="RcmdrPlugin.DoE"; version="0.12-3"; sha256="1iifn71kjjgcp7dfz2pjq57mgbv4rrznrl3b3k9gdc2dva1z9zvc"; depends=[DoE_base DoE_wrapper FrF2 Rcmdr RcmdrMisc relimp]; }; RcmdrPlugin_EACSPIR = derive2 { name="RcmdrPlugin.EACSPIR"; version="0.2-2"; sha256="10r6rb0fwlilcnqxa38zh7yxc54x1a0by5x4f6gzdn9zs7aj5l1r"; depends=[abind ez nortest R2HTML Rcmdr RcmdrMisc reshape]; }; @@ -3121,25 +3253,22 @@ in with self; { RcmdrPlugin_KMggplot2 = derive2 { name="RcmdrPlugin.KMggplot2"; version="0.2-5"; sha256="069kpvhflk0rwwll0vyxfdrln1lzr1zhzfzm39si63ji6v7l6msb"; depends=[ggplot2 ggthemes plyr Rcmdr RColorBrewer scales survival tcltk2]; }; RcmdrPlugin_MA = derive2 { name="RcmdrPlugin.MA"; version="0.0-2"; sha256="1zivlc0r2mkxpx23ba76njmb2wnnjijysvza4f24dg4l47d0sr2p"; depends=[MAd metafor Rcmdr]; }; RcmdrPlugin_MPAStats = derive2 { name="RcmdrPlugin.MPAStats"; version="1.2.2"; sha256="1ynj42p12ncgrbghd8w7mkyys2cq9r9dpbir57rj3k5l46yzj7d5"; depends=[ordinal Rcmdr]; }; - RcmdrPlugin_NMBU = derive2 { name="RcmdrPlugin.NMBU"; version="1.8.8"; sha256="1s7947zvrhjrc7vchvaajp2q7xdqfg5vsmg6r7ym416cqq39i5kd"; depends=[MASS mixlm phia pls Rcmdr xtable]; }; + RcmdrPlugin_NMBU = derive2 { name="RcmdrPlugin.NMBU"; version="1.8.9"; sha256="1lwxmhla66nxrb6ph81vxa60pzga80z0vniq725y37w5zlqzgmcq"; depends=[MASS mixlm phia pls Rcmdr xtable]; }; RcmdrPlugin_OptimClassifier = derive2 { name="RcmdrPlugin.OptimClassifier"; version="0.1.2"; sha256="0gisjw1iniihy2c2mr9f9pxfnfr2dc0s482wb9yfn88vknx8d0rn"; depends=[OptimClassifier Rcmdr RcmdrMisc]; }; RcmdrPlugin_PcaRobust = derive2 { name="RcmdrPlugin.PcaRobust"; version="1.1.4"; sha256="17rq3sv8payazjjn5j37cgd6df5b62d2y8al3grw6hw5nfba7lvn"; depends=[Rcmdr robustbase rrcov tkrplot]; }; RcmdrPlugin_RMTCJags = derive2 { name="RcmdrPlugin.RMTCJags"; version="1.0-2"; sha256="04g5a1dpch54k5ckfkrg4vsap1nc3af1i0i559qigv3hy8n7pm80"; depends=[coda igraph Rcmdr rjags rmeta runjags]; }; RcmdrPlugin_ROC = derive2 { name="RcmdrPlugin.ROC"; version="1.0-18"; sha256="0alwsvwry4k65ps00zvdqky9rh663bbfaw15lhwydbgcpqdkn2n6"; depends=[pROC Rcmdr ResourceSelection ROCR]; }; - RcmdrPlugin_RiskDemo = derive2 { name="RcmdrPlugin.RiskDemo"; version="1.9"; sha256="014x9w9qhi0fl8y35k918m25ml1sr1pndcrdih7v3dibzy18qbbn"; depends=[demography Rcmdr rgl]; }; - RcmdrPlugin_SCDA = derive2 { name="RcmdrPlugin.SCDA"; version="1.1"; sha256="0pd765ndh8d7hy6spds3r4pi09i0ak4b1ygwczp6yr2zcs1aikbc"; depends=[Rcmdr SCMA SCRT SCVA]; }; + RcmdrPlugin_RiskDemo = derive2 { name="RcmdrPlugin.RiskDemo"; version="2.0"; sha256="1mclhcb138f13p7ghiggdm8zjrgxqrn3zn8biygfy6yvhw2j396p"; depends=[demography ftsa Rcmdr rgl]; }; + RcmdrPlugin_SCDA = derive2 { name="RcmdrPlugin.SCDA"; version="1.1.1"; sha256="0lky4vmia97vcpwsvzprgmkwkdwjwnmi8bdjx3r3w6rrc2lqb6a8"; depends=[Rcmdr SCMA SCRT SCVA]; }; RcmdrPlugin_SLC = derive2 { name="RcmdrPlugin.SLC"; version="0.2"; sha256="1nwpzmgfla1y05dxf81w0wmvvmvcq5jn5k8phlq30920ia7ybs8g"; depends=[Rcmdr SLC]; }; - RcmdrPlugin_SM = derive2 { name="RcmdrPlugin.SM"; version="0.3.1"; sha256="10sjh2x02kb6yaxbvd9ihc6777j4iv6wi6k42gyl3k7i2c39fyn3"; depends=[car colorspace Rcmdr RColorBrewer vcd]; }; RcmdrPlugin_TeachingDemos = derive2 { name="RcmdrPlugin.TeachingDemos"; version="1.1-0"; sha256="0fgl1v1g74ca14pf3mmbv26j09v7jy6ddyap5qavgiy9s8qrwrh8"; depends=[Rcmdr rgl TeachingDemos tkrplot]; }; - RcmdrPlugin_UCA = derive2 { name="RcmdrPlugin.UCA"; version="4.2-4"; sha256="17ivr48y0wh89nphjzfmgdgpsfsxw4n6bfwjln0crvqhm4xh6qmh"; depends=[randtests Rcmdr TeachingDemos tseries]; }; + RcmdrPlugin_UCA = derive2 { name="RcmdrPlugin.UCA"; version="4.2-5"; sha256="1skqqkii44ajdwqj6svk19n4z2vi9lp36j7bdhasd9ay3k8f9wgh"; depends=[randtests Rcmdr TeachingDemos tseries]; }; RcmdrPlugin_aRnova = derive2 { name="RcmdrPlugin.aRnova"; version="0.0.5"; sha256="0ys3565pcbr554yb1gi2h149vhvwc0gdfmh7mz8zzd4367hqn553"; depends=[Rcmdr]; }; RcmdrPlugin_coin = derive2 { name="RcmdrPlugin.coin"; version="1.0-22"; sha256="0qmdjnjmgq52wgl4llg69q9x7hvwd73mz3swv0sv88v8zqg7xj93"; depends=[coin multcomp Rcmdr survival]; }; RcmdrPlugin_depthTools = derive2 { name="RcmdrPlugin.depthTools"; version="1.3"; sha256="09mjn5jn4rdj1lh515vr3xlnk615flg13kcwbpk0an2si4xkgm9h"; depends=[depthTools Rcmdr]; }; - RcmdrPlugin_doex = derive2 { name="RcmdrPlugin.doex"; version="0.2.0"; sha256="0l3c8vwifyl8a7qkfaqxm7cws2cg1g501qa93w5svcgp03yf98mj"; depends=[multcomp Rcmdr]; }; - RcmdrPlugin_epack = derive2 { name="RcmdrPlugin.epack"; version="1.2.5"; sha256="1577qhac4rldifax5x3l39cddan6dhq2dv4iv2n64nadgrl0259w"; depends=[abind forecast MASS Rcmdr TeachingDemos tseries xts]; }; RcmdrPlugin_lfstat = derive2 { name="RcmdrPlugin.lfstat"; version="0.8.3"; sha256="1rcr43dqyb9zw9av3awkz0640vmvhxrafal5brnhqnpg4hfbpma3"; depends=[lfstat Rcmdr]; }; RcmdrPlugin_mosaic = derive2 { name="RcmdrPlugin.mosaic"; version="1.0-7"; sha256="0k6xaz2dfm9ch9lxqsh19jm8d4bbyjj2ffmjjxl57kanb3pvrrwv"; depends=[ENmisc Hmisc Rcmdr vcd]; }; - RcmdrPlugin_orloca = derive2 { name="RcmdrPlugin.orloca"; version="4.5"; sha256="1rjlc5v9ksndmzcdw5lkqvzxpsanvglm20ppbw49nna8rsylkj08"; depends=[orloca orloca_es Rcmdr]; }; + RcmdrPlugin_orloca = derive2 { name="RcmdrPlugin.orloca"; version="4.6"; sha256="1n48yckr76j3wrspwyji0jvfn65cmpxplczx403x61sd0b4836xi"; depends=[orloca orloca_es Rcmdr]; }; RcmdrPlugin_plotByGroup = derive2 { name="RcmdrPlugin.plotByGroup"; version="0.1-0"; sha256="10wc7lnihsrldsynq2s0syr1aqmvfnj9rhgwh1nkk7jlrwcgj0z6"; depends=[lattice Rcmdr]; }; RcmdrPlugin_pointG = derive2 { name="RcmdrPlugin.pointG"; version="0.6.6"; sha256="0sc3akbpdys353va05b40g3rq8qihw0pmhvv0kckkhsgrbr8mc07"; depends=[Rcmdr RColorBrewer]; }; RcmdrPlugin_qual = derive2 { name="RcmdrPlugin.qual"; version="2.2.6"; sha256="00wznh0k909cd9vwdj1ag3224xkqnwjsad1bfkgxbszsx0w6xvy9"; depends=[Rcmdr]; }; @@ -3151,21 +3280,22 @@ in with self; { RcmdrPlugin_temis = derive2 { name="RcmdrPlugin.temis"; version="0.7.10"; sha256="02rs5xdj6g57frndc87fly0ans16584j4d0rfpy1h72655cz66ab"; depends=[ca lattice latticeExtra NLP R2HTML Rcmdr RColorBrewer slam stringi tcltk2 tm zoo]; }; Rcolombos = derive2 { name="Rcolombos"; version="2.0.2"; sha256="0l92icjqqm5fxafqwd09lnmv5x6kvjdg8cphlm37q86nslwr5rkk"; depends=[httr]; }; Rcplex = derive2 { name="Rcplex"; version="0.3-3"; sha256="0abmrqphrpdlc831hwbwx15z4vdgn385kxhnqlbb9v0sjmfyszsl"; depends=[slam]; }; - Rcpp = derive2 { name="Rcpp"; version="0.12.17"; sha256="08xg8h3w25sdb3xr18g9pa0x8cirkdgljqapxmw56ss1j9fc89s2"; depends=[]; }; + Rcpp = derive2 { name="Rcpp"; version="0.12.19"; sha256="10mmiaawv9iwglc6z4y51mdpsfb1sivqmwr6xnfqkllcnpabdbk3"; depends=[]; }; Rcpp11 = derive2 { name="Rcpp11"; version="3.1.2.0"; sha256="1x6n1z7kizagr5ymvbwqb7nyn3lca4d4m0ks33zhcn9gay6g0fac"; depends=[]; }; - RcppAPT = derive2 { name="RcppAPT"; version="0.0.4"; sha256="0xbaamv3bg08ymbmiq6kwh86p17y6qzgydq02syig2a3ykp0042c"; depends=[Rcpp]; }; - RcppAlgos = derive2 { name="RcppAlgos"; version="2.0.3"; sha256="0m1hj249hyn6vwhqn2jismqkd07glk7nxqxwpq81rph9wp50ji0a"; depends=[Rcpp]; }; + RcppAPT = derive2 { name="RcppAPT"; version="0.0.5"; sha256="0188sabgfmgh83yr3hmqpg5cmhllfkxzbxxchqr2r2fmj6x0ib1a"; depends=[Rcpp]; }; + RcppAlgos = derive2 { name="RcppAlgos"; version="2.2.0"; sha256="0sq482qzg3xa52ny2xfvj4vrrfnk0qng4fqmw5jfaqr806r7sbrp"; depends=[gmp Rcpp]; }; RcppAnnoy = derive2 { name="RcppAnnoy"; version="0.0.10"; sha256="08s86ak26zybawry6l6l30k1lakc71k2j58539h70dnrmsd15jna"; depends=[Rcpp]; }; - RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.8.600.0.0"; sha256="15wqk6lnaxf6az9ccvmzpx6pi2cs19ng8j3qvk5zw1niljpp8n3k"; depends=[Rcpp]; }; + RcppArmadillo = derive2 { name="RcppArmadillo"; version="0.9.100.5.0"; sha256="1iyjqhfjip1nxrkllzh7r1m01jjnx7cahqkf3s557w34p987f2l1"; depends=[Rcpp]; }; RcppBDT = derive2 { name="RcppBDT"; version="0.2.3"; sha256="0gnj4gz754l80df7w3d5qn7a57z9kq494n00wp6f7vr8aqgq8wi1"; depends=[BH Rcpp]; }; RcppBlaze = derive2 { name="RcppBlaze"; version="0.2.2"; sha256="0hi7gh7xlmdcyzxsis8wl841d6czbcgb8qdg8y822am1mvc0wmb7"; depends=[BH Matrix Rcpp]; }; - RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.2.3"; sha256="0cb04filbr0mymcg891lc0dw2b3fnjmhn8z50xcilb3v72ccrvqg"; depends=[Rcpp]; }; - RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.9"; sha256="0c6vdrf16f8fyaczzwapzn513wrdklsc8izmzfmfbc58s5500gvk"; depends=[Rcpp]; }; - RcppCWB = derive2 { name="RcppCWB"; version="0.2.4"; sha256="00zgxdakjza8i0wi6zj7lri8ma0pxnsgccm9q16i2nqqndvk4q34"; depends=[Rcpp]; }; - RcppClassic = derive2 { name="RcppClassic"; version="0.9.10"; sha256="1q0vld06dp00d2qdwnnrga4n9abiymqw74zpci2kx813n5z1l0yc"; depends=[Rcpp]; }; + RcppCCTZ = derive2 { name="RcppCCTZ"; version="0.2.5"; sha256="03r7qfhxmn20925yjvqs5cbm255yk4kbrvw16dl2r98argblcmmk"; depends=[Rcpp]; }; + RcppCNPy = derive2 { name="RcppCNPy"; version="0.2.10"; sha256="175bn75akwgz3vcp0n59kiqqz7q9cwkvih241nj8v810cp4gpmkp"; depends=[Rcpp]; }; + RcppCWB = derive2 { name="RcppCWB"; version="0.2.6"; sha256="0vfv9v213v7z3y8rg0kn7w6vwvwxg8gmm2s8h8aa44xfi9q1wia2"; depends=[Rcpp]; }; + RcppClassic = derive2 { name="RcppClassic"; version="0.9.11"; sha256="0aap391fh84342s64v5k43a1vy3cwzg01q3g6ry7mmd2d5h1vv1g"; depends=[Rcpp]; }; RcppClassicExamples = derive2 { name="RcppClassicExamples"; version="0.1.2"; sha256="0dr2104miy7psr73nicfs84652ai0d5liw6wxcwyrx7fmys3p638"; depends=[Rcpp RcppClassic]; }; RcppDE = derive2 { name="RcppDE"; version="0.1.6"; sha256="1i9jj595nqpb16y22z2b8fcf0gq1fg0pbiisbd837p1cyw4nff69"; depends=[Rcpp RcppArmadillo]; }; RcppDL = derive2 { name="RcppDL"; version="0.0.5"; sha256="1gii00bna6k9byaax7gsx42dv1jjnkrp4clbmdq59ybq3vkvw8z2"; depends=[Rcpp]; }; + RcppDist = derive2 { name="RcppDist"; version="0.1.1"; sha256="02g57xwfipdcljv06krhm02dbqn9kfyj2km6rdg0a7vq9prwdz1x"; depends=[Rcpp RcppArmadillo]; }; RcppEigen = derive2 { name="RcppEigen"; version="0.3.3.4.0"; sha256="1m6ssq6lvi36ggf26y4hhq996583pxxdb978jnn1x6r9gdb0q0hi"; depends=[Matrix Rcpp]; }; RcppEigenAD = derive2 { name="RcppEigenAD"; version="1.0.0"; sha256="18zm9hsfqwiicxsdm87ix3qc261ljxxn2s736p6aayx82b6vwkz6"; depends=[BH functional memoise Rcpp RcppEigen Rdpack readr]; }; RcppExamples = derive2 { name="RcppExamples"; version="0.1.8"; sha256="15iw2vx6ygb03siq743418whhqvfrxk2i4nqn7p9yg1m3jwafxna"; depends=[Rcpp]; }; @@ -3178,38 +3308,39 @@ in with self; { RcppMLPACK = derive2 { name="RcppMLPACK"; version="1.0.10-6"; sha256="0vjx6azp3sny6nv5k1cs6vk61hmbllqw8mgvi7zn15p7ilmhsyyi"; depends=[BH Rcpp RcppArmadillo]; }; RcppMeCab = derive2 { name="RcppMeCab"; version="0.0.1.2"; sha256="0varavfbrqzma176rw0dr9v5chh7pxh5y9g0rs3v7hqnlghp22y2"; depends=[BH Rcpp RcppParallel]; }; RcppMsgPack = derive2 { name="RcppMsgPack"; version="0.2.2"; sha256="0118ajmgl8gdc1cd47x0pnp4qglszc3j3izw98m6y2gkm3rnkzad"; depends=[BH Rcpp]; }; + RcppNLoptExample = derive2 { name="RcppNLoptExample"; version="0.0.1"; sha256="1fml6hpa12q0lgg5fg6fi9lz6mckwh345pbh95mld2qagzvmg01n"; depends=[nloptr Rcpp]; }; RcppNumerical = derive2 { name="RcppNumerical"; version="0.3-2"; sha256="0j0hvwsbidahk2zx3zk7fhc6m9cca27iq3ivx7vdvggz8iqzszrz"; depends=[Rcpp RcppEigen]; }; - RcppParallel = derive2 { name="RcppParallel"; version="4.4.0"; sha256="1gjqmkzsi1fi0vss1nvq6i77j3aixdxd047mw9vf4l60z2ypr3h1"; depends=[BH]; }; + RcppParallel = derive2 { name="RcppParallel"; version="4.4.1"; sha256="1y37bpn6ifvlh8ilp78qx518dmal6s0lc16gk029hvy1rdlkr2ga"; depends=[BH]; }; RcppProgress = derive2 { name="RcppProgress"; version="0.4.1"; sha256="0yk01hfv961zyp569682k9igvhnwqyg5j0n5fm63sxigj82l2xhi"; depends=[]; }; RcppQuantuccia = derive2 { name="RcppQuantuccia"; version="0.0.2"; sha256="1si5njb8g4g6fjrkqbp3y6z23yxs901nq9kmiwwbqs8di6svc5q3"; depends=[BH Rcpp]; }; - RcppRedis = derive2 { name="RcppRedis"; version="0.1.8"; sha256="05c4c65ayiqyzmkj2mrgwwflgjk54rf9nmb3rhickj16yy9b071q"; depends=[BH RApiSerialize Rcpp]; }; + RcppRedis = derive2 { name="RcppRedis"; version="0.1.9"; sha256="08c2c5d3rn3z89yhlymbr8w145y85hlz1bq3g6kz0kwkjfnkbs1x"; depends=[BH RApiSerialize Rcpp]; }; RcppRoll = derive2 { name="RcppRoll"; version="0.3.0"; sha256="0srzfhzkk42kzrdjnhbb37946jp1p688rgysy6k3i2is8jb21zyb"; depends=[Rcpp]; }; RcppSMC = derive2 { name="RcppSMC"; version="0.2.1"; sha256="0k2k1pj05i6hf7gpar3r4mbv9cs04bd4v657saq9vhy30300vg49"; depends=[Rcpp RcppArmadillo]; }; RcppStreams = derive2 { name="RcppStreams"; version="0.1.1"; sha256="0sa0ndnfm89f8lh3ba6jf3gxaan1g97dhlzbmpkwqj22frgggqjw"; depends=[BH Rcpp]; }; RcppTN = derive2 { name="RcppTN"; version="0.2-2"; sha256="0m2wc5n1fzxv56s4gqqnygb24dbadgrpgjm4bs4hr6qazgjapymf"; depends=[Rcpp]; }; - RcppTOML = derive2 { name="RcppTOML"; version="0.1.3"; sha256="0krw4104m8drgyf53aq22kl5q0abrd0y4j1fvrwsj1dkbkybas05"; depends=[Rcpp]; }; + RcppTOML = derive2 { name="RcppTOML"; version="0.1.4"; sha256="0pr941ljn5wc2cjinw8qbqv0x7aw1ssglfidy030v2rhnnv8s762"; depends=[Rcpp]; }; RcppThread = derive2 { name="RcppThread"; version="0.4.0"; sha256="0snrs66r19zha43xqkgcz1r15f7x8ifg1vyi0d7j175bkmin2jlb"; depends=[Rcpp]; }; RcppXPtrUtils = derive2 { name="RcppXPtrUtils"; version="0.1.0"; sha256="0833j7hy7dpdxkj1m5cfyxzpp7j0n7mxjc5kx32mdn5s43iaf7yh"; depends=[Rcpp]; }; RcppXts = derive2 { name="RcppXts"; version="0.0.4"; sha256="143rhz97qh8sbr6p2fqzxz4cgigwprbqrizxpkjxyhq8347g8p4i"; depends=[Rcpp xts]; }; RcppZiggurat = derive2 { name="RcppZiggurat"; version="0.1.5"; sha256="0zmr3nvm5j0fpwxk3x9kxpwqbr66ldfvd10zy8xlgjbslz9myvfv"; depends=[Rcpp RcppGSL]; }; - Rcrawler = derive2 { name="Rcrawler"; version="0.1.7-0"; sha256="0r8s3d4dby9vn0qc5lbhab4vh3yl5yifi7ipxafsgffdxislnsdw"; depends=[data_table doParallel foreach httr selectr xml2]; }; + Rcrawler = derive2 { name="Rcrawler"; version="0.1.8-0"; sha256="03fp1yi8363zwzbzbw1v763r0d65352pp2wzfk6yq8f5h6jhiaxr"; depends=[data_table doParallel foreach httr selectr xml2]; }; Rcriticor = derive2 { name="Rcriticor"; version="2.0"; sha256="1cnmmcdp2g3syrlld1pm7101cbzxh02cpvqvgsj7mp6zxm2k5plv"; depends=[]; }; Rcsdp = derive2 { name="Rcsdp"; version="0.1.55"; sha256="1sskjf2vv5alnwirz676d8yphzk2a69wkghhkpxb8my1rjlfdgaw"; depends=[]; }; Rcssplot = derive2 { name="Rcssplot"; version="0.3.0"; sha256="1qwrwzyqbwwwjf2zx6712q6wj629vf9rjrgscf0fim10fa6k5grn"; depends=[]; }; Rd2md = derive2 { name="Rd2md"; version="0.0.2"; sha256="07j1nnsk5nyl8kvgvh9f684g6bhc01jiq1fcmq2pnpx57jdzfbpi"; depends=[knitr]; }; - Rd2roxygen = derive2 { name="Rd2roxygen"; version="1.6.2"; sha256="1hkqy97mh68yzkh4bawjrgf1rlhkh3jz2ky84rg3wgz1mkvrrsx2"; depends=[formatR roxygen2]; }; + Rd2roxygen = derive2 { name="Rd2roxygen"; version="1.7"; sha256="0rfhhqibgxapbc9jrv08fnm3p5fqkhj7s9yj7kbcck0lygy1kpx4"; depends=[formatR roxygen2]; }; Rdice = derive2 { name="Rdice"; version="1.0.0"; sha256="1xibvm690808p2g3jch7rh1825yrpgln2hjfclgxjwn822qvs4xr"; depends=[data_table]; }; - Rdimtools = derive2 { name="Rdimtools"; version="0.3.2"; sha256="0wk6sv2ahxscy4nsk826c9rlq8vxgnflg9banwdxhs6qlqhipnlb"; depends=[ADMM CVXR Matrix Rcpp RcppArmadillo Rcsdp Rdpack RSpectra Rtsne]; }; - Rdistance = derive2 { name="Rdistance"; version="1.3.2"; sha256="1ajmr58lgc74727jiydfrh4j6ra7vq8hp8nm3l2s3g2mc8n1mqk5"; depends=[]; }; - Rdpack = derive2 { name="Rdpack"; version="0.8-0"; sha256="0r4mcg7mqb7h0c6pn0vh622vw7kvdpmy51qvhgf753yywfznkwq6"; depends=[bibtex gbRd]; }; - Rdrools = derive2 { name="Rdrools"; version="1.0.3"; sha256="1y805j2xrv8kgh42s5lig07mb76fcz5yrxal0zaykj16cvid8287"; depends=[Rdroolsjars rJava]; }; + Rdimtools = derive2 { name="Rdimtools"; version="0.4.0"; sha256="0wlzzhs9a154r2p06zwn6pgvpall7gp56z6a2ish9gyb9152gsij"; depends=[ADMM CVXR Matrix Rcpp RcppArmadillo RcppDE Rcsdp Rdpack RSpectra Rtsne]; }; + Rdistance = derive2 { name="Rdistance"; version="2.1.2"; sha256="1c9vil4pjd49jmcv7vib98dv31gh794zcxhm30nbv8kx8n16xi0f"; depends=[]; }; + Rdpack = derive2 { name="Rdpack"; version="0.10-1"; sha256="0bbjnw88h54v40hzim00i8yd3p4rk9i84zfdmgcbnylscwvsf0av"; depends=[bibtex gbRd]; }; + Rdrools = derive2 { name="Rdrools"; version="1.1.0"; sha256="0my2x5cwfnds0hjc03363l1ydfk5kch9bv8mj0hgwkjs4b7szw8r"; depends=[dplyr magrittr purrr Rdroolsjars rJava rlang tibble]; }; Rdroolsjars = derive2 { name="Rdroolsjars"; version="1.0.1"; sha256="1l9bc1bwpj10irr973hzkhr04i1f3g998n8hcl2k2i9kgv1naqmz"; depends=[rJava]; }; Rdsdp = derive2 { name="Rdsdp"; version="1.0.4-2"; sha256="05bk6yqvhzvyfzga1dz34w68nlwl2dc8bvhh3ghd07a61fsnkg4x"; depends=[]; }; Rdsm = derive2 { name="Rdsm"; version="2.1.1"; sha256="07fc6c2hv0vvg15va552y54cla1mrqsd75w3zh02vc7yd226l4rj"; depends=[bigmemory]; }; Rdtq = derive2 { name="Rdtq"; version="0.1"; sha256="114pyf95nl132014ygn84xi41c2zf1ii2wfgd1acwnnmfzvdw24s"; depends=[Matrix Rcpp]; }; Rduino = derive2 { name="Rduino"; version="0.1"; sha256="0r1yy3a2n8a4niasfjn77gv130a062i802r7xhbg0abljv5m6ra5"; depends=[serial]; }; ReCiPa = derive2 { name="ReCiPa"; version="3.0"; sha256="019vlvgxnqqlwghxygfqggzp2b4x2pqzdrbhaa703zdhm58k0n1g"; depends=[]; }; - ReIns = derive2 { name="ReIns"; version="1.0.7"; sha256="1r28wyb7yh5aymlnd3yxkqmn4lnfnipfsnpbgl71zql763fchwlg"; depends=[doParallel foreach Rcpp survival]; }; + ReIns = derive2 { name="ReIns"; version="1.0.8"; sha256="1piwmjav32cwki3jhxzv3ld59gddlm5y5dwc8smwk5gzpfypdzm6"; depends=[doParallel foreach Rcpp survival]; }; ReacTran = derive2 { name="ReacTran"; version="1.4.3.1"; sha256="05c9jfvj134gy3by7m3r1fbar0m39vaydr7d2py9cakzs44fqfpj"; depends=[deSolve rootSolve shape]; }; RealVAMS = derive2 { name="RealVAMS"; version="0.4-1"; sha256="13x8yryl5vp3rn6n2hd14ng6cgr3bxkps4y1vanimbwv4faa8116"; depends=[Matrix numDeriv Rcpp RcppArmadillo]; }; Rearrangement = derive2 { name="Rearrangement"; version="2.1"; sha256="0q253nj62rl65vjsq6503r80qa2j35wac8lv7ydp9w260p28z923"; depends=[quantreg]; }; @@ -3235,16 +3366,15 @@ in with self; { RepeatedHighDim = derive2 { name="RepeatedHighDim"; version="2.0.0"; sha256="1n9w4jb25pm0mmsahlfhkp9jmhgp5b21l1g85gm2wbxqkjsg7g0g"; depends=[MASS nlme]; }; Replicate = derive2 { name="Replicate"; version="1.0.1"; sha256="110pvissyv3dx1wpwpngcg18mpmpml49gcmdykip55s1d3ljf791"; depends=[metafor]; }; RepoGenerator = derive2 { name="RepoGenerator"; version="0.0.1"; sha256="0d6s2sqyycaqrg32xdkp3pr5i7qmvwrfrjcd7f94a9y3lz4bz5b5"; depends=[git2r httr rmarkdown rstudioapi]; }; - ReporteRs = derive2 { name="ReporteRs"; version="0.8.10"; sha256="18ivgd3736zcrimcyzfkh5d6h9s1srh7xdz597y596dsssx1lmc6"; depends=[gdtools htmltools knitr png R_utils ReporteRsjars rJava rvg shiny xml2]; }; - ReporteRsjars = derive2 { name="ReporteRsjars"; version="0.0.4"; sha256="0q11jcbkv9ibmkqr3mka0w5d797s8xb0155kcs5inlcacirp6wvy"; depends=[rJava]; }; ResistorArray = derive2 { name="ResistorArray"; version="1.0-28"; sha256="055zr4rybgrvg3wsgd9vhyjpvzdskrlss68r0g7rnj4yxkix0kxz"; depends=[]; }; ResourceSelection = derive2 { name="ResourceSelection"; version="0.3-2"; sha256="08b1aa3183k1y30dwabnd6x353mdp2sn5b908cpv84bs3fdzlrdp"; depends=[MASS Matrix pbapply]; }; RevEcoR = derive2 { name="RevEcoR"; version="0.99.3"; sha256="1nym263ynjdir5kxv35jnmki9mshlplq0sk3xnjd4ac6f1cfbfqj"; depends=[gtools igraph magrittr Matrix plyr purrr stringr XML]; }; Rexperigen = derive2 { name="Rexperigen"; version="0.2.1"; sha256="158ksnd1gvzq7ii0ys2v0wrfnr001hni0i8m77p1fn1arixgmqdw"; depends=[digest jsonlite RCurl]; }; Rfacebook = derive2 { name="Rfacebook"; version="0.6.15"; sha256="0hp2mbm0hnyasizszvh5x9hv7z2q633zck1a1gvk36nbxb1shx7c"; depends=[httpuv httr rjson]; }; - Rfast = derive2 { name="Rfast"; version="1.9.0"; sha256="1v43vakp3bqka4k295imyl95f3hkvnpkbwj61gbm37yxamxvx0s4"; depends=[Rcpp RcppArmadillo RcppZiggurat]; }; + Rfast = derive2 { name="Rfast"; version="1.9.1"; sha256="1kd0ifiw5dd2rl6n5dq9i3bfr0f5r8pxfz8j1sxazf3xsq0zpini"; depends=[Rcpp RcppArmadillo RcppZiggurat]; }; Rfit = derive2 { name="Rfit"; version="0.23.0"; sha256="1gxxipbh7mskrqwrpk1gf1dn8mp3l1v4hgmzii44bppffnxs7slp"; depends=[]; }; Rfmtool = derive2 { name="Rfmtool"; version="3.0.0"; sha256="0hjy66b7d9xp4d8fzhs5zizvwlrdrmlmba2wf9fjraz5ysg0vnxv"; depends=[]; }; + Rfolding = derive2 { name="Rfolding"; version="1.0"; sha256="15lf73zxr1slin9faj9k0z8qkb1g9nb7h080nfv99gsi2ks68ssg"; depends=[]; }; Rga4gh = derive2 { name="Rga4gh"; version="0.1.1"; sha256="0h5y722blkkwn6ask6vjnhl22v9l6511chdm50ig6xcs5dvjam2m"; depends=[httr jsonlite]; }; Rgb = derive2 { name="Rgb"; version="1.6.1"; sha256="0qs3dlv4g45dqphqjm23ky3w6rxh8ff2q6b17kvf57skyf1b1yn8"; depends=[]; }; Rgbp = derive2 { name="Rgbp"; version="1.1.3"; sha256="1340h5rzb4631h6aanrdjl4x4l0h6l5x61qqmckrdf08fw2625lp"; depends=[mnormt sn]; }; @@ -3252,15 +3382,15 @@ in with self; { Rgnuplot = derive2 { name="Rgnuplot"; version="1.0.3"; sha256="0mwpq6ibfv014fgdfsh3wf8yy82nzva6cgb3zifn3k9lnr3h2fj7"; depends=[]; }; RgoogleMaps = derive2 { name="RgoogleMaps"; version="1.4.2"; sha256="112mdm53qx92n2m4ms02sbppckp44l1z19vy99j6gw3jrdprjydl"; depends=[png]; }; Rgretl = derive2 { name="Rgretl"; version="0.2.2"; sha256="18jyp4bxs96ri1a4ifd52aj0q6kd2dygz8pkajbd9whq7bn5ick6"; depends=[lubridate png xml2]; }; - Rhpc = derive2 { name="Rhpc"; version="0.18-185"; sha256="1clw2afvqx8bdz8f5fzqs0ybh95afp5n178hspp36awab34fpd9p"; depends=[]; }; - RhpcBLASctl = derive2 { name="RhpcBLASctl"; version="0.18-185"; sha256="0s950rildshsnfny6kxfw3jls4i50rfmzbg1zma4ilbwswzp7kpq"; depends=[]; }; + Rhpc = derive2 { name="Rhpc"; version="0.18-204"; sha256="0ja2cx6sa8ihxnq96qhxfp43z5zd45b8jfb0y2rzzklnd7kj9kl1"; depends=[]; }; + RhpcBLASctl = derive2 { name="RhpcBLASctl"; version="0.18-205"; sha256="1ls2286fvrp1g7p8v4l6axznychh3qndranfpzqz806cm9ml1cdp"; depends=[]; }; Ricetl = derive2 { name="Ricetl"; version="0.2.5"; sha256="0q87cxzqkkp2bk92q3wnxxsqlkafkd37lp5pki7f87a5vcxlcrak"; depends=[devtools gWidgets gWidgetsRGtk2 plyr readr readxl stringr tidyverse writexl]; }; RidgeFusion = derive2 { name="RidgeFusion"; version="1.0-3"; sha256="10llmrsfpcqrkcbw7zj44kvfy7ywn9rk49n7zplilz8h94zzcmjv"; depends=[mvtnorm]; }; Ridit = derive2 { name="Ridit"; version="1.1"; sha256="02cni6hzf1bsns7vi8vklnhc0pfb5vwqhjnnfnjnnaxpzpsbvdfn"; depends=[]; }; Rilostat = derive2 { name="Rilostat"; version="0.2.1"; sha256="058qz5kn7p8wn3lvw92c11cqpkz9brgf1igmawfkb0lqvj366vyd"; depends=[data_table dplyr DT haven plyr RCurl readr stringr tibble xml2]; }; Rip46 = derive2 { name="Rip46"; version="1.0.2"; sha256="0wfp6fm5mgmjqjkn0c5hvjd95yn4zcv0s8xc5294qf5jqxp8b1w7"; depends=[Rcpp]; }; Risk = derive2 { name="Risk"; version="1.0"; sha256="1i42xcc699syj108mvgklwb30wkf9c9jrg5rmd2ypnqk9mnyg2fg"; depends=[]; }; - RiskPortfolios = derive2 { name="RiskPortfolios"; version="2.1.1"; sha256="1kn0vb4nhm3bxlmk5y2nl5m7a7hdvz3nz0yp8rdigpl6b2dp79w1"; depends=[MASS nloptr quadprog]; }; + RiskPortfolios = derive2 { name="RiskPortfolios"; version="2.1.2"; sha256="10kgr05npq9gyhglvpzk49hsr44rgscnygkv3b0gz7f6jxqkfj9z"; depends=[MASS nloptr quadprog]; }; Ritc = derive2 { name="Ritc"; version="1.0.2"; sha256="03smhxjhjfkc9pxhlgg54b6v2jznpmnws8373qpvn9a9ky5bcq2l"; depends=[minpack_lm]; }; RiverBuilder = derive2 { name="RiverBuilder"; version="0.1.1"; sha256="06cd1m4liv2bsh2sxplq2zl45g9zq8gsgvh14d0zr0pqm8z4dsyw"; depends=[]; }; Rivivc = derive2 { name="Rivivc"; version="0.9"; sha256="0gl3040pp9nqm4g2ympnx80z64zfnn1hfsxka8ynd2cqhjn3b5i1"; depends=[signal]; }; @@ -3268,11 +3398,13 @@ in with self; { RkMetrics = derive2 { name="RkMetrics"; version="1.3"; sha256="1k6vnr1r4h69iznib638z45gd0f8wc4g4h0ji9f0017883g77li1"; depends=[]; }; Rknots = derive2 { name="Rknots"; version="1.3.2"; sha256="1krhma8hy3l5lbm6d8rxjlj9jw1zrd16h4wy4p1clfa5vlhh3bwi"; depends=[bio3d rgl rSymPy]; }; Rlab = derive2 { name="Rlab"; version="2.15.1"; sha256="1pb0pj84i1s4ckdmcglqxa8brhjha4y4rfm9x0na15n7d9lzi9ag"; depends=[]; }; - Rlabkey = derive2 { name="Rlabkey"; version="2.2.1"; sha256="1nsaab7nysld1gdqnpxd9g68vzs363szyinbfn6j2c7ch0vqcrka"; depends=[httr Rcpp rjson]; }; + Rlabkey = derive2 { name="Rlabkey"; version="2.2.3"; sha256="02srz4726qkc0700fzdk4mk88dl8m84b0ysyrim19jq7yyhx3da0"; depends=[httr jsonlite Rcpp]; }; + Rlda = derive2 { name="Rlda"; version="0.2.5"; sha256="1wv5n1r7m9jimmv4dcih967hy6lmmgmywvch716rqdpayngp399h"; depends=[coda doParallel foreach gtools Rcpp RcppArmadillo RcppProgress]; }; Rlibeemd = derive2 { name="Rlibeemd"; version="1.4.0"; sha256="0nnkblrgycvfwn0lb9j92f5wpln69kk54z4irwi35rrfl31f689m"; depends=[Rcpp]; }; Rlinkedin = derive2 { name="Rlinkedin"; version="0.2"; sha256="15sbiis1d0s466nqk1adjhflb01sb9kn25f4y6sagkdggvyz6b56"; depends=[httpuv httr XML]; }; - Rlinsolve = derive2 { name="Rlinsolve"; version="0.2.0"; sha256="08ib0jjqicscn4mx5yv25q0x66iycx8jhazvjb47nqvn24mirprp"; depends=[BH bigmemory Matrix Rcpp RcppArmadillo Rdpack]; }; + Rlinsolve = derive2 { name="Rlinsolve"; version="0.3.0"; sha256="1kvlpfrw4w2dykpdym9sg6h2ghavnm7lwxn6bzqldwg53wlinvxk"; depends=[BH bigmemory Matrix Rcpp RcppArmadillo Rdpack]; }; Rlof = derive2 { name="Rlof"; version="1.1.1"; sha256="1px6ax2mr2agbhv41akccrjdrvp8a9lmhymp0cn8fjrib0ig8vql"; depends=[doParallel foreach]; }; + Rmagic = derive2 { name="Rmagic"; version="1.3.0"; sha256="13ai04py36lzppa4jswxvmsmm5j83afv17viiik5yglwjr9rbinj"; depends=[ggplot2 Matrix reticulate]; }; Rmalschains = derive2 { name="Rmalschains"; version="0.2-4"; sha256="1rzslwwp6ikp3zky2zlqylsd8nmhv13iz2h87kwxfkh3611x28yk"; depends=[Rcpp]; }; RmarineHeatWaves = derive2 { name="RmarineHeatWaves"; version="0.17.0"; sha256="09lrrxnkkfnbidnmag1czx2xzssdl09348nkc6pqgq6xz36a3mqc"; depends=[dplyr ggplot2 lazyeval lubridate plyr raster rlang tibble tidyr zoo]; }; RmecabKo = derive2 { name="RmecabKo"; version="0.1.6.2"; sha256="1i08wlfd14wmvwrsvjyhgzxkwzfp4jiwbzymw8m25pvyjxgi7jmy"; depends=[Rcpp stringr]; }; @@ -3280,28 +3412,30 @@ in with self; { Rmixmod = derive2 { name="Rmixmod"; version="2.1.2"; sha256="06d8iwnjd9n4rfmcsnqzhi5ai0rxlc1qwij5s7ixkncq8c402a2k"; depends=[Rcpp RcppEigen]; }; RmixmodCombi = derive2 { name="RmixmodCombi"; version="1.0"; sha256="0cwcyclq143938wby0aj265xyib6gbca1br3x09ijliaj3pjgdqi"; depends=[Rcpp Rmixmod]; }; Rmosek = derive2 { name="Rmosek"; version="1.2.5.1"; sha256="0zggv699s93i9g98qjs4ci2nprgfkzq45lpzgrbhldsxiflf27gz"; depends=[Matrix]; }; - Rmpfr = derive2 { name="Rmpfr"; version="0.7-0"; sha256="0jpj3nl76jd6vc2p1xwr8jl62q8ckwsdaxqnk9b20srkq63mfrig"; depends=[gmp]; }; + Rmpfr = derive2 { name="Rmpfr"; version="0.7-1"; sha256="0172px5ryi7i0gyyin9z2bzif8vnj292gk0s1w5p3c12g9hj2c4v"; depends=[gmp]; }; Rmpi = derive2 { name="Rmpi"; version="0.6-7"; sha256="1b62gs7w1xqadqd7ir41jnxlcf14gcqfxd0915kn9ckdlsdrh0sw"; depends=[]; }; RnavGraphImageData = derive2 { name="RnavGraphImageData"; version="0.0.4"; sha256="1k1gnkghap878fck0bbz9mm0fr4cli6lh1d11r0cf47fvl6cc4gr"; depends=[]; }; - RndTexExams = derive2 { name="RndTexExams"; version="1.4.1"; sha256="1gi96hfd7dkvmbvy6hj25g1l7nwk4yhxkdjx1l3ws3c2zpi27cvj"; depends=[CopyDetect data_table stringi stringr]; }; - Rnets = derive2 { name="Rnets"; version="0.9.8"; sha256="0lcgapspl7ndrf3gxkrsv1172f2sv2587zaa1q6b950zympcvcj3"; depends=[data_table glasso igraph]; }; - Rnightlights = derive2 { name="Rnightlights"; version="0.2.1"; sha256="07fd49i0cybnr5d14qf7d9p95frw8qjslrx9y2bwdrx89fvp0gk8"; depends=[cleangeo data_table doSNOW dplyr ff ffbase foreach gdalUtils lubridate R_utils raster readr reshape2 rgdal rgeos rvest rworldmap settings snow sp stringr xml2]; }; + RndTexExams = derive2 { name="RndTexExams"; version="1.5"; sha256="17azzxcawqqvfdbw1i34n03bj5yla8npyi7xh3pnx22xb7sbwq3x"; depends=[data_table stringi stringr]; }; + Rnets = derive2 { name="Rnets"; version="1.0.2"; sha256="1mym5zd7717mq6dlnv9b3qry7cfa5ylp3h596dbnnq5b1rhbbfis"; depends=[data_table glasso igraph rlang stringr]; }; + Rnightlights = derive2 { name="Rnightlights"; version="0.2.3"; sha256="014bw1xln699y0zjaf5xifc2f3yl9zgb0acv7v1qw0q478ka9aak"; depends=[cleangeo data_table doSNOW dplyr ff ffbase foreach lubridate R_utils raster readr reshape2 rgdal rgeos rvest rworldmap settings snow sp stringr xml2]; }; + Rnmr1D = derive2 { name="Rnmr1D"; version="1.2.1"; sha256="1lwkswg2jr5qwxzcx8g91m63caij85p7yx3kk8w75i8v0j8iac10"; depends=[base64enc doParallel foreach igraph impute MASS MassSpecWavelet Matrix ptw Rcpp signal speaq XML]; }; Rnumerai = derive2 { name="Rnumerai"; version="0.3"; sha256="0zvfp9zp73gm6pflf9bx1xk1s45xwwvcd56cbris08d2zfj3b3nl"; depends=[httr lubridate]; }; - RobAStBase = derive2 { name="RobAStBase"; version="1.0.2"; sha256="10bbv9jjh6zznkzrlkx7dahahicab8ld11ah1mar2kz09bdz3kih"; depends=[distr distrEx distrMod RandVar rrcov startupmsg]; }; - RobAStRDA = derive2 { name="RobAStRDA"; version="1.0.2"; sha256="1lyp2y38jnwv8ggrv9pdzprpf2gs62w1mpzwcqcbrmy7fzjsym0b"; depends=[]; }; - RobLox = derive2 { name="RobLox"; version="1.0"; sha256="0y193xai0mfwpm6zhxgy21h4yrlqrpvwx84bj4xnr8ql87wznh7q"; depends=[Biobase distr distrMod lattice RandVar RColorBrewer RobAStBase]; }; - RobLoxBioC = derive2 { name="RobLoxBioC"; version="0.9"; sha256="0ia7vn8x8whyp8kl7mpwd6fd0yv0y3pb1mppnh2329x7xdvcs5j4"; depends=[affy beadarray Biobase BiocGenerics distr lattice RColorBrewer RobLox]; }; + RobAStBase = derive2 { name="RobAStBase"; version="1.1.0"; sha256="1szxlqgm913fsgi4i7ccnv2rcj81bssl62ahh0g0818dx7zzblxb"; depends=[distr distrEx distrMod RandVar rrcov startupmsg]; }; + RobAStRDA = derive2 { name="RobAStRDA"; version="1.1.0"; sha256="0hna14757g372ysyyb47529j1q0796k6nzf3lw4ba7ryjcydzw2v"; depends=[]; }; + RobExtremes = derive2 { name="RobExtremes"; version="1.1.0"; sha256="10b8jbsdnw0zyvx8yjx775mcy64bfqqafy2sw4lfcji1sz3xqjxl"; depends=[actuar distr distrEx distrMod evd RandVar RobAStBase RobAStRDA robustbase ROptEst startupmsg]; }; + RobLox = derive2 { name="RobLox"; version="1.1.0"; sha256="14k8xkxrw1ji1sbw49mxh6n0rpgqzn68srh5ch6k1i4nc5c6zmr5"; depends=[Biobase distr distrMod lattice RandVar RColorBrewer RobAStBase]; }; + RobLoxBioC = derive2 { name="RobLoxBioC"; version="1.1.0"; sha256="17yp0jwibf839nwyfaxiz46ckgljssl9gzhhz89a7d12fyfhbb3p"; depends=[affy AnnotationDbi beadarray Biobase BiocGenerics distr distrMod lattice RColorBrewer RobLox]; }; RobPer = derive2 { name="RobPer"; version="1.2.2"; sha256="0631qfpz61606r50vzn7b3h7arfwxcs8j13q1hg779qx60kwrliy"; depends=[BB quantreg rgenoud robustbase]; }; RobRSVD = derive2 { name="RobRSVD"; version="1.0"; sha256="07z5fw8j5lq7nyxgkvb9i4iwb5inddz2ib4m2bjx6q4c1ricpqz9"; depends=[]; }; - RobRex = derive2 { name="RobRex"; version="0.9"; sha256="0ii539mjq462n1lbnyv3whl8b1agvhvlz31wwyz911gb40isl639"; depends=[ROptRegTS]; }; + RobRex = derive2 { name="RobRex"; version="1.1.0"; sha256="0nszr0dnk8v7raa8sk9zcs4a5xwjv7qzhzsryach777nr9vcdafh"; depends=[distr RandVar RobAStBase ROptRegTS]; }; Robocoap = derive2 { name="Robocoap"; version="0.1-1"; sha256="0aj6iv85a1zfaknjhrzf6lnf0qn726dvnj4dywg9nii1kkqrkq2w"; depends=[data_table igraph markovchain tm]; }; RobustAFT = derive2 { name="RobustAFT"; version="1.4-3"; sha256="0x7sn2y9s6nwzlj8476irv893crwag6v4k7w3w589k33kkz5n2hp"; depends=[robustbase survival]; }; RobustCalibration = derive2 { name="RobustCalibration"; version="0.5.1"; sha256="0wsnvryvrl37acljrda2dm1d8aynqiy66yd2i857m035whixfpqa"; depends=[Rcpp RcppEigen RobustGaSP]; }; - RobustGaSP = derive2 { name="RobustGaSP"; version="0.5.5"; sha256="0asxhzybpfmz3zzhr32hvcxrdmdsjlqjvxiihrxc8f4w3qwnzb82"; depends=[Rcpp RcppEigen]; }; + RobustGaSP = derive2 { name="RobustGaSP"; version="0.5.6"; sha256="0lrdsxg1b8pb1blf0pmla18jykjlzflrmgi7g8kccrgv725clifd"; depends=[Rcpp RcppEigen]; }; RobustRankAggreg = derive2 { name="RobustRankAggreg"; version="1.1"; sha256="1pslqyr1lji1zvcrwyax4zg2s81p1jnhfldz8mdfhsp5y7v8iar3"; depends=[]; }; RockFab = derive2 { name="RockFab"; version="1.2"; sha256="1b5mhfll5vmqwl4pblmclyx9604vn07jyza02rm0jcsx915ms8sc"; depends=[EBImage rgl]; }; - Rodam = derive2 { name="Rodam"; version="0.1.3"; sha256="0cfqrvvwkz4marmkxxl2ihi5gdbmr51q2r0sk1lkppa5drdh8cb5"; depends=[RCurl]; }; - RonFHIR = derive2 { name="RonFHIR"; version="0.2.0"; sha256="1kcbv8ibqh7jb3dpj4p73vd168c6vlwi08s9cshl4w6hqbz1pklg"; depends=[httr jsonlite R6]; }; + Rodam = derive2 { name="Rodam"; version="0.1.4"; sha256="0vqhzy6gajkqh0pdckyc6cpxm97jb6bmw2vpcd0fi622fh63r0nl"; depends=[RCurl]; }; + RonFHIR = derive2 { name="RonFHIR"; version="0.3.0"; sha256="1fxcaf1zzaahbywvkvafillyqi41ldfa0jdfn6m8hz0wls7b7mz1"; depends=[httr jsonlite R6 stringr]; }; Rook = derive2 { name="Rook"; version="1.1-1"; sha256="00s9a0kr9rwxvlq433daxjk4ji8m0w60hjdprf502msw9kxfrx00"; depends=[brew]; }; RootsExtremaInflections = derive2 { name="RootsExtremaInflections"; version="1.1"; sha256="11wybhw180r4zaqwfs301zwzfzprwwl4hiyhjj78l3mnxgdnmwz7"; depends=[doParallel foreach iterators]; }; Rothermel = derive2 { name="Rothermel"; version="1.2"; sha256="0zrz2ck3q0vg0wpa4528rjlrfnvlyiy0x1gr5z1aax1by7mdj82s"; depends=[ftsa GA]; }; @@ -3311,20 +3445,23 @@ in with self; { RpeakChrom = derive2 { name="RpeakChrom"; version="1.1.0"; sha256="1r8f6knpz83arz2kabizx5yyh1myg0h310qlwh8rmy88cdxi1ps9"; depends=[ggplot2 minpack_lm pracma ptw]; }; Rphylip = derive2 { name="Rphylip"; version="0.1-23"; sha256="0kpqmik4bhr74ib8yvaavr10z4v4w3li5vibdhz7lvz35jfirg9r"; depends=[ape]; }; Rphylopars = derive2 { name="Rphylopars"; version="0.2.9"; sha256="19y0j5vh82sa9jigylxhv0s0hgjyhx3xq4blvk55jhpj8v7iyiky"; depends=[ape doBy geiger MASS Matrix mvnmle phylolm phytools Rcpp RcppArmadillo]; }; - Rpolyhedra = derive2 { name="Rpolyhedra"; version="0.2.5"; sha256="1q24vpbzig7pr7l3nk24vs8qb476l6mcb02v6sjk7md1hrysk34y"; depends=[futile_logger R6 rgl stringr testthat XML]; }; + Rpoet = derive2 { name="Rpoet"; version="1.0.1"; sha256="1a1km5fbzvqwjgky0n31gpafi75s6afyqn0ivh15ikq40a3adir5"; depends=[httr jsonlite stringr]; }; + Rpolyhedra = derive2 { name="Rpolyhedra"; version="0.2.8"; sha256="02zgmhcgawkqmc51m9cmkrawx96d2zqinnif13pqy0hibn94aibb"; depends=[digest futile_logger R6 rgl stringr testthat XML]; }; Rpoppler = derive2 { name="Rpoppler"; version="0.1-0"; sha256="19nvv45ahp0c241p1xzlq0sq5qarqg66jw5f1anhqnfi2hi91hcm"; depends=[]; }; Rprofet = derive2 { name="Rprofet"; version="2.2.0"; sha256="1s0jkq83vfc9jsggnwm31r366b10n6sri2vzpwxybzpjq3d3w5qr"; depends=[binr ClustOfVar ggplot2 gridExtra plyr sqldf stringr]; }; Rquake = derive2 { name="Rquake"; version="2.4-0"; sha256="14s2mjq9qqxfvlwmq9126h67y5wr7irlc7945pgv1ab9hl1lgmz8"; depends=[GEOmap MBA minpack_lm rgl RPMG RSEIS]; }; Rramas = derive2 { name="Rramas"; version="0.1-5"; sha256="0wy0flzp68mikq4v9k5pv6hbzx0w9mpa74dwx79i3iiddn0ylby6"; depends=[diagram]; }; - Rraven = derive2 { name="Rraven"; version="1.0.3"; sha256="076c7qki4whl6hb5918mdyn3iljgvd31c4c4lydbpwx0x0x1lxqn"; depends=[dplyr kableExtra pbapply vegan warbleR]; }; + Rraven = derive2 { name="Rraven"; version="1.0.4"; sha256="1hdq0yqjc4s0bga73px8ybghxyn0xpgvjxmyzkx0js430hyyx84r"; depends=[dplyr kableExtra pbapply warbleR]; }; Rrdrand = derive2 { name="Rrdrand"; version="0.1-16"; sha256="0j9yyvq8r1cgwj3kw1ak6hyazr67f2q0c1m651wdm0wcvm1ajx7f"; depends=[]; }; Rsampletrees = derive2 { name="Rsampletrees"; version="1.0.2"; sha256="1wz3dp1myjkxzf9l5mfli3dfbkc2fwg70xx7m9cxa06vq0a4w5pv"; depends=[ape haplo_stats Rcpp]; }; Rsampling = derive2 { name="Rsampling"; version="0.1.1"; sha256="14rp3j7iaii4rc3jkbijmbgvlagxxqjkz3vvfwwpxix43rsi8zsk"; depends=[]; }; Rserve = derive2 { name="Rserve"; version="1.7-3"; sha256="09rha4p86vak7ss721mwp5bm5ig09xam8zlqv63n9wf36v3kdmpn"; depends=[]; }; RsimMosaic = derive2 { name="RsimMosaic"; version="1.0.3"; sha256="0jlzrs9xxlpazvq3iw8znk0bd00bzlry7bgxsxq7xl23akizj0ji"; depends=[fields jpeg RANN]; }; - Rsmlx = derive2 { name="Rsmlx"; version="1.0.1"; sha256="1vzdzidi0i4gcpdmxcsfi6qh66wk20r9cw5s3y8fqd0nkdjlsagx"; depends=[ggplot2 gridExtra MASS RJSONIO]; }; + Rsmlx = derive2 { name="Rsmlx"; version="1.1.0"; sha256="1ljw8xnzr9asv1vxim86prm8wana6gy72388f273hv36vpr2h3w5"; depends=[ggplot2 gridExtra MASS RJSONIO]; }; Rsolnp = derive2 { name="Rsolnp"; version="1.16"; sha256="0w7nkj6igr0gi7r7jg950lsx7dj6aipgxi6vbjsf5f5yc9h7fhii"; depends=[truncnorm]; }; Rsomoclu = derive2 { name="Rsomoclu"; version="1.7.5.1"; sha256="09dsiic9bfy1yq7bwspidn6w21vff3jay8812abydz1l1fz4qv5i"; depends=[kohonen Rcpp]; }; + Rspc = derive2 { name="Rspc"; version="1.2.2"; sha256="1cnzqpnh009wfs51dc4id9q3giaa8b6dc75b1lhzpwcvw0cxcy4y"; depends=[]; }; + Rspotify = derive2 { name="Rspotify"; version="0.1.2"; sha256="1q8ajjx5ghlgxgch9gifvhi2gmsi0ph8pygwrb9jrd3ijahlw5k4"; depends=[dplyr httr jsonlite magrittr plyr]; }; Rssa = derive2 { name="Rssa"; version="1.0"; sha256="0alh0vq3qqzrn1kklqfp52qknasfq6yzk2dprz3g9pyq05qhmhlw"; depends=[forecast lattice svd]; }; Rsurrogate = derive2 { name="Rsurrogate"; version="2.0"; sha256="1pjyhlxqi8mcbywa7qa1vxgxr5jca0nc9vm1bx53vr231wgnb7gf"; depends=[survival]; }; Rsymphony = derive2 { name="Rsymphony"; version="0.1-28"; sha256="02x54ygbcd2600prcww1l9pb02skn96rj0jdljpky1228jbib4nx"; depends=[]; }; @@ -3334,30 +3471,32 @@ in with self; { Rtsne = derive2 { name="Rtsne"; version="0.13"; sha256="17crbdi80q4g2pwp9v7j3bdaznk96qlrqx01zvj3wwqippizyfqw"; depends=[Rcpp]; }; Rttf2pt1 = derive2 { name="Rttf2pt1"; version="1.3.7"; sha256="12hf9r3mhjr9sawdvf7qhjf1zph2q64f77i81jwvy7awidbm0kja"; depends=[]; }; Rtts = derive2 { name="Rtts"; version="0.3.3"; sha256="0jphdpnpbq0d48kzflilxlh6psk282hi1hz3rmnwnd0rx5iyg624"; depends=[RCurl]; }; - RtutoR = derive2 { name="RtutoR"; version="1.1"; sha256="132vyqkzjzwms9sbw6dmkqqk45si89r0xvy477xl98k14a2q4jlw"; depends=[colourpicker devtools dplyr DT FSelector ggplot2 ggthemes plotly ReporteRs rlang rmarkdown shiny shinyBS shinydashboard shinyjs tidyr]; }; + RtutoR = derive2 { name="RtutoR"; version="1.2"; sha256="19wmi30b5i6zj673d76gxl6j0k3ppfyl5fqrcs0dwmmadrrvbajq"; depends=[colourpicker devtools dplyr DT FSelector ggplot2 ggthemes officer plotly rlang rmarkdown shiny shinyBS shinydashboard shinyjs tidyr]; }; Rtwalk = derive2 { name="Rtwalk"; version="1.8.0"; sha256="0zxf66lsfq8by40flv34xzd5yy0wa1ah9li1d0h7f0yh9nbwhxl5"; depends=[]; }; Ruchardet = derive2 { name="Ruchardet"; version="0.0-3"; sha256="0dgldi6fgp949c3455m9b4q6crqv530jph210xzph41vgw8a2q2v"; depends=[Rcpp]; }; Runiversal = derive2 { name="Runiversal"; version="1.0.2"; sha256="0667mspsjydmxi848c6wsf14gz72bmdj9b3lilma92b7fhqnv7ai"; depends=[]; }; Runuran = derive2 { name="Runuran"; version="0.24"; sha256="1528jzpg0m4gya63xjf7ya4x1c96anm6bpzjgsa1vq1a4dz9m4y9"; depends=[]; }; RunuranGUI = derive2 { name="RunuranGUI"; version="0.3"; sha256="1h2bcc443z8vp4hjf4vss4ds5n6zc6x70kmw13b2431f56jq12fa"; depends=[cairoDevice gWidgets gWidgetsRGtk2 RGtk2 Runuran rvgtest]; }; - Rvcg = derive2 { name="Rvcg"; version="0.17"; sha256="0ssmi8mqmq82qrw0hzrmfqpwnkxwdlfa6j049r4l3gn28cfqhg1j"; depends=[Rcpp RcppArmadillo RcppEigen]; }; + Rvcg = derive2 { name="Rvcg"; version="0.18"; sha256="0a9022ps8cddmblgyzzvfyb77n206dvbv0b7fpnfplis4s68zjkf"; depends=[Rcpp RcppArmadillo RcppEigen]; }; Rvmmin = derive2 { name="Rvmmin"; version="2018-4.17"; sha256="0mhzzwk311wa157l3n4x5x038asvjd81l45g1jclfsjr0smsffym"; depends=[optextras]; }; Rvoterdistance = derive2 { name="Rvoterdistance"; version="1.1"; sha256="16il36hkq1j6gyl5d8bx5khiiv6fy2m8vkhwiaaiqsliw2sspy4j"; depends=[Rcpp]; }; Rwave = derive2 { name="Rwave"; version="2.4-8"; sha256="1rmqwyj2r84sii0vfqhyhpi3n1n1zia2ca627fq9ksvwn110nrvh"; depends=[]; }; + Rwhois = derive2 { name="Rwhois"; version="1.0.3"; sha256="06mx98wi6r265ykkk81hk17yjkym6ar7c2cwp962ijfk3lxwc9l4"; depends=[stringr]; }; Rwinsteps = derive2 { name="Rwinsteps"; version="1.0-1"; sha256="0kzngkan9vydibnr3xm4pyz4v6kz0r4h19f0ngqpri07fkhdsxzd"; depends=[]; }; RxCEcolInf = derive2 { name="RxCEcolInf"; version="0.1-3"; sha256="04d6ffl4qs2vjbk0ibvyq17i2l26qnvxr72s6p3f8q4px33rh4kh"; depends=[lattice MASS MCMCpack mvtnorm]; }; - RxODE = derive2 { name="RxODE"; version="0.7.2-5"; sha256="04irzzv7n7jax1ricdwsmbw0gjn2x4d7cz7hg6y81qhjw4p8qgdi"; depends=[brew cli crayon digest dparser inline magrittr Matrix memoise mvnfast PreciseSums R_utils Rcpp RcppArmadillo rex]; }; + RxODE = derive2 { name="RxODE"; version="0.8.0-8"; sha256="1kwgy39dl8vpg2g7ldalz0i54lcw8568x1rfnvflqk69zz11rdpj"; depends=[brew cli crayon digest dparser inline magrittr Matrix memoise mvnfast n1qn1 PreciseSums R_utils Rcpp RcppArmadillo rex]; }; RxnSim = derive2 { name="RxnSim"; version="1.0.3"; sha256="0fi4aic2brfbl6rsnnfwqq7l8ygvlmr98w0v749l3djpgn7sfrig"; depends=[data_table fingerprint rcdk rJava]; }; - Ryacas = derive2 { name="Ryacas"; version="0.3-1"; sha256="13qvd5gpdrjgzf6isk3529khd02852y3ajmpp5vl8vn9k1jxp86v"; depends=[Rcpp XML]; }; + Ryacas = derive2 { name="Ryacas"; version="0.3-4"; sha256="05y7q6d69nmkgwy1ycw0kqv7hmif5yqsrly3p3psrfsbfvvjl3fj"; depends=[Rcpp xml2]; }; S2sls = derive2 { name="S2sls"; version="0.1"; sha256="0qq1rff2cdgrm5rj69jxgrl71i0wmzyn424fdvcg02zdv9ggqhd3"; depends=[spanel]; }; SACCR = derive2 { name="SACCR"; version="2.1"; sha256="184mw9q25b06zar4ii3na7c4x28ly922d5csfqkw9b07mdp81k3h"; depends=[data_tree jsonlite Trading]; }; SACOBRA = derive2 { name="SACOBRA"; version="0.7"; sha256="12aj4ghs3i3ks749z0l95ipv8gi33xgggkyjf21zvnzmb1dgphys"; depends=[testit]; }; SADEG = derive2 { name="SADEG"; version="1.0.0"; sha256="02ilykbdanx1isbd80c43hqpzkckq6dg40y0rklcnck6v96qky3n"; depends=[]; }; SADISA = derive2 { name="SADISA"; version="1.0"; sha256="0v68k6pwcr2hfsffkcrvpgfwciwir2jsg3q1kvr0ka5iiizpliz3"; depends=[DDD pracma subplex]; }; - SAFD = derive2 { name="SAFD"; version="1.0-1"; sha256="1h9hw66irq2c1ciz502r5h8h9hx32jwhrp9dwl91qlknlj6s1bxr"; depends=[]; }; + SAFD = derive2 { name="SAFD"; version="2.0"; sha256="1ing0zkhl7f9pdcddivp3ii2siaxrrh0al7cdh1r92r4b93kfr70"; depends=[]; }; SALES = derive2 { name="SALES"; version="1.0.0"; sha256="1kjmlwa4v2i7hzm947xby9jr0irsf4c851f7jyqyhqna9c65rx0g"; depends=[Matrix]; }; SALTSampler = derive2 { name="SALTSampler"; version="1.1.0"; sha256="1lh1w5kcx2sqv5czpfypdbq5mw7pxjbdk0vyg23zzjs26ynbdkn9"; depends=[lattice]; }; SAM = derive2 { name="SAM"; version="1.0.5"; sha256="1fki43bp6kan6ls2rd6vrp1mcwvz92wzcr7x6sjirbmr03smcypr"; depends=[]; }; + SAMCpack = derive2 { name="SAMCpack"; version="0.1.1"; sha256="1nnrfc74hd39vnb94lxwfjksmjaz62x0alc2ga46gqyygrrg57g5"; depends=[Rcpp RcppArmadillo RcppXPtrUtils Rdpack]; }; SAMM = derive2 { name="SAMM"; version="0.0.1"; sha256="1yyqci1c0xk5pqi09v3b7p5y0dwbrg1wlsyscfnw6qxwr707y23j"; depends=[Rcpp RcppArmadillo]; }; SAMUR = derive2 { name="SAMUR"; version="0.6"; sha256="0iyv7ljjrgakgdmpylcxk3m3xbm2xwc6lbjvl7sk1pmxvpx3hhhc"; depends=[Matching]; }; SAMURAI = derive2 { name="SAMURAI"; version="1.2.1"; sha256="02fipbjcsbp2b2957x6183z20icv1yly2pd1747nyww9bmpa7ycm"; depends=[metafor]; }; @@ -3370,6 +3509,7 @@ in with self; { SASmixed = derive2 { name="SASmixed"; version="1.0-4"; sha256="0491x4a3fwiy26whclrc19alcdxccn40ghpsgwjkn9sxi8vj5wvm"; depends=[]; }; SASxport = derive2 { name="SASxport"; version="1.6.0"; sha256="1g8sfi61im9i04whybwqq4rl6glisbziqaag1mdfqykxryakjf04"; depends=[Hmisc stringi]; }; SAVE = derive2 { name="SAVE"; version="1.0"; sha256="1m9rrga8x00hlvn0c1jcz6yz14pdm6h3dq14905mq49sw63c7zll"; depends=[coda DiceKriging]; }; + SAVER = derive2 { name="SAVER"; version="1.1.1"; sha256="1jkyxnpvbm6zrhf2q9i98gchv786wh83mx0i1vnz2hqa766jk2nj"; depends=[doParallel foreach glmnet iterators Matrix]; }; SBRect = derive2 { name="SBRect"; version="0.26"; sha256="16g0ciy9q9irypsl8x36i0lavl41j3af13r2si0by8q6wj56pxi4"; depends=[rJava]; }; SBSA = derive2 { name="SBSA"; version="0.2.3"; sha256="1v23lzzziyjlvgn5p2n1qcq2zv9hsyz2w15lbnfi5wvinxhlg8sc"; depends=[Rcpp RcppArmadillo]; }; SBSDiff = derive2 { name="SBSDiff"; version="0.1.0"; sha256="0mw1646dmhxw6zz4pq7j0g3mf9bjn72g43sq7m72r8ma8ciqj7r2"; depends=[]; }; @@ -3378,15 +3518,18 @@ in with self; { SCCS = derive2 { name="SCCS"; version="1.0"; sha256="0v1ycyx45jlv4y82q0kpcmmfcaaspmkk9nd89k6cfh24n6zf9j6w"; depends=[corpcor dummies fda gnm R_methodsS3 survival]; }; SCEPtER = derive2 { name="SCEPtER"; version="0.2-1"; sha256="19sphwcsj2z05dvpmz7vgxykzyghkfn79jwqvk6d66daman679mv"; depends=[MASS]; }; SCEPtERbinary = derive2 { name="SCEPtERbinary"; version="0.1-1"; sha256="0rab0widfndx94dn1nchhs06q0d57vq2n3xy79p130l9rgp9v489"; depends=[MASS SCEPtER]; }; - SCGLR = derive2 { name="SCGLR"; version="2.0.3"; sha256="03v76nh6ng41hh4lm27r8ipf382sj98dyl9lh4fzl4y6ff1vwzzj"; depends=[expm Formula ggplot2 Matrix pROC scales]; }; + SCGLR = derive2 { name="SCGLR"; version="3.0"; sha256="10hsvcjgsycap6wkp06snp2zab1ppsp78kyncpbjnm3vp84qm0nz"; depends=[ade4 expm Formula ggplot2 Matrix pROC]; }; SCI = derive2 { name="SCI"; version="1.0-2"; sha256="1jvzkdv15ifgf6a3zjfzzcgw2y2vg0wp7yhiamiaqp8xkm142w49"; depends=[fitdistrplus lmomco]; }; + SCINA = derive2 { name="SCINA"; version="1.0.1"; sha256="05sdg2l2jvwl95c0r11l22wjzqjygc4g1y6awmcx7jz0zv8gmnhx"; depends=[gplots MASS]; }; SCMA = derive2 { name="SCMA"; version="1.2.1"; sha256="17hn3axhmd6wchh1zmgrj026y5yhg6w68d1mif38rrf5cb2wwjnq"; depends=[]; }; SCORER2 = derive2 { name="SCORER2"; version="0.99.0"; sha256="1a28wga69ip9s98ch2dqgl0qkwa3w6frmaqcvhclc360ik813mxq"; depends=[]; }; SCORPIUS = derive2 { name="SCORPIUS"; version="1.0.2"; sha256="01rg3c5i5wbdbkssmzr9x8chd9qm3ijdgvdh1cba6ry9y88f6ry5"; depends=[dplyr dynutils ggplot2 magrittr MASS mclust pbapply pheatmap princurve purrr ranger RColorBrewer reshape2 tidyr TSP]; }; + SCPME = derive2 { name="SCPME"; version="1.0"; sha256="0yhsaaa349wbrswcvp7w8c52wzp7rs3528rs4wqa8b3r3fh983mh"; depends=[doParallel dplyr foreach ggplot2 Rcpp RcppArmadillo RcppProgress]; }; SCRSELECT = derive2 { name="SCRSELECT"; version="1.3-3"; sha256="118vwnd5gggvdhq7fbs0553l84vh5mhiag41q4svprd7p0pqd9hd"; depends=[mvtnorm]; }; SCRT = derive2 { name="SCRT"; version="1.2.2"; sha256="1x6bzcgb5blavj4zdw4jam5r8yad3plyfzk31vz9pjv39784k229"; depends=[]; }; SCVA = derive2 { name="SCVA"; version="1.2.1"; sha256="1ixy4ybw3c9w6q8csjv27r5f9x6988zrbr2a3yybhyw8xmkszc4v"; depends=[]; }; SCperf = derive2 { name="SCperf"; version="1.1.1"; sha256="1kqi3sv9ds58l20pdcnjrrbf7fin82j73yqj5rbx4kjdw560ylb2"; depends=[]; }; + SDALGCP = derive2 { name="SDALGCP"; version="0.1.0"; sha256="1ll39ws3hlz07v180g8k55z7ziyrqghndpvd0wp0pc85mw5i6f8s"; depends=[maptools Matrix pbapply pdist plyr PrevMap progress raster sp spatstat splancs]; }; SDD = derive2 { name="SDD"; version="1.2"; sha256="0wzgm1hgjv5s00bpd7j387qbvn5zvyrrd5fr2rgyll4cw9p4sd33"; depends=[Hmisc rgl rpanel sm tseries]; }; SDDE = derive2 { name="SDDE"; version="1.0.1"; sha256="14vql1bypn409w9xcx1jdzff6apiagcz2wng3y24h3mk7yjv9bzy"; depends=[doParallel foreach igraph iterators]; }; SDEFSR = derive2 { name="SDEFSR"; version="0.7.1.0"; sha256="1pknkda7iaq5247557b93kc3cf2ih7b3wpqpkqyfgfay3ci9kg16"; depends=[]; }; @@ -3413,17 +3556,18 @@ in with self; { SGL = derive2 { name="SGL"; version="1.1"; sha256="1wc430jqn3li102zpfmyyavfbab7x7ww9p89clxsndyigrrbjdr7"; depends=[]; }; SGP = derive2 { name="SGP"; version="1.8-0.0"; sha256="02yh6kvc34gn33cbnhc5b86pmir1zbl6s875hangwb3qx7r13dx0"; depends=[Cairo colorspace crayon data_table digest doParallel doRNG equate foreach gridBase gtools iterators jsonlite matrixStats plotly quantreg randomNames RSQLite sn toOrdinal]; }; SGPdata = derive2 { name="SGPdata"; version="20.0-0.0"; sha256="0fxv7nnxiaq6z9wii9x5qiy0vd2z8jw3gcwl5fj9m29ja7j3900g"; depends=[crayon data_table]; }; - SHELF = derive2 { name="SHELF"; version="1.3.0"; sha256="0qhkp1ypbimiq9r8yv95bipbmhm7b38ibbk9nmhdckrr6ymd2w35"; depends=[ggExtra ggplot2 MASS shiny tidyr]; }; + SHELF = derive2 { name="SHELF"; version="1.4.0"; sha256="1lc8f19dvnpv1mg32q3vrg96pwcsapkb30fqis6q58v434v42x89"; depends=[ggExtra ggplot2 gridExtra MASS rmarkdown scales shiny tidyr]; }; SHIP = derive2 { name="SHIP"; version="1.0.2"; sha256="0b83cclibdz1r7sz968nmca4najwgps9wrdlsh4gxrl7fq40k4ln"; depends=[]; }; - SI = derive2 { name="SI"; version="0.1.0"; sha256="11ywmyz4mamk30p4m9qvgmba237s1xvabablh91rwq13089x8nxm"; depends=[]; }; + SI = derive2 { name="SI"; version="0.2.0"; sha256="0i6kpaw5yk39skm77nf56ai25clkparz3l8qx0223jrmdqbf97b7"; depends=[]; }; SIBER = derive2 { name="SIBER"; version="2.1.3"; sha256="14ab9zid0i400kj924m2y5qgp2iibnpllhqw11rlmdf8j9cr7858"; depends=[dplyr ggplot2 hdrcde magrittr mnormt rjags spatstat_utils tidyr viridis]; }; SIBERG = derive2 { name="SIBERG"; version="2.0.2"; sha256="0wfx1dpjd09gb736sm2xhrkba26nwnzn5x575h39n2g33jwqqy2r"; depends=[mclust]; }; SID = derive2 { name="SID"; version="1.0"; sha256="1446zy4rqbw0lpyhnhyd06dzv238dxpdxgmsk34hqv7g3j7q5h1w"; depends=[igraph Matrix pcalg RBGL]; }; - SIDES = derive2 { name="SIDES"; version="1.11"; sha256="1gmhfj44qdklsdklmg8p35lmvlgla8i881i3iaziblslyscbyw9f"; depends=[doParallel foreach MASS memoise multicool nnet survival]; }; + SIDES = derive2 { name="SIDES"; version="1.13"; sha256="10759nx2x3gy6zacn37fpr2dgx8j8ap8ic4infljfk0048f9in8w"; depends=[doParallel foreach MASS memoise multicool nnet survival]; }; SII = derive2 { name="SII"; version="1.0.3"; sha256="1k9mvz6g25qs351c0vx7n5h77kb6k833jrcww14ni59yc9jgvsyg"; depends=[]; }; SILGGM = derive2 { name="SILGGM"; version="1.0.0"; sha256="1lhmisgg2zbfksl7czz0fqag3732gkjc44n615ipxbdi2pvnc7m0"; depends=[glasso MASS Rcpp reshape]; }; SIMMS = derive2 { name="SIMMS"; version="1.1.1"; sha256="1wgqz8zgijv5psz5r5zj9k63ikq5sr1dxqxvh48n2041slj6jdap"; depends=[doParallel foreach glmnet MASS survival xtable]; }; SIN = derive2 { name="SIN"; version="0.6"; sha256="0vq80m3vl8spdnlkwvwy0gk3ziyybqzjp3scnfdcpn942ds7sgg9"; depends=[]; }; + SIRE = derive2 { name="SIRE"; version="1.0.2"; sha256="1y313wmbpp7yiqg6sc280s97z1xp5zlpiddx42zwzwanikxscikx"; depends=[igraph MASS Matrix matrixcalc numDeriv psych stringr systemfit]; }; SIRItoGTFS = derive2 { name="SIRItoGTFS"; version="0.2.4"; sha256="1hyhjwkv26fpplzqrdh41r8j91la5j0jidbwnh2vla6s3wf7jg47"; depends=[data_table dplyr easycsv reshape2 rgdal rgeos sp]; }; SIS = derive2 { name="SIS"; version="0.8-6"; sha256="1749ks5iqlj6lrn0hglifj1iy86dcpqz2pcnf1l798pa05rq8ngd"; depends=[glmnet ncvreg survival]; }; SISIR = derive2 { name="SISIR"; version="0.1"; sha256="08lw9y38j5qq00m2vcxsac97lg14j4w1y6607vw8isrb3qb5db9z"; depends=[doParallel expm foreach glmnet Matrix RSpectra]; }; @@ -3445,6 +3589,7 @@ in with self; { SMNCensReg = derive2 { name="SMNCensReg"; version="3.0"; sha256="06542jacy74mw6ic0i1ml09pn45sll96bya7dqja6bg9yp0m6bvr"; depends=[Matrix PerformanceAnalytics]; }; SMPracticals = derive2 { name="SMPracticals"; version="1.4-2"; sha256="0apmkmsv2fqmxpgq08n9k9dvcknj74s4cpp0myjcd6kibb7g9slq"; depends=[ellipse MASS nlme survival]; }; SMR = derive2 { name="SMR"; version="2.0.1"; sha256="0qy56fmismcjklpf29ic2gi1g8ajdjpxsl0akb9cqzyisyf641ia"; depends=[]; }; + SMUT = derive2 { name="SMUT"; version="1.0"; sha256="1dsmj0h969q9q6qjamr73yfjxbq7hfjmcawra3lynangnc78y1l7"; depends=[MASS Rcpp RcppEigen SKAT]; }; SMVar = derive2 { name="SMVar"; version="1.3.3"; sha256="17wr4lixy3p32gr4jq02d7zsr88yrbddjsvynzdsdrwbxf4mwqhp"; depends=[]; }; SNFtool = derive2 { name="SNFtool"; version="2.3.0"; sha256="1yplcwmy7jhsvz19r82ivpxfqav7q88jcf8d0r2k8ll9iqmi1dbc"; depends=[alluvial ExPosition heatmap_plus]; }; SNPMClust = derive2 { name="SNPMClust"; version="1.3"; sha256="1gad1jfla4qpczh8vpwyss5cckzgpffsyj0d71r8drbspr4i3r90"; depends=[MASS mclust]; }; @@ -3454,7 +3599,6 @@ in with self; { SNSequate = derive2 { name="SNSequate"; version="1.3.1"; sha256="1w6yai79996pgg98skfb63kha8rqjzn751nmxg961rc4id1g8ysn"; depends=[emdbook knitr magic plyr progress statmod]; }; SNscan = derive2 { name="SNscan"; version="1.0"; sha256="1s7dxi7faih0phx5wk2xrrzhvfwicq3h2cg8x2klwbrslin973lz"; depends=[igraph poweRlaw Rmpfr]; }; SOAR = derive2 { name="SOAR"; version="0.99-11"; sha256="1n38gx5sxpkqfkk4y6vpp6g19b8bs5bisni9wn6311s0csizp86m"; depends=[]; }; - SOD = derive2 { name="SOD"; version="1.0"; sha256="0f0rh1qsjzxb3zzr440kvl6fnnj7dvc5apdzs5hpf6xrlfg863pk"; depends=[Rcpp]; }; SODC = derive2 { name="SODC"; version="1.0"; sha256="18s4rcp5dzchvwrzzbfhbs3x91zlg1rymjarxjk5i429mfrn0krx"; depends=[magic MASS ppls psych]; }; SOFIA = derive2 { name="SOFIA"; version="1.0"; sha256="1jlaggxa2nz2r5yb2xmf0dh5wmxfdk6xwn0l3nwsqh82vyxhp7l9"; depends=[png]; }; SOIL = derive2 { name="SOIL"; version="1.1"; sha256="0dvfh84xjzald51kmdb546par2rbjdn3nys9y9w7cvafv2lc5yj9"; depends=[brglm2 glmnet MASS ncvreg]; }; @@ -3470,7 +3614,7 @@ in with self; { SPAr = derive2 { name="SPAr"; version="0.1"; sha256="068jlsvaxx80ih6n86286m2r75cvy6w0m51vpj4gfclhh38py4p4"; depends=[]; }; SPAtest = derive2 { name="SPAtest"; version="3.0.0"; sha256="0pq8mbj05x4l3lvdgayxigviirhx6ghf4w5bkpvg9hggkb79ib9y"; depends=[]; }; SPCALDA = derive2 { name="SPCALDA"; version="1.0"; sha256="1bmp2zz0favmpyp0ap8a2r1mg1nlan7zg5cj75drdnfpqlsn5vgl"; depends=[MASS]; }; - SPCAvRP = derive2 { name="SPCAvRP"; version="0.2"; sha256="1kqx2mf75h491aj6rm923frpj1yl9c1p666cq3f1d7aa1k9byrzi"; depends=[MASS]; }; + SPCAvRP = derive2 { name="SPCAvRP"; version="0.3"; sha256="1j4469ny70xsyaf9qa403yg0n63c1as6mkw7a6ql4h7aa53bz5sz"; depends=[MASS]; }; SPECIES = derive2 { name="SPECIES"; version="1.0"; sha256="0p45llf2wjr467bqr4pbljfank9zz3fm42yl3i0r3jbkxgz0rjf0"; depends=[]; }; SPEDInstabR = derive2 { name="SPEDInstabR"; version="1.6"; sha256="1py7vw1jfn9pf0xj1syyk7xv5593bilmzrb0p3iy85bks8iijlgx"; depends=[]; }; SPEI = derive2 { name="SPEI"; version="1.7"; sha256="0lj7d3bbik7q4di5nqc3a1rn94z2y2v9x45r1jjkvgf03frj96qd"; depends=[ggplot2 lmomco]; }; @@ -3484,22 +3628,22 @@ in with self; { SPREDA = derive2 { name="SPREDA"; version="1.0"; sha256="1dyqsra899fd1nbk1b7vkw8gs455c6pbcvzw84q9iri77186xqhv"; depends=[nlme survival]; }; SPRT = derive2 { name="SPRT"; version="1.0"; sha256="1r4pfqh8k5avi8qgpk5x1cy8lmkn341yvjvd2r7wqwb3mr242r0v"; depends=[]; }; SPSL = derive2 { name="SPSL"; version="0.1-8"; sha256="1jg1nfhz8qml1wwqa4d0w7vkdmbgdy5xlfqx0h2pdw2z8iij3xxc"; depends=[]; }; - SPUTNIK = derive2 { name="SPUTNIK"; version="1.0.2"; sha256="0hf6g3s17ri1qzl1180s4akyhp98lj6zx5ix1z6rh53gk6dvxb5l"; depends=[autothresholdr ggplot2 imager infotheo reshape SDMTools spatstat viridis viridisLite]; }; + SPUTNIK = derive2 { name="SPUTNIK"; version="1.1.1"; sha256="1spzl3dhxf0715xibl9ny2v4xgikd8chwdzb3ari1sj82jx1544p"; depends=[e1071 ggplot2 imager infotheo reshape SDMTools spatstat viridis]; }; SPYvsSPY = derive2 { name="SPYvsSPY"; version="0.1.1"; sha256="1hxc73wwrzqh1r1xr9yd4hy4ma24virg4iv978lfyc9f9n56znp5"; depends=[]; }; SPmlficmcm = derive2 { name="SPmlficmcm"; version="1.4"; sha256="1acs3560a7h6xx286m40abr9b7i5qihn6wni8flj0biahmsszzx6"; depends=[nleqslv]; }; SPreFuGED = derive2 { name="SPreFuGED"; version="1.0"; sha256="1cdamkrr0xpc0l2dypd9lgjidrmalfxs0ms7z3wfmf22a8b3y0d2"; depends=[Biobase boot CMA lattice limma lme4 mvtnorm]; }; - SQB = derive2 { name="SQB"; version="0.2"; sha256="11ccgf6bsnzfmqs92jl1ds09h2352qhjmwb88dvd7qww9admd0ig"; depends=[caret nnet pls rpart]; }; + SQB = derive2 { name="SQB"; version="0.4"; sha256="12ii8xlwd2r77bj76j7l43898ras25z3plhhv106jaklhpcnk23m"; depends=[caret nnet pls rpart]; }; SQDA = derive2 { name="SQDA"; version="1.0"; sha256="0nfimk625wb64010r5r7hzr64jfwgc6rbn13wvrpn0jgayji87h6"; depends=[limma mvtnorm PDSCE]; }; SQN = derive2 { name="SQN"; version="1.0.5"; sha256="0kb8kf6g482zqdp4avwvhs3pqghfny757dbzfl1abaigmvwvx4qj"; depends=[mclust nor1mix]; }; - SQRL = derive2 { name="SQRL"; version="0.4.0"; sha256="0wl4drma9nznqdbgb95wq2g12iy87g4s3h67n8dpxp7alx5lxy7q"; depends=[RODBC]; }; + SQRL = derive2 { name="SQRL"; version="0.5.0"; sha256="19mfr45csr23nw7w3li1iyb6hyf94a7w3xlm1rp8dx2ad0vdhzy2"; depends=[RODBC]; }; SQUAREM = derive2 { name="SQUAREM"; version="2017.10-1"; sha256="10xj26x7qjyvzndnbjl5krr9wabnb9cbrnp3m7xg673g8ddr12cv"; depends=[]; }; SRCS = derive2 { name="SRCS"; version="1.1"; sha256="13zf3cqs53w68f9zc1fkb9ql84rvzn7g1hbykqrbvss8hjaq8x1r"; depends=[]; }; SRRS = derive2 { name="SRRS"; version="0.1.1"; sha256="0jv545a97q4pyl89lmhn3y0jhdzyq033mvx144x8lcgx59s7cyi3"; depends=[gtools tcltk2]; }; - SSBtools = derive2 { name="SSBtools"; version="0.2.1"; sha256="1cqdmvh9gxyx2yciy0j54v84hl8cayifv368ip5y3k6g1cff6488"; depends=[]; }; + SSBtools = derive2 { name="SSBtools"; version="0.3.0"; sha256="14vs51cq34n2i7gwzs4yr53azhl8c1my293q6x7brvy6pflyj9w6"; depends=[Matrix stringr]; }; SSDM = derive2 { name="SSDM"; version="0.2.4"; sha256="1zn0iaav58pjzd6ckm28w16pblkjxacj2s1daj0sk0423dhjkf76"; depends=[dismo e1071 earth gbm gplots mgcv nnet randomForest raster rpart SDMTools shiny shinydashboard shinyFiles sp spThin]; }; - SSDforR = derive2 { name="SSDforR"; version="1.4.18"; sha256="0ffy6gk94q4wlil4jhvc0y2pxim81vza517scly71zwp004381q3"; depends=[MASS psych TSA TTR]; }; + SSDforR = derive2 { name="SSDforR"; version="1.4.21"; sha256="1k73wy1krs4ngh639ajshi1pap13gl7xcwwi2fa0zzng1kyfwp1v"; depends=[MAd MASS metafor psych TSA TTR]; }; SSL = derive2 { name="SSL"; version="0.1"; sha256="0fy6svf8xfni72bpsg8a5wr8ly46srhfixk8866lrcsp8pb6mqcd"; depends=[caret e1071 klaR NetPreProc proxy Rcpp xgboost]; }; - SSLASSO = derive2 { name="SSLASSO"; version="1.1"; sha256="0zkzsdk568y9n9yj160i2vxgl570zvrfagwyafapypq5bz1cyjpi"; depends=[]; }; + SSLASSO = derive2 { name="SSLASSO"; version="1.2-1"; sha256="0x9nbq9lsnq9g47y50z2ymfbj09l2d1lbii2cfjm76nzk3k5lb39"; depends=[]; }; SSM = derive2 { name="SSM"; version="1.0.1"; sha256="1h8yyzh5rn5jay70kyzvwirfndi049a5w28qigrjv5rxd7ml84l7"; depends=[]; }; SSN = derive2 { name="SSN"; version="1.1.13"; sha256="0hk138p1jnlda7d2wxlrf2ipkgliqlip1i5xp67aym979g0b3aaj"; depends=[BH igraph lattice maptools MASS Matrix rgdal rgeos RSQLite sp]; }; SSRA = derive2 { name="SSRA"; version="0.1-0"; sha256="1d0lg2dz8vf1d63366s5apm0ygrsfxivbrsij907r244zj6i1c37"; depends=[shape stringr]; }; @@ -3514,11 +3658,12 @@ in with self; { STEPCAM = derive2 { name="STEPCAM"; version="1.2"; sha256="03crbc7hag8w333j9c7k0q7zy7xmfid4lq773p74r55jmac5xpjf"; depends=[ade4 ape FD geometry gtools MASS vcd]; }; STI = derive2 { name="STI"; version="0.1"; sha256="1p408y9w2h4ljaq0bsw7vc1xghczjprf558cyg6994m0nv5fh4c4"; depends=[fitdistrplus zoo]; }; STMedianPolish = derive2 { name="STMedianPolish"; version="0.2"; sha256="0jzgcfhm09cccg2nwbvrmnkah1psbnmg26rc2n7lz26n4b20p3l2"; depends=[gstat maptools nabor reshape2 sp spacetime zoo]; }; - STPGA = derive2 { name="STPGA"; version="4.0"; sha256="198h2wzhv5lnyqypn7s5lilywby2pq3zdx8vk4qd72bybfwwli2c"; depends=[]; }; + STMotif = derive2 { name="STMotif"; version="1.0.0"; sha256="13qcayqvf60akk6y3gyhll1cz5mdllfn848i2241pz9appdgdsvy"; depends=[ggplot2 reshape2 scales shiny]; }; + STPGA = derive2 { name="STPGA"; version="5.2"; sha256="1pllwr6x9nagf7l6w3m021bkhhp8l0l5zlc1jqrvj0irv6r2r7vp"; depends=[AlgDesign emoa scales scatterplot3d]; }; STRMPS = derive2 { name="STRMPS"; version="0.5.8"; sha256="0vlmhrna0laqzjpbg4sgnscrli3cly2lc5d69n6iqfl213zsfz78"; depends=[Biostrings dplyr IRanges purrr ShortRead stringr tibble tidyr]; }; STV = derive2 { name="STV"; version="1.0.0"; sha256="034d9qnvgmk97ah7r9w2hvnw39f7mxs2ml6y8dad94p8phl52gfw"; depends=[]; }; SUE = derive2 { name="SUE"; version="1.0"; sha256="0akv724s84v2zixvwywj1ydfnfvcjnaabv6gm0601nsrh6ij1mi6"; depends=[]; }; - SUMMER = derive2 { name="SUMMER"; version="0.2.0"; sha256="019yfw76jihk886990pivq1mzbbjbwpn7b4bvmacgbb9v6qrsl3b"; depends=[classInt ggplot2 maptools Matrix pixmap RColorBrewer reshape2 rgeos sp spdep survey survival]; }; + SUMMER = derive2 { name="SUMMER"; version="0.2.1"; sha256="11qm0spisx8f733d7gjyq8r82zvpv7mjpzxz5xfigyhyzrds18d2"; depends=[ggplot2 maptools Matrix reshape2 spdep survey survival]; }; SVMMaj = derive2 { name="SVMMaj"; version="0.2-8"; sha256="13d9v1l85md1v6qyfrdc3l36yanw5canskngjr1sh0hmyla182bz"; depends=[dplyr ggplot2 gridExtra kernlab reshape2 scales]; }; SVMMatch = derive2 { name="SVMMatch"; version="1.1"; sha256="1ykwrhlid4hs466xh3kv6y2qdhgk0jiglg0l3zwk5qlni6p26zc9"; depends=[Rcpp RcppArmadillo]; }; SWATmodel = derive2 { name="SWATmodel"; version="0.5.9"; sha256="1i48g9nbjfn30ppwyzyz3k181nscv4wx773l8mzfdwhx0nlv4kyj"; depends=[EcoHydRology]; }; @@ -3531,8 +3676,9 @@ in with self; { SampleSize4ClinicalTrials = derive2 { name="SampleSize4ClinicalTrials"; version="0.1.0"; sha256="0wx1rfyf753wppjwwb3l1zpmg4b2mwnwjcw45yzav54yxaszy2v3"; depends=[]; }; SampleSizeMeans = derive2 { name="SampleSizeMeans"; version="1.1"; sha256="1wbc46n8b8wbcxl21blbzs5728dr8r0l8d3jpzbha8pcav0xrh1m"; depends=[]; }; SampleSizeProportions = derive2 { name="SampleSizeProportions"; version="1.0"; sha256="0mvkvx3nni0l8ys68sq3h2zlbjvksdcdzxqlf03k0ca5bbcmdf9l"; depends=[]; }; - SamplerCompare = derive2 { name="SamplerCompare"; version="1.2.9"; sha256="1fl9wgbfnkn2ai4swspl88crqpgd9b43hj8rkqkky4b49b8f6bj8"; depends=[mvtnorm]; }; - SamplingStrata = derive2 { name="SamplingStrata"; version="1.2"; sha256="1qz0pcmp8a9wbq8qx1j2bv1j4makx97v9n4aiklagnmszg2gvggy"; depends=[memoise]; }; + SamplerCompare = derive2 { name="SamplerCompare"; version="1.3.0"; sha256="1lqnkgbg1naa3crk3rakrf37vvxj6mbilbpxrv0k5iifdmh0b7k1"; depends=[mvtnorm]; }; + SamplingBigData = derive2 { name="SamplingBigData"; version="1.0.0"; sha256="0khrh7vfqqzpfp16x0ic5ml854wr2fj28cx95s6c0pz91hzlxkns"; depends=[]; }; + SamplingStrata = derive2 { name="SamplingStrata"; version="1.3"; sha256="0x4qppi3pbxmlcpcp62yxjia3nk3iy2f1rl6wqm0jsjp4rbn2mn9"; depends=[doParallel memoise pbapply]; }; SanFranBeachWater = derive2 { name="SanFranBeachWater"; version="0.1.0"; sha256="18w2q3hzcrbmagnjyrn1ikwiyjh723mjb2vy0d8p1a6za0460p9w"; depends=[dplyr lubridate magrittr readr rvest tibble xml2]; }; SanzCircos = derive2 { name="SanzCircos"; version="0.1.0"; sha256="0vw41qldp1gsj4mx2hdd5jfhx9r8pv62i8gvs86p6bvfzy2l1lq4"; depends=[dplyr pbapply purrr randomcoloR readr tibble tidyr]; }; Scale = derive2 { name="Scale"; version="1.0.4"; sha256="1fa3840kji34qpbw6mxfavk8wq0vq0vx2w6ya71idbkxnvwc3y06"; depends=[Hmisc MASS psych]; }; @@ -3558,39 +3704,37 @@ in with self; { SeleMix = derive2 { name="SeleMix"; version="1.0.1"; sha256="1qzy59wbjh8llm66l70xi0p3lv94iawh2h5vwa9sqy2ra5vmpaxk"; depends=[mvtnorm]; }; Select = derive2 { name="Select"; version="1.4"; sha256="1qx4wwxxwjq31vf645xvwb0y2z5h4v6ca8fcrfpaj5kc33f333v2"; depends=[ade4 FD lattice latticeExtra Rsolnp]; }; SelvarMix = derive2 { name="SelvarMix"; version="1.2.1"; sha256="02d16ffw5syq0d3yiim9jgrjlz99n956zxp23idpsmq6lb2whq66"; depends=[glasso Rcpp RcppArmadillo Rmixmod]; }; - SemNetCleaner = derive2 { name="SemNetCleaner"; version="0.1.1"; sha256="0ry6lv33iynh1dy31zag5z36wr1limi8d7bbcjykcbgsbwcbazfj"; depends=[doParallel dplyr foreach ggplot2 magrittr NetworkToolbox plyr purrr qdap RColorBrewer tm]; }; + SemNetCleaner = derive2 { name="SemNetCleaner"; version="0.9.9"; sha256="1pbp1h3kqgrdwr28psbrnd8i67rbff8hyldry46511zjmc8c7zaq"; depends=[qdap]; }; Semblance = derive2 { name="Semblance"; version="0.1.0"; sha256="11mpqfpv7i5nqyn9s63bfphj35sh4gx4hjy0gc22sfqn0lmvl132"; depends=[fields]; }; SemiCompRisks = derive2 { name="SemiCompRisks"; version="3.1"; sha256="0m0primbkpjw4pmmabdgvp5l21aqfifnryga1rp2ng9cm5ncxxqg"; depends=[Formula MASS survival]; }; SemiMarkov = derive2 { name="SemiMarkov"; version="1.4.4"; sha256="1dj8gj04yfn0lj83b90b4p0ilgphmzcalz95xw7xgvivww8yj1dg"; depends=[MASS numDeriv Rsolnp]; }; SemiPar = derive2 { name="SemiPar"; version="1.0-4.2"; sha256="0pa3drpvclkw81ji5m1h5arj5c2rh03dnlff97cnnr1v5kvg1i4w"; depends=[cluster MASS nlme]; }; SemiParSampleSel = derive2 { name="SemiParSampleSel"; version="1.5"; sha256="0apbg8sddz2ab9170wvf7p6cgawvp4w13r97r5q7p3hx2hylb8sw"; depends=[CDVine copula gamlss_dist magic Matrix matrixStats mgcv mvtnorm trust VGAM]; }; SenSrivastava = derive2 { name="SenSrivastava"; version="2015.6.25"; sha256="0r4p6wafnfww07kq19lfcs96ncfi0qrl8n9ncp441ri9ajwj54qk"; depends=[]; }; - SensMap = derive2 { name="SensMap"; version="0.6"; sha256="0j52aplvdlwwfswyrij0vv7zsdr015cn5931c6631rlps94gka0w"; depends=[doBy factoextra FactoMineR fields ggdendro ggplot2 glmulti lattice MCMCpack mgcv plotly shiny]; }; SensMixed = derive2 { name="SensMixed"; version="2.1-0"; sha256="0ykg94amnm9clf8d3naap8fmv9qqc6j1q52wnb83zk7ry44dp7dh"; depends=[doBy ggplot2 Hmisc lme4 MASS plyr reshape2 shiny shinyBS xtable]; }; SensitivityCaseControl = derive2 { name="SensitivityCaseControl"; version="2.1"; sha256="00jqzqx7g0av9lw13is723gph486gb8ga0wgcmmzpmb24s5nya9z"; depends=[]; }; SensoMineR = derive2 { name="SensoMineR"; version="1.23"; sha256="0a1s2wrb86a0y2faxj5ax8fa6vfcclgg7bcff4j7jb40ilxnxhn4"; depends=[AlgDesign cluster FactoMineR ggplot2 gtools KernSmooth reshape2]; }; - SensusR = derive2 { name="SensusR"; version="2.2.0"; sha256="0ahgy6mvlxfdavdarmfmb1ld1pykhbrjgg8mdh5q71b3a75vbp47"; depends=[ggmap ggplot2 jsonlite lubridate openssl plyr R_utils]; }; + SensusR = derive2 { name="SensusR"; version="2.3.0"; sha256="1gzww80p11zqs90psfx3yl7ncdkq3l55bcs4dxzikrnf5maqa193"; depends=[ggmap ggplot2 jsonlite lubridate openssl plyr R_utils]; }; SentimentAnalysis = derive2 { name="SentimentAnalysis"; version="1.3-2"; sha256="18vycj9vpb32610sn321sbwdnjldyjm9idjw9spggdzj7gsiwwk3"; depends=[ggplot2 glmnet mgcv moments ngramrr qdapDictionaries SnowballC spikeslab stringdist tm XML]; }; SeqAlloc = derive2 { name="SeqAlloc"; version="1.0"; sha256="04rhr3gb2p9i35a3x4k8m0lv42ncfqlhx6sf3bq8yihppwrag8x3"; depends=[]; }; SeqFeatR = derive2 { name="SeqFeatR"; version="0.2.7"; sha256="0qg1zpamcbjia2q8900yzihahb0y7kc48smxipncf8bb68256pyv"; depends=[ape Biostrings calibrate coda ggplot2 phangorn plotrix plyr qvalue R2jags scales tcltk2 widgetTools]; }; SeqGrapheR = derive2 { name="SeqGrapheR"; version="0.4.8.5"; sha256="041hlf64zbndz76r076pmym4dw4xl3fahryvpvjspw0sdlhmfm8c"; depends=[Biostrings cairoDevice gWidgets gWidgetsRGtk2 igraph rggobi]; }; SeqKat = derive2 { name="SeqKat"; version="0.0.6"; sha256="0idxyn84rqsg26y6ml218g037qxrx9755ikasyn212qacc36in39"; depends=[doParallel foreach Rcpp]; }; SeqMADE = derive2 { name="SeqMADE"; version="1.0"; sha256="0nf1xjhk0kpmmzgcxycg3ccxvwq6gydjq7xq6n9m7k7v35v9v3qf"; depends=[MASS]; }; - SequenceAnalysis = derive2 { name="SequenceAnalysis"; version="1.3"; sha256="0jrpq5ryw7rwkv99w0a5p3r0vj8nbzj6adlcsr84d9ffgxafmhif"; depends=[XML]; }; Sequential = derive2 { name="Sequential"; version="2.3.2"; sha256="01zvgvdj57js08krskahk1ng3wkv9iblmirslgrmllf4q18zwsdr"; depends=[]; }; SequentialDesign = derive2 { name="SequentialDesign"; version="1.0"; sha256="1gi37pixwbpy7358id1c75rckr352hs8vjs8sk8qgsr97pkm5xdq"; depends=[Sequential]; }; SetMethods = derive2 { name="SetMethods"; version="2.3.1"; sha256="0a8d476slmq1dpimmr1l97k2icjwr907rw463c9dqba82a3p8k7g"; depends=[betareg fmsb lattice QCA]; }; SetRank = derive2 { name="SetRank"; version="1.1.0"; sha256="0p7vwsw05s5hfw1mfh3fbm9nfzsymnxzrdjin7k21dx7asb618wy"; depends=[data_table igraph XML]; }; SetTest = derive2 { name="SetTest"; version="0.2.0"; sha256="08wc6cbnannmwkncqhpcw6l0y7c1v7z3awk5j7fd853nszfmpbk0"; depends=[]; }; - Seurat = derive2 { name="Seurat"; version="2.3.3"; sha256="0hfv4balzjjir8gdhrzb92ap36k6imq3igvb1nn0rhb0fq7959cr"; depends=[ape cluster cowplot diffusionMap doSNOW dplyr dtw fitdistrplus foreach fpc ggplot2 ggridges gplots hdf5r Hmisc ica igraph irlba lars lmtest MASS Matrix metap mixtools pbapply plotly png RANN RColorBrewer Rcpp RcppEigen RcppProgress reshape2 reticulate ROCR Rtsne SDMTools tidyr tsne]; }; + Seurat = derive2 { name="Seurat"; version="2.3.4"; sha256="0l8bv4i9nzz26mirnva10mq6pimibj24vk7vpvfypgn7xk4942hd"; depends=[ape cluster cowplot doSNOW dplyr dtw fitdistrplus foreach fpc ggplot2 ggridges gplots hdf5r Hmisc httr ica igraph irlba lars lmtest MASS Matrix metap mixtools pbapply plotly png RANN RColorBrewer Rcpp RcppEigen RcppProgress reshape2 reticulate ROCR Rtsne SDMTools tidyr tsne]; }; ShapeChange = derive2 { name="ShapeChange"; version="1.4"; sha256="1ch7avx8mxjk8vrp17inaihmbsv968wflyk1n4fbjvacbl24vn2b"; depends=[coneproj quadprog]; }; ShapePattern = derive2 { name="ShapePattern"; version="1.0.1"; sha256="18jzs0sq21qhldm86mgx7yb9kl473vv1aljl9hm4560xy5pd5fnb"; depends=[rgdal rgeos sp]; }; ShapeSelectForest = derive2 { name="ShapeSelectForest"; version="1.3"; sha256="1vvfl1ldrn0l9w38hx0hhszvj5a2dpmfl6ljzw7f0ji181lrx96m"; depends=[coneproj raster rgdal]; }; - SharpeR = derive2 { name="SharpeR"; version="1.1.0"; sha256="0qhvpwv81jznqfzm7xysm051ckv8ilq7zhsysxc7wripnlj01c4m"; depends=[matrixcalc sadists]; }; + SharpeR = derive2 { name="SharpeR"; version="1.2.0"; sha256="1gw8wwdqbra4bccbcamqn2j7d853rga1vcvk1p6naih6vbnfqn2s"; depends=[matrixcalc sadists]; }; ShinyImage = derive2 { name="ShinyImage"; version="0.1.0"; sha256="0nhsaq6i9lr8gqpdkahw3qr0c0cb0qwc0nqpk1ism21l6zg6ahc9"; depends=[EBImage R6 shiny shinyjs]; }; - ShinyItemAnalysis = derive2 { name="ShinyItemAnalysis"; version="1.2.7"; sha256="0l350q6sy63m09fiamphhkc3hhlncqjn5r2w59gv2hwqnjhwhp2c"; depends=[corrplot CTT data_table deltaPlotR difNLR difR DT ggplot2 gridExtra knitr latticeExtra ltm mirt moments msm nnet plotly psych psychometric reshape2 rmarkdown shiny shinyBS shinyjs stringr WrightMap xtable]; }; + ShinyItemAnalysis = derive2 { name="ShinyItemAnalysis"; version="1.2.8"; sha256="1ly2jzaziy0jipng3ahk1vm4lfrwqnjpmgrbrzm2k6rgpxrwjjn4"; depends=[corrplot cowplot CTT data_table deltaPlotR difNLR difR DT ggplot2 gridExtra knitr latticeExtra ltm mirt moments msm nnet plotly psych psychometric reshape2 rmarkdown shiny shinyBS shinydashboard shinyjs stringr xtable]; }; ShinyTester = derive2 { name="ShinyTester"; version="0.1.0"; sha256="0wm4rl2p8ggw6v2chk9b6ygh5y8p8cwzbyra0nr0qr2ka97didp8"; depends=[dplyr purrr readr stringr tidyr visNetwork]; }; - ShortForm = derive2 { name="ShortForm"; version="0.4.1"; sha256="0c2q3lhcyfn3w4iqknid9gav11nlycy9lma5m49vixksv7rf5kyw"; depends=[ggplot2 lavaan stringr tidyr]; }; + ShortForm = derive2 { name="ShortForm"; version="0.4.2"; sha256="0lfnafkkwfhqv984mrbd13inck1sdzn7rq1qdklfjwks89dx9ql9"; depends=[ggplot2 lavaan stringr tidyr]; }; ShrinkCovMat = derive2 { name="ShrinkCovMat"; version="1.2.0"; sha256="1ybd8vm69y50lj2mkmcdyplxb689xfg4spbl129v8hlvhw69mzmy"; depends=[]; }; SiER = derive2 { name="SiER"; version="0.1.0"; sha256="1ng6vnh30z6z1nvclsdzc9gdbrsrb2kqdqvs6fwm0j1zqlk12x0y"; depends=[]; }; SiMRiv = derive2 { name="SiMRiv"; version="1.0.3"; sha256="1kzvbzmqcxs0sh23nmjd39zkg68kbnc5djpbjhqhn55qjdfx5776"; depends=[mco raster rgdal sp]; }; @@ -3599,20 +3743,20 @@ in with self; { SigTree = derive2 { name="SigTree"; version="1.10.6"; sha256="18gh7azjr979ijc2y4yyskj24ay697rw3j7znc5p4a63s4vpxr9w"; depends=[ape MASS phyext2 phylobase phyloseq RColorBrewer vegan]; }; SightabilityModel = derive2 { name="SightabilityModel"; version="1.3"; sha256="0rgv5735y07yyv5y9c3flzha97ykn34ysmzy6as1z94hqfr4w746"; depends=[]; }; SignifReg = derive2 { name="SignifReg"; version="1.0"; sha256="1360892wy0qc6dch3753s4a17l3pcijjmxd34zqvzl9534arlsxd"; depends=[]; }; - Sim_DiffProc = derive2 { name="Sim.DiffProc"; version="4.0"; sha256="04p6q3g0afyky2ljxf471axik6vwj9l4dv4r487jrykrlhnjrm4z"; depends=[Deriv MASS rgl scatterplot3d]; }; + Sim_DiffProc = derive2 { name="Sim.DiffProc"; version="4.2"; sha256="0166m9z2iir7qmfmjd3q7sbkdp0znlynqd2d3smb3yykcf312jbs"; depends=[Deriv MASS]; }; Sim_PLFN = derive2 { name="Sim.PLFN"; version="1.0"; sha256="1jmsydhpfv2z9cr99hfy8cairhkkxpwk4wnz1adixwxazkn7qfah"; depends=[DISTRIB FuzzyNumbers]; }; SimComp = derive2 { name="SimComp"; version="3.2"; sha256="04rmpxasaa888p6f0rhhpvpqc39fppdkcwbq5sxcslx7bwc9w9z8"; depends=[mratios multcomp mvtnorm]; }; SimCop = derive2 { name="SimCop"; version="0.7.0"; sha256="1yrdy77a9h14v92c63ng8phi2ig73wy4xjjdb75322grc0bd3jq6"; depends=[quadprog]; }; - SimCorMultRes = derive2 { name="SimCorMultRes"; version="1.5.0"; sha256="10afb3k4rvsmgfx6m1csb0pvnjba1d896llfh3ksmjzxglmvslgw"; depends=[evd]; }; + SimCorMultRes = derive2 { name="SimCorMultRes"; version="1.6.0"; sha256="0x0wcc3nqw57xs7jiwc8bzmcwnb69dvpfp7anhx6bx607rcbxfpi"; depends=[evd]; }; SimCorrMix = derive2 { name="SimCorrMix"; version="0.1.1"; sha256="1mx8xkg1nbh4x4xr6m672zyg00s3lky2sy5mz7dfkw40vz2bwi53"; depends=[BB ggplot2 MASS Matrix mvtnorm nleqslv SimMultiCorrData triangle VGAM]; }; - SimDesign = derive2 { name="SimDesign"; version="1.10.1"; sha256="1g7nvzvmhkisl5bibigrsiv9s9xpigyib01vf05dhyc97f1vsg18"; depends=[foreach pbapply plyr]; }; + SimDesign = derive2 { name="SimDesign"; version="1.11"; sha256="0ifn5ma8rh42d75cx2qmv6fbqrw8f6h7kaa1l04648xnplcx7bcz"; depends=[foreach pbapply plyr]; }; SimEUCartelLaw = derive2 { name="SimEUCartelLaw"; version="1.0.1"; sha256="1wg9sayk55mp3f2qykvfk0cbqh050vh0n1fhpq4fmlxqll87aml9"; depends=[plot3D plot3Drgl rgl]; }; SimHaz = derive2 { name="SimHaz"; version="0.1"; sha256="04q4xyc1ki1zr3grm3khfg0kbykjy3j9qpg332l7pxp4j3wa3aw3"; depends=[survival]; }; - SimInf = derive2 { name="SimInf"; version="6.0.0"; sha256="1bbmyqh367g4c6a2mnd78y08svaqyr96sj61wg1zn3n06892ilpg"; depends=[Matrix]; }; + SimInf = derive2 { name="SimInf"; version="6.1.0"; sha256="1y9vk71k7rw7vk91nb25rf1vgnf6cqxw7b9lklrs41x6lk9ar0ps"; depends=[Matrix]; }; SimMultiCorrData = derive2 { name="SimMultiCorrData"; version="0.2.2"; sha256="0brszbqxf40y65xp96c5hp7hhvz3gv0xlg93r5ik8qdh0bn0y1sw"; depends=[BB GenOrd ggplot2 Matrix nleqslv psych triangle VGAM]; }; - SimPhe = derive2 { name="SimPhe"; version="0.1.1"; sha256="00qqqsf7na5c9nslnfpbyr2ysf7d7bi6vnpfiy761nhg8vgf2vjv"; depends=[]; }; + SimPhe = derive2 { name="SimPhe"; version="0.2.0"; sha256="01kzypahw41jk8s2c92h0k9w32yaicis07wb6k8qlqcmv0zj8xry"; depends=[]; }; SimRAD = derive2 { name="SimRAD"; version="0.96"; sha256="0ivvd3k04v1akbblxcjhlyc315z3ig7wjs0g3b37lvlfp54ppbrg"; depends=[Biostrings ShortRead zlibbioc]; }; - SimRVPedigree = derive2 { name="SimRVPedigree"; version="0.1.0"; sha256="1krdz4gxnqxj3wabc5hn7ayfqdfmpgg66zj09b3jnngcdaxkjlwb"; depends=[dplyr kinship2]; }; + SimRVPedigree = derive2 { name="SimRVPedigree"; version="0.3.0"; sha256="1ppms2cirdhm8lsfl74mfc1f9zwc7lin6r5xs649czqlj63yzk4i"; depends=[dplyr kinship2]; }; SimReg = derive2 { name="SimReg"; version="3.0"; sha256="188q399xcrvjw7y7lf3hfbb7x0m0hc4zaf9i1w2c4xzswmvljd8r"; depends=[ontologyIndex ontologyPlot ontologySimilarity Rcpp]; }; SimRepeat = derive2 { name="SimRepeat"; version="0.1.0"; sha256="1vq82wlnas0jkl8hlj7dnnbn4y1a56lmszs4w7wya7acri92gkqm"; depends=[BB ggplot2 MASS Matrix nleqslv SimCorrMix SimMultiCorrData triangle VGAM]; }; SimSCRPiecewise = derive2 { name="SimSCRPiecewise"; version="0.1.1"; sha256="0mhlx9m5db8a40wf275qh59345676m8bpjjmyx1v22f6m9p3b2n4"; depends=[]; }; @@ -3627,6 +3771,8 @@ in with self; { Simpsons = derive2 { name="Simpsons"; version="0.1.0"; sha256="1pm6wga1yxc35zgz72plzq23d3l4bbzfdvhszdxmkn1pkk64h8ms"; depends=[mclust]; }; SimuChemPC = derive2 { name="SimuChemPC"; version="1.3"; sha256="06sxknaykikcgbw7qbbw1risg0sbaisb68vhfd7cl6sg0327dznk"; depends=[rcdk]; }; SinIW = derive2 { name="SinIW"; version="0.2"; sha256="1z7rcjy0i09a9hjpjj1x8i46lv042l20lvb6b0pnsky2sx3v78pd"; depends=[fdrtool pracma]; }; + SingleCaseES = derive2 { name="SingleCaseES"; version="0.4.0"; sha256="0n2wybp06jx36095aw6073rdr2x1ahrnar28sqla2l2jd28ml72x"; depends=[dplyr magrittr purrr rlang tidyr tidyselect]; }; + SitesInterest = derive2 { name="SitesInterest"; version="1.0"; sha256="06l6i6jnzwj683cvd9a9dg4nlb1wy1v3wb561y97a25bikm3mfy6"; depends=[plotrix]; }; SixSigma = derive2 { name="SixSigma"; version="0.9-52"; sha256="07s4an2az2pgqhq9c08jrf6b95nrs1b3r1092d53n1ps8wbdmbln"; depends=[e1071 ggplot2 lattice nortest qcc reshape2 scales testthat xtable]; }; SizeEstimation = derive2 { name="SizeEstimation"; version="1.1.1"; sha256="1rz57y76hzp880511kzm7nhxf201n0dr7ccip6slrjz784dl7s27"; depends=[MCMCpack msm]; }; SkewHyperbolic = derive2 { name="SkewHyperbolic"; version="0.3-2"; sha256="10vilra5z884xinqkvk7ryi4nsq5zxlyn5qh23lsajba3b3qwhaw"; depends=[DistributionUtils GeneralizedHyperbolic RUnit]; }; @@ -3635,15 +3781,16 @@ in with self; { SkyWatchr = derive2 { name="SkyWatchr"; version="0.8-2"; sha256="0if44d79j2hlxdccn3jd7lrfbhrr09rfhfgds132syxprwkcb2mr"; depends=[htmlTable httr sp]; }; Sleuth2 = derive2 { name="Sleuth2"; version="2.0-4"; sha256="18mh1svmb96hw3rjmgxlwzs7kdcvjkxf4zm8k4w0sxz94ks062i7"; depends=[]; }; Sleuth3 = derive2 { name="Sleuth3"; version="1.0-2"; sha256="0b4g7j8a204wyvh0q9n1l4zrl9rk7ibyfijd49mjjdyg9zz4kbna"; depends=[]; }; - SmartEDA = derive2 { name="SmartEDA"; version="0.2.0"; sha256="0k89nvq074c2skjysw0n2cr410ki8f2p2fvzmwy779sgkbabc497"; depends=[data_table ggplot2 gridExtra ISLR rmarkdown scales stringi]; }; + SmallCountRounding = derive2 { name="SmallCountRounding"; version="0.2"; sha256="1xfx0cqrl7yz0a1alxk00ii2q63dawnlkg1s734sji6l6c0dvchy"; depends=[Matrix SSBtools]; }; + SmartEDA = derive2 { name="SmartEDA"; version="0.3.0"; sha256="0adx637nmajmjl9j1rbdmx3gl5v6mgd2m3jdxx3wa4z12pjbrdac"; depends=[data_table GGally ggplot2 gridExtra ISLR rmarkdown sampling scales stringi]; }; SmartSVA = derive2 { name="SmartSVA"; version="0.1.3"; sha256="10a8s2znsg8ywqkq9fsxiyqfsprrx33pqissazp2vmabs11mg4np"; depends=[isva Rcpp RcppEigen RSpectra sva]; }; SmartSifter = derive2 { name="SmartSifter"; version="0.1.0"; sha256="16rzma87k27qg6qy39mzywdj8pzkp7r9q7bpqyikazp3fk2nmfri"; depends=[mvtnorm rootSolve]; }; SmarterPoland = derive2 { name="SmarterPoland"; version="1.7"; sha256="03vs6hcd96va9kfhl2yq77alnm33j1dxy79kgrx17hlijsy65qqv"; depends=[ggplot2 htmltools httr jsonlite rjson]; }; Smisc = derive2 { name="Smisc"; version="0.3.9"; sha256="12chfjjg588a55q3yg0i507vl68hhk7zzprj849smq9azaxidn4k"; depends=[doParallel plyr]; }; SmithWilsonYieldCurve = derive2 { name="SmithWilsonYieldCurve"; version="1.0.1"; sha256="0qvhd1dn2wm9gzyp6k7iq057xqpkngkb4cfmvmjqmf0vhysp371w"; depends=[]; }; SmoothHazard = derive2 { name="SmoothHazard"; version="1.4.1"; sha256="147wjxgxnijpmixrfyl8kd4scz2w1xb8dcwvpr60zg32nv22g17r"; depends=[lava mvtnorm prodlim]; }; - SmoothWin = derive2 { name="SmoothWin"; version="1.0.0"; sha256="19yd3gnanv8q8ab0x8ds61rznm5w71dri0liknylikiqgbqwxrcn"; depends=[msgps]; }; - SnakeCharmR = derive2 { name="SnakeCharmR"; version="1.0.7"; sha256="1i8g0p51mp0j46434zzhmijwwk1v6my7rdw8j41ac3b4as3g0c73"; depends=[jsonlite Rcpp stringr]; }; + SmoothWin = derive2 { name="SmoothWin"; version="2.0.0"; sha256="1mkmrh9f08sgvx4zvca2q09lrwvy24bcgi72bhy1dzdc4fbpg2s5"; depends=[nlme]; }; + SnakeCharmR = derive2 { name="SnakeCharmR"; version="1.0.7.1"; sha256="12kzjrxjrgph95m949z6ri97nn97gh6avzqibw1jn76rsnjrhi6r"; depends=[jsonlite Rcpp stringr]; }; SnakesAndLaddersAnalysis = derive2 { name="SnakesAndLaddersAnalysis"; version="2.1.0"; sha256="0h3664h6d32q201qfyv9y2gg4fhg3azdpwpmx4qfbc10hsc1ghl9"; depends=[]; }; SnowballC = derive2 { name="SnowballC"; version="0.5.1"; sha256="0kbg33hy6m2hv9jspyx6naqmk2q6h2zmvvczjmkwqvlhzlj0c5s4"; depends=[]; }; SoDA = derive2 { name="SoDA"; version="1.0-6"; sha256="0sh2dan4ga2k14rirnkvgzsvbksx1k4ika5gkf5cy247rjkqnpj0"; depends=[]; }; @@ -3655,25 +3802,27 @@ in with self; { SoftClustering = derive2 { name="SoftClustering"; version="1.1502"; sha256="1pgg9mjpfw55m3ny726vx5wl8gwsdkrxv8xzgmy3aqdlwzhh4bwz"; depends=[]; }; SoilHyP = derive2 { name="SoilHyP"; version="0.1.1"; sha256="10lwfmhiavfyzypdb2rpc0rjsphy84vzg8mrdkncircss45cbvyp"; depends=[]; }; SoilR = derive2 { name="SoilR"; version="1.1-23"; sha256="1cryypgnbck5hvkc2izrd8r10q2b97f2p1s46x4dk8p099gck5wg"; depends=[deSolve RUnit]; }; - SolveLS = derive2 { name="SolveLS"; version="1.0"; sha256="0yb2sx3wjhccmkq8p3jj5pp8dgsdfvv4hr88km5yajl950wkbizp"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; SorptionAnalysis = derive2 { name="SorptionAnalysis"; version="0.1.0"; sha256="0drns1ajcga5z56hcgjxld1riwjn7vli8k1ma1xqifpy1qwy7ci6"; depends=[]; }; SortableHTMLTables = derive2 { name="SortableHTMLTables"; version="0.1-3"; sha256="1jgrqsm0cj8qlk0s4qn3b83w96mgpp5gmhgcg9q2glc72v8c4ljh"; depends=[brew testthat]; }; SoundexBR = derive2 { name="SoundexBR"; version="1.2"; sha256="0chc332v3wcz30v70yvdxhvcfdmvf4fj193cn00gl899xfxal89p"; depends=[]; }; SourceSet = derive2 { name="SourceSet"; version="0.1.1"; sha256="1326p28mngvi77b98n62cg6rln1qscyxz0616h7apc23ppdl7ybz"; depends=[graph gRbase gtools igraph plyr progress reshape2 scales]; }; - SoyNAM = derive2 { name="SoyNAM"; version="1.4"; sha256="0b48nm3xgvzws9222fmq07chqx4yllz4qjgzxg156s0waxfrjjfi"; depends=[lme4 NAM reshape2]; }; + SoyNAM = derive2 { name="SoyNAM"; version="1.5"; sha256="12qji7bdj0frf6ngwg1wybb29yxpv6cbyhiq2gayafdl48sm8his"; depends=[lme4 NAM reshape2]; }; SpATS = derive2 { name="SpATS"; version="1.0-8"; sha256="0j7yllnw9r8zhlh6jpkp5nsmzj0z3rzq0w6rkc36vp88a0giv15n"; depends=[data_table fields plot3Drgl spam]; }; + SpNMF = derive2 { name="SpNMF"; version="0.1.1"; sha256="1xybxx47i3ww5d7chwl38xc48fbsclgyxcki8h85c6dkm49dxy8i"; depends=[NMF]; }; + SpNetPrep = derive2 { name="SpNetPrep"; version="1.1"; sha256="1y3j7mwjxv69lrgqvi8kxvhlmdyr8v7gbg17741008xb32kgma8h"; depends=[leaflet maptools prodlim raster rgdal shiny shinythemes sp spatstat]; }; SpaCCr = derive2 { name="SpaCCr"; version="0.1.0"; sha256="0qm1fr6nnax3i1i77fi73x1z8db557avh6kivs0nskb1dfj8ri4m"; depends=[abind dplyr ggplot2 Rcpp RcppArmadillo tidyr]; }; SpaDES = derive2 { name="SpaDES"; version="2.0.2"; sha256="14l6rhaid4022c9gza6iy7kb6zr1844v16kn3hlgynf3zqv0mkr4"; depends=[quickPlot reproducible SpaDES_addins SpaDES_core SpaDES_tools]; }; SpaDES_addins = derive2 { name="SpaDES.addins"; version="0.1.1"; sha256="0sipgq00lacy7yk81crr8h7xfm4vs4h66w6rqsll8i7di19g13cj"; depends=[devtools magrittr miniUI rstudioapi shiny SpaDES_core stringi]; }; - SpaDES_core = derive2 { name="SpaDES.core"; version="0.1.1"; sha256="12w2yr4q440n68p4gcj82h7gzjd240khfxjwxpngfbhbgp7rmv4b"; depends=[crayon data_table DEoptim DiagrammeR digest dplyr fastdigest fpCompare httr igraph lubridate quickPlot R_utils raster RCurl reproducible sp stringi]; }; - SpaDES_tools = derive2 { name="SpaDES.tools"; version="0.2.0"; sha256="1xqydiswjg8dn57d0lmfll1ix6ca7w969swpyhwrqkh7x17q9bvg"; depends=[bit checkmate CircStats data_table fastmatch ff ffbase fpCompare magrittr quickPlot RandomFields raster Rcpp reproducible sp velox]; }; + SpaDES_core = derive2 { name="SpaDES.core"; version="0.2.2"; sha256="17p4fvyax5zxvw1h79n7ybx5vhq1gawyk0dib3y055kr1vv95h0s"; depends=[codetools crayon data_table DEoptim DiagrammeR dplyr fastdigest fpCompare googledrive httr igraph lubridate quickPlot R_utils raster RCurl reproducible stringi]; }; + SpaDES_tools = derive2 { name="SpaDES.tools"; version="0.3.0"; sha256="110c8y6v6pig6bpzn82kzaxr4c2jlq83v1a9ml1n9af591mpw4gp"; depends=[bit checkmate CircStats data_table fastmatch ff ffbase fpCompare magrittr quickPlot RandomFields raster Rcpp reproducible sp velox]; }; SpaTimeClus = derive2 { name="SpaTimeClus"; version="1.0"; sha256="1l204b8yd11pxwcb026xy39f4lps4sqk6mml8cybnjch8clk9djc"; depends=[Rcpp RcppArmadillo]; }; SpadeR = derive2 { name="SpadeR"; version="0.1.1"; sha256="0iy2rkq4vvps1a73kqq37zpsyl4pvl3vh07dwvpfhvp7f8nxbx99"; depends=[]; }; SparseDC = derive2 { name="SparseDC"; version="0.1.17"; sha256="0gsfj8631s67a0r9qjjll4rbb57nzk5fwm5bbggvf0027b9hk0pp"; depends=[]; }; SparseFactorAnalysis = derive2 { name="SparseFactorAnalysis"; version="1.0"; sha256="0lgfvydxb86r5hks1mf0p0yhgpx8s8fbkc3q6dimc728rw26qcv5"; depends=[directlabels ggplot2 MASS proto Rcpp RcppArmadillo truncnorm VGAM]; }; SparseGrid = derive2 { name="SparseGrid"; version="0.8.2"; sha256="057xbj2bhjm9i32kn39iscnqqdsvsmq0b8c92l8hnf9avf1sx10x"; depends=[]; }; - SparseLearner = derive2 { name="SparseLearner"; version="1.0-2"; sha256="1qxycxpch2m2yyk97210gdzsizhlinc0hkhk5ak00rdgkrsxxc0k"; depends=[glmnet lqa mlbench qgraph RankAggreg SIS SiZer]; }; + SparseLPM = derive2 { name="SparseLPM"; version="1.0"; sha256="1mpjf7yk2haa8hch315davb6nrhxhy0w2vgw2x4111rn4bskhd8m"; depends=[gtools Rcpp RcppArmadillo vegan]; }; SparseM = derive2 { name="SparseM"; version="1.77"; sha256="0p6ljma2h12cq1xmy0cxb48ih8dhxxbnwkqzvx3cckxf2kprycm9"; depends=[]; }; + SparseMDC = derive2 { name="SparseMDC"; version="0.99.5"; sha256="0d3ashk3l9fjdbiyjhaxc05ayyscissrg7lwhnh46hv3fydbixlj"; depends=[doParallel doRNG foreach]; }; SparseTSCGM = derive2 { name="SparseTSCGM"; version="2.5"; sha256="004hbk5fdd5b5hdvg25wl1908pfya26brm2pz00zypfvis99lps3"; depends=[abind flare glasso longitudinal MASS mvtnorm network QUIC]; }; SpatEntropy = derive2 { name="SpatEntropy"; version="0.1.0"; sha256="0nk399anjhsdki9cra650ynk6sa0366495470sawxcfs3vxmlzrl"; depends=[spatstat]; }; SpatMCA = derive2 { name="SpatMCA"; version="1.0.1.0"; sha256="1sjrm1md4lmhyq1yw3np4llkgdskw3mk667jr0k3isjmr6z88gxa"; depends=[fields MASS Rcpp RcppArmadillo RcppParallel]; }; @@ -3688,17 +3837,20 @@ in with self; { SpatialPack = derive2 { name="SpatialPack"; version="0.3"; sha256="12mx62drwqx351x4jfvv87rxr28ggz7iw83firkzr5xwfwfgr02c"; depends=[]; }; SpatialPosition = derive2 { name="SpatialPosition"; version="1.2.0"; sha256="140fg3bjj7383nrdbgnk9lccj4yjq65rkprqpmf4q0mwbc89mmqc"; depends=[raster rgdal rgeos sp]; }; SpatialTools = derive2 { name="SpatialTools"; version="1.0.4"; sha256="0jgbrzsx2klvihv65y1ycqyr8awp5kqqz4qwfyfibx3b56lzna1q"; depends=[Rcpp RcppArmadillo spBayes]; }; + SpatialVS = derive2 { name="SpatialVS"; version="1.0"; sha256="0f0ps462g3v1h50fa9sznzvjdasb4lcs57ccsc02l39jlkwp7z56"; depends=[fields MASS nlme]; }; SpatialVx = derive2 { name="SpatialVx"; version="0.6-3"; sha256="0shh8b4l42h93ja6mshj2bwfz1g5j6wjwf3n3ql4yx7kc0n1y7sv"; depends=[boot CircStats distillery fastcluster fields maps smatr smoothie spatstat turboEM waveslim]; }; SpatioTemporal = derive2 { name="SpatioTemporal"; version="1.1.9"; sha256="1k674xb6q64w9izjb2mdippp6sfjnlqlq6ynmzmyi8m3pv3spga6"; depends=[MASS Matrix]; }; Spbsampling = derive2 { name="Spbsampling"; version="1.0.0"; sha256="19ci3199hwqzh82phxr4m4d1n7y3vpn5338m20qisr7plwqv7wp5"; depends=[Rcpp Rdpack]; }; + SpecDetec = derive2 { name="SpecDetec"; version="1.0.0"; sha256="1940pl4vm1kzszq0hwhqkwbk1xmrimjdf03acpdndy089mdg9avc"; depends=[abind]; }; SpecHelpers = derive2 { name="SpecHelpers"; version="0.2.7"; sha256="1v3v717ah2fkx9225860dwppdf5m6nnnaaa4iwmj30rn17nqr4jh"; depends=[gsubfn splancs]; }; SpeciesMix = derive2 { name="SpeciesMix"; version="0.3.4"; sha256="0d6hfmzxqcvg4fcvpsfxx36k95fwkws4rlylrixikndj2fncgwb5"; depends=[MASS numDeriv]; }; SpecsVerification = derive2 { name="SpecsVerification"; version="0.5-2"; sha256="0dnya9mzkf48clp51jrnkz6lc4fps38nn3lap7n2wcp3dvbvdycg"; depends=[Rcpp RcppArmadillo]; }; SpectralMap = derive2 { name="SpectralMap"; version="1.0"; sha256="15689023k9jzg3s7bx5m97dmn00z876amqhxsxksy8n8wf09wr57"; depends=[fields scatterplot3d]; }; SphericalCubature = derive2 { name="SphericalCubature"; version="1.4"; sha256="14xrxhmhavz82rcixnyharnbrvdzs6rh7gbxihaxh431d90w2q3k"; depends=[abind cubature mvmesh SimplicialCubature]; }; SphericalK = derive2 { name="SphericalK"; version="1.2"; sha256="18py4ylm10s75pihjvcy7w948379zy9l9azriw7g7pyp7px29wda"; depends=[]; }; + SplitSoftening = derive2 { name="SplitSoftening"; version="1.0-0"; sha256="1nng2rbldpxflnn7kqdp4r334lcjyznwbc50sfrd4rxyhcmmy36n"; depends=[]; }; SportsAnalytics = derive2 { name="SportsAnalytics"; version="0.2"; sha256="1vb080ak1mfvr6d0q9i3r8hd547ba80bavjdcri0gclqqcjf1ach"; depends=[]; }; - SqlRender = derive2 { name="SqlRender"; version="1.5.0"; sha256="0g9x7dkks9jcgfqz1zzkvgzgjlj2bvlbnpk1k6zc2lplxp7hgzf7"; depends=[rJava]; }; + SqlRender = derive2 { name="SqlRender"; version="1.5.2"; sha256="07x9jrrr7j6vi8blnl0byry0yh11fnf0zy9137zc4nmnp240fawv"; depends=[rJava]; }; Sstack = derive2 { name="Sstack"; version="1.0.1"; sha256="137vsas2kw3l37c141g51sgx0j6z8ys6hbxjmsdymz1fxsjr4adg"; depends=[doParallel dplyr foreach randomForest]; }; StAMPP = derive2 { name="StAMPP"; version="1.5.1"; sha256="0yyssscx3l4csban66gb4q35h37gf7pqvvycfsy56n96pnnlrgkf"; depends=[adegenet doParallel foreach pegas]; }; StMoMo = derive2 { name="StMoMo"; version="0.4.1"; sha256="1c4v2gjipq1y4crc6bqvz2x5c02bl10mh9jacg8dqb2dffsh5y44"; depends=[fanplot fields forecast gnm MASS RColorBrewer reshape2 rootSolve]; }; @@ -3708,7 +3860,7 @@ in with self; { Stack = derive2 { name="Stack"; version="2.0-1"; sha256="09fgfhw9grxnpl5yg05p9gvlz38iw4prns1jn14nj3qx01k5rnxb"; depends=[bit ff ffbase plyr stringr]; }; StagedChoiceSplineMix = derive2 { name="StagedChoiceSplineMix"; version="1.0.0"; sha256="1008gm6zv5k8lpv0qg42qjriajmx0n4kshjh76mvx91dpi788ivh"; depends=[plyr]; }; StakeholderAnalysis = derive2 { name="StakeholderAnalysis"; version="1.2"; sha256="164mah8h8izxaqp8hc43l6mlnf95pydkcx2laqrlqr9b0bybadxb"; depends=[]; }; - StanHeaders = derive2 { name="StanHeaders"; version="2.17.2"; sha256="11fcc59z63rkgk6pp5vhb5avjlbhbjs2v5mn496ai9jms4223ivc"; depends=[]; }; + StanHeaders = derive2 { name="StanHeaders"; version="2.18.0"; sha256="1h2g4j3ja71szvmwxp5c38s64zf1iamxpjlhkbc40jvw9fhbfc15"; depends=[]; }; StandardizeText = derive2 { name="StandardizeText"; version="1.0"; sha256="0s267k2b109pcdiyd26gm4ag5afikrnnb55d3cs6g2fvzp744hfp"; depends=[]; }; Stat2Data = derive2 { name="Stat2Data"; version="1.6"; sha256="0pk68ffc6ffpddfpf9wi8ch39h6k3r80kldld3z5pnql18rc8nvx"; depends=[]; }; StatCharrms = derive2 { name="StatCharrms"; version="0.90.91"; sha256="0gjxp6jz8j2kz87g17gax1pyrd498vcswrmv9az5dj52dvyxbwxf"; depends=[cairoDevice car clinfun coxme gWidgets gWidgetsRGtk2 lattice multcomp nlme R2HTML RGtk2 RSCABS survival]; }; @@ -3719,12 +3871,12 @@ in with self; { StatPerMeCo = derive2 { name="StatPerMeCo"; version="0.1.0"; sha256="1nm6brlj6h7jx8nqagrfk294ay3pfmkiizabwlb87qfnsfwchpk3"; depends=[]; }; StatRank = derive2 { name="StatRank"; version="0.0.6"; sha256="14d8v3bp8vgksi6q0mxajwd9s8zi6lns3qwi1vcr5xp9rjp4n6iy"; depends=[ggplot2 plyr truncdist]; }; SteinIV = derive2 { name="SteinIV"; version="0.1-1"; sha256="1bm4lc7g9h9jkb1dpzb84289bwxcywp0a8vylv6ipvhiqbqk5d95"; depends=[]; }; - SteinerNet = derive2 { name="SteinerNet"; version="3.0.0"; sha256="1inm36mrxsiczh9i69gbx4d0y39ccgzrjkgdp3p2a1mv0dgzvwbi"; depends=[igraph]; }; + SteinerNet = derive2 { name="SteinerNet"; version="3.0.1"; sha256="1jkvv0hsj85i1zfr1bmdsrbwgl11mxpfci3z7997m5vvb5fb5cxn"; depends=[igraph]; }; Stem = derive2 { name="Stem"; version="1.0"; sha256="1fr02mi5qyxbqavdh2hg8ggw4nfjh3vs7g0vh834h6y0v53l71r5"; depends=[MASS mvtnorm]; }; StepReg = derive2 { name="StepReg"; version="1.0.0"; sha256="1ifdns1fpsjcbwcy19h5hxnd3an53qwba2a7gpn2571zb1phraz8"; depends=[Rcpp RcppEigen]; }; StepSignalMargiLike = derive2 { name="StepSignalMargiLike"; version="2.6.0"; sha256="0j85lvs2bljfhf482r31sq3xgk8l73hcw22wgxxp8z8nla38cwf9"; depends=[Rcpp]; }; StepwiseTest = derive2 { name="StepwiseTest"; version="1.0"; sha256="1fdm4s9l6grgd45r98ybbsh40rnmnn16c0id6lv28cpmssi0iphi"; depends=[Rcpp RcppArmadillo]; }; - StereoMorph = derive2 { name="StereoMorph"; version="1.6.1"; sha256="1q0fif4azv8nd37smhmr61mr4fls1jpm1ky40aqlv6kjm336pn1c"; depends=[bezier jpeg png Rcpp rjson shiny svgViewR tiff]; }; + StereoMorph = derive2 { name="StereoMorph"; version="1.6.2"; sha256="1jjvkwln9kkjgyg1vn9ma6ffi32cxbkfh6zn69vilbdkmjcsycl2"; depends=[bezier jpeg MASS png Rcpp rjson shiny svgViewR tiff]; }; StockChina = derive2 { name="StockChina"; version="0.3.1"; sha256="1myxyfchnkskyqb5yciw1wfk3006f51y89ipzfjzdlfyzwy1lsp1"; depends=[]; }; Storm = derive2 { name="Storm"; version="1.2"; sha256="1fg8y9my9yp6px1gh43mr3m2s2z262mzq03pj52mqg3n186vk8z3"; depends=[permute rjson]; }; StrainRanking = derive2 { name="StrainRanking"; version="1.2"; sha256="1r8avm9xajqmsy4x7pgh1yaffq7wl5i5kg75kdilydwmii6n19i0"; depends=[]; }; @@ -3741,31 +3893,32 @@ in with self; { SubLasso = derive2 { name="SubLasso"; version="1.0"; sha256="12m7ynlqhikjhavd12bhsd04s9cpv8aq5xgm875i10mb3ldpd1bd"; depends=[glmnet gplots psych]; }; SubTite = derive2 { name="SubTite"; version="2.0.3"; sha256="1i95f3x1nkhx9kqzxwvi15x6yq7mcdihzjxh60la6jvq5nscfi3l"; depends=[Rcpp RcppArmadillo]; }; SubVis = derive2 { name="SubVis"; version="2.0.2"; sha256="1nb3zgm6i5lwfwdrn8mk3wkg8a4ldfvs27ai8v46l4316qc1fa9p"; depends=[Biostrings shiny]; }; + SubgrPlots = derive2 { name="SubgrPlots"; version="0.1.0"; sha256="0bhrb82yck4q72r268wqcnz2cm0sss92zff580s5jjijc2cwh3cp"; depends=[alluvial circlize colorspace diagram dplyr geoR ggplot2 gridBase gridExtra plyr polyclip scales shape sp survival survRM2 UpSetR VennDiagram]; }; SubgrpID = derive2 { name="SubgrpID"; version="0.11"; sha256="1by23gdkbls7l5xa9nl055nbm0d3138pmfmasqmcy42h62wf7dw6"; depends=[AIM ggplot2 glmnet Matrix rpart survival]; }; SubpathwayGMir = derive2 { name="SubpathwayGMir"; version="1.0"; sha256="1rw94idhbnaszr2xv1wgnjcxlnxkml912pvmqh2a1nqpwca5mscy"; depends=[igraph XML]; }; SubpathwayLNCE = derive2 { name="SubpathwayLNCE"; version="1.0"; sha256="051csjavr9549y54yirfdn266i7swsvpbcakhziyz4sl4afwx5kl"; depends=[BiasedUrn graph igraph RBGL]; }; Sunclarco = derive2 { name="Sunclarco"; version="1.0.0"; sha256="0jv92a4ciwkm0wa4irgb6ql3vf6v6p24fmbnk24pqp5p8drp8g5v"; depends=[survival]; }; Sunder = derive2 { name="Sunder"; version="0.0.4"; sha256="1na41nnscyc4v1qbwzfgqk503r39xxbi6f446pscrz3v0v121f1a"; depends=[mnormt]; }; SunterSampling = derive2 { name="SunterSampling"; version="1.0.1"; sha256="0qfld3j8xlpgp7c58zqw6gzm38m4d740lvdj5vmcflfcc6ja98sf"; depends=[]; }; - SuperExactTest = derive2 { name="SuperExactTest"; version="1.0.0"; sha256="184s0pnwv9irqjlv24svfz3ami559ln03wjknyj67pwi4pfbzz87"; depends=[]; }; + SuperExactTest = derive2 { name="SuperExactTest"; version="1.0.4"; sha256="01839mp8g0hyrhsd2n37km0dlmq53f2x6mqnghjgycg6w3dd7jjm"; depends=[]; }; SuperGauss = derive2 { name="SuperGauss"; version="1.0"; sha256="1yqskaz4zsx87mcb9p7081h2lilaiwa3213yxlkyihyans7gnmp8"; depends=[fftw Rcpp RcppEigen]; }; - SuperLearner = derive2 { name="SuperLearner"; version="2.0-23"; sha256="04bsgxdczw5gr8mkyxgzrsawv2zfcab5jd85azac3m2n08402v44"; depends=[cvAUC nnls]; }; - SuperRanker = derive2 { name="SuperRanker"; version="1.1.0"; sha256="19cfz89557ygf5dvvqykmxcr72sfa0s2d37pplp6iwbhkl4wfw04"; depends=[prodlim Rcpp]; }; + SuperLearner = derive2 { name="SuperLearner"; version="2.0-24"; sha256="0hzgqhkj638dcrd4rwi1m37i0rjap2llz6zvf32jbcc5r2i5ixmd"; depends=[cvAUC nnls]; }; + SuperPCA = derive2 { name="SuperPCA"; version="0.1.0"; sha256="02kn3gvmlnn89pk054pmyxgkh5h1qf78fym0j3xagl3cq97h1js8"; depends=[fBasics glmnet MASS matlab matlabr Matrix matrixStats pracma psych R_matlab RSpectra spls timeSeries]; }; + SuperRanker = derive2 { name="SuperRanker"; version="1.1.1"; sha256="1yiklw9zk7yw0xz5g3lmyl5lv325fnysimdwbxa37nyj6qdfv0ls"; depends=[prodlim Rcpp]; }; SuppDists = derive2 { name="SuppDists"; version="1.1-9.4"; sha256="1ffx8wigqqvz2pnh06jjc0fnf4vq9z2rhwk2y3f9aszn18ap3dgw"; depends=[]; }; SurfaceTortoise = derive2 { name="SurfaceTortoise"; version="0.1.0"; sha256="0cw2nsqc9dx36svb49pqkmrxwk5hhbih206mwwkzfyavswxd2lpv"; depends=[gstat gtools raster rgdal rgeos sp]; }; - Surrogate = derive2 { name="Surrogate"; version="0.9"; sha256="10prqish36nvkipmagqqr5whq2qhy26nlm636i4kyj2iw3139xzg"; depends=[lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rgl rms survival]; }; + Surrogate = derive2 { name="Surrogate"; version="1.1"; sha256="1wmvr0wmhb0pfgn5rjq7v0zvkcy0bn01bqylbimkfrp5qlc2nf65"; depends=[extraDistr ks lattice latticeExtra lme4 logistf MASS mixtools msm nlme OrdinalLogisticBiplot rgl rms rootSolve survival]; }; SurrogateTest = derive2 { name="SurrogateTest"; version="1.0"; sha256="0dw8ic2rskwhj9f013q0j5my7qfsqihfis93frrlz4qag68jddqn"; depends=[survival]; }; SurvCorr = derive2 { name="SurvCorr"; version="1.0"; sha256="01rqdl503q1qnkn49iqnsjzis6azdsfi6s2hjky5k2zd6c9g18k5"; depends=[fields survival]; }; SurvDisc = derive2 { name="SurvDisc"; version="0.1.1"; sha256="0ajvnm0a4krbm0m584bg58hd7dzl0f2rz5as1zsajx8agywb5qmv"; depends=[cubature MASS mvtnorm nlme simex survival]; }; SurvGSD = derive2 { name="SurvGSD"; version="1.0.0"; sha256="0aa5zaf9akkqkxs8iqwnm93sfwakhhhs3qfafbk0vrwmb5yvzzm1"; depends=[flexsurv ldbounds mnormt]; }; SurvLong = derive2 { name="SurvLong"; version="1.0"; sha256="000ywg0sdk9kailiy7ckhq4mkaawl9hh88w6apj5khgpxsyj8aw3"; depends=[]; }; - SurvRank = derive2 { name="SurvRank"; version="0.1"; sha256="1i08yjprzd9irs46rifa5fsmmhwbsf4py0m8qp5rprznyr8504y3"; depends=[doParallel foreach ggplot2 glmnet gplots ipred mboost randomForestSRC reshape rpart sampling survAUC survival]; }; SurvRegCensCov = derive2 { name="SurvRegCensCov"; version="1.4"; sha256="0ipr7lajnrklk963lrlgx946l6r191q3bfif4njkdmw0x797nzm2"; depends=[numDeriv survival]; }; + SurvTrunc = derive2 { name="SurvTrunc"; version="0.1.0"; sha256="0b6s7llljp75agd57lmc1yq5acnfwy113khrfjcbm1l5ply6pz7f"; depends=[survival]; }; Survgini = derive2 { name="Survgini"; version="1.0"; sha256="1gxkdv2j1njbgnwb52vyhz7p2lrcg3hp6sry3kyhp4wkvf6gnhxi"; depends=[survival]; }; SvyNom = derive2 { name="SvyNom"; version="1.1"; sha256="1jym2x6nd9a3y7nk5hflqpy54gs67y4sqqspkvkalf5l2cc64did"; depends=[Hmisc rms survey survival]; }; SwarmSVM = derive2 { name="SwarmSVM"; version="0.1-4"; sha256="1b0h1jfywsrfdj8dkbnlzvh7654rycagxij9jbzb65g6swss6ajx"; depends=[BBmisc checkmate e1071 kernlab LiblineaR Matrix SparseM]; }; - SweaveListingUtils = derive2 { name="SweaveListingUtils"; version="0.7.7"; sha256="04yxhphf069y29b40i34kr4hvlcv8kgr6kqc2vdz2a40564fdsjb"; depends=[startupmsg]; }; - SwissAir = derive2 { name="SwissAir"; version="1.1.4"; sha256="1avc32q7nbwjkcbml7z05car6khv1ghcz3miw0krm8i53w032c6f"; depends=[]; }; + SwissAir = derive2 { name="SwissAir"; version="1.1.5"; sha256="0lh69924vhyilgn562jqn8m7z4dq3xmdj09501sbs7hbxfaiiyly"; depends=[]; }; SyNet = derive2 { name="SyNet"; version="2.0"; sha256="0mb9dscddkvmkf7l3bbcy4dlfmrvvy588vxdqy5dr783bpa5dkiw"; depends=[tkrplot]; }; SymTS = derive2 { name="SymTS"; version="1.0"; sha256="17vhm00zd9yxl6li36bsfkm4rsizjsm93ibrzgqnkl72sqmmlwfi"; depends=[]; }; SympluR = derive2 { name="SympluR"; version="0.3.0"; sha256="0a3irbk5bh3af8rv4l4sh3ymj3icyqjv5akzmx6rrp6pr3mgq6c6"; depends=[httr jsonlite plyr readr]; }; @@ -3774,25 +3927,26 @@ in with self; { SynchWave = derive2 { name="SynchWave"; version="1.1.1"; sha256="127hllvig8kcs9gr2q14crswzhacv6v2s4zrgj50qdyprj14is18"; depends=[fields]; }; Synth = derive2 { name="Synth"; version="1.1-5"; sha256="1cfvh91nz6skjk8jv04fhwv3ga9kcsfgq3mdy8lx75jkx16zr0pk"; depends=[kernlab optimx]; }; T2EQ = derive2 { name="T2EQ"; version="1.1"; sha256="1skkkryw63pfx1xslia1lczb2psja6v6hcbph4isdcksb4l4pcig"; depends=[]; }; - TAM = derive2 { name="TAM"; version="2.12-18"; sha256="1mbhf5ni2a1mlyh8qa7id3p0h1baqigmh5ch2yf18h8mn52ig47i"; depends=[CDM coda MASS mvtnorm Rcpp RcppArmadillo sfsmisc]; }; + TAM = derive2 { name="TAM"; version="2.13-15"; sha256="0c13327dp2whnmns0k53f5rc2cz60kjhdh6nq4q021yhm2j4xd81"; depends=[CDM coda MASS mvtnorm Rcpp RcppArmadillo sfsmisc]; }; TANDEM = derive2 { name="TANDEM"; version="1.0.2"; sha256="1h6m6aq2b5m9gdy4nck4dxv75gv50pfdhxx8xifgyv0d7n8czabq"; depends=[glmnet Matrix]; }; TANOVA = derive2 { name="TANOVA"; version="1.0.0"; sha256="0c2mrahchwagisrkjl5l1s0mv0ny80kngq8dz0fjj9lwxwqwvwa5"; depends=[MASS]; }; TAQMNGR = derive2 { name="TAQMNGR"; version="2018.5-1"; sha256="0bf0sgqa53l9y2bhwg2ngiwlcgrmj0nvxchlsmcc8zin388qf4pb"; depends=[Rcpp]; }; TAR = derive2 { name="TAR"; version="1.0"; sha256="0wjh2n9x3yn9by9a6mjvkl96qy7z549g6dsqp7b4d96xwmyqxlbv"; depends=[mvtnorm]; }; TBEST = derive2 { name="TBEST"; version="5.0"; sha256="15piy507vv8x59xgga17splxszy0vm87qjbfgxycvba633jishsa"; depends=[fdrtool signal]; }; - TBFmultinomial = derive2 { name="TBFmultinomial"; version="0.1.1"; sha256="0cwga4pkfz4azm62v54jql07ymkhm97wyccz4gg6mhwy4qzigyjq"; depends=[nnet plotrix stringr VGAM]; }; + TBFmultinomial = derive2 { name="TBFmultinomial"; version="0.1.3"; sha256="0cd0dr8vkf0sfriaafp2x63dilxmirm0fljxm82zw77c9j5ly3kv"; depends=[nnet plotrix stringr VGAM]; }; TBSSurvival = derive2 { name="TBSSurvival"; version="1.3"; sha256="1r87qvnlvc18i12yi25lfpdb8b5p33fywi38hs2xp1y2vbvz5s9b"; depends=[BMS coda mcmc normalp R_utils Rsolnp survival]; }; TCGA2STAT = derive2 { name="TCGA2STAT"; version="1.2"; sha256="15a5lh0nrdcxdwj7wj5m9rsvk1ygpp6wdjb4swilk91rb1lblikv"; depends=[CNTools XML]; }; TCGAretriever = derive2 { name="TCGAretriever"; version="1.3"; sha256="0mi8j7k2b1sx75ka8ympydqpk8jqp8wz8dyf4vk4776fra7bq24p"; depends=[httr]; }; TCIApathfinder = derive2 { name="TCIApathfinder"; version="1.0.2"; sha256="1fgjmz297jckdb0xsly1scq5n8y8awfgdkr4yfml4lim2mkdsigx"; depends=[httr jsonlite]; }; - TDA = derive2 { name="TDA"; version="1.6.2"; sha256="1vkb4d3ayw8y4iskd6y1y9hnp0baidaxiqjqydxv2jwkdx0x9c3z"; depends=[BH FNN igraph Rcpp RcppEigen scales]; }; + TDA = derive2 { name="TDA"; version="1.6.4"; sha256="0ni8lmdsf2q36rrgq3ay382m12834agfcw5rlqfa7fbqgmy4c9xs"; depends=[BH FNN igraph Rcpp RcppEigen scales]; }; TDAmapper = derive2 { name="TDAmapper"; version="1.0"; sha256="0cxgr2888v8azgdr3sg4vlcdyivkrxkk6dsp1ahv4frrwvg2z09k"; depends=[]; }; + TDAstats = derive2 { name="TDAstats"; version="0.3.0"; sha256="11g9yfgimkyl9z8kvzlvgkwc61vhdgvp6zy2izdbj18fxyqmcn3s"; depends=[ggplot2 Rcpp]; }; TDCor = derive2 { name="TDCor"; version="0.1-2"; sha256="18085prcwhl5w717f1f7jcqskw2jvigvjjs2l5y6106ibiam6hxx"; depends=[deSolve]; }; TDD = derive2 { name="TDD"; version="0.4"; sha256="193y8brybkjsajrbnlx1sdnw1wyyn9rhlm5wvp4aamqhvi8z13vn"; depends=[pracma RSEIS signal]; }; TDMR = derive2 { name="TDMR"; version="2.0"; sha256="1dqyi7i4spacg0n6f3zdhyb84crlbqvkb8xdmvdjr1jd1zx5gc32"; depends=[adabag SPOT testit twiddler]; }; TDPanalysis = derive2 { name="TDPanalysis"; version="0.99"; sha256="1kyhs4rpkm3gr55l6hrz4xcb9igk95si1m1sp175580k16n885z0"; depends=[plyr]; }; TDboost = derive2 { name="TDboost"; version="1.2"; sha256="0sc9vby4892gm5b5h8gbdl4misqvgbkfp8fms53dk83malxkw1zx"; depends=[lattice]; }; - TE = derive2 { name="TE"; version="0.2-2"; sha256="1yy6ky11ijnnkz2a4g6lww870pb4himn9nx230jnxpr0q8nsfqpb"; depends=[MASS rainbow]; }; + TE = derive2 { name="TE"; version="0.3-0"; sha256="15530a5qjlh74c1qji76j25mm4c59gifp34y066f8j21f70rahfs"; depends=[MASS rainbow]; }; TED = derive2 { name="TED"; version="1.1.1"; sha256="0nb2arx7c1m8ymnkmj3jwbcw23vhkr1f3vlym2hqs0pq0lnsl4g0"; depends=[animation fields foreach geoR RcppArmadillo zoo]; }; TEEReg = derive2 { name="TEEReg"; version="1.1"; sha256="0v5qz3vvmcm3fh16kjb05j1r0yj23r7hrxf2www20ng3dmga5q0f"; depends=[]; }; TELP = derive2 { name="TELP"; version="1.0"; sha256="0wzm3dz0489ha7dd6lkashvvjydck9jw2pavlx9plpksvzr4q9ph"; depends=[arules arulesViz ggplot2 gridExtra RColorBrewer tcltk2 tm wordcloud]; }; @@ -3800,26 +3954,26 @@ in with self; { TERAplusB = derive2 { name="TERAplusB"; version="1.0"; sha256="0mshx615awcf2arm39mgw2gzgpyn7a3f767484g7z4nqqlikwpgc"; depends=[]; }; TESS = derive2 { name="TESS"; version="2.1.0"; sha256="05xsz2v847pwj4ja7hmg3zfbfqrwwzpf0ri0gjzb8snm2a7xm23y"; depends=[ape coda deSolve Rcpp]; }; TExPosition = derive2 { name="TExPosition"; version="2.6.10"; sha256="12rgijlclaipwjjiyng7nwilzixdy6lsvncigcg0vjydhgk97jn1"; depends=[ExPosition prettyGraphs]; }; - TFDEA = derive2 { name="TFDEA"; version="0.9.8.3"; sha256="0qg4nhlqqj7hc8lg732zz8klbbp3yksnq8q8n4ml3jz8gadrpyj7"; depends=[lpSolveAPI]; }; TFMPvalue = derive2 { name="TFMPvalue"; version="0.0.8"; sha256="0h9qkl15k8v17v3g9bdnfwvh2s04ywjgg5y0xn2077dmywlja1bd"; depends=[Rcpp]; }; TFX = derive2 { name="TFX"; version="0.1.0"; sha256="0xrjdbvg0ng4i0s8ql1pfyma10x4n045spilkb05750677r5j44p"; depends=[XML]; }; TFisher = derive2 { name="TFisher"; version="0.2.0"; sha256="0vz74ww1lf1prfwz74hfsi3a8nzq8ss7aqjr85c1d87vss2796xx"; depends=[Matrix mvtnorm sn]; }; - TH_data = derive2 { name="TH.data"; version="1.0-8"; sha256="17csnwyk2f3d47nghkfy9wly5kff8zhdcfwfml7509hjrjgi13s7"; depends=[MASS survival]; }; + TH_data = derive2 { name="TH.data"; version="1.0-9"; sha256="03xfvww0krw0fn76qmmvrj7dx4shin57qafwhkrggfg25hbqlcfq"; depends=[MASS survival]; }; TIMP = derive2 { name="TIMP"; version="1.13.0"; sha256="0b6g2afwjz2m7bnfhx1pjmq6x1ghjxgrwi6hz1l867qa4i2yx5hx"; depends=[colorspace deSolve fields gclus gplots minpack_lm nnls]; }; TITAN2 = derive2 { name="TITAN2"; version="2.1"; sha256="0cxcgkf776411ln5wbfdyjxa42jw473vcq1kns6k6p8dpm1y91c2"; depends=[]; }; TInPosition = derive2 { name="TInPosition"; version="0.13.6"; sha256="1cxxrfpbiyknaivv6gyp79lz0rxwhrndcd054smksxq8zcfz0v7c"; depends=[ExPosition InPosition prettyGraphs TExPosition]; }; TKF = derive2 { name="TKF"; version="0.0.8"; sha256="1db87lwx26ayv1x2k8qd9dfr6j3jkvdl9ykisaxr42l6akqy21nr"; depends=[ape expm numDeriv phangorn phytools]; }; TLBC = derive2 { name="TLBC"; version="1.0"; sha256="08w187akbhfbz6nrrf7avf02lrhgj7bbrjmim9gkh4wlbjhzvw67"; depends=[caret HMM randomForest signal stringr]; }; - TLMoments = derive2 { name="TLMoments"; version="0.7.2.1"; sha256="1xgkbdnh79dj54jg5kf0c5kwykcvjaf4y16yyqf0vcc7aand6a3y"; depends=[hypergeo Rcpp]; }; + TLMoments = derive2 { name="TLMoments"; version="0.7.4"; sha256="0p3d4ydz22k5ardk8qr7sgfhg9qw655bjlbjckvzwps8cbxgnag3"; depends=[ggplot2 hypergeo Rcpp]; }; TLdating = derive2 { name="TLdating"; version="0.1.3"; sha256="12lmakk1zd6wqh1318pnl14i7km2hynjn4ymchfjr2bwmp45c1ra"; depends=[gplots Luminescence]; }; TMB = derive2 { name="TMB"; version="1.7.14"; sha256="0bpc504nz8xfwr8ack52dj4hpjcykn6zyf8n228z32dw9d5n96dl"; depends=[Matrix RcppEigen]; }; TMDb = derive2 { name="TMDb"; version="1.0"; sha256="0bbcmsv7b3vvskhdjww03gbcgql44vsvyjz2fajy9w2vgkr6ga90"; depends=[httr jsonlite]; }; TNC = derive2 { name="TNC"; version="0.1.0"; sha256="0639wvylmk9mapvmz79ij65g1phv3ylc683awi4pgaf9yfwlmjkn"; depends=[]; }; TOC = derive2 { name="TOC"; version="0.0-4"; sha256="1c16d4wrzir6v3c323sck6r9yz6mv1a70xamlj5ha1ydmfixcza9"; depends=[bit raster rgdal]; }; - TOSTER = derive2 { name="TOSTER"; version="0.3.3"; sha256="1b1zmg0klf26hajlf420vpf8yf47np2l6ccl6062jmakg37ngh00"; depends=[ggplot2 jmvcore R6]; }; + TOSTER = derive2 { name="TOSTER"; version="0.3.4"; sha256="1pxcvlw2nhh1sv0d662xc61rykf7kz7f4xjq3yrqf119gjcmps5s"; depends=[ggplot2 jmvcore R6]; }; TP_idm = derive2 { name="TP.idm"; version="1.5"; sha256="07rxn0mpar3p6blg8fd3kbvdngyz9h9n0r0lcljnfdajfzbysv7h"; depends=[]; }; TPD = derive2 { name="TPD"; version="1.0.0"; sha256="1fwj5l519mwsffm2pw2nbpm1mnlxkxzl53i7sqy810fccw47hgag"; depends=[ggplot2 gridExtra ks mvtnorm]; }; TPEA = derive2 { name="TPEA"; version="3.1.0"; sha256="1yyc3q4dyf4d8m7wi851dnxf3xnvvfnvj28kl8z8py4r4jsb2hfy"; depends=[foreach igraph Matrix MESS RCurl XML]; }; + TPMplt = derive2 { name="TPMplt"; version="0.1.0"; sha256="15jr2ww5vk6ac3h5bqdbsnch7fdn9c3vy5k3gdc271vf4cvghw93"; depends=[e1071 ggplot2 qpcR rgl rowr VBTree]; }; TPmsm = derive2 { name="TPmsm"; version="1.2.1"; sha256="1vynzb6qpp8785rdjyarhvwbkasviamhljjlnp4i0dds96wwdgx1"; depends=[KernSmooth]; }; TR8 = derive2 { name="TR8"; version="0.9.18"; sha256="14nfyqwqv1l5lr5zvywd5pxrv4qz0g5v5x8sdxkjbkxi9s7xrlaw"; depends=[gWidgets gWidgetstcltk plyr rappdirs RCurl readxl reshape taxize XML]; }; TRADER = derive2 { name="TRADER"; version="1.2-3"; sha256="1w9m2b866dyj82s118m64q8j9a1chpq2km2pnn9mfwwj8sivgdgn"; depends=[dplR]; }; @@ -3829,6 +3983,7 @@ in with self; { TRSbook = derive2 { name="TRSbook"; version="1.0.2"; sha256="0lj20i6gybinc196nzjfi6ayzmm970s9vp43lj60v96g5dl7qv1b"; depends=[gdata IndependenceTests RColorBrewer xtable]; }; TSA = derive2 { name="TSA"; version="1.2"; sha256="0gjfqibwdznz0nka95k4fjm935svxjpnqfywwz403crn2lh30h6q"; depends=[leaps locfit mgcv]; }; TSCS = derive2 { name="TSCS"; version="0.1.1"; sha256="0dllaw69rl26hgqac5q66k13gfmnxhn3wf0j8nx5xvi7yclzc3ay"; depends=[ggplot2 rgl tseries]; }; + TSEntropies = derive2 { name="TSEntropies"; version="0.9"; sha256="1bwb3kyhzc6sxhvpagf4vjmh8ghx44lpc9ms4jwrsrzdhcvnfc7l"; depends=[]; }; TSEtools = derive2 { name="TSEtools"; version="0.1.1"; sha256="1s39j41s5d9zakvr536l7m9f72yjh3cbfpd6pijvcr3n3dznmra9"; depends=[xts]; }; TSF = derive2 { name="TSF"; version="0.1.1"; sha256="0v3pq64yknp3n6lw6c87slv1avsv7rlb82gm670q4jzv5d174phv"; depends=[forecast fracdiff]; }; TSGSIS = derive2 { name="TSGSIS"; version="0.1"; sha256="0zrlin6xi6sv5qb18a0wi8lzldqlwa9lbwnra44w3jza3kakff7n"; depends=[glmnet MASS]; }; @@ -3856,10 +4011,10 @@ in with self; { TSrepr = derive2 { name="TSrepr"; version="1.0.1"; sha256="07gxsp4cfzpjmm6l9wpcdxar3sngm0ih0gp4c8gb6kyzm7pb780n"; depends=[dtt MASS mgcv quantreg Rcpp wavelets]; }; TSsdmx = derive2 { name="TSsdmx"; version="2016.8-1"; sha256="06h1iwgshiq4bvly5l1nrddrh2knc82z2aqxh8ls9ipbs7qjsvaf"; depends=[DBI rJava RJSDMX tframe tframePlus TSdbi]; }; TSsql = derive2 { name="TSsql"; version="2017.4-1"; sha256="0f71q6gqfx4r3ghsmr572cvkpmf2xf7kipf10ii99z1y23dxmsdn"; depends=[DBI tframe tframePlus TSdbi zoo]; }; - TSstudio = derive2 { name="TSstudio"; version="0.1.1"; sha256="1myvih5kd9pliczddjscqlq811dswqh9d8an8p5bi12h31w9pp30"; depends=[forecast lubridate magrittr plotly reshape2 xts zoo]; }; + TSstudio = derive2 { name="TSstudio"; version="0.1.2"; sha256="1wl902mmddcbd8xk35n4gcdy8gk7vrb3ii110mkvwkbxw463b40l"; depends=[bsts colormap data_table dplyr forecast forecastHybrid lubridate magrittr plotly RColorBrewer reshape2 scales viridis xts zoo]; }; TTAinterfaceTrendAnalysis = derive2 { name="TTAinterfaceTrendAnalysis"; version="1.5.4"; sha256="0r79qbmn4z9v4f4g737xs3mhc4dp6s6llkcz6c3hihwnq1vrvd7h"; depends=[e1071 lubridate multcomp mvtnorm nlme pastecs relimp reshape rkt tcltk2 zoo]; }; TTCA = derive2 { name="TTCA"; version="0.1.1"; sha256="16slr4c2nwbchsg6fk5prq22p2v4cjxzk93wd3xggav2lzrf8a5h"; depends=[MASS Matrix quantreg RISmed tcltk2 VennDiagram]; }; - TTR = derive2 { name="TTR"; version="0.23-3"; sha256="07r62ngyzjl4aszdxnr3n6bnbcgcap32yhd430jsilicg8n06di1"; depends=[curl xts zoo]; }; + TTR = derive2 { name="TTR"; version="0.23-4"; sha256="18mzyv6cmxmqyqsfwlx2b2k055887mfgc2jgj8xkn8c6m56n05zb"; depends=[curl xts zoo]; }; TTS = derive2 { name="TTS"; version="1.0"; sha256="0dhxj474dqjxqg0fc2dcx8p5hrjn9xfkn0rjn2vz3js92fa9ik9h"; depends=[mgcv sfsmisc]; }; TTmoment = derive2 { name="TTmoment"; version="1.0"; sha256="0a4rdb4fk1mqnvvz0r15kni0g5vcj4xkkcwwv7c2gxc94xh5i5ih"; depends=[mvtnorm]; }; TUWmodel = derive2 { name="TUWmodel"; version="1.0-1"; sha256="1q150r0m93cjj0q1qvn4drhgvhvvgb63d8iii5crhzjpqbdhyka7"; depends=[]; }; @@ -3869,20 +4024,23 @@ in with self; { TableToLongForm = derive2 { name="TableToLongForm"; version="1.3.1"; sha256="135q0bgsm2yndrg3vpwmihbqlyf3qkm97i0jvcw6bf06p6b2fk41"; depends=[]; }; TailRank = derive2 { name="TailRank"; version="3.2.1"; sha256="142m0cq9j8y5g9wh4plxya1jqi0dv6p6praxx3jb84kwqspi91xr"; depends=[Biobase oompaBase oompaData]; }; TanB = derive2 { name="TanB"; version="0.1"; sha256="05y9j1a5nzqfpsw48gix5c4ds1cm80liad9wnwmddhbx4fda6p32"; depends=[fdrtool pracma]; }; + TangPoemR = derive2 { name="TangPoemR"; version="0.1.0"; sha256="06w5gg36mx0vdagkhy7rskgjv2d3irr0d3nkjw26vxp25x1py4sf"; depends=[jiebaR]; }; TaoTeProgramming = derive2 { name="TaoTeProgramming"; version="1.0"; sha256="1b36s5mpm5vbhzcwmvm8g5pl7vpn6rsl5cnglfy8kgm1q9nnr7ff"; depends=[]; }; TapeR = derive2 { name="TapeR"; version="0.3.3"; sha256="0q5j7pn05z7hinwl5ypnrgh9ibsw6hvdfszjbnvavzab3bx8l6nn"; depends=[nlme pracma]; }; - Tariff = derive2 { name="Tariff"; version="1.0.3"; sha256="1z1yzy4f9k0zxa6zx1vp5axgjszics5wa8niy6087jz3r7y2bwph"; depends=[]; }; - TauP_R = derive2 { name="TauP.R"; version="1.1"; sha256="10sjvcv70fjrsl5nnk9gm4sy7nhwm6aaq57gr37cb10v079ykmk1"; depends=[]; }; + Tariff = derive2 { name="Tariff"; version="1.0.4"; sha256="1sf7qzv6cdx1k0h5cc2w1jbcpg07j02r5h31xcbsnsgd7wj3h3q1"; depends=[]; }; + TauP_R = derive2 { name="TauP.R"; version="1.5"; sha256="02vk9rj8yx4n2pihgk93bs2f9wkpkyfqm2kp7ixj4wpa29a0iq6v"; depends=[]; }; TauStar = derive2 { name="TauStar"; version="1.1.3"; sha256="06iq3kjbhyx2i8qlhvamnlch4j32psgw8q0wnvs4js513r6c0cqn"; depends=[Rcpp RcppArmadillo]; }; + TaxicabCA = derive2 { name="TaxicabCA"; version="0.1.0"; sha256="0mkw7d2pksj98kyg2951achmvsr0x7f4snq0kk1s5158b5yi5npn"; depends=[]; }; Taxonstand = derive2 { name="Taxonstand"; version="2.1"; sha256="0dvhiqggbv1by284fg38rcvvrxr9q3zp5gh51p1dh0129h73qj7i"; depends=[pbapply]; }; TcGSA = derive2 { name="TcGSA"; version="0.11.1"; sha256="072i04cp91v2ygarpqg8dlqqf8hia0ryambcv83fcchz9hzs2yx6"; depends=[cluster cowplot ggplot2 gplots GSA gtools lme4 multtest reshape2 stringr]; }; Tcomp = derive2 { name="Tcomp"; version="1.0.1"; sha256="1k0gsf3yr5n9zc2yi6szxm6s7bf61lz4fx8m3v48jlp5w900prwb"; depends=[forecast Mcomp]; }; - TeXCheckR = derive2 { name="TeXCheckR"; version="0.5.1"; sha256="18p3hyrrglgn2fdn5q9p1ayb58nznpdr5sy9mniybzsxrmfhghax"; depends=[clisymbols crayon data_table fastmatch hunspell hutils magrittr rstudioapi zoo]; }; + TeXCheckR = derive2 { name="TeXCheckR"; version="0.6.0"; sha256="1qrzslcipg3j1317dhizxhcxyx2dpx7jh91vkms10wgc6vpqgrw4"; depends=[clisymbols crayon data_table fastmatch hunspell hutils magrittr rstudioapi zoo]; }; TeachBayes = derive2 { name="TeachBayes"; version="1.0"; sha256="1mfhlkm7wp2i4hvc63xzfyw3q4z1xhlbi933pkqkbrhih94z4rz7"; depends=[dplyr ggplot2 gridExtra LearnBayes shiny]; }; TeachNet = derive2 { name="TeachNet"; version="0.7"; sha256="1p39bsf846r7zwz4lrrv2bpyx9yrkqzrnacajwrz3jjqj6qpp6cn"; depends=[]; }; TeachingDemos = derive2 { name="TeachingDemos"; version="2.10"; sha256="016pivvy8gzz8f3clnr5dg488rb1lf0l5s00c3v34gm1dgiw5x1f"; depends=[]; }; - TeachingSampling = derive2 { name="TeachingSampling"; version="3.2.2"; sha256="07c1wx7hl246kvj9ah55kdjpag8a9zbzh3jy0680w5nnv8vzsxxs"; depends=[]; }; - TempleMetrics = derive2 { name="TempleMetrics"; version="1.1.0"; sha256="02cs2dgcmxgz1y98x4rpq4l4khqvbnr0248s6rgrgq5l3z2s4qr0"; depends=[BMisc pbapply]; }; + TeachingSampling = derive2 { name="TeachingSampling"; version="3.4.2"; sha256="1r06if6ljlr9i3y5ri7akris97dsjy3n3n6sgz2dvy9szm4zsadp"; depends=[]; }; + TempleMetrics = derive2 { name="TempleMetrics"; version="1.2.0"; sha256="0g8a799grsjqyq55pnlgixyq2qxhvl5k01jcjwc08q54w2dg0xf0"; depends=[BMisc pbapply]; }; + Temporal = derive2 { name="Temporal"; version="0.1.1"; sha256="0x001apiph67cyh2ckx2k9mi6jb86agnmfvn94i27q9lpy4cn1sh"; depends=[expint numDeriv plyr Rcpp RcppEigen]; }; Ternary = derive2 { name="Ternary"; version="1.0.1"; sha256="0myppwcb4qvz9nkig641zrlf8yhy96qyg1yzh5nnli8a8xg0hjpk"; depends=[]; }; TestDataImputation = derive2 { name="TestDataImputation"; version="1.0"; sha256="07k4sgjda1gwdlx5rap5fhs5rww2ahzyf0fq98dsm99gvjajnmwn"; depends=[Amelia mice]; }; TestFunctions = derive2 { name="TestFunctions"; version="0.2.0"; sha256="018nkz8r6vqahrzq3d588i3ffb1bmd1pdk87j4ivcdsx99mq15sn"; depends=[]; }; @@ -3891,21 +4049,20 @@ in with self; { TexExamRandomizer = derive2 { name="TexExamRandomizer"; version="1.2.3"; sha256="0l0vpx4rkib2m8hwhwy9j8pqyf7gpb9qg8wpnh3238snwpadgy3a"; depends=[assertthat jsonlite Rcpp stringr]; }; ThankYouStars = derive2 { name="ThankYouStars"; version="0.2.0"; sha256="0r77ns3102wj1wvrfsa06l427imxyfhigpbs36cdxl2j87qrjzl6"; depends=[httr jsonlite]; }; ThermIndex = derive2 { name="ThermIndex"; version="0.2.0"; sha256="0s9d55577dq61qixwwfwmqc2k2c8my00j2ng97ng42cw0jc7aylm"; depends=[]; }; - Thermimage = derive2 { name="Thermimage"; version="3.1.0"; sha256="1gbbmmgmp6a8swl6kdfzf4kj9dpm17m809r2xrc58wg8gslx8m1c"; depends=[png tiff]; }; + Thermimage = derive2 { name="Thermimage"; version="3.1.1"; sha256="10jffqhqvy2is41cgzmkzrncqd65yjsyag8qli114s799qd9g3bm"; depends=[png roxygen2 tiff]; }; Thinknum = derive2 { name="Thinknum"; version="1.3.0"; sha256="0j48vgr4wsc2chm95aprq0xm0dk720xk5zmiijxasg92sfp0va6n"; depends=[RCurl RJSONIO]; }; ThreeArmedTrials = derive2 { name="ThreeArmedTrials"; version="1.0-0"; sha256="075cn99k06lgdd0cwl1i9242fcxwmd5malcyks0mmwjf9kzw00z2"; depends=[MASS numDeriv]; }; ThreeGroups = derive2 { name="ThreeGroups"; version="0.21"; sha256="0hipxa45v9ysb2qbk33kjycnvqar7bff1ajxd6fzhpc3jc9hflw4"; depends=[]; }; ThreeWay = derive2 { name="ThreeWay"; version="1.1.3"; sha256="17yl8zq029wiy3c0f4ssljx85dnm9n862wj2d24w7p0lxlvarmz6"; depends=[]; }; - Thresher = derive2 { name="Thresher"; version="0.12.3"; sha256="1lrydxrv67ga73bzxyvnibmggr9kixq2jb6as4cv35rm93vs5mrg"; depends=[ade4 ClassDiscovery colorspace MASS movMF oompaBase PCDimension]; }; + Thresher = derive2 { name="Thresher"; version="1.0.2"; sha256="06qc2dzapp78d27x855fc03k7p878bkv6b1ry4a9m23kmlvsyfi4"; depends=[ade4 ClassDiscovery colorspace MASS movMF oompaBase PCDimension]; }; ThresholdROC = derive2 { name="ThresholdROC"; version="2.6"; sha256="0ah102z6v9k5pxp3kbj5ffa9vhb7vi7axjkrg5qy5b4spnb71qsg"; depends=[MASS numDeriv pROC]; }; TickExec = derive2 { name="TickExec"; version="1.1"; sha256="0v0m0wi49yw0ply19vnirl2zwnk61sxalx24l8cadvkssgs13509"; depends=[]; }; TiddlyWikiR = derive2 { name="TiddlyWikiR"; version="1.0.1"; sha256="0vwwjdmfc8c0y2gfa8gls1mzvp29y39c9sxryrgpk253jj9px1kr"; depends=[]; }; TideCurves = derive2 { name="TideCurves"; version="0.0.3"; sha256="0wll0zbkfas6hs4h8ma5km68nv2brw1k75ngw5lrnxilya22lrgp"; depends=[chron data_table fields]; }; TideHarmonics = derive2 { name="TideHarmonics"; version="0.1-1"; sha256="1g1v99gh6mns4l8ipmw7kpalbk07m92ybcqjq7b0wsjmdvs1y67s"; depends=[]; }; TideTables = derive2 { name="TideTables"; version="0.0.2"; sha256="1grm9s9np7xs2d8gql4sgg72rxpxiidw6g1ni8q97qgqr7r3105l"; depends=[chron data_table]; }; - Tides = derive2 { name="Tides"; version="2.0"; sha256="0s7ja0vs8ag7myjq4kmza4ja9p76sdbbkaaamxbsgp9yaf02c6nf"; depends=[]; }; - TileManager = derive2 { name="TileManager"; version="0.2.0"; sha256="1zk5q1m3imlr9ms81jyb9kibm0m5zmiidsv86qgnqj8r4b8hpqyh"; depends=[APfun raster rgeos sp]; }; - TimeMachine = derive2 { name="TimeMachine"; version="1.2"; sha256="1dz0j777wmd8mpkm2ryiahpcw6w88w429zjcw6m67pi20r1992cb"; depends=[]; }; + Tides = derive2 { name="Tides"; version="2.1"; sha256="0da3z010ali83qf8mf1znicqv8vvsa5r93mc40ax60ln2w33nlrm"; depends=[]; }; + TileManager = derive2 { name="TileManager"; version="0.3.0"; sha256="1my9ljgr7j9qvgc2f2qj7d8m0yp0jq8xhq31jc6mnzbsppmr1q6n"; depends=[APfun raster rgeos sp]; }; TimeProjection = derive2 { name="TimeProjection"; version="0.2.0"; sha256="04yr4cg2khkw9n3y3qk0ni1327k4pxm09zz2xg8mpjdvgi4p9yi3"; depends=[lubridate Matrix timeDate]; }; TimeSeries_OBeu = derive2 { name="TimeSeries.OBeu"; version="1.2.2"; sha256="1a44fb29yacwgdiwaf5fpxzc5222cpi5mkv7l0dh43b6lh8f0j5k"; depends=[forecast jsonlite locfit trend tseries]; }; TimeVTree = derive2 { name="TimeVTree"; version="0.3.1"; sha256="124kg9zcq4b2j4qvg9f6gykbmzf69qjnnw54nv213ip2h4rdkv32"; depends=[survival]; }; @@ -3919,8 +4076,8 @@ in with self; { ToolsForCoDa = derive2 { name="ToolsForCoDa"; version="1.0.2"; sha256="0x05phwm6gqw1pmars1ypg86sggflffw9g2d0lc5gfsy93nrg0rv"; depends=[calibrate HardyWeinberg MASS]; }; TopKLists = derive2 { name="TopKLists"; version="1.0.6"; sha256="1hmm9g68scq8sqdb9axqn51p00mx6p6lw0fdgjljfi2q72xcqhq3"; depends=[gplots Hmisc]; }; TotalCopheneticIndex = derive2 { name="TotalCopheneticIndex"; version="1.0.0"; sha256="1w8irl49cxg0rsbk57cl443gmy4i3vrh3ialx9c9d08wc7d2zisa"; depends=[]; }; - TraMineR = derive2 { name="TraMineR"; version="2.0-8"; sha256="0x4ppghg7rbsj7q4q274vcs6kcwajjbi0s181r5qmzbxf20l8k9r"; depends=[boot cluster Hmisc RColorBrewer]; }; - TraMineRextras = derive2 { name="TraMineRextras"; version="0.4.2"; sha256="1k2s3syx27vma5k0qcfx2579jyaxmx7crizkvz3wplhzdwag7wbk"; depends=[cluster RColorBrewer survival TraMineR]; }; + TraMineR = derive2 { name="TraMineR"; version="2.0-9"; sha256="01sbf5dmy1bp0kqhn9xmf6kwjk3h6cgys28hzr61q4qxq5x0373f"; depends=[boot cluster Hmisc RColorBrewer]; }; + TraMineRextras = derive2 { name="TraMineRextras"; version="0.4.3"; sha256="1dmhq5fk2a7vj8s1cvmm7p9pc77z6m46hh7nqp0vkvm811l16v02"; depends=[cluster RColorBrewer survival TraMineR]; }; TrackReconstruction = derive2 { name="TrackReconstruction"; version="1.1"; sha256="1f2l3nshb6qrhyczw5rxqqzmsjxf0rvv3y78j8d9lv1nnd9kxzq5"; depends=[fields RColorBrewer]; }; Trading = derive2 { name="Trading"; version="1.1"; sha256="1mzqck9n14xp16vflx1sx8lry0wjmx37hqv76ldj21xnk5zbrgil"; depends=[]; }; TrafficBDE = derive2 { name="TrafficBDE"; version="0.1.0"; sha256="1lnh9lbjxaradivnd1dkd2szggjh2r4v7klpyxb862dxsmdxxrqw"; depends=[caret data_table dplyr lubridate neuralnet RCurl zoo]; }; @@ -3928,12 +4085,11 @@ in with self; { TrajDataMining = derive2 { name="TrajDataMining"; version="0.1.6"; sha256="1n5qcyc1kb8rdrqaji7pp63l2gyr6jim8spm8ydb4lnqfcnrin9g"; depends=[geosphere rgdal RPostgreSQL sp spacetime trajectories xts]; }; TransModel = derive2 { name="TransModel"; version="2.1"; sha256="0brlr4w5k8xsgbrizm7ha0cmq0kqzd2fcjpszq7gym844jj93csi"; depends=[MASS survival]; }; TransP = derive2 { name="TransP"; version="0.1"; sha256="0p6pfcp8qjdah0lfhx0a396nxjzp3ckpda9hl3snpppx79iyww55"; depends=[]; }; - TransferEntropy = derive2 { name="TransferEntropy"; version="1.4"; sha256="0620axdj6qyskf7xszrs8j5d2l73ns4bgbdg03fvr8i7jmq70zb8"; depends=[BH Rcpp]; }; TreatmentSelection = derive2 { name="TreatmentSelection"; version="2.1.1"; sha256="1pw64hx697jg2f1r2zd8y98g3ivj2gm8fnixcjfn4drsd0xixb4p"; depends=[binom ggplot2 survival]; }; TreeBUGS = derive2 { name="TreeBUGS"; version="1.4.0"; sha256="0xcipsfwghnf2x2x0i77vr79xs646v354skwxxw6m72ff6arbfz4"; depends=[coda hypergeo logspline MASS Rcpp RcppArmadillo rjags runjags]; }; - TreeDep = derive2 { name="TreeDep"; version="0.1.1"; sha256="0229ip18vbz36ks28p6pja30fb72qcdp7vwi2x0aiymhiigsmirs"; depends=[ggplot2 lubridate]; }; + TreeDep = derive2 { name="TreeDep"; version="0.1.2"; sha256="1li5h44crg7gb8589w6g2c1ms7jpk3x3nq378f66ihwhfdak3zn9"; depends=[ggplot2 lubridate]; }; TreePar = derive2 { name="TreePar"; version="3.3"; sha256="1sm518b1b4b1p0n5979qzvi2nacxpp3znbg9n75pf2a8z8wy6p4l"; depends=[ape deSolve Matrix subplex TreeSim]; }; - TreeSearch = derive2 { name="TreeSearch"; version="0.1.2"; sha256="0q25zw53whp1v57pkc50h2j7jb64jpip00s0qnmvdgncbrs4zhx5"; depends=[ape memoise phangorn R_cache Rdpack]; }; + TreeSearch = derive2 { name="TreeSearch"; version="0.2.0"; sha256="1zn2ig3iq5mfqs5gd31g1smm9vv1q68j1w9wpx4x4yxrwib35ghh"; depends=[ape colorspace gmp memoise phangorn R_cache Rdpack]; }; TreeSim = derive2 { name="TreeSim"; version="2.3"; sha256="1y98m2whpx9kssgklw2d6prs6af9vcn8yva1l7lm1l509py1fn6h"; depends=[ape geiger]; }; TreeSimGM = derive2 { name="TreeSimGM"; version="2.3"; sha256="0qwqvmmdn290llz5hmmx2q24jjmd1bxssrslzv31kzi1yq5h6w0b"; depends=[ape TreeSim]; }; TrendInTrend = derive2 { name="TrendInTrend"; version="1.1.2"; sha256="1kdjrzv2s5vpyg1lx6qkxj3dyi84qwhrvz17mx731f9pp70cz29j"; depends=[pROC rms]; }; @@ -3949,6 +4105,7 @@ in with self; { TukeyRegion = derive2 { name="TukeyRegion"; version="0.1.2"; sha256="03lik9vkah3hjhn0l4ci95v2h4q8mnziq006idipn69l4gmnddxl"; depends=[bfp BH ddalpha MASS Rcpp rgl Rglpk]; }; TunePareto = derive2 { name="TunePareto"; version="2.5"; sha256="0v1ylh4m5s80zp346pxxlvhm5070w83mlzfxjyp4n000c8r2nkf4"; depends=[]; }; TurtleGraphics = derive2 { name="TurtleGraphics"; version="1.0-8"; sha256="0h77pj7rs3lrqi1y2dm1cbrmj13mjpq6y5nw8bcq0s2kbnkfw67l"; depends=[]; }; + Tushare = derive2 { name="Tushare"; version="0.1.0"; sha256="0dcqj1jd9qslr1vn8s6s14nfrxjaxxcl53n87m1wzlqj94czmijq"; depends=[httr]; }; TwoCop = derive2 { name="TwoCop"; version="1.0"; sha256="1ycxq8vbp68z82r2dfg2wkc9zk3bn33d94xay20g2p55lnzl2ifd"; depends=[]; }; TwoPhaseInd = derive2 { name="TwoPhaseInd"; version="1.1.1"; sha256="0xsqiq4x7vmhif9j8zi1smbchwm4fsbgb10i4vxi0biijybizk9z"; depends=[survival]; }; TwoRegression = derive2 { name="TwoRegression"; version="0.1.2"; sha256="0qr9zrfmbh4c4207gvwa384q5njjx6nsl6lc58d25m8bkfalifpi"; depends=[data_table dplyr magrittr seewave]; }; @@ -3956,9 +4113,12 @@ in with self; { UBCRM = derive2 { name="UBCRM"; version="1.0.1"; sha256="1h9f8wlxdgb67qqqnfhd9gfs4l2cq84vajhcb0psva0gwdd1yf6i"; depends=[]; }; UBL = derive2 { name="UBL"; version="0.0.6"; sha256="0238irg7r3g248h4x4bdb308wvfqq99hwykywf4k2bssdd25kwjk"; depends=[automap gstat MBA randomForest sp]; }; UCR_ColumnNames = derive2 { name="UCR.ColumnNames"; version="0.1.0"; sha256="1nwwq93f60r9aik51l7mzckg81f81nz5kgzynyzp5sm4y2wmpzwn"; depends=[]; }; + UCSCXenaTools = derive2 { name="UCSCXenaTools"; version="0.2.5"; sha256="0vgjrmlscq4gcgccbabrcplbi1jyv5nd6zh1j57ys85f0w8mmvrl"; depends=[dplyr DT httr readr shiny shinydashboard]; }; + UKgrid = derive2 { name="UKgrid"; version="0.1.0"; sha256="1xfg2v82264wlvv6x0xppz7g7jka1y0d615g9rwcb236y64h2xrk"; depends=[data_table dplyr lubridate magrittr rlang xts zoo]; }; UNCLES = derive2 { name="UNCLES"; version="2.0"; sha256="0c61sm09dh0yfrjrjjnizg7qrf8xgc1zdldwhjh64kq8k8g5wa69"; depends=[class kohonen pdist]; }; UNF = derive2 { name="UNF"; version="2.0.6"; sha256="0sr740dhfp7z9wvhajww43g5gz79x5y5dbflw5a813jgmiqm1jyq"; depends=[base64enc digest]; }; UPMASK = derive2 { name="UPMASK"; version="1.1"; sha256="1qxajvld8g2mii12agypcm50fps9bai6d2wx6l0bv3srk80in7ai"; depends=[DBI MASS RSQLite]; }; + UPSvarApprox = derive2 { name="UPSvarApprox"; version="0.1.1"; sha256="1lm3xzj70s070ag2sk24nq5ayckk3mnqfmwppbhq5i4y13fw6vip"; depends=[]; }; USAboundaries = derive2 { name="USAboundaries"; version="0.3.1"; sha256="1mqbxkv347307mbvn70929bi3l8wmiwrp86rxdgy45g2ddjdcb6s"; depends=[]; }; USCF = derive2 { name="USCF"; version="0.1.3"; sha256="00ynxfd4lg8g4mspz5izxvgkj27l2i1cnp0z0dnkhsbxsg0161mj"; depends=[]; }; USGSstates2k = derive2 { name="USGSstates2k"; version="1.0.1"; sha256="11yk0pkss23j6fmmxnjkjm9p24ln343y4hijigbrbvcnb21wj2py"; depends=[sp]; }; @@ -3977,30 +4137,35 @@ in with self; { UniDOE = derive2 { name="UniDOE"; version="1.0.2"; sha256="14jz4acrvbv59sbr7gya8g0z749vv0i04gl5wl0y4218byjvw6bs"; depends=[Rcpp]; }; UniIsoRegression = derive2 { name="UniIsoRegression"; version="0.0-0"; sha256="0lmrmb9sbk41ak7sbcrzhfnijb1skgb4lqg9m9imc98lcp69h7z0"; depends=[Rcpp]; }; Unicode = derive2 { name="Unicode"; version="11.0.0-1"; sha256="1rjyz1d7xw9i1pzx0g653ymkr5hjcmri3dl8v0skzq13qc3fag3d"; depends=[]; }; + UnitCircle = derive2 { name="UnitCircle"; version="0.1.3"; sha256="0z5ssps8l5ka4aw4984qml15scw4pfssara5dls82afhfhpkszsr"; depends=[]; }; UnivRNG = derive2 { name="UnivRNG"; version="1.1"; sha256="0vjsqc1y24z7zlclglh55kkxjhy0dc5gjsy427zdv95j58jbxa66"; depends=[]; }; UpSetR = derive2 { name="UpSetR"; version="1.3.3"; sha256="08vj7l92b8fpqyqwxshll2mhk3yhgyr74axvr2lf29z78bapymhz"; depends=[ggplot2 gridExtra plyr scales]; }; UsingR = derive2 { name="UsingR"; version="2.0-6"; sha256="1lr8z45r5s7fxrd42rswm6w7s3k5nds244b9d525jb5v4n8w9kpw"; depends=[HistData Hmisc MASS]; }; V8 = derive2 { name="V8"; version="1.5"; sha256="155389k8laa48akg0bfsz65s4ddmpk0xpi1ha56z1sayv01vrrgc"; depends=[curl jsonlite Rcpp]; }; VAR_etp = derive2 { name="VAR.etp"; version="0.7"; sha256="0py5my3ilhcmz44m15hh0d219l9cz7rda4a9gbmf8wh9cgvvj1s3"; depends=[]; }; - VARSEDIG = derive2 { name="VARSEDIG"; version="1.7"; sha256="1vf0gqf81lbksp9m6yj28wsk5s29fqcfvlymy91hni814dkb1mxw"; depends=[]; }; + VARSEDIG = derive2 { name="VARSEDIG"; version="1.8"; sha256="10qkhi749z2hsywzdri6ari02x3ninprg1hj41fslvr7bjq2hn4z"; depends=[]; }; VARsignR = derive2 { name="VARsignR"; version="0.1.3"; sha256="09mnf9hvsi4wx1c81yq97mzggwk6s7nka7awrws63icjybqjmra9"; depends=[HI minqa mvnfast]; }; VARtests = derive2 { name="VARtests"; version="1.0.1"; sha256="19xmf4mg4v1fwd002ccinfbsbpcq9qfmzc2sf710mqv6i8ghv6jm"; depends=[Rcpp RcppArmadillo sn]; }; - VBLPCM = derive2 { name="VBLPCM"; version="2.4.4"; sha256="09b80313w2dljl009xzcfhdcl6flc8nqzw9pzgfbciwi61666ppb"; depends=[ergm mclust network sna]; }; - VCA = derive2 { name="VCA"; version="1.3.3"; sha256="03ibvn3a6bbgq36a1ibhi4givdnba6d0qcfbpbdxkz5masn1r23q"; depends=[lme4 Matrix numDeriv]; }; + VBLPCM = derive2 { name="VBLPCM"; version="2.4.5"; sha256="1q5n87zzakdv0mflgsy6a5lc25ryjm7h90i3nr0dvccd0l8d4wpm"; depends=[ergm mclust network sna]; }; + VBTree = derive2 { name="VBTree"; version="0.1.0"; sha256="0g0lyvclnfmd3zc8yhcibhli0hyxrba6wb3hx039fsg80q7y02h4"; depends=[tensorA]; }; + VCA = derive2 { name="VCA"; version="1.3.4"; sha256="1qyf20i6bgjg3lxivhx4kgr66m63wkzw8r26aqhz0cs1j0w741dk"; depends=[lme4 Matrix numDeriv]; }; VDA = derive2 { name="VDA"; version="1.3"; sha256="063mpwbyykx4f46wzfvrgnlq73ar7i06gxr4mjzbhqcfrsybi72b"; depends=[rgl]; }; VDAP = derive2 { name="VDAP"; version="2.0.0"; sha256="134x4aisaim72xkyzb1vb8vhl2m4i12yzh6cj858a1ag7b0ing3n"; depends=[drc ggplot2 reshape2 stringr]; }; VDSPCalibration = derive2 { name="VDSPCalibration"; version="1.0"; sha256="1hrmmhvk3mhd3bdl0msnm5shcj4cjgd3pn1rkfkv8fh4llqvz7w8"; depends=[]; }; - VGAM = derive2 { name="VGAM"; version="1.0-5"; sha256="0ik3wyv6jj54bg34z0fzzk4xg0h6x98jqx4q2r7g1f0in0qgbb01"; depends=[]; }; + VFP = derive2 { name="VFP"; version="1.0"; sha256="1gkpqxmxyv1hdaxk5yi3cd1k9q246q5gj9xhfnc87dp60rfg8p8f"; depends=[gnm MASS]; }; + VFS = derive2 { name="VFS"; version="1.0.2"; sha256="1b8sl8id2gj4iqkpjzd3giybbix2jvskwsbw1kqj3zqr77hygxwg"; depends=[e1071 nleqslv]; }; + VGAM = derive2 { name="VGAM"; version="1.0-6"; sha256="1fg31xz86jblqraifiy3q36d0hjqnll01jxx85xq87j1cyhj060j"; depends=[]; }; VGAMdata = derive2 { name="VGAMdata"; version="1.0-3"; sha256="1jicadjaqmys1bbgkp64hmm8wwmi6f734il00v8qjz3jl9b02pkn"; depends=[]; }; VGAMextra = derive2 { name="VGAMextra"; version="0.0-1"; sha256="0rlj4q6ry6v3fnpmg4s33ynn7qzs5m98csap55nyn6r9ynrh5gk5"; depends=[VGAM]; }; VHDClassification = derive2 { name="VHDClassification"; version="0.3"; sha256="1ij4h3gzxb9mm9q743kc3sg2q609mnqz6mhlrbim1wcjji2b7bv4"; depends=[e1071 lattice]; }; + VICmodel = derive2 { name="VICmodel"; version="0.1.1"; sha256="1236llbmrsgb7aiwdmdv2iq203avcsl68dkk652gfm69dwyxv111"; depends=[foreach Rcpp]; }; VIF = derive2 { name="VIF"; version="1.0"; sha256="0yvg6ikrcs7mhg0pavhcywrfysv7ylvnhxpc5sam86dbp69flx9x"; depends=[]; }; VIFCP = derive2 { name="VIFCP"; version="1.2"; sha256="0w41k25vss806m5vpwmmcfsmwaixmln0pliql3a6xlwsihha5i34"; depends=[]; }; VIGoR = derive2 { name="VIGoR"; version="1.0"; sha256="1c24s917aafqy46b3xlsw8v3afs11nd5bq83vlygpgnz1612jpga"; depends=[]; }; VIM = derive2 { name="VIM"; version="4.7.0"; sha256="1vjcs5wvjv94ln01d94h9rs4j50d3ky4n26mm3prgh13raylrmnd"; depends=[car colorspace data_table e1071 laeken MASS nnet Rcpp robustbase sp vcd]; }; VIMGUI = derive2 { name="VIMGUI"; version="0.10.0"; sha256="14na9ss0vkcys979kdcciynwssqsvy2w566nydgzd3n7gcmx2agm"; depends=[Cairo foreign gWidgets gWidgetsRGtk2 Hmisc RGtk2 survey tkrplot VIM]; }; VLF = derive2 { name="VLF"; version="1.0"; sha256="1il8zhm80mc22zj16dpsy4s6s9arj21l9ik0vccyrpnlr8ws3d3l"; depends=[]; }; - VLMC = derive2 { name="VLMC"; version="1.4-1"; sha256="0y91cl9pv1d5s8956grdx3y4xa5l1fabrh1wl5hn11fjgyz1dcij"; depends=[MASS]; }; + VLMC = derive2 { name="VLMC"; version="1.4-2"; sha256="1jlyi0zl6d3zk8mp3rzcsq850ivqcg8296jndrdzmlsrp8mnldrq"; depends=[MASS]; }; VNM = derive2 { name="VNM"; version="7.1"; sha256="19qglcibb7r6jjz0n0piklwfv3hi4jphd6vmyfbm0ccjjkmn5nin"; depends=[Rcpp]; }; VRPM = derive2 { name="VRPM"; version="1.2"; sha256="1cai5a71vzkx0d7cwzsxbcz7r9cdkqjk4l4bp2ffj5pp7nrlh15r"; depends=[fields ggplot2 Hmisc kernlab R2HTML ROCR shiny survival viridis]; }; VSE = derive2 { name="VSE"; version="0.99"; sha256="07m5080nw72b77238v2wwdh4dxsvv6y78d4j1329n90wyj2crxl4"; depends=[car GenomicRanges igraph IRanges]; }; @@ -4008,12 +4173,13 @@ in with self; { VTrack = derive2 { name="VTrack"; version="1.21"; sha256="1acf2b8zy72shc4768rhikfa3590h3l3nwk32jk7pwsms0nb87rf"; depends=[checkmate doParallel foreach gdistance gstat Hmisc intervals lubridate plotKML plyr raster sp spacetime XML]; }; VWPre = derive2 { name="VWPre"; version="1.1.0"; sha256="1ccrim9nx5fmmadg687gz9qrfkyxp48rskg1n2pxfwd3h10c9js1"; depends=[dplyr ggplot2 mgcv rlang shiny tidyr]; }; VaRES = derive2 { name="VaRES"; version="1.0"; sha256="0gw05jiqgirhz3c8skbb07y4h44r6vi68gnd5y7ql455v0c2raza"; depends=[]; }; + VarBundle = derive2 { name="VarBundle"; version="0.3.0"; sha256="0jfx9gkb3f29lgc0nrz3xc7m2ham0scx9lay7x5a6ira7crga6cr"; depends=[crayon dplyr glue magrittr R6 stringr tibble]; }; VarED = derive2 { name="VarED"; version="1.0.0"; sha256="16j9p2a143y4hqclsv1mig0fccrzjx2r0lll0wz8isjp9x1wzjv8"; depends=[]; }; VarReg = derive2 { name="VarReg"; version="1.0.2"; sha256="04235hr0r6sp7r3ccvcfb8l6p8yapcdrn6zl7mmvbyc4qb70gawh"; depends=[sn survival]; }; - VarSelLCM = derive2 { name="VarSelLCM"; version="2.1.2"; sha256="0ilkn40b7845y3nlli160i6fmfaw2p1hvd97q2hnpvscrgmdqvz3"; depends=[ggplot2 mgcv Rcpp RcppArmadillo shiny]; }; + VarSelLCM = derive2 { name="VarSelLCM"; version="2.1.3"; sha256="07ss4wxw1q1mvf6y860zcl5ja65f5yaqpgqj1k1yi5smqj50y0jk"; depends=[ggplot2 mgcv Rcpp RcppArmadillo shiny]; }; VarSwapPrice = derive2 { name="VarSwapPrice"; version="1.0"; sha256="12q2wp2cqi9q47mzbb7sc250zkjqkhs9z0h93ik0h63dv339abgj"; depends=[]; }; - VarfromPDB = derive2 { name="VarfromPDB"; version="2.2.7"; sha256="1sb31338r2p0jsa3k72q9lc5f57cybywmda7q2j8byngh1fjvgyz"; depends=[curl RISmed stringi stringr XML XML2R]; }; - VariableScreening = derive2 { name="VariableScreening"; version="0.1.1"; sha256="03l929qhgr1bd721488xx0il1hlswv3zdad518ki94ghq9c4nmg3"; depends=[expm gee MASS]; }; + VarfromPDB = derive2 { name="VarfromPDB"; version="2.2.10"; sha256="09j8y6n0bwsj3n620nbni6b7f4pmb91q41770sfpc5v3l5i3jc7c"; depends=[curl RISmed stringi stringr XML XML2R]; }; + VariableScreening = derive2 { name="VariableScreening"; version="0.2.0"; sha256="04j75081g88g5hjydcnl3jcf99zzbrhlbjmmzcprvrlm5i5i3k93"; depends=[energy expm gee MASS]; }; VarianceGamma = derive2 { name="VarianceGamma"; version="0.3-1"; sha256="0h424hdphbgi9i84bgzdwmsq05w61q8300x8f9y4szbxa5k2dnar"; depends=[DistributionUtils GeneralizedHyperbolic RUnit]; }; VdgRsm = derive2 { name="VdgRsm"; version="1.5"; sha256="13mbv3ih6p2915wdzq4zjx7m4k37w1xddkxx6dzk1jiak2br9slj"; depends=[AlgDesign permute]; }; Vdgraph = derive2 { name="Vdgraph"; version="2.2-2"; sha256="1q8l711zbrrj4h1wmpv93nbvlg8xi6kjv22zpidkck8ncpyyla80"; depends=[]; }; @@ -4024,7 +4190,7 @@ in with self; { VertexSort = derive2 { name="VertexSort"; version="0.1-1"; sha256="0n9m5l85ylin6756rsksak94nv0626qd7czhhj6plz4nfrr27sgl"; depends=[igraph snowfall]; }; VeryLargeIntegers = derive2 { name="VeryLargeIntegers"; version="0.1.6"; sha256="1ccl4j3vb6aw1qfbqil67dy74daldajwzm7s5hqcidm73fd0wknc"; depends=[Rcpp]; }; VetResearchLMM = derive2 { name="VetResearchLMM"; version="1.0.0"; sha256="1a7wm04bsr5shak7l8ypxlhlnx3qkq1jdpjnji1n05p6b00ih9h1"; depends=[ggplot2 lme4 lmerTest multcomp nlme]; }; - VineCopula = derive2 { name="VineCopula"; version="2.1.6"; sha256="0gppfjffz5vc35rfjjplwjfp2vpw8hmfc0257k33qki46g5haw5j"; depends=[ADGofTest copula doParallel foreach kdecopula lattice MASS mvtnorm network]; }; + VineCopula = derive2 { name="VineCopula"; version="2.1.8"; sha256="1sdj6561ya7px4bp4kq23ggjf1bmis465zpnwn0i650z3q6y7al7"; depends=[ADGofTest copula doParallel foreach kdecopula lattice MASS mvtnorm network]; }; VisuClust = derive2 { name="VisuClust"; version="1.2"; sha256="0hnjmrz352950rzky88q4nwvkx7zp6x3lsm7kff5dl4w05iq4wsl"; depends=[aplpack]; }; VizOR = derive2 { name="VizOR"; version="0.8-5"; sha256="1v76m67xdlg06w3dmp27mh3mv3lfqy6bd1iq907dynp2g4qf4ww0"; depends=[lattice rms]; }; Voss = derive2 { name="Voss"; version="0.1-4"; sha256="056izh1j26vqjhjh01fr7nwiz1l6vwr5z4fll87w99nc5wc4a467"; depends=[fields]; }; @@ -4033,22 +4199,22 @@ in with self; { W3CMarkupValidator = derive2 { name="W3CMarkupValidator"; version="0.1-6"; sha256="0nfay5nqss3zlw4nikj8h3zzlnjfxjch4pm3qky15qrcigrybrbl"; depends=[curl xml2]; }; WACS = derive2 { name="WACS"; version="1.0"; sha256="1x6vn7xhrnaggrxkvap6si8gz7b6z2zpjpbb9zgag4vyq3s7nxgy"; depends=[mclust mnormt mvtnorm tmvtnorm]; }; WARN = derive2 { name="WARN"; version="1.2-3"; sha256="0vkp70cc3slz9y8qfybrqyjyglsxz9fnqrid735h2a113h4xvr3v"; depends=[MASS]; }; - WCE = derive2 { name="WCE"; version="1.0.1"; sha256="0zp9xcq40vy2pv06rqn4d24bracm2vd3yyq4h56qppx47419fmm4"; depends=[plyr survival]; }; + WCE = derive2 { name="WCE"; version="1.0.2"; sha256="105pwpd9ikm0gwz4r12jl6cgs1riwsk9pn5qk9cn3msgwa0sdynx"; depends=[plyr survival]; }; WCQ = derive2 { name="WCQ"; version="0.2"; sha256="1yhkr2iazd7lh9r68xz1lh32z6r1sdnmqrjshcrm4rbwai0j3lkr"; depends=[]; }; WDI = derive2 { name="WDI"; version="2.5"; sha256="0wm3b844pn33047wfd8yp22c6ysdsi8qx71fm1h5rq5vm9mcg9cp"; depends=[RJSONIO]; }; WEE = derive2 { name="WEE"; version="1.0"; sha256="0i3h67p72lr708mwdw3rbzr1lqqr8n2dxv7f0bwyqzxv41sx1iz3"; depends=[doParallel foreach quantreg]; }; - WGCNA = derive2 { name="WGCNA"; version="1.63"; sha256="1225dqm68bynkmklnsxdqdd3zqrpzbvqwyly8ibxmk75z33xz309"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore Rcpp robust survival]; }; + WGCNA = derive2 { name="WGCNA"; version="1.66"; sha256="0rhnyhzfn93yp24jz9v6dzrmyizwzdw070a7idm0k33w1cm8sjqv"; depends=[AnnotationDbi doParallel dynamicTreeCut fastcluster foreach GO_db Hmisc impute matrixStats preprocessCore Rcpp robust survival]; }; WHO = derive2 { name="WHO"; version="0.2"; sha256="0rpk7ddpkjcqs0m7cgxs55k178js0d70ccfximp2vqrsw0igkmk9"; depends=[dplyr httr]; }; WLreg = derive2 { name="WLreg"; version="1.0.0"; sha256="0paghjcshhrr6y1gm98d6gr78zvgzhl678g9f96hppfa4q3lfpr7"; depends=[inline survival]; }; WMCapacity = derive2 { name="WMCapacity"; version="0.9.6.7"; sha256="167wx759xi7rv74n6sdsdkjnfpxdsiybk4ik70psdgfwdqqcga1y"; depends=[cairoDevice coda gtools gWidgets gWidgetsRGtk2 RGtk2 XML]; }; WMDB = derive2 { name="WMDB"; version="1.0"; sha256="10wdjy3g2qg975yf1dhy09w9b8rs3w6iszhbzqx9igfqvi8isrr1"; depends=[]; }; - WMWssp = derive2 { name="WMWssp"; version="0.3.2"; sha256="019fcmf5zmbm20zyvx96nwp66lqm2xw7hbpacfwn8cvw3dq85chr"; depends=[rankFD]; }; + WMWssp = derive2 { name="WMWssp"; version="0.3.4"; sha256="00kjddiy9sjfhnixj9p8v8sd389c1cm5j4rz4gar84mgmbc520gg"; depends=[rankFD]; }; WPC = derive2 { name="WPC"; version="1.0"; sha256="0li502hwa4n945yfnilslyvl12ls66kazbfmxb4kkjbaf500mjp9"; depends=[msm survival]; }; WPKDE = derive2 { name="WPKDE"; version="0.1"; sha256="100vla11fbw16x5n4w4kbslz4n725v4x6j0hrxzrk99ryl0crmf6"; depends=[]; }; WRS2 = derive2 { name="WRS2"; version="0.10-0"; sha256="17iriwkng75iy93mp99ihzmvgpgbrg0sgwxs2yx1d3ss7h0k1x3j"; depends=[MASS mc2d plyr reshape]; }; WRSS = derive2 { name="WRSS"; version="1.4"; sha256="1fkbrk9s3jn7qfv5jvzcgjf0jwbxi8dr7485msxj3najbhqd2qy5"; depends=[GGally ggplot2 Hmisc network]; }; - WRTDStidal = derive2 { name="WRTDStidal"; version="1.1.0"; sha256="0yyhls0qzwwj4sz5d1nvzfiacx28dmf2hgjc7xgfi2qjkckg40hs"; depends=[caret dplyr EnvStats fields foreach forecast ggplot2 gridExtra lubridate purrr quantreg RColorBrewer survival tidyr]; }; - WVPlots = derive2 { name="WVPlots"; version="1.0.0"; sha256="16wazxf4c1awxfix4dmp1zcwrfwbkddck71gxgimf471gx60hl8p"; depends=[cdata ggplot2 gridExtra mgcv sigr wrapr]; }; + WRTDStidal = derive2 { name="WRTDStidal"; version="1.1.1"; sha256="0q2rdzbz3cbgr19sh9j3fqdn0lvwrq93qq2rjmnhx6ia9avkywa8"; depends=[caret dplyr fields foreach forecast ggplot2 gridExtra lubridate purrr quantreg RColorBrewer survival tidyr]; }; + WVPlots = derive2 { name="WVPlots"; version="1.0.5"; sha256="0fp298n1dmsy5hs90aki7aprvybpikp3v8niwlnz7k3f2k2g9dl7"; depends=[cdata ggplot2 gridExtra mgcv sigr wrapr]; }; WWGbook = derive2 { name="WWGbook"; version="1.0.1"; sha256="0q8lnd1fp4rmz715x0lf61py3xw8wg55yq3gvswaqwy68dlqrzjc"; depends=[]; }; WWR = derive2 { name="WWR"; version="1.2.2"; sha256="0ia1dd12r1l08s9nhgvk55jmqwv58jawm25gd2ni6wpa3mcmq02g"; depends=[inline]; }; WaterML = derive2 { name="WaterML"; version="1.7.1"; sha256="0aqcanq2l3m9w1kglmkbqshs80wx9inmjp0c1i2j901g4k35ss5j"; depends=[httr RJSONIO XML]; }; @@ -4058,14 +4224,15 @@ in with self; { WaveletArima = derive2 { name="WaveletArima"; version="0.1.1"; sha256="19hz2q280m41qh3m9lx3i9p6p5fl6pw8r9b06xk6sn04hxbim8xx"; depends=[forecast fracdiff wavelets]; }; WaveletComp = derive2 { name="WaveletComp"; version="1.1"; sha256="07w2aa0jiflvxyqhgh48705hg8hjspd103jd00i2pcw2v42hwmf8"; depends=[]; }; WaverR = derive2 { name="WaverR"; version="1.0"; sha256="084fhzggzm075w6wp2lqd3j0an21idhw8z5l8ynz4y96mpmn204a"; depends=[kimisc MASS]; }; - WeMix = derive2 { name="WeMix"; version="1.0.2"; sha256="1wj1jxw65i94xf5zk9phgkwybvl2h05ynq0zhdc7q3j6b90mv9hn"; depends=[lme4 MASS minqa NPflow numDeriv Rcpp RcppArmadillo Rmpfr statmod]; }; + WeMix = derive2 { name="WeMix"; version="2.1.0"; sha256="0bnj4iziclmvqxzb51sjvs0mlk9glkg5yvcvh349m8cvv2634dsb"; depends=[lme4 NPflow numDeriv Rcpp RcppArmadillo Rmpfr statmod]; }; WebGestaltR = derive2 { name="WebGestaltR"; version="0.1.1"; sha256="0cdpfwp4whx8pff73acxga072lwbibl44hxdjs9jsb5i21h55vbr"; depends=[data_table doParallel foreach pkgmaker PythonInR rjson]; }; WebPower = derive2 { name="WebPower"; version="0.5"; sha256="184wig66bcg7vsppaijq5jpq2hffl3bhshdx4ilz5hw98mimxg13"; depends=[lavaan lme4 MASS PearsonDS]; }; - WeibullR = derive2 { name="WeibullR"; version="1.0.9"; sha256="13qkfnfp2pbvb78mj7fg8cgjnbrxv6dbms70wvn9f3mc70djmrb3"; depends=[Rcpp RcppArmadillo]; }; + WeibullR = derive2 { name="WeibullR"; version="1.0.10"; sha256="1h2w1rgap9yjns7cby0559jwzzwhzjq1h6lwsawrfnni7c36iliq"; depends=[Rcpp RcppArmadillo]; }; WeightIt = derive2 { name="WeightIt"; version="0.4.0"; sha256="1y0910wa1lx2jrbnzk9099v64skh7sm8cx85g62ikgcj291z6c8c"; depends=[cobalt]; }; Weighted_Desc_Stat = derive2 { name="Weighted.Desc.Stat"; version="1.0"; sha256="030i12mnwlj976avvk3grrccgprsckmc35dm2ajwdfc9dijhypnj"; depends=[]; }; WeightedCluster = derive2 { name="WeightedCluster"; version="1.2-1"; sha256="04gsr65mssv4cz4v8sh44qhyzn0isll057d45z4ljv6sx0an5yhl"; depends=[cluster RColorBrewer TraMineR]; }; WeightedPortTest = derive2 { name="WeightedPortTest"; version="1.0"; sha256="007v3w9ssiv2sds7sikpal27g6pxwxhs7bvcyw6kr0vg8gvlbi8h"; depends=[]; }; + WeightedROC = derive2 { name="WeightedROC"; version="2018.10.1"; sha256="1hdksd47pkky83g6hn6123f243yw3bzrlaibdgr2kd5kxn9rma3y"; depends=[]; }; WhatIf = derive2 { name="WhatIf"; version="1.5-9"; sha256="0ihpp3wbhpsg00g0s31l0ca4q0a2sch2a2j8cgz14g8na43x8831"; depends=[lpSolve pbmcapply Zelig]; }; WhiteStripe = derive2 { name="WhiteStripe"; version="2.3.1"; sha256="1qyv06ai83b1idfg4bgr97askyzlwi2dv8d5wkivb5czp7crdri1"; depends=[mgcv oro_nifti]; }; WhopGenome = derive2 { name="WhopGenome"; version="0.9.7"; sha256="1xa7d9x5ny8g79scfkv7v5ix9m3mfzg0fks2bsan9zqyhcd01fsq"; depends=[]; }; @@ -4078,18 +4245,18 @@ in with self; { WilcoxCV = derive2 { name="WilcoxCV"; version="1.0-2"; sha256="1kbb7ikgnlxybmvqrbn4cd8xnqrkwipk4xd6yja1xsi39a109xzl"; depends=[]; }; WindCurves = derive2 { name="WindCurves"; version="0.1.3"; sha256="0bvbnrkdk0g0radgcw4zbhq6czpvq3f7f34x83qk09i8ngmwd28c"; depends=[drc imputeTestbench readbitmap]; }; WordPools = derive2 { name="WordPools"; version="1.0-2"; sha256="1izs4cymf2xy1lax85rvsgsgi05ygf0ibi9gzxc96sbgvy4m78kf"; depends=[]; }; - WordR = derive2 { name="WordR"; version="0.3.0"; sha256="0wfgr5jg0vn58cn2dra3s46c5x5msqw3p666lbhhs48m75j12daq"; depends=[dplyr flextable officer]; }; + WordR = derive2 { name="WordR"; version="0.3.1"; sha256="17g8v3xhdy57y0b95zrakhi0zamqi35v0zcmjpy47xyqyk4b2grs"; depends=[dplyr flextable officer]; }; Wrapped = derive2 { name="Wrapped"; version="2.0"; sha256="1z5kypsd39z9arsw57axckvl8b4jnr5wv60s9z58f5s89gn5vxxg"; depends=[AdequacyModel ald cubfits evd fBasics gamlss_dist GeneralizedHyperbolic GEVStableGarch glogis irtProb LCA lqmm metRology NormalLaplace normalp ordinal sgt SkewHyperbolic sld sn VarianceGamma VGAM]; }; WrightMap = derive2 { name="WrightMap"; version="1.2.1"; sha256="16zp7h28fap5hq5xzvkb4lc217yhfmwzfbvw2lsni0gf9qxqkgqd"; depends=[]; }; WriteXLS = derive2 { name="WriteXLS"; version="4.0.0"; sha256="0nwxi36w3rkzw9j0qil64gakhb101rxg1wydjkwlpg0nbsj1sm50"; depends=[]; }; WufooR = derive2 { name="WufooR"; version="0.8"; sha256="0nwf66y1jb7dw4yhkdl9g4brh59ky4q4x6j9zbqdn70pcj9hq9jx"; depends=[dplyr httr jsonlite]; }; XBRL = derive2 { name="XBRL"; version="0.99.18"; sha256="1bwvxqbxdf1ynz2bv27l86h05h8y19q2li2y79xk819p5nkxq341"; depends=[Rcpp]; }; - XGR = derive2 { name="XGR"; version="1.1.3"; sha256="01czagfjx5w212l5h29klrrsg0qiprlsiwpz7pfqh44haifnq4pz"; depends=[BiocGenerics dnet dplyr GenomicRanges ggnetwork ggplot2 ggrepel igraph IRanges Matrix plot3D RCircos rtracklayer S4Vectors supraHex tidyr XML]; }; + XGR = derive2 { name="XGR"; version="1.1.4"; sha256="0npyfq587wg2qz2n0f8gmnq396h3xil20navbgfy7dbkvfncv3f0"; depends=[BiocGenerics dnet dplyr GenomicRanges ggnetwork ggplot2 ggrepel igraph IRanges Matrix plot3D RCircos rtracklayer S4Vectors supraHex tidyr XML]; }; XHWE = derive2 { name="XHWE"; version="1.0"; sha256="1ca8y9q3623d0vn91g62nrqf3pkbcbkpclmddw5byd37sdrgsi5l"; depends=[]; }; XKCDdata = derive2 { name="XKCDdata"; version="0.1.0"; sha256="1lx9frlbc549qrh4d3m79r3l9icfzqkgfgp8raa8x46a2havi0a5"; depends=[assertthat dplyr glue htmltools httr jsonlite magrittr tibble]; }; XLConnect = derive2 { name="XLConnect"; version="0.2-15"; sha256="1cvq677m09gwpwhj3fy15mbfn0s0b1y35w95pjnijiwpcpdxiq96"; depends=[rJava XLConnectJars]; }; XLConnectJars = derive2 { name="XLConnectJars"; version="0.2-15"; sha256="1ipqyjgsh5a1ygsbhyqxyj9wfjv1f73cyfrpx6jvf0is5jklhvxx"; depends=[rJava]; }; - XML = derive2 { name="XML"; version="3.98-1.11"; sha256="18izvlg2x9mzr6yb3yf02ghwbyn00frki3av4lpc44r22m4djnsh"; depends=[]; }; + XML = derive2 { name="XML"; version="3.98-1.16"; sha256="0nl1kk354r8snhj6p9mc74m7awvqc6akmd4y3a46y78yv3g15njp"; depends=[]; }; XML2R = derive2 { name="XML2R"; version="0.0.6"; sha256="0azfh950r2b7ck3n1vzk3mdll7zy844nx3mbk676jxnj8gg7nxk5"; depends=[plyr RCurl XML]; }; XMRF = derive2 { name="XMRF"; version="1.0"; sha256="0jnyy9pcksfadznidqsbwh8nlqv3k0yppj76q8a2g0aidbdmg2cc"; depends=[glmnet igraph MASS Matrix snowfall]; }; XNomial = derive2 { name="XNomial"; version="1.0.4"; sha256="1mwx302576rmsjllbq2clfxilm3hkyp5bw0wmwqbn0kgv5wpy8z6"; depends=[]; }; @@ -4107,7 +4274,7 @@ in with self; { YuGene = derive2 { name="YuGene"; version="1.1.6"; sha256="1kv9n82wrms0c4y5fz9ckzhm1a609mnqp0pwvd0fpyscp8krmlpp"; depends=[mixOmics]; }; ZIBBSeqDiscovery = derive2 { name="ZIBBSeqDiscovery"; version="1.0"; sha256="12g9rga9z6318ni6x6q9hdqlgl93y2xn8vf3gc6sm97fz8pliswx"; depends=[mcc]; }; ZIBseq = derive2 { name="ZIBseq"; version="1.2"; sha256="13rjy4jl9wil6hhpra4qmdis0iyqxchzsf9l7q6r0dz1f7dpd2nq"; depends=[gamlss gamlss_dist nlme]; }; - ZIM = derive2 { name="ZIM"; version="1.0.3"; sha256="1497ki0pr0x21fz5wa2z6zgb2br99z56gvfxyn9cglqq45if6cjh"; depends=[MASS]; }; + ZIM = derive2 { name="ZIM"; version="1.1.0"; sha256="0scyfjn4ilsvha3x41c3b8bcfi31hlhwm77wn2a8hj5dsvnnmzig"; depends=[MASS]; }; ZOIP = derive2 { name="ZOIP"; version="0.1"; sha256="0fraxzr2mfd7w705j2fryhh9vpg6nkag6kmk7p7in3zknxwipfh3"; depends=[boot GHQp numDeriv rmutil]; }; ZRA = derive2 { name="ZRA"; version="0.2"; sha256="1sx1q5yf68hhlb5j1hicpj594rmgajqr25llg7ax416j0m2rnagi"; depends=[dygraphs forecast]; }; ZeBook = derive2 { name="ZeBook"; version="1.0"; sha256="06dg3jk37y64mdcb8hpxgj8rclgxqm96dalm7y5zjb7nrj9jfydk"; depends=[deSolve triangle]; }; @@ -4115,6 +4282,7 @@ in with self; { ZeligChoice = derive2 { name="ZeligChoice"; version="0.9-6"; sha256="1whfwc42lsi54xfr423h6jwbvpj6yjyyf0854k1f1ms13liahm8w"; depends=[dplyr Formula jsonlite MASS VGAM Zelig]; }; ZeligEI = derive2 { name="ZeligEI"; version="0.1-2"; sha256="0kilzfqmm6a41mmjvlynh3rnj30fqiq8gsja28fzwpf0lbl89slg"; depends=[dplyr ei eiPack Formula jsonlite MASS MCMCpack Zelig]; }; ZillowR = derive2 { name="ZillowR"; version="0.1.0"; sha256="1wrr58p76ps29fqzzwgfvfibxrvc72p2yzs5kc2rv1yxzzcpyxvb"; depends=[RCurl XML]; }; + ZipRadius = derive2 { name="ZipRadius"; version="1.0.1"; sha256="00q4a2bsajs5ns4vdm289iaj9mczxjn3ssyrnmg2z4wicr2ljizv"; depends=[dplyr geosphere ggplot2 magrittr rlang testthat]; }; Zseq = derive2 { name="Zseq"; version="0.2.0"; sha256="06dndi2b1q79bmxax11bv0l5ifcz1mhpvbn90y6a6xymrgcq0ivi"; depends=[gmp]; }; aCRM = derive2 { name="aCRM"; version="0.1.1"; sha256="0kzp568hd9c9a9qgniia5s5gv0q5f89xfvvwpzb197gqhs3x092v"; depends=[ada dummies kernelFactory randomForest]; }; aLFQ = derive2 { name="aLFQ"; version="1.3.4"; sha256="1q2l5cwkcsng22nxckgc7aalvy3qhvgga5nkchfpy53sxg68awqv"; depends=[bio3d caret data_table lattice plyr protiq randomForest reshape2 ROCR seqinr]; }; @@ -4130,23 +4298,23 @@ in with self; { abc_data = derive2 { name="abc.data"; version="1.0"; sha256="1bv1n68ah714ws58cf285n2s2v5vn7382lfjca4jxph57lyg8hmj"; depends=[]; }; abcdeFBA = derive2 { name="abcdeFBA"; version="0.4"; sha256="1rxjripy8v6bxi25vdfjnbk24zkmf752qbl73cin6nvnqflwxkx4"; depends=[corrplot lattice rgl Rglpk]; }; abcrf = derive2 { name="abcrf"; version="1.7.1"; sha256="06vy3inikrr9hv36q4djhrgzi9zizdfnhz17wpra8kadmr7qj441"; depends=[MASS matrixStats ranger Rcpp RcppArmadillo readr stringr]; }; - abctools = derive2 { name="abctools"; version="1.1.1"; sha256="0x6pjdvn5z510j42byddzdvg2mgv81yy72snia5k8h7bs9k5glfg"; depends=[abc abind Hmisc plyr]; }; + abctools = derive2 { name="abctools"; version="1.1.3"; sha256="07s9dg10i8lsxl73b4n2hynca2fjgb0ykb0dz8c3zv6cgw3cyx97"; depends=[abc abind Hmisc plyr]; }; abd = derive2 { name="abd"; version="0.2-8"; sha256="191gspqzdv573vaw624ri0f5cm6v4j524bjs74d4a1hn3kn6r9b7"; depends=[lattice mosaic nlme]; }; abe = derive2 { name="abe"; version="3.0.1"; sha256="1f19h3xzzmjhvwc1rrb8z0rai3ip03y4gdi2gg9bfr5sg2nfklk6"; depends=[]; }; abf2 = derive2 { name="abf2"; version="0.7-1"; sha256="0d65mc1w4pbiv7xaqzdlw1bfsxf25587rv597hh41vs0j0zlfpxx"; depends=[]; }; abind = derive2 { name="abind"; version="1.4-5"; sha256="0b1zd8jbnl6l292cr9rb50m09fy3ylxvzkpgi5lfb1nbzddcwfis"; depends=[]; }; abjutils = derive2 { name="abjutils"; version="0.2.1"; sha256="0qrsc4if7aif73qp95lw6b5986c2r0jn7m39123zij8k15vc935b"; depends=[devtools dplyr glue httr magrittr plyr progress purrr rstudioapi scales stringi stringr tibble tidyr]; }; - abn = derive2 { name="abn"; version="1.0.2"; sha256="0jxpw5mplnpc57jjg9w3zrik40g7va6s8m9zbfsyf0vqn645wfwq"; depends=[Cairo]; }; + abn = derive2 { name="abn"; version="1.2"; sha256="00k0razgdb5y5f62622fm7rxkcxrxg470nyyb02dvpfp60254kvs"; depends=[Cairo lme4 MASS nnet Rcpp RcppArmadillo rjags]; }; abnormality = derive2 { name="abnormality"; version="0.1.0"; sha256="1fzfskl9akl06nliy8hkv2a0pznpj8pwcypg3gj5r2nzvr3kan9v"; depends=[MASS Matrix]; }; abodOutlier = derive2 { name="abodOutlier"; version="0.1"; sha256="1pvhgxmh23br84r0fbmv7g53z2427birdja96a67vqgz18r3fdvj"; depends=[cluster]; }; abundant = derive2 { name="abundant"; version="1.1"; sha256="1m76qdmqvwpgm0sihazi2dna7cgsz9rljal18vgffb5wamwmg9k7"; depends=[QUIC]; }; acc = derive2 { name="acc"; version="1.3.3"; sha256="1ii2vm47djxbixa75h690q1s2f9m9x6i8nkygik93j6dayr6kr1m"; depends=[circlize DBI ggplot2 iterators mhsmm nleqslv PhysicalActivity plyr R_utils Rcpp RcppArmadillo RSQLite zoo]; }; accSDA = derive2 { name="accSDA"; version="1.0.0"; sha256="0sgxy5y8kkc1n35657kifwfjsba7y5m1vbr7rkk5lmbpkzahqm61"; depends=[ggplot2 ggthemes gridExtra MASS rARPACK sparseLDA]; }; - accelerometry = derive2 { name="accelerometry"; version="2.2.5"; sha256="00mn09j7y39sc7h5srnnfk2l73vhh6zq7rzc0vckfvs72lncmwv5"; depends=[Rcpp]; }; + accelerometry = derive2 { name="accelerometry"; version="3.1.2"; sha256="13xzrwhr4i1nj9c8vrmfdg2rmrc8n446iihcyxmy99sm99hpzyip"; depends=[dvmisc Rcpp]; }; accelmissing = derive2 { name="accelmissing"; version="1.4"; sha256="1nql9inx6azdzi3z4sfm2vdml2mms6krl8wzlf1dn1c97ahn57fy"; depends=[mice pscl]; }; accrual = derive2 { name="accrual"; version="1.3"; sha256="11clm9s5c5518nmp6hd6pjnp0s28y92b2i2x0xgj4j5g816p4j3z"; depends=[fgui SMPracticals tcltk2]; }; accrued = derive2 { name="accrued"; version="1.4.1"; sha256="05g1jb5914z18rcai1ahn7nihn27vr2rnadwv94gc1j7ivvikvs5"; depends=[]; }; - acebayes = derive2 { name="acebayes"; version="1.5"; sha256="0533f9c44lq57cyar05z3ikg091h1pyrq84h2zghjyp66drnw6pa"; depends=[compare lhs randtoolbox Rcpp RcppArmadillo]; }; + acebayes = derive2 { name="acebayes"; version="1.5.1"; sha256="1rhc8vib7y1nf4m5i21bsvfqmccfqv2ghlfa8vhx8dik6m733zn9"; depends=[compare lhs randtoolbox Rcpp RcppArmadillo]; }; acepack = derive2 { name="acepack"; version="1.4.1"; sha256="1f98rpfjmhd92rdc3j004plyfpjailz6j0ycysbac0kgj83haxc2"; depends=[]; }; acid = derive2 { name="acid"; version="1.1"; sha256="030i0y8s283ivbsmjccpbv9v7mgbcg2jk9df7vgcbbns74swf9hd"; depends=[gamlss gamlss_dist Hmisc]; }; acm4r = derive2 { name="acm4r"; version="1.0"; sha256="1wqzc35i1rshx0zlmas8y4qkkvy6h9r4i4apscjjv1xg2wjflzxa"; depends=[MASS]; }; @@ -4167,39 +4335,41 @@ in with self; { adagio = derive2 { name="adagio"; version="0.7.1"; sha256="1h9l0ddrxq8y35iy9hdkxdvdwsqpnpkzzbkbwwhm4380lq1m7a3k"; depends=[]; }; adapr = derive2 { name="adapr"; version="2.0.0"; sha256="1s57jdbi5pik56xjz1d4438ax6cywg2yq2s47h5g6wrwvpgr1qfw"; depends=[archivist devtools digest doParallel gdata ggplot2 git2r igraph knitr plotly plyr rmarkdown shiny shinydashboard versions]; }; adaptMCMC = derive2 { name="adaptMCMC"; version="1.3"; sha256="08v11rl0p4w94knb0yzs1ysj42xillya62yaw3zm40d4pqv7vcky"; depends=[coda Matrix]; }; + adaptMT = derive2 { name="adaptMT"; version="1.0.0"; sha256="1yllz1zd4cryf5bj8b2lcrj6zl79yjkllyh9p02ikryy5qmg419b"; depends=[]; }; adaptTest = derive2 { name="adaptTest"; version="1.0"; sha256="08d7a5dlzhaj236jvaw3c91008l66vf5i4k5anhcs32a3j8yh2iv"; depends=[lattice]; }; adaptalint = derive2 { name="adaptalint"; version="0.2.3"; sha256="0n047zibp3jsw8d3c971xnqgl8nsqxzcayic0xkz917pwlfrdnd7"; depends=[dplyr lintr purrr]; }; adaptiveGPCA = derive2 { name="adaptiveGPCA"; version="0.1.2"; sha256="0bb6hw77dfa66b12xyazlp992gwjb1plylixlmq4cv4yjhnl9n5z"; depends=[ape ggplot2 phyloseq shiny]; }; adaptivetau = derive2 { name="adaptivetau"; version="2.2-1"; sha256="1hd2l1jv4i5mg0k0g8bbrvv43nk1zxbwh21594zayrzjyikb2593"; depends=[]; }; adaptsmoFMRI = derive2 { name="adaptsmoFMRI"; version="1.1"; sha256="1h79gh1bd6s2xhwf4whh72wf2cz4di2p8dnlf6192mfg108qc6nw"; depends=[coda Matrix MCMCpack mvtnorm spatstat]; }; - addhaz = derive2 { name="addhaz"; version="0.4"; sha256="0i3czmv538m8s3pnxrhh2a1mrdv9m3hgzjkb25p7hygwnzz54drg"; depends=[boot MASS Matrix]; }; + addhaz = derive2 { name="addhaz"; version="0.5"; sha256="1709jq9rp5lhqk0qpk8zkdwzhcv1bcach8mm7yiz7hzcc1mgxb12"; depends=[boot MASS Matrix]; }; addhazard = derive2 { name="addhazard"; version="1.1.0"; sha256="0hk7br52wjmq605xgslv8lspr35aqpdgkiz2yljz31khy3y3vi8c"; depends=[ahaz rootSolve survival]; }; addinslist = derive2 { name="addinslist"; version="0.2"; sha256="04jqhdy0axs1a9c0cfi3pqy9hd67jqxz79a2lj209gd27qv1q22c"; depends=[curl devtools DT miniUI rappdirs rmarkdown rvest shiny shinyjs xml2]; }; additiveDEA = derive2 { name="additiveDEA"; version="1.1"; sha256="15nxpdybsda6yhjk23bpafr8v1zdx8332pcxf26k795q3ypjpiy2"; depends=[Benchmarking lpSolveAPI]; }; additivityTests = derive2 { name="additivityTests"; version="1.1-4"; sha256="048ds90wqjdjy1nyhna3m06asdklbh8sx1n556kss2j1r1pma1sw"; depends=[]; }; addreg = derive2 { name="addreg"; version="3.0"; sha256="13bwmgxylwi02g60j1rr51cr5jvvkl2nvf2lnnhnq46fhvs2ma7s"; depends=[combinat glm2 turboEM]; }; - ade4 = derive2 { name="ade4"; version="1.7-11"; sha256="0wm54wcpn87rdh6vyw04cr8vgba899y6jsl61f22bmlvx6d7kkac"; depends=[MASS]; }; + ade4 = derive2 { name="ade4"; version="1.7-13"; sha256="16z9jk4qj35ghsk4lwmq241dgc770y8a70dlmp9q4gz6d8ssgl7m"; depends=[MASS]; }; ade4TkGUI = derive2 { name="ade4TkGUI"; version="0.2-9"; sha256="0kfnikkzhyfxskrphr65b8amjhdfq35x6dda4kivdhn7ak07s3ll"; depends=[ade4 adegraphics lattice tkrplot]; }; adeba = derive2 { name="adeba"; version="1.1.2"; sha256="1z1law3qh6l902g62y8yapk4nypdmb20jmpwhxp9jbglalw9lm73"; depends=[mixtools pdist Rcpp]; }; adegenet = derive2 { name="adegenet"; version="2.1.1"; sha256="0ynfblp0hbd3dp3k86fn1wyhqr28lk6hs2bg4q7gyf0sfdfzwhrh"; depends=[ade4 ape boot dplyr ggplot2 igraph MASS reshape2 seqinr shiny spdep vegan]; }; - adegraphics = derive2 { name="adegraphics"; version="1.0-10"; sha256="0vig5c8hmsa6xapqzb8l4sm05qw7zc5s6b796bspffxj0crg3l3v"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; }; + adegraphics = derive2 { name="adegraphics"; version="1.0-12"; sha256="0rq1v9fp6nh181y8v8nxch2f8507hz5z2kaxy95ybp4bhp0jj37r"; depends=[ade4 KernSmooth lattice latticeExtra RColorBrewer sp]; }; adehabitatHR = derive2 { name="adehabitatHR"; version="0.4.15"; sha256="1bwx2mfkzfknr6fjjkbx2xnm4gksd78i8fz0bcizqyi1zhg5hd0c"; depends=[ade4 adehabitatLT adehabitatMA deldir sp]; }; adehabitatHS = derive2 { name="adehabitatHS"; version="0.3.13"; sha256="158a6qzks0hml6hk4f1vr66gvwdn09792i2ca3k23061i3j3xp75"; depends=[ade4 adehabitatHR adehabitatMA sp]; }; adehabitatLT = derive2 { name="adehabitatLT"; version="0.3.23"; sha256="0hf6wpwhsvfp906xk5sadfnvz524zmm05d0h2zxpx6089c6hnw3j"; depends=[ade4 adehabitatMA CircStats sp]; }; adehabitatMA = derive2 { name="adehabitatMA"; version="0.3.12"; sha256="13mhj36nfs36988g53yrmhyd8yq2zzxl8ppzql63964n04fybbpb"; depends=[filehash sp]; }; adephylo = derive2 { name="adephylo"; version="1.1-11"; sha256="06pnrycc7562h17gxbli935289a48na3p4vpb2w96i5cbrjg4jqm"; depends=[ade4 adegenet ape phylobase]; }; adepro = derive2 { name="adepro"; version="2.0.0"; sha256="0q9h7wmkgdnbhg2ygw32jl0bm2vrl32ig2nci9pphgwpsfzb34jq"; depends=[audio Cairo MASS shape shiny shinyBS]; }; - adespatial = derive2 { name="adespatial"; version="0.2-0"; sha256="1yqpfkz7i8jkqkbpafm09s1g6mjigpca73b4959zw7gqp9aariz6"; depends=[ade4 adegraphics adephylo lattice MASS shiny sp spdep vegan]; }; + adespatial = derive2 { name="adespatial"; version="0.3-2"; sha256="1368r72d7yjv6w4nl621bjphzqngvnjj5v9ibzsvs801qg71dx7l"; depends=[ade4 adegraphics adephylo lattice MASS shiny sp spdep vegan]; }; adfExplorer = derive2 { name="adfExplorer"; version="0.1.4"; sha256="11z6jm20giqmmz4dwcpa9fshvrmlmv8m0y1vg053nch05884niz2"; depends=[]; }; adhoc = derive2 { name="adhoc"; version="1.1"; sha256="0a59fv9glcqh4zzd0887ndrhlcaylja6vay2ifajp8an29gjk1vv"; depends=[ape pegas polynom]; }; adimpro = derive2 { name="adimpro"; version="0.8.2"; sha256="0nfzk9pp4p16c1nvpidngag96r845376h8ljh7m6p6rhk9fs4jdw"; depends=[awsMethods]; }; - adiv = derive2 { name="adiv"; version="1.1"; sha256="12m8p1agahzck1nm8j765wacc6vrl0pa31wld4rqxl7c2pvhs7f4"; depends=[ade4 adegraphics adephylo ape cluster phylobase]; }; - adjclust = derive2 { name="adjclust"; version="0.5.6"; sha256="0hff2fjp6dyrsc6crcipq72x7bs3jblv42z7v2c63clrrs7byc0h"; depends=[Matrix matrixStats]; }; + adiv = derive2 { name="adiv"; version="1.2"; sha256="1lmq499ipv2a4f3270hdp54x8n7gij4ssgagxc9i35qwqwdbr8gy"; depends=[ade4 adegraphics adephylo ape cluster phylobase rgl]; }; + adjclust = derive2 { name="adjclust"; version="0.5.7"; sha256="059gzbnwkmy1l8yqbl8ksz80nm6pf917sxplp048jzx57sxpry2k"; depends=[capushe Matrix matrixStats]; }; adjustedcranlogs = derive2 { name="adjustedcranlogs"; version="0.1.0"; sha256="08apfvpqvnnalx230p4qf5ckrwm1sgzras4zfrysgym5d4map9ci"; depends=[cranlogs dplyr lubridate rvest xml2]; }; adklakedata = derive2 { name="adklakedata"; version="0.6.1"; sha256="1lzj3ib4bgfkq5lq12n47pwc52h7k35xbbwj6brwsgx1gd4fx3x6"; depends=[httr rappdirs]; }; - adlift = derive2 { name="adlift"; version="1.3-3"; sha256="0q4ipk9yax4wqp3jckpx6ihriqaaaz0knxd19cm20qzdx37vz4id"; depends=[EbayesThresh]; }; + adlift = derive2 { name="adlift"; version="1.4-1"; sha256="14q7fnhlqvxdhnfjhdhfmadz241srplbm069a7ybbsql21cphpf3"; depends=[EbayesThresh]; }; admixturegraph = derive2 { name="admixturegraph"; version="1.0.2"; sha256="0ld4qyyvbnr5lz9ff64wjwif4c9xnqyjmbfgbl9bk6pia98zppl3"; depends=[doParallel dplyr foreach ggplot2 MASS neldermead pracma]; }; adnuts = derive2 { name="adnuts"; version="1.0.0"; sha256="0jy9wq269r7s70bwld6ngxc6vmaj9vplq4wn97x4f3c6lqy42swc"; depends=[ellipse rstan]; }; + adpss = derive2 { name="adpss"; version="0.1.1"; sha256="0p2gyfc4rxmms8zdsq4hjsh1njfl2s736arq8aq1am2wh1w9k5ch"; depends=[Rcpp]; }; ads = derive2 { name="ads"; version="1.5-3"; sha256="1k1japzcf0mafxkv9dlzaqz9n4c749lsx0lja4wj327ninpdcfy4"; depends=[ade4 spatstat]; }; advclust = derive2 { name="advclust"; version="0.4"; sha256="1g8a8q4zh6d4152jb66fh7wj7k6ks5k4kfcazzw70jdn10yi6b38"; depends=[clue ggplot2 knitr MASS reshape2]; }; adwave = derive2 { name="adwave"; version="1.3"; sha256="11iy50ng0zxvwsvdsvx262j8zgqaai308lp5is47az7xzvk57mx7"; depends=[waveslim]; }; @@ -4207,35 +4377,37 @@ in with self; { aemo = derive2 { name="aemo"; version="0.2.0"; sha256="11msifszq7pzmcmwibf2dk2j5dqjc74hrxdxshlprkp6p8sfhijh"; depends=[assertthat dplyr lubridate stringr]; }; afCEC = derive2 { name="afCEC"; version="1.0.2"; sha256="0jdppp93z5nb8m5qbry6cvd472mwiq1yrmm11906c3z2bfz7791f"; depends=[Rcpp RcppArmadillo rgl]; }; afc = derive2 { name="afc"; version="1.4.0"; sha256="1iy1wa88kf6zi6x7lbd0jdir653cvzvdraliqpxbac413wwb5gwl"; depends=[]; }; - afex = derive2 { name="afex"; version="0.21-2"; sha256="0wf6fvfwk1v2bswp1j8ab2r157vr1i9r1wr1fqhrcaxa2c4fikmz"; depends=[car emmeans lme4 lmerTest pbkrtest reshape2]; }; + afex = derive2 { name="afex"; version="0.22-1"; sha256="065wbxljl77zqvc2c4gpfpfyc6mbnnrf24q399q9bxmrz3sapj8n"; depends=[car lme4 lmerTest pbkrtest reshape2]; }; affluenceIndex = derive2 { name="affluenceIndex"; version="1.0"; sha256="1nb2dlsnvjsvkyrfdaskmpr3kv3qgdfb60xgmzvscfli0yf4dzr1"; depends=[]; }; afmToolkit = derive2 { name="afmToolkit"; version="0.0.1"; sha256="1pm3xyh9vq10mmfgknlvlfr9f027xprrgy1dvbbxpi7f111hv1gl"; depends=[assertthat DBI dplyr ggplot2 gridExtra minpack_lm scales tibble]; }; afpt = derive2 { name="afpt"; version="1.0.0"; sha256="0kshyzvw8sp7p686xi98g758zld3n7kq44lnvly8d0y8fg6ahcl2"; depends=[]; }; - aftgee = derive2 { name="aftgee"; version="1.1-2"; sha256="0g4skg333vdj0cxwkcn7sh1km9rbwjjz40qz211rlzr7x76477rx"; depends=[BB geepack MASS survival]; }; - agRee = derive2 { name="agRee"; version="0.5-1"; sha256="1hmqvpcz4vnpcl9f92q5fy1ca89l9sq25fnsw2mxfsa0yqbyxpw6"; depends=[coda lme4 miscF R2jags]; }; + aftgee = derive2 { name="aftgee"; version="1.1.3"; sha256="1zkb99938q8pp318a0c0bpgzcqxc8ijygfz904lz6n40c5i2i9lz"; depends=[BB geepack MASS survival]; }; + agRee = derive2 { name="agRee"; version="0.5-2"; sha256="1fhpkhnq8gbdy8k2w5wwn7h7gj0mmvk052fqxfazksxrlqicbbhb"; depends=[coda lme4 miscF R2jags]; }; aggregation = derive2 { name="aggregation"; version="1.0.1"; sha256="0j9g604m2ccc7hcy02539yja9cf3xcbl25gvp838bp4x8w18my46"; depends=[]; }; agop = derive2 { name="agop"; version="0.1-4"; sha256="1jwyl02z053rsdw9hryv1nyj9wlq310l51fghp1p0j51c159mlpx"; depends=[igraph Matrix]; }; - agriTutorial = derive2 { name="agriTutorial"; version="0.1.3"; sha256="1ihz92f10p7nq0rw01hka5wg2svf2hgx9f39604ab0j99z0f99hz"; depends=[emmeans ggplot2 lattice lmerTest nlme pbkrtest]; }; + agriTutorial = derive2 { name="agriTutorial"; version="0.1.4"; sha256="1abi6cdgh9k6x9vapca3gcf3hn1z9dsmw24as9i5i2c57q06b6qx"; depends=[emmeans ggplot2 lattice lmerTest nlme pbkrtest]; }; agricolae = derive2 { name="agricolae"; version="1.2-8"; sha256="1c6n52jralp33hl3nmpv9fc9vsvs6lcz9j75f2zbz0r4sqd2mw89"; depends=[AlgDesign cluster klaR MASS nlme spdep]; }; - agridat = derive2 { name="agridat"; version="1.15"; sha256="08wlh75jv856linkspx5w9irjlbjkhqy9wwaciks79s00ii5vbzj"; depends=[]; }; + agridat = derive2 { name="agridat"; version="1.16"; sha256="1kgmjrj207md86qivadkmv3s2gh3hi9zv63bsj8b9vlcd9f58pfk"; depends=[]; }; agrmt = derive2 { name="agrmt"; version="1.40.4"; sha256="1y2gnq6b4zkxknygg73r8qrd435y7c69iqn8i56kwk1ccc1rwddx"; depends=[]; }; agsemisc = derive2 { name="agsemisc"; version="1.3-1"; sha256="1905q35jgjhghlawql43yh296kbpysp927x3hj750yshz5zayzyr"; depends=[lattice MASS]; }; ahaz = derive2 { name="ahaz"; version="1.14"; sha256="1z7w5rxd5cya7kxhgxqvn72k87y33ginxra9g7j9wrfs5jgx6kvx"; depends=[Matrix survival]; }; ahnr = derive2 { name="ahnr"; version="0.3.1"; sha256="1g8m3q108ricfyn4fjjaihpr93xz7fm2sfzg3i0fz1n1i703jwm8"; depends=[ggplot2 magrittr matrixcalc pdist pracma purrr visNetwork]; }; ahp = derive2 { name="ahp"; version="0.2.12"; sha256="0zjhgl0smzx4bkhmdm4rmpyrq4hmxy1nkxvwqjr40pz7vm69icqx"; depends=[data_tree DiagrammeR formattable yaml]; }; - aiRthermo = derive2 { name="aiRthermo"; version="1.2"; sha256="0j7nldmf63rap18dfa5rcwyy61fcn592fb3h1hp08b00qw39asx3"; depends=[]; }; + ahpsurvey = derive2 { name="ahpsurvey"; version="0.2.2"; sha256="0y1afsxakfx6zfv4vjl54zgp5yqfl2haga08qbz9shjwsm28jw0p"; depends=[dplyr knitr magrittr Rdpack tidyr]; }; + aiRthermo = derive2 { name="aiRthermo"; version="1.2.1"; sha256="058082qdfi1pbdgf26vbfahri1kbc8b2l816q4dq89j5aj5is0a2"; depends=[]; }; aidar = derive2 { name="aidar"; version="1.0.5"; sha256="1q2iz2qzh2yl0v0sc537xq4vbx2nblym3kv419vr7jvrghdpx3vj"; depends=[XML]; }; aimPlot = derive2 { name="aimPlot"; version="1.0.0"; sha256="1d52b7kccxba6j7n0gbd7pzs0p87zn32vv8gdf2f7lyr75qzgz7x"; depends=[ggplot2]; }; - airGR = derive2 { name="airGR"; version="1.0.10.11"; sha256="0m64ww5f4ilrkkpnkv9k1qxsxh519is6y8wciq472jjfwcnsscb1"; depends=[]; }; - airGRteaching = derive2 { name="airGRteaching"; version="0.2.2.2"; sha256="13alnmazf8n7sgfzh0hfq6i4cd2pl414vwrakgp36q365fkgzpnc"; depends=[airGR dygraphs htmlwidgets markdown plotrix shiny shinyjs xts]; }; + airGR = derive2 { name="airGR"; version="1.0.15.2"; sha256="1lnqmf2rcj7hynlxnhb52jizx2c8b5bw04apgldg0bnr1jscn7pi"; depends=[]; }; + airGRteaching = derive2 { name="airGRteaching"; version="0.2.3.2"; sha256="1i3pkpf6h958m0jw90q6767svy7waikwqxiq6spqg02lmfw88swp"; depends=[airGR dygraphs htmlwidgets markdown plotrix shiny shinyjs xts]; }; aire_zmvm = derive2 { name="aire.zmvm"; version="0.6.1"; sha256="1a6aq1fkjj053mi36ibykncd1hmcl0f5c0l2fi0cbx6hcysc28ic"; depends=[dplyr httr lubridate progress readr readxl rvest sp stringr tidyr xml2]; }; - airr = derive2 { name="airr"; version="1.1.0"; sha256="0fyyd6sw3fk7gwdxhxxrvsckyxj9qlqqsa20rhqdg3xslkwzzpjh"; depends=[readr stringi yaml]; }; + airportr = derive2 { name="airportr"; version="0.1.2"; sha256="06jk4dhr4qj6fpmlvslnbqj67qy78spcb7yhqa4qn2im4kpmb73q"; depends=[dplyr]; }; + airr = derive2 { name="airr"; version="1.2.0"; sha256="1vswbjmyhygmyqymkfxad9nwsbcgaggian1fyrx63w0y9c4dfv1h"; depends=[readr stringi yaml]; }; ajv = derive2 { name="ajv"; version="1.0.0"; sha256="1qd5ncb7rdnnvqfknsvq9nrpxrh0zv3jyh4b91dcvfvhp262vfrm"; depends=[RJSONIO V8 yaml]; }; akima = derive2 { name="akima"; version="0.6-2"; sha256="1klprj4a2pgy5pwdwnrn3siisi2lh8hr4z6vz38sdvjkcmakxnk1"; depends=[sp]; }; akmeans = derive2 { name="akmeans"; version="1.1"; sha256="1nqbxbx583n0h2zmpy002rlmr6j86j6bg76xj5c69brrh59dpyw1"; depends=[]; }; alabama = derive2 { name="alabama"; version="2015.3-1"; sha256="0mlgk929gdismikwx4k2ndqq57nnqj7mlgvd3479b214hksgq036"; depends=[numDeriv]; }; - alakazam = derive2 { name="alakazam"; version="0.2.10"; sha256="0bfqc7rbchmj0dby8c8xlxff9gk18kq1v8zqfj3s7h3yddrr7znr"; depends=[dplyr ggplot2 igraph lazyeval progress Rcpp readr scales seqinr stringi]; }; - albopictus = derive2 { name="albopictus"; version="0.3"; sha256="03vk2df17rkcg29il3jj5jlnjs4kkfnj1cfrxdgj3hgm7rbs38si"; depends=[]; }; + alakazam = derive2 { name="alakazam"; version="0.2.11"; sha256="0p6rg09cxphp6mcbllwrvps4l9y2qssxhgxy6ryr4958gc1may16"; depends=[dplyr ggplot2 igraph lazyeval progress Rcpp readr scales seqinr stringi tidyr]; }; + albopictus = derive2 { name="albopictus"; version="0.4"; sha256="13njv26lbymfkir5wkbnr0nkbi65n15d96bqin27lzd5rj576bqr"; depends=[]; }; ald = derive2 { name="ald"; version="1.2"; sha256="1xmvxmyc1nmsrlyr0rvzz20jx6g1f2jvxpg9f39v48ngg5gmanjj"; depends=[]; }; alfred = derive2 { name="alfred"; version="0.1.6"; sha256="07x012lj33m0pmxdwk39ywrlvlfkp7mb203dwv8v88cxplhbaiq3"; depends=[dplyr jsonlite lubridate magrittr tibble tidyr]; }; algorithmia = derive2 { name="algorithmia"; version="0.0.2"; sha256="0kly70l9si8ni8n5xm30vai70pvfvip6354scvjqj34362s0lm0a"; depends=[base64enc httr rjson xml2]; }; @@ -4248,6 +4420,7 @@ in with self; { allelematch = derive2 { name="allelematch"; version="2.5"; sha256="1kws6y3igq6l85cfjrck2dzcfpgr56ridbc6w071h8kjw19mlzas"; depends=[dynamicTreeCut]; }; allelic = derive2 { name="allelic"; version="0.1"; sha256="0xs4kd3vqb5ph8kqc3lcqgirrdkz8b627pvnczvci2g0sr3cl18j"; depends=[]; }; alluvial = derive2 { name="alluvial"; version="0.1-2"; sha256="039frwrsxq1lb97s7vf2vbyyadimkigs628ymym06fxka53drdkp"; depends=[]; }; + alpaca = derive2 { name="alpaca"; version="0.2"; sha256="0hjy7irxa31kv92xvnj58zasmy4drbmaq6g1js4d5ns6d6fqx845"; depends=[data_table Formula MASS Rcpp RcppArmadillo]; }; alphaOutlier = derive2 { name="alphaOutlier"; version="1.2.0"; sha256="09yrbv7jsiymw5gzp8p92ki70v1fys2k75x4sb9s7wy3c58wn1cd"; depends=[nleqslv quantreg Rsolnp]; }; alphabetr = derive2 { name="alphabetr"; version="0.2.2"; sha256="1pmp6zwhgycb38y5jbvrbv2nza7gyjh508vy09ml483c2cysvc1r"; depends=[clue dplyr multicool Rcpp]; }; alphahull = derive2 { name="alphahull"; version="2.1"; sha256="129b2j9j60p2wvbb8703x18pydv1g715vmjcb1a80v70i93w4f49"; depends=[ggplot2 R_utils sgeostat spatstat splancs tripack]; }; @@ -4260,18 +4433,20 @@ in with self; { altmeta = derive2 { name="altmeta"; version="2.2"; sha256="1k3p06v8ccj0dbjfpl4nw6579bwcy4j925rk15v55khqmrlx780l"; depends=[]; }; amap = derive2 { name="amap"; version="0.8-16"; sha256="1qnl2x98x64iaipkx5126rsddq2sx5ml43h75xyiyn30yvbmlxyk"; depends=[]; }; ambhasGW = derive2 { name="ambhasGW"; version="0.0.2"; sha256="0v517i4whip45pk6bwlwval9pz367pcgzz62b2z22mrwgi6m6bck"; depends=[raster rgdal yaml]; }; + ambient = derive2 { name="ambient"; version="0.1.0"; sha256="142q30rhi0wz0gp1v0swm83gbli8j6plpzzpqjwnjc693wd3a1ih"; depends=[Rcpp]; }; ameco = derive2 { name="ameco"; version="0.2.9"; sha256="0vzwsy7gp17ghl1hgcsbfs9rarzl8dl36x6lplnzrisqv3dqmk25"; depends=[]; }; amelie = derive2 { name="amelie"; version="0.2.0"; sha256="01v93dswr9nk0kvq50jri4568w17pwkcn64xbpzn2p4c7w6gqkhh"; depends=[]; }; amen = derive2 { name="amen"; version="1.3"; sha256="1qaznfmnh3dlnp41afd37lr328qzy50hn8hi0c302wj0f992ycqg"; depends=[]; }; aml = derive2 { name="aml"; version="0.1-1"; sha256="09xxlxp784wlb561apns3j8f2h9pfk497cy5pk8wr4hhqqv4d3al"; depends=[lars]; }; + ammistability = derive2 { name="ammistability"; version="0.1.0"; sha256="00wcc84i9p8fmjjhhpi8435min5m749gsmvnh98zci9qk8glx4pl"; depends=[agricolae ggcorrplot ggplot2 Rdpack reshape2]; }; ampd = derive2 { name="ampd"; version="0.2"; sha256="0bi8qngd37n60ym516yjcahxc536vdwm60rq5ld32170hww69j7c"; depends=[]; }; - amt = derive2 { name="amt"; version="0.0.4.0"; sha256="1qdkvkxkxk7l2bjr11h0k9vhh5vapvm12f20lmj7rhamipc43ybv"; depends=[broom circular dplyr fitdistrplus FNN geosphere KernSmooth lazyeval leaflet lubridate magrittr maptools purrr raster Rcpp rgeos rlang sp survival tibble tidyr]; }; - anMC = derive2 { name="anMC"; version="0.2.0"; sha256="1j6dah49sgfsb7bj4xys5rcaqw12rrkqhqryqz2xhdkazjmz3gpq"; depends=[mvtnorm Rcpp RcppArmadillo]; }; + amt = derive2 { name="amt"; version="0.0.5.0"; sha256="0p7k9g9wkd6kmf5pid8kgni1ilb6vrn7gb38l8g47zpwx5wg4zhf"; depends=[broom circular dplyr fitdistrplus FNN geosphere KernSmooth lazyeval leaflet lubridate magrittr maptools purrr raster Rcpp rgeos rlang sf sp survival tibble tidyr velox]; }; + anMC = derive2 { name="anMC"; version="0.2.1"; sha256="02mzmaxjjbjqarfwdv6465p5hvnnpsqfkb1wkm68bx64cimgldki"; depends=[mvtnorm Rcpp RcppArmadillo]; }; anacor = derive2 { name="anacor"; version="1.1-3"; sha256="0mj8g9p4fla0ax9jvcq7kii4lrhj8g872p11nys06anva22qjp51"; depends=[car colorspace fda]; }; analogsea = derive2 { name="analogsea"; version="0.6.0"; sha256="1fcvf3yci3szm155pnk89q36dgc55wdlffvll642zn26zc5d1y5n"; depends=[aws_s3 httr jsonlite magrittr yaml]; }; - analogue = derive2 { name="analogue"; version="0.17-0"; sha256="00wk4jnzif28ibx9s3m68qdx64ycdgg5yr6ybb0srlydikvf1sy8"; depends=[brglm lattice MASS mgcv princurve vegan]; }; + analogue = derive2 { name="analogue"; version="0.17-1"; sha256="09xv6dxdlc5kwsbh9vzp2mnxgbccimiadjpj12iiw6hcplw6v4ma"; depends=[brglm lattice MASS mgcv princurve vegan]; }; analogueExtra = derive2 { name="analogueExtra"; version="0.1-1"; sha256="1s3qs10hf6hkna0bicid1mc8x8r449bl93xpgyw6lnsjgh2yx62c"; depends=[analogue rgl vegan3d]; }; - analytics = derive2 { name="analytics"; version="2.0"; sha256="1jkdjqc3fnvvsgi6x9ncf36rxzq0a55cmgkcv92mfmpcramg2lk6"; depends=[car cluster fractal lmtest MASS np powerplus robust trend TSA urca]; }; + analytics = derive2 { name="analytics"; version="3.0"; sha256="0js3c8lwj3knccb55nq03cbjlf4w390p9aid2mi5x80l3ayd9in1"; depends=[car cluster fractal lmtest MASS np powerplus robust trend TSA urca VIM]; }; analyz = derive2 { name="analyz"; version="1.4"; sha256="0qdh1gld2dkl0krbhm2vcqg8dfs03dn51rclgsw02554s06dlgxw"; depends=[]; }; anchoredDistr = derive2 { name="anchoredDistr"; version="1.0.3"; sha256="07q4np0zryb49cpi7w5iz0qna63cyp9nz13d8ws6x9ccg417r99a"; depends=[DBI dplyr ggplot2 np plyr reshape2 Rmisc RSQLite]; }; anchors = derive2 { name="anchors"; version="3.0-8"; sha256="12gd2526y7s2a8i6b9xma2c3sc6zxnwzl6sn8b50hbxizwr8d34j"; depends=[MASS rgenoud]; }; @@ -4284,44 +4459,45 @@ in with self; { animalTrack = derive2 { name="animalTrack"; version="1.0.0"; sha256="0jlvfflpaq64s48sblzh1n1vx8g3870iss97whigri29s6hn79ry"; depends=[rgl]; }; animation = derive2 { name="animation"; version="2.5"; sha256="0pxmihfr3q1hh4cdnzf7wbzqak5spa3kv4p1wl89giqqngqzwcmj"; depends=[]; }; anipaths = derive2 { name="anipaths"; version="0.9.6"; sha256="0wqpnn85gqsy0m40allx0mngnq5lqz5qhl9g8v0kh0073xq4mvvc"; depends=[animation knitr mgcv RColorBrewer rgdal scales sp]; }; - annovarR = derive2 { name="annovarR"; version="1.0.0"; sha256="0l2csp06m5f3i1b4h0pvl8mmzx25c0b411c5sdc3qszirbplh038"; depends=[AnnotationDbi BioInstaller configr data_table DBI futile_logger glue ngstk RMySQL RSQLite stringi stringr vcfR]; }; anocva = derive2 { name="anocva"; version="0.1.1"; sha256="1byg40jla71k1901js5h9yq89j63d00vkm60id1fxlpv95c4wdrr"; depends=[cluster]; }; anoint = derive2 { name="anoint"; version="1.4"; sha256="10gdqgag9pddvxh80h458gagvv1474g4pcpa71cg3h7g62rqvmv5"; depends=[glmnet MASS survival]; }; anomalize = derive2 { name="anomalize"; version="0.1.1"; sha256="1szxjc8bh616z2xc50hcggh4ky1b7343i3xmg81rbssvkl2gghlh"; depends=[dplyr ggplot2 glue purrr rlang sweep tibble tibbletime tidyr timetk]; }; - anomaly = derive2 { name="anomaly"; version="1.0.0"; sha256="1l86y3hzqi06s1v3l5vkvk679cy630i2pj0yzxyznm5fjq43l47r"; depends=[dplyr Rdpack rlang]; }; + anomaly = derive2 { name="anomaly"; version="1.1.0"; sha256="0v1pgyckqkimyh1hh68clyqnm9hkzmz3dal676l9qaiwbgqmkxi4"; depends=[dplyr ggplot2 Rdpack rlang]; }; anomalyDetection = derive2 { name="anomalyDetection"; version="0.2.5"; sha256="132wb0xz04zib3x7802b2q546rkf097rsxyi9mi86g6vv7yyw9z1"; depends=[caret dplyr ggplot2 gmp magrittr MASS plyr purrr Rcpp RcppArmadillo tibble tidyr]; }; anominate = derive2 { name="anominate"; version="0.6"; sha256="01p2qkqf88bzhwywyass5r8dwg2ycflmkbzmsps7fzy0kv3xyb02"; depends=[coda MCMCpack pscl wnominate]; }; anonymizer = derive2 { name="anonymizer"; version="0.2.0"; sha256="0zlzxcqy8fjhh6ab58a1pi0k686dzgap58d160ms6bsr5mgn3fbf"; depends=[]; }; - antaresProcessing = derive2 { name="antaresProcessing"; version="0.15.3"; sha256="0asr43lf8vajf72sgpixy5w7r7v7b83a0877q6dadcxxr4mifr8f"; depends=[antaresRead data_table]; }; - antaresRead = derive2 { name="antaresRead"; version="2.1.2"; sha256="1vw2q2affpi4icqbsh89qkhdf6xxfjnwn6939ibgw5vv8df1b11s"; depends=[data_table lubridate plyr shiny stringr]; }; - antaresViz = derive2 { name="antaresViz"; version="0.14.0"; sha256="0xli4bvk5nds357wq3r1dp155xrcxcjscndbysfdv52827i80nxs"; depends=[antaresProcessing antaresRead assertthat data_table dygraphs geojsonio htmltools htmlwidgets leaflet leaflet_minicharts lubridate manipulateWidget plotly rAmCharts raster rgeos shiny sp spMaps webshot]; }; + antaresProcessing = derive2 { name="antaresProcessing"; version="0.16.0"; sha256="1wbrp07j8518p53yismij5mylxz34r3n8k4f7k8aj43armavkmxk"; depends=[antaresRead data_table]; }; + antaresRead = derive2 { name="antaresRead"; version="2.2.1"; sha256="0j94waw0pq9fni4kpmcry354fwpqg64k9si5p3zgcrxhx3ah2dp5"; depends=[bit64 data_table lubridate plyr shiny stringr]; }; + antaresViz = derive2 { name="antaresViz"; version="0.15.0"; sha256="16gf5spgx56rgf2d25zv5dihhbbgvfxryswfqa4gjlpjc2827zar"; depends=[antaresProcessing antaresRead assertthat data_table dygraphs geojsonio htmltools htmlwidgets leaflet leaflet_minicharts lubridate manipulateWidget plotly rAmCharts raster rgeos shiny sp spMaps webshot]; }; antitrust = derive2 { name="antitrust"; version="0.99.10"; sha256="1xgkbsnsn39s37my7sj917kvq67gxwai7k7lym2i18m60cnz0ilb"; depends=[BB evd MASS numDeriv]; }; - antiword = derive2 { name="antiword"; version="1.1"; sha256="0nbx2l0d2y4qvcw4dw3m26zfkgdmav4cq0l00gib7l3y9pqxzjh5"; depends=[sys]; }; + antiword = derive2 { name="antiword"; version="1.2"; sha256="0715ykn1ik6x8qgmdw39adkxark4i5p9wpk7cirk8hz1g2qx6kij"; depends=[sys]; }; + anyLib = derive2 { name="anyLib"; version="1.0.4"; sha256="11x9af3j008kxxsy151894ph0lwrkzxq78z6bvwzwqzdqlsvnv3f"; depends=[BiocInstaller curl devtools httr withr]; }; + anyflights = derive2 { name="anyflights"; version="0.1.0"; sha256="14mmzyhm8nz2xjs7bfyihgvy0an01lpv6hn9dxcqvbcsc7vfmigs"; depends=[dplyr httr lubridate RCurl readr tibble]; }; anytime = derive2 { name="anytime"; version="0.3.1"; sha256="1ibpmdq8i9ch06484ql0sdwfrs6smz40qnnw523pb0ryly6q9h16"; depends=[BH RApiDatetime Rcpp]; }; aod = derive2 { name="aod"; version="1.3"; sha256="1a6xs5d5289w69xd2salsxwikjjhjzvsnplqrq78b1sr6kzfyxz3"; depends=[]; }; - aods3 = derive2 { name="aods3"; version="0.4-1"; sha256="074c16wmgd1vc2yvwx1y84bg55hvmm5yi8zgpwh51jcsbqlhbpgn"; depends=[boot lme4]; }; + aods3 = derive2 { name="aods3"; version="0.4-1.1"; sha256="1kdmgzd5nkzm0awdjls6fc8p9hxsph9ha9k1jxbppdi4i6f0i7rv"; depends=[boot lme4]; }; aoos = derive2 { name="aoos"; version="0.5.0"; sha256="0y92vs27i0mkpjdclqzq4j9g1axkymhi3v8xp1v6hazh35yzjkfj"; depends=[magrittr roxygen2]; }; aop = derive2 { name="aop"; version="1.0.0"; sha256="1i3mixiwcvqygbcvj6f9vm223plmydzmixpy6nhis2zv9d90vakd"; depends=[ggplot2 graph igraph plyr Rgraphviz rjson]; }; aoristic = derive2 { name="aoristic"; version="0.6"; sha256="0b9h2l59vvrvbjjwwb43j74frvwa8lsj4x5kwhwpsfjfch1yqwjl"; depends=[classInt ggplot2 GISTools lubridate maptools MASS plotKML RColorBrewer reshape2 rgdal sp spatstat]; }; apTreeshape = derive2 { name="apTreeshape"; version="1.5-0"; sha256="0mnydk157557pnkjvcadlghn5d8w9kxas4kwz4y4w21xg7z1jrig"; depends=[ape coda cubature pbapply quantreg]; }; - apa = derive2 { name="apa"; version="0.2.0"; sha256="1f9c8m5z8j7mbmbh61vcs680ya1zq5spwqs90zhajaw5fhvlg8km"; depends=[dplyr magrittr purrr rmarkdown stringr]; }; - apaTables = derive2 { name="apaTables"; version="2.0.4"; sha256="1msb8aygzbcggdcifmcjpgcpnscvr6fq2ib5afff1vzbas9hjrs3"; depends=[boot broom car dplyr tibble]; }; + apa = derive2 { name="apa"; version="0.3.0"; sha256="0bpg2nf6838mb2apj2wqi1gbn3zbm7lsixykgkzr539rcdjfdggd"; depends=[dplyr magrittr purrr rmarkdown stringr]; }; + apaTables = derive2 { name="apaTables"; version="2.0.5"; sha256="0h986jqdl65fd33gfa433ik77r6lm9zrq75qfk5r8xsdgzb4wgva"; depends=[boot broom car dplyr tibble]; }; apaText = derive2 { name="apaText"; version="0.1.1"; sha256="1r217k60w027i63nbj24b1rm37m4qf7a6iirc941s945babkxcmb"; depends=[dplyr]; }; apc = derive2 { name="apc"; version="1.3"; sha256="1hgkqkvry9is8kjk2w46k637sig7fdznnc75wbrc8bq1hbrmf785"; depends=[lattice]; }; apcluster = derive2 { name="apcluster"; version="1.4.7"; sha256="188hdfmwjjx3aic599nwmkzjqm9j9jighi5bly6qd43c1vj6ih2s"; depends=[Matrix Rcpp]; }; apdesign = derive2 { name="apdesign"; version="1.0.0"; sha256="041zyd7ih9nnj92jj9vb9ya1ij9lmj1dzx64q74vyiadw1ix5l66"; depends=[Matrix]; }; - ape = derive2 { name="ape"; version="5.1"; sha256="0vm2065993wf4hdqarxqykhfz9aaj0rrb98alhkq4qw1d2kdrmdp"; depends=[lattice nlme Rcpp]; }; + ape = derive2 { name="ape"; version="5.2"; sha256="05b4yka5cirdgxd4d7iiaqvr428pk3j6n9q6dvg5j38kdj2h5sr7"; depends=[lattice nlme Rcpp]; }; apercu = derive2 { name="apercu"; version="0.2.3"; sha256="0w9hi8pdjb3nschh4cy387q67jxhkl2bn9vir949rsl831x4cs1j"; depends=[pls]; }; apex = derive2 { name="apex"; version="1.0.3"; sha256="157i67yvb9xqlhzcgkxj7n5lq65svxs82z38dv2c0k8p4krjl1pd"; depends=[adegenet ape phangorn]; }; - aphid = derive2 { name="aphid"; version="1.1.0"; sha256="0mf2v7b915hpasic2yqxi0g5fcrwac4d1ycikwzcd9hb9qngcb0n"; depends=[kmer openssl Rcpp]; }; + aphid = derive2 { name="aphid"; version="1.3.0"; sha256="13h5vwxrw74drw8ai8y0i3c20kdhbybaa3zyplrnlsa2yzzdhqa2"; depends=[kmer openssl Rcpp]; }; aplore3 = derive2 { name="aplore3"; version="0.9"; sha256="0af6klscsxvh4amp519b6r41bzysf61p040fj4l5706bbya1arhw"; depends=[]; }; aplpack = derive2 { name="aplpack"; version="1.3.2"; sha256="14vwzzshsgkw6gxwnnf6h9fixnwp3g8pd3rv6qjr0y8gis1lmjbg"; depends=[]; }; - apmsWAPP = derive2 { name="apmsWAPP"; version="1.0"; sha256="1azgif06dsbadwlvv9nqs8vwixp6balrrbpj62khzmv1jvqr4072"; depends=[Biobase DESeq edgeR genefilter gtools multtest seqinr]; }; + apmsWAPP = derive2 { name="apmsWAPP"; version="1.0"; sha256="1azgif06dsbadwlvv9nqs8vwixp6balrrbpj62khzmv1jvqr4072"; depends=[aroma_light Biobase DESeq edgeR genefilter gtools multtest seqinr]; }; apng = derive2 { name="apng"; version="1.0"; sha256="13hvr1w566anrhdicaqwqjgfq2lk3zkn5gcfgy8zazjnad4vy07y"; depends=[bitops]; }; appell = derive2 { name="appell"; version="0.0-4"; sha256="0g7pzhxqgscnyf07xycbrpyimp1z1hljgcr3nqigpx09w7zi5wlw"; depends=[]; }; apple = derive2 { name="apple"; version="0.3"; sha256="194z2f6hwdjjxdkjwlmfhpfp26p9yp3gparklhdbb6zlb4a9nnhz"; depends=[MASS]; }; appnn = derive2 { name="appnn"; version="1.0-0"; sha256="0wkpr6lcd68wlzk6n622ab7sd99l837073czn4k56hw8bw9v68j3"; depends=[]; }; - approximator = derive2 { name="approximator"; version="1.2-6"; sha256="165qvx5946wkv1qsgbmjhmwvik7m23r1vbpnp7claylflgj1ycnm"; depends=[emulator]; }; + approximator = derive2 { name="approximator"; version="1.2-7"; sha256="0smqjdla9mvzy164nsb0pw0sgal3w2wnyhqidp74h0smyczrr1zw"; depends=[emulator mvtnorm]; }; approxmatch = derive2 { name="approxmatch"; version="1.0"; sha256="1z1lrbfvm380p2az88hrxr3f2cgbv2h70wzm99vi9a2dmh0pl7qy"; depends=[]; }; aprean3 = derive2 { name="aprean3"; version="1.0.1"; sha256="17rnq02sncl6rzwyln10200s43b8z1s2j0kdi9kgcb6qr51v12rv"; depends=[]; }; apricom = derive2 { name="apricom"; version="1.0.0"; sha256="1gyd1yln14cn0iswj7sjs4hav6j6d4f3ncps4gqbci5fwha5blcr"; depends=[logistf penalized rms shrink]; }; @@ -4331,7 +4507,7 @@ in with self; { apt = derive2 { name="apt"; version="2.5"; sha256="1y18bqnnxy5p0xx9gbfrnrzq3nlhw3psl5zlibrw6lfhb8lxd4mk"; depends=[car copula erer gWidgets urca]; }; aptg = derive2 { name="aptg"; version="0.1.0"; sha256="06z8041h1k9v0ymd7azn11xzhqxb8lda4r7nyg51h8z3i8mpq1ba"; depends=[ape brranching phytools taxize xml2]; }; aqfig = derive2 { name="aqfig"; version="0.8"; sha256="0ha0jb5ag3zx6v7c63lsm81snslzb8y8g565mxjmf7vxpcmzzqsi"; depends=[geoR]; }; - aqp = derive2 { name="aqp"; version="1.16"; sha256="11ksjvvwazan2xk535ygrk8qs66ny6fywfgw2mpy8kv2637l9pay"; depends=[cluster digest Hmisc lattice MASS plotrix plyr RColorBrewer reshape scales sp stringr]; }; + aqp = derive2 { name="aqp"; version="1.16-3"; sha256="16b7yshsi5cwd8spvjmlnnnyvcvkxjcsjkwxizpxjwzy3fdkc4g6"; depends=[cluster digest Hmisc lattice MASS plotrix plyr RColorBrewer reshape scales sp stringr]; }; aqr = derive2 { name="aqr"; version="0.4"; sha256="04frgil3nbxsww66r9x0c6f308pzqr1970prp20bdv9qm3ym5axw"; depends=[RCurl xts]; }; arabicStemR = derive2 { name="arabicStemR"; version="1.2"; sha256="1vflynbi7aln7x2p4jg9gsvfrxn4v6qkb4wbrzxmj561lqy9fcay"; depends=[]; }; arc = derive2 { name="arc"; version="1.2"; sha256="1advs0aqxh84c5n9akww8cdafh7npgaibrb42wncwhv9nfi7wy1v"; depends=[arules discretization Matrix R_utils]; }; @@ -4339,16 +4515,18 @@ in with self; { archetypes = derive2 { name="archetypes"; version="2.2-0"; sha256="1djzlnl1pjb0ndgpfj905kf9kpgf9yizrcvh4i1p6f043qiy0axf"; depends=[modeltools nnls]; }; archiDART = derive2 { name="archiDART"; version="3.2"; sha256="08jam0nbqvrgrxjqj24k7f0dybyi935w977yi1qk34q1p48462ph"; depends=[rgl sp XML]; }; archivist = derive2 { name="archivist"; version="2.3.1"; sha256="04f1f9fczibda2a4wivmgwzh5p9xblm9hk8wkgd6xqrvxgv5z8mn"; depends=[DBI digest flock httr lubridate magrittr RCurl RSQLite]; }; - archivist_github = derive2 { name="archivist.github"; version="0.2.2"; sha256="04xb2i47y12ic87gb2l30bldil0505h7s9601hq0afjg3npx6jq7"; depends=[archivist digest git2r httr jsonlite]; }; + archivist_github = derive2 { name="archivist.github"; version="0.2.6"; sha256="092fzi505vx9xbk41m86d0isxna42iflp7q2kjiqa6z1ccvim2yx"; depends=[archivist digest git2r httr jsonlite]; }; areaplot = derive2 { name="areaplot"; version="1.2-0"; sha256="0xzfgbnzqsvnq46nsxwyqrwldbaqns3h5np0f5wxpjda9cy2rna1"; depends=[]; }; + arena2r = derive2 { name="arena2r"; version="1.0.0"; sha256="14zjpglp389pldi436935fz6mgi4jdgfii1m035nsvihrms9gqkh"; depends=[dplyr ggplot2 magrittr purrr rlang shiny shinyBS shinydashboard shinyjs tidyr]; }; arf3DS4 = derive2 { name="arf3DS4"; version="2.5-10"; sha256="12cbrk57c9m7fj1x7nfmcj1vp28wj0wymsjdz8ylxhm3jblbgmxc"; depends=[corpcor]; }; - arfima = derive2 { name="arfima"; version="1.6-7"; sha256="0wajd15lbzbc62v8kclnp0fbppnm7vy2zxrsd5njx5sswvkfx5v3"; depends=[ltsa]; }; + arfima = derive2 { name="arfima"; version="1.6-8"; sha256="0ym86wzwdlxrx987ibaspqmjq6i3j5cx3w04dlia5js1siyq9clp"; depends=[ltsa]; }; argon2 = derive2 { name="argon2"; version="0.2-0"; sha256="0kqn06rpb39jlzizjlnc5c44mfic8llrshxn7ljgmyj35lbqwxqh"; depends=[]; }; argosfilter = derive2 { name="argosfilter"; version="0.63"; sha256="0rrc2f28hla0azw90a5gk3zj72vxhm1b6yy8ani7r78yyfhgm9ig"; depends=[]; }; argparse = derive2 { name="argparse"; version="1.1.1"; sha256="0fzrbj87b274vf96azdnsjxk2nf45d5wy58vzmlah4b4h7q4j524"; depends=[findpython getopt jsonlite proto]; }; argparser = derive2 { name="argparser"; version="0.4"; sha256="0s1wxshx4jk69wfxhycx973q6y8cmqrfymyjklhq1i8xrj0kmmx9"; depends=[]; }; ari = derive2 { name="ari"; version="0.1.0"; sha256="05pva8jp7dhl46dm1fha6f8mavrs76a6c491fq3mavly8qcbgx44"; depends=[aws_polly progress purrr rmarkdown rvest tuneR webshot xml2]; }; aricode = derive2 { name="aricode"; version="0.1.1"; sha256="0c9k6bp0zdm4l28ga19x8v30x3zw0fbcf7wicnn15xc516glfb2j"; depends=[Matrix Rcpp]; }; + arkdb = derive2 { name="arkdb"; version="0.0.4"; sha256="0flcpka5s26gnf7kh1c76ak832h4iyh0012a1w0d805j5dhf67z6"; depends=[DBI progress]; }; arm = derive2 { name="arm"; version="1.10-1"; sha256="0vvp90jygajd6ydky57z66wqjq9msfbl88irj5jbsray574mh4bg"; depends=[abind coda lme4 MASS Matrix nlme]; }; arnie = derive2 { name="arnie"; version="0.1.2"; sha256="14xkgyfn9zvkbgram15w7qzqc5pl1a8ig66cif7a79najrgd914r"; depends=[]; }; aroma_affymetrix = derive2 { name="aroma.affymetrix"; version="3.1.1"; sha256="1x2lwdabvh7cjdy57jrnbdb7s9vxs18zyvfzwavi2pgldqz6v2aw"; depends=[aroma_apd aroma_core future listenv MASS matrixStats R_cache R_devices R_filesets R_methodsS3 R_oo R_utils]; }; @@ -4356,19 +4534,19 @@ in with self; { aroma_cn = derive2 { name="aroma.cn"; version="1.6.1"; sha256="1d9g81b12a3m03wrvb3cvg33fjybgiabpxhci2y2rr6diay42pmr"; depends=[aroma_core matrixStats PSCBS R_cache R_filesets R_methodsS3 R_oo R_utils]; }; aroma_core = derive2 { name="aroma.core"; version="3.1.3"; sha256="0zikic3hqfn00kgb0078paikz4bdcqq0qygvl4xbvq48868wcz1q"; depends=[future listenv matrixStats PSCBS R_cache R_devices R_filesets R_methodsS3 R_oo R_rsp R_utils RColorBrewer]; }; arrApply = derive2 { name="arrApply"; version="2.0.1"; sha256="007fsqgb9bsr4mscljhp37dvrk7cv6nrb7y28w8kc7mxvgdq29wg"; depends=[Rcpp RcppArmadillo]; }; - arrangements = derive2 { name="arrangements"; version="1.0.2"; sha256="0vqxx0pzvvqnbklpxrcq7d5ppicwbwk3gb2846in0gqjhn4ya4g1"; depends=[gmp R6]; }; + arrangements = derive2 { name="arrangements"; version="1.1.4"; sha256="04l63br7a93qgiaglzmxpjw03y5p05jihlbbshy9cb7lg3rdld6m"; depends=[gmp R6]; }; arrayhelpers = derive2 { name="arrayhelpers"; version="1.0-20160527"; sha256="1ib91hpg6xgy0jr4sb8ib19x0v4f5n96lak0qm0z5vksawgcnp1l"; depends=[svUnit]; }; - ars = derive2 { name="ars"; version="0.5"; sha256="0m63ljb6b97kmsnmh2z5phmh24d60iddgz46i6ic4rirshq7cpaz"; depends=[]; }; - arsenal = derive2 { name="arsenal"; version="1.2.0"; sha256="1glh8vyms5hcplzzn5n6fynr8jyryy65xb2y9lf6nv7kziwqr5fk"; depends=[testthat]; }; + ars = derive2 { name="ars"; version="0.6"; sha256="0zs1rk3i7pc9wcvxrvjcls194mfbvmkz7cb6pwd1cm3fzjwsyxsp"; depends=[]; }; + arsenal = derive2 { name="arsenal"; version="1.4.0"; sha256="1hd1nx5nzpswi5903vkkhf4ap4pk5gjxj45xc8z0wngp4xrjv4a4"; depends=[testthat]; }; artfima = derive2 { name="artfima"; version="1.5"; sha256="1nqsq9fsqk9kag9n7i2r9yvf578nkdfrkkv7qy8650prka0jca2p"; depends=[gsl ltsa]; }; arules = derive2 { name="arules"; version="1.6-1"; sha256="0glfqgxr87900kigmkby2ff7qrjvd6aq595q85y056i5ckjcp615"; depends=[Matrix]; }; arulesCBA = derive2 { name="arulesCBA"; version="1.1.3-1"; sha256="0k41m966m2x8xjzvpy6xn4whn9l2dpvidyh39kmhyvya87ibhyg8"; depends=[arules discretization Matrix testthat]; }; arulesNBMiner = derive2 { name="arulesNBMiner"; version="0.1-5"; sha256="1q4sx6c9637kc927d0ylmrh29cmn4mv5jxxpl09yaclzfihjlk9a"; depends=[arules rJava]; }; - arulesSequences = derive2 { name="arulesSequences"; version="0.2-19"; sha256="1cncvrf7za38b3vdwbzy4yrbakj7jbpxrl1jg6bvjnlkymiajavx"; depends=[arules]; }; + arulesSequences = derive2 { name="arulesSequences"; version="0.2-20"; sha256="0qgsf1wbdw4yqcnbczi2kcvb6vg9f4gy403qds1qh4129yrjyvy9"; depends=[arules]; }; arulesViz = derive2 { name="arulesViz"; version="1.3-1"; sha256="0lz6dl7ywzbyviib97s48namr6cjjn98anblfpigzaq16zkf2pxl"; depends=[arules colorspace DT igraph plotly scatterplot3d seriation vcd visNetwork]; }; asVPC = derive2 { name="asVPC"; version="1.0.2"; sha256="07nfwr0lsfpwgfdgzcdn1svw8dnjfni5ga9q77yjd1bj0wf76ci2"; depends=[ggplot2 plyr]; }; asaur = derive2 { name="asaur"; version="0.50"; sha256="0c1rgic76w3i2xhna7i52lyc0p01s5b1mxyn55gqw6i19v9mq0b3"; depends=[]; }; - asbio = derive2 { name="asbio"; version="1.5"; sha256="0p54a9x54jg81hd86br6b3dg3sr9kzl9rmnrh7x3m6bkinzc780c"; depends=[deSolve lattice multcompView mvtnorm pixmap plotrix scatterplot3d]; }; + asbio = derive2 { name="asbio"; version="1.5-3"; sha256="0k4cyivh08p9psp0z07nqa04i7xcqf4gh7x0vfk17rvycywksbhy"; depends=[deSolve lattice multcompView mvtnorm pixmap plotrix scatterplot3d]; }; ascii = derive2 { name="ascii"; version="2.1"; sha256="19dfbp7k4bjxjn8wdzhbmz7g3za6gn8vcnd5qkm4dz7gg1fg7b8p"; depends=[]; }; asciiSetupReader = derive2 { name="asciiSetupReader"; version="1.4.0"; sha256="0pq23ncwlndhzw4qfvzcv9nh74fq6hh9k6w96xhxx69ajy9zd2ys"; depends=[data_table haven readr stringr zoo]; }; asciiruler = derive2 { name="asciiruler"; version="0.2"; sha256="0xhkbsy9dypk09avazgxczyfkh3rhdxhwci688dw1lxnhxv1hj24"; depends=[stringr]; }; @@ -4376,9 +4554,9 @@ in with self; { asdreader = derive2 { name="asdreader"; version="0.1-3"; sha256="15a922aw0v5w4hrha03xifx8cpifcc773gambgwqq6i5nz08ya26"; depends=[]; }; ash = derive2 { name="ash"; version="1.0-15"; sha256="1ay2a2agdmiz7zzvn26mli0x0iwk09g5pp4yy1r23knhkp1pn2lb"; depends=[]; }; ashr = derive2 { name="ashr"; version="2.2-7"; sha256="1bgkzab7f7fqi259vxrpkxq8yzhh1sl3mqdzc73dk54c5849b2pz"; depends=[assertthat doParallel etrunct foreach Matrix pscl Rcpp SQUAREM truncnorm]; }; - asht = derive2 { name="asht"; version="0.9.3"; sha256="075gzxly8sqkbwnznxcr4z3zs1qvlyl8c4ishgxk035ik1w6p16n"; depends=[bpcp coin exact2x2 exactci perm ssanv]; }; + asht = derive2 { name="asht"; version="0.9.4"; sha256="1aq384vgf26ig3isyp99z09glcjhl2qd43kp8qdcwk75dcrmxd7z"; depends=[bpcp coin exact2x2 exactci perm ssanv]; }; aslib = derive2 { name="aslib"; version="0.1"; sha256="0dkb6bb6dqavjklbciqxqhi3fdqib9asdnhiap2gp9b9wfnkyq7k"; depends=[BatchExperiments BatchJobs BBmisc checkmate corrplot ggplot2 llama mlr parallelMap ParamHelpers plyr reshape2 RWeka stringr yaml]; }; - asnipe = derive2 { name="asnipe"; version="1.1.9"; sha256="0r6hajdvasvik2ij58xm5kvlcz2gqzgqbvw0ypghrp0qkfqxkrla"; depends=[MASS Matrix]; }; + asnipe = derive2 { name="asnipe"; version="1.1.10"; sha256="1n53aqajra3rp202jz1xciw7nppicxkpiq4ybay768n3mxlvlhjr"; depends=[MASS Matrix]; }; aspace = derive2 { name="aspace"; version="3.2"; sha256="1g51mrzb6amafky2kg2mx63g6n327f505ndhna6s488xlsr1sl49"; depends=[Hmisc shapefiles splancs]; }; aspect = derive2 { name="aspect"; version="1.0-5"; sha256="0pbc0daxw20xcbgqyyd5gbs9kmbaf2dq8ajllx0mnfwdcak9jfgj"; depends=[]; }; aspi = derive2 { name="aspi"; version="0.2.0"; sha256="0rhvxw243vvdv3hxa6pi343gcjc2cbxq1jzqirl9k1l4i3897l87"; depends=[]; }; @@ -4386,14 +4564,14 @@ in with self; { assertable = derive2 { name="assertable"; version="0.2.4"; sha256="1d1mc5k9jwn2h5bny3bpkwy10kfz5qlp03z12z9401v47q12d61i"; depends=[data_table]; }; assertive = derive2 { name="assertive"; version="0.3-5"; sha256="0blbbhlxcb5ffdxqxi62xs33ljiawh6s22a0pyvbbh79jf46rzr3"; depends=[assertive_base assertive_code assertive_data assertive_data_uk assertive_data_us assertive_datetimes assertive_files assertive_matrices assertive_models assertive_numbers assertive_properties assertive_reflection assertive_sets assertive_strings assertive_types knitr]; }; assertive_base = derive2 { name="assertive.base"; version="0.0-7"; sha256="1xs3ysvj0z57c58jw57pckq2rynia6ks4rmjmc02alczhk54wbgh"; depends=[]; }; - assertive_code = derive2 { name="assertive.code"; version="0.0-1"; sha256="0drdrc9ljznkz52lvpwx0mvrghl0wf6dffzc3msz8lnvraxmanyw"; depends=[assertive_base assertive_properties assertive_types]; }; + assertive_code = derive2 { name="assertive.code"; version="0.0-3"; sha256="1qhbp668zfvhqs8avkhg9amp4zyazz6dsy4fc6kpdmw3sv8yi07g"; depends=[assertive_base assertive_properties assertive_types]; }; assertive_data = derive2 { name="assertive.data"; version="0.0-1"; sha256="0pjw7rf76d99awd8i4krmhbyks39lx89c9pb4j49nmz3w6x3z233"; depends=[assertive_base assertive_strings]; }; - assertive_data_uk = derive2 { name="assertive.data.uk"; version="0.0-1"; sha256="0z2hpvfl34zzy9sncmihcj1ir5nnm9d05j7ip7j83by2pfwsjdhf"; depends=[assertive_base assertive_strings]; }; - assertive_data_us = derive2 { name="assertive.data.us"; version="0.0-1"; sha256="0nfwfkaczbmxaj4bpyibcvsypigkn5j2syn2wb4d2grm7virk9bk"; depends=[assertive_base assertive_strings]; }; + assertive_data_uk = derive2 { name="assertive.data.uk"; version="0.0-2"; sha256="1fzjvhwp7mwkqqix29khvs6zcrc82n6j4czvzzb473vyjyvdlj5b"; depends=[assertive_base assertive_strings]; }; + assertive_data_us = derive2 { name="assertive.data.us"; version="0.0-2"; sha256="1bgspn0sccmp9z7s7djvdvprgxlyc5vrxznp4zfjb79kwvgn83hq"; depends=[assertive_base assertive_strings]; }; assertive_datetimes = derive2 { name="assertive.datetimes"; version="0.0-2"; sha256="00a98fx8p3pr3ckayh8wmxmm4rz01s67wah9697m92yci6pv3m78"; depends=[assertive_base assertive_types]; }; assertive_files = derive2 { name="assertive.files"; version="0.0-2"; sha256="02pfz8j5vwcj5kl6zca46894li7lxwnlrr29j922f14ay6kdssmy"; depends=[assertive_base assertive_numbers]; }; assertive_matrices = derive2 { name="assertive.matrices"; version="0.0-1"; sha256="1vk0i860r87rc5x0navai8xx9ixqyp96waxlk6j5p8y8hrpiyyif"; depends=[assertive_base]; }; - assertive_models = derive2 { name="assertive.models"; version="0.0-1"; sha256="1pkyssavld57njmv545bfa3a7dmyrgpsvr9vdhqmrmcpc55w89cj"; depends=[assertive_base]; }; + assertive_models = derive2 { name="assertive.models"; version="0.0-2"; sha256="0bn4j4v5qvb2d672cgri61p8d9v258pmz35y3lvm6b9mdxwdi9mr"; depends=[assertive_base]; }; assertive_numbers = derive2 { name="assertive.numbers"; version="0.0-2"; sha256="0jc3ss64j4m7bjydhagwwmka5n7c72vpw4kfcch0m5jvkq5qrqds"; depends=[assertive_base]; }; assertive_properties = derive2 { name="assertive.properties"; version="0.0-4"; sha256="0sqs54acs9qk9kvm32rxzfbzxz1l8mjahpfnw7r30z2brgz661jw"; depends=[assertive_base]; }; assertive_reflection = derive2 { name="assertive.reflection"; version="0.0-4"; sha256="19zmsbn00crfqm0kwd9ys5gv87xs3gi6wmlikrz9xiwzm7hp4dhj"; depends=[assertive_base]; }; @@ -4406,7 +4584,7 @@ in with self; { assist = derive2 { name="assist"; version="3.1.3"; sha256="0ngnn75iid5r014fcly29zhcfpqkqq24znncc3jdanbhdmfyybyz"; depends=[lattice nlme]; }; assocInd = derive2 { name="assocInd"; version="1.0.1"; sha256="16yzgvlqbapjhvzm5nw8vfrhh8mp9llnhck4bpgmszyrh93z1ha5"; depends=[]; }; assortnet = derive2 { name="assortnet"; version="0.12"; sha256="1vyzrb8vsi9pcdn6jd83k77bg0q2a3dwdvlnmxnshqiif2pakb8m"; depends=[]; }; - aster = derive2 { name="aster"; version="0.9.1.1"; sha256="12zn3wcx0n37fbnwwcz517libsgkbfphwbr4m68zba4craqhh5mi"; depends=[trust]; }; + aster = derive2 { name="aster"; version="1.0-2"; sha256="1yxa8b19g1acvn7mcj6l53x0cvb66dmjwrpmxb2y6k8da95hc9lp"; depends=[trust]; }; aster2 = derive2 { name="aster2"; version="0.3"; sha256="17d200sg0vn1fj6lb480dhszm70q6ipjldilb3x0jp72hiczakk9"; depends=[Matrix]; }; astro = derive2 { name="astro"; version="1.2"; sha256="1c7zrycgj2n8gz50m94ys1dspilds91s1b2pwaq6df1va17pznby"; depends=[MASS plotrix]; }; astroFns = derive2 { name="astroFns"; version="4.1-0"; sha256="0g5q0y067xf1ah91b4lg8mr9imj0d6lgig7gbj3b69fn335k363g"; depends=[]; }; @@ -4416,53 +4594,60 @@ in with self; { astsa = derive2 { name="astsa"; version="1.8"; sha256="023nk6chyy79scjzhv42px5cpym7rnm1c55ylcslyjdmlr5i6afk"; depends=[]; }; asus = derive2 { name="asus"; version="1.0.0"; sha256="16hp8xajb631a5amm1cvhzq8z4cwh1vjiavv3n11fzpxyskhmfrb"; depends=[rwt wavethresh]; }; asymLD = derive2 { name="asymLD"; version="0.1"; sha256="1q05pxwn6arpalspgf2m0cym4ivnwyv94i58k9kaihd37kvm5lgc"; depends=[]; }; - asymmetry = derive2 { name="asymmetry"; version="1.2.5"; sha256="0wsmarmij4crhv5wr4mqibsf787cy7fmmp4xrclsb3gm3g1xwvzz"; depends=[gplots rJava smacof]; }; + asymmetry = derive2 { name="asymmetry"; version="2.0"; sha256="02l9sg4f7i0mxzh4p7r930fswy4b04dv0icm7f2h1rldsnswh2sk"; depends=[gplots smacof]; }; asympTest = derive2 { name="asympTest"; version="0.1.4"; sha256="02l07psiy1888zx86j2r1l5lznz47wdmzbh39pd2nbj8r9i80szr"; depends=[]; }; asypow = derive2 { name="asypow"; version="2015.6.25"; sha256="0il38djkmw5ka7czpalmhq6yycx7flpdpgbd7p5nx52rsjdv49mj"; depends=[]; }; + atable = derive2 { name="atable"; version="0.1.0"; sha256="0q3vy42a09sayb69f5fihfrkrsp3cz4380hb9f35ggkyi9v2d7nk"; depends=[DescTools doBy effsize Hmisc plyr reshape2 settings]; }; atlantistools = derive2 { name="atlantistools"; version="0.4.3"; sha256="06rb0c4ralx55mdlqwpjzim0inxif4cdi9732v4h1ll8jhlm5v7d"; depends=[circlize dplyr ggplot2 gridExtra lazyeval magrittr proj4 purrr RColorBrewer RNetCDF rvest scales stringr tibble tidyr xml2]; }; - atlas = derive2 { name="atlas"; version="0.6.0"; sha256="0phpninwqqibafq88s3kwlv84506l2jxaz0hvcwd5hknvydcf6ib"; depends=[httr testthat]; }; + atlas = derive2 { name="atlas"; version="1.0.0"; sha256="02wm22j40llmdi6z3rzgbc5fpkzmjfq0xar33bypvj1dx1zxygnd"; depends=[httr testthat]; }; atmcmc = derive2 { name="atmcmc"; version="1.0"; sha256="05k69b5wlysz3kh0yiqvshgvr0nyz34zkvn6bjs30cwz7s9j21pn"; depends=[]; }; + atmopt = derive2 { name="atmopt"; version="0.1.0"; sha256="1h79ngq1236gz4w29fs3nj46a3m1x8a28z3xnhc6wn3a46cf8zzi"; depends=[DoE_base gtools hierNet]; }; atsd = derive2 { name="atsd"; version="1.2.0"; sha256="0jan8r5f2r3l2xpdf9rrv4smkr2l645rfdgdfjb1xa54jd3pqvqs"; depends=[httr RCurl]; }; attempt = derive2 { name="attempt"; version="0.2.1"; sha256="0366sq1mf3d0amf6yfa42gw1gwwr9rbbqnqvr8hai1bfl672zkcp"; depends=[rlang]; }; attrCUSUM = derive2 { name="attrCUSUM"; version="0.1.0"; sha256="113y40v9hyvnvvzvyqg81n0n1h84pj4zph5q8p0vc0384hw00544"; depends=[Rcpp RcppArmadillo]; }; attribrisk = derive2 { name="attribrisk"; version="0.1"; sha256="1zqx53mxz2hh9jyanf3jkadgpj44jbqrk4p13fas91zvhpw9pn5s"; depends=[boot survival]; }; - atus = derive2 { name="atus"; version="0.1"; sha256="15arijdfyci43k0a32zc8qmm73fmzrr3ghhxw0kgipdr3w5xcmz3"; depends=[]; }; + atus = derive2 { name="atus"; version="0.2"; sha256="1i67rx8p5v4shgbfcym4lbnlw55xx7w2fdzhgsgjjyfpwbpm7h4h"; depends=[]; }; auRoc = derive2 { name="auRoc"; version="0.1-0"; sha256="1ijk127p6g5mzc7b4b9lnjnfzvklz3g8w6bckrdahlw7djd9mgz1"; depends=[coda MBESS ProbYX rjags]; }; aucm = derive2 { name="aucm"; version="2018.1-24"; sha256="0x10dawlwxqywjl7mxc2gpp2r4wnd7pb6n80xlrb9yywm7zbb6x2"; depends=[kyotil]; }; auctestr = derive2 { name="auctestr"; version="1.0.0"; sha256="15b1x0c9yhl91gir7jmivp8vxzc8q7wvb0mgam9454avc6l29x4y"; depends=[dplyr tidyr]; }; audio = derive2 { name="audio"; version="0.1-5.1"; sha256="1imh2l43n1cvwzzby598qn59rsm5262snril6b98hyih7mw7fyad"; depends=[]; }; audiolyzR = derive2 { name="audiolyzR"; version="0.4-9"; sha256="09jsrjy15vcn6da0kgk06ghayyrf3s853gqv8qdawg745ky2hbgi"; depends=[hexbin plotrix RJSONIO]; }; audit = derive2 { name="audit"; version="0.1-1"; sha256="0hrcdcwda5c0snskrychiyfjcbnymkcl2x43bapb6inw9y8989qv"; depends=[]; }; - auditor = derive2 { name="auditor"; version="0.2.1"; sha256="0kpadjzfnahrbryn2zh0zxb93wivlbnznrgad3025mf1qabm3xnr"; depends=[car factoextra fdrtool GGally ggplot2 ggrepel hnp plotROC ROCR tseries]; }; - augSIMEX = derive2 { name="augSIMEX"; version="2.0"; sha256="0j0izfk1hdzzn1s7gd64q56x8ws8nvpzh7a8d13gzwxi9dhvkzvf"; depends=[MASS Rcpp rootSolve]; }; - auk = derive2 { name="auk"; version="0.2.1"; sha256="18vqvjksnllbkwfskiv8cv0dbw92nzkxwb0rj14sxxw8y55hybyy"; depends=[assertthat countrycode dplyr rlang stringi stringr tidyr]; }; + auditor = derive2 { name="auditor"; version="0.3.1"; sha256="1ndd5a5264b91qaw0qj9rwjvhn9lgw7y5dirjqlzkib6q9mcyanq"; depends=[car factoextra fdrtool GGally ggplot2 ggrepel gridExtra hnp plotROC ROCR tseries]; }; + augSIMEX = derive2 { name="augSIMEX"; version="3.0"; sha256="0fjs77v6hrrzw683v6bmgiz787jfcn84nfjlkfp3vad8v2fqa84c"; depends=[Formula MASS Rcpp rootSolve]; }; + augmentedRCBD = derive2 { name="augmentedRCBD"; version="0.1.0"; sha256="0kxhrz6s2njfj9b20mqmlgs7hy2227vrj00048cf8447l3y2a9lj"; depends=[dplyr emmeans flextable ggplot2 moments multcomp multcompView officer Rdpack reshape2 stringi]; }; + auk = derive2 { name="auk"; version="0.3.0"; sha256="0sxc18w377f86f096g06xw8a8iwfpzxc5xwn4337wycns3xwd8r4"; depends=[assertthat countrycode dplyr httr rlang stringi stringr tidyr]; }; aurelius = derive2 { name="aurelius"; version="0.8.4"; sha256="00bpf9sggvnajpmg3zsdgfjinkb6wbrcf1ris7qfhh1rp5rz4m4m"; depends=[gbm glmnet jsonlite]; }; auto_pca = derive2 { name="auto.pca"; version="0.3"; sha256="01m2ldpcxzj7fhgmr9wp4ha3gqdyh7l5bkrnw83smcbq5229hsyy"; depends=[plyr psych]; }; autoBagging = derive2 { name="autoBagging"; version="0.1.0"; sha256="01k44rgkpbbr3m2x360aq0fz2qi7nz036g5dsh2y3jy94rmddbyy"; depends=[abind caret cluster CORElearn e1071 entropy infotheo lsr MASS minerva party rpart xgboost]; }; autoFRK = derive2 { name="autoFRK"; version="1.0.0"; sha256="10vmgcpj2n5w9g4bjq2g3bz3n3x9b6h35w4qfr13v2sdzp3gz5da"; depends=[fields filehash filehashSQLite filematrix FNN LatticeKrig MASS Rcpp RcppEigen RcppParallel RSpectra spam]; }; + autocogs = derive2 { name="autocogs"; version="0.1.1"; sha256="0p5z4gnairar1g7fpf3cm7iy5kgx66k8zhkqxx1hjdhjqjqp4w0g"; depends=[broom checkmate diptest dplyr ggplot2 hexbin MASS mclust moments progress tibble]; }; autoencoder = derive2 { name="autoencoder"; version="1.1"; sha256="0ly1aanayk28nx6yqfhl7d0zm4vg6rfjikf5ibn8zhmkrfyflj1y"; depends=[]; }; autoimage = derive2 { name="autoimage"; version="2.0"; sha256="102f7wkrglsvdrsmyy79v0w7za5b79sn59czxzhriwrp4mrpdl47"; depends=[fields ggplot2 mapproj maps MBA viridisLite]; }; automagic = derive2 { name="automagic"; version="0.3"; sha256="0yzv0ianfq217jvz7rba86bcmxh09p513khvq6jk5k7isblvn0qd"; depends=[devtools dplyr formatR githubinstall knitr magrittr pacman purrr remotes yaml]; }; automap = derive2 { name="automap"; version="1.0-14"; sha256="1190kbmp0x80x0hyifdbblb4ijq79kvrfn9rkp5k6diig4v30n0w"; depends=[gstat lattice reshape sp]; }; + automl = derive2 { name="automl"; version="1.0.6"; sha256="0g7yki465syazji93z0jx39gg99dynhbm1b18blg493grphk0r7h"; depends=[]; }; automultinomial = derive2 { name="automultinomial"; version="1.0.0"; sha256="15cxnqaai2dln6jvk7lpfqvlpv5237zn18axp459p5zxcgg0lw88"; depends=[Hmisc igraph MASS Matrix]; }; autoplotly = derive2 { name="autoplotly"; version="0.1.2"; sha256="0ajzzj9w9f0v9n37liml63hq5xwkqq53lw85p0a2h99n4lg2hdg8"; depends=[ggfortify ggplot2 plotly]; }; autopls = derive2 { name="autopls"; version="1.3"; sha256="1qf5gk1vsz1p5670w7bgzh3b15wvrx1gy6ih4sivw0vj8bcjxbw9"; depends=[pls]; }; autoshiny = derive2 { name="autoshiny"; version="0.0.2"; sha256="0s06ynnirgsh19x8qq4020piirkhvjqpvz372syygvlal062y6cn"; depends=[shiny]; }; - autothresholdr = derive2 { name="autothresholdr"; version="1.2.0"; sha256="09wpyirsqw0s4b5221ksr0v0srrq24c6ca8kr5m4hr4ps728np0p"; depends=[checkmate filesstrings ijtiff magrittr Rcpp]; }; + autothresholdr = derive2 { name="autothresholdr"; version="1.2.1"; sha256="0jbqadhpmd3fq8i7ncwv98s12wcsrvvgk0dw2qgpg9f2d2k2gnb1"; depends=[checkmate filesstrings ijtiff lattice magrittr Rcpp]; }; autovarCore = derive2 { name="autovarCore"; version="1.0-4"; sha256="0i5fvx0z2kri0c855q40hd596kfjhmwpp2zw7d7k0xvk2xbcgbiv"; depends=[Amelia jsonlite Rcpp urca vars]; }; - available = derive2 { name="available"; version="1.0.0"; sha256="0w4i0ajw0p71k717v8hg9d8az08m8yl97w5lly87kli36p7mv30h"; depends=[cli clisymbols crayon desc glue jsonlite memoise purrr SnowballC stringdist tibble tidytext udapi yesno]; }; + av = derive2 { name="av"; version="0.2"; sha256="0vw6136sh1rgsah10xrcrgrpb6rpf5l8vixs950yq51syxc1y2qc"; depends=[]; }; + available = derive2 { name="available"; version="1.0.1"; sha256="0bijr3prl1bqkc34yn6g39gh9ig4xxynyglmw7di2l5ivp62rskl"; depends=[cli clisymbols crayon desc glue jsonlite memoise SnowballC stringdist tibble tidytext udapi yesno]; }; averisk = derive2 { name="averisk"; version="1.0.3"; sha256="02j27d4jxgy2bk5sgxp1xdfyqr321civs99qj0g8cp34gwqk0j3m"; depends=[MASS]; }; - aws = derive2 { name="aws"; version="1.9-6"; sha256="0mfq44pji0p6d7s1wbwi0f97lsh3f33wnj8fiyimpg9fv8lr4inz"; depends=[awsMethods gsl]; }; + aws = derive2 { name="aws"; version="2.2-0"; sha256="0kf79jnr3zn02b3bsq68mhhgxm2j10l6z14idvcbh3xiyyfaig5b"; depends=[awsMethods gsl]; }; aws_alexa = derive2 { name="aws.alexa"; version="0.1.6"; sha256="0c2yl023g2m4kqhhv4nbysjmp103aj3pk17dwyb9nrkpj9qm8zsh"; depends=[aws_signature dplyr httr xml2]; }; aws_cloudtrail = derive2 { name="aws.cloudtrail"; version="0.1.5"; sha256="0p7qj9ivs14ska11a9qni4n0f8d05c1p126zvlxj9038c9p0y1wx"; depends=[aws_s3 aws_signature httr jsonlite]; }; aws_comprehend = derive2 { name="aws.comprehend"; version="0.1.2"; sha256="0480ggfdmcv2pkjzmwh40h4nd87qswrpwr6h3j959f9y8zmzfd7n"; depends=[aws_signature httr jsonlite]; }; - aws_ec2metadata = derive2 { name="aws.ec2metadata"; version="0.1.4"; sha256="08l1gnqn2l6f6rkh21v1my2jp5bbzwnq38swymwl94jbnvnlrasw"; depends=[curl jsonlite]; }; + aws_ec2metadata = derive2 { name="aws.ec2metadata"; version="0.1.5"; sha256="077vp2djy2y37vkhvadbbaizfkx4qm86fm336idvrv36q8lcrl1v"; depends=[curl jsonlite]; }; aws_iam = derive2 { name="aws.iam"; version="0.1.7"; sha256="0hag8j5g8rqg39x4f6d8vwwzhz98cx7549xixfl9cxiff7x9sz2c"; depends=[aws_signature httr jsonlite xml2]; }; + aws_kms = derive2 { name="aws.kms"; version="0.1.2"; sha256="1bg1csdlwgaw928jschq1pxhg1ibrzy2q85vvc2zhlfd6c6xif3d"; depends=[aws_signature base64enc httr jsonlite]; }; aws_lambda = derive2 { name="aws.lambda"; version="0.1.6"; sha256="16vis596clxn6h9j1k66224ikacsg0f9xrzqi5987nqlzrwskjgk"; depends=[aws_signature base64enc httr jsonlite]; }; aws_polly = derive2 { name="aws.polly"; version="0.1.2"; sha256="0ij0rbng8q7xfa08p4x1l1lcmskmz3fy2pvln28zxqbs6jbc22rm"; depends=[aws_signature httr jsonlite tuneR]; }; aws_s3 = derive2 { name="aws.s3"; version="0.3.12"; sha256="1yfi9ihrd0hmzxklc86mf5hcwgzsb5c4p1i402vgpg5mfvcvp3rl"; depends=[aws_signature base64enc digest httr xml2]; }; aws_ses = derive2 { name="aws.ses"; version="0.1.4"; sha256="13hf4iqhnpkm9rnr7nzwky663vplnkjrgk90zix91cn2fvaspjgp"; depends=[aws_signature httr jsonlite]; }; - aws_signature = derive2 { name="aws.signature"; version="0.4.1"; sha256="094d0jwg6433bdfkvs3r9mjvg61k78ff4ck0zhgyaz4aivlchm9j"; depends=[base64enc digest]; }; + aws_signature = derive2 { name="aws.signature"; version="0.4.4"; sha256="18w4m7ald8ira59mrvhppzs0vfafi8xwqn7xrwl3hhsj855nzmyc"; depends=[base64enc digest]; }; aws_sns = derive2 { name="aws.sns"; version="0.1.7"; sha256="0i8nn5jnykhsjwn4nsqdqbagankjc09zs8and54rkirdigzdny8v"; depends=[aws_signature httr jsonlite xml2]; }; aws_sqs = derive2 { name="aws.sqs"; version="0.1.10"; sha256="09sh3injb4kfrq5al7hmbnqdn5v5hnjkqqsz86vpi4154435ymdg"; depends=[aws_signature httr jsonlite xml2]; }; aws_transcribe = derive2 { name="aws.transcribe"; version="0.1.2"; sha256="12qz7j535aqxcvcawj4iqycbcmlba32sdl8qj2cw6rq5rgm55xaz"; depends=[aws_signature httr jsonlite]; }; @@ -4473,10 +4658,12 @@ in with self; { b6e6rl = derive2 { name="b6e6rl"; version="1.1"; sha256="17scdskn677vaxx1h2jypqaffvjgczryplg17nr3wigi1x0cxg7a"; depends=[]; }; bPeaks = derive2 { name="bPeaks"; version="1.2"; sha256="1z6jghcmw0lwv17ms7gdp5zzimaawq3ahbwkxa4062g373592smd"; depends=[]; }; bReeze = derive2 { name="bReeze"; version="0.4-2"; sha256="04zapsxb4lsi85m9qgrsm49yasf0b8wk0djdpa7xks4hjvmskfhq"; depends=[]; }; - bWGR = derive2 { name="bWGR"; version="1.5.3"; sha256="0kgl29kmpdbzjhbwv8kdy2lygza06fb90hqr7vwbgyl4fw049k9p"; depends=[Rcpp]; }; + bWGR = derive2 { name="bWGR"; version="1.5.6"; sha256="1c0f3y30gynvlf70fakhspp91q5fdq9b4hii18i1qq89162qgnd8"; depends=[Rcpp]; }; + baRcodeR = derive2 { name="baRcodeR"; version="0.1.0"; sha256="0csg696zkbnfryzaayq7vf7zvsfixxqm4mc12f553igza9yyg7vk"; depends=[DT ggplot2 miniUI qrcode shiny]; }; babar = derive2 { name="babar"; version="1.0"; sha256="13j5klrcnd4dwrgdbxlvwcj56l9mzi4j9ga6jj5i04pgdc6vsfx5"; depends=[]; }; babel = derive2 { name="babel"; version="0.3-0"; sha256="1iwvx69051yhlxbcl6bypvc3mcih0q8bf3i29r3i79356hp12xqa"; depends=[edgeR]; }; babynames = derive2 { name="babynames"; version="0.3.0"; sha256="018wyajdkpvcywcvkna57m5sqnsh7i9zq2hqlyb8q93mgyb3ddzm"; depends=[tibble]; }; + bacistool = derive2 { name="bacistool"; version="0.9.8"; sha256="1yq7d2657l6iyy5v094c9rwphbpyhnijhwvacwhb07k6c6h069wh"; depends=[rjags]; }; backShift = derive2 { name="backShift"; version="0.1.4.2"; sha256="1nj7mcdpzfzq68qg86rrys752gzw69n99yyb0jzg6r8qrgpcxj49"; depends=[clue ggplot2 igraph MASS matrixcalc mvnmle reshape2]; }; backblazer = derive2 { name="backblazer"; version="0.1.0"; sha256="020kdydksm0brnxsa00blf5sylxd4hz49wmngk1x1fx43kdlyc41"; depends=[httr jsonlite openssl]; }; backpipe = derive2 { name="backpipe"; version="0.2.3"; sha256="12k2cv9x8h0b002m9c8g4vj5a7chp4b8jqz377ia0diqw89dydpm"; depends=[]; }; @@ -4488,17 +4675,20 @@ in with self; { bagRboostR = derive2 { name="bagRboostR"; version="0.0.2"; sha256="1k9w98p3ad3myzyqhcrc4rsn7196qvhnmk5ddx3fpd1rdvy2dnby"; depends=[randomForest]; }; bairt = derive2 { name="bairt"; version="0.1.2"; sha256="17nc0lp0bzwshik33v0gq5d6nd2gvm4799b7rfiq089zhnzv90kj"; depends=[coda mvtnorm shiny shinyjs]; }; baitmet = derive2 { name="baitmet"; version="1.0.1"; sha256="02ydakqr8v41hdnhcsgigwnic8d48qswryg1srb5w1fqdmdglnkl"; depends=[erah HiClimR Rcpp signal XML]; }; - ballr = derive2 { name="ballr"; version="0.2.0"; sha256="1f5fclmgp0pznahr3ix7xiixqah01jmh2g6fvrqyi6xcin8ynwqc"; depends=[dplyr janitor lubridate magrittr rlang rvest xml2]; }; - bamboo = derive2 { name="bamboo"; version="0.9.22"; sha256="1fajc4880wkpxjdgh41r2fq95dllpk1irbrkvrrwvb0pf3zbmjsl"; depends=[rscala]; }; - bamdit = derive2 { name="bamdit"; version="3.1.0"; sha256="148ikj7mly8m6kxs2n4gidi7kb70i3x2vbf9xsllrf0cgvrjccps"; depends=[ggExtra ggplot2 gridExtra MASS R2jags rjags]; }; - bamlss = derive2 { name="bamlss"; version="1.0-0"; sha256="0wa54f5zyjyplys29cqhrasc6qa8p5znfal2ihp0qhhs46wzsk4y"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm sp survival]; }; + balance = derive2 { name="balance"; version="0.1.6"; sha256="12m4kqmdix9x42lgi6pm75hw3sphj7hn7shkfa9v53074dgajyjh"; depends=[ggplot2]; }; + ballr = derive2 { name="ballr"; version="0.2.2"; sha256="0iragzlw3fp02nj9l9smzxykgkd9vsq4g1lpkj88bs3wkynj112j"; depends=[dplyr janitor lubridate magrittr rlang rvest xml2]; }; + bamboo = derive2 { name="bamboo"; version="0.9.23"; sha256="02mvj78kkcpa0bszf8jd0s7nvjwhgbxhgazqssw0fjifs2iqr2zn"; depends=[rscala]; }; + bamdit = derive2 { name="bamdit"; version="3.2.1"; sha256="18l9kd3a0d4y6z38k9nm18j32g6dxmwylv8cv1wp3fzffv51lm1s"; depends=[ggExtra ggplot2 gridExtra MASS R2jags rjags]; }; + bamlss = derive2 { name="bamlss"; version="1.0-1"; sha256="1nxy8a075dhdwz9jhyicqj1naz95w0mns64c6j59gpzwp03nvml4"; depends=[coda colorspace Formula Matrix MBA mgcv mvtnorm sp survival]; }; banR = derive2 { name="banR"; version="0.2.0"; sha256="0m71m99f8f4wckylry6z16gw6r2cc4wxbd9287ns00jr6s13x6c8"; depends=[dplyr httr magrittr purrr readr rlang stringr tibble]; }; bandit = derive2 { name="bandit"; version="0.5.0"; sha256="03mv4vbn9g4mqikd9map33gmw2fl9xvb62p7gpxs1240w5r4w3fp"; depends=[boot gam]; }; bang = derive2 { name="bang"; version="1.0.0"; sha256="16wy2imrdvhpdzi6ix9k69afqdyc44d1xr655yd3q1cl12x1nr04"; depends=[bayesplot rust]; }; bannerCommenter = derive2 { name="bannerCommenter"; version="0.1.0"; sha256="0ycx771g9a73w0sx8zzix8kswwbjagzhbyvaq7l5r8a9ayfli8ic"; depends=[]; }; + banter = derive2 { name="banter"; version="0.9.3"; sha256="1ziys0zy66477ynr8rp2kv7w82n6226whn47aa06kkb4nhcqfk2c"; depends=[dplyr ggplot2 gridExtra magrittr plyr randomForest ranger rfPermute rlang tibble tidyr]; }; banxicoR = derive2 { name="banxicoR"; version="0.9.0"; sha256="0vchm2hnqm45fhn8k38rcam4vkazmifcl40390s2r04bgvqr0pnl"; depends=[rvest stringr xml2]; }; bapred = derive2 { name="bapred"; version="1.0"; sha256="08kvc4cc984jv08ikwbja8zxidrcdiwi5w88hlqakbm8yc6hzssa"; depends=[affy affyPLM Biobase FNN fuzzyRankTests glmnet lme4 MASS mnormt sva]; }; barcode = derive2 { name="barcode"; version="1.1"; sha256="14zh714cwgq80zspvhw88cs5b82gvz4b6yfbshj9b7x0y2961nxd"; depends=[lattice]; }; + barsurf = derive2 { name="barsurf"; version="0.1.0"; sha256="0lz87lzs4fs9rbc0p8a92li5cj1cd8va5rgp9s0n96rwmzmdkz63"; depends=[]; }; bartMachine = derive2 { name="bartMachine"; version="1.2.4.2"; sha256="100zcpbndbps01qnybrgmsfnh37j93661l4v7zcin0i56cvgg998"; depends=[bartMachineJARs car missForest randomForest rJava]; }; bartMachineJARs = derive2 { name="bartMachineJARs"; version="1.1"; sha256="1wpfzrb6mrx3xmxy4rgnwygmpqq2l4ki2xqr4m51g1bl9nwirhzj"; depends=[rJava]; }; basad = derive2 { name="basad"; version="0.2.0"; sha256="1qc2amkrjrgdqys275p82lmbpjszm5rzjdpri7hqc9d8b8q1vc9q"; depends=[Rcpp RcppEigen rmutil]; }; @@ -4507,75 +4697,82 @@ in with self; { base64enc = derive2 { name="base64enc"; version="0.1-3"; sha256="13b89fhg1nx7zds82a0biz847ixphg9byf5zl2cw9kab6s56v1bd"; depends=[]; }; base64url = derive2 { name="base64url"; version="1.4"; sha256="0n1c2b68vza1dh7sk38v6biiwm72c4jpl79kpdg1bsb0hq9qy18x"; depends=[backports]; }; baseballDBR = derive2 { name="baseballDBR"; version="0.1.2"; sha256="0w54g1avcqamc12lmvjchlqbqck9jfjccm441k03nsql460mpydq"; depends=[dplyr magrittr rvest xml2]; }; - basefun = derive2 { name="basefun"; version="1.0-1"; sha256="0qiszm71alh7p3inhiv9prdl4f5l45ny8plz2fm7l5h51z5xj54r"; depends=[Matrix orthopolynom polynom variables]; }; + basefun = derive2 { name="basefun"; version="1.0-2"; sha256="16j7lzpyiw9iw3zb1cw2l685303dljv93kdxgfdzajzgcmmmpr6m"; depends=[Matrix orthopolynom polynom variables]; }; baseline = derive2 { name="baseline"; version="1.2-1"; sha256="1vk0vf8p080ainhv09fjwfspqckr0123qlzb9dadqk2601bsivgy"; depends=[SparseM]; }; - basicTrendline = derive2 { name="basicTrendline"; version="1.0.1"; sha256="0rsmlp70ylpkqv437jcy3skwbfkj4xwkpjb2q79b9n8kw2ir0716"; depends=[]; }; + basicMCMCplots = derive2 { name="basicMCMCplots"; version="0.1.0"; sha256="033m0z7xj5lvzfw7g54ls99ii2wj5hwk5lhids124ax8ckqzspii"; depends=[]; }; + basicTrendline = derive2 { name="basicTrendline"; version="2.0.3"; sha256="10rq9hriyn50b28ikvl0vsvchbkrc0pjzxamq4ix1xd04n4drkl9"; depends=[investr scales]; }; basicspace = derive2 { name="basicspace"; version="0.20"; sha256="0nyljk8ydasirgv7ijxplyhk10s8m9k3rw5qmgf0z81dm7p257wc"; depends=[]; }; basictabler = derive2 { name="basictabler"; version="0.1.0"; sha256="1m4cgghfh3aixsnwjlbaj3prnnqxhij60bakz9vdr5dvnqg92an9"; depends=[dplyr htmltools htmlwidgets jsonlite R6]; }; bastah = derive2 { name="bastah"; version="1.0.7"; sha256="08xdba16wj0inp0kq2sbcrdr6wj8bwlq7rqnfrzjrz03wxhc5bk0"; depends=[BigQuic foreach glmnet lars MASS Matrix scalreg]; }; batade = derive2 { name="batade"; version="0.1"; sha256="1lr0j20iydh15l6gbn471vzbwh29n58dlpv9bcx1mnsqqnsgpmal"; depends=[hwriter]; }; batch = derive2 { name="batch"; version="1.1-5"; sha256="0wdgfvk2i542cqg34ikvzwlix09f2jyjb32a0f4zh9vg9nrywswq"; depends=[]; }; batchmeans = derive2 { name="batchmeans"; version="1.0-3"; sha256="1qkdljngvlahk0pbrkarkjh2g4sxxwiva9f3m5y8gz8pjw9fpy9n"; depends=[]; }; - batchtools = derive2 { name="batchtools"; version="0.9.10"; sha256="0qgjag82z7s6s35lccpidkq5rivkz03gnmcggrgaa9vskv0w6q62"; depends=[backports base64url brew checkmate data_table digest fs progress R6 rappdirs stringi withr]; }; + batchtools = derive2 { name="batchtools"; version="0.9.11"; sha256="02mj21ypcjv5fs7ajf63p6bq0cyvihdl55hlpqx6kmsfjin1cr0v"; depends=[backports base64url brew checkmate data_table digest fs progress R6 rappdirs stringi withr]; }; batman = derive2 { name="batman"; version="0.1.0"; sha256="0ccgx506p4iri23k2ikb8jmh04dp08w66785bv52iy8kd359h43f"; depends=[Rcpp]; }; batteryreduction = derive2 { name="batteryreduction"; version="0.1.1"; sha256="0j838q7063bplkzd50kmnxji80cgysfsq7m1qifv8z7a2zsh8c8g"; depends=[pracma]; }; - bayesAB = derive2 { name="bayesAB"; version="1.1.0"; sha256="0g74n6jvpmb2sbmywcagb10rk8sd3pxzkw9s8s6qpg34q58v01a6"; depends=[ggplot2 Rcpp]; }; + bayesAB = derive2 { name="bayesAB"; version="1.1.1"; sha256="0kxrhxg43hzkcziyqpwy29iqs7i0qi3pn3jz0z1s8paf8drbgdf4"; depends=[ggplot2 Rcpp]; }; bayesCL = derive2 { name="bayesCL"; version="0.0.1"; sha256="1l278lxidn16nma2ny14wjajcqyzbr6j5xl2lj08cic26c7hvjbm"; depends=[]; }; - bayesDP = derive2 { name="bayesDP"; version="1.3.1"; sha256="175g75cpynccyzcbzca4h6xa2708985h8dhq34kvkpfhv35pc64d"; depends=[ggplot2 Rcpp RcppArmadillo survival]; }; + bayesDP = derive2 { name="bayesDP"; version="1.3.2"; sha256="1xv133v01mbfsy0w5acc9819m92dcxfdjg4a8p7kdfkycz4ilwnl"; depends=[ggplot2 Rcpp RcppArmadillo survival]; }; bayesDccGarch = derive2 { name="bayesDccGarch"; version="2.0"; sha256="1s2b8f43wi9ja966n2p2r4l4s79vk6xb8mqaxsagnw90g969p681"; depends=[coda numDeriv]; }; bayesDem = derive2 { name="bayesDem"; version="2.5-1"; sha256="1cxrqil1p692mbzkcj1fvsx335qyy6c1y43mq48s4shs1hhc69bn"; depends=[bayesLife bayesPop bayesTFR gWidgets gWidgetsRGtk2 RGtk2 wpp2015]; }; bayesGARCH = derive2 { name="bayesGARCH"; version="2.1.3"; sha256="1480mmzfshchfbfh3x420cq5qblfh59jkl21hkq2jvnwppksdn9w"; depends=[coda mvtnorm]; }; bayesGDS = derive2 { name="bayesGDS"; version="0.6.2"; sha256="0ash16hmassn76x3f59dfvp4plqp8vb17qzcwmag7vi3mi3y2ap6"; depends=[Matrix]; }; - bayesImageS = derive2 { name="bayesImageS"; version="0.5-2"; sha256="01gnjxrp68jxrygijk6v42dsiyfkxawvj4ilh0sajm05iknkn419"; depends=[Rcpp RcppArmadillo]; }; + bayesImageS = derive2 { name="bayesImageS"; version="0.5-3"; sha256="0whb3am92v95rhxnlpjl212jsy2r6pv35svj4lgl7p74300b25ra"; depends=[Rcpp RcppArmadillo]; }; bayesLife = derive2 { name="bayesLife"; version="3.2-0"; sha256="1a3x3y77542hgndvymhnyg6dys0s5rimkgprl8psflsgsrxnbmcv"; depends=[bayesTFR car coda hett wpp2017]; }; bayesLopod = derive2 { name="bayesLopod"; version="1.0.1"; sha256="0v9yy75mvr74jc0fz10qj1acwxjy0lbqkdqaj1hn88v294r9dw3q"; depends=[BH inline raster Rcpp RcppEigen rgeos rstan rstantools slam sp StanHeaders]; }; - bayesPop = derive2 { name="bayesPop"; version="6.2-4"; sha256="1z8s5lbvz642hxl10b4cv361izw82akq40dav3mknqqcgv1vlrk6"; depends=[abind bayesLife bayesTFR fields googleVis plyr reshape2 rworldmap wpp2012 wpp2017]; }; + bayesPop = derive2 { name="bayesPop"; version="7.0-0"; sha256="1ydr0hds09xa17117y9dvk2sym2jfk0yjip79dig9c2vsykns0cm"; depends=[abind bayesLife bayesTFR fields googleVis plyr reshape2 rworldmap wpp2012 wpp2017]; }; bayesQR = derive2 { name="bayesQR"; version="2.3"; sha256="1c6y7r9h9626ghp68pl5k1g0l95fwd6dp0jfznmhy53qza0ny8z4"; depends=[]; }; bayesSurv = derive2 { name="bayesSurv"; version="3.2"; sha256="1zp302pfi64nnqdiqldvfi1lm0wv2dplz5sfjp0ydl1qc16z0axp"; depends=[coda smoothSurv survival]; }; - bayesTFR = derive2 { name="bayesTFR"; version="6.1-2"; sha256="092sl8xk82kybpp0v06j0dxh4zal0d6j2na42ghl2ri36iy6wqvx"; depends=[coda MASS mvtnorm wpp2017]; }; + bayesTFR = derive2 { name="bayesTFR"; version="6.2-0"; sha256="0qgab56dk8pf2r6rl3h18lfh6xkdw9jn5va55iw20lc4a52miz64"; depends=[coda MASS mvtnorm wpp2017]; }; bayesammi = derive2 { name="bayesammi"; version="0.1.0"; sha256="1vfcmk47x71c5akj3ppxzb74293pikspknkkv08f8p15v0chk7fs"; depends=[dplyr ggplot2 lme4 magrittr MASS mvtnorm rlang rstiefel scales tibble tidyr tmvtnorm]; }; bayesbio = derive2 { name="bayesbio"; version="1.0.0"; sha256="08qa4lzkrcwin7n3kzfqfdlnlqahdmjl1lxpdh29n780cgyjfvs0"; depends=[]; }; bayesboot = derive2 { name="bayesboot"; version="0.2.2"; sha256="0976ryd0gbw3kpmxg2qxyp1m2swnrpa86vdhvqrqxp7fcrs8cs2z"; depends=[HDInterval plyr]; }; bayescount = derive2 { name="bayescount"; version="0.9.99-5"; sha256="0c2b54768wn72mk297va3k244256xlsis9cd6zn6q5n1l7ispj6j"; depends=[coda rjags runjags]; }; + bayesdfa = derive2 { name="bayesdfa"; version="0.1.0"; sha256="1ikladsmjw5y3hpjwmvn00wlg3fzgyzvwlrvkahdc5ni1mggh0fj"; depends=[BH dplyr ggplot2 loo Rcpp RcppEigen reshape2 rlang rstan StanHeaders]; }; bayesianETAS = derive2 { name="bayesianETAS"; version="1.0.3"; sha256="0nbif0b6lcik2kh948zg5ska5mvkdsfr0dg8ndnfpscm2mp7y1dg"; depends=[]; }; bayeslm = derive2 { name="bayeslm"; version="0.8.0"; sha256="1gvqkbz1wmqkxjwkdgj5pir5j1qy5dzjm4jv6mz3mplm16z5vzbl"; depends=[coda Rcpp RcppArmadillo RcppParallel]; }; bayesloglin = derive2 { name="bayesloglin"; version="1.0.1"; sha256="0j2ziahf6mwsz2gvb1azvdzlmszlpqgr5zqcqa68pxgq947sa2cs"; depends=[igraph]; }; bayeslongitudinal = derive2 { name="bayeslongitudinal"; version="0.1.0"; sha256="0g45ikpnbry1albb3asrzab5z3sy98yf74c64qn02d65xgafifwg"; depends=[LearnBayes MASS mvtnorm]; }; bayesm = derive2 { name="bayesm"; version="3.1-0.1"; sha256="04b4s8clxrmdyhnhd2arnsdi992422yam3z91w6dzrmngwxq4yaq"; depends=[Rcpp RcppArmadillo]; }; - bayesmeta = derive2 { name="bayesmeta"; version="2.2"; sha256="15pqa1plcnl8pbzs38cw22y3qq1v7f9vla4zy0154crvbrbp8kwf"; depends=[forestplot metafor]; }; + bayesmeta = derive2 { name="bayesmeta"; version="2.3"; sha256="12rljnlr7wv0q95ild7vrsbgkpg7zw1lmh6gx4kpip1ckax04360"; depends=[forestplot metafor]; }; bayesmix = derive2 { name="bayesmix"; version="0.7-4"; sha256="1qms1nnk2nq3gqr8zf2b9ri4wv8jrxv5i8s087k1rwdvya3k5r9a"; depends=[coda rjags]; }; - bayesplot = derive2 { name="bayesplot"; version="1.5.0"; sha256="1f0kgrgr87fp9576ssrygkp5n4186zq1rw5iwzhqr8s81is352li"; depends=[dplyr ggplot2 ggridges reshape2 rlang]; }; + bayesplot = derive2 { name="bayesplot"; version="1.6.0"; sha256="0in9cq2ybpa7njrwqx4l6nc8i01cjswsvzwlyiw465pi74aapr57"; depends=[dplyr ggplot2 ggridges reshape2 rlang]; }; bayespref = derive2 { name="bayespref"; version="1.0"; sha256="0gwlzs7qkgmf90np7xv85d27jjqggyhfj00vpya664a2znyjb3jm"; depends=[coda lattice MASS MCMCpack RColorBrewer]; }; bayess = derive2 { name="bayess"; version="1.4"; sha256="0axipk5hn2hw3g4dfh7y3xa0dxqmi8kqpbr77nl14y7ydpija6xm"; depends=[combinat gplots MASS mnormt]; }; - bayou = derive2 { name="bayou"; version="2.1"; sha256="0biziarmamdpapv2p2ylvxqa4mcdvdwbay545w51yb73538bgkb8"; depends=[ape assertthat coda denstrip fitdistrplus foreach geiger MASS Matrix mnormt phytools Rcpp RcppArmadillo]; }; + bayou = derive2 { name="bayou"; version="2.1.1"; sha256="17gvb2dmviwibnlqn6p3p9pcc3705xh9r8lrm90p0yg7nhm0cn02"; depends=[ape assertthat coda denstrip fitdistrplus foreach geiger MASS Matrix mnormt phytools Rcpp RcppArmadillo]; }; baystability = derive2 { name="baystability"; version="0.1.0"; sha256="1zv4bf5a4p21w2qpr6lcsgsxb0xv15v8p33031rsypmnbs9i80dp"; depends=[dplyr ggfortify ggplot2 lme4 magrittr MASS matrixStats reshape2 rlang rstiefel scales tibble tidyr tidyverse]; }; - bazar = derive2 { name="bazar"; version="1.0.6"; sha256="12b1x218x1yh9iadv8ciyncr841s0arvj4pbn74bryhcgbvmbwqm"; depends=[kimisc]; }; + baytrends = derive2 { name="baytrends"; version="1.0.7"; sha256="1l59w79n2l04n0i12ka1cvnnqsx9412b2fgsgp4pz5hsi5nswlp8"; depends=[dataRetrieval digest gdata lubridate memoise mgcv plyr survival XML zCompositions]; }; + bazar = derive2 { name="bazar"; version="1.0.10"; sha256="1in3096bxw7v80wxkjp6i9akyv18ihzc0kldl952i9s772dcgbfs"; depends=[kimisc]; }; bbefkr = derive2 { name="bbefkr"; version="4.2"; sha256="1wjx652w3p41sq71a2zdzmb7frjxm6xvcgrc2ark2spwb0lbjjw6"; depends=[]; }; bbemkr = derive2 { name="bbemkr"; version="2.0"; sha256="015c57s8mpimm82nddnh382wlkisxgdmc2hvp7k38pcnqxc5gb5q"; depends=[MASS]; }; bbmle = derive2 { name="bbmle"; version="1.0.20"; sha256="1xzij7swrrzl5ly8l3lw6awh486zcm00251dwqws1y23fbgyh3vc"; depends=[lattice MASS numDeriv]; }; bbo = derive2 { name="bbo"; version="0.2"; sha256="19xrbla3bb3csg3gjjrpkgyr379zfwyh293bcrcd6j8rnm6g4i01"; depends=[]; }; bbw = derive2 { name="bbw"; version="0.1.3"; sha256="1z3an561qh0rfi3jhh1ghsdbg8aimqmf4hpqri2jz39in3p0gwg4"; depends=[car]; }; bc3net = derive2 { name="bc3net"; version="1.0.4"; sha256="15dghd0v1s71h77iw8b49v5h7wcda5mb4540lfyibsdipbashv2h"; depends=[c3net igraph infotheo lattice Matrix]; }; - bcROCsurface = derive2 { name="bcROCsurface"; version="1.0-2"; sha256="0v1zjbgpalr5ag97s9rxcd2z0r7qpw8yhc4lw4p4i3xkw2paf5zh"; depends=[boot nnet Rcpp RcppArmadillo rgl]; }; + bcROCsurface = derive2 { name="bcROCsurface"; version="1.0-3"; sha256="1g9l4abnpp1iq5wy3rl2jv47ql9zh6s2qrhyj06x22358lpinjnl"; depends=[boot nnet Rcpp RcppArmadillo rgl]; }; bcRep = derive2 { name="bcRep"; version="1.3.6"; sha256="1fibx11ykkkjv4sgg6zc2a0g270384z2cf68hwghnld0wi002b5z"; depends=[ape doParallel foreach gplots ineq plotrix proxy stringdist vegan]; }; + bcaboot = derive2 { name="bcaboot"; version="0.2-1"; sha256="0wf1igkb0lidz4pvh3kfccs9858m1g9650wprrvrpwsdfrcd7rc9"; depends=[]; }; + bcf = derive2 { name="bcf"; version="1.2.1"; sha256="03l4wlqz69sqkffjrlznlam2sql9zfpa6x84y7x1z66zfy6f7n79"; depends=[Rcpp RcppArmadillo]; }; bcgam = derive2 { name="bcgam"; version="1.0"; sha256="1dg2fcjw8xal77irviiz260qpar2iqkjvi2k4qfm71jyq0ir0axk"; depends=[coda igraph nimble]; }; bclust = derive2 { name="bclust"; version="1.5"; sha256="01kx02azj26b6swly53zhf3sny6c6jglkxnzylsc0pvri89x7yj2"; depends=[]; }; bcmaps = derive2 { name="bcmaps"; version="0.17.1"; sha256="12hca67n7fqplis8g954hj588zl9kj8gmph86mxhcy151qpyh927"; depends=[httr rappdirs sf]; }; - bcp = derive2 { name="bcp"; version="4.0.2"; sha256="0ixpjhyyqaz7gc2ixpask062sxhsfg8d146mm244jkqgiagydg5l"; depends=[Rcpp RcppArmadillo]; }; + bcp = derive2 { name="bcp"; version="4.0.3"; sha256="0vhs89lb2wpanqsljclpvwbjmgdsc3jicws8bzqiqh8mbs3nzpxy"; depends=[Rcpp RcppArmadillo]; }; bcpa = derive2 { name="bcpa"; version="1.1"; sha256="0rwbd39szp0ar9nli2rswhjiwil31zgl7lnwm9phd0qjv8q0ppar"; depends=[plyr Rcpp]; }; bcpmeta = derive2 { name="bcpmeta"; version="1.0"; sha256="02fw1qz9cvr7pvmcng7qg7p04wxxpmvb2s8p78f52w4bf694iqhl"; depends=[mvtnorm]; }; bcrm = derive2 { name="bcrm"; version="0.4.7"; sha256="0s0xmmphrrsqnrsnnsqh9ska6afl4jyk0s0290w6askrlqdzjgil"; depends=[ggplot2 mvtnorm]; }; bcrypt = derive2 { name="bcrypt"; version="1.1"; sha256="1wwdin8x09y8n8zrwj1ylh5ikcz0v0la4wmrsvbdr61cg336wzx4"; depends=[openssl]; }; bcv = derive2 { name="bcv"; version="1.0.1"; sha256="0yqcfariw9sw0b8cpljcr7vf5rf0cwr1wbif23icchfaxk2m42gj"; depends=[]; }; + bdDwC = derive2 { name="bdDwC"; version="0.1.15"; sha256="0yraq8a0wgz12rzi2dx0gdcz5rx99qd2pzw972wjqyq3rs41pwx0"; depends=[shiny shinyBS shinydashboard shinyFiles shinyjs]; }; bda = derive2 { name="bda"; version="10.1.9"; sha256="06ycxqjpnsywakjkjxf1czhxsbdzbpwa11m69gad5538z066d24x"; depends=[]; }; bde = derive2 { name="bde"; version="1.0.1"; sha256="1f25gmjfl58x4pns89abfk85yq5aad3bgq9yqpv505g5gxk62d3v"; depends=[ggplot2 shiny]; }; bdlp = derive2 { name="bdlp"; version="0.9-1"; sha256="1ydb5hsaj1bfdz7hcdkc74qlk608kf0xrbpw247klkxrhsh9ba2p"; depends=[DBI GenOrd MASS MultiOrd rgl RSQLite stringdist]; }; bdots = derive2 { name="bdots"; version="0.1.19"; sha256="1cj6ly62d50z6713119hadl90cxf5x30wpnpx6mssmd49zds6nxb"; depends=[doParallel doRNG foreach Matrix mvtnorm nlme]; }; bdpopt = derive2 { name="bdpopt"; version="1.0-1"; sha256="1z7mdqklw3frsdzyhvx8s8wvblwm28fr1gca2yrivqjng0r47lx4"; depends=[coda rjags]; }; bdpv = derive2 { name="bdpv"; version="1.1"; sha256="0i6wdf27243ch8pn2chqriwxjg3g72wbvzlx52mz4ahw700xjc7n"; depends=[]; }; + bdribs = derive2 { name="bdribs"; version="1.0.4"; sha256="19qakmdw3l8vfxkr4p1ydkyfs4cmq37lqzw7l5zx5rdn6zlhqwh4"; depends=[rjags]; }; bdscale = derive2 { name="bdscale"; version="2.0.0"; sha256="1hkkfd69g2bg2y4hicjs6bnw9f0zw74jy0dpadchnzw17lffpms3"; depends=[ggplot2 scales]; }; bdsmatrix = derive2 { name="bdsmatrix"; version="1.3-3"; sha256="17ddvz4gnih7rx0lr1gzk280xyh6x796cf2x794dvplpiiq83skh"; depends=[]; }; - bdvis = derive2 { name="bdvis"; version="0.2.20"; sha256="1iif70s17d9nh6bylm9s0ky70qx441n56h953gz4hxp7rb5dly31"; depends=[chron ggplot2 lattice leafletR maps plotrix plyr sqldf taxize treemap]; }; + bdvis = derive2 { name="bdvis"; version="0.2.22"; sha256="1kfkn3ak1aqqj61ryfxmq8vvmi4z4znha03ga1ncsrnpb6g1kfvk"; depends=[chron ggplot2 lattice leafletR maps plotrix plyr rgdal sqldf taxize treemap]; }; bdynsys = derive2 { name="bdynsys"; version="1.3"; sha256="07gfyp0qwq9y1cnh7lhcz7q0b1s51cjwlbpll50l2cza2dszmf29"; depends=[caTools deSolve Formula Hmisc MASS matrixStats plm pracma]; }; bea_R = derive2 { name="bea.R"; version="1.0.6"; sha256="15pdbwz7av8862bl144n998qk0w9rqwip9m2brdm5hj7id5xdlif"; depends=[chron colorspace data_table DT ggplot2 googleVis gtable htmltools htmlwidgets httpuv httr jsonlite magrittr munsell plyr Rcpp scales shiny shinydashboard stringi stringr xtable yaml]; }; beadarrayFilter = derive2 { name="beadarrayFilter"; version="1.1.0"; sha256="044dq5irc00v2f2gjz0vb69w7q7b84lppc55ganabdv4f0dxdblc"; depends=[beadarray RColorBrewer]; }; @@ -4588,48 +4785,49 @@ in with self; { bedr = derive2 { name="bedr"; version="1.0.4"; sha256="052sn90gjr34hjgyndzvcl66pv22q0kjqbx95y1pdydiwhwmhpa3"; depends=[data_table R_utils testthat VennDiagram yaml]; }; beepr = derive2 { name="beepr"; version="1.3"; sha256="061sfld23b516jws4llml0a4jsdk4z74rll4z58l2rvahkqsdrfp"; depends=[audio stringr]; }; beeswarm = derive2 { name="beeswarm"; version="0.2.3"; sha256="0hy89bwv7jixlg91li1fywa77916am2whqp1m1fx1khd45g44581"; depends=[]; }; + beezdemand = derive2 { name="beezdemand"; version="0.1.0"; sha256="1i6p36cfvz87k6llpibklmdbjb7vp1v38ijxaqkmv1jzc28sj3cl"; depends=[ggplot2 nlmrt nls2 nlstools reshape2]; }; beginr = derive2 { name="beginr"; version="0.1.3"; sha256="1wrxcgapan19p2zwvmrz9fg9hwkxfm0x2qcqkanmn0mmsaixhs3h"; depends=[cranlogs]; }; + behaviorchange = derive2 { name="behaviorchange"; version="0.0.2"; sha256="1g5r4mnqpls16836pi2dr7lm308c677m5j8xha6c12pnr39rnc4a"; depends=[data_tree DiagrammeR ggplot2 googlesheets gridExtra gtable magrittr ufs userfriendlyscience viridis]; }; behavr = derive2 { name="behavr"; version="0.3.1"; sha256="18rpln7db8cnaj6f47vjgh7q2xbcjmd0vhfbmvm82fr7qhdnnyc0"; depends=[data_table]; }; belex = derive2 { name="belex"; version="0.1.0"; sha256="1563yngc1lvncmx3h6kgsj1r6k3hvxidh6h9rb7apxs2rq5k32ms"; depends=[XML]; }; belg = derive2 { name="belg"; version="0.2.3"; sha256="1ss40fxfmzld4fqpbkc3knsxdqc4nmllgvl2v4nyqzcalcknzvvf"; depends=[Rcpp RcppArmadillo]; }; bench = derive2 { name="bench"; version="1.0.1"; sha256="0hiwm3jbwr9wjdfx0nk3djskiw1q900h4acaqjgy97p8gl0ig3g8"; depends=[glue pillar profmem rlang tibble]; }; benchden = derive2 { name="benchden"; version="1.0.5"; sha256="1cwcgcm660k8rc8cpd9sfpzz66r55b4f4hcjc0hznpml35015zla"; depends=[]; }; - benchmark = derive2 { name="benchmark"; version="0.3-6"; sha256="05rgrjhbvkdv06nzbh0v57b06vdikrqc1d29wirzficxxbjk1hih"; depends=[ggplot2 plyr proto psychotools relations reshape scales]; }; benchmarkme = derive2 { name="benchmarkme"; version="0.6.0"; sha256="0w98q4b814bz3q0vqdfnwqrgfrky3ggsyyzmdiz17kv6xk17qds8"; depends=[benchmarkmeData doParallel foreach httr Matrix]; }; benchmarkmeData = derive2 { name="benchmarkmeData"; version="0.5.1"; sha256="0vv5d90qv81lwrgi5d3zbwlwxwjqlx70xi4ljhcc0ljv50x2rvv4"; depends=[]; }; - benchr = derive2 { name="benchr"; version="0.2.0"; sha256="042ijh6726s116z7w2cky5l105p3dj7xsfmlwkigsbrmya8x5d37"; depends=[Rcpp RcppProgress]; }; + benchr = derive2 { name="benchr"; version="0.2.2"; sha256="1ls75pmhvj6d4wc9knifv6d1dfr0avfhry370m636mhfpw4z2ybf"; depends=[Rcpp RcppProgress]; }; benford_analysis = derive2 { name="benford.analysis"; version="0.1.4.1"; sha256="0acbjjavbvsaigy78b5k9qhj8011751116lqln8j0v8w1k3vqwqm"; depends=[data_table]; }; bentcableAR = derive2 { name="bentcableAR"; version="0.3.0"; sha256="1gjrlv94av9955jqhicaiqm36rrgmy0avxn9y7wbp2s1sbg7fyg7"; depends=[]; }; benthos = derive2 { name="benthos"; version="1.3-5"; sha256="1mzhqqy4dblwv70v1ky5gzrr3jyky9k4wibbp589jjjrga2vhq2a"; depends=[dplyr lazyeval readr]; }; ber = derive2 { name="ber"; version="4.0"; sha256="0gl7rms92qpa5ksn8h3ppykmxk5lzbcs13kf2sjiy0r2535n8ydi"; depends=[MASS]; }; berryFunctions = derive2 { name="berryFunctions"; version="1.17.0"; sha256="13wslhr3xm9davx3s69as41r53m3x0gm3mrnwrbsqcbmf9n0zbv3"; depends=[abind]; }; - bestNormalize = derive2 { name="bestNormalize"; version="1.2.0"; sha256="0ixv5w4x4413131fxl47c3ma0h9ac1khakp89psnci4qjxbcx5xc"; depends=[LambertW nortest]; }; + bestNormalize = derive2 { name="bestNormalize"; version="1.3.0"; sha256="0wipxc4dqhpmxqb8nkfp2pgxp7854r1rgrmppvlja7v5hwz4mgw7"; depends=[doParallel doRNG dplyr foreach LambertW nortest]; }; bestglm = derive2 { name="bestglm"; version="0.37"; sha256="0ghhi4g75mgq2pnkrvw188s65132i1d7v3hahnjrsnx4vrr8a9lz"; depends=[glmnet grpreg lattice leaps pls]; }; - betaboost = derive2 { name="betaboost"; version="1.0.0"; sha256="11r6vywkb8182r1797aijm3czrxxghv5hjbadw61ick0masvcpml"; depends=[gamboostLSS mboost]; }; + betaboost = derive2 { name="betaboost"; version="1.0.1"; sha256="1zdyzxl2kp2i5lkiz280wz4av9wqklbn25zmq6n4yb6a579yjfn8"; depends=[gamboostLSS mboost]; }; betacal = derive2 { name="betacal"; version="0.1.0"; sha256="19wgpgf9yhckl9qx9v24f4yh055wfalphcxwm7lg68px6ap2pxl9"; depends=[]; }; betafam = derive2 { name="betafam"; version="1.0"; sha256="1nf5509alqnr5qpva36f1wb7rdnc084p170h91jv89xvzsidqxca"; depends=[]; }; betalink = derive2 { name="betalink"; version="2.2.1"; sha256="1wskr8nh1jzcrnc8fn58lscphsvj5z9p1i1pnpfdjn60mdb09rkp"; depends=[igraph plyr stringr]; }; - betapart = derive2 { name="betapart"; version="1.5.0"; sha256="0hk016hpdb927d142rfa13kjwhgzki1fy4xqbwdphzwv37nyxag7"; depends=[ape geometry picante rcdd]; }; + betapart = derive2 { name="betapart"; version="1.5.1"; sha256="0j72rfvnn0ag6vxp8nw5v68n3qblyp5gd0y8z1kchs4dbq1v288g"; depends=[ape fastmatch geometry picante rcdd]; }; betaper = derive2 { name="betaper"; version="1.1-0"; sha256="1gr533iw71n2sq8gga9kzlah7k28cnlwxb2yh562gw6mh1axmidm"; depends=[ellipse vegan]; }; - betareg = derive2 { name="betareg"; version="3.1-0"; sha256="05s5lszj22186xhvk0dxgz4vqfvmss40pbh147mwqkz1h48z5pf7"; depends=[flexmix Formula lmtest modeltools sandwich]; }; + betareg = derive2 { name="betareg"; version="3.1-1"; sha256="07cblxprybqkv55805za6qg47vw95azxn4446frxwkramza4ygv2"; depends=[flexmix Formula lmtest modeltools sandwich]; }; betas = derive2 { name="betas"; version="0.1.1"; sha256="1v85r6lrk21viwzam42gi42bgbwh5ibn3dpbh3aqrf3dnn1rdsyd"; depends=[robust]; }; betategarch = derive2 { name="betategarch"; version="3.3"; sha256="0hqvyps3lwix2fkzk18wrkhxpqhgardvib9sq1ip8gn8sn1dsi8y"; depends=[zoo]; }; bethel = derive2 { name="bethel"; version="0.2"; sha256="1zlkw672k1c5px47bpa2vk3w2906vkhvifz20h6xm7s51gmm64i0"; depends=[]; }; - beyondWhittle = derive2 { name="beyondWhittle"; version="0.18.1"; sha256="0aph1sshnxk7aajnm871zw9fadxbhv8l93kbydzh69b8kiz6wi6x"; depends=[ltsa Rcpp]; }; + beyondWhittle = derive2 { name="beyondWhittle"; version="1.0"; sha256="15q3dp5aw7csr3sp12vxhjvhazryk9b67x1spp0kv7qxy1v2jl95"; depends=[ltsa MASS Rcpp]; }; bezier = derive2 { name="bezier"; version="1.1"; sha256="1bhqf1zbshkf1x8mgqp4mkgdxk9jxi51xj6i47kqkyn9gbdzch0c"; depends=[]; }; bfa = derive2 { name="bfa"; version="0.4"; sha256="08n6446xl2w8z0rsqi6v2hp9cp744frxw6vrbxg5cpybhyyfzr36"; depends=[coda Rcpp RcppArmadillo]; }; bfast = derive2 { name="bfast"; version="1.5.7"; sha256="0n75minka55rxpvs3qkj0c65ydn1gc3i8lkr2gdyn1adjkl5yn01"; depends=[forecast raster sp strucchange zoo]; }; bfp = derive2 { name="bfp"; version="0.0-39"; sha256="1g3sbmi1yl7ai8v6a2ri54jqv64wzfy580s8i1w9xwbqjcrpj77m"; depends=[Rcpp]; }; - bfw = derive2 { name="bfw"; version="0.1.0"; sha256="13hbg2kr56yfg2r58cw3l631rq1kv8bk9gcdqbgspsjn04g1iq2f"; depends=[coda MASS rJava runjags]; }; + bfw = derive2 { name="bfw"; version="0.2.0"; sha256="05h4i3mpwgdn3w1163qhzzhzrcxzsw3y35pjzj0w4kjc28nkp354"; depends=[coda MASS runjags]; }; bgeva = derive2 { name="bgeva"; version="0.3-1"; sha256="0qm4xknyab8hdyn3in2hsvm8s062cnmqqf41b5jvax1mi5hs0z8c"; depends=[magic mgcv trust]; }; bgmfiles = derive2 { name="bgmfiles"; version="0.0.6"; sha256="10qldfjjq5fx5jrrakdxc8k2pf0vp8ifg18nq56lvx9n28mqigim"; depends=[]; }; bgmm = derive2 { name="bgmm"; version="1.8.3"; sha256="09hsqjjyzlpl0fqb7832j5ydrr0yc42zb1c9q1y5hbrms7yp00p8"; depends=[car combinat lattice mvtnorm]; }; - bgsmtr = derive2 { name="bgsmtr"; version="0.1"; sha256="09h118msqf9yl2z7d6dsvgn4vrvy43ynznajj58k7gkxdlm1nimg"; depends=[coda EDISON Matrix mnormt mvtnorm sparseMVN statmod]; }; + bgsmtr = derive2 { name="bgsmtr"; version="0.2"; sha256="05d4bd350parb3nfwb2arb1z2g24l6pr81z9m5q76rhhsxp6rzn8"; depends=[coda EDISON inline LaplacesDemon Matrix matrixcalc miscTools mnormt mvtnorm Rcpp sparseMVN statmod TargetScore]; }; bhm = derive2 { name="bhm"; version="1.13"; sha256="1iq1hjc7xn2kmmxgzv6mzcvvf48kqp5b8lavmzrqykak3v4z02nz"; depends=[coda survival]; }; - bhrcr = derive2 { name="bhrcr"; version="1.0.0"; sha256="0rqn9wkd25d7l295n55idsf1zch1niz5f05qnsbd1gqrq7nw42xn"; depends=[AER Cairo MASS MCMCpack msm mvtnorm survival]; }; + bhrcr = derive2 { name="bhrcr"; version="1.0.1"; sha256="1frkzngrxy65nzdz3aylpj4kfikd1giwpwsy0bbhr5a9zbpr405v"; depends=[AER Cairo MASS MCMCpack msm mvtnorm survival]; }; biasbetareg = derive2 { name="biasbetareg"; version="1.0"; sha256="1562zdin0y5mrp36ih11ir3h9cv49cx1l98chxd89fkj8x3c1fbg"; depends=[betareg]; }; bib2df = derive2 { name="bib2df"; version="1.0.1"; sha256="1rprcnqvs4nicd26h34kpgzlpl22430dikxs2q1sjf861qachi10"; depends=[dplyr httr humaniformat stringr]; }; - bibliometrix = derive2 { name="bibliometrix"; version="1.9.4"; sha256="0l2lqz9qx8f86dz2asvv11iv366hvjn2fjamgm98winrvyrzqnsw"; depends=[factoextra FactoMineR ggplot2 ggraph ggrepel igraph Matrix RColorBrewer RISmed rscopus SnowballC stringdist stringr]; }; + bibliometrix = derive2 { name="bibliometrix"; version="2.0.1"; sha256="1j7gf3r7z622m3gyaf8mw16gspnj59ad97h9zn9wk1kmy02bmwnp"; depends=[dplyr DT factoextra FactoMineR ggplot2 ggraph ggrepel igraph Matrix networkD3 RColorBrewer RISmed rscopus shiny shinycssloaders shinythemes SnowballC stringdist stringr]; }; bibtex = derive2 { name="bibtex"; version="0.4.2"; sha256="0wl3925ryd54g1nv3ncwllc493d39dpgy5md61940h69c0van1hz"; depends=[stringr]; }; biclust = derive2 { name="biclust"; version="2.0.1"; sha256="1y5n6wfa1lx88ck3x09rcg0dh3pw89225h85hmq2la1s1fpa48i0"; depends=[additivityTests colorspace flexclust ggplot2 lattice MASS tidyr]; }; bife = derive2 { name="bife"; version="0.5"; sha256="0lzij8sazfdr687bi5lfp5ndvwlx18vyzr3svc0zv9mnv8s8vfvd"; depends=[Formula Rcpp RcppArmadillo]; }; @@ -4641,33 +4839,37 @@ in with self; { bigReg = derive2 { name="bigReg"; version="0.1.2"; sha256="1hmvh5j40zpzz6c88hmikphps8rb741yvkg60dxmkfl8gxqsrp3w"; depends=[MASS Rcpp RcppArmadillo uuid]; }; bigalgebra = derive2 { name="bigalgebra"; version="0.8.4"; sha256="19rv552ac0q9djc1yvpldkc0lipdf6q143m9dnndpsqs7ayqlr4g"; depends=[BH bigmemory]; }; biganalytics = derive2 { name="biganalytics"; version="1.1.14"; sha256="1hsqdg5hkhs6z9pwvn055q02hzpksjwrf33q5zdnkm387g188ca6"; depends=[BH biglm bigmemory foreach Rcpp]; }; - bigchess = derive2 { name="bigchess"; version="1.0.0"; sha256="14hjrma9qjyi9nypbvrqrzf6d1fxh4rrc48yq95vsrg7vr4han5x"; depends=[ff ffbase]; }; - bigdatadist = derive2 { name="bigdatadist"; version="1.0"; sha256="1xmralvhdczd270c2ym47ywc7gkqs247vpjr1vpmqsgiqvr7n1ql"; depends=[FNN MASS pdist rrcov]; }; + bigchess = derive2 { name="bigchess"; version="1.1.0"; sha256="0w6zhlljnza16xb1zsw4lan9al4pynbvk4d830yvqpd3bnb6aidk"; depends=[ff ffbase]; }; + bigdatadist = derive2 { name="bigdatadist"; version="1.1"; sha256="16gkybwcp9sxqb0iic2fhmc4gndr44ayg14wrfcjvjaj4g5r6xs2"; depends=[FNN MASS pdist rrcov]; }; biglars = derive2 { name="biglars"; version="1.0.2"; sha256="17zs25dvlja9ynx2fm5f4nmgkx4mnyqs5iscwsyahr6qigx1rz9x"; depends=[ff]; }; biglasso = derive2 { name="biglasso"; version="1.3-6"; sha256="044l2l34l4pl7ijwgq569cn8x5clj795qpfwb1b9qfwvggvgzgni"; depends=[BH bigmemory Matrix ncvreg Rcpp RcppArmadillo]; }; bigleaf = derive2 { name="bigleaf"; version="0.6.5"; sha256="0l2a4xi9jyx9sd79fvva9rqqxb4mld99k0gycn07fb81m8lkf690"; depends=[robustbase]; }; biglm = derive2 { name="biglm"; version="0.9-1"; sha256="1z7h4by457z93k5i6qf5rq7xmd1y2kcd1rq4pv465cd32d4mb2g1"; depends=[DBI]; }; - bigmatch = derive2 { name="bigmatch"; version="0.2.1"; sha256="0c2rg6fiphb01xz6lm34766gwz7m054bgismwbx6wscmw51nj7rw"; depends=[liqueueR mvnfast plyr rcbalance]; }; + biglmm = derive2 { name="biglmm"; version="0.9-1"; sha256="1f4w59jvq7lq0bh5fs41czw0yc8h56iijbj0hlcq47zyqx6gll9a"; depends=[DBI]; }; + bigmatch = derive2 { name="bigmatch"; version="0.4.1"; sha256="13sdvjik3x35csjs5cwbymgkkvsj26j7fp25xijs41sfa4kcri53"; depends=[liqueueR mvnfast plyr rcbalance]; }; bigmemory = derive2 { name="bigmemory"; version="4.5.33"; sha256="0ycl9dzm3drpyas625h34rir5bnbjlncxlvawfsfmqwcbmwdjdvj"; depends=[BH bigmemory_sri Rcpp]; }; bigmemory_sri = derive2 { name="bigmemory.sri"; version="0.1.3"; sha256="0mg14ilwdkd64q2ri9jdwnk7mp55dqim7xfifrs65sdsv1934h2m"; depends=[]; }; bigml = derive2 { name="bigml"; version="0.1.2"; sha256="0vl5krjbgckknxwl26b2hn63jhb80zbn7abpckhxzxfxzncpnfz9"; depends=[plyr RCurl RJSONIO]; }; + bigreadr = derive2 { name="bigreadr"; version="0.1.3"; sha256="1cdr7i8y7bvhfajs3bmxlljbda2922dgbiwkkyxn2k5cn384plak"; depends=[data_table fpeek Rcpp]; }; bigrquery = derive2 { name="bigrquery"; version="1.0.0"; sha256="0z7wsqxla1pg2454l35kkfaz2s9hppwvpz1pds286ddldbbmyzis"; depends=[assertthat curl DBI glue httr jsonlite prettyunits progress rapidjsonr Rcpp tibble]; }; bigsplines = derive2 { name="bigsplines"; version="1.1-1"; sha256="1kf04p2lglzdi1fdryk27nmj2a2jca2ii7ki8vak93sq21isb179"; depends=[quadprog]; }; - bigstep = derive2 { name="bigstep"; version="0.7.4"; sha256="0g45fgnamdv1v3b8xvpsj4rzhisyvbbddwyzvzvmmi4a8w20pzn5"; depends=[bigmemory matrixStats R_utils RcppEigen speedglm]; }; + bigstatsr = derive2 { name="bigstatsr"; version="0.6.2"; sha256="1dv6615yn26lpqj4nswji74zp4zjp6j5m1n0h1h3jffdh7xai46d"; depends=[BH bigreadr cowplot doParallel foreach ggplot2 Rcpp RcppArmadillo RSpectra]; }; + bigstep = derive2 { name="bigstep"; version="1.0.0"; sha256="1bkh7a4qzvh567qglkyidlfam5qj33aih9k8ndxj2ng6dcq38lbd"; depends=[bigmemory magrittr matrixStats R_utils RcppEigen speedglm]; }; bigtabulate = derive2 { name="bigtabulate"; version="1.1.5"; sha256="1jvp3m0ms2cav9z8vvhh80gsa0kvc351brv2jq99rxv1mwvpa4xj"; depends=[BH biganalytics bigmemory Rcpp]; }; bigtcr = derive2 { name="bigtcr"; version="1.1"; sha256="1l03yc28afdm7glbw4ay0zsywjgqg5l90qz1hfhslsy8gg7d5wq5"; depends=[]; }; bigtime = derive2 { name="bigtime"; version="0.1.0"; sha256="136gy2i4qwa2drklllyzp3z0dbijlavgf3sxy73bf84df2yq1c9i"; depends=[corrplot lattice MASS Rcpp RcppArmadillo RcppEigen zoo]; }; - bikedata = derive2 { name="bikedata"; version="0.2.0"; sha256="1iihf1nf3ybvkhq4j3c5p1271c56vpsmsrjf3q2r9n98g3apa6k2"; depends=[BH DBI dodgr httr lubridate magrittr Rcpp readxl reshape2 RSQLite tibble xml2]; }; + bikedata = derive2 { name="bikedata"; version="0.2.2"; sha256="02qwi0rdrg6pmimfqc9y2nkb9l9aks8zxgqz9paqyr2b2psib7ym"; depends=[BH DBI dodgr httr lubridate magrittr Rcpp readxl reshape2 RSQLite tibble xml2]; }; bikeshare14 = derive2 { name="bikeshare14"; version="0.1.0"; sha256="12399c01s8p9rmpi3fpy4rm7xxnsf627slz3h234frbahhs882c4"; depends=[]; }; bild = derive2 { name="bild"; version="1.1-5"; sha256="03has1zi57inicahl52ja006vv5cdndyxfsxp77l6nc3zc6ixna8"; depends=[]; }; billboard = derive2 { name="billboard"; version="0.1.0"; sha256="1z3y8dijhc1381y91n5zq305xzm1gpvs0g4mdpfr7zrblpa8ws39"; depends=[tibble]; }; - billboarder = derive2 { name="billboarder"; version="0.2.2"; sha256="14jq3k2d0bsc2l8hsc2shps3hw6fq0k0w5m0yj9k4hbidgpg9z7n"; depends=[ggplot2 htmlwidgets jsonlite magrittr scales]; }; + billboarder = derive2 { name="billboarder"; version="0.2.4"; sha256="0y4rcrcdi8jfp5dha4vzvr5d0rq73wlbvszb517bdwgg4cgh2hgq"; depends=[ggplot2 htmltools htmlwidgets jsonlite magrittr scales]; }; bimetallic = derive2 { name="bimetallic"; version="1.0"; sha256="181qi4dr0zc7x6wziq7jdc1his20jmprfpq3hrfm56fr5n1sj8wl"; depends=[]; }; bimixt = derive2 { name="bimixt"; version="1.0"; sha256="0nhszpzjqy8z3vngl5jdzqxzshnn92wgi0ci5n3n5kzi24xkfrzc"; depends=[pROC]; }; - binGroup = derive2 { name="binGroup"; version="2.1-1"; sha256="1rwmsrm4ghpvb1vldph2frwglfvajwyj7bzi1f6mhnm9mrg80blj"; depends=[partitions]; }; + binGroup = derive2 { name="binGroup"; version="2.2-1"; sha256="0cb7j6b0s3y56mv1967awwri0kv0rf3sr3vwf9gc2zbjggxi9ffp"; depends=[partitions Rdpack]; }; binMto = derive2 { name="binMto"; version="0.0-7"; sha256="0rg9rsdy14jx7zjv60krcz1vh0sxqimsai0wynhx2sx0kydw4ngy"; depends=[mvtnorm]; }; binaryGP = derive2 { name="binaryGP"; version="0.2"; sha256="0i4xi0gxk0lamjdygyx0azdp3kfqmva1g20nl3p65w4yx77m88d6"; depends=[GPfit lhs logitnorm nloptr Rcpp RcppArmadillo]; }; binaryLogic = derive2 { name="binaryLogic"; version="0.3.9"; sha256="19ig9qgjjnivfihjy41pc13qlrb95679mmk4zks5lbbri8qi4qxj"; depends=[]; }; + binb = derive2 { name="binb"; version="0.0.3"; sha256="14fzsaxlh0kl85gapw9xizgd201zbbcqh2hngiqap6fzha73gvc8"; depends=[knitr rmarkdown]; }; binda = derive2 { name="binda"; version="1.0.3"; sha256="15rhxnlif7agblzd09gyllkqkf5d8cc75b4vmp7grx8a6y7w47g0"; depends=[entropy]; }; bindata = derive2 { name="bindata"; version="0.9-19"; sha256="15ya21fz1kvq4qsppkn9ypiqvaq8q4vszdcgcymampa7zc07z2ld"; depends=[e1071 mvtnorm]; }; bindr = derive2 { name="bindr"; version="0.1.1"; sha256="1l05fpk2yql3jka321c0bdgx6mqq9pvfrg2844lbjfpbgjkmqy3w"; depends=[]; }; @@ -4675,9 +4877,10 @@ in with self; { binequality = derive2 { name="binequality"; version="1.0.3"; sha256="0hhcmw1mq785zylcxghfnazi3xvnl7sqpqll8fqdk064a4drqkw1"; depends=[gamlss gamlss_cens gamlss_dist ineq survival]; }; binford = derive2 { name="binford"; version="0.1.0"; sha256="04mpdvynlm4gddybys04k0446gc9hyq0vaxr6a525p76ls5aw4b1"; depends=[]; }; bingat = derive2 { name="bingat"; version="1.3"; sha256="1y68rgafipfad78yrzcygdszgy1d5q739kap06pzr78bn3i8hiwa"; depends=[doParallel foreach gplots matrixStats network vegan]; }; - binhf = derive2 { name="binhf"; version="1.0-2"; sha256="040ss4jwqar4b5wb96gpi41xhmlqcbvs4vphxmfj8xs12hd7r6wl"; depends=[adlift EbayesThresh wavethresh]; }; + binhf = derive2 { name="binhf"; version="1.0-3"; sha256="1vdw2s8zddp7gad8l3c4jpmnjcc0f5wpqbrp6gp9lgp1c3qa505y"; depends=[adlift EbayesThresh wavethresh]; }; + binman = derive2 { name="binman"; version="0.1.1"; sha256="0hm0h285p4v9lhrqjy8s22f1s1vmfpfla5iaycpj8vw3qb3632az"; depends=[assertthat httr jsonlite rappdirs semver xml2 yaml]; }; binneR = derive2 { name="binneR"; version="1.1.1"; sha256="07cfcp9jj5bks8kmxvir9y9z7fj44hvy1wyrg4jy029dvkz8g2ki"; depends=[dplyr magrittr mzR plyr tidyr]; }; - binnednp = derive2 { name="binnednp"; version="0.1.0"; sha256="0cfgz6828b2525dmph5n4zxdgkbx0nsrm4k2azhw1xfi3pz4z6ga"; depends=[fitdistrplus kedd mclust nor1mix Rcpp Rdpack]; }; + binnednp = derive2 { name="binnednp"; version="0.2.0"; sha256="1dklymwsz0l0xklmvq34mf11chd2hm91r5qa031zjf1hsm3gplh8"; depends=[fitdistrplus kedd mclust nor1mix Rcpp Rdpack]; }; binom = derive2 { name="binom"; version="1.1-1"; sha256="0mjj92dqf5q69jxzqya4izb1mly3mkydbnmlm4wb3zqqg82a324c"; depends=[]; }; binomSamSize = derive2 { name="binomSamSize"; version="0.1-5"; sha256="1an6dcqsjh5r0w4kc3n6yfvvha5qhrb2i4bpf7g5ykhl3i60zfcc"; depends=[binom]; }; binomen = derive2 { name="binomen"; version="0.1.2"; sha256="0w1m5b2qvq3g28hahfgkq7wrrjqy43x1x4kvrrrf284s5ka90531"; depends=[dplyr jsonlite lazyeval]; }; @@ -4691,7 +4894,7 @@ in with self; { bio3d = derive2 { name="bio3d"; version="2.3-4"; sha256="1zmswa9xs81lbrlkkgi8dvv9xpf0ynqjqwy1k36szvfb8ar9mczr"; depends=[Rcpp]; }; bioOED = derive2 { name="bioOED"; version="0.1.4"; sha256="1rjcqrni5xag97pxfsf40isr2c8pkqsvihf86phak8ngwl7qdgmc"; depends=[bioinactivation corrplot dplyr FME ggplot2 MEIGOR]; }; bioPN = derive2 { name="bioPN"; version="1.2.0"; sha256="0mvqgsfc7d4h6npgg728chyp5jcsf49xhnq8cgjxfzmdayr1fwr8"; depends=[]; }; - bioacoustics = derive2 { name="bioacoustics"; version="0.1.2"; sha256="0xhlmcfb7ll4w655dsq6vdjn6yl2imrw6da2xg5csk2s9yg059wq"; depends=[htmltools moments Rcpp stringr tuneR]; }; + bioacoustics = derive2 { name="bioacoustics"; version="0.1.5"; sha256="159dyqj5r5s4673nkcvv432gcc17f0qygnyjjd6mq6l7a38zb017"; depends=[htmltools moments Rcpp stringr tuneR]; }; biofiles = derive2 { name="biofiles"; version="1.0.0"; sha256="1bglgl2jcp6jy3f7xwndil56i98xx4kn518s3fqdixw7n5ibmqd2"; depends=[assertthat BiocGenerics Biostrings foreach GenomeInfoDb GenomicRanges IRanges iterators Rcpp RCurl reutils S4Vectors XVector]; }; biogas = derive2 { name="biogas"; version="1.10.3"; sha256="1qfidjwhaxg5zplzkldhj4zqg81xrcqmvh9x5km5yhyymzr6y4vs"; depends=[]; }; biogeo = derive2 { name="biogeo"; version="1.0"; sha256="14sqgg8b06gp5dajxvyj9s3ndsk7jpkfr0mkyl2l61kgp6qx53rh"; depends=[maptools raster sp stringr vegan]; }; @@ -4708,7 +4911,7 @@ in with self; { biosignalEMG = derive2 { name="biosignalEMG"; version="2.1.0"; sha256="0bbkrfqkmks4z8c7rh0k43lvm71vn3fzrw3kpj012ym77whwkvay"; depends=[signal]; }; biotic = derive2 { name="biotic"; version="0.1.2"; sha256="1p18jkdd263dgk90626n9awkj6m4zn1n7897596fzrzrahksa978"; depends=[]; }; biotools = derive2 { name="biotools"; version="3.1"; sha256="15y3ccmj1gslzc0lp0gvc66hf0yigx3zkqnw46crgrizjm2kmjay"; depends=[boot lattice MASS rpanel SpatialEpi tkrplot]; }; - bipartite = derive2 { name="bipartite"; version="2.08"; sha256="16j70ikzprjsm81w9bqbp26xxf14ckw654dy7c5hkz24x62qsx2i"; depends=[fields igraph MASS permute sna vegan]; }; + bipartite = derive2 { name="bipartite"; version="2.11"; sha256="1ahn696g881dc9mnf67pglf0kskfk2zqkj2afvinqxmwal827f72"; depends=[fields igraph MASS permute sna vegan]; }; biplotbootGUI = derive2 { name="biplotbootGUI"; version="1.1"; sha256="0k92z9iavvq5v56x2hgkmrf339xl7ns1pvpqb4ban8r1j8glzawi"; depends=[cluster dendroextras MASS rgl shapes tcltk2 tkrplot]; }; birdnik = derive2 { name="birdnik"; version="0.1.1"; sha256="17szs4yh3gmf6glwldbk9bhk6f40si2zv53zvgqmg3lbl3z09dv1"; depends=[httr]; }; birdring = derive2 { name="birdring"; version="1.3"; sha256="1vlivapmgq3kz2zz795c7hcfpibnqcfnxp7m42di37yngqc90q87"; depends=[geosphere ks lazyData raster rgdal rgeos rworldmap rworldxtra sp]; }; @@ -4722,6 +4925,8 @@ in with self; { bitops = derive2 { name="bitops"; version="1.0-6"; sha256="176nr5wpnkavn5z0yy9f7d47l37ndnn2w3gv854xav8nnybi6wwv"; depends=[]; }; bitrugs = derive2 { name="bitrugs"; version="0.1"; sha256="0sqgp05b902mdldr4ckz4knmkbsqvgl1vx0l792cn2r437yqlgp3"; depends=[]; }; bivarRIpower = derive2 { name="bivarRIpower"; version="1.2"; sha256="0vgi0476rwali6k8bkp317jawzq5pf04v75xmycpmadb7drnpzy0"; depends=[]; }; + bivariate = derive2 { name="bivariate"; version="0.2.2"; sha256="1kf34gdhi0cnngwp3xgk3qmiqxav8qldign93mxygxx8as2za00x"; depends=[KernSmooth mvtnorm]; }; + bivgeom = derive2 { name="bivgeom"; version="1.0"; sha256="1cn8k7q011whr4f7zig85dsrkz04614z9ns2ky6k6i16s5n3glxy"; depends=[bbmle copula]; }; bivrp = derive2 { name="bivrp"; version="1.1"; sha256="0ycb3ppz8j6wd8ha52wy8xw0n5a5w4f46j6gk4hy151yslr00qay"; depends=[MASS]; }; biwavelet = derive2 { name="biwavelet"; version="0.20.17"; sha256="183h9mdlpizikg1xnrnd03hbij4fnf5ibsad4jcfmh6d73qcgn9b"; depends=[fields foreach Rcpp]; }; biwt = derive2 { name="biwt"; version="1.0"; sha256="1mb3x8ky3x8j4n8d859i7byyjyfzq035i674b2dmdca6mn7paa14"; depends=[MASS rrcov]; }; @@ -4730,55 +4935,57 @@ in with self; { bkmr = derive2 { name="bkmr"; version="0.2.0"; sha256="0dk6dn73bqlvwinn3aginls4533931xcr3h59k0w60yxs3v8yakv"; depends=[dplyr fields magrittr MASS nlme tidyr tmvtnorm truncnorm]; }; blackbox = derive2 { name="blackbox"; version="1.1.25"; sha256="1xjljxvh8jg5gnfwdb6f8ifn5s30dxjlnbal97kinq0ad33lvs48"; depends=[foreach geometry lattice MASS nloptr numDeriv pbapply proxy rcdd Rcpp RcppEigen spaMM]; }; blandr = derive2 { name="blandr"; version="0.5.1"; sha256="1rqas71hlf000b3z824d8ljshf8bx91bbrzaxxnx5n3chv19w6z6"; depends=[ggplot2 jmvcore knitr R6 rmarkdown stringr]; }; - blastula = derive2 { name="blastula"; version="0.2.0"; sha256="11vaqsfm0kszx3iq38c8vbqnwkfk77lv5021l2zq9iaxz9d83s7k"; depends=[commonmark downloader dplyr ggplot2 glue htmltools httr knitr magrittr purrr rlang stringr tibble tidyr]; }; + blastula = derive2 { name="blastula"; version="0.2.1"; sha256="1w9g858c6p7qzv86pfndycvpgv6k63r85wlq11249mi2zqzvh7rl"; depends=[commonmark downloader dplyr ggplot2 glue htmltools httr magrittr stringr tidyr]; }; blavaan = derive2 { name="blavaan"; version="0.3-2"; sha256="0rbwdxajrzr43wmqjmxw2hh390inba6nj15yfwqr25ipw0l2mwl3"; depends=[coda lavaan loo MCMCpack mnormt nonnest2]; }; blendedLink = derive2 { name="blendedLink"; version="1.0"; sha256="19d1pnjag89jjvkl5a6wx531qjqp4cv5jk95md6jby27yr52r8vp"; depends=[]; }; blender = derive2 { name="blender"; version="0.1.2"; sha256="1qqkfgf7fzwcz88a43cqr8bw86qda33f18dg3rv1k77gpjqr999c"; depends=[vegan]; }; + blin = derive2 { name="blin"; version="0.0.1"; sha256="1h94azm7gli9i4v3li5c1p36p3rkcj2p5j6rqzlzf0pcqs0bsc09"; depends=[abind glmnet MASS Matrix mvtnorm]; }; blink = derive2 { name="blink"; version="0.1.0"; sha256="0gi5dk2js3mssg2blji7yddrbmsynp9nr3qhzlpkpy15i81mg2xy"; depends=[plyr RecordLinkage stringdist]; }; blkbox = derive2 { name="blkbox"; version="1.0"; sha256="14bl0b5w46gb7v8p94df5r56nj849r7jqisajagvd1irda3vkc7z"; depends=[bartMachine caret dplyr e1071 ggplot2 glmnet gtools kknn knitr magrittr nnet pamr party plyr pROC randomForest reshape reshape2 rJava rmarkdown shiny shinyjs stringr tibble tidyr xgboost]; }; - blkergm = derive2 { name="blkergm"; version="1.1"; sha256="0giknhcl14b4djn5k5v5n33b7bc3f8x6lx2h4jr25kpd89aynhq5"; depends=[ergm network statnet_common]; }; blm = derive2 { name="blm"; version="2013.2.4.4"; sha256="1w6c30cq38j4i1q4hjg12l70mhy5viw886l1lsnxyvniy113in4i"; depends=[]; }; blme = derive2 { name="blme"; version="1.0-4"; sha256="1ca2b0248k0fj3lczn9shfjplz1sl4ay4v6djldizp2ch2vwdgy2"; depends=[lme4]; }; blmeco = derive2 { name="blmeco"; version="1.1"; sha256="1hzg5dimzj1khygm9dv0y30mx1nf9vdhgicqdg1rvj7nf426h2ki"; depends=[arm lme4 MASS MuMIn]; }; blob = derive2 { name="blob"; version="1.1.1"; sha256="0lsg91hk508dd95ivig2lwg62qafwnarjw68110kx63cfk4zkjxc"; depends=[prettyunits]; }; blockTools = derive2 { name="blockTools"; version="0.6-3"; sha256="0023p0msfmp8swq4f5aff40m976np7y051x8hjizzw91hrfa4w2n"; depends=[MASS tibble]; }; - blockcluster = derive2 { name="blockcluster"; version="4.2.6"; sha256="0dskcwdh89a24j1lr829p9rrs88l13738b1gvsmsqrcrg9z955xc"; depends=[Rcpp rtkore]; }; + blockcluster = derive2 { name="blockcluster"; version="4.3.2"; sha256="15xp4navipxcr2pqxnxc47b0ifdazcsdkn5kmay883vzqj8c1nrb"; depends=[Rcpp rtkore]; }; + blockingChallenge = derive2 { name="blockingChallenge"; version="1.0"; sha256="0zj649gj4djdl0wly3gh99ayk1i1rk5dawcrrlzxxh56xqf4l19i"; depends=[]; }; blockmatrix = derive2 { name="blockmatrix"; version="1.0"; sha256="14k69ly4i8pb8z59005kaf5rpv611kk1mk96q6piyn1gz1s6sk6r"; depends=[]; }; blockmodeling = derive2 { name="blockmodeling"; version="0.3.1"; sha256="0cbx44mg5b9w1sz32wsgjprbss4mfx79sn6m42lvminf0023ds1r"; depends=[doParallel doRNG foreach Matrix]; }; blockmodels = derive2 { name="blockmodels"; version="1.1.1"; sha256="088629i4g63m8rnqmrv50dgpqbnxd1a4zl5wr3ga0pdpqhmd53wp"; depends=[digest Rcpp RcppArmadillo]; }; blockrand = derive2 { name="blockrand"; version="1.3"; sha256="1090vb26w6s7iqjcal0xbb3qb6p6j46a5w25f1wjdppd1spvh7f9"; depends=[]; }; - blocksdesign = derive2 { name="blocksdesign"; version="3.0"; sha256="17flj5glim3fa53k16p5pfl7dj12f76pgf4j6c1395xhn0qpww8i"; depends=[crossdes lme4]; }; + blocksdesign = derive2 { name="blocksdesign"; version="3.1"; sha256="1ykh0clj5fwli40cj4jvdkmvn4i4n4iba5sbasbaqdk45dlka5sf"; depends=[crossdes lme4]; }; blockseg = derive2 { name="blockseg"; version="0.5.0"; sha256="1zc6mvkdwjz7n0yj46c610gz2d3rwsjchbzdcg7k56j06vc9w4lp"; depends=[ggplot2 Matrix Rcpp RcppArmadillo reshape2 shiny]; }; - blogdown = derive2 { name="blogdown"; version="0.6"; sha256="02ahyzcapsjaanjiz1j9jx2wh8w2fa7dwbraj5w7bl7bln87cs16"; depends=[bookdown htmltools httpuv knitr rmarkdown servr xfun yaml]; }; + blogdown = derive2 { name="blogdown"; version="0.9"; sha256="1ps07zrr0zzp763hrfhqrmc927cl97v7l1r617s1lqhxwcji1fkx"; depends=[bookdown htmltools httpuv knitr rmarkdown servr xfun yaml]; }; blorr = derive2 { name="blorr"; version="0.1.0"; sha256="148x2ns7l9s7pb4ksg7h8ayn2lkr18gpfskvjasycccw1q44l8bk"; depends=[car caret checkmate cli clisymbols crayon descriptr dplyr e1071 ggplot2 glue gridExtra magrittr purrr Rcpp rlang scales shiny tibble]; }; - blsAPI = derive2 { name="blsAPI"; version="0.1.9"; sha256="1p7s799kix396fbx8ap9vy9akwpaps37awr18qbj53n9qcm74wkp"; depends=[RCurl rjson]; }; + blsAPI = derive2 { name="blsAPI"; version="0.2.1"; sha256="0p45g4qqaialh5m9bxgrvnc7nqmm0429syw0bml8h4h8vy4014a7"; depends=[httr rjson]; }; bmd = derive2 { name="bmd"; version="0.5"; sha256="0d4wxyymycb416sdn272292l70s1h2m5kv568vakx3rbvb8y6agy"; depends=[drc]; }; bmem = derive2 { name="bmem"; version="1.5"; sha256="1miiki743rraralk9dp12dsjjajj3iizcrfwmplf6xas6pl8sfk6"; depends=[Amelia lavaan MASS sem snowfall]; }; bmeta = derive2 { name="bmeta"; version="0.1.2"; sha256="19pm60xpmlanngq4nbibp0n5m98xw24b2xghz92ly31i3mkg2n68"; depends=[forestplot R2jags]; }; bmixture = derive2 { name="bmixture"; version="1.2"; sha256="1qyxjjhwd82a4y53nj9ww4c74hrp1v2p4ii71pa59n0pq9xkqj01"; depends=[BDgraph]; }; bmk = derive2 { name="bmk"; version="1.0"; sha256="1wxkrlrhmsxsiraj8nyiax9bqs834ln2swykmpf40wxspkykgfdq"; depends=[coda functional plyr]; }; - bmlm = derive2 { name="bmlm"; version="1.3.6"; sha256="0fjxz5p698izhfg14kizm04s1wslnkr8l2l19x3pz6qx8a2dcsgq"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; }; + bmlm = derive2 { name="bmlm"; version="1.3.8"; sha256="05h69pp9m0lsm3047y1l6r2h9v55kfb4flc60l7y6hh9ahh65h52"; depends=[BH ggplot2 Rcpp RcppEigen rstan StanHeaders]; }; bmmix = derive2 { name="bmmix"; version="0.1-2"; sha256="00php2pgpnm9n0mnamchi6a3dgaa97kdz2ynivrf38s0vca7fqx8"; depends=[ggplot2 reshape2]; }; bmotif = derive2 { name="bmotif"; version="1.0.0"; sha256="1zjwlsimihszg8gg7mvvi8xmzvlsdph9x6524gb28jmd24xb4gwj"; depends=[tensor]; }; bmp = derive2 { name="bmp"; version="0.3"; sha256="0jd67r11bn98hjwgyr6gas423787xy7ji2hq7ay80blkkcj91xxx"; depends=[]; }; bmrm = derive2 { name="bmrm"; version="3.7"; sha256="1lv4bcjri95nh4yqcp9hd3ad90lcp2drh1dwfn99i3344yw196x2"; depends=[LowRankQP lpSolve matrixStats]; }; - bnclassify = derive2 { name="bnclassify"; version="0.4.0"; sha256="02xs0qn2bmkjw48w1m4d424x8wncgvh8kk1d1jx5r2mv04h32rs7"; depends=[assertthat BH entropy matrixStats Rcpp rpart]; }; - bnlearn = derive2 { name="bnlearn"; version="4.3"; sha256="11zp8vf79h5a6dyijazld199pzp1lsgk3x049ykgy0bqjx2ivfvq"; depends=[]; }; + bnclassify = derive2 { name="bnclassify"; version="0.4.1"; sha256="1mz0waxgppq0mw83ylpy028shmcbxlgli7q22i6rdwpacll2jqsy"; depends=[assertthat BH entropy matrixStats Rcpp rpart]; }; + bnlearn = derive2 { name="bnlearn"; version="4.4"; sha256="0nyp8qprp40hn6hbjx869603hdl0lpsdikrdb3jscy9pb49fz5di"; depends=[]; }; bnnSurvival = derive2 { name="bnnSurvival"; version="0.1.5"; sha256="1d9jmfx0id4lmw122zga7hb52vlfdfqn4amhzpsmhyck99rv92j4"; depends=[pec prodlim Rcpp]; }; bnormnlr = derive2 { name="bnormnlr"; version="1.0"; sha256="0l2r7vqikak47nr6spdzgjzhvmkr9dc61lfnxybmajvcyy6ymqs9"; depends=[mvtnorm numDeriv]; }; bnpmr = derive2 { name="bnpmr"; version="1.2"; sha256="0vpqhs1h2mphn9w5yngb7lxvmzrhn7mkj7ca6hykhhg48s2ra98g"; depends=[]; }; bnpsd = derive2 { name="bnpsd"; version="1.0.1"; sha256="0f9w3qcdmf6qx5k01vddmxj1vadx6d9zcgw6prpbmcf3cdy3fwg0"; depends=[]; }; bnspatial = derive2 { name="bnspatial"; version="1.0.3"; sha256="018rb5wacjk8igyc0qbp9rk3vjz3lffx81awlba8d2npiaxq6jbv"; depends=[doParallel foreach gRain gRbase raster]; }; - bnstruct = derive2 { name="bnstruct"; version="1.0.2"; sha256="0n4gn1vhka694wdzignawyaca0rx2l0wjgw09fw42bkrswfjvxy1"; depends=[bitops igraph Matrix]; }; + bnstruct = derive2 { name="bnstruct"; version="1.0.4"; sha256="0xlq5y2pa7d36pj316idh84hkbgn0c8jjp0d2x1p92zfvd8xpxnw"; depends=[bitops igraph Matrix]; }; + bnviewer = derive2 { name="bnviewer"; version="0.1.0"; sha256="1f941l5j29my8zfb3dnwwpqkf1hw92ljis8jfgaq93b4ic8g7z5p"; depends=[bnlearn igraph visNetwork]; }; boa = derive2 { name="boa"; version="1.1.8-2"; sha256="04lhqk5qfvaz1jk90glr2yi5vq7cdy0w8m6g2lnzk359l9y41zhp"; depends=[]; }; bodenmiller = derive2 { name="bodenmiller"; version="0.1"; sha256="0gqrjscgq4qgk7yl32w0965yscc1py9klr49s8q8hkzyihlwzim2"; depends=[]; }; boilerpipeR = derive2 { name="boilerpipeR"; version="1.3"; sha256="0467bjqhdmi3p02fp0r7rgm00x9ry464f2hniav990qzsw8i16q6"; depends=[rJava]; }; - bold = derive2 { name="bold"; version="0.5.0"; sha256="0gdmb3zsspcp594d32yzqhdpw4dwg7a3pfm7kgbghz368yw662gl"; depends=[crul data_table jsonlite plyr reshape stringr tibble xml2]; }; - bomrang = derive2 { name="bomrang"; version="0.2.1"; sha256="1xivym3imf9gyp88yangyh0023sycy4n8iy578msikjk487iq0w9"; depends=[curl data_table dplyr foreign hoardr httr janitor jsonlite magrittr raster readr rgdal rvest tidyr xml2]; }; + bold = derive2 { name="bold"; version="0.8.0"; sha256="16w623k83xydgj2m0qyxc2s08226nvqrlfj242ix4lb51kghxy3j"; depends=[crul data_table jsonlite plyr reshape stringr tibble xml2]; }; + bomrang = derive2 { name="bomrang"; version="0.4.0"; sha256="16rc60pzphbxmijff5rk3vp8ara9vy1bk48m55drpqqdc3sbc0g3"; depends=[curl data_table dplyr foreign hoardr httr janitor jsonlite lubridate magrittr raster readr rgdal rvest tidyr xml2]; }; bookdown = derive2 { name="bookdown"; version="0.7"; sha256="1b3fw1f41zph5yw3kynb47aijq53vhaa6mnnvxly72zamyzdf95q"; depends=[htmltools knitr rmarkdown tinytex xfun yaml]; }; - bookdownplus = derive2 { name="bookdownplus"; version="1.3.2"; sha256="0vkivgjfmqy2xfs75w8ylkpgcvca294q61jrhbpg24vnll3c281n"; depends=[bookdown knitr yaml]; }; + bookdownplus = derive2 { name="bookdownplus"; version="1.5.2"; sha256="09h45h9dry7ask3pg15c7zc9pghd8rdcp1cnaqgcrs6q6jgscld4"; depends=[bookdown]; }; boostSeq = derive2 { name="boostSeq"; version="1.0"; sha256="0sikyzhn1i6f6n7jnk1kb82j0x72rj8g5cimp2qx3fxz33i0asx6"; depends=[genetics lpSolveAPI]; }; - boostmtree = derive2 { name="boostmtree"; version="1.2.1"; sha256="0k79zfkck1plcd51sk6i8n5qh7hpnhchkqqhjn460hf0rl2mcjab"; depends=[nlme randomForestSRC]; }; + boostmtree = derive2 { name="boostmtree"; version="1.3.0"; sha256="0q1lgjvbc15m2gygnmh63m0wy2c6x25iwrh9cbn0baq598hnr7j9"; depends=[nlme randomForestSRC]; }; boostr = derive2 { name="boostr"; version="1.0.0"; sha256="123ag8m042i1dhd4i5pqayqxbkfdj4z0kq2fyhxfy92a7550gib2"; depends=[foreach iterators stringr]; }; boot = derive2 { name="boot"; version="1.3-20"; sha256="0ai1qpm0p4z07xr0dvag8sdn9jrxcwanrsk9khzmww094jvr1jxd"; depends=[]; }; bootES = derive2 { name="bootES"; version="1.2"; sha256="0hcaw1v80zspdsy4wr464lmgq33807i2f6n2dc3r7qqwa80g4zz0"; depends=[boot]; }; @@ -4787,16 +4994,17 @@ in with self; { bootSVD = derive2 { name="bootSVD"; version="0.5"; sha256="14xwbrpqj3j1xpsppgjxpn9ggsns2n1kmni9vn30vgy68zwvs2wy"; depends=[ff]; }; bootStepAIC = derive2 { name="bootStepAIC"; version="1.2-0"; sha256="0p6v4zjsaj1p6c678010fazdh40lpv0rvhczd1halj8aic98avdx"; depends=[MASS]; }; bootcluster = derive2 { name="bootcluster"; version="0.1.0"; sha256="1mx08p0csz06mq55bdg4vgnqa9khdgqrz4jnm48c24pg8rpaj98b"; depends=[cluster flexclust fpc mclust plyr sets]; }; - bootnet = derive2 { name="bootnet"; version="1.0.1"; sha256="1r5kbcycdlb8g4zs5vsrmcxl20a6x2kj47ybz6h1s83rqiylxg1b"; depends=[abind corpcor dplyr ggplot2 gtools huge igraph IsingFit IsingSampler Matrix mgm mvtnorm parcor qgraph relaimpo tidyr]; }; + bootnet = derive2 { name="bootnet"; version="1.1.0"; sha256="12r9xbsixj8bxjgn1cn0y2zvxmcllmz15cyflf7vnhn8lrphx309"; depends=[abind BDgraph corpcor dplyr ggplot2 graphicalVAR gtools huge igraph IsingFit IsingSampler Matrix mgm mvtnorm NetworkToolbox parcor pbapply psych qgraph relaimpo tidyr]; }; bootruin = derive2 { name="bootruin"; version="1.2-4"; sha256="1gbvh99snchipf13kjhymcx60s2kni23y7lv8lhzd3d402grp68h"; depends=[]; }; bootsPLS = derive2 { name="bootsPLS"; version="1.1.2"; sha256="19ikz3l0qds25hgcxvhsvqy6jyshcdvnxw6774ifl9ylngxvlfh0"; depends=[mixOmics]; }; bootspecdens = derive2 { name="bootspecdens"; version="3.0"; sha256="0hnxhfsc3ac4153lrjlxan8xi4sg1glwb5947ps6pkkyhixm0kc1"; depends=[MASS]; }; bootstrap = derive2 { name="bootstrap"; version="2017.2"; sha256="08lmsy7k8wsgv89yc904c6fidcymr1ma2ry4fl0p69p21v4iiwa4"; depends=[]; }; boottol = derive2 { name="boottol"; version="2.0"; sha256="01dps9rifzrlfm4lvi7w99phfi87b7khx940kpsr4m9s168a2dzv"; depends=[boot plyr]; }; - boral = derive2 { name="boral"; version="1.6.1"; sha256="1336nfgr5ni42pkikknlrhiqfi6avyl54ik2173vaxkgxcrlypzz"; depends=[abind coda fishMod MASS mvtnorm R2jags]; }; + bor = derive2 { name="bor"; version="0.1.0"; sha256="1r5jacmin0cq9zipxa9nmp3jnh6wsddd4wnzw2n5sggnf24ryp8g"; depends=[]; }; + boral = derive2 { name="boral"; version="1.7"; sha256="0li7jdzgq2ffhrf0nly96syp72vv3c6rbcni19kk2wgyv16mjwcm"; depends=[abind coda fishMod MASS mvtnorm R2jags]; }; bossMaps = derive2 { name="bossMaps"; version="0.1.0"; sha256="0w4ks1xicvfm8ari4fr18wjm0qj2nxdsapl6lpfjz8l1id0y78cg"; depends=[doParallel foreach ggplot2 raster rgdal rgeos scales sp tidyr]; }; boussinesq = derive2 { name="boussinesq"; version="1.0.3"; sha256="1j1jarc3j5rby1wvj1raj779c1ka5w68z7v3q8xhzjcaccrjhzxk"; depends=[]; }; - boxcoxmix = derive2 { name="boxcoxmix"; version="0.20"; sha256="1s6mkybr88dkn9mandmfrd0j7r3zrfjqgrdfywv54lasl1gcijzk"; depends=[npmlreg qicharts statmod]; }; + boxcoxmix = derive2 { name="boxcoxmix"; version="0.21"; sha256="0pav4nksh1zbic11l38jyyq8i58hfvwzkp88ra6nny3jn2axzipl"; depends=[npmlreg qicharts statmod]; }; boxoffice = derive2 { name="boxoffice"; version="1.1.0"; sha256="08b897dp5cfv6f30k2pdvh8y5n1981msnjr6lfs4dzfc1i6y2zfy"; depends=[httr rvest]; }; boxplotdbl = derive2 { name="boxplotdbl"; version="1.3.0"; sha256="1y1b45q69sxbszd83s8ch10z4i55h34ixm8q7yxr7byx3px8y65n"; depends=[]; }; boxr = derive2 { name="boxr"; version="0.3.4"; sha256="0wx3x65rk1ma8bw5h4yskr7ii95ynkm7il22l1bj34kv9f4bfyj3"; depends=[assertthat bit64 digest dplyr httpuv httr mime rio stringr]; }; @@ -4814,6 +5022,7 @@ in with self; { brainKCCA = derive2 { name="brainKCCA"; version="0.1.0"; sha256="1ag3qahlba4h4126873hg2bbi6sr729mhiw22gjgr4g4jg6lhh09"; depends=[brainR CCA elasticnet kernlab knitr misc3d oro_nifti rgl]; }; brainR = derive2 { name="brainR"; version="1.5.1"; sha256="0ih4vwy445ciyyvf8snm42vg7rzzf6vn9qkbhj0yyd8sy88mgyss"; depends=[misc3d oro_nifti rgl]; }; brainwaver = derive2 { name="brainwaver"; version="1.6"; sha256="0r79dpd9bbbn34rm29512srzj3m29qgvbryvrp1mwv8mmcsh6ij6"; depends=[waveslim]; }; + brandwatchR = derive2 { name="brandwatchR"; version="0.3.0"; sha256="10bccsaswsq06wdrxqg71amzx5rabmgfi4n074y651r2c1pyy98w"; depends=[data_table httr jsonlite]; }; brant = derive2 { name="brant"; version="0.2-0"; sha256="1hdwdrdl6ad112zd7q248am3qk19alnj647nrk9xxxgd7s6a9pnb"; depends=[MASS Matrix]; }; brazilmaps = derive2 { name="brazilmaps"; version="0.1.0"; sha256="1nvd8x4m4m3966qph6390kqwpsrv7vy4yf6pam98xxkjbl9a41nf"; depends=[dplyr ggplot2 magrittr sf sp]; }; brea = derive2 { name="brea"; version="0.2.0"; sha256="0mb043fdhxrg9gyf4g55ydjx37j20394nvd4d0fmiym98lccyi04"; depends=[]; }; @@ -4822,41 +5031,41 @@ in with self; { breakaway = derive2 { name="breakaway"; version="3.0"; sha256="0y3h7gifv279z3x77jmr97c0i3vy58m5wsr8pa2vyn26m02rbkpc"; depends=[]; }; breakfast = derive2 { name="breakfast"; version="1.0.0"; sha256="0p0svsqphd5w99pf5c5jmak1xxl8md881lapa8aps9xr73m4x6lf"; depends=[plyr]; }; breakpoint = derive2 { name="breakpoint"; version="1.2"; sha256="004vi1qr7iib8ykg6sp7xzv0bb841h4vsz2x0cyrhkdp41frglx9"; depends=[doParallel foreach ggplot2 MASS msm]; }; - breathtestcore = derive2 { name="breathtestcore"; version="0.4.1"; sha256="1wd5csdkq9i78l2d9rgp2fp2sw81n0bgi0ssfd447rw6c67x4539"; depends=[assertthat broom dplyr ggfittext ggplot2 MASS multcomp nlme purrr readr readxl signal stringr tibble tidyr xml2]; }; - breathteststan = derive2 { name="breathteststan"; version="0.4.1"; sha256="0jmc3984827v656h5zk1rkpbyk56cziandsdz689brw85m01kn1l"; depends=[BH dplyr purrr Rcpp RcppEigen rstan StanHeaders stringr tibble tidyr]; }; + breathtestcore = derive2 { name="breathtestcore"; version="0.4.5"; sha256="121s88q4gfc576gixilgahhv0dqwzwa0k5drwh344vgi033x1nhm"; depends=[assertthat broom dplyr ggfittext ggplot2 MASS multcomp nlme purrr readr readxl signal stringr tibble tidyr xml2]; }; + breathteststan = derive2 { name="breathteststan"; version="0.4.6"; sha256="0mwrr65hkk2l3mq8fdddfnxd44av426v384gn7cx1sqdd2rbi7a7"; depends=[BH dplyr purrr Rcpp RcppEigen rstan rstantools StanHeaders stringr tibble tidyr]; }; brew = derive2 { name="brew"; version="1.0-6"; sha256="1vghazbcha8gvkwwcdagjvzx6yl8zm7kgr0i9wxr4jng06d1l3fp"; depends=[]; }; brglm = derive2 { name="brglm"; version="0.6.1"; sha256="17r3az6za98v2r06aak77kypdaqssc9wxcc6m6vb20y7xm8dp1mp"; depends=[profileModel]; }; brglm2 = derive2 { name="brglm2"; version="0.1.8"; sha256="017m7nlh29p271dhvx19l6042qfs48hqs947kjmpc7ykzv5461y3"; depends=[enrichwith lpSolveAPI MASS Matrix nnet]; }; bridgedist = derive2 { name="bridgedist"; version="0.1.0"; sha256="0hqkpwpi3nv6mfhljl65zcflf4wy72ag36hdam6s7kynfj41qz6w"; depends=[]; }; bridger2 = derive2 { name="bridger2"; version="0.1.0"; sha256="0clp42nnbvd01n65azdi2ghp0mfqwsipzdl2d30q04lcvfkdpxrf"; depends=[BSDA data_table ggplot2 outliers plotly shiny shinydashboard]; }; - bridgesampling = derive2 { name="bridgesampling"; version="0.4-0"; sha256="1gv2h2wgj1ym7qpmxmj5s3q2xsz217ijwdx70qnh4ijvacsvaxwm"; depends=[Brobdingnag coda Matrix mvtnorm scales stringr]; }; + bridgesampling = derive2 { name="bridgesampling"; version="0.6-0"; sha256="1526lsqhgjh0v8jb2sb7rw9jxj2kkbidsqapqp309a2f05bsfb8p"; depends=[Brobdingnag coda Matrix mvtnorm scales stringr]; }; briskaR = derive2 { name="briskaR"; version="0.1.2"; sha256="1y9sabj7pfgyvv6s3bbvrb0xhjhwc4pcfsfx847kqdajid92qx8w"; depends=[deldir fftwtools fields MASS mvtnorm pracma raster rgdal rgeos sp]; }; brlrmr = derive2 { name="brlrmr"; version="0.1.5"; sha256="14dnmh062fw11bm236ilaqs6ss4ywajvsk3sxj0zwqk2bjf7y7vh"; depends=[boot brglm MASS profileModel Rcpp]; }; brm = derive2 { name="brm"; version="1.0"; sha256="0h4kgig28hkqv1amadznc0n9256dx613rxbn8s8si11ygx79x2dd"; depends=[]; }; - brms = derive2 { name="brms"; version="2.3.1"; sha256="134qixmk9r5bq6zmbyrhzyrrd60ihn5m7nkvblj7im9n8gh415wl"; depends=[abind backports bayesplot bridgesampling coda ggplot2 loo Matrix matrixStats mgcv nleqslv nlme Rcpp rstan rstantools shinystan]; }; - brnn = derive2 { name="brnn"; version="0.6"; sha256="0q3f3cbl89hgpav7bn54s13cysgz8fi0zm8byc9rgz0sqkjrxval"; depends=[Formula]; }; - broman = derive2 { name="broman"; version="0.67-4"; sha256="1jv1543zq74zjdrmhkcrjwxhn9bmsmmwadd9rjnn18svnrbnlq0g"; depends=[assertthat ggplot2 jsonlite RPushbullet]; }; - broom = derive2 { name="broom"; version="0.4.5"; sha256="1mrrqqw1bmjf2v88ziqwb5y86g29h0a3rsx2jpw0hrzrzb8i5kcb"; depends=[dplyr nlme plyr psych reshape2 stringr tidyr]; }; + brms = derive2 { name="brms"; version="2.6.0"; sha256="0zahc6p5k6sji172a148j8bcz8bzg7wbdzmaard4wr07dxqpinhj"; depends=[abind backports bayesplot bridgesampling coda ggplot2 loo Matrix matrixStats mgcv nleqslv nlme Rcpp rstan rstantools shinystan]; }; + brnn = derive2 { name="brnn"; version="0.7"; sha256="1bfqr21szlpn1izjwlzih9j7f34x31zrapckk184rvynbsbgg7g6"; depends=[Formula]; }; + broman = derive2 { name="broman"; version="0.68-2"; sha256="0h6lrxrcjggrkv1dnbqsancjj69072nacaaazibl1v99rawanghi"; depends=[assertthat ggplot2 jsonlite RPushbullet]; }; + broom = derive2 { name="broom"; version="0.5.0"; sha256="1r3831vq0fd5sh5841xr844sghg88z7ws91hg4jgnzbbkxfjp4ag"; depends=[backports dplyr nlme purrr reshape2 stringr tibble tidyr]; }; + broom_mixed = derive2 { name="broom.mixed"; version="0.2.3"; sha256="0f25wjhvvc5rw5sc8ya9agx9y7sm3sq67jj3z5503kdgksk2d1br"; depends=[broom coda dplyr glmmTMB nlme plyr purrr reshape2 stringr tibble tidyr TMB]; }; brotli = derive2 { name="brotli"; version="1.2"; sha256="07rgdgxh9bvn0qavpclxmkglwyl6ndqasxcs6j12if698dkn976b"; depends=[]; }; brr = derive2 { name="brr"; version="1.0.0"; sha256="050ivnqcaxiyypd1sxfpy6ianhzzmvs6c77ga40g3440cvfigkgw"; depends=[gsl hypergeo pander stringr SuppDists TeachingDemos]; }; brranching = derive2 { name="brranching"; version="0.3.0"; sha256="1mpjcp4x3gcc38irflldv0szznp7jazdn62niwvifinzhq4k7pkb"; depends=[ape crul curl phytools taxize]; }; brt = derive2 { name="brt"; version="1.3.0"; sha256="13fn2mv66fys7w0xchh69sb6jggg5c2imk1psi3mlr1902m6ss5m"; depends=[ggplot2]; }; - bs4Dash = derive2 { name="bs4Dash"; version="0.1.0"; sha256="0gqh51rpmqg359pv3lqg221rw9xixvgksv1yldp6sdvy0zxpp8dx"; depends=[shiny]; }; + bs4Dash = derive2 { name="bs4Dash"; version="0.2.0"; sha256="0s893mkhkr0zvarbyzl9k5033rjxwr42k74sx2qwjgwh0indypfb"; depends=[htmltools shiny]; }; bsam = derive2 { name="bsam"; version="1.1.2"; sha256="1m2lpqm2i4i35hzr1iylrb8skx8rsys3w542xjyqw030bs7b1rdk"; depends=[coda dplyr ggplot2 gridExtra lubridate msm mvtnorm rjags rworldxtra sp tibble]; }; bsamGP = derive2 { name="bsamGP"; version="1.2.1"; sha256="0b4a6ll11cykqq05ys1b0y9gdhbw6y60hjclz678vy5w8jia7a1m"; depends=[ggplot2 gridExtra MASS]; }; bsearchtools = derive2 { name="bsearchtools"; version="0.0.61"; sha256="11fqz8kdhqpc3jq34vgv3frzawgsl5y0s83rb2p54yb5yhd3p68w"; depends=[Rcpp]; }; bshazard = derive2 { name="bshazard"; version="1.1"; sha256="1kidypyqlilf794mksjvhja8bmnd9hdhz91ywy0mcddgc6wbar4h"; depends=[Epi survival]; }; bspec = derive2 { name="bspec"; version="1.5"; sha256="0jynvir7z4q1vrvhdn6wijdrjfrkk4544nlawabw2fnfxss91a91"; depends=[]; }; - bsplinePsd = derive2 { name="bsplinePsd"; version="0.5.0"; sha256="1ddvkn182r48fbjqkiskb94afy942bnl953n0cghza4wkbkdfprd"; depends=[Rcpp]; }; + bsplinePsd = derive2 { name="bsplinePsd"; version="0.6.0"; sha256="0f785l02hiq3f7anxqhm09f7lrqgkkqhly7f1x78cxm22hvrqyhg"; depends=[Rcpp]; }; bsplus = derive2 { name="bsplus"; version="0.1.1"; sha256="0s3407z48b7sdbkjkqcjk2j1wvs0z7chvdjzphil83l0vp3j5x0s"; depends=[glue htmltools lubridate magrittr purrr rmarkdown stringr]; }; bspmma = derive2 { name="bspmma"; version="0.1-1"; sha256="0bd6221rrbxjvabf1lqr9nl9s0qwav47gc56sxdw32pd99j9x5a9"; depends=[]; }; bssm = derive2 { name="bssm"; version="0.1.5"; sha256="07bhngqwm2qknsk9910273wgkl1f3c564ab1p90kvyi8syc64mqg"; depends=[BH coda diagis ggplot2 ramcmc Rcpp RcppArmadillo sitmo]; }; bssn = derive2 { name="bssn"; version="0.7"; sha256="1g2xhb7bqapwd5zbc4bl4h1fskd7k6gd0rz74hnydiiwxrwiihf6"; depends=[sn]; }; - bst = derive2 { name="bst"; version="0.3-14"; sha256="02rnnv3f89329kw81a1v88wjzrfjshqjijw5hp3zyydcsfa3j088"; depends=[doParallel foreach gbm rpart]; }; + bst = derive2 { name="bst"; version="0.3-15"; sha256="02378s18g0asmx00rghmqm5gb4dml530aln8r141f6wxgn9711fh"; depends=[doParallel foreach gbm rpart]; }; bsts = derive2 { name="bsts"; version="0.8.0"; sha256="06v8x2wgasbh00vvwn859y6rqp7z5ib43vvhh9qdkkrmdz4gw6sr"; depends=[BH Boom BoomSpikeSlab xts zoo]; }; btb = derive2 { name="btb"; version="0.1.30"; sha256="1f94zzpg3q6ldd436cv1wqpfbpw5f706073wk38a4dkg57dwrbgi"; depends=[BH Rcpp RcppArmadillo RcppParallel sf sp]; }; - btergm = derive2 { name="btergm"; version="1.9.1"; sha256="1bvq6v35fpfd4vhbq1c5jb4gg3iyfflbv0n89gv4hzm80xx50rs9"; depends=[boot coda ergm ggplot2 igraph Matrix network ROCR RSiena sna speedglm statnet statnet_common texreg xergm_common]; }; - btf = derive2 { name="btf"; version="1.2"; sha256="110p7rk43g48yrnr6c9xkyzsh3kqdywsvi23dav89hl7sxahrf75"; depends=[coda Matrix Rcpp RcppEigen]; }; + btergm = derive2 { name="btergm"; version="1.9.3"; sha256="0nailhw4n9rqqv1i2l41qz4gx0mr7viycdmd4kc00gm3nk4721gp"; depends=[boot coda ergm ggplot2 igraph Matrix network ROCR RSiena sna speedglm texreg xergm_common]; }; bucky = derive2 { name="bucky"; version="1.0.4"; sha256="1irzv1ib40h0ijlpawp0lac572nik3x77xcdi1vyncvinc9pcmr8"; depends=[lmtest sandwich]; }; bujar = derive2 { name="bujar"; version="0.2-3"; sha256="0gc5wrnhark1gawl4qqjh179xaxjal5r7qq4ilx30yn3qhzrqdaz"; depends=[bst earth elasticnet gbm mboost mda modeltools mpath rms]; }; bulletr = derive2 { name="bulletr"; version="0.1"; sha256="181rnrp62almf08gr41qnrnq8qnbqraqdvj4zixdh8fachsq2imp"; depends=[dplyr ggplot2 plotly plyr reshape2 robustbase smoother xml2 zoo]; }; @@ -4866,26 +5075,26 @@ in with self; { bupaR = derive2 { name="bupaR"; version="0.4.1"; sha256="0gf9qzk826zq15w8fl9skg1kpmz0s87k5l1rs45ggdwg49q5pq48"; depends=[data_table dplyr eventdataR forcats glue magrittr miniUI purrr rlang shiny tidyr]; }; burnr = derive2 { name="burnr"; version="0.2.2"; sha256="1b5ys0jm2dmiz1jd5f3907dhv44wh60kmfdfhj3fzx8rk7zllm06"; depends=[ggplot2 MASS plyr reshape2]; }; bursts = derive2 { name="bursts"; version="1.0-1"; sha256="172g09d1vmwl83xs6gr4gfblqmx3apvblpzdr5d7fcw1ybsx0kj6"; depends=[]; }; - bustt = derive2 { name="bustt"; version="0.1.0"; sha256="16y1si8bk7ar6h82bb8l3xq8k2azlxdz4aa56kh33nrajvbfc1fg"; depends=[dplyr lubridate rlang tibble tidyr]; }; bvarsv = derive2 { name="bvarsv"; version="1.1"; sha256="1bv4fbbi8bn7sqqpjlf8w5jpgydjr15wv5v9940wc42yk792yjrx"; depends=[Rcpp RcppArmadillo]; }; bvenn = derive2 { name="bvenn"; version="0.1"; sha256="1xrya49w5bd2b7plfxpqla60b2828rkm0rjmc4qnqzvrahsbal0y"; depends=[]; }; bvls = derive2 { name="bvls"; version="1.4"; sha256="18aaf7kk5mks3a59wwqhm1ckpn6s704l9m5nzy0x5iw0s98ijbm2"; depends=[]; }; bvpSolve = derive2 { name="bvpSolve"; version="1.3.3"; sha256="1q5sh3kj1c07zq7mx8sh4ggp1fvwh86394qrc3ildj4wrbakmzib"; depends=[deSolve rootSolve]; }; - bw = derive2 { name="bw"; version="1.0.0"; sha256="169mqd0vj0ia0zrfnv3g5gm9vzpj5mrxrwhfv5kh5a720inlcwj1"; depends=[ggplot2 gridExtra Rcpp reshape2 survey]; }; bytescircle = derive2 { name="bytescircle"; version="1.1"; sha256="0c83d37kijcvr00pc4qqdci14cpbg6988izyjfjk1yliavyc6mwf"; depends=[]; }; c060 = derive2 { name="c060"; version="0.2-4"; sha256="1yzy0p6041rygqfwzb8dpyc7jq12javmhlvdcmmc7p59bbk7wv3j"; depends=[glmnet lattice mlegp penalizedSVM peperr survival tgp]; }; - c212 = derive2 { name="c212"; version="0.93"; sha256="10gwkr2w05bi27zwvspm3g31a1dpqbh1i52vyrfaamqkxypa11nh"; depends=[coda]; }; + c14bazAAR = derive2 { name="c14bazAAR"; version="1.0.2"; sha256="03siiadhj8wp80jhm99lw7xb1p24yk9ycx2kp085a7xj82hl22jj"; depends=[crayon data_table dplyr magrittr pbapply RCurl rlang tibble tidyr]; }; + c212 = derive2 { name="c212"; version="0.94"; sha256="04vd0yzilzq078s8498085bryhhi0h19v0xykd1pzn680flm5lx8"; depends=[coda]; }; c2c = derive2 { name="c2c"; version="0.1.0"; sha256="149np512wjnlr9glmqxpiamf6c31v0bh6ym95jpdhk0iw3ic9kvh"; depends=[]; }; c3 = derive2 { name="c3"; version="0.2.0"; sha256="1af4lrgck1bff8jjp9vwyw2rpq54d1ng13rpcqlf58asdja29s9h"; depends=[data_table dplyr htmlwidgets jsonlite lazyeval viridis]; }; c3net = derive2 { name="c3net"; version="1.1.1"; sha256="0m4nvrs41kmlakc6m203zlncqwgj94wns8kzcb31xngjcacmcq42"; depends=[igraph]; }; - cAIC4 = derive2 { name="cAIC4"; version="0.4"; sha256="1lv2nawrjmb89nvp308irmbnagzjxp78l6csmql6nkwcbyhwf9rh"; depends=[lme4 Matrix]; }; + cAIC4 = derive2 { name="cAIC4"; version="0.5"; sha256="1xbij45ds0f64nj8y50dpsxvngxm004bcbs31zwicqlhf3mabf8y"; depends=[lme4 Matrix]; }; cIRT = derive2 { name="cIRT"; version="1.2.1"; sha256="1i43pqlyzykyd1a6abg1yi7ai9ay7d2jkvnw1sa4c6q07jk56d89"; depends=[Rcpp RcppArmadillo]; }; - cOde = derive2 { name="cOde"; version="0.3"; sha256="1r49q7qansn86wrxbhxqnn1dccd9av4lh4h5pn9kk42pls9q60nf"; depends=[Rcpp RcppArmadillo]; }; - cRegulome = derive2 { name="cRegulome"; version="0.1.1"; sha256="0rhi4f1wkl03vh9m6hsba08cfvqjfn99xyxsykv625bgxra817bd"; depends=[AnnotationDbi clusterProfiler DBI dplyr ggplot2 ggridges httr magrittr org_Hs_eg_db purrr R_utils reshape2 RSQLite tidyr UpSetR VennDiagram]; }; - ca = derive2 { name="ca"; version="0.70"; sha256="0730c7nk49hz0k1i5nnhq2j3wbhrlhr1qvb50mk8vmqkbhb1pz1l"; depends=[]; }; + cOde = derive2 { name="cOde"; version="0.4.1"; sha256="1hvanmbnmkrly2s3c57r2xc0w56a4jxspc15ncfzdx94k6mvnhxq"; depends=[Rcpp RcppArmadillo]; }; + cRegulome = derive2 { name="cRegulome"; version="0.2.0"; sha256="1i5f5c2mc66gjh5dh883x9ghpnam6zva8s6y5vdy6wyih0x2r9yn"; depends=[DBI ggplot2 ggridges httr igraph R_utils RSQLite UpSetR VennDiagram]; }; + ca = derive2 { name="ca"; version="0.71"; sha256="1ywqvj0rc9ss7yim4x09yf6l80xz4y6ggl56m0c1hc9x6wxna7h2"; depends=[]; }; + caMST = derive2 { name="caMST"; version="0.1.0"; sha256="1xb8ka2r729sqwxhxh5qj4girh0va0faqjv1jsyn3hlbijcz78jj"; depends=[catR mstR]; }; caRamel = derive2 { name="caRamel"; version="1.0"; sha256="0al4yk77a4bh8rjdpl841bnnjvs0sjyxqswqwik1n6y0bfr8f7pl"; depends=[geometry]; }; caRpools = derive2 { name="caRpools"; version="0.83"; sha256="10m7fw1zfr9i6v2qg235diwf3fmfr88incxnqpvnhmqcn082mxrp"; depends=[biomaRt DESeq2 rmarkdown scatterplot3d seqinr sm VennDiagram xlsx]; }; - caTools = derive2 { name="caTools"; version="1.17.1"; sha256="1x4szsn2qmbzpyjfdaiz2q7jwhap2gky9wq0riah74q0pzz76ank"; depends=[bitops]; }; + caTools = derive2 { name="caTools"; version="1.17.1.1"; sha256="01hccp05gz25vhz9nnxv1c91lrxlr7drcw9xf124gggifxf2qgnm"; depends=[bitops]; }; cabootcrs = derive2 { name="cabootcrs"; version="1.0"; sha256="0a6y04jq837k1pk8b9nhgz7rima7s8jid6vdjyfvrqshgaiabg1q"; depends=[]; }; cacIRT = derive2 { name="cacIRT"; version="1.4"; sha256="145j6isqa8yj2nvlqkxagd076zs10ng3n44khi5p4jj77fjc8gh6"; depends=[]; }; caesar = derive2 { name="caesar"; version="0.1.0"; sha256="1l0z64fsifx37j2h61kzygbwr3z3cncn48znrpb5cq10ma42igqf"; depends=[binhf]; }; @@ -4894,28 +5103,32 @@ in with self; { calACS = derive2 { name="calACS"; version="2.2.2"; sha256="0a53k2rzyjksb0ypr5zrask4a6mgiyrqx0l2z3lm218y8pk2jf1w"; depends=[]; }; calibrar = derive2 { name="calibrar"; version="0.2.0"; sha256="1544bc5rhhc6d1mky7ngza00wwh63q07dkbzlwfgyavly8m9cplb"; depends=[cmaes foreach optimx]; }; calibrate = derive2 { name="calibrate"; version="1.7.2"; sha256="010nb1nb9y7zhw2k6d2i2drwy5brp7b83mjj2w7i3wjp9xb6l1kq"; depends=[MASS]; }; + calibrateBinary = derive2 { name="calibrateBinary"; version="0.1"; sha256="1k6sl4bg05piyczpk6wsva914gcmy8viyz4423gx9i6ddflb7xdb"; depends=[gelnet GPfit kernlab randtoolbox]; }; calibrator = derive2 { name="calibrator"; version="1.2-6"; sha256="1arprrqmczbhc1gl85fh37cwpcky8vvqdh6zfza3hy21pn21i4kh"; depends=[cubature emulator]; }; - callr = derive2 { name="callr"; version="2.0.4"; sha256="1053qqq632z94pqq2v5dynjpgyv1b1c8zvidmcllw7zn8zha8gqf"; depends=[processx R6]; }; + callr = derive2 { name="callr"; version="3.0.0"; sha256="1rxbxy6kn7dj90z9hpppr9cnpvnxzknba2dwrdp0lrk5dh462qz3"; depends=[base64enc processx R6]; }; calmate = derive2 { name="calmate"; version="0.12.1"; sha256="07sjbq7bcrhal52pdzsb5pfmk6a8a44wg8xn79sv4y5v74c5xaqz"; depends=[aroma_core MASS matrixStats R_filesets R_methodsS3 R_oo R_utils]; }; + calpassapi = derive2 { name="calpassapi"; version="0.0.2"; sha256="0i81ffdfw3m15cfbag3l9s245dyhapqhy7adb3228vam3qp3n59b"; depends=[digest dplyr httr jsonlite stringr]; }; camsRad = derive2 { name="camsRad"; version="0.3.0"; sha256="06gar6qan1ka01ngjvbpcv649yvfga697mplwn1x6qnfr4ngb7cs"; depends=[httr xml2]; }; - camtrapR = derive2 { name="camtrapR"; version="0.99.9"; sha256="1kzy90mwmpn2yb47xp5b8s3lj8lbkg8hfw44pwfb54gqf7wi2lkm"; depends=[overlap rgdal ritis secr sp taxize]; }; + camtrapR = derive2 { name="camtrapR"; version="1.0"; sha256="1raxxki2xkmb7mjlfsxn2fr1dvwc86n88cbkk08bwjzsizrvsz0z"; depends=[overlap rgdal ritis secr sp taxize]; }; cancensus = derive2 { name="cancensus"; version="0.1.7"; sha256="0v3wbmdqg36zn30kgj5xbndz69x3vvr0i6ag57gz8sbbgc4nyqbr"; depends=[digest dplyr httr jsonlite rlang]; }; cancerGI = derive2 { name="cancerGI"; version="1.0.0"; sha256="1chkcyf9m98gbn6b3vmb1baw7kii4g5vxvg2xfi7i6wwdn8sqr65"; depends=[igraph qvalue reshape2 survival systemfit]; }; cancerTiming = derive2 { name="cancerTiming"; version="3.1.8"; sha256="1sfi8q2f5ag7iak0sf9pmqncb89w3gnxdiwjwpivkwhr28ais4mq"; depends=[gplots LearnBayes]; }; candisc = derive2 { name="candisc"; version="0.8-0"; sha256="0hq5bwvq791rhff2c29xdjbbkcyydii1lbsy05c1fapyn88ir0mi"; depends=[car heplots]; }; canprot = derive2 { name="canprot"; version="0.1.1"; sha256="14g7wl4p9bgwf5jm48mp676z0pwlsd2xgxjwzixri7mxxh0ivfh1"; depends=[CHNOSZ xtable]; }; - canvasXpress = derive2 { name="canvasXpress"; version="1.19.0"; sha256="1cxfadvrm3gkrdfibwi1b7kqlc3hczyc0g72v5gkgc9hssb8j46i"; depends=[htmlwidgets]; }; + canvasXpress = derive2 { name="canvasXpress"; version="1.20.5"; sha256="00hf905ypaclxhf11fkg5kdfllq9ljdziw8xbyj9lw7kq3xn5h22"; depends=[htmlwidgets]; }; + cap = derive2 { name="cap"; version="1.0"; sha256="1pv8hskxjbp589dn7rx80yaa1ld76x1w37bss2fyrys1p3qr78aa"; depends=[MASS multigroup]; }; cape = derive2 { name="cape"; version="2.0.2"; sha256="0ngm9scd3f2zcy7gy0lqk05cgbfrhhcss3mj5g6bj0byhgwd7msn"; depends=[corpcor doParallel evd fdrtool foreach HardyWeinberg igraph Matrix qpcR RColorBrewer regress shape]; }; caper = derive2 { name="caper"; version="1.0.1"; sha256="0md0sngj7wsv2d4d7fmyyz9qqismk3ps9l3qk1blqz1yi19pq124"; depends=[ape MASS mvtnorm]; }; - capm = derive2 { name="capm"; version="0.11.0"; sha256="1yw7h1r5m4md8yv0fn1j4wxvhwybifqyvrn8ip3fl32kxbwsmnvz"; depends=[deSolve FME ggplot2 maptools reshape2 rgdal shiny sp survey]; }; + capm = derive2 { name="capm"; version="0.13.5"; sha256="01jl1xqlycy726jbkkq39n3j8yia7i5x2lmkg285c4zlp350vnbg"; depends=[circlize deSolve dplyr FME ggplot2 magrittr sf survey tidyr]; }; capn = derive2 { name="capn"; version="1.0.0"; sha256="14vfk00xyx0az3whmxjpcv1785lf0gx81w7qc54i3wcfp3i22kcr"; depends=[]; }; captioner = derive2 { name="captioner"; version="2.2.3"; sha256="0xg72pmgm84f0v45phfwxpsslhf12nhn1swmrj1yifj7g9sjvybj"; depends=[]; }; captr = derive2 { name="captr"; version="0.3.0"; sha256="13j2nq9hm37g4h5fjdpz7kix0sqajdd7zssjfgil06ixfmnsijkx"; depends=[curl jsonlite]; }; capushe = derive2 { name="capushe"; version="1.1.1"; sha256="1aa76ir1kp67hiz7dr60azyc71yzslshyc640fjh0fpw0sp5kwbc"; depends=[MASS]; }; capwire = derive2 { name="capwire"; version="1.1.4"; sha256="18a3dnbgr55yjdk6pd7agmb48lsiqjpd7fm64dr1si6rpgpl4i9c"; depends=[]; }; - car = derive2 { name="car"; version="3.0-0"; sha256="1ks2jaav8lbxhzw56vpbnysjk3pvpmqh6avd574k0bha1226k81h"; depends=[abind carData lme4 maptools MASS mgcv nlme nnet pbkrtest quantreg rio]; }; - carData = derive2 { name="carData"; version="3.0-1"; sha256="193pdwgw6gk19v7swk1kwphg3vqdmpsgi555g9nyz93sa39j7r8j"; depends=[]; }; + car = derive2 { name="car"; version="3.0-2"; sha256="0l3wyc9ia0ypcbap2p39slazfpbl84mjzydqvpsywrzdiyxajnfz"; depends=[abind carData lme4 maptools MASS mgcv nlme nnet pbkrtest quantreg rio]; }; + carData = derive2 { name="carData"; version="3.0-2"; sha256="152lfgaspgx6x2wzdb5p3zv6r87a0d2pg10h6fjmdr613kzlwp1v"; depends=[]; }; carSurv = derive2 { name="carSurv"; version="1.0.0"; sha256="0wv7lp10i4sdfqyizg77ghblp3pcp7wzhs946sm0wl6w00krav9j"; depends=[corpcor fdrtool mboost Rcpp survival]; }; + carbonate = derive2 { name="carbonate"; version="0.1.0"; sha256="0p1l84vmcn1jiwnw6s9ysbbag2zxb2qiwx2kb4ghkxrhycid1p9n"; depends=[clipr httr magick R6 RSelenium rtweet wdman yaml]; }; carcass = derive2 { name="carcass"; version="1.6"; sha256="0nhp35nxjqqmy15rf9vc0qyymy7d0v8mc84570b9nc62g5xac8xy"; depends=[arm expm lme4 MASS survival]; }; cardidates = derive2 { name="cardidates"; version="0.4.8"; sha256="1mfd5sgzswhs9rln2bgxx8c54z69xp8l5dfmx7jfh8jl43qkzpjf"; depends=[boot lattice pastecs]; }; cardioModel = derive2 { name="cardioModel"; version="1.4"; sha256="1a2nvn4a4zc89pb01m20pxqgbj0ypzzvx9w2vfzwly1kzkhvc9hr"; depends=[lubridate nlme]; }; @@ -4927,16 +5140,18 @@ in with self; { caribou = derive2 { name="caribou"; version="1.1"; sha256="0ibl3jhvsgjfcva0113z0di9n5n30bs90yz0scckfv1c0pjhn4xd"; depends=[]; }; caroline = derive2 { name="caroline"; version="0.7.6"; sha256="1afxxbrd7w628l4pxdmvwbs7mbgxlhnfq3nxk2s93w47gn7r9fp7"; depends=[]; }; carpenter = derive2 { name="carpenter"; version="0.2.1"; sha256="1f6g85qgd53wzha8kfq8x29lb5wilgxm6bj49znzd1qj03nlnpna"; depends=[dplyr lazyeval magrittr pander tidyr]; }; + carrier = derive2 { name="carrier"; version="0.1.0"; sha256="0bqnwnnjqjk9q0lxq6kkz9s75ss10lfyyywyyi24m8wppxpw1vqc"; depends=[pryr rlang]; }; cartogram = derive2 { name="cartogram"; version="0.1.0"; sha256="01ixcn6fy38r6nazch9dqlg19znssrx4d4fahvx9z7f4clnh0k80"; depends=[packcircles rgeos sf sp]; }; - cartography = derive2 { name="cartography"; version="2.1.1"; sha256="0dd1qps1iw9cbipy1wamyb1f2ia9bcwdb1v7jaa58ac2x1y4m9gr"; depends=[classInt raster Rcpp rgeos rosm sf sp]; }; + cartography = derive2 { name="cartography"; version="2.1.2"; sha256="0rh97byxrmnd8wkq190zjql41zkvhzmhjg1s0nscrwjassmp4sqp"; depends=[classInt raster Rcpp rgeos rosm sf sp]; }; + cartools = derive2 { name="cartools"; version="0.1.0"; sha256="0gc5502373f0c2m2rh6awvyfqrg1wx1f341dm2byk9znba887lgs"; depends=[animation devtools dplyr gapminder ggplot2 knitr rlist rmarkdown roxygen2 sde shiny tidyverse usethis]; }; carx = derive2 { name="carx"; version="0.7.1"; sha256="1qyqsj6pfzzqyaj6076zvgcimhl4cll6sxfb6aigm02rwfkq5gvh"; depends=[matrixStats mvtnorm nlme tmvtnorm xts zoo]; }; caschrono = derive2 { name="caschrono"; version="2.0"; sha256="091zqin2cr9p50zmifrb52dxy10zflm7f0lr9nissy589qjdd0gk"; depends=[Hmisc zoo]; }; caseMatch = derive2 { name="caseMatch"; version="1.0.7"; sha256="1xd7mlnknjrilxcp0w0b36aaiql6jdqgyin1823r2x8vl9r4aqns"; depends=[]; }; casebase = derive2 { name="casebase"; version="0.1.0"; sha256="0216qzyxv44cl9f806lal9lx4n0zzr9csx8ggyjva04h5iiqrq6w"; depends=[data_table ggplot2 survival VGAM]; }; - castor = derive2 { name="castor"; version="1.3.3"; sha256="0n7d4225g28c3i4w4n9bdd8zz91kr80vvnajpn5433db71bqrrv8"; depends=[naturalsort Rcpp]; }; + castor = derive2 { name="castor"; version="1.3.4"; sha256="0ghbxh9n8189wzif5v941iax775yq0n7rkhw98wx3wklwn75ijv4"; depends=[naturalsort Rcpp]; }; cat = derive2 { name="cat"; version="0.0-6.5"; sha256="1gv7chqp6kccipkrxjwhsa7yizizsmk4pj8672rgjmpfcc64pqfm"; depends=[]; }; catIrt = derive2 { name="catIrt"; version="0.5-0"; sha256="09010z1q96nbnpys6mybspaqy57lvgd2cvwgnfijzgx3kl87pwnl"; depends=[numDeriv]; }; - catR = derive2 { name="catR"; version="3.15"; sha256="1c258x8s1j4z0p1kdg7kr4ligir8q2xdcxmk2cqshxfi0p0irajz"; depends=[]; }; + catR = derive2 { name="catR"; version="3.16"; sha256="1w39dxfzqk065v64qzmfamx8p1njsv13a461s6clagbqmhysmzbx"; depends=[]; }; catSurv = derive2 { name="catSurv"; version="1.0.3"; sha256="1qjmjdmc81inim5kpwh4k2r3cffmkyp2wpcqqzv731hciqrad8a8"; depends=[BH ltm Rcpp RcppArmadillo RcppGSL RcppParallel]; }; catch = derive2 { name="catch"; version="1.0"; sha256="16gdjrmlsnpyc38fihggj6c7wpgpmf4phcwrimnncdhwlk038yn8"; depends=[MASS Matrix tensr]; }; catcont = derive2 { name="catcont"; version="0.5.0"; sha256="0ix6ipm3nn9aq5vxirjga2kwwfnxn4v8ggfjlg5v9027v2r8rb96"; depends=[dplyr]; }; @@ -4945,7 +5160,7 @@ in with self; { cate = derive2 { name="cate"; version="1.0.4"; sha256="0qck6675xm5xbw440m1b6n38wjwk7izx3s0zpxbmhc9wh12c5prk"; depends=[corpcor esaBcv leapp MASS ruv sva]; }; catenary = derive2 { name="catenary"; version="1.1.2"; sha256="1n64kq3lkaf00a2mghs67hnxvi4dp6g12pwifyx0bd418wkw9wf3"; depends=[boot broom dplyr ggplot2 tidyverse]; }; cati = derive2 { name="cati"; version="0.99.2"; sha256="1h8x73sfjdz45zpcrv80nq8l9i1gldw0vmdgn2lhqrjaxz4zn01l"; depends=[ade4 ape e1071 FD geometry hypervolume nlme rasterVis vegan]; }; - catlearn = derive2 { name="catlearn"; version="0.5"; sha256="12sl1jlnn8669via3fbslbqs3f34andwsizkllpiw0b6k9z2yid6"; depends=[doParallel foreach Rcpp]; }; + catlearn = derive2 { name="catlearn"; version="0.6"; sha256="1dh6svlnvxq1a8sv72wdwsgzd72kgaqgjbbbm3nw5qpycy5lqr8x"; depends=[doParallel dplyr foreach Rcpp tidyr]; }; catmap = derive2 { name="catmap"; version="1.6.4"; sha256="18449qh10jxfi8p49gmbnib5y013nfdgdblbs4n0mfs0nnzb10sx"; depends=[forestplot metafor]; }; catnet = derive2 { name="catnet"; version="1.15.3"; sha256="1dgqrn1lz57pwb5pca0mlvcmw9piy9xgf6fs0y2lsy4qxa9k0plk"; depends=[]; }; catspec = derive2 { name="catspec"; version="0.97"; sha256="1crry0vg2ijahkq9msbkqknljx6vnx2m88bmy34p9vb170g9dbs1"; depends=[]; }; @@ -4954,7 +5169,7 @@ in with self; { causaldrf = derive2 { name="causaldrf"; version="0.3"; sha256="16gqx8b8alwm8a4lm69qamnqr3bg2qbz0d6q4lyqyrwsk12grid6"; depends=[mgcv survey]; }; causaleffect = derive2 { name="causaleffect"; version="1.3.8"; sha256="1z7dnfq469wa263xcxfixrn5q4vcd6xl62lahnc5gc8wzvxnxz8g"; depends=[ggm igraph XML]; }; causalsens = derive2 { name="causalsens"; version="0.1.2"; sha256="1xy8nybflbw6hymc15mmz27ic6hcq89wryb8q6d4zi216lwv2nww"; depends=[]; }; - causalweight = derive2 { name="causalweight"; version="0.1.0"; sha256="1hig92w18vsyfpv1kvgymk37ik7rw7ql80p886b3s6vwdz8z0r3j"; depends=[mvtnorm np]; }; + causalweight = derive2 { name="causalweight"; version="0.1.1"; sha256="0np9dzl5nq4rkxy8br1pvgkl5sxmihwgjxn0b1gn5cisiv6q2106"; depends=[mvtnorm np]; }; cba = derive2 { name="cba"; version="0.2-19"; sha256="0nyssc7j5rkv1gcgx4cg31hwc37wd5k3yn9s2k22ffxlnrknss2l"; depends=[proxy]; }; cbanalysis = derive2 { name="cbanalysis"; version="0.2.0"; sha256="0h0h8krlb6rckjpcw0jbbr8pcy3jm0cszimbm56l0ca668kiix06"; depends=[]; }; cbar = derive2 { name="cbar"; version="0.1.3"; sha256="1jy52qnpjvszdd8xviv3vr00ds6bah73q0mhd4kixf68jafnxd35"; depends=[Boom bsts dplyr ggplot2 magrittr]; }; @@ -4970,13 +5185,13 @@ in with self; { cccrm = derive2 { name="cccrm"; version="1.2.1"; sha256="180hzxm4z91hh008lysq1f0zky7qngg5z1laa1c119g4rqqcdskl"; depends=[gdata nlme]; }; ccda = derive2 { name="ccda"; version="1.1"; sha256="0ya9x1b41l0pjyyfdswjyip0c2v8z7gncbj7cdz0486ad75229x7"; depends=[MASS]; }; ccdrAlgorithm = derive2 { name="ccdrAlgorithm"; version="0.0.5"; sha256="171k70p4qyasr385ma3cvcga2b4nbz2dfry78wqx5yb1aa6wwcyc"; depends=[Rcpp sparsebnUtils]; }; - ccfa = derive2 { name="ccfa"; version="1.0.0"; sha256="0hhrcckiig1qfj7qb04jdmm7bwk9a17y6fn7ldxbmmw8546ad7md"; depends=[BMisc formula_tools ggplot2 pbapply quantreg TempleMetrics tidyr]; }; + ccfa = derive2 { name="ccfa"; version="1.1.0"; sha256="1paxk1jkkl8yy71h8zqw7kmhy5yz93sp7z9mpnckwyxmsbs58ps8"; depends=[BMisc doParallel foreach formula_tools ggplot2 pbapply quantreg TempleMetrics tidyr]; }; ccgarch = derive2 { name="ccgarch"; version="0.2.3"; sha256="0angffla3sk9i86v6bbsav95fp3mz5yvq7qfv0fx2v0nd2cx116w"; depends=[]; }; cchs = derive2 { name="cchs"; version="0.4.0"; sha256="1dahiyn3rj65w56hmhqdxvxh7vkjy5rxlkp1l59aq5iba21ldsyj"; depends=[survival]; }; cclust = derive2 { name="cclust"; version="0.6-21"; sha256="1n5hh0017bcq8ck52qq89jm9zgdfpmiksrypsnv2vvhk3nr0s91c"; depends=[]; }; ccmm = derive2 { name="ccmm"; version="1.0"; sha256="0855nr74xxpy7in2vrw15g8pv7nm1374irc1c5hikr5hadk5pf8v"; depends=[MASS]; }; cctools = derive2 { name="cctools"; version="0.1.1"; sha256="1baqijxg75wr90y38d5g1gg8jmpz8ji7zv51wp9n1knif27rg348"; depends=[qrng Rcpp RcppArmadillo]; }; - cdata = derive2 { name="cdata"; version="0.7.1"; sha256="0hijmhpcz5r4sg8r4fn5h5lzklfwyzjh3dr25bwjc82jdcysjplg"; depends=[wrapr]; }; + cdata = derive2 { name="cdata"; version="1.0.3"; sha256="0vakyz0asb0fw86lfd1vcc5px45s1xa9f10san0kvlv1qs7agmdz"; depends=[rquery wrapr]; }; cdb = derive2 { name="cdb"; version="0.0.1"; sha256="1rdb4lacjcw67apdyiv7cl1xvv9d1mrzck1qk605n6794k7wf2ys"; depends=[bitops]; }; cdcfluview = derive2 { name="cdcfluview"; version="0.7.0"; sha256="00yc3q28y20l2ppqxy6h53p9fvwhvpkc8m7csmp2lizqh787i2cc"; depends=[dplyr httr jsonlite MMWRweek purrr readr sf units xml2]; }; cdcsis = derive2 { name="cdcsis"; version="1.0"; sha256="1fxdsaqpjhpffn2fxddfcrx8wxwyvfws6rxkpp57g25980xiyzkd"; depends=[ks]; }; @@ -5000,7 +5215,7 @@ in with self; { censorcopula = derive2 { name="censorcopula"; version="2.0"; sha256="16pk4xlpliif02qznrhvl8qmrr6k4kknygqxcm83nsjxy6dcyga8"; depends=[copula]; }; census = derive2 { name="census"; version="0.2.0"; sha256="02qlmifppnfxw7bzh0zngih8z8qz0sxpsi38h7bv324vxx94gvz2"; depends=[ggmap RCurl]; }; censusGeography = derive2 { name="censusGeography"; version="0.1.0"; sha256="1ncgd05ml571g3vy1g4p5xxg2bm08hbb6d5r3hpz7frn7w3l8l1d"; depends=[qdapTools]; }; - censusapi = derive2 { name="censusapi"; version="0.3.0"; sha256="1i3z54ikg6nlxdq3hrb0a58v92lri096jxmkqqdg70rv089wspmf"; depends=[httr jsonlite]; }; + censusapi = derive2 { name="censusapi"; version="0.4.1"; sha256="0lyy5n1zv22l0lwbkllvx0g6i2vzm7srgynmxhyis4d62cygfbdq"; depends=[httr jsonlite]; }; censusr = derive2 { name="censusr"; version="0.0.4"; sha256="1n9571fyr46wj1dcxc2xgns9865655yzlq7yfz8im014wh0ycwqc"; depends=[dplyr httr stringr]; }; censys = derive2 { name="censys"; version="0.1.0"; sha256="0r0yvaidn0qn96hx461415hywsjfgaz9wvvdssx7w97v2ndnk9sy"; depends=[httr jsonlite purrr stringi]; }; centiserve = derive2 { name="centiserve"; version="1.0.0"; sha256="1m6gqz2rk7023340laa5pc0ncbfka2qi9ajvh65fwijd7xvv3n5c"; depends=[igraph Matrix]; }; @@ -5010,10 +5225,10 @@ in with self; { cepp = derive2 { name="cepp"; version="1.7"; sha256="01hvm6586xnb1crvk7brqh3dm2j44ia5lrl5swnf6pb682yskbq0"; depends=[randtoolbox trust]; }; cepreader = derive2 { name="cepreader"; version="1.1-2"; sha256="0pyycacsnbqz7hyrvrwwmmphrhny0byyxv66fwrvcsk3s88a7crf"; depends=[]; }; cernn = derive2 { name="cernn"; version="0.1"; sha256="0gz2x20pgsiq85hwkkpg4s1cdlw9plygx0446djc7qsymp469p2w"; depends=[]; }; - cetcolor = derive2 { name="cetcolor"; version="0.1.0"; sha256="013ghlfs27a585851cir5fxgxhi41h48irq90932y55npa8gwdak"; depends=[]; }; - ceterisParibus = derive2 { name="ceterisParibus"; version="0.2.1"; sha256="0qjdp4mi1s5j6rzp1z858qv8pxsbh9imykpnh6lmg7diawqpll8h"; depends=[DALEX ggplot2 gower knitr]; }; + cetcolor = derive2 { name="cetcolor"; version="0.2.0"; sha256="0kygdcr9ldanr0z4qpygwh0padki7s2ad0j6myky601g4228z79q"; depends=[]; }; + ceterisParibus = derive2 { name="ceterisParibus"; version="0.3.0"; sha256="1ajc5irn9b0ww58vp09pi5bkgx5qdfs5nih9zyayb3nka3jnrkpz"; depends=[DALEX ggplot2 gower knitr]; }; cfa = derive2 { name="cfa"; version="0.10-0"; sha256="12z58y4ls9m58wpj1xa4ir2p2apzxaskps05sxy2946m24i71zfk"; depends=[]; }; - cffdrs = derive2 { name="cffdrs"; version="1.7.6"; sha256="00n3h2vf855anxh0xgsps7sv0kj819864wjdmkiak1lsacysav8s"; depends=[data_table doParallel foreach raster rgdal spatial_tools]; }; + cffdrs = derive2 { name="cffdrs"; version="1.8.1"; sha256="1l3iihqp5yqr7215ahpb80mdd0qr68xfbhskh7ypl9aq6aw4flzd"; depends=[data_table doParallel foreach geosphere raster rgdal spatial_tools]; }; cfma = derive2 { name="cfma"; version="1.0"; sha256="006z5g3rqpg44jqdf6ivyxr47sxm5cd9cqhayfi8qk73xx5w4lv9"; depends=[]; }; cg = derive2 { name="cg"; version="1.0-3"; sha256="1kbyal1sicbr10yvxpwgcij710kqpi23vmndp9kyfzn3k8zfird3"; depends=[Hmisc lattice MASS multcomp nlme rms survival VGAM]; }; cgAUC = derive2 { name="cgAUC"; version="1.2.1"; sha256="172f9rkfhv4xzwpw8izsnsdbcw9p3hvxhh0fd8hzlkil7vskr3k8"; depends=[Rcpp]; }; @@ -5021,66 +5236,72 @@ in with self; { cgdsr = derive2 { name="cgdsr"; version="1.2.10"; sha256="1xyhw7mhmjichr1l6f9y1qvfj9wm87kfbm87ji7lcwf36gxh5g23"; depends=[R_methodsS3 R_oo]; }; cgh = derive2 { name="cgh"; version="1.0-7.1"; sha256="1fgjz43bgnswlyvrm669x697lybq3jyzz4l8ppgxqwxp4p4d2yqn"; depends=[]; }; cghRA = derive2 { name="cghRA"; version="1.6.0"; sha256="16dlw27s8wckc75xcwc2g74pw6bar0y0ii3h53w1hql05d4f7sb8"; depends=[DNAcopy Rgb]; }; - cgmanalysis = derive2 { name="cgmanalysis"; version="1.3"; sha256="0fb93czybl9rpndvz3lykfiwksa154vdrmils8c8l688c62gyq55"; depends=[gdata pracma zoo]; }; - chandwich = derive2 { name="chandwich"; version="1.0.0"; sha256="05x9mg33yl4d9kh5sc4lqi00hwnxdhfg2m0dkm5q0jynkhap7bmz"; depends=[numDeriv]; }; + cglasso = derive2 { name="cglasso"; version="1.1.0"; sha256="0qr6y06aablncj4ja4xjp4dhykqy15qmbigi4px9snpwssrqhwl2"; depends=[igraph MASS]; }; + cgmanalysis = derive2 { name="cgmanalysis"; version="2.0"; sha256="0j8nl0r69hm5niq7bhjc4rh9sjy5x6pd2dxrsqifj9zv7kz4w4yq"; depends=[gdata ggplot2 lubridate pastecs pracma readr zoo]; }; + cgraph = derive2 { name="cgraph"; version="2.0.3"; sha256="1ag7ajva1af08bgn99ib8ryqwdwcw6nfy4yzfpr19831jgq1hsg9"; depends=[R6]; }; + chandwich = derive2 { name="chandwich"; version="1.1.0"; sha256="0m3fw416kf41sb21xdf1qkj7cj24xagzf31g4mryzwags2xlbzyv"; depends=[numDeriv]; }; changepoint = derive2 { name="changepoint"; version="2.2.2"; sha256="1jbki95pck10phpxna0b4i79hhl912zqi5ii9mjqb673y64dszkj"; depends=[zoo]; }; changepoint_np = derive2 { name="changepoint.np"; version="0.0.2"; sha256="03i4l59h8cr6bizbqn288x9r85kvaz1dyhkv5fsj1189qpdi9m88"; depends=[changepoint zoo]; }; changepointsHD = derive2 { name="changepointsHD"; version="0.3.0"; sha256="05zmypz2jz55m9avzg63dmp7fpcgi7jpc9vf2fv0kywcvf2wz5ym"; depends=[Rcpp RcppArmadillo]; }; changepointsVar = derive2 { name="changepointsVar"; version="0.1.0"; sha256="0kj9m9jik1dm5fx4c4hb559f5irpl1mvxk4wwajd5577a2fdqxb5"; depends=[lars MASS]; }; - charlatan = derive2 { name="charlatan"; version="0.2.0"; sha256="1j8lrkh2s7d3jpc07k3rranf8l5rsp1sp9y42fi1rhfkakwssfqd"; depends=[R6 tibble whisker]; }; + changer = derive2 { name="changer"; version="0.0.3"; sha256="1pmnspadkshz7z9f275vks1xjh6a9k37h7j51dqdjrqilzq7y6sf"; depends=[available devtools git2r]; }; + charlatan = derive2 { name="charlatan"; version="0.3.0"; sha256="1i8n6kmdv8f2mnd626qja979qx35fdl1a8r9akgqznh5bhjqiq42"; depends=[R6 tibble whisker]; }; cheb = derive2 { name="cheb"; version="0.3"; sha256="0vqkdx7i40w493vr7xywjypr398rjzdk5g410m1yi95cy1nk4mc7"; depends=[]; }; - chebpol = derive2 { name="chebpol"; version="1.5"; sha256="1fsxvay91yqbhxcxchd6pf9x8jpjm9qp2rvc79wq5l5g4ng617pj"; depends=[]; }; + chebpol = derive2 { name="chebpol"; version="2.0"; sha256="0iz7iz7b1mc67gkgklh8zmnhacgq1cgdfy0w2wd54g0jz934d77p"; depends=[geometry]; }; + checkLuhn = derive2 { name="checkLuhn"; version="1.1.0"; sha256="1s1ix5n98bcbzcvrz5h19sk9pchdvrhpy3ppmw96ys8vylzm58mv"; depends=[dplyr stringr]; }; checkarg = derive2 { name="checkarg"; version="0.1.0"; sha256="0rkdjs2c4yx9laqgayxz57bwxhwgdh6ndrr4i3b1kh31lcmk1xc6"; depends=[]; }; checkmate = derive2 { name="checkmate"; version="1.8.5"; sha256="1q6igk50lq4fp5d3imgcn1j063h3gsp214ra4nlf534hf4wjlkg9"; depends=[backports]; }; - checkpoint = derive2 { name="checkpoint"; version="0.4.3"; sha256="0r7v7ijyq92yd95ssxxbdlp5dv1sd09yvxr8c0yihf48kzw65s63"; depends=[]; }; + checkpoint = derive2 { name="checkpoint"; version="0.4.5"; sha256="0ml6lr8vmnrj2d073mr6dxsy0sqf50vyc956j9pnmzan2k7qv2wc"; depends=[]; }; checkr = derive2 { name="checkr"; version="0.3.0"; sha256="168grrzl17k43fdrh9ps4hvhiyinldlmdq8bwdpj5b5cvvhh22lp"; depends=[]; }; cheddar = derive2 { name="cheddar"; version="0.1-633"; sha256="09mw8rr5xb06gw3hbk7zv2nnx6mwhs6i19ffbp9pv3yv2945cjlf"; depends=[]; }; - chemCal = derive2 { name="chemCal"; version="0.1-37"; sha256="1sbmr8arczc65nzbgr5rfk2mbbnk6h60ni9cd9jngbhgdf0g1scw"; depends=[]; }; + chemCal = derive2 { name="chemCal"; version="0.2.1"; sha256="1kq82x57qm68im6lyqjqmh4p34s4y7fn5v6ymclxjr47mdv8npb5"; depends=[]; }; chemmodlab = derive2 { name="chemmodlab"; version="1.0.0"; sha256="0lzibshhfz52m61xldf0xq4cc1xx64fjlw18hlkiv65dj3gcj2mh"; depends=[caret class e1071 elasticnet foreach lars MASS nnet pls pROC randomForest rpart tree]; }; chemometrics = derive2 { name="chemometrics"; version="1.4.2"; sha256="0shqns0n964pfwnd0q5sadglrlpgs4g5fbv45fsj9p37l4pq61dp"; depends=[class e1071 lars MASS mclust nnet pcaPP pls robustbase rpart som]; }; cherry = derive2 { name="cherry"; version="0.6-12"; sha256="1b74wlvjqxa532gxs400m1k4qs7xwpdap9ms60nlcwr7x1857mk6"; depends=[bitops lpSolve Matrix]; }; chi = derive2 { name="chi"; version="0.1"; sha256="1y91mwahj4j2wz0y5k5vdpq7ygq834h8jkn37n74lqnwvv1968rr"; depends=[]; }; chi2x3way = derive2 { name="chi2x3way"; version="1.1"; sha256="13qc8sigiw4gcxk8y50q7yfgzbssjyl41fizzjqzcp3p14kpsmzw"; depends=[]; }; + chicane = derive2 { name="chicane"; version="0.1.0"; sha256="1f7sxqwg9s8l3lz538kyq8x5csqyq8g67vpm4zh9c962kg5m3f55"; depends=[data_table doParallel foreach gamlss gamlss_tr MASS]; }; childesr = derive2 { name="childesr"; version="0.1.0"; sha256="14jca7lxyn0fip794l70mznhz4ld6iix995wrmiqynxdms6j80np"; depends=[DBI dbplyr dplyr jsonlite magrittr purrr RMySQL]; }; childhoodmortality = derive2 { name="childhoodmortality"; version="0.3.0"; sha256="1ixd10jyzgr1ssnjas35kngpsqyjzl73wwpvcspv06cn12sv2b8d"; depends=[dplyr matrixStats plyr]; }; childsds = derive2 { name="childsds"; version="0.6.7"; sha256="1m5w0wbdk032b6d6h1704wji84yckyl427bja0mb4vqp28m99z48"; depends=[boot class dplyr gamlss gamlss_dist magrittr purrr reshape2 tibble tidyr]; }; chillR = derive2 { name="chillR"; version="0.70.6"; sha256="0vkw9r2k8xdshwb3v90bp93mgbp3vj04c7hjxcmaxpsqkhxwda04"; depends=[fields httr jsonlite Kendall pls R_utils raster RCurl readxl RMAWGEN sp XML]; }; chinese_misc = derive2 { name="chinese.misc"; version="0.1.9"; sha256="1rs16a5rqp0yq1c5j4yl6yji7hf9x76v6x7qmxppshjii5r8055h"; depends=[jiebaR Matrix NLP purrr Ruchardet slam stringi tm]; }; chipPCR = derive2 { name="chipPCR"; version="0.0.8-10"; sha256="1mff7n7ga4sfwvcq7zkjkrl68nybnm2zkn37hmxvnw9yl3ls9lnw"; depends=[lmtest MASS outliers ptw quantreg Rfit robustbase shiny signal]; }; - chngpt = derive2 { name="chngpt"; version="2018.6-2"; sha256="043aw52kimif7wbz87hf7bg0vmd9n73pj87lvqp0ms99jmp7q2w0"; depends=[boot kyotil MASS survival]; }; + chngpt = derive2 { name="chngpt"; version="2018.7-25"; sha256="0c9vxlhrcyrbrp8cj0xvm2z4hy1m2rs538i4kzhrw8xlfiwb8ydd"; depends=[boot kyotil MASS survival]; }; choiceDes = derive2 { name="choiceDes"; version="0.9-3"; sha256="1nsc8p4svfc6z7ckffl24c0acnaxi6cnpz7jq03vzn6spxvpjcmw"; depends=[AlgDesign]; }; - cholera = derive2 { name="cholera"; version="0.4.0"; sha256="0pm5kbaqkxkwzyda4ms90yivx0iv7hcn2z65xfqcqlsxsjbvlmhs"; depends=[deldir HistData igraph KernSmooth pracma RColorBrewer scales sp]; }; + cholera = derive2 { name="cholera"; version="0.5.1"; sha256="0v59pzsi8wg1b7f18zkhxmqldvpan296sw079a58krgcfinjm4ss"; depends=[deldir HistData igraph KernSmooth pracma RColorBrewer scales sp]; }; choplump = derive2 { name="choplump"; version="1.0-0.4"; sha256="0fn6m3n81jb7wjdji4v04m53gakjfsj3ksm546xxz5zm7prk237s"; depends=[]; }; chopthin = derive2 { name="chopthin"; version="0.2.2"; sha256="1ixmgq6igd2ji88qba7scny1j8rrizcf76dk4ymk3hah5dln97fz"; depends=[Rcpp]; }; chords = derive2 { name="chords"; version="0.95.4"; sha256="1v6zvl1mv9fyf6hx1fpbj3i7s893n4y1w4j9rw1arps006qz2jqn"; depends=[MASS Matrix]; }; - choroplethr = derive2 { name="choroplethr"; version="3.6.2"; sha256="0am163df7ggvvk8bk9hjq6f2jc55zzq24skpsgrx1qdlpgv7mls5"; depends=[acs dplyr ggmap ggplot2 gridExtra Hmisc R6 RgoogleMaps scales stringr tigris WDI]; }; + choroplethr = derive2 { name="choroplethr"; version="3.6.3"; sha256="0m6kyrgnv5s1q2ncc63rfxcwqdqx5adqk14q57ss4r84i14dm5yb"; depends=[acs dplyr ggmap ggplot2 gridExtra Hmisc R6 RgoogleMaps stringr tigris WDI]; }; choroplethrAdmin1 = derive2 { name="choroplethrAdmin1"; version="1.1.1"; sha256="13ljs21hdhiv6n4napmk1gjnjhpll6j5wyijzv4xnnbi1y3ns7a9"; depends=[ggplot2]; }; choroplethrMaps = derive2 { name="choroplethrMaps"; version="1.0.1"; sha256="0ghqb2d1h0qkbcsll6ck2qk5sfvdwsrlh3phlbsjbak30832j7fr"; depends=[]; }; - chorrrds = derive2 { name="chorrrds"; version="0.1.4"; sha256="1mfvzj3bwipdhcdhsp66ihchnnvdbcb9zww2a19ldwr6bwx7nfic"; depends=[dplyr httr jsonlite magrittr plyr stringr XML]; }; + chorrrds = derive2 { name="chorrrds"; version="0.1.7"; sha256="0dxy57w91cjfya5v4sgmih0snzqbbqh9ljyk9gb59z83dm6cj9fg"; depends=[dplyr magrittr plyr purrr stringr XML]; }; chromer = derive2 { name="chromer"; version="0.1"; sha256="0fzl2ahvzyylrh4247w9yjmwib42q96iyhdlldchj97sld66c817"; depends=[data_table dplyr httr]; }; chromoMap = derive2 { name="chromoMap"; version="0.1"; sha256="10cj9liggnbnr4isqmm8jp700z3qj4zq0dm7f7jyj7f0lg8my80y"; depends=[htmltools htmlwidgets]; }; chromoR = derive2 { name="chromoR"; version="1.0"; sha256="1x11byr6i89sdk405h6jd2rbvgwrcvqvb112bndv2rh9jnrvcw4z"; depends=[gdata haarfisz]; }; - chron = derive2 { name="chron"; version="2.3-52"; sha256="185lfp75cv3l4cavg64sccj8lgc5sivch13n6gkannv3pd5cyzy4"; depends=[]; }; + chron = derive2 { name="chron"; version="2.3-53"; sha256="02bkywwsxwrxc035hv51dxgdm1fjxdm7dn19ivifln59dfs1862j"; depends=[]; }; chunkR = derive2 { name="chunkR"; version="1.1.1"; sha256="1kw3hsx5k4cdicx0hc1v0mf2nzvqg95shx2xv05vb2pass48qw48"; depends=[Rcpp]; }; chunked = derive2 { name="chunked"; version="0.4"; sha256="0pqk6nnxxnlsw9zal62ajjalrlmvkdrzyz2l8r10jd7s61vhra40"; depends=[DBI dplyr LaF lazyeval]; }; - ciTools = derive2 { name="ciTools"; version="0.3.0"; sha256="0mqrnln7iz6jm30nh1qb2457icaz3hcqmgqbj8m61z0sf6jj9pd7"; depends=[arm boot dplyr lme4 magrittr MASS tibble]; }; + ciTools = derive2 { name="ciTools"; version="0.5.0"; sha256="0gzzzy2siwlhvwfv2hrasz4m9p8qir8w11bhc3hwkcidb4z8ydqs"; depends=[arm boot dplyr lme4 magrittr MASS survival tibble]; }; cifti = derive2 { name="cifti"; version="0.4.5"; sha256="092334lcpkzv52bg53hzx64dnrwq67f3p9fzwchmafx1l46xrqx9"; depends=[gifti oro_nifti R_utils xml2]; }; cin = derive2 { name="cin"; version="0.1"; sha256="1pwvy5nh5nrnysfqrzllb9fcrpddqg02c7iw3w9fij2h8s2v6kq5"; depends=[]; }; cir = derive2 { name="cir"; version="2.0.0"; sha256="0ycjnbikpyhcfdik7c5knw4s9gl8y5h4219c4fhs4axs04np004v"; depends=[]; }; circglmbayes = derive2 { name="circglmbayes"; version="1.2.3"; sha256="1a60d8jpvwx2qwmy2if60c5vni9hp73fdwgz7mwi5xd5l67zwd3h"; depends=[BH coda ggplot2 Rcpp RcppArmadillo reshape2 shiny]; }; circlize = derive2 { name="circlize"; version="0.4.4"; sha256="1l28maiqi549z191srncxgabx5fnvf0lld7smzwfd3vr5cx8nqww"; depends=[colorspace GlobalOptions shape]; }; circular = derive2 { name="circular"; version="0.4-93"; sha256="0hki85rs8wc5950pjaw28q54rly2napfbcrx3pchlfap6wwy5kkn"; depends=[boot mvtnorm]; }; + circumplex = derive2 { name="circumplex"; version="0.2.0"; sha256="1i86b4bqv9s8as5r0y4ldiwikvpx3srn6fy8gd9g098m4khc7kl9"; depends=[assertthat boot dplyr ggforce ggplot2 glue htmlTable magrittr MASS purrr Rcpp RcppArmadillo rlang tibble tidyr]; }; cit = derive2 { name="cit"; version="2.2"; sha256="1lf8r3r4zwvs08vl4byhw6rvf54nb7vg83558pi0b5866m7in4sc"; depends=[]; }; citbcmst = derive2 { name="citbcmst"; version="1.0.4"; sha256="1zkd117h9nahwbg5z6byw2grg5n3l0kyvv2ifrkww7ar30a2yikl"; depends=[]; }; citccmst = derive2 { name="citccmst"; version="1.0.2"; sha256="1b7awn1hjckxisfdi4ck697hwd4a5sqklwi7xzh6kgqhk9pv7vjn"; depends=[]; }; citr = derive2 { name="citr"; version="0.2.0"; sha256="1nzn0yw74k6zkwzb6spfzqkj3cbx6ry6ypbsnhy6w2flabnnvy4v"; depends=[assertthat curl miniUI RefManageR rstudioapi shiny yaml]; }; ciuupi = derive2 { name="ciuupi"; version="1.0.0"; sha256="1c72crf0his7vzmh86isvcvi0ahxnqdq4i6ms84hk20jmlz2hxin"; depends=[functional nloptr pracma statmod]; }; - civis = derive2 { name="civis"; version="1.5.0"; sha256="1cxafcnmbr97i1ygfrwn0d91hyr8irxp1g9zc9zmmaqb3kw5s0sx"; depends=[DBI dbplyr devtools dplyr feather future ggplot2 httr jsonlite lubridate memoise purrr roxygen2 stringr testthat]; }; - cjoint = derive2 { name="cjoint"; version="2.0.6"; sha256="1bhzw751ll43qbyif589yxmi3m1pbm206lqnsc5zcxsnxjf4li5n"; depends=[ggplot2 lmtest Matrix sandwich survey]; }; + civis = derive2 { name="civis"; version="1.5.1"; sha256="13zc0p63i2iqnc27xcnkvhfz0bxyv4grqg4qi8ah7a1n7d2jq2ks"; depends=[DBI dbplyr devtools dplyr feather future ggplot2 httr jsonlite lubridate memoise purrr roxygen2 stringr testthat]; }; + cjoint = derive2 { name="cjoint"; version="2.1.0"; sha256="1bs380ji9vsc1d77wqhl0ij9xblww3g9x3hiwpcpz26wihqcx7ac"; depends=[DT ggplot2 lmtest Matrix sandwich shiny shinyBS shinyjs survey]; }; ck37r = derive2 { name="ck37r"; version="1.0.0"; sha256="0nn2sfsfs8mhgjrz0ghn041ybhj2qim4rs3lkci7s4n95c8hbgdi"; depends=[caret cvAUC doParallel doSNOW foreach ggplot2 pryr randomForest RANN reader RhpcBLASctl ROCR snow stringr SuperLearner tmle]; }; ckanr = derive2 { name="ckanr"; version="0.1.0"; sha256="1cvn0cih763f0ppl1y90vnwj3cgqyb7az89sn12nyn2qb6igiqyl"; depends=[httr jsonlite magrittr]; }; clValid = derive2 { name="clValid"; version="0.6-6"; sha256="1l9q7684vv75jnbymaa10md13qri2wjjg7chr1z1m0rai8iq3xxw"; depends=[class cluster]; }; - cladoRcpp = derive2 { name="cladoRcpp"; version="0.14.4"; sha256="0d4vl7xrrwbhhx56ymw52rb5svw9nskxdya4dl04lw1qxc45p4jy"; depends=[Rcpp RcppArmadillo]; }; + cladoRcpp = derive2 { name="cladoRcpp"; version="0.15"; sha256="0glx3gn2pvisrhplwd89j6l0qs3cfy4qigmncl4n631ic93y3dz4"; depends=[Rcpp RcppArmadillo]; }; clam = derive2 { name="clam"; version="2.3.1"; sha256="1n30fvx4macyawhzv17bzvc1s4qdn51p9mx28apfjbf80qck24g9"; depends=[]; }; clampSeg = derive2 { name="clampSeg"; version="1.0-4"; sha256="0clmv53wz7shawg6mp4q3qp0z0gmd8jmd6flgzn2q1m8j2i62vq0"; depends=[Rcpp stepR]; }; clarifai = derive2 { name="clarifai"; version="0.4.2"; sha256="0igi4xl27nz0r85hpws2zfc2gn5z2nmywp3saxgp74mh2y99lg6s"; depends=[curl jsonlite]; }; @@ -5092,23 +5313,25 @@ in with self; { classifly = derive2 { name="classifly"; version="0.4"; sha256="0mw1vcas0gr1r4yvh0j02zhk7kp5342r0bhhg776hqgqdczgh5zj"; depends=[class plyr]; }; classify = derive2 { name="classify"; version="1.3"; sha256="0134h12h6v06d7ldj9qgqjhh5f5ap98pvr0v6d4k8dqndnn0pggy"; depends=[ggplot2 lattice plyr R2jags Rcpp reshape2]; }; classyfire = derive2 { name="classyfire"; version="0.1-2"; sha256="0rar3mi2m1wf14lmahjbpdh1jlnisvgsbx86xbqlb8c0f8zfzxq3"; depends=[boot e1071 ggplot2 neldermead optimbase snowfall]; }; + classyfireR = derive2 { name="classyfireR"; version="0.1.1"; sha256="0r48xxiqhdgq1mx08ijhr21zj6gihadxajm7w7106xkpkz5diilj"; depends=[clisymbols crayon httr jsonlite magrittr tibble]; }; cld2 = derive2 { name="cld2"; version="1.2"; sha256="03ffg1nxdlmg66sgg0w2jdx2s5jzdp8qhja24z0il2qy3qsa915k"; depends=[Rcpp]; }; cld3 = derive2 { name="cld3"; version="1.1"; sha256="00jbncap8h0s26iw5i0891rag5gpf1n3s9imn6n0zbwdn1791ayr"; depends=[Rcpp]; }; cleanEHR = derive2 { name="cleanEHR"; version="1.0"; sha256="0i8q7y4izc7q1pshdajy0n9wyihj4wlzzkd52ykam3dxqnwlnyh4"; depends=[data_table ggplot2 knitr pander Rcpp XML yaml]; }; cleanNLP = derive2 { name="cleanNLP"; version="2.0.3"; sha256="0hmivb2yhj47alxc9z1hlk23hfan9vz938m6xyp639xf58l97scz"; depends=[dplyr Matrix stringi]; }; + cleandata = derive2 { name="cleandata"; version="0.2.0"; sha256="0mwn016czp1qpc8g5h3l6njcbdbzhm5fm89d6x0jqyxm4v6rgxnr"; depends=[]; }; cleangeo = derive2 { name="cleangeo"; version="0.2-2"; sha256="1bhpn53v36652mwg2ba2a6cs34slb7i0df2ibssyr2lnx5gciq4i"; depends=[maptools rgeos sp]; }; cleanr = derive2 { name="cleanr"; version="1.1.3"; sha256="0vf2c2inb729kzmpxaznqa2zwj80j1ix9198gc36zq41ag5pd7jk"; depends=[checkmate]; }; clere = derive2 { name="clere"; version="1.1.4"; sha256="1nk3chcnaa4y1c5rr6c3bapvi106ikbk9grqcq6s6j0imny1jp4a"; depends=[lasso2 Rcpp RcppEigen]; }; clespr = derive2 { name="clespr"; version="1.1.2"; sha256="1993kd70w48a110im47vcpll0c6nfrm7m33r6l8rzgwnpsmcls8g"; depends=[AER clordr doParallel foreach magic MASS pbivnorm survival]; }; - clhs = derive2 { name="clhs"; version="0.6-0"; sha256="1vw8z4kmmpd8sbx7n8fzdd7lhg10qpnnx31nnjhv4dbd6v2nqii9"; depends=[cluster ggplot2 plyr raster reshape2 scales sp]; }; - cli = derive2 { name="cli"; version="1.0.0"; sha256="07as3dr7vwx02p3qgzlmxz1dlrd3x3lysrzp222ip9jcjpydp8wg"; depends=[assertthat crayon]; }; - clickR = derive2 { name="clickR"; version="0.4.05"; sha256="0vi8bgvnlq09wxzc51kllngcw9dw3j2m2rh6dwa017xml2cl37j8"; depends=[beeswarm boot flextable lme4 lmerTest officer xtable]; }; + clhs = derive2 { name="clhs"; version="0.7-0"; sha256="0wliffs16misvlsxcng89a6yasq9blrlic88n59334vj60p42l3m"; depends=[cluster ggplot2 plyr raster reshape2 scales sp]; }; + cli = derive2 { name="cli"; version="1.0.1"; sha256="1r2yih4c0bdmbx0qrarlf0m1p5z30sri755zmdazsq2pw76zp07g"; depends=[assertthat crayon]; }; + clickR = derive2 { name="clickR"; version="0.4.20"; sha256="140ncl7iv48yxnwf55rf8cwcyznzw7kslkjzymslyqmhvvw43q6p"; depends=[beeswarm boot flextable lme4 lmerTest officer xtable]; }; clickstream = derive2 { name="clickstream"; version="1.3.0"; sha256="01bii527xy7hdph1pm6f1g4qnwa5yf3mwz01rjg1h2gc12s5vzgg"; depends=[arules ClickClust data_table ggplot2 igraph linprog MASS plyr reshape2 Rsolnp]; }; - clifro = derive2 { name="clifro"; version="3.1-5"; sha256="1fbl5zljy60xp3klrsgs84rqw9484xmyq84n3wkrqc6pyvhskp4c"; depends=[ggplot2 lubridate RColorBrewer RCurl reshape2 scales selectr XML]; }; + clifro = derive2 { name="clifro"; version="3.2-0"; sha256="1pq66wg19dvmacqj5pdh8ngxq1irihg76g0hnfy16gxsz7snvnkh"; depends=[ggplot2 lubridate magrittr RColorBrewer RCurl reshape2 scales xml2]; }; clikcorr = derive2 { name="clikcorr"; version="1.0"; sha256="0zdnbcl5q293mmm6pbn4ri7p1q6z6sff74axsb3nyd153v2xamr5"; depends=[mvtnorm]; }; climatol = derive2 { name="climatol"; version="3.1.1"; sha256="012spjgw20bg4rlxgwh05rhaswa4afbd35sq1isidm6i73ma0yjq"; depends=[mapdata maps]; }; climbeR = derive2 { name="climbeR"; version="0.0.1"; sha256="10i74bph7dhv2xj01qdhymlmfwj32lzxivanif11zmzmq9p5bqsw"; depends=[ggplot2]; }; - climdex_pcic = derive2 { name="climdex.pcic"; version="1.1-6"; sha256="0dyhqxrma8g4ny4afv6drr885m88q2b8g1n19yy3yjbrbddyz8yl"; depends=[caTools PCICt Rcpp]; }; + climdex_pcic = derive2 { name="climdex.pcic"; version="1.1-9"; sha256="0bnxdfqc207fjjb8qas9wvmw1kpi69csadx5ylsbxwb53cy1g93i"; depends=[PCICt Rcpp]; }; clime = derive2 { name="clime"; version="0.4.1"; sha256="0qs9i7cprxddg1cmxhnmcfhl7v7g1r519ff2zfipxbs59m5xk9sf"; depends=[lpSolve]; }; climextRemes = derive2 { name="climextRemes"; version="0.2.0"; sha256="0cjvmd48iaid0f95354zpxlgwy79jga9lz0p82yiv0fb2mvjpbqn"; depends=[boot extRemes]; }; climwin = derive2 { name="climwin"; version="1.2.0"; sha256="0xqgf9hmpidxq85rfm0vndh3waw0qf2yhrzmp04sqbbqhzkf9v7n"; depends=[evd ggplot2 gridExtra lme4 lubridate Matrix MuMIn nlme numDeriv plyr RcppRoll reshape]; }; @@ -5124,37 +5347,38 @@ in with self; { clogitboost = derive2 { name="clogitboost"; version="1.1"; sha256="19wcb7229amlxn6xahxj6pf9rwfm02s7qkxz2yvyhnq95y0clxkm"; depends=[Rcpp]; }; clordr = derive2 { name="clordr"; version="1.3.0"; sha256="16cw6i91azi3xw9slzy2v8vpdkqik8k02mvgvcl9a3irbl7wgz10"; depends=[doParallel foreach MASS pbivnorm rootSolve ttutils]; }; cloudUtil = derive2 { name="cloudUtil"; version="0.1.12"; sha256="18g946j00anlk20d0fh01w0xyj1kwyy7jhlgz5a85wmp6s2gkz74"; depends=[]; }; - cloudml = derive2 { name="cloudml"; version="0.5.1"; sha256="1h276vxb1cfqlcbj9fciysdj4wr9zvwglxfq2sh6hh08lm1w3c0z"; depends=[jsonlite packrat processx rprojroot rstudioapi tfruns withr yaml]; }; - clpAPI = derive2 { name="clpAPI"; version="1.2.7"; sha256="19bn5d7qjj7g0x17jnh2snymcn2r2skzj35hkhsgcj5r43834f3r"; depends=[]; }; + cloudml = derive2 { name="cloudml"; version="0.6.0"; sha256="0p34wrrs06c17lbjlkjhm04ffg3l3zfkxb7swikjbim0j5aww2kh"; depends=[config jsonlite packrat processx rprojroot rstudioapi tfruns withr yaml]; }; + clpAPI = derive2 { name="clpAPI"; version="1.2.9"; sha256="1dgfs124lcarcwh75f5mi5z9y723s2ik5kz2g9fxgcama7r01a1x"; depends=[]; }; clttools = derive2 { name="clttools"; version="1.3"; sha256="0va9k1b4xsb2sgpxzvid6sa8m6b8i3r4kgghclmb78nnrs480cwi"; depends=[]; }; clubSandwich = derive2 { name="clubSandwich"; version="0.3.2"; sha256="1q4kidxcarlazh9zaav6vdc7ixb3hdg3zh5kr6mwkm087gi05nw5"; depends=[sandwich]; }; - clue = derive2 { name="clue"; version="0.3-55"; sha256="0hprhzd9i5ifrmfcgddgacg404f6y1zpcpqbyqza4c5lw44am4nc"; depends=[cluster]; }; + clue = derive2 { name="clue"; version="0.3-56"; sha256="1gc7galavhivs2102vvc8c51555hghkawiv8vzciwwpscr19zxg9"; depends=[cluster]; }; clues = derive2 { name="clues"; version="0.5.9"; sha256="0znlsbfmnz5wkp2cswrkjbgchdmmf7h78mv2zwx382m9n9n9hshy"; depends=[]; }; - clusrank = derive2 { name="clusrank"; version="0.5-3"; sha256="0am8q6xc9x9g42gmn0khdizlwrz3ssrripqrw0a36apzk61i6qpp"; depends=[MASS Rcpp]; }; + clusrank = derive2 { name="clusrank"; version="0.6-2"; sha256="1hjxks8cb1mp1d93rcpwqjrxqavspmzjrxvflhv6nqx41ar9dpxv"; depends=[MASS Rcpp]; }; clust_bin_pair = derive2 { name="clust.bin.pair"; version="0.1.2"; sha256="11lqd3vmx4kg08n6iv9na8rra49dkldx4f8jyf43hppbjrbvfinm"; depends=[]; }; clustEff = derive2 { name="clustEff"; version="0.1.2"; sha256="1hy7jc8yfg554l439lfrppdsizrdmvxrqf9dwbkjckbvggg54f0k"; depends=[cluster fda qrcm]; }; clustMD = derive2 { name="clustMD"; version="1.2.1"; sha256="0w4s9dab2mm5x0xibyl6s101c64if945a2cmwin9psd95p76mcny"; depends=[ggplot2 MASS mclust msm mvtnorm reshape2 truncnorm viridis]; }; - clustMixType = derive2 { name="clustMixType"; version="0.1-29"; sha256="01rc84ppy5mw3cdcx15xs6061lg1mwh6kxa80rnj3ax3g10x37sh"; depends=[RColorBrewer]; }; + clustMixType = derive2 { name="clustMixType"; version="0.1-36"; sha256="111pnhj92hly3a1km41wdq3w80s6lld8j31rygbczb5dig5cmlb9"; depends=[RColorBrewer]; }; clustRcompaR = derive2 { name="clustRcompaR"; version="0.2.0"; sha256="151xq8qf1mrl35kyhdliwl2jpdkpkbl3gdnrvrybanihry2p0kqg"; depends=[dplyr ggplot2 ppls quanteda]; }; cluster = derive2 { name="cluster"; version="2.0.7-1"; sha256="1grxbifbc4nwig25dmjgkympnbzb4al0w6k1c0ibdhpk1h4l20di"; depends=[]; }; cluster_datasets = derive2 { name="cluster.datasets"; version="1.0-1"; sha256="0i68s9305q08fhynpq24qnlw03gg4hbk4184z3q3ycbi8njpr4il"; depends=[]; }; - clusterCrit = derive2 { name="clusterCrit"; version="1.2.7"; sha256="13smdm8dmp4795qqn8an3k22l7xs4i4kgazyjzxdbzkg742akk7q"; depends=[]; }; + clusterCrit = derive2 { name="clusterCrit"; version="1.2.8"; sha256="10pz1bikdbkm2ky3xnagp0qv60whalavp6j39b4p7d75jj5xcxgk"; depends=[]; }; clusterGeneration = derive2 { name="clusterGeneration"; version="1.3.4"; sha256="1ak8p2sxz3y9scyva7niywyadmppg3yhvn6mwjq7z7cabbcilnbw"; depends=[MASS]; }; clusterGenomics = derive2 { name="clusterGenomics"; version="1.0"; sha256="127hvpg06is4x486g1d5x7dfkrbk7dj35qkds0pggnqxkq3wsc1c"; depends=[]; }; clusterPower = derive2 { name="clusterPower"; version="0.6.111"; sha256="1mwq188x9d495my75cdcahfjm3w46cas9jqxks5c0j63395cw9g3"; depends=[lme4]; }; - clusterRepro = derive2 { name="clusterRepro"; version="0.5-1.1"; sha256="0vsf6cq6d51a4w23ph8kdz2h8dfpzyd6i85049p2wakn1kdvkz5p"; depends=[]; }; + clusterRepro = derive2 { name="clusterRepro"; version="0.9"; sha256="0s7qqvaf5yxxwhw6qyzfmk65c49yz405gljarwav6aglkx9883cl"; depends=[]; }; clusterSEs = derive2 { name="clusterSEs"; version="2.5"; sha256="0m7vlcjs6zmfaxi1kn68fgcvfrb1gpky2fcg8jhrwc3yxzg23m74"; depends=[AER Formula lmtest mlogit plm sandwich]; }; - clusterSim = derive2 { name="clusterSim"; version="0.47-1"; sha256="0k9cn0ycz7l9g4lb434cqp9yx2ilmp25xa5hlhma9jmxlbdsbji2"; depends=[ade4 cluster e1071 MASS modeest R2HTML rgl]; }; + clusterSim = derive2 { name="clusterSim"; version="0.47-2"; sha256="151cg89ac8b66bgcgpl3w9wvbvxs9g3v9vh8f3z6vg6fklrf5x2d"; depends=[ade4 cluster e1071 MASS modeest R2HTML rgl]; }; clusteredinterference = derive2 { name="clusteredinterference"; version="1.0.0"; sha256="1dnbymivxkrhx39maannhvm8ynlgjxsiavd2d9ych5nq4mjvhnjg"; depends=[cubature Formula lme4 numDeriv rootSolve]; }; clusterfly = derive2 { name="clusterfly"; version="0.4"; sha256="0mxpn7aywqadyk43rr7dlvj0zjcyf4q7qbqw5ds38si7ik34lkrg"; depends=[e1071 plyr reshape2 rggobi RGtk2]; }; clusterhap = derive2 { name="clusterhap"; version="0.1"; sha256="1ic6588mqp146jsvrxlxk449zw4n81xixgrny9r29497z7hg5a1m"; depends=[]; }; clustering_sc_dp = derive2 { name="clustering.sc.dp"; version="1.0"; sha256="0cppka7613cbjjf1q2yp6fln511wbqdhh8d4gs6p0fbq379kzmvc"; depends=[]; }; - clusterlab = derive2 { name="clusterlab"; version="0.0.2.2"; sha256="0pls0yk5x1a48kg1vwzm60yvpmy85gflg9kf0znvkv4k4xrz5smc"; depends=[ggplot2 reshape]; }; - clustermq = derive2 { name="clustermq"; version="0.8.4.1"; sha256="0j8xaj2spqsvr1dmzz2xi8qwwwyvhw8nmrg3jy52zk20pcqw3c03"; depends=[infuser narray progress purrr R6 rzmq]; }; + clusterlab = derive2 { name="clusterlab"; version="0.0.2.5"; sha256="0v9nk92sbca66w416jhvrq3ldgsc76mlir89yi2r4k2i8ymw1xr6"; depends=[ggplot2 reshape]; }; + clustermq = derive2 { name="clustermq"; version="0.8.5"; sha256="0asa48gx9wycp87qgk7f6h27kp4kr5bpxs1lx1j2jm7b1ssqjsm4"; depends=[infuser narray progress purrr R6 rzmq]; }; clusternomics = derive2 { name="clusternomics"; version="0.1.1"; sha256="05nkw6h2dvky07fj50myzw5xlkqyiflbn4vwqw8a1q2idv4awi7b"; depends=[magrittr MASS plyr]; }; clustertend = derive2 { name="clustertend"; version="1.4"; sha256="1aqg8cy1hk3lmzvyqh9qc1mcknrva2i0c77hyd0yff9whz80ik4j"; depends=[]; }; clusteval = derive2 { name="clusteval"; version="0.1"; sha256="1ld0bdl4fy8dsfzm3k7a37cyxc6pfc9qs31x4pxd3z5rslghz7rj"; depends=[mvtnorm Rcpp]; }; clustrd = derive2 { name="clustrd"; version="1.2.2"; sha256="0jcx6afns87wyrc7j2rmc57q4447caxwrkq0j7fys5jbkcidw7bh"; depends=[ca cluster corpcor dplyr dummies fpc GGally ggplot2 ggrepel plyr]; }; + clustree = derive2 { name="clustree"; version="0.2.2"; sha256="14n4h7200r66k74jljkgrihz9znv96d2lr2jp878rq07sszjy90h"; depends=[checkmate dplyr ggplot2 ggraph ggrepel igraph rlang tidygraph viridis]; }; clustsig = derive2 { name="clustsig"; version="1.1"; sha256="0n5nf712vsa8zb0c2lv4gjqsgva62678vjngr9idgswb73shxm8v"; depends=[]; }; clustvarsel = derive2 { name="clustvarsel"; version="2.3.2"; sha256="11xd3pgr4i15q9rcim8y6ybi1iijv59k7f8wh0b2368kz3kz54cj"; depends=[BMA foreach iterators Matrix mclust]; }; clv = derive2 { name="clv"; version="0.3-2.1"; sha256="1qgp2qhblg6ysyrlg0ad169ahwhcyn5pvsqzdlqj700y1k7wl7mc"; depends=[class cluster]; }; @@ -5166,32 +5390,34 @@ in with self; { cmpprocess = derive2 { name="cmpprocess"; version="1.0"; sha256="0gqfmbm86bfi2l81pf2dn70rxg58h1y8hiyrp8sv9v84cx20422v"; depends=[compoisson numDeriv]; }; cmprsk = derive2 { name="cmprsk"; version="2.2-7"; sha256="1imr3wpnj4g57n2x4ryahl4lk8lvq9y2r7319zv3k82mznha8bcm"; depends=[survival]; }; cmprskQR = derive2 { name="cmprskQR"; version="0.9.1"; sha256="002s6ls670sdzrxgqv9gbl646b675q1gn6dzkngnf6rgcdqwid7n"; depends=[quantreg survival]; }; - cmrutils = derive2 { name="cmrutils"; version="1.3"; sha256="0zjc0bwp2p03hmnj3zjw7800pcdw8b8161y68npyp3hya0s4i9x0"; depends=[chron]; }; - cmsaf = derive2 { name="cmsaf"; version="1.9.1"; sha256="02l1g5l42lxg3wlpjg5qm6h8mfr1bdcpi052z8masxf6xf4l0abr"; depends=[fields ncdf4 raster sp]; }; - cmvnorm = derive2 { name="cmvnorm"; version="1.0-3"; sha256="0810kzg78yaxzniq59a4swvdk9qxp37ja52f5n1zssgn0cwz1vk9"; depends=[elliptic emulator]; }; + cmrutils = derive2 { name="cmrutils"; version="1.3.1"; sha256="0nrq84bkd23lvvg8ls2smkjcnfnydhbcni3n6s8w0579i9xga8dv"; depends=[chron]; }; + cmsaf = derive2 { name="cmsaf"; version="1.9.4"; sha256="01z6i3vjilr8nhjkdjifhg3vbfpkk7rii4hlv6rhy9cvpqs6f1d6"; depends=[fields ncdf4 raster sp]; }; + cmvnorm = derive2 { name="cmvnorm"; version="1.0-5"; sha256="1cyiw12fmm83xjlsj8wszyr9sym1b4y3cns6naagvv8037wnh0wb"; depends=[elliptic emulator]; }; cna = derive2 { name="cna"; version="2.1.1"; sha256="1m4920ya3nm5x5yyzpd4g0vgnk4f0lc62c2favymk03ldg6kd6c4"; depends=[matrixStats Rcpp]; }; cnbdistr = derive2 { name="cnbdistr"; version="1.0.1"; sha256="05qi41jimslbngjgbwzfda0q25hb28ax79v9yckvrbpgjc8dk990"; depends=[hypergeo]; }; cncaGUI = derive2 { name="cncaGUI"; version="1.0"; sha256="1v55kvrc05bsm1qdyfw3r3h64wlv3s6clxbr8k512lfk99ry42kn"; depends=[MASS plotrix rgl shapes tcltk2 tkrplot]; }; cnmlcd = derive2 { name="cnmlcd"; version="1.2-0"; sha256="1vpn926wf8vkifscnb35y4c74721iar2wykrl50fcv0fg16yggnd"; depends=[lsei]; }; - coRanking = derive2 { name="coRanking"; version="0.1.3"; sha256="1ss00l0c99fi9p6gcimb31nrl5iflps6lvplnjjqwcqjkb2pjh9p"; depends=[Rtsne scatterplot3d]; }; + coRanking = derive2 { name="coRanking"; version="0.1.4"; sha256="03wvy19jrb3q31yfpmakji25zwc6zx26irj4rwkad81iwdqihq3s"; depends=[]; }; coala = derive2 { name="coala"; version="0.5.2"; sha256="1rj9my20ba79alkhszh5lfvb9gjr6vcgiwqk2szawkpd1np3lpsr"; depends=[assertthat digest R6 Rcpp RcppArmadillo rehh scrm]; }; coalescentMCMC = derive2 { name="coalescentMCMC"; version="0.4-1"; sha256="0xxv1sw5byf84wdypg5sfazrmj75h4xpv7wh4x5cr9k0vgf80b3s"; depends=[ape coda lattice Matrix phangorn]; }; - coalitions = derive2 { name="coalitions"; version="0.6.2"; sha256="0plzrjjsbbr5mw6wqirxp1wgpl2bw2kh0gdalr8c8v2z7hc1d9r6"; depends=[checkmate dplyr forcats gtools jsonlite lubridate magrittr purrr RCurl reshape2 rlang rvest stringr tidyr xml2]; }; + coalitions = derive2 { name="coalitions"; version="0.6.5"; sha256="0s91yg60cpnn2fd185m7bww93kls4qlcq6bcy5nr5kmgiscril3p"; depends=[checkmate dplyr forcats gtools jsonlite lubridate magrittr purrr RCurl reshape2 rlang rvest stringr tidyr xml2]; }; coarseDataTools = derive2 { name="coarseDataTools"; version="0.6-3"; sha256="0f1fkpmqq142yrqzbqv11s5q4jkq7dilmrllcns871hc6vah6ikd"; depends=[MCMCpack]; }; - cobalt = derive2 { name="cobalt"; version="3.3.0"; sha256="12pdcdjca9lncvjpdmpss74sz4jlk33p1l6nmyk2qvwzpf2s8f1d"; depends=[crayon ggplot2 ggstance]; }; + cobalt = derive2 { name="cobalt"; version="3.5.0"; sha256="0vczislwy92a7p91ip0mwhh6v5n4wgk7fy9dqc1r746ivx8h13yv"; depends=[crayon ggplot2 ggstance]; }; + cobiclust = derive2 { name="cobiclust"; version="0.1.0"; sha256="068cqrhx7lxsvcjb62rgrca7y20cybz4445bl1qc6k16ca4bh0m9"; depends=[cluster]; }; cobs = derive2 { name="cobs"; version="1.3-3"; sha256="1pqvz7czcchri4x79g78hbwyagb3bqzdqb047zkbdinyz067c7kb"; depends=[quantreg SparseM]; }; - cocktailApp = derive2 { name="cocktailApp"; version="0.1.0"; sha256="0gc75qy0k01z0r5hl07gyc3gi98fcmapwq523vldp04arn3glnb4"; depends=[dplyr DT forcats ggplot2 ggtern magrittr shiny shinythemes tibble tidyr]; }; + cocktailApp = derive2 { name="cocktailApp"; version="0.2.0"; sha256="05jw72v7gayyfflyy5g249d4sl689a55bf7ycijiks2s5gbj68b6"; depends=[dplyr DT forcats ggplot2 magrittr shiny shinythemes Ternary tibble tidyr]; }; cocor = derive2 { name="cocor"; version="1.1-3"; sha256="106zyrrypil8jyg0pva5zj4hgb53z81nca3d0mh2q3j55zq3wl12"; depends=[]; }; cocoreg = derive2 { name="cocoreg"; version="0.1.1"; sha256="0jrrkak964pl1vih592jgqgl6bw08j0fa1rh3j85x64bqq4m7278"; depends=[abind CCAGFA combinat e1071 ggplot2 glmnet gridExtra MASS multiway pls reshape RGCCA]; }; cocorresp = derive2 { name="cocorresp"; version="0.3-0"; sha256="1r1ssz0cip1gk52nkbr1kpz8gwrg6lwri8ymk41xj2adlsp576v2"; depends=[vegan]; }; cocron = derive2 { name="cocron"; version="1.0-1"; sha256="0dl14y9v9kndy5gzhhbhq3f31ja724y1hra40givy6bij7h2cj30"; depends=[]; }; - coda = derive2 { name="coda"; version="0.19-1"; sha256="14a4a8df4ygj05h37chmdn8kzcqs07fpbflxfrq530563mrza7yl"; depends=[lattice]; }; - coda_base = derive2 { name="coda.base"; version="0.1.9"; sha256="0m4a77l34bk0bwcsvc8654hf5pinf2p7k2223vxkrq5ldylpwqax"; depends=[MASS Rcpp RcppArmadillo]; }; + coda = derive2 { name="coda"; version="0.19-2"; sha256="03fs3sdrrym3is92dgpa6ydk3m63gaihwy7bva4k0wm2hxm7x2k7"; depends=[lattice]; }; + coda_base = derive2 { name="coda.base"; version="0.1.10"; sha256="14qpvwxymgph1zc5f7bskkizq4zilwrl40mjl2j718bpmzk0v4za"; depends=[MASS Rcpp RcppArmadillo]; }; codadiags = derive2 { name="codadiags"; version="1.0"; sha256="1x243pn6qnkjyxs31h1hxy8x852r0fc952ww77g40qnrk8qw79xg"; depends=[coda]; }; - codebook = derive2 { name="codebook"; version="0.5.9"; sha256="12hycq576klq12lqqkwjvxi2k2axl34zs78hfy78mlwlbcgm51gk"; depends=[dplyr DT future ggplot2 haven htmltools knitr labeling likert mice pander psych purrr readr rio rlang rmarkdown skimr stringr tibble tidyr]; }; + codebook = derive2 { name="codebook"; version="0.6.3"; sha256="1ki22x2ngaxg3p7g8jm7d70r17amwgis9ib1nbbfhkp9c6ki6jx9"; depends=[dplyr DT future ggplot2 haven htmltools knitr labeling labelled likert mice miniUI pander psych purrr rio rlang rmarkdown rstudioapi shiny skimr stringr tibble tidyr]; }; codemetar = derive2 { name="codemetar"; version="0.1.6"; sha256="1jjm1c7fkrzyhb57ckdf3d808im5j6c20ykkjsnddh220jy4sgss"; depends=[crul curl desc devtools gh git2r jsonld jsonlite memoise purrr readr sessioninfo stringi stringr tibble usethis whisker]; }; codep = derive2 { name="codep"; version="0.9-1"; sha256="17jziwm56icswa4ngp51ah8w1ma7ij3cksbdaipk0ikqvb5kinkb"; depends=[]; }; codetools = derive2 { name="codetools"; version="0.2-15"; sha256="0h7sjmvvsi35041jp47cxhsqzgf1y8jrw6fxii7n26i8g7nrh1sf"; depends=[]; }; + codified = derive2 { name="codified"; version="0.2.0"; sha256="1hmw7yrw4qx8v9rkqqvqf4013s9whq5qlgwz7v882j4slpvm6gb1"; depends=[checkmate dplyr kableExtra knitr magrittr readr rlang tibble tidyr]; }; codingMatrices = derive2 { name="codingMatrices"; version="0.3.2"; sha256="0kldx2h3mksw4644d0ask6ij7i63rrwk0njlsvkbdjz3bf7pdv1b"; depends=[fractional Matrix]; }; codyn = derive2 { name="codyn"; version="2.0.0"; sha256="1h58w4hb5m8qy7i5h1r7306c5aac1j887aig0imgsjhinj48pi5l"; depends=[assertthat permute vegan]; }; coefficientalpha = derive2 { name="coefficientalpha"; version="0.5"; sha256="0pfw64z7f0gp415nn7519rcw829a7wnwnjx94sc55jsvgb1di3kc"; depends=[lavaan rsem]; }; @@ -5208,8 +5434,9 @@ in with self; { cointmonitoR = derive2 { name="cointmonitoR"; version="0.1.0"; sha256="0rsacvib9prgb199m5ndi0zlgfsvf1giqc5s41wp0yvxdxjdq5lw"; depends=[cointReg matrixStats]; }; colf = derive2 { name="colf"; version="0.1.3"; sha256="1av82yrp6csw7700ymipd02j73cmzn0apv7ykachjw09nzk86kvj"; depends=[nlsr]; }; collUtils = derive2 { name="collUtils"; version="1.0.5"; sha256="0gbk3lrb2lwq2ixrpcngng6qz6axjb4iyqy5606x1zmjm71c060p"; depends=[Rcpp rJava]; }; - collapsibleTree = derive2 { name="collapsibleTree"; version="0.1.6"; sha256="1l02rk1lmm2ac9rr5p1633y1chc203cr9mhlc9s95bv12791i5zb"; depends=[data_tree htmlwidgets]; }; + collapsibleTree = derive2 { name="collapsibleTree"; version="0.1.7"; sha256="0b65pbp1wnpsrayqi630ds4r98jvcvynnlp6wxdqrnnr9nzw5343"; depends=[data_tree htmlwidgets]; }; collectArgs = derive2 { name="collectArgs"; version="0.4.0"; sha256="0fz5w1xsxiddzrwahrg50px4igyhd4plq655jaix6grancs7kvix"; depends=[magrittr]; }; + collections = derive2 { name="collections"; version="0.1.2"; sha256="10crxbbxihcln58j6rlw1kh9qf1njpi0njb7sary80rcfhxwc4w4"; depends=[R6]; }; collpcm = derive2 { name="collpcm"; version="1.0"; sha256="15k6khsgikjpsasyz02bhgd43nij2n7nl0m0sgxvjlcn0nv95y2n"; depends=[latentnet network vegan]; }; colmozzie = derive2 { name="colmozzie"; version="1.1.1"; sha256="0sn7dqg7rnddnmdb10c6scws6kgi1lz4lw8nc698x63z431ah1p8"; depends=[]; }; coloc = derive2 { name="coloc"; version="3.1"; sha256="1321675wz1vn7rcd2sm4c9h183nwnmp0lqww5nykjf792ijyaal8"; depends=[BMA flashClust ggplot2 reshape snpStats speedglm]; }; @@ -5219,18 +5446,19 @@ in with self; { colordistance = derive2 { name="colordistance"; version="1.0.0"; sha256="1z4pa5byk1ag6pqdqi6sn5z6caak4733399gk6zp4wi4kfd9p64a"; depends=[abind ape clue emdist gplots jpeg magrittr mgcv plotly png scatterplot3d spatstat]; }; coloredICA = derive2 { name="coloredICA"; version="1.0.0"; sha256="1xj4dsrwgqzm2644nk3y8nj47m036b4ylh6v60jccj3707spb32r"; depends=[MASS]; }; colorednoise = derive2 { name="colorednoise"; version="1.0.3"; sha256="1idwb4w1r7jpjvrlly8326i4d9lw6bjlmlb591hgwl5xdf4599gi"; depends=[dplyr purrr Rcpp RcppArmadillo tidyr]; }; + colorfindr = derive2 { name="colorfindr"; version="0.1.3"; sha256="0h74075km6hxf9j35iwsd3af0igfpplgjnh3lzgkdqw0shp86iy8"; depends=[bmp dplyr jpeg magrittr pixmap plotly plotwidgets png purrr rsvg stringr tibble tiff treemap]; }; colorfulVennPlot = derive2 { name="colorfulVennPlot"; version="2.4"; sha256="01b3c060fbnap78h9kh21v3zav547ak2crdkvraynpd2096yk51w"; depends=[]; }; colorhcplot = derive2 { name="colorhcplot"; version="1.3.1"; sha256="009pyyb30kwshldd7v7zfy5rxys6i0dhlc5w8ail61acbg4rlrmz"; depends=[]; }; colormap = derive2 { name="colormap"; version="0.1.4"; sha256="0032ji9n8pivl70jppq989fgg781wil8zag7pfl1hs9xrpin8asy"; depends=[ggplot2 stringr V8]; }; colorpatch = derive2 { name="colorpatch"; version="0.1.2"; sha256="18p9hgccp37pbdf437xffkv6z500896v08fsw2jm8zcl9ladygaf"; depends=[colorspace ggplot2 gridExtra TSP]; }; - colorplaner = derive2 { name="colorplaner"; version="0.1.3"; sha256="0mqqk59yjklbc7a0n7jgyhj458622dfdsa1101a5w6kwppbjvnfg"; depends=[digest ggplot2 gtable scales]; }; colorr = derive2 { name="colorr"; version="1.0.0"; sha256="1wwrgb9fc9gzxxwxrdrkwwrmhqqllv29wr4q8y1shj9d3nzcpwmh"; depends=[]; }; - colorscience = derive2 { name="colorscience"; version="1.0.4"; sha256="19943gnzszh13mg74clbkhbc6xg4259ilqk19mrv8d6ml6f6wspl"; depends=[Hmisc munsellinterpol pracma sp]; }; + colorscience = derive2 { name="colorscience"; version="1.0.5"; sha256="0pr28fhv7alvki9f6wncys8lxihsl6q6lr8xffw4fkkgyapnhqxg"; depends=[Hmisc pracma sp]; }; colorspace = derive2 { name="colorspace"; version="1.3-2"; sha256="0d1ya7hx4y58n5ivwmdmq2zgh0g2sbv7ykh13n85c1355csd57yx"; depends=[]; }; colortools = derive2 { name="colortools"; version="0.1.5"; sha256="0z9sx0xzfyb5ii6bzhpii10vmmd2vy9vk4wr7cj9a3mkadlyjl63"; depends=[]; }; colourlovers = derive2 { name="colourlovers"; version="0.2.2"; sha256="0fgxs73l4g1lnmc2q613ykxxrbmvq6w66zpidccqg64wa9cy5yhm"; depends=[jsonlite png XML]; }; colourpicker = derive2 { name="colourpicker"; version="1.0"; sha256="0z3v2083g7kwdp21x9s2n1crfh24agpdq3yxkcdzc2awn2pwpnpi"; depends=[ggplot2 htmltools htmlwidgets jsonlite miniUI shiny shinyjs]; }; - colourvision = derive2 { name="colourvision"; version="2.0.1"; sha256="009nssi996dakjggk64zzmfx9mjdfj04kfy7ds3c9fsb39ynz1ag"; depends=[Matrix rgl]; }; + colourvalues = derive2 { name="colourvalues"; version="0.1.1"; sha256="1ip1linid749h5lv0x1jlndwx57n8qidglcghspdpnvsccl8cm03"; depends=[BH Rcpp]; }; + colourvision = derive2 { name="colourvision"; version="2.0.2"; sha256="15ndhqpp5fi9jgiri9ysl68nf4rdamh9c25svf5nvh2wvv8shrd9"; depends=[Matrix rgl]; }; colr = derive2 { name="colr"; version="0.1.900"; sha256="0ilz1y0jd2vgyh81g3dwx2l64sir6z6sgmqx7lnvr1hafsqnwfc8"; depends=[]; }; colt = derive2 { name="colt"; version="0.1.1"; sha256="028jqvgr14ig8jxp8h2lrf7mainzppgqh6v1479qfv4l9is3bnwy"; depends=[crayon]; }; comato = derive2 { name="comato"; version="1.1"; sha256="0lidwr5vw10655p7q0iqzq3phq5y1i86w3bjdv87cwx3m6333bz6"; depends=[cluster clusterSim gdata igraph lattice Matrix XML]; }; @@ -5241,31 +5469,34 @@ in with self; { comf = derive2 { name="comf"; version="0.1.7"; sha256="1waxapw870fssmy9mzzpslypbal7vanlajzv9ffnsh5w2yzjdpfi"; depends=[plyr]; }; commandr = derive2 { name="commandr"; version="1.0.1"; sha256="1d6cha5wc1nx6jm8jscl7kgvn33xv0yxwjf6h3ar3dfbvi4pp5fk"; depends=[]; }; commentr = derive2 { name="commentr"; version="1.0.4"; sha256="0anlcbk8rj0yr8i23qmr6v5ws0695nkc3mvgr6pnq1fg2d4c4brj"; depends=[stringr]; }; - commonmark = derive2 { name="commonmark"; version="1.5"; sha256="1jwx5rgm0ypd9a3v4jd9za4a644rdzhk1n4dvmgkj9hdpwsida3z"; depends=[]; }; - commonsMath = derive2 { name="commonsMath"; version="1.1"; sha256="0v9jlk75ihh8yjhq5ybighvndp0hn1d6rqh78jkh4g6ylhbpvcw0"; depends=[]; }; - comorbidity = derive2 { name="comorbidity"; version="0.1.1"; sha256="0xb3k2ql3ikdbyx8l73wsrwi62ayapszbrygk8arw1g2n0yqz2f4"; depends=[checkmate]; }; + commonmark = derive2 { name="commonmark"; version="1.6"; sha256="1xymqncf8byqxzpx64zlp6vbx7gry572jkr2ax0zlavr8bli861x"; depends=[]; }; + commonsMath = derive2 { name="commonsMath"; version="1.2"; sha256="1j914f4fqrzp4wwis7i14krsxbdwb2dznzrjdnimy1irs1macyw3"; depends=[]; }; + comorbidity = derive2 { name="comorbidity"; version="0.2.0"; sha256="0imdnd9fxbl0d5vy1ia7844har8k689mvwbqa7pdy3rz9wmp2q3z"; depends=[checkmate stringi]; }; compHclust = derive2 { name="compHclust"; version="1.0-3"; sha256="0agay7rn5mrw07imz4l547b7m9pfcg3rhz4krfxrvg1q2z2kryvj"; depends=[]; }; compactr = derive2 { name="compactr"; version="0.1"; sha256="0f2yds6inmx0lixj08ibqyd2i61l2cbg1ckgpb8dl2q7kcyyd6mx"; depends=[]; }; compare = derive2 { name="compare"; version="0.2-6"; sha256="0k9zms930b5dz9gy8414li21wy0zg9x9vp7301v5cvyfi0g7xzgw"; depends=[]; }; compareC = derive2 { name="compareC"; version="1.3.1"; sha256="0dachfr23lps2jj1y5gc958k54vskmww84gdgk4amihsdgjsnphg"; depends=[]; }; - compareDF = derive2 { name="compareDF"; version="1.5.0"; sha256="0nn8yimmi1yqb5qf4brx7i8zps1mfh6w3gfx3xpsaigk1miik1hb"; depends=[dplyr htmlTable stringr tidyr]; }; + compareDF = derive2 { name="compareDF"; version="1.7.0"; sha256="0gcvhw4rsf9rrx1xb4mv8d5bjvrs51fqgl6vdd8c8jpvdy01q2i5"; depends=[dplyr htmlTable magrittr stringr tidyr]; }; compareGroups = derive2 { name="compareGroups"; version="3.4.0"; sha256="057578433ms4q2xs62zbv36gwx67ihwdlxl243p10y1y7ps335kg"; depends=[epitools gdata HardyWeinberg Hmisc knitr rmarkdown SNPassoc survival xtable]; }; compareODM = derive2 { name="compareODM"; version="1.2"; sha256="019hq8j56asjvh4x1p65785mf38xr05j3by0749gl9k9yl8645da"; depends=[XML]; }; comparer = derive2 { name="comparer"; version="0.1.1"; sha256="1nmvqzrvyxdsidkr243qdn0lj2s7j3jv1sh0mdlxm2v5063nyryr"; depends=[progress]; }; comparison = derive2 { name="comparison"; version="1.0-4"; sha256="0pc462rhk8gr8zrf08ksi315kmhydlp027q5gd40ap5mmhk7rd82"; depends=[isotone]; }; + compboost = derive2 { name="compboost"; version="0.1.0"; sha256="0q7jfj5yc2jvddyyhnzv8fnlmngjfws7cg2blxai76s2fw6bmgxp"; depends=[checkmate glue R6 Rcpp RcppArmadillo]; }; compeir = derive2 { name="compeir"; version="1.0"; sha256="1bb5459wcqpjic2b9kjn0l0qdn7sqmmx34hdb2aqg80q22mhx5dv"; depends=[etm lattice]; }; compendiumdb = derive2 { name="compendiumdb"; version="1.0.3"; sha256="0glaqlzz5wr14yfhka1y7yw5ha6yc4waw61msbz0vkwj5z2hd2hk"; depends=[Biobase GEOquery RMySQL]; }; comperank = derive2 { name="comperank"; version="0.1.0"; sha256="0fxg32kp4v42455fia48rnbd3v84g4vsh4r4qc29d0gg93ymz9hp"; depends=[comperes dplyr Rcpp rlang tibble]; }; - comperes = derive2 { name="comperes"; version="0.2.0"; sha256="0h531xbaidh0ld16q1q4jlx4yshyiczx464x0kkyrrr7ysg527pp"; depends=[dplyr magrittr rlang tibble tidyr]; }; + comperes = derive2 { name="comperes"; version="0.2.1"; sha256="1mi7x7634lxzzpp1z6xq0pbmfq3p63mqy3kvk19xjfbiz3drakw3"; depends=[dplyr magrittr rlang tibble tidyr]; }; compete = derive2 { name="compete"; version="0.1"; sha256="1b1320jw8pcnjkzb0lr8j6d3z7yhlq31gszd79wdcmwnpzap9k0z"; depends=[igraph sna]; }; complexity = derive2 { name="complexity"; version="1.1.1"; sha256="1lpsvry88jpqfw0wkdlwjzkqjl17f4adjcqvq0dwk483mi54xnfk"; depends=[combinat shiny]; }; complexplus = derive2 { name="complexplus"; version="2.1"; sha256="16w9v7d1ckavqmr86l34frr37pkvdn0iqnb17ssb8xaggns5lgqx"; depends=[expm Matrix]; }; complmrob = derive2 { name="complmrob"; version="0.6.1"; sha256="1dr80r1p05h3mlnjbgh6kfw86np8y2bhy9yi5qydv85w52k133n1"; depends=[boot ggplot2 robustbase scales]; }; compoisson = derive2 { name="compoisson"; version="0.3"; sha256="0v5dl7xydqi4p97nipn4hyhpq2gghmx81ygvl0vc8b65jhq89y0p"; depends=[MASS]; }; compositions = derive2 { name="compositions"; version="1.40-2"; sha256="12mp05yi7jkdqg9iwh6bc9sx6sdxagcnrirznxy9hq8502p7238i"; depends=[bayesm energy robustbase tensorA]; }; - compound_Cox = derive2 { name="compound.Cox"; version="3.12"; sha256="143a0vgv86n1pz6442r7nk7hh04brz1x3na8msnm9njxf0qqjwpm"; depends=[numDeriv survival]; }; + compound_Cox = derive2 { name="compound.Cox"; version="3.14"; sha256="118s0j8xkv0fk8hvzfyw2dwkh76ky5k98dnh92vh6akcz1wm0iam"; depends=[numDeriv survival]; }; compute_es = derive2 { name="compute.es"; version="0.2-4"; sha256="1b5i8z66zbag0vdv98mmpwmizpm68vc3ajh0n3q94zdcmhcbx12d"; depends=[]; }; - comtradr = derive2 { name="comtradr"; version="0.2.1"; sha256="0l14qwvnzll98jp235ip6skmr3fdr1y5niqjwhz9nyk8spfbyvp1"; depends=[httr jsonlite magrittr purrr]; }; + comtradr = derive2 { name="comtradr"; version="0.2.2"; sha256="177gnmgwqns65z5y9nw4xp8qmw5z70454zb54jw1879xrgfsrciz"; depends=[httr jsonlite magrittr purrr]; }; + con2aqi = derive2 { name="con2aqi"; version="0.1.0"; sha256="1gdd1y6xg26fz199hvryzsnp16qbsz13chqqxyxnkgrai1l72mhf"; depends=[]; }; + conStruct = derive2 { name="conStruct"; version="1.0.1"; sha256="1b20r2a2xn3fwa131sk6gdhpxw79g6316fws12iph2vw0lp0gyka"; depends=[BH caroline doParallel foreach gtools Rcpp RcppEigen rstan rstantools StanHeaders]; }; concatenate = derive2 { name="concatenate"; version="1.0.0"; sha256="1kvsw7vwa3hn97ff7r6z21h5ajs74azwv2dk4pzgyaasnbp778hw"; depends=[]; }; concaveman = derive2 { name="concaveman"; version="1.0.0"; sha256="0b6a37h4k3p879gp4qp3297q0fzq3yn79yhkwjrcxhcl86sg5nb6"; depends=[dplyr jsonlite magrittr sf V8]; }; conclust = derive2 { name="conclust"; version="1.1"; sha256="1k9y1mniy7s51dmm5ia693k72s2vxk5bznxxf74s7mx9n3mg2i8r"; depends=[]; }; @@ -5281,22 +5512,22 @@ in with self; { conditions = derive2 { name="conditions"; version="0.1"; sha256="0vhqkbsil3qfvrz7924i3wvjknw69cp27g7ayapf6w94bbggx4x8"; depends=[]; }; condmixt = derive2 { name="condmixt"; version="1.0"; sha256="05q1fj7akf6lsq9rbcqqkzlx82jvk6mlvmwx6jzk8j228fwqmg90"; depends=[evd]; }; condusco = derive2 { name="condusco"; version="0.1.0"; sha256="0zydinzlksynkz4r712rzv9qqdx8dkdz3h1ygi9cfmd6hya3580s"; depends=[assertthat bigrquery DBI jsonlite]; }; - condvis = derive2 { name="condvis"; version="0.4-2"; sha256="0l515wpsmh7g4q4w29gb1gv5kafwzfhb8as0ml8vbbrh6xcgmz9q"; depends=[MASS]; }; + condvis = derive2 { name="condvis"; version="0.5-1"; sha256="1ngxqfa0mr86cv610da4ljypxpdvx0n5pfgj3zfksnwxlwc0dvbj"; depends=[MASS]; }; coneproj = derive2 { name="coneproj"; version="1.14"; sha256="0km7njsxjgrv4d8bx709nci59ngm00jg1r55702yapyjl0f2zg93"; depends=[Rcpp RcppArmadillo]; }; - conf = derive2 { name="conf"; version="1.2"; sha256="1xk3b94k73msj2mykxr0b9q472biz40qnckkym82b4vqmga1c0rs"; depends=[SDMTools STAR statmod]; }; + conf = derive2 { name="conf"; version="1.3.3"; sha256="0hankl9grc149r82v93iwrk6hf19n5ipay80cc9zv034wv2249w1"; depends=[SDMTools STAR statmod]; }; conf_design = derive2 { name="conf.design"; version="2.0.0"; sha256="06vdxljkjq1x56xkg041l271an1xv9wq79swxvzzk64dqqnmay51"; depends=[]; }; confSAM = derive2 { name="confSAM"; version="0.2"; sha256="1l67ndya07hh0yqfbabfhsvp3hryklx0022grpr0cb7ff88d1zam"; depends=[]; }; confidence = derive2 { name="confidence"; version="1.1-2"; sha256="0m6iz59n5jpi0ig3za3nir4d4bdsysf5g47d2nakfmaz03wk520z"; depends=[ggplot2 knitr markdown plyr xtable]; }; config = derive2 { name="config"; version="0.3"; sha256="0l67nfpm42ssnk0bl4jmq6bibz8hawgfgh2s14s5c8mnimv6mpjs"; depends=[yaml]; }; configr = derive2 { name="configr"; version="0.3.3"; sha256="08fa04sjh2k6mbv998bp6cd7rh47j0ic3bcqdhr7zqlbd1g670x2"; depends=[glue ini jsonlite RcppTOML stringr yaml]; }; confinterpret = derive2 { name="confinterpret"; version="1.0.0"; sha256="0qldaqpx7kpk71zfwv465jrscwzc9w3xfv52i4h01k9aw3q6m8ja"; depends=[]; }; - conflicted = derive2 { name="conflicted"; version="0.1.0"; sha256="0dai0dvb3sbnjspg5wdwm4j5d11xkmrvpjjxpzb7s70d8wp4c72h"; depends=[rlang]; }; + conflicted = derive2 { name="conflicted"; version="1.0.1"; sha256="0hj9dvyi59y917cac1d3g1bgaghs40nr71z3y2msr29q01d1sqkp"; depends=[memoise rlang]; }; conformalClassification = derive2 { name="conformalClassification"; version="1.0.0"; sha256="03v6xbgipb97byarqj0d38z9yb2g54mkkw343jxmi2j058z26yw7"; depends=[doParallel foreach mlbench randomForest]; }; confreq = derive2 { name="confreq"; version="1.5.1"; sha256="0gy6d1kffb1w86ifldswb9krxyc2p646g9yjlfm1h243qlp52sfa"; depends=[gmp]; }; congressbr = derive2 { name="congressbr"; version="0.1.3"; sha256="1c29nqnhiyr9y2hs5lwpqa7c54qcqfr74l5mzh13dlccz3zsm2p1"; depends=[dplyr httr lubridate magrittr pscl purrr stringi stringr tibble tidyr xml2]; }; conicfit = derive2 { name="conicfit"; version="1.0.4"; sha256="1d704xgiyqmbwfxnsmhqg885x10q8yqxmrk4khqpg3lh696bw97d"; depends=[geigen pracma]; }; conics = derive2 { name="conics"; version="0.3"; sha256="06p6dj5dkkcy7hg1aa7spi9py45296dk0m6n8s2n3bzh3aal5nzq"; depends=[]; }; - conjoint = derive2 { name="conjoint"; version="1.39"; sha256="0f8fwf419js9c292i3ac89rlrwxs2idhwxml1qd8xd2ggwfh6w5m"; depends=[AlgDesign clusterSim]; }; + conjoint = derive2 { name="conjoint"; version="1.41"; sha256="1iq3226a6fn1gddmh2nxlzvjcvbj7502r9520g9d4xdmk8smfx33"; depends=[AlgDesign broom cluster fpc ggfortify ggplot2]; }; conover_test = derive2 { name="conover.test"; version="1.1.5"; sha256="0f1p10klidk1xic1wd48j9rjh2fb3z6pfjx4y021lglx1w3av68k"; depends=[]; }; constants = derive2 { name="constants"; version="0.0.2"; sha256="1j9d52riwx7v1ppfdw0x517j7xh92qgskd4mj5yk9qa233brcwyy"; depends=[]; }; constellation = derive2 { name="constellation"; version="0.2.0"; sha256="1d49rnyf2z3bvx158nsmgmb0x7xcgxl9f8y98pwg5wlqck7af99q"; depends=[data_table]; }; @@ -5310,14 +5541,14 @@ in with self; { controlTest = derive2 { name="controlTest"; version="1.1.0"; sha256="19r8nvi35ldzgayifskjj706fv76hv6sj68yvggybp27rgyqbjfl"; depends=[survival]; }; convertGraph = derive2 { name="convertGraph"; version="0.1"; sha256="1jsrygj6ydzc0nzyzaq95j4blqavj7dqz182vgm1ckv8an3if0jx"; depends=[]; }; convertr = derive2 { name="convertr"; version="0.1"; sha256="1y9aq5in2qv1323amblmq3g22flpqvpkgkrw12kahg56mqf2b3iq"; depends=[DT miniUI rstudioapi shiny]; }; - convevol = derive2 { name="convevol"; version="1.1"; sha256="1d9h2vjzfmnbm4aprbvhndgjh85zp3j1hssm9082nw7zb9ycxs1s"; depends=[ape cluster geiger MASS phytools]; }; + convevol = derive2 { name="convevol"; version="1.2"; sha256="106x3qj5m8flcq4ixrvh0fv0kkcc7595ym4bg9dxjhdx4v0zhnbg"; depends=[ape cluster geiger MASS phytools]; }; convexjlr = derive2 { name="convexjlr"; version="0.7.0"; sha256="1dxvz5jnflswqh7iqc4fw7gbp8s6qn7rfy2b5qx4jklrvfj696yj"; depends=[JuliaCall magrittr XRJulia]; }; convey = derive2 { name="convey"; version="0.2.1"; sha256="1fcfzcpiy35xr2i81q002h07zf8gvbv1m5is7j475bi13666ynzh"; depends=[survey]; }; convoSPAT = derive2 { name="convoSPAT"; version="1.2.4"; sha256="0by1z2z7gzycwrll1agkqnpn5h5cjr6b62gpwy11wl4lh48p4213"; depends=[ellipse fields geoR MASS plotrix StatMatch]; }; cooccur = derive2 { name="cooccur"; version="1.3"; sha256="1wlaghhi4f3v8kzwhcgq3c6as7v3zlpkzhb232qz1amr7f0058kv"; depends=[ggplot2 gmp reshape2]; }; cooccurNet = derive2 { name="cooccurNet"; version="0.1.6"; sha256="1vqfmvjrxxn977jrry47wn4lag4yi4bkyxwlis3n1ly39kkmyh2j"; depends=[bigmemory doParallel foreach igraph knitr Matrix pryr seqinr]; }; coop = derive2 { name="coop"; version="0.6-1"; sha256="1hr78w7qlslpwnrz9mk6w4p5qa8sxhkzans5givy5hf9qkykn0dp"; depends=[]; }; - coopProductGame = derive2 { name="coopProductGame"; version="1.0"; sha256="0vzx9f6za2zms9sda8p19gcmp4g6y87p91ydybjv8lz9na8hl3ix"; depends=[dplyr GameTheory ggplot2 gtools kappalab lpSolveAPI]; }; + coopProductGame = derive2 { name="coopProductGame"; version="2.0"; sha256="1348pgqfvvysdixsjibgkvwjsmqasnlmwf9kyr39lw8jb81z25h0"; depends=[dplyr GameTheory ggplot2 gtools kappalab lpSolveAPI]; }; cooptrees = derive2 { name="cooptrees"; version="1.0"; sha256="0izvwna1jsqik3v5fz1r4c86irvma42clw0p4rdvwswv5pk698i1"; depends=[gtools igraph optrees]; }; copBasic = derive2 { name="copBasic"; version="2.1.0"; sha256="16iax25jzm9613i2ml5d4xjknhycallrbcxhrsrsp8znlclbglqs"; depends=[lmomco randtoolbox]; }; copCAR = derive2 { name="copCAR"; version="2.0-2"; sha256="032gphv64v2mmy63q86qgpa31i36ix6fkjsdxmzgqyxcyzgb0jcy"; depends=[mcmcse numDeriv Rcpp RcppArmadillo spam]; }; @@ -5326,7 +5557,7 @@ in with self; { coprimary = derive2 { name="coprimary"; version="1.0"; sha256="0pjln9p5lzv6wl5xrz0kb90hnjlnp7ch2kvh054nxdbmlxv5akc3"; depends=[digest gsDesign plyr proto]; }; copula = derive2 { name="copula"; version="0.999-18"; sha256="1xdjnp8zgla2hixyp524nvgbji0jcrmqc4j99hr8xp9365xb6z86"; depends=[ADGofTest colorspace gsl lattice Matrix mvtnorm numDeriv pcaPP pspline stabledist]; }; copulaData = derive2 { name="copulaData"; version="0.0-1"; sha256="1s917g8wasxndg1xq4b4fjaq29nyzzigpflgqcy4rxdb7r54dl0z"; depends=[]; }; - copulaedas = derive2 { name="copulaedas"; version="1.4.2"; sha256="09w6b1m1lnlnsx0qp2mzlp0z9rxzz90qs9jqzwwjl56lzdad3vpr"; depends=[copula mvtnorm truncnorm vines]; }; + copulaedas = derive2 { name="copulaedas"; version="1.4.3"; sha256="01wp8jnz7kndknj7lh9ia7mm41k1vbaksalyy9v19bb77yhgzmba"; depends=[copula mvtnorm truncnorm vines]; }; corHMM = derive2 { name="corHMM"; version="1.22"; sha256="03di9250hjn5fiwn47f0pr4zprmsza4if3xpmy3j1czahc8zlqnj"; depends=[ape corpcor expm GenSA nloptr nnet numDeriv phangorn Rmpfr]; }; corTest = derive2 { name="corTest"; version="0.9.6"; sha256="1ccb38jyl2nyff2m71pba7vs13nl59zzpdnc7k68333dd8p7zswa"; depends=[MASS]; }; corTools = derive2 { name="corTools"; version="1.0"; sha256="0arvqk2xp19ap73zmdk0kb1fycb3v2mf65b4bhanvcqwr4kg4vdk"; depends=[]; }; @@ -5341,7 +5572,7 @@ in with self; { corkscrew = derive2 { name="corkscrew"; version="1.1"; sha256="1nb81r4lsrajcj3xz3f7p6xznnb38yg3rnnh44rd3kabca4d8r1s"; depends=[ggplot2 gplots igraph RColorBrewer]; }; corlink = derive2 { name="corlink"; version="1.0.0"; sha256="06n9pcvbn8y9gy0mn9c0sw05424ss8smpaw3ly6a785cmj3d9b6m"; depends=[]; }; corpcor = derive2 { name="corpcor"; version="1.6.9"; sha256="1hi3i9d3841snppq1ks5pd8cliq1b4rm4dpsczmfqvwksg8snkrf"; depends=[]; }; - corpora = derive2 { name="corpora"; version="0.4-3"; sha256="0zh8mabfy9yqgx7asi4yqv4c0kj59yvyxxaxjgdjy5kkr17zd4g4"; depends=[]; }; + corpora = derive2 { name="corpora"; version="0.5"; sha256="0b4yw37msx9h8hf5mjs4h10gdmc1qc2gv5bzyj1r90n4gcli042d"; depends=[]; }; corpus = derive2 { name="corpus"; version="0.10.0"; sha256="0c984rsnbai2qrm2s10lkdfgx31m0ax46zhl74bns2bxfmagcn3l"; depends=[utf8]; }; corpustools = derive2 { name="corpustools"; version="0.3.3"; sha256="1hgcwnjhqfyylvqcy2j5f2k6chwyybnx38vzzvq62s6qf6p9p7by"; depends=[data_table Matrix memoise plyr R6 Rcpp SnowballC stringi udpipe wordcloud]; }; corr2D = derive2 { name="corr2D"; version="0.2.0"; sha256="02z9k0j6j8jyjfgff55amkzsa5w0xbr9nqm1247qylsh8sl2rqcz"; depends=[colorspace doParallel fields foreach mmand rgl]; }; @@ -5349,20 +5580,21 @@ in with self; { correctedAUC = derive2 { name="correctedAUC"; version="0.0.3"; sha256="0c2kq7asq5mp48p8niqb84wnw4q2q2985wxbrywrhsszm9p3xspb"; depends=[ICC mnormt]; }; corregp = derive2 { name="corregp"; version="2.0.2"; sha256="1v048dibn2x3y5mi2damcsr9i5kdig5n53g5j9gf31lqkzzjmnh3"; depends=[data_table diagram ellipse gplots rgl]; }; correlbinom = derive2 { name="correlbinom"; version="0.0.1"; sha256="1ix3ccxzr7vqblbda5awsva3h95b69v7kc6adz622bbi8r36xxcq"; depends=[Rmpfr]; }; - corrgram = derive2 { name="corrgram"; version="1.12"; sha256="1z0h2mkf4805w3wnhy31cf1gm9miliapxchgc4ksg3kx2799gv91"; depends=[seriation]; }; + corrgram = derive2 { name="corrgram"; version="1.13"; sha256="1g5159vihsz5a2cfmg4g4i1lildn2x2wzck5sd0vml5810rxjpma"; depends=[seriation]; }; corrplot = derive2 { name="corrplot"; version="0.84"; sha256="1k03qd8db7pwg1v318xapx5mpiypiz2n07qr19c4b45diri5xkhd"; depends=[]; }; - corrr = derive2 { name="corrr"; version="0.2.1"; sha256="1d04nk92fjmk4kc5zipjqjhhmb1w97kid7l2jz5a8pkwiccn5byc"; depends=[dplyr ggplot2 ggrepel lazyeval magrittr purrr seriation tibble tidyr]; }; + corrr = derive2 { name="corrr"; version="0.3.0"; sha256="1l5157m4k5zvxnkgndvkxc0ghcsgxvm5jr6hpbpdc6s1nnz7s027"; depends=[dplyr ggplot2 ggrepel lazyeval magrittr purrr rlang seriation tibble tidyr]; }; corrsieve = derive2 { name="corrsieve"; version="1.6-8"; sha256="0ak3j9khcwv5rxbicck2sr260wpmd3xj254y7pdavx2fk0b72yxs"; depends=[]; }; corset = derive2 { name="corset"; version="0.1-4"; sha256="0ladyqvkys4cldvbhkii9jwn1k5p1ym2g5bgdlz1hq1sv30ixn2f"; depends=[]; }; cosa = derive2 { name="cosa"; version="1.2.0"; sha256="1g2n9l79bi6pr5m9f4c0byw2ls9nhykkaaivssxbx4m6qpqlqg54"; depends=[nloptr]; }; cosinor = derive2 { name="cosinor"; version="1.1"; sha256="02nnqg51vq48lzk667cyarnmhcf5mifnsdij7dlgqvz2k4fdq4pl"; depends=[ggplot2 shiny]; }; - cosinor2 = derive2 { name="cosinor2"; version="0.1.0"; sha256="0pxkkp8dxhzqp2v3pfzigh1ka7ardf168k5p41z289xgar9p33g0"; depends=[cosinor ggplot2 Hmisc matrixStats]; }; + cosinor2 = derive2 { name="cosinor2"; version="0.2.1"; sha256="1pp0z86fflqkkllfrzx3vj98kzxjwnawr4a2d8z5q6zhq6v5qrvf"; depends=[cosinor cowplot ggplot2 Hmisc magrittr matrixStats purrr scales stringr]; }; cosmoFns = derive2 { name="cosmoFns"; version="1.0-1"; sha256="0a6xhbgxxnymlvicg99yhgny2lscxcbmvqmy17kxmahdi797dsg6"; depends=[]; }; cosso = derive2 { name="cosso"; version="2.1-1"; sha256="1wyq27qak0kz4bbzynm24r5ksvb6ddd43h2ykh6m935xck16blyb"; depends=[glmnet quadprog Rglpk]; }; costat = derive2 { name="costat"; version="2.4"; sha256="0c47bklqjgjmdglw3mi9lvygwjr5w6i1zv91ll3vpnl5dnay0692"; depends=[wavethresh]; }; cotrend = derive2 { name="cotrend"; version="1.0.1"; sha256="14yzfq5a3wi26gn45mp2zm2yn6gic90csk9by66m08fgpzznz4dq"; depends=[xts]; }; couchDB = derive2 { name="couchDB"; version="1.4.1"; sha256="1n99amvnsjp88y091603hjsvp243c5i6dbrsvdjfmzgj5dsrv70m"; depends=[bitops httr RCurl rjson]; }; - countrycode = derive2 { name="countrycode"; version="1.00.0"; sha256="1b2ijbf74bxvi01f53lbb2b9jya2rlyazvzacxpj79y1dbs600s6"; depends=[]; }; + countgmifs = derive2 { name="countgmifs"; version="0.0.1"; sha256="19d8xr7ipqp16w46c3mrg15jfcvpj7n4pds8zw6mgw4g81bcxamf"; depends=[MASS]; }; + countrycode = derive2 { name="countrycode"; version="1.1.0"; sha256="1pmv2jxr1ydgv8r5n20s5z80hdmzgvhm4cxdqhbkf7nfyipwl8xl"; depends=[]; }; countyfloods = derive2 { name="countyfloods"; version="0.1.0"; sha256="0ld8p8dfk9khvwffbn8sad0j3an25s7cvbi6jxljgx4zc6ldh699"; depends=[dataRetrieval dplyr ggplot2 lubridate maps plyr R_utils tidyr]; }; countytimezones = derive2 { name="countytimezones"; version="1.0.0"; sha256="0sk22fmz9d3wvlfvjl1xdavvl04q1ywy8ww2gi5am3yiizkf0v9w"; depends=[dplyr lubridate]; }; countyweather = derive2 { name="countyweather"; version="0.1.0"; sha256="0q56bnh9x6jyj1sdd1q4yv2n774mbv268pgp285bjybgqm2pyisz"; depends=[dplyr geosphere ggmap ggplot2 lubridate purrr raster rnoaa sp stringi tibble tidyr tigris]; }; @@ -5370,18 +5602,18 @@ in with self; { covLCA = derive2 { name="covLCA"; version="1.0"; sha256="15jsjrlaws1cqyrwvh4lzbhxkb11jmgpmddg98nfrzmjpczn2iw3"; depends=[Matrix mlogit poLCA]; }; covRobust = derive2 { name="covRobust"; version="1.1-3"; sha256="0zcfala4l0j4w0sx5hlw40vxiypans3d7pgkxy25nj0d2m1jkvba"; depends=[]; }; covTest = derive2 { name="covTest"; version="1.02"; sha256="0p4di8bdjghsq5jd678dprlhiwnxr5piqlx2z7hi2bjjpvvl5657"; depends=[glmnet glmpath lars MASS]; }; - covTestR = derive2 { name="covTestR"; version="0.1.3"; sha256="13sjnc3yrh2hzdcnnh6sfzl8gqilarg79n0sjr8vqyvclmz686k0"; depends=[dplyr lazyeval Rcpp RcppArmadillo]; }; - covafillr = derive2 { name="covafillr"; version="0.4.2"; sha256="00790rgpdxxwc48cw0w5savvmvi8ljmyrh6w3f8qzx6pq1s982gm"; depends=[ggplot2 RcppEigen]; }; - covatest = derive2 { name="covatest"; version="1.0.0"; sha256="0g4wfwxngvcssi2bmmb2q5fv909z9qm4wfc8gcldz7fckbsc0k10"; depends=[gstat matrixcalc sp spacetime]; }; + covTestR = derive2 { name="covTestR"; version="0.1.4"; sha256="0j9kay8lwkhpdyg0fbfars1m58v0i58v1v5sm7m72s7kz8qh2yfs"; depends=[purrr Rcpp RcppArmadillo rlang]; }; + covafillr = derive2 { name="covafillr"; version="0.4.3"; sha256="0mqq4hm3nhzrvdai9blb0ycgm6j5klfd8y4ib5pl99plffs6r7pl"; depends=[RcppEigen]; }; + covatest = derive2 { name="covatest"; version="1.0.1"; sha256="01dn2jbfiy7fwlm6zg44cvb2475kaa4l8snl1xara3qp0xiikhvr"; depends=[gstat matrixcalc sp spacetime]; }; covequal = derive2 { name="covequal"; version="0.1.0"; sha256="1qj6djqf1rnjmnaz1nryj9dc104082w258dzjjp5q18gg1ck8v0c"; depends=[corpcor RMTstat]; }; covfefe = derive2 { name="covfefe"; version="0.1.0"; sha256="178qc77y4bn04qad3g70wr8y4v0ggyg807w67m8wvhbcxqr8yq7c"; depends=[tokenizers]; }; - covr = derive2 { name="covr"; version="3.1.0"; sha256="0ml7hpnwn0b4rgk0qx0pchz1m5b57issbvhl708lnb0bplvf00f7"; depends=[crayon digest httr jsonlite rex withr]; }; + covr = derive2 { name="covr"; version="3.2.1"; sha256="187hvqp7mvxy3hl00fgw56sm93yrz81fwixf652arr0ih2jdm47a"; depends=[crayon digest httr jsonlite rex withr]; }; covreg = derive2 { name="covreg"; version="1.0"; sha256="0v19yhknklmgl58zhvg4szznb374cdh65i7s8pcj2nwrarycwzaq"; depends=[]; }; covsep = derive2 { name="covsep"; version="1.1.0"; sha256="19dvwhl85yx9ddwxvnq5sdd534s6llcw61gckrav48hq49x1bqld"; depends=[mvtnorm]; }; cowbell = derive2 { name="cowbell"; version="0.1.0"; sha256="1zz0g30zvqfk5lh09y90iq3s7x2wwbs852i3d56mfp926gxdxc2y"; depends=[ggplot2 misc3d rgl]; }; - cowplot = derive2 { name="cowplot"; version="0.9.2"; sha256="13yjw7yv7imyqiawqqp304hkp6x36iv6rf6gn03dwzwkj9zwx4lb"; depends=[ggplot2 gtable plyr scales]; }; - cowsay = derive2 { name="cowsay"; version="0.6.0"; sha256="15kiiqbh8bqdifbjh6ab9r595j2a4zyk4mgmy1w39sja1g95nlvi"; depends=[fortunes rmsfact]; }; - coxed = derive2 { name="coxed"; version="0.1.1"; sha256="1fk9vcrad8p2xdm1q7wcrd2fk9b59cfs3lvfxi8arkmmbz7pxrmq"; depends=[dplyr ggplot2 gridExtra mgcv PermAlgo rms survival tidyr]; }; + cowplot = derive2 { name="cowplot"; version="0.9.3"; sha256="1jrx1h0blkk577y4cvnjk7xccn7qmjiv2bnpgqlsjvjhsxglf41y"; depends=[ggplot2 gtable plyr scales]; }; + cowsay = derive2 { name="cowsay"; version="0.7.0"; sha256="1f5hc1sj79yd3l2c6vrcj6xx2hdfxb16c3d2sgr7yps8j5fyrb9h"; depends=[crayon fortunes rmsfact]; }; + coxed = derive2 { name="coxed"; version="0.2.0"; sha256="0idr6ic8nsw6f210swvpfzbaf05blg4x6kh6mb7q773qirmwi0rs"; depends=[dplyr ggplot2 gridExtra mgcv PermAlgo rms survival tidyr]; }; coxinterval = derive2 { name="coxinterval"; version="1.2"; sha256="0vb7vmzbb2dsihx04jbp2yvzcr033g435mywmwimqhfqdrmjx3fi"; depends=[Matrix survival timereg]; }; coxme = derive2 { name="coxme"; version="2.2-10"; sha256="12p41qc3ryxdcw2zljgvw2gk1wl1pj7h61naqbyc1h0l3dqy8dg2"; depends=[bdsmatrix Matrix nlme survival]; }; coxphMIC = derive2 { name="coxphMIC"; version="0.1.0"; sha256="0lmma5wzcczr762xqa4yamvwvyviqxk8gdrps3sydg3n14hckp6d"; depends=[numDeriv survival]; }; @@ -5389,6 +5621,7 @@ in with self; { coxphf = derive2 { name="coxphf"; version="1.13"; sha256="16bman8xv5xx7gg8s54sj3hc4isqxk4h3q93h4q3h3j0bdvww2yy"; depends=[survival]; }; coxphw = derive2 { name="coxphw"; version="4.0.1"; sha256="116dp6zispa8k7y6jrn4v9ipf0jqdhj68w9qqc2qwcapawvrd0nh"; depends=[survival]; }; coxrobust = derive2 { name="coxrobust"; version="1.0"; sha256="08hp0fz5gfxgs3ipglj6qfr6v63kzxkrzg650bmzabq8dvrxd97q"; depends=[survival]; }; + coxrt = derive2 { name="coxrt"; version="1.0.0"; sha256="1nyc4qpgxyji314w372rg7dhiq6bmzfjbgi035m350s81fp6y8br"; depends=[BB ggplot2 gss inline Rcpp RcppArmadillo survival]; }; coxsei = derive2 { name="coxsei"; version="0.1"; sha256="1agr0gmyy1f2x6yspj04skgpi1drpbc1fcbwhhhjsz1j6c64xagy"; depends=[]; }; cp4p = derive2 { name="cp4p"; version="0.3.5"; sha256="16pkl0brm415v153ln41nyy13fsp4i0jy8349lsffkv5mvp7vklc"; depends=[limma MESS multtest qvalue]; }; cpa = derive2 { name="cpa"; version="1.0"; sha256="14kcxayw4cdbjfa6bvfzqp8flwc0sr3hmh2dnr1dfax0hnccd71m"; depends=[]; }; @@ -5412,35 +5645,40 @@ in with self; { cranlogs = derive2 { name="cranlogs"; version="2.1.0"; sha256="1w1nbifjb9l106fk97zy0w73x73bw5azq89l3c1b8r2fz8aljkkc"; depends=[httr jsonlite]; }; cranly = derive2 { name="cranly"; version="0.2"; sha256="0h6yfj805kbprgj28x43iz6lcjsv39vxdf33j9gg2gnmgr5zja67"; depends=[colorspace countrycode ggplot2 igraph magrittr stringr visNetwork]; }; crantastic = derive2 { name="crantastic"; version="0.1"; sha256="0y2w9g100llnyw2qwjrib17k2r2q9yws77mf6999c93r8ygzn4f5"; depends=[]; }; - crawl = derive2 { name="crawl"; version="2.1.1"; sha256="0dr9z8y8rvc3wn1gjb6mh5wmszng9j1r2a9ks6p5am8ghf754sps"; depends=[dplyr gdistance mvtnorm raster Rcpp RcppArmadillo shiny sp]; }; + crawl = derive2 { name="crawl"; version="2.2.1"; sha256="18mr7vp72jj5msj9mbq45jy3f6qhn45azsmkq07i2d30gwdj0c3a"; depends=[dplyr gdistance lubridate magrittr mvtnorm purrr raster Rcpp RcppArmadillo rmapshaper sf shiny sp tibble]; }; crayon = derive2 { name="crayon"; version="1.3.4"; sha256="0s7s6vc3ww8pzanpjisym4jjvwcc5pi2qg8srx7jqlz9j3wrnvpw"; depends=[]; }; crblocks = derive2 { name="crblocks"; version="0.9-1"; sha256="1m6yy6jb1dld7m9jaasms5ps8sn3v039jvlk8b0c08hmm7y0rm3z"; depends=[]; }; crch = derive2 { name="crch"; version="1.0-1"; sha256="0h97vr9sy7hncjxv5v3y79pw2qqzpx6z6nqgx6k2ics1lf9misyb"; depends=[Formula ordinal sandwich scoringRules]; }; creditr = derive2 { name="creditr"; version="0.6.1"; sha256="1dhjl99gjc97bdsdg29mq6xifivjn9kr0y7m2jzvrzb26x856z97"; depends=[devtools quantmod Rcpp RCurl XML xts zoo]; }; credsubs = derive2 { name="credsubs"; version="1.0"; sha256="12bs1whk23y41hxa976j30d31x81rmxapz9ll5y2hi5c1h4fypn4"; depends=[]; }; credule = derive2 { name="credule"; version="0.1.3"; sha256="1vciqkxkf93z067plipvhbks9k9sfqink5rhifzbnwc2c5gxp5mx"; depends=[]; }; + cregg = derive2 { name="cregg"; version="0.3.0"; sha256="08dhn4i5i27zw3ayqp7lkw5z8dzckv8fhflpvz0mphax34pm3z72"; depends=[ggplot2 ggstance lmtest sandwich scales survey]; }; + crfsuite = derive2 { name="crfsuite"; version="0.2"; sha256="10d7gahqqc6g6l99n6g5r49hlngdl3k9jz9j2c4x9hx1r8f8gql6"; depends=[data_table Rcpp]; }; cricketr = derive2 { name="cricketr"; version="0.0.15"; sha256="0jf9a8kfhzydmspmgh2mxb18q4adbjm3jiz3brxpl42d64agq7qj"; depends=[dplyr forecast ggplot2 lubridate plotrix scatterplot3d XML]; }; crimCV = derive2 { name="crimCV"; version="0.9.6"; sha256="14ckk88i7jk8a7kl51d7qfdis44jng6zz9zd72cdp80a57dvrvzq"; depends=[]; }; + crimedata = derive2 { name="crimedata"; version="0.1.0"; sha256="006wz4nvfq10dppkg8kqp2bmllcc7zpwdqkp3nqwm4qgw7pllyvz"; depends=[digest dplyr httr magrittr purrr readr stringr tibble]; }; crimelinkage = derive2 { name="crimelinkage"; version="0.0.4"; sha256="1zzk50kyccvnp51vzp28c9yi23hsp25arrgdn88lwfwa0m43rlar"; depends=[geosphere igraph]; }; crisp = derive2 { name="crisp"; version="1.0.0"; sha256="1gs8jnd9y9pd55w6kwv9mvmg3wd8hjiw3lwx7k242pxccsxklfxq"; depends=[MASS Matrix]; }; crmPack = derive2 { name="crmPack"; version="0.2.7"; sha256="1d0ydllcbykwip9dw3arvn6lv4h88n5nkm3ms122gfrf44f6h2c0"; depends=[GenSA ggplot2 gridExtra MASS mvtnorm rjags]; }; - crminer = derive2 { name="crminer"; version="0.1.4"; sha256="1vnl01q5sw13g6qhvn61w9i40zpg9cszisgi0h8d6q6rr23iws9w"; depends=[crul hoardr jsonlite pdftools xml2]; }; + crminer = derive2 { name="crminer"; version="0.2.0"; sha256="1rlh7bxk8bry2v9fnqzy0ph62dda1pzifksr7v4pmdyhji9mjw33"; depends=[crul hoardr jsonlite pdftools xml2]; }; crmn = derive2 { name="crmn"; version="0.0.20"; sha256="1kl1k1s2gm63f9768cg8w4j6y1gq4hws3i7hdfhj7k9015s0a25p"; depends=[Biobase pcaMethods]; }; crn = derive2 { name="crn"; version="1.1"; sha256="1fw0cwx478bs6hxidisykz444jj5g136zld1i8cv859lf44fvx2d"; depends=[chron RCurl]; }; - crochet = derive2 { name="crochet"; version="2.0.1"; sha256="1il29hnnx3kwjvsnirvm5vxdd04x94qn4526411cw0syyqqlbnp8"; depends=[]; }; + crochet = derive2 { name="crochet"; version="2.1.0"; sha256="0bfhgkbyrm836wjshlv1gxkc7m84sij6i3zrg95q4fmqzspwqnq0"; depends=[]; }; + cromwellDashboard = derive2 { name="cromwellDashboard"; version="0.5.1"; sha256="0d57c1wdd1ds9fr7p256la63qbv8mirljgrvl1k8fp5gcnkps5wb"; depends=[dplyr DT httr shiny shinydashboard stringr]; }; cronR = derive2 { name="cronR"; version="0.4.0"; sha256="0ydlwhlzb57vbr8ya6hdsw2mhsjkb01jspn0jw081anrxfy5m2jw"; depends=[digest]; }; crop = derive2 { name="crop"; version="0.0-2"; sha256="1yjpk7584wrz9hjqs21irjnrlnahjg8lajra9yfdp6r927iimg1l"; depends=[]; }; cropdatape = derive2 { name="cropdatape"; version="1.0.0"; sha256="19bn0apx4p8hnz388zg7sq59qv89vv8k5php317kcv7ai2k2gh34"; depends=[]; }; crossReg = derive2 { name="crossReg"; version="1.0"; sha256="1866jhfnksv9rk89vw7w4gaxi76bxfjvqxx7cfa8nlrcsmaqd7rf"; depends=[]; }; crossdes = derive2 { name="crossdes"; version="1.1-1"; sha256="1d7lv3ibq1rwxx8kc3ia6l9dbz2dxdd5pnf2vhhjmwm448iamcfd"; depends=[AlgDesign gtools]; }; crossmatch = derive2 { name="crossmatch"; version="1.3-1"; sha256="082lrv2129mfhwlh99z3g8id3a29s8854skl152bl3ig8pk2gbjz"; depends=[nbpMatching survival]; }; + crossrun = derive2 { name="crossrun"; version="0.1.0"; sha256="0br57nraqhs5f1cpidc8kd31izm82wvhiw9pxcdj9v51l9vifbmx"; depends=[Rmpfr]; }; crosstalk = derive2 { name="crosstalk"; version="1.0.0"; sha256="0lfa89vhrzi7a1rghmygcjr8gzddw35sinb3jx6g49mc9jias7mk"; depends=[ggplot2 htmltools jsonlite lazyeval R6 shiny]; }; crossval = derive2 { name="crossval"; version="1.0.3"; sha256="0acpcisg6pkxblyc4j9hiri58h1rn7ay43p5ib5ia8a4a8bnfa4p"; depends=[]; }; crosswalkr = derive2 { name="crosswalkr"; version="0.1.1"; sha256="0yk5yxxsd1alfbfjg5bzjc5b07jfj5s551bzrv3dg57hxnqw9b2z"; depends=[dplyr haven labelled readr readxl tibble]; }; crossword_r = derive2 { name="crossword.r"; version="0.3.5"; sha256="1h6r5rrmla3jsdfnkxsv4drvp3nrkqkygqv9ak0pn37zlbms99z9"; depends=[dplyr jsonlite magrittr R6 r6extended stringr]; }; crp_CSFP = derive2 { name="crp.CSFP"; version="2.0.2"; sha256="0gazmhf5bv994x441m2xm0w18h9lw3y68qzdf6gmyqimj4wjqjgf"; depends=[MASS]; }; crplyr = derive2 { name="crplyr"; version="0.2.0"; sha256="14j0cn3ci6vbmimcinzp25ym0h264405jn8gw7w0gk3rcamgh50s"; depends=[crunch dplyr lazyeval purrr rlang stringr tibble]; }; - crqa = derive2 { name="crqa"; version="1.0.7"; sha256="008dmrgsajm73r3fl3lqsd4pgkdacpx6m48xg61yc02xciv7ad2b"; depends=[fields Matrix plot3D pracma tseriesChaos]; }; + crqa = derive2 { name="crqa"; version="1.0.9"; sha256="1k6jgkmgbjab78dynng1hlxdbnqrpwmiiw54rgyfhx6v3lcir75d"; depends=[fields Matrix plot3D pracma tseriesChaos]; }; crqanlp = derive2 { name="crqanlp"; version="0.3"; sha256="1ndd5k44w232x6k564r84lyahljgcnldfwgih3iiar3il94drbdg"; depends=[corpus crqa gutenbergr RCurl tm]; }; crrSC = derive2 { name="crrSC"; version="1.1"; sha256="171cw56q2yv1vb4qd0va75i2q89jcw1126q8pcbv0235g7p2a86z"; depends=[survival]; }; crrp = derive2 { name="crrp"; version="1.0"; sha256="1fq54jr6avrli91a4z1hp5img4kghyw1yvjr5xyccsanf9i35x8r"; depends=[cmprsk Matrix survival]; }; @@ -5450,11 +5688,11 @@ in with self; { crsnls = derive2 { name="crsnls"; version="0.2"; sha256="0rv0xrdl9ix6bhaf554gma8zf923w47f8j1dkbs8g6xjqjr1c40a"; depends=[]; }; crsra = derive2 { name="crsra"; version="0.2.3"; sha256="1rkqm88zmvp9gw442cby6qpvfw4pfw65wz0gyl2h37w87c3wwvrw"; depends=[digest dplyr knitr purrr rcorpora readr tibble tidytext]; }; crtests = derive2 { name="crtests"; version="0.2.1"; sha256="0z8idz37dgwvi1q2vryldii7fn9yxd32gds77ml76jfplxbkikpd"; depends=[caret plyr stringr]; }; - crul = derive2 { name="crul"; version="0.5.2"; sha256="0sfjv8jrb5x85b4dicp7789xxa0g6y89sfd96war84yidmh2a6z0"; depends=[curl httpcode mime R6 urltools]; }; - crunch = derive2 { name="crunch"; version="1.23.0"; sha256="0mcq4qnhn3gadq2ssglvh5wid0a0clkxza3zikxrxwa69vjp7x3q"; depends=[crayon curl httpcache httr jsonlite]; }; + crul = derive2 { name="crul"; version="0.6.0"; sha256="1vnir41mqah8ib9p2p4ij54bpv54baa1q9ad5j2a7hn59vwpjhh0"; depends=[curl httpcode mime R6 urltools]; }; + crunch = derive2 { name="crunch"; version="1.24.0"; sha256="0jydmicc4c4vkf6r3krybbrdf96059nx6q611lyd2qj32irlr49j"; depends=[crayon curl httpcache httr jsonlite]; }; crunchy = derive2 { name="crunchy"; version="0.2.0"; sha256="1q9mqpkg5ljb798922fmvjjp36kyjr1rrm6jf3s2fwjrhq186y3z"; depends=[crunch shiny]; }; - cruts = derive2 { name="cruts"; version="0.4"; sha256="0flhlv9pabmj667azc7vjacmk4d512s34xlrip176s8cmswprzg1"; depends=[lubridate ncdf4 raster sp stringr]; }; - crypto = derive2 { name="crypto"; version="1.0.2"; sha256="16k08kbn8lr3ycf61imc3fd0vdm2w1rzzn11c6vv7s8kfwvdcfdl"; depends=[curl doSNOW dplyr foreach jsonlite lubridate magrittr rvest tidyr xml2 xts yaml]; }; + cruts = derive2 { name="cruts"; version="0.5"; sha256="08mklbmwgaq6cf3hd40mingplwjss5im30l5j6nmy7lijp15nq7k"; depends=[lubridate ncdf4 raster sp stringr]; }; + crypto = derive2 { name="crypto"; version="1.0.3"; sha256="19d245sq8xhxmq252cjcymc86n6q6yq2b1liy2mm62agkyjxznrd"; depends=[curl doSNOW dplyr foreach jsonlite lubridate magrittr rvest tibble tidyr xml2 xts yaml]; }; cryst = derive2 { name="cryst"; version="0.1.0"; sha256="04da19dy3mkngd3ma44cd8cdkb5acjy9lbhfipa9flp339j1pp57"; depends=[flux pracma]; }; csSAM = derive2 { name="csSAM"; version="1.2.4"; sha256="1ms8w4v5m9cxs9amqyljc2hr1178cz6pbhmv7iiq9yj1ijnl4r1x"; depends=[]; }; csabounds = derive2 { name="csabounds"; version="1.0.0"; sha256="15l7i15w5jk4h3148dlk8v2i4awns5vxvv6m59qcv0hzns6jhx9j"; depends=[BMisc ggplot2 pbapply progress qte]; }; @@ -5468,18 +5706,19 @@ in with self; { cstar = derive2 { name="cstar"; version="1.0"; sha256="1zws4cq5d37hqdxdk86g85p2wwihbqnkdsg48vx66sgffsf1fgxd"; depends=[]; }; csv = derive2 { name="csv"; version="0.5.2"; sha256="1gwib79fysmiwaw48ghsygyqgc00j5zwy7lfgcziw1kp6nxkdk19"; depends=[]; }; csvread = derive2 { name="csvread"; version="1.2"; sha256="1zx43g4f4kr7jcmiplzjqk2nw1g5kmmfap85wk88phf6fp0w8l5p"; depends=[]; }; - csvy = derive2 { name="csvy"; version="0.1.3"; sha256="0vszbxqa88sdsi73wng4y8zxhrvcksqa6qs3rbh50c2nll8r8kb3"; depends=[yaml]; }; + csvy = derive2 { name="csvy"; version="0.3.0"; sha256="0id015szw1c63vd1h0515jsqdhyn32sxpxm89f3sb1qkgq3yynmy"; depends=[data_table jsonlite yaml]; }; cthreshER = derive2 { name="cthreshER"; version="1.1.0"; sha256="18b66d08dq8pvnixmm4ir4r800b37z5yillaa88l317mdilbci9s"; depends=[Matrix]; }; - ctl = derive2 { name="ctl"; version="1.0.0-0"; sha256="12hrrql9wz43s1d3sfyzlqzx7ajrl3hvf96776ik6icbm8by8h6j"; depends=[MASS qtl]; }; - ctmcd = derive2 { name="ctmcd"; version="1.3.5"; sha256="0nsazcfa8bg5r2ki5wf4v6q2ws47wk97zr4a5h9jj0mp1900rz2l"; depends=[coda expm numDeriv Rcpp RcppArmadillo]; }; + ctl = derive2 { name="ctl"; version="1.0.0-2"; sha256="1gpb43zn411l476dby2g38qkcvh2fsdcvbkr9jb274l1154km1xm"; depends=[MASS qtl]; }; + ctmcd = derive2 { name="ctmcd"; version="1.4.0"; sha256="1b4bf2j3gdzm417pimn9m365y7x11ddinq9mb5mixwsbf77dqagm"; depends=[coda expm numDeriv Rcpp RcppArmadillo]; }; ctmcmove = derive2 { name="ctmcmove"; version="1.2.9"; sha256="1pxyxbbhfa8arqfb7qw10ya1b8hy9ylqbqqzys6d9dsixvdk98h0"; depends=[fda gdistance Matrix raster sp]; }; ctmle = derive2 { name="ctmle"; version="0.1.1"; sha256="1k9nr2xbaqrbpp31vdcnmpwyazcw79k0r3gbcbinva4pgv2psp29"; depends=[glmnet SuperLearner tmle]; }; - ctmm = derive2 { name="ctmm"; version="0.5.0"; sha256="1lz07gsly4acdwmv62l01g3rmmjwkiww8hsxlbx0cp0jmk63znn1"; depends=[data_table expm fasttime Gmedian manipulate MASS Matrix numDeriv pbivnorm pracma raster rgdal scales shape]; }; + ctmm = derive2 { name="ctmm"; version="0.5.2"; sha256="1x8nzmhdby0nwm18l6b3y4x4b7pihfkpnhakykh23rfnr7d6ajj3"; depends=[data_table expm fasttime Gmedian manipulate MASS numDeriv pbivnorm pracma raster rgdal scales shape]; }; ctqr = derive2 { name="ctqr"; version="1.0"; sha256="1q4icv8qicgwr664cbrmkh2x9xmlrc80yvz8gnaqh86248kn4yp3"; depends=[pch survival]; }; + ctrlGene = derive2 { name="ctrlGene"; version="1.0.0"; sha256="0gz2js2n990sfwxwigp4dxqcf94f9bzcinyzjign5yvyr53fakvk"; depends=[psych]; }; cts = derive2 { name="cts"; version="1.0-21"; sha256="0wagxqb8msjc8z33qp7sc92l53f56d9bzz9160bmgpjxlj6cnqcj"; depends=[]; }; ctsem = derive2 { name="ctsem"; version="2.6.5"; sha256="0dk1q18sd4s5ynxq8sdhxc7p35qqc6z87d001pykbr0kzszyf9c2"; depends=[BH corrplot MASS Matrix mvtnorm OpenMx plyr Rcpp RcppEigen rstan rstantools shiny StanHeaders]; }; ctv = derive2 { name="ctv"; version="0.8-5"; sha256="0kl6z8dbbjgm29q0c5xy6lihjgf5cdihrllm27x0zbcvy8lyl51p"; depends=[]; }; - cubature = derive2 { name="cubature"; version="1.4"; sha256="1hd23b8v2kpqp5gr0va8p2q7j8w9rik6ks7zrr4b8mb2mwrakk74"; depends=[Rcpp]; }; + cubature = derive2 { name="cubature"; version="1.4-1"; sha256="10jl5l3xnigiq95829ssq69xbim97k851187dghc30awszcx4clh"; depends=[Rcpp]; }; cubfits = derive2 { name="cubfits"; version="0.1-3"; sha256="0i2iybm9vpyqnahzka66yms1namdd36bz1i1yjy74qsc1h995rga"; depends=[coda foreach]; }; cubing = derive2 { name="cubing"; version="1.0-5"; sha256="1q23fplvklaaldicqic0zpnh301m08zb9k21l47zj47g9m9pj4bc"; depends=[rgl]; }; cudaBayesreg = derive2 { name="cudaBayesreg"; version="0.3-16"; sha256="1xsamdsg4cq7l5r7czkg70j5gypf1dak3h353xfbz3rq0r0dni19"; depends=[cudaBayesregData oro_nifti]; }; @@ -5495,45 +5734,49 @@ in with self; { curvHDR = derive2 { name="curvHDR"; version="1.2-0"; sha256="185097ikqhmqqc4ha7l74inx5cmg1bhgw3cw40wk0ngc4wv4sfqi"; depends=[feature geometry hdrcde KernSmooth ks misc3d ptinpoly rgl]; }; curvecomp = derive2 { name="curvecomp"; version="0.1.0"; sha256="0ykgbwnh32w61cjcg1nyqak42hx0jrsrpbra2wh3pgj9clg1qad2"; depends=[multcomp]; }; cusp = derive2 { name="cusp"; version="2.3.3"; sha256="130m0is48bp11p5fpg17lwqwlavsa8fzfxjs0z62vl6lm006aahw"; depends=[]; }; + customLayout = derive2 { name="customLayout"; version="0.2.0"; sha256="0mr5s6arjm97bdgr6r8w1d33spiwnqw4spbl7smivpw7h8asi94m"; depends=[flextable gridExtra officer RColorBrewer]; }; customizedTraining = derive2 { name="customizedTraining"; version="1.1"; sha256="0rlfsnhmmcwx7iyjavj03v4kdfzxcqjggi8qpgmi6lkli3n0s6pg"; depends=[FNN glmnet]; }; cutoffR = derive2 { name="cutoffR"; version="1.0"; sha256="1801jylmpp4msyf07rhg4153kky1zvi4v0kkjb9d51dc7zkhh531"; depends=[ggplot2 reshape2]; }; - cutpointr = derive2 { name="cutpointr"; version="0.7.3"; sha256="09pcja8kp3sdsz2vp32s5vl7m5cz14rlbp9aa00y4qd21nyckyj9"; depends=[dplyr foreach ggplot2 gridExtra purrr Rcpp rlang tibble tidyr]; }; + cutpointr = derive2 { name="cutpointr"; version="0.7.4"; sha256="0d9g0xrypfh382zpil16yh65bl3rlygj7vgzkqblwad8ladbd27s"; depends=[dplyr foreach ggplot2 gridExtra purrr Rcpp rlang tibble tidyr]; }; cuttlefish_model = derive2 { name="cuttlefish.model"; version="1.0"; sha256="1rmkfyfd1323g2ymd5gi1aksp160cwy5ha5cjqh5r6fzd8hhqjxs"; depends=[]; }; cvAUC = derive2 { name="cvAUC"; version="1.1.0"; sha256="13bk97l5nn97h85iz93zxazhr63n21nwyrpnl856as9qp59yvn64"; depends=[data_table ROCR]; }; cvTools = derive2 { name="cvTools"; version="0.3.2"; sha256="0b7xb6dmhqbvz32zyfbdvm9zjyc59snic6wp1r21ina48hchn3sj"; depends=[lattice robustbase]; }; - cvar = derive2 { name="cvar"; version="0.1-1"; sha256="0aqv42wbhdql1v0mxspr5ms2mwkk6yw0snzzjg5qg682m5f13ghn"; depends=[gbutils Rdpack]; }; + cvar = derive2 { name="cvar"; version="0.3-0"; sha256="164k8b40w1npbq3r9i6n9m0hkia3wavsid88zyc63j56lxxk8zmm"; depends=[fGarch gbutils Rdpack]; }; cvcrand = derive2 { name="cvcrand"; version="0.0.2"; sha256="1gclzn6qqjylxg3v263x5cfg1wjkqviqb3fzzb7w0ckpld2his0v"; depends=[tableone]; }; cvequality = derive2 { name="cvequality"; version="0.1.3"; sha256="19mpf2vjj2hfgdr3mx5y1i0ldb0byvv2ii7lyanhc6c2a3mirs38"; depends=[]; }; cvq2 = derive2 { name="cvq2"; version="1.2.0"; sha256="19k95xg2y3wd4mx3wvbrc1invybd446g13vsp3dv05nw2kx4f6w8"; depends=[]; }; cvxbiclustr = derive2 { name="cvxbiclustr"; version="0.0.1"; sha256="00k75zy8v6qd5fg0h258i5z8ljjkfgkxz45cspysl1ap89d5n7df"; depends=[igraph Matrix]; }; cvxclustr = derive2 { name="cvxclustr"; version="1.1.1"; sha256="0idmx4wgz4d0b1xzmlq5bsk2f2q38lpf9c117hg97xsfndzn7vqj"; depends=[igraph Matrix]; }; - cwhmisc = derive2 { name="cwhmisc"; version="6.5"; sha256="1nakiyamg05r7xysac5b1y0ddq6s25v6ygsrb487b5jcv0d95g2n"; depends=[lattice]; }; + cwhmisc = derive2 { name="cwhmisc"; version="6.6"; sha256="1pf365g4f51cfrhlff9mqw2ddvkps0abax17zcn3vw1ba2djalnp"; depends=[lattice]; }; cwm = derive2 { name="cwm"; version="0.0.3"; sha256="1ln2l12whjhc2gx38hkf3xx26w5vz7m377kv67irh6rrywqqsyxn"; depends=[MASS matlab permute]; }; + cxhull = derive2 { name="cxhull"; version="0.1.1"; sha256="0ihvgliwssf5jprb7f842vsck1d5x657c43pb6wi03y4wdz2r0s5"; depends=[]; }; cxxfunplus = derive2 { name="cxxfunplus"; version="1.0"; sha256="0kyy5shgkn7wikjdqrxlbpfl3zkkv4v1p8a1vv0xkncwarjs4n8d"; depends=[inline]; }; cycleRtools = derive2 { name="cycleRtools"; version="1.1.1"; sha256="1l7w2lm4s149ndd85v41pkdrdig6l3nmhl14bdx56aw8q57fxmb0"; depends=[Rcpp xml2]; }; cyclestreets = derive2 { name="cyclestreets"; version="0.1.5"; sha256="1wvg43wrnh0lz2pkkrbidzdsrkypdl2r4ccs9jhdsj8ixm158dvf"; depends=[httr jsonlite magrittr sf stringr]; }; cyclocomp = derive2 { name="cyclocomp"; version="1.1.0"; sha256="0gky3svk02wiajw7nfjh30684h3qxili4bvsab0m7b6cggw6bgyd"; depends=[callr crayon desc remotes withr]; }; cycloids = derive2 { name="cycloids"; version="1.0"; sha256="00pdxny11mhfi8hf76bfyhd1d53557wcbl2bqwjzlpw5x3vdnsan"; depends=[]; }; - cymruservices = derive2 { name="cymruservices"; version="0.2.0"; sha256="1pgk9llaz0glhgf3n60nq3xb8kp4jkk8paz4scxff3whyksxv4yn"; depends=[purrr stringr]; }; + cymruservices = derive2 { name="cymruservices"; version="0.5.0"; sha256="1xhdvijybdy7312qdbp50881yix587pmym0hchnwb3h0vhjv553v"; depends=[memoise pingr stringi]; }; cyphid = derive2 { name="cyphid"; version="1.1"; sha256="0ya9w8aw27n0mvvjvni4hxsr4xc8dd08pjxx7zkfl1ynfn5b08am"; depends=[fda]; }; cystiSim = derive2 { name="cystiSim"; version="0.1.0"; sha256="0pz8jxi4lgcwzrb4dh8xn63xhpaga5rzg5hwqicwv8isc16iqizd"; depends=[ggplot2 knitr magrittr]; }; cytoDiv = derive2 { name="cytoDiv"; version="0.5-3"; sha256="00c0gqgypywgbhavb15bvj6ijrk4b5zk86w85n9kwr4069b7jvwc"; depends=[GenKern plotrix]; }; - cytometree = derive2 { name="cytometree"; version="1.1.1"; sha256="1v90dp2bk06iv7im6r3rgj442ajxyy0h05h1higrjyw6k2v78dmd"; depends=[ggplot2 igraph mclust Rcpp RcppArmadillo]; }; + cytofan = derive2 { name="cytofan"; version="0.1.0"; sha256="0gqs98mnwiawnyfb9hs5nlin8d1fj64bszn4b40gs8ajyh36r9pp"; depends=[ggplot2 RColorBrewer]; }; + cytometree = derive2 { name="cytometree"; version="1.2.0"; sha256="1919f9d7phgnf1z5srgjj4h4pgl9hrv9rx75rifj819zv2s9hfig"; depends=[cowplot ggplot2 igraph mclust RColorBrewer Rcpp RcppArmadillo robustbase]; }; cytominer = derive2 { name="cytominer"; version="0.1.0"; sha256="1p988aw689kgpbglmzrnl30krnbynwk3dgjv7w3x2719hi481z2j"; depends=[caret doParallel dplyr foreach futile_logger magrittr purrr rlang tibble tidyr]; }; d3Network = derive2 { name="d3Network"; version="0.5.2.1"; sha256="1gh979z9wksyxxxdzlfzibn0ysvf6h1ij7vwpd55fvbwr308syaw"; depends=[plyr rjson whisker]; }; d3Tree = derive2 { name="d3Tree"; version="0.2.0"; sha256="0xjr36hdd00dy8s8z1a1s44dn2wg0nm6yqc1rri2l0dqrbh4nrbn"; depends=[dplyr htmlwidgets magrittr plyr stringr]; }; d3heatmap = derive2 { name="d3heatmap"; version="0.6.1.2"; sha256="1ici8j0wzzklhmw94qlxm292qs562vc32wq8mnjsas2n1p35vkmk"; depends=[base64enc dendextend htmlwidgets png scales]; }; d3plus = derive2 { name="d3plus"; version="0.1.0"; sha256="0kadz83pals03n0v3zqhmhf6visigk52yn58xckhb57fid4xzj5w"; depends=[htmlwidgets magrittr]; }; - d3r = derive2 { name="d3r"; version="0.8.2"; sha256="1i8y2pr79v2mfwgi6sgibsgwp0l717yf86dn07l39nfgyrxgx9f4"; depends=[dplyr htmltools tidyr]; }; + d3r = derive2 { name="d3r"; version="0.8.4"; sha256="01z70nc48z7l3lr5p3nndiv8hxqlbinn7yr8pd15yk35f46hcsbk"; depends=[dplyr htmltools tidyr]; }; dChipIO = derive2 { name="dChipIO"; version="0.1.5"; sha256="1xrafw5h071d8rfqaic3gifc80jpiddjz5x6l2cr8kgjvph60gqh"; depends=[]; }; dCovTS = derive2 { name="dCovTS"; version="1.1"; sha256="1pd50nfmfcqpi8zj20ngl0hc23qa4rabqhc1xci3ivyhs0valhsl"; depends=[doParallel energy foreach]; }; dGAselID = derive2 { name="dGAselID"; version="1.2"; sha256="0da7fi872i3ycb3j5v4isr4x2z39a68w4mdq859zslmqhiqd43b6"; depends=[ALL Biobase genefilter MLInterfaces]; }; dHSIC = derive2 { name="dHSIC"; version="2.0"; sha256="1acbzln2rlyranccsjndpw6pj4a2lyb24jb52r2wms8lsg4fn2m9"; depends=[Rcpp]; }; - dLagM = derive2 { name="dLagM"; version="1.0.2"; sha256="0wl1sivphm6plmvjixxs90ki8a1pi4nb2vxqdm5xxbi0ljwpgl1x"; depends=[AER dynlm formula_tools Hmisc plyr wavethresh]; }; - dMod = derive2 { name="dMod"; version="0.4"; sha256="12q80pk0j5081qz4rb19iib0n4h1yf1c42iq1z14yyrmki3266pm"; depends=[cOde deSolve ggplot2 plyr rootSolve stringr]; }; + dLagM = derive2 { name="dLagM"; version="1.0.10"; sha256="0fbblcg2z10a2yijxl6sgbzb59y0mwwg6wg1p68madkr4r3w79mw"; depends=[AER dynlm formula_tools plyr wavethresh]; }; + dMod = derive2 { name="dMod"; version="0.4.2"; sha256="0zxan4q3xlmk441yzl8jq53qh966njjy9hdprk96pvqf8pa3ca40"; depends=[cOde deSolve digest dplyr ggplot2 plyr rlang rootSolve stringr]; }; dSVA = derive2 { name="dSVA"; version="1.0"; sha256="0vy0flyg82x0n9vw6jf9f76qy84sp0wnis91faj37ac5hdv3pvsb"; depends=[sva]; }; + daarem = derive2 { name="daarem"; version="0.2"; sha256="1lh7p8nsn984v3p2fis0ipv4vd2wli60l730i47ij0g38swrs58x"; depends=[]; }; dad = derive2 { name="dad"; version="3.1.1"; sha256="120f7asg3hbr0c5n821jdr8c7cz67dbv1v646v6xgnyy4n6ym2qa"; depends=[e1071 lattice]; }; - dae = derive2 { name="dae"; version="3.0-16"; sha256="0nryjijr6cq0pm02ik58lish57ld3nfd16c908jq40dhgws2q7x9"; depends=[ggplot2]; }; + dae = derive2 { name="dae"; version="3.0-23"; sha256="0rsvnxvfbvcfwm544lwvp4ivwv2nndgscc3c5ap99br7c5jm4xym"; depends=[ggplot2]; }; daewr = derive2 { name="daewr"; version="1.1-7"; sha256="01n9g3adjk66wx9lm9gl6wa3y9ba5w0w0p5ayj8rx5ywxnm8fnvi"; depends=[BsMD FrF2 lattice]; }; daff = derive2 { name="daff"; version="0.3.0"; sha256="1kl5pjwxds6bz58zd5xaa1hknd6f9i0512895fhljqi7kvsrldra"; depends=[jsonlite V8]; }; dafs = derive2 { name="dafs"; version="1.0-37"; sha256="1vdi57qaqdn39yf1ih2gzry02l289q4bffpksglsl4shs6bg2206"; depends=[s20x]; }; @@ -5548,22 +5791,22 @@ in with self; { darts = derive2 { name="darts"; version="1.0"; sha256="07i5349s335jaags352mdx8chf47ay41q7b0mh2xjwn2h9kzgqib"; depends=[]; }; dashboard = derive2 { name="dashboard"; version="0.1.0"; sha256="1znqwvz49r47lp6q48qaas0s63wclgybav82a247qvcavzns3kip"; depends=[Rook]; }; dat = derive2 { name="dat"; version="0.4.0"; sha256="1nw16hsw9b4hpcl5rqrlw6yk9y2h1pd0ra1c7iz82sknkyd5afi6"; depends=[aoos data_table dplyr Formula magrittr progress tibble]; }; - data_table = derive2 { name="data.table"; version="1.11.4"; sha256="1mc1drqj5i5ar2za3nkh5j70y37s7z7xwqri2r2b72zkqggg3k7x"; depends=[]; }; - data_tree = derive2 { name="data.tree"; version="0.7.6"; sha256="0fq7wsql4rmbfjif3klccciq7iqhrwjirj21il6n9r5f1i6x5qxn"; depends=[DiagrammeR R6 stringr]; }; + data_table = derive2 { name="data.table"; version="1.11.8"; sha256="1nb6wngrk1a30m984524gf26fa1nwgyf4y4an94dibcwb5jp8hnw"; depends=[]; }; + data_tree = derive2 { name="data.tree"; version="0.7.8"; sha256="05svd1h70dn92imadw2djqqvchx30md74d4z6a00grkajj16cchb"; depends=[DiagrammeR R6 stringr]; }; data_world = derive2 { name="data.world"; version="1.2.2"; sha256="1d9hh4965f2d0lwh2xxhnxzc948ailkjzdax3d3z9l8lakqfrx0h"; depends=[dwapi httr ini miniUI shiny stringi]; }; - data360r = derive2 { name="data360r"; version="1.0.1"; sha256="1g245zg70ch81zjmd1ng16lks38qr0a6m63y582w558mza7v148g"; depends=[curl data_table jsonlite reshape2]; }; - dataCompareR = derive2 { name="dataCompareR"; version="0.1.1"; sha256="06nba2yir2yz1189bsag9yavdf9hfmpswxdy92dlnbz9d27jjsic"; depends=[dplyr knitr markdown stringi]; }; - dataMaid = derive2 { name="dataMaid"; version="1.1.2"; sha256="1phy03bya6zd3xpypic3ymjqgx8iv2y8661mfyvbz99a2bvspj5a"; depends=[ggplot2 gridExtra haven htmltools magrittr pander robustbase whoami]; }; + data360r = derive2 { name="data360r"; version="1.0.2"; sha256="09s1p5yh756jl13jq6jx10r009lqvpry5y7y83xd4dqwa180s9gg"; depends=[curl data_table jsonlite reshape2]; }; + dataCompareR = derive2 { name="dataCompareR"; version="0.1.2"; sha256="0n10dqnrlpwafxys68b3ly156235lhqby71qay0vb0r6bvl2g349"; depends=[dplyr knitr markdown stringi]; }; + dataMaid = derive2 { name="dataMaid"; version="1.2.0"; sha256="0w2dslyzr35y6mjg46sq7cc3mar6v29md1i716hiix9kzy7b5782"; depends=[DT ggplot2 gridExtra haven htmltools magrittr pander robustbase stringi whoami]; }; dataMeta = derive2 { name="dataMeta"; version="0.1.1"; sha256="13xxayqxbps07h0xr5b7sb7q30gy5zm7jzzaq4k20fskkjrzhzcm"; depends=[dplyr]; }; - dataPreparation = derive2 { name="dataPreparation"; version="0.3.6"; sha256="1nx9lbwrp55wyirqyfmwddilinhyd9428l9n4kb8bwms7hjcf18h"; depends=[data_table lubridate Matrix progress stringr]; }; + dataPreparation = derive2 { name="dataPreparation"; version="0.3.8"; sha256="1k4lww4n57zqf5lk2gwrjjk9qfv3b4zvb18591mnq5bbvylkw2c4"; depends=[data_table lubridate Matrix progress stringr]; }; dataQualityR = derive2 { name="dataQualityR"; version="1.0"; sha256="0f2410sd6kldv7zkqsmbz1js0p5iq7zwlnfwmmnlbrd303p35p3j"; depends=[]; }; dataRetrieval = derive2 { name="dataRetrieval"; version="2.7.3"; sha256="0lrv6fyqi7k079wdpqilgjlb4j2qfs3r02d9ip8s9yznfwqsl826"; depends=[curl dplyr httr jsonlite lubridate readr reshape2 xml2]; }; datacheck = derive2 { name="datacheck"; version="1.2.2"; sha256="1i3n5g1b6ix8gpn4c74s7ll1dbrllrzgpb1f3hk449d6p4kmisq6"; depends=[Hmisc shiny stringr]; }; - datacheckr = derive2 { name="datacheckr"; version="0.2.0"; sha256="1kk38pb4dsy6ll6drz2gsngzsv81pwmjrbvh3izm22h849mvlypv"; depends=[]; }; + datadigest = derive2 { name="datadigest"; version="1.0.2"; sha256="1v4nwflrgjhwkrdlrjnqyq1spv1jkgxn1kmapml0zrvnvwf0r1a1"; depends=[haven Hmisc htmltools htmlwidgets jsonlite miniUI shiny tibble]; }; datadogr = derive2 { name="datadogr"; version="0.1.2"; sha256="10zbxb9gkymw78ras9y4wrifz7cxh3y630yzjcf9ds2p557vcjzp"; depends=[anytime dplyr glue httr lubridate purrr stringr tibble tidyr]; }; - datadr = derive2 { name="datadr"; version="0.8.6"; sha256="0fmywnxcvw31vfb9iaxqiw19ycnd98v41pdsdknabysr7fpnygfq"; depends=[codetools data_table digest dplyr hexbin magrittr]; }; + datadr = derive2 { name="datadr"; version="0.8.6.1"; sha256="1x8j34gj5c5arr1iqxfx8cs8hjapylvfjsnh4k6a34z65r83h93y"; depends=[codetools data_table digest dplyr hexbin magrittr]; }; dataframes2xls = derive2 { name="dataframes2xls"; version="0.4.7"; sha256="10krlv0l5w021z0qd7rj93pzfjjmcjlda4xz4vq470bxbjmn1bss"; depends=[]; }; - datafsm = derive2 { name="datafsm"; version="0.2.1"; sha256="16l6ssprsvnpzxlfnqj7r061x700704s5gdci5x9ixdjmglakmdd"; depends=[caret GA Rcpp]; }; + datafsm = derive2 { name="datafsm"; version="0.2.2"; sha256="1q4vfvpvlp127lh6y2ls59gg8dg20syv0sqrwa7sfnml6ysb21q2"; depends=[caret GA Rcpp]; }; datamap = derive2 { name="datamap"; version="0.1-1"; sha256="0qm4zb9ldg4wz1a7paj5ilr1dhyagq81rk9l2v43hmkv52sssgkv"; depends=[DBI]; }; datamaps = derive2 { name="datamaps"; version="0.0.3"; sha256="00pvns98miq56z3prbb5qg608d5ns9wbp0711x3mmqg0bld1xwmp"; depends=[htmlwidgets magrittr]; }; datamart = derive2 { name="datamart"; version="0.5.2"; sha256="0c0l157fzkcp30ch4ymaalcx18zhz6sa5srr50w9izhbx3pmldxp"; depends=[base64 gsubfn markdown RCurl RJSONIO XML]; }; @@ -5571,12 +5814,12 @@ in with self; { dataone = derive2 { name="dataone"; version="2.1.1"; sha256="17x1v1v13v06qyjb5mvxcdnlp7ln73rhgaib1w1sc44385m33hxs"; depends=[base64enc datapack hash httr jsonlite parsedate plyr stringr uuid XML]; }; datapack = derive2 { name="datapack"; version="1.3.1"; sha256="0hzc68vgjvpm235zg8k2642c3jzh3ls9kp6lpz720y1b56q8k3n7"; depends=[digest hash redland uuid XML]; }; datapasta = derive2 { name="datapasta"; version="3.0.0"; sha256="022ci7iy683lh3fh13a4b3szzqp6j4fchil695bifhi0a34bnxyr"; depends=[clipr readr rstudioapi]; }; - datarobot = derive2 { name="datarobot"; version="2.8.0"; sha256="06yqp1lvskvcyiz8a2jy7kzv721qrvf5ycw6g9jl2bj84raifmap"; depends=[curl httr jsonlite yaml]; }; - datasauRus = derive2 { name="datasauRus"; version="0.1.2"; sha256="1ixfc1v0iv5jb4920957xhpq9kchdy482vdsm51wj1961ldrkhvh"; depends=[]; }; + datarobot = derive2 { name="datarobot"; version="2.9.0"; sha256="0z49dyr0gpgasnf1igyjivpjr2116rvkdirxxvq2nlb6q7i5smjd"; depends=[curl httr jsonlite yaml]; }; + datasauRus = derive2 { name="datasauRus"; version="0.1.4"; sha256="1w1yhwwrmh95bklacz44wjwynxd8cj3z8b9zvsnzmk18m5a4k0fl"; depends=[]; }; dataseries = derive2 { name="dataseries"; version="0.2.0"; sha256="11wc2p5m8qbdmkpbd21lpwl28a1dpab88c3gqyrhsn0298lpnip4"; depends=[]; }; - datasets_load = derive2 { name="datasets.load"; version="0.1.0"; sha256="029rxg0h17nszkxgq5kjd0njymb8pgdsabmz5slshzd2ijjh82jz"; depends=[DT miniUI shiny]; }; + datasets_load = derive2 { name="datasets.load"; version="0.3.0"; sha256="13ywnqln831i5hlf1cpqcyc77blg99w8jvy8jic17z86fjxh4gim"; depends=[DT miniUI shiny]; }; datastepr = derive2 { name="datastepr"; version="0.0.2"; sha256="039yggdj8jdici7hwmkjwgix45lvwjl7rw5h2rfzsm9xaq6vw1z2"; depends=[dplyr lazyeval magrittr R6 tibble]; }; - datastructures = derive2 { name="datastructures"; version="0.2.6"; sha256="1sigcm4w9fj6i538vpf939x9blwx2cfa626lfc8ya8fr8wd5w7vg"; depends=[BH purrr Rcpp]; }; + datastructures = derive2 { name="datastructures"; version="0.2.7"; sha256="0lvm2n056msbmx3aw3a2wkn8vcyjhb5m9iaqdirpcvbzdpigfj80"; depends=[BH purrr Rcpp]; }; datasus = derive2 { name="datasus"; version="0.4.1"; sha256="175bzhjigri49p4v9v3kwdc233w0l3v35220m05qsbpn6in7gw67"; depends=[dplyr httr magrittr RCurl readr rvest stringi stringr xml2]; }; datautils = derive2 { name="datautils"; version="0.1.5"; sha256="1yy25a84zmfh54jvxwa7mv4j296rmjgd40m4p81mrsswlqvncmfn"; depends=[deldir gplots gtools]; }; dataverse = derive2 { name="dataverse"; version="0.2.0"; sha256="0lyga8rdsir2yr1n9nr10iiaf6a7dxp1nb04bx8mq8ljrvpkgr8n"; depends=[httr jsonlite xml2]; }; @@ -5592,41 +5835,44 @@ in with self; { dbConnect = derive2 { name="dbConnect"; version="1.0"; sha256="1vab5l4cah5vgq6a1b9ywx7abwlsk0kjx8vb3ha03hylcx546w42"; depends=[gWidgets RMySQL]; }; dbEmpLikeGOF = derive2 { name="dbEmpLikeGOF"; version="1.2.4"; sha256="0vhpcxy702cp3lvlif2fzmvccys8iy7bv1fbg6ki2l8bvn2f7c5p"; depends=[]; }; dbEmpLikeNorm = derive2 { name="dbEmpLikeNorm"; version="1.0.0"; sha256="0h5r2mqgallxf9hin64771qqn9ilgk1kpsjsdj2dqfl3m8zg967l"; depends=[dbEmpLikeGOF]; }; - dbarts = derive2 { name="dbarts"; version="0.9-4"; sha256="1xglsx2x8jq71q5y377kcc92j8nymh3v11idjj44gixpm8lspljc"; depends=[]; }; + dbarts = derive2 { name="dbarts"; version="0.9-5"; sha256="0pjw5fljn3fzsimsyfc21xq6klrxmav8snjjjp8myn19viikv1rg"; depends=[]; }; dbfaker = derive2 { name="dbfaker"; version="0.1.0"; sha256="00n2z4q5drpg26pw826i16rg07m7w66a0r466q2lrl14hxs4rcaq"; depends=[assertive DBI dplyr foreach parsedate RPostgreSQL tidyr]; }; - dbhydroR = derive2 { name="dbhydroR"; version="0.2-5"; sha256="1vldyc7ksi0pbdvnydbsjzap3ghh447x5c15n0s5isw82mqssnjz"; depends=[httr reshape2 XML]; }; + dbhydroR = derive2 { name="dbhydroR"; version="0.2-6"; sha256="0pmd6bakifacmdk2zwlsg2zfdqc5jibc5jbd1mvnmllh5d0wwcqm"; depends=[httr reshape2 XML]; }; dblcens = derive2 { name="dblcens"; version="1.1.7"; sha256="02639vyaqg7jpxih8cljc8snijb78bb084f4j3ns6byd09xbdwcw"; depends=[]; }; dblr = derive2 { name="dblr"; version="0.1.0"; sha256="0wzmhmp706mw0pkh81nsb7qzclwyhm6f2mjvpvz043ng5xrxwvvw"; depends=[CatEncoders data_table Metrics xgboost]; }; dbmss = derive2 { name="dbmss"; version="2.6-3"; sha256="0b3vbsb01rz46mspfk8v9dgwqkxnjkv5d6152zg1zsvyv0z9wvqd"; depends=[cubature Rcpp RcppParallel spatstat spatstat_utils]; }; dbplot = derive2 { name="dbplot"; version="0.3.0"; sha256="1sdhw73a518pj81p4xzfkyk5qnfvv7pmizqgwypmkmr3j87klkdx"; depends=[dplyr ggplot2 purrr rlang]; }; - dbplyr = derive2 { name="dbplyr"; version="1.2.1"; sha256="1nwrls9c3kc9q7405jp6b9sh23642sz13yw55iikgw134shffj5k"; depends=[assertthat DBI dplyr glue purrr R6 rlang tibble tidyselect]; }; + dbplyr = derive2 { name="dbplyr"; version="1.2.2"; sha256="0j5w6a1qim972kv4vmvinp3j50yr4idmm9cd3w7y3zsz0nq0nhcx"; depends=[assertthat DBI dplyr glue purrr R6 rlang tibble tidyselect]; }; dbscan = derive2 { name="dbscan"; version="1.1-2"; sha256="08s73i1pnyfsm10sf15rnn58lj1pzrca6i38dq5ivr5xghb3pksy"; depends=[Rcpp]; }; dbstats = derive2 { name="dbstats"; version="1.0.5"; sha256="0pr80mx8y87l96hhg0rp3ajxl7yx2f8qr0y1zrjkbzxavjmp9k34"; depends=[cluster pls]; }; - dbx = derive2 { name="dbx"; version="0.1.0"; sha256="026iqa2wnh0amkv0nnflg3wyqnfrh94imrw486k5i1561abdzndq"; depends=[DBI]; }; + dbx = derive2 { name="dbx"; version="0.2.2"; sha256="1n6r2plq718xwxw2q2dxc3vql0brnin7dm3lsv1nh41rwk9ypsp8"; depends=[DBI]; }; dc3net = derive2 { name="dc3net"; version="1.2.0"; sha256="19ibsvbnq6y88vqvgkm31zrqwjhpml59d792bz0zkk50r1q5bnyr"; depends=[c3net igraph RedeR]; }; dcGOR = derive2 { name="dcGOR"; version="1.0.6"; sha256="0rvwa25r23yayx1i6xhkfaw2z85d2iyfx3slg3aq1m0fa7kj380p"; depends=[dnet igraph Matrix]; }; dcemriS4 = derive2 { name="dcemriS4"; version="0.55"; sha256="15x4hjc5fwpn80h90q5x9a3p84pp3mxsmcx4hq5l0j52l9dy9nv3"; depends=[oro_nifti]; }; dclone = derive2 { name="dclone"; version="2.2-0"; sha256="05myb01ypnhf9wdk3i8s9xldn8ihvw7gf4ajqld886nvc306rfkv"; depends=[coda Matrix rjags]; }; dcminfo = derive2 { name="dcminfo"; version="0.1.7"; sha256="03r0ynzc5cck2rz20zbg5zx8v6s66ivizqav1pjkyvp6kxkmnf8q"; depends=[CDM]; }; dcmle = derive2 { name="dcmle"; version="0.3-1"; sha256="1d6zk9413h30wcw8q1gnjzk67vshmjcpnh8zjxrsh1h69i1z6rpy"; depends=[coda dclone lattice]; }; - dcmodify = derive2 { name="dcmodify"; version="0.1.1"; sha256="1a909v6jhihwwmq7lzv2xazrkfa1553kbrjsbjfsh1qrqdiam3sr"; depends=[settings validate yaml]; }; - dcmr = derive2 { name="dcmr"; version="1.0"; sha256="1a89wr1n8sykjbwa316zlmcffaysksrqnbd89anxqj8sgw9xv6jq"; depends=[ggplot2 KFAS plyr reshape2 tableplot]; }; + dcmodify = derive2 { name="dcmodify"; version="0.1.2"; sha256="093rh3r3n0wjdpx861xiqd1zqd5v1v9rzxgcynz4awr7jbm5xszi"; depends=[settings validate yaml]; }; dcurver = derive2 { name="dcurver"; version="0.9.1"; sha256="1cfy0j3rmi3laszrgd3i59cfy4xfs2p6h9dcwbkwq6wnshrpypfn"; depends=[Rcpp RcppArmadillo]; }; dcv = derive2 { name="dcv"; version="0.1.1"; sha256="12c716x8dnxnqksibpmyysqp2axggvy9dpd55s9bhnsvqvi6dshj"; depends=[lmtest]; }; ddalpha = derive2 { name="ddalpha"; version="1.3.4"; sha256="16cn0bhbaz9l9k4y79sv2d4f7pvs7dyka273y89igs5jvr99kfj1"; depends=[BH class geometry MASS Rcpp robustbase sfsmisc]; }; ddeploy = derive2 { name="ddeploy"; version="1.0.4"; sha256="06s4mn93sl33gldda9qab8l3nqig8zq0fh1s2f98igsysmn31br5"; depends=[httr jsonlite]; }; + ddiv = derive2 { name="ddiv"; version="0.1.0"; sha256="1r2sxlkw1vxf2svdi1nary3hb7c5k1b4j820mj268r9swmy632ch"; depends=[MASS segmented]; }; ddpcr = derive2 { name="ddpcr"; version="1.9"; sha256="0xdy36wdl972xgzs3chzs7x1n4z1xvj1vahcz2pxa1wrr4sd9z8q"; depends=[dplyr DT ggplot2 lazyeval magrittr mixtools plyr readr shiny shinyjs]; }; + ddsPLS = derive2 { name="ddsPLS"; version="1.0.1"; sha256="08kkjs50zn9z6mvjiz9ic09w01h7w088plgnbcg10vc7cbjgr05a"; depends=[doParallel foreach MASS RColorBrewer Rdpack]; }; ddst = derive2 { name="ddst"; version="1.4"; sha256="1y0immm337adkd2bjx8c5pf02w9wysv3gj26f4qf0jiba0f2wk8n"; depends=[evd orthopolynom]; }; deBInfer = derive2 { name="deBInfer"; version="0.4.2"; sha256="108vijk71sgsj14hwfv78r4lnn68cybvnpr92zvrvl0d82b7qxfd"; depends=[coda deSolve MASS mvtnorm PBSddesolve plyr RColorBrewer truncdist]; }; deGradInfer = derive2 { name="deGradInfer"; version="1.0.0"; sha256="1wl1pw1rwins4gr47a8ii4diw6wd6cx8ib4l5bhri5f3crbw7l86"; depends=[deSolve gdata gptk]; }; deSolve = derive2 { name="deSolve"; version="1.21"; sha256="0qqc4mknw1jblzcmph1dg3k1p6w42yal0k1xjh8pqk7yb3a75hs5"; depends=[]; }; deTestSet = derive2 { name="deTestSet"; version="1.1.5"; sha256="07wbgniwkpp0yry6wvchvszr8isxs1i9k6km951r5c009w1iviwk"; depends=[deSolve]; }; deadband = derive2 { name="deadband"; version="0.1.0"; sha256="02pq3d0l0wy8bdlyfir3zf46j1ascx4qajyq5cf28yl62q6ngq5d"; depends=[TTR]; }; + deal = derive2 { name="deal"; version="1.2-39"; sha256="0sw0v1mm004ky1gjw3dmvf2vb7nf2j9s9386bhqxijw63j7xnjd3"; depends=[]; }; deamer = derive2 { name="deamer"; version="1.0"; sha256="1xbxr78n6s1yhf192ab4syi1naqlwl9z4cxzchrkw80q7bxqfiz8"; depends=[]; }; debugme = derive2 { name="debugme"; version="1.1.0"; sha256="1c9sg55zvf10h8198jdnpamm6f66lzw3c3jnmdp9ls6na0j0xbjd"; depends=[crayon]; }; - decido = derive2 { name="decido"; version="0.1.0"; sha256="1d53qcpy165f9izaj0x5x5d5h7jvihhk6mghs9g52dfxrvpndfgn"; depends=[oz Rcpp]; }; + debugr = derive2 { name="debugr"; version="0.0.1"; sha256="0lfq0s0hibd00558vl3dmvrkzxjc7q62xr8sqzai0pv9a9lhixcn"; depends=[rprojroot rstudioapi]; }; + decido = derive2 { name="decido"; version="0.2.0"; sha256="17myg67qry1sbd1scv9bbvdh67fpcnqcb6r8n0kajdxb96vnlqk0"; depends=[Rcpp]; }; decision = derive2 { name="decision"; version="0.1.0"; sha256="13d0yyg5zp7n3r92l0l1dsffxfph6vacrlzga9rz41l5pja72z6g"; depends=[]; }; - decisionSupport = derive2 { name="decisionSupport"; version="1.103.7"; sha256="1nmrr0fic391sxxfnyp32yb889bwb3zkyb4b8g8sk2pgrsqrbybl"; depends=[chillR msm mvtnorm nleqslv rriskDistributions]; }; + decisionSupport = derive2 { name="decisionSupport"; version="1.103.8"; sha256="1xp97v22ar4nsv2q4di6rqfin7pa7a6zqw5d1zmm5aqxfi07nc4x"; depends=[chillR msm mvtnorm nleqslv rriskDistributions]; }; decode = derive2 { name="decode"; version="1.2"; sha256="1qp0765gl3pgfdzjwj7icf3zminxxmrlw6gx3vj51y6c2y5ws4as"; depends=[]; }; decoder = derive2 { name="decoder"; version="1.1.12"; sha256="0jacp5fqi3l87a86kzhivwd7bl9ndcpymw1vkzmr9r5my8d119pk"; depends=[backports]; }; decomposedPSF = derive2 { name="decomposedPSF"; version="0.1.3"; sha256="0p9n0qi21facdp9c4fzs78ap4w1wvpvkv51kgx1gkr949kw8cv4n"; depends=[forecast PSF Rlibeemd tseries]; }; @@ -5640,7 +5886,8 @@ in with self; { deeplr = derive2 { name="deeplr"; version="1.0.0"; sha256="0pg1vy4x53qns8qn5sv0nqplf23w8dwj0b0wbibpr52lgqjc34r7"; depends=[httr purrr rjson stringr tibble tokenizers utf8]; }; deepnet = derive2 { name="deepnet"; version="0.2"; sha256="09crwiq12wzwvdp3yxhc40vdh7hsnm4smqamnk4i6hli11ca90h4"; depends=[]; }; default = derive2 { name="default"; version="1.0.0"; sha256="0hzxgp9la9kll5cw3m4gd02rii571xsn1v53kz407k7k6rfg5mda"; depends=[]; }; - define = derive2 { name="define"; version="0.2.7"; sha256="0m5nk6shfak43zw68vzc9ncl0a3rrrkhc5ckhb5yhjllj6g5yigf"; depends=[encode Hmisc latexpdf SASxport spec]; }; + define = derive2 { name="define"; version="0.2.8"; sha256="12xy1l1z1ilk85kbl7x4na99n6hc5axwrhpb6m6ipmbii4vv407v"; depends=[encode Hmisc latexpdf SASxport spec]; }; + deflateBR = derive2 { name="deflateBR"; version="1.1.2"; sha256="17zsy10k12gmffbk7nagi60xj347q0bf7wr885fiylqz2xiy9fl9"; depends=[dplyr httr lubridate]; }; deformula = derive2 { name="deformula"; version="0.1.1"; sha256="0h85yzl8kvjwrn1mkzyblvknf7gg8kx8y85qnvkwfbr9ik42ngn1"; depends=[]; }; degenes = derive2 { name="degenes"; version="1.1"; sha256="1xxn5j06qizywimrp1pl8z3yjdy1a167b9jnm77gmv87rp6j240c"; depends=[]; }; degreenet = derive2 { name="degreenet"; version="1.3-3"; sha256="07mkj2sdp09624mmb1x3djjypnrzn43qn2j4m93blli51j6zchm3"; depends=[igraph network]; }; @@ -5651,12 +5898,13 @@ in with self; { deltaPlotR = derive2 { name="deltaPlotR"; version="1.6"; sha256="15vjg3viyfrxvvh34p8i7j8p0vpg5628g8198adhi0i2ri3ygz9a"; depends=[MASS]; }; deltar = derive2 { name="deltar"; version="1.0.0"; sha256="1ki89ysz4qlq5z094ybg3aqfcb6g633ccvpj1cg6nri9z5qjwpm1"; depends=[Bchron]; }; demi = derive2 { name="demi"; version="1.1.2"; sha256="04dq4db9ibvv91nm0gz8dfbgv1gpmalf9hv6i78dwhh1xzjg1mig"; depends=[affxparser affy devtools oligo plyr R_utils]; }; - deming = derive2 { name="deming"; version="1.2"; sha256="0lhc9asly988j38d6pdz54b8yxzigrchnz57inj2my33cfbzp300"; depends=[boot]; }; + deming = derive2 { name="deming"; version="1.3"; sha256="0r5wx0cj6ym97jplvfyz36iig7zczdd6fiqf8g3vc4f53mqlhx9b"; depends=[boot]; }; demoKde = derive2 { name="demoKde"; version="0.9-4"; sha256="0p4v808m42wbv8ibdfqzm43cbbg0yl452wnm1mzqq2n37z6yljkr"; depends=[]; }; - demogR = derive2 { name="demogR"; version="0.5.0"; sha256="1y7pkf1m8fqjsvs0szyaqga2y7p3dvj0r85nz8nzqbmy4zrrv4w8"; depends=[]; }; + demogR = derive2 { name="demogR"; version="0.6.0"; sha256="06x82ffbdv6ifl8xh52d3npdwha67v1ylfjp78j5pa4wdqkg221b"; depends=[]; }; demography = derive2 { name="demography"; version="1.20"; sha256="097k0chs8shm1r9ny6jdx2kp2shyxsivjw1n1rhb3bs0m0l3vm9r"; depends=[cobs forecast ftsa mgcv rainbow RCurl strucchange]; }; - dendextend = derive2 { name="dendextend"; version="1.8.0"; sha256="1virn3c232xwcq3d0hhkgjh5gpzl01s39iwii5gxcm9mnsxjzdrh"; depends=[fpc ggplot2 magrittr viridis whisker]; }; - dendroTools = derive2 { name="dendroTools"; version="0.0.9"; sha256="192bzpq7zxnknkn7g6w10lsqdj5qk0dq2z0dpdripi768y63cdim"; depends=[brnn dplyr ggplot2 gridExtra knitr magrittr MLmetrics oce plotly reshape reshape2 RWeka scales]; }; + demu = derive2 { name="demu"; version="0.2.0"; sha256="0prfl2i3q2n5f4qpvkksyi8qvwj2fd9v82cr6val7abvcvbn9276"; depends=[ClusterR fields Matrix Rcpp RcppArmadillo spam]; }; + dendextend = derive2 { name="dendextend"; version="1.9.0"; sha256="1jiani6zwfajky2vafvay2hq158nh99rdrk3j00lycspds9v35fd"; depends=[fpc ggplot2 magrittr viridis whisker]; }; + dendroTools = derive2 { name="dendroTools"; version="1.0.1"; sha256="1ym8vkvi4b6wv6iygzbj1kiv54cayfixlmx1ilvs2cv794rbfmck"; depends=[brnn dplyr ggplot2 gridExtra knitr magrittr MLmetrics oce plotly reshape reshape2 RWeka scales]; }; dendroextras = derive2 { name="dendroextras"; version="0.2.3"; sha256="0hb7crbgsnbcwvbk05iz5ik45n7zgysmwjj6xc46131yd8l0i1qx"; depends=[]; }; dendrometeR = derive2 { name="dendrometeR"; version="1.0.0"; sha256="1par27ipgbfbrmdlwvkf82i5dgnfrcawmavakrf8lplin2hhb7gs"; depends=[forecast pspline zoo]; }; dendsort = derive2 { name="dendsort"; version="0.3.3"; sha256="1m4qh79ppfvipmbi8m8vwq0hqmwwipbg5izihz5j6x8a4g5i6iym"; depends=[]; }; @@ -5670,18 +5918,19 @@ in with self; { denstrip = derive2 { name="denstrip"; version="1.5.4"; sha256="0hzxphj740q6pfa1q42knr7n12bmnawg7b2fs74msxn83dka5cmq"; depends=[lattice]; }; depend_truncation = derive2 { name="depend.truncation"; version="3.0"; sha256="1jym52qxx8v4kbq2578d03q2593q96jccr85if47djikw0aaxmcr"; depends=[mvtnorm]; }; depmix = derive2 { name="depmix"; version="0.9.14"; sha256="12mvsd9zab55yg02r309h5i7hldwhh3bd60bzcvwip8vsmym5611"; depends=[MASS]; }; - depmixS4 = derive2 { name="depmixS4"; version="1.3-3"; sha256="0ls30v59hzyd684w4a3aygq1i5m8iq4gxsh8mmjxdq8qx0v84hk2"; depends=[MASS nnet Rsolnp]; }; + depmixS4 = derive2 { name="depmixS4"; version="1.3-5"; sha256="155bxfyhkmwz3asx1q8myvn3qjb3i2aq7pnw0r7kxygxzn071hkq"; depends=[MASS nnet Rsolnp]; }; depth = derive2 { name="depth"; version="2.1-1"; sha256="17fxv4a5fbb65p7kmb4iakik5ng6401y7gmknkfr66fmjq65i1sm"; depends=[abind circular rgl]; }; depth_plot = derive2 { name="depth.plot"; version="0.1"; sha256="0zjg9iyqmcnkvwc9w2j7lmk3k9nsg6n8m6vq5x44d1bp4g2gr6jv"; depends=[mvtnorm]; }; depthTools = derive2 { name="depthTools"; version="0.4"; sha256="1699r0h1ksgrlz9xafw2jnqfsc7xs0yaw97fc6dv3r11x6gxk00y"; depends=[]; }; dequer = derive2 { name="dequer"; version="2.0-1"; sha256="04kzlff8xa733qkkx0gacgig7d4l7yvgqmzva0mj8di12byh214p"; depends=[]; }; derivmkts = derive2 { name="derivmkts"; version="0.2.3"; sha256="0qw1xdn3mhz9kx4z352hdny2f46p3rx61hjk2ha5bibm8hnyzdpa"; depends=[mnormt testthat]; }; desc = derive2 { name="desc"; version="1.2.0"; sha256="1s6s13fk6sxwcj8wzkwxl9vr33153xx11p5wi9avqx3rzkabavz6"; depends=[assertthat crayon R6 rprojroot]; }; - descomponer = derive2 { name="descomponer"; version="1.4"; sha256="12zpkixclm6jmrgzvcy48c1mdqh9dgadzf9026wjyamphxkkjbip"; depends=[taRifx]; }; + descomponer = derive2 { name="descomponer"; version="1.5"; sha256="1dxnvignd3hwagkghvdiqfrkxlhyvxndprcyh8n9pmq8zgask5qk"; depends=[]; }; descr = derive2 { name="descr"; version="1.1.4"; sha256="05maviw8l8qhmy7p80gs3dlyy6pqk5k1686ny4xla4psj8mr7lbk"; depends=[xtable]; }; describer = derive2 { name="describer"; version="0.2.0"; sha256="1pjyihmn4gkaamixsc3qwynsc02pwv9bgn6s7z7acmmsybhhs6xn"; depends=[]; }; descriptr = derive2 { name="descriptr"; version="0.4.1"; sha256="1jpcfpidi49lyn02sl0hwsixzln9frrz03vrap1aq0phjcln39hh"; depends=[dplyr forcats ggplot2 magrittr rlang scales shiny tibble tidyr]; }; - desctable = derive2 { name="desctable"; version="0.1.2"; sha256="135v6gmrvmap71il13i5s0wsxddv8wyqb70ygl05jbmb3n4x61y7"; depends=[dplyr DT htmltools pander purrr]; }; + descstatsr = derive2 { name="descstatsr"; version="0.1.0"; sha256="1pz5lww1dkkqvsq6h0vkch39bj76qffmmag3zlag5in75s4wj0wl"; depends=[moments zoo]; }; + desctable = derive2 { name="desctable"; version="0.1.3"; sha256="1bc0xb7v1fnl91vbrh6xbqxnk1yq5ahxchlxb30dvpkjzycdnr4w"; depends=[dplyr DT htmltools pander purrr]; }; deseasonalize = derive2 { name="deseasonalize"; version="1.35"; sha256="1fjsa7g34dckjs6mx9b10m99byxagggm0p9pw2f1vmpjqlasin0l"; depends=[FitAR lattice]; }; desiR = derive2 { name="desiR"; version="1.2.1"; sha256="0ghcv96bbwn74mka4dpf2lkpnlikjn3q6lx2sl8bbw77nriap0n6"; depends=[]; }; designGG = derive2 { name="designGG"; version="1.1"; sha256="1x043j36llwd7kd4skbpl2smz2ybsxjqf5yd1xwqmardq60gdv2w"; depends=[]; }; @@ -5690,7 +5939,7 @@ in with self; { desirability = derive2 { name="desirability"; version="2.1"; sha256="094gxvp6a60lfcc0a0gk9rv1p6ajnzq9m58sy8cvhcj5337g4fmk"; depends=[]; }; desire = derive2 { name="desire"; version="1.0.7"; sha256="0jmj644nj6ck0gsk7c30af9wbg3asf0pqv1fny98irndqv508kf6"; depends=[loglognorm]; }; desplot = derive2 { name="desplot"; version="1.4"; sha256="0brmdp095zcwx7gncng1ls972kr67ldwiq081wyafn9jm9z461ix"; depends=[lattice reshape2]; }; - detect = derive2 { name="detect"; version="0.4-1"; sha256="0hq3imp4w6bd8x4njcfrvcs5lf0vrfnags1zdph86d7hlrwfds62"; depends=[Formula Matrix pbapply]; }; + detect = derive2 { name="detect"; version="0.4-2"; sha256="03xzv13y2l15afyp00lgvbh51vxg1jaakxjcbnsxzdgb11039x2g"; depends=[Formula Matrix pbapply]; }; detectRUNS = derive2 { name="detectRUNS"; version="0.9.5"; sha256="0w4pz7waaabgsb47xcmgiz8bzlrs2a83y3v6j7bqb5125y1wn8hw"; depends=[data_table ggplot2 gridExtra iterators itertools plyr Rcpp reshape2]; }; detector = derive2 { name="detector"; version="0.1.0"; sha256="010i063b94hzx7qac8gpl67gmk7hzgqm9i1c7pbbw4la3wcd9lz7"; depends=[stringr]; }; detpack = derive2 { name="detpack"; version="1.1.1"; sha256="0q7c01bjrvrlbrhb8vhkjw2f43jp46ny3jdyay0j760cfdaqb5zk"; depends=[]; }; @@ -5699,10 +5948,11 @@ in with self; { detzrcr = derive2 { name="detzrcr"; version="0.2.3"; sha256="09a8x7zphsk06n64qqbh840vrp89sza9vfnz08il6jdy77j02974"; depends=[ggplot2 MASS shiny]; }; devEMF = derive2 { name="devEMF"; version="3.6-1"; sha256="0lhf11bdgizhm2im13d0mc0ca834kg2cyabz92jp4mmhjvglrgf3"; depends=[]; }; devFunc = derive2 { name="devFunc"; version="0.1"; sha256="0f2s5gssk9napmah7zcss1rnh7pzlq90gzwcnvyr9rrq6k118n8q"; depends=[plyr stringr]; }; - devRate = derive2 { name="devRate"; version="0.1.7"; sha256="1vmq467a60fz45fwdp0qs51fzdrdyj61vvdlk82046akzs8mvjvy"; depends=[]; }; - devtools = derive2 { name="devtools"; version="1.13.6"; sha256="1d9n49djydywfyp9w3njgxs5lag4ac7719wmxy1lkgcmn3l9sx5r"; depends=[digest git2r httr jsonlite memoise rstudioapi whisker withr]; }; - dexter = derive2 { name="dexter"; version="0.8.0"; sha256="1lnhgy3ji6qa9qw0hdv4r8m4igcsasg0fx1kkz8lr80hxdg98zc3"; depends=[colorspace DBI dbplyr dplyr DT fastmatch purrr RColorBrewer rlang rprintf RSQLite shiny shinyBS shinydashboard tibble tidyr]; }; - dextergui = derive2 { name="dextergui"; version="0.1.3"; sha256="0k0dvsb5vvbhw2x57kgsifpiv9jrglapxzillj0nglg8i71wwypg"; depends=[Cairo DBI dexter dplyr DT ggExtra ggplot2 ggridges htmltools htmlwidgets igraph jsonlite networkD3 RColorBrewer RCurl readODS readxl rlang shiny shinyBS shinyFiles shinyjs tibble tidyr writexl]; }; + devRate = derive2 { name="devRate"; version="0.1.9"; sha256="1dy9hfhhlxj5sim69870dkwrarrl5pvmfvls8ys43h300my331gp"; depends=[]; }; + devtools = derive2 { name="devtools"; version="2.0.1"; sha256="1nyspqicn9zd1rgq3k07b3179i8w5ys6jbd65g9q8qczrb7z3x8f"; depends=[callr cli digest git2r httr jsonlite memoise pkgbuild pkgload rcmdcheck remotes rstudioapi sessioninfo usethis withr]; }; + dexter = derive2 { name="dexter"; version="0.8.1"; sha256="0lkx1prngds2jcqw9b504as1q80ghgncms0sldw2pdgmklncha6l"; depends=[colorspace DBI dbplyr dplyr DT fastmatch purrr RColorBrewer rlang rprintf RSQLite shiny shinyBS shinydashboard tibble tidyr]; }; + dexterMST = derive2 { name="dexterMST"; version="0.1.0"; sha256="0c9djz8n38x9ff9yh8ah77a4nnhanyqxnbzhi5i77si0zk8p7505"; depends=[crayon DBI dbplyr dexter dplyr fastmatch igraph Rcpp rlang RSQLite tibble tidyr]; }; + dextergui = derive2 { name="dextergui"; version="0.1.4"; sha256="0im7ych6wypjrywmzwk5d40ak87rbaqqql4rq8zf10ysai4j9gwm"; depends=[Cairo DBI dexter dplyr DT ggExtra ggplot2 ggridges htmltools htmlwidgets igraph jsonlite networkD3 RColorBrewer RCurl readODS readxl rlang shiny shinyBS shinyFiles shinyjs tibble tidyr writexl]; }; df2json = derive2 { name="df2json"; version="0.0.2"; sha256="10m7xn7rm4aql1bzpckjcx5kvdw44m1pxgzqkgkd40lzqb1cwk18"; depends=[rjson]; }; dfCompare = derive2 { name="dfCompare"; version="1.0.0"; sha256="1lhx69j0bkjbnp5jz23hrbxjcf04vf3big4k593ixz003xs2077f"; depends=[]; }; dfcomb = derive2 { name="dfcomb"; version="2.5-0"; sha256="16wa7shc5rw8sax0x94i0lvg1h4wnq51mqdvsc5z8a5ki84jxlra"; depends=[BH Rcpp RcppArmadillo RcppProgress]; }; @@ -5713,27 +5963,30 @@ in with self; { dfoptim = derive2 { name="dfoptim"; version="2018.2-1"; sha256="1gya0sx8ajy04kscds06d6m9prxdwr1dmyfc6awsm6r1jwbibzb3"; depends=[]; }; dfped = derive2 { name="dfped"; version="1.1"; sha256="11ffsah14igba276m9d3cla0kgb3isizm5d7j1iqcd0wq23il7hq"; depends=[ggplot2 rstan]; }; dfphase1 = derive2 { name="dfphase1"; version="1.1.1"; sha256="0bk4bl5lqd7m4mzk6kg71fmh918wcy85zghr3lyayxlk30fl4ppc"; depends=[lattice Rcpp robustbase]; }; - dfpk = derive2 { name="dfpk"; version="3.4.1"; sha256="1nmn5ir20wx3qvcf9rvnwnni5kqbn8adhc2354fb5gcvbnxlc7mc"; depends=[BH dfcrm ggplot2 PK Rcpp RcppEigen rstan StanHeaders]; }; + dfpk = derive2 { name="dfpk"; version="3.5.0"; sha256="1jl1ddi7kq1w95gvz3j4a4yxvnjk3ml7vqvb83lqzkb1ms8wlxw3"; depends=[BH dfcrm ggplot2 PK Rcpp RcppEigen rstan StanHeaders]; }; dga = derive2 { name="dga"; version="1.2"; sha256="13mfampnghcs5xplzq69bw948lqhw561pn54j3gb0ydsg5bm5vmr"; depends=[chron]; }; dggridR = derive2 { name="dggridR"; version="2.0.3"; sha256="1gdwxrl5c5mprfk7rx5mk8davi4mmg1crccxaaipnbnsilg9j9vh"; depends=[dplyr ggplot2 Rcpp rgdal sp]; }; - dglars = derive2 { name="dglars"; version="2.0.1"; sha256="18iypbvk805xh0ybwawwvswsp086q2kjj2cmk1yhlq810260j686"; depends=[Matrix]; }; + dglars = derive2 { name="dglars"; version="2.1.0"; sha256="1miqrsb1k36mcfvwf4i94z7sn3qq6wkikwv3fiyzyd2q7ny9a068"; depends=[Matrix]; }; dglm = derive2 { name="dglm"; version="1.8.3"; sha256="0vj4vddqcrjzgqsi6zsxm22gj5pa5dm50wcxip4vi8kbwxaahnaj"; depends=[statmod]; }; dgmb = derive2 { name="dgmb"; version="1.2"; sha256="1r5md917wipx78n63x87fpvsc3h87c68cpacrrs9dhss199p1a5k"; depends=[abind MASS]; }; - dgo = derive2 { name="dgo"; version="0.2.14"; sha256="0pizzyqgnng3g5g9q2qa5wcwfdl94rz69ah071qx01k03fzayg86"; depends=[assertthat data_table dgodata ggplot2 lubridate R6 rstan survey]; }; + dgo = derive2 { name="dgo"; version="0.2.15"; sha256="16z3vag1fwsnmynqh0zpwq5qp5ac3xf4787lwqy7asx8qgcc3wmw"; depends=[assertthat data_table dgodata ggplot2 lubridate R6 rstan survey]; }; dgodata = derive2 { name="dgodata"; version="0.0.2"; sha256="03cyiig8pn7fdkrkrd29cwy5g63bp57bpl9jmdxfi03smngzbz0m"; depends=[]; }; dgof = derive2 { name="dgof"; version="1.2"; sha256="02qnb3i131hx05k8l5n3xbl5sqmmc2fh19bsgcacgj8ixs4wyjvi"; depends=[]; }; dhga = derive2 { name="dhga"; version="0.1"; sha256="1n48irj53g3kn451ak5ly50wxdn7qmzi2kib8clsvcx2n7mvpgcm"; depends=[VennDiagram]; }; + dhglm = derive2 { name="dhglm"; version="2.0"; sha256="1918wkylldcdxjggly3a4yh4cv2nkig5bjfx0j79av633hahlg92"; depends=[boot car MASS Matrix sandwich]; }; + dhh = derive2 { name="dhh"; version="0.0.1"; sha256="00kg2x1was85aq2vr15bak8y5p4mymbs8pbriijlbw64401djmb0"; depends=[]; }; di = derive2 { name="di"; version="1.1.4"; sha256="1w2gjhyi410z98d8wnhbd69jxm69nz4pmnr4fb09i70a90f53s25"; depends=[scales]; }; diagis = derive2 { name="diagis"; version="0.1.3-1"; sha256="1cagcr5znhrg4fp96d79ly0z7bs3hhh3zfspclyfc88p2p3qsd96"; depends=[coda ggplot2 gridExtra Rcpp RcppArmadillo]; }; diagmeta = derive2 { name="diagmeta"; version="0.2-0"; sha256="1qdpsn0c4g459p8p90p2a9fghiwjqqmmanz3zsa5a3lv7zxmk496"; depends=[lme4 meta]; }; diagonals = derive2 { name="diagonals"; version="0.4.0"; sha256="03n6lm0hkgylswgj1qlgrjigm7basl5frip99mxx19mvaqa3bhqy"; depends=[]; }; diagram = derive2 { name="diagram"; version="1.6.4"; sha256="0f6ffprn5k0ir1s7m9s7izc64aa17r3gnygagz5bihrlsvawaavw"; depends=[shape]; }; + dials = derive2 { name="dials"; version="0.0.1"; sha256="09bi7smr1cfhnm42n31bjpxni74nay34a1vkvqcfc587g5i5x5bq"; depends=[dplyr glue purrr rlang scales tibble]; }; diaplt = derive2 { name="diaplt"; version="1.3.0"; sha256="1kkqhkv3s8rrpqd05jidjdnqmlnb3s9f8rr34rfqj7k4nh0qzzcz"; depends=[]; }; dice = derive2 { name="dice"; version="1.2"; sha256="0gic7lqnsdmwv3dbzwwmcwdfyfqlq8kpr2pciqphd1j2ligzwl3s"; depends=[gtools]; }; diceR = derive2 { name="diceR"; version="0.5.1"; sha256="0r3sj6qkkj6yqz21jcbjylqsr8n6yhghix2568gffckcijzgppar"; depends=[abind apcluster assertthat blockcluster caret class cli clue cluster clusterCrit clValid dbscan dplyr e1071 flux ggplot2 gplots Hmisc infotheo kernlab klaR kohonen magrittr mclust NMF progress purrr quantable RankAggreg RColorBrewer Rcpp Rtsne sigclust stringr tibble tidyr]; }; dichromat = derive2 { name="dichromat"; version="2.0-0"; sha256="1l8db1nk29ccqg3mkbafvfiw0775iq4gapysf88xq2zp6spiw59i"; depends=[]; }; dicionariosIBGE = derive2 { name="dicionariosIBGE"; version="1.6"; sha256="1rss1ydhcn6sma2lmlpq6s0h3dglwc20w499x1jzkcjnzc1rc7gl"; depends=[]; }; - did = derive2 { name="did"; version="1.0.0"; sha256="0fgwassb8m92iij78f045fl8441f1x9dhf4hnc93wl16yv5hh7g7"; depends=[BMisc formula_tools ggplot2 gridExtra knitr MASS pbapply]; }; + did = derive2 { name="did"; version="1.2.0"; sha256="18x8h50zph7xahqd2d9q1269ch8lgzcl5lflhl7860v3yk947zpa"; depends=[BMisc ggplot2 gridExtra knitr MASS pbapply]; }; didrooRFM = derive2 { name="didrooRFM"; version="1.0.0"; sha256="12clfnbm56jwldw0afb0nb0argnd97mx7369jiywhxy0p4xqibqq"; depends=[dplyr]; }; dief = derive2 { name="dief"; version="1.1"; sha256="0x3dwlfi130wmbsmm8vf66qxqn001b07yaiq6mp1s707dnl131mc"; depends=[flux fmsb ggplot2 plyr]; }; dielectric = derive2 { name="dielectric"; version="0.2.3"; sha256="1p1c0w7a67zxp1cb99yinylk5r1v89mmpfybcy94ydydhydbhivk"; depends=[]; }; @@ -5746,20 +5999,20 @@ in with self; { diffMeanVar = derive2 { name="diffMeanVar"; version="0.0.6"; sha256="0zivbd22hp0biy4vnjh21f4djfg5bl9az0wlhn47rk7fw65rgipb"; depends=[Biobase lawstat MASS methylumi missMethyl]; }; diffMeshGP = derive2 { name="diffMeshGP"; version="0.1.0"; sha256="1dc37hxh3fi27gw11kij57j78p87bza77s82niagdv6dqhldj5a4"; depends=[]; }; diffdepprop = derive2 { name="diffdepprop"; version="0.1-9"; sha256="0mgrm1isr26v2mcm6fkzc7443ji00vpnqmw4zngx81n7442b3cl2"; depends=[gee PropCIs rootSolve]; }; - diffdf = derive2 { name="diffdf"; version="1.0.0"; sha256="1qb27pkjs9bapwgqlb1kablcz54hs4cg0mmf2sisl1b8q4j68q96"; depends=[tibble]; }; - diffeR = derive2 { name="diffeR"; version="0.0-4"; sha256="08g21h3yq8rm2i6ah364nfadg7hnghc21jnpi5aqwzqyd2v93b67"; depends=[ggplot2 raster rgdal]; }; + diffdf = derive2 { name="diffdf"; version="1.0.1"; sha256="05kl841h9lcirp874g7ny1xjijd1dpdqxwyzwwqwpcvibf69pprm"; depends=[tibble]; }; + diffeR = derive2 { name="diffeR"; version="0.0-5"; sha256="1r1klvi83qp5xaxna3l2v48zjj5ngfcrq535m1crnmsjj4iwqilv"; depends=[ggplot2 raster reshape2 rgdal]; }; diffee = derive2 { name="diffee"; version="1.1.0"; sha256="01lb1prz70mxgymhhsvx48kbfy69xyyaabsmfhf28af9wfb89662"; depends=[igraph pcaPP]; }; diffeqr = derive2 { name="diffeqr"; version="0.1.1"; sha256="1zvjl2i38nyhk63bncqc5cva1m40sm692w7a36qc455s2jnskfh8"; depends=[JuliaCall stringr]; }; - diffobj = derive2 { name="diffobj"; version="0.1.10"; sha256="1y3fijswy9fw7q9xdv8cz9vm279av2hlzwbq8fc8lffwrbfl1zs1"; depends=[crayon]; }; + diffobj = derive2 { name="diffobj"; version="0.1.11"; sha256="1aqdb4q3zixf2xg9q0387vp2xrmfwl7h5j5wnlr0mxwbxv8423ly"; depends=[crayon]; }; diffpriv = derive2 { name="diffpriv"; version="0.4.2"; sha256="12q2v93369bshid83rsy1csbr9ay6rfpd8zdxm12zi7py3f9sjs8"; depends=[gsl]; }; diffr = derive2 { name="diffr"; version="0.1"; sha256="0ydwnpyzirynffsnvip667y0jqzy7yfqlfpqhb38xvmd9rmwfbp8"; depends=[htmlwidgets]; }; diffractometry = derive2 { name="diffractometry"; version="0.1-10"; sha256="09mkqg6avky26c2dsnhpcmby76hfqg0pwmnjhkbp4px2k6c9inrc"; depends=[]; }; diffrprojects = derive2 { name="diffrprojects"; version="0.1.14"; sha256="1mnqf5zs1w8dx9y5iwn4blyzb9j60ayzc04zxj5l8804nd527n25"; depends=[dplyr hellno magrittr R6 Rcpp RSQLite rtext stringb stringdist]; }; diffrprojectswidget = derive2 { name="diffrprojectswidget"; version="0.1.5"; sha256="1h69mc1wayi80vz4b9cqydylf4kp9mxsigv05r0f903pqakdrzcw"; depends=[diffrprojects dplyr hellno htmlwidgets jsonlite magrittr tidyr]; }; diffusion = derive2 { name="diffusion"; version="0.2.7"; sha256="1j9s9vw5sc4k956bk4yp3bf4fnp7lhhkwcvlzvsh1w4dyaj8l35h"; depends=[dfoptim nloptr systemfit]; }; - diffusionMap = derive2 { name="diffusionMap"; version="1.1-0"; sha256="1l985q2hfc8ss5afajik4p25dx628yikvhdimz5s0pql800q2yv3"; depends=[igraph Matrix scatterplot3d]; }; + diffusionMap = derive2 { name="diffusionMap"; version="1.1-0.1"; sha256="11l4kbciawvli5nlsi4qaf8afmgk5xgqiqpdyhvaqri5mx0zhk5j"; depends=[igraph Matrix scatterplot3d]; }; diffusr = derive2 { name="diffusr"; version="0.1.4"; sha256="1f3h387kblw1xzdnxphwgfl1n7f6i07kk7kfslvbfxkalbish6ii"; depends=[igraph Rcpp RcppEigen]; }; - digest = derive2 { name="digest"; version="0.6.15"; sha256="1ia4ak956gnn0f5aqhwgam6g9z6f1y57zz8jv45jc8h79yxp8bl8"; depends=[]; }; + digest = derive2 { name="digest"; version="0.6.18"; sha256="0k3iv0r8wy8w7zchmgrnrqv3bc149075j4817kf0q521vi4f6vbj"; depends=[]; }; digitalPCR = derive2 { name="digitalPCR"; version="1.1.0"; sha256="0hwqq84yr1hnvf4bygc5425887dhqjjjyy1ils71iavcal04s8pb"; depends=[]; }; digitize = derive2 { name="digitize"; version="0.0.4"; sha256="1qw4x4z9vrs79sd9b2daw668nc6nvjl4qhayfqmd87yxa2ydv6x0"; depends=[readbitmap]; }; dils = derive2 { name="dils"; version="0.8.1"; sha256="1q6ba9j14hzf7xy895mzxc6n9yjgind55jf350iqscwzxf7ynp33"; depends=[igraph Rcpp]; }; @@ -5767,13 +6020,15 @@ in with self; { dina = derive2 { name="dina"; version="1.0.2"; sha256="1dgjny7ik2g15zbi3ywl0xbab6vnv5qkxfrb4x79w7lic5m90ldc"; depends=[Rcpp RcppArmadillo]; }; dinamic = derive2 { name="dinamic"; version="1.0"; sha256="0mx72q83bbwm10ayr3f1dzwr5wgz7gclw7rh39yyh95slg237nzr"; depends=[]; }; dineq = derive2 { name="dineq"; version="0.1.0"; sha256="1xrhrdc970f7hm9xng9z7xmshnmmz89cn3gmnyabzprx44ccr9sl"; depends=[boot Hmisc]; }; + dint = derive2 { name="dint"; version="2.0.0"; sha256="1rrkf1j7vdnxskmjzh41shwxmcy624qrhipfpdvp76ijf1hf32vk"; depends=[]; }; diptest = derive2 { name="diptest"; version="0.75-7"; sha256="0rcgycgp0bf8vhga1wwgfcz3pqs5l26hgzsgf2f97dwfna40i1p1"; depends=[]; }; directPA = derive2 { name="directPA"; version="1.3"; sha256="0hcs56y69gdkfyk2xl0vxh01c19s6z1lfv02g056wxr24qfsx08c"; depends=[calibrate rgl]; }; directlabels = derive2 { name="directlabels"; version="2018.05.22"; sha256="0xcpc56ssb9430b0xcdhayk3qaak2qcakyss2pz14y5w2027hblv"; depends=[quadprog]; }; + directotree = derive2 { name="directotree"; version="1.0.0"; sha256="1yv703mb3fnvjxr2rrxvb8x869hbbjx4l94qbbsmy0ssknayq60y"; depends=[collapsibleTree data_tree]; }; dirichletprocess = derive2 { name="dirichletprocess"; version="0.2.1"; sha256="0ip7mcjddqg7z9hqrvbxixvkqp9j4d92zgpk6hn6acd4fxhb17r6"; depends=[ggplot2 gtools mvtnorm]; }; dirmcmc = derive2 { name="dirmcmc"; version="1.3.3"; sha256="117p3jvinmha7a2phcpzq38ig05kcranp15xbxqvv0cgh3c95fjr"; depends=[mcmcse]; }; dirmult = derive2 { name="dirmult"; version="0.1.3-4"; sha256="1r9bhw1z0c1cgfv7jc0pvdx3fpnwplkxwz8j8jjvw14zyx803rnz"; depends=[]; }; - discSurv = derive2 { name="discSurv"; version="1.3.1"; sha256="0vq3g42xy97ksgsghhz232spkbkr2zs8i9nm7xwdabysi9fgqdsv"; depends=[functional mgcv mvtnorm]; }; + discSurv = derive2 { name="discSurv"; version="1.3.4"; sha256="0xawvadgy5lkzhk60kb4ga1gh4niqpr9p6wxgrp88mbwp7q600kl"; depends=[functional mgcv mvtnorm]; }; discgolf = derive2 { name="discgolf"; version="0.2.0"; sha256="07clh1awnibgrh7vl4a51r8dbya2rbmicm8v8x8mq8h8am2b3j0s"; depends=[crul jsonlite xml2]; }; disclap = derive2 { name="disclap"; version="1.5"; sha256="0piv9gxhxcd4pbh5qjn9c3199f32y3qiw5vy8cr77ki70dnmr66n"; depends=[]; }; disclapmix = derive2 { name="disclapmix"; version="1.7"; sha256="11qkk5bl5x3axyfdzm1hw522g643mmvk5qg7g3sc3licfvsn32i1"; depends=[cluster disclap MASS Rcpp RcppProgress]; }; @@ -5784,10 +6039,10 @@ in with self; { discretecdAlgorithm = derive2 { name="discretecdAlgorithm"; version="0.0.5"; sha256="1q4g455jjg293yxdwdppw04ah15idk5j233x2kbqv0jni4v0l2bf"; depends=[igraph Rcpp RcppEigen sparsebnUtils]; }; discretization = derive2 { name="discretization"; version="1.0-1"; sha256="00vq2qsssnvgpx7ihbi9wcafpb29rgv01r06fwqf9nmv5hpwqbmp"; depends=[]; }; discrimARTs = derive2 { name="discrimARTs"; version="0.2"; sha256="088v4awic4bhzqcr7nvk2nldf8cm1jqshg2pzjd2l2p1cgwmlxib"; depends=[RUnit]; }; - diseasemapping = derive2 { name="diseasemapping"; version="1.4.2"; sha256="065ndvpx3q9ycxfjl1f2iy3s23d7qf27s1qz31ppx0n929jynn6n"; depends=[sp]; }; + diseasemapping = derive2 { name="diseasemapping"; version="1.4.6"; sha256="16y2w8qjq442qdbqlrg3s2mn53rlcipl22m3q168gda5klm4f7sl"; depends=[sp]; }; diskImageR = derive2 { name="diskImageR"; version="1.0.0"; sha256="1r19k5fdjn6vkn11p5df77fnxfqaz3nciiaai0f3pr2bgpfppzka"; depends=[subplex zoo]; }; dismo = derive2 { name="dismo"; version="1.1-4"; sha256="1j4pzbyvn8msi3k2y79nc6pqlrald46168ibznjwrr6rdiqhy4gj"; depends=[raster sp]; }; - dispRity = derive2 { name="dispRity"; version="1.0.3"; sha256="1swix45fcr0hn21pvy2dwsnbr60bvsdjk8vwh432p0s69c372m3l"; depends=[ade4 ape geiger geometry geoscale paleotree phangorn phyclust vegan]; }; + dispRity = derive2 { name="dispRity"; version="1.2"; sha256="1dihcb5smsjl57562vnm9w63izbzl22vr0ky5far66cxz0y6di2k"; depends=[ade4 ape geiger geometry geoscale mnormt paleotree phangorn phyclust vegan]; }; disparityfilter = derive2 { name="disparityfilter"; version="2.2.3"; sha256="0dkk3qws631mf0g02di5rsrvh5954cykysyri0g8aqgik0j9dg06"; depends=[igraph]; }; displayHTS = derive2 { name="displayHTS"; version="1.0"; sha256="0mqfdyvn2c5c3204ykyq29ydldsq0kb3a1d7mrzqr7cvrj1ahlqa"; depends=[]; }; dispmod = derive2 { name="dispmod"; version="1.2"; sha256="16r6is0pchzc9mxpz0c44f72j76vsh3j9damalcxajrha06dkdq4"; depends=[]; }; @@ -5795,119 +6050,126 @@ in with self; { dissUtils = derive2 { name="dissUtils"; version="1.0"; sha256="00fzlmkdfw2s3k824wp2pk3v7cvxnywi1hfp86g4mm95z2qlw9br"; depends=[]; }; dissever = derive2 { name="dissever"; version="0.2-3"; sha256="1lgs5nmv3lpm4gsryxvcwiwibvvg9flv23q8maisp77x49c18qcp"; depends=[boot caret dplyr foreach magrittr plyr raster sp viridis]; }; distance_sample_size = derive2 { name="distance.sample.size"; version="0.0"; sha256="0hlf3kp34rg1gnkxp4k3rnv0shv4fpgb0rhx3a6x5692lhyigbcs"; depends=[MASS]; }; - distances = derive2 { name="distances"; version="0.1.2"; sha256="17872h4jw6cgdk40vczjlygnays2v0wdh64mz5isk7zkvqs0x1ld"; depends=[]; }; + distances = derive2 { name="distances"; version="0.1.4"; sha256="0axh75s0l478nlgd2sd1nxbmpx0iw1wi5aaa6b24hy1v3bizazbn"; depends=[]; }; distcomp = derive2 { name="distcomp"; version="1.0-1"; sha256="0f69bxw52ai39dmkmfvrs0lbibcgmv6n849xa9xgd2jm5mvbc58f"; depends=[digest httr jsonlite R6 shiny stringr survival]; }; distcrete = derive2 { name="distcrete"; version="1.0.3"; sha256="0sa6z2mpmk51ig1r7bmpbyv2jd8z6z7mixki2vlq1kybg8cx3wmi"; depends=[]; }; + distdichoR = derive2 { name="distdichoR"; version="0.1-1"; sha256="0v19m3n1jgipg65yrv75rm4v27b5aq58cbsmbp7lxvfxmj5ra328"; depends=[boot emmeans nlme sn]; }; distdrawr = derive2 { name="distdrawr"; version="0.1.3"; sha256="1c8wznfml8k5gwyanfg7rqr22a96xx8rgm7f4z3bv5gsgsbps49y"; depends=[]; }; distfree_cr = derive2 { name="distfree.cr"; version="1.5.1"; sha256="0h7cywxnasxmqnl9f2f9wp4viwvv72hjx2drr78prqy3nn3lvqwx"; depends=[]; }; distillery = derive2 { name="distillery"; version="1.0-4"; sha256="1m0pgmlvk7bsb6q3kxagnq422babk61sf73naavac68v8x2q8fix"; depends=[]; }; + disto = derive2 { name="disto"; version="0.2.0"; sha256="09pafy8y1ifgglqmal32dy34acx06ypsq2bgwsn6fjiqr9kw401j"; depends=[assertthat broom dplyr factoextra fastcluster fastmatch ggplot2 pbapply proxy tidyr]; }; distory = derive2 { name="distory"; version="1.4.3"; sha256="1mszk8fv1z46d7y1q37mhq9b5yk39w2i9rq6mgdf03afdslrmrip"; depends=[ape]; }; - distr = derive2 { name="distr"; version="2.6.2"; sha256="1x118v7ycw33mkwy9frw38yn7a6ihghpssz6r2nj5766ab93i89s"; depends=[MASS sfsmisc startupmsg SweaveListingUtils]; }; - distrDoc = derive2 { name="distrDoc"; version="2.6"; sha256="19yjns5cv2jp551kbld30xmdzljxr0lj5gps0lxfv8d7mrj09kf7"; depends=[distr distrEx distrMod distrSim distrTeach distrTEst MASS RandVar startupmsg SweaveListingUtils]; }; - distrEllipse = derive2 { name="distrEllipse"; version="2.6.2"; sha256="1rhpnwsml7vs2nkn4q4203fi0qwfc4pxgva0b4z30zzhywb0p3hg"; depends=[distr distrEx distrSim mvtnorm setRNG startupmsg]; }; - distrEx = derive2 { name="distrEx"; version="2.6.1"; sha256="088a7pvkpndwdg22gmh6ypi5s2fw2gqc47njlvw5gyxfdm9gcdy5"; depends=[distr startupmsg]; }; - distrMod = derive2 { name="distrMod"; version="2.6.1"; sha256="1i7b08i8zjv2k4p2j1nlqbyjrcapf52k2my83i75hcrjqdy8r3sv"; depends=[distr distrEx MASS RandVar sfsmisc startupmsg]; }; - distrRmetrics = derive2 { name="distrRmetrics"; version="2.6"; sha256="077ryxl6l6fql81nsl7dm16pawsqd0l6ljfpkrnzjab4mljqaxgp"; depends=[distr fBasics fGarch startupmsg]; }; - distrSim = derive2 { name="distrSim"; version="2.6"; sha256="1kq85ivnw4mplpr2jmc2w19kvk0d1wffz6laypay2j5gyd8fm44x"; depends=[distr setRNG startupmsg]; }; - distrTEst = derive2 { name="distrTEst"; version="2.6"; sha256="1c0xwpyr5gs89psiflcz5dplsb1g9r651jiqg8nxcqa05r9kyhkr"; depends=[distrSim setRNG startupmsg]; }; + distr = derive2 { name="distr"; version="2.7.0"; sha256="0z822y1mj8h368k1iclnaviz6m6wgnl97jwgisb8qah98f4dbmwh"; depends=[MASS sfsmisc startupmsg]; }; + distrDoc = derive2 { name="distrDoc"; version="2.7.1"; sha256="0zbj550lflq0i7i900cb3ybrcik40ahsjz24yf5jnxvx397glsfx"; depends=[distr distrEx distrMod distrSim distrTeach distrTEst MASS RandVar startupmsg]; }; + distrEllipse = derive2 { name="distrEllipse"; version="2.7.0"; sha256="0k6jicf8411jzyv9hi63qng9mq6bbil2qgwy7lijgvy2dr4d0niw"; depends=[distr distrEx distrSim mvtnorm setRNG startupmsg]; }; + distrEx = derive2 { name="distrEx"; version="2.7.0"; sha256="0mhf79fxwvy8x261ckfz93z05f2dn8p70hpdzn47xyh7z8dg38gd"; depends=[distr startupmsg]; }; + distrMod = derive2 { name="distrMod"; version="2.7.0"; sha256="14c2djk3faw4z1b4fgwpk35qfyvix7b5jcaglc9g6rx43f8h81hp"; depends=[distr distrEx MASS RandVar sfsmisc startupmsg]; }; + distrRmetrics = derive2 { name="distrRmetrics"; version="2.7.0"; sha256="01z3vm5qfnrp5qd518f7h7dynjjg3am0hrk7zqv8kjzxgsisgnq9"; depends=[distr fBasics fGarch startupmsg]; }; + distrSim = derive2 { name="distrSim"; version="2.7.0"; sha256="1fihq54kng7icqs6z27rdrykql00c33f0d8cznbizjsz6ipm94d6"; depends=[distr setRNG startupmsg]; }; + distrTEst = derive2 { name="distrTEst"; version="2.7.0"; sha256="19w92php04fp3c4ip7zz2zs210h4dp9nj3g3ddq26hlh7ng9kk85"; depends=[distrSim setRNG startupmsg]; }; distrTeach = derive2 { name="distrTeach"; version="2.6.1"; sha256="0x60xlij1m9q7xhi9vnf61vb2px9aah8iqaki6d87c1pxylmqnvr"; depends=[distr distrEx startupmsg]; }; distrom = derive2 { name="distrom"; version="1.0"; sha256="0wylw7yaylf5j8cy8g45jrw91mwx6w0i7vf9ysnj5kxyznq1gl6y"; depends=[gamlr Matrix]; }; distrr = derive2 { name="distrr"; version="0.0.4"; sha256="0nywvgcbk2i2n2qa80yk68zikl2fs7nybhq540808rjksldh9pvy"; depends=[dplyr lazyeval magrittr tidyr]; }; + divDyn = derive2 { name="divDyn"; version="0.6.1"; sha256="04l342jz34q3fcmibdj0zr53w6zp65p3al0w1qd8diq09z1388gc"; depends=[Rcpp]; }; divagis = derive2 { name="divagis"; version="1.0.0"; sha256="1kcz7i3h9xxpqhlq0rl08pgcwd16ygjjmm0jjv9knn2ggc3j1jzz"; depends=[rgdal sp]; }; diveMove = derive2 { name="diveMove"; version="1.4.4"; sha256="0mq3nkcn1w8mry9lda6fkycb1a5qmkyzpckwxbrvsyc5kyyx755c"; depends=[caTools geosphere KernSmooth quantreg uniReg]; }; diveRsity = derive2 { name="diveRsity"; version="1.9.90"; sha256="11pfq3syvjmfwfimjc2jnlprcnynvargr4yjd8h0aa6qzgdrrx5q"; depends=[ggplot2 qgraph Rcpp shiny]; }; diverse = derive2 { name="diverse"; version="0.1.5"; sha256="10kmx3qv58xhqs1icsxqq0y0cm8y2hx9ysb65brd3hhg33alzvk3"; depends=[foreign proxy reshape2]; }; diversitree = derive2 { name="diversitree"; version="0.9-10"; sha256="0gh4rcrp0an3jh8915i1fsxlgyfk7njywgbd5ln5r2jhr085kpz7"; depends=[ape deSolve Rcpp subplex]; }; - divest = derive2 { name="divest"; version="0.6.0"; sha256="0j7glxg2sp1x11mlfrl0fciqp9w6jwf2j7s1sxchaw1b2rm0nklm"; depends=[Rcpp RNifti]; }; + divest = derive2 { name="divest"; version="0.7.1"; sha256="0ih61l7lncs6lzszwshxnnn9wvpac5zfdaamax9hqkz171zq2gnw"; depends=[Rcpp RNifti]; }; divo = derive2 { name="divo"; version="1.0.0"; sha256="0xy4yxvx2grskdzb5z73mhgrq0nfhdkm2hxahdns7pb1fgajxyjx"; depends=[cluster]; }; dixon = derive2 { name="dixon"; version="0.0-6"; sha256="1prvr16a9n7qyaznir2bl7mg6nlvbdv9pk75p3xipzjg36hwyam8"; depends=[spatstat splancs]; }; dkDNA = derive2 { name="dkDNA"; version="0.1.1"; sha256="0ycyzn5bmhjl5idp0lndffkninpm9n23wrkrzi59ac8z8ghsnhf4"; depends=[]; }; - dkanr = derive2 { name="dkanr"; version="0.1.1"; sha256="15vvfvhs715aczb0g1prgvynzx0xcmqvq7ancqcjw89al40zaiyc"; depends=[assertthat dplyr httr jsonlite purrr stringr tibble]; }; + dkanr = derive2 { name="dkanr"; version="0.1.2"; sha256="1936jhj95cqsa6n8yw7zg8hh8m4ld5ajgwb94r5w5w8lfwdficli"; depends=[assertthat dplyr httr jsonlite purrr stringr tibble]; }; dlib = derive2 { name="dlib"; version="1.0.3"; sha256="1is8j1gwf22n7yixg40rb6p4mrnbzijwfjl6vsniq8qkyy7z8k32"; depends=[Rcpp]; }; dlm = derive2 { name="dlm"; version="1.1-5"; sha256="1aksm66sfa7ipl5xgs4j5giac7q2m744wjl40mva56xn6i674h4r"; depends=[]; }; dlmap = derive2 { name="dlmap"; version="1.13"; sha256="0s6wlkggkm3qndwyvw72xv1n0mcjb7ss3ajbq2ll6rv30splq0db"; depends=[ibdreg mgcv nlme qtl wgaim]; }; - dlnm = derive2 { name="dlnm"; version="2.3.4"; sha256="08k9x29iakgnzf4zbj6bgv6i4812mhbgraxm468wvv8ia574dm1m"; depends=[mgcv nlme tsModel]; }; - dlookr = derive2 { name="dlookr"; version="0.3.0"; sha256="00yxv2wfprqpsjd4c9q330agy1q3iqi4lnqk8xz62bnqizb0v3hm"; depends=[classInt corrplot DMwR dplyr ggplot2 gridExtra kableExtra knitr magrittr mice moments prettydoc purrr randomForest RcmdrMisc RColorBrewer rlang rmarkdown rpart smbinning tibble tidyr tidyselect tinytex xtable]; }; - dlsem = derive2 { name="dlsem"; version="2.3"; sha256="1v7p6d2ylpvq69sbgicznmzsfsv08nivgj6dv6lyw7059anilgkn"; depends=[graph gRbase Rgraphviz]; }; + dlnm = derive2 { name="dlnm"; version="2.3.6"; sha256="0yh964536zh57pcj6q2b172j57pdk4jzf78281jym81j6qxwf2fb"; depends=[mgcv nlme tsModel]; }; + dlookr = derive2 { name="dlookr"; version="0.3.2"; sha256="0cm48nzj5zbs2db39w9f2gk9wh813ib48hnfhcbp8f833xd5x72n"; depends=[classInt corrplot dbplyr DMwR dplyr ggplot2 gridExtra kableExtra knitr magrittr mice moments prettydoc purrr randomForest RcmdrMisc RColorBrewer rlang rmarkdown rpart smbinning tibble tidyr tidyselect tinytex xtable]; }; + dlsem = derive2 { name="dlsem"; version="2.4"; sha256="1q4acqlnirr5mk1k4ljzkhmx23a76w7gj98qd3c2s3qlqrsf6xvw"; depends=[graph Rgraphviz]; }; dlstats = derive2 { name="dlstats"; version="0.1.0"; sha256="0s92rdpw3m534wgjaic4srsp9i1pa3ibfmr4h7p3ly51zhza6l5h"; depends=[ggplot2 jsonlite magrittr RColorBrewer scales]; }; - dma = derive2 { name="dma"; version="1.3-1"; sha256="0azask61cmkklly32nbpw9rq03v0g976i7shhvawxj20dh4h1jz9"; depends=[MASS mnormt]; }; + dma = derive2 { name="dma"; version="1.4-0"; sha256="003snr09hazszwqnvjrbv8vyz6ihgcfcfhrlshg451dddn920615"; depends=[MASS]; }; dml = derive2 { name="dml"; version="1.1.0"; sha256="0z1dalgxh5nhrac49vh60d5awzjylc8b8mn5fk379c324milm59l"; depends=[lfda MASS]; }; - dmm = derive2 { name="dmm"; version="2.1-4"; sha256="0qwgsv128gqapnc2xi3yas51l9d1gylgs6ww0gc3d8mavlhkz4b1"; depends=[MASS Matrix nadiv pls robustbase]; }; + dmm = derive2 { name="dmm"; version="2.1-5"; sha256="1i94bsgc12ysivpy9mdmzcdfki1f84x036danki7ynrbym2b3c7a"; depends=[MASS Matrix nadiv pls robustbase]; }; dmt = derive2 { name="dmt"; version="0.8.20"; sha256="0rwc8l9k2y46hslsb3y8a1g2yjxalcvp1l3v7jix0c5kz2q7917w"; depends=[MASS Matrix mvtnorm]; }; dmutate = derive2 { name="dmutate"; version="0.1.2"; sha256="06gr49j5jz6ns1zydwsqysgkigi2sbm4hdd2jbb82f05rd9spyf3"; depends=[dplyr MASS]; }; dna = derive2 { name="dna"; version="1.1-1"; sha256="0gw70h1j67h401hdvd38d6jz71x1a6xlz6ziba6961zy6m3k5xbm"; depends=[]; }; - dnet = derive2 { name="dnet"; version="1.1.3"; sha256="1av4kbcbhpj1ivz6ln26p80z5fd170971mrcy59zm67h6kdi56az"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; + dnet = derive2 { name="dnet"; version="1.1.4"; sha256="0xccb50a85d9fcxfg0shxf430hzgjyh4qgb3js4sgzi02iagim58"; depends=[graph igraph Matrix Rgraphviz supraHex]; }; dng = derive2 { name="dng"; version="0.2.1"; sha256="0yi1fs4yvlsy3j128l7s5kwq8mhdd5fr74y2bzj7cjrxi7wgz2hg"; depends=[Rcpp]; }; - dnr = derive2 { name="dnr"; version="0.3.2"; sha256="0f5xahd86x196mg7c9zrhxj7c8cg7mrnd4nzyr02xcym6cff6vqm"; depends=[arm ergm glmnet igraph network sna]; }; - doBy = derive2 { name="doBy"; version="4.6-1"; sha256="1y02awzid23bxz8hx6j8pxd6i7jaq8pdw3k60rag8y6m69incrw5"; depends=[dplyr magrittr MASS Matrix plyr]; }; + dnr = derive2 { name="dnr"; version="0.3.4"; sha256="0hzaa308pppq2cqpb067f3y3nyv1p2xdmgy3dykf90psnn5v011p"; depends=[arm ergm glmnet igraph network sna]; }; + doBy = derive2 { name="doBy"; version="4.6-2"; sha256="02vbv9nfgywg6lsiialkmfnax5z3rkyb9nr8j9l2cp8xi6ml95mb"; depends=[dplyr magrittr MASS Matrix plyr]; }; doFuture = derive2 { name="doFuture"; version="0.6.0"; sha256="04pvs2h1ibdbl6cph30rvdn5vzj9afllvh8f0iy64pgy83vls790"; depends=[foreach future iterators]; }; doMC = derive2 { name="doMC"; version="1.3.5"; sha256="1vfrykvfvsyq12mypd266867ml1dcwc3rj5k9c3wrn5bddcm88kr"; depends=[foreach iterators]; }; doMPI = derive2 { name="doMPI"; version="0.2.2"; sha256="0ahwm17p3gq1yvc8v6sr6sb8z7i6zws8d1pf46qynl0gd4amg938"; depends=[foreach iterators Rmpi]; }; - doParallel = derive2 { name="doParallel"; version="1.0.11"; sha256="0sppgxk3d8mfsrb3cjdyn0mv0s4i7pcy8g8c3cjzbr6k8vmx5jsc"; depends=[foreach iterators]; }; + doParallel = derive2 { name="doParallel"; version="1.0.14"; sha256="01qjs4iw9f1kgymcypj0m2s4pvgqhxaycpli0fb8lq3dc0vpzfyb"; depends=[foreach iterators]; }; doRNG = derive2 { name="doRNG"; version="1.7.1"; sha256="1sb75aqkliprglfxc4x4wds6alqgzhvl2n812g1d32a88ra3slr7"; depends=[foreach iterators pkgmaker rngtools]; }; doRedis = derive2 { name="doRedis"; version="1.1.1"; sha256="10ldfzq6m83b9w24az9bf5wbfm6y9gi233s8qgsk4dnr84n3nizx"; depends=[foreach iterators rredis]; }; doSNOW = derive2 { name="doSNOW"; version="1.0.16"; sha256="13ir4a8252h4yvp5ir9xnwack1kn58i4ny6sf2qdc12zspn3850n"; depends=[foreach iterators snow]; }; dobson = derive2 { name="dobson"; version="0.3"; sha256="1vhakkg0276vq0haww5cmm8dbp20bc4874mihqasxkfylqpp6hz2"; depends=[]; }; docker = derive2 { name="docker"; version="0.0.2"; sha256="00zq4zmv2y6q069q92dn8db2bj96kfy7pv2s58q21dxkp1c4s6qg"; depends=[reticulate]; }; dockerfiler = derive2 { name="dockerfiler"; version="0.1.1"; sha256="17r8az17vkj46cljp0pa15xh9x2p5w85csm2hickfk2lyg2pbjnx"; depends=[attempt glue R6]; }; - docopt = derive2 { name="docopt"; version="0.4.5"; sha256="1pwng6018ls0hk785bs8yjwpzsqr2pcvzgpavqd9rw19n5lvzhxn"; depends=[stringr]; }; - docopulae = derive2 { name="docopulae"; version="0.3.5"; sha256="0k69ca3bjjr9q9v43ds3malwxnldizx0lr62286n0h2idqn63kfa"; depends=[]; }; + docopt = derive2 { name="docopt"; version="0.6.1"; sha256="06zknnd0c5s2y0hbddzdlr3m63ib783izpck6pgz7sjbab5pd068"; depends=[]; }; + docopulae = derive2 { name="docopulae"; version="0.4.0"; sha256="186mfiy4ygx6spnv7yrm5h0k6nf2g1xhk1l05iij39j5al5d9j21"; depends=[]; }; docstring = derive2 { name="docstring"; version="1.0.0"; sha256="19z5frhxbdc5c4vrkckgqbh9mx4d9w1icw8szsw9yadvbg48nlhl"; depends=[roxygen2]; }; docuSignr = derive2 { name="docuSignr"; version="0.0.3"; sha256="0q90z31svbdnvylfr0yj2f0gahvpi089c1d5llvwqy8qc5p9fbqw"; depends=[httr jsonlite magrittr]; }; documair = derive2 { name="documair"; version="0.6-0"; sha256="1pphcbx90n9xn8a7gvfrwzfapwqgpbl3gg2grm7chfxgcp7i99i2"; depends=[]; }; - document = derive2 { name="document"; version="3.0.1"; sha256="1pmms1mrldjqsd2zrmpyxz86xykgq1ld4l4gv9gd1ycd7r8v0f8p"; depends=[callr checkmate desc rcmdcheck roxygen2 rstudioapi withr]; }; - docxtools = derive2 { name="docxtools"; version="0.1.3"; sha256="0c8harmlil1cqg74a0n2b544gghdl71y0qrcx34yk6ky2f8bl4s3"; depends=[dplyr ggplot2 lubridate magrittr pander purrr rlang stringr tidyr]; }; - docxtractr = derive2 { name="docxtractr"; version="0.2.0"; sha256="197j57ab8x960b1yfq6xp8fwmq51xs04nf0cb16r161h4bcmgs2j"; depends=[dplyr purrr tibble xml2]; }; - dodgr = derive2 { name="dodgr"; version="0.0.3"; sha256="161qy9iyszpb44v26zn6w4d7c9bw8pg7vwgqcba0k0xc5dnr2wjc"; depends=[igraph magrittr osmdata rbenchmark Rcpp sp]; }; + document = derive2 { name="document"; version="3.0.2"; sha256="0p5brpqbgcn1v1i51cvkqq3pg6v256d70zpsc48jj5x7f2mfz3jb"; depends=[callr checkmate desc rcmdcheck roxygen2 rstudioapi withr]; }; + docxtools = derive2 { name="docxtools"; version="0.2.0"; sha256="0mz71d4hppnp7i67a202x19hcgs99lbslkkfqa2k7npzl4dxj5sr"; depends=[dplyr ggplot2 lubridate purrr rlang stringr tidyr]; }; + docxtractr = derive2 { name="docxtractr"; version="0.5.0"; sha256="079lm7dbhnwx0aj4df777ws7dmhag2n9f4w17v146rkp2z2l4ym1"; depends=[dplyr httr purrr tibble xml2]; }; + dodgr = derive2 { name="dodgr"; version="0.1.1"; sha256="187530rrz8ij1wy21zf8drppqh1yml6q01q40b60pzkf1mqp3w5m"; depends=[igraph magrittr osmdata rbenchmark Rcpp RcppParallel sp]; }; doex = derive2 { name="doex"; version="1.0.0"; sha256="1d70pb0wxc47z401ya2awjpx0rgipicxgbvkhwinx2mg0jpa8kki"; depends=[]; }; domino = derive2 { name="domino"; version="0.3.1"; sha256="0f67w0z5jy82kgm3l1rji430ayigw30vmmwp3i1nz0xibsx7jxv4"; depends=[]; }; + doremi = derive2 { name="doremi"; version="0.1.0"; sha256="0qqg0kl806gsidcigwggpx1g5p691b4300dfipiv4cfxp0pl5r1k"; depends=[data_table ggplot2 lme4 lmerTest zoo]; }; dosresmeta = derive2 { name="dosresmeta"; version="2.0.1"; sha256="0qdalzdk7q4wx3vl5f3i64m8cb7vhi4pqzghar32j0a7l6gla04z"; depends=[mvmeta]; }; dostats = derive2 { name="dostats"; version="1.3.2"; sha256="15j9sik9j5pic5wrp0w26xkrhi337xkbikw0k7sa4yfimw6f84w5"; depends=[]; }; - dotCall64 = derive2 { name="dotCall64"; version="0.9-5.2"; sha256="1jw0kyw95nivjimh25ri9sigqwlvk12kd45ydsh1yggigzc0k23k"; depends=[]; }; + dotCall64 = derive2 { name="dotCall64"; version="1.0-0"; sha256="1b8p7m3w0m7bp977c6jz74xkd611cxg11j49yza59k5fp338scb9"; depends=[]; }; dotenv = derive2 { name="dotenv"; version="1.0.2"; sha256="13i8dimrgq9nxmmrxr42pacsiylj6dilwpa8ldnrfp4cl9zgrqas"; depends=[]; }; dotwhisker = derive2 { name="dotwhisker"; version="0.5.0"; sha256="034pvkc59jdjl27wirgb2cv84ajw5y2if20njzzp87nd4f9bb6br"; depends=[broom dplyr ggplot2 ggstance gtable purrr rlang stringr]; }; doubcens = derive2 { name="doubcens"; version="1.1"; sha256="1hn65n67by3xqbcnaf5jja5pli0g6wpbbz2sfzd7i2nms7kiywhp"; depends=[]; }; + double_truncation = derive2 { name="double.truncation"; version="1.1"; sha256="03h1km4n8sasc3jdz9gal7yw170b47hgfziz35g9x3qw96lvanpg"; depends=[]; }; downloader = derive2 { name="downloader"; version="0.4"; sha256="1axggnsc27zzgr7snf41j3zd1vp3nfpmq4zj4d01axc709dyg40q"; depends=[digest]; }; - downscale = derive2 { name="downscale"; version="2.0-3"; sha256="0jvzvmwhpdr7ygcxky4yl1ldb843hrmnzhmnvl0694mmswwqsf8l"; depends=[cubature minpack_lm raster Rmpfr sp]; }; + downscale = derive2 { name="downscale"; version="3.0-1"; sha256="0kmv4d5fa6mmhmbfqfxzk1gv55j15d7madsdqi8470bwh0kkya4y"; depends=[cubature minpack_lm raster Rmpfr sp]; }; downsize = derive2 { name="downsize"; version="0.2.2"; sha256="18b9shd79z0bsdnp0apqqwv6c73j4wnfiv41ywqz761nmxbldxbn"; depends=[magrittr R_utils]; }; dpa = derive2 { name="dpa"; version="1.0-3"; sha256="0dmwi68riddi1q4b10c12wx6n7pqfmv30ix5x72zpdbgm72v343h"; depends=[igraph sem]; }; dparser = derive2 { name="dparser"; version="0.1.8"; sha256="1yx425s3iq03j043g41pyfp3cgmajb4qh50zirhd0qpplzwy8xj5"; depends=[digest]; }; - dpcR = derive2 { name="dpcR"; version="0.4"; sha256="02j7fhhfq7p2wfcnr7rdy65v6dcvdym3nfyps7717p7b429chchc"; depends=[binom chipPCR dgof e1071 evd multcomp pracma qpcR rateratio_test readxl shiny signal spatstat]; }; dpglasso = derive2 { name="dpglasso"; version="1.0"; sha256="1mx28xbm2z2bxyp33wv2v6vgn1yfsdsa0bzjjdxasgd6lvr51myf"; depends=[]; }; dplR = derive2 { name="dplR"; version="1.6.8"; sha256="0rgdshkkvij177y7d432wx23ch6f54ns3w93a6fayb1pl936rh7f"; depends=[animation digest lattice Matrix matrixStats plyr png R_utils stringi stringr XML]; }; dplRCon = derive2 { name="dplRCon"; version="1.0"; sha256="10xnawgnhxp5y949fxs1vvadc1qz2ldy0s9w9w7kf6iqh59d35sw"; depends=[]; }; - dplyr = derive2 { name="dplyr"; version="0.7.6"; sha256="0c43h13s5mr0fklikbbm89gs6z5n66rkjzdv6w3w6kl5af5wr2fl"; depends=[assertthat BH bindrcpp glue magrittr pkgconfig plogr R6 Rcpp rlang tibble tidyselect]; }; + dplyr = derive2 { name="dplyr"; version="0.7.7"; sha256="196lwck3i3m25jnn1f1nrda9svnjqqi89s0is79gbrphamddnlq5"; depends=[assertthat BH bindrcpp glue magrittr pkgconfig plogr R6 Rcpp rlang tibble tidyselect]; }; dplyr_teradata = derive2 { name="dplyr.teradata"; version="0.3.0"; sha256="1yvz1hbczqvvmgkhbvvwkjx56ljqsxry86qk9bn62rdzdvhhpwhx"; depends=[bit64 DBI dbplyr dplyr odbc rstudioapi]; }; dplyrAssist = derive2 { name="dplyrAssist"; version="0.1.0"; sha256="1lqizh70b1apyr4578917gv6s0i7p84ak96a57kvwipmh36a4ywn"; depends=[DT magrittr miniUI plyr rstudioapi shiny shinyAce shinyWidgets stringr tidyr tidyverse]; }; - dpmixsim = derive2 { name="dpmixsim"; version="0.0-8"; sha256="0paa2hmpd6bqf0m7p9j7l2h3j18lm64ya6ya8zvp55wm8pf7xgqg"; depends=[cluster oro_nifti]; }; + dpmixsim = derive2 { name="dpmixsim"; version="0.0-9"; sha256="064i122j8vkpjxzfrhp25kb6nv5j3a7s8qk0202x7vnvj9caqjvx"; depends=[cluster oro_nifti]; }; dpmr = derive2 { name="dpmr"; version="0.1.9"; sha256="1cnjywkvjb4fhbf4shjmsrq47f1fg2x21hcm1q5512bm0wg9i6jd"; depends=[digest httr jsonlite magrittr rio]; }; dprint = derive2 { name="dprint"; version="0.0.4"; sha256="13bq6yjlp5p5rcsz684rqcigp42xnz3p5phnqmrhzm874gfzm8rj"; depends=[]; }; dqrng = derive2 { name="dqrng"; version="0.0.4"; sha256="0qkpyr7gc3m704znfv011l19s8qsnq42rn8p43qsakvndfyqynbb"; depends=[BH Rcpp]; }; dr = derive2 { name="dr"; version="3.0.10"; sha256="0dmz4h7biwrn480i66f6jm3c6p4pjvfv24pw1aixvab2vcdkqlnf"; depends=[MASS]; }; - dr4pl = derive2 { name="dr4pl"; version="1.1.1"; sha256="1wh7mdns9vxjkfphj2nqllh7q3k3lch5y0b4yzf3j4xrd0wyf2hm"; depends=[ggplot2 Matrix matrixcalc Rdpack tensor]; }; + dr4pl = derive2 { name="dr4pl"; version="1.1.7.1"; sha256="17w3ls3g57zs0ibgwsh12f7l47yc4sh13b02n61wf7k5yjaql8yr"; depends=[ggplot2 Matrix matrixcalc Rdpack tensor]; }; drLumi = derive2 { name="drLumi"; version="0.1.2"; sha256="09ps8rcqrm6a1y8yif2x82l0k4jywq60pkndh9nzfpbsw4ak2lby"; depends=[chron gdata ggplot2 Hmisc irr minpack_lm msm plyr reshape rootSolve stringr]; }; dragonking = derive2 { name="dragonking"; version="0.1.0"; sha256="01b01wd1s2b8sa9f0kfbf2pbzhaqra7xxskigqh3vlj389xqm1id"; depends=[]; }; dragulaR = derive2 { name="dragulaR"; version="0.3.1"; sha256="1cw5v7m1b4pxsizsjb3zdzhydxj577p6q5fcjklsvpzmiixzlyav"; depends=[htmlwidgets shiny shinyjs]; }; - drake = derive2 { name="drake"; version="5.2.1"; sha256="004rxsxzxyc2738p92p4mk68p88pc5n0dynkffr2pmqk50n3wrq6"; depends=[bindr CodeDepends crayon digest dplyr evaluate formatR fs future future_apply igraph knitr lubridate magrittr pkgconfig purrr R_utils R6 rlang rprojroot storr stringi testthat tibble tidyselect txtq visNetwork withr]; }; + drake = derive2 { name="drake"; version="6.1.0"; sha256="102k3r5c2qdg2avz2frjb1z5i1vwpsr6mx9zcl0n7hiwixn2rxfv"; depends=[codetools digest dplyr evaluate formatR fs future igraph magrittr pkgconfig purrr R_utils R6 rlang storr stringi tibble tidyselect withr]; }; drat = derive2 { name="drat"; version="0.1.4"; sha256="0vrpqf793vinx4v7jrbn910iplvpmrlwhdjqqzx8cl2k9hl43x08"; depends=[]; }; + draw = derive2 { name="draw"; version="1.0.0"; sha256="0kbz8rcgygl4fhmljzaan5jl7wjvfljcaykm7q9lw9s6m78p06gz"; depends=[]; }; drawExpression = derive2 { name="drawExpression"; version="1.0"; sha256="0c2daicqrjlqf7s788cknzvw9c6rm500lgmwfr7z03bq7bd2ah90"; depends=[]; }; drc = derive2 { name="drc"; version="3.0-1"; sha256="0c8xn8ripzq270hy8d16fcnx02l02alddznd7fqwk3jyi6113h1y"; depends=[car gtools MASS multcomp plotrix scales]; }; - drfit = derive2 { name="drfit"; version="0.7.1"; sha256="1k2chmhdwd78a5d1pxi3iskzfb4h1fxp51ji72qs73m3i6s2mqpz"; depends=[drc MASS qcc reshape2 RODBC]; }; + drfit = derive2 { name="drfit"; version="0.7.2"; sha256="03ahzmjzrkdrv36yj6vfg3g5bwn6lb7mlxmli68sixag5h83xq7f"; depends=[DBI drc MASS odbc qcc reshape2]; }; drgee = derive2 { name="drgee"; version="1.1.6"; sha256="01404mqvkvndn5gybq8dgkfc1cy9wk94p7k7i64h47w3zbkcwsax"; depends=[data_table nleqslv Rcpp RcppArmadillo survival]; }; driftR = derive2 { name="driftR"; version="1.1.0"; sha256="0mvrmwfqg234kk5klhmw7vmf8i0g485xkx5nk73iam16fbzl9y5g"; depends=[dplyr glue janitor lubridate magrittr readr readxl rlang stringr tibble]; }; drmdel = derive2 { name="drmdel"; version="1.3.1"; sha256="1bpm9jj9dxk2daxp1yb7pn9jd750p27qa84vdfxpacm5r0mggnys"; depends=[]; }; dropR = derive2 { name="dropR"; version="0.1"; sha256="0sw5lqlfdn64dbykxdhk1pz18f83if871vkapa2nxgcfiy79b0vs"; depends=[plyr shiny]; }; - droptest = derive2 { name="droptest"; version="0.1.1"; sha256="065cf0rc2jw83nypjcq3nj37kmdwbaq9yglrvcffy9jcdm804kp9"; depends=[data_table]; }; + droptest = derive2 { name="droptest"; version="0.1.3"; sha256="1wlfhj6c4pb5mcybyd2bcn55y3azk7dv7d7il97qwbhl8kf59csl"; depends=[data_table]; }; drsmooth = derive2 { name="drsmooth"; version="1.9.0"; sha256="1wgi961bvbsnq4bygxbpy4sy5fy34lrrkaaj0r2rxcahwa1sc38n"; depends=[boot car DTK lubridate mgcv multcomp pgirmess segmented]; }; drtmle = derive2 { name="drtmle"; version="1.0.3"; sha256="1b2nlkmx7park79pkmnjnkckli89zh3klfamxkqndgd1s5p0aa11"; depends=[doFuture future future_apply future_batchtools np plyr SuperLearner]; }; drugCombo = derive2 { name="drugCombo"; version="1.0.2"; sha256="0akb0lszqr9qci9aqwrahhhza1qzdai4w15drccjm399v0csqi0w"; depends=[BIGL Deriv ggplot2 minpack_lm nlme rgl]; }; ds = derive2 { name="ds"; version="3.0"; sha256="10xp575l0wh85wg32k3as02kgqm9ax9nx9i5kd5bkimfwg4qv745"; depends=[]; }; + dsa = derive2 { name="dsa"; version="0.60.24"; sha256="0jraxggygsdhsrq98wb88vzfsr60s7i8bnhpz7wirvx2nv3813pg"; depends=[dygraphs extrafont forecast ggplot2 gridExtra htmlwidgets R2HTML reshape2 rJava timeDate tsoutliers xtable xts zoo]; }; dsample = derive2 { name="dsample"; version="0.91.2.2"; sha256="18c0zxaqwgbn9kmkwlnicwd74ljy2sxj0b9ksif13pdlj3zn57h1"; depends=[MASS]; }; dse = derive2 { name="dse"; version="2015.12-1"; sha256="1976h57zallhzq43nshg77bsykcvkfwnasha1w59c44fjpl1gs9w"; depends=[setRNG tfplot tframe]; }; - dslabs = derive2 { name="dslabs"; version="0.3.3"; sha256="1bh6n0s171n6r68fsizz2jryjlj0990bn4rbinl2ln8j17r8lgpf"; depends=[ggplot2]; }; + dslabs = derive2 { name="dslabs"; version="0.5.1"; sha256="1pzpvgwzgnr3hi9idkkx6ik80bralg5bgnz4b5p24ab5fcr45gy5"; depends=[ggplot2]; }; dslice = derive2 { name="dslice"; version="1.1.5"; sha256="0qwz9rlgpgx0k28hca2m40ab0qad9rfp1gxswygchv7rcnl4f6ml"; depends=[ggplot2 Rcpp scales]; }; dsm = derive2 { name="dsm"; version="2.2.16"; sha256="1glw3pwgar9qadjya615n5n10lg7xvclcnr3k9vn8y3fgid22f80"; depends=[ggplot2 mgcv mrds nlme numDeriv plyr statmod]; }; dsmodels = derive2 { name="dsmodels"; version="1.1.0"; sha256="0gidxi4ph49mjm2hdf9flphfb9916al4cpdkiig504n7ms2sbpbg"; depends=[latex2exp pryr shape]; }; + dsr = derive2 { name="dsr"; version="0.1.0"; sha256="0iyy0axjbxbhy9hriwgnz96ryb1qvjm1gj62rmi27386ag2knf43"; depends=[dplyr rlang]; }; dsrTest = derive2 { name="dsrTest"; version="0.2.1"; sha256="1kljlfi7jf6fa8b5f3wxjsa9rlmzcp4qix3m2qyapz2lqd85mbb7"; depends=[asht exactci loglognorm]; }; dst = derive2 { name="dst"; version="1.0.0"; sha256="0xlrczyw0i3c5hnzflrlw463x9dlmv89m7xlq9xq3krxfsx3qv4z"; depends=[]; }; dtables = derive2 { name="dtables"; version="0.2.0"; sha256="0ikgip3p4b7q97b2dshlx0fq09xsk304gfk5prw4rk95w9wck3qs"; depends=[psych]; }; @@ -5919,30 +6181,31 @@ in with self; { dtt = derive2 { name="dtt"; version="0.1-2"; sha256="0n8gj5iylfagdbaqirpykb01a9difsy4zl6qq55f0ghvazxqdvmn"; depends=[]; }; dtw = derive2 { name="dtw"; version="1.20-1"; sha256="1w301xwizncy5r8v9rwwdxfshydgp3l1pnjla1fjn6n8lx3imjj3"; depends=[proxy]; }; dtwSat = derive2 { name="dtwSat"; version="0.2.4"; sha256="1yvl64z3dp4qyii4p8phbk1g1l10q9fbickj0xzzvg2q1xmjps91"; depends=[caret dtw ggplot2 lubridate mgcv plyr proxy raster RColorBrewer reshape2 rgdal scales snow sp xtable zoo]; }; - dtwclust = derive2 { name="dtwclust"; version="5.4.1"; sha256="17q48hv2zix8jz7znb5pvwq4mrixdyh1rpzmyvj8g0sz62q0h2xc"; depends=[bigmemory clue cluster dplyr dtw flexclust foreach ggplot2 ggrepel Matrix nloptr proxy Rcpp RcppArmadillo RcppParallel reshape2 RSpectra shiny shinyjs]; }; - dub = derive2 { name="dub"; version="0.1.0"; sha256="0sdk8sppjcfx2bsngpngm2446warsnipzzw4yz5z4jpickp52ay0"; depends=[]; }; + dtwclust = derive2 { name="dtwclust"; version="5.5.1"; sha256="12wz5pzmafq3vzfr5bm6kkqfn2fg9qb7z0c5csn9r1w8ijidsyg4"; depends=[bigmemory clue cluster dplyr dtw flexclust foreach ggplot2 ggrepel Matrix nloptr proxy Rcpp RcppArmadillo RcppParallel reshape2 RSpectra shiny shinyjs]; }; + duawranglr = derive2 { name="duawranglr"; version="0.6.3"; sha256="0swvrdwnbyigsvds3s32nw79b245q3cgv7xskjx7qjcpnvzr7x7q"; depends=[digest dplyr haven readr readxl]; }; + dub = derive2 { name="dub"; version="0.2.0"; sha256="066lzyk44380mf17vx4db4a3a4rs7zl85mj5hjg172khjbqnbixw"; depends=[]; }; duckduckr = derive2 { name="duckduckr"; version="1.0.0"; sha256="1wki8xvqp5hr27iafd9jbryl9faywfkdkpn0pa0afywbic39k2cm"; depends=[crul jsonlite]; }; dummies = derive2 { name="dummies"; version="1.5.6"; sha256="01f84crqx17xd6xy55qxlvsj3knm8lhw7jl26p2rh2w3y0nvqlbm"; depends=[]; }; dummy = derive2 { name="dummy"; version="0.1.3"; sha256="081a5h33gw6ym4isy91h6mcf247c2vsdygv9ll07a3mgjcjnk79p"; depends=[]; }; dunn_test = derive2 { name="dunn.test"; version="1.3.5"; sha256="0lqwvyl3pyygfc73nf81gzw3zl3w43r7ki0yw2dgrzhkpb2iji4a"; depends=[]; }; dupiR = derive2 { name="dupiR"; version="1.2"; sha256="0p649yw7iz6hnp7rqa2gk3dqkjbqx1f6fzpf1xh9088nbf3bhhz3"; depends=[plotrix]; }; dvmisc = derive2 { name="dvmisc"; version="1.1.2"; sha256="1dy0yykskwhkql19bhzmbwsgv028afc8jh9yqwbczj6f3vpv31zh"; depends=[MASS rbenchmark Rcpp]; }; - dwapi = derive2 { name="dwapi"; version="0.1.3"; sha256="149v1yjnrdbqjg7cpnanm1jv1dcpzqy264qk5dx8wvw9kdc5h3b8"; depends=[httr jsonlite readr rjson xml2]; }; + dwapi = derive2 { name="dwapi"; version="0.1.3.1"; sha256="1sz4n8vn7cmlilxzhkm4rdfca0904cbh28n5383p9pr46bdi69q5"; depends=[httr jsonlite readr rjson xml2]; }; dyads = derive2 { name="dyads"; version="1.1"; sha256="0jlyg4bz3zp4g5ig0swwi72bxaj85wll05h6vishnvmnprpdc96n"; depends=[MASS mvnfast]; }; - dygraphs = derive2 { name="dygraphs"; version="1.1.1.5"; sha256="0bfpna7gijnfvf40fm4dhb63lf2x6n91d0ym3w936s6xiyc3ah17"; depends=[htmltools htmlwidgets magrittr xts zoo]; }; + dygraphs = derive2 { name="dygraphs"; version="1.1.1.6"; sha256="022j007mzfa9k2n31yg4aizcsf571vv3jip092h23rqj03rk3ly3"; depends=[htmltools htmlwidgets magrittr xts zoo]; }; dyn = derive2 { name="dyn"; version="0.2-9.6"; sha256="16fqv9k7yxdgybwzafjkyqm16qpgqz13lcjpi6a1nc8xbzlzh0gb"; depends=[zoo]; }; dynBiplotGUI = derive2 { name="dynBiplotGUI"; version="1.1.5"; sha256="0fvyn33mzjcc3sis05phc6412y25m406il2wzdfw8caa8dafj0yw"; depends=[tcltk2 tkrplot]; }; dynCorr = derive2 { name="dynCorr"; version="1.1.0"; sha256="0l5k764j1zhsqpgp0ndihah63hsk3zv9hviixfmh4h3i0sr0q52p"; depends=[lpridge]; }; dynOmics = derive2 { name="dynOmics"; version="1.2"; sha256="0fsck5wx4rcfckjr6xg0s3a6cvh4881cqzy0af91icqg0p3zjj2l"; depends=[ggplot2 gplots]; }; - dynRB = derive2 { name="dynRB"; version="0.11"; sha256="0xki395r1biasbpg0dp0daql44zszs2d3sb7q08ypcp529c9v40y"; depends=[caTools corrplot ggplot2 RColorBrewer reshape2 vegan]; }; + dynRB = derive2 { name="dynRB"; version="0.13"; sha256="04axc6hzwaclgdyl5lplihgbg6ip8irpiyanghfhhid3c4jm03r7"; depends=[corrplot ggplot2 RColorBrewer reshape2 vegan]; }; dynaTree = derive2 { name="dynaTree"; version="1.2-10"; sha256="1ng672mlv98xnsbd4xq70hxc8j158la4n63y46rw74granaz29ya"; depends=[]; }; dynamac = derive2 { name="dynamac"; version="0.1.4"; sha256="1gsqgwqamfa8zvl01zsjmbsn7q73m4aii6gzb5khppw244qjgw8y"; depends=[lmtest MASS]; }; dynamicGraph = derive2 { name="dynamicGraph"; version="0.2.2.6"; sha256="1xnsp8mr3is4yyn0pyrvqhl893gdx2y1zv8d2d55aah2xbfk0fjj"; depends=[ggm]; }; dynamicTreeCut = derive2 { name="dynamicTreeCut"; version="1.63-1"; sha256="1fadbql7g5r2vvlkr89nlrjxwp4yx4xrdqmv077qvmnx9vv0f4w3"; depends=[]; }; - dynamichazard = derive2 { name="dynamichazard"; version="0.5.3"; sha256="1ggz3i4l5p23gkk0mvfgkiv9q8gmnamjyss8kz5i870ymwnxya09"; depends=[boot Rcpp RcppArmadillo survival]; }; + dynamichazard = derive2 { name="dynamichazard"; version="0.6.1"; sha256="0xwvfpw0djnzi4igim8g32s233f5xf53pskg5w4xwnqja7x6w8v2"; depends=[boot Rcpp RcppArmadillo survival]; }; dynamo = derive2 { name="dynamo"; version="1.0"; sha256="0arsv686ix7xpca57ayqgifim1q35dl4w2mx7fw8bc0lidapilyp"; depends=[abind glamlasso MortalitySmooth Rcpp RcppArmadillo]; }; dynatopmodel = derive2 { name="dynatopmodel"; version="1.2.1"; sha256="0lpfhj69bvagqzzg2kjqvn9xx8f93ii34flrrns20z3bxla6gds9"; depends=[deSolve lubridate maptools raster rgdal rgeos sp topmodel xts zoo]; }; - dyncomp = derive2 { name="dyncomp"; version="0.0.1-5"; sha256="1626z5523s4igw55fw97lplfgg9mzf4np8imrarkligslvc5q8ip"; depends=[zoo]; }; + dyncomp = derive2 { name="dyncomp"; version="0.0.2-1"; sha256="13wp2k8nbgrbrqng2dmgy0ixgidk51wq9y7mv5pdbvdajxdsyh11"; depends=[zoo]; }; dynetNLAResistance = derive2 { name="dynetNLAResistance"; version="0.1.0"; sha256="018y3m648ni31rlisjfnrx1d10mm48wpxanlnnxxpnqxjcywg2x8"; depends=[doParallel foreach igraph]; }; dynfrail = derive2 { name="dynfrail"; version="0.5.2"; sha256="1q7ml24j0ycy2bwpa14vl96315ni7x9rfp0qmf36w00mylgc3ry6"; depends=[dplyr magrittr Rcpp RcppArmadillo survival tibble tidyr]; }; dynia = derive2 { name="dynia"; version="0.2"; sha256="1swip4kqjln3wsa9xl0g92zklqafarva923nw7s44g4pjdy73d5l"; depends=[]; }; @@ -5950,29 +6213,29 @@ in with self; { dynpanel = derive2 { name="dynpanel"; version="0.1.0"; sha256="073kfl5g4d7v8wd2qnpixqrxbac3cqj35z03ax2zlb8h2afa7j62"; depends=[gtools]; }; dynpred = derive2 { name="dynpred"; version="0.1.2"; sha256="111ykasaiznn3431msj4flfhmjvzq7dd1mnzn1wklc5ndix1pvf9"; depends=[survival]; }; dynprog = derive2 { name="dynprog"; version="0.1.0"; sha256="1rvn2zyhdi60y01zbvfv4him6iz2ljdr7ivkr7m7y7yd1lg547ax"; depends=[rlang]; }; - dynr = derive2 { name="dynr"; version="0.1.12-5"; sha256="1l9waqwg5mkqy8ipryickrkf141mjpzdvsc4qbw8bq4rkrgykklc"; depends=[ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 xtable]; }; + dynr = derive2 { name="dynr"; version="0.1.13-4"; sha256="11qs6zj73y8x1pvlnq09f1sapdg9b933a45il0p8w23zj1232205"; depends=[ggplot2 latex2exp magrittr MASS Matrix mice numDeriv plyr Rdpack reshape2 xtable]; }; dynsbm = derive2 { name="dynsbm"; version="0.5"; sha256="01vi4qzgp25l4wg2ij9pqrn775x4yj9gck0l397nwjg96pa7x2lz"; depends=[RColorBrewer Rcpp riverplot]; }; dynsim = derive2 { name="dynsim"; version="1.2.1"; sha256="0nkxn9v4f353fhcn1vsdrh29mrms10zid63b84flg3c6hvc0x4qr"; depends=[ggplot2 gridExtra MASS]; }; dynsurv = derive2 { name="dynsurv"; version="0.3-6"; sha256="12bfv6bykgsyxryydhjs89yvk7akam5gy89mzn1hv4ilrpc5mlmw"; depends=[BH ggplot2 nleqslv plyr reshape survival]; }; - dynutils = derive2 { name="dynutils"; version="0.1.0"; sha256="0fr9gnsafi02ydmp84kv8lq6q4mcf4sg1izgd4h1s1ljvgwq3yqp"; depends=[crayon desc devtools dplyr glue magrittr processx purrr Rcpp stringr testthat tibble tidyr]; }; - e1071 = derive2 { name="e1071"; version="1.6-8"; sha256="08n6i26nfckjpxjkzi8phhanc3ahsrirkv5rz38y2jcv7ds031pn"; depends=[class]; }; + dynutils = derive2 { name="dynutils"; version="1.0.0"; sha256="182k67zkn1gq91h405f0csw71qs5apf92ddrbh8274nmar8hnha4"; depends=[crayon desc devtools dplyr glue magrittr processx purrr Rcpp stringr testthat tibble tidyr]; }; + e1071 = derive2 { name="e1071"; version="1.7-0"; sha256="0fk4pw67cw1663d0n9rf1qfdqzz8k5nqkjgp3hi5jr422qp9lsck"; depends=[class]; }; eAnalytics = derive2 { name="eAnalytics"; version="0.1.3"; sha256="1lrkmfs2sq9p2n7g528jf6wxixqk08w468nckkij2mprhrccjjj6"; depends=[dplyr DT energyr googleVis leaflet plotly shiny shinydashboard]; }; eChem = derive2 { name="eChem"; version="1.0.0"; sha256="0wmf204hqd4s5har5l9bkcbrbmbqbb8m11w2aivi2gs98f3hy51p"; depends=[animation plot3D]; }; - eDMA = derive2 { name="eDMA"; version="1.5-1"; sha256="0yhywv6bfb1pb6rxkw484kf2knnqar407v5khhs023kdjb01iy8q"; depends=[Rcpp RcppArmadillo xts zoo]; }; + eDMA = derive2 { name="eDMA"; version="1.5-3"; sha256="0wyp81si6lcispqng4c7lii22qbyblvijgnlxvcsnkcxj5hpm76j"; depends=[Rcpp RcppArmadillo xts zoo]; }; eHOF = derive2 { name="eHOF"; version="1.8"; sha256="0g0sb98mlgvhs27s0a1x0ysj3r4p3r7i382fqzfv29kn1ayw0r5c"; depends=[lattice mgcv]; }; - eLNNpaired = derive2 { name="eLNNpaired"; version="0.2.3"; sha256="08nck2p5npyw264kgcqmgx5rx7c3h9v892f90xlcd1dnb7dqlan3"; depends=[Biobase globaltest GSEAlm iCheck samr]; }; eMLEloglin = derive2 { name="eMLEloglin"; version="1.0.1"; sha256="087zw48lykls2jcsmpqd5jkrlpr0j423snp00liszjhdpdh59saq"; depends=[lpSolveAPI]; }; eNetXplorer = derive2 { name="eNetXplorer"; version="1.0.1"; sha256="196m8cbd95pc8w03n0nxc625mxwpqpcw3lc3cbrvpzaljmfhqn2v"; depends=[calibrate glmnet gplots Matrix progress RColorBrewer]; }; ePCR = derive2 { name="ePCR"; version="0.9.9-6"; sha256="1q46njiqasrma9vr8p7m9ndwag53aavbg4l7a4shgys3w862m7kc"; depends=[Bolstad2 c060 glmnet hamlet impute MASS Matrix pracma ROCR survival timeROC]; }; - eRm = derive2 { name="eRm"; version="0.16-1"; sha256="1wyzqhka7k4a4xclicc098zgi0y2fbx4fray144qx1pyaa8p8075"; depends=[lattice MASS Matrix]; }; + eRm = derive2 { name="eRm"; version="0.16-2"; sha256="0cfd8j8d1x33g77vyc29xd2qjwq7bsqh8c8kvcr02vi1rq3kkvkv"; depends=[lattice MASS Matrix]; }; eaf = derive2 { name="eaf"; version="1.8"; sha256="1plzvfa2vs3njky7xk9dvic2xapdnzb5iycrksv0qj03ylbh6410"; depends=[modeltools]; }; earlyR = derive2 { name="earlyR"; version="0.0.1"; sha256="14davqhh3n5dfsddnfd79ni56bssrpwhvkqkdb77a8x9fn8w32pv"; depends=[distcrete EpiEstim epitrix]; }; + earlygating = derive2 { name="earlygating"; version="1.0"; sha256="0y6xjkh9p8bvanc9p5sycah8v81k85xr8i7vyvjb9g4a64srwhd7"; depends=[betareg doParallel foreach]; }; earlywarnings = derive2 { name="earlywarnings"; version="1.0.59"; sha256="06j5g5lrzl4p5pb1pp79h00iqpbwralzhpzxmaiymv7j8kz87nr0"; depends=[fields ggplot2 Kendall KernSmooth lmtest moments nortest quadprog som spam tgp tseries]; }; earth = derive2 { name="earth"; version="4.6.3"; sha256="0af02qi3np40p90v0npnwqa5dg2zszky6kjx9zjw7id7jw5kx1m6"; depends=[plotmo TeachingDemos]; }; earthtones = derive2 { name="earthtones"; version="0.1.0"; sha256="1phl50bgd40i36fdkfs9xkqm703vgwxlnpyik6lk8ssip0m4rn9j"; depends=[ggmap]; }; easyAHP = derive2 { name="easyAHP"; version="0.1.1"; sha256="161mn90j9ph1p9277mj61hch8ndcv7k9izs32q93y5wp474gzynd"; depends=[]; }; - easyCODA = derive2 { name="easyCODA"; version="0.23"; sha256="0mik051b34p66a2ipwi512926wl5r1zdqhdam68cr13sar2c0cbq"; depends=[ca]; }; - easyDes = derive2 { name="easyDes"; version="3.0"; sha256="1z4ynd1ck2vxsshygjgnhyzg8i41kpnwsfix96nmgwm3861n0phb"; depends=[multcomp PMCMR]; }; + easyCODA = derive2 { name="easyCODA"; version="0.25"; sha256="079vj7gxbpqcx7jjk6vfv13ng23jglsq1x88i71qvqlqp9vkvs87"; depends=[ca vegan]; }; + easyDes = derive2 { name="easyDes"; version="4.0"; sha256="1lfkkkwlj444md7xp2zzx0ai976yxq6xp3v2a42pwgzs1fcafwal"; depends=[multcomp PMCMRplus]; }; easyNCDF = derive2 { name="easyNCDF"; version="0.0.4"; sha256="1hd7b6pdm5j41a4v0jxhbqdy2bz5gj86fsfwj0l7gg7h32d6hkhq"; depends=[abind ncdf4]; }; easyPubMed = derive2 { name="easyPubMed"; version="2.5"; sha256="08b94pcya9bmnsipd1jn95dpadw2aqb0fnvm68n11mwg40hd272j"; depends=[XML]; }; easySVG = derive2 { name="easySVG"; version="0.1.0"; sha256="03gl5gl0yqgpygd4kna79wrhflbnq3zrz3iq2i8hk9xqd83mszh3"; depends=[]; }; @@ -5984,30 +6247,31 @@ in with self; { easynls = derive2 { name="easynls"; version="5.0"; sha256="1ma2q4y5dxk6q99v880vqfsgy1fha96j7pi8ch699l0pi6bx0d6c"; depends=[]; }; easypackages = derive2 { name="easypackages"; version="0.1.0"; sha256="00paxdwz4bw3imqhcsw6hj1h0gmnpishlxcj79n826vhdy23jc4y"; depends=[assertthat devtools]; }; easypower = derive2 { name="easypower"; version="1.0.1"; sha256="1vf0zv55yf96wjxja6ifdjvgc9nw0jl0hnc1ygyjd8pmwbgdz9bl"; depends=[pwr]; }; - easyreg = derive2 { name="easyreg"; version="1.0"; sha256="01wpqr2vfa245xln1zmqr1a9bibj0cnx60bw24l1q1li7r13wjyy"; depends=[car nlme]; }; + easyreg = derive2 { name="easyreg"; version="2.0"; sha256="0qxcrgcc306g4i2wnph94wa7sj06mqxi96cvbpnk9mi46ps0l1kw"; depends=[car nlme]; }; ebGenotyping = derive2 { name="ebGenotyping"; version="2.0.1"; sha256="1jllzc7kvvckrws8qhgvwy626llyb68sp1davp7swx48sf7rwcxc"; depends=[]; }; ebSNP = derive2 { name="ebSNP"; version="1.0"; sha256="0x3ijwg4yycsfy6jch1zvakzfvdgpiq8i7sqdp5assb8z1823w0b"; depends=[]; }; - eba = derive2 { name="eba"; version="1.7-2"; sha256="00hlmnknif9yr4wzw0n1fzkrgbciv7ljc0gkfq34v3vvy3dmdsvq"; depends=[nlme]; }; + eba = derive2 { name="eba"; version="1.8-0"; sha256="0241l0vf1791vxkahxlf9d2bd1073hyl0nfmccafzaa0k76z369w"; depends=[nlme]; }; ebal = derive2 { name="ebal"; version="0.1-6"; sha256="1cpinmbrgxxv0fzi9qi2inv4hw2lz7iq4b0ggp316rdqqb5bj9r0"; depends=[]; }; ebdbNet = derive2 { name="ebdbNet"; version="1.2.5"; sha256="0kal4sqx12y04696ilwnwkmss4rn16dkbnalgqimz6i4jhz8n23h"; depends=[igraph]; }; - ebimetagenomics = derive2 { name="ebimetagenomics"; version="0.3"; sha256="1nvdpgq88yf7a89qy896wc1h7afjwj90jdbpm144fn12b2pba0a7"; depends=[breakaway sads vegan]; }; + ebimetagenomics = derive2 { name="ebimetagenomics"; version="0.6"; sha256="0jaz7l71pnf3i2q83mx0pjqli9sn30a4b9vshcmp70v3h6xdj9wx"; depends=[breakaway sads vegan]; }; ebmc = derive2 { name="ebmc"; version="1.0.0"; sha256="0v9hkzy8ljddmi6wdjd1jga4ib566ikr1vgrvxba67ka524r6bbp"; depends=[C50 DMwR e1071 pROC randomForest rpart]; }; ecb = derive2 { name="ecb"; version="0.2"; sha256="17hj4d48j6rran64ajzlgkgz17mab51fa3lz8rm3mw0qhahkjlmc"; depends=[curl httr rsdmx xml2]; }; ecd = derive2 { name="ecd"; version="0.9.1"; sha256="0d8mf5q6n7k5qj6kxvrb3habl0qmn2rxv814kydkrz2bg0scvm1q"; depends=[digest ggplot2 gridExtra gsl moments optimx polynom RcppFaddeeva Rmpfr RSQLite stabledist xtable xts yaml zoo]; }; ecdfHT = derive2 { name="ecdfHT"; version="0.1.1"; sha256="1n3n9n86pj8c54l3xvp7knvi0ajbnjmz9pi79p7wfq92a90fqx48"; depends=[rgl]; }; ecespa = derive2 { name="ecespa"; version="1.1-10"; sha256="1n6wvz463w0ainn9a52arjhs5q9pwciknb5328pr6y287fwa3nnn"; depends=[spatstat]; }; - echo_find = derive2 { name="echo.find"; version="1.1.1"; sha256="074qk22dsz29w88ydrwshjzzhrh86wyyjiiwiahq4ns5m64szw7n"; depends=[minpack_lm]; }; + echarts4r = derive2 { name="echarts4r"; version="0.1.1"; sha256="0vknh2s5ifk3nk66v7klgwkmlhk0aji7vrl18vad0x0jgkzayyvv"; depends=[base64enc broom countrycode crosstalk d3r data_tree dplyr htmlwidgets magrittr purrr]; }; + echo_find = derive2 { name="echo.find"; version="1.3.1"; sha256="1z21pcl8kfxrikcghkgwa7flqv3jh3sgdaips64m26i9r9lp5kc5"; depends=[minpack_lm]; }; echogram = derive2 { name="echogram"; version="0.1.1"; sha256="0f93s9f1ghin8129vb3bvsp7jmy2hfrx97p86hci8b2y4f7b83qh"; depends=[geosphere readHAC]; }; - echor = derive2 { name="echor"; version="0.1.0"; sha256="0242yk02qkcfrivxc3zgaw3awmj4b6ra38h1gg21795yrpzcyv02"; depends=[dplyr httr jsonlite lubridate purrr sf tibble tidyr]; }; + echor = derive2 { name="echor"; version="0.1.1"; sha256="1mc0qng9nqkvbpyklhf0a0fpgww8x88cgb29gmf1v7zycs1ch1m9"; depends=[dplyr geojsonsf httr lubridate plyr purrr readr tibble tidyr]; }; ecipex = derive2 { name="ecipex"; version="1.0"; sha256="0pzmrpnis52hvy80p3k60mg9xldq6fx8g9n3nnqi3z56wxmqpdv7"; depends=[CHNOSZ]; }; eclust = derive2 { name="eclust"; version="0.1.0"; sha256="01x327w02m357lngmgv3drni2s67sass25xk9vni1z434n8i4428"; depends=[caret data_table dynamicTreeCut magrittr pacman pander stringr WGCNA]; }; - ecm = derive2 { name="ecm"; version="4.0.0"; sha256="09678l6sh61f51jfpmkk4bkxind8jdn6izw6bizshr1bvk8lapjc"; depends=[car]; }; + ecm = derive2 { name="ecm"; version="4.3.0"; sha256="0nck8hfiqpkq8wm2jrzxi12aq9pnq58wgaizygdqf2m40bjz47gv"; depends=[car]; }; eco = derive2 { name="eco"; version="4.0-1"; sha256="08fblbr9qp2v0cp69hy68c18xjqvx0nsnx42n2vd1gc6r7apapj6"; depends=[MASS]; }; ecodist = derive2 { name="ecodist"; version="2.0.1"; sha256="04piv52b4b9rgv1gy6s3b1lzapc0rqiwp1yi7f8yzgjd9329kc5g"; depends=[]; }; ecoengine = derive2 { name="ecoengine"; version="1.11.0"; sha256="1d5x6hvqrqjj0wg07m4dbgb9ljdq73ibavzy2q5magnfn50a7rzm"; depends=[assertthat data_table dplyr httr jsonlite lubridate magrittr plyr whisker]; }; ecolMod = derive2 { name="ecolMod"; version="1.2.6"; sha256="1n30faldfhpm2jkaw793vr220kgn3bmn8hxhw32rax294krmwn4v"; depends=[deSolve diagram rootSolve shape]; }; ecolottery = derive2 { name="ecolottery"; version="1.0.0"; sha256="0w5aq1aaqzz74vlj8hgnmn60l8rdrchx022dpspqnpvpzdlh65z5"; depends=[abc ggplot2]; }; - econet = derive2 { name="econet"; version="0.1.6"; sha256="1izb7ssb5a5r5qky3jzyp2j5p1qlhq7vhl8nhz2xhkiks8xgf4xg"; depends=[bbmle dplyr igraph intergraph MASS Matrix minpack_lm plyr sna spatstat_utils tnet]; }; + econet = derive2 { name="econet"; version="0.1.7"; sha256="0pvr9bv4ix5xvr0hg61j1iizdi2n5vs8widl91cj1ci90g52dvrk"; depends=[bbmle dplyr igraph intergraph MASS Matrix minpack_lm plyr sna spatstat_utils tnet]; }; econullnetr = derive2 { name="econullnetr"; version="0.1.0"; sha256="0l4qy7x8f8sjc3s1bhz3kadfqifw0x9jl7dvcjwkh9q14h093cz5"; depends=[bipartite gtools reshape2]; }; ecoreg = derive2 { name="ecoreg"; version="0.2.2"; sha256="1yzyqvhshgc7ip251y7hsvip4xwf8i92bvvz84mn0mzv5b4mq3im"; depends=[]; }; ecoseries = derive2 { name="ecoseries"; version="0.1.5"; sha256="1q35hp5hl6z28hns5rnp3mjn6hqp5qh714pagw7fw4d4a6wnvacy"; depends=[magrittr RCurl readr rjson rvest tibble xml2 zoo]; }; @@ -6016,9 +6280,10 @@ in with self; { ecospat = derive2 { name="ecospat"; version="3.0"; sha256="1c9cbxs022f2bjnvgdfxhmqkzr30svna596r1fn5i7zsqd7dm0w6"; depends=[ade4 adehabitatHR adehabitatMA ape biomod2 classInt dismo doParallel ecodist foreach gbm gtools iterators maptools MigClim poibin PresenceAbsence randomForest raster rms snowfall sp spatstat vegan]; }; ecotox = derive2 { name="ecotox"; version="1.3.2"; sha256="12nng1v73lshcy99hqrp5a1qy052z0cz5n97bq7fla7zc4is69y5"; depends=[ggplot2 magrittr]; }; ecotoxicology = derive2 { name="ecotoxicology"; version="1.0.1"; sha256="084xkr59d7x9zxmsnsyym2x8jshz6ag6rvnmhd1i6fzar8ypwccb"; depends=[]; }; - ecoval = derive2 { name="ecoval"; version="1.2"; sha256="098n31py05f0ram733jdc85ki3fcpjc40yn7wsi7g74jyhdb1qms"; depends=[jpeg rivernet utility]; }; + ecoval = derive2 { name="ecoval"; version="1.2.1"; sha256="0dm2vqk5hgs4dh9ms10srjjblk09sidn7m06r714h1vswcd7bphs"; depends=[jpeg rivernet utility]; }; ecp = derive2 { name="ecp"; version="3.1.0"; sha256="0siq5acpy4wmqzm6zvpqj1m8a05hgk5jhb1clv06y40kqk5kjrap"; depends=[Rcpp]; }; ecr = derive2 { name="ecr"; version="2.1.0"; sha256="0vvkdxlcqaim9mkgwgdxrx1xhw3lshi1nxfw3kqllq14p3l6xss4"; depends=[BBmisc checkmate ggplot2 parallelMap ParamHelpers reshape2 smoof]; }; + ectotemp = derive2 { name="ectotemp"; version="0.1.1"; sha256="1gnlbd7h1jf5mryi9mdpbj521vbsj00jd4bc26rqj70wm54nn3p9"; depends=[dplyr psych]; }; eda4treeR = derive2 { name="eda4treeR"; version="0.2.0"; sha256="0fh6nfgvbkvjm1f0b292ggi0mr8ylq5pg2wp8cph46j8rhbgbdxz"; depends=[dae dplyr emmeans ggplot2 lme4 magrittr pbkrtest tidyverse]; }; edarf = derive2 { name="edarf"; version="1.1.1"; sha256="0f27hs7vn4v2jis3d66s48hr0ki8m8ndspcw1cwns5vjwb77iqwm"; depends=[data_table ggplot2 mmpf]; }; edcc = derive2 { name="edcc"; version="1.0-0"; sha256="036fi6mnn9480hkb378xb5jilkfvdydjmkyw4mcc9s1lz195f62w"; depends=[spc]; }; @@ -6046,11 +6311,11 @@ in with self; { eegkitdata = derive2 { name="eegkitdata"; version="1.0"; sha256="1krsadhamv1m8im8sa1yfl7injvrc4vv3p88ps1mpn8hibk5g51m"; depends=[]; }; eel = derive2 { name="eel"; version="1.1"; sha256="0cv6dhw57yy140g73z94g9x1s42fpyfliv9cm2z1alm7xwap1l0x"; depends=[emplik rootSolve]; }; eemR = derive2 { name="eemR"; version="0.1.5"; sha256="13c5k2si8aq2461iz9413hlqzgkb25zrdfvizzk8s2nn60npyaw9"; depends=[dplyr pracma R_matlab readr rlist stringr viridis]; }; - eeptools = derive2 { name="eeptools"; version="1.2.0"; sha256="14cmvshalfvh1zd1gp2dsp42kjxw2pdfixwlk9zvlw7ncx9y83j3"; depends=[arm data_table ggplot2 maptools vcd]; }; + eeptools = derive2 { name="eeptools"; version="1.2.1"; sha256="0idrwh6khz1sbslx35kmm6f79njam0xl48r3aiy70p2l569rj89h"; depends=[arm data_table ggplot2 maptools vcd]; }; eesim = derive2 { name="eesim"; version="0.1.0"; sha256="0ljj1jp9cl0im8k7sfjd28ggj4q9a14df3554kwxkssr1vsn1wbc"; depends=[dplyr lubridate purrr viridis]; }; effectFusion = derive2 { name="effectFusion"; version="1.0"; sha256="1nx61n4lgnj6wh4arqm62p9xwxqvz4g7bs4b5k3ybkhmh6ns9v5l"; depends=[bayesm cluster ggplot2 MASS Matrix]; }; - effectR = derive2 { name="effectR"; version="1.0.1"; sha256="11kqp0si5jm3ffw7d1kq5b6qwdzwijdp1n2hv8a3fa5vppkp43ws"; depends=[ggplot2 reshape2 seqinr shiny viridis]; }; - effects = derive2 { name="effects"; version="4.0-2"; sha256="10anvrn5v04i985d06fxv099970vvjllms7iwpbpa488zv5k9b81"; depends=[carData colorspace estimability lattice lme4 nnet survey]; }; + effectR = derive2 { name="effectR"; version="1.0.2"; sha256="1icr1sx98x3h8rbky1agdh809arhjqcypyajl7y50yis8a5pkycb"; depends=[ggplot2 reshape2 rmarkdown seqinr shiny viridis]; }; + effects = derive2 { name="effects"; version="4.0-3"; sha256="1riwc3z7h1h08nfkiv2fymllnbqqsdgaq7asla77ygm5hiqd435y"; depends=[carData colorspace estimability lattice lme4 nnet survey]; }; effectsizescr = derive2 { name="effectsizescr"; version="0.1.0"; sha256="0shfjk6r3bz04jakrn5nwgymjx60lk83i0akcx7zqfxp3k8yncs5"; depends=[Kendall]; }; efflog = derive2 { name="efflog"; version="1.0"; sha256="1sfmq7xrr6psa6hwi05m44prjcpixnrl7la03k33n0bksj8r1w6b"; depends=[]; }; effsize = derive2 { name="effsize"; version="0.7.1"; sha256="0l0ja7qcknn8r5hf7nrjk5cy0ajw0z60ggbyj8qvjzf8qah4mlss"; depends=[]; }; @@ -6059,58 +6324,65 @@ in with self; { ega = derive2 { name="ega"; version="2.0.0"; sha256="04kwh24aap22yclmcrix3vi553qb30hd43mgfzpdl0cw3ibrh7xg"; depends=[ggplot2 mgcv]; }; egcm = derive2 { name="egcm"; version="1.0.12"; sha256="0nssf5six1j7z6fss7478zdbsfx60myzw833m7nsnaf1r8n4ixaf"; depends=[ggplot2 MASS pracma quantmod tseries urca xts zoo]; }; egg = derive2 { name="egg"; version="0.4.0"; sha256="11zi42wvjd5x68xrxsqwzwdr9mb3iw9pm02mgy3z6m21mgyvgnmn"; depends=[ggplot2 gridExtra gtable]; }; - eggCounts = derive2 { name="eggCounts"; version="2.0"; sha256="0qlx1wm50zh5mp3bn6lkkq43d19ji2fwa4x0z5f98qhmhxa74lck"; depends=[BH boot coda lattice numbers Rcpp RcppEigen rootSolve rstan StanHeaders testthat]; }; - egoTERGM = derive2 { name="egoTERGM"; version="1.0.0"; sha256="10q52552srz2s9v3r3k4y8v8jfcb1arirw3mr1p9a5nbixdcnp8z"; depends=[boot btergm ergm GGally Matrix network sna speedglm statnet xergm_common]; }; + eggCounts = derive2 { name="eggCounts"; version="2.1-1"; sha256="121hmqav8x0d6aqzbz96dv0rdc6mv070v5rvaz13rj17ix5y92yi"; depends=[BH boot coda lattice numbers Rcpp RcppEigen rootSolve rstan StanHeaders testthat]; }; + egoTERGM = derive2 { name="egoTERGM"; version="2.0.1"; sha256="06yq951cgb1qkily13a3n3kjzpydcbzr8kdsg4mbp1z66nk40izd"; depends=[boot btergm ergm GGally Matrix network sna speedglm xergm_common]; }; egonet = derive2 { name="egonet"; version="1.2"; sha256="1f0fbqyk2ilmhirxvf1iwgfappi5r7807ag77r89lbaf5jq8akl0"; depends=[sna]; }; - egor = derive2 { name="egor"; version="0.18.06-02"; sha256="1q0kvgz04d80drvgli1pmra6dcn77swk8z19sj3lkqx3qmgjqn7m"; depends=[dplyr igraph network plyr purrr shiny survey tibble tidyr]; }; - eha = derive2 { name="eha"; version="2.5.1"; sha256="0www19cc80xg2hi1ibajqnp931gda9pk95cnx976lq1kpxzb2pyl"; depends=[survival]; }; + egor = derive2 { name="egor"; version="0.18.08-02"; sha256="14jhj1lj5bdsf64zq9gia63h0p3i9211dnla9g7r0dmlbbygwqgf"; depends=[dplyr igraph network plyr purrr shiny survey tibble tidyr]; }; + eha = derive2 { name="eha"; version="2.6.0"; sha256="0nw72jcwcx2rzlzsrmdvg7pymyzf5icynidlr1m9b70v6rnqr84b"; depends=[survival]; }; ei = derive2 { name="ei"; version="1.3-3"; sha256="0i8pvpal23zwsqldhmm3iis4vw9s08mlydpshaig2dsd9549gn11"; depends=[cubature eiPack ellipse foreach MASS mnormt msm mvtnorm plotrix sp tmvtnorm ucminf]; }; eiCompare = derive2 { name="eiCompare"; version="2.1"; sha256="0kv4k1zk1gz3fapy2i2ydy0n38hy95i10r3hr3dx8mkkf3nsj46h"; depends=[cubature data_table ei eiPack ellipse foreach ggplot2 magrittr mnormt msm mvtnorm plotrix plyr R_utils stringr tidyr tmvtnorm ucminf]; }; eiPack = derive2 { name="eiPack"; version="0.1-7"; sha256="1cxk31bj012ijm85sf6l4rjrwayw94j2d6aav8p9g1f0raha2s6y"; depends=[coda MASS msm]; }; eigeninv = derive2 { name="eigeninv"; version="2011.8-1"; sha256="18dh29js824d7mrvmq3a33gl05fyldzvgi8mmmr477573iy9r30g"; depends=[]; }; eigenmodel = derive2 { name="eigenmodel"; version="1.10"; sha256="1x613ipqpsq5yj4bb68g7yfwavd75n02xajr2cpbzsa2vyipvpsa"; depends=[]; }; eigenprcomp = derive2 { name="eigenprcomp"; version="1.0"; sha256="156qyv7sl8nng55n3ay6dnpayyfrqv27ndz40xf4w92is9zmymy0"; depends=[]; }; + eikosograms = derive2 { name="eikosograms"; version="0.1.1"; sha256="13s5wqcc8iwnhn3msrh9dfrvq9bwlby93p9v5wcnrm8m9iskax1s"; depends=[plyr]; }; eive = derive2 { name="eive"; version="2.3"; sha256="073hwx944db7zxq6yib6yvciaic11k49zl1iqphippcd5ygkad80"; depends=[Rcpp]; }; + eivtools = derive2 { name="eivtools"; version="0.1-8"; sha256="0ynmrql6dv10m7cwba5mzwlbvp6ab53nzqqvk3ihwyiqzmnnmpk4"; depends=[R2jags]; }; eiwild = derive2 { name="eiwild"; version="0.6.7"; sha256="1fp4kvlmcjjnzn2a5cmlzaf6y5q6cdbbi2nmvjyqc4y1bmwh3srf"; depends=[coda gtools lattice]; }; - eixport = derive2 { name="eixport"; version="0.3.0"; sha256="1ykv5jqri4zkshawck3lfl6jrzw24k27gwhi02rckzbrg2nb3909"; depends=[ncdf4 raster sf sp]; }; + eixport = derive2 { name="eixport"; version="0.3.6"; sha256="0wzp7jxs80drp428m6kgx419vzrmiw6spgv9ldrakbfkjjnrzsa6"; depends=[cptcity ncdf4 raster sf sp]; }; elasso = derive2 { name="elasso"; version="1.1"; sha256="0nz3vw803dvk4s45zc9swyrkjwna94z84dn4vfj3j17h74a0cij2"; depends=[glmnet SiZer]; }; elastic = derive2 { name="elastic"; version="0.8.4"; sha256="0s0nz8j4f1qxjlgzllnfsirbpcggmb5f41zwdrb9xgwpnpn68jz9"; depends=[curl httr jsonlite]; }; elasticIsing = derive2 { name="elasticIsing"; version="0.2"; sha256="1zjgvz7w5j06x2cd1fzjl85di95ah67m1lanw01kic2bvhfwfbn6"; depends=[cvTools glmnet magrittr qgraph reshape2]; }; - elasticnet = derive2 { name="elasticnet"; version="1.1"; sha256="1x8rwqb275lz86vi044m1fy8xanmvs7f7irr1vczps1w45nsmqr2"; depends=[lars]; }; + elasticnet = derive2 { name="elasticnet"; version="1.1.1"; sha256="0p9dplnsp28z4s2fl6afbwrgd0aj339fak8mmndicmrh7bb7rpmb"; depends=[lars]; }; elasticsearchr = derive2 { name="elasticsearchr"; version="0.2.2"; sha256="0jawypqlk8374izh3gq9k6fwc2gwn74xa9lbmx4ww3rq2xp90xw6"; depends=[httr jsonlite]; }; elec = derive2 { name="elec"; version="0.1.2"; sha256="0f7ahrjb52w8a8l5v00xla6z9afpz2zrckl9v04xalp34snhdwan"; depends=[]; }; elec_strat = derive2 { name="elec.strat"; version="0.1.1"; sha256="09196k5c3jsikh98d33bn70izwcbx0wb5ki9fv1ij0dw9mnv4c3p"; depends=[elec]; }; elect = derive2 { name="elect"; version="1.1.2"; sha256="1m79z697abzrddy849kshwqfygji3n56xz0flwa7xrqhx3nqrj3b"; depends=[msm nnet]; }; elections = derive2 { name="elections"; version="1.0"; sha256="0ig3pd1dw978g2sg4ynzd3p15nk6hx17pxvbxfi5rm131mjdmjdm"; depends=[]; }; electionsBR = derive2 { name="electionsBR"; version="0.3.0"; sha256="18aq1yz2l2g4cjbmk18n5vl8x8lkp90xwm82l0bg1z1smyv3agan"; depends=[data_table dplyr haven magrittr]; }; - electoral = derive2 { name="electoral"; version="0.1.0"; sha256="0y4kkxm8vmj4gsan6qyhg28b0b6hgl4fghslk21d8w5w6syln4kh"; depends=[dplyr ineq tibble]; }; + electoral = derive2 { name="electoral"; version="0.1.1"; sha256="0lmw9kwr189dzfxzlns9fmhrdy93ja8jl2s4jir07lichyiavs03"; depends=[dplyr ineq tibble]; }; elementR = derive2 { name="elementR"; version="1.3.6"; sha256="12gg2x6xzms2ni80qdm04bfajg55ff6zkki0y2cz47kq70wzfkmg"; depends=[abind colourpicker devtools EnvStats gdata gnumeric httpuv lmtest outliers R6 reader readODS readxl shiny shinydashboard shinyjs stringr tcltk2 zoo]; }; elevatr = derive2 { name="elevatr"; version="0.1.4"; sha256="0gxwlcfn271p8gf2iqwqbi61kcaahfdghsc0rwm3xxxysjb5a2b2"; depends=[httr jsonlite progress raster ratelimitr sp]; }; elexr = derive2 { name="elexr"; version="1.0"; sha256="1xmrzlp55z6k3psdg4a3x3rsilvq3k37v9r7ydfn80ahvqjz0fqh"; depends=[]; }; elhmc = derive2 { name="elhmc"; version="1.1.0"; sha256="0ngva7rnfj75fq93ycsv929m9ykijp48r7cvd6sfmi0sqsjinax5"; depends=[emplik MASS plyr]; }; elliplot = derive2 { name="elliplot"; version="1.2.0"; sha256="186i4gr8k9bifzssblln8z6wxfmnplls3kc4m2liiz86mzsnim9r"; depends=[]; }; ellipse = derive2 { name="ellipse"; version="0.4.1"; sha256="0g82vc51m3c1k0hnpp2zla6amxxgk2mmkl8ssnsc49jv3599r6hs"; depends=[]; }; - elliptic = derive2 { name="elliptic"; version="1.3-7"; sha256="1bzd5x0yph76jh59ljl875grm52s8xpnmbgww1jjxx0hgkv7938g"; depends=[MASS]; }; - elmNNRcpp = derive2 { name="elmNNRcpp"; version="1.0.0"; sha256="0jl5vr2zszsapdvwcwg1m2li20k377jzyzdrz4inirsqfy5zlymq"; depends=[KernelKnn Rcpp RcppArmadillo]; }; + ellipsis = derive2 { name="ellipsis"; version="0.0.1"; sha256="02mv63ldvlqrcggxidxy5iiikpqia1z4ckjpnd7fjy91lvwy52ka"; depends=[]; }; + elliptic = derive2 { name="elliptic"; version="1.3-9"; sha256="0gw1klhp9l7xjmwgh43wrvwnvvyz7mbnfjn49hxy3yqsi4fjgnw1"; depends=[MASS]; }; + elmNNRcpp = derive2 { name="elmNNRcpp"; version="1.0.1"; sha256="1n71b5pqd1szhmp4q1h9aqgkx7s54f5i3xk5nljwzsn7cyih1kb3"; depends=[KernelKnn Rcpp RcppArmadillo]; }; elo = derive2 { name="elo"; version="1.0.1"; sha256="0dhlac5l68a3jps2hx0bc7qjj8hsr1ha137hcwxnrfdwnki6chlp"; depends=[pROC Rcpp]; }; emIRT = derive2 { name="emIRT"; version="0.0.8"; sha256="17igda5phgfapjzg7dkid5jj49gmwgpadjr27z7s21365i7md9mz"; depends=[pscl Rcpp RcppArmadillo]; }; - embryogrowth = derive2 { name="embryogrowth"; version="7.4"; sha256="10h80jy391bm1avmh347ly3a1vhlhbpfbhrf39xl7x4nwcckd6bp"; depends=[deSolve HelpersMG numDeriv optimx]; }; + embed = derive2 { name="embed"; version="0.0.1"; sha256="1xfk0zvs3bw10bipkqzjdgpz20kyrczk7lhsx6wyg6zrc7i3kk9f"; depends=[broom dplyr keras lme4 purrr recipes rlang rstanarm tensorflow tibble tidyr]; }; + embryogrowth = derive2 { name="embryogrowth"; version="7.4.1"; sha256="1qha6l7q0565fn9yfvp04dmlpf21hr754gh6fpzhqnrh58h371v1"; depends=[deSolve HelpersMG numDeriv optimx]; }; emdbook = derive2 { name="emdbook"; version="1.3.10"; sha256="0880cx6rqm9vgd2zxnd2k0igfl80gy7ak15w36clwlzavab59hmv"; depends=[bbmle coda lattice MASS plyr]; }; - emdi = derive2 { name="emdi"; version="1.1.2"; sha256="135dnc7djxa7kyhaa0rd42m396ccic4mgd5pq4qj8zqgd2swj2aa"; depends=[boot ggplot2 gridExtra HLMdiag maptools MASS moments MuMIn nlme openxlsx parallelMap readODS reshape2 rgeos]; }; + emdi = derive2 { name="emdi"; version="1.1.4"; sha256="0ghsxayv6d6bx9wfj6iafhaw5c6si2mqcpngj763pblnxjix8ag5"; depends=[boot ggplot2 gridExtra HLMdiag maptools MASS moments MuMIn nlme openxlsx parallelMap readODS reshape2 rgeos]; }; emdist = derive2 { name="emdist"; version="0.3-1"; sha256="1z14pb9z9nkd0f2c8pln4hzkfqa9dk9n3vg8czc8jiv0ndnqi7rq"; depends=[]; }; emg = derive2 { name="emg"; version="1.0.7"; sha256="1d4l9kcji6ba137f1qqjl763q2fd6bxryxsarc3iwi3mfi2b580m"; depends=[]; }; - emil = derive2 { name="emil"; version="2.2.8"; sha256="02xjf8ipqr136y3pa375lwpg6h63yvbphhghs9jjxfl2r4fdkvcn"; depends=[data_table dplyr ggplot2 lazyeval magrittr Rcpp tidyr]; }; + emhawkes = derive2 { name="emhawkes"; version="0.9.0"; sha256="1h6map6w66q91s6g1qr9wfk589cbvva1banqrxzzf29g7ihl15vh"; depends=[maxLik]; }; + emil = derive2 { name="emil"; version="2.2.10"; sha256="05f0i33rd9pp7kkpry1v1ysgny3bwi712glxlcj6qm4fmi0ciik6"; depends=[data_table dplyr ggplot2 lazyeval magrittr Rcpp tidyr]; }; emma = derive2 { name="emma"; version="0.1-0"; sha256="0psd8lrbcqla8mkhp0wlassaaimgwlmqy5yv2wwcq59mc5k1v27f"; depends=[clusterSim earth]; }; emme2 = derive2 { name="emme2"; version="0.9"; sha256="035s4h95ychqb14wib0dqbg4sjy9q01fsryr0ri25g1hsi5f8lpm"; depends=[reshape]; }; - emmeans = derive2 { name="emmeans"; version="1.2.2"; sha256="1ivrg1lp6cqffgg8hnfpw65zbkms6fbsgbw8nprbzfvfk7rrd8wd"; depends=[estimability mvtnorm plyr xtable]; }; + emmeans = derive2 { name="emmeans"; version="1.3.0"; sha256="0kdyy4qp332c4yyvp1cnh48h6ks6ffir5rjcv0py0vm3m8c3hh61"; depends=[estimability mvtnorm plyr xtable]; }; emoa = derive2 { name="emoa"; version="0.5-0"; sha256="1wcnsnkdmpcn21dyql5dmj728n794bmfr6g9hgh9apzbhn4cri8p"; depends=[]; }; emojifont = derive2 { name="emojifont"; version="0.5.2"; sha256="0s1as6i5dz2rbd1aashn99fji2iksjzrkdkfi7wqnnxxpmkha3yx"; depends=[ggplot2 proto showtext sysfonts]; }; emon = derive2 { name="emon"; version="1.3.2"; sha256="19khjjpyxvzhzihqq15w02l5v5ryyvxlklz1ch2gkmqcpnvyga32"; depends=[MASS mgcv]; }; emov = derive2 { name="emov"; version="0.1.1"; sha256="04w0bjyxvfb4ky573byp7j9b7x4gqycr5pgpnsl6rzag00zsf45a"; depends=[]; }; + empirical = derive2 { name="empirical"; version="0.1.0"; sha256="0flzb9nps0a5v5yc0jym2kyn20vpjm38a64vj7bda2bbxgdnqgbm"; depends=[]; }; empiricalFDR_DESeq2 = derive2 { name="empiricalFDR.DESeq2"; version="1.0.3"; sha256="0h2mcdw4v3ac6dn0s4z37l4sdzbi12sxrnn0f0gc9z207dyyf6w3"; depends=[DESeq2 GenomicRanges]; }; - emplik = derive2 { name="emplik"; version="1.0-3"; sha256="0b52383m2djdcg9b1a7r10k5pkzljz6dalvbg2gg962ckvpndb11"; depends=[quantreg]; }; - emplik2 = derive2 { name="emplik2"; version="1.20"; sha256="0qdsfmnvds01qa4f112knv905k0fzccrqj9fwaqrqcy48cigm8pd"; depends=[]; }; - emuR = derive2 { name="emuR"; version="1.0.0"; sha256="19740da4m22v9ys1z8q80khf71fjbaisn1f6whgal7p3cinvkcr3"; depends=[base64enc compare DBI dplyr httpuv jsonlite MASS purrr RCurl readr RSQLite shiny stringr tibble uuid wrassp]; }; + emplik = derive2 { name="emplik"; version="1.0-4.3"; sha256="1g4hz85bvw29c77zs0ig487z92jjl682vv457x81l077h0psvk7c"; depends=[quantreg]; }; + emplik2 = derive2 { name="emplik2"; version="1.21"; sha256="1980bwc4fc4rwzlwya030n5rv8rq0s82hnw955mvaxrbmicnqlla"; depends=[]; }; + ems = derive2 { name="ems"; version="1.2.0"; sha256="1ni18bq26hilszv1caslms7z63p9mfph3497nvyshiqvfw17nas8"; depends=[]; }; + emuR = derive2 { name="emuR"; version="1.1.0"; sha256="0677piygsyffrfba2cay74iymkhz3qvbin09v3pz3y0s0s3jxq1c"; depends=[base64enc compare DBI dplyr httpuv jsonlite MASS purrr RCurl readr rlang RSQLite shiny stringr tibble uuid wrassp]; }; emulator = derive2 { name="emulator"; version="1.2-17"; sha256="150yg99qzankcqs74jvp35al9gla5vnfylwaswcw6yryi239mgi8"; depends=[mvtnorm]; }; enaR = derive2 { name="enaR"; version="3.0.0"; sha256="0sy7k8l6b8p34bcf9bpjr1y6qkjkvn77y2w2ws7ivcr1fynrhm5p"; depends=[gdata limSolve MASS network sna stringr]; }; enc = derive2 { name="enc"; version="0.2.0"; sha256="0n4s3abxmpndppm18dcibap2n22xpjzafn5xjskfdfrz3wjfy1kb"; depends=[]; }; @@ -6119,10 +6391,10 @@ in with self; { endogenous = derive2 { name="endogenous"; version="1.0"; sha256="079fmfxl9gf080zq5m1ixmgry9dawg2y6ixbfyc5da5jxf3zk9h8"; depends=[mvtnorm]; }; endorse = derive2 { name="endorse"; version="1.6.0"; sha256="1j75sb2di2c092dilbjj5qsvb52h3zmm7wxflf9kg7xw227wq3zw"; depends=[coda]; }; endtoend = derive2 { name="endtoend"; version="1.0"; sha256="0x8f6h0mznmncqdwvsp2f0x524g5clgvk64qflf373lyn6h1v0ap"; depends=[]; }; - energy = derive2 { name="energy"; version="1.7-4"; sha256="12skvlridfq4jd5mh0yxl79ps0zi2xnlh4hsdgxad0gm7qky8awd"; depends=[boot Rcpp]; }; + energy = derive2 { name="energy"; version="1.7-5"; sha256="15k9dg0a82cs9ypm0wpcsff3il1hzhnnv86dv5ngby1r144czhi4"; depends=[boot Rcpp]; }; energyr = derive2 { name="energyr"; version="0.1.1"; sha256="1mid5f8l6v55pjzfx304a303mkn9b5r3jzmjl2fi2pz4v2jsdw04"; depends=[RgoogleMaps]; }; enetLTS = derive2 { name="enetLTS"; version="0.1.0"; sha256="0lqnhrsg9fnkn8z5crdrajpgavk1knr9z4sbdffpa6q9n8s5pmhr"; depends=[cvTools ggplot2 glmnet reshape robustHD]; }; - english = derive2 { name="english"; version="1.1-3"; sha256="032yc8ls3i6k5il40k3b0n55n2pj8zkm5kackrvsdsslywhainkw"; depends=[]; }; + english = derive2 { name="english"; version="1.1-4"; sha256="0bl2aqirnfb18zd8xmxcil62q38j6xjxs18gzkvg6vdjdajd2y0k"; depends=[]; }; engsoccerdata = derive2 { name="engsoccerdata"; version="0.1.5"; sha256="06fdgjgnk4lwshrkd0jad411x5nz9sxlri9fdhxrf2dr2hik4l8q"; depends=[dplyr magrittr tidyr]; }; enpls = derive2 { name="enpls"; version="6.0"; sha256="07cwxxxsz2rj6d9dhmbfbv1vmk753ca7yy8ssq8lp4lxz3n4cp6p"; depends=[doParallel foreach ggplot2 plotly pls reshape2 spls]; }; enrichR = derive2 { name="enrichR"; version="1.0"; sha256="0lfdr45sdyqhvgz8q4qdbk12mpv86d6id665kq6aaslgr8jggfmn"; depends=[httr rjson]; }; @@ -6138,35 +6410,41 @@ in with self; { entropy = derive2 { name="entropy"; version="1.2.1"; sha256="10vg4818q5g54pv2nn9x5i7pvky5nsv96syy47pz2mgqp1273cpd"; depends=[]; }; envDocument = derive2 { name="envDocument"; version="2.4.0"; sha256="0r7h9p0b0gr2l18mv1ydlamsc0iq474dfhp450mdfnw2q289mhrn"; depends=[]; }; envalysis = derive2 { name="envalysis"; version="0.3.3"; sha256="1ys93g5gxr9x1v4hg98dcpwa40n5xkh1j8drrmpnmxwq6gv01r6r"; depends=[drc ggplot2]; }; - enveomics_R = derive2 { name="enveomics.R"; version="1.3"; sha256="1m97lmgf42ifzafz91g69nnf4q918464xir9cqjjn6ch5i7lvi65"; depends=[fitdistrplus investr modeest sn]; }; + enveomics_R = derive2 { name="enveomics.R"; version="1.4.1"; sha256="1clq688whspmn4z1rdrhfnjc68p1yphw0myllps3gh148hqxh8mp"; depends=[fitdistrplus investr modeest sn]; }; enviGCMS = derive2 { name="enviGCMS"; version="0.5.0"; sha256="0q7kyygfwphd553lgnv8pa0zghcjj4wvq2qyh8lx2plj9fp5am3n"; depends=[animation BiocParallel broom genefilter mixtools MSnbase rcdk RColorBrewer reshape2 rmarkdown shiny xcms]; }; enviPat = derive2 { name="enviPat"; version="2.2"; sha256="1cf1h4v05riivjwil4167sncdxzgxf3r4snx1imjb6s4msx67ibi"; depends=[]; }; enviPick = derive2 { name="enviPick"; version="1.5"; sha256="04q6zwqq2ip8b8h2n1jpgx1bzcvi7lazljs0806wiakbc79x232p"; depends=[readMzXmlData shiny]; }; envirem = derive2 { name="envirem"; version="1.3"; sha256="1axgbjl4wh44vd5r9n9rbxxsi35k806r1kdvrcmmpkzwam6zd2lp"; depends=[raster RSAGA]; }; envlpaster = derive2 { name="envlpaster"; version="0.1-2"; sha256="11a5n40k1ln5gxxvwq1vh4dhmhifhlm89hkhf36qnhj4bjh3v3y0"; depends=[aster aster2 caTools MASS]; }; + envnames = derive2 { name="envnames"; version="0.3.0"; sha256="1gssjkpx7ngxpbn05c3c74myp4131wx032cf27gxvsvnqb6nn7j5"; depends=[]; }; epade = derive2 { name="epade"; version="0.3.8"; sha256="1alvsifc6i71ilm1xxs1d7sqlapb48bqd6z2n4wi6pqcjvwp7bif"; depends=[plotrix]; }; epandist = derive2 { name="epandist"; version="1.1.1"; sha256="0hxgbjns5bk82rgcmykxifnnxcnqdzmkimkkmpdif64zr5g3gjdg"; depends=[]; }; - epanet2toolkit = derive2 { name="epanet2toolkit"; version="0.2.1"; sha256="18drz4pi2mqqwp2ji3a8k6mxh04n8yrwggf2p1k7bg3jchgh0kx3"; depends=[]; }; + epanet2toolkit = derive2 { name="epanet2toolkit"; version="0.3.2"; sha256="0j64riiy7b2v1m8ki6d43jm61s7yjwlx4kxxdvlz3fx1xw7qf522"; depends=[]; }; epanetReader = derive2 { name="epanetReader"; version="0.7.3"; sha256="05pwa6z03qsjwr9pxpbxycsd21p7mf5j5ajyg4yaas5g100s1k8c"; depends=[]; }; epiDisplay = derive2 { name="epiDisplay"; version="3.5.0.1"; sha256="08ym6hcbmajzr4rasdb35fxk79vgpzfc16rmcm34f7f3zzz09dyl"; depends=[foreign MASS nnet survival]; }; - epiR = derive2 { name="epiR"; version="0.9-96"; sha256="0gy2w49mbi9rpxw8bxb5d6i0zddl319ba1wcp24km165h9pvrs9d"; depends=[BiasedUrn survival]; }; + epiR = derive2 { name="epiR"; version="0.9-97"; sha256="06x502f8pyyigafjb1cyc3d0qbvfk1qj5vy7n30lvz9hvp1rgph2"; depends=[BiasedUrn survival]; }; epibasix = derive2 { name="epibasix"; version="1.3"; sha256="0d0087sa8lqw35pn7gdg2qqzw3dvz57sgavymwl1ybcj5d4lsbyk"; depends=[]; }; epicontacts = derive2 { name="epicontacts"; version="1.1.0"; sha256="0f4a1y311z3fxw7ygj6fgsq6d2qn0ivxsjlh742pkmg3jb63s0f3"; depends=[colorspace dplyr igraph magrittr threejs visNetwork]; }; epidata = derive2 { name="epidata"; version="0.2.0"; sha256="0n0100fy65kgw3c7gdmb5z5hmla5ch51b7872snf525a2r581i28"; depends=[dplyr httr jsonlite purrr readr rvest stringi tidyr xml2]; }; + epiflows = derive2 { name="epiflows"; version="0.2.0"; sha256="09ri1p73ih0i08irc06ff169hi5vcl8bdi63b056kzxgmv17yqkp"; depends=[epicontacts geosphere ggmap ggplot2 htmltools htmlwidgets leaflet sp tibble visNetwork]; }; + epimdr = derive2 { name="epimdr"; version="0.6-1"; sha256="1lcl9sk3c958dm225w33kaln76y4x9mkx5y2c9kh8wd0xz891p8v"; depends=[deSolve phaseR polspline shiny]; }; epinet = derive2 { name="epinet"; version="2.1.8"; sha256="10bgq66n99kkz0nhmsz508aypxk57zk19p5l3xrb28n72k4rfgrf"; depends=[network]; }; epiphy = derive2 { name="epiphy"; version="0.3.4"; sha256="04wsppjycnrzrml3zxrpr0xdxxas3hj8rskiivx5vfmfjpwipq4r"; depends=[ggplot2 msm pbapply Rcpp transport]; }; + episcan = derive2 { name="episcan"; version="0.0.1"; sha256="02687f8gpc2czn19lapvazd6mnm8902ay0lhgi3wdrzfhir42m4r"; depends=[]; }; episensr = derive2 { name="episensr"; version="0.9.2"; sha256="1w1228q8q2ysi3xi3m8a9z0c7japj97dssjkzpjcrng094cy82is"; depends=[actuar boot ggplot2 gridExtra llogistic logitnorm plyr reshape trapezoid triangle]; }; - episheet = derive2 { name="episheet"; version="0.2.0"; sha256="15c4xbam9b60xkkgmbswj4raln49hk43pxp2l75a7j1wykgkif95"; depends=[dplyr ggplot2 magrittr tidyr]; }; + episheet = derive2 { name="episheet"; version="0.3.0"; sha256="0lp0hd2xyiyrb9z46fjifcirv1wxfh3dkn5chlkhkzr2s5xvbl76"; depends=[assertthat dplyr ggplot2 magrittr rlang tidyr]; }; episode = derive2 { name="episode"; version="1.0.0"; sha256="1djk36jkvr8xvhfddqg6xsmhxc3yrgivkm8g2hr4n1qixsk1ad8m"; depends=[glmnet Matrix nnls Rcpp RcppArmadillo]; }; episplineDensity = derive2 { name="episplineDensity"; version="0.0-1"; sha256="0nmh97xajnnh54i04yq8fdici4n5xvcbpdbjdbz79483gnils4vn"; depends=[nloptr pracma]; }; epistasis = derive2 { name="epistasis"; version="0.0.1-1"; sha256="0dfh26bs72i01hpxpgpgyiwpmg9mjpib8zynhc5ssxa0skm518wz"; depends=[glasso igraph Matrix tmvtnorm]; }; epitab = derive2 { name="epitab"; version="0.2.2"; sha256="0yi65bblsikwsa9i7wys1mqf6pp6j01kyc8xkyrhs5n62y1k68nc"; depends=[kableExtra knitr MASS survival xml2]; }; epitools = derive2 { name="epitools"; version="0.5-10"; sha256="1qqa2kam3j3mkbgk62g6lwygk2fkdlrpbi27wl37j4dkdkvx013m"; depends=[]; }; - epitrix = derive2 { name="epitrix"; version="0.2.0"; sha256="1699v13478379waxkjsimxsq92ya2vd98kddvsv0dr7fldwl4png"; depends=[digest distcrete stringi]; }; + epitrix = derive2 { name="epitrix"; version="0.2.1"; sha256="13nk31h4rdpla5m0fskv8s1fwx0r2qh4d0j4cf8vnlbl12rwyh57"; depends=[digest distcrete stringi]; }; + eplusr = derive2 { name="eplusr"; version="0.9.3"; sha256="0rwshvgsrrcc21ladkmq2zj5vyzkijn5bcj9aiyqpzrwnpmz5iv4"; depends=[assertthat callr cli crayon data_table fasttime later lubridate processx progress R6 readr RSQLite stringr units uuid]; }; eply = derive2 { name="eply"; version="0.1.2"; sha256="0al44pvqf6ls3dh129vlv3g56hk1nbql09rj0qsb04d9kaz9anrp"; depends=[magrittr]; }; epoc = derive2 { name="epoc"; version="0.2.5-1"; sha256="1r19cvcqf39yf09n3znbdy3dsr7z96yx6zib6031mqqdsxaav5qd"; depends=[elasticnet graph irr lassoshooting Matrix Rgraphviz survival]; }; + epos = derive2 { name="epos"; version="0.1.0"; sha256="0b9r552hbrs281z7pxxw1hxgv9d15qmyzvgk5xsrgh8wivkh4lwp"; depends=[dplyr ggplot2 gridExtra hashmap stringr testthat tidyr TopKLists xtable]; }; epr = derive2 { name="epr"; version="3.0"; sha256="0czfz6qkcpa2qqs3pqii27hgpdvdzfrvxl0ip67v58hamq7kvjfv"; depends=[car lme4]; }; - epubr = derive2 { name="epubr"; version="0.4.0"; sha256="0lh4fw16fb6qisygq8k7yf1cg6gm2yi8fqfsfwlaacb43d12bxzm"; depends=[dplyr magrittr purrr tidyr xml2 xslt]; }; + epubr = derive2 { name="epubr"; version="0.5.0"; sha256="01ggkwv6l7j7zs70s53vjajfh9i0i7zvajmbqq1ij48b3mrc6y05"; depends=[dplyr magrittr purrr tidyr xml2 xslt]; }; epxToR = derive2 { name="epxToR"; version="0.3-0"; sha256="0ckz7cvqsdilfkqap88brh4av9zv1fl3ijs4h4vlwwn7qvdcnhay"; depends=[httr XML]; }; eqs2lavaan = derive2 { name="eqs2lavaan"; version="3.0"; sha256="1lj6jwkfd84h9ldb6l74lrx2pnsl1c0d7mnrcrjkska87djb2nzd"; depends=[lavaan stringr]; }; eqtl = derive2 { name="eqtl"; version="1.1-7"; sha256="0xfr8344irhzyxs9flnqn4avk3iv1scqhzac5c2ppmzqhb398azr"; depends=[qtl]; }; @@ -6174,28 +6452,29 @@ in with self; { equalCovs = derive2 { name="equalCovs"; version="1.0"; sha256="18w7panyd6mhdr3x1iz9fkrw7min22rishs4xhkxgxs3nnyglkrn"; depends=[]; }; equaltestMI = derive2 { name="equaltestMI"; version="0.1.0"; sha256="1zqhgx1x6lqjwqisl3ydb6yqp3jn6x7dgnc57r93v73sjx2j5aiz"; depends=[lavaan]; }; equate = derive2 { name="equate"; version="2.0.7"; sha256="07cji0z139fk70d4wvrpk5m34fq1pfnqrsw336lgnp5a7zp3jz7n"; depends=[]; }; - equateIRT = derive2 { name="equateIRT"; version="2.0-5"; sha256="0pkcg2331yaq05sn7164qvw3zqq5jxzh34k0c48zbam240ga94js"; depends=[mirt statmod]; }; + equateIRT = derive2 { name="equateIRT"; version="2.1.0"; sha256="1g8gs00ralh5zw1fv3xd4c2xrb8gxgb7srcp0hgbpr0f7hw53fjm"; depends=[mirt statmod]; }; equateMultiple = derive2 { name="equateMultiple"; version="0.0.0"; sha256="0q29bv8bb0c3sprhnkbbpn31phw37dwgk23v5ny4abzvlcgwncdb"; depends=[equateIRT numDeriv Rcpp RcppArmadillo statmod]; }; equivalence = derive2 { name="equivalence"; version="0.7.2"; sha256="170l5gnk0dkjkfsx7qyrw56ircwsjzz9cvhakgyrqh7bj5734i79"; depends=[boot lattice PairedData]; }; - erah = derive2 { name="erah"; version="1.0.5"; sha256="00vygdrngbp53wip2x6dni3ygwax309i9si3gyqkxxbbkpv24b7i"; depends=[caTools HiClimR igraph ncdf4 nnls osd quantreg Rcpp signal XML]; }; + erah = derive2 { name="erah"; version="1.1.0"; sha256="1jp75z9y97v0dr656qqcf3npsijk91x5f2lyiwjy54yrzlf5bxp5"; depends=[igraph ncdf4 nnls quantreg Rcpp signal XML]; }; erboost = derive2 { name="erboost"; version="1.3"; sha256="09hlpn6mqsmxfrrf7j3iy8ibb2lc4aw7rxy21g3pgqdmd9sbprim"; depends=[lattice]; }; ercv = derive2 { name="ercv"; version="1.0.0"; sha256="1h0v0gscf1ks1shkdvkn1g8r8x5jsb66a4m7rnpdfwbp2ijh41gp"; depends=[]; }; erer = derive2 { name="erer"; version="2.5"; sha256="0wgzd7r63d20vghmbilqn1p5033i5p31asya1gzwlipgyfxmqp0b"; depends=[lmtest systemfit tseries urca]; }; - ergm = derive2 { name="ergm"; version="3.8.0"; sha256="1j4rqgxnwg4hcjg2knw3kvwad97035fxp9dqxx4pz6nlkmcib2js"; depends=[coda lpSolve MASS Matrix network robustbase statnet_common trust]; }; - ergm_count = derive2 { name="ergm.count"; version="3.2.2"; sha256="1zg07vm5y6n6r687sbdy5hcinsircm4zzkx5w4849s9kwjlnpn0b"; depends=[ergm network statnet_common]; }; - ergm_ego = derive2 { name="ergm.ego"; version="0.3.0"; sha256="1152g9zz2wach0hbj27knxficvhf062alqa0wpj6nyqj2vsgnchh"; depends=[coda ergm network RColorBrewer statnet_common]; }; - ergm_graphlets = derive2 { name="ergm.graphlets"; version="1.0.3"; sha256="0xk45ialjckvjs96k19skk7imilcahgyzfwc74h6yand5q3mg6fz"; depends=[ergm network statnet_common]; }; - ergm_rank = derive2 { name="ergm.rank"; version="1.0.1"; sha256="0k5ffqxn9fspbg82j2cmrcyav3nqjk7cnsq48xwy9i3z3vaq704k"; depends=[ergm network statnet_common]; }; - ergm_userterms = derive2 { name="ergm.userterms"; version="3.1.1"; sha256="0pvklvyxi7sjc5041zl8vcisni0jz1283gyjw5mhas9bl47g1cwc"; depends=[ergm network statnet_common]; }; + ergm = derive2 { name="ergm"; version="3.9.4"; sha256="0bmxha66p6i0sk9csav4wv9v7bz153c7zgwfdd1q8abmiwxpi3al"; depends=[coda dplyr lpSolve MASS Matrix network purrr rlang robustbase statnet_common tibble trust]; }; + ergm_count = derive2 { name="ergm.count"; version="3.3.0"; sha256="184kxbabrdm8ywmr8pmz34wqyrv6712abggb2pf3mpiv7nblqjz1"; depends=[ergm network statnet_common]; }; + ergm_ego = derive2 { name="ergm.ego"; version="0.4.0"; sha256="07r0wfx1414d54l5y43axkp1av9ig1bwyxs8011w2grkmxhawavj"; depends=[coda ergm network purrr RColorBrewer rlang statnet_common tibble]; }; + ergm_rank = derive2 { name="ergm.rank"; version="1.1.0"; sha256="0mzwi5a3mf46nw8m1yychqnvysrps46dn8pp0xliyhcs4h0c3y0l"; depends=[ergm network statnet_common]; }; + ergm_userterms = derive2 { name="ergm.userterms"; version="3.9.0"; sha256="0nccz7qwrn20xd78dlnq2dfb8167s9jglvk40wa0lmcjlz8x62n3"; depends=[ergm network statnet_common]; }; ergmharris = derive2 { name="ergmharris"; version="1.0"; sha256="1bfijhsljlykb94wi25lbpv35zkmgqpmgzmxcq98gjvzbn5j9pdq"; depends=[]; }; - erhcv = derive2 { name="erhcv"; version="0.1.2"; sha256="1rbgp5ba7drghfgcjfg546210m7pknfmgcbk4n68jpy39c267rvn"; depends=[igraph Rdpack stringi stringr]; }; + erhcv = derive2 { name="erhcv"; version="0.1.3"; sha256="01wrjrcvpavw0yd4vhhyiyjda3m4mrh4dirh1a48bwy10nvfb4x0"; depends=[igraph Rdpack stringi stringr]; }; erp_easy = derive2 { name="erp.easy"; version="1.1.0"; sha256="193n45w0rq3cy0nmxvv0h6s3yr8kfjlg90nd4dnqlsq85zlsizij"; depends=[gtools plyr signal]; }; erpR = derive2 { name="erpR"; version="0.2.0"; sha256="1y6abc5fkcyyjh36maj1zbxppqzwd5wkvzvqahyvzsz5fqpjkcdx"; depends=[rpanel]; }; + err = derive2 { name="err"; version="0.0.1"; sha256="0mkd5hr5pd7zqqbs205whcjm0gsg6sn5nd5abw7i46v0rq4xxvfp"; depends=[]; }; errint = derive2 { name="errint"; version="1.0"; sha256="1ya7fsvwhmgxw87r32m4345n8pw2pbpv026xvml03s1kiam8qwbw"; depends=[rootSolve VGAM]; }; errorist = derive2 { name="errorist"; version="0.0.1"; sha256="1569yvncc9rdzchs7cvx44dhy8xf10g2hwkiy3kp68h47qghxlbd"; depends=[searcher]; }; errorizer = derive2 { name="errorizer"; version="0.2.1"; sha256="10p7ydm81x2gls0wn692llgj2rxhg4s96rv7gvihmgi5dflraypq"; depends=[]; }; errorlocate = derive2 { name="errorlocate"; version="0.1.3"; sha256="0hfm0nad1bfh7a37zpn4aljrf69yc6dddz9iq46c1mzyrw116a9f"; depends=[lpSolveAPI validate]; }; - errors = derive2 { name="errors"; version="0.2.1"; sha256="1hf7nqyhyv0n4qn5bzs1gb59fbn6vsiji0va8hpzzw3af0h3dqzy"; depends=[]; }; + errors = derive2 { name="errors"; version="0.3.0"; sha256="1mdsqnsrrrx0fqpasllv05j2m1ykv6qj8il0647i9sxfqmsijjhk"; depends=[uuid]; }; + esDesign = derive2 { name="esDesign"; version="1.0.0"; sha256="0d56zg9wvkds4jqrw3gdyz2hgyrhsghky3cbjfkgfba4lzing8zn"; depends=[]; }; esaBcv = derive2 { name="esaBcv"; version="1.2.1"; sha256="0hgjcdbiy1a71vsb2vcyp0xmhy6wi4nlh1sqsfb2vxckc95i9i21"; depends=[corpcor svd]; }; esaddle = derive2 { name="esaddle"; version="0.0.3"; sha256="04imppwls6a485kdfwykk4s0pyxas3i92ccghi780ys29y0nggmy"; depends=[doParallel mvnfast plyr Rcpp RcppArmadillo]; }; esaps = derive2 { name="esaps"; version="0.1.0"; sha256="1rchs4i7n221gyhj9kbka4zmi2lf72q3ak2pdxkr7w6pcx6803yz"; depends=[plyr readODS readxl]; }; @@ -6204,22 +6483,22 @@ in with self; { eshrink = derive2 { name="eshrink"; version="0.1.0"; sha256="0s1jl652za7qwv70kmc1h3vbwlijl49527pwpm0z347lz2jdcigj"; depends=[glmnet MASS]; }; esmisc = derive2 { name="esmisc"; version="0.0.3"; sha256="1d6xrdxwn85c8s60s7vzaymh7wa9f7fzd79hq5spzd12fr3zisvj"; depends=[ggplot2 raster readr]; }; esmprep = derive2 { name="esmprep"; version="0.1.4"; sha256="1d1rr11fldxsamn19za03sdyvvybkh3bm5zvlrlkz022jj7pgxlr"; depends=[lubridate]; }; + esquisse = derive2 { name="esquisse"; version="0.1.6"; sha256="0s9qp87n741wsg8sazpyzx4br7pd2p3wmipiig4bj71n7wy3wvwa"; depends=[ggplot2 ggthemes htmltools jsonlite miniUI RColorBrewer rstudioapi scales shiny shinyWidgets stringi]; }; esreg = derive2 { name="esreg"; version="0.3.1"; sha256="19ikfy0g8yd224ah4gyq2k29lz3gagc6vrcv53awvdadqw0cpz8l"; depends=[quantreg Rcpp RcppArmadillo]; }; - ess = derive2 { name="ess"; version="0.1.1"; sha256="1i94sfg8r9mnzcmyddq3zb56gwkgqdclyx90a5plpyy5insk13d7"; depends=[haven httr rvest stringr tibble xml2]; }; essHist = derive2 { name="essHist"; version="1.1.1"; sha256="06wmvwjgbb1bfsjn4bv3p2m0i5nc6shn2p62kjp3iv6z42f5wndc"; depends=[Rcpp]; }; - essurvey = derive2 { name="essurvey"; version="1.0.1"; sha256="0ks2qx6pzw5g1q6hzaymlcy6slkapw8iajn10gs7l1h5ybdf5w6l"; depends=[haven httr rvest stringr tibble xml2]; }; + essurvey = derive2 { name="essurvey"; version="1.0.2"; sha256="0r1hkdksidx974pi08hg25qlzfxazqmzamwqg2njks2r9xk299p8"; depends=[haven httr rvest stringr xml2]; }; estatapi = derive2 { name="estatapi"; version="0.3.0"; sha256="0gjc5x1b2l5qnwdg77nzy6d7bf9q93ll39sfy89izqm8wsydwwkp"; depends=[dplyr httr purrr readr]; }; estimability = derive2 { name="estimability"; version="1.3"; sha256="0cifdaa71spkcxl4db4z884jrya865sg3dhcv4isd8fnzg2pjcd3"; depends=[]; }; - estimatr = derive2 { name="estimatr"; version="0.8.0"; sha256="0xn1rk5z5n9llg9l55wab2lpcvx3azbrkjrfwi84mc3xk1m24y3p"; depends=[Formula Rcpp RcppEigen rlang]; }; + estimatr = derive2 { name="estimatr"; version="0.12"; sha256="1xqhbr8dp86vli1da47whl130ljdn8l6h8j1lgsa12dfkz5amj6d"; depends=[Formula Rcpp RcppEigen rlang]; }; estout = derive2 { name="estout"; version="1.2"; sha256="0whrwlh4kzyip45s4zifj64mgsbnrllpvphs6i5csb7hi3mdb3i5"; depends=[]; }; estprod = derive2 { name="estprod"; version="1.1"; sha256="15grcpyhaazd1sl8544gx4zpjqi9p17d6siyb6a1ykzzyy1v1fln"; depends=[boot Formula gmm lazyeval minpack_lm]; }; estudy2 = derive2 { name="estudy2"; version="0.8.5"; sha256="0aqvlgzp98965xmjmmg2dxj79bjcvgv0qa89h5l1lp0i0c23p908"; depends=[matrixStats quantmod Rcpp zoo]; }; esvis = derive2 { name="esvis"; version="0.2.0"; sha256="0l4c87l9n94q14hwky7d7i4h9c5zh8r04zlcz9w4mx7ixfd34zir"; depends=[sfsmisc]; }; etable = derive2 { name="etable"; version="1.2.0"; sha256="17xahaf2fz1qgqjaw8qbnss95il6g47m3w00yqc5nkvv37gs0q7c"; depends=[Hmisc xtable]; }; etasFLP = derive2 { name="etasFLP"; version="1.4.0"; sha256="04d526yajakzivlcsz8631p0j482cbbgfpdmzkc9zr1m4495xxif"; depends=[fields mapdata maps rgl]; }; - ether = derive2 { name="ether"; version="0.1.4"; sha256="1q6qxda5iw8zj7gy9h35apij5mbndd969ddip7zn5d720131kqra"; depends=[dplyr httr jsonlite Rmpfr]; }; + ether = derive2 { name="ether"; version="0.1.5"; sha256="03skydbw4ch0lhhlm57qgg4q0vyd4rwzsq3v2w40jrczpxpdsn9q"; depends=[dplyr httr jsonlite Rmpfr]; }; etl = derive2 { name="etl"; version="0.3.7"; sha256="045hkh95ki3s10l9mz4710ws2i9and4rqb0qk1c5sfslglc0riq5"; depends=[DBI downloader dplyr lubridate readr rlang rvest stringr tibble xml2]; }; - etm = derive2 { name="etm"; version="1.0.3"; sha256="1srbllbmc2l1kcw2zi15sja8g3bkwz8bvy7k8al45dhyz8zdrxra"; depends=[data_table lattice Rcpp RcppArmadillo survival]; }; + etm = derive2 { name="etm"; version="1.0.4"; sha256="0ws103b3pmli0z4xbyfxkly2wnnnxnnwc0r66qjjqjrlvm7pffl1"; depends=[data_table lattice Rcpp RcppArmadillo survival]; }; etma = derive2 { name="etma"; version="1.1-1"; sha256="0g9244yx50y1gw0f37hskbcgyv4nldmzr86v3rmf3afabmjbyzjj"; depends=[]; }; etrunct = derive2 { name="etrunct"; version="0.1"; sha256="0ayazgyqlc8jcqr03cwfmfhm4pck6xri1r6vkgqy4arqkrrnrcqr"; depends=[]; }; etseed = derive2 { name="etseed"; version="0.1.0"; sha256="1kqbhvryqzmckk91ynn68yd7msqdsl6h818r164180f10flszr37"; depends=[httr jsonlite R6]; }; @@ -6227,10 +6506,10 @@ in with self; { eulerr = derive2 { name="eulerr"; version="4.1.0"; sha256="1y4s4g49sy7bkkbadj7a8la86h9yy9lzra5jawy2ig1aa3k81d98"; depends=[GenSA lattice polyclip Rcpp RcppArmadillo]; }; europepmc = derive2 { name="europepmc"; version="0.3"; sha256="1ngqs1sqzkbwv98dd5z4cxj8bnz41wyd0g060a2vpqi3s99s4i2h"; depends=[dplyr httr jsonlite plyr progress purrr urltools xml2]; }; europop = derive2 { name="europop"; version="0.3.1"; sha256="1ym257bxr4a0dmln1j8x3pf87wrryzgqyzhvk61whc6n2bj62x1s"; depends=[]; }; - eurostat = derive2 { name="eurostat"; version="3.2.1"; sha256="1934lzxzs0l96c3bwwy5lpgm8kxrd55hdcmbn4prg2pzzj32wxfv"; depends=[broom classInt curl dplyr httr jsonlite RColorBrewer readr sf sp stringi stringr tibble tidyr]; }; - eva = derive2 { name="eva"; version="0.2.4"; sha256="03jsiz6bkavwxpgllxaw8czahmm2rh5h8hhk5j7i9clcjx244vvj"; depends=[EnvStats Matrix]; }; - evaluate = derive2 { name="evaluate"; version="0.10.1"; sha256="070vvmnbdlp7sz2zhza7fhd2a6mlwiln8fn4hyzhsiizbn4n79y9"; depends=[stringr]; }; - evaluator = derive2 { name="evaluator"; version="0.3.0"; sha256="1dgihzai2p47zjfjb4wnl5rvwahfsxcaqaywdsf039p0g820nr8f"; depends=[dplyr extrafont furrr ggplot2 mc2d purrr readr readxl rlang scales stringi tibble tidyr viridis]; }; + eurostat = derive2 { name="eurostat"; version="3.2.9"; sha256="0nwsjyhyflsq48kf8w6x3fv2qscqq0pz0dl93s221nbgd94qlyad"; depends=[broom classInt dplyr httr jsonlite RColorBrewer readr sf sp stringi stringr tibble tidyr]; }; + eva = derive2 { name="eva"; version="0.2.5"; sha256="03hyzbqi2mgdrmzrjnwzvy0ndf7ha5959b63sgd1g0b998fibbmd"; depends=[EnvStats Matrix]; }; + evaluate = derive2 { name="evaluate"; version="0.12"; sha256="11rpn40153kcvqqrfhg2ldqfs68frg6yzsl0k3rxnlnv4c0v008g"; depends=[]; }; + evaluator = derive2 { name="evaluator"; version="0.3.1"; sha256="1xyj8nc74dg2si6j4j9d35wa0qsymskpkpfd89acl0dcs07sg62j"; depends=[dplyr extrafont furrr ggplot2 mc2d purrr readr readxl rlang scales stringi tibble tidyr viridis]; }; evclass = derive2 { name="evclass"; version="1.1.1"; sha256="00lbhcgswpv0amz0mb93kx9p91sf0d7zvxfw9i8x1zpmpfd6nhcj"; depends=[FNN]; }; evclust = derive2 { name="evclust"; version="1.0.3"; sha256="0cd0a8w0ixd9ilcqlxiaql4l2r49qrqnllb9qpg3xgnlxka3yb5m"; depends=[FNN limSolve Matrix R_utils]; }; evd = derive2 { name="evd"; version="2.3-3"; sha256="1d2r8ppblxrq6s60pf0gv4rp8ja58j8lbpax8a996ais1hpfzi9g"; depends=[]; }; @@ -6239,6 +6518,7 @@ in with self; { eventInterval = derive2 { name="eventInterval"; version="1.3"; sha256="0nybzy2mpmazcvz06mkv7l9741mjm3i2q2sindq0777vb2k4504v"; depends=[MASS]; }; eventdataR = derive2 { name="eventdataR"; version="0.2.0"; sha256="11apbbj68x1kxpwvihf4ng7wxy54jl1aw7r9hyq6gn7h8sk6lpjn"; depends=[]; }; events = derive2 { name="events"; version="0.5"; sha256="1zka4ygymifs8snd7cabl11b5lg3f8g8370dkm9ybl40bn8vvqq2"; depends=[]; }; + evian = derive2 { name="evian"; version="2.0.0"; sha256="18j8yl647xwr02mr0f8v9jwrqm0mr6s2jfhsanl4ggyq2v7nyw1d"; depends=[doParallel foreach ProfileLikelihood sandwich]; }; evidence = derive2 { name="evidence"; version="0.8.10"; sha256="02kqk95kx4nv13fg6z55a5rv6sq6lv8azg0jjxbkg1j6hg15p7ai"; depends=[LaplacesDemon lattice LearnBayes loo rstan rstanarm]; }; evidenceFactors = derive2 { name="evidenceFactors"; version="1.00"; sha256="12wndimbygn7h57f3q0xmxmvqrcdj98f0a58m22z2l0vmym53rhb"; depends=[sensitivitymv]; }; evir = derive2 { name="evir"; version="1.7-4"; sha256="1h7a7z7v5k33y5hsdfczsri3vpbwspfgazhv4saknv2h11rgfpki"; depends=[]; }; @@ -6246,35 +6526,36 @@ in with self; { evobiR = derive2 { name="evobiR"; version="1.1"; sha256="0502xj1gv2g943vfqyllz4sr5z4mixf5vqlqi2v96mymnv9iwsr8"; depends=[ape geiger phytools seqinr shiny]; }; evolqg = derive2 { name="evolqg"; version="0.2-5"; sha256="11n0gxkxhg1d2ziwbipqvyccgnsrzm3mk4xy2d7nxn662q1yl2ah"; depends=[ape coda expm ggplot2 igraph Matrix matrixcalc MCMCpack mvtnorm plyr Rcpp RcppArmadillo reshape2 vegan]; }; evolvability = derive2 { name="evolvability"; version="1.1.0"; sha256="0lbyidb86yzvcfw86jfwnzbpijn64jr8fasycqq4h3r9c0x2by3j"; depends=[coda]; }; - evoper = derive2 { name="evoper"; version="0.4.0"; sha256="11l55jj7f4ggwvimvl3d2sv2nyds29bl4dai6ycpgnff7wwdv43g"; depends=[boot deSolve futile_logger ggplot2 plot3D plyr reshape rrepast]; }; + evoper = derive2 { name="evoper"; version="0.5.0"; sha256="064fcpd04ws8v6sl0bakiw34jmmfpg1w5pkq94y2gh1c576x4vwz"; depends=[boot data_table deSolve futile_logger ggplot2 plot3D plyr reshape RNetLogo rrepast]; }; evt0 = derive2 { name="evt0"; version="1.1-3"; sha256="08sbyvx49kp3jsyki60gbbnci26d6yk0yj2zcl4bhfac8c3mm6ya"; depends=[evd]; }; evtree = derive2 { name="evtree"; version="1.0-7"; sha256="1swq4cmx7hvsagn1nfavay5rg5r5axjxpcckvd3sy6lgvwvflcnq"; depends=[partykit]; }; ewoc = derive2 { name="ewoc"; version="0.2.0"; sha256="0kanx14fhcbqz6gpyj7628vgy9fwz3ji5mkd4107b8pgpz2hkg00"; depends=[coda doParallel foreach Formula ggplot2 rjags]; }; exCon = derive2 { name="exCon"; version="0.2.5"; sha256="0gqnv01dw4ncf3x3p74pc6f14a1ixq7icl2p18hsmvxdqqg7kgy7"; depends=[jsonlite]; }; - exact2x2 = derive2 { name="exact2x2"; version="1.6.2"; sha256="172g6ahgd7j42bjidp6svjl70ws3bz58vb8vxgnalii6awcizkcm"; depends=[exactci ssanv]; }; + exact2x2 = derive2 { name="exact2x2"; version="1.6.3"; sha256="11ayh6j6jj4p4bns3s2c2nmnigdzr6hpwjp4b2i7qw67kd321agn"; depends=[exactci ssanv]; }; exactLoglinTest = derive2 { name="exactLoglinTest"; version="1.4.2"; sha256="0j146ih9szzks9r45vq1jf47hrwjq081q1nsja5h1gpllks8217h"; depends=[]; }; exactRankTests = derive2 { name="exactRankTests"; version="0.8-29"; sha256="0sj4bf0sab2rsgh967i5jl7ml2l1niydqmyn7c6ybai1gavsdpi1"; depends=[]; }; exactci = derive2 { name="exactci"; version="1.3-3"; sha256="03r35f6dyrck5pf43ypb1sjwfnvkhjkm1mbms3wh67ayfs2ypn0s"; depends=[ssanv]; }; exactmeta = derive2 { name="exactmeta"; version="1.0-2"; sha256="1v807ns799qajffky4k18iah0s3qh2ava6sz5i85hwx9dhkz19h4"; depends=[]; }; - exampletestr = derive2 { name="exampletestr"; version="1.3.0"; sha256="1z4lw115y5ijjb603rvy63a5gvhgymkq00ak0z6da2y5p6ym5rp3"; depends=[checkmate devtools filesstrings magrittr ore purrr readr roxygen2 rprojroot stringr styler]; }; + exampletestr = derive2 { name="exampletestr"; version="1.4.0"; sha256="1k3qq0cqg1ksll3xa26cyr3yf1wcpl6sy013rs8lcid30cgn1pqp"; depends=[checkmate clisymbols crayon devtools filesstrings fs glue magrittr ore purrr readr rlang roxygen2 rprojroot stringr styler usethis]; }; exams = derive2 { name="exams"; version="2.3-1"; sha256="0xg2rvfw61q5g9aj828219fqdnrwhy698xy7mkrcaly9mq95zs8b"; depends=[]; }; excerptr = derive2 { name="excerptr"; version="1.4.1"; sha256="0z5gayf7kkhdg7ad2w4ycar5dd42jdjybrhzfmkqb3xr9pdrnijg"; depends=[git2r rprojroot rPython]; }; - excursions = derive2 { name="excursions"; version="2.3.3"; sha256="16clwp76hq1q3m7ixjq1rv83vagxyj2fcs4jdsgvl9pzh5syzd3x"; depends=[Matrix sp]; }; + excursions = derive2 { name="excursions"; version="2.4.4"; sha256="140p0vks40vsj1bi89rhdqih5jh7795pxzzqm9140vfiv8b0aya5"; depends=[Matrix sp]; }; exif = derive2 { name="exif"; version="0.1.0"; sha256="12phqn5x1x0xs2xczl3064q983dalm261vqpyafhdcndm1y3gwbc"; depends=[Rcpp]; }; - exifr = derive2 { name="exifr"; version="0.2.1"; sha256="0969ip7vwhs3r9zwy5l1gqg886yl4gfw8ss2frnq9nmqpn1ib1v2"; depends=[curl dplyr jsonlite purrr tibble]; }; + exifr = derive2 { name="exifr"; version="0.2.2"; sha256="1na5d28x2s6lgwydfnhjvkya8kwsf4nh894f1inhzchk7g5cj475"; depends=[curl dplyr jsonlite purrr tibble]; }; + exiftoolr = derive2 { name="exiftoolr"; version="0.1.1"; sha256="0qip3r2vvxj0ax2pf150hmka70yiv9k2vlfj5pxyminri7scvf39"; depends=[curl jsonlite]; }; exp2flux = derive2 { name="exp2flux"; version="0.1"; sha256="1b3ychb4wcf6dbccx2ddms5xygdgc296cnw4474fm81yrfjznplv"; depends=[gage igraph sybil]; }; expandFunctions = derive2 { name="expandFunctions"; version="0.1.0"; sha256="0661l4ab0xhjidmh8ycvymhp3wgxafm7nd1c59bfpxhyhz76n1p4"; depends=[glmnet orthopolynom plyr polynom]; }; expands = derive2 { name="expands"; version="2.1.2"; sha256="15r5wld63kwk3kcl5x09dj0n1mgcl076lcjsmf0vbh10x4n0avrk"; depends=[ape commonsMath flexclust flexmix gplots matlab moments NbClust plyr RColorBrewer rJava]; }; experiment = derive2 { name="experiment"; version="1.1-4"; sha256="08d9m72l6n2ygy5x8aakzv3n71ybqy1i8yzv55f7r4w1kk4pbk5i"; depends=[boot MASS]; }; expert = derive2 { name="expert"; version="1.0-0"; sha256="0y9vcigvzhymalpv31b9nvmr86z1dz7x29yj838vks0dsv23rgrf"; depends=[]; }; expint = derive2 { name="expint"; version="0.1-5"; sha256="12ki8j17p070kq2mdzzai755wy1n6kvinax0ldd63kynij9n0gdh"; depends=[]; }; - explor = derive2 { name="explor"; version="0.3.3"; sha256="1b3swb7ikp2ik3300ljg2rll5gka4l4lfg95bqbgap3ph4dclv7y"; depends=[dplyr DT ggplot2 highr scatterD3 shiny tidyr]; }; + explor = derive2 { name="explor"; version="0.3.4"; sha256="1gdahxglpk7wyf89ixqaqw95rzac4kii2qyxkk3b26hg5chfnd7k"; depends=[dplyr DT ggplot2 highr scatterD3 shiny tidyr]; }; exploreR = derive2 { name="exploreR"; version="0.1"; sha256="154j5wiiy9vqdvh1qvdkz2fdp2phcygbbjl7nj5nkn07xwxbsc77"; depends=[ggplot2]; }; - expm = derive2 { name="expm"; version="0.999-2"; sha256="1mihl67kvv1xv0figp25jkmwfn4iwkcx15cng2348y8gm6zybw9q"; depends=[Matrix]; }; + expm = derive2 { name="expm"; version="0.999-3"; sha256="04k4a6g071jkjc0d30ncmf713dj16brcs9m6pj43hnycc1caq6si"; depends=[Matrix]; }; expoRkit = derive2 { name="expoRkit"; version="0.9.2"; sha256="0qlzz86cyfz2yyynz8bj28086d1pc93gvjy1idip80m7z6vsrsxq"; depends=[Matrix SparseM]; }; expoTree = derive2 { name="expoTree"; version="1.0.1"; sha256="0hj1x4niqp0ghqik3mz733nc3zpnhyknrdpzpj6y2rfia2ysdiz8"; depends=[ape deSolve]; }; expp = derive2 { name="expp"; version="1.2.2"; sha256="0xr24xzplgamj8dkjk9n9jmrbyw056z57hkm9h4j43g63vxrinlj"; depends=[deldir rgeos sp spatstat spdep]; }; - exprso = derive2 { name="exprso"; version="0.3.6"; sha256="0df3c79iscgrdj14d82vibsxz85zb99j55b3r6jw0zqs5czd8rhd"; depends=[cluster e1071 frbs gtools kernlab lattice MASS nnet plyr randomForest ROCR rpart sampling]; }; + exprso = derive2 { name="exprso"; version="0.4.0"; sha256="122bh96hhn2wbwjlrnrb9s9bkfd2wp43vsyr8glxrd47mdvm2i9v"; depends=[cluster e1071 frbs kernlab lattice MASS nnet plyr randomForest ROCR rpart sampling]; }; expsmooth = derive2 { name="expsmooth"; version="2.3"; sha256="0alqg777g7zzbjbg86f00p2jzzlp4zyswpbif7ndd0zr8xis6zdc"; depends=[forecast]; }; expss = derive2 { name="expss"; version="0.8.7"; sha256="1p0jzqbjagx00qwjhsjyvmqijlp33qjhj7k9b8rddibvg9ysmcji"; depends=[data_table foreign htmlTable magrittr matrixStats]; }; exptest = derive2 { name="exptest"; version="1.2"; sha256="0wgjg62rjhnr206hkg5h2923q8dq151wyv54pi369hzy3lp8qrvq"; depends=[]; }; @@ -6287,14 +6568,15 @@ in with self; { extfunnel = derive2 { name="extfunnel"; version="1.3"; sha256="162w5b2wjs3yqy8jisamsapav6swa8sskf1b6x5hglnrv3i4qyyy"; depends=[rmeta]; }; extlasso = derive2 { name="extlasso"; version="0.2"; sha256="05774y0i01lrbyws6zx5ymhcglllv1wc7gzrnyx8i5d1lxdinsyd"; depends=[]; }; extraBinomial = derive2 { name="extraBinomial"; version="2.1"; sha256="0qmvl35f7n78kghszwyaz4wzbswqy4p98c3b6alzrc2ldsq6pq5z"; depends=[]; }; - extraDistr = derive2 { name="extraDistr"; version="1.8.9"; sha256="1fg8vjpal33y51iqzglk1yvy46d7js0l0wfbdy698lq8a06hq19p"; depends=[Rcpp]; }; + extraDistr = derive2 { name="extraDistr"; version="1.8.10"; sha256="00lvqp5bb3iak5myiz4rqm887bkq9sdh7aybmz84mmfni6q01m28"; depends=[Rcpp]; }; extraTrees = derive2 { name="extraTrees"; version="1.0.5"; sha256="1rvvp2p9j8ih8fid1n17606pa23bjg3i2659w1l6w0jkb1p23zcx"; depends=[rJava]; }; - extracat = derive2 { name="extracat"; version="1.7-5"; sha256="1jj3mkn7s0m4dhnbrqhhxx6k2macmjjrmd7v7rqb5wivj5g7b89v"; depends=[colorspace data_table ggplot2 hexbin plyr reshape2 scales TSP]; }; + extracat = derive2 { name="extracat"; version="1.7-6"; sha256="1a4ppfr9lsr1hlbf6m47sm8kflq8rp2khp1vc9xmnr9jxlwz3l2d"; depends=[colorspace data_table ggplot2 hexbin plyr reshape2 scales TSP]; }; extrafont = derive2 { name="extrafont"; version="0.17"; sha256="0b9k2n9sk23bh45hjgnkxpjyvpdrz1hx7kmxvmb4nhlhm1wpsv9g"; depends=[extrafontdb Rttf2pt1]; }; extrafontdb = derive2 { name="extrafontdb"; version="1.0"; sha256="115n42hfvv5h4nn4cfkfmkmn968py4lpy8zd0d6w5yylwpzbm8gs"; depends=[]; }; extremeStat = derive2 { name="extremeStat"; version="1.4.0"; sha256="0fvkvlm47ri05w9h5qa937ijsc5lg51jc825wq9pmn7aiv58yxzm"; depends=[berryFunctions evd evir extRemes fExtremes ismev lmomco pbapply RColorBrewer Renext]; }; extremefit = derive2 { name="extremefit"; version="0.2.3"; sha256="1m2960qbs2qha4975sq5awsvlk10s1mgb3cm91fyrm6lh50plv5m"; depends=[]; }; extremevalues = derive2 { name="extremevalues"; version="2.3.2"; sha256="0pyngxljdnjwnbwcb0gmxcirv70r1s1wyq4m1wm5rprpdj8v9xil"; depends=[gWidgets gWidgetstcltk]; }; + extremis = derive2 { name="extremis"; version="0.90"; sha256="1cnwn70d9swks5b2y915l18gky9v23vaqlaaggshi0ghn3snb4sm"; depends=[emplik]; }; extremogram = derive2 { name="extremogram"; version="1.0.2"; sha256="13k869v6j4ik9p8w0gf1absvb45xbd3nnwghsz0ix7y0vyvry358"; depends=[boot MASS]; }; exuber = derive2 { name="exuber"; version="0.1.0"; sha256="0jm0kxw7f4pzy162alp0q9kxgyrg2qllhxl7ijaq5qx4wnyhab3m"; depends=[doParallel dplyr foreach ggplot2 purrr Rcpp rlang]; }; eyelinker = derive2 { name="eyelinker"; version="0.1"; sha256="1lwpm247czqm26zvv5c6lkhdxpp4svszfw74g9ys9vwvwhry9c15"; depends=[intervals magrittr plyr readr stringi stringr]; }; @@ -6314,7 +6596,7 @@ in with self; { fCertificates = derive2 { name="fCertificates"; version="0.5-4"; sha256="1a49gkzvb83lqqw65lxlaszpicn663hwi9wrbsb3f6z7znylkzaf"; depends=[fBasics fExoticOptions fOptions]; }; fChange = derive2 { name="fChange"; version="0.1.0"; sha256="1pj4q9dsqqgv198kfv410qkpgynhd580bcsigmak598m5jx3rf7l"; depends=[fda lattice reshape2 sandwich sde]; }; fCopulae = derive2 { name="fCopulae"; version="3042.82"; sha256="10wknqrrs5j63v7qnp5qmk85688r36vli4r99i49y2i2nv10yp5r"; depends=[fBasics fMultivar timeDate timeSeries]; }; - fDMA = derive2 { name="fDMA"; version="2.2.3.1"; sha256="0lkidcc9r3psngdn60wk5zk6k32qxgklcrk23jhf88qnrfqbasw4"; depends=[doParallel foreach forecast gplots iterators MSwM png psych Rcpp RcppArmadillo tseries xts zoo]; }; + fDMA = derive2 { name="fDMA"; version="2.2.4"; sha256="0lpp6gyynfziyn5ar3wlq628b5lvw5dhxzw6wr5xwwfaarqf7qfx"; depends=[doParallel foreach forecast gplots iterators itertools MSwM png psych Rcpp RcppArmadillo tseries xts zoo]; }; fExoticOptions = derive2 { name="fExoticOptions"; version="3042.80"; sha256="1b3y7j5ywic6xhsj2afq6y5f5l0npgav854rb87938rjckz95d4h"; depends=[fBasics fOptions timeDate timeSeries]; }; fExpressCertificates = derive2 { name="fExpressCertificates"; version="1.2"; sha256="1r4qkhf7alasbwjz910b0x4dlzm72af06kv7v2vwyzvf3byn21c5"; depends=[fCertificates Matrix mvtnorm tmvtnorm]; }; fExtremes = derive2 { name="fExtremes"; version="3042.82"; sha256="1n0afql4csgsqf7j9x2v8yxncvpknms643l9knm0fqb4pdbaw58c"; depends=[fBasics fGarch timeDate timeSeries]; }; @@ -6330,7 +6612,7 @@ in with self; { fTrading = derive2 { name="fTrading"; version="3042.79"; sha256="0xnfg4npfdrvmp1n6vbsm7if16n5j83b7y1i2m5b34cqnlz9d69y"; depends=[fBasics timeDate timeSeries]; }; fUnitRoots = derive2 { name="fUnitRoots"; version="3042.79"; sha256="1hsv47dm0hx3s04g9h0bjdgi79zbfihnfxxdc2jskqp94yl7azsy"; depends=[fBasics timeDate timeSeries urca]; }; fabCI = derive2 { name="fabCI"; version="0.1"; sha256="123bc56nnx6hcj257imsd8sc6d0pggw08lf4m0lr90631gcm1mkn"; depends=[]; }; - fabricatr = derive2 { name="fabricatr"; version="0.4.0"; sha256="0z04n2n44anpci8m4m5hs83nwhiczil7lkg8glcgngrdh994k8hc"; depends=[rlang]; }; + fabricatr = derive2 { name="fabricatr"; version="0.6.0"; sha256="11vl2gabri7pb2ka7aqq3w7rxsi26qcdyqdhca9jpxm2m0swm2ms"; depends=[rlang]; }; face = derive2 { name="face"; version="0.1-4"; sha256="0kkgblxzhjzifxnym6g5psiwvfgydk1scqbxraldklm8c4a12zc3"; depends=[Matrix matrixcalc mgcv refund]; }; facebook_S4 = derive2 { name="facebook.S4"; version="1.1.0"; sha256="1if3fgyvj6pbf48yjwa5fkn3s4rl6kj9s1nk6dwphykhx72ghzrj"; depends=[httr magrittr plyr rjson]; }; facerec = derive2 { name="facerec"; version="0.1.0"; sha256="1dipcnxjz6yd34w0jrrvj5p0pwdgz1l5m9zvri7mflnz7g34gmaj"; depends=[dplyr httr jsonlite knitr magrittr rlang snakecase stringr]; }; @@ -6346,7 +6628,7 @@ in with self; { fail = derive2 { name="fail"; version="1.3"; sha256="0vfm6kmpmgsamda5p0sl771kbnsscan31l2chzssyw93kwmams7d"; depends=[BBmisc checkmate]; }; faisalconjoint = derive2 { name="faisalconjoint"; version="1.15"; sha256="08sb4za8qyadvigq2z7b0r44qk2lpahpnz9nv16xfjb1zhdkz5w3"; depends=[]; }; fakeR = derive2 { name="fakeR"; version="1.0"; sha256="0f4ngnd8s34j1327zp3aqnsiw0gfxkp1i24ng20hrmfl13s1qmxp"; depends=[mvtnorm polycor pscl VGAM]; }; - fakemake = derive2 { name="fakemake"; version="1.2.0"; sha256="1acd404fl0bc6xsal39vgx4j5jdqa24csn15cmw26yach7dxrm87"; depends=[callr igraph MakefileR withr]; }; + fakemake = derive2 { name="fakemake"; version="1.3.0"; sha256="1w2zrx5imkmcd9aikis2r54k2g9g6l0q7n3d18vjbk02js3f4jv4"; depends=[callr igraph MakefileR withr]; }; falcon = derive2 { name="falcon"; version="0.2"; sha256="09hlvwwj3k3nhcsxijjvv8x74a9m200ayjjplrp4baxvczwyq341"; depends=[]; }; falconx = derive2 { name="falconx"; version="0.2"; sha256="0648mvbc7ga7vr2xqzyln3dgd11h5s4bqhv3p55mj7smr4qv7hv9"; depends=[]; }; fam2r = derive2 { name="fam2r"; version="1.2"; sha256="0pq5cmzwk3s8cz5x8dsfb2d6qfpapkrwbzvkqmqkhcwhwryy40mm"; depends=[Familias paramlink]; }; @@ -6356,16 +6638,17 @@ in with self; { fancycut = derive2 { name="fancycut"; version="0.1.2"; sha256="1xg5qjxf77g10h07x6rvb8c3klc9gbr77bkw352qpas268pkswl2"; depends=[]; }; fanovaGraph = derive2 { name="fanovaGraph"; version="1.4.8"; sha256="1da7yskh2gn4arrrnalkl3izqyyrm0yf0il4v2izs7di7qlw3m6v"; depends=[DiceKriging igraph sensitivity]; }; fanplot = derive2 { name="fanplot"; version="3.4.1"; sha256="1xj1hdz3i9c9wdx7ryiqag69khh3544v4474ilxxiyahxg2r6m45"; depends=[]; }; - fansi = derive2 { name="fansi"; version="0.2.3"; sha256="1jcnzl8qdav5niv52xa1r8jp5c4wsnhsddjlnrc2ss76pzwgwvfv"; depends=[]; }; + fansi = derive2 { name="fansi"; version="0.4.0"; sha256="02f2rx7v7wz6w97m2slwky2i5y8f9iafycmkyr3siy3z3k8fj171"; depends=[]; }; faoutlier = derive2 { name="faoutlier"; version="0.7.2"; sha256="0h2azbkxpz03qjmq558mh7dkpv87vbvminvg69wqsx21m6hdl5r3"; depends=[lattice lavaan MASS mirt mvtnorm pbapply sem]; }; far = derive2 { name="far"; version="0.6-5"; sha256="18lj2mgnn9s59ypkr19zzv0sffwpx9mgk975xmpvw4kkl84dykis"; depends=[nlme]; }; faraway = derive2 { name="faraway"; version="1.0.7"; sha256="0lalf52y9rb4zdb4kpscwddb4zy0af7r5sm7lx8s9jaqykrwrfq6"; depends=[lme4 nlme]; }; farff = derive2 { name="farff"; version="1.0"; sha256="1w3mi0vsw7mpqznaf3rnzf7va7ax07n5rrpm2hnjh0q25lsv55hk"; depends=[BBmisc checkmate readr stringi]; }; + farver = derive2 { name="farver"; version="1.0"; sha256="18r98j9n2l6zjjx6gqvrjj6j19r52k0mrn72p4vyy97ag8fs8hb1"; depends=[Rcpp]; }; fasjem = derive2 { name="fasjem"; version="1.1.2"; sha256="1bbrcyyg96hakgla3604byrkn9034197vy2is048kdq20yr2y11n"; depends=[igraph]; }; fast = derive2 { name="fast"; version="0.64"; sha256="098rk6kszdx3szcwvwzcv7zlcd6qvqvbqch7q8ilas6vbki81ba4"; depends=[zoo]; }; fastAdaboost = derive2 { name="fastAdaboost"; version="1.0.0"; sha256="1pv1y6znvc37pgwk99v4r0hljhipq8v6r3r5cb5vhgyl0bfi8g38"; depends=[Rcpp rpart]; }; fastDummies = derive2 { name="fastDummies"; version="1.2.0"; sha256="0w7764b64isvlimly06i46hk1rspd3bjrqi2f2gafcwz5lk2jc3s"; depends=[data_table tibble]; }; - fastGHQuad = derive2 { name="fastGHQuad"; version="0.2"; sha256="0yv3wdyj7hs1gr3rq08k520v0ldmv5zzng709xjx2kchhwhmy8ah"; depends=[Rcpp]; }; + fastGHQuad = derive2 { name="fastGHQuad"; version="1.0"; sha256="1rjia8wggadr9xwxcmzmal0rc4g6pa3dr5888fbbnb6abl8b2lrj"; depends=[Rcpp]; }; fastGraph = derive2 { name="fastGraph"; version="1.1"; sha256="1vbi5yssnh8hcbmrq1r437vpvj8hqd3vc8wmcy0nbyvnmyjaxkvb"; depends=[]; }; fastHICA = derive2 { name="fastHICA"; version="1.0.2"; sha256="1h794ybbii0k7v3x0r1499zxdqa1i1dpi3i7idzqdrffnb5kmwlv"; depends=[energy fastICA]; }; fastICA = derive2 { name="fastICA"; version="1.2-1"; sha256="108z2ymby5y4h8l4l2krqwm28rya93gq09yylgilnm3afvfrfabg"; depends=[]; }; @@ -6373,7 +6656,7 @@ in with self; { fastLink = derive2 { name="fastLink"; version="0.4.0"; sha256="0cqrg6fj7ylxf5brwmdsv7wrak8b395yszdy1cz3q87r3ayi02cq"; depends=[adagio data_table doParallel dplyr FactoClass foreach gtools Matrix plotrix Rcpp RcppArmadillo RcppEigen stringdist stringi stringr]; }; fastM = derive2 { name="fastM"; version="0.0-4"; sha256="1n9a431w0hl4kr3pa32kcyd1d73acz4vb9vhfkckk3099mg46d9m"; depends=[Rcpp RcppArmadillo]; }; fastR = derive2 { name="fastR"; version="0.10.3"; sha256="1sz6krxiamq3rp4h9ah2b1zvyyrlvsn7lpvrjv1xda2c1kqqkvmk"; depends=[lattice mosaic mosaicCalc mosaicData]; }; - fastR2 = derive2 { name="fastR2"; version="1.1.0"; sha256="145gkz777zx80bxx1zwwj4diswl6yf2v02wgfpy3rvk2q225f1id"; depends=[dplyr ggplot2 lattice maxLik miscTools mosaic numDeriv]; }; + fastR2 = derive2 { name="fastR2"; version="1.2.1"; sha256="15mqsdy79zvd4srrszdjp0kh9lfcq3yxp7j5d4xcqbjbwsgy68il"; depends=[dplyr ggplot2 lattice maxLik miscTools mosaic numDeriv]; }; fastSOM = derive2 { name="fastSOM"; version="1.0.0"; sha256="1x4kxys7mxlxz7cfbjig44za8m8p19xgzcs5y2wn9320sx8b0wc0"; depends=[]; }; fastTextR = derive2 { name="fastTextR"; version="1.0"; sha256="0l0f9jvsa68a3vd6mwbhsqd12729nd6nwsnlzrhsg9wj9rx8kpmi"; depends=[Rcpp]; }; fasta = derive2 { name="fasta"; version="0.1.0"; sha256="0wnppxn3039dj58xm0b66fsyq537bk8k8m56im11xj1iwc3zc6vw"; depends=[]; }; @@ -6382,11 +6665,12 @@ in with self; { fastcmh = derive2 { name="fastcmh"; version="0.2.7"; sha256="0hib3r3pkfdi67bdy4pf1pw6869vq4b3pg1pq1zwpyy76nbnq9vl"; depends=[bindata Rcpp]; }; fastcox = derive2 { name="fastcox"; version="1.1.3"; sha256="0jn19v6mkwgyz8x63xrfgkgnf0f2rq338r5qkhz690mdzr4c47a3"; depends=[Matrix]; }; fastdigest = derive2 { name="fastdigest"; version="0.6-3"; sha256="02csl261v7nassi5119ygw6jglm8q6rssg7lgyxzj73mkyilm832"; depends=[]; }; + fasterElasticNet = derive2 { name="fasterElasticNet"; version="1.1.2"; sha256="1hr0wc6s6zpq1hkfgshf0dqjxb7s2849bb8lb04nmi6p42r3628g"; depends=[Rcpp RcppArmadillo]; }; fasteraster = derive2 { name="fasteraster"; version="1.1.1"; sha256="1ycr2h046jds2758xvxn00rhglx3zarbzn3r38j66j5pnz2iiq4f"; depends=[Rcpp]; }; fasterize = derive2 { name="fasterize"; version="1.0.0"; sha256="0q8n1r5n06yr6vmnwrdajx8923646bzm7ywgn2f0zxl214plf56s"; depends=[raster Rcpp RcppArmadillo sp]; }; fastmaRching = derive2 { name="fastmaRching"; version="1.1.0"; sha256="085xr5i6h6vwl1flzbkwqsm8d815s0p02p0mir60jqjvy0s7haip"; depends=[raster rgdal sp]; }; fastmatch = derive2 { name="fastmatch"; version="1.1-0"; sha256="0z80jxkygmzn11sq0c2iz357s9bpki548lg926g85gldhfj1md90"; depends=[]; }; - fastnet = derive2 { name="fastnet"; version="0.1.5"; sha256="0l14ahrk4p5ils5rqwkj25f7xxhjqxpibgcy942c6pyc33rbsbcl"; depends=[doParallel foreach igraph tidygraph]; }; + fastnet = derive2 { name="fastnet"; version="0.1.6"; sha256="16jdwvk1xhl6bn9fx5s8pzvbizx6c0jmg6arqf201a7ghw2wi4xh"; depends=[doParallel foreach igraph tidygraph]; }; fastpseudo = derive2 { name="fastpseudo"; version="0.1"; sha256="0paag4pjh3gs270j663bsl65sfrq43gk2zzqmalr03fmcckp6aaj"; depends=[]; }; fastqcr = derive2 { name="fastqcr"; version="0.1.0"; sha256="0hzlp66as7k0bh3biqkngacpkq1hi3y3gp6wg4c5476ywzm83gra"; depends=[dplyr ggplot2 gridExtra magrittr readr rmarkdown rvest scales tibble tidyr xml2]; }; fastrtext = derive2 { name="fastrtext"; version="0.2.5"; sha256="0zbd2sxzarxic90d2pkbn7fak5gyb81b180m91f784smb3sx1p1j"; depends=[assertthat Rcpp]; }; @@ -6399,13 +6683,14 @@ in with self; { fbar = derive2 { name="fbar"; version="0.4.3"; sha256="1raq8ak01gcnmcsaa3fdfqi40d67v7nfjr212jzvq7wp2qk3j10i"; depends=[assertthat dplyr magrittr Matrix purrr rlang ROI ROI_plugin_ecos stringr tibble tidyr]; }; fbati = derive2 { name="fbati"; version="1.0-3"; sha256="03a48sndphxrm4bmk0qx0lxnk4akkdpbvldq9dcnf9hxxmrfivh4"; depends=[fgui pbatR rootSolve]; }; fbroc = derive2 { name="fbroc"; version="0.4.0"; sha256="0bxi027iqqn50mn5nrlgx3z4qdlfkrq88s0dqyaxdl8rsrwp3d2w"; depends=[ggplot2 Rcpp]; }; + fc = derive2 { name="fc"; version="0.1.0"; sha256="0x41xfchy499kz0qi7fp12vpkbcddprv19mmk48lxzavv4f5avfh"; depends=[codetools]; }; fcd = derive2 { name="fcd"; version="0.1"; sha256="091wbf5iskcgyr7jv58wrf590qijb0qcpninmvm3xrwxi34r37xr"; depends=[combinat glmnet MASS]; }; - fclust = derive2 { name="fclust"; version="1.1.3"; sha256="1wpdvpfama90x8rj5yv54q7k318ad4y6pi33vsyh0rsb3fdrkqkr"; depends=[]; }; + fclust = derive2 { name="fclust"; version="2.0.2"; sha256="032iqrnsbs2ckhlxw9gnsqxpxj38hqnrlq46k11rvyf5zlpnci99"; depends=[MASS Rcpp RcppArmadillo]; }; fcm = derive2 { name="fcm"; version="0.1.3"; sha256="1mqk6szczsixdvw0inkypij4cw2syng5l5ccw0xk55kc21l1lzn0"; depends=[ggplot2 reshape2]; }; fcr = derive2 { name="fcr"; version="1.0"; sha256="17jrz5zp1msd2khl1lwnb5sgxcigagni556rhn7qm9g0aykbh8yj"; depends=[face fields mgcv]; }; fcros = derive2 { name="fcros"; version="1.5.6"; sha256="0n1zbzl6g9k3smdpgyb3xsa2w8ir4bdagv7w644x1jck5rd0xn2j"; depends=[]; }; fcuk = derive2 { name="fcuk"; version="0.1.21"; sha256="1sb7p1m5qb88028mrw95lhh8l7dxj696hjh88nfsdpnscryknfpv"; depends=[magrittr purrr stringdist tibble]; }; - fdANOVA = derive2 { name="fdANOVA"; version="0.1.1"; sha256="16i0mnbxyjbw06havl277c6vi7mq5rak9cjzp8c2zvr8cakalkg4"; depends=[doBy doParallel fda foreach ggplot2 magic MASS]; }; + fdANOVA = derive2 { name="fdANOVA"; version="0.1.2"; sha256="1pycq5a4czqzi8wcfmlc9ncg827j7n0qxyj90wcv39nbcrnl3da1"; depends=[doBy doParallel fda foreach ggplot2 magic MASS]; }; fda = derive2 { name="fda"; version="2.4.8"; sha256="0n39rzbhg1hipzn51rzmbchn2358qgapg08iv7lmiqj5y7i9qns2"; depends=[Matrix]; }; fda_usc = derive2 { name="fda.usc"; version="1.4.0"; sha256="0gp19c5lxp0g4690vdr0gpw89rl9v3l6872mf7hr8nsyyd6776vn"; depends=[fda MASS mgcv nlme rpart]; }; fdaMixed = derive2 { name="fdaMixed"; version="0.5"; sha256="1k2b3z2jj37j6njvxalg8640zlcvi1cm7wkcwp0pia21wydz75ip"; depends=[Formula Rcpp RcppArmadillo]; }; @@ -6416,7 +6701,6 @@ in with self; { fdasrvf = derive2 { name="fdasrvf"; version="1.8.3"; sha256="1lqyadg17ddd3vksbaxc7bpwvk0afsd59rfg0n5wrgvhbd473s0y"; depends=[coda doParallel fields foreach matrixcalc mvtnorm Rcpp RcppArmadillo testthat viridisLite]; }; fdatest = derive2 { name="fdatest"; version="2.1"; sha256="0zdnmssir5jz2kbfz4f4xshjfv4pivqx7cbh2arlx6ypkjrjws8n"; depends=[fda]; }; fdcov = derive2 { name="fdcov"; version="1.1.0"; sha256="0savsgcifcjjqrmbpn6m30gncq5iigqxpb19l710wlx8nm98svjh"; depends=[corrplot matlab]; }; - fdq = derive2 { name="fdq"; version="0.2"; sha256="1iyplxm6niywfhmdnliy9nvvax1w6sijar8gpsj853cdfvn6kz5m"; depends=[data_table Fgmutils ggplot2 plyr randomcoloR sqldf]; }; fdrDiscreteNull = derive2 { name="fdrDiscreteNull"; version="1.3"; sha256="17nzqy4i1c5kcqyps52827q5apyjn4znb1ql4qvfm8v2m1fvily3"; depends=[MCMCpack qvalue]; }; fdrci = derive2 { name="fdrci"; version="2.1"; sha256="1sgrsmlz7sbr1maw3qnpzqz3z75fh5nyiibpsq8j0y12xac8d0x3"; depends=[]; }; fdrtool = derive2 { name="fdrtool"; version="1.2.15"; sha256="1h46frlk7d9f4qx0bg6p55nrm9wwwz2sv6d1nz7061wdfsm69yb5"; depends=[]; }; @@ -6431,14 +6715,15 @@ in with self; { fecR = derive2 { name="fecR"; version="0.0.2"; sha256="1p4166cxajapm158aqbz9p7m8c8dqga1infl6y6wazjnayaib3cb"; depends=[lubridate plyr]; }; fechner = derive2 { name="fechner"; version="1.0-3"; sha256="0bassigcipwlr2g8cdjh8jyhmb903k3hla9gnigcbz7qwzlfwa86"; depends=[]; }; federalregister = derive2 { name="federalregister"; version="0.2.0"; sha256="0qr8nd3ylnwcv1wxspw5i7ray5sh30zr648spg0lpqq8dp2b8p7b"; depends=[curl httr jsonlite]; }; + fedregs = derive2 { name="fedregs"; version="0.1.0"; sha256="1ydkw1090n8kw26d89wrzs86xq47mahdj41pgf8x1m292xcffvjm"; depends=[dplyr httr magrittr purrr rvest stringi tidytext xml2]; }; fedreporter = derive2 { name="fedreporter"; version="0.2.1"; sha256="18hs358iyxmbh28jy9f65zvanpr6bk4gq75qbj255y1zzdsjr9x1"; depends=[httr jsonlite]; }; feedeR = derive2 { name="feedeR"; version="0.0.7"; sha256="08mnfi96qkr1fj53ywqmya957swcwrfd3hqk0qaf2ni96sxxnp98"; depends=[digest dplyr lubridate RCurl XML]; }; fence = derive2 { name="fence"; version="1.0"; sha256="18l3fliww60d9n9hbfdny5vr9mi78krwpjj5sypdsb77d6332h9q"; depends=[fields ggplot2 lme4 MASS sae snow snowfall]; }; - fergm = derive2 { name="fergm"; version="0.2.1"; sha256="14asdvr98nh6rayqff9xda54w95bjg4g2f72a21rhyc932d7589g"; depends=[ergm extrafont ggplot2 matrixStats network reshape2 rstan statnet stringr]; }; + fergm = derive2 { name="fergm"; version="1.1.4"; sha256="1d979z2m5f13i1w9d8kh9rnaafavsap169w0nycpd5j2f3dfhyn7"; depends=[ergm extrafont ggplot2 matrixStats network reshape2 rstan]; }; fermicatsR = derive2 { name="fermicatsR"; version="1.4"; sha256="1587f67fypj22rdi1319zq765lcc9z518bzl1jr4lz6c8lrzfm9i"; depends=[]; }; fetchR = derive2 { name="fetchR"; version="2.1-1"; sha256="0i5k40i7ryfbk1l4nn0k5hnmzhhp6970ns1j82hnih7kmdl4rlwj"; depends=[plotKML rgdal rgeos sp]; }; ff = derive2 { name="ff"; version="2.2-14"; sha256="1w724q4jpzbvzpilb2ifviaxkjgk9lzwxz9gksnvicbmfa20fqqw"; depends=[bit]; }; - ffbase = derive2 { name="ffbase"; version="0.12.3"; sha256="1nz97bndxxkzp8rq6va8ff5ky9vkaib1jybm6j852awwb3n9had5"; depends=[bit fastmatch ff]; }; + ffbase = derive2 { name="ffbase"; version="0.12.5"; sha256="1h5x6rbb1nrpzf4ywkizn8ij0bz3mlz46byh46ylxhicg1ribi24"; depends=[bit fastmatch ff]; }; ffmanova = derive2 { name="ffmanova"; version="0.2-2"; sha256="0sw8br73mx552m4b5zi4qgjcrwxflmgsnvs4mlnxh8g2gaf5bx4j"; depends=[]; }; ffstream = derive2 { name="ffstream"; version="0.1.6"; sha256="036ikhah4y85khgfmvxwsn3vavvw1is8i9k2lw474wxlh4cxa3kd"; depends=[Rcpp]; }; fftw = derive2 { name="fftw"; version="1.0-4"; sha256="0172kpxzjx8239r2jbcqqbpcpqygrxk36a2kmh00f73mrq0kjhc0"; depends=[]; }; @@ -6447,28 +6732,30 @@ in with self; { fgof = derive2 { name="fgof"; version="0.2-1"; sha256="0bclkb3as0fl2gyggqxczndfyj9pfnni5pa3inpn5msrnjg4g2j2"; depends=[mvtnorm numDeriv]; }; fgpt = derive2 { name="fgpt"; version="2.3"; sha256="1d0qzsn4b68jhk07k97iv765jpmzzh1gwqpid0r76vg4cwqfs3n7"; depends=[]; }; fgui = derive2 { name="fgui"; version="1.0-8"; sha256="024fzd1c7iwqprn26hwjb9l2qlvvyzl449d7iixy0x69djwsrysv"; depends=[]; }; + fieldRS = derive2 { name="fieldRS"; version="0.1.1"; sha256="1zyi1qnyn9wi2rcf1d512dyrlkws2adp2wamzbrcbcgv8l4kysz7"; depends=[caret ggplot2 raster rgeos sp spatialEco]; }; fields = derive2 { name="fields"; version="9.6"; sha256="1v7z48a8jmdcil28rj8c3455k6rssr5v9qi6dyhhpbb193bj8121"; depends=[maps spam]; }; - fiery = derive2 { name="fiery"; version="1.1.0"; sha256="0251vfr7b8r4xjgcf8gyh1ddj0lj73fl0pim0k3vpzva5wmwigs1"; depends=[assertthat crayon desc future glue httpuv later R6 reqres stringi uuid]; }; - fiftystater = derive2 { name="fiftystater"; version="1.0.1"; sha256="1nri9vsqif03xrmm3g5llasqm49hj169mgv046f2l0mh9vp0fqpc"; depends=[]; }; + fiery = derive2 { name="fiery"; version="1.1.1"; sha256="07cfrzajr5knmz5ngczkdd2kzjfdnn1y4b0z73daxwhk4dq8j6ji"; depends=[assertthat crayon future glue httpuv later R6 reqres stringi uuid]; }; filehash = derive2 { name="filehash"; version="2.4-1"; sha256="1x7an7rsy5pz2qr86m511rsv297vacxwk3y1a71754yq739qgq6h"; depends=[]; }; filehashSQLite = derive2 { name="filehashSQLite"; version="0.2-4"; sha256="1higvkmj4wvnwpvayqinzaygiksij20d77dx118q0gffsczadamh"; depends=[DBI filehash RSQLite]; }; - filelock = derive2 { name="filelock"; version="1.0.1"; sha256="11mmq296zg62gnxjk7dyr866kihihmsjpfg6bcc7hv6ivh4812nn"; depends=[]; }; + filelock = derive2 { name="filelock"; version="1.0.2"; sha256="00ql5fw1hidpfnm0szaavf43ahmsnvdbi8i5lr1nrcc90yaiaadc"; depends=[]; }; filematrix = derive2 { name="filematrix"; version="1.3"; sha256="1v3aj1ng742msb0sfdnjsbqb508mqjf8jlq2v33vxldhradw5w0b"; depends=[]; }; filenamer = derive2 { name="filenamer"; version="0.2.3"; sha256="19gavhh5q7dziv0yc000w06qp58wk2cm52cxjl33p1q4cjk6gg3m"; depends=[]; }; fileplyr = derive2 { name="fileplyr"; version="0.2.0"; sha256="15rxls0njd6j2vxdahf4fx2nxmsa3rc41812v3wlaqas99naaxxr"; depends=[assertthat datadr tibble]; }; files = derive2 { name="files"; version="0.0.1"; sha256="1vhhawqjjbb6fadkn3l10mvz63w3vmcwvl93fk0q9mhkifzlj9kc"; depends=[]; }; - filesstrings = derive2 { name="filesstrings"; version="2.5.0"; sha256="04axsnk1912h1i6b2qp9cxxs5jd1vkwgxzg2kjw43gnm36a7188w"; depends=[checkmate magrittr matrixStats ore purrr Rcpp rlang stringr tibble]; }; - filling = derive2 { name="filling"; version="0.1.0"; sha256="0avlfl06nd8wn76ydii09ng2fqp92d4n9v2y5vg16m3my58l0srd"; depends=[CVXR nabor Rcpp RcppArmadillo Rdpack ROptSpace RSpectra]; }; - finalfit = derive2 { name="finalfit"; version="0.7.8"; sha256="1jkmagr512h5vvlqyszi6zihpzbmam571bgks5js0d3wbhjs9j38"; depends=[ggplot2 gridExtra Hmisc lme4 magrittr mice plyr pROC scales stringr survival survminer]; }; + filesstrings = derive2 { name="filesstrings"; version="2.7.0"; sha256="02v565in9sw1j01wyqmi3y42l1rgqqrkmfis808nh2lsgf6l1a0f"; depends=[checkmate magrittr matrixStats ore purrr Rcpp rlang strex stringr tibble]; }; + filling = derive2 { name="filling"; version="0.2.0"; sha256="0yxixwgvn7jq09j4r3q33mmdda9a4anfi7y0xqscbdjz6p9bx48w"; depends=[CVXR nabor Rcpp RcppArmadillo Rdpack ROptSpace RSpectra]; }; + finalfit = derive2 { name="finalfit"; version="0.8.7"; sha256="1xs5q8hfvs84qjkgrbsi6xxlj1bycrnrryqfbr7306l42lp1k7mf"; depends=[boot broom dplyr forcats GGally ggplot2 gridExtra Hmisc lme4 mice plyr pROC purrr scales stringr survival survminer tidyr]; }; finch = derive2 { name="finch"; version="0.2.0"; sha256="1vganbkz2d96xfz2jf1q0kqarc575w3nswss2igynsbbd0y53mjm"; depends=[data_table digest EML hoardr plyr rappdirs xml2]; }; findR = derive2 { name="findR"; version="0.2.1"; sha256="1a7cf6kd7i2l4ffr2b17nb9xnpsjhf6fcwpjy06r0qgcapnfp54b"; depends=[pdftools stringr]; }; findpython = derive2 { name="findpython"; version="1.0.3"; sha256="1y08jk2ffmkf9zpwiz2xymjhfwqvls9vzsnq62v278ghw9d571jl"; depends=[]; }; findviews = derive2 { name="findviews"; version="0.1.3"; sha256="1l1yhw5hvrn0rpkdsch8m69d2q5284jwccvv7r4ia4m0iqjfipj7"; depends=[ggplot2 gridExtra scales shiny]; }; - fingerPro = derive2 { name="fingerPro"; version="1.0"; sha256="17r23x8cdllr8slk56dsmrwc4ns69b3cqy59mxxbsjnhjl3di6x8"; depends=[car GGally ggplot2 gridExtra klaR MASS plyr Rcmdr Rcpp RcppGSL reshape rgl scales]; }; + fingerPro = derive2 { name="fingerPro"; version="1.1"; sha256="1a1lj8gyrbgcg8hr03cj2bjzlaafddspri7abc83ys1raqwd4j68"; depends=[car GGally ggplot2 gridExtra klaR MASS plyr Rcmdr Rcpp RcppGSL RcppProgress reshape rgl scales]; }; fingerprint = derive2 { name="fingerprint"; version="3.5.7"; sha256="04jcwkydjrs31pia6kq8z2n9s54im950q08hs2ay15xjxxkmb8ic"; depends=[]; }; - fingertipsR = derive2 { name="fingertipsR"; version="0.1.8"; sha256="168z59y2mqz53qhzavzynh6y11d453dd6j5928ahg6x24hjz6d4w"; depends=[curl dplyr DT httr jsonlite miniUI purrr readr shiny shinycssloaders]; }; + fingertipsR = derive2 { name="fingertipsR"; version="0.1.9"; sha256="1sg2rsk41nxvwy7brikh685gqg5i5d9x2jralgap69qcpmy30gpv"; depends=[curl dplyr DT httr jsonlite miniUI purrr readr shiny shinycssloaders]; }; + fingertipscharts = derive2 { name="fingertipscharts"; version="0.0.2"; sha256="12izvrmjdwy212zxgl54cbry53fv351g3vxmjw5vimqmdd991fxw"; depends=[dplyr fingertipsR geojsonio ggplot2 leaflet lemon mapproj purrr rlang scales sf stringr tibble tidyr]; }; finiteruinprob = derive2 { name="finiteruinprob"; version="0.6"; sha256="0z4l0crymh58chxniqq70fqmvi6f5jkgvz72vbc7s3l9lrrapgr3"; depends=[numDeriv sdprisk]; }; finreportr = derive2 { name="finreportr"; version="1.0.1"; sha256="1mansiyl4p4zqc1h2aw9zgzb3fy4mppgmshdm8mcf4nbm340g4vk"; depends=[curl dplyr httr rvest XBRL xml2]; }; + firebehavioR = derive2 { name="firebehavioR"; version="0.1.1"; sha256="1hf7j9nqqa2i92y73c1yniw6lgmjrl8fag9r4xnkd8vpiw453ck4"; depends=[ggplot2]; }; fishMod = derive2 { name="fishMod"; version="0.29"; sha256="0pbs4z27vwa3c42xdw3mr6l2i581bgvn2pk52kawbcnnlsff92ar"; depends=[]; }; fishdata = derive2 { name="fishdata"; version="0.1.3"; sha256="04162m1j570cdwhffkwjs1x1qlsc20djj1jwx2hl2cqmbp584ppq"; depends=[]; }; fisheyeR = derive2 { name="fisheyeR"; version="0.9"; sha256="1w6va7gakqq2q8hsvdszpn8s2ysdfc648bk5p5v3wbl5s403bci8"; depends=[tkrplot]; }; @@ -6478,18 +6765,18 @@ in with self; { fit_models = derive2 { name="fit.models"; version="0.5-14"; sha256="0vjbzmx0ambm6yzidb4vbgmhclwzwv2iz2cwl54ccdkvx4cx3fck"; depends=[lattice]; }; fit4NM = derive2 { name="fit4NM"; version="3.3.3"; sha256="0k2194521yby6xxi77bpjp6ywz8kpnzws217m7n0hw6xwz5mqj1g"; depends=[cairoDevice gWidgets gWidgetsRGtk2 RGtk2 tkrplot]; }; fitDRC = derive2 { name="fitDRC"; version="1.1.1"; sha256="09z9l27iwl0fd3zy6rsdhmy8qbm5d9a4wcaj5rxp7ynlnpi102aa"; depends=[]; }; - fitODBOD = derive2 { name="fitODBOD"; version="1.1.0"; sha256="15ylldlq12mrw06pzww54hsl8nb9krs5w1cgh037km9sndsswvji"; depends=[hypergeo]; }; + fitODBOD = derive2 { name="fitODBOD"; version="1.2.0"; sha256="00wdpvccb1xf69ry5x9aqwiid4srpibpl640fbn1xxy3gcr5vpwn"; depends=[hypergeo]; }; fitPoly = derive2 { name="fitPoly"; version="3.0.0"; sha256="0ws1vsh8if9i9i7820ak32b0bysjc0z09nbrk17qpms0b11cpc3g"; depends=[foreach]; }; fitTetra = derive2 { name="fitTetra"; version="1.0"; sha256="0ia6wk4gicpmn6kclsd28p7v1npwfv2blagiz0cxzwfw3njv103g"; depends=[]; }; fitbitScraper = derive2 { name="fitbitScraper"; version="0.1.8"; sha256="0b4d7xw6inp6l1dkfwyrzxwg4vspp4vzlwrhv14ajxrqz6irj8a0"; depends=[httr jsonlite stringr]; }; fitdc = derive2 { name="fitdc"; version="0.0.1"; sha256="1b1abib7jkl7a6r686r53qjw2ywb9q2h67is8691kkaqxpawg30p"; depends=[]; }; - fitdistrplus = derive2 { name="fitdistrplus"; version="1.0-9"; sha256="18x9454g598d54763k3hvi33iszifk7sxvhd1zg5r8z1vpixx3z6"; depends=[MASS survival]; }; + fitdistrplus = derive2 { name="fitdistrplus"; version="1.0-11"; sha256="12hckg3y5j3zh9q1gwxkc27q813p2r42iqp7wdfiq6nj55jrh6w6"; depends=[MASS npsurv survival]; }; fitplc = derive2 { name="fitplc"; version="1.1-7"; sha256="1dffgqsml6cj6ayqdpr0330kj8v57jwi3pgchb8v98rainygsyfw"; depends=[car nlme]; }; fitteR = derive2 { name="fitteR"; version="0.1.0"; sha256="1kgnyl7am966vkfap8gmvchlpankrcj5dv5aj7ws8ix9shr76db6"; depends=[dplyr DT maxLik R_utils shiny]; }; - fitur = derive2 { name="fitur"; version="0.5.25"; sha256="0f33c4mg0257s9c0qldryihaq8p3y07j2nwghjpqhi3rv4mrg2xf"; depends=[actuar e1071 fitdistrplus ggplot2]; }; + fitur = derive2 { name="fitur"; version="0.6.1"; sha256="04lr717lsbb4731nlzgscraj30knik4q68jzrl4i5f27912159r9"; depends=[actuar DT e1071 fitdistrplus ggplot2 goftest miniUI rstudioapi shiny]; }; fivethirtyeight = derive2 { name="fivethirtyeight"; version="0.4.0"; sha256="1sdj5b365hi11dd2yxvg9w3fz3rx9rbv1nnhf5i8v2ydg4kqyrws"; depends=[]; }; fixedTimeEvents = derive2 { name="fixedTimeEvents"; version="1.0"; sha256="0z7ji8yzp4pj76ad64l7ivknkbi82ijx6abd3a18wicqhrh433sj"; depends=[]; }; - fixerapi = derive2 { name="fixerapi"; version="0.1.5"; sha256="0mp492n75wh8ws85gh5q9bbq709a78z14pipc8vjxk0fizhxwwdc"; depends=[jsonlite tibble tidyr]; }; + fixerapi = derive2 { name="fixerapi"; version="0.1.6"; sha256="0ikf8dn0l9c9gshp4bph3wasl0bh6lfybinc8n1rvb202231hmgb"; depends=[jsonlite tibble tidyr]; }; fizzbuzzR = derive2 { name="fizzbuzzR"; version="0.1.1"; sha256="119gbi9y4n8r52hk9vj7zf795dv9xnk7lnngljjcd7ydnhygwd4h"; depends=[]; }; flacco = derive2 { name="flacco"; version="1.7"; sha256="1w77smmbrwglayr2rj88b00x7wan9f3x1fq8h6xyhybfvrw7vr0r"; depends=[BBmisc checkmate mlr]; }; flam = derive2 { name="flam"; version="3.2"; sha256="0v6kcl4n7wq052p7jdgbzlh9fpk8bzlrqw12i6pib1wd3slj0asa"; depends=[MASS Rcpp]; }; @@ -6498,22 +6785,22 @@ in with self; { flars = derive2 { name="flars"; version="1.0"; sha256="06qma1ar1nj7n6g9alk1qydm5bkj6lsjx0pqkikxpb41d91civqk"; depends=[fda MASS Matrix Rcpp RcppEigen]; }; flashClust = derive2 { name="flashClust"; version="1.01-2"; sha256="0l4lpz451ll7f7lfxmb7ds24ppzhfg1c3ypvydglcc35p2dq99s8"; depends=[]; }; flatr = derive2 { name="flatr"; version="0.1.1"; sha256="10l98a3f57wahfpdqxj70r25zfhk4vzzd014pdnriy458yrfd7rw"; depends=[dplyr magrittr tibble]; }; - flatxml = derive2 { name="flatxml"; version="0.0.1"; sha256="0rg6khx6sgxhmvh3j8m1ady8bya2904n3maynb7393rp9s8jvb9p"; depends=[RCurl xml2]; }; - flexCWM = derive2 { name="flexCWM"; version="1.8"; sha256="0x6rmag3gdlph1xd1xbnfxxzl4rmp4z7zsvagbcwbri21ia29s14"; depends=[ContaminatedMixt mclust numDeriv statmod]; }; + flatxml = derive2 { name="flatxml"; version="0.0.2"; sha256="1f7pc3chzimkg23490qvppy63sk4ds3aaahc36sa4dc4qmhabyms"; depends=[RCurl xml2]; }; + flexCWM = derive2 { name="flexCWM"; version="1.9"; sha256="02afmg7d008mfgja7pqxk0fdgmgqk9vq7xy13ijancg6fm3x8prk"; depends=[ContaminatedMixt mclust numDeriv statmod]; }; flexPM = derive2 { name="flexPM"; version="2.0"; sha256="0h3qs9w9pc2nc24q1diz7j3s93y40ijpmgq2l0xg9mzcgjz9kz8c"; depends=[survival]; }; - flexclust = derive2 { name="flexclust"; version="1.3-5"; sha256="19ihdhmhaglccqpvrpc51367gkfafg4jdpabbk0j6mh2n16hi511"; depends=[lattice modeltools]; }; + flexclust = derive2 { name="flexclust"; version="1.4-0"; sha256="0x7wxk8y46ndyz6fdacym0rd6p9wh3pcfr28chjcg5d7fm849zl2"; depends=[class lattice modeltools]; }; flexdashboard = derive2 { name="flexdashboard"; version="0.5.1.1"; sha256="0fy3nbrr67zqgd44r2mc850s5sp0hzfcw3zqs15m8kxzj1aw067x"; depends=[htmltools htmlwidgets jsonlite knitr rmarkdown shiny]; }; flexmet = derive2 { name="flexmet"; version="1.0.0.0"; sha256="0xhr4i46s3k7a4yz2sd1sphn8wz27xcl580s2kqkr1ifg8941kv8"; depends=[]; }; flexmix = derive2 { name="flexmix"; version="2.3-14"; sha256="0sl4zxh1sb2sr5q7svjw9ihrm219jzn82yrc9d43q6r1b8bpyz43"; depends=[lattice modeltools nnet]; }; flexrsurv = derive2 { name="flexrsurv"; version="1.4.1"; sha256="13jq7yk7rz2148wkf7dv28l79zwdf1gpfkd5khgacb8hl5kml3p0"; depends=[Epi formula_tools matrixcalc orthogonalsplinebasis survival]; }; flexsurv = derive2 { name="flexsurv"; version="1.1"; sha256="1vj8zsfgq2rv6v7na4w7n7z3farc69qsavm7pnmnhkaylz61gq26"; depends=[deSolve mstate muhaz mvtnorm quadprog Rcpp survival]; }; flexsurvcure = derive2 { name="flexsurvcure"; version="0.0.2"; sha256="1lhw2z8i4l822ncziwpw6hg0dzc244q60n7l5aahgdhcr0xgylhz"; depends=[flexsurv gtools survival]; }; - flextable = derive2 { name="flextable"; version="0.4.4"; sha256="12f33szyxf4b7ipz4j9sli6miwkjq2309rpinaxmnsqsafd1zn3b"; depends=[gdtools htmltools knitr officer R6 rmarkdown stringr]; }; - flifo = derive2 { name="flifo"; version="0.1.4"; sha256="1yilfnblarimc8mlvvwsgib5sxcfgvgsvgpyzddxb39g6fb7lffs"; depends=[bazar pryr]; }; - flip = derive2 { name="flip"; version="2.4.3"; sha256="04zf2gnk5w57gxnlnh26pn1ir1wfrzxhfhchr33ghk7prhc7k4b8"; depends=[cherry e1071 Rcpp RcppArmadillo someMTP]; }; + flextable = derive2 { name="flextable"; version="0.4.5"; sha256="09j2y0z7rkc0w1cl9pp1cpk6fnzzfr6245mxa3ca42z9k2cy2jfl"; depends=[gdtools htmltools knitr officer R6 rmarkdown stringr xml2]; }; + flifo = derive2 { name="flifo"; version="0.1.5"; sha256="03x66l3ryrjvwbxxd0ncjrb5w9kc7fswmp5psb1cb7r87f395gm3"; depends=[bazar pryr]; }; + flip = derive2 { name="flip"; version="2.5.0"; sha256="08x5hwxaxbgc745gblja7gcy0b5wbp7jf90lkha75zl5cc9iyksl"; depends=[cherry e1071 plyr someMTP]; }; flippant = derive2 { name="flippant"; version="1.1.0"; sha256="06aj90y7c33c1q0nw1c67vr1pfmp9fw78az6ivrbq110f2k1m12w"; depends=[assertive_files assertive_numbers assertive_properties assertive_strings assertive_types data_table ggplot2 magrittr minpack_lm plyr RcppRoll stringi withr wmtsa]; }; - flipscores = derive2 { name="flipscores"; version="0.1"; sha256="0jb9im2p3x20y356av749mni3cka2byhv7glz7qhdmsdryrdizh7"; depends=[]; }; - float = derive2 { name="float"; version="0.1-1"; sha256="0bzwc48l4wijrxz3swrp720q9jsa74qwv6s8zpigbnjkspsqy3vi"; depends=[]; }; + flipscores = derive2 { name="flipscores"; version="0.2"; sha256="0b55qxdrn6m0pbk4aj9zr1d9s7id6pclsaz939p48jmqx07zayjg"; depends=[]; }; + float = derive2 { name="float"; version="0.2-0"; sha256="14kkd724knd7v1wdl6qy88izk94qa1rb9cfd8myqa3va582fc5zj"; depends=[]; }; flock = derive2 { name="flock"; version="0.7"; sha256="1zg93p74icj4bhxnmnssj2xp6vw4yaksyavq03497v33xfpdxss7"; depends=[Rcpp]; }; flood = derive2 { name="flood"; version="0.1.1"; sha256="0nlmjh2l7dij1aqd70hhj0m550knlin3am14azqkx4pacs1kir3p"; depends=[copula evd magrittr TLMoments]; }; flora = derive2 { name="flora"; version="0.3.0"; sha256="1nsc2q6y02shpk70p44rr7nl7pnj6as7jgdyakxqs64imwais8x2"; depends=[dplyr httr jsonlite stringdist]; }; @@ -6525,7 +6812,7 @@ in with self; { flsa = derive2 { name="flsa"; version="1.05"; sha256="07z2b1pnpnimgbzkjgjl2b074pl9mml7nac2p8qvdgv7aj070cmh"; depends=[]; }; fluoSurv = derive2 { name="fluoSurv"; version="1.0.0"; sha256="1dv4lf7k28bih2qqkpy15f7d14ibxk48p3z6sj3dj5yvh25mhv81"; depends=[]; }; flux = derive2 { name="flux"; version="0.3-0"; sha256="0pc9cab2pwrfl0fnz29wp7a398r49hvbi50jp8i2fk2rfvck21a7"; depends=[caTools]; }; - fluxweb = derive2 { name="fluxweb"; version="0.1.1"; sha256="0y05syshj3njzhqjpgs02ils4pzw6vfvny3nng0l9pdp55015b9g"; depends=[]; }; + fluxweb = derive2 { name="fluxweb"; version="0.2.0"; sha256="1ssq90fqm4p0j4g171mx208lmgz3hkxs8hgsffkawpmxgacs0gh1"; depends=[]; }; fma = derive2 { name="fma"; version="2.3"; sha256="1z7shh9ng3q7ax22cwg86y79jzz5gbchdny2rppzzm0lkvvyy5pm"; depends=[forecast]; }; fmbasics = derive2 { name="fmbasics"; version="0.3.0"; sha256="1dnf09rgwpc7n7ydlp7r5cwy2fa4vh1h9mbjqzfhk0208kz6jpl0"; depends=[assertthat fmdates lubridate tibble]; }; fmdates = derive2 { name="fmdates"; version="0.1.4"; sha256="1bbcwkh65nf2gak9b81zgg32c5ihwhmai3nc43ayf6ivhqsxw8x0"; depends=[assertthat lubridate]; }; @@ -6538,7 +6825,6 @@ in with self; { foba = derive2 { name="foba"; version="0.1"; sha256="1af8whgl66v0vwzdf03b6141k3dysdc0svymlgifcga5gqkwzsl0"; depends=[]; }; focusedMDS = derive2 { name="focusedMDS"; version="1.3.3"; sha256="18s86dbbpyajscqr9frprf2vp1zif7vh4lw5m0cjskfc6gmsdp2p"; depends=[htmlwidgets]; }; foghorn = derive2 { name="foghorn"; version="1.0.2"; sha256="17bng0fxjqrlni11vwmghimk0h38mlyjyxizrbs1fycb8khlqh94"; depends=[clisymbols crayon curl httr jsonlite rvest tibble xml2]; }; - fold = derive2 { name="fold"; version="0.2.6"; sha256="09w157h1r1sgay37240v0f1a5ra97nra7fn4im4v69avpl34yxd2"; depends=[csv dplyr encode lattice lazyeval magrittr metaplot rlang spec tidyr]; }; fontBitstreamVera = derive2 { name="fontBitstreamVera"; version="0.1.1"; sha256="0nipdlmhjv1wr3aidcl97nk6mppdkd65krgwqnhdsnv0jpfv761j"; depends=[]; }; fontHind = derive2 { name="fontHind"; version="0.1.1"; sha256="0qz3bj8vdy6jayy84p3vyxfwqll4v4qlklwq9wl981ii2k7g0vxf"; depends=[extrafont ggplot2 hrbrthemes]; }; fontLiberation = derive2 { name="fontLiberation"; version="0.1.0"; sha256="1w1rl0g4ayyp8lwppmz9yzj9cizg7i50g07216jkm1q5w0is9pmc"; depends=[]; }; @@ -6549,34 +6835,38 @@ in with self; { foolbox = derive2 { name="foolbox"; version="0.1.0"; sha256="1wqswfsanak9p0hpgbblva4b90pamlq1hcjf4xzwd3awjicsp56y"; depends=[magrittr rlang]; }; forams = derive2 { name="forams"; version="2.0-5"; sha256="1fh3m9896ksv1h7b027yb955bzyv70yafhqvn5crkzalzk3jpb0s"; depends=[vegan]; }; forcats = derive2 { name="forcats"; version="0.3.0"; sha256="0mxn1hng43zdjh1v8shd80hrszrqahcpaqxs1s1sif0qxh84d0cm"; depends=[magrittr rlang tibble]; }; - foreSIGHT = derive2 { name="foreSIGHT"; version="0.9.2"; sha256="1wr99jq8a0cbc7n5sdzr0gwnxsv8sjqy1x1lrazxswyj49xc06i4"; depends=[cowplot directlabels doParallel GA ggplot2 moments zoo]; }; + foreSIGHT = derive2 { name="foreSIGHT"; version="0.9.6"; sha256="0vz80p227fvw18rrar5d1ikz42j47jsly0h1wmiy9gww14rcnncd"; depends=[cowplot directlabels doParallel GA ggplot2 moments zoo]; }; foreach = derive2 { name="foreach"; version="1.4.4"; sha256="0j2yj0rn0d5nbzz9nq5rqqgnxhp9pbd92q4klsarl2xpsn8119y0"; depends=[codetools iterators]; }; forecTheta = derive2 { name="forecTheta"; version="2.2"; sha256="1a7ip3czm8k82kb8dx95m8q47kjhifdj51gzavd1zj9ni3vwbhfn"; depends=[forecast tseries]; }; forecast = derive2 { name="forecast"; version="8.4"; sha256="13qq25b4r4fl18yl1wb441pqk98yqhi2gidy6si1kxgifq1xyp39"; depends=[colorspace fracdiff ggplot2 lmtest magrittr nnet Rcpp RcppArmadillo timeDate tseries urca uroot zoo]; }; - forecastHybrid = derive2 { name="forecastHybrid"; version="2.2.12"; sha256="0qvn7qn5ddpiql1464rnhn7dlp015szj0v2bbs4i5v88flp831wv"; depends=[doParallel foreach forecast ggplot2 zoo]; }; + forecastHybrid = derive2 { name="forecastHybrid"; version="3.0.14"; sha256="0n97lw1hhi9qkdp37nn66b073v0sn67i4d1aqx0rwwqz6643sqib"; depends=[doParallel foreach forecast ggplot2 zoo]; }; forecastSNSTS = derive2 { name="forecastSNSTS"; version="1.2-0"; sha256="1rnf2a7sri52sm976iicab660qk07pmz8jmd3q71dg4hmc30yf9j"; depends=[Rcpp]; }; - foreign = derive2 { name="foreign"; version="0.8-70"; sha256="11mql8q3i1q593dvd351fhvkvfab25li80d1ahl4xjjzy52qdkc6"; depends=[]; }; + foreign = derive2 { name="foreign"; version="0.8-71"; sha256="1mv04w3ycz0ymsszn8aa87k6k5sb8mg8lhf1b8w4zpfrphpkkliv"; depends=[]; }; forensic = derive2 { name="forensic"; version="0.2"; sha256="0kn8wn6p3fm67w88fbarg467vfnb42pc2cdgibs0vlgzw8l2dmig"; depends=[combinat genetics]; }; forensim = derive2 { name="forensim"; version="4.3"; sha256="1jhlv9jv832qxxw39zsfgsf4gbkpyvywg11djldlr9vav7dlh3iw"; depends=[tcltk2 tkrplot]; }; - forestControl = derive2 { name="forestControl"; version="0.1.1"; sha256="0qfj4qf0d1bb1wllhpg9r8gvg353zdqv7py9a3hm33yhs3l5x0g5"; depends=[Rcpp]; }; + forestControl = derive2 { name="forestControl"; version="0.2.0"; sha256="1w1x7i57dqlrm6zzgx4k0p1zs83nrg2w2jhhvjjk9s6y1ba3whyg"; depends=[dplyr magrittr purrr Rcpp tibble]; }; forestFloor = derive2 { name="forestFloor"; version="1.11.1"; sha256="1sslxq44qmmmdhr7800bz8lj9w2l7f7x1vly3w2z7j1qdijc7nw7"; depends=[kknn randomForest Rcpp rgl]; }; forestinventory = derive2 { name="forestinventory"; version="0.3.1"; sha256="0brbg0q8j9ymvm527db7063kgs6i6flja7mxqk7yvaf3dh8wsi46"; depends=[ggplot2 plyr tidyr]; }; + forestmangr = derive2 { name="forestmangr"; version="0.9.0"; sha256="1k3n6k7jf1b5pd1vp51z47hbln3cfwdb1nl2dv28jv1ba5lb7ja6"; depends=[broom car covr curl dplyr ggplot2 ggpmisc ggthemes htmltools magrittr minpack_lm plyr psych purrr rlang rmarkdown scales systemfit tibble tidyr]; }; forestmodel = derive2 { name="forestmodel"; version="0.5.0"; sha256="09gwgsh42gkmhs8ijq5xfbbkb1hk6sjb0q32mw2ymc6x9ycr1a9j"; depends=[broom dplyr ggplot2 lazyeval tibble]; }; forestplot = derive2 { name="forestplot"; version="1.7.2"; sha256="1cqk0fwpbn4an6xn28kpvqmcp3mgv8isg8dy755sv5fkqzzjz1dg"; depends=[checkmate magrittr]; }; forestr = derive2 { name="forestr"; version="1.0.1"; sha256="0m26x7ngl89ngk1qhg50npmwli2npmjs9pfb9rg5hmx4fzr8k63i"; depends=[dplyr ggplot2 plyr]; }; + forge = derive2 { name="forge"; version="0.1.0"; sha256="13s0fd3wknx824spw18jdiciglb7mjxdycbbsjm68989ic6nfcpi"; depends=[rlang]; }; formatR = derive2 { name="formatR"; version="1.5"; sha256="19sd23vgs4ac0fwlw40j3676k6mramb0ajlq8hdw23kjwdx1jk47"; depends=[]; }; formattable = derive2 { name="formattable"; version="0.2.0.1"; sha256="1s7jjgm0j24vdwm39933ygh6xnxcfvzy4kl2mmfgas4czfcmd4rf"; depends=[htmltools htmlwidgets knitr rmarkdown]; }; formula_tools = derive2 { name="formula.tools"; version="1.7.1"; sha256="15d3ikfmsh9zszfgfkrxb3jkipl41inm7n6bhs73kwlnklnygq2g"; depends=[operator_tools]; }; formulize = derive2 { name="formulize"; version="0.1.0"; sha256="1fz8q48z4zvfglxzmmjznb7lcfrrfqmnws85jfkihs3ff43h7ccc"; depends=[recipes rlang]; }; fortunes = derive2 { name="fortunes"; version="1.5-4"; sha256="109ly9kpfn6hy294ava8795wy5z9l1bnl98hhhv8kn9naf4camdg"; depends=[]; }; + forward = derive2 { name="forward"; version="1.0.4"; sha256="0qhssp8mymy5wgzfkp1xa8s81j803g0ckg647ind6ms26320hq0x"; depends=[MASS]; }; forwards = derive2 { name="forwards"; version="0.1.0"; sha256="0pb101gdf2a4plalhhm34aixkss3lzfg8yj6yfi0d6khjmaza33i"; depends=[]; }; fossil = derive2 { name="fossil"; version="0.3.7"; sha256="188hyb3r1dnxkmqf2czh1kdzmk4mjc0v1kn1zml2yvxaxk7adsrz"; depends=[maps shapefiles sp]; }; fourPNO = derive2 { name="fourPNO"; version="1.0.4"; sha256="08l359fj39sdbq48qk05805kv25rw1wq93db0b7rvsi3iyi2lngk"; depends=[Rcpp RcppArmadillo]; }; fourierin = derive2 { name="fourierin"; version="0.2.2"; sha256="0hy033bzybdc214z10wnbqph5f83fsr13admnzwb1d2drpbljnc8"; depends=[Rcpp RcppArmadillo]; }; fpCompare = derive2 { name="fpCompare"; version="0.2.2"; sha256="10a87bpbpvrbrpyfx7ygyr9b7wd3fp79nd4g2ggl1gz3b1daqgxq"; depends=[]; }; fpa = derive2 { name="fpa"; version="1.0"; sha256="0kgpl9qq0l10h0vdd2f8vnir0kdylh1jvvv5z4d9ygj1pl9qywhk"; depends=[fields reshape]; }; - fpc = derive2 { name="fpc"; version="2.1-11"; sha256="04alsqb5gbhsjg1000d8w52pmpnlwca29r0s12f7n7mdccdv6xar"; depends=[class cluster diptest flexmix kernlab MASS mclust mvtnorm prabclus robustbase trimcluster]; }; + fpc = derive2 { name="fpc"; version="2.1-11.1"; sha256="1ari57hkgqsxh6khr6j52cfrzc0096cnn1q7ghxk2z4brdd4rznc"; depends=[class cluster diptest flexmix kernlab MASS mclust mvtnorm prabclus robustbase trimcluster]; }; fpca = derive2 { name="fpca"; version="0.2-1"; sha256="13b102026xlfb7c2rb3xsqsymm7xpmaxppaafjkb5dx0b1lz0jrc"; depends=[sm]; }; + fpeek = derive2 { name="fpeek"; version="0.1.0"; sha256="0cx5ycpnk4c0q3qqn8miz0mxbz2v5cpzvl7fh2fzfig05qsvfx31"; depends=[Rcpp]; }; fpest = derive2 { name="fpest"; version="0.1.1"; sha256="013r8295spm02j558aqvnrnbkg2g73gl5vi4lqzngbw8yr8qlkri"; depends=[]; }; fpmoutliers = derive2 { name="fpmoutliers"; version="0.1.0"; sha256="108bp3smk9jnckd5237xly4ywmal03rq1kidq5z61l6zrhc3yfh9"; depends=[arules doParallel foreach Matrix pmml pryr R_utils XML]; }; fpow = derive2 { name="fpow"; version="0.0-2"; sha256="0am3nczimcfrm9hi02vl2xxsh703qjmr2j11y014mll3f2v1l8cy"; depends=[]; }; @@ -6591,23 +6881,26 @@ in with self; { fractional = derive2 { name="fractional"; version="0.1.3"; sha256="1jz83y53s0xdphh1z3v3z7xhcmhx7rp0iiazw2vdsx2747r3rirn"; depends=[Rcpp]; }; fragilityindex = derive2 { name="fragilityindex"; version="0.1.0"; sha256="06f7w0ff8mmydgylz5a0z29fc78spvmay3sjq0rz9k44w4bb9z3q"; depends=[pbapply stringr survival]; }; frailtyEM = derive2 { name="frailtyEM"; version="0.8.8"; sha256="0mfhhb025wzwvch5bcvvfsljki34xahdkqli7lvqbhhihba00r1p"; depends=[expint ggplot2 magrittr Matrix msm numDeriv Rcpp survival tibble]; }; - frailtySurv = derive2 { name="frailtySurv"; version="1.3.4"; sha256="0nsrgkfr726hkf2x3df0jgb35b6siaq7jhydzddjf4az8d08akvw"; depends=[ggplot2 nleqslv numDeriv Rcpp reshape2 survival]; }; - frailtypack = derive2 { name="frailtypack"; version="2.12.6"; sha256="0w2v5ik4ryvl5hph9cwxcrrglwpqbyirfrayyw9g0l1wdc1mfvi4"; depends=[boot MASS nlme statmod survC1 survival]; }; + frailtyHL = derive2 { name="frailtyHL"; version="2.2"; sha256="0i6r889i4f07w6992nfsfr439psz6k3q79nkkk3zwf5fv5r6bcky"; depends=[cmprsk Matrix survival]; }; + frailtySurv = derive2 { name="frailtySurv"; version="1.3.5"; sha256="0hkl62srfm26z48nsg0s6yssrwdmpv17qzyd9fjkxir6ghhvxvzy"; depends=[ggplot2 nleqslv numDeriv Rcpp reshape2 survival]; }; + frailtypack = derive2 { name="frailtypack"; version="2.13.2"; sha256="0vchpw94qn6nymx4wi991bd6v1y0r9b6d7lmwdhc7ipn8gv0sllf"; depends=[boot MASS nlme statmod survC1 survival]; }; frair = derive2 { name="frair"; version="0.5.100"; sha256="1j557dqvc5xiz7xbl4h7vp55pc3hly8ci01qy36p02vlxhzf4hj3"; depends=[bbmle boot lamW]; }; frambgrowth = derive2 { name="frambgrowth"; version="0.1.0"; sha256="1xmy1zxp7aa2n8frlxhn1bl41zda1jldvvxb3q41yam3pslc8m1q"; depends=[]; }; franc = derive2 { name="franc"; version="1.1.1"; sha256="0agrzdrgfw4a3jn6a2867rf99a87ngv6wi73ys2l7gr7mkpq54v5"; depends=[jsonlite]; }; frbs = derive2 { name="frbs"; version="3.1-0"; sha256="0ngvi7lg6aviwic8f4ya03khyzh3ksglpmsnrdjjznwj874y2wim"; depends=[]; }; - freegroup = derive2 { name="freegroup"; version="1.0"; sha256="1x0n3mjm37b83lxa0bcylbrn1c0sdvl54mz317a8g2y2ydk7h3zi"; depends=[magrittr]; }; + fredr = derive2 { name="fredr"; version="1.0.0"; sha256="1hv51m0ihdpb73rp2gwj2q2xpjzlqpf9p3xzqdmy9nhwpfbj14nh"; depends=[httr jsonlite rlang tibble]; }; + freegroup = derive2 { name="freegroup"; version="1.1-0"; sha256="0ssshs2d6l2ip1xx9x581w0cdnd2459a1mh360ybwajkjgak2ci6"; depends=[magic magrittr plyr]; }; freeknotsplines = derive2 { name="freeknotsplines"; version="1.0.1"; sha256="1yl53rnngrpj5mv1fgd0rgiqaw431g4ckxl1bq0l712647njx02a"; depends=[]; }; freestats = derive2 { name="freestats"; version="0.0.3"; sha256="0b18n8idap089gkmjknzzb94dvs2drpdqs0mrw7dqnacxgbbqwfj"; depends=[MASS mvtnorm]; }; freesurfer = derive2 { name="freesurfer"; version="1.6.1"; sha256="1ibhl5sbz85skkawmfdr9df6wdq6b3bl6cdvykx0gcszmd3fiabh"; depends=[neurobase R_utils reshape2]; }; - freetypeharfbuzz = derive2 { name="freetypeharfbuzz"; version="0.1.0"; sha256="0hz9wnn1pi09v4azi02ai7hh4iwml90pdrs329y3p8qzxmvry56b"; depends=[fontquiver]; }; + freetypeharfbuzz = derive2 { name="freetypeharfbuzz"; version="0.2.4"; sha256="1wilz554dx4glgm8nzd5gzbi6ja6gynmj3fx61s1sqas1jnby1gh"; depends=[fontquiver]; }; freqdist = derive2 { name="freqdist"; version="0.1"; sha256="1pb45jabv9s3qa7v1isd5wm9b0g9p04q5h18spcaax8397s0d2fv"; depends=[]; }; freqdom = derive2 { name="freqdom"; version="2.0.1"; sha256="0ig0ygnlcb5ndjjm5x8jpp37gvgwli9xv6zsvbbgfh72q418qswp"; depends=[matrixcalc mvtnorm]; }; freqdom_fda = derive2 { name="freqdom.fda"; version="0.9.1"; sha256="15wq9s3v441dybc8kglpbv9hdvsr9rjjq4qp4d2ipxglfp0iqj9p"; depends=[fda freqdom mvtnorm]; }; freqparcoord = derive2 { name="freqparcoord"; version="1.0.1"; sha256="011p8xh0i0x0w5rv5qz5a7fxwdhxd8l2bqi9bxv5almxd0y7ajqx"; depends=[FNN GGally ggplot2 mvtnorm]; }; frequencies = derive2 { name="frequencies"; version="0.1.1"; sha256="0d52kf4r13n59990xhra9i6gfvs4sn7ix54d0c0g56p1rj7hnh79"; depends=[dplyr]; }; - frequencyConnectedness = derive2 { name="frequencyConnectedness"; version="0.2.0"; sha256="02ha5jfkjaxyfp7x1h0xx32ijha2dh7h52z687a9y9azrqvjv0jp"; depends=[knitr pbapply urca vars]; }; + frequency = derive2 { name="frequency"; version="0.3.1"; sha256="0m3vgcwldl7zv0nwdwfz80qanibmfp8j5iv79kydhrmzzr04rbf5"; depends=[DT ggplot2 gtools knitr rmarkdown]; }; + frequencyConnectedness = derive2 { name="frequencyConnectedness"; version="0.2.1"; sha256="006cb7x65if7md5w6w90nacdmg39pv7dc8zxvchc52kmfzlps0ds"; depends=[knitr pbapply urca vars]; }; freqweights = derive2 { name="freqweights"; version="1.0.4"; sha256="1iy2vzv4wc2883yq8r31wpspa7gm7cd4wkgvbh7mwafll463zni2"; depends=[biglm data_table dplyr FactoMineR fastcluster plyr]; }; frite = derive2 { name="frite"; version="0.1.0"; sha256="0qi03m8n05hx0ghh12zqrjvsqhyir4q9qmxb657d4vzajmih0bhn"; depends=[assertthat magrittr purrr stringr tictoc]; }; frm = derive2 { name="frm"; version="1.2.2"; sha256="1dl0vca9r2dams99sc13pfpi0b3yb02x59f4c1jz07zz005c8l23"; depends=[]; }; @@ -6618,7 +6911,7 @@ in with self; { frontier = derive2 { name="frontier"; version="1.1-2"; sha256="1vpjd57cc6niwqibhz1ib46zj57d5a9m40yaq7kr9awk9di65ryz"; depends=[Formula lmtest micEcon miscTools moments plm]; }; frontiles = derive2 { name="frontiles"; version="1.2"; sha256="08qq25wbylvhvmq34wggyj0hwdlxfs9rfs8gjqsrg50xccchniqi"; depends=[classInt colorspace rgl sp]; }; frt = derive2 { name="frt"; version="0.1"; sha256="1qy76a1wkznaqzlyj1nq74mf1pnyly1s8gnff8q30zfccqk68cxv"; depends=[]; }; - fs = derive2 { name="fs"; version="1.2.3"; sha256="1kbdz8hl96b2gs5vrfnwzgimn8qf8gk6ggicr7jylxzp21zzsry5"; depends=[Rcpp]; }; + fs = derive2 { name="fs"; version="1.2.6"; sha256="0kqqaqqml8x3r1mdld40iwns0ylj2f52qsdh1vcn39f7w7c2ka8j"; depends=[Rcpp]; }; fscaret = derive2 { name="fscaret"; version="0.9.4.4"; sha256="18fhyfl3f8syyc3g937qx87dmwbv7dray6b97p1s6lnssiv61gsw"; depends=[caret gsubfn hmeasure]; }; fsdaR = derive2 { name="fsdaR"; version="0.2-21"; sha256="121khfqy1ixqp86cl3cngc40zxjpd4nm5k0lk558nxcfgyyzvx8y"; depends=[rJava robustbase]; }; fsia = derive2 { name="fsia"; version="1.1.1"; sha256="0id7cnswrqylgpwjil1zfn89ryrdpl20fim8x1srl8s1hm5bg35r"; depends=[]; }; @@ -6628,30 +6921,31 @@ in with self; { fsthet = derive2 { name="fsthet"; version="1.0.1"; sha256="0z6az1jcvdahgn97r6cpj1s6fn0lvr7j12gcw2r7wbpajrvyl5j6"; depends=[]; }; ftDK = derive2 { name="ftDK"; version="1.0"; sha256="1xs2rr2afjza97kpym5zkas3k78pilxjlh7lp1gc66banldr71g2"; depends=[dplyr httr pbapply purrr tibble]; }; ftnonpar = derive2 { name="ftnonpar"; version="0.1-88"; sha256="0df9zxwjpfc939ccnm1iipwhpf76b34v0x74nsi1mm1g927dfl0i"; depends=[]; }; - fts = derive2 { name="fts"; version="0.9.9"; sha256="1qgp8xdwr5pp2b7nd8r717a6p8b6izwqrindx2d1d0lhhnqlcwhv"; depends=[BH zoo]; }; - ftsa = derive2 { name="ftsa"; version="4.8"; sha256="1qwz3mk9dnf44016dy2dgpq0ivs2wzi5kq24jw3lbkgdjig2h6f5"; depends=[colorspace fda forecast MASS pcaPP rainbow sde]; }; + fts = derive2 { name="fts"; version="0.9.9.2"; sha256="08pwhi19db173d4nsk5rl8xa8qmaddj4bn3cjxb8ql4kny59i57q"; depends=[BH zoo]; }; + ftsa = derive2 { name="ftsa"; version="5.1"; sha256="1j8cq0fa2lkiyvaj4xcg60qz158fphakd9l2wgdv0qv1d1wsnp6g"; depends=[colorspace fda forecast MASS pcaPP rainbow sde]; }; ftsspec = derive2 { name="ftsspec"; version="1.0.0"; sha256="12f9yws1r26i240ijq0xqprl3pgbw50wv68jsm75ycplbs2jsyhs"; depends=[sna]; }; fueleconomy = derive2 { name="fueleconomy"; version="0.1"; sha256="1svy5naqfwdvmz98l80j38v06563vknajisnk596yq5rwapl71vj"; depends=[]; }; fugeR = derive2 { name="fugeR"; version="0.1.2"; sha256="0kd90s91vzv0g3v9ii733h10d8y6i05lk21p5npb3csizqbdx94l"; depends=[Rcpp snowfall]; }; fullfact = derive2 { name="fullfact"; version="1.2"; sha256="13729m2s8b32d9i9c6g2r0zkcqsw9p7nhdig8isarfn4bjzqhf71"; depends=[afex lme4]; }; - fulltext = derive2 { name="fulltext"; version="1.0.1"; sha256="08pwasz1rpnnq81mvaldjiqv79wbvw5ma89skk95h0k2pbahblka"; depends=[aRxiv crminer crul data_table hoardr httr jsonlite magrittr microdemic pdftools rcrossref rentrez rplos storr tibble whisker xml2]; }; + fulltext = derive2 { name="fulltext"; version="1.1.0"; sha256="195281yyjim7giim326lmk69xayw6n4xdkkym3azi6nj6a3g6f0v"; depends=[aRxiv crminer crul data_table digest hoardr httr jsonlite magrittr microdemic pdftools rcrossref rentrez rplos storr tibble xml2]; }; fun = derive2 { name="fun"; version="0.1-0"; sha256="0z4nq2w1wz1clc7cf87pf870hayxq5mpzhllfgwj4mmh2xpphnrf"; depends=[]; }; - funData = derive2 { name="funData"; version="1.2"; sha256="0y3ar26d6hxc4bg263qjqfb92ivhkphzizhz91wrzbfxha9dcrzz"; depends=[abind fields foreach]; }; + funData = derive2 { name="funData"; version="1.3-2"; sha256="0qifkrw4a6hrm8msxcy1dxrfiw88xmxw8avg5ls7bginq4bfsk51"; depends=[abind fields foreach]; }; funFEM = derive2 { name="funFEM"; version="1.1"; sha256="08798lvryykrxfvp2297anzl4gi81gwvc1qyyzq16nafjf65kwfy"; depends=[elasticnet fda MASS]; }; - funHDDC = derive2 { name="funHDDC"; version="2.0"; sha256="0bd58pdsg9036vk54fayvzr6il56bamrvn5vhqc3g92papp9jlm8"; depends=[fda MASS]; }; - funModeling = derive2 { name="funModeling"; version="1.6.7"; sha256="0blanw0aw7qvcs6a8ryaqvi322gaz65g6flijkbssf681im9pmjr"; depends=[dplyr entropy ggplot2 gridExtra Hmisc lazyeval moments pander RColorBrewer reshape2 ROCR scales]; }; + funHDDC = derive2 { name="funHDDC"; version="2.2.0"; sha256="1s4k6wvs6x88c7whw0bkb3pfhp8wqcmzlsv8div9df0i2fisf3zr"; depends=[fda MASS]; }; + funLBM = derive2 { name="funLBM"; version="1.0"; sha256="0krx5v1lakrrxk0j249k7sr7c6r40yg1l8l10laf4444j2qn8rjp"; depends=[fda funFEM]; }; + funModeling = derive2 { name="funModeling"; version="1.6.8"; sha256="16kivxwxds4lmhag2y17bsjpfp08ms17w4n5wznmlvpa3sc7qp1z"; depends=[dplyr entropy ggplot2 gridExtra Hmisc lazyeval moments pander RColorBrewer reshape2 ROCR scales]; }; funbarRF = derive2 { name="funbarRF"; version="1.0.1"; sha256="05smi717j4zhbrfqjyvx1rzckygigg1x8c6kb3brbpv8w33gcvx7"; depends=[BioSeqClass Biostrings bold randomForest]; }; funchir = derive2 { name="funchir"; version="0.1.4"; sha256="1mbsy65628q117c2k01wvibpjd3ibigy4yc1c8m0rf9jwsc67qjb"; depends=[data_table]; }; functional = derive2 { name="functional"; version="0.6"; sha256="120qq9apg6bf39n9vnp68db5rdhwvnj2vi12a8j8243vq8kqxdqr"; depends=[]; }; functools = derive2 { name="functools"; version="0.2.0"; sha256="0g62jdia3n09vq8mx1m2r4nl3jfcadzpym0wkldzzzjcfs90vl6b"; depends=[]; }; - funcy = derive2 { name="funcy"; version="0.9.0"; sha256="1b6ckqi2sqg324309l0mqcjpqy5idmm71s30axflr5bcrhxkkiz3"; depends=[calibrate car caTools cluster fda fields flexclust kernlab MASS Matrix plyr sm wavethresh]; }; - fungible = derive2 { name="fungible"; version="1.5"; sha256="1f4q26rfl7d35ng5nx11mzzv9fhk4zg62j63c59i649wcx1xsan9"; depends=[e1071 lattice MASS mvtnorm nleqslv R2Cuba stringr]; }; + funcy = derive2 { name="funcy"; version="1.0.0"; sha256="13r3n28fpzg4siqsdgwklgm7y38mjpd6dglwdpn8fyiirh1xmas0"; depends=[calibrate car cluster fda fields flexclust kernlab MASS Matrix plyr sm wavethresh]; }; + funique = derive2 { name="funique"; version="0.0.1"; sha256="0p9k4nxjns1xid9vmslkaap0hm6yq6pbyvylgygd808if4q1z8k6"; depends=[]; }; funnelR = derive2 { name="funnelR"; version="0.1.0"; sha256="143lb048krgh8rkkz6sm8h464kdy62w29fvvyar795vqi10bb5fy"; depends=[ggplot2]; }; funr = derive2 { name="funr"; version="0.3.2"; sha256="11mjd1ba9kwawh7k5py54mkq4g1df79d7qivan8fj11qfwfzm679"; depends=[]; }; funrar = derive2 { name="funrar"; version="1.2.2"; sha256="179kxhwkd431d2n917mzjnr5qvh09f0hdm2c78lww4ijb54dhn0l"; depends=[cluster dplyr]; }; funreg = derive2 { name="funreg"; version="1.2"; sha256="199zvqali0sb0z4yp20rm5da0kd7z3rgv47g1cb1apsbcw0cq51n"; depends=[MASS mgcv mvtnorm]; }; funtimes = derive2 { name="funtimes"; version="5.0"; sha256="0xq0n3939rsrz7dna4d3d7mrpxad2xswnblsc4a88nbq6cmx5c70"; depends=[dbscan Jmisc Kendall]; }; - furniture = derive2 { name="furniture"; version="1.7.9"; sha256="16nz028cgfhhn4xvhkzy6y1a1p6x4xfzna50q4jaih0pd980i07a"; depends=[knitr magrittr]; }; + furniture = derive2 { name="furniture"; version="1.8.0"; sha256="1f1s0zwishm73rgdj93z1975manc3a7v51mzz1478h0jp5kd2pql"; depends=[cli crayon dplyr knitr magrittr rstudioapi tibble]; }; furrr = derive2 { name="furrr"; version="0.1.0"; sha256="1ld9aa9hydna94hgm6p91zjbfv1dz1vsgchjlpknkg6irbvkfafx"; depends=[future globals purrr rlang]; }; fuser = derive2 { name="fuser"; version="1.0.1"; sha256="17lsfpd9hdichj3wflac896zyjbq7a8w2gmlgj8nbgg80f646fgr"; depends=[glmnet irlba Matrix Rcpp RcppEigen RSpectra]; }; fusionclust = derive2 { name="fusionclust"; version="1.0.0"; sha256="1h03nlk4gnz4j5h2h5bxazkka2qq983h7nglm1ghzqvbqjk6sv37"; depends=[bbmle]; }; @@ -6661,73 +6955,77 @@ in with self; { futile_options = derive2 { name="futile.options"; version="1.0.1"; sha256="0w15agpi88y3qkv6fl72zy2pzyplzgvnj41a4ixhg64mw1sck73s"; depends=[]; }; futile_paradigm = derive2 { name="futile.paradigm"; version="2.0.4"; sha256="14xsp1mgwhsawwmswqq81bv6jfz2z6ilr6pmnkx8cblyrl2nwh0v"; depends=[futile_options RUnit]; }; futility = derive2 { name="futility"; version="0.2"; sha256="0njckhwmawqhiznv241yjghh99wl72c4xknp9nzbmvi5j575rnlh"; depends=[]; }; - future = derive2 { name="future"; version="1.8.1"; sha256="1bpx6b85dd8xq37527h72qszz2dg810xcp975z93hymk1d8hf41a"; depends=[digest globals listenv]; }; - future_BatchJobs = derive2 { name="future.BatchJobs"; version="0.15.0"; sha256="0r1bnp9mnv8jk9d6dpr94cqn4zihpm7cgxqj0c3l0x9b6i0ny3z2"; depends=[BatchJobs future R_utils]; }; - future_apply = derive2 { name="future.apply"; version="1.0.0"; sha256="1jippm805hda75h24grp9pwypf10cp4m4hq55vni7qa9qhyi7r2x"; depends=[future globals]; }; - future_batchtools = derive2 { name="future.batchtools"; version="0.7.0"; sha256="0sk2qs6fgq241zibjxkmvdgv7xq0lablwwd6px6rxi7asxjv7zbh"; depends=[batchtools future]; }; - future_callr = derive2 { name="future.callr"; version="0.3.0"; sha256="0z9gmy46n823y38hq4xgc1x3v88hmz5sdfa6xsp0mk1bwlc94q8f"; depends=[callr future]; }; + future = derive2 { name="future"; version="1.10.0"; sha256="07dmb5gn29pjaya3ljmpbag1wk27i3dr63mcxgjgzkfj9dgshp32"; depends=[digest globals listenv]; }; + future_BatchJobs = derive2 { name="future.BatchJobs"; version="0.16.0"; sha256="1j4gjgqy2hikpl9x1jf0qvncyi5dsfz3hi4v4x0kw7hzlsgc6f00"; depends=[BatchJobs future R_utils]; }; + future_apply = derive2 { name="future.apply"; version="1.0.1"; sha256="1i5apv9ywwb5xhq4g0lk5q1sy23zhdvdsrx8fax3nyprinvw5a7l"; depends=[future globals]; }; + future_batchtools = derive2 { name="future.batchtools"; version="0.7.1"; sha256="0mgppqzw6qgm8dhp9kxh1nb3xpp8mw2aj1m1yaj3wivkb22fdicn"; depends=[batchtools future]; }; + future_callr = derive2 { name="future.callr"; version="0.3.1"; sha256="0h1nm65f36bpb6anjiyrb3vni5rzx4x047l0a396d2321cxszv7l"; depends=[callr future]; }; futureheatwaves = derive2 { name="futureheatwaves"; version="1.0.3"; sha256="122b2z86bzxfch67y6cpq8wj62mw0dgkzbmnpwi247kdx7w5mw1f"; depends=[data_table dplyr ggplot2 ggthemes leaflet Rcpp stringr tidyr]; }; fuzzr = derive2 { name="fuzzr"; version="0.2.2"; sha256="1cwq7a5j6lzrlz9dw3hsfap988rh1kkgf03yni7c33zl69xp5w77"; depends=[assertthat progress purrr]; }; fuzzyFDR = derive2 { name="fuzzyFDR"; version="1.0"; sha256="0zd8i9did0d9gp42xjmwrccm32glabvvy08kl8phhwb1yaq53h7w"; depends=[]; }; fuzzyRankTests = derive2 { name="fuzzyRankTests"; version="0.3-10"; sha256="1xj5xsm2s4ylv3b8v80qny201iddjym07h8d50asas7xy1k7945z"; depends=[]; }; fuzzyforest = derive2 { name="fuzzyforest"; version="1.0.5"; sha256="1ifhvdzn0rs8gxqmpz8w1prxg3pxs5jqx5lh0r4i5rai49qjy3sb"; depends=[doParallel doRNG foreach ggplot2 mvtnorm randomForest]; }; fuzzyjoin = derive2 { name="fuzzyjoin"; version="0.1.4"; sha256="06r103hshc6xcjllv5qfiw3i1ddz4c8svy0i4j0avnffaarlc2wa"; depends=[dplyr geosphere purrr stringdist stringr tidyr]; }; - fuzzyreg = derive2 { name="fuzzyreg"; version="0.3"; sha256="1mg4c71d0yc42y4iqdwkw13nlkq09parp2xwi1fv700vmnn4gk5w"; depends=[limSolve quadprog]; }; + fuzzyreg = derive2 { name="fuzzyreg"; version="0.4"; sha256="1m6vfagd5qnxdmdh2ya0vmz8jvbf0fwn95zgqcjwgvmwyafkw5m8"; depends=[limSolve quadprog]; }; fuzzywuzzyR = derive2 { name="fuzzywuzzyR"; version="1.0.3"; sha256="1kbli1m44317m95a0r34vza9p27vd9ala05jrbrdkadninwdynal"; depends=[R6 reticulate]; }; fwdmsa = derive2 { name="fwdmsa"; version="0.2"; sha256="0p0kh8am6gajfaixkvq61f12hfbm6chl9372yzn1yilhiyvqdxgp"; depends=[]; }; fwi_fbp = derive2 { name="fwi.fbp"; version="1.7"; sha256="1wk9cr0kk6zkbf111bv87n7b1wwx1qrsbjxydvbjvy8bgz0nfa62"; depends=[]; }; - fwsim = derive2 { name="fwsim"; version="0.3.3"; sha256="1ix4sl2krlr0b0wfgvy73qhpmkjymqcci3q3v60j20zapi55gxn2"; depends=[Rcpp]; }; + fwsim = derive2 { name="fwsim"; version="0.3.4"; sha256="0fy87c1x5hihfcppv1pvk3b0pwl6ygqpka40x55gbpkgssdigb1l"; depends=[Rcpp]; }; fxregime = derive2 { name="fxregime"; version="1.0-3"; sha256="15fh8yhcba2gw2xfd0yiw5ssvbgb62l6vb28bxz71ckdyv9nsahk"; depends=[car sandwich strucchange zoo]; }; g_data = derive2 { name="g.data"; version="2.4"; sha256="14a4m0v38p3j1k1kymkxwydlgm8b73hlx9m80sg1l4aj38fvflzl"; depends=[]; }; g2f = derive2 { name="g2f"; version="0.2"; sha256="1jsmiv6v8ilpxg1k1npcgqa467hpyw7mzh5m8dp7bxar4j5npsp4"; depends=[KEGGREST minval sybil]; }; + g3viz = derive2 { name="g3viz"; version="0.1.3"; sha256="0c1filziyp6bqi7i92xcrip10hs0rwxxcnawhqll80jk66lc1kl2"; depends=[cgdsr htmlwidgets jsonlite stringr]; }; gCat = derive2 { name="gCat"; version="0.1"; sha256="10990ilsjk52kqkcdngj4nq0kcbn4w1syxl1mqjq2n5g1l002yjy"; depends=[]; }; + gDefrag = derive2 { name="gDefrag"; version="0.1"; sha256="1xzp12p7w4gsy88hjl1n0ylymjbm3wqypqavkb97if94mwhlfqsh"; depends=[igraph maptools rgdal rgeos sp]; }; gIPFrm = derive2 { name="gIPFrm"; version="3.1"; sha256="08rfdac442picbw1r3xyxjzf2dc57svg44am0714z4r72mshvj04"; depends=[]; }; gLRTH = derive2 { name="gLRTH"; version="0.2.0"; sha256="1drmmr576n3pbr0q1cnnx4k7r4iz061n2cizv1kpr3wcc1g291pn"; depends=[]; }; - gMCP = derive2 { name="gMCP"; version="0.8-13"; sha256="19chbcqiw13rppp7s7y8vf42spwnna78xl2mb37n96s23fpj3qpf"; depends=[CommonJavaJars JavaGD MASS Matrix multcomp mvtnorm PolynomF rJava xlsxjars]; }; + gMCP = derive2 { name="gMCP"; version="0.8-14"; sha256="11q2d4a352z7c0ln10mdpms1cl4bh5hqmg9avmbxw54z4i00mdvy"; depends=[CommonJavaJars JavaGD MASS Matrix multcomp mvtnorm PolynomF rJava xlsxjars]; }; gMOIP = derive2 { name="gMOIP"; version="1.1.0"; sha256="122yzwicsq7q98x5dxk1mmf148v2w64jz3pd3535himx85gy9zy3"; depends=[ggplot2 ggrepel]; }; gMWT = derive2 { name="gMWT"; version="1.1"; sha256="1ws96x3vjswh6m6s9zn3r9gp7xp6ybdkkxsq9a73ng2zqz2qjdl0"; depends=[clinfun Rcpp RcppArmadillo]; }; gPCA = derive2 { name="gPCA"; version="1.0"; sha256="1ylb1d24dxnzpws9bbanwhyizjr3ljky2bhrph4c5yaq0zwwbrkw"; depends=[]; }; gPdtest = derive2 { name="gPdtest"; version="0.4"; sha256="00dlhnklfg2yp4hp7yjgr2nfswv22c007xq1mxdbkll62zgd94mq"; depends=[]; }; - gProfileR = derive2 { name="gProfileR"; version="0.6.6"; sha256="1n6cj12j102b4x9vhyl4dljp1i0r43p23cnhqbx4als2xfxdlqgi"; depends=[plyr RCurl]; }; + gProfileR = derive2 { name="gProfileR"; version="0.6.7"; sha256="12nwidbnqmnfy5dnqga26byslvdnkrpz2fi19qfcby6xx0wbndk7"; depends=[plyr RCurl]; }; gRain = derive2 { name="gRain"; version="1.3-0"; sha256="0xb746pyh8k8w1a8nz7z41bflx5xr0cqdq5l5wj7j464zv2cw6jy"; depends=[functional graph gRbase igraph magrittr Rcpp RcppArmadillo RcppEigen]; }; gRapfa = derive2 { name="gRapfa"; version="1.0"; sha256="07yzwzna9pdyzndxk6wwyl6v3gkfc7dvy1ixmdl3d38mcl1ahwyq"; depends=[igraph]; }; - gRbase = derive2 { name="gRbase"; version="1.8-3"; sha256="143qvs5mwypswdq344a48kzn83sx9jskdr9w6kxa3fzhdcqlhi7d"; depends=[graph igraph magrittr Matrix RBGL Rcpp RcppArmadillo RcppEigen]; }; + gRbase = derive2 { name="gRbase"; version="1.8-3.4"; sha256="0b6cl9p3px99vw9jx8wdcm4sh8v7zr6l4w0mk7ilrgbwzg198pyk"; depends=[graph igraph magrittr Matrix RBGL Rcpp RcppArmadillo RcppEigen]; }; gRim = derive2 { name="gRim"; version="0.2-0"; sha256="0ihl4vsnp6xkcpcf37p2xcqnbvyvjamcz5060f1kirn8xzwzq29y"; depends=[gRain graph gRbase igraph Rcpp RcppArmadillo]; }; gSEM = derive2 { name="gSEM"; version="0.4.3.4"; sha256="18kh41ibvfflz59gykiq7j2c6a72i8b0w8c2mcprd1nzhnyhvmhy"; depends=[DiagrammeR htmlwidgets knitr MASS]; }; gSeg = derive2 { name="gSeg"; version="0.5"; sha256="1f3appvy78adv9jll47smgw2apm3dkm9zrm17hhdxmcnqypd7ias"; depends=[]; }; + gStream = derive2 { name="gStream"; version="0.1.0"; sha256="02ww3s3pc7x8kvi697rfilpl5swi33v4k0q5wkv4rf6mc319m5qk"; depends=[]; }; gTests = derive2 { name="gTests"; version="0.2"; sha256="1h1sd8mrzcniq7rx7frdlxwpnsn8lifng1x99fqq703hs3znl1yq"; depends=[ade4]; }; gWQS = derive2 { name="gWQS"; version="1.1.0"; sha256="03v6b90745nd0jxil39rgay1yh1lrg9p1wbi22yffd29a2arsf22"; depends=[ggplot2 Rsolnp tableHTML ztable]; }; gWidgets = derive2 { name="gWidgets"; version="0.0-54"; sha256="13lbbbnmkvb559klgsnz0q27qlyv102xakb6yccxsxjw249hm8c2"; depends=[]; }; gWidgets2 = derive2 { name="gWidgets2"; version="1.0-7"; sha256="02jrv5x7s3jm2ajpdvgsp4zkn65gjy96rvgdxhf9smp1kb6llzg0"; depends=[digest]; }; gWidgets2RGtk2 = derive2 { name="gWidgets2RGtk2"; version="1.0-7"; sha256="14c933j0wj3lb5da75zxg3w3mfqh0nqk8rczbi4dnqd8sna6jks9"; depends=[gWidgets2 memoise RGtk2]; }; - gWidgets2tcltk = derive2 { name="gWidgets2tcltk"; version="1.0-5"; sha256="1g0p7bl76rkkrixzw4b1s99gyvi8b5a4vbnsj2wmy7y9grbzndkm"; depends=[digest gWidgets2 memoise]; }; + gWidgets2tcltk = derive2 { name="gWidgets2tcltk"; version="1.0-6"; sha256="0arh0yxx63m4df1ccrv0q3vkjncwv3ink8vkalp6ashi2932yfma"; depends=[digest gWidgets2 memoise]; }; gWidgetsRGtk2 = derive2 { name="gWidgetsRGtk2"; version="0.0-86"; sha256="0b1xqffbzxlaaaqf1vzfl0a7b6wnnslsp8v5fbxblv7w951rsc4m"; depends=[cairoDevice gWidgets RGtk2]; }; gWidgetstcltk = derive2 { name="gWidgetstcltk"; version="0.0-55"; sha256="06991rqh4927bal7j718bn2ziy6rws8yq682lmp5vbqhdd36afv2"; depends=[digest gWidgets]; }; gafit = derive2 { name="gafit"; version="0.5.1"; sha256="160z3cv22prf7118447dla9g1gimwkfad8zdil3fg8n4l22rk51a"; depends=[]; }; gaiah = derive2 { name="gaiah"; version="0.0.2"; sha256="1qc3crjxramyxl86dp8mcmvskixny7x6ji0jqf5dqf5r5qc7zrs9"; depends=[dplyr geosphere ggplot2 lazyeval magrittr maptools raster rgeos sp stringr tidyr]; }; gains = derive2 { name="gains"; version="1.2"; sha256="1nmrhc7qjlyzn04r1qyjdws5fin3idmi789kbxzilax12ya8xr7k"; depends=[]; }; + galgo = derive2 { name="galgo"; version="1.4"; sha256="1v150flk1x0rixpgvi8crd5iq28w4jk8h2iyv48hz5qmm2pvz1li"; depends=[e1071 MASS nnet R_oo randomForest rpart]; }; galts = derive2 { name="galts"; version="1.3.1"; sha256="0jg0yng1kc6s0qdhq8ps38dsxdcrgdcn8dl2dlclw6rcbknb6h4k"; depends=[DEoptim genalg]; }; - gam = derive2 { name="gam"; version="1.15"; sha256="1w6icadyfyqlkz5qijwifa3z96d460m88k8b2iaqj0cf6agmydhy"; depends=[foreach]; }; + gam = derive2 { name="gam"; version="1.16"; sha256="0blg4gghw5068z180c4bf0s77ky0wspgsi6xpcfnkf2rkvj34182"; depends=[foreach]; }; gamCopula = derive2 { name="gamCopula"; version="0.0-4"; sha256="1nj5pxcbr6k7k1m44ky306yycpx20pw8awlx7lzyw1rx1hrv5ivb"; depends=[copula doParallel foreach gsl igraph MASS mgcv numDeriv VineCopula]; }; gamRR = derive2 { name="gamRR"; version="0.4.0"; sha256="0grd9d7rar4lq82v55k7c2d3h0g2lh7ny4bpxanqgrq02jkpnz1p"; depends=[boot mgcv]; }; gamair = derive2 { name="gamair"; version="1.0-0"; sha256="13n2n4b7givzvia93awy7ym0gihl4lr08w3a6ny2pq0f3zbhzw97"; depends=[]; }; - gambin = derive2 { name="gambin"; version="2.3.0"; sha256="1kwh8s191m6gsjczqc3svf6zp1k4zi86rqz7s94rahg84vwh6a9b"; depends=[doParallel foreach gtools]; }; + gambin = derive2 { name="gambin"; version="2.4.0"; sha256="0fbn553g61l524x7yraj89plrbf66ywgy674b5hyfcfkx0xaim8n"; depends=[doParallel foreach gtools]; }; gamboostLSS = derive2 { name="gamboostLSS"; version="2.0-1"; sha256="06n2xk7k24gz95jy1cr6shpfd89ylispq6mn3fvxblqdf8vhdixj"; depends=[mboost stabs]; }; gamboostMSM = derive2 { name="gamboostMSM"; version="1.1.87"; sha256="0if0x92lch57ksll8d5i3jzk0kh40593b20c17g3hvc33920c7r0"; depends=[mboost]; }; gamclass = derive2 { name="gamclass"; version="0.58"; sha256="0dldqnbdgrafkm1a9kb0gyyfs0s2g31iv4ndlnnm2rd63ga4xxsn"; depends=[ape car DAAG KernSmooth lattice latticeExtra MASS mgcv randomForest rpart]; }; games = derive2 { name="games"; version="1.1.2"; sha256="01hbbr2hsxi5j9axpdl0jihpd55pa9hacjxmab8p7cixk3xqqqbf"; depends=[Formula MASS maxLik stringr]; }; - gamesGA = derive2 { name="gamesGA"; version="1.1.3.2"; sha256="0srxsm1zhrx1dpm94mkcsds6rwkx9gi9yfbrkzylhrxgi4g8pvwp"; depends=[shiny]; }; + gamesGA = derive2 { name="gamesGA"; version="1.1.3.5"; sha256="1xvy0azyjcr077lwpnh6083ypv0j8qjd0frkc6z6vs6fgbv2lv5p"; depends=[shiny]; }; gamlr = derive2 { name="gamlr"; version="1.13-5"; sha256="0fc27b6qcm01drb7pb14wri2hlb464jig3x7sb8njwrxcqqia14n"; depends=[Matrix]; }; - gamlss = derive2 { name="gamlss"; version="5.1-0"; sha256="00hiy8k3hls8igkcl2yzgx15mmj4f305zssav5bwsxwijj4m4pv6"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; + gamlss = derive2 { name="gamlss"; version="5.1-2"; sha256="0sq1gvsj4ydmyz3xip5565c15022rz98p979lp39i3wafrs4wh0d"; depends=[gamlss_data gamlss_dist MASS nlme survival]; }; gamlss_add = derive2 { name="gamlss.add"; version="5.0-1"; sha256="1agk6pfm04hf9dp5r6dvxqkj1hykx23a16q7vch2sg752z0dadgk"; depends=[gamlss gamlss_dist mgcv nnet rpart]; }; gamlss_cens = derive2 { name="gamlss.cens"; version="5.0-1"; sha256="1s83dgifidvc6cbrqirwlvwfzg08mlhmxxiqkbmnsy09i5j9fzd3"; depends=[gamlss gamlss_dist survival]; }; - gamlss_data = derive2 { name="gamlss.data"; version="5.0-1"; sha256="0q0ah8x141172fxh25bk913zzs5njyn24xkah23px1zsh4684gsy"; depends=[]; }; + gamlss_data = derive2 { name="gamlss.data"; version="5.1-0"; sha256="1hg63z4pybmlihnckv9r5nxckx7rjss2rkajgrkraqxal6747b8a"; depends=[]; }; gamlss_demo = derive2 { name="gamlss.demo"; version="4.3-3"; sha256="01p6abppwbnh2a2ks1g08z4iwq2fxf125y9s4qzssybsn76a3gf3"; depends=[gamlss_dist gamlss_tr rpanel]; }; - gamlss_dist = derive2 { name="gamlss.dist"; version="5.0-6"; sha256="0xz0968diww9h2z2wgq2h5bgxx3h8nsv0yy4kapcay4ds1nkfyzx"; depends=[MASS]; }; + gamlss_dist = derive2 { name="gamlss.dist"; version="5.1-0"; sha256="0cfp7l1sw4q1n0f5zvb3gzp5q94w3f2ylvvi1fgdlyzbrjmf5fdc"; depends=[MASS]; }; gamlss_mx = derive2 { name="gamlss.mx"; version="4.3-5"; sha256="1jfs3ib2imwgazf8v23fa12iaflv0pm944bkqklx8qcljxp1lcs7"; depends=[gamlss gamlss_dist nnet]; }; gamlss_nl = derive2 { name="gamlss.nl"; version="4.1-0"; sha256="083l5lsb0csxcp4vffvdv2nr7jk3s2gkcavx66m8inzw16j7xilz"; depends=[gamlss survival]; }; gamlss_spatial = derive2 { name="gamlss.spatial"; version="2.0.0"; sha256="1pgmlc6i7p5mjb1pc7b861yjl2gwr37bbzj3j2dl0qzybrs742mx"; depends=[gamlss gamlss_add gamlss_dist mgcv spam]; }; - gamlss_tr = derive2 { name="gamlss.tr"; version="5.0-0"; sha256="02akydpvwl1qkhxpr72lv9qp4z2ra69abyq51b57rh4p60g78vhm"; depends=[gamlss gamlss_dist]; }; + gamlss_tr = derive2 { name="gamlss.tr"; version="5.1-0"; sha256="1px9lhwad13s544g4ba8m7nxxd425jyakh6x1p4byxl8bn9w9qgr"; depends=[gamlss gamlss_dist]; }; gamlss_util = derive2 { name="gamlss.util"; version="4.3-4"; sha256="0p8lnwrn7cx97qnxls1x532f3ywszdyib2qiwx5qc7sam59h9c8j"; depends=[gamlss gamlss_dist zoo]; }; gamlssbssn = derive2 { name="gamlssbssn"; version="0.1.0"; sha256="1l8d4qwmq9dklm9imb3cvlncwa6jygf8kg2j1599h1nfhyyhj2vv"; depends=[gamlss gamlss_dist MASS]; }; gamm4 = derive2 { name="gamm4"; version="0.2-5"; sha256="11wblnh22xq3m3z25i30v2kd0zlf8wa3cm5z38z56rhk3l2wf5bc"; depends=[lme4 Matrix mgcv]; }; @@ -6741,10 +7039,11 @@ in with self; { gapfill = derive2 { name="gapfill"; version="0.9.6"; sha256="0384v7capab7dbyvz6b2jvnh840z6ab3857my0h3cgsys3lhn3c5"; depends=[fields foreach ggplot2 quantreg Rcpp]; }; gapmap = derive2 { name="gapmap"; version="0.0.4"; sha256="0xz19n0vvdzbfg6afp3y0qfbs3f2nfxib1cyya3cax5wqqfbzw3i"; depends=[ggplot2 reshape2]; }; gapminder = derive2 { name="gapminder"; version="0.3.0"; sha256="067cra1ca4ngwjx8d1y9pyzwcpsfi1wcal0glzyy6ghd1k6jflpv"; depends=[tibble]; }; + garray = derive2 { name="garray"; version="1.0.2"; sha256="07z5rdzk3bg4w31pdaarb0lmq26caqrn7mj396rmxrfq1l3l0bfm"; depends=[]; }; gaselect = derive2 { name="gaselect"; version="1.0.5"; sha256="0xzx00n46x6x7w1xbx8nvabkkrna45pv1i70787m8h05q1yrjjij"; depends=[Rcpp RcppArmadillo]; }; - gasfluxes = derive2 { name="gasfluxes"; version="0.2-1"; sha256="0cdqyyqb5dcn5978jmwmf06d9jcga5ma72zf3cdz72hbcil4f93k"; depends=[AICcmodavg data_table MASS sfsmisc]; }; + gasfluxes = derive2 { name="gasfluxes"; version="0.4"; sha256="1shjyksnqq2sjv8k2qidx9k1s6clh3lfvffdwxqbm3lp7wqzlmg6"; depends=[AICcmodavg data_table MASS sfsmisc]; }; gastempt = derive2 { name="gastempt"; version="0.4.01"; sha256="0jfk82yw7a95ih1s8ir432j79ix8vjbprwzr5fkzgykk07lfwm68"; depends=[assertthat BH dplyr ggplot2 nlme Rcpp RcppEigen rstan shiny StanHeaders stringr tibble]; }; - gaston = derive2 { name="gaston"; version="1.5.3"; sha256="0y49rgsnzbikm1162awxlamjc2djnxqd9j8if9si4gbmkkp90iwm"; depends=[Rcpp RcppEigen RcppParallel]; }; + gaston = derive2 { name="gaston"; version="1.5.4"; sha256="1yjl100z6cakpfd1gqryigpclyslygzvhps7w6gyrp85yipj5i0r"; depends=[Rcpp RcppEigen RcppParallel]; }; gatepoints = derive2 { name="gatepoints"; version="0.1.3"; sha256="02qxxf4a6rl3l0jdgqxmzxfnqd9lh5i0q2knaxxsiz0nd74c1jg5"; depends=[]; }; gaussDiff = derive2 { name="gaussDiff"; version="1.1"; sha256="0fqjdxp2ibbami75ba16d02dz4rz5sk8mni45di9anydx44g9d45"; depends=[]; }; gaussfacts = derive2 { name="gaussfacts"; version="0.0.2"; sha256="095x7k7m7sy1gqkbm6wiqn26252dclz62sbnkv6cjvmbdxajl7m9"; depends=[]; }; @@ -6752,14 +7051,15 @@ in with self; { gazepath = derive2 { name="gazepath"; version="1.2"; sha256="0h5a9bpgx268yh0zy3y4xfvij1ncx92x5qphjc94xmzbrl0br1mf"; depends=[jpeg scales SDMTools shiny zoo]; }; gb = derive2 { name="gb"; version="2.3.3"; sha256="0gkdkbwr168vi7lgccla49l43rkmjcfrwlqdr65mg5syzcxrh7nh"; depends=[boot KernSmooth]; }; gbRd = derive2 { name="gbRd"; version="0.4-11"; sha256="06x97rw5i6v6cgjxkfhxnw4dn7lghn5q6ra7ri5ag1x9dkfzcl82"; depends=[]; }; - gbfs = derive2 { name="gbfs"; version="1.0.0"; sha256="1kikbsdmh8v2s3kabmfpbwzzwxkzadqz7xpn5ng90npl3j8zaps6"; depends=[devtools dplyr jsonlite lubridate readr roxygen2 stringr testthat withr]; }; - gbm = derive2 { name="gbm"; version="2.1.3"; sha256="0ayrpq5qm18dsain088mbw0037bijxcy342grb6g2qnp67llpwpa"; depends=[lattice survival]; }; + gbfs = derive2 { name="gbfs"; version="1.1.0"; sha256="1c68p384fh53vi73xjk6kg51q62w49r74d1miyhxg5w56bwyw9n4"; depends=[dplyr jsonlite lubridate readr stringr]; }; + gbm = derive2 { name="gbm"; version="2.1.4"; sha256="0lp11s911y2xf9wn9288jl80qqc9wh2jrk49lxsjm94lbws51zli"; depends=[gridExtra lattice survival]; }; gbm2sas = derive2 { name="gbm2sas"; version="2.1"; sha256="0ssjlv849vssmncn01ccpp2myqib5f3g88g0d4rqma2z0ivdpk23"; depends=[gbm]; }; gbp = derive2 { name="gbp"; version="0.1.0.4"; sha256="0awg724gsfwlb0fjcvw0450qdsk4m8x8is16pj5c8fx6nc8rn8bv"; depends=[data_table magrittr Rcpp RcppArmadillo rgl]; }; gbs2ploidy = derive2 { name="gbs2ploidy"; version="1.0"; sha256="0gdjfqs9ccyaw7vi22wbyc742n1badr5ypr08g6rvi8ka5lmx836"; depends=[MASS rjags]; }; gbts = derive2 { name="gbts"; version="1.2.0"; sha256="1v8x4dnja8va28rjznyqa6js9wazndijasb95lfj2qwhxhgf5h65"; depends=[doParallel doRNG earth foreach gbm]; }; - gbutils = derive2 { name="gbutils"; version="0.2-1"; sha256="0br5b1l5dwq65v6d85mki6fpcz4y819ji7w5pgfl3h312q5s627v"; depends=[]; }; - gcKrig = derive2 { name="gcKrig"; version="1.1.1"; sha256="0bfxwi3ahhgyn1mh00b27iwz3cgabz74r00q4bhl45wjps4vngc3"; depends=[Rcpp RcppArmadillo]; }; + gbutils = derive2 { name="gbutils"; version="0.4-0"; sha256="01ka10k599c8q7l55jzkrvqlxhzdanc4xnmsh6js5ji5yr7v385f"; depends=[Rdpack]; }; + gcForest = derive2 { name="gcForest"; version="0.2.7"; sha256="10fjha76sgnrkhwjm0rm4hrbn0643p9dsyb5ahw43x8m5kmw2ydq"; depends=[cli crayon pkgdown reticulate]; }; + gcKrig = derive2 { name="gcKrig"; version="1.1.2"; sha256="1wqmw56805bny8w6zdj5zn4c89p3x39d5pkp4xslpd5f623zvf6x"; depends=[Rcpp RcppArmadillo]; }; gcbd = derive2 { name="gcbd"; version="0.2.6"; sha256="1dvnly0aljv2c4x7sn3q55ncvfdfjfgp7w0k2900p77h4w8nixia"; depends=[DBI lattice Matrix plyr reshape RSQLite]; }; gcdnet = derive2 { name="gcdnet"; version="1.0.5"; sha256="159dl8v1n7s9wnfrjb6f0b3ssblkqgbfzs15vjxhc8xkz0jp9z1c"; depends=[Matrix]; }; gcerisk = derive2 { name="gcerisk"; version="18.02.22"; sha256="1wy9l4s17ji5xj1cxjnb59qz3242yjs4zp76fy3rg1m0k7ib52vg"; depends=[cmprsk ggplot2 survival]; }; @@ -6774,7 +7074,7 @@ in with self; { gdistance = derive2 { name="gdistance"; version="1.2-2"; sha256="0lqpxsg01ibkaq50qyccdhsl2sbb4kh9bcfifs1yzsg45bq27jf8"; depends=[igraph Matrix raster sp]; }; gdm = derive2 { name="gdm"; version="1.3.11"; sha256="1bsy8fjzc0034hxw5n4ip4lkwr38fiyvw9q21bk17sxn44cnnxz4"; depends=[doParallel foreach raster Rcpp reshape2 vegan]; }; gdmp = derive2 { name="gdmp"; version="0.1.0"; sha256="1dlzxf17ssm10pw14mk5lk0plgav2mj8xf39dacyg9hlrz9pjwki"; depends=[]; }; - gdns = derive2 { name="gdns"; version="0.2.1"; sha256="0dvrknhx0d00yi429zjdcs3ghgbpfjhrclkn6cicd049qdp4q396"; depends=[dplyr httr jsonlite purrr stringi tibble]; }; + gdns = derive2 { name="gdns"; version="0.3.1"; sha256="1vydl7jacldidzx1hhqang9fw8zar8wy4cgdmr9pbw22ffw2qq7s"; depends=[httr jsonlite stringi]; }; gdpc = derive2 { name="gdpc"; version="1.1.0"; sha256="1q1c9pypkb8dv6bvgizaca4p43krc52fvlvjz9l6nkpazr1qx33d"; depends=[doParallel foreach Rcpp RcppArmadillo xts zoo]; }; gds = derive2 { name="gds"; version="0.1.0"; sha256="0kc3l93640x8d6g3pa9gbr7ci5hmryg9i1nqpasgnvb6ixv6azbm"; depends=[]; }; gdtools = derive2 { name="gdtools"; version="0.1.7"; sha256="122k9spymawfnfyksxyapwq9cigydy5nrjwhrwrhy3qkax3aycf6"; depends=[Rcpp withr]; }; @@ -6785,15 +7085,15 @@ in with self; { geecure = derive2 { name="geecure"; version="1.0-6"; sha256="0nmnrkfgblv38qvk66bdk8933icr59mayqwljkvmpy59sm6br2k5"; depends=[geepack MASS Matrix survival]; }; geepack = derive2 { name="geepack"; version="1.2-1"; sha256="13fkz38rsdk1byv6rdpdmphz5dd31r4h8ms49hali6hjh5rydzvy"; depends=[]; }; geesmv = derive2 { name="geesmv"; version="1.3"; sha256="0gm953z8q5cc1adl3d6vj5djg2inc880zfcdl5gd56fnb5gl6h1w"; depends=[gee MASS matrixcalc nlme]; }; - geex = derive2 { name="geex"; version="1.0.3"; sha256="0px197mz3qfx7s4wfdjlgjpss03y7wid1qa34xf4xan05dnrrnzc"; depends=[lme4 Matrix numDeriv rootSolve]; }; + geex = derive2 { name="geex"; version="1.0.11"; sha256="19qqgr16cd4zsmfgl9ny92ncvf1418ilvhb9h3axw24mkycins61"; depends=[lme4 Matrix numDeriv rootSolve]; }; geigen = derive2 { name="geigen"; version="2.2"; sha256="0wfd87xd438ri0a9m9dz46jfy4wpm75skc3iyppx80d03kijvcig"; depends=[]; }; geiger = derive2 { name="geiger"; version="2.0.6"; sha256="1zry3iclj7yciiiysbq6z0kn759c7hdy5fq0dcszkskqcd92qfz1"; depends=[ape coda colorspace deSolve digest MASS mvtnorm ncbit Rcpp subplex]; }; gelnet = derive2 { name="gelnet"; version="1.2.1"; sha256="10ygdfz9f5xhahlqb2divwvaljhiz8jhsd12wvq0qalx0v1h5j0p"; depends=[]; }; gem = derive2 { name="gem"; version="0.19"; sha256="11gzqpc9s1bkx1w6ncjylmfqqf3wj5hgca4lzygvlni9xz7pk517"; depends=[signal]; }; - gemlog = derive2 { name="gemlog"; version="0.26"; sha256="1cbm9rd2zwih5glj5nkmavb27j21dhsrrrr1d0ss6faf00nprbfq"; depends=[signal]; }; + gemlog = derive2 { name="gemlog"; version="0.30"; sha256="1cznlgl0gwqih63w6vfxj1ln7qfsa60c5l3wx9pri0ngcx75p9rn"; depends=[signal]; }; gems = derive2 { name="gems"; version="1.1.1"; sha256="174mjnpldb0rwjvwdgpcg1acm526gs0pjf9gi5mn9d3x9yz4r5jx"; depends=[data_table MASS msm plyr]; }; gemtc = derive2 { name="gemtc"; version="0.8-2"; sha256="0c2a9gz6rvsc5qh66ixxa4dz6lwhcmmsf2vnvxl98c9kbvdwfqm9"; depends=[coda igraph meta plyr Rglpk rjags truncnorm]; }; - genBaRcode = derive2 { name="genBaRcode"; version="1.0.0"; sha256="0313kyhy9bg9rabxk2jdgxq2brhj2kkiq0xyd3mlq6j9c626pqi8"; depends=[ape Biostrings ggnetwork ggplot2 igraph network phangorn RColorBrewer reshape2 S4Vectors shiny ShortRead stringdist visNetwork]; }; + genBaRcode = derive2 { name="genBaRcode"; version="1.1.0"; sha256="1x7hf80bqfl6ghd9vk878a86dacphp15wdw9zb198ax083q3jydm"; depends=[ape Biostrings doParallel dplyr foreach futile_logger ggnetwork ggplot2 ggseqlogo ggtree igraph network phangorn RColorBrewer reshape2 S4Vectors shiny ShortRead stringdist VennDiagram visNetwork]; }; genBart = derive2 { name="genBart"; version="1.0.1"; sha256="12z5vj41npwawz954zqkjfmg9inh063ilh7m82pn73asrxif0ay3"; depends=[clValid data_table fastcluster ggplot2 gtools limma NMF pca3d psych qusage RColorBrewer reshape2 rmarkdown scales shiny shinydashboard shinyjs statmod stringr VennDiagram]; }; genMOSS = derive2 { name="genMOSS"; version="1.2"; sha256="18qinckzz7wsw222skrq30izbj6s85i8hq6iicj9nng8gh6jydr8"; depends=[ROCR]; }; genMOSSplus = derive2 { name="genMOSSplus"; version="1.0"; sha256="1n3ngx1piy3l14k5k95wrgvrjw9238jkygfqanl3xg2na2mmkr26"; depends=[]; }; @@ -6812,9 +7112,10 @@ in with self; { genemodel = derive2 { name="genemodel"; version="1.1.0"; sha256="1x6n6k9ifv2swhyrghvm6fsz5vh85cdik8225175i9msvmkh928n"; depends=[stringr]; }; genepi = derive2 { name="genepi"; version="1.0.1"; sha256="1whhdlq9p8gmygv7464hvfz6dhm65gqq1dqls6hgpmw822zxgbd5"; depends=[]; }; genepop = derive2 { name="genepop"; version="1.0.5"; sha256="17s3azcq1fjjqi5n8rw071k1as4nnwvppmdaz2l5scn0wv120vcq"; depends=[Rcpp]; }; - generalCorr = derive2 { name="generalCorr"; version="1.1.1"; sha256="1ihp9pksi47f3fsv7wgrp1z4ylmf5n57n6h27v130mi7k5lh1gdy"; depends=[meboot np psych xtable]; }; - generalhoslem = derive2 { name="generalhoslem"; version="1.3.2"; sha256="1c6mmgdxdm384fl9yqpij3fvjzzima10knljsf50hl4q9f66lvag"; depends=[MASS reshape]; }; + generalCorr = derive2 { name="generalCorr"; version="1.1.2"; sha256="19kr8gs41lxfn2k6azz3200p3c98fhq63skx9ga3glas8cmxph0i"; depends=[meboot np psych xtable]; }; + generalhoslem = derive2 { name="generalhoslem"; version="1.3.3"; sha256="1pg8ff2c061rx1b698v2kva16rzydqrn935vb1pwbr63h8lgkv7x"; depends=[MASS reshape]; }; generator = derive2 { name="generator"; version="0.1.0"; sha256="0xjvnmnpdms8rrxxcz6pd8w4rnbv3ghzqv4m63zxia2l98x7z4rf"; depends=[]; }; + generics = derive2 { name="generics"; version="0.0.1"; sha256="02y0d6iafrw70mxdgg99cb720dlfqdr4mhpda0frp8315257c69f"; depends=[]; }; genesysr = derive2 { name="genesysr"; version="0.9.1"; sha256="0cwx00bikhr32h2mxnd9v5z80zjy3y9i7b30achhlrjzvylh6q4j"; depends=[httr jsonlite]; }; genetics = derive2 { name="genetics"; version="1.3.8.1"; sha256="0gfbrpz0zp5bgw3s21wrhjfy70laif47wcrjrm6mjgs6xapiw790"; depends=[combinat gdata gtools MASS mvtnorm]; }; genie = derive2 { name="genie"; version="1.0.4"; sha256="0ymrn42ik0rfildmyq4z0gsd7injda0dsjgx69nqb6hq0x8s5hqa"; depends=[Rcpp]; }; @@ -6835,41 +7136,42 @@ in with self; { geoBayes = derive2 { name="geoBayes"; version="0.5.1"; sha256="18m1qxzq97rddbxk99za5yfdcq6nyy4nxgikylfpsb2mxanjxyx2"; depends=[coda sp]; }; geoCount = derive2 { name="geoCount"; version="1.150120"; sha256="1kcjqls91r6p8ykn901c5p3v2lzbyainahhjpnr5c3a57v8s73ms"; depends=[Rcpp RcppArmadillo]; }; geoGAM = derive2 { name="geoGAM"; version="0.1-2"; sha256="0q09pk2npn4hjymklwfrhz2ybmjpcb6kvqkpn9l3a6cdjgk6bkmj"; depends=[grpreg MASS mboost mgcv]; }; - geoR = derive2 { name="geoR"; version="1.7-5.2"; sha256="1sy968x154bsc3i3a6mxcwnyixcnmab5bc07dgibi9vzn0nkbbpb"; depends=[MASS RandomFields sp splancs]; }; + geoR = derive2 { name="geoR"; version="1.7-5.2.1"; sha256="1fb3xm85i36q9l5lspa6fjfa82mv8fnwl30rimrlamss02ff959q"; depends=[MASS RandomFields sp splancs]; }; geoRglm = derive2 { name="geoRglm"; version="0.9-11"; sha256="0qf3nm0snrmplbwgcac0iinni7h2wqm13lm34zzfl00idzv0k9b9"; depends=[geoR sp]; }; geoSpectral = derive2 { name="geoSpectral"; version="0.17.4"; sha256="0i2k5k66gmf7zvipcd0a489rnpj14j4a4xw9k5dccpj6ybwd47l7"; depends=[dplyr leaflet maps plotly rbokeh rgdal sp spacetime xts]; }; geoaxe = derive2 { name="geoaxe"; version="0.1.0"; sha256="043y7kb24hp66j7pnpqsdixvdmppwp72y8i4f8q7xrkhaqlfb93v"; depends=[jsonlite rgeos sp]; }; - geoelectrics = derive2 { name="geoelectrics"; version="0.1.5"; sha256="0zy9m5k4b359mn29cd62cnwjm4fc19hy3l8p587yrrhsi20nbyna"; depends=[fields lattice rgl]; }; + geodetector = derive2 { name="geodetector"; version="1.0-3"; sha256="1x6mr05976vdxxgcb4fd3v7mq2lanrl44nqz6f6rk2dy3yhdqi5c"; depends=[maptools rgdal rgeos sp]; }; + geodist = derive2 { name="geodist"; version="0.0.1"; sha256="15x0p34qcac8v2ldf7hs4h28z44hvjqqidf5g0x2k6rz7692aqpd"; depends=[]; }; + geoelectrics = derive2 { name="geoelectrics"; version="0.2.0"; sha256="1dmpaf16750ni4yr36cglfz9pv9jax8jxb3kwn47kxgnx3l8qq98"; depends=[fields lattice rgl]; }; geofacet = derive2 { name="geofacet"; version="0.1.9"; sha256="0z9xd24hn9j8azd4kal81lz72zy6vv9rvwx1jsmkq7z7f1wwly48"; depends=[geogrid ggplot2 ggrepel gridExtra gtable imguR rnaturalearth sp]; }; geofd = derive2 { name="geofd"; version="1.0"; sha256="16312g9mgw52mpsfky1j20zcqkkv91ihl0xhvv1bl80diffzf0zi"; depends=[fda geoR]; }; - geogrid = derive2 { name="geogrid"; version="0.1.0"; sha256="1aiar70cy8rf7hc7kwc2g3p02x3zmp6nf9vfjjrjm94mb7yr8s48"; depends=[Rcpp RcppArmadillo rgeos sf sp]; }; - geohash = derive2 { name="geohash"; version="0.3.0"; sha256="1yabnf0a6jd4r6zh83sxb9wcn4vs8csp7c80qs6pi1nx016lirx7"; depends=[Rcpp]; }; + geogrid = derive2 { name="geogrid"; version="0.1.0.1"; sha256="1skklrv2k0a0wi86q5d5mn7ma028ggl1pby7gpl3jssh7bgxw8wp"; depends=[Rcpp RcppArmadillo rgeos sf sp]; }; geojson = derive2 { name="geojson"; version="0.2.0"; sha256="1xvbkdaaf55x015pflvcdy06ayrmhqi3my0sdqb48z129rdbr3i7"; depends=[jqr jsonlite lazyeval magrittr protolite sp]; }; - geojsonR = derive2 { name="geojsonR"; version="1.0.4"; sha256="0248lb1kgj43czp5z4q7dcrq6ra0jhq62q9x79mgyb83bqn940h8"; depends=[R6 Rcpp RcppArmadillo]; }; + geojsonR = derive2 { name="geojsonR"; version="1.0.6"; sha256="17zcrkazcnn1507m5cpphzp14m40w1wzrhrb77rl5hn1jrxqvhh5"; depends=[R6 Rcpp RcppArmadillo]; }; geojsonio = derive2 { name="geojsonio"; version="0.6.0"; sha256="10vi40ppy65yg655xy0j8zl6icn7d7icwfj4a84wpp28pd1bwic8"; depends=[geojson httr jqr jsonlite magrittr maptools readr rgdal rgeos sf sp V8]; }; geojsonlint = derive2 { name="geojsonlint"; version="0.2.0"; sha256="05j7059s1hs8i2fkmkv0mqmda3bgk5zbyi865ab0vl361wiwmdya"; depends=[httr jsonlite jsonvalidate V8]; }; - geojsonsf = derive2 { name="geojsonsf"; version="1.1"; sha256="050dcyhsjjysfp263g1f35aixrdh85zfzkg7dyhn47nr9cfgrss8"; depends=[curl rapidjsonr Rcpp]; }; - geoknife = derive2 { name="geoknife"; version="1.5.5"; sha256="0azb98zk4ayfm0z9vz5h59490xvng16p3gpdn60ca9mwdikyxks3"; depends=[curl httr sp XML]; }; + geojsonsf = derive2 { name="geojsonsf"; version="1.2"; sha256="08db4rx9m8q2cz2vzp48421r2whb7bwlls35l893zfqni9yhib89"; depends=[curl jsonify rapidjsonr Rcpp]; }; + geoknife = derive2 { name="geoknife"; version="1.6.1"; sha256="128y2m9aggcrfz2ynw2rzbq76rp61db1glzwhhc3n4rh25j974ic"; depends=[curl httr progress sp whisker xml2]; }; geomapdata = derive2 { name="geomapdata"; version="1.0-4"; sha256="1g89msnav87kim32xxbayqcx1v4439x4fsmc8xhlvq4jwlhd5xxw"; depends=[]; }; geomedb = derive2 { name="geomedb"; version="0.2"; sha256="1nsf7xzqayk8zbw3b6xpgiqk2w2kzc896gjswzxq128xw05cia0a"; depends=[ape httr]; }; - geomerge = derive2 { name="geomerge"; version="0.3.0"; sha256="12r60rxsi6x30q8h7mx0m50avvssm493qzyxiva7nglydcmhjn9r"; depends=[geosphere ggplot2 gridExtra inlmisc lubridate raster scales sp spdep]; }; - geometa = derive2 { name="geometa"; version="0.2-0"; sha256="1dz23jgix8sxnb69hb7jd41kdqifkf95jmcg2f6zqncqa6qg7glk"; depends=[R6 XML]; }; + geomerge = derive2 { name="geomerge"; version="0.3.1"; sha256="0pvyhpv4vq8mvvlybxhviq8rbazw29dgf9m0xnldaxg9r6lqdp4d"; depends=[geosphere ggplot2 gridExtra inlmisc lubridate raster scales sp spdep]; }; + geometa = derive2 { name="geometa"; version="0.3-0"; sha256="0cw29a4zsqvqyj4zmvk92752k65yhxxjqmqp0kl0pnidl18vbp46"; depends=[R6 XML]; }; geometry = derive2 { name="geometry"; version="0.3-6"; sha256="0s09vi0rr0smys3an83mz6fk41bplxyz4myrbiinf4qpk6n33qib"; depends=[magic]; }; geomnet = derive2 { name="geomnet"; version="0.2.0"; sha256="0xanzx8p34bac4zcf9j69nivwhllvsrw7x70mzgl95jhg3gvv96a"; depends=[dplyr ggplot2 network plotly readr sna tidyr]; }; - geomorph = derive2 { name="geomorph"; version="3.0.6"; sha256="1iqz8qzcdrxvz1iywkzbwia40sxj7fkw3mcncdddb9dnq016cfdy"; depends=[ape geiger jpeg Matrix rgl]; }; + geomorph = derive2 { name="geomorph"; version="3.0.7"; sha256="1q9qdpb08kfs1xs5s9xjxh98wb3hqilqynwzihlz1hsv38p99y38"; depends=[ape geiger jpeg Matrix rgl RRPP]; }; geonames = derive2 { name="geonames"; version="0.998"; sha256="1p0x260i383ddr2fwv54pxpqz9vy6vdr0lrn1xj7178vxic1dwyy"; depends=[rjson]; }; - geonapi = derive2 { name="geonapi"; version="0.1-0"; sha256="1i0pr4zrl06ym947parxk083f1b5p58bdbpm842viq1qqwavfj6z"; depends=[geometa httr openssl R6 XML]; }; + geonapi = derive2 { name="geonapi"; version="0.2-0"; sha256="1d3dxmnxdmdbz4kfg87mrk6ddachgb0fqvmhpscfzagwfhcs19zw"; depends=[geometa httr openssl R6 XML]; }; geoops = derive2 { name="geoops"; version="0.2.0"; sha256="0n9n0j849jbqv6y6lqhyhddr5zfz8i9yi03gpg9862nzkvxd3c4k"; depends=[Rcpp]; }; geoparser = derive2 { name="geoparser"; version="0.1.1"; sha256="0rk2wcig79r28a974bc181p8vypxzbgxcb9rsp24qj9mg02rn5n5"; depends=[digest dplyr httr jsonlite lazyeval purrr stringr tidyr]; }; geophys = derive2 { name="geophys"; version="1.4-1"; sha256="1s64sbr0chv0z2vaw059khfkv8iga1kr6428kkglgafq5x2d6h3q"; depends=[cluster GEOmap RFOC RPMG RSEIS]; }; - georob = derive2 { name="georob"; version="0.3-6"; sha256="01gq9ymqk3zyjs5n7nj27ky2bnhc7x7npbipa5bcq7jda6gxirhr"; depends=[abind constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; }; - geosapi = derive2 { name="geosapi"; version="0.2-0"; sha256="15w2rd0scv0aywngp2h7nzbgh4ddbgnf54scd454ixgv67m99p5f"; depends=[httr openssl R6 XML]; }; + georob = derive2 { name="georob"; version="0.3-7"; sha256="1bs54qmj9qwh0pxllmsvc6camw8mk44538yhm164xbm9l344s1vz"; depends=[abind constrainedKriging fields lmtest nleqslv nlme quantreg RandomFields robustbase snowfall sp]; }; + geosapi = derive2 { name="geosapi"; version="0.3-0"; sha256="0yl2iaynhx0zgfcfkqp9hbyjh27fzhyra7q30ks9v48s0rhjv1mx"; depends=[httr openssl R6 XML]; }; geoscale = derive2 { name="geoscale"; version="2.0"; sha256="0gisds0in32xhw54fxfyxvwxgrfjs871wmqf6l915nr896rlx0bm"; depends=[]; }; geospacom = derive2 { name="geospacom"; version="0.5-8"; sha256="14qyjbq0n43c2zr9gp11gdqgarvmicx3gpq2ql2vjfzrmirxwjgg"; depends=[classInt geosphere maptools rgeos sp]; }; geosphere = derive2 { name="geosphere"; version="1.5-7"; sha256="186qdm5niq7v3d4w4rngx71znsgi44hnam7698bsx9ar5mg5b6wx"; depends=[sp]; }; geospt = derive2 { name="geospt"; version="1.0-2"; sha256="1814nn0naxvbn0bqfndpmizjbqcs6rm87g2s378axkn6qpii4bh8"; depends=[fields genalg gsl gstat limSolve MASS minqa plyr sgeostat sp TeachingDemos]; }; geosptdb = derive2 { name="geosptdb"; version="0.5-0"; sha256="0m0dlazhq2za71mi3q8mz2zvz7yrmda7lha02kh9n820bx89v33z"; depends=[FD fields geospt gsl limSolve minqa sp StatMatch]; }; - geostatsp = derive2 { name="geostatsp"; version="1.7.1"; sha256="141mvwkqk2jpyggmzvm604s37h92gbmzch3d84dq3ng29mc507s2"; depends=[abind Matrix numDeriv raster sp]; }; + geostatsp = derive2 { name="geostatsp"; version="1.7.2"; sha256="0g1yvdj0bgdpq4mhcyy5yvsb4azm982vknbyzrr2415szv1910kb"; depends=[abind Matrix numDeriv raster sp]; }; geotech = derive2 { name="geotech"; version="1.0"; sha256="18s7w6h1svc4n1hcgj5njfkf3nflkc53cdwsq5112p3442rlz33f"; depends=[]; }; geotools = derive2 { name="geotools"; version="0.1"; sha256="0d0vf9dvrrv68ivssp58qzaj8vra26ms33my097jmzmgagwy1spd"; depends=[]; }; geotoolsR = derive2 { name="geotoolsR"; version="1.0"; sha256="1arbyb1q96ya3smn9sqzqji5v21x37iyyxmvlmqmjj75an8ix5dp"; depends=[dplyr geoR ggplot2 tidyr]; }; @@ -6877,51 +7179,52 @@ in with self; { geozoning = derive2 { name="geozoning"; version="1.0.0"; sha256="0cqdi2jgqrxc339qkr57dp11jp40x99f9inwamnh7ymg2q7kq14s"; depends=[deldir fields ggplot2 gstat maptools RandomFields raster rgeos sp]; }; geozoo = derive2 { name="geozoo"; version="0.5.1"; sha256="0g91yhg7zw1bp0lxxblr2irckjg2rl4pg1vgglccnmxkzn0ji2qi"; depends=[bitops]; }; gepaf = derive2 { name="gepaf"; version="0.1.1"; sha256="0n36w40jrq3qkgmhz9wrnhp6fczw7bm96g950sa4nq33872xhfgm"; depends=[bitops]; }; - germinationmetrics = derive2 { name="germinationmetrics"; version="0.1.0"; sha256="1s6mygiwmz2cgg2dcsah4ssnj5hfilf7hfdzvv3qd57imicrlkk5"; depends=[broom ggplot2 ggrepel minpack_lm plyr Rdpack]; }; + germinationmetrics = derive2 { name="germinationmetrics"; version="0.1.1.1"; sha256="1za2vkprdl2hdpww3p4x5l1ddkcrq6jxj1chhbbq4w31blpvg5hm"; depends=[broom ggplot2 ggrepel minpack_lm plyr Rdpack]; }; gesca = derive2 { name="gesca"; version="1.0.4"; sha256="1ndn8wgp22pr017x6v7jw8jy4gd06x8110qa860hw8i6pn47wfwv"; depends=[]; }; gesis = derive2 { name="gesis"; version="0.2.1"; sha256="1cdmhfdjiwsp48a7b0r1mnagnymz606mkzpam9fsvfl72vzji2w7"; depends=[httr rvest xml2]; }; - gestalt = derive2 { name="gestalt"; version="0.1.1"; sha256="0gcvd61dyyq29gf2v3kg1y474diwi0hl28rb4w8zf11ac9lc0jvz"; depends=[rlang]; }; - getCRUCLdata = derive2 { name="getCRUCLdata"; version="0.2.4"; sha256="1468bxmy2iv1kzjnyh5y035lxmi8wfssjk0cjx63i6dg38bhq4cz"; depends=[data_table dplyr hoardr httr raster tibble tidyr]; }; + gestalt = derive2 { name="gestalt"; version="0.1.4"; sha256="1krmn19cxmbd4l0x5nzhypkr04dv7s82rnnk97szni4wdy2ih892"; depends=[rlang]; }; + getCRUCLdata = derive2 { name="getCRUCLdata"; version="0.2.5"; sha256="0wg1b92wmqccskkihq1qj4i1yrih4kb1c2b6wvl13bhz1p4xi7vn"; depends=[data_table dplyr hoardr httr raster tibble tidyr]; }; getMet = derive2 { name="getMet"; version="0.3.2"; sha256="0j1h1vy8rd7czpnb4msdb9k560pnh7kjkmpqqwzwin2ms1c0mggb"; depends=[EcoHydRology jsonlite]; }; getPass = derive2 { name="getPass"; version="0.2-2"; sha256="03ydafhh0sk3rcnpr3paajyji64x2ddp6p814p9mvbmyrblcgzcc"; depends=[rstudioapi]; }; - getTBinR = derive2 { name="getTBinR"; version="0.5.4"; sha256="1xf5b98j4b07namkhmzwmp1xhsn9g42p2zy38xhz4823x13q9yn6"; depends=[data_table dplyr ggplot2 ggthemes magrittr plotly purrr scales tibble tidyr viridis]; }; + getProxy = derive2 { name="getProxy"; version="1.12"; sha256="0qcxihgwy3h2b98z2hwjszwqbz117d89xjys7fy0f8m9hv7rf6ph"; depends=[bitops data_table dplyr httr jsonlite RCurl]; }; + getTBinR = derive2 { name="getTBinR"; version="0.5.5"; sha256="0plpymf74j4q76mp5pi6692zs3vz7r466pracphb49bpl3a3nvqp"; depends=[data_table dplyr ggplot2 ggthemes magrittr plotly purrr scales tibble tidyr viridis]; }; getlandsat = derive2 { name="getlandsat"; version="0.2.0"; sha256="15450v93lc4i2qda0zlb5vplwbarkmf3f6sb4rlrdpv9vlj85hff"; depends=[crul data_table rappdirs readr tibble xml2]; }; getmstatistic = derive2 { name="getmstatistic"; version="0.1.1"; sha256="14w0n658s624anvxv7sqcgy6vfaaxcc7fj4xi1k2qrxd9rdh6dza"; depends=[ggplot2 gridExtra gtable metafor psych stargazer]; }; getopt = derive2 { name="getopt"; version="1.20.2"; sha256="13p35lbpy7i578752fa71sbfvcsqw5qfa9p6kf8b5m3c5p9i4v1x"; depends=[]; }; - gets = derive2 { name="gets"; version="0.15"; sha256="1sz225bymjp2mrklpjagh6x622kpcvh21r0rmimd1mjhqbg0p9vs"; depends=[zoo]; }; + gets = derive2 { name="gets"; version="0.16"; sha256="0ipnf8jlirwvr9zjyw7dxmm8vqjznlw2k7iy56pm2hyc70ssyxw8"; depends=[zoo]; }; gettz = derive2 { name="gettz"; version="0.0.3"; sha256="1i06nfm824131q8lwwhrbzg2g9lbnmyp8k57w2vag7v8jj5rdrda"; depends=[]; }; gfcanalysis = derive2 { name="gfcanalysis"; version="1.4"; sha256="1hjgbiakf01mmaa2jhlnymcsjsj1zssay44p4sdxxxzpx4szs3vv"; depends=[animation geosphere ggplot2 plyr raster rasterVis RCurl rgdal rgeos sp stringr]; }; gfer = derive2 { name="gfer"; version="0.1.10"; sha256="1y0ra8k7zka43ibiii16vbwnc3m1i77yc9zj8rhzhmvhajjwad3l"; depends=[circlize data_table ggplot2 ggrepel googlesheets gsheet httr jsonlite rvest scatterpie stringi tidyr V8 xml2]; }; gfmR = derive2 { name="gfmR"; version="1.1-0"; sha256="0qzzbcra1fnbp0h31b1as20yhmqmi7p62xrhikj64an9avg9b277"; depends=[faraway nnet]; }; ggChernoff = derive2 { name="ggChernoff"; version="0.2.0"; sha256="09bh9isvx3hwwvg72fv6z3fvp8dimpbhvbp328z8amq8jjhph4vf"; depends=[ggplot2 scales]; }; ggExtra = derive2 { name="ggExtra"; version="0.8"; sha256="1m5zpn3l3p1y3d2692gyz50m63d58m2a3b7zb595kvcffdx2qr5b"; depends=[colourpicker ggplot2 gtable miniUI scales shiny shinyjs]; }; - ggFacetSample = derive2 { name="ggFacetSample"; version="1.0.0"; sha256="04h5j54wblrygiscvb6n40b9lz42ssds1yz9qs5hxppiph68k5zq"; depends=[ggplot2 plyr]; }; ggQC = derive2 { name="ggQC"; version="0.0.2"; sha256="1wi9hb5ihix2vfpzbhpq2clbs7c0qh84qbmdfcxw4lknb0ha9ai1"; depends=[dplyr ggplot2 tidyr]; }; ggQQunif = derive2 { name="ggQQunif"; version="0.1.5"; sha256="0vrxmqxy946mwdq0mb2m1ch41r0chrw7hcn18dr3mp10bv7pl7wj"; depends=[dplyr ggplot2 scales]; }; ggROC = derive2 { name="ggROC"; version="1.0"; sha256="0p9gdy7ia59d5m84z9flz5b03ri7nbigb3fav2v2wrml300d24vn"; depends=[ggplot2]; }; ggRandomForests = derive2 { name="ggRandomForests"; version="2.0.1"; sha256="0f8m0j79d8wbac14zk1s8812rz6vgf04bz1iqq8p4d3sxwnvaj7q"; depends=[ggplot2 randomForest randomForestSRC survival tidyr]; }; ggThemeAssist = derive2 { name="ggThemeAssist"; version="0.1.5"; sha256="1biw91a8p13h62v4w3yim6ghr98khmyhb3qd0h04asf91vvmpxbv"; depends=[formatR ggplot2 miniUI rstudioapi shiny]; }; + ggTimeSeries = derive2 { name="ggTimeSeries"; version="1.0.1"; sha256="12gi0zfl8g3x78skpkhska8b3z1pp636shrbx33rkq0iacsipqga"; depends=[data_table ggplot2]; }; ggallin = derive2 { name="ggallin"; version="0.1.1"; sha256="0hrxa7m07ppvnndivxcgxksdyblb6fw17aw46maqavlvcrz3fjgm"; depends=[ggplot2 scales]; }; - ggalluvial = derive2 { name="ggalluvial"; version="0.6.0"; sha256="1c7jigi5zph0slfk8z0has3irlm39xlpklzak6s04m2idwl7dcjz"; depends=[dplyr ggplot2 lazyeval rlang tidyr]; }; + ggalluvial = derive2 { name="ggalluvial"; version="0.9.1"; sha256="0np4dwhxz9q3p9y1w45fyvs4cphi50mbgi9wrinpi3k5i3anv6zf"; depends=[dplyr ggplot2 lazyeval rlang tidyr tidyselect]; }; ggalt = derive2 { name="ggalt"; version="0.4.0"; sha256="0ssa274d41vhd6crzjz7jqzbwgnjimxwxl23p2cx35aqs5wdfjpc"; depends=[ash dplyr extrafont ggplot2 gtable KernSmooth maps MASS plotly proj4 RColorBrewer scales tibble]; }; ggbeeswarm = derive2 { name="ggbeeswarm"; version="0.6.0"; sha256="0crk29p5vi1r3a988kms4y7r0iqwgwzsikgvh18r9wbzyr98bb5v"; depends=[beeswarm ggplot2 vipor]; }; ggbuildr = derive2 { name="ggbuildr"; version="0.1.0"; sha256="0pld635v6fv46ky7s4icwxlcnr7z6bp5ikf20adpkljwhy0wwxak"; depends=[ggplot2 purrr readr]; }; ggconf = derive2 { name="ggconf"; version="0.1.3"; sha256="0g4xasqhdiqfqahakv6p5npl56f2iakx4bnc9v9zcjr077kdda4n"; depends=[ggplot2 rly]; }; - ggcorrplot = derive2 { name="ggcorrplot"; version="0.1.1"; sha256="04jq1qpsgy8bgpilp1a02va4vz0adkjwrz9znmhv54q81qiv7h51"; depends=[ggplot2 reshape2]; }; + ggcorrplot = derive2 { name="ggcorrplot"; version="0.1.2"; sha256="12sxvd9kjgszpbk35m7fj1wv7x40bp79c0g0by1xax70r3495h93"; depends=[ggplot2 reshape2]; }; ggdag = derive2 { name="ggdag"; version="0.1.0"; sha256="0ja3v8pmlzl55n8y8n9zcg5n17w8w4vdq42bqf6h8hgyqj63rcg9"; depends=[dagitty dplyr forcats ggforce ggplot2 ggraph ggrepel igraph magrittr plyr purrr stringr tibble tidygraph]; }; ggdendro = derive2 { name="ggdendro"; version="0.1-20"; sha256="1zzq1hxd0d1qa5hrzwfkdw6fzscpcafbwbpkrb62dm559y8awp0j"; depends=[ggplot2 MASS]; }; ggdistribute = derive2 { name="ggdistribute"; version="1.0.2"; sha256="1cwm2fmpx5dvmg4jnydfp8d584dhhprb589p5ia9zf1fblc4jvvw"; depends=[data_table dplyr ggplot2 magrittr tibble]; }; - ggdmc = derive2 { name="ggdmc"; version="0.1.3.9"; sha256="07a9g6kwq4hg5zlcxndwmyprl3di7fzsn2960qyixn5bzrfk7sh2"; depends=[coda ggmcmc ggplot2 ggthemes gridExtra loo Rcpp RcppArmadillo rtdists]; }; + ggdmc = derive2 { name="ggdmc"; version="0.2.5.2"; sha256="0gswv1f1g24z34wza6fsnj1408yjvc2na1y3wnk2xi8ccqf6rj8g"; depends=[BH coda data_table ggmcmc ggplot2 matrixStats Rcpp RcppArmadillo rtdists tmvtnorm]; }; gge = derive2 { name="gge"; version="1.4"; sha256="0plwk5j2n0309ghgn8r4ws3azwn7n4jb7yfykiiwwalhs3k05lsa"; depends=[nipals reshape2 rgl]; }; ggedit = derive2 { name="ggedit"; version="0.3.0"; sha256="1v9apfkm47jcqyhjrvv8ig09gz6zsss5xj5mrckfjybd5ca08rzn"; depends=[colourpicker dplyr ggplot2 magrittr miniUI plyr purrr rlang rstudioapi scales shiny shinyAce shinyBS tidyr]; }; - ggeffects = derive2 { name="ggeffects"; version="0.4.0"; sha256="0w2w0vwbpcwm9nqvsr2ksyary8ah6ar5gw233sbc8m3z3zx33qc1"; depends=[dplyr effects ggplot2 magrittr prediction purrr rlang scales sjlabelled sjmisc sjstats tibble tidyr tidyselect]; }; + ggeffects = derive2 { name="ggeffects"; version="0.6.0"; sha256="00l02g7yssqxmcmbrzk2wsj3i9ywd0xsy0rmbfh57q1qi76a1wq1"; depends=[crayon dplyr ggplot2 lme4 magrittr MASS prediction purrr rlang scales sjlabelled sjmisc sjstats tidyr]; }; ggenealogy = derive2 { name="ggenealogy"; version="0.3.0"; sha256="169zkcp13g0ll9941a7hh31fll0mavnkb6fd3kvkibdjm621ymyh"; depends=[ggplot2 igraph plotly plyr reshape2 tibble]; }; - ggetho = derive2 { name="ggetho"; version="0.3.2"; sha256="1279y9mc4jvdpncy4xi80c2jbhkd1cv5k8hz5187dxq45ksan2bg"; depends=[behavr data_table ggplot2 labeling rlang scales stringr]; }; + ggetho = derive2 { name="ggetho"; version="0.3.4"; sha256="05wh0qk5cbcvcfgj5wf12qqbjgl1bbwcxywc16qdby7r4h5wy0gn"; depends=[behavr data_table ggplot2 labeling rlang scales stringr]; }; ggfan = derive2 { name="ggfan"; version="0.1.2"; sha256="0agk9r2g8gh5ixg25rix362c7hj8b255w3ff7iawinsndf0dmwpy"; depends=[colorspace dplyr ggplot2 rstan]; }; - ggfittext = derive2 { name="ggfittext"; version="0.5.0"; sha256="0ih6mqg53y5iaiq003wbzp6qqx4844yh5z9zw5d0k7gqclprmpn5"; depends=[ggplot2 stringi]; }; + ggfittext = derive2 { name="ggfittext"; version="0.6.0"; sha256="06zhzw7yw7i08pqb9an8gsbf7qmvf9la8s8k1zgril8jsqwf6sfl"; depends=[ggplot2 stringi]; }; ggfocus = derive2 { name="ggfocus"; version="0.8"; sha256="1gzx9hiaxni7d90wb9apqzw4rxc32gk5nrjxkgvwv52m999jh2wc"; depends=[dplyr ggplot2 magrittr RColorBrewer rlang]; }; - ggforce = derive2 { name="ggforce"; version="0.1.2"; sha256="1asz6mkgq47hp3c52dyqvzd8fyimid1by0jj263br0k0c572na9w"; depends=[dplyr ggplot2 gtable lazyeval MASS Rcpp scales tweenr units]; }; - ggformula = derive2 { name="ggformula"; version="0.8.0"; sha256="0rfkg5viznb98rd2xkq8mg8qvmxc8xm0jmiwwjfa3x2ngivgvwnw"; depends=[dplyr ggplot2 magrittr mosaicCore rlang stringr tibble]; }; + ggforce = derive2 { name="ggforce"; version="0.1.3"; sha256="0wydxmy6sfl84q94dd27m7cpg9iy6vgwzy3nr3m3cf3rfjk87sn4"; depends=[dplyr ggplot2 gtable lazyeval MASS Rcpp scales tweenr units]; }; + ggformula = derive2 { name="ggformula"; version="0.9.0"; sha256="1pmpdfjfbrc6kcpq70cr1kbj2qy711hw940g2aiis6l443z706kh"; depends=[ggplot2 ggstance magrittr mosaicCore rlang stringr tibble tidyr]; }; ggfortify = derive2 { name="ggfortify"; version="0.4.5"; sha256="1mqgikpg34czz0zj4q3yh4xq9iw2x9zkz00ss27r6pmi6zipb6rm"; depends=[dplyr ggplot2 gridExtra scales stringr tibble tidyr]; }; gggenes = derive2 { name="gggenes"; version="0.3.1"; sha256="14a3j4cjv6b4na4j1wasm3cc566armgqc81s1yy756xc9k9sp4a9"; depends=[ggfittext ggplot2 rlang]; }; ggghost = derive2 { name="ggghost"; version="0.2.1"; sha256="0kvsjadxxdf6yvzk4a6yqkg02q1ysslvf3m0a369bdim396z4hnv"; depends=[animation ggplot2]; }; @@ -6929,8 +7232,9 @@ in with self; { gghalfnorm = derive2 { name="gghalfnorm"; version="1.1.2"; sha256="1sy0m6pqmnjbqv60rljyblhis0dxwkhw751jhlad5arcgrcwf4k8"; depends=[ggplot2 ggrepel]; }; gghighlight = derive2 { name="gghighlight"; version="0.1.0"; sha256="1mfjvfm5xbih7k7qz6x8akbqgh0b18dz9pybfgh7rbq2ppwnhpy9"; depends=[dplyr ggplot2 ggrepel magrittr purrr rlang tibble]; }; ggimage = derive2 { name="ggimage"; version="0.1.7"; sha256="08xipid3n1ab2k2xs1ip3wgbdhw2ccsm49s62ygyqjp3z0cvbn2s"; depends=[ggplot2 ggplotify gridGraphics magick rvcheck scales tibble]; }; - ggiraph = derive2 { name="ggiraph"; version="0.4.3"; sha256="0mjzx4jhfjr1mb19cgl70g5hfznnshbf08hvlg6hhbavlsk8fclp"; depends=[ggplot2 htmltools htmlwidgets rvg xml2]; }; - ggiraphExtra = derive2 { name="ggiraphExtra"; version="0.1.0"; sha256="09fiwkaai4sy5kxy4p0c4ldb8ya63czff53hbm6d8fm858fw2byw"; depends=[ggiraph ggplot2 mapproj mgcv moonBook mycor plyr reshape2 scales XML]; }; + gginnards = derive2 { name="gginnards"; version="0.0.1"; sha256="1yn5qfzih4caba8ilb1pkxzrrxcb0gia4kan7ch2yqdgi1jxqyhq"; depends=[ggplot2 magrittr rlang stringr tibble]; }; + ggiraph = derive2 { name="ggiraph"; version="0.5.0"; sha256="0rwi2ch7jjgmf2lba40nd0mpfvwiqlx245hadsshn0km18rdn750"; depends=[ggplot2 htmltools htmlwidgets rvg xml2]; }; + ggiraphExtra = derive2 { name="ggiraphExtra"; version="0.2.9"; sha256="1qmw7z10h1x6xnlpq7shafg6w2bal8ni02c07fyy9f7hm02xfnzs"; depends=[dplyr ggforce ggiraph ggplot2 magrittr mgcv mycor plyr ppcor purrr RColorBrewer reshape2 scales sjlabelled sjmisc stringr tidyr webshot ztable]; }; ggjoy = derive2 { name="ggjoy"; version="0.4.1"; sha256="012md2m0jqfcccb933j423m3ck31v3p0pd41gjxpyg9082y7ixyj"; depends=[ggplot2 ggridges]; }; gglasso = derive2 { name="gglasso"; version="1.4"; sha256="0r4zfgkys8104iw1vzww3qid8a6dyn03x0jlgwrdvavfj86yhq54"; depends=[]; }; gglogo = derive2 { name="gglogo"; version="0.1.3"; sha256="1dq0bixz44p32kpma5wrqjqklal2ipjmqdwqap0xch542drlpqbn"; depends=[dplyr ggplot2 jpeg knitr magrittr plyr purrr reshape2]; }; @@ -6939,78 +7243,86 @@ in with self; { ggm = derive2 { name="ggm"; version="2.3"; sha256="1n4y459x2i0jil8chjjqqjs28a8pzfxrws2fcjkg3il7zy0zwbw3"; depends=[igraph]; }; ggmap = derive2 { name="ggmap"; version="2.6.1"; sha256="0mssb09w818jv58h7mly9y181pzv22sgcd4a079cfpq04bs0wigw"; depends=[digest geosphere ggplot2 jpeg mapproj plyr png proto reshape2 RgoogleMaps rjson scales]; }; ggmcmc = derive2 { name="ggmcmc"; version="1.1"; sha256="09b89cnmdmiwy18igzxjiq60l1xqjh022fw3rhd5kx7lnh02yza3"; depends=[dplyr GGally ggplot2 tidyr]; }; - ggmosaic = derive2 { name="ggmosaic"; version="0.1.2"; sha256="1mxa09914j9i8b14brl70a7j7ngycj8wkil3sqkd4jwplaszvhsn"; depends=[dplyr ggplot2 gridExtra NHANES plotly productplots purrr tidyr]; }; + ggmosaic = derive2 { name="ggmosaic"; version="0.2.0"; sha256="0byhp7125r015wbbnv6fq13bx38krf11r39jx9dzbr0ci6kqzkdb"; depends=[dplyr ggplot2 plotly productplots purrr rlang tidyr]; }; ggmuller = derive2 { name="ggmuller"; version="0.5.1"; sha256="1wa4gcyzbwy1s200w57phahh6rwaf62qn3i400xywkf34fsi1il8"; depends=[ape dplyr ggplot2]; }; ggnetwork = derive2 { name="ggnetwork"; version="0.5.1"; sha256="13qisn4msjzkpcmn7rh2c4ymqfxp9bayrvqngp9pysfmr6wvc6ia"; depends=[ggplot2 ggrepel network sna]; }; + ggpage = derive2 { name="ggpage"; version="0.2.2"; sha256="0azf19dhc8zawm7hgsf866j3s028ybcfpmpmna86ly6z8d4j09xf"; depends=[dplyr ggplot2 magrittr purrr rlang stringr tidytext]; }; ggparallel = derive2 { name="ggparallel"; version="0.2.0"; sha256="0zxaff0jbqkbavsmh1yyp3vdrxsam6a66hjw8lamv9pksdw1s2wf"; depends=[ggplot2 plyr reshape2]; }; - ggplot2 = derive2 { name="ggplot2"; version="3.0.0"; sha256="0kb977hizsvk3b1k3zr717q78bpmbabhl8cj9a3w717nkq1zas67"; depends=[digest gtable lazyeval MASS mgcv plyr reshape2 rlang scales tibble viridisLite withr]; }; + ggparliament = derive2 { name="ggparliament"; version="2.0.0"; sha256="04za4lm3lir95bgda1rzlsyil2fkac3j5f5f1pjw2samy6pjz80r"; depends=[dplyr ggplot2 rlang]; }; + ggperiodic = derive2 { name="ggperiodic"; version="0.1.0"; sha256="0fk4nns2rffv9q3904xq81spv5160l2ddzrhs8s96h041fxwgd0z"; depends=[dplyr ggplot2 sticky tidyselect]; }; + ggplot2 = derive2 { name="ggplot2"; version="3.1.0"; sha256="1msy36r21nlmnpyaw2m9k0ykmnd19b9il01b65w457pfw75prrs9"; depends=[digest gtable lazyeval MASS mgcv plyr reshape2 rlang scales tibble viridisLite withr]; }; ggplot2movies = derive2 { name="ggplot2movies"; version="0.0.1"; sha256="067ld6djxcpbliv70r2c1pp4z50rvwmn1xbvxfcqdi9s3k9a2v8q"; depends=[]; }; ggplotAssist = derive2 { name="ggplotAssist"; version="0.1.3"; sha256="1g0s1dkbrxmwqjqppagdbnx24s0nbjn09xwxix3dkfssz6drhala"; depends=[dplyr editData gcookbook ggplot2 ggthemes magrittr miniUI moonBook rstudioapi scales shiny shinyAce shinyWidgets stringr tibble tidyverse]; }; ggplotgui = derive2 { name="ggplotgui"; version="1.0.0"; sha256="1yfglg5438mwyml845isimzma5q6824x19jka509ng49bzmf1za0"; depends=[ggplot2 haven plotly RColorBrewer readr readxl shiny stringr]; }; - ggplotify = derive2 { name="ggplotify"; version="0.0.2"; sha256="00qkm0jlhxgihncrygmkahqq0dm6kiyfw00iyrfw0khrd4khpahb"; depends=[ggplot2 gridGraphics rvcheck]; }; - ggpmisc = derive2 { name="ggpmisc"; version="0.2.17"; sha256="1lx5a0n00994pp16jgz4c5xxsj8px6l9wl0cdsr0dr1d43lqywq1"; depends=[broom devtools dplyr ggplot2 gridExtra lubridate magrittr MASS plyr polynom rlang splus2R tibble xts zoo]; }; - ggpol = derive2 { name="ggpol"; version="0.0.2"; sha256="0viq6k5xswhb7dzzjwr59kc7lw6312x015lbx64y3vx71ncbrgkz"; depends=[dplyr ggplot2 gtable plyr rlang]; }; + ggplotify = derive2 { name="ggplotify"; version="0.0.3"; sha256="14hqlpvnaq5psz1ljcpw9isa06827rg3fm5c1dx159rsjfi56yby"; depends=[ggplot2 gridGraphics rvcheck]; }; + ggpmisc = derive2 { name="ggpmisc"; version="0.3.0"; sha256="1mmqz3qb9j77rlxlcrki21l0s4qr2h10bk810a40jxadiv2lqbcz"; depends=[broom dplyr ggplot2 gridExtra lubridate magrittr MASS plyr polynom rlang splus2R tibble xts zoo]; }; + ggpol = derive2 { name="ggpol"; version="0.0.4"; sha256="163rhms5hclp3hp2vwamvkmngv81rgg6w4l4hw10jrv5pcs3ybyy"; depends=[dplyr ggplot2 gtable plyr rlang]; }; ggpolypath = derive2 { name="ggpolypath"; version="0.1.0"; sha256="0g9zfal3vqcx16fi4abxm6l5sam475lk1f6bdik487wc2v0dkq83"; depends=[ggplot2]; }; - ggpubr = derive2 { name="ggpubr"; version="0.1.7"; sha256="110ny8p41kmbz0a5rl0mv9cqpjkx6yr3ybflp1r0fmcvhwv7cr3i"; depends=[cowplot dplyr ggplot2 ggrepel ggsci ggsignif gridExtra magrittr purrr scales tidyr]; }; - ggpval = derive2 { name="ggpval"; version="0.2.0"; sha256="1nwf3cz1258khp1barxxp28326bagvlsfhg4rcccbxcpny9vbl7d"; depends=[data_table ggplot2]; }; - ggquickeda = derive2 { name="ggquickeda"; version="0.1.0"; sha256="00j6gpika8x2yplnirj06vrc55aljcdhd2ln7081kym8xsfrjd2h"; depends=[colourpicker dplyr DT Formula ggplot2 ggrepel gridExtra Hmisc lazyeval markdown plotly quantreg rlang scales shiny shinyjs stringr survival tidyr]; }; + ggpubr = derive2 { name="ggpubr"; version="0.1.8"; sha256="0psl2zndm4wk6nnj1nv305islpxfvfgd87gjh2ph8yqn4mxpnfi1"; depends=[cowplot dplyr ggplot2 ggrepel ggsci ggsignif glue gridExtra magrittr polynom purrr scales tidyr]; }; + ggpval = derive2 { name="ggpval"; version="0.2.1"; sha256="1akhndl08nq97nvz2gzblfqsrjpxx1m632f3469mab9z1jcvaz57"; depends=[data_table ggplot2]; }; + ggquickeda = derive2 { name="ggquickeda"; version="0.1.1"; sha256="06jj9z6hd1v21r4bxsl3lshqabcc3sfqaj731j9pimrs63z0vsf8"; depends=[colourpicker dplyr DT Formula ggplot2 ggpmisc ggrepel gridExtra Hmisc lazyeval markdown plotly quantreg rlang scales shiny shinyjs stringr survival table1 tidyr]; }; ggquiver = derive2 { name="ggquiver"; version="0.1.0"; sha256="0p6li7cxjy54qrmaf9ja6aknnlxwq4sl0z1yip1mznb5rhv6lpxw"; depends=[dplyr ggplot2]; }; - ggraph = derive2 { name="ggraph"; version="1.0.1"; sha256="0sm1hf2fjfia0s8m5b1x6pi8wvww77rpck86clpa2figwvck8jqr"; depends=[digest dplyr ggforce ggplot2 ggrepel gtable igraph MASS plyr Rcpp scales viridis]; }; + ggraph = derive2 { name="ggraph"; version="1.0.2"; sha256="0fpmp326mryd1k1qvacjadksrnhbla8h960i18lmrimzrag7692c"; depends=[digest dplyr ggforce ggplot2 ggrepel gtable igraph MASS plyr Rcpp scales viridis]; }; ggraptR = derive2 { name="ggraptR"; version="1.1"; sha256="1lknd3vibysc00c6b59c0yq2r3dda7zn8bj7gxjzjv90jwpgl0b8"; depends=[dplyr ggplot2 pacman purrr shiny]; }; ggrasp = derive2 { name="ggrasp"; version="1.0"; sha256="0lini89mcxl30kx38vny9896hdf4afrz5dgivbbikkb2yyfh2cq1"; depends=[ape bgmm colorspace ggplot2 mixtools]; }; ggrepel = derive2 { name="ggrepel"; version="0.8.0"; sha256="1m3p84d6nh9mzzvxb82vgig3ngcvkz86rjwzl9a66ckdf5p611k3"; depends=[ggplot2 Rcpp scales]; }; - ggridges = derive2 { name="ggridges"; version="0.5.0"; sha256="1znvsbl3px8dddpjgdrygnpz4s685wizi0jnjvx2hrz58i0chjqj"; depends=[ggplot2 plyr scales withr]; }; + ggridges = derive2 { name="ggridges"; version="0.5.1"; sha256="0dhwcpy785ac2ny5bjp284595nnybi3554wd0yffsli0vzf7ry01"; depends=[ggplot2 plyr scales withr]; }; ggsci = derive2 { name="ggsci"; version="2.9"; sha256="0g73x6grbka7ahjh6z23m3wrcifp5rdfdiasbl8lq4sp6rplxwaa"; depends=[ggplot2 scales]; }; ggseas = derive2 { name="ggseas"; version="0.5.4"; sha256="1jpdijwll5l7bg7cmjnklkxffysi9ckzg50rw2a2cd00zwby11q9"; depends=[ggplot2 rlang seasonal zoo]; }; ggseqlogo = derive2 { name="ggseqlogo"; version="0.1"; sha256="13q6kcpxrqxqbji889fx63p0nsi08lk5yymkchig75r5k1d18ky1"; depends=[ggplot2]; }; ggsignif = derive2 { name="ggsignif"; version="0.4.0"; sha256="1rn58d7pb3axk6chiihryykrzw76adaa2yiafq4d0j6qbhax78f7"; depends=[ggplot2]; }; ggsn = derive2 { name="ggsn"; version="0.4.0"; sha256="0si3llqlb0dg482cqxhv5lm6raawqwpcd5ymjicw3780xq7d7mrk"; depends=[ggplot2 maptools png]; }; - ggspatial = derive2 { name="ggspatial"; version="0.2.1"; sha256="11vminz4kwv1ny4v9h23sp7j7d45q6v4804xv9fp04qgzbzi9lv8"; depends=[abind ggplot2 maptools plyr raster reshape2 rgdal rosm scales sp]; }; - ggspectra = derive2 { name="ggspectra"; version="0.2.4-1"; sha256="0jp1zfzsnpnvcyw4m7cn4d871pqsniyrhv3j5riir6fa4ll4nmcb"; depends=[dplyr ggplot2 ggrepel lubridate photobiology photobiologyWavebands scales tidyr]; }; - ggstance = derive2 { name="ggstance"; version="0.3"; sha256="0sr84nasr8x8ib3mdsjck73gbfg9xba50s5nxdij0ah9xqnpyhpi"; depends=[ggplot2 lazyeval plyr purrr]; }; - ggstatsplot = derive2 { name="ggstatsplot"; version="0.0.4"; sha256="19rr5cq9s9w4ivdr42ia0vqf62vsq0l1d3f3icp0zy0r9jzsdfwp"; depends=[apaTables boot broom coin cowplot crayon dplyr effsize ggcorrplot ggExtra ggplot2 ggrepel glue gtable jmv lmerTest magrittr MBESS purrr purrrlyr rlang scales sjstats tibble tidyr WRS2]; }; + ggsolvencyii = derive2 { name="ggsolvencyii"; version="0.1.0"; sha256="0qg2qlgnbndrjsri0n628niin2m4g7mhz59szr1cid88kakj33n9"; depends=[dplyr ggplot2 magrittr tidyr]; }; + ggsom = derive2 { name="ggsom"; version="0.2.1"; sha256="0gycd3yzdy58m22r62my5v0s00mr7ga7mcfa6i300arp47lzdwq1"; depends=[dplyr ggplot2 ggthemes kohonen tidyr tidyverse]; }; + ggspatial = derive2 { name="ggspatial"; version="1.0.2"; sha256="0j22s3icqxd1qv38cbznnrdfsprma9mbakfb49hfqbf9m22f2lkn"; depends=[abind ggplot2 plyr raster reshape2 rosm scales sf tibble tidyr]; }; + ggspectra = derive2 { name="ggspectra"; version="0.3.0"; sha256="1kqi555s4hib3npv09xlfbfa1kpp91p09sri5wx8ccc06l8ya9dz"; depends=[dplyr ggplot2 ggrepel lubridate photobiology photobiologyWavebands scales tidyr]; }; + ggstance = derive2 { name="ggstance"; version="0.3.1"; sha256="0v7f3xdaaridw6d4jvnsfwxmpjrasvx5vl555wsrn50aah17fkvh"; depends=[ggplot2 plyr rlang withr]; }; + ggstatsplot = derive2 { name="ggstatsplot"; version="0.0.6"; sha256="0qnsy3a4laph9a5yb1lx5a2fbyxa3swv9x20ailnwanpwc09f71l"; depends=[boot broom broom_mixed coin cowplot crayon dplyr effsize exact2x2 ggcorrplot ggExtra ggplot2 ggrepel glue jmv magrittr paletteer psych purrr purrrlyr rlang scales sjstats tibble tidyr WRS2]; }; ggswissmaps = derive2 { name="ggswissmaps"; version="0.1.1"; sha256="0is48x6k2p5dgj9q4km0dv33a9pcpfhlai9vz295y3acpyrkmnn4"; depends=[ggplot2]; }; - ggtern = derive2 { name="ggtern"; version="2.2.1"; sha256="05dszysn1qr5s4ji4il91pv19xjh5yd09w9f153fmg4cyfl716iz"; depends=[compositions ggplot2 gridExtra gtable latex2exp lattice MASS plyr proto scales]; }; - ggthemes = derive2 { name="ggthemes"; version="3.5.0"; sha256="0drbzzb4i5jq1579fx1wmgh87ybnswjn7srak2l8g771ip49xwb8"; depends=[assertthat colorspace ggplot2 scales]; }; + ggtern = derive2 { name="ggtern"; version="3.0.0"; sha256="1qfgxid4bpzfmjz4jg9rg2sc12xzymadi06ryf4kwb06z4krd1k3"; depends=[compositions ggplot2 gridExtra gtable latex2exp lattice MASS plyr proto scales]; }; + ggthemes = derive2 { name="ggthemes"; version="4.0.1"; sha256="0y6570wv135sf7pv57l7bqilzw47rziaqx4vsk45pf1w4lmj0w8b"; depends=[ggplot2 purrr scales stringr tibble]; }; ggversa = derive2 { name="ggversa"; version="0.0.1"; sha256="0xqn8iznrm8q30pxwka88wi1z7lndi6lm12rq6ngcaxf294fbz01"; depends=[]; }; - ggvis = derive2 { name="ggvis"; version="0.4.3"; sha256="1p7c8f83da30grj5n0v80p5djp6z0r62z5zqpv2a3ahn61w1gm9l"; depends=[assertthat dplyr htmltools jsonlite lazyeval magrittr shiny]; }; + ggvis = derive2 { name="ggvis"; version="0.4.4"; sha256="1bxggjr2313kfy895j0fvrv4bg7yh2z87907lk48i1kn5c9flchk"; depends=[assertthat dplyr htmltools jsonlite lazyeval magrittr shiny]; }; + ggvoronoi = derive2 { name="ggvoronoi"; version="0.8.1"; sha256="1258y0w5jn2jg3gf7pvar1im8vlmifjj28z5syl9iyqa2hvlnrw8"; depends=[deldir ggplot2 raster rgeos sp]; }; + ggwordcloud = derive2 { name="ggwordcloud"; version="0.3.0"; sha256="0bndv4vfan0cx2lpa0qhkfaz4dmp6rda1mgc3vz0vhkg9v3x96k6"; depends=[Cairo colorspace ggplot2 png Rcpp scales]; }; gh = derive2 { name="gh"; version="1.0.1"; sha256="1llinfajb0g7006jd2w1hpskxpmkjhnqarcjb71r1qvsccb2ph7k"; depends=[httr ini jsonlite]; }; - ghibli = derive2 { name="ghibli"; version="0.1.1"; sha256="1jnl017hkzhiic0fndprs68xx3njlijxkaqj9d65xazcwynaq436"; depends=[ggplot2]; }; + ghibli = derive2 { name="ghibli"; version="0.1.2"; sha256="1cp1kdfya11qrm5wy1mr9a98dwkkw3ssjzj2ycgna0rrsml6cawk"; depends=[ggplot2]; }; ghyp = derive2 { name="ghyp"; version="1.5.7"; sha256="195hsskh2ykafqr93f675xqsmhbrki3abi61hk78bzy09n1d4jfk"; depends=[gplots numDeriv]; }; - giRaph = derive2 { name="giRaph"; version="0.1.2"; sha256="137c39fz4vz37lpws3nqhrsf4qsyf2l0mr1ml3rq49zz4146i0rz"; depends=[]; }; gibble = derive2 { name="gibble"; version="0.0.2"; sha256="0a9h3q0kwk9aagcpnmih59vbm5n7hdjpa4idwagky351almblmr6"; depends=[dplyr tibble]; }; gibbs_met = derive2 { name="gibbs.met"; version="1.1-3"; sha256="1yb5n8rkphsnxqn8rv8i54pgycv9p7x1xhinx4l5wzrds3xhf2dc"; depends=[]; }; + gifski = derive2 { name="gifski"; version="0.8.6"; sha256="00w4bzp0rrp4isy1rnxs6g1q07r3wndadk3mqdrxk2wxi7jmghna"; depends=[]; }; gifti = derive2 { name="gifti"; version="0.7.5"; sha256="1y64bc33b5f64a4khp916s9zb7kbb24xgdg3pdlh0f8m6zrbmp4a"; depends=[base64enc R_utils xml2]; }; gim = derive2 { name="gim"; version="0.11.0"; sha256="1psmziq03k1nbdl64sy152ih4g625qkbp5l7msfibrcbpgz0hg7y"; depends=[numDeriv]; }; - gimme = derive2 { name="gimme"; version="0.4-1"; sha256="1b1f92v54r9aqbwia549abjiw712ps4s58yw2n9p9894m4ijc88v"; depends=[igraph lavaan qgraph]; }; + gimme = derive2 { name="gimme"; version="0.4-2"; sha256="0vr9f0c2gxchxivxwhcqp2q5fs5a6j2w9lp0p0qrqha8b5gyqj8h"; depends=[igraph lavaan qgraph]; }; gimmeTools = derive2 { name="gimmeTools"; version="0.1"; sha256="1g170rz3c3qx27yy67f7xab4gkm0pbbvwlwkcsczfxphad609ryl"; depends=[easycsv magrittr miniUI rhandsontable rintrojs rstudioapi shiny shinyjs shinyWidgets]; }; gimms = derive2 { name="gimms"; version="1.1.0"; sha256="0mqffqvaapb0m0d50vg4kvdp67yq99qf54f5anwq4md0rf3x8lid"; depends=[curl Kendall ncdf4 raster RCurl zyp]; }; giphyr = derive2 { name="giphyr"; version="0.1.2"; sha256="1id3r291xyj1ylxgmw2cbazaz0jq4bksj8bijwagcawimfxibz45"; depends=[dplyr httr miniUI purrr rstudioapi shiny tibble]; }; gistr = derive2 { name="gistr"; version="0.4.2"; sha256="0bh325pf37v307isdlvdglripfki8xr6gh7n8mgi4cjparzhrh23"; depends=[assertthat dplyr httr jsonlite knitr magrittr rmarkdown]; }; - git2r = derive2 { name="git2r"; version="0.21.0"; sha256="11xgddmxzh9cy85k8fb90il43qswpvryz0h9r0j1gbclfg2f9004"; depends=[]; }; + git2r = derive2 { name="git2r"; version="0.23.0"; sha256="01250jz255fnyy2ap90nskvzhd8nhlmbhwgpvb43mk1fax077lrz"; depends=[]; }; gitgadget = derive2 { name="gitgadget"; version="0.2.1"; sha256="02jmp5lnk156sfqlv91jn42xds98ihya1x2f97cfwpzlas5qrxky"; depends=[curl dplyr jsonlite miniUI rstudioapi shiny]; }; githubinstall = derive2 { name="githubinstall"; version="0.2.2"; sha256="0hqh86r2007hzdbm8rr0fwqhhsna7ji8sdgmdnrxkxraa5f2pfz3"; depends=[curl data_table devtools httr jsonlite mockery]; }; gitlabr = derive2 { name="gitlabr"; version="0.9"; sha256="0i9sqqvn9xzknybsj9nmi6kclw8c35shy658li17455d28gv4653"; depends=[base64enc dplyr httr magrittr purrr stringr tibble yaml]; }; gitter = derive2 { name="gitter"; version="1.1.1"; sha256="10m4rs6mhg7xn8dfd41ai0bnn5bnxn6cgqip22hrrpj0i2lzky6l"; depends=[EBImage ggplot2 jpeg logging PET tiff]; }; givitiR = derive2 { name="givitiR"; version="1.3"; sha256="0y2slhxhj7k413kjaydin9hq3x2xgx4cgjshdplwnmg3x2nakn31"; depends=[alabama rootSolve]; }; - gjam = derive2 { name="gjam"; version="2.2.4"; sha256="16gfb199mhpg0yp7xy9x8nlpcfmhkks92fwfa1ryv6plkzn6rhkl"; depends=[MASS RANN Rcpp RcppArmadillo]; }; + gjam = derive2 { name="gjam"; version="2.2.6"; sha256="16csy2vr4ly09f5nqwad1ik1nj0yhmxs1jj1rjqdi2ramh4jlwlx"; depends=[MASS RANN Rcpp RcppArmadillo]; }; gk = derive2 { name="gk"; version="0.5.1"; sha256="1hgxb1lp78pbnj22i7ryf46im301j05y7hh75z2fxvv5nqgg2v75"; depends=[Ecdat lubridate progress]; }; gkmSVM = derive2 { name="gkmSVM"; version="0.79.0"; sha256="04dakbgfvfalz4rm4fvvybp506dn5fbj5g86ybfhrc6wywjllsz3"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges kernlab Rcpp ROCR rtracklayer S4Vectors seqinr]; }; glacierSMBM = derive2 { name="glacierSMBM"; version="0.1"; sha256="0117fzz2b1lccs0kkwz59w2yysi72j54yvz7373pz11w7rjds84f"; depends=[raster sp udunits2]; }; glamlasso = derive2 { name="glamlasso"; version="3.0"; sha256="1ynhl868kh25l8m04ln6ix31z9r26lrbr5ajprpq9yfhqs4l9ddc"; depends=[Rcpp RcppArmadillo]; }; glarma = derive2 { name="glarma"; version="1.6-0"; sha256="0n0mv4xvh5q3y383cs224x6r608ciw4822pkanvmcjsc9zl0z1ar"; depends=[MASS]; }; glassdoor = derive2 { name="glassdoor"; version="0.7.6"; sha256="0zgkz32vp71fyy25lx4kaa5gj5aj7glhxa0yqnawl1j1a4klj3v3"; depends=[httr xml2]; }; - glasso = derive2 { name="glasso"; version="1.8"; sha256="0gcapw7kyxb19wvdyxq1vsmc5j7yyd0rvqxs2i71k31q352sg6zw"; depends=[]; }; + glasso = derive2 { name="glasso"; version="1.10"; sha256="0nshpx14v2yny7lr8ll6nnz71n0f02sddh2c2dglfprbk89p9yp6"; depends=[]; }; + glassoFast = derive2 { name="glassoFast"; version="1.0"; sha256="1sgmh4l06q7mrmgnimphpqgix4k4jzaj2l30kpmnf92caa2v7ngw"; depends=[]; }; glba = derive2 { name="glba"; version="0.2"; sha256="0ckcz6v6mfbv34s8sp086czhb5l58sky79k84332rrz6wj47p3md"; depends=[]; }; glcm = derive2 { name="glcm"; version="1.6.1"; sha256="0xzfhafc7326v3g1xngp584039iknw3q3bcx8f0j4ig125in7sxk"; depends=[Rcpp RcppArmadillo]; }; gld = derive2 { name="gld"; version="2.4.1"; sha256="0ycm3w8s5bm5w2lqy0qa877cwjcwc9x1zyyyrknwwjjxip250iaw"; depends=[e1071 lmom]; }; gldrm = derive2 { name="gldrm"; version="1.5"; sha256="1mbdxqjw6sa47kigwrjq1gn6vi36zhg9j2lck144iwa10ms0y9xp"; depends=[]; }; glinternet = derive2 { name="glinternet"; version="1.0.8"; sha256="06ak80j01cbrr6s8hmcc734z476rrqzib0xqjgv7c3jbw0api71y"; depends=[]; }; gllm = derive2 { name="gllm"; version="0.35"; sha256="1m9asamh2yha9q8mrllvvc9qj2im6cspvfpafzc8krmh17zq4ins"; depends=[]; }; - gllvm = derive2 { name="gllvm"; version="0.1.0"; sha256="13ca5ms6bbrj3ny5n438v5ma0d7ccnghysz7c8452cpdq8sn87iy"; depends=[fishMod MASS Matrix mvabund mvtnorm Rcpp RcppEigen statmod TMB]; }; + gllvm = derive2 { name="gllvm"; version="1.0"; sha256="1bhxwv4nggl2pbbr3c53j8jk02l4kwzkdhg4wmv9xlpd3mc2qb07"; depends=[fishMod MASS Matrix mvabund mvtnorm RcppEigen statmod TMB]; }; glm_deploy = derive2 { name="glm.deploy"; version="1.0.4"; sha256="1akklvbhz2pp0sv1hax1jq0s9ajbfv1597z643gh5l9hwizj2h9m"; depends=[Rcpp]; }; glm_predict = derive2 { name="glm.predict"; version="3.0-1"; sha256="0miba0xha99rmriqs7ifriq86ykn04j04f3ywk29bpph4iwc5faq"; depends=[MASS nnet]; }; - glm2 = derive2 { name="glm2"; version="1.2"; sha256="09bjqz7zih644hba27illlmzfcs94q5h4fdplg948adi1z790las"; depends=[]; }; + glm2 = derive2 { name="glm2"; version="1.2.1"; sha256="1byqlvpls23gzy7xlbs1kgfr4bsrmsrpc8rzzacf9czap1nlw39y"; depends=[]; }; glmBfp = derive2 { name="glmBfp"; version="0.0-51"; sha256="15jm450j1f0nl7vqvpb2mwapdlvn7kq2kxf5s96x21siwsz7sssv"; depends=[coda Rcpp RcppArmadillo rms Runuran statmod survival]; }; glmbb = derive2 { name="glmbb"; version="0.3"; sha256="12yabwswps0fmprh8nb9jdny9xrm13jvc0d9m3w04ppmsvalrmwl"; depends=[digest]; }; glmc = derive2 { name="glmc"; version="0.2-4"; sha256="03m1ym9w0b0gqib13pnh1yrjijlcwsn5lijg0nsr4hd6gxw29cla"; depends=[emplik]; }; @@ -7024,7 +7336,7 @@ in with self; { glmmLasso = derive2 { name="glmmLasso"; version="1.5.1"; sha256="1az9vdnyqyrfn1q7zrn6x4ywx77b0vg65cni45x37b0ybkwpis39"; depends=[Matrix minqa]; }; glmmML = derive2 { name="glmmML"; version="1.0.3"; sha256="1svawi74rfir9czqyf194wmh4fw053n81j7prnanyfskrchkd94k"; depends=[]; }; glmmTMB = derive2 { name="glmmTMB"; version="0.2.2.0"; sha256="1clpkjlmsjmn3m1z5jqv8cgw6bvpqsy4nx6k947r0jya017ny5y5"; depends=[lme4 Matrix nlme RcppEigen TMB]; }; - glmmboot = derive2 { name="glmmboot"; version="0.1.2"; sha256="0c7in0sq7q1dfgk316j0aizycn8mdpjknf1yfp3d670g3275sx87"; depends=[]; }; + glmmboot = derive2 { name="glmmboot"; version="0.2.0"; sha256="1gc04pgii1i7804mmcwgni3w0j1i9cwr7rmdm4rixnx2kxrdq9h3"; depends=[]; }; glmmfields = derive2 { name="glmmfields"; version="0.1.0"; sha256="1b7p1srwavpqm2468n4sxhbm988pxz7zvj76h86fig1jdqf9hlix"; depends=[assertthat BH broom cluster dplyr forcats ggplot2 loo mvtnorm nlme Rcpp RcppEigen reshape2 rstan rstanarm StanHeaders]; }; glmmsr = derive2 { name="glmmsr"; version="0.2.2"; sha256="05psf6yjsp3zgh7lfdh2pk1zycp7rgdk61ccm7059f60dzg182b9"; depends=[BH lme4 Matrix numDeriv R6 Rcpp RcppEigen]; }; glmnet = derive2 { name="glmnet"; version="2.0-16"; sha256="1brr51z1fzbpyj6myyir4g6dhbp6xwl7nx4xnvrjarnf5y0csk55"; depends=[foreach Matrix]; }; @@ -7039,24 +7351,27 @@ in with self; { globalGSA = derive2 { name="globalGSA"; version="1.0"; sha256="1f3xv03m6g2p725ff0xjhvn2xcfm7r7flyrba080i4ldy6fd8jg8"; depends=[]; }; globalOptTests = derive2 { name="globalOptTests"; version="1.1"; sha256="0yf4p82dpjh36ddpfrby7m3fnj2blf5s76lncflch917sq251h4f"; depends=[]; }; globalboosttest = derive2 { name="globalboosttest"; version="1.1-0"; sha256="1k7kgnday27sn6s1agzlj94asww81655d2zprx6qg7liv677bxvf"; depends=[mboost survival]; }; - globals = derive2 { name="globals"; version="0.12.1"; sha256="1yfgxnvrd0xnl5ir5835lna3a1zwy0s2apibi270mj5sflrlfwia"; depends=[codetools]; }; + globals = derive2 { name="globals"; version="0.12.4"; sha256="0szyv1ayyk31bh3xqlkj43020w44xq6s4rw2bxwizyjssxm3b1br"; depends=[codetools]; }; globe = derive2 { name="globe"; version="1.2-0"; sha256="0xa0q5dac0g7xdlr679f3km8nqxlm7gi4msp9fbfivfvy0rmri96"; depends=[]; }; glogis = derive2 { name="glogis"; version="1.0-1"; sha256="1sbvcg5slvd2c7fasvbj534x36rh11zq3mxv5z0jwpqd6h1xadmd"; depends=[sandwich zoo]; }; - glpkAPI = derive2 { name="glpkAPI"; version="1.3.0"; sha256="0173wljx13jali2jxz4k5za89hc64n2j9djz5bcryrqhq4rmkp87"; depends=[]; }; + glpkAPI = derive2 { name="glpkAPI"; version="1.3.1"; sha256="06p8zvmshymcw994mmf1ar00kfj645z8dp18yy4i5bl6qydbpb8k"; depends=[]; }; glrt = derive2 { name="glrt"; version="2.0"; sha256="0p2b0digndvnn396ynv56cdg436n3ll7pxkb81rs3dhwbyqyc948"; depends=[survival]; }; - glue = derive2 { name="glue"; version="1.2.0"; sha256="0vi9y8ix95g6hjqdz9c9y4119apbdjcypdv0ag8cl6vaxqs5n9qr"; depends=[]; }; + glue = derive2 { name="glue"; version="1.3.0"; sha256="1vhw5497lpfr4m8lcx9bs0fgdp4ax0sycrk6n8yksp33qd25m7kq"; depends=[]; }; + glycanr = derive2 { name="glycanr"; version="0.3.1"; sha256="1wygy5r5rdkcxrraqkqs2kd0nj8x2whm6k556pyd1sa4ra8xgvjp"; depends=[coin dplyr ggplot2 tidyr]; }; gmDatabase = derive2 { name="gmDatabase"; version="0.5.0"; sha256="0prap4a8pvylmvakd2ii87jz9bqf0vvfsxdi4iwa40nx444hqhx2"; depends=[DBI digest foreach RMySQL shiny]; }; gma = derive2 { name="gma"; version="1.0"; sha256="08hxbs9z4vq5zjis0lgdcvlysaj1k7i0icdk3wsyqf3wd9znsibi"; depends=[car MASS nlme]; }; gmailr = derive2 { name="gmailr"; version="0.7.1"; sha256="1gniwwl0ci0wm7a3ai2lqrr590smmkdgyf3aarw6bdygn8hr3s3y"; depends=[base64enc crayon httr jsonlite magrittr mime]; }; - gmapsdistance = derive2 { name="gmapsdistance"; version="3.3"; sha256="09vgrfv5dj0myys0rl767wn0xx1yvmm176c48812ysj2kj3fa29v"; depends=[RCurl XML]; }; + gmapsdistance = derive2 { name="gmapsdistance"; version="3.4"; sha256="1hazf6xb4ja6h2lrl63kbd78wzny9sljiid9rq1r3szn3l1mc7dn"; depends=[RCurl XML]; }; + gmat = derive2 { name="gmat"; version="0.1.0"; sha256="1fpkx91fwr6cj6jn9a4lsj5f3nhvg8lyxandqbv9z5imb73d1gci"; depends=[igraph]; }; gmediation = derive2 { name="gmediation"; version="0.1.1"; sha256="0md4h298vqw67qrjcaia6xz8s7akdpcmxa83irm12qgbh56a5rpr"; depends=[MASS plyr VGAM]; }; gmeta = derive2 { name="gmeta"; version="2.3-0"; sha256="1izfz6gkisa8rskhfka6q73rcgzwdsmkdhy79jwcaqk25jrwfk60"; depends=[BiasedUrn binom]; }; gmfd = derive2 { name="gmfd"; version="1.0.1"; sha256="03sag09x7pjyzsp6w1z06108ig068krmw75064cnl3pqfvfyjfgr"; depends=[]; }; gmm = derive2 { name="gmm"; version="1.6-2"; sha256="0pbimp4g5hpi949m6dpwwds3a9dv2m4iwwg2gbqq1m62fs18hbxi"; depends=[sandwich]; }; gmnl = derive2 { name="gmnl"; version="1.1-3"; sha256="05p2kikv8zz9ldc6xi5bz7fyinpd0sp2v82hxhx6h54hfa6i7b9v"; depends=[Formula maxLik mlogit msm plotrix truncnorm]; }; gmodels = derive2 { name="gmodels"; version="2.18.1"; sha256="0s8kd8krqk4kwv2zqxpsfy3w8qdwf5naf4b5l383vidq9sil0qb2"; depends=[gdata MASS]; }; - gmp = derive2 { name="gmp"; version="0.5-13.1"; sha256="0xh9dli4i7hyjywsn2h780cxl3k7v0q421djyr1wshk7l9s5701g"; depends=[]; }; + gmp = derive2 { name="gmp"; version="0.5-13.2"; sha256="1xd6jjra4niqv1kps91y348lwgvy73p2faxaia4gfzdnrpw7wsxf"; depends=[]; }; gmt = derive2 { name="gmt"; version="2.0-1"; sha256="1g1sj9gq3h3s0pdcfvzg7iifkns5azn3pa83if0d3yzc28cjf0yz"; depends=[]; }; + gmvarkit = derive2 { name="gmvarkit"; version="1.0.3"; sha256="1497n11a7m5mbb8d3hcr89yhfh64vqsxi2w6kvlrxmmx95q2cp70"; depends=[Brobdingnag mvnfast pbapply]; }; gnFit = derive2 { name="gnFit"; version="0.2.0"; sha256="0cji4zjslh18dfj0l827r6br4hx2f0akiaxrg7fhhyyyhgdcjnsm"; depends=[ismev rmutil]; }; gnlm = derive2 { name="gnlm"; version="1.1.0"; sha256="0fv89cvbnp9n3lgg6y4sqmz9jzcgwj7vd92rwg7hixwrjyqpan4z"; depends=[rmutil]; }; gnm = derive2 { name="gnm"; version="1.1-0"; sha256="01d7wxsh4d9w4jh8vn62sjzgpll650yl3klfhlaa8j0qwpxr2fml"; depends=[MASS Matrix nnet qvcalc relimp]; }; @@ -7066,7 +7381,7 @@ in with self; { goalprog = derive2 { name="goalprog"; version="1.0-2"; sha256="1h3nd3d53hbz5hl3494lpfjnp1ddklc17nhgw18362jd1nk14awy"; depends=[lpSolve]; }; goeveg = derive2 { name="goeveg"; version="0.3.3"; sha256="1p66fc1vr09zxp1h81b8by2cldxn0q8vivcc5g3pggb65d9wj846"; depends=[fields mgcv vegan]; }; gof = derive2 { name="gof"; version="0.9.1"; sha256="1s12gga9d6yizn2y7lzql4jd80lp5jpyml8ybn7xqswp8am82vpg"; depends=[]; }; - gofCopula = derive2 { name="gofCopula"; version="0.2-3"; sha256="1xigbv9mc0c1j3qc0nay0fjwmqvw91cy3x1z6m56bgkgfli7gp2l"; depends=[copula doParallel foreach MASS numDeriv R_utils SparseGrid VineCopula]; }; + gofCopula = derive2 { name="gofCopula"; version="0.2-4"; sha256="1v54vhjhavz74bmnppp2cda4qsd57s2vh2j2d3ilwzbycva7kmkl"; depends=[copula doParallel foreach MASS numDeriv R_utils SparseGrid VineCopula]; }; gofMC = derive2 { name="gofMC"; version="1.1.2"; sha256="0hbqx0z2517qgmp6sjg76hv74yrkfbswb9rmfjmsmcyzj2x67w86"; depends=[ggplot2 scales]; }; gofastr = derive2 { name="gofastr"; version="0.3.0"; sha256="02jn4xbbafl7siwvkqns1818wmw813x9cvqfcnpnmcippiqhrb0b"; depends=[data_table quanteda slam SnowballC tm]; }; goft = derive2 { name="goft"; version="1.3.4"; sha256="15n1av7r6w8hihxlgw9pd570qgrlcprkkacln15chvjs3b0i60la"; depends=[fitdistrplus]; }; @@ -7081,14 +7396,15 @@ in with self; { googleCloudStorageR = derive2 { name="googleCloudStorageR"; version="0.4.0"; sha256="1iwn0qjyxyg1xr1s492h7z2g5yzcfw8kasd4ghxmghnqvhzzf7vn"; depends=[assertthat curl googleAuthR httr jsonlite openssl yaml zip]; }; googleComputeEngineR = derive2 { name="googleComputeEngineR"; version="0.2.0"; sha256="1kslsi7gc4na8pm8dyizswf9pfpdq1rprn08rd7kbxsisclbzc7y"; depends=[assertthat future googleAuthR httr jsonlite]; }; googleLanguageR = derive2 { name="googleLanguageR"; version="0.2.0"; sha256="1l0gnynild95k9fw1d398zd4dkws97p13vvfv6jaklqj0xmh9ib8"; depends=[assertthat base64enc googleAuthR jsonlite magrittr purrr tibble]; }; - googlePolylines = derive2 { name="googlePolylines"; version="0.6.1"; sha256="1g28py8amkfq8cgf297w9yv1n26wm2alb6gmcal3i39qfadkdhsv"; depends=[BH Rcpp]; }; + googlePolylines = derive2 { name="googlePolylines"; version="0.7.1"; sha256="194wh92z65g1f4b1a5pdv2jlwkmdr3fjkj9kai993kn7zkpbkpa0"; depends=[BH Rcpp]; }; googlePrintr = derive2 { name="googlePrintr"; version="0.0.1"; sha256="19rm78x8qd61ilc6h1kn3dw63m6dfsckqkd3n76krvi0akgl72w5"; depends=[googleAuthR httr jsonlite]; }; googlePublicData = derive2 { name="googlePublicData"; version="0.16.1"; sha256="15hyslpqvncg21q581h061rfyg99y8lavqw1x8hzl7xzd49bn9r5"; depends=[readxl XML]; }; googleVis = derive2 { name="googleVis"; version="0.6.2"; sha256="1idnp9ndgg2dwybdpw7q3pkaw9kw2vy2xkls9qykrpz1p6nf3mn1"; depends=[jsonlite]; }; - googledrive = derive2 { name="googledrive"; version="0.1.1"; sha256="1fshv85s4ldw2kc7lbbdvrl260pz76z04awx1n6lg0f5xmba9rfg"; depends=[curl glue httr jsonlite purrr rlang tibble uuid]; }; + googledrive = derive2 { name="googledrive"; version="0.1.2"; sha256="04167xqdfj99jp5i1029caah1wy9dpbwm7n543x7fmsik7czc2g5"; depends=[curl glue httr jsonlite purrr rlang tibble uuid]; }; googleformr = derive2 { name="googleformr"; version="0.0.3"; sha256="0smykcjyqmk61ws5jk462l8x5hg0h9nwq55q5pqfgcq1j3yfniqh"; depends=[httr rvest xml2]; }; + googlenlp = derive2 { name="googlenlp"; version="0.2.0"; sha256="0d0g18i3im2s5f14k69ym3vwf9a7zkaval3nwrip97xcl6kf4x9h"; depends=[dplyr httr jsonlite purrr readr rlang]; }; googlesheets = derive2 { name="googlesheets"; version="0.3.0"; sha256="11q07nxys72wkxx9mawmjyf20gvwvrb7h3gpa73h6lgh2vgrwnv8"; depends=[cellranger dplyr httr jsonlite purrr readr stringr tibble tidyr xml2]; }; - googleway = derive2 { name="googleway"; version="2.7.0"; sha256="129yyy21sdbhhffg23jkhs0d6f03di4da5mwgg8x8ckv7r9jraw8"; depends=[curl googlePolylines htmltools htmlwidgets jpeg jqr jsonlite magrittr scales shiny viridisLite]; }; + googleway = derive2 { name="googleway"; version="2.7.1"; sha256="0axpr81p3gdp1nmfn000lk288sdn8z5qmzjvagdxqn5j44hq6sj1"; depends=[curl googlePolylines htmltools htmlwidgets jpeg jqr jsonlite magrittr scales shiny viridisLite]; }; goric = derive2 { name="goric"; version="1.1-0"; sha256="1smjq9vljszgngs5i6x55jwg0imzc5gsfdqxzcs4541fp3pvk999"; depends=[MASS Matrix mvtnorm nlme quadprog]; }; govStatJPN = derive2 { name="govStatJPN"; version="0.1"; sha256="03sywa7rl5rblvv370mfszz5ngp850qf32yydy1fdx10lv5amrfl"; depends=[]; }; gower = derive2 { name="gower"; version="0.1.2"; sha256="1mbrj1lam3jfbby2j32shmmj5cn09zx3rkxbamq7q8sdg39b54gb"; depends=[]; }; @@ -7115,32 +7431,33 @@ in with self; { granova = derive2 { name="granova"; version="2.1"; sha256="161fznqlnwmw53abmg2n62lhxxda7400ljnadvcdvsm8f6kcjf80"; depends=[car]; }; granovaGG = derive2 { name="granovaGG"; version="1.4.0"; sha256="0khqlqc6jg9cpdq06g6jlpfjcw3m6rj40ipljfai8g1630ril6q4"; depends=[ggplot2 gridExtra plyr RColorBrewer reshape2]; }; grapes = derive2 { name="grapes"; version="1.0.0"; sha256="079b7w2xhb0a481s7qihhka0l9ydkjdph0865wjjkcbpr4775p26"; depends=[magrittr]; }; - graphTweets = derive2 { name="graphTweets"; version="0.4.0"; sha256="1zw04s61wjgrx6r6fspp59y5l3bfjf68klcrkp7alaap5dpjsn9a"; depends=[dplyr igraph magrittr purrr reshape2 rtweet splitstackshape]; }; + graphTweets = derive2 { name="graphTweets"; version="0.5.0"; sha256="1j85kvnp9qgs3r1bczcxb2havykalzr444r7a1qbc8swkp4f8llb"; depends=[combinat dplyr igraph magrittr purrr rtweet tidyr zeallot]; }; grapherator = derive2 { name="grapherator"; version="1.0.0"; sha256="071by9b8figbsf4g0f8a8mgcdksjksc57mnlgggilw7py1yjnjlh"; depends=[BBmisc checkmate deldir ggplot2 lhs reshape2 vegan]; }; graphframes = derive2 { name="graphframes"; version="0.1.1"; sha256="1qharg73aaw5xdvkngsxb9wzsgb4xc067cxm20d9yiz4qm7a9050"; depends=[sparklyr tibble]; }; graphicalVAR = derive2 { name="graphicalVAR"; version="0.2.2"; sha256="1jzhqbdylpzc8d28vz2k34i9dpxx5x34bgvx73z8wjglnn6j27b8"; depends=[dplyr glasso glmnet igraph Matrix mvtnorm qgraph Rcpp RcppArmadillo]; }; graphicsQC = derive2 { name="graphicsQC"; version="1.0-8"; sha256="12vg93xfmkv73i19vkb10q2qngmsxd3y42z3l6izdywbdc3cdfkg"; depends=[XML]; }; graphkernels = derive2 { name="graphkernels"; version="1.6"; sha256="1gn3ihqz7m0rdvvc2fp7hsgq583wh5cnz7200a2ff89xc04zs3dc"; depends=[igraph Rcpp RcppEigen]; }; - graphon = derive2 { name="graphon"; version="0.2.0"; sha256="0fdvi2nn7g39mc85jg3rgwyk2wjh2k60pd9lyivfbg3140k1yawh"; depends=[ROptSpace]; }; + graphon = derive2 { name="graphon"; version="0.3.0"; sha256="0w5xgfhshdinwyyb3qc2rhz37w6n0p1clp83dz1vx67n2vbj7wha"; depends=[Rdpack ROptSpace]; }; graphql = derive2 { name="graphql"; version="1.4"; sha256="103vggx9273dg4fkrhik4p1vj8qh7gxavyh933qxhajpmhnfhksh"; depends=[jsonlite Rcpp]; }; graphscan = derive2 { name="graphscan"; version="1.1.1"; sha256="1dgjb0grdymhimdgwnddjcivgy2i9r1i1nni4v9mx0447skcahk9"; depends=[ape rgl snowfall sp]; }; graticule = derive2 { name="graticule"; version="0.1.2"; sha256="1yvrijvyjilfql72dxj32b3sczqv065zj61729wrrzn63xcifvmb"; depends=[raster sp]; }; - grattan = derive2 { name="grattan"; version="1.6.0.0"; sha256="0w8dqnj8di3fm2vp1bz2wdyh207rh9vwqc25mhxg73jjmls8rd33"; depends=[assertthat data_table fastmatch forecast hutils ineq magrittr Rcpp rsdmx zoo]; }; - gravity = derive2 { name="gravity"; version="0.6"; sha256="15ngk6a5f6xjvisk6ma625iaw4ybg7722xgmnr4rnlmsgm95v668"; depends=[censReg glm2 lmtest MASS multiwayvcov sandwich survival]; }; - grec = derive2 { name="grec"; version="1.2.0"; sha256="1djmi5nm4xdxzyikll3wcgfabqr952qqlyxad8frvxy878a85fpw"; depends=[imagine raster]; }; + grattan = derive2 { name="grattan"; version="1.7.0.0"; sha256="1jy3yafymznb2bnjy9njh3sn422vsmmdlzs2is941y3syzji6l84"; depends=[assertthat data_table fastmatch forecast hutils ineq magrittr Rcpp rsdmx zoo]; }; + gravity = derive2 { name="gravity"; version="0.8.5"; sha256="0qsa93sd9vqnkhnd8jgypv48fcaba9hwnpbkpgr5cr57dj1vwxzh"; depends=[censReg dplyr glm2 lmtest magrittr MASS multiwayvcov purrr Rdpack rlang sandwich survival tibble tidyr]; }; + grec = derive2 { name="grec"; version="1.2.2"; sha256="0xr17xq4hvl6zaajj04cwymmpzfnbwb86z0ziarj5bc5wjfw0yb2"; depends=[imagine raster]; }; + gren = derive2 { name="gren"; version="0.0.1"; sha256="1wb5wwdjxi7q36md7xzmbw5lrggcgghkz3pmxipjpxw8kfv804xp"; depends=[glmnet Iso pROC Rcpp RcppArmadillo]; }; greport = derive2 { name="greport"; version="0.7-1"; sha256="1h1g3khb30n3y8l1sxpas2s6s667az4yxvsq42x5dfx8fic42p6n"; depends=[data_table Formula ggplot2 Hmisc lattice latticeExtra rms survival]; }; greta = derive2 { name="greta"; version="0.2.3"; sha256="10vli747b5a1m53qszxk91wppg9511la9yc823qrr51s92z8i222"; depends=[coda progress R6 reticulate tensorflow]; }; grex = derive2 { name="grex"; version="1.8"; sha256="0z81dlzk5vv51nwhfiijzpxgf71m4fsrfqzrbxx2kyf3f8c9xg1r"; depends=[]; }; - greybox = derive2 { name="greybox"; version="0.2.2"; sha256="1kgxcg9502gn766p4qvdbixi25gc81xg49wlzv02gcsqf2nzrl1c"; depends=[forecast lamW]; }; + greybox = derive2 { name="greybox"; version="0.3.2"; sha256="1vqkq015qzlqqajhxswiqikaw4ykjs5rasdwyjxj2ggq1ks78px8"; depends=[forecast lamW nloptr numDeriv]; }; greyzoneSurv = derive2 { name="greyzoneSurv"; version="1.0"; sha256="115i0d4fy4p4g4vd419hj9f23hi8cbiyfilgpgmag91ilr1xpcdp"; depends=[Hmisc survAUC survival]; }; - grf = derive2 { name="grf"; version="0.10.0"; sha256="1pfpgnnzqasai797kizmpv4sgr0i38amppmqwba22rs5mrz72c9w"; depends=[DiceKriging Matrix Rcpp RcppEigen sandwich]; }; + grf = derive2 { name="grf"; version="0.10.1"; sha256="03i6gidz4jrwqcc60c4gv0l83d5ckm5pg5vm8bgbxc6dbg1636z3"; depends=[DiagrammeR DiceKriging lmtest Matrix Rcpp RcppEigen sandwich]; }; gridBase = derive2 { name="gridBase"; version="0.4-7"; sha256="09jzw4rzwf2y5lcz7b16mb68pn0fqigv34ff7lr6w3yi9k91i1xy"; depends=[]; }; gridDebug = derive2 { name="gridDebug"; version="0.5-0"; sha256="12zrl7p8p7071w5viymdipycja7a2arvy0aahgahd5nlx1k1gha0"; depends=[graph gridGraphviz gridSVG]; }; gridExtra = derive2 { name="gridExtra"; version="2.3"; sha256="0fwfk3cdwxxim7nd55pn7m31bcaqj48y06j7an2k1v1pybk0rdl1"; depends=[gtable]; }; gridGraphics = derive2 { name="gridGraphics"; version="0.3-0"; sha256="1p94flvq5h3x817pl1m0aj3sim87x6zdbpv9xrgdnqw3rxfzwgqs"; depends=[]; }; gridGraphviz = derive2 { name="gridGraphviz"; version="0.3"; sha256="1jz0d6kc8ci55ffm6dns8bhak9xnaq7mg5mpv3fk53lircn7mwl5"; depends=[graph Rgraphviz]; }; gridSVG = derive2 { name="gridSVG"; version="1.6-0"; sha256="06nxp0h6clsfxcx5lf11sgzq7v4ijbynh6hldbnpm6pqwn18hb0j"; depends=[jsonlite XML]; }; - gridsample = derive2 { name="gridsample"; version="0.2.0"; sha256="0hpfhkma60h59z3akjqs7igs6zg00xs3jlq3sm48gxbjrk7fb5sm"; depends=[data_table deldir geosphere maptools raster rgdal rgeos sp spatstat spatstat_utils]; }; + gridsample = derive2 { name="gridsample"; version="0.2.1"; sha256="062aryy26x07m31r6m0fj1zgnjhivlh1fikx9lv2rdgk0rh4yzz0"; depends=[data_table geosphere maptools raster rgdal rgeos sp spatstat spatstat_utils]; }; gridsampler = derive2 { name="gridsampler"; version="0.6"; sha256="0wqpqg9c372sv8zqks6v93gawiyfghw58hn7m8q45dxpqm16ss3k"; depends=[BiasedUrn ggplot2 plyr reshape2 shiny shinyBS shinythemes]; }; grnn = derive2 { name="grnn"; version="0.1.0"; sha256="1dxcmar42g9hz4zlyszlmmnnsnja0gxfggav5jxv0gkp32rkd0wh"; depends=[]; }; groc = derive2 { name="groc"; version="1.0.6"; sha256="0x7rrf5bw05s257xhzklpc6hslpjnzjx02hlrz4r9zixbfffmawc"; depends=[MASS mgcv pls robust robustbase rrcov]; }; @@ -7150,19 +7467,19 @@ in with self; { groupdata2 = derive2 { name="groupdata2"; version="1.0.0"; sha256="11j5p3afr5qc227ljdwwwp17jzaylqlhc7g0gr3jvgrhjnijs2a0"; depends=[dplyr numbers plyr]; }; grouped = derive2 { name="grouped"; version="0.6-0"; sha256="1glxgacpwk7yjbkwg5ci6bmb2il6hf5zhydwi5bbq6hc032m9976"; depends=[MASS]; }; groupedSurv = derive2 { name="groupedSurv"; version="1.0.3"; sha256="15ah8v1mfyq9xi27kkl0vwwbhf16vd4hy9h809jlw1i7b1zwg4pm"; depends=[BH doParallel doRNG foreach qvalue Rcpp RcppEigen]; }; - groupedstats = derive2 { name="groupedstats"; version="0.0.1"; sha256="19rdn86zzv40f0ha0q043wj538scbj1x2j80bwllcbl78cmpq3i3"; depends=[broom crayon dplyr glue magrittr purrr rlang robust rstudioapi sjstats skimr tibble tidyr]; }; + groupedstats = derive2 { name="groupedstats"; version="0.0.3"; sha256="026z5gj1ghnc1y38k4s33b3m2wmm9kdxf62aa90rg0xgq6gc9061"; depends=[broom broom_mixed crayon dplyr glue lme4 magrittr purrr rlang robust rstudioapi sjstats skimr tibble tidyr]; }; groupsubsetselection = derive2 { name="groupsubsetselection"; version="1.0.3"; sha256="118cj5xc8nbq4fs2gbzg1nhynixaflbl0si77gyy4ybw0drsz4nj"; depends=[]; }; grove = derive2 { name="grove"; version="1.1"; sha256="0fqsj5dx7py7cin3hvfkxglh8v3x0dwj6cxy4h5vbddjl687db5x"; depends=[Rcpp RcppArmadillo wavethresh]; }; growcurves = derive2 { name="growcurves"; version="0.2.4.1"; sha256="0h96c1hd6cdzc2l2a9dakmxn2hspvr0fpx9938iscm4hi9ds97m2"; depends=[Formula ggplot2 Rcpp RcppArmadillo reshape2]; }; growfunctions = derive2 { name="growfunctions"; version="0.14"; sha256="1pvyiw20fxm3l4giyq4iizc67yy36i6wq4ch2qyqg4mfd4bki2g4"; depends=[ggplot2 mvtnorm Rcpp RcppArmadillo reshape2 spam]; }; growth = derive2 { name="growth"; version="1.1.0"; sha256="0d1hc56ybp5chckqv5q5jvpgbl7xn9dkbc4dd4sz5gawn1hngbxm"; depends=[rmutil]; }; - growthcurver = derive2 { name="growthcurver"; version="0.2.1"; sha256="0q70g940ggpwnx2cpq2j8ambfbj9sqw6ivyp9cya1nbn05bah9ds"; depends=[caTools minpack_lm]; }; + growthcurver = derive2 { name="growthcurver"; version="0.3.0"; sha256="0q7g00b9sxxlq8yscmmccr8r4mwzpc707arbrr46iii8ra9icvlb"; depends=[minpack_lm]; }; growthmodels = derive2 { name="growthmodels"; version="1.2.0"; sha256="1wy5z77819s3daa0mifafcjfkggsq0ac522yagj86ml3vf7yqppj"; depends=[]; }; growthrate = derive2 { name="growthrate"; version="1.3"; sha256="1ak3yqlm7dnkdjlmikwa57qnf7yd9n1ixz36gv3shr252750x9cd"; depends=[clime Matrix mvtnorm]; }; growthrates = derive2 { name="growthrates"; version="0.7.2"; sha256="1szyc85gi0wgg98br53lxqpamic1srvfiyq1m818j38xnlyj1lxw"; depends=[deSolve FME lattice]; }; grpSLOPE = derive2 { name="grpSLOPE"; version="0.2.1"; sha256="1r9irf83f7szhkdqis2rakil8fsr3rqsfrj4dmbg3r3rnr8wl8nh"; depends=[SLOPE]; }; - grplasso = derive2 { name="grplasso"; version="0.4-5"; sha256="15bqckq9qjdlllhfpb21vzgi9msbl544alkrz01w1vvb3hk1847y"; depends=[]; }; - grpreg = derive2 { name="grpreg"; version="3.1-4"; sha256="0lxr83imsg3g9nk2cmvmg6mying23f05f5q2xniiqvayrd7i4ii9"; depends=[Matrix]; }; + grplasso = derive2 { name="grplasso"; version="0.4-6"; sha256="0xr6plgnc3lp93rd4jk4dqjix8kgl8s2b68fh41k6jwd5y8d7pks"; depends=[]; }; + grpreg = derive2 { name="grpreg"; version="3.2-0"; sha256="0jvkdmhm7q22z7faz1k8n87jw3f16bqr7yqmj2nqap1ha7c1ib8m"; depends=[Matrix]; }; grpregOverlap = derive2 { name="grpregOverlap"; version="2.2-0"; sha256="1kq8wxpx21irwckndgfkzdy5jgzf7pmcwpclmjzjxznv6cyaikd0"; depends=[grpreg Matrix]; }; grpss = derive2 { name="grpss"; version="3.0.1"; sha256="01bjjhv3vkvn5h363g5a9dlm7kzq10q7ixmrc0kkq5hsbs31vl3x"; depends=[doParallel foreach grpreg MASS]; }; grr = derive2 { name="grr"; version="0.9.5"; sha256="0arbcgrvhkwb5xk4nry1ffg2qj0v8ivhjghdr505ib4357g0c9i9"; depends=[]; }; @@ -7186,7 +7503,7 @@ in with self; { gstat = derive2 { name="gstat"; version="1.1-6"; sha256="0snvga824v1kbd3xp46652bv6drfrgkjsi5zrbdcliqpqz79wk9f"; depends=[FNN lattice sp spacetime zoo]; }; gsubfn = derive2 { name="gsubfn"; version="0.7"; sha256="00j6b8b6xsx6v370h220x233rpk6asca78165y3d48jpwvwisdc9"; depends=[proto]; }; gsw = derive2 { name="gsw"; version="1.0-5"; sha256="0lv4x4is53xybgg205dncizpnqnakqk47b5wgys2kr4ixqc8jipb"; depends=[testthat]; }; - gsynth = derive2 { name="gsynth"; version="1.0.6"; sha256="0fzdlflrl9qlvbzjdspws3naabwyphwqys01wp4wkw5y7whq0mar"; depends=[abind doParallel foreach GGally ggplot2 mvtnorm Rcpp RcppArmadillo]; }; + gsynth = derive2 { name="gsynth"; version="1.0.9"; sha256="1m9s3gymm0z6frfzmz7kv8cbdnla2vp4aam5b2zzcxwflzwbplm3"; depends=[abind doParallel foreach GGally ggplot2 MASS mvtnorm Rcpp RcppArmadillo]; }; gt4ireval = derive2 { name="gt4ireval"; version="2.0"; sha256="1d567iz57xqszm45l1wq4n2qrrmyz8ssll1vllfmncb9ibbnx4f3"; depends=[]; }; gtWAS = derive2 { name="gtWAS"; version="1.0.0"; sha256="1pk7m1apgksbh8a3xb94aj3wp9dbcv5rm6brdcjb5fsgxj7iaq5c"; depends=[]; }; gtable = derive2 { name="gtable"; version="0.2.0"; sha256="0vz7073m0a2q12qzzihrfh5c2kx5jqi5l7z470fxmwqghdllh7l0"; depends=[]; }; @@ -7195,13 +7512,12 @@ in with self; { gtheory = derive2 { name="gtheory"; version="0.1.2"; sha256="1xc1jl69z5csalqk3hx83s53awcl1fjq6p0x2pczhs7dsvwd6lks"; depends=[lme4]; }; gtools = derive2 { name="gtools"; version="3.8.1"; sha256="0f5syk1qq6cjq6hwymvkiyhzwa389z94722v881ipbfqkd2q8505"; depends=[]; }; gtop = derive2 { name="gtop"; version="0.2.0"; sha256="1nvvbf181x0miw3q0r2g0nklz29ljdsd07cazaajfls7pmhi0xw9"; depends=[hts lassoshooting quadprog]; }; - gtrendsR = derive2 { name="gtrendsR"; version="1.4.1"; sha256="08zfh73viv9p1c4qmw3jnywa5xzbm39kfi60whl0w5pvh3q9pksf"; depends=[anytime curl ggplot2 jsonlite]; }; - gtsf = derive2 { name="gtsf"; version="0.1.0"; sha256="11b1rgqzyywpk0qjm575l98irbifgkdlfhhynccils5y8f7vyhf8"; depends=[assertthat dplyr magrittr readr rlang sf stringr tibble]; }; + gtrendsR = derive2 { name="gtrendsR"; version="1.4.2"; sha256="1rph2iv9dirzw1acgq7n56ra20jdynq99biah5v6nybmxdbmznzd"; depends=[anytime curl ggplot2 jsonlite]; }; gtx = derive2 { name="gtx"; version="0.0.8"; sha256="0x71jji2yldi9wpx8d3nldbjfj4930j7zcasayzbylf9094gmg26"; depends=[survival]; }; guess = derive2 { name="guess"; version="0.1"; sha256="198pxi0yipgm9wccpj3y4a0gkibhyxcmb7v5dz7ipzrk44ha5g6j"; depends=[Rsolnp]; }; - gumbel = derive2 { name="gumbel"; version="1.10-1"; sha256="12rkri8bvgjn0ylf1i4k9vpb8mvbasidvx2479kmis2rc1p07qq7"; depends=[]; }; + gumbel = derive2 { name="gumbel"; version="1.10-2"; sha256="0s9idcrssnl683abwky9zvqylciy0b51z935yfvb2bm8b0b0b4ij"; depends=[]; }; gunsales = derive2 { name="gunsales"; version="0.1.2"; sha256="02vz16lhym72vvf48yai1g371wygdlmi63a6ylc147l0b69jgw31"; depends=[data_table dplyr ggplot2 seasonal x13binary zoo]; }; - gustave = derive2 { name="gustave"; version="0.3.0"; sha256="1vijf5x07l507r0li6hs0hhxia83llpykllcrkhm00ms5na7p4jz"; depends=[MASS Matrix]; }; + gustave = derive2 { name="gustave"; version="0.4.0"; sha256="1swnkb1134mnlnfpdchyhmrhr0r5nw90yczsg52hwbhj8hjl2axp"; depends=[Matrix]; }; gutenbergr = derive2 { name="gutenbergr"; version="0.1.4"; sha256="1xf9h0ikfzgq6bzzxa7wih29cgbfk6lgdv041fprxbd9rz38agi9"; depends=[dplyr lazyeval purrr readr stringr urltools]; }; gvc = derive2 { name="gvc"; version="0.5.2"; sha256="0cfvli6ap5kw3agv94d7g7rhmlxd66yyngc7c9pl4fsxf7sm6nx4"; depends=[decompr diagonals]; }; gvcR = derive2 { name="gvcR"; version="0.1.0"; sha256="0r54924b9a65k11p8y3p7jxbvmpb7s7vs87v65hhl98gxacj5hk8"; depends=[dplyr eda4treeR lme4 magrittr]; }; @@ -7214,28 +7530,31 @@ in with self; { gwrr = derive2 { name="gwrr"; version="0.2-1"; sha256="1fjk217pimnmxsimqp9sn02nr1mwy3hw3vsr95skbfsd6vdda14d"; depends=[fields lars]; }; gym = derive2 { name="gym"; version="0.1.0"; sha256="0vcwzgawqwjsf65hr1mbjkz3px8zsibfkn42jpsg39n13jpfjq8v"; depends=[httr jsonlite]; }; gyriq = derive2 { name="gyriq"; version="1.0.2"; sha256="12vbnhianzi4l43czaxrbnbkz1h8lvmwjys0y3c2ml3g6dmwwfji"; depends=[CompQuadForm irlba mvtnorm survival]; }; - h2o = derive2 { name="h2o"; version="3.20.0.2"; sha256="1pchml5d8py4cnii5lmmw65cglixvgwgvl592kl3ix09w34grsps"; depends=[jsonlite RCurl]; }; + h2o = derive2 { name="h2o"; version="3.20.0.8"; sha256="17piklf91fmpf7bl4sk300bwnvsxljad925whs2h12xhqgw3amgv"; depends=[jsonlite RCurl]; }; h2o4gpu = derive2 { name="h2o4gpu"; version="0.2.0"; sha256="06d2rrr27xvnsai6zjiaiw0jjfzdza1cc39c03d6pjkvnh0mqh2c"; depends=[magrittr reticulate]; }; h5 = derive2 { name="h5"; version="0.9.9"; sha256="14p7i1sj24ky87kd7qr3n9fc9l64s0bp0rwbyl6i2x69xn75gpsx"; depends=[Rcpp]; }; - hBayesDM = derive2 { name="hBayesDM"; version="0.5.0"; sha256="174z98jvi04df04lpdxh3j8lmjvgrg287nxfnrcvjkibc0jiss4m"; depends=[ggplot2 loo Rcpp rstan rstantools]; }; - hIRT = derive2 { name="hIRT"; version="0.1.2"; sha256="0pqp6bycr13di1hbi5sqnkiannz2hyg0ysshswv2i9fp0vkhdhqf"; depends=[pryr rms]; }; - hNMF = derive2 { name="hNMF"; version="0.6"; sha256="0a6wf9mhv3b7wb8kimjqm1sj9k8d2j98p7i707bgn5hvmyc39bnf"; depends=[MASS NMF nnls oro_nifti R_matlab rasterImage spatialfil]; }; + hBayesDM = derive2 { name="hBayesDM"; version="0.6.0"; sha256="0il3w1vlw8p02lq5svymv5qafmal784c037dbjk1f6j96lg7i69f"; depends=[ggplot2 loo Rcpp rstan rstantools]; }; + hIRT = derive2 { name="hIRT"; version="0.1.3"; sha256="12rg4srh9s6a72gvb5f7qn9zar6yaqa7p0mfmazfqj353icrannd"; depends=[pryr rms]; }; + hNMF = derive2 { name="hNMF"; version="0.9"; sha256="0qavavgiqah4dv0gz8v5ssz637sd341n9s0pyc232n2jhqpzl0cz"; depends=[MASS NMF nnls oro_nifti R_matlab rasterImage spatialfil]; }; hR = derive2 { name="hR"; version="0.1.3"; sha256="0s7c2aiq58c2zmv25m42cxp5chzkp5grz5bjqrknfkwjy21679h1"; depends=[data_tree reshape2]; }; hSDM = derive2 { name="hSDM"; version="1.4"; sha256="1jq6hdnyv446ng62srip0b48kccf0qw3xqym3fprg74mjdy3inqr"; depends=[coda]; }; haarfisz = derive2 { name="haarfisz"; version="4.5"; sha256="1qmh4glwzqwqx3pvxc71rlcimp1l0plgdf380v9hk0b4gj7g3pkf"; depends=[wavethresh]; }; + hablar = derive2 { name="hablar"; version="0.1.0"; sha256="0l7xb2z41ddm1dlq3f0k00wdskai17wcwfkia1y1k88vqjcakpzg"; depends=[dplyr]; }; hail = derive2 { name="hail"; version="0.1.1"; sha256="1nrc9msqyy5iq2i6p8875anbqswxl2z6vdd4hvihnl22qh5fnbvh"; depends=[]; }; hamlet = derive2 { name="hamlet"; version="0.9.6"; sha256="076fh28grlrv38qywshi79m84jsz1ck9k4n0rg4svvr3gqkdbcn2"; depends=[]; }; hansard = derive2 { name="hansard"; version="0.6.0"; sha256="13h68b300c4lkqbl5gw4hkqcbb2ikvan4hx8092ds995514rg4x8"; depends=[dplyr httr jsonlite lubridate stringi tibble tidyr]; }; hapassoc = derive2 { name="hapassoc"; version="1.2-8"; sha256="0qs5jl0snzfchgpp6pabncwywxcmi743g91jvjiyyzw0lw85yv4s"; depends=[]; }; haplo_stats = derive2 { name="haplo.stats"; version="1.7.9"; sha256="19kxascqq5qz0zdxx0w837ji207y1z2ggxkl4vmlbay03k2dw2mx"; depends=[rms]; }; - haploR = derive2 { name="haploR"; version="2.0.3"; sha256="0m2pqrg1734x2ab19dqf5mqgrzibd2l5g6800if0a92bi51q67bx"; depends=[DT httr plyr RUnit tibble XML]; }; + haploR = derive2 { name="haploR"; version="2.0.6"; sha256="0f0i687wrsmli1z48vghwbd4595nwvv2bajnn0jkyi9fw9r2vnn0"; depends=[DT httr plyr RUnit tibble XML]; }; haploReconstruct = derive2 { name="haploReconstruct"; version="0.1.2"; sha256="17zdl9c3yy6jdzv1wp0ailbga456pmmybzxh3dldymhj8qf32cx0"; depends=[data_table dbscan foreach gplots igraph matrixStats stringi zoo]; }; haplotyper = derive2 { name="haplotyper"; version="0.1"; sha256="0pcshlh29c4zazhkcq4371kqh9inrbx494y5a1qb1k2c92fkax31"; depends=[]; }; haplotypes = derive2 { name="haplotypes"; version="1.0"; sha256="0pwihfi6g4jrnkha9s9rksq0fc8j04mlrwf0295rmy49y19rg84s"; depends=[network]; }; happybiRthday = derive2 { name="happybiRthday"; version="0.0.1"; sha256="0rrvi5kx09p74xwxvqcwibbh4qjlk4jxb89grx74chjxk9ak2yv8"; depends=[data_table dplyr gh lubridate tidyr]; }; + happytime = derive2 { name="happytime"; version="0.1.0"; sha256="03iblwb6w2dh9sibfi4nlswidck13hzsn7123838zp4sxfnrp041"; depends=[]; }; hapsim = derive2 { name="hapsim"; version="0.31"; sha256="0jw6iw89d4y8wjy58biv40szp123ql7frz1mmdjdxljmwaby963h"; depends=[MASS]; }; harmonicmeanp = derive2 { name="harmonicmeanp"; version="1.0"; sha256="071ysgyi8daq8q1vqzgypkz4bgaxr0iw4djv906vkfx5ywihr768"; depends=[FMStable]; }; harrietr = derive2 { name="harrietr"; version="0.2.3"; sha256="0n6vsqysj4ijh06z6nqmj8x1z4w9711dxhbfp8p8fwi0l75pj0cj"; depends=[ape dplyr ggtree lazyeval magrittr rlang tidyr]; }; + harrypotter = derive2 { name="harrypotter"; version="0.1.0"; sha256="0h02rli2l42a2vjgrw7fqxib31pyqcyhqam499bpybk5crqnpffx"; depends=[ggplot2 gridExtra MASS]; }; harvestr = derive2 { name="harvestr"; version="0.7.1"; sha256="0xgxzbfbc33asfm8sl2y60ki6bwgd6vdh9nz466crkx7m9lsvll8"; depends=[digest foreach plyr]; }; hash = derive2 { name="hash"; version="2.2.6"; sha256="0mkx59bmni3b283znvbndnkbar85fzavzdfgmwrhskidsqcz34yz"; depends=[]; }; hashFunction = derive2 { name="hashFunction"; version="1.0"; sha256="1v57xj8xwv6xhxvgp0zxgvs5vcjw8z5k2ciwbn0jxf4ilyd66cgj"; depends=[]; }; @@ -7258,29 +7577,32 @@ in with self; { hda = derive2 { name="hda"; version="0.2-14"; sha256="0azfxyws7yslcqplfddmdp5ngk91j5h7llvrg77yh5z0kkd09j1b"; depends=[e1071]; }; hdbinseg = derive2 { name="hdbinseg"; version="1.0.1"; sha256="0fy9cqrygsnxkb3nxg56md19svrvkbijpxkqfk9p18cj5ibwrq94"; depends=[doParallel foreach iterators Rcpp RcppArmadillo]; }; hddplot = derive2 { name="hddplot"; version="0.59"; sha256="18llkpawm12cjxlcrlra60m16virfpjqiaqkvy9mb3wq1zif61rh"; depends=[MASS multtest]; }; - hdf5r = derive2 { name="hdf5r"; version="1.0.0"; sha256="1s6p4cj909kc635fh5xpl87bqlcdj3dn3r1wk5g40abimk2b0pva"; depends=[bit64 R6]; }; + hddtools = derive2 { name="hddtools"; version="0.8.2"; sha256="02gbqlzwxc77gllgz9sf2s73y4ngyb4warabdfyj2sm2g7jl6y12"; depends=[gdata Hmisc raster RCurl rgdal rnrfa sp stringr tibble XML zoo]; }; + hdf5r = derive2 { name="hdf5r"; version="1.0.1"; sha256="0h222q80li8rs3cv4c5lvv3g91ygd51w43ay6fwyk9q9d315vwrj"; depends=[bit64 R6]; }; hdi = derive2 { name="hdi"; version="0.1-6"; sha256="1lzy4jcz14j1qi6z4j1sq7z3z75n8jygnzlvqjf45vn1sqil17cq"; depends=[glmnet linprog MASS scalreg]; }; hdlm = derive2 { name="hdlm"; version="1.3.1"; sha256="1zl6bksw0apkmn5shf8qjpxjyx6vb40dc4m4db76hhn5nhcp10ic"; depends=[foreach glmnet iterators MASS Matrix]; }; hdm = derive2 { name="hdm"; version="0.2.3"; sha256="0nj7pbkygzbiraw1b3pqv3bnkjhi1a0h48q0zgkcq8y79kj2f8cl"; depends=[checkmate Formula ggplot2 glmnet MASS]; }; - hdme = derive2 { name="hdme"; version="0.2.0"; sha256="03fmn7yxgx56329923pzqkjfrdg0aw2i7jj1sdf0cphzmi7m426n"; depends=[ggplot2 glmnet Rcpp RcppArmadillo Rdpack]; }; + hdme = derive2 { name="hdme"; version="0.2.1"; sha256="0kcpc0ygjk8d6v099x1m5hi6dbapjcc0lzjsg9779i6bbf43mls2"; depends=[ggplot2 glmnet Rcpp RcppArmadillo Rdpack]; }; hdnom = derive2 { name="hdnom"; version="5.0"; sha256="0g7l5km18j11qfw8iq9ybl8lzdq6fk2g7cjc2yjsm3ava60n4xqh"; depends=[foreach ggplot2 glmnet gridExtra ncvreg penalized rms survAUC survival]; }; hdpca = derive2 { name="hdpca"; version="1.0.0"; sha256="1sv7caw4nhpcvsb7fxpvf2b5zskvfsv004hrqc51b5jx4fsc7y92"; depends=[boot lpSolve]; }; hdrcde = derive2 { name="hdrcde"; version="3.2"; sha256="1901mg2k2ch9fzn1n9k0kmxkgd1m4pxvrda7mv0mp64nf4mx43xw"; depends=[ash ggplot2 KernSmooth ks locfit RColorBrewer]; }; hds = derive2 { name="hds"; version="0.8.1"; sha256="1smg5ixrl7f2x3wn7s5i26dyadn5sigpf4jsk236z1bhnz617ax4"; depends=[survival tensor]; }; - healthcareai = derive2 { name="healthcareai"; version="2.1.0"; sha256="1bzlgdf3gfgayw0axiwhbm9x2rqfyibkwymw2mm28fdz65r4n73i"; depends=[broom caret cowplot data_table dbplyr dplyr e1071 ggplot2 glmnet lubridate MLmetrics purrr ranger recipes rlang stringr tibble tidyr xgboost]; }; + healthcareai = derive2 { name="healthcareai"; version="2.2.0"; sha256="1i1xnxd2v8qbv8pqn7w3ivh1yv4nvxm5llwhxd24gfzqkxck7c3w"; depends=[broom caret cowplot data_table dbplyr dplyr e1071 ggplot2 glmnet lubridate MLmetrics purrr ranger recipes rlang ROCR stringr tibble tidyr xgboost]; }; heatex = derive2 { name="heatex"; version="1.0"; sha256="0c7bxblq24m80yi24gmrqqlcw8jh0lb749adsh51yr6nzpap6i9n"; depends=[]; }; heatmap_plus = derive2 { name="heatmap.plus"; version="1.3"; sha256="0rzffm15a51b7l55k0krk6w7v8czy3vpwz1qmbybr7av0pln7wn3"; depends=[]; }; heatmap3 = derive2 { name="heatmap3"; version="1.1.1"; sha256="14zkij0gr9awzic71k2j7pniamkywfvwrifdk7jbds70zsi30ph5"; depends=[fastcluster]; }; heatmapFit = derive2 { name="heatmapFit"; version="2.0.4"; sha256="1rswp1wp58f21fpyjybcvvmnn53kr54ij83hp05qbvl7yn1fsnrb"; depends=[]; }; - heatmaply = derive2 { name="heatmaply"; version="0.15.0"; sha256="0314nmlfwvgb9xmfvnw15l4is59dq1yq8i9461bykhj26jppyib2"; depends=[assertthat colorspace dendextend ggplot2 gplots htmlwidgets magrittr plotly RColorBrewer reshape2 scales seriation viridis webshot]; }; - heatwaveR = derive2 { name="heatwaveR"; version="0.3.0"; sha256="1pfbhjnky0403hwjy29ady4q41vsgk3m3mwdki5ybkp9hx0c3zm3"; depends=[data_table dplyr ggplot2 lubridate Rcpp RcppArmadillo RcppRoll tibble zoo]; }; + heatmaply = derive2 { name="heatmaply"; version="0.15.2"; sha256="0h8s5djzj4mrmaswlcaap6jbwxrkbzc43bbqik3qf8vrqz335w04"; depends=[assertthat colorspace dendextend ggplot2 gplots htmlwidgets magrittr plotly RColorBrewer reshape2 scales seriation viridis webshot]; }; + heatwaveR = derive2 { name="heatwaveR"; version="0.3.3"; sha256="0j2p1lndzsp90hcnf2w4wn3brjs1si1ag1qk8n1jxy3c3wlapiak"; depends=[data_table dplyr ggplot2 lubridate Rcpp RcppArmadillo RcppRoll tibble zoo]; }; heavy = derive2 { name="heavy"; version="0.38.19"; sha256="15bg2qqkslkqfnsq3ixbgmq72xagh8laji0265l06xgf2l6045kx"; depends=[]; }; + hedgehog = derive2 { name="hedgehog"; version="0.1"; sha256="1mvjnm2zlc4pvw9vnhxr0dj1g1sfqvlrnnhcipzfbvr147yan9l5"; depends=[rlang testthat]; }; heemod = derive2 { name="heemod"; version="0.9.2"; sha256="0qln5c4m11vxpsa0l07qrzs006b05hsl342pc5dgz0hwdpn5dd9j"; depends=[dplyr ggplot2 lazyeval memoise mvnfast plyr pryr tibble]; }; hei = derive2 { name="hei"; version="0.1.0"; sha256="1cvwdkm5c9p3cfgpgdj0r7222mzz1jghq2i5f20xh3786gx05sqd"; depends=[nhanesA]; }; heims = derive2 { name="heims"; version="0.4.0"; sha256="0vnq31jwn09grni4gdhf1hzd87b62as4f65b2qw7ky6mi38ahr5d"; depends=[bit64 data_table fastmatch hutils lubridate magrittr]; }; helixvis = derive2 { name="helixvis"; version="0.9.1"; sha256="1xc55wyky3gnbs4gkmn1v74vgj4azriwlyd4psmc644w0rnajfjc"; depends=[plotrix]; }; hellno = derive2 { name="hellno"; version="0.0.1"; sha256="1j787rw9hh75bvkckmlz5xkgwc22gd7si3mgjd7v60dd6lykfa88"; depends=[]; }; helloJavaWorld = derive2 { name="helloJavaWorld"; version="0.0-9"; sha256="1a8yxja54iqdy2k8bicrcx1y3rkgslas03is4v78yhbz42c9fi8s"; depends=[rJava]; }; + helminthR = derive2 { name="helminthR"; version="1.0.6"; sha256="0h4r0f6aaxh0bgcmrvbsh7vkw2jhw1xqnnx9bzqai0s842697m88"; depends=[ggmap httr knitr magrittr plyr rmarkdown rvest xml2]; }; helsinki = derive2 { name="helsinki"; version="0.9.29"; sha256="0bn5iyxjn9qs6f0dmhv51ssayywbx1rayh80zbzk0gsm94nhs0d9"; depends=[maptools RCurl rjson sp]; }; heplots = derive2 { name="heplots"; version="1.3-5"; sha256="1vyhfkp66gi17jni3gsbv9kn1s0n00qigr13q8xbzbgylz5jjiln"; depends=[car MASS]; }; here = derive2 { name="here"; version="0.1"; sha256="1vb5dxqdpimy51q1gjsypyq14p2hhvj7wsvh6g35pj1g03cyg9av"; depends=[rprojroot]; }; @@ -7289,7 +7611,7 @@ in with self; { hermite = derive2 { name="hermite"; version="1.1.2"; sha256="0j9s7ayvbvmgwybrvf703b72qbn8gskb105pis19ig2sslllzda3"; depends=[maxLik]; }; hesim = derive2 { name="hesim"; version="0.1.0"; sha256="002phncl1glv3c3gwp9ifpk56j06rka26a3774xlj3zcs6izglns"; depends=[data_table Rcpp RcppArmadillo]; }; het_test = derive2 { name="het.test"; version="0.1"; sha256="08kxp81dx32anh0k5b65x7w7madwnn9hiabdrk6ck6b6mx37x26v"; depends=[vars]; }; - hetGP = derive2 { name="hetGP"; version="1.0.2"; sha256="0dffkn11pm1x5jafc7yzy0jh4c2qqipfzhw205qiqxk5gny185k8"; depends=[DiceDesign MASS Rcpp]; }; + hetGP = derive2 { name="hetGP"; version="1.1.0"; sha256="1m752a250msayqz8kwdi1r6lrww9pmc6qb6l9hlnfl2ds3qiks83"; depends=[DiceDesign MASS Rcpp]; }; hetmeta = derive2 { name="hetmeta"; version="0.1.0"; sha256="023bdjsv0ibisz47vaap9yamzjna4hhndk3haw2g1cm92wnrdra5"; depends=[metafor]; }; hett = derive2 { name="hett"; version="0.3-2"; sha256="1kmspw0738pdall5scmllsa79dynliai2glk1h5rzm4030r5rd6j"; depends=[lattice MASS]; }; heuristica = derive2 { name="heuristica"; version="1.0.1"; sha256="1myivlqw6a8wh97ma9lrpgvaqb0vn4kj8yp9r4z5vc4pxgmm48g6"; depends=[Hmisc]; }; @@ -7300,11 +7622,12 @@ in with self; { hflights = derive2 { name="hflights"; version="0.1"; sha256="1rb6finck13i6949i6hsgfk90q4ybxh1m3is2mlw2m6087bpzfbd"; depends=[]; }; hgam = derive2 { name="hgam"; version="0.1-2"; sha256="1flcc67n8kbh9m5phdfl587xg1x935zbp305y0gdmkc8vpkiwpcf"; depends=[grplasso lattice rgl]; }; hglasso = derive2 { name="hglasso"; version="1.2"; sha256="1qq41ma33wz7qjs5zx72yvngpsiq62z9sd6d5hvvl83brq0fcr4b"; depends=[fields glasso igraph mvtnorm]; }; - hglm = derive2 { name="hglm"; version="2.1-1"; sha256="1vr1332db60fqbck0nplfw5dnxpb7sa3irh80k2hyx4aw74ckr2k"; depends=[hglm_data MASS Matrix]; }; + hglm = derive2 { name="hglm"; version="2.2-0"; sha256="0gb61yb1kk4dsb4i6sdh0r2ba7byl7hm5fqy8f12v1l4q40ymwq7"; depends=[hglm_data MASS Matrix]; }; hglm_data = derive2 { name="hglm.data"; version="1.0-0"; sha256="1hrq1jac658z5xjsg03nfkb4kwm9z44bhciv5chk74ww8gjr9j9q"; depends=[MASS Matrix]; }; hgm = derive2 { name="hgm"; version="1.17"; sha256="11hv4pfv3gqiargvwvrxqzfji75j291w1nilawf8yjc3isnc4wjp"; depends=[deSolve]; }; + hgutils = derive2 { name="hgutils"; version="0.2.3"; sha256="12y2wxyvd4kjc548baha5mfn3r4ci4a0cyr7d8wh5hldsz6vkg08"; depends=[crayon limSolve magrittr stringr XML]; }; hhh4contacts = derive2 { name="hhh4contacts"; version="0.13.0"; sha256="17f31xhh6kk7sx5d5dvpwpvl72wd45zgb4fcpdayx3yrm719csz9"; depends=[surveillance]; }; - hhi = derive2 { name="hhi"; version="1.1.0"; sha256="0f0b6a2zr2nipcx4p8n2wx088kndh6bd150f80619kjfizr55x2d"; depends=[ggplot2]; }; + hhi = derive2 { name="hhi"; version="1.2.0"; sha256="1yl52c3nqdi8v60sr01l0vv8359803dm2i4c9ifazgj3h3a4h0yp"; depends=[ggplot2]; }; hht = derive2 { name="hht"; version="2.1.3"; sha256="022a8zz2m34q89h29jglfj21knlqd8dwi85qmsi78ly1vacnzap8"; depends=[EMD fields spatstat]; }; hiPOD = derive2 { name="hiPOD"; version="1.0"; sha256="1i15ickz2s0kffh99qq30pl5hsl0lbj0kp55jnbv4x72hndzhmla"; depends=[rgl]; }; hiddenf = derive2 { name="hiddenf"; version="2.0"; sha256="0shc1kfiq527mkc5i97zcm51hsvknnhjg7dyfvbfqyk145v6sz00"; depends=[]; }; @@ -7317,7 +7640,7 @@ in with self; { hierfstat = derive2 { name="hierfstat"; version="0.04-22"; sha256="1fav2v2996v5kb1ffa6v5wxfm921syxg6as034vd3j4jfhdibyfx"; depends=[ade4 adegenet gtools]; }; hiertest = derive2 { name="hiertest"; version="1.1"; sha256="17maf1w4vkqknxff3f00fzv136j3dbbigyzl4vq4sln9j27w10r3"; depends=[]; }; highD2pop = derive2 { name="highD2pop"; version="1.0"; sha256="1s4v6m2d3vzvxsgmjzczv1zj3kv3ygvv6gbkkbjwsdhkvc1rdmf0"; depends=[fastclime]; }; - highSCREEN = derive2 { name="highSCREEN"; version="0.2"; sha256="0lgwxavshqd826g1zmjakhxlbngbhrc36nc8wsh9nakklx4nq9g4"; depends=[gplots]; }; + highSCREEN = derive2 { name="highSCREEN"; version="0.3"; sha256="179l82n7l7dfn40k6zgigw56ggwqyi34gllc2wvcw3yvfnd3l7s4"; depends=[gplots]; }; highTtest = derive2 { name="highTtest"; version="1.1"; sha256="18hgxlr0y8y1d4ldqmfcg4536lhyn5p6w88sq1vj74qr5wzydga1"; depends=[]; }; highcharter = derive2 { name="highcharter"; version="0.5.0"; sha256="1myypff80mxcgc3j0sflalhqz344c2zz2p90aarli1pbys9v8ynp"; depends=[assertthat broom dplyr htmltools htmlwidgets igraph jsonlite lubridate magrittr purrr quantmod rlist stringr tibble tidyr xts zoo]; }; highfrequency = derive2 { name="highfrequency"; version="0.5.3"; sha256="1d218504ghg8d3cwmsxwkznxpr2wy5li062i2lynbxzrhrk59i0l"; depends=[chron cubature MASS mvtnorm numDeriv robustbase sandwich timeDate xts zoo]; }; @@ -7325,12 +7648,13 @@ in with self; { highlightHTML = derive2 { name="highlightHTML"; version="0.2.1"; sha256="06k2idx9aadjd6xp6kadm9jh7ap1hwg7vh0bc8vw9ll82wcp1nv1"; depends=[]; }; highmean = derive2 { name="highmean"; version="3.0"; sha256="1lq7z0l1737j4wvsy7951405afylyywp7vf2i7girzh459fdfzpc"; depends=[MASS mnormt mvtnorm]; }; highr = derive2 { name="highr"; version="0.7"; sha256="1dzknqk4x7iiiq1jkh9bqm5qcvs7mbqxbkn5955050payavabfya"; depends=[]; }; - highriskzone = derive2 { name="highriskzone"; version="1.4-2"; sha256="1q9y34nj73kg5y6qy4kb023vyzbdb0f6x23asq20bj5pmz2l25y1"; depends=[deldir fields ks Matrix mvtnorm rgeos spatstat]; }; + highriskzone = derive2 { name="highriskzone"; version="1.4.5"; sha256="09ad025ydpfsrkcfqsfm4cj6lk8shrdh6vyya7isqwrd5jfyf1qc"; depends=[deldir fields ks maps Matrix mvtnorm rgeos spatstat]; }; higrad = derive2 { name="higrad"; version="0.1.0"; sha256="0q9av8qyvmvgy6a3l7svcmbkjjgnp4iny1cld4g3qsbaz3yp3jaj"; depends=[Matrix]; }; hillmakeR = derive2 { name="hillmakeR"; version="0.2"; sha256="1baynibgn4xqmpsxna8irggxvdc484mq5nza00rwg58vh1bc7wzq"; depends=[]; }; hindexcalculator = derive2 { name="hindexcalculator"; version="1.0.0"; sha256="06b4dn629avmnyqxb0l39m00wz9cg9dddmm6qhgwgnzlxh14ifgk"; depends=[]; }; hint = derive2 { name="hint"; version="0.1-1"; sha256="1n18j2hcb1qynhsln10nzryi20l5aqhr7i1aanww10y5dz573zi3"; depends=[]; }; - hisse = derive2 { name="hisse"; version="1.8.5"; sha256="1lhxj0cz3sdidpafll64fg1797y0472yxcr21dp2b83qbygkwfgl"; depends=[ape data_table deSolve GenSA nloptr phytools subplex]; }; + hipread = derive2 { name="hipread"; version="0.1.1"; sha256="1x3h52qjjv44ssifhz73xc55vv1wjrsmc021f9ida14m2dy3nwfv"; depends=[BH R6 Rcpp rlang tibble]; }; + hisse = derive2 { name="hisse"; version="1.8.8"; sha256="1r389916gmcgmg6xjm4mmqf18k0p90wdlcifwv4qjdf2c39xqjwp"; depends=[ape data_table deSolve diversitree GenSA nloptr phytools plotrix subplex]; }; histmdl = derive2 { name="histmdl"; version="0.7-1"; sha256="0k6l3pfjzlgpxv55vy8dg4sl8zhh0460xcfszwp2k9sbzanwaamp"; depends=[]; }; histogram = derive2 { name="histogram"; version="0.0-24"; sha256="1jihw92zi5a4dj6lzm1qvkynv9fp6j5iy83g8rzikp276x63nb62"; depends=[]; }; historydata = derive2 { name="historydata"; version="0.1"; sha256="1h69x3iig542d43p9zm8x83p4dq48iwsw606j4fndnqhx99vzkw6"; depends=[]; }; @@ -7349,7 +7673,7 @@ in with self; { hnp = derive2 { name="hnp"; version="1.2-6"; sha256="12cbc353ipr2rcc93skf1766g38j1pvpdkqk3cswv0cxsjl2x7pl"; depends=[MASS]; }; hoa = derive2 { name="hoa"; version="2.1.4"; sha256="15klcpmja4afwmpfxrxgrfis0vj7fil8k15jc3p0lqz3dhvq0dvf"; depends=[statmod survival]; }; hoardeR = derive2 { name="hoardeR"; version="0.9.2"; sha256="0sss3ki2w0aqyp084pprycw8d8vgm60z41iq6g9nxhqhr9xy5kdw"; depends=[bamsignals Biostrings data_table GenomicRanges GenomicTools httr IRanges MASS R_utils RCurl Rsamtools seqinr stringr XML]; }; - hoardr = derive2 { name="hoardr"; version="0.2.0"; sha256="13bjycnr1v524c5wxigdd3kn8bx1sgwdqb10hbmbyjxffabacafr"; depends=[digest R6 rappdirs]; }; + hoardr = derive2 { name="hoardr"; version="0.5.0"; sha256="15s0803cgh0gxxrz4ipicyzgy528sj6g9pc453cdcg079vd8dw12"; depends=[digest R6 rappdirs]; }; hogsvdR = derive2 { name="hogsvdR"; version="0.1"; sha256="0ji4j9fzwnacdqbzrj5zphak5nsin7vcja15w48fik8hv5w6qs46"; depends=[MASS Rcpp RcppArmadillo]; }; holdem = derive2 { name="holdem"; version="1.2"; sha256="0mcb4civ4p7apm7kfl88apvb4yznsmn4hggfggmjhs046g6bi2p7"; depends=[]; }; homals = derive2 { name="homals"; version="1.0-8"; sha256="0gad0jmflw5zmzf9hk5qqmxxpbncm9gngsi24i3rgiz7565kli1r"; depends=[ape rgl scatterplot3d]; }; @@ -7369,10 +7693,12 @@ in with self; { housingData = derive2 { name="housingData"; version="0.3.0"; sha256="0ngfx2vjx705xixzpz0rgx1481cr2szj4yfi5g7ma1hhivddl7d1"; depends=[]; }; howmany = derive2 { name="howmany"; version="0.3-1"; sha256="045ck8qahfg2swbgyf7dpl32ryq1m4sbalhr7m5qdgpm62vz8h7f"; depends=[]; }; hpcwld = derive2 { name="hpcwld"; version="0.5"; sha256="17k4mw41gygwgvh7h78m0jgzh1bivrvrsr8lgxxw3sbkw88lwb40"; depends=[multicool partitions]; }; + hpiR = derive2 { name="hpiR"; version="0.2.0"; sha256="0l9x0w6a3ssqcysw8bwmml541nags3b1wxbvipg4rqjfazpdxji4"; depends=[caret dplyr forecast ggplot2 gridExtra imputeTS knitr lubridate magrittr MASS plyr purrr rlang robustbase zoo]; }; hpoPlot = derive2 { name="hpoPlot"; version="2.4"; sha256="176bf93gjwbi2z7nz81w4aycwax6f7jxvs3236zrmf0f0f4m7bkc"; depends=[functional magrittr Rgraphviz]; }; hqmisc = derive2 { name="hqmisc"; version="0.1-1"; sha256="0jcy2hb3dmzf9j4n92aq7247mx9w7n30wpsx0dkchqnjwlqwwncw"; depends=[]; }; hqreg = derive2 { name="hqreg"; version="1.4"; sha256="1j6zp3rmpjx409vm7kq159mlawg87wsq0ypdkan34yxxv9py2jmi"; depends=[]; }; - hrbrthemes = derive2 { name="hrbrthemes"; version="0.5.0"; sha256="0bayblwwf4fwjc21c7zhdipvfxycfil4xkja0dirvvhk5zwszgnx"; depends=[extrafont ggplot2 htmltools knitr magrittr rmarkdown scales]; }; + hrIPW = derive2 { name="hrIPW"; version="0.1.2"; sha256="0bgcz4v9cj3aajcp25bv4g7magj54n86qy5nmgr6kqm8sspy260x"; depends=[survival]; }; + hrbrthemes = derive2 { name="hrbrthemes"; version="0.5.0.1"; sha256="14nqv809i5cdmbzdpvcppf2r1qsjv0f4lk5w6s4sjinaf68rzpzg"; depends=[extrafont ggplot2 htmltools knitr magrittr rmarkdown scales]; }; hsdar = derive2 { name="hsdar"; version="0.7.1"; sha256="1bjcgkqhjcrysyh0l1w3r1zzmv3sdlb7xzxdc504z1viy1ayh6ly"; depends=[caret raster rgdal signal]; }; hsicCCA = derive2 { name="hsicCCA"; version="1.0"; sha256="1d4lkjrihwhl3jrsj7250ccd90nfwpllyavc3mp15fhcy2jnjci8"; depends=[]; }; hsm = derive2 { name="hsm"; version="0.2.0"; sha256="066shjikqrrkxpnra4zknax1a0sk5nx9ms1br58vwqqvqq479rym"; depends=[]; }; @@ -7384,8 +7710,8 @@ in with self; { htmltab = derive2 { name="htmltab"; version="0.7.1"; sha256="0lymagm7z6zn0ddygqxi831ikk74112lkqkbvs5j1djhmr359ajc"; depends=[httr XML]; }; htmltidy = derive2 { name="htmltidy"; version="0.4.0"; sha256="090rj1fzdsa8m4g33d4mx92dm8afh173i4hqa4zym8c909jwh9qn"; depends=[htmltools htmlwidgets Rcpp XML xml2]; }; htmltools = derive2 { name="htmltools"; version="0.3.6"; sha256="18k8r1s8sz1jy7dkz35n69wj20xhmllr53xmwb4pdzf2z61gpbs4"; depends=[digest Rcpp]; }; - htmlwidgets = derive2 { name="htmlwidgets"; version="1.2"; sha256="04c4d0mfcy3dkdlbxnaccpdgxvyxfdwfmmh5djim6v9hyg0j2z8s"; depends=[htmltools jsonlite yaml]; }; - htree = derive2 { name="htree"; version="1.0.0"; sha256="1yw29rk752g3sc50igcgnxfsp7ydcmrlwpacch5c8yjg5di06ymb"; depends=[]; }; + htmlwidgets = derive2 { name="htmlwidgets"; version="1.3"; sha256="04jsdh14l2zifbjpbbh23w7bxz1wpsas0zb2gy2zwv4yqamzzr7i"; depends=[htmltools jsonlite yaml]; }; + htree = derive2 { name="htree"; version="2.0.0"; sha256="15bi5c2p4aghihp3k12s78447j2x9hbsaq56b5lc8jmd1vf0jdwb"; depends=[]; }; hts = derive2 { name="hts"; version="5.1.5"; sha256="0mvsxrk7wkfn81hbk8a80fckiqiwdbvhq42k7c6lm69gamnbak2f"; depends=[forecast Matrix matrixcalc Rcpp RcppEigen SparseM]; }; httk = derive2 { name="httk"; version="1.8"; sha256="1snwqqvacxgl4cyadx5la87xh4kxiqpdmyq4szqz5r1aq2sxrr03"; depends=[data_table deSolve msm mvtnorm survey truncnorm]; }; httpRequest = derive2 { name="httpRequest"; version="0.0.10"; sha256="0f6mksy38p9nklsr44ki7a79df1f28jwn2jfyb6f9kbjzh98746j"; depends=[]; }; @@ -7393,7 +7719,7 @@ in with self; { httpcode = derive2 { name="httpcode"; version="0.2.0"; sha256="06k853ihwzkcx4z3jzazpb03p91frqkwz18jy4fwr8j2nwyqbhgv"; depends=[]; }; httping = derive2 { name="httping"; version="0.2.0"; sha256="0hdcf51yak8yagy4xj9cyck934lgmvpkd08jvlql33ir5mqvvv3i"; depends=[httpcode httr jsonlite magrittr pryr]; }; httptest = derive2 { name="httptest"; version="3.1.0"; sha256="1r0grzlblyri526a3pp2n8v9zf23kf41i6kl64qmkrq1bamr0m17"; depends=[digest httr jsonlite testthat]; }; - httpuv = derive2 { name="httpuv"; version="1.4.4.2"; sha256="03lc8j98c6fx9g431is0q5zm4y4phjg99h7w6y6c38cjg7kphr72"; depends=[BH later promises Rcpp]; }; + httpuv = derive2 { name="httpuv"; version="1.4.5"; sha256="1ddpcarzf694h0gy5pdz7l5glqfv4hr9dmxb4vw7yqd0bga174gi"; depends=[BH later promises Rcpp]; }; httr = derive2 { name="httr"; version="1.3.1"; sha256="0n7jz2digbgv48rbr9vmzv4vmf4rahl9jjy31izs7sxj4rs4s4r2"; depends=[curl jsonlite mime openssl R6]; }; hues = derive2 { name="hues"; version="0.1"; sha256="0b6y4ld242fqzx4ccxzk4i4zbx7myk7v3a03r0klgbh2mmw3ixm0"; depends=[colorspace]; }; huge = derive2 { name="huge"; version="1.2.7"; sha256="134d951x42vy9dcmf155fbvik2934nh6qm2w5jlx3x2c6cf7faq4"; depends=[igraph lattice MASS Matrix]; }; @@ -7405,11 +7731,11 @@ in with self; { hunspell = derive2 { name="hunspell"; version="2.9"; sha256="10186544s6nyd2ba470idxrxsl788dkmr1g1ri8x2n1lky9zmrik"; depends=[digest Rcpp]; }; hurdlr = derive2 { name="hurdlr"; version="0.1"; sha256="1ryrqsxa07isxv2zx156bcn36d4yjvwpirb8jqcmqm97q7rmihmq"; depends=[]; }; hurricaneexposure = derive2 { name="hurricaneexposure"; version="0.0.1"; sha256="1j6srqnmdhmg1yg06nqxapdrd9p3yrfs01z0sk43dvjq4dmwmrjr"; depends=[data_table dplyr ggmap ggplot2 lazyeval lubridate maps purrr RColorBrewer stringr tidyr]; }; - hutils = derive2 { name="hutils"; version="1.1.0"; sha256="05vywa9lgnpvrkly5mbc4wlxc5v7cz58zgm6wynbxpc58m6smi73"; depends=[data_table fastmatch magrittr]; }; - huxtable = derive2 { name="huxtable"; version="4.0.1"; sha256="1z93py9nnfpvqkackgxvr2pnd642zcvqks9x01m4nh6dsbh52bs7"; depends=[assertthat dplyr glue htmltools knitr rmarkdown stringr tibble tidyselect]; }; + hutils = derive2 { name="hutils"; version="1.2.0"; sha256="0yfy5mydy0il7jlm2ddn2cmja5advshazxjrfa5kgqpc4aqx0avs"; depends=[data_table fastmatch magrittr]; }; + huxtable = derive2 { name="huxtable"; version="4.2.1"; sha256="1x6w773jaxj8d2ijdpd15lci7z8i8hhc1ch9af5vb9ysps4p07j6"; depends=[assertthat glue memoise stringr tibble tidyselect]; }; hwde = derive2 { name="hwde"; version="0.67"; sha256="0wb2f9i5qi7w77ygh8bvydfpr7j5x8dyvnnhdkajaz0wdcpkyaqy"; depends=[]; }; hwriter = derive2 { name="hwriter"; version="1.3.2"; sha256="0arjsz854rfkfqhgvpqbm9lfni97dcjs66isdsfvwfd2wz932dbb"; depends=[]; }; - hwwntest = derive2 { name="hwwntest"; version="1.3"; sha256="1b5wfbiwc542vlmn0l2aka75ss1673z8bcszfrlibg9wwqjxlwk5"; depends=[polynom wavethresh]; }; + hwwntest = derive2 { name="hwwntest"; version="1.3.1"; sha256="1mz5svx5vbisdl5wxdnwip13pq4slyigc7j52l526rr9n0l0pr5v"; depends=[polynom wavethresh]; }; hybridEnsemble = derive2 { name="hybridEnsemble"; version="1.0.0"; sha256="08y11cmlhnl456wxsvh3ll1f9ywkmgqjwlwr3v3qhm54nlanwvkr"; depends=[ada AUC e1071 FNN genalg GenSA glmnet kernelFactory NMOF nnet nnls pso quadprog randomForest reportr Rmalschains ROCR rotationForest rpart soma tabuSearch]; }; hybridHclust = derive2 { name="hybridHclust"; version="1.0-5"; sha256="0w06vna66hlmvx10dl1l0nzbnxkd634gxjz26w015f83vpmfc5vz"; depends=[cluster]; }; hybridModels = derive2 { name="hybridModels"; version="0.3.5"; sha256="0bg065j3y3xwxlib9i78pa0ghlblyp4qq1kmh3j02w8xi00rnrs6"; depends=[doParallel foreach ggplot2 GillespieSSA reshape2 stringr]; }; @@ -7419,19 +7745,19 @@ in with self; { hydroTSM = derive2 { name="hydroTSM"; version="0.5-1"; sha256="053id9ldr10mafww3vas9fiy16lz0n1mqqfg6wjsbm5r15jkz3ha"; depends=[automap e1071 gstat lattice maptools sp xts zoo]; }; hydrogeo = derive2 { name="hydrogeo"; version="0.6-1"; sha256="16m6yvr9yhvb0vdh9pqd6gzf3h9km7gd89y6risjddv6g83469k8"; depends=[]; }; hydrolinks = derive2 { name="hydrolinks"; version="0.10.0"; sha256="0004a03bx9l9wq6zdz5az41rjxv1ka4qmnxk6ksy8i7365wsay88"; depends=[dbplyr dplyr httr rappdirs RSQLite sf units]; }; - hydroscoper = derive2 { name="hydroscoper"; version="1.0.0"; sha256="09dcn2wfd06waxzq8cv8lxyw07kavjp30qc2czn2gamrak8xvrl9"; depends=[jsonlite pingr plyr readr stringi stringr tibble]; }; + hydroscoper = derive2 { name="hydroscoper"; version="1.1.1"; sha256="0fykbn3ri9ypyxcrsbwi5pmyzbfp5dvrzg4klhjp0f88yfz80nbm"; depends=[jsonlite pingr plyr readr stringi stringr tibble]; }; hydrostats = derive2 { name="hydrostats"; version="0.2.5"; sha256="1n0wy8i1cfsgmqh898qi0qnqn4qx1srjvd05vmsf9qmhpnnyqw5m"; depends=[]; }; - hyfo = derive2 { name="hyfo"; version="1.3.9"; sha256="03f3irmhndwfnv4i121gwxb2yv1868pggzyr80pgp4969qzddacm"; depends=[data_table ggplot2 lmom maps maptools MASS moments ncdf4 plyr reshape2 rgdal rgeos zoo]; }; + hyfo = derive2 { name="hyfo"; version="1.4.0"; sha256="03xd4nm8zmc8gw8rml8svfim64xcslvpmdcldlri9cf89s8v35br"; depends=[data_table ggplot2 lmom maps maptools MASS moments ncdf4 plyr reshape2 rgdal rgeos zoo]; }; hyper_fit = derive2 { name="hyper.fit"; version="1.0.3"; sha256="17f5i2i960796hl92y7ci9ffspway435r02kw1zk91lvfn927hng"; depends=[LaplacesDemon magicaxis MASS rgl]; }; - hyper2 = derive2 { name="hyper2"; version="1.0-1"; sha256="107cp6na0srqax42fmvcsrviy631hg6phqmkc0cxz1zdxxxw6442"; depends=[partitions Rcpp]; }; + hyper2 = derive2 { name="hyper2"; version="1.0-4"; sha256="00999k891s5l2wcnn6ych1v60ckqd2qxyckrfxh4kxnq9891hqcx"; depends=[magrittr partitions Rcpp]; }; hyperSMURF = derive2 { name="hyperSMURF"; version="2.0"; sha256="1aczsph6ax5xfd5rfvsd9bmgaq3j2f5f82fx8whrgbin0hxz19d8"; depends=[randomForest unbalanced]; }; hyperSpec = derive2 { name="hyperSpec"; version="0.99-20180627"; sha256="12bgp3nm9mwi5w3v8a9fnm4a2cxid3la0r3sxs10azikn5yw0ib5"; depends=[ggplot2 lattice latticeExtra lazyeval testthat XML]; }; hypercube = derive2 { name="hypercube"; version="0.1.0"; sha256="0iv3cfs636mwijm2rjk427izf0gk5lh2fknd7bmb8pd188ckwqmf"; depends=[stringr]; }; - hypergate = derive2 { name="hypergate"; version="0.7"; sha256="02i8aywpdp0daxqrqnxfp2xk60jby268c064lcbggjb9nbm04q0m"; depends=[lattice]; }; + hypergate = derive2 { name="hypergate"; version="0.8"; sha256="0kfw5k8p3scyxc41ylc14bpny14ynbn9l0fjg6bgmgxqsss54d7h"; depends=[]; }; hypergea = derive2 { name="hypergea"; version="1.3.6"; sha256="1k1525bkkj83j2nn9ixidb8vjvdmc4l9jvfarzgg532gg7wn3841"; depends=[]; }; hypergeo = derive2 { name="hypergeo"; version="1.2-13"; sha256="13jdiy216znwhr91iqnh03mvkmyscw439syb3h4i67dd78sphnvd"; depends=[contfrac deSolve elliptic]; }; hypersampleplan = derive2 { name="hypersampleplan"; version="0.1.1"; sha256="1sk3s1jm46ac4i7p433s3kyngj86kq2821zzhp30a3y8vi1j2psq"; depends=[]; }; - hypervolume = derive2 { name="hypervolume"; version="2.0.10"; sha256="16q2h42c2q4b6hq5h6lkxgwizdln1nbq1l7n5f226zjlfrvgk8fx"; depends=[data_table e1071 fastcluster geometry hitandrun ks maps MASS mvtnorm pdist progress raster Rcpp RcppArmadillo rgeos rgl sp]; }; + hypervolume = derive2 { name="hypervolume"; version="2.0.11"; sha256="1lfxsqvkzych9zvknxf4fnsfav9kv8cjss0pr4ny1wbmbvdxbbqc"; depends=[data_table e1071 fastcluster geometry hitandrun ks maps MASS mvtnorm pdist progress raster Rcpp RcppArmadillo rgeos rgl sp]; }; hyphenatr = derive2 { name="hyphenatr"; version="0.3.0"; sha256="0mv77njy0ha7bj3kw620fk9r8cdzqd0v3ipikihqxq47fr57ml0v"; depends=[Rcpp stringi]; }; hypothesestest = derive2 { name="hypothesestest"; version="1.0"; sha256="0g8sm386m1zm9i3900r62x83wb600cy8hqk7dlvbx6wcgrxg82sm"; depends=[]; }; hypothesisr = derive2 { name="hypothesisr"; version="0.1.1"; sha256="0z06risagphhvqiw4lrxy52q6q2yr10w2yxsm8iz1wh9ik097pcv"; depends=[dplyr httr jsonlite]; }; @@ -7439,8 +7765,8 @@ in with self; { hzar = derive2 { name="hzar"; version="0.2-5"; sha256="000l4ki3hvznnhkxc5j422h5ifnsfqalv666j48yby1hsf1lc3kg"; depends=[coda foreach MCMCpack]; }; iBATCGH = derive2 { name="iBATCGH"; version="1.3"; sha256="0pnkkabzi57czcwd9i15nwv8ggwvyxmvn1wam7yrrrbvmi17lmrm"; depends=[msm Rcpp RcppArmadillo]; }; iBST = derive2 { name="iBST"; version="1.0"; sha256="02p7lcr1wrf21v4568jc8hmjcijy3fnbv77s8nlhv2s4p0pgzh5x"; depends=[Rcpp rpart survival]; }; - iC10 = derive2 { name="iC10"; version="1.1.3"; sha256="19dlrwj47zmdgmvzjfs5qa9fqq8g9ywhgy5mqbp99n7d9hg4ybxh"; depends=[iC10TrainingData pamr]; }; - iC10TrainingData = derive2 { name="iC10TrainingData"; version="1.0.1"; sha256="1x1kgxiib9l7whm2kmbv1s912hgpl7rdpqpn67nlkiswnr27hqn4"; depends=[]; }; + iC10 = derive2 { name="iC10"; version="1.4.2"; sha256="0p7xqshybfqm3basvph7x718yppk4kbg8agpvpq0kmkq5db5n1w6"; depends=[iC10TrainingData pamr]; }; + iC10TrainingData = derive2 { name="iC10TrainingData"; version="1.3.1"; sha256="175ymib3h359296hk36psryksisipx63ybvacz8hys21irzx58j1"; depends=[]; }; iClick = derive2 { name="iClick"; version="1.4"; sha256="1j1mk4w1m90f90ijxdiw67sycxms4mqljcmsic81m2pq228l8zd5"; depends=[boot car coefplot fBasics forecast lattice lmtest lubridate openair papeR rugarch sandwich timeDate timeSeries xts zoo]; }; iCluster = derive2 { name="iCluster"; version="2.1.0"; sha256="09j36xv87d382m5ijkhmp2mxaajc4k97cf9k1hb11ksk7fxdqz6r"; depends=[caTools gdata gplots gtools lattice]; }; iDINGO = derive2 { name="iDINGO"; version="1.0.2"; sha256="041yvp3nzk3ipjlx17xcn9yiwr1hlns0pd3vzqrck5v9glnp4sbr"; depends=[GGMridge glasso igraph mvtnorm scales visNetwork]; }; @@ -7451,8 +7777,8 @@ in with self; { iGSEA = derive2 { name="iGSEA"; version="1.2"; sha256="1xlz8mbxqnrwyqj7jwma7vmvjlaccajbfxf3hi4wp5qs2pch8806"; depends=[]; }; iGasso = derive2 { name="iGasso"; version="1.4"; sha256="17xxqncl5xcphdqclghcazygcgibf8ijdf4kkl3ga11xf70sahj2"; depends=[CompQuadForm lattice]; }; iMRMC = derive2 { name="iMRMC"; version="1.1.0"; sha256="04wpqdds5vfqvl8n5g64vnyh4a40dxjh8l1bgw1vdz1372n0421g"; depends=[]; }; - iMediate = derive2 { name="iMediate"; version="0.4"; sha256="0pwvzd0k9m2jd7sizl436vs63rg9yinisrb0flz34yj5avn6rmb0"; depends=[mediation mvtnorm plotly]; }; - iNEXT = derive2 { name="iNEXT"; version="2.0.12"; sha256="1041r5k0k3kzik5vwyd62s4yc85lnnxbg5gbbl0kl629kikymb6y"; depends=[ggplot2 reshape2]; }; + iMediate = derive2 { name="iMediate"; version="0.5"; sha256="0gr0nibfdmiyxz8n7pfcl1d2gxhl5g2pi9yhnmsvqzry4j3x27yw"; depends=[mvtnorm plotly]; }; + iNEXT = derive2 { name="iNEXT"; version="2.0.17"; sha256="1gg9zzcfjn70scz9kmn37rvz3lnbkbd4a59xmfy56x9xgs3wrxwp"; depends=[ggplot2 reshape2]; }; iNOTE = derive2 { name="iNOTE"; version="1.0"; sha256="1969xmgfv9405r09zpd2icvjd9vvzw4dx5qaqxk1a0jvbvhp3h88"; depends=[CompQuadForm mixtools plyr]; }; iNextPD = derive2 { name="iNextPD"; version="0.3.2"; sha256="06wka2qr1jm3hvi8j0b19fr21v72gmqknz8dg0l5wl91m0prqns3"; depends=[ade4 ggplot2 iNEXT Rcpp]; }; iRF = derive2 { name="iRF"; version="2.0.0"; sha256="1ll4lxg743p2zipxcq13yjsc7j7dk766dcyixwxilllbisg0dh8y"; depends=[AUC data_table doParallel dplyr foreach Matrix RColorBrewer Rcpp]; }; @@ -7465,7 +7791,7 @@ in with self; { iWISA = derive2 { name="iWISA"; version="1.0-2"; sha256="0jqi1kh7jlc04nb9d1w711q4i8j1vgwbxjls09z7853kv22wxfyz"; depends=[fda ggplot2 waveslim]; }; iWeigReg = derive2 { name="iWeigReg"; version="1.0"; sha256="09ajbqllr4ajmpk8qs6qw019fx8a7vsabm37867zycssn77z9nc8"; depends=[MASS trust]; }; iadf = derive2 { name="iadf"; version="0.1.0"; sha256="02zx9n4ncg10bbydrr05631vzc4w2b1jg3x6xiaffg7x5rh4mnyf"; depends=[dplR dplyr manipulate rlang tibble tidyr]; }; - ibd = derive2 { name="ibd"; version="1.3"; sha256="0a94vn5awn425qw99y8y38xivgzq16s3yvpkgld54p7jwhvmgxln"; depends=[car emmeans lpSolve MASS multcompView]; }; + ibd = derive2 { name="ibd"; version="1.4"; sha256="1755zbsy7ym5xpnma1r2hdii11p42765k8xxf3dfv6mbhxiyzpbq"; depends=[car emmeans lpSolve MASS multcompView]; }; ibdreg = derive2 { name="ibdreg"; version="0.2.5"; sha256="1kaa5q1byi30wzr0mw4w2cv1ssxprzcwf91wrpqwkgcsdy7dkh2g"; depends=[]; }; ibeemd = derive2 { name="ibeemd"; version="1.0.1"; sha256="115z13q02gzixziknix2l53mi12zzg30ra9h35pv6qzrr11ra1ic"; depends=[deldir fields rgeos sp spdep]; }; ibelief = derive2 { name="ibelief"; version="1.2"; sha256="1zh6bpg0gaybslr1p05qd5p2y5kxbgyhgha4j4v5d69d78jwgah9"; depends=[]; }; @@ -7481,32 +7807,32 @@ in with self; { icapca = derive2 { name="icapca"; version="1.1"; sha256="131gdrk8vsbac0krmsryvsp21bn9hzxqxq847zn16cxjf6y5i3xb"; depends=[]; }; icarus = derive2 { name="icarus"; version="0.3.0"; sha256="1656bz0av59dpgndibn0bc5zr9zka9pmw7qmhjz2b956bh7sh4ag"; depends=[]; }; iccbeta = derive2 { name="iccbeta"; version="1.1.0"; sha256="1xw0mz3ipkfz1jsjzwjnrm0af1gs31js7nvgy79cxqz31955zjww"; depends=[Rcpp RcppArmadillo]; }; - icd = derive2 { name="icd"; version="3.2.0"; sha256="0wd5d9zlhy9wh3phy4mz8zg0jv08hjizvlscaj208a64lwkzvq7g"; depends=[checkmate icd_data magrittr Rcpp RcppEigen testthat]; }; + icd = derive2 { name="icd"; version="3.2.1"; sha256="0knhiy18jckdyxvhp80hif1wnfg6r8fvl7h6ixb0q3lgqdc79749"; depends=[checkmate icd_data magrittr Rcpp RcppEigen testthat]; }; icd_data = derive2 { name="icd.data"; version="1.0"; sha256="0cynr9327wfg88661w4hali48mb6ghyvlqgybsa38k9bbf57v8aa"; depends=[]; }; icdGLM = derive2 { name="icdGLM"; version="1.0.0"; sha256="1mh9kwn21n19v4lrmj33ghpna7dl66fx19gi6lcjanmrpzrkwdnz"; depends=[Matrix]; }; - icenReg = derive2 { name="icenReg"; version="2.0.7"; sha256="1fc6l3mqnm4rcg49bk2plfa011g7nay71gzd4nxnjisifmw6qi2s"; depends=[coda foreach MLEcens Rcpp RcppEigen survival]; }; + icenReg = derive2 { name="icenReg"; version="2.0.9"; sha256="0jfizdahdnvq6a476j25acvahrh68anihimk26nl98sad1gf9zzk"; depends=[coda foreach MLEcens Rcpp RcppEigen survival]; }; icensBKL = derive2 { name="icensBKL"; version="1.1"; sha256="12zx5x81jy48mp0l6a5ga0ikkjxvndv5cv2xf6d2lczfk7fz9lbp"; depends=[gtools Icens MASS mvtnorm smoothSurv survival TeachingDemos]; }; icensmis = derive2 { name="icensmis"; version="1.3.1"; sha256="1c0j43wffb5h99chlj8j45lpan7dpn2i0r4rr6b2kq16p1zabfjw"; depends=[Rcpp]; }; icesAdvice = derive2 { name="icesAdvice"; version="1.4-2"; sha256="10f1ss949gi7s5fhfbygqaf05pshalw6sa266v4gnxqwqynf4qbj"; depends=[]; }; icesDatras = derive2 { name="icesDatras"; version="1.2-0"; sha256="0arkn9ma03qb21sv5chmz5fj65da5ivqhvrg8bqibbky8zkix1vh"; depends=[]; }; icesSAG = derive2 { name="icesSAG"; version="1.3-4"; sha256="1s330691an1m5h1i342ls6igqcqrlrwyhapa82x5h2krdia0nmnp"; depends=[httr icesVocab openssl png xml2]; }; - icesTAF = derive2 { name="icesTAF"; version="1.6-1"; sha256="0fsc79id8mcdp53xsrhzy43mvhginr3sixqhsxwvcz497kwdyj4a"; depends=[]; }; + icesTAF = derive2 { name="icesTAF"; version="1.6-2"; sha256="1r8dsc3dm6ziscgl7xr84b07myflwkdnpqjf0wjd3d0h5x8xdkdh"; depends=[]; }; icesVocab = derive2 { name="icesVocab"; version="1.1-2"; sha256="15ha2visv44pphkahg766afafh6467lwznvppwkvqjrbfiijkc6l"; depends=[XML]; }; icmm = derive2 { name="icmm"; version="1.1"; sha256="1w9f1rniz67rrvq0akc64s5433ddmr2cgbcljil4c58yyz8hinx8"; depends=[EbayesThresh]; }; icosa = derive2 { name="icosa"; version="0.9.81"; sha256="05gpiksncdi536f4py7szfi6myny1gqj8i0hsgpma7cfcm3npn0l"; depends=[igraph raster Rcpp rgdal rgl sp]; }; icpsrdata = derive2 { name="icpsrdata"; version="0.3.0"; sha256="17sprbbi8fmvcp8d7hwrxl5amg0j036wq483cw62zbmni3p3fl82"; depends=[httr purrr rvest]; }; - icr = derive2 { name="icr"; version="0.5.4"; sha256="0vm2k2pjsnikb80crzhxs1wpxpjjigyny5ldini6sxg3lwhc14l3"; depends=[ggplot2 Rcpp tidyr]; }; + icr = derive2 { name="icr"; version="0.5.8"; sha256="1grakn7c7slm2msdm8r059ky0s77apl80xhy65isxwj7ica64i9k"; depends=[ggplot2 Rcpp]; }; icsw = derive2 { name="icsw"; version="1.0.0"; sha256="0g7bcqs0rpbs1p202i9wjbl8hhy3r196zambm044xyf7kvsbzzf6"; depends=[]; }; idar = derive2 { name="idar"; version="1.0"; sha256="1yfv3na4rcldkpzybf7la227z4ynsl1scrziirl5gp072k7zrs01"; depends=[ape FD picante spatstat]; }; idbg = derive2 { name="idbg"; version="1.0"; sha256="1rxmj04hswxybrg7dfib3mjy8v8mdiv13zwbscp2q55z55hhf1m5"; depends=[]; }; idbr = derive2 { name="idbr"; version="0.3"; sha256="02syk7fmif0xnddl8189vnl329r8mwl3iwv2rsf6cw7mwg30fhyw"; depends=[countrycode dplyr httr jsonlite]; }; idealstan = derive2 { name="idealstan"; version="0.2.7"; sha256="1818vwlv5cr6qyg7p6kgyb996n89d2xr4cy6ys9pdhrp7lip9prr"; depends=[bayesplot BH dplyr ggplot2 lazyeval Rcpp RcppEigen rlang rstan rstantools shinystan StanHeaders stringr tidyr]; }; - idefix = derive2 { name="idefix"; version="0.2.4"; sha256="0j64pmccg01lscvjg9z97ypv3svl4jbvs4819jn4kc9ni6gq4fai"; depends=[dplyr gtools MASS maxLik Rdpack scales shiny]; }; + idefix = derive2 { name="idefix"; version="0.3.1"; sha256="18anykh7y8437ivjyc43x2fwkqni082w2aahmq3ml6i9f21w48ci"; depends=[dplyr gtools MASS maxLik mlogit Rcpp RcppArmadillo Rdpack scales shiny tmvtnorm]; }; idem = derive2 { name="idem"; version="3.5"; sha256="1fr456drfnla917byw0c8ppqrhq4i7gsd4idfasx6xx5fqhv7ypc"; depends=[BH Rcpp RcppEigen rstan sqldf StanHeaders survival]; }; idendr0 = derive2 { name="idendr0"; version="1.5.3"; sha256="11c12d166bp2i498d8y6ipg5jhz1xsdsrmnhjqnrqqzp9avvrsjp"; depends=[tkrplot]; }; identity = derive2 { name="identity"; version="0.2-1"; sha256="1j5wb5cj5j49in2g6r1shdm4ri4cfzj22hpqazvcmq4dm291sdi9"; depends=[]; }; ider = derive2 { name="ider"; version="0.1.0"; sha256="021s4fybki7a6mdsr6gkjrzfhaqdcg0m2a6r24y91jklxlxqxmws"; depends=[FNN]; }; - idm = derive2 { name="idm"; version="1.8.1"; sha256="14cy1gv12wjpsv5jih7pgq5d36gfpdc56ih4mc6hx638qkkyk87z"; depends=[animation ca corpcor dummies ggplot2 ggrepel]; }; + idm = derive2 { name="idm"; version="1.8.2"; sha256="04f0i0kwdxywmj2i184knx5a5v9svx0lbam6wpz49hghg7qpy0w5"; depends=[animation ca corpcor dummies ggplot2 ggrepel]; }; idmTPreg = derive2 { name="idmTPreg"; version="1.1"; sha256="1329sjb4dnw3yiyg16whbj4l2v0kg8phg1x4ysvyp2kqkmw14yq6"; depends=[doParallel foreach survival]; }; idr = derive2 { name="idr"; version="1.2"; sha256="05nvgw1xdg670bsjjrxkgd1mrdkciccpw4krn0zcgdf2r21dzgwb"; depends=[]; }; ids = derive2 { name="ids"; version="1.0.1"; sha256="1s6ga94gds5ydr9f8qbjfgfpg2dvbnkcrlybqlb33hk3c0c2l8dn"; depends=[openssl uuid]; }; @@ -7522,42 +7848,44 @@ in with self; { ifs = derive2 { name="ifs"; version="0.1.5"; sha256="03g9cgs0zp89b1d7rpcn5clkvmg0spnariwrifd8hha476ldvfcy"; depends=[]; }; ifultools = derive2 { name="ifultools"; version="2.0-4"; sha256="0pv2msaa1rmj8csxdclzi2jwg9pfdvh87blj9j3xa3myisglq092"; depends=[MASS splus2R]; }; ig_vancouver_2014_topcolour = derive2 { name="ig.vancouver.2014.topcolour"; version="0.1.2.0"; sha256="0yclvm6xppf4w1qf25nf82hg1pliah68z7h3f683svv0j62q748h"; depends=[]; }; - igraph = derive2 { name="igraph"; version="1.2.1"; sha256="1hcr6b1lz030lgay1bz8y8sxaf2j93ds8n8gsqr6qhssz141hd2m"; depends=[magrittr Matrix pkgconfig]; }; + igraph = derive2 { name="igraph"; version="1.2.2"; sha256="1bggm7b8v3bh7q2589w26qvd7sgs69m4qiij7d0rbm0ykkgxm8lx"; depends=[magrittr Matrix pkgconfig]; }; igraphdata = derive2 { name="igraphdata"; version="1.0.1"; sha256="19w5npa4b8c054v94xlr7nmhhg2fhq4m8jbds86skp8zvipl4rkl"; depends=[]; }; igraphinshiny = derive2 { name="igraphinshiny"; version="0.1"; sha256="1ww5s4jfihzcx4k35lbhzsf54z720xh7b2p5alzk843m6rx77986"; depends=[igraph shiny]; }; igraphtosonia = derive2 { name="igraphtosonia"; version="1.0"; sha256="0vy9jnpjp68l8s0hi1l57j9p41c543h3iqv16pwl550f38zqp8j6"; depends=[igraph]; }; iheatmapr = derive2 { name="iheatmapr"; version="0.4.3"; sha256="0124d7h8n83zb5kvvavccprlqknpqrd634zv7sz9s915xzhp7jgz"; depends=[fastcluster ggdendro htmlwidgets jsonlite knitr magrittr plyr RColorBrewer S4Vectors scales]; }; ihs = derive2 { name="ihs"; version="1.0"; sha256="1c5c9l6kdalympb19nlgz1r9zq17575ivp3zrayb9p6w3fn2i06h"; depends=[maxLik]; }; iilasso = derive2 { name="iilasso"; version="0.0.2"; sha256="043m1n5840459zsknkb54801apb0a2cqfprncmj2wp235rbqj832"; depends=[BH Matrix Rcpp]; }; - ijtiff = derive2 { name="ijtiff"; version="1.1.0"; sha256="0hb201qcwynbdi2fzspvv9sdhyx0cypbsvhawhcwj5zqdp6f507f"; depends=[checkmate fields filesstrings magrittr purrr Rcpp readr rlang stringr]; }; + ijtiff = derive2 { name="ijtiff"; version="1.4.2"; sha256="1wqh8cwcpzfnkcm2ljabbkfaddmd9dxvaqsc3vp1ivnmq426fh99"; depends=[BBmisc checkmate dplyr fields filesstrings glue magrittr purrr Rcpp readr rlang stringr]; }; iki_dataclim = derive2 { name="iki.dataclim"; version="1.0"; sha256="1yhvgr8d3j2r8y9c02rzcg80bz4cx58kzybm4rch78m0207wqs7p"; depends=[climdex_pcic lubridate PCICt zoo]; }; ilc = derive2 { name="ilc"; version="1.0"; sha256="0hs0nxv7cd300mfxscgvcjag9f2igispcskfknb7sn7p8qvwr5ki"; depends=[date demography forecast rainbow survival]; }; imageData = derive2 { name="imageData"; version="0.1-50"; sha256="0i56sksyxa50bhp3pimgag2bg37y1gfadky6i0xgg484wf1xw148"; depends=[dae GGally ggplot2 Hmisc RColorBrewer reshape XLConnect]; }; imager = derive2 { name="imager"; version="0.41.1"; sha256="0ja8pi8l44llq75af4y8blb6vby43ikmy87sx83i1i327zfjzd5g"; depends=[Cairo downloader igraph jpeg magrittr plyr png purrr Rcpp readbitmap stringr]; }; - imagerExtra = derive2 { name="imagerExtra"; version="1.1.1"; sha256="02ws4l52a3jrgqmn76p6p54mnb0ypvkd39yj8pqn8qg8l44fp3nw"; depends=[dtt imager magrittr Rcpp]; }; + imagerExtra = derive2 { name="imagerExtra"; version="1.2.0"; sha256="1r94zcnfvd92qqls76ma3vgc8bnhah5jlminnbp9knr0jar8r0xp"; depends=[fftwtools imager magrittr Rcpp tesseract]; }; imaginator = derive2 { name="imaginator"; version="0.1.1"; sha256="1xp5wsv570f1qy2fn99d8ijydmlapb6h6kinj07pilvv215dg93w"; depends=[assertthat dplyr lubridate magrittr stringi]; }; imagine = derive2 { name="imagine"; version="1.4.0"; sha256="1v0rds64i0f3xgg7ca14ncw4nrcc80gvjf1fbp498idq38z79qzc"; depends=[Rcpp]; }; imbalance = derive2 { name="imbalance"; version="1.0.0"; sha256="1pfhwf4844m0a8qsm852am63x18vlkbs6m1s9izrpd219616skpr"; depends=[bnlearn C50 FNN ggplot2 KernelKnn mvtnorm Rcpp RcppArmadillo smotefamily]; }; imdbapi = derive2 { name="imdbapi"; version="0.1.0"; sha256="11v7c0s7qqf02b186md5lhgkgmywkn8lmmanlz3gfcxca26g047y"; depends=[dplyr httr stringr]; }; imfr = derive2 { name="imfr"; version="0.1.5"; sha256="1f4zynra79h42dmd9qhg67wwvs7c640f5is98bq30fdphiybihgz"; depends=[dplyr httr jsonlite]; }; imguR = derive2 { name="imguR"; version="1.0.3"; sha256="14f7ghgc8rbrpqb21rinfbrj1wh80i6ii0awwi814152v5qzj4b3"; depends=[httr jpeg png]; }; - iml = derive2 { name="iml"; version="0.5.1"; sha256="043n14samxl85by7vihrc7nv45kaj287m0ab04fssvfn8rnprqlh"; depends=[checkmate data_table ggplot2 glmnet Metrics partykit R6]; }; + iml = derive2 { name="iml"; version="0.7.1"; sha256="1wiylfd83p4wzccp0r3ydxy14zvw81q368h61gimrcm7110fdpx9"; depends=[checkmate data_table foreach ggplot2 glmnet Metrics partykit R6 yaImpute]; }; immer = derive2 { name="immer"; version="1.0-138"; sha256="0jpjrvr3mpgqfyl56i95grb3jmrzzs00ciafsw9rd7fpbxnskkjf"; depends=[CDM coda MASS psychotools Rcpp RcppArmadillo sirt TAM]; }; - imp4p = derive2 { name="imp4p"; version="0.6"; sha256="1aaj62ia87khkdkw6lx59dcx3lq1clfdzw7gbi0ffy99lp608q6s"; depends=[imputeLCMD Iso Rcpp truncnorm]; }; + imp4p = derive2 { name="imp4p"; version="0.7"; sha256="1hpxx1jpwd4v19xnpjjbwcvfzvb63jfd0jq3vcq000w7am9pwwba"; depends=[Iso norm Rcpp truncnorm]; }; + impimp = derive2 { name="impimp"; version="0.2.0"; sha256="0qaf7spcgjvg8s8nm4b535gx63vp6fy7r084xfxd94ygr8vb3lww"; depends=[]; }; implyr = derive2 { name="implyr"; version="0.2.4"; sha256="1xc5c8wpq1bdvfm4rkqmvykgkil9fm9n1q9ndjv701jbdr4rnisd"; depends=[assertthat DBI dbplyr dplyr rlang tidyselect]; }; r_import = derive2 { name="r_import"; version="1.1.0"; sha256="0blf9539rbfwcmw8zsb4k58slb4pdnc075v34vmyjw752fznhcji"; depends=[]; }; importar = derive2 { name="importar"; version="0.1.1"; sha256="0xv445fmjhsbdlsq03k2rlycnggn3rcyq5a49zrg4jvjamzr0rgr"; depends=[]; }; imprProbEst = derive2 { name="imprProbEst"; version="1.0.1"; sha256="09y8yd9sw0b79ca45ryi7p82vy5s8cx0gg603rlc39lgwcdv45i3"; depends=[inline lpSolve]; }; + imptree = derive2 { name="imptree"; version="0.5.1"; sha256="0f087000092ydnpj3ch4mbip8wp32scn8xw4vlkq5lf6130gfs1b"; depends=[Rcpp]; }; imputeLCMD = derive2 { name="imputeLCMD"; version="2.0"; sha256="10v3iv1iw6mnss6ry836crq9zdgid2y1h3pvigzjsrmnp5n89mfz"; depends=[impute norm pcaMethods tmvtnorm]; }; imputeMDR = derive2 { name="imputeMDR"; version="1.1.2"; sha256="0ds5a4wav9vb9z5nji8hv5l76310rd970xf702fd0ckx1sh6rgd7"; depends=[]; }; imputeMissings = derive2 { name="imputeMissings"; version="0.0.3"; sha256="1dfhi235j1qz2mv89j92b903j5mdwlzisiyvvi9mmiacdj5ln89z"; depends=[randomForest]; }; imputeMulti = derive2 { name="imputeMulti"; version="0.6.4"; sha256="0ngjbj8pl5mwprrgy234a5p9dhf615z7ymfv8184hby1z6ib3mgl"; depends=[DBI gtools Rcpp RSQLite]; }; imputePSF = derive2 { name="imputePSF"; version="0.1.0"; sha256="0xfd2mybg0cbi3n35j28s4xq4iwr5rq4mqwgdqml7l2rlzidcwc8"; depends=[PSF]; }; - imputeR = derive2 { name="imputeR"; version="2.0"; sha256="0xyvy785jb1mv06jq25cnsbgiywi3857sdiizcjck7bx970lk02n"; depends=[caret Cubist gbm glmnet mboost pls rda reshape2 ridge rpart]; }; + imputeR = derive2 { name="imputeR"; version="2.1"; sha256="1xsawars52jhxfpl4hx8ghhndrvqk9vrrgajrrz2xrzi88kf6in2"; depends=[reshape2]; }; imputeTS = derive2 { name="imputeTS"; version="2.7"; sha256="12y6qzy00kb7jap4h92f3zpgdazlw3y4zydhv7gzfsmx1ka7nsfm"; depends=[forecast magrittr Rcpp stinepack]; }; imputeTestbench = derive2 { name="imputeTestbench"; version="3.0.1"; sha256="0yxvwk1bcsid116a4zqsagf2dl3vhzva559bfjjcqdgyniapcmcj"; depends=[dplyr forecast ggplot2 imputeTS reshape2 tidyr zoo]; }; imputeYn = derive2 { name="imputeYn"; version="1.3"; sha256="1b21w1aa5f7yiq8k0wa86wvbg4ij7f6ldwn6asfqwb0b90rvsgvs"; depends=[boot emplik mvtnorm quadprog survival]; }; - imsig = derive2 { name="imsig"; version="0.1.0"; sha256="0qjr2xbha6ikcfmkl0crhf9akrbygwsk87xhb45q8633fk3ssw51"; depends=[ggplot2 gridExtra HiClimR igraph RColorBrewer survival]; }; + imsig = derive2 { name="imsig"; version="1.0.0"; sha256="01ww48x9a189dvr81bangfhchr70l0sg26jdpcxf41nh2fmslfxx"; depends=[ggplot2 gridExtra HiClimR igraph RColorBrewer survival]; }; in2extRemes = derive2 { name="in2extRemes"; version="1.0-3"; sha256="1lgsqm29zmjyf8kynyra2p3q7bs4fyd7ac4v6s3pbahzhhzdk94y"; depends=[extRemes]; }; inTrees = derive2 { name="inTrees"; version="1.2"; sha256="1mwn2ijkyw0y9xcgrr56wxd2326ikarlsi79l59dplvlx2iwbi6c"; depends=[arules data_table gbm RRF xgboost xtable]; }; inaparc = derive2 { name="inaparc"; version="0.2.0"; sha256="0rgbnvvqzbx4j40qz32l1bxmg3wwzbl6719wb9m3xpakblvhhxs2"; depends=[kpeaks lhs]; }; @@ -7565,16 +7893,16 @@ in with self; { inbreedR = derive2 { name="inbreedR"; version="0.3.2"; sha256="09fr13ckyn2skiigkn4qdx5g080gcmyyrvzhcp0wrml9wpmy0h4z"; depends=[data_table]; }; incR = derive2 { name="incR"; version="1.1.0"; sha256="0q41bs7pf6hqyfwvcwc2sxq44jq95qq3qsddz53f8gphwjsyf1v7"; depends=[dplyr ggplot2 lubridate maptools rgeos]; }; inca = derive2 { name="inca"; version="0.0.3"; sha256="1g9js84xa5b6jl8gp4k0c55kjazfaw5g9biwk4v6vz3vwkwayyzh"; depends=[Matrix Rcpp RcppArmadillo]; }; - incadata = derive2 { name="incadata"; version="0.6.1"; sha256="05i0zifdzc1w6p6annhzp9rdd4v82gx2sxi4lqpdnraaczdrhgbb"; depends=[backports decoder dplyr rccmisc rvest sweidnumbr xml2]; }; + incadata = derive2 { name="incadata"; version="0.6.4"; sha256="1aj07zhf82wwg80jp461xapw8x9caa7daa59n4mxl8nqryrs77q0"; depends=[backports decoder dplyr rccmisc rvest sweidnumbr xml2]; }; incgraph = derive2 { name="incgraph"; version="1.0.1"; sha256="0zjvxk2krdlm5bcr0m80nxy46f69a1xadfjw5sjw249b28wdclml"; depends=[BH dplyr orca purrr Rcpp testthat tibble]; }; - incidence = derive2 { name="incidence"; version="1.3.1"; sha256="0qylfim4gc9i9dyhyjpfar95rznbf1lh06hvvjmxxyrc1a7lzaxw"; depends=[ggplot2 ISOweek]; }; - inctools = derive2 { name="inctools"; version="1.0.11"; sha256="08a1aqsx1f1mkykpgbqbgvai60zxj9zwpmxynyajbm4lwr3rc6rp"; depends=[cubature doParallel dplyr foreach ggplot2 glm2 magrittr plyr pracma tmvtnorm]; }; + incidence = derive2 { name="incidence"; version="1.4.1"; sha256="13c518hlhpmdl4vw4xbb593arw2pvzsj18dpvdzg7n2f8lslbyr8"; depends=[ggplot2 ISOweek]; }; + inctools = derive2 { name="inctools"; version="1.0.14"; sha256="0ial852b96x310wzvla9lahxz3mwbqqv0l0lafs0bnmyaiiwycxv"; depends=[cubature doParallel dplyr foreach ggplot2 glm2 magrittr plyr pracma rlang tibble tmvtnorm]; }; indelmiss = derive2 { name="indelmiss"; version="1.0.8"; sha256="0674hvgdq0fxab3h55iililphrr6lqp25359crvkqqgb8higbs0h"; depends=[ape numDeriv phangorn Rcpp]; }; indicspecies = derive2 { name="indicspecies"; version="1.7.6"; sha256="0a7s37k3bg4cnzkvn833nrwi6hnfa5f6jxa8ra954v4sp55g6i5d"; depends=[permute]; }; indirect = derive2 { name="indirect"; version="0.2.0"; sha256="1k7xwsx655nzl43s1mkaysyn5gydq973gynmqip67lssnm7cnch4"; depends=[gplots MASS]; }; inegiR = derive2 { name="inegiR"; version="2.0.0"; sha256="00bhb3zvqhir2rqza3axk98lxhq98s41apwpsm242pqb7wsnmg95"; depends=[jsonlite plyr XML zoo]; }; ineq = derive2 { name="ineq"; version="0.2-13"; sha256="09fsxyrh0j7mwmb5hkhmrzgcy7kf85jxkh7zlwpgqgcsyl1n91z0"; depends=[]; }; - infer = derive2 { name="infer"; version="0.2.0"; sha256="1wkfbrwq616nj1k0rmwvbnqy8ngrmxc49d6j69s5vpws2g3ga00j"; depends=[assertive dplyr ggplot2 magrittr rlang tibble]; }; + infer = derive2 { name="infer"; version="0.3.1"; sha256="0yzminwsndx1aizb91palzvlmg9pp7hnx0zfpifbj1vv00jz6d1c"; depends=[dplyr ggplot2 glue magrittr rlang tibble]; }; inference = derive2 { name="inference"; version="0.1.0"; sha256="0j92isfkbhk13yx2hd3a5dd7ikcbgjc04zisd1n5kmg6ajw2aj6r"; depends=[sandwich]; }; inferference = derive2 { name="inferference"; version="1.0.0"; sha256="1x6i8ycba9z57m1n143p1j9pmlfrhjhi4iw0fsny8xmcvqrlr85p"; depends=[Formula lme4 numDeriv]; }; inferr = derive2 { name="inferr"; version="0.3.0"; sha256="1z5bfq0gv1h6iw8nwc19ar6f2sgsvgs3ghq52s09wclqk2yy4azz"; depends=[dplyr magrittr purrr Rcpp rlang shiny tibble tidyr]; }; @@ -7592,13 +7920,13 @@ in with self; { infutil = derive2 { name="infutil"; version="1.0"; sha256="02d0hfbkdqjj0lm1fzwwxy60831kbcjn2m4rfblpib0krkbpz72n"; depends=[ltm]; }; ini = derive2 { name="ini"; version="0.3.1"; sha256="04yqij344dwm0xqgara8xia42mlmij3i8711qbb5534w05a1l6bv"; depends=[]; }; injectoR = derive2 { name="injectoR"; version="0.2.4"; sha256="0sa32cspp6y3m04yfmd02kxx55mk7l9jxf4r9pk1a6k3sqnj6fl8"; depends=[]; }; - inlabru = derive2 { name="inlabru"; version="2.1.3"; sha256="09sdbzg3cdg43clkwnahkhyns019gjya55m6zhq340mgrnirx2i5"; depends=[ggplot2 rgdal rgeos sp]; }; + inlabru = derive2 { name="inlabru"; version="2.1.9"; sha256="0jbqk8hcsfgzwr35icqwc6ch0n9v7s812hqwmn3q13l2a4lznm91"; depends=[ggplot2 Matrix rgdal rgeos sp]; }; inline = derive2 { name="inline"; version="0.3.15"; sha256="0s4wssvpan189fijahknxq5s22ww9bzmdlmyhnra748r7khky17z"; depends=[]; }; inlinedocs = derive2 { name="inlinedocs"; version="2013.9.3"; sha256="13vk6v9723wlfv1z5fxmvxfqhaj68h0x3s2qq9j6ickr4wakb4ar"; depends=[]; }; - inlmisc = derive2 { name="inlmisc"; version="0.4.0"; sha256="0hhw87zvqd2mplpbmbh1y91pyfgyqamw4wiz74a6qwn705bcymah"; depends=[checkmate dplyr GA htmltools htmlwidgets igraph knitr leaflet raster rgdal rgeos sp xtable]; }; - inpdfr = derive2 { name="inpdfr"; version="0.1.6"; sha256="0fwznjsq4wccqfnb3a5ic1nyx538jxmlcv59xdz06y6raczjp9q9"; depends=[ca cluster entropart metacom R_devices RColorBrewer SnowballC stringi tm wordcloud]; }; + inlmisc = derive2 { name="inlmisc"; version="0.4.3"; sha256="0y13mxibdnn1397wbxx52gvk213mgslqg40ymcrzgvwb4c7rp8sn"; depends=[checkmate dplyr GA htmltools htmlwidgets igraph knitr leaflet raster rgdal rgeos sp xtable]; }; + inpdfr = derive2 { name="inpdfr"; version="0.1.8"; sha256="1xscrqkwl15l5r1sik6mnhzl868s9yxscm74sp740n3107md92hx"; depends=[ca cluster entropart metacom R_devices RColorBrewer SnowballC stringi tm wordcloud]; }; inplace = derive2 { name="inplace"; version="0.1.0"; sha256="1lmvfjxgficlzxbn953wvfa1n9lys9gqprix6zbqqr4d6vkm0srj"; depends=[Rcpp]; }; - insect = derive2 { name="insect"; version="1.1.0"; sha256="11r21ljif0pwswmmdzbyy3i9q2rwxn7izhr44dkiwcyjv7yig54j"; depends=[ape aphid kmer openssl phylogram xml2]; }; + insect = derive2 { name="insect"; version="1.1.1"; sha256="0gvjml5f7c8k6vsp1s5l85avmh7j6asy2ljkhcrwy6hybf8z1dj5"; depends=[ape aphid kmer openssl phylogram xml2]; }; insideRODE = derive2 { name="insideRODE"; version="2.0"; sha256="1ffndk8761cpkririb3g1qsq9nwmh82lcrpql9i5fksdprvdjzcw"; depends=[deSolve lattice nlme]; }; insol = derive2 { name="insol"; version="1.1.1"; sha256="0zbawkp4qb0kqb7y9ibiyy8sa9rfgbzwmcdswx6s87p0h7brrqn6"; depends=[]; }; inspectr = derive2 { name="inspectr"; version="1.0.0"; sha256="04rpr5ajpdx1d49y327dryxwxk27yljj4c96i9qglf02i9kmplkg"; depends=[openxlsx]; }; @@ -7610,12 +7938,13 @@ in with self; { intRvals = derive2 { name="intRvals"; version="1.0.0"; sha256="0391raj5wq6issvzqm8bfnv1ap2hh5nfsqi9r1x5ss37fvcq5fjm"; depends=[lme4 plyr]; }; intamap = derive2 { name="intamap"; version="1.4-9"; sha256="060sghkqsdrxpa340rvjskh2wafdkffa5q8nlbg1msnsmk639lkn"; depends=[automap doParallel evd foreach gstat MASS mvtnorm rgdal sp]; }; intamapInteractive = derive2 { name="intamapInteractive"; version="1.1-12"; sha256="1h8kzinfpp2rwal11xqs9g99rmigs0jlsr5h0qh0zsill73minid"; depends=[automap gstat intamap rgdal sp spatstat spcosa]; }; - intccr = derive2 { name="intccr"; version="1.0.2"; sha256="1vdrdig82xbg4ax67vsr00v28z40qd54kcw6b8cml59sqn13zxl2"; depends=[alabama doParallel foreach numDeriv]; }; + intccr = derive2 { name="intccr"; version="1.0.3"; sha256="0sk43k8zw2ssa6cc8ljxd51q7489kq1bb2r1j5rp18895kq3c8wc"; depends=[alabama doParallel foreach numDeriv]; }; intcensROC = derive2 { name="intcensROC"; version="0.1.1"; sha256="0qkgp6iw2s772zk2533jsar64f5mqgy4874swgarnfgd4jvkwy2k"; depends=[pracma Rcpp RcppEigen]; }; integIRTy = derive2 { name="integIRTy"; version="1.0.5"; sha256="13p1r3rccsmaqwn0mrskr86jpww72aaq8zf2a8rnbpzkfrq9ni14"; depends=[abind doParallel foreach ltm MASS mclust]; }; interAdapt = derive2 { name="interAdapt"; version="0.1"; sha256="06ki36l1mrnd9lbm696a6gapr488dz8na4wvl9y1fif9hfv4zk25"; depends=[knitcitations knitr mvtnorm RCurl shiny]; }; interactionTest = derive2 { name="interactionTest"; version="1.0.1"; sha256="021qsg9rglc4vj3hkrvfm2snd77zna7ql2i0m5hf77yzxxc35jc6"; depends=[]; }; intercure = derive2 { name="intercure"; version="0.1.0"; sha256="0j71dqcbcfl1zpfidh3xys5h3ggyhrzq3avkdm9v18pv464x8xlv"; depends=[foreach iterators MASS Matrix survival]; }; + interep = derive2 { name="interep"; version="0.1.0"; sha256="1k1pp44sjjdyrbbyv5rlr1whrhmrk2nbn51jrgxxy5i0gwg2jza0"; depends=[glmnet MASS]; }; interferenceCI = derive2 { name="interferenceCI"; version="1.1"; sha256="19ky10nn6ygma6yy5h1krxx61aikh3yx5y39p68a944mz8f72vsn"; depends=[gtools]; }; interflex = derive2 { name="interflex"; version="1.0.4"; sha256="1w92h0ay0rx8gy9jcj179206lz9irg8g0ryl31p3ijqip73v55rm"; depends=[doParallel foreach ggplot2 lfe Lmoments lmtest mgcv pcse Rcpp RcppArmadillo sandwich]; }; interfr = derive2 { name="interfr"; version="0.1.0"; sha256="1wn7i8dsll1qq3v39hgpbqnkjc8f4wlffy73453rw9lpq61y2fgj"; depends=[CircStats colorSpec plotrix]; }; @@ -7632,7 +7961,7 @@ in with self; { intrinsicDimension = derive2 { name="intrinsicDimension"; version="1.1.0"; sha256="0mxg9dvhn5rr1rchpqzf5i1p37kvabcb9jyqbn49zgzcwdvm6cbs"; depends=[yaImpute]; }; introgress = derive2 { name="introgress"; version="1.2.3"; sha256="1j527gf7pmfy5365p2j2jbxq0fb0xh2992hj4d7dxapn4psgmvsk"; depends=[genetics nnet RColorBrewer]; }; intrval = derive2 { name="intrval"; version="0.1-1"; sha256="1p66cjpn43xib7rrnyv3jqr6bb49d3dxf888p8hxnr7kx9wfalkn"; depends=[]; }; - intsvy = derive2 { name="intsvy"; version="2.1"; sha256="0fsib9w1zvg3phmzrspdc3d44rl5p222j0j9xmdhpcq9r6sy0bp9"; depends=[foreign ggplot2 Hmisc memisc plyr reshape]; }; + intsvy = derive2 { name="intsvy"; version="2.3"; sha256="1hm7jkh8p3hspbb20185zgs5y4c3zp9wvj02m0s67qiq8sf5nv0h"; depends=[foreign ggplot2 Hmisc memisc plyr reshape]; }; intubate = derive2 { name="intubate"; version="1.0.0"; sha256="03ikqwai7wdahdfyzdy42xs8qpdhl9gmbak2qd82yxjl62956i8c"; depends=[]; }; inum = derive2 { name="inum"; version="1.0-0"; sha256="1b013ak4d0iiwk5a0s7vvsl34d0hs881iq7zrvah4skb89x82cpm"; depends=[libcoin]; }; invGauss = derive2 { name="invGauss"; version="1.1"; sha256="0l93pk2sh74dd6a6f3970nval5p29sz47ynzqnphx0wl3yfmmg9c"; depends=[optimx survival]; }; @@ -7640,13 +7969,15 @@ in with self; { investr = derive2 { name="investr"; version="1.4.0"; sha256="0l47bfwxssfr3maprkpwnmgxnxccl3ch4grc7f968iiqk83mcxw9"; depends=[nlme]; }; invgamma = derive2 { name="invgamma"; version="1.1"; sha256="12ga2y4wc9bc5zz6vimvxwgjpsx3ys3209nq63gscbw559ydxa5a"; depends=[]; }; io = derive2 { name="io"; version="0.3.0"; sha256="16mnbxq217ixfg2qfqrj97qqfpc5dj622hf80nwray6hp47lbw2s"; depends=[filenamer stringr]; }; + ioanalysis = derive2 { name="ioanalysis"; version="0.1"; sha256="13hkcks9sm7swmvd1lzzz5gqs02mjdqhrx06f7bkbf77dxckxb8z"; depends=[]; }; ioncopy = derive2 { name="ioncopy"; version="2.1.1"; sha256="1lkav3xvh2qazfmcxwisrjy8wzf639a4md71499jj5rmy650crys"; depends=[shiny]; }; ionflows = derive2 { name="ionflows"; version="1.1"; sha256="1k9yz82hbjwljyg4cmi675ppykrc2yq9md8x1hhkfxmp070whcxl"; depends=[Biostrings]; }; ionr = derive2 { name="ionr"; version="0.3.0"; sha256="18rv5n5gihb6pz36s45yj17sdjsbj4485k4lnggdjj1gbbjkz2ni"; depends=[gplots psych]; }; iopsych = derive2 { name="iopsych"; version="0.90.1"; sha256="0adxwxnb1zdlld3icdggx7cq6cp8z4h1jf105485w322a8c6s9ik"; depends=[mco mvtnorm]; }; iosmooth = derive2 { name="iosmooth"; version="0.94"; sha256="06xgzhjgb6pznjzfli193q7kn8sh5jmqsssgymwj98bw7iwn4q3z"; depends=[]; }; - iotables = derive2 { name="iotables"; version="0.2.4"; sha256="17xw0xjj6xy99f41ln043agaqcw6q3s0i99as06471kyscgan8n7"; depends=[dplyr eurostat forcats magrittr plyr tidyr]; }; + iotables = derive2 { name="iotables"; version="0.3.4"; sha256="08hw05samkkdvpbhjqr653brmciszah5faydiqvrdgl02yvjmdw4"; depends=[dplyr eurostat forcats lubridate magrittr plyr tidyr]; }; iotools = derive2 { name="iotools"; version="0.2-5"; sha256="0rn6kvlcijnhlwajh6nmi80qlamxgz0x3pn09yp4hyfpl3zxg1fz"; depends=[]; }; + ipc = derive2 { name="ipc"; version="0.1.0"; sha256="1y2py1ihh414vsjppy2qw9b4m0yn5mrbi5y69p9d6akj5bm61833"; depends=[R6 redux shiny txtq]; }; ipdmeta = derive2 { name="ipdmeta"; version="2.4"; sha256="0k9wqpmrvqdh73brmdzv86a2dbyddjyyyqzqgp1vqb3k48k009s2"; depends=[nlme]; }; ipdw = derive2 { name="ipdw"; version="0.2-6"; sha256="1jfixvywxdhnpqz62ld2c8n6yacg88q3y1n1aisqqb7szz0zf23z"; depends=[gdistance raster sp]; }; ipeaData = derive2 { name="ipeaData"; version="0.0.2"; sha256="1nggkcb8rrnc3d14nhzpf48f2dpf6jcsw54i40jcp7656jqv1jnb"; depends=[data_table dplyr httr jsonlite RCurl]; }; @@ -7654,16 +7985,16 @@ in with self; { ipfp = derive2 { name="ipfp"; version="1.0.1"; sha256="12aklhf9p70r9b2wi0qgbl835b4lil805c31n1ka4kdix4b4cpr4"; depends=[]; }; ipft = derive2 { name="ipft"; version="0.7.2"; sha256="0jifmkwac5yfl110200ljm3pas3321j068af9xqzqs0av20m8hps"; depends=[apcluster cluster dplyr ggplot2 Rcpp]; }; iplots = derive2 { name="iplots"; version="1.1-7.1"; sha256="1bz8n9cnx6zy3wsr49h55r0l5ikfl0xjg4r76fi4giid2a3ba4lf"; depends=[png rJava]; }; - ipred = derive2 { name="ipred"; version="0.9-6"; sha256="1vrw1pqcpnc04x1r2h9grdfm6bivs358sww5gg90jwlvxcw69lxq"; depends=[class MASS nnet prodlim rpart survival]; }; - iprior = derive2 { name="iprior"; version="0.7.1"; sha256="01sav9594grc413kf6s9jnp4hs4q9f9424qphm91xckydiqisaav"; depends=[doSNOW foreach ggplot2 mvtnorm Rcpp RcppEigen reshape2 scales]; }; + ipred = derive2 { name="ipred"; version="0.9-7"; sha256="0q53cqs46501wsd4cmfsmr78l8nv1hkbamk9m0ns5qy02df5r254"; depends=[class MASS nnet prodlim rpart survival]; }; + iprior = derive2 { name="iprior"; version="0.7.2"; sha256="1wc7f6gh0qas197jf78pb8wmazhddbny3l0w47f3v6fqwa581ls0"; depends=[doSNOW foreach ggplot2 mvtnorm Rcpp RcppEigen reshape2 scales]; }; ips = derive2 { name="ips"; version="0.0-7"; sha256="0r4394xbchv6czad9jz4ijnfz8ss3wfdvh7ixrdxic2xrw0ic90v"; depends=[ape colorspace XML]; }; - iptmnetr = derive2 { name="iptmnetr"; version="0.1.2"; sha256="1m5rw66qbv5pa91ywvir2i0wnwa0j6z75242bc468d2hakz62k99"; depends=[httr jsonlite]; }; - iptools = derive2 { name="iptools"; version="0.4.0"; sha256="0c3j5sl129xl75p14qr880ll1y3yss3zqg39zbj2jp6wcv9rvafx"; depends=[AsioHeaders BH ISOcodes Rcpp]; }; - ipumsr = derive2 { name="ipumsr"; version="0.2.0"; sha256="0rmcl2jq12yvc5lqyi1mi5ggl59w2g6zvf3w1zpnb261vlrvikda"; depends=[dplyr haven purrr raster Rcpp readr rlang stringr tibble tidyr xml2 zeallot]; }; + iptmnetr = derive2 { name="iptmnetr"; version="0.1.5"; sha256="02lljbbr2sm90sgyjv6a17mbh758n93qqxfr900g0m557nsv35i8"; depends=[httr jsonlite]; }; + iptools = derive2 { name="iptools"; version="0.6.0"; sha256="1k58czfq8g2q1gjxnhkxhr0znqmmyyaz45vffd57pdq1199wcdm1"; depends=[AsioHeaders BH Rcpp stringi triebeard]; }; + ipumsr = derive2 { name="ipumsr"; version="0.3.0"; sha256="114q2j6sadzg4s1jc66sxasj86hsipmf874dbhk1z238wj948py8"; depends=[cli crayon dplyr haven hipread pillar purrr R6 raster Rcpp readr rlang stringr tibble tidyr xml2 zeallot]; }; ipw = derive2 { name="ipw"; version="1.0-11"; sha256="11a34j6lp329ran2r9kxn8184kfmibkdig74lsy6lj4w4w0d71cm"; depends=[geepack MASS nnet survival]; }; ipwErrorY = derive2 { name="ipwErrorY"; version="1.0"; sha256="1n1j1crxnnfkg38drgg8rhc13y6s8hcsr5g0f6hi4v680dgrkhmp"; depends=[nleqslv]; }; iqLearn = derive2 { name="iqLearn"; version="1.5"; sha256="1zn43zvx0mjzh96bm73scacmladamy8jmhxim7hcfq39cfhiw3c8"; depends=[]; }; - irace = derive2 { name="irace"; version="3.0"; sha256="1p7amffds888zfg05lfkmvl2ciydmf8bn42g2kgfy13k9r2bk96r"; depends=[]; }; + irace = derive2 { name="irace"; version="3.1"; sha256="0r3hbsx8c40kxs62xy3pnivy6ava2xrg0h39j95zrmiqdma77sxq"; depends=[]; }; ircor = derive2 { name="ircor"; version="1.0"; sha256="07apa4l4ib11xw25d44b403s3la29sqlid13q41hjrlfxafm91ld"; depends=[]; }; irlba = derive2 { name="irlba"; version="2.3.2"; sha256="0f7wb12wa0zbyllk5adcf4f517wgjpkhsx4j176i9ax6xy7jvprz"; depends=[Matrix]; }; irr = derive2 { name="irr"; version="0.84"; sha256="0njxackqj8hyf9j1yszwxbnaxgp27fc2bwyyf7dip72wc12f81n5"; depends=[lpSolve]; }; @@ -7676,7 +8007,7 @@ in with self; { irtreliability = derive2 { name="irtreliability"; version="0.1-1"; sha256="15qs8bvgrwajj5kfd57rd34l1p2805ilyd7w60ngrqc14d6az9d2"; depends=[fastGHQuad ltm mirt]; }; isa2 = derive2 { name="isa2"; version="0.3.5"; sha256="17vm0906szhrh2k5x694vwcfijbzmd1v3axpszfybc0lgds437cv"; depends=[lattice]; }; isdals = derive2 { name="isdals"; version="2.0-4"; sha256="15p432fskdz2r8523cw122mfhvrq8vdsdsrd0kz9yfin4b5z3zfh"; depends=[]; }; - isdparser = derive2 { name="isdparser"; version="0.2.0"; sha256="061wi94rj3iyvf3dgvcjy0x46hvwhr4ifx0jhirz44bj0c8g3h7j"; depends=[data_table tibble]; }; + isdparser = derive2 { name="isdparser"; version="0.3.0"; sha256="1fdp4zk3pzpi5m026rlsrhyl4r5rfxy9sr8d04w2i0316rziv7kc"; depends=[data_table tibble]; }; isingLenzMC = derive2 { name="isingLenzMC"; version="0.2.5"; sha256="1pd1s3a1rv7vlxd5db1pgwdjps8w5im4zz2h3qzal9cwbis0hb51"; depends=[]; }; island = derive2 { name="island"; version="0.2.1"; sha256="0fg5nlg5iq3cl3i8xx9qq4vvizdklg6adjxmp2qrg0dyfvkllhsq"; depends=[]; }; ismev = derive2 { name="ismev"; version="1.42"; sha256="19giigxwf62cdkf7mglsca649n2ignb9bxyg9zl7im1vm3ngnmqd"; depends=[mgcv]; }; @@ -7694,15 +8025,16 @@ in with self; { itan = derive2 { name="itan"; version="1.0"; sha256="082vh5gvh8hgyhk8nswll16ldhnp0pfpxnz1yx05zsc4nzvm92cf"; depends=[ggplot2 reshape]; }; itcSegment = derive2 { name="itcSegment"; version="0.8"; sha256="032wj34313m3wigdfalq356srdzg0cvnvxnaxwxws6bc44r78izf"; depends=[maptools raster rgeos sp]; }; iteRates = derive2 { name="iteRates"; version="3.1"; sha256="1dycmlm3vldc60wz2jjdfbla14383911zfahgal5mx8whxwq95c5"; depends=[ape apTreeshape geiger gtools MASS partitions VGAM]; }; + itemanalysis = derive2 { name="itemanalysis"; version="1.0"; sha256="1ksbd69mca45jlr2gpars87cf4jfm5rx6sz009sv6a83x831x5rq"; depends=[car ggplot2 polycor]; }; iterLap = derive2 { name="iterLap"; version="1.1-3"; sha256="079d4hxf1ha8pgibzb4r1yk7xqpzndd7hjbp8294qb26jvvcnd8q"; depends=[quadprog randtoolbox]; }; - iterators = derive2 { name="iterators"; version="1.0.9"; sha256="16sycjq912ix52fjxjhcwiaqr0yj1v5iqmrvjljd3z857031w06y"; depends=[]; }; - iterpc = derive2 { name="iterpc"; version="0.4.0"; sha256="0py11pvhl71v9fl0a6n317va8cggih4l0afn6yldnah9ai2cakvy"; depends=[arrangements gmp iterators]; }; + iterators = derive2 { name="iterators"; version="1.0.10"; sha256="1s3iykfvccpnzs73z90rx18qvbvgw2dgl4nfcrvm5m1850qb5qd9"; depends=[]; }; + iterpc = derive2 { name="iterpc"; version="0.4.1"; sha256="0q08bdr5v849z2431f2sdh9f7aagjxm34si0kn0bp85dnlqri8rx"; depends=[arrangements gmp iterators]; }; itertools = derive2 { name="itertools"; version="0.1-3"; sha256="1ls5biiva10pb1dj3ph4griykb9vam02hkrdmlr5a5wf660hg6xn"; depends=[iterators]; }; itertools2 = derive2 { name="itertools2"; version="0.1.1"; sha256="0yra3x9ddvn5pp3jibm69205zazv81bz0cflw4mdvxpqadaf9f96"; depends=[iterators]; }; itree = derive2 { name="itree"; version="0.1"; sha256="164zgr142hcp9plnbccs6m823p4m0prk73bvp54bc7bqnqmc3d9a"; depends=[]; }; itsadug = derive2 { name="itsadug"; version="2.3"; sha256="0wzdy82h05264n9cr84w5j98vz24was9hh1y0wdp56ws3dfbav9m"; depends=[mgcv plotfunctions]; }; - itsmr = derive2 { name="itsmr"; version="1.8"; sha256="1w2sjdw9s4smsqdbjabj9jjync0fb931aajjbqhm49cx0g72hi8g"; depends=[]; }; - itunesr = derive2 { name="itunesr"; version="0.1.1"; sha256="1h6yyqcmvm9dfwscmq5ghqi3r4fdracw1n206058j9bdjpakxqkl"; depends=[curl jsonlite lubridate xml2]; }; + itsmr = derive2 { name="itsmr"; version="1.9"; sha256="0dmijaq6q31irwrjqv5gq1yfbgggwb3m6rwbg4lx1r9l3cqays7i"; depends=[]; }; + itunesr = derive2 { name="itunesr"; version="0.1.3"; sha256="1czwkrqy3jqw1x0z5zj2kvp4p11s5zdiswwhx9jfxdcsg86zhr45"; depends=[curl jsonlite lubridate xml2]; }; ivbma = derive2 { name="ivbma"; version="1.05"; sha256="0d7kg6pkdx1aj1i6kqs2r7j1klxxwymml63qnrq6a6fia3ck9kk9"; depends=[]; }; ivfixed = derive2 { name="ivfixed"; version="1.0"; sha256="0a26zrkvz0ffq4zxdx5vhr1nvsi9c15s6gvc1zy2pddjz31x2xi5"; depends=[Formula]; }; ivlewbel = derive2 { name="ivlewbel"; version="1.1"; sha256="0ykcfikm2i28s3fm6zzx8cjvpwhksg8an0rfr0b35gf7p69brgag"; depends=[gmm lmtest plyr]; }; @@ -7716,56 +8048,66 @@ in with self; { jaatha = derive2 { name="jaatha"; version="3.2.0"; sha256="00886j0cabrq6a69w8s1gsfkmx1wqs1vpxjafpm71msk54r0dj55"; depends=[assertthat R6]; }; jaccard = derive2 { name="jaccard"; version="0.1.0"; sha256="1dmla6qc1k8iw2d7zfjqhf13gqd2lpsrj09yh47ljf994fpab936"; depends=[dplyr magrittr qvalue Rcpp]; }; jackknifeKME = derive2 { name="jackknifeKME"; version="1.2"; sha256="0c5shl6s46kz7a623gccqk2plrrf2g29nwr6vbny6009pq3jvzam"; depends=[imputeYn]; }; - jackstraw = derive2 { name="jackstraw"; version="1.1.1"; sha256="18iah8sq64p7c6rxs21w8rbxvbmbh03jzqbam1ilp46ayfqzk9qc"; depends=[corpcor lfa]; }; + jackstraw = derive2 { name="jackstraw"; version="1.2"; sha256="1aciv0km63nqhiakqvy3v8bz31mjlknfdz2lkcv2g3pfhwi3fxh7"; depends=[cluster ClusterR corpcor lfa qvalue]; }; jacpop = derive2 { name="jacpop"; version="0.5"; sha256="056c82d4a10rgq0p4p63y9i94dy1kqp3yh7xms9nx9q2xb940xb5"; depends=[]; }; - jagsUI = derive2 { name="jagsUI"; version="1.4.9"; sha256="1c2fq7q3kvf092j6r9ci0gigjpb61dj19phzm8mqi05q2k08siin"; depends=[coda lattice rjags]; }; + jagsUI = derive2 { name="jagsUI"; version="1.5.0"; sha256="0cfixhv4fabka13xvnglwacgpadhdr12w6lk563zfz83192r7h8g"; depends=[coda lattice rjags]; }; james_analysis = derive2 { name="james.analysis"; version="1.0.1"; sha256="1b2n4ds4ivfk564z87s2rxjl9j0y4drd3cmyv8jqpccmdvx1137d"; depends=[naturalsort rjson]; }; janeaustenr = derive2 { name="janeaustenr"; version="0.1.5"; sha256="1wyn4qc28a3sval8shmyi2d7s4nl3jh96s8pzq871brxcmrncbwr"; depends=[]; }; - janitor = derive2 { name="janitor"; version="1.0.0"; sha256="0q6mq8s8k7yyx2459nhjvlxjaqxn61k3dpxdhcq0fyk37dafva79"; depends=[dplyr magrittr purrr rlang snakecase tidyr]; }; + janitor = derive2 { name="janitor"; version="1.1.1"; sha256="0sqp6sajdzs8wwvsfkkfpgak9fzknjfffqpgjm6an7spdvsl2js0"; depends=[dplyr magrittr purrr rlang snakecase tidyr]; }; jaod = derive2 { name="jaod"; version="0.1.0"; sha256="0wh1nlfhks4c1dga6h7554pg44pamj73x5in71k2xw0yp292zm6x"; depends=[crul jsonlite tibble]; }; + jarbes = derive2 { name="jarbes"; version="1.7.0"; sha256="1wvix7a1wv6mb4i1r3axixyvrwg6sj5pnc22ajri0d3dbdmklv23"; depends=[ggExtra ggplot2 gridExtra MASS mcmcplots R2jags rjags]; }; jcext = derive2 { name="jcext"; version="0.1"; sha256="18vmf57l2kv3rvi6laqp948m8mjkdxdy0vi4xp68480b2mjmvij1"; depends=[ggplot2 maps RColorBrewer rworldmap sp stringr]; }; - jcolors = derive2 { name="jcolors"; version="0.0.2"; sha256="0d71sdvj7hwafj0sx2z1nyza5j2lfd8y5yj1p94yrw32wi7b89jn"; depends=[ggplot2 scales]; }; + jcolors = derive2 { name="jcolors"; version="0.0.3"; sha256="1mzpvm5mhmr2ahwz1lnqvp1cs805jh0zlfwspvqwr0sfbzmmkrib"; depends=[ggplot2 scales]; }; jdx = derive2 { name="jdx"; version="0.1.3"; sha256="0d9m0sbdrlh8jfijn5mrfw8y2bpj5vxm0bcjlcc42ipxj47962l9"; depends=[rJava]; }; - jeek = derive2 { name="jeek"; version="1.1.0"; sha256="0s5gsgsznn8n39s0s35qxdl0q7bkvqlrf9xhland3xlzcrvpyp2g"; depends=[igraph lpSolve pcaPP]; }; + jeek = derive2 { name="jeek"; version="1.1.1"; sha256="15n0k0i1wwp72g8zqrjmglnckab3p65q3rnpg6d6h8hjcpv82i7g"; depends=[igraph lpSolve pcaPP]; }; + jetpack = derive2 { name="jetpack"; version="0.3.1"; sha256="13m555bdx4f57wy3lxgllhrbd2x7vwvblvms6yajsdpv0x6g7n1x"; depends=[crayon desc devtools docopt httr packrat]; }; jetset = derive2 { name="jetset"; version="3.4.0"; sha256="0c99h5npsv2gf5d59s4qhkaqmjhbwa3prcykk24wzhnpfq6y6xhp"; depends=[AnnotationDbi org_Hs_eg_db]; }; jiebaR = derive2 { name="jiebaR"; version="0.9.99"; sha256="1g39z9ms975ig2j9nd6nqja1l8gy50fa9pwlz563xk6p2z6v058j"; depends=[jiebaRD Rcpp]; }; jiebaRD = derive2 { name="jiebaRD"; version="0.1"; sha256="1wadpcdca4pm56r8q22y4axmqdbb2dazsh2vlhjy73rpymqfcph4"; depends=[]; }; + jipApprox = derive2 { name="jipApprox"; version="0.1.1"; sha256="0kgx7v8fyfdh8kdz8jnh6y6zrf7ivgqjgagpddxnynldzcrc2ml7"; depends=[sampling]; }; + jjb = derive2 { name="jjb"; version="0.1.0"; sha256="0izpvban8v85g6w2mnmimhdh4yg6kcaf046v3jjba368nsj67q9n"; depends=[]; }; jmcm = derive2 { name="jmcm"; version="0.1.8.0"; sha256="0nv30shwd1219cvs9kaql0n7ppwqngj3avf2qd7nzrnbqp2gl23h"; depends=[Formula Rcpp RcppArmadillo]; }; jmdem = derive2 { name="jmdem"; version="1.0"; sha256="1qz2l02m4gnxrm1ankr5qqlskl8amphzj8r763yas218fvzfa34q"; depends=[statmod VGAM]; }; + jmdl = derive2 { name="jmdl"; version="0.3.0"; sha256="0167yj368lh1n79jwbqs4g2asb67hfmgh97519linmfpx0n6xdpa"; depends=[boot Formula MASS minqa mnormt mvtnorm]; }; jmetrik = derive2 { name="jmetrik"; version="1.1"; sha256="1if1kxx8apgkbxpkjnlj2lpsfnyj2splsg1p3j5vxa7q6wx70f9j"; depends=[]; }; jmotif = derive2 { name="jmotif"; version="1.0.3"; sha256="1llmrksajrd35kfdzq2vqfm17yv5kwark6gz3rvyzcmbrqk5spqv"; depends=[Rcpp RcppArmadillo]; }; jmuOutlier = derive2 { name="jmuOutlier"; version="1.4"; sha256="1vrihjvq8l2q7d3z80fkzzzwg6xmnfi8sipsgwic1lcbv6vnqndp"; depends=[]; }; - jmv = derive2 { name="jmv"; version="0.8.6.2"; sha256="0an3ni6lz85cfcra69mycka6x1hgaas6rv6ybbnikmrv846sx03n"; depends=[afex BayesFactor car emmeans GGally ggplot2 ggridges GPArotation jmvcore lavaan MASS multcomp mvnormtest nnet PMCMR psych R6 ROCR vcd vcdExtra]; }; - jmvcore = derive2 { name="jmvcore"; version="0.9.1"; sha256="01qv3m1vsabydlkshmqrg15y8nnrzkg49pq2ryxi3r6jw486qq1s"; depends=[base64enc R6 rjson stringi]; }; + jmv = derive2 { name="jmv"; version="0.9.4"; sha256="141k86skmkfl3pxgay5mginpishnwy3k40cxrj2qbkrzlnx1b9yk"; depends=[afex BayesFactor car emmeans GGally ggplot2 ggridges GPArotation jmvcore lavaan MASS multcomp mvnormtest nnet PMCMR psych R6 ROCR vcd vcdExtra]; }; + jmvconnect = derive2 { name="jmvconnect"; version="1.0.4"; sha256="1zbhinnd8ngq1824lj3610s1v0vzxjbsvgb7p0q0bjdr3gdpc4n9"; depends=[BH evaluate httr jmvcore rappdirs Rcpp]; }; + jmvcore = derive2 { name="jmvcore"; version="0.9.4"; sha256="1m47yn81y2g3kba16dn7s3jfw8pp4rzbrlqr3nmdrivp093fqcn3"; depends=[base64enc R6 rjson stringi]; }; jocre = derive2 { name="jocre"; version="0.3.3"; sha256="1i9n3r16pq6r4sy3fc1rxpil5ws8v2is0xdxafinvwr1hzkv1gz6"; depends=[boot KernSmooth plyr TSP]; }; joinXL = derive2 { name="joinXL"; version="1.0.1"; sha256="1l76bckjz5r1kdsh0s10i0gpca12rkfkp14346fn7avdcw73v23i"; depends=[data_table openxlsx R_utils rChoiceDialogs Rcpp readxl rJava timeDate timeSeries]; }; joineR = derive2 { name="joineR"; version="1.2.4"; sha256="05wr7gr3mnsfj8a1m5v1b71gh3fc4pyhj6rqapls7iwrkywbf1b6"; depends=[lattice MASS nlme statmod survival]; }; joineRML = derive2 { name="joineRML"; version="0.4.2"; sha256="06a7iicq3fngsmmi8qcz2fdzdzvym5s70s3aaqlzxnl4sj9km3g2"; depends=[cobs doParallel foreach ggplot2 lme4 MASS Matrix mvtnorm nlme randtoolbox Rcpp RcppArmadillo survival]; }; joineRmeta = derive2 { name="joineRmeta"; version="0.1.1"; sha256="0d9wwb3v43v30xjy67j366mhwixzz79bm67j01fqmcdsnmn3qpjn"; depends=[ggplot2 gridExtra gtools JM joineR lme4 MASS Matrix meta msm nlme statmod survival]; }; - joint_Cox = derive2 { name="joint.Cox"; version="2.15"; sha256="1lcli1p1qv0ws1zqs845wb2swhm5vvbixsxs8yzihc5r7igyalg7"; depends=[survival]; }; + joint_Cox = derive2 { name="joint.Cox"; version="2.16"; sha256="1qlynvahk57ayndc23i0jr8a702z4k1darf4y5i90lza40f32jhp"; depends=[survival]; }; jointDiag = derive2 { name="jointDiag"; version="0.3"; sha256="0pra70jcnkqkzrxz5vc6lzi637rp5w8n9wbv9ix718vnd0j3fm3n"; depends=[]; }; jointNmix = derive2 { name="jointNmix"; version="1.0"; sha256="0ibh7hqkpzlfk3bk4d2dd64jhr8cvw563k082vwnljiam7k5nj4b"; depends=[]; }; jointPm = derive2 { name="jointPm"; version="2.3.1"; sha256="1c2cn9sqwfyv9ksd63w8rrz0kh18jm2wv2sfdkgncjb7vfs4hbv9"; depends=[]; }; jointseg = derive2 { name="jointseg"; version="1.0.1"; sha256="0wa531b5shrxhnzflfjqn2wypfb565qc2c8wngysgrgyj1kjq1pl"; depends=[acnr DNAcopy matrixStats]; }; - jomo = derive2 { name="jomo"; version="2.6-2"; sha256="0zyqwa2y08asj9xqwnngh6da1b9cqcx8pzc9cxwrmgnxd5nnsjb7"; depends=[lme4 survival]; }; + jomo = derive2 { name="jomo"; version="2.6-4"; sha256="05g2rj9g7rgyb22b0gybw042nydyqsqsb31v05hifzavri8ij01x"; depends=[lme4 MASS ordinal survival]; }; jose = derive2 { name="jose"; version="0.2"; sha256="0vgmr5kmps6yk10bbzrxz2d3y7jk0w1rxpm9gx510kpnqbj325xz"; depends=[jsonlite openssl]; }; jpeg = derive2 { name="jpeg"; version="0.1-8"; sha256="05hawv5qcb82ljc1l2nchx1wah8mq2k2kfkhpzyww554ngzbwcnh"; depends=[]; }; jpmesh = derive2 { name="jpmesh"; version="1.1.1"; sha256="0smfv7wh0441aqx0c0km0kr54lsvqixn2chqvqn5sd3758k5id95"; depends=[leaflet magrittr miniUI purrr rlang sf shiny tibble units]; }; jpndistrict = derive2 { name="jpndistrict"; version="0.3.2"; sha256="0n935zwxjjnl1w0xd790gm22pdm8ng48x79iazfkjzj8dpwymdsg"; depends=[dplyr jpmesh leaflet magrittr miniUI purrr rlang sf shiny tibble tidyr]; }; - jqr = derive2 { name="jqr"; version="1.0.0"; sha256="1jdr3wb1fd2zjmmdicqhskgk7xbn5y6998fi9szj86p8smfckl74"; depends=[lazyeval magrittr]; }; + jqr = derive2 { name="jqr"; version="1.1.0"; sha256="00x5a61bsn2ywzc2haz19f6h0sqhlx7z3k1n9y0729dwm4id89ms"; depends=[lazyeval magrittr]; }; jrich = derive2 { name="jrich"; version="0.60-35"; sha256="1y486bfqmfg3f22wm0lfk3lh20ljgi8qrgn5jji0f417wh48nf0x"; depends=[ape]; }; jrvFinance = derive2 { name="jrvFinance"; version="1.4.0"; sha256="09gr8w3y0cjlwjhr72ml05y22m868hnvxwa3mwxdcvfb7nb1dmxz"; depends=[]; }; js = derive2 { name="js"; version="1.1"; sha256="1xsdr14k4djcd1nqybvfzhviics4igsj8yz3r0j2nqhin2wjynlf"; depends=[V8]; }; jsTree = derive2 { name="jsTree"; version="1.0.1"; sha256="0n754illyw29bprll676k9qm5vk5h8qss6gb8lls57kdzj51x2jz"; depends=[data_table htmlwidgets jsonlite]; }; + jsonify = derive2 { name="jsonify"; version="0.1.1"; sha256="0z6af6sxzybm6jy350pn0g16mm3kzwb6vkf3qa6r20ca2rb2kynh"; depends=[rapidjsonr Rcpp]; }; jsonld = derive2 { name="jsonld"; version="2.0"; sha256="0mplsx2fq7pvxli1rd851cqhkaxk3y93aa46x57yf4z5rgjy34vm"; depends=[curl jsonlite V8]; }; jsonlite = derive2 { name="jsonlite"; version="1.5"; sha256="00lfg464jhf7k01bal9pcjvbdf5cxk6xi2h46hccp1x3h883g434"; depends=[]; }; + jsonstat = derive2 { name="jsonstat"; version="0.0.2"; sha256="0p0d3snl1971p5ikrkmwqrjjh4fy0b89qk3rnd1dayfb0r80xnnj"; depends=[cli dplyr jsonlite rlang]; }; jsonvalidate = derive2 { name="jsonvalidate"; version="1.0.0"; sha256="08c1s8fk95np4l6km077dmd1nibhhggi80f5465hhbq521gm0awl"; depends=[V8]; }; jsr223 = derive2 { name="jsr223"; version="0.3.2"; sha256="00i90b37811sva8f9bd50xxvjcn7rag9hq5ya953v6whm370r737"; depends=[curl jdx R6 rJava]; }; + jstor = derive2 { name="jstor"; version="0.3.4"; sha256="1fqnvhisv4kf3anck2zfrkg2g46y78hh3y47xhg79p6gcc2cxx2i"; depends=[cli crayon dplyr furrr magrittr pryr purrr readr rlang stringr tibble tidyr xml2]; }; jtGWAS = derive2 { name="jtGWAS"; version="1.5.1"; sha256="06cgsncgrqslxcc7s0lb3zwa85bhzkmjzz3f04716xpzwa186vxq"; depends=[Rcpp]; }; - jtools = derive2 { name="jtools"; version="1.0.0"; sha256="0w0yw0pl2arwx4d5w83d73y7cq9papqkdg6sfk9qj1whgcd28chv"; depends=[cli crayon ggplot2]; }; + jtools = derive2 { name="jtools"; version="1.1.1"; sha256="0c7ygllgq5vyb4w188l44f5q8bn1jn2kw3yvc1f1zi0ni1ngsf7g"; depends=[cli crayon ggplot2 magrittr]; }; jtrans = derive2 { name="jtrans"; version="0.2.1"; sha256="18zggqdjzjhjwmsmdhl6kf35w9rdajpc2nffag4rs6134gn81i3m"; depends=[]; }; + jubilee = derive2 { name="jubilee"; version="0.2.5"; sha256="0j16325vxlr797gr39g6mdrgfas1qvxhajfsrmzr4hflqibw03gk"; depends=[data_table readxl xts yaml zoo]; }; jug = derive2 { name="jug"; version="0.1.7"; sha256="01m6hyr26f6zih49pz2bmmr8ypdl1qiz0wv3padcy68kaccf44a4"; depends=[base64enc httpuv infuser jsonlite magrittr mime R6 webutils]; }; - junctions = derive2 { name="junctions"; version="1.0.1"; sha256="1mfzhizfzpsrlc23kdi658a1svw4p3wh1la7zpf5fk2bbksw0v97"; depends=[Rcpp]; }; + junctions = derive2 { name="junctions"; version="1.1"; sha256="1v5jx4mw6x4q3fivsvidd49b8czzbvv5icj39h6jrpmqvrnc8w32"; depends=[Rcpp]; }; junr = derive2 { name="junr"; version="0.1.3"; sha256="0wcglpziyi6z4n7w70srziljba3jkb27iqxbxz4kk6774c7valbf"; depends=[httr jsonlite]; }; jvnVaR = derive2 { name="jvnVaR"; version="1.0"; sha256="0zh0dc6wqlrxn5r2yv9vkpyfb8xsbdidkjv9g6qr94fyxlbs4yci"; depends=[]; }; jwutil = derive2 { name="jwutil"; version="1.2.1"; sha256="1n9q2p167cmp134p8qpknfg4avi4nzxqmazyr1gs63sk5x51yk48"; depends=[Rcpp testthat]; }; @@ -7793,41 +8135,42 @@ in with self; { keep = derive2 { name="keep"; version="1.0"; sha256="12803hhrs9v94rv6qaihk1f1ls7lx4cy2pa30v4p1r2z9afx9bjf"; depends=[]; }; kehra = derive2 { name="kehra"; version="0.1"; sha256="1cc0bmbg0dncay50ap7cs2516qngzz3ddaab0jk5r6lwfq87h8qx"; depends=[Hmisc raster reshape2 sp stringr xts zoo]; }; kelvin = derive2 { name="kelvin"; version="2.0-0"; sha256="04xdgpmysksm79m3vqmb4zra3pq09nv99w4fbdla1lmy7z8pkdrk"; depends=[Bessel]; }; - kendallRandomWalks = derive2 { name="kendallRandomWalks"; version="0.9.2"; sha256="1h02394gq8cmz7bw6k2yg4qjzmns7i6bzafkdw3x9ycf4d9l6p80"; depends=[dplyr EnvStats ggplot2 nleqslv tibble tidyr]; }; + kendallRandomWalks = derive2 { name="kendallRandomWalks"; version="0.9.4"; sha256="1mfqblvsn9p6gdcnbypfpzk0xzn6bz1ajbrkz2dap5w35dia3kxa"; depends=[actuar dplyr ggplot2 tibble]; }; kequate = derive2 { name="kequate"; version="1.6.1"; sha256="1rjya1rnlfk2ziiwhkgshlyk3g0388591q3q01a3vgmgsb3cpxl6"; depends=[equateIRT ltm mirt]; }; - keras = derive2 { name="keras"; version="2.1.6"; sha256="1xgxf9xg8b7dpnbc5dnysd4s2n74877s16f353hrbybf6m768kik"; depends=[magrittr R6 reticulate tensorflow tfruns zeallot]; }; + keras = derive2 { name="keras"; version="2.2.0"; sha256="0h6rx44c7w0d8gvnchbqfblqmayh47v14vg6ilnfkcb35djws3la"; depends=[magrittr R6 reticulate tensorflow tfruns zeallot]; }; kerasR = derive2 { name="kerasR"; version="0.6.1"; sha256="1yi7710vgcwz0jhishbga41sc6qyk83a0avmq01dvqjsz3cdfsfc"; depends=[reticulate]; }; - kerasformula = derive2 { name="kerasformula"; version="1.0.0"; sha256="1hhzrrg4ryajzlih8wj2j0z3wb0ksi5zycaf9njvbd0jvfxxbzdy"; depends=[dplyr keras Matrix]; }; + kerasformula = derive2 { name="kerasformula"; version="1.5.1"; sha256="1b4mq1y41lz8maszlrm7w907vcz7in8napfnhas7dgal1kid4mcf"; depends=[dplyr ggplot2 keras Matrix]; }; kerdiest = derive2 { name="kerdiest"; version="1.2"; sha256="16xj2br520ls8vw5qksxq9hqlpxlwmxccfk5balwgk5n2yhjs6r3"; depends=[chron date evir]; }; - kergp = derive2 { name="kergp"; version="0.2.0"; sha256="1xamj19v84m1f9ls8ac8xbm6airyjf96i1l48yy4l2rvjdmx6m9l"; depends=[doParallel MASS numDeriv Rcpp testthat]; }; + kergp = derive2 { name="kergp"; version="0.4.0"; sha256="0b5milibiacxmflrbddl6fjkc54cv0q5w8dqpxikx2vly4as9g5z"; depends=[doFuture doParallel MASS nloptr numDeriv Rcpp testthat]; }; kernDeepStackNet = derive2 { name="kernDeepStackNet"; version="2.0.2"; sha256="04bdggxvggmppp289n2zw6ijdm7y05gws6z7bp6fr8n1zsxy2w3c"; depends=[caret DiceKriging DiceOptim GA GenSA glmnet globalOptTests lhs matrixStats mvtnorm Rcpp RcppEigen]; }; kerndwd = derive2 { name="kerndwd"; version="2.0.2"; sha256="0nf5hyb274gn02n4lygwryv1jaqff77i040bd8gs1xykgvy6jxny"; depends=[]; }; kernelFactory = derive2 { name="kernelFactory"; version="0.3.0"; sha256="001kw9k3ivd4drd4mwqapkkk3f4jgljiaprhg2630hmll064s89j"; depends=[AUC genalg kernlab randomForest]; }; kernelboot = derive2 { name="kernelboot"; version="0.1.5"; sha256="0m31akhya7390lbkw0cjxcrzw28njbz4smd35m93aarb2lgpcj4k"; depends=[future future_apply Rcpp]; }; - kernlab = derive2 { name="kernlab"; version="0.9-26"; sha256="0xv0slf3ggw3sswsi34416lb1g3h1pqkrr2h7r1n1kvgii3l0jcm"; depends=[]; }; + kernlab = derive2 { name="kernlab"; version="0.9-27"; sha256="1m0xqf6gyvwayz7w3c83y32ayvnlz0jicj8ijk808zq9sh7dbbgn"; depends=[]; }; kernplus = derive2 { name="kernplus"; version="0.1.1"; sha256="1dxw1qk5gx7g05kgsbh5436r7mbv77631zjs0c4ibpscaw77g475"; depends=[circular KernSmooth mixtools]; }; kernscr = derive2 { name="kernscr"; version="1.0.3"; sha256="0h3xv76dxch8kv4z7cgx60iaikk6906n75c4kc1mccpw0jvyxrvb"; depends=[MASS mvtnorm]; }; kexpmv = derive2 { name="kexpmv"; version="0.0.3"; sha256="1nx2bpyc06vlr78nhig4zaaygphjp4wqsz9jzhs4qx8wy3kh7rmy"; depends=[Rcpp SparseM]; }; keyholder = derive2 { name="keyholder"; version="0.1.2"; sha256="157k39acn8732g0ha9m402v5hhqnc34qpghvhg430dga2r5g3cxh"; depends=[dplyr rlang]; }; keyplayer = derive2 { name="keyplayer"; version="1.0.3"; sha256="0j4n46r9ivkbzqz8g22dq2bpmx7bs05yb5qp27p9jnfh5x19v2ds"; depends=[igraph matpow sna]; }; keypress = derive2 { name="keypress"; version="1.1.1"; sha256="0w8hcxxx47zyz2cbz2s8va2rfb6s2ziw9ck1slq9kh3aqsx3i9g0"; depends=[]; }; - keyring = derive2 { name="keyring"; version="1.0.0"; sha256="0asa62cgs08k0g0yhvsxr2k8rfxy3hqkd4hrv0396394v13b08w5"; depends=[assertthat getPass openssl R6]; }; + keyring = derive2 { name="keyring"; version="1.1.0"; sha256="1hpfd4hbx43i39l995rg86kfxi7wlyla1gv8mwcdr4xx7z122zzq"; depends=[assertthat filelock getPass openssl R6 rappdirs sodium yaml]; }; keyringr = derive2 { name="keyringr"; version="0.4.0"; sha256="04f0z6mqj75l5qhiab0zvjsvz3jz1bp6dfazkpgihjmls5k11dnh"; depends=[stringr]; }; kfda = derive2 { name="kfda"; version="1.0.0"; sha256="0861hzry55gj8ykdd8cwil1wb7234pkmipp4v1749fpmzggq1xgi"; depends=[kernlab MASS]; }; kfigr = derive2 { name="kfigr"; version="1.2"; sha256="0hmfh4a95883p1a63lnziw8l9f2g0fn0xzxzh36x9qd9nm7ypmkw"; depends=[knitr]; }; kgc = derive2 { name="kgc"; version="1.0.0.2"; sha256="14zbcimnglh5jj07dcaxp1dfjaz8syswy29nf8z39qmslv1hg9kk"; depends=[plyr shiny shinythemes]; }; kgschart = derive2 { name="kgschart"; version="1.3.5"; sha256="1gdsrmnv8z99cldvig7grlq8gsbv3wpx7zdamw85lz563n4ln94d"; depends=[abind deepnet ggplot2 gridExtra magrittr matrixStats nnet png shiny stringr]; }; - kidney_epi = derive2 { name="kidney.epi"; version="1.0.0"; sha256="1n264l2snbmx72hp67gzkwwzkmivi1f4nddh3zhxvy028y47w643"; depends=[]; }; + khroma = derive2 { name="khroma"; version="1.0.0"; sha256="0bws0p5gyla7vlplayqqjl7rygwk5jz3dwbk0rlz38hcafrlzh1l"; depends=[]; }; + kidney_epi = derive2 { name="kidney.epi"; version="1.1.0"; sha256="191yrqdviwvfl62c62qqfa154hglxpfwcxllhgwlm8nsysg46z5i"; depends=[]; }; kimisc = derive2 { name="kimisc"; version="0.4"; sha256="0nbjspbq9akhmamfdn192p5b6ki7xqhp422ih6v77xsnrhl5m24z"; depends=[memoise plyr pryr]; }; kin_cohort = derive2 { name="kin.cohort"; version="0.7"; sha256="0wijsjz0piz5j9rm2nr3d5dfpiyba740mbfbkmfll9pz72s58wz8"; depends=[survival]; }; kineticF = derive2 { name="kineticF"; version="1.0"; sha256="1k54zikgva9fw9c4vhkc9b0kv8sq5pmc962s8wxr6qv97liv9p46"; depends=[circular lqmm MASS plotrix sp splancs]; }; kinfit = derive2 { name="kinfit"; version="1.1.14"; sha256="0gb43pghgllb9gzh8jzzpfmc46snv02ln4g3yqsdah3cyqnck0ih"; depends=[]; }; kinship2 = derive2 { name="kinship2"; version="1.6.4"; sha256="19r3y5as83nzk922hi4fkpp86gbqxdg1bgng798g1b073bp6m9yj"; depends=[Matrix quadprog]; }; - kirby21_base = derive2 { name="kirby21.base"; version="1.6.0"; sha256="1l9ynmkh27m6c3862j7xqiydanknd1zplqvsay5amh7k13isj9gg"; depends=[git2r]; }; - kirby21_fmri = derive2 { name="kirby21.fmri"; version="1.6.0"; sha256="15dhb7d2xrka55gg4f1n74dysj74c4fv9hpdx2n1vc79n90zl6yr"; depends=[kirby21_base]; }; - kirby21_t1 = derive2 { name="kirby21.t1"; version="1.6.0"; sha256="0zanqmndm15fld31g7zpam3y3z63aw1sgk74ya2l95cn21ln34a3"; depends=[kirby21_base]; }; + kirby21_base = derive2 { name="kirby21.base"; version="1.7.0"; sha256="0drm9h1f91yb75v9jzcaysj2cijcana949xvq8bgkqklmf9zwfl5"; depends=[git2r]; }; + kirby21_fmri = derive2 { name="kirby21.fmri"; version="1.7.0"; sha256="1z2l6bn53mwkll9ki4169lqlz6wcfp29xzdrqyw606j2xrs4wc22"; depends=[kirby21_base]; }; + kirby21_t1 = derive2 { name="kirby21.t1"; version="1.7.0"; sha256="0bv8rrk9jh02h3gill1g2w246j4zv98cjchz7i2c092lvqps8szs"; depends=[kirby21_base]; }; kissmig = derive2 { name="kissmig"; version="1.0-3"; sha256="1pi1x3gdbqrhr1km1hqj15k8wyrgs697fnxgjgxga1irbn8bi482"; depends=[raster]; }; - kitagawa = derive2 { name="kitagawa"; version="2.1-0"; sha256="1ddyd0rwwmdpbq823qass5dlp2lvi9d64wpl61ik6fghms2p9ryr"; depends=[kelvin]; }; + kitagawa = derive2 { name="kitagawa"; version="2.2-2"; sha256="0hl2l42jz4wkcx94cqycw8zb3ffg72fp2f310sh5icrcnyw43bmp"; depends=[kelvin]; }; kknn = derive2 { name="kknn"; version="1.3.1"; sha256="1nzkg3dxaiqp87p56wm895qx5xn86hv5hjr73qvl1yiaxiq0x112"; depends=[igraph Matrix]; }; klaR = derive2 { name="klaR"; version="0.6-14"; sha256="1g995df6286sd64nw7q9bihzkqhrasks45n8xk678y57kcadksai"; depends=[combinat MASS questionr]; }; klausuR = derive2 { name="klausuR"; version="0.12-10"; sha256="12fjs4dnwaki8sz718xgsg8qrqhsgf87cs0bylf0p3f5k8hrmk4b"; depends=[polycor psychometric xtable]; }; @@ -7835,7 +8178,7 @@ in with self; { km_ci = derive2 { name="km.ci"; version="0.5-2"; sha256="1l6kw8jppaa1802yc5pbfwwgac56nhwc9p076ivylhms4w7cdf8v"; depends=[survival]; }; kmconfband = derive2 { name="kmconfband"; version="0.1"; sha256="10n5w8k57faqcclwshs4m66i2i5b70i6f3xq5nqlgsi2ldkysbc9"; depends=[survival]; }; kmcudaR = derive2 { name="kmcudaR"; version="1.0.0"; sha256="1adixf4nsgnk8rgvcv37aznh8gxrfwn19ihh3c6siss51hlmhln2"; depends=[Rcpp RcppEigen]; }; - kmed = derive2 { name="kmed"; version="0.0.1"; sha256="0vcks4n0dpfd5cl5b8mhvhw6r2f3y12jn3d3j3dkj2grxmb9lh4c"; depends=[ggplot2]; }; + kmed = derive2 { name="kmed"; version="0.1.0"; sha256="1sqcrl75hjxpvaz1m40h7z3xzxkda8mnmq90jd6igvpbznixq2yc"; depends=[ggplot2]; }; kmer = derive2 { name="kmer"; version="1.1.0"; sha256="0c96rz75qggqfb0zccn0v92jx9ws2nlw8pk6j5jghllcgm99qbdc"; depends=[openssl phylogram Rcpp]; }; kmi = derive2 { name="kmi"; version="0.5.4"; sha256="07h4gn69r4zxm00alj74fd0qdyp7g9x38gpi1v7yzy806wlg93fr"; depends=[mitools survival]; }; kml = derive2 { name="kml"; version="2.4.1"; sha256="1my9gcripiqc6iphycjr3srj8qxy05yvd0648vblygrx2qym5hy2"; depends=[clv longitudinalData]; }; @@ -7852,51 +8195,53 @@ in with self; { knnIndep = derive2 { name="knnIndep"; version="2.0"; sha256="1fwkldgs2994svf3sj90pwsfx6r22cwwa22b30hdmd24l8v9kzn7"; depends=[]; }; knncat = derive2 { name="knncat"; version="1.2.2"; sha256="1d392910y3yy46j8my1a7m0xkij2rc6vwq5fg22qk00vqli8drz2"; depends=[]; }; knnp = derive2 { name="knnp"; version="1.0.0"; sha256="038bl834zjmwdhfh5skhsjk2jqizx285g1w4y7ji9h0h03akn5nd"; depends=[doParallel foreach forecast parallelDist]; }; - knockoff = derive2 { name="knockoff"; version="0.3.0"; sha256="0irqbidp00rh07xsfyyv5d3ksa4fn9vv49rsy8ah2gb9y41iy046"; depends=[corpcor glmnet gtools Matrix Rdsdp RSpectra]; }; - knor = derive2 { name="knor"; version="0.0-5"; sha256="19wjrcmfam1ck5vbidksmy923d5p5llikjxn0v248vzfz96ia1yc"; depends=[Rcpp]; }; + knockoff = derive2 { name="knockoff"; version="0.3.2"; sha256="1ky69f3hwwgy2il097mx0z7aakxsq692g9ink8z8cb4wnrp4bk07"; depends=[corpcor glmnet gtools Matrix Rdsdp RSpectra]; }; + knor = derive2 { name="knor"; version="0.0-6"; sha256="0mri7lw6jwkksyxidyqm2xrkjh1vd6dylxd24gd18j9blf342p7d"; depends=[Rcpp]; }; knotR = derive2 { name="knotR"; version="1.0-2"; sha256="0kd1b9wibpwyaanz9ny61qgfvcg4d3rzpy05sfshlpp0b1y8d3xj"; depends=[]; }; kntnr = derive2 { name="kntnr"; version="0.4.1"; sha256="0d78mgmz2yhfbf4m5jaa28aazaw2wf9vf1vxl53wrnpy0hxw329y"; depends=[base64enc dplyr httr jsonlite lazyeval lubridate purrr rstudioapi stringr tibble]; }; - koRpus = derive2 { name="koRpus"; version="0.10-2"; sha256="1ykaky10zkj76w44fhk6kb6dqz1pgncmdnz4r2amcm08a8h96gsr"; depends=[data_table]; }; + koRpus = derive2 { name="koRpus"; version="0.11-5"; sha256="053882fnz6c7yjiz72jg6sawd9q57h110nd4yjay65piadi9mci5"; depends=[data_table sylly]; }; koRpus_lang_en = derive2 { name="koRpus.lang.en"; version="0.1-2"; sha256="0v3cjzcpa24n479xi2lkj3yhjrgbd14iq9rz1bvywbj3shixs0bn"; depends=[koRpus sylly_en]; }; - kofdata = derive2 { name="kofdata"; version="0.1.3.1"; sha256="1sys4ymh0ja2zb14k6hq455563np7n8jzmgakkjdghfi38lxndam"; depends=[httr jsonlite xts zoo]; }; + kofdata = derive2 { name="kofdata"; version="0.1.3.2"; sha256="0s7y1djmiz598bx0ppabb5pc1cssaavr67yf4zk9aai90xs2p2v1"; depends=[httr jsonlite xts zoo]; }; kofnGA = derive2 { name="kofnGA"; version="1.2"; sha256="1j4gx6pkmasgbgcdlg6i5nzfrmim61c2hw34k5zfmwfbkrsgb575"; depends=[]; }; - kohonen = derive2 { name="kohonen"; version="3.0.5"; sha256="110ckinwzgv8b6g1cj0k0vva19abi44psf9vmqifs3450v90bq8z"; depends=[MASS Rcpp]; }; + kohonen = derive2 { name="kohonen"; version="3.0.6"; sha256="0b1039j69v43ppyczwpagriiv669gnxh3s40dhjq0mb3a6fxrpcb"; depends=[MASS Rcpp]; }; kokudosuuchi = derive2 { name="kokudosuuchi"; version="0.4.2"; sha256="1nwydfyr9waa5h8h8nrmwxy0jx7i4893g5khfv6b4g09z6g5cyly"; depends=[curl dplyr glue httr purrr rlang sf shiny stringr tibble xml2]; }; kolmim = derive2 { name="kolmim"; version="1.0"; sha256="0g1i0cazi4nhfwdd3ywqrar1sn7bw77w38qjii045w5vqg05srkp"; depends=[]; }; komadown = derive2 { name="komadown"; version="0.2.0"; sha256="0mw1bcrg10yy1y844lpik70979420h0nsar48v5p3qk783pymbdp"; depends=[bookdown rmarkdown]; }; - komaletter = derive2 { name="komaletter"; version="0.2.0"; sha256="17xkc22ci2gqypcfs1yhyzfmpsh8bmjbw6yms27cbqg4m4jdgm9v"; depends=[rmarkdown]; }; + komaletter = derive2 { name="komaletter"; version="0.3.0"; sha256="09yvb8ijm1s5d89mrl8j56n8x8q1lq2siprw8191ys3jidmk6ha7"; depends=[rmarkdown]; }; konfound = derive2 { name="konfound"; version="0.1.0"; sha256="1w85gsms061d5hik3bc7x5gc7cp6c9h8l8q8q60isj1r0n60a81s"; depends=[broom dplyr ggplot2 margins pbkrtest purrr rlang tidyr]; }; kpcalg = derive2 { name="kpcalg"; version="1.0.1"; sha256="1gd5bisyfwb12l9jmwhi2arlxrabc01vgv4m1qqs23vybsd6yh52"; depends=[energy graph kernlab mgcv pcalg RSpectra]; }; kpeaks = derive2 { name="kpeaks"; version="0.1.0"; sha256="1qxpncwyshv35h1190py6a69mljabfcjjs7v17a2rb5asahy3rk8"; depends=[]; }; kpmt = derive2 { name="kpmt"; version="0.1.0"; sha256="15d26khc0v3kc1c7l1avqp48pfqmc6xj32029mv7myivr41ashk3"; depends=[matrixStats]; }; kpodclustr = derive2 { name="kpodclustr"; version="1.0"; sha256="1fywgdj4q3kg8y9lwnj6vxg9cwgs5ccwj6m3knfgg92f8ghnsbsw"; depends=[clues]; }; kriens = derive2 { name="kriens"; version="0.1"; sha256="1qi65k9fsbbkbw0w40rv60p5ygrvr10rmlyxdaqa5bdpcmrbly5z"; depends=[]; }; + krige = derive2 { name="krige"; version="0.1-1"; sha256="0r52i29k5835r99vip1b0xxsqdg71m7zlbgq5002iav1ig6l7k71"; depends=[MASS mvtnorm]; }; kriging = derive2 { name="kriging"; version="1.1"; sha256="04bxr34grf2nlrwvgrlh84pz7yi0r8y7dc2wk0v5h5z6yf5a085w"; depends=[]; }; - krm = derive2 { name="krm"; version="2018.1-24"; sha256="0qysv61vjdz8674hn6mk0913dkm2bfkqmr7cybls9z9h4i068vdk"; depends=[kyotil]; }; - ks = derive2 { name="ks"; version="1.11.2"; sha256="0q99b6jv61cni5fgxvygbg8hs4fyhdmbgdzwgny7mrp1jr84izcx"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv multicool mvtnorm]; }; + krm = derive2 { name="krm"; version="2018.8-17"; sha256="0d4isfzhlz9kxq0sbb1m60wnvcnlqzz8d45hiikgf1dfbngkyh2a"; depends=[kyotil]; }; + ks = derive2 { name="ks"; version="1.11.3"; sha256="0z749c3xzpf6n0g7xcfplrhap1di8k7kcfr7vigh95ywnigyhs8d"; depends=[FNN kernlab KernSmooth Matrix mclust mgcv multicool mvtnorm]; }; kscons = derive2 { name="kscons"; version="0.7.0"; sha256="1i4dp56y9swl5s6cipqlm5i5fknz2v0yz5g930cl5i8kx91rxwrp"; depends=[]; }; kselection = derive2 { name="kselection"; version="0.2.0"; sha256="1arg96r2pldvb89rfqnfpjxwksyac2mhmbimbkwzm7wrnbnrcn5d"; depends=[]; }; ksrlive = derive2 { name="ksrlive"; version="1.0"; sha256="1zd3ggzgjks0jay69s5m7ihbd7v7zha6ssj2m9ahnyp00ghpk83j"; depends=[tightClust]; }; - kst = derive2 { name="kst"; version="0.4-0"; sha256="1vqkriqhzdzs3kldjqgl15sm25lbfqzisglk2r96rjgxbj8k59w7"; depends=[proxy relations sets]; }; - kstIO = derive2 { name="kstIO"; version="0.1-0"; sha256="04s8lyg7622zcq947qlx5brwf1an7icg94i5di8vwjp7d8zgczq6"; depends=[MASS pks sets stringr]; }; + kst = derive2 { name="kst"; version="0.5-0"; sha256="05vq23j9q4q1nh9s92z303pwma0mh0b7h64aha3xvilfs3sbhvwq"; depends=[proxy relations sets]; }; + kstIO = derive2 { name="kstIO"; version="0.2-0"; sha256="01p6krb945m5jy57k479szic4yb7bap020mz1imlnsnmbnrycpx6"; depends=[MASS pks sets stringr]; }; + kstMatrix = derive2 { name="kstMatrix"; version="0.1-0"; sha256="0c8nb6cc4ng6gc21bhnj8in7rcjnsbncb3c8k70q3w340apwv2pm"; depends=[]; }; ktsolve = derive2 { name="ktsolve"; version="1.1"; sha256="0b5myr093v3qaj9gzbw1w728i5ij418whxxpicj51w657dcy647k"; depends=[]; }; ktspair = derive2 { name="ktspair"; version="1.0"; sha256="1v63982jidxlcf2syahcb29myv34kc790l7lwyfxx9l50ssb812n"; depends=[Biobase]; }; kulife = derive2 { name="kulife"; version="0.1-14"; sha256="070ayy6fr9nsncjjljikn2i5sp2cx3xjjqyc64y2992yx74jgvvd"; depends=[]; }; kutils = derive2 { name="kutils"; version="1.45"; sha256="0qx40d5nk8q0kv09l73bcn7dbch89b9zi8yp75v39vcy4qxdnc2b"; depends=[foreign lavaan openxlsx plyr RUnit xtable]; }; kvh = derive2 { name="kvh"; version="1.3"; sha256="0dhdvka7sdh7qcq5cz5xsv8dbxr1lr4n7wf033smsz4nvwgjixr3"; depends=[Rcpp]; }; kwb_hantush = derive2 { name="kwb.hantush"; version="0.2.1"; sha256="0rjnhhzvjhhl0r2ixz9vkgnqkrnnk772253zy7xkpadj7ws69jsf"; depends=[hydroGOF lattice]; }; - kyotil = derive2 { name="kyotil"; version="2017.12-27"; sha256="0xd64xg3nj0pj0ziycq4ndpl8kwxfng96ag8zmqzzxk85zw2vyq3"; depends=[]; }; - kza = derive2 { name="kza"; version="4.0.0"; sha256="0yfn6ijbskdkcgbgk4fwhgiiy34cw9k9vy1psi779mqd9kyjf56j"; depends=[]; }; + kyotil = derive2 { name="kyotil"; version="2018.10-17"; sha256="12rrr7ynjwhcskjkfkv11q5xpdfn9j27vmnsd0r0vc2w2b25217k"; depends=[]; }; + kza = derive2 { name="kza"; version="4.1.0"; sha256="128r4xmqxy1i1svcmv8786qqmriyqygd8d49cp53x8gb56k011xa"; depends=[]; }; kzfs = derive2 { name="kzfs"; version="1.5.0.1"; sha256="0gd945x1ppdw15iqcn5ijzmh07hs7zg8rjb85231bcqbh98djvfm"; depends=[digest kzft]; }; kzft = derive2 { name="kzft"; version="0.17"; sha256="1y6almhs1x21cr4bbf5fj3mnhp65ivzs869660cyg70sva853sv7"; depends=[polynom]; }; kzs = derive2 { name="kzs"; version="1.4"; sha256="1srffwfg0ps8zx0c6hs2rc2y2p01qjl5g1ypqsbhq88vkcppx1w9"; depends=[lattice]; }; l0ara = derive2 { name="l0ara"; version="0.1.5"; sha256="15qajzpvqnikg9k199cqvwp9qbrxx4zr9lsvyad96pa9qr156gvb"; depends=[Rcpp RcppArmadillo]; }; l1kdeconv = derive2 { name="l1kdeconv"; version="1.2.0"; sha256="1mk92sz9nsmxsn7yplhfcz07k022lrr61114ckrmm0x8hfd89zj8"; depends=[ggplot2 mixtools]; }; l2boost = derive2 { name="l2boost"; version="1.0.1"; sha256="0f2gapzpvjnr8n1jgn60jpmcas4s8nk2q8q4k5v4ypwvpfqp7kk1"; depends=[MASS]; }; - laGP = derive2 { name="laGP"; version="1.5-1"; sha256="0sqzvz78p50afp892p7ghy4fmy9p3a2ik51bzzwrx6r96ax7w971"; depends=[tgp]; }; + laGP = derive2 { name="laGP"; version="1.5-2"; sha256="1gpvp07m3ixhsvvcx0px9wx2f603zbsj4cqrx8w1azwrms5y2qj4"; depends=[tgp]; }; labdsv = derive2 { name="labdsv"; version="1.8-0"; sha256="0rbf7cswnj534jdi5hfaai12nbxj6l96f02c73ynraqvdqxb1bnz"; depends=[cluster MASS mgcv]; }; label_switching = derive2 { name="label.switching"; version="1.7"; sha256="1p4cgqf79zppvzrhh5gcxnm7f8qj03fzfmjx43mjhsr1vqig4c78"; depends=[combinat lpSolve]; }; - labelVector = derive2 { name="labelVector"; version="0.0.1"; sha256="0iwk8p3m2g6732q2pilwr3wlaiys15khd54r0vxsp2irlw77lzrg"; depends=[]; }; + labelVector = derive2 { name="labelVector"; version="0.1.0"; sha256="08ydgmvks09hbln10zmqxv9hxgiha0n9w5cgych9bnkqdca74gah"; depends=[]; }; labeledLoop = derive2 { name="labeledLoop"; version="0.1"; sha256="0gq392h0sab8k7k8bzx6m7z5xpdsflldhwbpdf92zbmkbzxsz00m"; depends=[]; }; labeling = derive2 { name="labeling"; version="0.3"; sha256="13sk7zrrrzry6ky1bp8mmnzcl9jhvkig8j4id9nny7z993mnk00d"; depends=[]; }; labelled = derive2 { name="labelled"; version="1.1.0"; sha256="0w1zc4w2lkhyldwqyc0drfdn251kjz94jv9p0sn6b034vcifq7ia"; depends=[dplyr haven]; }; @@ -7906,23 +8251,25 @@ in with self; { lacm = derive2 { name="lacm"; version="0.0.3"; sha256="0qhvffiw2bcpnv6l4y4h12ss59yc2j0hwsg2nr4a7w4nh6yk9fwc"; depends=[numDeriv statmod]; }; laeken = derive2 { name="laeken"; version="0.4.6"; sha256="1rhkv1kk508pwln1d325iq4fink2ncssps0ypxi52j9d7wk78la6"; depends=[boot MASS]; }; laercio = derive2 { name="laercio"; version="1.0-1"; sha256="0la6fxv5k9zq4pyn8dxjiayx3vs9ksm9c6qg4mnyr9vs12z53imm"; depends=[]; }; - lagged = derive2 { name="lagged"; version="0.1-1"; sha256="062a9hrnp2bsahsdasml0wzqpapyslfiwy9q2mvwqsl6j2pqkk0s"; depends=[]; }; + lagged = derive2 { name="lagged"; version="0.2-0"; sha256="053wv4z1859v4j00x6l707v6w5zdyk3r1a6naxs601607yn27n5h"; depends=[]; }; lagsarlmtree = derive2 { name="lagsarlmtree"; version="1.0-0"; sha256="0nrrr2n2q228d1c7qrhcnczmr374i56p7kr868yl19g8ddd3gx3w"; depends=[Formula partykit spdep]; }; lakemorpho = derive2 { name="lakemorpho"; version="1.1.1"; sha256="0asrp9rvyi5ykxw922qx25rgxvyc9mh4sc7qkbpwzqw8xvgpad2z"; depends=[cluster geosphere raster rgdal rgeos sp]; }; laketemps = derive2 { name="laketemps"; version="0.5.1"; sha256="04742r379bzgbfr4243wwkb26cvfmnw50jzgygq7vblq00grzska"; depends=[dplyr reshape2]; }; lamW = derive2 { name="lamW"; version="1.3.0"; sha256="00qa1sxyqb2r7f9yidg43cq2v1285f45xpm3z928jpi424mpg0fc"; depends=[Rcpp RcppParallel]; }; lambda_r = derive2 { name="lambda.r"; version="1.2.3"; sha256="0cc6pszs6yccn0hgjpyn9gspv9aiva9d91ba0640i5m0l5xy7n0c"; depends=[formatR]; }; lambda_tools = derive2 { name="lambda.tools"; version="1.0.9"; sha256="1wslxxh6rxny3n06y16dqwpczi3k42vrq4pbwwshl6kzhl56r45b"; depends=[lambda_r]; }; + lamme = derive2 { name="lamme"; version="0.0.1"; sha256="1x9jl79iqikpjixajly1k8w2nkzskns2m0v242giknl0ikw298h1"; depends=[]; }; landest = derive2 { name="landest"; version="1.0"; sha256="1lp5sfqk0n7i23fmwjgzsabml1fsji1h9xq5khxzaz1bzqv1s08g"; depends=[survival]; }; landpred = derive2 { name="landpred"; version="1.0"; sha256="1bl17xkx18i8i7arccnjmxvhjn4yiy7w64hg4n0xmhk8pg0l3mrg"; depends=[survival]; }; landsat = derive2 { name="landsat"; version="1.0.8"; sha256="07zvj1yyryxk7rwgcrf1kl32p2karkkqz6xrnwy1096dg9iw2js7"; depends=[lmodel2 mgcv rgdal sp]; }; landsat8 = derive2 { name="landsat8"; version="0.1-10"; sha256="169b5ka98ka9chbmksz6syaygc9wgl8i2gz1h2xkxj3lk9jcg01r"; depends=[rgdal sp]; }; landscapeR = derive2 { name="landscapeR"; version="1.2"; sha256="1zm5mj861ycbc2m28yjqnkifx8grc4l718mf8r422m78jfakvcjy"; depends=[raster Rcpp]; }; - landscapetools = derive2 { name="landscapetools"; version="0.3.0"; sha256="0ssrqcac3x8fca0vx63nzzac38kx8vlbffkzahmag24c6b1y6dzq"; depends=[checkmate dplyr extrafont ggplot2 magrittr purrr raster rasterVis tibble tidyr viridis]; }; + landscapemetrics = derive2 { name="landscapemetrics"; version="0.2"; sha256="1blriglh2kplcndcrgyxw6llhffxy2lbra8brpji6ma7552nb4xl"; depends=[dplyr ggplot2 raster Rcpp RcppArmadillo sp tibble]; }; + landscapetools = derive2 { name="landscapetools"; version="0.4.0"; sha256="191fgb0in2vz8drfm59g5cddka1yxi4l37zpiprj9ay1hdg8rc0s"; depends=[checkmate dplyr extrafont ggplot2 magrittr purrr raster rasterVis tibble tidyr viridis]; }; landsepi = derive2 { name="landsepi"; version="0.0.4"; sha256="0b162vdgrd1v93bm5dc5r4nzpcm3cq5iy8v3f2axpx1fk378aaar"; depends=[fields maptools MASS Matrix Rcpp rgdal rgeos sf sp splancs]; }; languageR = derive2 { name="languageR"; version="1.4.1"; sha256="0grkhdjz9dcrgq6qwv7wpwmckn3mfv022c5wrx29b1dxafd0qzm0"; depends=[]; }; languagelayeR = derive2 { name="languagelayeR"; version="1.2.3"; sha256="1sh3k8xw88pm93wmpy1qi44i8pv5b5g6ajzas36bdi1bqm8cqzax"; depends=[attempt curl httr rjson]; }; - languageserver = derive2 { name="languageserver"; version="0.2.3"; sha256="1rjdmnfgf6nj03ddsak56y6gii8kj2vayri2l26hg1n0ap99z1bs"; depends=[callr jsonlite lintr R6 repr stringr styler]; }; + languageserver = derive2 { name="languageserver"; version="0.2.5"; sha256="07j0s5s689szasvh4h5hn2250yfly35gjv88g7ggzy71i9vw0cdv"; depends=[callr collections desc jsonlite lintr R6 repr stringr styler]; }; lans2r = derive2 { name="lans2r"; version="1.0.5"; sha256="1m3hz85gl9m4vafdy7mj3z560d11mdwlwvnzy8n7d1cjqryn7a2b"; depends=[dplyr ggplot2 lazyeval R_matlab reshape2 tidyr]; }; lar = derive2 { name="lar"; version="0.1-2"; sha256="0qda0y4ag10kg83wxs3z754kc8c1dg2rwciy64klk7an4ln43i5b"; depends=[data_table treemap xlsx]; }; largeList = derive2 { name="largeList"; version="0.3.1"; sha256="0csijzlxajj0rh24w5n7fs6ss301zr6zfv5khyq4a9g437bwhc2i"; depends=[]; }; @@ -7932,31 +8279,32 @@ in with self; { lassoscore = derive2 { name="lassoscore"; version="0.6"; sha256="1i3i07da8sw9w47rcflhylz8zxvzkyycbc1a4gf6hbcpp21rqd7d"; depends=[glasso glmnet Matrix]; }; lassoshooting = derive2 { name="lassoshooting"; version="0.1.5-1"; sha256="0ixjw8akplcfbzwyry9p4bhbcm128yghz2bjf9yr8np6qrn5ym22"; depends=[]; }; latdiag = derive2 { name="latdiag"; version="0.2-4"; sha256="051chvky3hlfr4hwm9qickl6aaxwnxa88zksmzczqfspby771hq6"; depends=[]; }; - latentnet = derive2 { name="latentnet"; version="2.8.0"; sha256="05r7hzj5i7rgpxl798lwi2m62l1qkl5zdza0q2awcd5ydkgj34hp"; depends=[abind coda ergm MASS mvtnorm network sna statnet_common]; }; - later = derive2 { name="later"; version="0.7.3"; sha256="04j2phymxgkk4hv9pfa5w3s98w5d7fvm11blrdhxmray4n618msw"; depends=[BH Rcpp rlang]; }; + latentnet = derive2 { name="latentnet"; version="2.9.0"; sha256="0gmv4h6zijhgypkasr1y45lx7ksfhfpdgrqqxan4qnxfqp3kxbrr"; depends=[abind coda ergm MASS mvtnorm network sna statnet_common]; }; + later = derive2 { name="later"; version="0.7.5"; sha256="0xhwn37makzm85zb6w5acc7svzibxcnz69rks0kxw22vapkxwz1i"; depends=[BH Rcpp rlang]; }; latex2exp = derive2 { name="latex2exp"; version="0.4.0"; sha256="12nbcgfmv13k6sc6m326ras9bcvy380b7rxcxphn06r3cfkby0zw"; depends=[magrittr stringr]; }; - latexpdf = derive2 { name="latexpdf"; version="0.1.3"; sha256="1zsdz3nvhifxbhp69nigq1crgm39g6gmc8xl5akp5jdidmzyrh84"; depends=[]; }; + latexpdf = derive2 { name="latexpdf"; version="0.1.6"; sha256="07g33z5lyxinlrzpk6pd41m4c4bbfql611yqcqxasf8wra9bb0jr"; depends=[]; }; lattice = derive2 { name="lattice"; version="0.20-35"; sha256="0pcnmaz3lr62ly0dcy5hnnqxshc4yqd43hrvlz3almgc9l7sna88"; depends=[]; }; - latticeDensity = derive2 { name="latticeDensity"; version="1.0.7"; sha256="1y33p8hfmpzn8zl4a6zxg1q3zx912nhqlilca6kl5q156zi0sv3d"; depends=[spam spatstat spdep splancs]; }; + latticeDensity = derive2 { name="latticeDensity"; version="1.1.0"; sha256="0amxkdf240pgqaydkfvmv1mgsl17jv57938sl96clw1bzd4ilnld"; depends=[sp spam spatstat spdep splancs]; }; latticeExtra = derive2 { name="latticeExtra"; version="0.6-28"; sha256="1hkyqsa7klk5glj9y1hg3rxr5qilqw8h0017zc4c3nps7lr9a1kq"; depends=[lattice RColorBrewer]; }; - lava = derive2 { name="lava"; version="1.6.2"; sha256="1r47pps39cgvxhg1s0bqknf4jl91pbb0c76q5icxivhwb172fqcm"; depends=[numDeriv SQUAREM survival]; }; + lava = derive2 { name="lava"; version="1.6.3"; sha256="0cayjspry3r2lcbvl77v5v52b2zarri3b8xsf87pw5a3jn9anxcf"; depends=[numDeriv SQUAREM survival]; }; lava_tobit = derive2 { name="lava.tobit"; version="0.5"; sha256="15dlcjgnvrpdxymcwf4rvk72ssr650dy1ayp50zlrp2va0p6h4kw"; depends=[lava mets mvtnorm survival]; }; - lavaSearch2 = derive2 { name="lavaSearch2"; version="1.3.3"; sha256="08h9nfbjbq6l5drmq07js2b6ylv29wfrddqdlpsnysi99sj8i8aq"; depends=[ggplot2 lava MASS Matrix multcomp mvtnorm nlme reshape2 sandwich]; }; - lavaan = derive2 { name="lavaan"; version="0.6-1"; sha256="0k0mm66i5xfb06rc7b6is16nn7k2limas5mhlr9d5nwbqz87g4i2"; depends=[MASS mnormt numDeriv pbivnorm]; }; + lavaSearch2 = derive2 { name="lavaSearch2"; version="1.4"; sha256="0mr3vranmsrd9acr16gryib89dn2x19wwwd4wx3dgwwby18mc5j3"; depends=[doParallel ggplot2 lava MASS Matrix multcomp mvtnorm nlme reshape2 sandwich]; }; + lavaan = derive2 { name="lavaan"; version="0.6-3"; sha256="0hw856kv11zqn6nd4216rh19i6xbnc1rh044r7jvvxkhzgbqkyxz"; depends=[MASS mnormt numDeriv pbivnorm]; }; lavaan_shiny = derive2 { name="lavaan.shiny"; version="1.2"; sha256="0qgswdpxb5af0l3v70sg0jrgsdwr88gz6zzwbk3pw5x6qnvnwb6r"; depends=[lavaan psych semPlot shiny shinyAce]; }; lavaan_survey = derive2 { name="lavaan.survey"; version="1.1.3.1"; sha256="133hpy8s00y6jzwwzl9brdh70w26jycdm3n1c6bcryghwh3ai4xr"; depends=[lavaan MASS survey]; }; lavaanPlot = derive2 { name="lavaanPlot"; version="0.5.1"; sha256="01bx1snd3zhc8dmq0f407qhw2d00f6d38qpr791qc1mq5kr3d8qj"; depends=[DiagrammeR lavaan stringr]; }; lawn = derive2 { name="lawn"; version="0.4.2"; sha256="17nj88n5xzhjkwm0hi8g9h5a3nclvkq3k1pv3690ph14g4l9lgcj"; depends=[jsonlite magrittr V8]; }; lawstat = derive2 { name="lawstat"; version="3.2"; sha256="03ppzyx3x6vx1n2k5l8gl9j2q2mnqa1im5smxnrlncan7yzjy7sf"; depends=[Kendall mvtnorm VGAM]; }; - lazy = derive2 { name="lazy"; version="1.2-15"; sha256="1pdqgvn0qpfg5hcg5159ccf5qj2nd1ibai9p85rwjpddfynk6jks"; depends=[]; }; + lazy = derive2 { name="lazy"; version="1.2-16"; sha256="1psh3sng1pm23pjwy7iszb21ys7d29ry34ymvpgxj6zdhywwi5n7"; depends=[]; }; lazyData = derive2 { name="lazyData"; version="1.1.0"; sha256="0mbmmx6dh8ph4lrx1b4gxbwz3jwxv4nqi0xvfzpzrm3bwbsjc634"; depends=[]; }; lazyWeave = derive2 { name="lazyWeave"; version="3.0.2"; sha256="1a7l0rgkp3xq2s6bikciq778fwyr282baa6jk9ip4a71s931p2ag"; depends=[Hmisc labelVector]; }; lazyeval = derive2 { name="lazyeval"; version="0.2.1"; sha256="0q9zx78ncy2ffzrf9sh053069kd3w1xn1ss3gsbyf3y4jhza9cw3"; depends=[]; }; - lazyrmd = derive2 { name="lazyrmd"; version="0.2.0"; sha256="0ahm1wspvm625lx7y2zz05bvv66rlswphs84vpkcqb0dqfcn3s48"; depends=[digest htmltools htmlwidgets knitr rmarkdown]; }; + lazyrmd = derive2 { name="lazyrmd"; version="0.2.0.1"; sha256="0yzamy1bfq0d7mnrr24wzvvw6lq7rhfs6qnqypfmym65j5kfj0f8"; depends=[digest htmltools htmlwidgets knitr rmarkdown]; }; lazysql = derive2 { name="lazysql"; version="0.1.3"; sha256="18vff80rl8ckjwfqi9dhzs1q35a1wrxvynidji6dy2kvvk38xnpa"; depends=[checkmate magrittr plyr]; }; lba = derive2 { name="lba"; version="2.4.4"; sha256="0izqndm992zv3sg8v5lpnxbdbxhpxl6hq3bf6xgq3pnw8vl3f6nb"; depends=[alabama MASS plotrix rgl scatterplot3d]; }; lbfgs = derive2 { name="lbfgs"; version="1.2.1"; sha256="0p99g4f3f63vhsw0s1m0y241is9lfqma86p26pvja1szlapz3jf5"; depends=[Rcpp]; }; lbfgsb3 = derive2 { name="lbfgsb3"; version="2015-2.13"; sha256="1jpy0j52w8kc8qnwcavjp3smvdwm1qgmswa9jyljpf72ln237vqw"; depends=[numDeriv]; }; + lbfgsb3c = derive2 { name="lbfgsb3c"; version="2018-2.13"; sha256="01pdzh1wfj5xpxl08c13rrf2iyf616s2fav7pznlgha7bpkdc2j4"; depends=[numDeriv Rcpp RcppArmadillo]; }; lbiassurv = derive2 { name="lbiassurv"; version="1.1"; sha256="1i6l3y4rasqpqka7j39qjx22wjbilgc9pkp05an52aysfvfxy193"; depends=[actuar]; }; lbreg = derive2 { name="lbreg"; version="1.2"; sha256="0wcw5w07fgmxwzmamf380l8vxw9fnxhbrhcwwfy6x87xby3bzr1b"; depends=[MASS]; }; lcda = derive2 { name="lcda"; version="0.3"; sha256="1ximsyn6qw2gfn7b1hdpbjs6h6nk7hrignlii0np1lbf0k8l4xxl"; depends=[poLCA]; }; @@ -7970,44 +8318,48 @@ in with self; { ldat = derive2 { name="ldat"; version="0.2.0"; sha256="04l544js7xzaywd2mj3kcz40gxn98primzmzd1ihk35lqmpd7h8y"; depends=[BH lvec Rcpp]; }; ldatuning = derive2 { name="ldatuning"; version="0.2.0"; sha256="18nm4hj7733c1cp03hyddnivhiiyv7ndnw9m6j3af019jjmvf215"; depends=[ggplot2 reshape2 Rmpfr scales slam topicmodels]; }; ldbod = derive2 { name="ldbod"; version="0.1.2"; sha256="1ylzkswnhf4jnjx2ijasy49pj78ffx333za0bx2fnf3g85kicqiv"; depends=[mnormt RANN]; }; - ldbounds = derive2 { name="ldbounds"; version="1.1-1"; sha256="15ixrq615x64zmi6dryq3ww0dqxd0qf5xx1bs3w934sf99l46bhs"; depends=[lattice]; }; + ldbounds = derive2 { name="ldbounds"; version="1.1-1.1"; sha256="10rmkidvvhwnrkc62c5ld44xhbvx1k8mch28h1yryakn8gznp3p8"; depends=[lattice]; }; ldhmm = derive2 { name="ldhmm"; version="0.4.5"; sha256="1pax1hl0h07nc9d34pf0jqgpcxr7y7dpqcm2hlclrmsinhj9q8vi"; depends=[ecd ggplot2 moments optimx scales xts zoo]; }; ldr = derive2 { name="ldr"; version="1.3.3"; sha256="1c48qm388zlya186qmsbxxdcg1mdv3nc3i96lqb40yhcx2yshbip"; depends=[GrassmannOptim Matrix]; }; leabRa = derive2 { name="leabRa"; version="0.1.0"; sha256="08yiwyfg9bp4i9w5yyw9p63wyvgj39kd64y3h21j2jmpw8zxncdq"; depends=[plyr R6]; }; leaderCluster = derive2 { name="leaderCluster"; version="1.2"; sha256="1lqhckarqffm2l3ynji53a4hrfn0x7zab7znddia76r2h6nr02zb"; depends=[]; }; leafSTAR = derive2 { name="leafSTAR"; version="1.0"; sha256="16zfaj0v6dx6mhy6m126lxa6w0dzfw4acm83jlbrizaz52amhv6a"; depends=[]; }; - leaflet = derive2 { name="leaflet"; version="2.0.1"; sha256="01ngvwj2w0hlxz24x32ffwkcd5rrbm1w57mp7mlaapi3yfnxaxlq"; depends=[base64enc crosstalk htmltools htmlwidgets magrittr markdown png raster RColorBrewer scales sp viridis]; }; + leaflet = derive2 { name="leaflet"; version="2.0.2"; sha256="051i5qmwa0zbk4jpjrx9kzk4g8qg9c3cavvhw19yj08fjhh8si7s"; depends=[base64enc crosstalk htmltools htmlwidgets magrittr markdown png raster RColorBrewer scales sp viridis]; }; leaflet_esri = derive2 { name="leaflet.esri"; version="1.0.0"; sha256="01bwzxh2rdhpvvazaxsji8axl765q1ix1fdxla6i61nvqkpw3dz1"; depends=[htmltools leaflet leaflet_extras]; }; leaflet_extras = derive2 { name="leaflet.extras"; version="1.0.0"; sha256="0li7651cwlz7sg04xdrmvhkrf0n6amaydck7gqz0wkb6wq8hcyzw"; depends=[htmltools htmlwidgets leaflet magrittr stringr]; }; leaflet_minicharts = derive2 { name="leaflet.minicharts"; version="0.5.4"; sha256="17lrchpry3in36jdkinsxs9lzqnx65xyk9g939knc8nmjw6z2j2r"; depends=[htmltools leaflet]; }; leafletCN = derive2 { name="leafletCN"; version="0.2.1"; sha256="1rg39n4bjacwss9nbdnz8y2zh8hxlc7a5ygndhjbmzajnbxfh09b"; depends=[htmltools jsonlite leaflet magrittr rgeos sp]; }; leafletR = derive2 { name="leafletR"; version="0.4-0"; sha256="0j1i971dl3smq8rcsa5s4rfmmk936k2q6xa4hppfzwhrxs3xkkkx"; depends=[brew jsonlite]; }; + leanpubr = derive2 { name="leanpubr"; version="0.3.1"; sha256="0c8pmzn25cwv0wccf30zrrqrs5amlk8iqyyva9vp9976wzwgbxrx"; depends=[httr jsonlite xml2]; }; leapp = derive2 { name="leapp"; version="1.2"; sha256="1yiqzmhgl5f3zwpcc5sz3yqrvp8p6r4w2ffdfyirirayqc96ar17"; depends=[corpcor MASS sva]; }; leaps = derive2 { name="leaps"; version="3.0"; sha256="11gjmn1azrjw5xlvdb4gknj9985kck9x8zb9np1rnk2smp6pka2m"; depends=[]; }; learNN = derive2 { name="learNN"; version="0.2.0"; sha256="0q0j25vi7hrwaf38y10m24czf3rsvj937jvkz3ns12bd8srlflah"; depends=[]; }; + learnPopGen = derive2 { name="learnPopGen"; version="0.9.8"; sha256="1f1wf7g3r68vd0d89cbqb3ik61h67sy40j86628yb7r0x0xk85dn"; depends=[gtools phytools]; }; learningCurve = derive2 { name="learningCurve"; version="1.1.2"; sha256="02dl5rlvwa8dvhknf4kdfg3aial54shnxrq7k2k8yj2dj0qh062c"; depends=[ggplot2 gridExtra scales tibble]; }; learningr = derive2 { name="learningr"; version="0.29"; sha256="1nr4ydcq2mskv4c0pmf0kxv5wm8pvjqmv19xz5yaq0j834b0n5q7"; depends=[plyr]; }; learnr = derive2 { name="learnr"; version="0.9.2.1"; sha256="0jbk0g6fkw7zs8ykzhsvh9vvz8xmc4v03bqzjsa5mmpxpqan5vx5"; depends=[evaluate htmltools htmlwidgets jsonlite knitr markdown rappdirs rmarkdown rprojroot shiny withr]; }; learnrbook = derive2 { name="learnrbook"; version="0.0.2"; sha256="1k17dk8ahn1ifwid1hhx0k7fpgc62zg82y66bbf6nhd4dgdbbv2p"; depends=[]; }; learnstats = derive2 { name="learnstats"; version="0.1.1"; sha256="1sa064cr7ykl4s1ssdfmb3v1sjrnkbwdh04hmwwd9b3x0llsi9vv"; depends=[ggplot2 Rcmdr shiny]; }; + ledger = derive2 { name="ledger"; version="1.0.1"; sha256="0f97wxzkhssf0z5kslsx530b4a27fdiiakiylqbfam7xzlqz34yj"; depends=[dplyr rio rlang tidyr]; }; leerSIECyL = derive2 { name="leerSIECyL"; version="1.0.2"; sha256="1zx28gpnys9mmhq7wwljfnq92wj1h1vxgqiirnfmn36z942nvmxl"; depends=[RCurl]; }; lefse = derive2 { name="lefse"; version="0.1"; sha256="1zdmjxr5xa5p3miw79mhsswsh289hgzfmn3mpj1lyzal1qgw1h5m"; depends=[ape fBasics geiger picante SDMTools vegan]; }; leiv = derive2 { name="leiv"; version="2.0-7"; sha256="15ay50886xx9k298npyksfpva8pck7fhqa40h9n3d7fzvqm5h1jp"; depends=[]; }; lemon = derive2 { name="lemon"; version="0.4.1"; sha256="16zr2xg72vxplrvsrrz2fp0akqs4am1k2ymk4mdn2yzzby41dn40"; depends=[ggplot2 gridExtra gtable knitr lattice plyr]; }; - lero_lero = derive2 { name="lero.lero"; version="0.1"; sha256="1jndsgy48fn085ilkh8dfc3w76kfnfj0x70d1m3h59zxi3x9lb82"; depends=[stringr]; }; - lessR = derive2 { name="lessR"; version="3.7.5"; sha256="1irsi3i6kih7mdkwvd42dknhgz16v7mdrdvfqsrqa85cshpl7aad"; depends=[colorspace ellipse foreign lattice latticeExtra leaps openxlsx png robustbase sas7bdat triangle]; }; + lero_lero = derive2 { name="lero.lero"; version="0.2"; sha256="03ll7jzcay0swwpmxyf0y9k2h8mxx4p5v3ggm9dgdz4j99934l70"; depends=[]; }; + lessR = derive2 { name="lessR"; version="3.7.6"; sha256="04gwdfbj5ix6zpwazl2f83x7jhdyrhhkz4s0dz1609c10m8zjpm1"; depends=[colorspace ellipse foreign lattice latticeExtra leaps openxlsx png robustbase sas7bdat triangle]; }; + lest = derive2 { name="lest"; version="1.0.0"; sha256="06ng0dpj37bhhwc34ilpks2ics97m9yjdpj4q993h3s2fn8kdgxw"; depends=[]; }; lestat = derive2 { name="lestat"; version="1.9"; sha256="1skxymdf3ncmdbskh7711xxgwsmwxfxnl52gcgw06jscx6s6wrsd"; depends=[MASS]; }; letsR = derive2 { name="letsR"; version="3.1"; sha256="0wyqqq7w21k87md3pwsz3kdaws345fdhh2xgavwiiywalg0gvxxx"; depends=[fields geosphere maps maptools raster rgdal rgeos sp XML]; }; lettercase = derive2 { name="lettercase"; version="0.13.1"; sha256="0s2s42v6a3mlz6084sk5wcbap3czgbd53f9p64pxwd1yfj18lbyx"; depends=[stringr]; }; lexRankr = derive2 { name="lexRankr"; version="0.5.0"; sha256="1l0p4qg6lcpp1f2n6mh1glvxzy3bis0c1ra8x9z5v26x31wmwq68"; depends=[igraph Rcpp SnowballC]; }; - lexicon = derive2 { name="lexicon"; version="1.0.0"; sha256="0wgf5gvmvybdsijnm4hqkigzr25p3i50y3mxp98cngrm1nqdiq7m"; depends=[data_table syuzhet]; }; + lexicon = derive2 { name="lexicon"; version="1.1.3"; sha256="085s7k1ywzmsadwmsp1gc2yspv8hp3pp3cjvpq1s39cnwpgi0h0w"; depends=[data_table syuzhet]; }; lexiconPT = derive2 { name="lexiconPT"; version="0.1.0"; sha256="0w53gnr29nzc1ib54rnxdycs0c5f7vpv586qmvxxzy4ar16kisaq"; depends=[]; }; lfactors = derive2 { name="lfactors"; version="1.0.4"; sha256="1r8qlwj3zsm233jfx9ag0q5g1knvjmbwl3785pwcd12zi6f68dcc"; depends=[]; }; lfda = derive2 { name="lfda"; version="1.1.2"; sha256="0y59iigcpmyrmsiwrpv5agja6vz3wxmxd9sl5hbf1ybm4d0lyky4"; depends=[plyr rARPACK]; }; - lfe = derive2 { name="lfe"; version="2.8"; sha256="138lnrag64hwjgcsyp9y56kq4gby5c9dqfcsl88b7j02hfly7kfv"; depends=[Formula Matrix sandwich xtable]; }; - lfl = derive2 { name="lfl"; version="1.4.1"; sha256="0r9459mmnx1khpw24w943y1x4xl3zcws2cvv61216yzb0xbqwhc0"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; }; + lfe = derive2 { name="lfe"; version="2.8-2"; sha256="1j06mnp3jii427dqbdy5hqw6f254nr5is91y24vacmxwk2m44pzd"; depends=[Formula Matrix sandwich xtable]; }; + lfl = derive2 { name="lfl"; version="1.4.2"; sha256="0lr7r04jpsrp54g4flpwihymvwa3idxhzfjxfbx4ah16rd47nk5x"; depends=[e1071 foreach forecast plyr Rcpp tseries zoo]; }; lfstat = derive2 { name="lfstat"; version="0.9.4"; sha256="0lm9fyw45kdkkjldkmagykn9p3l3jlw2ky3h00f7j6rqkizjm6r0"; depends=[dygraphs lattice latticeExtra lmom lmomRFA plyr xts zoo]; }; - lg = derive2 { name="lg"; version="0.1.0"; sha256="0gaid5aihc9dk3igbm8jhsspl1k4k3prqvn7j2vsm92jc7m00iyw"; depends=[ggplot2 ks localgauss logspline mvtnorm]; }; + lg = derive2 { name="lg"; version="0.2.0"; sha256="0127dprv1zdr9m3m84lak4998d0mjfv9809ylzhr7r8a6zy1qdv8"; depends=[ggplot2 ks localgauss logspline mvtnorm]; }; lga = derive2 { name="lga"; version="1.1-1"; sha256="1nkvar9lmdvsc3c21xmrnpn0haqk03jwvc9zfxvk5nwi4m9457lg"; depends=[boot lattice]; }; lgarch = derive2 { name="lgarch"; version="0.6-2"; sha256="05xksc4d6dbf5ls4lf2gpk9xyi99fikr7dva88b84rfgads1yhrh"; depends=[zoo]; }; lgcp = derive2 { name="lgcp"; version="1.5"; sha256="1n1f87qg0y9r22p3q1qjnfrs7xarvsidgqgg6v2bsb55viwy11g3"; depends=[fields iterators maptools Matrix ncdf4 RandomFields raster rgeos rpanel sp spatstat spatstat_utils]; }; @@ -8016,15 +8368,16 @@ in with self; { lhs = derive2 { name="lhs"; version="0.16"; sha256="09clh386i5iig8x36lx02p01zqq0kb9hzvw5slv1ggmjnp1rklcw"; depends=[]; }; libamtrack = derive2 { name="libamtrack"; version="0.6.3"; sha256="0pdwrz19q1yls0rgr4579f31j86awizx3j31h7vdh6y70ngpmb82"; depends=[]; }; libcoin = derive2 { name="libcoin"; version="1.0-1"; sha256="1i38v0pq5snx9clhgfiymk6lq87h41pajhp2dvin30snnq0py6qq"; depends=[mvtnorm]; }; + librarian = derive2 { name="librarian"; version="1.3.0"; sha256="1nlk5v7lk56w4gq97lv1d4k1wza8zankvrzcl0996zqlgz6imz0d"; depends=[devtools]; }; librarysnapshot = derive2 { name="librarysnapshot"; version="0.1.2"; sha256="0v4x564zpm58kxs5n84bi6mcjhbzjg6a2lc30vsc8kbm3qy0nq38"; depends=[]; }; libsoc = derive2 { name="libsoc"; version="0.6.4"; sha256="1hdnqgnvzm5116gphxa55k2bc3ksr607px2s2yg1ilmmxdghdccw"; depends=[]; }; - libstableR = derive2 { name="libstableR"; version="1.0"; sha256="0qk70rl76lz2izgp2c1asx0yvi8xgfq1yg579kcygxk4pnxjdwv4"; depends=[Rcpp]; }; - lidR = derive2 { name="lidR"; version="1.5.1"; sha256="0r6y07ciajn13rhb8n57xnj1lzvz3hvjb4hm29hxclny93c45l16"; depends=[data_table future gdalUtils geometry gstat lazyeval mapedit mapview memoise RANN raster Rcpp rgeos rgl rlas settings sp]; }; - lifecontingencies = derive2 { name="lifecontingencies"; version="1.3.2"; sha256="012pfiz4l8xrwrjlzwfc0vxw1wpw2n2f2vj39mlpmg5aswg4mm8k"; depends=[markovchain Rcpp]; }; + libstableR = derive2 { name="libstableR"; version="1.0.2"; sha256="1gkcgbc8a7ks9x8mqmlz98hk55q3qy62izam7csz1s0r5dzsyqcr"; depends=[Rcpp RcppGSL]; }; + lidR = derive2 { name="lidR"; version="1.6.1"; sha256="0x5ns3p1qvakk999x42qlrhy71plvcqxp65fbj9kc07npyj6bfgw"; depends=[assertive concaveman data_table future gdalUtils geometry glue gstat lazyeval mapedit mapview memoise RANN raster Rcpp rgeos rgl rlas settings sp]; }; + lifecontingencies = derive2 { name="lifecontingencies"; version="1.3.5"; sha256="18dlp6bm9hsr99y85fxdbapn8s1daqsynpiqf2cfhyffqiwll97f"; depends=[markovchain Rcpp]; }; lifecourse = derive2 { name="lifecourse"; version="2.0"; sha256="1m8ihqvzhzpq2m2pdvh37bpq9pdbj23r3y0jkl3q8farh3qj473d"; depends=[TraMineR]; }; lifelogr = derive2 { name="lifelogr"; version="0.1.0"; sha256="1wygvw61ygpww0kahxhmjdncwg4zc2cshs0brzw18nfqaj8vpfav"; depends=[dplyr fitbitScraper ggplot2 lazyeval lubridate modelr plyr R6 shiny stringr tibble tidyr]; }; lift = derive2 { name="lift"; version="0.0.2"; sha256="0ynsyl6lw7z7bvwzk2idgxzzqji5ffnnc3bll9h4gwdw666g7fln"; depends=[]; }; - liftLRD = derive2 { name="liftLRD"; version="1.0-7"; sha256="18gcp5b5jmx37ri4b3nnqvsd0crk5wp53dh5p50arflzw0pn7qn1"; depends=[adlift nlt]; }; + liftLRD = derive2 { name="liftLRD"; version="1.0-8"; sha256="1m24f4mc70l808cpkcdm91hzb5b3bkzibvgyfi9zs6cs8apcvmy3"; depends=[adlift nlt]; }; liftr = derive2 { name="liftr"; version="0.9"; sha256="1yg9ql6rklrdcd2qds223naryg3rbdi1mbqrlf5jc3cwzhllcsa9"; depends=[knitr rmarkdown rstudioapi stringr yaml]; }; liger = derive2 { name="liger"; version="0.1"; sha256="0q26qdy7kgqj70ka2gcpji8ni2w8kxnznhp4ig2251xllw9j7dz4"; depends=[matrixStats Rcpp RcppArmadillo]; }; lightsout = derive2 { name="lightsout"; version="0.3"; sha256="0ypniqf9wk35dd9j57wd7gxchr5hy25fwhmkndz2z8b9ajhm3c9b"; depends=[magrittr shiny shinyjs]; }; @@ -8033,6 +8386,7 @@ in with self; { likelihoodAsy = derive2 { name="likelihoodAsy"; version="0.50"; sha256="009alsxsv9fjpihp3zl0a94y6cvr49nh21skba64lzz9fypm9j8l"; depends=[alabama cond digest nleqslv pracma Rsolnp]; }; likelihoodExplore = derive2 { name="likelihoodExplore"; version="0.1.0"; sha256="13cnql7pbx8qq1j3cfb3lkzzf2k55shpfa0jd00z30ys6imxzcfn"; depends=[lazyeval plyr]; }; likert = derive2 { name="likert"; version="1.3.5"; sha256="0c4irxs7pp1z8nj4s8cq23daw4h94n3h7x4f6q1d85614qcl9l3p"; depends=[ggplot2 gridExtra plyr psych reshape2 xtable]; }; + lilikoi = derive2 { name="lilikoi"; version="0.1.0"; sha256="1v7xrkv8xxmq6cdww4z1p9vlvy71cqgd3yb5mal4v9w2wrfaps6z"; depends=[caret corrplot devtools dplyr e1071 gbm ggplot2 glmnet hash Hmisc infotheo Matrix pamr princurve pROC R_oo randomForest reshape2 RWeka stringr]; }; limSolve = derive2 { name="limSolve"; version="1.5.5.3"; sha256="1ll6ir42h3g2fzf0wqai213bm82gpwjj2hfma2np3mz024sc09rg"; depends=[lpSolve MASS quadprog]; }; lime = derive2 { name="lime"; version="0.4.0"; sha256="0hml1f3fq21s45h1cg3qi4w7vdfdxcsz8q4h1429gbppbdanz9i1"; depends=[assertthat ggplot2 glmnet gower htmlwidgets magick Matrix Rcpp RcppEigen shiny shinythemes stringdist stringi]; }; limitplot = derive2 { name="limitplot"; version="1.2"; sha256="0wj1xalm80fa5pvjwh2zf5hpvxa3r1hnkh2z9z285wkbrcl0qfl2"; depends=[]; }; @@ -8043,16 +8397,20 @@ in with self; { linear_tools = derive2 { name="linear.tools"; version="1.3.0"; sha256="14lp3gifzbid82lkr7rdqajz2abp8m7y8irpwx6s8w66djjfckda"; depends=[ggplot2 magrittr plyr pryr scales stringr]; }; linearQ = derive2 { name="linearQ"; version="1.0"; sha256="0c6ccllv4zf8zgs3957zjvnkdwbv2ryrs0f5lzk1clc233vm7acm"; depends=[Rcpp stepR]; }; linemap = derive2 { name="linemap"; version="0.1.0"; sha256="0qkbmpfr742xbs3xn5ppx6q0prwrr9mk1c1mv050cm47dm7jcs6l"; depends=[sf]; }; + lineqGPR = derive2 { name="lineqGPR"; version="0.0.3"; sha256="0adrjsfqwy9wrw4hf48p7jgn985bbpv6jyhhkab19fabc84iy1jg"; depends=[broom ggplot2 MASS Matrix mvtnorm nloptr quadprog restrictedMVN tmg TruncatedNormal]; }; lineup = derive2 { name="lineup"; version="0.37-10"; sha256="1w45ll6phynn03ala0wadmp06rrgg8rcqnhz7hqy4w6q7khbkk6r"; depends=[class qtl]; }; lingtypology = derive2 { name="lingtypology"; version="1.0.13"; sha256="1v6n2wdz5zkkc1k88jpjrh6nwias496dg2vvglrjd7g4bymb7715"; depends=[leaflet leaflet_minicharts magrittr MASS rgeos rowr sp stringdist]; }; - link2GI = derive2 { name="link2GI"; version="0.3-0"; sha256="0jzk1p9cygcw0xz9hqfzx74acl4ymn3jmcjj0dxrmknsvfdzcl2d"; depends=[gdalUtils raster rgdal rgrass7 RSAGA sf sp]; }; + linguisticsdown = derive2 { name="linguisticsdown"; version="1.0.1"; sha256="1y0iwbdkm37h6777p409ac7w8xqp70g2jjcfhxpvnrvvk4v0hrrk"; depends=[dplyr DT knitr magrittr miniUI rstudioapi shiny stringr tidyr]; }; + link2GI = derive2 { name="link2GI"; version="0.3-5"; sha256="1mxbahxn5kfkvqdyg5mr4gqpbw90ik1xmxvl6a7d4dcacpsqzkl8"; depends=[devtools gdalUtils raster rgdal rgrass7 roxygen2 RSAGA sf sp]; }; linkR = derive2 { name="linkR"; version="1.1.1"; sha256="1748r7s5g0gvsmghrb7l5lmdbzb9f4vkbgj51v308jr64r1k7l93"; depends=[svgViewR]; }; linkcomm = derive2 { name="linkcomm"; version="1.0-11"; sha256="1w5sfmzvrk30fr161pk0cy5nj8kasqm6hqgyafq6r280b5s272cb"; depends=[dynamicTreeCut igraph RColorBrewer]; }; linkim = derive2 { name="linkim"; version="0.1"; sha256="0yvyid9x59ias8h436a202hd2kmqvn8k1zcrgja2l4z2pzcvfn91"; depends=[]; }; + linkprediction = derive2 { name="linkprediction"; version="1.0-0"; sha256="0p2abdq6ad689236w2d0khlycpjgy6j7xrlb96ngl6csgxwm07bl"; depends=[igraph intergraph]; }; + linkspotter = derive2 { name="linkspotter"; version="1.2.0"; sha256="0wk27jn8jr5rskjxbixshmp2dl0l74hrc8r6x3rvhy0x0b00zks2"; depends=[dplyr energy ggplot2 Hmisc infotheo mclust minerva pbapply rAmCharts shiny tidyr visNetwork]; }; linl = derive2 { name="linl"; version="0.0.2"; sha256="1n3sljyycsppk11ri9jijsif3g7v4n8xvk1n4hhx0qg65kh7wmry"; depends=[knitr rmarkdown]; }; linpk = derive2 { name="linpk"; version="1.0"; sha256="14l3vv507z7x63ziynp07902599syah0icvzq4rxfjf48bf96l63"; depends=[mvtnorm]; }; linprog = derive2 { name="linprog"; version="0.9-2"; sha256="1ki14an0pmhs2mnmfjjvdzd76pshiyvi659zf7hqvqwj0viv4dw9"; depends=[lpSolve]; }; - lintools = derive2 { name="lintools"; version="0.1.1.4"; sha256="18rqpm0cg233hclcqskdh3mfpwpbawc582j800mjalii233jzr36"; depends=[]; }; + lintools = derive2 { name="lintools"; version="0.1.2"; sha256="18layj6a202p0sy9rs022fp0a6fwvixwwmwlyzn7h9kh4y9gvxjz"; depends=[]; }; lintr = derive2 { name="lintr"; version="1.0.2"; sha256="14l6fi2mdc2swi4xw865q63yngk2b5k553qbyvnhmwq2w4pv07pn"; depends=[codetools crayon digest httr igraph jsonlite knitr rex rstudioapi stringdist testthat]; }; liqueueR = derive2 { name="liqueueR"; version="0.0.1"; sha256="0rpjib0dz39la63gy9bw9gmdfq2fcx40y4y4wcb6ky41qcjdp1nd"; depends=[itertools]; }; liquidSVM = derive2 { name="liquidSVM"; version="1.2.1"; sha256="0nw8n4qg2jijbnlza15ifzqsl4pj7gjzi4nd71zp7h0aw5mnp80x"; depends=[]; }; @@ -8065,24 +8423,24 @@ in with self; { listdtr = derive2 { name="listdtr"; version="1.0"; sha256="08drps03nndpdxswyv8bjm1bcckjav5pjj7fdx3dzyn0v4dfy619"; depends=[ggplot2]; }; listenv = derive2 { name="listenv"; version="0.7.0"; sha256="0ma5jsri2zqkrlsm9nqpikl7imbwfy1glsmk13mblw0q245h49k1"; depends=[]; }; listless = derive2 { name="listless"; version="0.0-2"; sha256="1gr6l4vih7j28kg2mj1xj2yhlpwjc4p894vsxri25vq0r9kgcdym"; depends=[magrittr tidyr]; }; - listviewer = derive2 { name="listviewer"; version="2.0.0"; sha256="0fq9jdb9yahm095m5ja9j7hlv3ggigj14nlf1pdk26xj2685j8n9"; depends=[htmltools htmlwidgets shiny]; }; + listviewer = derive2 { name="listviewer"; version="2.1.0"; sha256="09jkrrq4zyzgi66vkpm5n7isxpbckx5hjk39nik766hzarj5i7rs"; depends=[htmltools htmlwidgets shiny]; }; liteq = derive2 { name="liteq"; version="1.0.1"; sha256="080ljgb2qsfmyppnlp9acmskgq94pmdbbgbhygqkxvzda5bbas8h"; depends=[assertthat DBI rappdirs RSQLite]; }; - littler = derive2 { name="littler"; version="0.3.3"; sha256="1cbsnm4ffzld93b9q8g6g6h6yskjfwa8j1xani5682ipb7r290x7"; depends=[]; }; + littler = derive2 { name="littler"; version="0.3.5"; sha256="0zv6yr23swiw7w21qdw26jrw882wh0si7wz73fwl8d554rbhqinw"; depends=[]; }; liureg = derive2 { name="liureg"; version="1.1.2"; sha256="1zhc5fs47whjvvwwiivykxfchzbjbldyvdmqh9rp7ccwba2q3956"; depends=[]; }; - live = derive2 { name="live"; version="1.5.7"; sha256="018k2l3klhkxsb6b8xvrvxajgahb6zd02cngkkayfz2477iy8kdl"; depends=[breakDown data_table dplyr forestmodel ggplot2 lubridate MASS mlr shiny]; }; + live = derive2 { name="live"; version="1.5.8"; sha256="0idnavgmvhq2w6fa46ssaxhj5v8p3x1q8zcgmknp47s9c2h8yfrc"; depends=[breakDown data_table dplyr forestmodel ggplot2 gower lubridate MASS mlr shiny]; }; livechatR = derive2 { name="livechatR"; version="0.1.0"; sha256="1k0z6q3s9iw962m1lwlx45p95flzl5jg1xh6ng426v9jh1yyrbb2"; depends=[data_table dplyr jsonlite magrittr purrr]; }; ljr = derive2 { name="ljr"; version="1.4-0"; sha256="0jby94ml8w6pwnxbmv6qfjww2myvvnn9vrmlqpdh71dhgp3z35py"; depends=[]; }; - llama = derive2 { name="llama"; version="0.9.1"; sha256="1cvm58kivjw77a2fy1jwsajzl1d0i3i123p6glpwdlqn6rlharck"; depends=[BBmisc checkmate ggplot2 mlr parallelMap plyr rJava]; }; + llama = derive2 { name="llama"; version="0.9.2"; sha256="0knlmfddp70ddhjb9slyibbb9qj7pfybqccv3i4f545qxmmykj2n"; depends=[BBmisc checkmate ggplot2 mlr parallelMap plyr rJava]; }; lle = derive2 { name="lle"; version="1.1"; sha256="09wq7mzw48czp5k0b4ij399cflc1jz876fqv0mfvlrydc9igmjhk"; depends=[MASS scatterplot3d snowfall]; }; lllcrc = derive2 { name="lllcrc"; version="1.2"; sha256="06n1fcd3g3z5rl2cyx8jhyscq9fb52mmh0cxg81cnbmai3sliccb"; depends=[combinat data_table plyr VGAM]; }; llogistic = derive2 { name="llogistic"; version="1.0.0"; sha256="1mddwcfp6c5g36japybjrlirz0q8l7am8akbiv8c6z7jka2nwi00"; depends=[]; }; lm_beta = derive2 { name="lm.beta"; version="1.5-1"; sha256="0p224y9pm72brbcq8y1agkcwc82j7clsnszqzl1qsc0gw0bx9id3"; depends=[]; }; lm_br = derive2 { name="lm.br"; version="2.9.3"; sha256="1xadz0rygm58igk0ig0w45132gnsvjxvwqzca4m6v6i6lz9x55pf"; depends=[Rcpp]; }; lmPerm = derive2 { name="lmPerm"; version="2.1.0"; sha256="1ss2hcfxqvfq4n6hypv7jp0n0apby9payxzaswaysr5368lkidn3"; depends=[]; }; - lmQCM = derive2 { name="lmQCM"; version="0.1.1"; sha256="1rznr5ky9ngfl8afqh22r4bxkzjyibrwr62f30dcdvpyh863hj0h"; depends=[Biobase genefilter nnet]; }; + lmQCM = derive2 { name="lmQCM"; version="0.1.2"; sha256="0flir861pnvg6kkkccv7f162gd9ml4mks7pjs0041jrs7bijbh68"; depends=[Biobase genefilter nnet]; }; lmSubsets = derive2 { name="lmSubsets"; version="0.3"; sha256="1d78gbmxybxb98lapy5m7nyxc7slyxlj50xdh6a4nyckixmf9plp"; depends=[]; }; lmSupport = derive2 { name="lmSupport"; version="2.9.13"; sha256="0ln5c91mbxkymgnv2nw5m3nrm5bwckpikgb9x1qhmjc55m98wkb8"; depends=[AICcmodavg car gplots gvlma lme4 pbkrtest psych pwr]; }; - lme4 = derive2 { name="lme4"; version="1.1-17"; sha256="0czwdy1s8h3slaw73pz0h8qmqczf5135fz6i46i2dv1ql2pbq49x"; depends=[lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen]; }; + lme4 = derive2 { name="lme4"; version="1.1-18-1"; sha256="01ar4fak8zj7c1vmh9m576wchxj5qzpfqn637s7fh3fl6cpz0alq"; depends=[lattice MASS Matrix minqa nlme nloptr Rcpp RcppEigen]; }; lmeNB = derive2 { name="lmeNB"; version="1.3"; sha256="03khn9wgjbz34sx0p5b9wd3mhbknw8qyvyd5pvllmjipnir63d3q"; depends=[lmeNBBayes numDeriv statmod]; }; lmeNBBayes = derive2 { name="lmeNBBayes"; version="1.3.1"; sha256="13shfsh9x6151xy8gicb25sind90imrwclnmfj96b76p5dvhzabm"; depends=[]; }; lmeSplines = derive2 { name="lmeSplines"; version="1.1-10"; sha256="0fy6hspk7rqqkzv0czvvs8r4ishvs7zsf4ykvia65nj26w7yhyia"; depends=[nlme]; }; @@ -8104,11 +8462,12 @@ in with self; { lmom = derive2 { name="lmom"; version="2.6"; sha256="0wxlclzypg6dnvk09k26pdgn3nijl06xsa9rny5l03xzar01mz5s"; depends=[]; }; lmomPi = derive2 { name="lmomPi"; version="0.5.0"; sha256="07ggfzgvhc6kkqs8bbs6z01rbhgb0ki2y4li6r0nkiby1wcpx0py"; depends=[lmom stringr]; }; lmomRFA = derive2 { name="lmomRFA"; version="3.1"; sha256="1gq5sjdywz1jbsshrh350zad7iifml2yj8an5xa63ghxiskrxscx"; depends=[lmom]; }; - lmomco = derive2 { name="lmomco"; version="2.3.1"; sha256="0nyl18kipsab4ka5ywbmw28kkr6i09w4lc9pa96m1fh765zghjxi"; depends=[goftest Lmoments MASS]; }; - lmridge = derive2 { name="lmridge"; version="1.1"; sha256="1r4g7482iz4b7jk0gj169bj96ip2wyrff1ndkwhf0qzg6r6vqa8d"; depends=[]; }; + lmomco = derive2 { name="lmomco"; version="2.3.2"; sha256="1gqwn5yjd3zcwd5nysayf88vjhj2j1qxfgqcw63q7f2ih0xk1lqp"; depends=[goftest Lmoments MASS]; }; + lmridge = derive2 { name="lmridge"; version="1.2"; sha256="091rznzh77bmsv7sw9xmsq6s9pnljyq7qyl74kgcxss718134jr3"; depends=[]; }; lmtest = derive2 { name="lmtest"; version="0.9-36"; sha256="0sym9sm1vl6bbgq01jhz1plxqmgh8hrgrn7rw0mwvsalcn6id7xy"; depends=[zoo]; }; lmvar = derive2 { name="lmvar"; version="1.5.0"; sha256="068ib0abpvds0ibb0d6m71svv7d3l0is4kdin1wzsn633kk3zcfy"; depends=[Matrix matrixcalc maxLik]; }; - loa = derive2 { name="loa"; version="0.2.43.3"; sha256="0krrv5sicm4xvgilri8nwby6jlidx375b4sk273hxq7bhayw4hqq"; depends=[lattice MASS mgcv plyr png RColorBrewer RgoogleMaps]; }; + loa = derive2 { name="loa"; version="0.2.44.2"; sha256="16yrkl8l4wa4i3iizncm58l75l46acfr2lf4vn53crcci9xra333"; depends=[lattice MASS mgcv plyr png RColorBrewer RgoogleMaps]; }; + localIV = derive2 { name="localIV"; version="0.1.0"; sha256="0q2vjiwj301g0lqaafpk6i1cxdwgaanz9ckwj2zkzk4h3gx2afw3"; depends=[KernSmooth mgcv sampleSelection]; }; localgauss = derive2 { name="localgauss"; version="0.40"; sha256="0y0pcg2i7lr4wipxawn06hy0q11znhcn2ah6rqwnlyy8pab70pyq"; depends=[foreach MASS matrixStats]; }; localsolver = derive2 { name="localsolver"; version="2.3"; sha256="1d18rihzqf1f5j9agfp8jysll7lqk1ai23hkdqkn6wwxj442llv4"; depends=[]; }; locfdr = derive2 { name="locfdr"; version="1.1-8"; sha256="1falkbp2xz07am8jlhwlvyqvxnli4nwl188kd0g58vdfjcjy3mj2"; depends=[]; }; @@ -8119,9 +8478,10 @@ in with self; { loder = derive2 { name="loder"; version="0.2.0"; sha256="0m6g8c25dmq0wgpy8y6cbggymxdvqwb6lp2yzs5bgpq183512spb"; depends=[]; }; loe = derive2 { name="loe"; version="1.1"; sha256="1n16pgfxg9vcn729xxjbbvavg2ywbdcch9v2ph8nv3z7psc0q46c"; depends=[MASS]; }; log4r = derive2 { name="log4r"; version="0.2"; sha256="07q8m7z2sxm6n25a62invf76qakxdsijfh3272spc8xrmdmyw6rj"; depends=[]; }; - logKDE = derive2 { name="logKDE"; version="0.1.0"; sha256="1jp36v8dfdli85lzcya4nvw17fjrsfldm8v487k1s1d1s9qz55vl"; depends=[pracma Rcpp]; }; + logKDE = derive2 { name="logKDE"; version="0.3.2"; sha256="09gachibj0klqa9ijw572lwphbh9qj6zqray5byq1dh7zsiq516q"; depends=[pracma Rcpp]; }; + logNormReg = derive2 { name="logNormReg"; version="0.2-0"; sha256="1mry2vqb9sqv17xw26k637w3i3zqjgayz2ql43rbz2f5248lm0yc"; depends=[]; }; logOfGamma = derive2 { name="logOfGamma"; version="0.0.1"; sha256="0r7di0l646ycfmdjk8hli6b0v7qj0i8z3i8i7rwd3fsblb2q22vd"; depends=[]; }; - logbin = derive2 { name="logbin"; version="2.0.3"; sha256="0jvld5lh69288g80ypvqyg0s0nip9hgd8p09b91xp11vnlap0g02"; depends=[glm2 turboEM]; }; + logbin = derive2 { name="logbin"; version="2.0.4"; sha256="01gwfq9r2yy28iymxa402r8jp8km953cb5i60xnskcpzh8bv4rmf"; depends=[glm2 turboEM]; }; logconcens = derive2 { name="logconcens"; version="0.16-4"; sha256="11bk03kjlb747g54axmb0nayz226g41xvanbw79aij76vjbglv7y"; depends=[]; }; logcondens = derive2 { name="logcondens"; version="2.1.5"; sha256="1sq27klnphp74hq0l0460m9bb7lrl06mpgkg4qq8iciy3yy1mrkj"; depends=[ks]; }; logcondens_mode = derive2 { name="logcondens.mode"; version="1.0.1"; sha256="1i2c2prk5j863p3a3q3xnsv684igfi5czz3dib7zfjldpf0qyaq7"; depends=[distr logcondens]; }; @@ -8131,16 +8491,19 @@ in with self; { loggle = derive2 { name="loggle"; version="1.0"; sha256="0r1r8m2ckva17vbvwkzhq1lx6bap0kbfj9hxyk46adslcf3xxrxp"; depends=[doParallel foreach glasso igraph Matrix sm]; }; logiBin = derive2 { name="logiBin"; version="0.3"; sha256="06y5bqm3j6xdr1cd607v2sqkghnd2bv6bvxc6cz8dvp8jabqa0zm"; depends=[data_table doParallel foreach iterators partykit]; }; logihist = derive2 { name="logihist"; version="1.0"; sha256="1q3322rh3g31c5i80aw54pln0m1jgxmbx30cn31nlh3ijkvnpq9a"; depends=[ggplot2]; }; - logistf = derive2 { name="logistf"; version="1.22"; sha256="0npwqbl8rfvn6w2y0qpkckj44mvjjccj0cn9axp2wcs03cmz0rp8"; depends=[mgcv mice]; }; + logistf = derive2 { name="logistf"; version="1.23"; sha256="0f1qn7q3h0qg2qdiz69ab03qvl4xhizqg304vjak72390nj25nss"; depends=[mgcv mice]; }; logistic4p = derive2 { name="logistic4p"; version="1.5"; sha256="0h0dxyklqc95ykyril1a3d2bdnszj5l9dqbxzh2wbfmk06prvh8b"; depends=[MASS]; }; logisticPCA = derive2 { name="logisticPCA"; version="0.2"; sha256="07ikyn127ld0fjdw7x911wrswqwqpw4lbcz0iffvh6jfjkgyk341"; depends=[ggplot2]; }; + logisticRR = derive2 { name="logisticRR"; version="0.1.0"; sha256="1bk3dj3pn0rprcypwwal96xfszx3nfzfypyr8l7lp4h3v5mqbrxw"; depends=[]; }; logitchoice = derive2 { name="logitchoice"; version="0.9.4"; sha256="1vkw7cwp7nwrsj9ifn4gz21zbw9da5rph9lr3w466zxkzdkbldqj"; depends=[]; }; - logitnorm = derive2 { name="logitnorm"; version="0.8.36"; sha256="0iag05fhzrizi74bjkl909ky7zxi9yzqx6im2ki86bpczijyfxb8"; depends=[]; }; + logitnorm = derive2 { name="logitnorm"; version="0.8.37"; sha256="1a9plxsxy29j9xpvwsznbbj150h9daay5zfzlmkh5y0f7f15w3a9"; depends=[]; }; loglognorm = derive2 { name="loglognorm"; version="1.0.1"; sha256="0rhx769a5nmidpbpngs2vglsbkpgw9badz3kj3jfmpj873jfnbln"; depends=[]; }; - logmult = derive2 { name="logmult"; version="0.6.5"; sha256="0ak13nfgaima6g75rxbghl7xmagfp4qshj09x1fxh2r2rcags7dk"; depends=[gnm qvcalc]; }; + logmult = derive2 { name="logmult"; version="0.7.0"; sha256="05asjafpairgvix8gs9n5bwiwxv857wzbmni67clm2dzkh7vsn22"; depends=[gnm qvcalc]; }; + lognorm = derive2 { name="lognorm"; version="0.1.3"; sha256="02f3z7m11lnwndlahw03936l95lrhjil3ygrhi40qk5ihnq27d9z"; depends=[Matrix]; }; logspline = derive2 { name="logspline"; version="2.1.11"; sha256="0747xl0p6kigc936kyqxqgmwxsh01lb9913w7wq0q05766pnw7kq"; depends=[]; }; lokern = derive2 { name="lokern"; version="1.1-8"; sha256="1dlyvgd2i4dckd8ic3x75r4sikwalch9b2f13xp5rhkzmfzbprxq"; depends=[sfsmisc]; }; lolR = derive2 { name="lolR"; version="2.0"; sha256="0ygxm5qym1s64pa8a04jf44y786svrkhscda2x781jx8gpil753v"; depends=[abind ggplot2 irlba MASS pls]; }; + lolog = derive2 { name="lolog"; version="1.1"; sha256="03bhmzd7qw6hq82lymy183x4q2lzm5f9ish2fy7dqif1iqvkq3fq"; depends=[BH ggplot2 intergraph Matrix network Rcpp reshape2]; }; lomb = derive2 { name="lomb"; version="1.0"; sha256="06lbk7s1ilqx6xsgj628wzdwmnvbs0p03hdpx8665fhddcxh3ryy"; depends=[]; }; longCatEDA = derive2 { name="longCatEDA"; version="0.31"; sha256="0dji41lsknfwmgb2fczzm37dm97wvi45rh878w7pwlzwdh9vq8va"; depends=[]; }; longROC = derive2 { name="longROC"; version="1.0"; sha256="1fs11vqi4hy99d7shzzdvd6ic5gay6rh2027w6j0qpd04n8q88m8"; depends=[survival]; }; @@ -8148,17 +8511,19 @@ in with self; { longclust = derive2 { name="longclust"; version="1.2.2"; sha256="1yxxz8apbl1vaqzrsiq7r5ss87j2li595bkvibpkwslgwzv47dcs"; depends=[]; }; longitudinal = derive2 { name="longitudinal"; version="1.1.12"; sha256="1d83ws28nxi3kw5lgd5n5y7865djq7ky72fw3ddi1fkkhg1r9y6l"; depends=[corpcor]; }; longitudinalData = derive2 { name="longitudinalData"; version="2.4.1"; sha256="0lnvcfgj721bawl1ciz0jw83mfsnzkhg6jn824vr3qdm4rbib2vd"; depends=[class clv misc3d rgl]; }; - longmemo = derive2 { name="longmemo"; version="1.0-0"; sha256="1jnck5nfwxywj74awl4s9i9jn431655mmi85g0nfbg4y71aprzdc"; depends=[]; }; - longpower = derive2 { name="longpower"; version="1.0-16"; sha256="0hbv43y0fgbv1qiczy4kibqc7pk7whrz4kyxshg8730y8g9wyxdi"; depends=[lme4 nlme]; }; + longmemo = derive2 { name="longmemo"; version="1.1-1"; sha256="0myn2xpg0mw3x5zma0y1dza2jg3x9zj9z8xv2z8l2q9pm228xn0d"; depends=[]; }; + longpower = derive2 { name="longpower"; version="1.0-16.1"; sha256="0ywzx9rsh53mqlzxm0dzmwpxdyj187pxhjwd7cf463l4vm49qgmy"; depends=[lme4 nlme]; }; longurl = derive2 { name="longurl"; version="0.3.0"; sha256="0ysa70zlkk3ybddj3yd3vbhjnkjbrisiz5a2hgbjx10p33m1r3am"; depends=[dplyr httr purrr]; }; loo = derive2 { name="loo"; version="2.0.0"; sha256="1k2qhma7gm4l3h9wf5gh1gm09map2jqcdzz3pba4gf039n8h3gsl"; depends=[matrixStats]; }; lookupTable = derive2 { name="lookupTable"; version="0.1"; sha256="0ipy0glrad2gfr75kd8p3999xnfw4pgpbg6p064qa8ljqg0n1s49"; depends=[data_table dplyr]; }; - loon = derive2 { name="loon"; version="1.1.1"; sha256="023vrnbn4pikiq6l57phwy9zy1lp6vxrkinrffaxwicvaj58c931"; depends=[]; }; + loon = derive2 { name="loon"; version="1.2.0"; sha256="1ch5hzpyvq0vil8fwpkpjh8yxyq876shy9kyr6svs2x7jc132qvr"; depends=[gridExtra]; }; loop = derive2 { name="loop"; version="1.1"; sha256="1gr257fm92rfh1sdhsb4hy0fzwjkwvwm3v85302gzn02f86qr5dm"; depends=[MASS]; }; loopr = derive2 { name="loopr"; version="1.0.1"; sha256="1qzfjv15ymk8mnvb556g2bfk64jpl0qcvh4bm3wihplr1whrwq6y"; depends=[dplyr lazyeval magrittr plyr R6]; }; + loose_rock = derive2 { name="loose.rock"; version="1.0.9"; sha256="03713ac7farwgjidnx46j6mzm6if10b33lrpzban9lis713s8qqm"; depends=[biomaRt digest dplyr futile_options ggfortify ggplot2 MASS reshape2 rlang]; }; lordif = derive2 { name="lordif"; version="0.3-3"; sha256="1yby9fvzdi1dzvzp6d6h144k1p9nfacd8l5bd66dmhnc8sp2nlx5"; depends=[mirt rms]; }; lorec = derive2 { name="lorec"; version="0.6.1"; sha256="0mgypd8awixh1lzbh5559br4k7vi3pfmwniqhgh68wc06sc6bn65"; depends=[]; }; - lori = derive2 { name="lori"; version="0.1.0"; sha256="1sqwfai0h776i3g0gxqfagisayv428gzw9540d90nzbrg9vkj28j"; depends=[ade4 FactoMineR glmnet lars lattice logmult NLRoot pdist psych svd]; }; + lorentz = derive2 { name="lorentz"; version="1.0-0"; sha256="0irnmzsvp4jdych2j68y68yvly1w3c0fxkply7lqhw2h1hbxhlgx"; depends=[emulator magrittr]; }; + lori = derive2 { name="lori"; version="0.2.1"; sha256="0440hnb05lmvww9w7nf568j2azh4bk28z2r2fjba1mx3c2wk8h63"; depends=[ade4 FactoMineR glmnet gridExtra lars lattice NLRoot pdist psych svd]; }; lowmemtkmeans = derive2 { name="lowmemtkmeans"; version="0.1.2"; sha256="08zhdw48rzw47yzhg4s37bkliyngxs46cyb57dvng1s3m0w0dhvi"; depends=[Rcpp RcppArmadillo]; }; lpSolve = derive2 { name="lpSolve"; version="5.6.13"; sha256="13a9ry8xf5j1f2j6imqrxdgxqz3nqp9sj9b4ivyx9sid459irm6m"; depends=[]; }; lpSolveAPI = derive2 { name="lpSolveAPI"; version="5.5.2.0-17"; sha256="1gfxnjkhhyybhyg29qdrdqzwq569b6pgwjgacmw3q7aldc724cyz"; depends=[]; }; @@ -8166,12 +8531,11 @@ in with self; { lpc = derive2 { name="lpc"; version="1.0.2"; sha256="1r6ynkhqjic1m7fqrqsp7f8rpxqih5idn4j96fqrdj8nj01znv29"; depends=[]; }; lpdensity = derive2 { name="lpdensity"; version="0.2.2"; sha256="1fv1biyc12zg0wfqcr5kp761fy6n6879knvlxr2zjp6rjssi3h6d"; depends=[ggplot2]; }; lpint = derive2 { name="lpint"; version="2.0"; sha256="0p1np8wlfbax0c7ysc5fs9dai8s00h1v0gan89dbd6bx06307w2r"; depends=[]; }; - lpirfs = derive2 { name="lpirfs"; version="0.1.0"; sha256="0xkm6ds44v3g0vnh6nribysg1fbphgx81zklx82xmi5cvl5z69c1"; depends=[doParallel dplyr foreach ggplot2 mFilter Rcpp RcppArmadillo vars]; }; + lpirfs = derive2 { name="lpirfs"; version="0.1.3"; sha256="17jgk0y5xgm3g1wl0mq0sjjw1ghvs009cr5qhh5hpb1k5yk14q4n"; depends=[doParallel dplyr foreach ggplot2 Rcpp RcppArmadillo]; }; lplyr = derive2 { name="lplyr"; version="0.1.12"; sha256="1wcab8wwdzpgb61q83gfn2d34vsrd3qa4xyb9sqna6krss1ii1in"; depends=[bazar dplyr lazyeval magrittr]; }; lpme = derive2 { name="lpme"; version="1.1.1"; sha256="0si90nkgl8bqk8yvd2igdsrngiwqh8891072pfpzipifnd0f5448"; depends=[decon flexmix locpol Rcpp RcppArmadillo]; }; lpmodeler = derive2 { name="lpmodeler"; version="0.2-1"; sha256="17k67l03dkjx61p4hwswghjm6awk0zx173x9xafxrfd8jrgsf6kf"; depends=[slam]; }; lpridge = derive2 { name="lpridge"; version="1.0-8"; sha256="0jk4l95z9rcdqkc8lpp4sf1mg2dqj67rhqw1iafrxy5lx4jfaqqx"; depends=[]; }; - lqa = derive2 { name="lqa"; version="1.0-3"; sha256="141r2cd9kybi6n9jbdsvhza8jdxxqch4z3qizvpazjy8qifng29q"; depends=[]; }; lqmm = derive2 { name="lqmm"; version="1.5.4"; sha256="117g38m650mi28ff19nd71dadbdphd1ladmrip2kbsnkpcz2q37p"; depends=[nlme SparseGrid]; }; lqr = derive2 { name="lqr"; version="1.7"; sha256="110c18wc3y3nkdwjgrksw20kvvy65822njrpy4gwb100ifigw0v7"; depends=[ghyp spatstat]; }; lrequire = derive2 { name="lrequire"; version="0.1.3"; sha256="03c8h9v2xhlv7bj5jv117a27gaqaly2kdxs9zyihsm9yh9rg3d79"; depends=[]; }; @@ -8180,39 +8544,40 @@ in with self; { lsa = derive2 { name="lsa"; version="0.73.1"; sha256="1af8s32hkri1hpngl9skd6s5x6vb8nqzgnkv0s38yvgsja4xm1g5"; depends=[SnowballC]; }; lsasim = derive2 { name="lsasim"; version="1.0.1"; sha256="0bwk6bv0wp30v6p55nyd1hcvwnjjddwccyy1swf6sg7lw3fy657p"; depends=[]; }; lsbclust = derive2 { name="lsbclust"; version="1.0.5"; sha256="005kswkpp3qmrg5ij8999xambyyry5wajkawiwhv45niyi2hlkxv"; depends=[clue doParallel foreach ggplot2 gridExtra mvtnorm plyr Rcpp reshape2]; }; + lsbs = derive2 { name="lsbs"; version="0.1"; sha256="14aq80zg89lq7hffv1v1m4n7hbzqzxkazcga4y2fq40ij3v7kv6n"; depends=[ks Matrix numDeriv]; }; lsdv = derive2 { name="lsdv"; version="1.1"; sha256="0rl1xszr9r8v71j98gjpav30n2ncsci19hjlc9flzs1s20sb1xpr"; depends=[]; }; lsei = derive2 { name="lsei"; version="1.2-0"; sha256="1xl06fb3is744pxlh42wx5hn1h0ab1k31wnmsmh0524kxzcyp0a7"; depends=[]; }; lshorth = derive2 { name="lshorth"; version="0.1-6"; sha256="0nbjakx0zx4fg09fv26pr9dlrbvb7ybi6swg84m2kwjky8399vvx"; depends=[]; }; lsl = derive2 { name="lsl"; version="0.5.6"; sha256="1hwzklx1qp5ljc059j2hridg3caw4cgn7rbqs8xh2arzcvqdw3rb"; depends=[ggplot2 lavaan reshape2]; }; - lslx = derive2 { name="lslx"; version="0.6.2"; sha256="0girzjmkmqym5bnw492991smyhvlz7xw70n8hlswpa4lw3x15q2n"; depends=[ggplot2 lavaan R6 Rcpp RcppEigen]; }; - lsm = derive2 { name="lsm"; version="0.1.6"; sha256="1j68jvb7gvgr77wpq1gzh1jw3cs94im1zrlnvw4jnbgbzsmpql99"; depends=[]; }; + lslx = derive2 { name="lslx"; version="0.6.3"; sha256="1a6s1a2g87h1fd0w5ckjgmanqpvwfp6hh8mshc61917w3g8y1rdg"; depends=[ggplot2 lavaan R6 Rcpp RcppEigen]; }; + lsm = derive2 { name="lsm"; version="0.1.8"; sha256="0h7gyc4wb0y3hvs21h22l57czdd3xfycg400ncz5c9s63r47wzx3"; depends=[]; }; lsmeans = derive2 { name="lsmeans"; version="2.27-62"; sha256="1db9ldk8maj8qr2ha3aa5bz01wv4irkiw561fzjcm9slb0iz1k7z"; depends=[coda estimability multcomp mvtnorm nlme plyr xtable]; }; lspartition = derive2 { name="lspartition"; version="0.1"; sha256="1c2wp9yl0jzvbh181flzywwqmm6xr5jg9qbfibw4ja9wf6xnfx8w"; depends=[combinat ggplot2 MASS matrixStats mgcv pracma]; }; lspline = derive2 { name="lspline"; version="1.0-0"; sha256="0bc1nfpp1r5fi8rrg295k4r8pm03baqplrzwmk3sn4kdbp0apvgk"; depends=[]; }; - lspls = derive2 { name="lspls"; version="0.2-1"; sha256="1g27fqhnx9db0zrxbhqr76agvxy8a5fx1bfy58j2ni76pki1y4rl"; depends=[pls]; }; + lspls = derive2 { name="lspls"; version="0.2-2"; sha256="1cmffkyc881659l9m1miwhr3jfpwb0xb9n5chg317vcm8l9r4wcn"; depends=[pls]; }; lsplsGlm = derive2 { name="lsplsGlm"; version="1.0"; sha256="1qh68r033fwq1hc19h2srl1k6znvvvrcp38ghxadsksjfxllvniy"; depends=[]; }; lsr = derive2 { name="lsr"; version="0.5"; sha256="0q385a3q19i8462lm9fx2bw779n4n8azra5ydrzw59zilprhn03f"; depends=[]; }; lss = derive2 { name="lss"; version="0.52"; sha256="1fvs8p9rhx81xfn450smnd0i1ym06ar6nwwcpl74a66pfi9a5sbp"; depends=[quantreg]; }; + ltable = derive2 { name="ltable"; version="1.0"; sha256="1sx6bknbfkays899yq7wqpvc7izz757smaw9g9i7wii7d7a75plr"; depends=[]; }; ltbayes = derive2 { name="ltbayes"; version="0.4"; sha256="0kv5k56hmc1m7bv5pmmmk46822szsgwqgpwydn0x56az7xn6hjk6"; depends=[mcmc MHadaptive numDeriv]; }; ltm = derive2 { name="ltm"; version="1.1-1"; sha256="1qrgzwx5l58qf5rfp1knxc84r0g943q5sdr3ky74zzwpnmrf2vf7"; depends=[MASS msm polycor]; }; - ltmle = derive2 { name="ltmle"; version="1.0-1"; sha256="0g3nybhxz7mivqkzvlzkasc1m489s4fsi4874wvlhqg3x3mww0x9"; depends=[Matrix matrixStats speedglm]; }; + ltmle = derive2 { name="ltmle"; version="1.1-0"; sha256="1mlsggl0vdnlgf8j0bjmh4zrfdpmkfi9jhar35npxz9r0yfjmw8f"; depends=[Matrix matrixStats speedglm]; }; ltsa = derive2 { name="ltsa"; version="1.4.6"; sha256="10wmw9r00400ng2zlysd8jqgypjclshxj83x32002j2a9cz4f186"; depends=[]; }; ltsbase = derive2 { name="ltsbase"; version="1.0.1"; sha256="16p5ln9ak3h7h0icv5jfi0a3fbw5wdqs3si69sjbn8f5qs2hz7yp"; depends=[MASS robustbase]; }; - ltsk = derive2 { name="ltsk"; version="1.0.5"; sha256="0x142w2l6qaqw1kmx5kix7lkadaw2kl8dqx11d091vqj2imi9wlr"; depends=[fields gstat sp]; }; ltxsparklines = derive2 { name="ltxsparklines"; version="1.1.2"; sha256="1jnygg7wm2768lrrzball8rn8f60xy4nc3a18h4d32jpnbhifj13"; depends=[]; }; lubridate = derive2 { name="lubridate"; version="1.7.4"; sha256="14a823il77w3wmmnzr89vwrqp50y56dh5raycnaw6c8nv5xsh32i"; depends=[Rcpp stringr]; }; luca = derive2 { name="luca"; version="1.0-5"; sha256="1jiqwibkrgga4ahz0qgpfkvrsxjqc55i2nwnm60xddb8hpb6a6qx"; depends=[genetics survival]; }; - lucid = derive2 { name="lucid"; version="1.4"; sha256="1kwl9h7ynp8nhny51xskrbgc3060bawxjkdijhsjzss2hbbygwds"; depends=[nlme]; }; + lucid = derive2 { name="lucid"; version="1.6"; sha256="0acsnvxvr9qr6ib48dg6byqvfdw5rl65j72nvv3pvvisqj22b0pg"; depends=[nlme]; }; lucr = derive2 { name="lucr"; version="0.2.0"; sha256="0v5g72cl9fg3b3ix34bsmjwwqrnm4ivgcd5mm98c5jd8rrz1xkwq"; depends=[httr Rcpp]; }; ludic = derive2 { name="ludic"; version="0.1.6"; sha256="0srs3bx9cw89mlpg8b8vcmz2gnsv729j3n23pnnxgbh2w7xf705b"; depends=[fGarch landpred Matrix Rcpp RcppArmadillo]; }; lue = derive2 { name="lue"; version="0.2.1"; sha256="0is5rd1dz91bzphmfbbzi3s6rgc5g9qza2r26k70xs67dgn0qbjq"; depends=[ncdf4 raster]; }; lulcc = derive2 { name="lulcc"; version="1.0.2"; sha256="1vlaidyqgx5vnf8w2y1a1jmmq7z4195avnv1mryhh414r5r1kpy0"; depends=[lattice raster rasterVis ROCR]; }; - lumberjack = derive2 { name="lumberjack"; version="0.2.0"; sha256="0yn6482wrwinabys3awp0jjnzs6mnv29jjpvr980m1jm15nwva4g"; depends=[R6]; }; + lumberjack = derive2 { name="lumberjack"; version="0.3.0"; sha256="00br82x9n6x96ksqqgahc1ydffl9cv8lysm57pk2mxm0fzbcph2p"; depends=[R6]; }; lunar = derive2 { name="lunar"; version="0.1-04"; sha256="0nkzy6sf40hxkvsnkzmqxk4sfb3nk7ay4rjdnwf2zym30qax74kk"; depends=[]; }; lutz = derive2 { name="lutz"; version="0.2.0"; sha256="1ypi61b0l5pig2lvvq9lmqkqcsxhnf154lxridp0amv5rcmf2fxy"; depends=[V8]; }; luzlogr = derive2 { name="luzlogr"; version="0.2.0"; sha256="0n0cm94aianwcypa0gwdjvyy3dwbkfv6zi1gq2jn57b41fg20lq5"; depends=[assertthat]; }; lvec = derive2 { name="lvec"; version="0.2.2"; sha256="0n1l26n4khlalqd0b9bi7vc3kr5jh6mr56ca0rmnnl6bl9742nr5"; depends=[BH Rcpp]; }; - lvm4net = derive2 { name="lvm4net"; version="0.2"; sha256="0al0answp3rngq69bl3ch6ylil22wdp1c047yi5gbga853p7db0c"; depends=[ellipse ergm igraph MASS network]; }; + lvm4net = derive2 { name="lvm4net"; version="0.2.1"; sha256="0syl3bzrmpm960b2fx893xw79d7lvlhr94r5kdq9z6jayvcyq66c"; depends=[ellipse ergm igraph MASS network]; }; lvnet = derive2 { name="lvnet"; version="0.3.3"; sha256="14jik7kxljlpk0fp3gmy0i6by78higmqz1n88dy8wczcvms66ci0"; depends=[corpcor dplyr glasso lavaan Matrix mvtnorm OpenMx psych qgraph semPlot]; }; lvplot = derive2 { name="lvplot"; version="0.2.0"; sha256="01sisj2vbx2yb5w9cjzyaf9j46vh4kkw05xccq1f7wmsg69zmj6b"; depends=[ggplot2 RColorBrewer]; }; lwgeom = derive2 { name="lwgeom"; version="0.1-4"; sha256="0x58a04sklrr6vr38hbd2900b3bigdfj7zyk6pzj9y7yy5mr2cjg"; depends=[Rcpp sf units]; }; @@ -8221,12 +8586,12 @@ in with self; { m2b = derive2 { name="m2b"; version="1.0"; sha256="0agzw67mmwrw1f61yn24z5w1pgjssdapg3li0a53i3ylnij45mzr"; depends=[caret caTools e1071 geosphere ggplot2 randomForest]; }; m2r = derive2 { name="m2r"; version="1.0.0"; sha256="07zrqhva00jsp9da9ryzi8pjdrwri2mw0mqgg91r3rnl7id8safq"; depends=[gmp memoise mpoly pryr stringr]; }; mAr = derive2 { name="mAr"; version="1.1-2"; sha256="0i9zp8n8i3fxldgvwj045scss533zsv8p476lsla294gp174njr7"; depends=[MASS]; }; - mBvs = derive2 { name="mBvs"; version="1.1"; sha256="0nkm0yyzl3ajjfhprnkr7d4mkvwd86lf6ic9cyqx76isfwwz3wyq"; depends=[]; }; + mBvs = derive2 { name="mBvs"; version="1.3"; sha256="0vxwdi45pd79c3lz507wlw2alvf501q27lwvd34j6y68p3vyv1vj"; depends=[]; }; mExplorer = derive2 { name="mExplorer"; version="1.0.0"; sha256="1563d9r7f25vw5vsph21z3dwz9n40dpaiyx28ay1bbp5i1x2l3rb"; depends=[nnet qusage]; }; - mFilter = derive2 { name="mFilter"; version="0.1-3"; sha256="1cz9d8447iiy7sq47civ1lcjafqdqs40lzxm2a4alw4wy57hc2h6"; depends=[]; }; + mFilter = derive2 { name="mFilter"; version="0.1-4"; sha256="0zfsa301f1sh1wqg9ap63n5p3952y6b37c4whi2sijinfkx4q2vv"; depends=[]; }; mGSZ = derive2 { name="mGSZ"; version="1.0"; sha256="08l98i75h2h8kx9ksvzp5qr8jhf0l6n4j7rg8fcn7hk8chn8v5zh"; depends=[Biobase GSA ismev limma MASS]; }; mHG = derive2 { name="mHG"; version="1.1"; sha256="1rz5ncrvvv9h9grls15apa63v2nh9j87fmp4mwjjil37jx6a5zki"; depends=[]; }; - mMPA = derive2 { name="mMPA"; version="0.1.0"; sha256="1p9rzk1x5ldb3afr53f195vb4jdj8kw50rmv961k2jsw128mrzr5"; depends=[]; }; + mMPA = derive2 { name="mMPA"; version="1.2.0"; sha256="0g4zjknz52fpk7f436j95aw93aa8q2jwcrb1pqkm294kr276nnd9"; depends=[]; }; mQTL = derive2 { name="mQTL"; version="1.0"; sha256="0k80xvkr0b0mp3bj2s558fjxi2zf4k7ggnw6hsjm8lr84i108dks"; depends=[MASS outliers qtl]; }; mRMRe = derive2 { name="mRMRe"; version="2.0.7"; sha256="1njapjphy4b8nvrsnzrf2nbfp7mjizb7wlxgx1igfqncfhbskqfn"; depends=[igraph survival]; }; mRchmadness = derive2 { name="mRchmadness"; version="1.0.0"; sha256="0f6cb3d5dhp6b0dd0fshplp75jjbhx3v9r53pa8gmcfd10hvbqba"; depends=[dplyr glmnet Matrix rvest shiny xml2]; }; @@ -8234,6 +8599,7 @@ in with self; { maGUI = derive2 { name="maGUI"; version="2.2"; sha256="0b0iprpb4mnaj4lpaismr0f1rnq4m0b61imcx8mrffw9mx45qapv"; depends=[affy amap annotate beadarray Biobase BiocInstaller Biostrings Category convert genefilter GEOmetadb GEOquery globaltest GO_db GOstats graph gWidgets gWidgetsRGtk2 impute KEGGgraph KEGGREST limma lumi marray oligo pdInfoBuilder RBGL Rgraphviz RGtk2 RSQLite simpleaffy ssize WGCNA]; }; maRketSim = derive2 { name="maRketSim"; version="0.9.2"; sha256="1cq17zjwyf4i5lcqgxqkw805s4mr6qp89blgpmpxy8gdrbfj93m4"; depends=[]; }; maSAE = derive2 { name="maSAE"; version="0.1-5"; sha256="0v0vlj41j3ddyxv8lld39k1ryrdjin7r6bj13x2agbklb1fd4an1"; depends=[]; }; + mable = derive2 { name="mable"; version="1.0"; sha256="1ny8nfnyqj9c1n4b0m34kadpmnb4k2d81nd66cqxnz8dm9129vqj"; depends=[]; }; maboost = derive2 { name="maboost"; version="1.0-0"; sha256="18d36cgvn8p75nidfr6al458jbzwc1i7x77y1ks50y9phrz3wf65"; depends=[C50 rpart]; }; macc = derive2 { name="macc"; version="1.0.1"; sha256="1qj4mlikbqrxa6m46527xmxdbk7b3l95z6jdgpmi0ifywjiv52a4"; depends=[car lme4 MASS nlme optimx]; }; machQA = derive2 { name="machQA"; version="0.1.4"; sha256="1rdrjy9sxql2c9y691a1jrmgsv7m1ihsschixxb6wc7aahf7mav6"; depends=[machina plyr]; }; @@ -8241,32 +8607,33 @@ in with self; { macleish = derive2 { name="macleish"; version="0.3.2"; sha256="1kna1wq3p6xfzfdhw8dpdfvy4l656xcrra1f0ir86a815pm2a8l3"; depends=[dplyr etl lubridate readr rgdal rgeos sp]; }; mada = derive2 { name="mada"; version="0.5.8"; sha256="17d41kpxjf6h8j83w6jhxm71f03nc8i2aw0xaqzrpcf5rxxy8wv8"; depends=[ellipse mvmeta mvtnorm]; }; maddison = derive2 { name="maddison"; version="0.1"; sha256="1ji51wnj0ybjd30b4bwn5npyswrmcfrbxcmdlngwzvca1knh8g1c"; depends=[]; }; - maditr = derive2 { name="maditr"; version="0.5.1"; sha256="029jhapxssnrnmdf8cmdaw87gdd970538jvz6cq9k9iavw7zki7y"; depends=[data_table magrittr]; }; - madness = derive2 { name="madness"; version="0.2.3"; sha256="0qmqgrjxb0853m9kdi8cl1b9q9dljdi2zylw22asfv77f323413z"; depends=[expm Matrix matrixcalc]; }; + maditr = derive2 { name="maditr"; version="0.6.0"; sha256="1h2qvl84v0lp4fnsraar9kvlglifxjbpsascnrz3db5lrn1w53j0"; depends=[data_table magrittr]; }; + madness = derive2 { name="madness"; version="0.2.5"; sha256="1cdryb65hlqc5b1xm5xs5r3gv8zd4kq17q79345b0p8r0m6addip"; depends=[expm Matrix matrixcalc]; }; madr = derive2 { name="madr"; version="1.0.0"; sha256="0lzg75kphz4a0w6n0jbsq87g72jvrbkyas4j813mryq2nv4lmsl4"; depends=[]; }; madrat = derive2 { name="madrat"; version="1.22.1"; sha256="0wk2svhi4209p8ab8i2g9q22kswpisphb2a9ln5lzwdhnryk4ya9"; depends=[digest magclass spam stringr]; }; mads = derive2 { name="mads"; version="0.1.5"; sha256="1ac34iff9hvl1bxk3gs5s3i311g9y59nd6v9jhvnfd6wfhck7krs"; depends=[mrds]; }; madsim = derive2 { name="madsim"; version="1.2.1"; sha256="11gfyimbz363p5xy1x6rsz5fcgzcr55myc5aaz5lazjkcnfn17aq"; depends=[]; }; mafs = derive2 { name="mafs"; version="0.0.3"; sha256="1apacrk8y5b5ids62vd1kn2k28bya9pydxxmdw2dhjyzkgrakdhn"; depends=[cmprsk colorspace CombMSC Epi etm forecast forecastHybrid fracdiff ggplot2 ggseas gtable munsell numDeriv plyr quadprog Rcpp scales tictoc tidyr timeDate tseries zoo]; }; magclass = derive2 { name="magclass"; version="4.51.1"; sha256="1p4pbwjkn9ic3vqjh9m4b18s78f8wx0815n4dyg9pin8p14klzil"; depends=[abind maptools ncdf4 reshape2 sp]; }; - magic = derive2 { name="magic"; version="1.5-8"; sha256="083cgpp3v03li0h8597b3g21pd9lkbmn9pyssblnhc800mpc52vz"; depends=[abind]; }; + magic = derive2 { name="magic"; version="1.5-9"; sha256="0snmdh6vk0p6ar1swsihisinxrx7l8371dri5lk0z24ysgr5w7gs"; depends=[abind]; }; magicLamp = derive2 { name="magicLamp"; version="0.1.0"; sha256="1nfcnbqd6vawz8l3vgkbhmm462xdvaa4pn6axzmz8hl05xv2k3cv"; depends=[httr tibble]; }; magicaxis = derive2 { name="magicaxis"; version="2.0.3"; sha256="08nkf9k2ijlm52ybncfiwrghy911wpvwpvdvllcz2d4slk1vdakj"; depends=[celestial mapproj MASS plotrix sm]; }; magicfor = derive2 { name="magicfor"; version="0.1.0"; sha256="07l33fczr1x42sfxrsqq4q6r65sdflin6l8f5cgclnvx1858jdip"; depends=[]; }; - magick = derive2 { name="magick"; version="1.9"; sha256="1z6wci73kaqp3ky0pfzq9mifrhs3fdsnlzqx57c3f7aryh6f2ry2"; depends=[curl knitr magrittr Rcpp]; }; + magick = derive2 { name="magick"; version="2.0"; sha256="18y465325mhf48x2jn3jz9khwq1z2aj13wfbdkv8k3hln1sd572m"; depends=[curl magrittr Rcpp]; }; magree = derive2 { name="magree"; version="1.0"; sha256="1qkd6p5g3aigcb0f4d08gc5323alvahzmazm3bzsmz1w033xd1hh"; depends=[]; }; magrittr = derive2 { name="magrittr"; version="1.5"; sha256="1s1ar6rag8m277qcqmdp02gn4awn9bdj9ax0r8s32i59mm1mki05"; depends=[]; }; mail = derive2 { name="mail"; version="1.0"; sha256="1m89cvw5ba4d87kp2dj3f8bvd6sgj9k56prqmw761q919xwprgw6"; depends=[]; }; mailR = derive2 { name="mailR"; version="0.4.1"; sha256="1bfh3fxdqx9f9y3fgklxyslpcvhr9gcj7wsamaxzgrcsaxm8fdlw"; depends=[R_utils rJava stringr]; }; makeFlow = derive2 { name="makeFlow"; version="1.0.2"; sha256="0r7a0klgx144rnks0fhjflnf8vfyyx2544n86nnxkp6cdvw0b4pw"; depends=[dplyr RColorBrewer]; }; + makeParallel = derive2 { name="makeParallel"; version="0.1.1"; sha256="1zm8k3gzxcirq221lh1vbxsjym68vc5s58lxd03s194pgixbwydr"; depends=[CodeDepends codetools whisker]; }; makeProject = derive2 { name="makeProject"; version="1.0"; sha256="09q8xa5j4s5spgzzr3y06l3xis93lqxlx0q66s2nczrhd8nrz3ca"; depends=[]; }; - makedummies = derive2 { name="makedummies"; version="1.1.1"; sha256="0aqf7hfbajfsszmqx1id8pp8yj6fzvdsdis9z4s87llf0vxq4agl"; depends=[]; }; + makedummies = derive2 { name="makedummies"; version="1.1.2"; sha256="122s8cizycbnqc00d1njhnn3xbz9vg42f8vjqgzc9k5dhxx4v8n1"; depends=[]; }; malani = derive2 { name="malani"; version="1.0"; sha256="1jps28gfkiysr356ackxf1my5xz6rpx3a2bv68pziy2614hrqbs9"; depends=[e1071]; }; - malariaAtlas = derive2 { name="malariaAtlas"; version="0.0.1"; sha256="1c1bvfs1azvlci2yrgw5xlr460fdjwikm3vsdfz8lj1xzs1w220c"; depends=[curl dplyr ggplot2 gridExtra httr raster rgdal sp stringi tidyr xml2]; }; + malariaAtlas = derive2 { name="malariaAtlas"; version="0.0.2"; sha256="07hmnaacqkywalsajx5mzql7sil0196k930faaha0ync09idz7kz"; depends=[curl dplyr ggplot2 gridExtra httr raster rgdal rlang sp stringi tidyr xml2]; }; mallet = derive2 { name="mallet"; version="1.0"; sha256="06rksf5nvxp4sizgya7h4sb6fgw3yz212a01dqmc9p5a5wqi76x0"; depends=[rJava]; }; managelocalrepo = derive2 { name="managelocalrepo"; version="0.1.5"; sha256="180b7ikas1kb7phm4l2z1d8wi45wi0qyz2c8rl8ml3f71b4mlzgc"; depends=[assertthat stringr]; }; mandelbrot = derive2 { name="mandelbrot"; version="0.2.0"; sha256="04a288jj8h1a04r584a02wg9dm3c6zifhqwj964ybsvgb4m6g99s"; depends=[reshape2]; }; - manet = derive2 { name="manet"; version="1.0"; sha256="1hb5mv05zcv4s2bpyh3vgkyf4r78fyvcwl3p1kwlwqn9cv1lgci2"; depends=[combinat igraph MCMCpack]; }; + manet = derive2 { name="manet"; version="2.0"; sha256="1dnacgkdjmn7yiqk71qx5jgfipbpvqfdnrdd8wm0b9p8kgw4x7n4"; depends=[combinat igraph mclust MCMCpack]; }; mangoTraining = derive2 { name="mangoTraining"; version="1.0-7"; sha256="0lw46j44jhdcyh079a7zjmxcnv5c6qsfachinlwv3ild1gwggr3p"; depends=[]; }; manhattanly = derive2 { name="manhattanly"; version="0.2.0"; sha256="185fkakx4v35n4gmlpk2kfm2bm8p320q4khkw936m09zx3aqz398"; depends=[ggplot2 magrittr plotly]; }; manifestoR = derive2 { name="manifestoR"; version="1.3.0"; sha256="1bxmlg6fmr4ky9m7b65rrylspwhwc8k9s1cbxnx9dyl33wh39ci6"; depends=[base64enc dplyr DT functional htmltools htmlwidgets httr jsonlite magrittr NLP psych tibble tm zoo]; }; @@ -8275,7 +8642,8 @@ in with self; { mapReasy = derive2 { name="mapReasy"; version="1.0"; sha256="13va0z967ckwxnnianki5aj66km0x6r37nj4mz9qd3b0bps4g2kj"; depends=[Hmisc rgdal sp]; }; mapStats = derive2 { name="mapStats"; version="2.4"; sha256="18pp1sb9p4p300ffvmzjrg5bv1i7f78mhpggq83myc26c3a593na"; depends=[classInt colorspace Hmisc lattice maptools RColorBrewer reshape2 sp survey]; }; mapdata = derive2 { name="mapdata"; version="2.3.0"; sha256="0xnxh73rgcq55zrw81a2bq8yd67bxc2rafp4shf6nyrqj04iip0y"; depends=[maps]; }; - mapedit = derive2 { name="mapedit"; version="0.4.1"; sha256="1dy87kmwra917716r99hp139fbxy3z0cx03cw61b832isizd0b51"; depends=[dplyr htmltools htmlwidgets jsonlite leaflet leaflet_extras mapview miniUI sf shiny]; }; + mapdeck = derive2 { name="mapdeck"; version="0.1.0"; sha256="1d93gg0s0xn4gqrrc6p94fppyhqibfjsmxml2ck6skacryd40wm3"; depends=[googlePolylines htmltools htmlwidgets jsonlite magrittr scales shiny viridisLite]; }; + mapedit = derive2 { name="mapedit"; version="0.4.3"; sha256="0ybd9vbdpr3i3wfpcn36dqj3n9i885xycris2nwgxzc9dxb5ad7a"; depends=[dplyr htmltools htmlwidgets jsonlite leaflet leaflet_extras mapview miniUI sf shiny]; }; mapfit = derive2 { name="mapfit"; version="0.9.7"; sha256="16a318bz3my27qj0xzf40g0q4bh9alg2bm6c8jbwgswf1paq1xmx"; depends=[Matrix]; }; mapfuser = derive2 { name="mapfuser"; version="0.1.2"; sha256="1q7l6rfs6dv76ifizfqq4pdpjpb2zwzd3vvrnhdzh8vw2mrlqcjg"; depends=[doParallel dplyr foreach ggplot2 igraph lazyeval LPmerge mgcv plotly stringi tidyr visNetwork]; }; mapmisc = derive2 { name="mapmisc"; version="1.7.2"; sha256="0w0yvdnxk6gjcc86b6imq764va9f9hjan3ayw7qrbjpqx16fs7dx"; depends=[raster sp]; }; @@ -8284,12 +8652,12 @@ in with self; { mapr = derive2 { name="mapr"; version="0.4.0"; sha256="169ah9v7cpw3hmaj6n575gi1zwazf4vh59n46zghb1x68nc2gqs0"; depends=[data_table ggplot2 gistr jsonlite leaflet RColorBrewer rworldmap sp spocc]; }; maps = derive2 { name="maps"; version="3.3.0"; sha256="05i2ppl5z4p8rawgqmy3z4ia05fcblpq1vvrmrkgkkpdlhczx6hr"; depends=[]; }; mapsRinteractive = derive2 { name="mapsRinteractive"; version="0.1.0"; sha256="1qjc5hffrk2bjw6ihlna1h0k3q9s9i19l0q0mgvcm9wpjy4c8gra"; depends=[gstat raster rgdal rgeos sp]; }; - mapsapi = derive2 { name="mapsapi"; version="0.3.5"; sha256="0v33kkny98xql6m6rp2xh39rsp00r1crpin8gqw5wh5x28n20sna"; depends=[bitops magrittr plyr sf xml2]; }; - maptools = derive2 { name="maptools"; version="0.9-2"; sha256="075lmb3b62171cw2dg8fv1vwmvfzg39r1ji7jwb8s5k9dz88ry1v"; depends=[foreign lattice sp]; }; + mapsapi = derive2 { name="mapsapi"; version="0.3.7"; sha256="1mf971himbcmyfbbjppp1clwdi102kh5cvgyzpfwj9rsgx4mqjfw"; depends=[bitops magrittr plyr sf xml2]; }; + maptools = derive2 { name="maptools"; version="0.9-4"; sha256="1753kgyc4kmbb5h6knz5wgvvvj8v77kzm8lz0kwz05m5k3spa24k"; depends=[foreign lattice sp]; }; maptpx = derive2 { name="maptpx"; version="1.9-2"; sha256="1i5djmjg0lsi7xlkbvn90njq1lbyi74zwc2nldisay4xsbgqg7fj"; depends=[slam]; }; maptree = derive2 { name="maptree"; version="1.4-7"; sha256="1k7v84wvy6wz6g0dyiwvd3lvf78rlfidk60ll4fz7chvr2nrqdp4"; depends=[cluster rpart]; }; - mapview = derive2 { name="mapview"; version="2.4.0"; sha256="0gm9swj2i9f6wk0lc4kpr2f1171lys9pbycw272h3l984x8syy61"; depends=[base64enc brew gdalUtils htmltools htmlwidgets lattice leaflet png raster Rcpp satellite scales sf sp svglite uuid viridisLite webshot]; }; - mar1s = derive2 { name="mar1s"; version="2.1"; sha256="0psjva7nsgar5sj03adjx44pw0sdqnsd96m4g6k8d76pv30m1g7l"; depends=[cmrutils fda zoo]; }; + mapview = derive2 { name="mapview"; version="2.6.0"; sha256="1k8y9kj3qrih3fn0xw7nz0irhprdv8fqpxjad2djsvabmn11l51b"; depends=[base64enc brew htmltools htmlwidgets lattice leaflet png raster Rcpp satellite scales sf sp stars svglite uuid viridisLite webshot]; }; + mar1s = derive2 { name="mar1s"; version="2.1.1"; sha256="1ljkvgxrramfx1rnp2rg6516mjxaa6s96amrnmqymnyjz7wlf37l"; depends=[cmrutils fda zoo]; }; march = derive2 { name="march"; version="1.4"; sha256="1wfhm33k2j5yim56sg0wd02ypfhlp9fc138vmdsdjp6nh4y23hnj"; depends=[]; }; marcher = derive2 { name="marcher"; version="0.0-2"; sha256="0hcxbfrwniih4kvx5sxhlffz1pc87kf52v8hvaf193rhhdykis5q"; depends=[magrittr Matrix minpack_lm mvtnorm numDeriv plyr RColorBrewer scales zoo]; }; marelac = derive2 { name="marelac"; version="2.1.9"; sha256="07xhlsdzz2j5smh3v4hpm8zp4ljg9aa3i67j65hs1cq27q1jg1n7"; depends=[seacarb shape]; }; @@ -8301,27 +8669,29 @@ in with self; { marked = derive2 { name="marked"; version="1.2.1"; sha256="138m1clidyhahpz111iblff2w44m8zp0302vcj46frk1c60c46qi"; depends=[coda expm lme4 Matrix numDeriv optimx R2admb Rcpp TMB truncnorm]; }; markmyassignment = derive2 { name="markmyassignment"; version="0.8.1"; sha256="1y388s73b1zs482d1d7z40kg4hizp46lc3279xspm2ryx4m49mzj"; depends=[checkmate codetools httr lazyeval rlang testthat yaml]; }; markophylo = derive2 { name="markophylo"; version="1.0.6"; sha256="1gyj3ykwh4ljrb5s80hihy7wl89y3p4xkckspvv4ynl9lnsbm7cs"; depends=[ape numDeriv phangorn Rcpp RcppArmadillo]; }; - markovchain = derive2 { name="markovchain"; version="0.6.9.11"; sha256="0mmsj5vskbp7cs28iak5wmvx6ixq9xdd14niv7iixa19mmwc8p1d"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; }; + markovchain = derive2 { name="markovchain"; version="0.6.9.12"; sha256="042qwp0zywbqz99sp70ykjlckfpch5p02szah651x1inp2im8fc6"; depends=[expm igraph matlab Matrix Rcpp RcppArmadillo RcppParallel]; }; marl = derive2 { name="marl"; version="1.0"; sha256="0rndnf3rbcibv3gsrw1kfp5zhg37cw9wwlz0b7dbwprd0m71l3pm"; depends=[]; }; - marmap = derive2 { name="marmap"; version="1.0"; sha256="187zqmpdd4kl5dviphfzdhjlaa9bss1gx4wxxc8zgn4q1g66f4c2"; depends=[adehabitatMA DBI gdistance geosphere ggplot2 ncdf4 plotrix raster reshape2 RSQLite shape sp]; }; + marmap = derive2 { name="marmap"; version="1.0.2"; sha256="03xmp7jz2jja7m92yczc2nlcyv4qlcy7lnj3nk5wb3alh1vxlyga"; depends=[adehabitatMA DBI gdistance geosphere ggplot2 ncdf4 plotrix raster reshape2 RSQLite shape sp]; }; marqLevAlg = derive2 { name="marqLevAlg"; version="1.1"; sha256="1wmqi68g0flrlmj87vwgvyxap0miss0n42qiiw7ypyj4jw9kwm8j"; depends=[]; }; - mase = derive2 { name="mase"; version="0.1.1"; sha256="1s8hcsz3ja3rghsv0fz82mlz4sx7dwx8y7h97minhrnj9aby9g82"; depends=[boot dplyr foreach glmnet magrittr MASS Matrix Rdpack rpms survey]; }; + mase = derive2 { name="mase"; version="0.1.2"; sha256="1023xvv6yngbc183hb13057spjildywqd0jw2w9jway3zv4dbw9v"; depends=[boot dplyr foreach glmnet magrittr Matrix Rdpack rpms survey]; }; mason = derive2 { name="mason"; version="0.2.6"; sha256="01ppc7f18kf4xv4lrhib0cfm85v658grmxpny3h3kdb4pi4rbspy"; depends=[broom dplyr lazyeval magrittr tidyr]; }; matR = derive2 { name="matR"; version="0.9.1"; sha256="1qw2vqmpq7gc3dmr9r000ccjj7xa0h82waxnvryz3l17ggryyjjm"; depends=[BIOM_utils MGRASTer]; }; matchMulti = derive2 { name="matchMulti"; version="1.1.7"; sha256="0k5psmjzcyr7pm603vni7w2hvslck05r81cngm26pql2prdrv5yk"; depends=[coin Hmisc MASS mvtnorm plyr rcbsubset weights]; }; matchbook = derive2 { name="matchbook"; version="1.0.7"; sha256="0xfqg8z2zkn215kqmjjkqdwrgsk7cn4jdpxfgd6razhcbvflg48j"; depends=[]; }; - matchingMarkets = derive2 { name="matchingMarkets"; version="0.3-5"; sha256="083gnqjxvzgqd0lvg13qwzw3cp1imp4xn2nacspfxqg4878jjpn3"; depends=[lattice lpSolve partitions Rcpp RcppArmadillo RcppProgress rJava]; }; + matchingMarkets = derive2 { name="matchingMarkets"; version="0.3-6"; sha256="1vl9gmz155l6qrz0sqpirwhbd99j15zxp7gj8q6m88y5dpnhpkqs"; depends=[lattice lpSolve partitions Rcpp RcppArmadillo RcppProgress rJava]; }; matchingR = derive2 { name="matchingR"; version="1.3.0"; sha256="1rpw5a52alh5diiqr7f87vhpgp3w3f8lg8wkaqvr5idid9fkll1i"; depends=[Rcpp RcppArmadillo]; }; matconv = derive2 { name="matconv"; version="0.3.2"; sha256="0vnmqz5vzv5n0cfpgr30gkl0pv8p2b5cp3ap6mn01sxd671lx38z"; depends=[]; }; mateable = derive2 { name="mateable"; version="0.3.1"; sha256="1ka9xxicibpfg6k3njq5f5576jwj734r1mb46a2cmiyq676ks7pp"; depends=[FNN Rcpp sn]; }; + mathgraph = derive2 { name="mathgraph"; version="0.9-14"; sha256="11wcnjligjc0m0ibi7v5f9w4j2g0fmw33za8407d9fqdb0i5pf60"; depends=[]; }; mathpix = derive2 { name="mathpix"; version="0.3.0"; sha256="1a49yda4r9a6pbs641ch2kmxg3pf8zxfrfi30r19z6g15jfgdrvf"; depends=[base64enc httr magick purrr rstudioapi texPreview]; }; matie = derive2 { name="matie"; version="1.2"; sha256="1ymx49cyvz63imqw5n48grilphiqvvdirwsrv82p7jgxdyav2xv0"; depends=[cba dfoptim gplots igraph mvtnorm seriation]; }; matlab = derive2 { name="matlab"; version="1.0.2"; sha256="0m21k2vzbc5d3c93p2hk4208xyd2av2slg55q5j1ibjidiryqgd2"; depends=[]; }; - matlabr = derive2 { name="matlabr"; version="1.5.0"; sha256="0gy639fv0b85h4z96b2b3m635q4w62q63kfxfqny3pwr0r5vsc2p"; depends=[stringr]; }; + matlabr = derive2 { name="matlabr"; version="1.5.2"; sha256="1ba6cajnzldb1gmn7rf0b198h6mdh58r3frm0z0cmvbinspwz3x7"; depends=[stringr]; }; matlib = derive2 { name="matlib"; version="0.9.1"; sha256="03991ckrfk663pdi9q2a4sms9csr1dkr075dsycqggr96yp1cwh8"; depends=[car MASS rgl xtable]; }; matpow = derive2 { name="matpow"; version="0.1.1"; sha256="1a6q21ba16qfdpykmjwgmrb1kkvvyx48qg8cbgpdmch0vhibcgcp"; depends=[]; }; matrixLaplacian = derive2 { name="matrixLaplacian"; version="1.0"; sha256="1ixqdv3sz3sc79wn3vqhlq79j7x7cvl878m5hgvbcg6klfvlmmci"; depends=[scatterplot3d]; }; - matrixStats = derive2 { name="matrixStats"; version="0.53.1"; sha256="0bkiz5fm09d3512mfr2ymj9qsb1b8aic5l5m6fkaf5j7nsgvqw6z"; depends=[]; }; + matrixProfile = derive2 { name="matrixProfile"; version="0.5.0"; sha256="0nd54k878xf7hzwxawh03c3na4jfvb68afarkwrmmffjlp3i8a9g"; depends=[fftw signal TTR zoo]; }; + matrixStats = derive2 { name="matrixStats"; version="0.54.0"; sha256="0vx00ldsg2zvdrjn49jxczk2c9iaabgvzgpdka5j02ihh7hv83cg"; depends=[]; }; matrixTests = derive2 { name="matrixTests"; version="0.1.0"; sha256="0784wfp14z7lh6ylzgh9kvzs5gwapfs7ksx63jf3qwb95zfwyixx"; depends=[matrixStats]; }; matrixcalc = derive2 { name="matrixcalc"; version="1.0-3"; sha256="1c4w9dhi5w98qj1wwh9bbpnfk39rhiwjbanalr8bi5nmxkpcmrhp"; depends=[]; }; matrixpls = derive2 { name="matrixpls"; version="1.0.5"; sha256="04sshb88rq2mp3y4rrs6nkzr4kc380vx380r911c7j975l55a183"; depends=[assertive lavaan MASS matrixcalc psych]; }; @@ -8331,6 +8701,7 @@ in with self; { maxTPR = derive2 { name="maxTPR"; version="0.1.0"; sha256="13x5rz0mfha5pzahkk4x67ncz9v77sa690cyl6wigwsldsrvzr3h"; depends=[aucm Rsolnp]; }; maxadjAUC = derive2 { name="maxadjAUC"; version="0.1.0"; sha256="04zdaqmavhhrj63s2k5pqncvlzbfnxan7r0fagfka9dypwwcl5qm"; depends=[aucm Hmisc Rsolnp survival]; }; maxent = derive2 { name="maxent"; version="1.3.3.1"; sha256="1skc7d0p6kg0gi1bpgaqn2dmxjzbvcphx5x3idpscxfbplm5v96p"; depends=[Rcpp SparseM tm]; }; + maximin = derive2 { name="maximin"; version="1.0-1"; sha256="1w3b24p6r974jgd7i93wisb25n7hjk0va8bb5n0xxfdrv3z0k591"; depends=[plgp]; }; maxlike = derive2 { name="maxlike"; version="0.1-7"; sha256="0gi33hcjj456sjw7l3q4n46k4cb6m3ml3ycd93pnajxacl24swbb"; depends=[raster]; }; maxmatching = derive2 { name="maxmatching"; version="0.1.0"; sha256="1xbwrhmr8gzvlcprib7nzvqrcd355bhx7wkqxrvfk4g7dvskf9ka"; depends=[igraph]; }; maxnet = derive2 { name="maxnet"; version="0.1.2"; sha256="1rfcylbv068pz4jgry5ijszwf5fibz566s5iv0ar8dhv0fhjr86z"; depends=[glmnet]; }; @@ -8338,23 +8709,25 @@ in with self; { mazeGen = derive2 { name="mazeGen"; version="0.1.3"; sha256="192xygg3l4rpqp49sgd5hpp4h3f8wjhyldn0l8abxhsks7jd2kfb"; depends=[igraph]; }; mazealls = derive2 { name="mazealls"; version="0.2.0"; sha256="14j6syw1zkgs4cnmxzqpm6klmgvck2gg97wkzmy9al6n0biy8gmb"; depends=[TurtleGraphics]; }; mazeinda = derive2 { name="mazeinda"; version="0.0.1"; sha256="0ns4ib73y4fghf7p1wg0a05js4mqr66dpp49p1h039pqrb0f1vwd"; depends=[foreach]; }; - mbbefd = derive2 { name="mbbefd"; version="0.8.8.2"; sha256="1168r9gkz3z1qzh3pjh8s0wlpwlrk2rr1p91ldch9c001ym9y6mz"; depends=[actuar alabama fitdistrplus gsl MASS Rcpp]; }; + mbbefd = derive2 { name="mbbefd"; version="0.8.8.3"; sha256="02iijakxl96m6n1rv0xsacsyjj5b093sl07lmp62hwyv9hf3jh4k"; depends=[actuar alabama fitdistrplus gsl MASS Rcpp]; }; mbclusterwise = derive2 { name="mbclusterwise"; version="1.0"; sha256="1ilqaxcxf1k3ck910s0xqwnp88w8ag5rn1dpvaa1i7jlcldsbnhp"; depends=[ade4 doParallel foreach kknn]; }; mbest = derive2 { name="mbest"; version="0.6"; sha256="1x0f7y5hj6a35wq1xn6g7jyjn9c4zryahwlf07qrypgrcnj2m8vx"; depends=[abind bigmemory foreach lme4 logging nlme]; }; mbgraphic = derive2 { name="mbgraphic"; version="1.0.0"; sha256="0b4xr2ycx8v56fp40lnxv69qfp0yzai2hdwk3kw4wsmir91d2a91"; depends=[diptest dplyr extracat GGally ggplot2 gridExtra hexbin magrittr mgcv Rcpp scagnostics scales seriation shiny]; }; - mbir = derive2 { name="mbir"; version="1.3.1"; sha256="0wprbgjf02ybjn3yakyvz0niv2szarlmmcizdyjsaksh21byd46x"; depends=[]; }; + mbir = derive2 { name="mbir"; version="1.3.4"; sha256="151pixrqg6wj8605vf8cscmh2a1f171k8a4fzkqv4dl8f1ivwphp"; depends=[effsize psych]; }; mblm = derive2 { name="mblm"; version="0.12"; sha256="17h65bapvz89g5in3gkxq541bxgpj9pciz6i5hzhqn0bdbsb3k6r"; depends=[]; }; mbmdr = derive2 { name="mbmdr"; version="2.6"; sha256="0ss5w66hcgd8v8j9bbbp12a720sblhr2hy9kidqfr8hgjaqlch86"; depends=[logistf]; }; - mboost = derive2 { name="mboost"; version="2.9-0"; sha256="0hfw69h3j4hwwrdinmazl4abhij2drki5jp9i9qz30gyy16wf0f2"; depends=[lattice Matrix nnls partykit quadprog stabs survival]; }; + mboost = derive2 { name="mboost"; version="2.9-1"; sha256="02ia3y0fxfjl02fb1nnl93j640fyl18jm15cgxyybhf27w4jdvb7"; depends=[lattice Matrix nnls partykit quadprog stabs survival]; }; mbrglm = derive2 { name="mbrglm"; version="0.0.1"; sha256="0yxq1xk8qy5hpiqqldyrs78lp4ggdp5lj2lmh8rqq1xvsfr6nrh4"; depends=[enrichwith nleqslv]; }; mc2d = derive2 { name="mc2d"; version="0.1-18"; sha256="1ljw8ms661bsdqbfpjvvrif9n0c2i6lzxyqj4rxhxsp3dj18w3g3"; depends=[mvtnorm]; }; mcGlobaloptim = derive2 { name="mcGlobaloptim"; version="0.1"; sha256="1p8841y9a4yq51prv6iirgw9ln8jznx8nk547sc5xlznksjy1g9n"; depends=[randtoolbox snow]; }; mcMST = derive2 { name="mcMST"; version="1.0.1"; sha256="18ka76g9pgpycaw0hl8vxpabd8584q1l5d3xmrzy1zwincsg7vgs"; depends=[BBmisc checkmate ecr ggplot2 gtools lhs parallelMap reshape2 vegan]; }; mcPAFit = derive2 { name="mcPAFit"; version="0.1.4"; sha256="1h5kiry8bvdrgyqf7cqsag0b7rscwc7phayzf6h4css1667bvm0g"; depends=[PAFit RColorBrewer Rcpp]; }; - mcbiopi = derive2 { name="mcbiopi"; version="1.1.2"; sha256="12h4bv3hx1m6bsqdxj5n3b5gh98ms508am8pigz7ckmv0xkyhx85"; depends=[]; }; + mcbiopi = derive2 { name="mcbiopi"; version="1.1.6"; sha256="1caw2sy15hw2zw0bdynwnsa7hn4rly34hlxp06nwm5lssz8l2597"; depends=[]; }; mcc = derive2 { name="mcc"; version="1.0"; sha256="0p661a870bvh3xhcahqqq85azn9rjl3vacjy96jsdn86irj4s0vi"; depends=[]; }; - mcca = derive2 { name="mcca"; version="0.3.0"; sha256="0fmlqk4q2vy7gzxhvb9249f1644jlvy755cpda8kvwp9qk55bp4p"; depends=[caret e1071 MASS nnet pROC rpart]; }; + mcca = derive2 { name="mcca"; version="0.4.0"; sha256="07qqd1v70322s8z20zmhni5kfvy9izl5k2z62gdwkk29d76rg8s1"; depends=[caret e1071 MASS nnet pROC rpart]; }; + mccf1 = derive2 { name="mccf1"; version="1.0"; sha256="1d8dw3kb2p3n3kgpihbxmwvg4blvaiss4s09452xz0d1gkjk4y01"; depends=[ggplot2 ROCR]; }; mcclust = derive2 { name="mcclust"; version="1.0"; sha256="00qprmsjwbn2d0jl7p9mz8pv7k8ld3mzk862pr1grigk0lqwhx06"; depends=[lpSolve]; }; + mccmeiv = derive2 { name="mccmeiv"; version="1.1"; sha256="0k9hbdxzj2nhwckxhm4w69n93xin56c1s3fw93pp5mp82m586y5c"; depends=[numDeriv survival]; }; mccr = derive2 { name="mccr"; version="0.4.4"; sha256="1scqds1yx317qmjappy2h1m564dcmsqqfpdm8pm3plalag16xrhj"; depends=[]; }; mcemGLM = derive2 { name="mcemGLM"; version="1.1"; sha256="07ky3bvcns24qia9pyvf5lp7764h8gn2g8zr304iz4x9bq6jvsi0"; depends=[Rcpp RcppArmadillo trust]; }; mcen = derive2 { name="mcen"; version="1.0"; sha256="0dgic137n3qvxljj3f7j3kq3x2rkblxzg55hjbknspwp0i7i4lx8"; depends=[faraway flexclust glmnet Matrix]; }; @@ -8364,9 +8737,9 @@ in with self; { mcheatmaps = derive2 { name="mcheatmaps"; version="1.0.0"; sha256="1gglm32xpmim38m7fziczgqfbpcq2899lxardsrzg6j1vhmf765y"; depends=[gridBase]; }; mclcar = derive2 { name="mclcar"; version="0.1-9"; sha256="0bwnivmajsrvmwskhk44qhz4nnc0irxq83g0kzbj4wshhivnwryp"; depends=[fields maxLik nleqslv rsm spam spdep]; }; mcll = derive2 { name="mcll"; version="1.2"; sha256="0i9zqbh0l9a9mv4558gbdq9mh52chanykyfwmiymmxygxhp809sz"; depends=[locfit statmod]; }; - mclogit = derive2 { name="mclogit"; version="0.6"; sha256="13n3xbdjbpj0ddq9jv2ssd6llrif38ala6c4schih0328cklgpcj"; depends=[Matrix memisc]; }; + mclogit = derive2 { name="mclogit"; version="0.6.1"; sha256="1flq3g5jbp8nnx066wz35bg8wzlnnp9jp731w87vba483amakcds"; depends=[Matrix memisc]; }; mclust = derive2 { name="mclust"; version="5.4.1"; sha256="1vcl4nl8by2vj2k9k84imy5m850khkgd8q02a8ica1h8vz9ijgn4"; depends=[]; }; - mclustcomp = derive2 { name="mclustcomp"; version="0.3.0"; sha256="02j87p2z9z3b8kxnvnm1syjpv6axcs09fs3mnrl1n2q6jyc4gwsr"; depends=[Rcpp RcppArmadillo Rdpack]; }; + mclustcomp = derive2 { name="mclustcomp"; version="0.3.1"; sha256="0jdfdmgd46w7b38nbpd0lj9vqzi2nnf8fv0crj08lfin5ng7jvaa"; depends=[Rcpp RcppArmadillo Rdpack]; }; mcmc = derive2 { name="mcmc"; version="0.9-5"; sha256="1i3rahph8pbhi5dsyjnkazqklg4lhh3azlyvx4kvabx50q0awxn6"; depends=[]; }; mcmcplots = derive2 { name="mcmcplots"; version="0.4.3"; sha256="0187z79gmvcrwqybxh3ckhcrqi0nqhvcvlczgxfkpq95y5czprdq"; depends=[coda colorspace denstrip sfsmisc]; }; mcmcr = derive2 { name="mcmcr"; version="0.0.1"; sha256="0g64df8v6snbcmk0kynfppq1mqaz9z8apfsm1zn3ch5q2afg0kqy"; depends=[abind checkr coda tibble]; }; @@ -8381,29 +8754,31 @@ in with self; { md = derive2 { name="md"; version="1.0.4"; sha256="13z8f3p84kivk6j58fb1qpzrmml41mq9pgv9nv2gvxrhyhanzi46"; depends=[]; }; md_log = derive2 { name="md.log"; version="0.1.1"; sha256="0ix5nz38xzlhrga40hfhlfss938mrfbni2wysvz2qbpm59qxrhg0"; depends=[futile_logger]; }; mda = derive2 { name="mda"; version="0.4-10"; sha256="19g6kn6g0shidrjfffklbmzc5w7mcimrxhagx4nmpslg59ibqdkh"; depends=[class]; }; - mdatools = derive2 { name="mdatools"; version="0.8.2"; sha256="11xlfgcn8gb19alfjp268mlid9g2rl69s1nlm5plwyy5h8x0hvcj"; depends=[]; }; + mdatools = derive2 { name="mdatools"; version="0.9.1"; sha256="14q4565l7xghwrizc7qn2c6x1wq337h68gww3gxgc9jxs74axzz2"; depends=[]; }; mded = derive2 { name="mded"; version="0.1-2"; sha256="1j8fcz5yc70p9qd9l010xj1b625scdps8z1pqh75b45p2hiqbhlc"; depends=[]; }; mdendro = derive2 { name="mdendro"; version="1.0.0"; sha256="0pxw4zkv38syajcsbcp5f5wn8bw0ah4ay950iyhql044hlmav99j"; depends=[rJava]; }; mdftracks = derive2 { name="mdftracks"; version="0.2.0"; sha256="0l8dc6ljrhbm8jwadaa3xkf6nx90vyiig15p7rryswczz9hw5ga6"; depends=[hellno]; }; - mdmb = derive2 { name="mdmb"; version="0.7-19"; sha256="0clygi60wllc04spbm4982qpnsabjapmbjn5k0k9yl1xbd6960g1"; depends=[CDM coda MASS miceadds Rcpp RcppArmadillo sirt TAM]; }; + mdhglm = derive2 { name="mdhglm"; version="1.8"; sha256="1myky8d2ilwdliqrzd2i5qvja82iz7w6qbigl7h4znpk8pdgrjb3"; depends=[boot Matrix mvtnorm]; }; + mdir_logrank = derive2 { name="mdir.logrank"; version="0.0.4"; sha256="0bhsr005dq9v85sjm2g9xlpksxwzsmsk14g0q5v3hkjvm5wk6xmv"; depends=[MASS]; }; + mdmb = derive2 { name="mdmb"; version="0.11-7"; sha256="15czj7vfghaipppv41ma6ysq1zcfx9v5v33ivvlrzg7cv0dqf6jp"; depends=[CDM coda MASS miceadds Rcpp RcppArmadillo sirt TAM]; }; mdpeer = derive2 { name="mdpeer"; version="1.0.1"; sha256="1vsqhah8h47s8k687fwa352549mdz16mwk1g7rcmhx75c2k85w2q"; depends=[boot ggplot2 glmnet magic nlme nloptr psych reshape2 rootSolve]; }; - mds = derive2 { name="mds"; version="0.1.0"; sha256="16c40m5fmj02is4vw9w284dn9pimlqp905p5ka0jw91krawasd2x"; depends=[lubridate parsedate]; }; - mdsOpt = derive2 { name="mdsOpt"; version="0.3-1"; sha256="0fyzmbaqnj42nhl32cj1kycrqkfx2qvb5vpi0qj98fi6iwsa4psq"; depends=[animation clusterSim plotrix smacof smds spdep symbolicDA]; }; + mds = derive2 { name="mds"; version="0.2.0"; sha256="1z98lz6nfh4x8zg906glj3jfq005hh8h0gzmzmdf7n6fx613p4x2"; depends=[lubridate parsedate]; }; + mdsOpt = derive2 { name="mdsOpt"; version="0.3-2"; sha256="1cdsg4adxy3x1ml68i47v0bgyyrsha2wghc504pski1df1nxz2kg"; depends=[animation clusterSim plotrix smacof smds spdep symbolicDA]; }; mdscore = derive2 { name="mdscore"; version="0.1-3"; sha256="10cl5r6kd9chdik5v0q91x40xpw2cjvvyi220z4bvngpb0989x8j"; depends=[MASS]; }; mdsdt = derive2 { name="mdsdt"; version="1.2"; sha256="0nbzc54jac4wmfyrs821ycxh749cb1zfxcws0nbpk35rydqkc627"; depends=[ellipse mnormt polycor]; }; mdsr = derive2 { name="mdsr"; version="0.1.6"; sha256="1z0sjrvnvm1bgifapmaay57lr5dgj84xzppwn579g8kammaav89x"; depends=[babynames DBI dbplyr downloader dplyr ggplot2 mosaic RMySQL]; }; - mdsstat = derive2 { name="mdsstat"; version="0.1.0"; sha256="0k7sddnydxy39idk8z1j2632xyikpvdjdcm9xk72k0yj0cw6mr9r"; depends=[lubridate mds]; }; + mdsstat = derive2 { name="mdsstat"; version="0.2.0"; sha256="12gr54lpxzs682mln21899gb3ma202a20j87p030p99fp71vbw42"; depends=[lubridate mds]; }; mdw = derive2 { name="mdw"; version="2017.12-03"; sha256="054vssnypbik0yf6smicggnkrqf6kx8k21nbf5rminsh00sx39k1"; depends=[]; }; - meaRtools = derive2 { name="meaRtools"; version="1.0.3"; sha256="03b3267h61kc9xgyl3j2n6i6rmm31rhzdlqa15qifsld23z72rs0"; depends=[emdist ggplot2 gridExtra gtools lattice plyr Rcpp reshape2]; }; + meaRtools = derive2 { name="meaRtools"; version="1.0.4"; sha256="1nxyvdq4670696mhg0svxxlvk9hnr8szai8b18pw6754kmw1bjvn"; depends=[emdist ggplot2 gridExtra gtools lattice plyr Rcpp reshape2]; }; meanShiftR = derive2 { name="meanShiftR"; version="0.52"; sha256="0mignhiz6vjpjbxg4dkc4g5mnf5mr7ifdpj7ickhspallj6l8508"; depends=[]; }; meanr = derive2 { name="meanr"; version="0.1-1"; sha256="080x21jnbsl6qlrgv12p9qd332ciph3lh18fgs9jagfyygf4f9hg"; depends=[]; }; measuRing = derive2 { name="measuRing"; version="0.5"; sha256="0yblqkv5444y75jkb6d0zs728i6vybm294h7b5622pwfjqlfhnh2"; depends=[dplR pastecs png tiff]; }; measurements = derive2 { name="measurements"; version="1.2.0"; sha256="1k47xmydgd9lhc6phr40zphnibiq817f5nf8619ibla2pridjn1l"; depends=[]; }; - measures = derive2 { name="measures"; version="0.1"; sha256="1sksgp7csmwx3z981fhi2pf75kkxhfjy2zkdw8ds5iz95hd236ih"; depends=[]; }; + measures = derive2 { name="measures"; version="0.2"; sha256="1pp6nz30fbsqsvznim9j4vvz3z57sq5r234807flxfy0w7knydbd"; depends=[]; }; meboot = derive2 { name="meboot"; version="1.4-7"; sha256="1i0h71aj49hyj889447s611gz668ys7xlr1i82b5nvaf6chfbfin"; depends=[dynlm nlme]; }; mederrRank = derive2 { name="mederrRank"; version="0.0.8"; sha256="1fvvik3bhjm6c0mhi2ma915986k2nj3lr2839k5hfrr7dg3lw3f4"; depends=[BB numDeriv]; }; medfate = derive2 { name="medfate"; version="0.2.2"; sha256="1vw9j04063sjwyfdkk94xsgz5zps7vmqha6dbsvi8ncb951cfijp"; depends=[meteoland Rcpp sp spdep]; }; - medflex = derive2 { name="medflex"; version="0.6-4"; sha256="0nd9izvmmpdw87y5f0hrz2fml51x53zvvn0irdc1ass3cj1b7bxc"; depends=[boot car Matrix multcomp sandwich]; }; + medflex = derive2 { name="medflex"; version="0.6-6"; sha256="04cjqhyihxf1imbl9y9s58qpy6lmxsh2gwy4bras03hx52slzl5r"; depends=[boot car Matrix multcomp sandwich]; }; mediation = derive2 { name="mediation"; version="4.4.6"; sha256="0prhpy9y26s388p9gv5sv4h5airixwy6ffjphhxmyp9h07088xxi"; depends=[Hmisc lme4 lpSolve MASS Matrix mvtnorm sandwich]; }; medicalrisk = derive2 { name="medicalrisk"; version="1.2"; sha256="1zdxv3rj7768kbyxfvr9n0hp4z7y0sf3r7ssqv731hjjp656l6xp"; depends=[hash plyr reshape2]; }; medicare = derive2 { name="medicare"; version="0.2.1"; sha256="00a1gml2khzisdavnaip6ap4bw45b17nbl9cqb1mqrm4y0p9gm16"; depends=[]; }; @@ -8417,34 +8792,38 @@ in with self; { melviewr = derive2 { name="melviewr"; version="0.0.1"; sha256="19syc3d6zc0hmcjjdj7ibrdqxcdlh95ny970f3ska453qh1898b2"; depends=[cairoDevice gtools gWidgets gWidgetsRGtk2 jsonlite RColorBrewer RGtk2 RNifti]; }; mem = derive2 { name="mem"; version="2.13"; sha256="1k8nda479k7w9jll2wxiasx06nz39vdcz8mssfj33amb6bk874kp"; depends=[boot dplyr EnvStats ggplot2 mclust RColorBrewer RcppRoll reshape2 sm stringr tidyr]; }; memapp = derive2 { name="memapp"; version="2.10"; sha256="0kkim1mrajpc7b20snsrmwcki2mc2winha4lq4ybb22s16isw4p0"; depends=[dplyr DT foreign formattable ggplot2 haven magrittr mem openxlsx plotly RColorBrewer readxl RODBC shiny shinyBS shinydashboard shinyjs shinythemes stringi stringr tidyr]; }; - meme = derive2 { name="meme"; version="0.2.0"; sha256="17zpnspc90nlga3iyl4ahasr70mnrhzja4pz7zhmjddhzjs8x3sz"; depends=[ggplot2 magick showtext sysfonts]; }; + meme = derive2 { name="meme"; version="0.2.1"; sha256="0ddrm82190f8yahnann1l5fwn55msfhhcizbr0vkb098x6m2l251"; depends=[ggplot2 gridGraphics magick showtext sysfonts]; }; memery = derive2 { name="memery"; version="0.5.0"; sha256="0bin1rmna5z0y568jbnga7pcrkgjy04av3bzcyf3fpvqqmn36r8f"; depends=[Cairo colourpicker cowplot ggplot2 jpeg magrittr png purrr shiny shinyBS shinycssloaders showtext sysfonts]; }; memgene = derive2 { name="memgene"; version="1.0"; sha256="00b1mi2hvzzps542mh2p96s27kjqkpcic7djklfcwnfn1m4bz0i5"; depends=[ade4 gdistance raster vegan]; }; - memisc = derive2 { name="memisc"; version="0.99.14.9"; sha256="1gh6shm9nwfjwfi5f4cz2jsldfdnkj6f73279l86wki5gdf36zri"; depends=[lattice MASS repr]; }; + memisc = derive2 { name="memisc"; version="0.99.14.12"; sha256="0n8gl031n33r4iymlp3mnfilm9qwahxssrk4wlxfyp08w4mjlhjl"; depends=[lattice MASS repr]; }; memo = derive2 { name="memo"; version="1.0.1"; sha256="14nvqi1qsin45ksd0wp9cigjk1gghr4jijdqkaqh177dwa244r9j"; depends=[digest]; }; memoise = derive2 { name="memoise"; version="1.1.0"; sha256="034qfc2xlh30x1q2vya239w34a3ir3y2fwnx2agbgbi6592zjxmj"; depends=[digest]; }; + memor = derive2 { name="memor"; version="0.1.1"; sha256="1l54hrbrccl6imfjj6lmb0rsfl5f5f87vaap43i4j0nbbm0y3jsb"; depends=[knitr rmarkdown yaml]; }; memuse = derive2 { name="memuse"; version="4.0-0"; sha256="1g63nssxrgqgzw8qjz8202qpwhps8fbck6pn77j2wsc82dm73y7v"; depends=[]; }; - merDeriv = derive2 { name="merDeriv"; version="0.1-4"; sha256="1gkxc2bf4fx3vbf1nq1g713hhhx7031wchxmgr2ydwfrighwf8qg"; depends=[lme4 Matrix nonnest2 sandwich]; }; + merDeriv = derive2 { name="merDeriv"; version="0.1-5"; sha256="1mnrjppn4gw5rikmdxpdx8xd31wj9f3mvjkfznvhig869wzr6p4z"; depends=[lme4 Matrix nonnest2 sandwich]; }; merTools = derive2 { name="merTools"; version="0.4.1"; sha256="1224cmkxbkd3r10z73ww0s1nyzg00x55fv91pn1gp8p7cmpp0ni2"; depends=[abind arm blme broom dplyr DT foreach ggplot2 lme4 mvtnorm shiny]; }; + merlin = derive2 { name="merlin"; version="0.0.1"; sha256="14k8kz8icj3wgd3li83v0wfl61pdc97r7qjcsmmc5srp36kbw1i9"; depends=[MASS randtoolbox statmod survival]; }; merror = derive2 { name="merror"; version="2.0.2"; sha256="13d9r5r83zai8jnzxaz1ak40876aw20zbpr244gs55rvj5j7f87q"; depends=[]; }; messaging = derive2 { name="messaging"; version="0.1.0"; sha256="0q19cqp1zgh0yhk1ql0jqf414bhx6jwhkairq6wx2cmkli2g7k1y"; depends=[dplyr glue magrittr rlang stringr]; }; - metRology = derive2 { name="metRology"; version="0.9-26-2"; sha256="1i9lxgphn8nmkcp2zgjs6ylbccmfgv9lfch00xmx1xfb538jz82q"; depends=[MASS numDeriv robustbase]; }; + metRology = derive2 { name="metRology"; version="0.9-28-1"; sha256="1syjwblyd18myxrs0hx4m91fgb6zs3r4g7w701j2f2pw6j9mvz0y"; depends=[MASS numDeriv robustbase]; }; metScanR = derive2 { name="metScanR"; version="1.2.0"; sha256="1x32f23w5f3s7sc5gbbqzq9s83clarskj9vpnfnwryrx87dg1jjc"; depends=[geosphere leaflet plyr RColorBrewer RCurl]; }; meta = derive2 { name="meta"; version="4.9-2"; sha256="1hzf6jphgz61d3rq8dqbyw3iddyv2x5a3xik3b606p8si19b66sh"; depends=[]; }; - meta4diag = derive2 { name="meta4diag"; version="2.0.7"; sha256="024rxnqzw9xydy0mm1w38s739qgkzjsifq23bwpvkwj0x0jnwry0"; depends=[caTools shiny shinyBS sp]; }; + meta4diag = derive2 { name="meta4diag"; version="2.0.8"; sha256="1ila8x9r1rdmlwfpzfx1zj5yx1m4yrbhyb74db4wqbh1dswn7zsm"; depends=[caTools shiny shinyBS sp]; }; metaBLUE = derive2 { name="metaBLUE"; version="1.0.0"; sha256="0ppn4bvr10z32pghmv4wjv86k6n5y5bkfxc6h5mvb556v6jnl6d8"; depends=[Matrix]; }; metaBMA = derive2 { name="metaBMA"; version="0.3.9"; sha256="14c3q4aw89r3apzm0ils886xsc6agbn8d2wgp47dc2ddwf5n8p58"; depends=[coda LaplacesDemon logspline mvtnorm runjags]; }; + metaDigitise = derive2 { name="metaDigitise"; version="1.0.0"; sha256="04hycv9dpy39l8fhql69mcn5w97f7sjxrhiz5vbpbawvfbkl0f0l"; depends=[magick purrr]; }; metaLik = derive2 { name="metaLik"; version="0.43.0"; sha256="1li40pgd9z00nrph9njwn6wysb1i9dkpqzcp6fzds6asvcxlqqfl"; depends=[]; }; metaMA = derive2 { name="metaMA"; version="3.1.2"; sha256="1mjyz06q1kc8lhfixpym4ndpnisi1r849fj3da6riwfd6ab1v181"; depends=[limma SMVar]; }; metaMix = derive2 { name="metaMix"; version="0.2"; sha256="0xlsdgincxwjzyr4i8qfmfw2wvgf41qbmyhf2rxcbarf7rmwhmqf"; depends=[data_table ggplot2 gtools Matrix Rmpi]; }; metaRNASeq = derive2 { name="metaRNASeq"; version="1.0.2"; sha256="1xz7df7ypq4326yg429pgxd6aldp14c3h3qi20j5nqr5xgsdgzqa"; depends=[]; }; - metaSEM = derive2 { name="metaSEM"; version="1.1.0"; sha256="1jhlv93a53pnksllrvqiqv5229cvxfa2mk768yncdfv67d04vwj9"; depends=[ellipse lavaan MASS Matrix mvtnorm numDeriv OpenMx]; }; - metaboGSE = derive2 { name="metaboGSE"; version="1.0.2"; sha256="1nfcjplry2ba98yi3flk6zcvlys57gri3582mylh543xkcvlrifz"; depends=[AnnotationDbi ape Matrix sybil topGO]; }; + metaSEM = derive2 { name="metaSEM"; version="1.2.0"; sha256="0b10as2bb5f31r59548v1j8saxd16icrsg915j2yv3nxzyi5iq7f"; depends=[ellipse lavaan MASS Matrix mvtnorm numDeriv OpenMx]; }; + metaboGSE = derive2 { name="metaboGSE"; version="1.1.0"; sha256="0idx3vsn2jdxyii6y3h5is7rh084brng1dvalqjjqbbhwjcg51vc"; depends=[AnnotationDbi ape Matrix sybil topGO]; }; metabolomics = derive2 { name="metabolomics"; version="0.1.4"; sha256="0m5d2784mkpkkg396y3vpvf38vmba5kvxarilq3zf818vjs4pnax"; depends=[crmn gplots limma]; }; metacart = derive2 { name="metacart"; version="1.0-0"; sha256="13dp9yz6yjd2jc7lf3w3ac3vk69ry7zygf6xnvzrcwsdmxd0258n"; depends=[ggplot2 gridExtra rpart rpart_plot]; }; - metacoder = derive2 { name="metacoder"; version="0.2.1"; sha256="1l054p870679ni57l234bvma88s7cpr2ddryb87dxfh5510y86bb"; depends=[ape biomformat cowplot crayon dplyr GA ggfittext ggplot2 ggrepel igraph lazyeval magrittr phylotate RColorBrewer Rcpp RCurl readr reshape reshape2 rlang scales seqinr stringr taxa taxize traits vegan zoo]; }; - metacom = derive2 { name="metacom"; version="1.5.0"; sha256="1zsnzzxv3vsj1swybhh6g8ddffp4xrn081y192xa6a78ii8q4kav"; depends=[vegan]; }; + metacoder = derive2 { name="metacoder"; version="0.3.0"; sha256="10gg7kqp512xdfhkpjk48xcfiwc04967lxkhxhfblm6y5fmgwjba"; depends=[ape biomformat cowplot crayon dplyr GA ggfittext ggplot2 ggrepel igraph lazyeval magrittr phyloseq phylotate RColorBrewer Rcpp RCurl readr reshape reshape2 rlang scales seqinr stringr svglite taxa taxize traits vegan zoo]; }; + metacom = derive2 { name="metacom"; version="1.5.1"; sha256="18n3mbmjna3db44gscsdgv1j8f11jhikiw7yg3vbw2a9v5w3ypkv"; depends=[vegan]; }; metacor = derive2 { name="metacor"; version="1.0-2"; sha256="04k3ph0yg3jp8x4g6l1h4m0qwl51mx0626xmm0fzr1pv4b4a1ypw"; depends=[gsl rmeta]; }; + metadynminer = derive2 { name="metadynminer"; version="0.1.2"; sha256="1py7m8l4fjswap0h41svgg8r1vhsvzxc2g3631php93k1fnpz0v7"; depends=[Rcpp]; }; metafolio = derive2 { name="metafolio"; version="0.1.0"; sha256="18s78lljwnn3j0l3mqc0svszcb3c8yzyzlpnimndbiq9yxagxnnf"; depends=[colorspace MASS plyr Rcpp RcppArmadillo]; }; metafor = derive2 { name="metafor"; version="2.0-0"; sha256="0h14wd7hr1d40p5r70f2jgdgj24jwpnr4nrj6yp5qjr466v81z96"; depends=[Matrix nlme]; }; metaforest = derive2 { name="metaforest"; version="0.1.2"; sha256="0ppv9vdwxggccn2202snl13vid3v2kx5ps81cadghg2kcd8axfbs"; depends=[ggplot2 gtable metafor mmpf ranger]; }; @@ -8453,10 +8832,11 @@ in with self; { metagen = derive2 { name="metagen"; version="1.0"; sha256="0jvbm22976aqvmfnjzs51n2w099yj5hpx6hd0pgvbia80jk7b9vk"; depends=[BatchExperiments BatchJobs BBmisc ggplot2 lhs MASS metafor ParamHelpers plyr]; }; metaheur = derive2 { name="metaheur"; version="0.2.0"; sha256="1rr5mjx3v87alj7cl9hxldvhhbpkz1fzmymmkqv0hs65pny6gbqw"; depends=[doParallel foreach ggplot2 preprocomb reshape2]; }; metaheuristicOpt = derive2 { name="metaheuristicOpt"; version="1.0.0"; sha256="1wzy5dnmrdfdj1386snjyisrbzbq8v4qsnq57l3wvkg1pgnz1vh2"; depends=[]; }; + metamedian = derive2 { name="metamedian"; version="0.1.0"; sha256="0xs967cy7z04ry90h8q38znd6idg960g5dq4dy5a8ff5qb34kflc"; depends=[Hmisc metafor]; }; metamisc = derive2 { name="metamisc"; version="0.1.9"; sha256="0wjwx7ncplpchwbz0l4xmsmy0faj2wnqjxvxyi05992v3rjv4j8k"; depends=[ellipse ggplot2 lme4 metafor mvtnorm plyr]; }; - metansue = derive2 { name="metansue"; version="2.1"; sha256="0mklpnb9m0pynz3x0fin003zz0n1v6i0fdcahny70y1yxiy5agcs"; depends=[]; }; - metap = derive2 { name="metap"; version="0.9"; sha256="03vg0mb6q7j2z0pkxykbak0hcp6dcak7zxs1lw9hswz9kqrq5jhz"; depends=[lattice]; }; - metaplot = derive2 { name="metaplot"; version="0.4.9"; sha256="1nbnyh03n1kkkl4v80nbbbnkrzs1a5ri210x9q4m2v87jrcikllw"; depends=[dplyr encode lattice magrittr rlang tidyr]; }; + metansue = derive2 { name="metansue"; version="2.2"; sha256="0qawsgskvsaj0h6igb4phajs5wwjrr1j07dpn86b6r0fdc2y2xzj"; depends=[]; }; + metap = derive2 { name="metap"; version="1.0"; sha256="18rzvqfzyk8fn54gjvy2qd21nk9w69j7ihww477ma3f3ab6i982h"; depends=[lattice Rdpack]; }; + metaplot = derive2 { name="metaplot"; version="0.8.0"; sha256="10nb3xiy2dqxk51dpyg435r99hmj23agi2kly7y7vy2404142bq6"; depends=[dplyr encode ggplot2 gridExtra gtable lattice magrittr rlang scales tidyr]; }; metaplotr = derive2 { name="metaplotr"; version="0.0.3"; sha256="01iala6cxsxv30fnlh80md5mpy3ksd2piw90zcls8f68g1c6v1jy"; depends=[ggplot2 gridExtra]; }; metaplus = derive2 { name="metaplus"; version="0.7-11"; sha256="05pkgw0zlq3q9mvdw2yxz9mxzqwq3c8q6cwvh87cigw1pf8y9an7"; depends=[bbmle boot fastGHQuad lme4 MASS metafor numDeriv]; }; metasens = derive2 { name="metasens"; version="0.3-2"; sha256="1wxp6gzq3wmas8hm8vqxclawxkc4p8dw2apzmg0nciqvas6dzic8"; depends=[meta]; }; @@ -8467,24 +8847,24 @@ in with self; { meteo = derive2 { name="meteo"; version="0.1-5"; sha256="0n37plka9vsxwd03lca3h6m8dcz3f1bi46jn3bz7vyilnkq9hcdk"; depends=[gstat plyr raster rgdal snowfall sp spacetime]; }; meteoForecast = derive2 { name="meteoForecast"; version="0.52"; sha256="1v9p2l45jzzim10pmy4y1hzc68sxawd996sri6dw7hnalfqfiyxj"; depends=[ncdf4 raster sp XML zoo]; }; meteogRam = derive2 { name="meteogRam"; version="1.0"; sha256="167gyxjnl4dyfqs3znv8sdpkvpqdxzdqi1g730s30gycrm9snap9"; depends=[ggplot2 RadioSonde]; }; - meteoland = derive2 { name="meteoland"; version="0.7.1"; sha256="1nsn4z3gbkcdhgyn13fjcpsyb0lb85kiyy6fhirlnw63dwr56a2l"; depends=[curl ncdf4 ncdf4_helpers qmap Rcpp rgdal sp spdep]; }; + meteoland = derive2 { name="meteoland"; version="0.7.7"; sha256="0gsj44kigfiq92qg7aiw6ln0i421zf4vjs4w298ci0c9hd1lmphl"; depends=[httr jsonlite knitr ncdf4 ncdf4_helpers Rcpp rgdal sp spdep]; }; metricTester = derive2 { name="metricTester"; version="1.3.4"; sha256="1z4z8km1jr0azh2zxp1sffm5picc9y6w9yn68zr1axli0l64y3a0"; depends=[ape doParallel dplyr foreach geiger MASS picante plotrix spacodiR]; }; metricsgraphics = derive2 { name="metricsgraphics"; version="0.9.0"; sha256="1zbx82b34y0rr4w7rzvyc1nzk95w6cdkg0j1kkshbmkvplq6v9i4"; depends=[htmltools htmlwidgets magrittr]; }; - mets = derive2 { name="mets"; version="1.2.3.1"; sha256="0v6w2gy88mds9ynmlbdx67zhl61x71i9nj2km5wvzrn5kcn1500p"; depends=[lava numDeriv Rcpp RcppArmadillo survival timereg]; }; + mets = derive2 { name="mets"; version="1.2.4"; sha256="1xchww1y9zf2h5qfqa1j0vhzzccrh9qj4xzgr23p5svjgcqx8r1b"; depends=[lava numDeriv Rcpp RcppArmadillo survival timereg]; }; mev = derive2 { name="mev"; version="1.11"; sha256="0iqcslnchap8zh4s3bllqqb8z0klpzg2pn8ays1xk66lj5ywl390"; depends=[boot evd gmm ismev nleqslv nloptr numDeriv Rcpp RcppArmadillo revdbayes rootSolve]; }; mewAvg = derive2 { name="mewAvg"; version="0.3.0"; sha256="16gc78ccjffp9qgc7rs622jql54ij83ygvph3hz19wpk22m96glm"; depends=[]; }; mexhaz = derive2 { name="mexhaz"; version="1.5"; sha256="0my53dg321xfbbkxawxcggnh5gw9qkliji5gsdb8m1fi37djd67w"; depends=[MASS numDeriv statmod survival]; }; - mfGARCH = derive2 { name="mfGARCH"; version="0.1.5"; sha256="0p7cnizhf1cgkzhja74p257k31hb6b7y4qnn3k9yawscdmg3zy50"; depends=[numDeriv Rcpp zoo]; }; + mfGARCH = derive2 { name="mfGARCH"; version="0.1.7"; sha256="086596dj6xz7by6rwddvyl7ap341q5hmpc6pslcjn0yvbc7j0wkh"; depends=[numDeriv Rcpp zoo]; }; mfe = derive2 { name="mfe"; version="0.1.1"; sha256="0z9ddkck1z14b9cwvaam0xh869lh2fsjm1d3i8giyrcry0vvpp61"; depends=[cluster e1071 infotheo MASS rpart rrcov]; }; mfp = derive2 { name="mfp"; version="1.5.2"; sha256="1i90ggbyk2p1ym7xvbf4rhyl51kmfp6ibc1dnmphgw15wy56y97a"; depends=[survival]; }; mfx = derive2 { name="mfx"; version="1.1"; sha256="1zhpk38k7vdq0pyqi1s858ns19qycs3nznpa00yv8sz9n798wnn5"; depends=[betareg lmtest MASS sandwich]; }; mgarchBEKK = derive2 { name="mgarchBEKK"; version="0.0.2"; sha256="1k4c34srnckbh5kchzmm44l91ma9sw0gi4y225igs3cl79212q9c"; depends=[mvtnorm tseries]; }; mgc = derive2 { name="mgc"; version="1.0.1"; sha256="0bdj890v2rinsddny8kwa48cgqh9qlzfd7k5s4i9mg40ajr0f291"; depends=[MASS SDMTools]; }; mgcViz = derive2 { name="mgcViz"; version="0.1.1"; sha256="1vv76cmfva1lsi921i337m44m9vykfp4rb9xidxww8dk3i9agg97"; depends=[colourpicker data_table dplyr GGally ggplot2 gridExtra KernSmooth matrixStats mgcv miniUI mvnfast plotly plyr qgam rgl rstudioapi shiny viridis]; }; - mgcv = derive2 { name="mgcv"; version="1.8-24"; sha256="15b76m1f0hz8dbmj9shqvslihdx5b7c48vck9grj5xs1z2y45r9c"; depends=[Matrix nlme]; }; + mgcv = derive2 { name="mgcv"; version="1.8-25"; sha256="1y2rq6v45pr2wcxihhgmingcdvcsilim2cvskrlb7k2n00qg6v2q"; depends=[Matrix nlme]; }; mglR = derive2 { name="mglR"; version="0.1.0"; sha256="1b7nd913d4a1szgw2qnhlnjqhfxr95xag6jwjcb2wnnxd12lib7n"; depends=[biomaRt dplyr gdata ggplot2 gplots magrittr stringr]; }; mglmn = derive2 { name="mglmn"; version="0.0.2"; sha256="1ijkmr85s4yya0hfwcyqqskbprnkcbq8sc9c889i0gy0543fgqz4"; depends=[mvabund snowfall]; }; - mgm = derive2 { name="mgm"; version="1.2-3"; sha256="066k5z99dssp9w5iav68mka68li1r7f5x2qbp21gnc89syrsqwnw"; depends=[glmnet gtools Hmisc matrixcalc qgraph stringr]; }; + mgm = derive2 { name="mgm"; version="1.2-4"; sha256="0fyg9dxvrl3biamqc908z1vc7pji1n4l2bwxjfdkwjb5cf6snd3f"; depends=[glmnet gtools Hmisc matrixcalc qgraph stringr]; }; mgpd = derive2 { name="mgpd"; version="1.99"; sha256="0cxpgza9i0hjm5w1i5crzlgh740v143120zwjn95cav8pk8n2wyb"; depends=[corpcor evd fields numDeriv]; }; mgraph = derive2 { name="mgraph"; version="1.03"; sha256="0av2c0jvqsdfb3i0s0498wcms0n2mm0z3nnl98mx2fy7wz34z8b2"; depends=[rgdal]; }; mgsub = derive2 { name="mgsub"; version="1.5.0"; sha256="03w40vs3vfyrksnzbawyvp02kwrmn7cqhlv6xhfzfbh8jmz55wvr"; depends=[]; }; @@ -8493,6 +8873,7 @@ in with self; { mhsmm = derive2 { name="mhsmm"; version="0.4.16"; sha256="009dj0zkj1zry7jr9hf4cknb686z50a2l967if64xm0dvjmp7dgs"; depends=[mvtnorm]; }; mht = derive2 { name="mht"; version="3.1.2"; sha256="01zcaf9k0qayzm8dn5dvnm5n3qgqpj8r96qhqaa5vbjcr6ci2x2r"; depends=[glmnet Matrix]; }; mhtboot = derive2 { name="mhtboot"; version="1.3.3"; sha256="1z0p8ny9lpnrshgas7cad2lv7j0blw0n6ihiimw600n70h73jwrn"; depends=[ggplot2 reshape2]; }; + mhurdle = derive2 { name="mhurdle"; version="1.1-8"; sha256="0nnzhcp9ghx2ifaj8lvhvv1acb3dpwi8m9n1al8zjvfg35wmxwwm"; depends=[Formula maxLik survival texreg truncreg]; }; mi = derive2 { name="mi"; version="1.0"; sha256="1h47k5mpbvhid83277dvvj2di493bgzz9iarpyv3r30y219l7x1l"; depends=[arm Matrix]; }; miCoPTCM = derive2 { name="miCoPTCM"; version="1.0"; sha256="1lmf6zahfp59ylhdp2cbr7y3vayhim72zazimg4qfld4r9d6kygc"; depends=[distr MASS nleqslv survival]; }; miLineage = derive2 { name="miLineage"; version="2.1"; sha256="0660vk44ywmj0q2cw7pa2z1r039ncw693dnz7zlgc0ipwak3b0ry"; depends=[data_table geepack MASS]; }; @@ -8504,24 +8885,24 @@ in with self; { micEconCES = derive2 { name="micEconCES"; version="0.9-8"; sha256="06g6z8hf7y9d942w6gya0fd5aidzfjkx3280gjygdlwpv7nlpqzv"; depends=[car DEoptim micEcon minpack_lm miscTools systemfit]; }; micEconIndex = derive2 { name="micEconIndex"; version="0.1-6"; sha256="1ihly6qpyg1pms4nkvs6khxxqwr3fwg57i8pg0yhyy1apqxyj2xl"; depends=[miscTools]; }; micEconSNQP = derive2 { name="micEconSNQP"; version="0.6-6"; sha256="1n3pxapc90iz1w3plaqflayd0b1jqd65yw5nbbm9xz0ih132dby9"; depends=[MASS miscTools systemfit]; }; - mice = derive2 { name="mice"; version="3.1.0"; sha256="0xpn215yfzib4hw09cwilnyg9zbvq460njavfvm84mvgwbm25byi"; depends=[broom dplyr lattice MASS mitml nnet Rcpp rlang rpart survival]; }; + mice = derive2 { name="mice"; version="3.3.0"; sha256="1p0ipbqk5aqdi7iikw3qrjyvdi9sdhpnw1h5mwakwvv0yl0pzbyx"; depends=[broom dplyr lattice MASS mitml nnet Rcpp rlang rpart survival]; }; miceExt = derive2 { name="miceExt"; version="1.1.0"; sha256="07xj9f5w0kh4d1yj8mx1jydvhd0vwpvvrb6h67xz5gb1ban4k6c6"; depends=[mice RANN RANN_L1]; }; miceFast = derive2 { name="miceFast"; version="0.2.3"; sha256="0ngb2qs71x0i8ffyb1qlbz2wk6c87m1r74l547c5pc9agnc227m0"; depends=[Rcpp RcppArmadillo]; }; - miceMNAR = derive2 { name="miceMNAR"; version="1.0.1"; sha256="1f9cikqcyj5hh8ray2bx8yhhvv378vsk5d6k7hl44c54qgna61cf"; depends=[GJRM mice mvtnorm pbivnorm sampleSelection]; }; - miceadds = derive2 { name="miceadds"; version="2.13-63"; sha256="1a4d0bvvc2w9d6zp8pxrcgsn8jrydbkl5wwafm6zak54z6rsipj4"; depends=[CDM coda lme4 MASS mice mitools mvtnorm Rcpp RcppArmadillo sirt TAM]; }; - micemd = derive2 { name="micemd"; version="1.2.0"; sha256="0l4qzhkxy43xwgfqp2c638fimixdrm94hgiabfds3sc1vbxma4r8"; depends=[abind digest jomo lme4 MASS Matrix mice mvmeta mvtnorm nlme]; }; + miceMNAR = derive2 { name="miceMNAR"; version="1.0.2"; sha256="1s607icaf3c25mn8xdi3zkzmm8m7qd9a6vjdlz5j7ig2gc9f2y2d"; depends=[GJRM mice mvtnorm pbivnorm sampleSelection]; }; + miceadds = derive2 { name="miceadds"; version="2.15-22"; sha256="0069qijlk1nvk1rgm5ki5d3914sgxszk1d9hlnpipq0qwrn99kmy"; depends=[CDM coda lme4 MASS mice mitools mvtnorm Rcpp RcppArmadillo sirt TAM]; }; + micemd = derive2 { name="micemd"; version="1.4.0"; sha256="0annxirq2klldbx5fkfkzmf2gqy7zk1mpwmyhqr8halagmwa12k6"; depends=[abind digest jomo lme4 MASS Matrix mice mvmeta mvtnorm nlme]; }; micompr = derive2 { name="micompr"; version="1.1.0"; sha256="0qsxs35mmqx8hpszcb1z87xczh0vh0m0plqrj22af5mjjvif76n9"; depends=[]; }; microPop = derive2 { name="microPop"; version="1.4"; sha256="0dfqn7g445w4nydklvsq5vlkiin6kcz8kkazj7jfbm98ikdywzm8"; depends=[deSolve]; }; microbats = derive2 { name="microbats"; version="0.1-1"; sha256="1mahvblaiwg1xk2s34wd1ic8ddc9lh6g0azik2pd97bsf0krkyw8"; depends=[]; }; - microbenchmark = derive2 { name="microbenchmark"; version="1.4-4"; sha256="0fv2w2vsiz18imf4115nd9chhmf275w2mb49pn7pkxi6z3bamc9c"; depends=[]; }; + microbenchmark = derive2 { name="microbenchmark"; version="1.4-6"; sha256="1sn1fxgzakm5iqbgc35g3k4yi0iqrkmwz33cvdrphrzh1lxnmi3s"; depends=[]; }; microclass = derive2 { name="microclass"; version="1.1"; sha256="0hl2s4135k187f0vqmj9snvmnwa5k9fg8ahivfs7ciknrcxfv3nk"; depends=[microcontax microseq Rcpp RcppEigen RcppParallel]; }; microcontax = derive2 { name="microcontax"; version="1.0"; sha256="0l5mfgda5xagjbh9bwv328k3m7kgggdm90rc8fr1ic59hvg56f3g"; depends=[microseq]; }; - microdemic = derive2 { name="microdemic"; version="0.3.0"; sha256="1hrl458jwrgjm7ds4scmicf39ssw1gbjxqaq95lhlwi9n0prd7jn"; depends=[crul data_table jsonlite tibble]; }; + microdemic = derive2 { name="microdemic"; version="0.4.0"; sha256="0i4pkrw02ad8ssvryndf7pxgk5wcyn4126yvl28fxk38249kvc9v"; depends=[crul data_table jsonlite tibble]; }; micromap = derive2 { name="micromap"; version="1.9.3"; sha256="1iciwy0kcg4qa0xc4gkqcilq33ac1s184vw13cbbkv0d1b5cgkgv"; depends=[ggplot2 maptools RColorBrewer rgdal sp]; }; micromapST = derive2 { name="micromapST"; version="1.1.1"; sha256="15ch132x3wnpf7rmy25nah7iyfxfk90p7lvavqjhrnavhjsfxbxx"; depends=[labeling RColorBrewer stringr]; }; micropan = derive2 { name="micropan"; version="1.2"; sha256="1b3hd5c6l9njns372zhqfryibrpqmrjxmc1p5gzdwm7450cs7qky"; depends=[BH igraph microseq Rcpp]; }; - microplot = derive2 { name="microplot"; version="1.0-39"; sha256="191rgmcq405c91dv0zk7in2r71n8d1m04w624950ykq6qhdjpmpp"; depends=[cowplot ggplot2 HH Hmisc htmltools lattice ReporteRs]; }; - microsamplingDesign = derive2 { name="microsamplingDesign"; version="1.0.2"; sha256="1wddf09p803hi28kzn6sq86zhgldxi34rrj7c0bpzy476abnp45s"; depends=[abind deSolve devtools ggplot2 gridExtra gtools knitr MASS matrixcalc matrixStats plyr Rcpp RcppArmadillo readr reshape2 shiny stringr]; }; + microplot = derive2 { name="microplot"; version="1.0-42"; sha256="062dd4k6ryyl44lwbc2qgdsfcs1fiv9j2n6lx9driw6vng533b6q"; depends=[cowplot flextable ggplot2 HH Hmisc htmltools lattice officer]; }; + microsamplingDesign = derive2 { name="microsamplingDesign"; version="1.0.5"; sha256="0dybi3l1cyndn72h7dic2n8ll8xnkd837pyvmqkcivckhsl43p9w"; depends=[abind deSolve devtools ggplot2 gridExtra gtools knitr MASS matrixcalc matrixStats plyr Rcpp RcppArmadillo readr reshape2 shiny stringr]; }; microseq = derive2 { name="microseq"; version="1.2.2"; sha256="1h828iviraqrm43lhd0s3r7rdlakc6yfc6ngrcrkacpflfcmx3c7"; depends=[Rcpp]; }; microsynth = derive2 { name="microsynth"; version="1.0.9"; sha256="06k7lag0vlzhrq5x6h7m8q9n209hfal3dzzmpjgxb6i9xdigkr6h"; depends=[boot kernlab LowRankQP MASS nleqslv pracma survey]; }; midas = derive2 { name="midas"; version="1.0.1"; sha256="1alqxk23651jnkg0xn4rpvk71z5rhvx3y0wjrgkw2qw95s7jjn72"; depends=[shiny xml2]; }; @@ -8533,9 +8914,9 @@ in with self; { migui = derive2 { name="migui"; version="1.1"; sha256="1qchjsc7ff2b6s9w6ncj9knjv6pyp90jd4jxljn2rr1ix1gc45za"; depends=[arm gWidgets2 mi]; }; miic = derive2 { name="miic"; version="1.0.3"; sha256="088szscn9v9279w86mypxphp3avv17iijvcvlckx3h1ka75lkx27"; depends=[bnlearn igraph MASS ppcor Rcpp]; }; milr = derive2 { name="milr"; version="0.3.0"; sha256="0z4d22fd6gd3zbi973vws9jqyh4c4m4i4ajcpxv934vxmbj0cma9"; depends=[glmnet numDeriv pipeR Rcpp RcppArmadillo RcppParallel]; }; - mime = derive2 { name="mime"; version="0.5"; sha256="0i91m3ivaja1k33jwcvz16pfjypkci27awm8glil7sxhmwaj3izw"; depends=[]; }; + mime = derive2 { name="mime"; version="0.6"; sha256="00f4gw4sg1kn03s67gficxgb7a7fb6pwhlvrxrml05q1mc2vcxa7"; depends=[]; }; minPtest = derive2 { name="minPtest"; version="1.7"; sha256="088kckpbfy2yp0pk3zrixrimywrvkaib5ywa7fkr5phnzlsl80sv"; depends=[Epi scrime]; }; - mindr = derive2 { name="mindr"; version="1.1.0"; sha256="102r7m6jiadgmkw4w7535ba2qfxknj00y4b9hhawcjqm5v67jipz"; depends=[htmlwidgets]; }; + mindr = derive2 { name="mindr"; version="1.1.5"; sha256="02yszk13h5mm2wyx81byij152r8lj5j7r65icq3cl5skxygl43y7"; depends=[htmlwidgets]; }; mineCitrus = derive2 { name="mineCitrus"; version="1.0.0"; sha256="031nfhrsc5rlqls3vyrk18lx0pd4ssdk96cmfr4ifaciz0rgv8h2"; depends=[ggplot2]; }; minerva = derive2 { name="minerva"; version="1.4.7"; sha256="19snlbnk4y0lj7kfypa2g1d1s7bl3xkrxabn8p15hlwwcfb0x7vm"; depends=[]; }; miniCRAN = derive2 { name="miniCRAN"; version="0.2.11"; sha256="1ffc367ipcxyk2a8f2y46xa01rbr5254cryf1qzzfflb3xj8n6pa"; depends=[httr igraph XML]; }; @@ -8551,9 +8932,9 @@ in with self; { minque = derive2 { name="minque"; version="1.1"; sha256="1hx4j38213hs8lssf9kj5s423imk7dzv60mdbzrpbp7la7jk2n57"; depends=[klaR Matrix]; }; minval = derive2 { name="minval"; version="0.8-1"; sha256="11sr69hmqnh5g2zbfajy3wqc57759basky1w72dnrd38rq50llxs"; depends=[]; }; minxent = derive2 { name="minxent"; version="0.01"; sha256="1a0kak4ff1mnpvc9arr3sihp4adialnxxyaacdgmwpw61wgcir7h"; depends=[]; }; - mipfp = derive2 { name="mipfp"; version="3.2"; sha256="1mds51vkqs2jc5kvxhzh2dmazxgbc14ahg1lxs9mn82my2p743f8"; depends=[cmm numDeriv Rsolnp]; }; - mirt = derive2 { name="mirt"; version="1.28"; sha256="1ykki146wgdb0smdly0b2hqzvk7b31xmd1kgw69505mbm49yhzvh"; depends=[dcurver Deriv GPArotation lattice mgcv Rcpp RcppArmadillo vegan]; }; - mirtCAT = derive2 { name="mirtCAT"; version="1.7"; sha256="038jp680hn17q8hcz346j4i0p913h7gbkqfswn0ygf1kwgsz1mpa"; depends=[lattice lpSolve markdown mirt pbapply Rcpp RcppArmadillo shiny]; }; + mipfp = derive2 { name="mipfp"; version="3.2.1"; sha256="1gxazpg81vj5dywpb6jb29188jw28qil6pfygawa7znnjn3k5ca6"; depends=[cmm numDeriv Rsolnp]; }; + mirt = derive2 { name="mirt"; version="1.29"; sha256="0rmnzs39x4b6v5sb8v23cxnsndnck4mb9757987r8wdnhbdx0hkr"; depends=[dcurver Deriv GPArotation lattice mgcv Rcpp RcppArmadillo vegan]; }; + mirtCAT = derive2 { name="mirtCAT"; version="1.8"; sha256="1syv0j4gcdx5860kxshmr0m2d1klmxfi4bwcsc7lc5ss5kw63yi1"; depends=[lattice lpSolve markdown mirt pbapply Rcpp RcppArmadillo shiny]; }; misc3d = derive2 { name="misc3d"; version="0.8-4"; sha256="0qjzpw3h09qi2gfz52b7nhzd95p7yyxsd03fldc9wzzn6wi3vpkm"; depends=[]; }; miscF = derive2 { name="miscF"; version="0.1-4"; sha256="1kvkbvrmaqclwdfghkrsmnzb6xbi97icay2wwb7k5m34xhx4ha82"; depends=[MASS MCMCpack mvtnorm R2jags]; }; miscFuncs = derive2 { name="miscFuncs"; version="1.2-10"; sha256="1kqya581n76ff9avhj6xm6nwsbw7zlm4mwy0vyvdlqlf7c381qq0"; depends=[mvtnorm roxygen2]; }; @@ -8570,21 +8951,21 @@ in with self; { missRanger = derive2 { name="missRanger"; version="1.0.3"; sha256="00gcnpvvy65v6k5qjk6xavdis02l8s9a56vwi39kw0rw8yhkla73"; depends=[FNN ranger]; }; mistat = derive2 { name="mistat"; version="1.0-5"; sha256="1vyx918b7iv1wcnk23bnlxljwy0hglpdx5drhrs5qcd45f6jrghc"; depends=[]; }; mistral = derive2 { name="mistral"; version="2.1.0"; sha256="1cr79p8q82lpj9d0y6q24xmfkxmnlqv8ivkd0baj7fxfb1nb8sak"; depends=[DiceKriging doParallel e1071 emoa foreach ggplot2 iterators Matrix mvtnorm quadprog]; }; - mitml = derive2 { name="mitml"; version="0.3-5"; sha256="1s888r9y2ri39b48h1iypps6lddqkqv3g31l2sjmi2pvyccfpkwb"; depends=[haven jomo pan]; }; + mitml = derive2 { name="mitml"; version="0.3-6"; sha256="1pkqv4qazih3byws5z6629pp232n8ra56lip7502727b0b4bsndw"; depends=[haven jomo pan]; }; mitools = derive2 { name="mitools"; version="2.3"; sha256="0w76zcl8mfgd7d4njhh0k473hagf9ndcadnnjd35c94ym98jja33"; depends=[]; }; mix = derive2 { name="mix"; version="1.0-10"; sha256="0z16ddbh79kqxi64bl1h2sd8anpgc48n9d1nyr2zlln39nhv8w8g"; depends=[]; }; mixAK = derive2 { name="mixAK"; version="5.1"; sha256="0i9gp66d1mzskiif0bk0w88cinc923fsj4vi7pv0im2cwmxksiiq"; depends=[coda colorspace fastGHQuad lme4 mnormt]; }; mixEMM = derive2 { name="mixEMM"; version="1.0"; sha256="0344ay1avi37kvh5w9bknayx67yh7rflj6zhw68d2888v7cbghjy"; depends=[]; }; - mixKernel = derive2 { name="mixKernel"; version="0.1"; sha256="0p0m081ivpc22z3p8308z12fcdjnid86niwk4i97dvz12dr8v9ws"; depends=[corrplot ggplot2 LDRTools mixOmics phyloseq psych quadprog]; }; + mixKernel = derive2 { name="mixKernel"; version="0.2"; sha256="0jhgyipy4635inzm0lsbi8inlbiahyfffn2ccnhyil6kaw3ky2pr"; depends=[corrplot ggplot2 LDRTools Matrix mixOmics phyloseq psych quadprog vegan]; }; mixOmics = derive2 { name="mixOmics"; version="6.3.2"; sha256="1lqhrgsfdlv1ji965zf9ndg6ngylbmqahcslwirwd5vrjvlbzjb2"; depends=[corpcor dplyr ellipse ggplot2 gridExtra igraph lattice MASS matrixStats rARPACK RColorBrewer reshape2 rgl tidyr]; }; mixPHM = derive2 { name="mixPHM"; version="0.7-2"; sha256="1wvkdb9zj2j8dpppnyins05rg877zbydqsl3qaan62wznkknxcac"; depends=[lattice survival]; }; mixR = derive2 { name="mixR"; version="0.1.1"; sha256="1xd3v5rk59380zh7r6l5blmcy4gib9xp44j5dcrk6ivs6fgycsxh"; depends=[ggplot2 Rcpp]; }; mixRasch = derive2 { name="mixRasch"; version="1.1"; sha256="1r067pv7b54y1bz8p496wxv4by96dxfi2n1c99gziqf5ramx3qzp"; depends=[]; }; - mixcat = derive2 { name="mixcat"; version="1.0-3"; sha256="0xszngygd3yj61pvv6jrrb5j0sxgpxzhlic69xrd5mv5iyw0cmxd"; depends=[statmod]; }; + mixchar = derive2 { name="mixchar"; version="0.1.0"; sha256="1az2gggwipkzg86pvn9w2csgfgrpdc88kca51f5qcw0zk4wx5hlx"; depends=[minpack_lm nloptr tmvtnorm zoo]; }; mixdir = derive2 { name="mixdir"; version="0.1.0"; sha256="0kr82g7s9vp3i1vyqfpn30avdxg86xh0hgngbqmm5l2brd5sa4wx"; depends=[extraDistr Rcpp]; }; mixdist = derive2 { name="mixdist"; version="0.5-5"; sha256="1wchhysd33xz395hq4wgd3zv1qc92pbiqxqd7g2v6m1pb0j8ma9g"; depends=[]; }; mixedMem = derive2 { name="mixedMem"; version="1.1.0"; sha256="0j8w3qfhanyrkkxipdxfdajv15qba8r2rm06iiv3kywficzgkxgv"; depends=[BH gtools Rcpp RcppArmadillo]; }; - mixedsde = derive2 { name="mixedsde"; version="4.0"; sha256="1hryscff4i4ayqxv9imnx4g56497s1s95fzqv8wkwcpfcqi20bqf"; depends=[MASS moments plot3D sde]; }; + mixedsde = derive2 { name="mixedsde"; version="5.0"; sha256="0ss1ng4nx91gxj85wxxfyh9ljxsj3ag6lsj1a5d2815p9jzl7dsv"; depends=[MASS moments plot3D sde]; }; mixexp = derive2 { name="mixexp"; version="1.2.5"; sha256="0nbf10xhrr51rb1b2apcj4p3ci8xbi7flgz500ar3mxh8h8l74sq"; depends=[daewr gdata lattice]; }; mixlink = derive2 { name="mixlink"; version="0.1.5"; sha256="0ywgrcplhspc0x5fniw52xqz20y7j9mwgy4ky8lv3vii659mr52m"; depends=[mvtnorm numDeriv Rcpp RcppGSL]; }; mixlm = derive2 { name="mixlm"; version="1.2.3"; sha256="0i7nrn31yaicdpwfssnid1x8w51iv17lcl96zfr1pgrf97d7gkqd"; depends=[car leaps multcomp pls pracma]; }; @@ -8597,15 +8978,15 @@ in with self; { mixtools = derive2 { name="mixtools"; version="1.1.0"; sha256="13wdm0xs5bakhpa8ypg6lvhjaqkxyabwz4glxdwn0jwdvkcdhgsl"; depends=[MASS segmented survival]; }; mixtox = derive2 { name="mixtox"; version="1.3.2"; sha256="0mdnp1yrcxvan5l7jj91s41vq5y1kdnkhhinqrklmg4ph5f29dmq"; depends=[minpack_lm]; }; mixture = derive2 { name="mixture"; version="1.5"; sha256="1ahr8jw93xnd5hmy3h4sr209ql7gmkwbvnnfmiplbpc17czqgcn4"; depends=[]; }; - mize = derive2 { name="mize"; version="0.1.1"; sha256="18mnpwwbwlyx0ixsjqai28ahp4g0wncv8c5qwy17xq2zbhwlq3jh"; depends=[]; }; + mize = derive2 { name="mize"; version="0.2.0"; sha256="13l6f0i6k2y2cqad80zi35vqpkd0p8xl0hmf8djrsk1nmjqap1gc"; depends=[]; }; mizer = derive2 { name="mizer"; version="1.0"; sha256="0qsf3wd8ipql344i8brv1d7qbr9g5y0qhh00lxj9n8sgjg52x7a5"; depends=[deSolve ggplot2 plyr progress Rcpp reshape2]; }; mkde = derive2 { name="mkde"; version="0.1"; sha256="04v84arpnmjrkk88ffphnhkz32x7y0dypk75jfmbbgcgv59xlglv"; depends=[raster Rcpp sp]; }; - mkin = derive2 { name="mkin"; version="0.9.47.1"; sha256="1cz6f9122im594dvqdmdm9yjlnmwzrx2ka63dgj0zf1ysqzf0872"; depends=[deSolve FME inline minpack_lm R6 rootSolve]; }; + mkin = derive2 { name="mkin"; version="0.9.47.5"; sha256="1cnzvq3wbkyzxajwk8h7pxyabfw0dbiv6dwga337ssf643rq9a8v"; depends=[deSolve FME inline minpack_lm R6 rootSolve]; }; mknapsack = derive2 { name="mknapsack"; version="0.1.0"; sha256="1kzmx7d512681a4hjirfgcd7a8rvndb4da66p16gms5nnxzsby9c"; depends=[assertthat data_table lpSolve]; }; mkssd = derive2 { name="mkssd"; version="1.1"; sha256="1qqzy6fn6sc3lxahc19hzzf1hzxsyvxqi7npynw0vkknlrvh2ijp"; depends=[]; }; mlDNA = derive2 { name="mlDNA"; version="1.1"; sha256="0d9lydiwar98hin26slnym4svn0g1xmyn212vvzsx9lzlvs5a9k4"; depends=[e1071 igraph pROC randomForest ROCR rsgcc snowfall]; }; mlPhaser = derive2 { name="mlPhaser"; version="0.01"; sha256="1s2mqlnbcjdkx0ghvr2sw9rzggqa4jy2vzi9vbyqkh6795lgck6n"; depends=[]; }; - mlVAR = derive2 { name="mlVAR"; version="0.4"; sha256="08iaq6wq0ngd60nhmlj8c0x8r1fal1zfv2zpd6ll54szcvdbxahr"; depends=[abind arm clusterGeneration corpcor dplyr lme4 MplusAutomation mvtnorm plyr qgraph]; }; + mlVAR = derive2 { name="mlVAR"; version="0.4.1"; sha256="04ginifm625k7qy5s2s7rwqa5gwi8frrd2vs332jiw2sgpbi45ig"; depends=[abind arm clusterGeneration corpcor dplyr graphicalVAR lme4 MplusAutomation mvtnorm plyr qgraph]; }; mlapi = derive2 { name="mlapi"; version="0.1.0"; sha256="023vk5bp8cjcq88sapkl87kdxr92bay1dyxl6xirnyj699pyj51k"; depends=[Matrix R6]; }; mlbench = derive2 { name="mlbench"; version="2.1-1"; sha256="1rp035qxfgh5ail92zjh9jh57dj0b8babw3wsg29v8ricpal30bl"; depends=[]; }; mlbgameday = derive2 { name="mlbgameday"; version="0.1.2"; sha256="03mz88y29wkn3510p8kzhapx0gj0mkqf0bgcjc0jpph2r1020c9a"; depends=[DBI doParallel dplyr foreach iterators magrittr purrr stringr tidyr xml2]; }; @@ -8618,24 +8999,24 @@ in with self; { mlegp = derive2 { name="mlegp"; version="3.1.7"; sha256="1q0mxvr23qcxvf8k2cgs4m8yfp1gbkmprp964w8viy30japmx16l"; depends=[]; }; mleur = derive2 { name="mleur"; version="1.0-6"; sha256="0mddphq3b6y2jaafaa9y41842kcaqdl3dh7j4pva55q2vcjcclj7"; depends=[fGarch lattice stabledist urca]; }; mlf = derive2 { name="mlf"; version="1.2.1"; sha256="09ihnibpknpp26hdlbxyr99yz7z0n8qpsjs5aq3zngng0yh3wdn9"; depends=[]; }; + mlflow = derive2 { name="mlflow"; version="0.7.0"; sha256="1dx6g4656y6z90dmsfpb0l9wb1yf8g40m62x8fwny51ld3d3cfxm"; depends=[aws_s3 forge fs git2r httpuv httr jsonlite openssl packrat processx pryr purrr reticulate rlang swagger withr xml2 yaml]; }; mlgt = derive2 { name="mlgt"; version="0.16"; sha256="1nvdq6mvgr39ikkf73aggsb6pmbw132injj8fdkr8hgcmwm6lgd9"; depends=[seqinr]; }; mlica2 = derive2 { name="mlica2"; version="2.1"; sha256="0c3m1zd9x99n6lw12hfzmd59355z51xa8rhg1h7qwfn9p86r826f"; depends=[]; }; mljar = derive2 { name="mljar"; version="0.1.1"; sha256="1mw45aqjwklsnrfwf8656jf30miyrlxpz87z97nkv9i135yhwfx3"; depends=[httr jsonlite readr]; }; mlmRev = derive2 { name="mlmRev"; version="1.0-6"; sha256="0mvmahnbbp478xwldj4wlsjib4v4afhs07643gxgcqpi56zbd5h7"; depends=[lme4]; }; mlma = derive2 { name="mlma"; version="4.0-1"; sha256="0pk2h4m74r95dfkqzliixi6z1rwdfc6gbz8c3162y22m919f00vc"; depends=[car gplots lme4]; }; mlmc = derive2 { name="mlmc"; version="1.0.0"; sha256="01h7w0ajyg3bccynlpbi3yjpy089wczbfbajpg6yw5v4dppw7k7a"; depends=[ggplot2 Rcpp]; }; - mlmm_gwas = derive2 { name="mlmm.gwas"; version="1.0.3"; sha256="0k0q7l0dja6q5jl4p7fd16c95m83db8c7g34lnaymxll824ai1lq"; depends=[coxme Matrix multcomp multcompView sommer]; }; + mlmm_gwas = derive2 { name="mlmm.gwas"; version="1.0.4"; sha256="1m58fp0izp03filb9wzw8fjrgy383p20jpynvgmxngbfp8bvspy6"; depends=[coxme Matrix multcomp multcompView sommer]; }; mlmmm = derive2 { name="mlmmm"; version="0.3-1.2"; sha256="1m5ziiqs3ll1xjm1yf7x4sdc910jypn3kjnbadf95xxkvqmfrsqq"; depends=[]; }; mlogit = derive2 { name="mlogit"; version="0.3-0"; sha256="0frggwb1yzfs229ys60qc4acfnq2zwjr6a1zb4fv07s1zlwrvnf1"; depends=[Formula lmtest MASS maxLik statmod zoo]; }; mlogitBMA = derive2 { name="mlogitBMA"; version="0.1-6"; sha256="1wl8ljh6rr1wx7dxmd1rq5wjbpz3426z8dpg7pkf1x9wr94a2q25"; depends=[abind BMA maxLik]; }; - mlr = derive2 { name="mlr"; version="2.12.1"; sha256="0b68pgx55f19i3pnci1n87cq2a7kfs6s2248zs1vg4xl5sw9ifww"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival XML]; }; - mlrCPO = derive2 { name="mlrCPO"; version="0.3.4"; sha256="126kbfgcaqlvrpmz7v1l391x4v8sfzw7ccimz341im6n9ygp43rp"; depends=[backports BBmisc checkmate mlr ParamHelpers stringi]; }; + mlr = derive2 { name="mlr"; version="2.13"; sha256="07816gbswlv56qacf2byp5a5yg4hicx4kya49h9fmhfxmkkrnwp8"; depends=[backports BBmisc checkmate data_table ggplot2 parallelMap ParamHelpers stringi survival XML]; }; + mlrCPO = derive2 { name="mlrCPO"; version="0.3.4-1"; sha256="1kq8y24vvzxp1jbn52cddh0gq183pbfqs0gpi17my5xh892aszi9"; depends=[backports BBmisc checkmate mlr ParamHelpers stringi]; }; mlrMBO = derive2 { name="mlrMBO"; version="1.1.2"; sha256="1ziyiycgwr4vgilji8dkf1c0kyqjnbmqi3qj35q3si2xbnmcm14f"; depends=[backports BBmisc checkmate data_table lhs mlr parallelMap ParamHelpers smoof]; }; mlsjunkgen = derive2 { name="mlsjunkgen"; version="0.1.1"; sha256="109ag52x4y3rzx8yccilrnl24mz4ximzx6v4lrbak7dpiclqrw7a"; depends=[]; }; - mlt = derive2 { name="mlt"; version="1.0-2"; sha256="0yc1dij3q6nk15259mvl5bhnm9b70ix8nq5lniq40j1arh5v9nq0"; depends=[alabama basefun BB coneproj numDeriv sandwich survival variables]; }; - mlt_docreg = derive2 { name="mlt.docreg"; version="1.0-1"; sha256="140bi0kjz5m7amwdxm2mpqn04i5wb1yjviwv34f1qjpzi4walml3"; depends=[mlt numDeriv]; }; + mlt = derive2 { name="mlt"; version="1.0-3"; sha256="067j6gp5xh30ad46lp7x2n7kd8asbnchzlvsdgm8gq8gkd19icxx"; depends=[alabama basefun BB coneproj numDeriv sandwich survival variables]; }; + mlt_docreg = derive2 { name="mlt.docreg"; version="1.0-2"; sha256="1dk27iq7ix7j06m34c8wi9433f7kd36499x24bswy89y10lqqsn9"; depends=[mlt numDeriv]; }; mltools = derive2 { name="mltools"; version="0.3.5"; sha256="045v28w7vz1zjxim8vfc6ncvg2mavr1q332x0hzlqpfzrk7gz4vh"; depends=[data_table Matrix]; }; - mlvocab = derive2 { name="mlvocab"; version="0.0.1"; sha256="0lv9aqrwm00jdklig80yi5lxj87sh6ysg7qkg0kf1nv05lkvrpb0"; depends=[digest Matrix Rcpp sparsepp]; }; mlxR = derive2 { name="mlxR"; version="3.3.0"; sha256="0qbhmxmsyqfc2csk96qwizpjj7yk35r85rr5xaqkyr72mjn2m3gh"; depends=[ggplot2 Rcpp XML]; }; mma = derive2 { name="mma"; version="6.1-0"; sha256="1rrnm7szlaly8klqgi8wdh5qvfx4kx5bkl1q2y9y6zjpxmb4zvi6"; depends=[car doParallel foreach gbm gplots plotrix survival]; }; mmabig = derive2 { name="mmabig"; version="1.0-0"; sha256="1srrfk6dqqfc504w8rhrfag3lzsc55sw3ckkmgph6k8ss99zn285"; depends=[car glmnet gplots mma survival]; }; @@ -8651,7 +9032,7 @@ in with self; { mmm2 = derive2 { name="mmm2"; version="1.2"; sha256="1h9pn5s3jjs4bydrr1qysjb4hv7vs4h3m7mvi22ggs2dzyz3b298"; depends=[gee]; }; mmmgee = derive2 { name="mmmgee"; version="1.12"; sha256="083hv7g2cy2r9qkwc2fihglf4avsl1dsjyy74mj39gk1pss8mh6j"; depends=[Matrix mvtnorm]; }; mmod = derive2 { name="mmod"; version="1.3.3"; sha256="1dz6887mlqbagjj98wcabmxj9hvsz8pgsizy1fqkwjhhs44c62y4"; depends=[adegenet pegas]; }; - mmpf = derive2 { name="mmpf"; version="0.0.4"; sha256="1lskpnhqiimf7ch5xg5f0mpvhxy18a5w9daxpp4133vx1dydm4c2"; depends=[checkmate data_table]; }; + mmpf = derive2 { name="mmpf"; version="0.0.5"; sha256="1w1ll1l7yzwb1wmlrcfpgqyzni7yb20kxy422y867hx2ndxlfwpz"; depends=[checkmate data_table]; }; mmpp = derive2 { name="mmpp"; version="0.6"; sha256="16aypjf4i0ya3qgxqrrg8y0xbnq1pnqky1dpkgln5q494hphyg91"; depends=[]; }; mmppr = derive2 { name="mmppr"; version="0.1"; sha256="0fswkqcw0xkqd9gmqabb61i32zscp5jzfx0z43wq7mrlwynryylv"; depends=[expm reshape2]; }; mmtfa = derive2 { name="mmtfa"; version="0.3"; sha256="0qfszr6f10v27w1pfns78dyarznqryl4m1ppyqap7l8fc12sliky"; depends=[matrixStats mvnfast]; }; @@ -8660,10 +9041,10 @@ in with self; { mnlogit = derive2 { name="mnlogit"; version="1.2.5"; sha256="0vwragk71hisz7dy4h5i6zl9yp6wvzwlnfyw2kprnd94y02laq63"; depends=[Formula lmtest mlogit]; }; mnormpow = derive2 { name="mnormpow"; version="0.1.1"; sha256="0z53vwhkhkkr6zrjhd3yr14mb02vh7lr63frf0ivajndxiap0s9v"; depends=[]; }; mnormt = derive2 { name="mnormt"; version="1.5-5"; sha256="1b34xxrnf35khsx82mhvmk96sgfr2flyasaah7qkb2976pwxay7z"; depends=[]; }; - mnreadR = derive2 { name="mnreadR"; version="2.0.0"; sha256="0m8h4g43iwq2ri6y9xk68g2rrikxngqcpqy6jlva84gsxigbzbql"; depends=[dplyr ggplot2 nlme tibble tidyr]; }; + mnreadR = derive2 { name="mnreadR"; version="2.1.0"; sha256="1299jc72rr8c14kl5510jc5pj2l7l2xwi593a9zg853j4bmx3nim"; depends=[dplyr ggplot2 nlme tibble tidyr]; }; mobForest = derive2 { name="mobForest"; version="1.3.0"; sha256="0gzn3lyi9ph5dcrfbw4xs4rkf5ngf28abf1n8vap96fdhc6nmg88"; depends=[modeltools party sandwich strucchange zoo]; }; mobsim = derive2 { name="mobsim"; version="0.1.0"; sha256="077hw1162giwc90y5dvj9052i5hxdf2ii29m9q8ky028375dsd0f"; depends=[Rcpp sads vegan]; }; - mockery = derive2 { name="mockery"; version="0.4.1"; sha256="1h8976rlwykpqrh2p6x3bcyxdhlhcwsi1wvkdk08k6hynbw877cm"; depends=[testthat]; }; + mockery = derive2 { name="mockery"; version="0.4.1.1"; sha256="1vfmjcjjyw2v5y64hmpfib6v0f6ms4k5ycvc9pmj9l4nkzq2al6b"; depends=[testthat]; }; mockr = derive2 { name="mockr"; version="0.1"; sha256="0340v6189ivlzzriwk7yhf3v2k651x05fd1xrqfxxjgwhysaqj6z"; depends=[lazyeval]; }; mod09nrt = derive2 { name="mod09nrt"; version="0.14"; sha256="1wn1y33bj9r712l0f063j5gcl423anjzmvgfy0ddihcrbpz4l7a0"; depends=[]; }; modEvA = derive2 { name="modEvA"; version="1.3.2"; sha256="0p41fl0k780rx1vmq9laknz01ar6507sj8ss8kphrqkjnymsi2a0"; depends=[]; }; @@ -8678,39 +9059,41 @@ in with self; { modelObj = derive2 { name="modelObj"; version="3.0"; sha256="0wc67zsh26zyr7x9s229g2mppfk6g6z12j74zj2bdhk2m7i2x3zq"; depends=[]; }; modeldb = derive2 { name="modeldb"; version="0.1.0"; sha256="1pb9vnviz0sy9cz2jns34j7fwadi0j250smixr840hjjvvgxyzwf"; depends=[dplyr ggplot2 progress purrr readr rlang tibble tidyr]; }; modelfree = derive2 { name="modelfree"; version="1.1-1"; sha256="0ammka2wxx90z31zfzypw9dk5n118l0vxhykxbx6srfig2vdyn82"; depends=[PolynomF SparseM]; }; + modelgrid = derive2 { name="modelgrid"; version="1.1.0.0"; sha256="0ljqdr479rv0glpf5grmx23f9g6dmc62pps47wdr89ja0iv7abp9"; depends=[caret dplyr ggplot2 lattice magrittr purrr]; }; modelr = derive2 { name="modelr"; version="0.1.2"; sha256="09whg3q5xq6csbqwgwfwav09vda8vgady5j70sk52xcn232k363a"; depends=[broom dplyr magrittr purrr rlang tibble tidyr]; }; - modeltools = derive2 { name="modeltools"; version="0.2-21"; sha256="0ynds453xprxv0jqqzi3blnv5w6vrdww9pvd1sq4lrr5ar3k3cq7"; depends=[]; }; + modeltools = derive2 { name="modeltools"; version="0.2-22"; sha256="1s9lmkac3rl0nknf4wizfhg7ryq7c8yvvyc4z619238br27hhsi5"; depends=[]; }; modelwordcloud = derive2 { name="modelwordcloud"; version="0.1"; sha256="0ardib0h923i7jk8bgcq6pn2zazx9acf9sdggifsk46hdz8hvqnm"; depends=[]; }; - moderndive = derive2 { name="moderndive"; version="0.1.1"; sha256="11xxklaqizlx36nyx3nzj9xkszg99qsmjqmr59z235h4wkrw8xg3"; depends=[assertive broom dplyr formula_tools janitor knitr magrittr rlang stringr tibble]; }; + moderndive = derive2 { name="moderndive"; version="0.2.0"; sha256="165dll1bkjmd949mwy165hrz22ajbkn3ap5l8f8pqwksw78rsgqb"; depends=[assertive broom dplyr formula_tools infer janitor knitr magrittr rlang stringr tibble]; }; modes = derive2 { name="modes"; version="0.7.0"; sha256="185qjrmz2sj0l5931g4d3kx3jpgjn4rf4lln84h6g97prk1ykqmj"; depends=[]; }; modest = derive2 { name="modest"; version="0.3-1"; sha256="07rs014hdcabp2n0gg14pz2gmqgbw38vjv7a80vkzzh3601hxqws"; depends=[knitr rhandsontable shiny shinyBS]; }; modifiedmk = derive2 { name="modifiedmk"; version="1.1.0"; sha256="08nyn1rh28rs9wpz9jvi4pyrhrlh4qaklkx4za0h027lv3086ja3"; depends=[boot]; }; modiscloud = derive2 { name="modiscloud"; version="0.14"; sha256="0vwhfp50yb21xkanvzk983vk0laflv60kj1ybx3fydfljwqx0rwj"; depends=[date raster rgdal sfsmisc sp]; }; modmarg = derive2 { name="modmarg"; version="0.9.2"; sha256="1clyfvn5k87nyh5cj4b0yi2zkavwvnirhlirxkzi8m2qijdl9vgh"; depends=[]; }; + modopt_matlab = derive2 { name="modopt.matlab"; version="1.0-2"; sha256="0g5mswalv4y7p1k3n8a6qf7wb072m4bjq2ml2j83dz2j2bmvygsd"; depends=[ROI ROI_plugin_glpk ROI_plugin_quadprog]; }; moduleColor = derive2 { name="moduleColor"; version="1.08-3"; sha256="183l968l49b7jbmvsjjnmk1xd36cpjkp777c00gw1f73h6nb2na8"; depends=[dynamicTreeCut impute]; }; - modules = derive2 { name="modules"; version="0.6.0"; sha256="0nzypmx8p84dd7pdw7ilrjrc2nji5qzwylb9yn1zmr8wp5lzvidc"; depends=[stringr]; }; + modules = derive2 { name="modules"; version="0.7.0"; sha256="0ww2abbrd4s6qf8hfhpwg92gpyvbsrwjf6l0837x0705d81cmgw3"; depends=[stringr]; }; modygliani = derive2 { name="modygliani"; version="1.0"; sha256="01g96cdm4hgbsh6xsdfjg7vp7zb138sxwgv0msrlm27a6p4fcnlx"; depends=[]; }; moezipfR = derive2 { name="moezipfR"; version="1.0.2"; sha256="0sfl1c7cvm1milcglcvz9lyvgricsdm7shx0jxyn50y7xz0padww"; depends=[tolerance VGAM]; }; mogavs = derive2 { name="mogavs"; version="1.1.0"; sha256="0lhmwdv991bv7j8k066jr7ii94w60ydjpf5pzmv8jlblf3w2pr02"; depends=[cvTools]; }; mokken = derive2 { name="mokken"; version="2.8.11"; sha256="1dypdf5gdz0hr3izafzfknyqx2vbr1z77c4c7vqdygv2wzhwy5i1"; depends=[poLCA]; }; moko = derive2 { name="moko"; version="1.0.1"; sha256="1d1gyv44z8k196hfh8a9iccmlrwb42bj1xzabs07h306gpi9m73d"; depends=[DiceKriging DiceOptim emoa GenSA GPareto mco]; }; - molaR = derive2 { name="molaR"; version="4.3"; sha256="1bzk7k6d1zbi0fhf9xwdg5mv7dcgajjbb6wxafx4nc2fjxhlldzi"; depends=[alphahull rgl Rvcg]; }; + molaR = derive2 { name="molaR"; version="4.4"; sha256="0prd2avg3aj4y8zi7yd2sgcary8igqxrjcp0igail84kpnal53zq"; depends=[alphahull rgl Rvcg]; }; mombf = derive2 { name="mombf"; version="2.1.2"; sha256="1lbg91ih8djxv8brwzwpxwzpbnhl7p3rj585kagykknknq5r6csj"; depends=[mclust mgcv mvtnorm ncvreg survival]; }; momentchi2 = derive2 { name="momentchi2"; version="0.1.5"; sha256="1fv0jmwws4mkl9dsaybfpj29ncvqx2idsijgwz2qjblcg309a6k9"; depends=[]; }; moments = derive2 { name="moments"; version="0.14"; sha256="0f9y58w1hxcz4bqivirx25ywlmc80gbi6dfx5cnhkpdg1pk82fra"; depends=[]; }; momentuHMM = derive2 { name="momentuHMM"; version="1.4.2"; sha256="02ia80h78msgb4c474h47cbd8n0j3bfrjcq4wl2937licdzfl43s"; depends=[argosfilter boot Brobdingnag car CircStats conicfit crawl doParallel dplyr foreach geosphere ggmap ggplot2 gstat LaplacesDemon magrittr MASS mitools moveHMM mvtnorm nleqslv numDeriv prodlim qdapRegex raster Rcpp RcppArmadillo sp survival]; }; momr = derive2 { name="momr"; version="1.1"; sha256="091vzaw8dm29q89lg2iys25rbg2aslgdn9sk06x038nngxdrn95r"; depends=[gplots Hmisc nortest]; }; mondate = derive2 { name="mondate"; version="0.10.01.02"; sha256="18v15y7fkll47q6kg7xzmj5777bz0yw4c7qfiw2bjp0f3b11qrd2"; depends=[]; }; - mongolite = derive2 { name="mongolite"; version="1.6"; sha256="0wam3sbf5p7d5ikvmf0z8cghk2lrw2c3qyh9pbffm62vdbq7wx86"; depends=[jsonlite mime openssl]; }; + mongolite = derive2 { name="mongolite"; version="2.0"; sha256="1icbxsnrah9dxcn1rf678853g8whdj41pj3zwv8kl61vjrg8r6rn"; depends=[jsonlite mime openssl]; }; monitoR = derive2 { name="monitoR"; version="1.0.7"; sha256="1h1g0m1j13mz37xxwck4s7a0bfqvi0nrzfw60j7bkzaah8zxcc9n"; depends=[tuneR]; }; monkeylearn = derive2 { name="monkeylearn"; version="0.2.0"; sha256="18lpfs64h0hy4vkdjlnmxwgagvf54kn8a1c866vv00ckyp85fvn2"; depends=[cowsay digest dplyr httr jsonlite magrittr purrr ratelimitr tibble tidyr]; }; monmlp = derive2 { name="monmlp"; version="1.1.5"; sha256="19cx60csm8mnf6ksg64vlhi8wi1c7bmv9l55y9zmaljblr0kmzxf"; depends=[optimx]; }; monographaR = derive2 { name="monographaR"; version="1.2.0"; sha256="0sis2kw07ifq54w6p56zspmlnvxvq6ajb0sdvc9fk480sfxg9806"; depends=[circular maptools png raster rmarkdown sp]; }; - monomvn = derive2 { name="monomvn"; version="1.9-7"; sha256="1bz967sl6ji84x9v0fypjn75d39naaqgvw31n9lgcd5lyj39hbsk"; depends=[lars MASS mvtnorm pls quadprog]; }; + monomvn = derive2 { name="monomvn"; version="1.9-8"; sha256="1bsn3i0j4mf39cxcyqwb1fgafdyv6bmvsh803d7692h93zc3llqj"; depends=[lars MASS mvtnorm pls quadprog]; }; monoreg = derive2 { name="monoreg"; version="1.2"; sha256="16n622j1j998a5fhn1c1qbzk5bfa5h09d95ry89gsd00p40hqg0a"; depends=[]; }; monotonicity = derive2 { name="monotonicity"; version="1.1"; sha256="06irf6jlmhmj70c45ilf66yy2k81i3rg1qgw9ch08mj1j8ahyx7x"; depends=[lmtest MASS sandwich]; }; monreg = derive2 { name="monreg"; version="0.1.3"; sha256="08rcg2xffa61cgqy8g98b0f7jqhd4yp8nx6g4bq3g722aqx4nfg3"; depends=[]; }; - moonBook = derive2 { name="moonBook"; version="0.1.8"; sha256="1gdzpjc16l2alvf968011njgl8i7fhi2l5v97b47dh4wlnziq68x"; depends=[nortest survival]; }; + moonBook = derive2 { name="moonBook"; version="0.2.3"; sha256="0hys56mwbm776ff7dibi8wzyf69qiais9rs1jazv79lk6h56s9s6"; depends=[magrittr nortest purrr sjmisc stringr survival]; }; moonsun = derive2 { name="moonsun"; version="0.1.3"; sha256="1y8mwxmcy4iz444c2fayyi4i0jk1k561dp6cbjg2b3lmdml0whmi"; depends=[]; }; mopa = derive2 { name="mopa"; version="1.0.1"; sha256="1v876al1afli002v44b4j2acb6n66f0hzz4bmcl60jyny43d1n0c"; depends=[abind dismo e1071 earth gtools lattice PresenceAbsence randomForest ranger raster rpart sampling sp spam spatstat splancs tree]; }; mopsocd = derive2 { name="mopsocd"; version="0.5.1"; sha256="10hssnm1afqmxa9kw6ifqnz3p3yyjrmxgi98zlj31a5g4nis8wb1"; depends=[]; }; @@ -8718,7 +9101,7 @@ in with self; { morpheus = derive2 { name="morpheus"; version="0.2-0"; sha256="07gk05qpabbg96svgnp2m9sw3fxsh2mgfwyda423c03yhxn1pnsm"; depends=[jointDiag MASS pracma]; }; morse = derive2 { name="morse"; version="3.1.1"; sha256="0j0h8jx3mx20dfdzzkn48amq5fc6mdfkb06fznqbyxrahdgwj5wg"; depends=[coda dplyr epitools ggplot2 gridExtra magrittr reshape2 rjags tibble tidyr zoo]; }; mortAAR = derive2 { name="mortAAR"; version="1.0.1"; sha256="1dgxx5sh0nskzbigr8yq389lsnalp45d6m92q6g07jpqm7nzbazd"; depends=[magrittr Rdpack reshape2]; }; - mosaic = derive2 { name="mosaic"; version="1.3.0"; sha256="1iaiddg81b49296jch45m9hlybv6iia5vkl2s6pkzjp2ii5yvf8k"; depends=[broom dplyr ggdendro ggformula ggplot2 glue gridExtra lattice latticeExtra lazyeval MASS Matrix mosaicCore mosaicData readr tidyr]; }; + mosaic = derive2 { name="mosaic"; version="1.4.0"; sha256="10jbrg8kli00kfgbh2f67bymm5cnlancc9dplb1j7fl552yjddn2"; depends=[broom dplyr ggdendro ggformula ggplot2 ggrepel glue gridExtra lattice latticeExtra lazyeval MASS Matrix mosaicCore mosaicData readr tidyr]; }; mosaicCalc = derive2 { name="mosaicCalc"; version="0.5.0"; sha256="05s14rmgi15xcz50hcz7l26l95yx9g4i3kihzh0laz8bpi443i39"; depends=[MASS mosaic mosaicCore]; }; mosaicCore = derive2 { name="mosaicCore"; version="0.6.0"; sha256="1klw97h6lchw1cpcl8s637ikcl428cckmjq0czi7mibh9q9mw72z"; depends=[dplyr lazyeval MASS rlang tidyr]; }; mosaicData = derive2 { name="mosaicData"; version="0.17.0"; sha256="04z0mdm52mykqsxsinhmsihn181zf6cw321gayk2rjp7lj7mwdq9"; depends=[]; }; @@ -8728,16 +9111,17 @@ in with self; { moult = derive2 { name="moult"; version="2.1.0"; sha256="0k0969fwy648x25xw42w5ncimyw2cbq305rzf4m77p3pf0k50m9b"; depends=[Formula Matrix]; }; mountainplot = derive2 { name="mountainplot"; version="1.2"; sha256="1bbgkps1yhfa0lmapqkhhl5mc63p0gzszxw2g910dbi1cjc0pphx"; depends=[lattice]; }; mousetrack = derive2 { name="mousetrack"; version="1.0.0"; sha256="0lf0xh0c3xl27nh5w8wwyrm2jfzfajm2f73xjdgf746dp365qc8n"; depends=[pracma]; }; - mousetrap = derive2 { name="mousetrap"; version="3.1.0"; sha256="1r1cpfn6bcgk66lw0la6r3bsv62yhp2m3jkwn0g8rbwrhp9jyl6p"; depends=[cstab diptest dplyr fastcluster fields ggplot2 magrittr pracma psych RColorBrewer Rcpp scales tidyr]; }; - movMF = derive2 { name="movMF"; version="0.2-2"; sha256="0kk3b16vlr6nbqn9fzgk5pb4nyy9w9b5x7khyvn34b9r0pnqmmds"; depends=[clue skmeans slam]; }; - move = derive2 { name="move"; version="3.0.2"; sha256="0pi59k2kq1z92qgsbbqn1cjx0rbkjzjhaskk76wv95s3078k062d"; depends=[geosphere httr raster Rcpp rgdal sp xml2]; }; + mousetrap = derive2 { name="mousetrap"; version="3.1.1"; sha256="150760bpalssalh2grh4jfpw3vsbysnnfvnvy2xk1yrcn3234ynj"; depends=[cstab diptest dplyr fastcluster fields ggplot2 magrittr pracma psych RColorBrewer Rcpp scales tidyr]; }; + movMF = derive2 { name="movMF"; version="0.2-4"; sha256="0j5gp1l374479lsijw1hz00pxs09zzh7hapljv80lsvr24vfscpa"; depends=[clue skmeans slam]; }; + move = derive2 { name="move"; version="3.1.0"; sha256="0f5h5apwhp2z4ya8mkiflqfp46kmhfdr4zssi3rpkyl615d3dz9z"; depends=[geosphere httr memoise raster Rcpp rgdal sp xml2]; }; moveHMM = derive2 { name="moveHMM"; version="1.6"; sha256="1wz8yg87rxkq70hnahv1jd027938vl9g4wr9zvnq24vwc7hzdafz"; depends=[boot CircStats geosphere ggmap ggplot2 MASS numDeriv Rcpp RcppArmadillo sp]; }; - moveVis = derive2 { name="moveVis"; version="0.9.6"; sha256="15w11zdi2amzvq7xgz5wsf9136s127inc44x8cl3ra7jy2sbgpiy"; depends=[dismo geosphere ggplot2 gridExtra lubridate maptools move pbapply plyr raster rasterVis RCurl RStoolbox simecol sp zoo]; }; + moveVis = derive2 { name="moveVis"; version="0.9.8"; sha256="0dvspbivmw7h9safhwl5cm435617ir9xig07vng57lmiwkjlfm3v"; depends=[dismo geosphere ggplot2 gridExtra lubridate maptools move pbapply plyr raster rasterVis RStoolbox simecol sp zoo]; }; moveWindSpeed = derive2 { name="moveWindSpeed"; version="0.2.1"; sha256="020bl3i0i393dfknix03k8y70fjsf0lbw0mqrnhwsvz8kwrw3hi1"; depends=[move Rcpp]; }; + movecost = derive2 { name="movecost"; version="0.1"; sha256="0h1xc5985r696lvwqncxd6blvzxzrgsw27wcw8cllg92yfzjnwks"; depends=[gdistance raster rgdal rgeos sp]; }; mozzie = derive2 { name="mozzie"; version="0.1.0"; sha256="09dwrv4r0hi19gzi1vpif3q4wlbny9h22430g1hhv0wkqs86mhmw"; depends=[]; }; mp = derive2 { name="mp"; version="0.4.1"; sha256="0awvwqwb25q47j14b450k1k5mh2yzwhn7gizjv5j7lyiamk30iwq"; depends=[Rcpp RcppArmadillo]; }; mpa = derive2 { name="mpa"; version="0.7.3"; sha256="0mhnsbgr77fkn957zfiw8skyvgd084rja1y4wk5zf08q5xjs2zvn"; depends=[network]; }; - mpath = derive2 { name="mpath"; version="0.3-4"; sha256="0qn2nqravnfjjr76p2049z24cwfzy4av8xr2rvpgkan14jcm6xra"; depends=[bst doParallel foreach glmnet MASS numDeriv pscl]; }; + mpath = derive2 { name="mpath"; version="0.3-5"; sha256="1yv4pl6ph3d5cfrg1li5capcsvl3h321s0bvzl6mkcn0vnm23jdm"; depends=[bst doParallel foreach glmnet MASS numDeriv pscl]; }; mpbart = derive2 { name="mpbart"; version="0.2"; sha256="1145n0lxmm0kjm2lc358d79hqws48crj17pjvmchl1pbfd7zi4r8"; depends=[bayesm cvTools mlbench mlogit]; }; mpcv = derive2 { name="mpcv"; version="1.1"; sha256="0vwycspiw9saj811f6alkbijivy7szpahf35bxn2rpn2bdhbn21i"; depends=[lpSolve]; }; mpe = derive2 { name="mpe"; version="1.0"; sha256="17bgdbg1zrf78djd3mwycidwibxvsis7pwkrcynvghcc8l2zfci9"; depends=[mvtnorm]; }; @@ -8752,15 +9136,15 @@ in with self; { mpt = derive2 { name="mpt"; version="0.5-4"; sha256="01akz72z6z5ybzika120v4v6ah13hfynh98rzbmqgbchijxbbkz6"; depends=[]; }; mptools = derive2 { name="mptools"; version="1.0.1"; sha256="1g4fbfwxv9hir0jn22nh9854blgkh0b5jan3lv0888izj4isa1hc"; depends=[animation lattice latticeExtra raster rasterVis sp viridis zoo]; }; mr_raps = derive2 { name="mr.raps"; version="0.2"; sha256="069vyvsdgc5m7n2fd0h7jrllz789zvsxka7h5wiy36dc7lagd6f8"; depends=[nortest]; }; - mrMLM = derive2 { name="mrMLM"; version="3.0"; sha256="174d12dxrsndd8hkc4ivfa5wd7ixh3vkkvd1br5zm5rwxbq3c71l"; depends=[coin data_table doParallel foreach ggplot2 lars MASS ncvreg openxlsx qqman sampling stringr]; }; - mrMLM_GUI = derive2 { name="mrMLM.GUI"; version="3.1"; sha256="17rqky58im1aax29fi3lc6i7kpy3n35ysdhjz9dgmykzhx41xmn2"; depends=[coin data_table doParallel foreach ggplot2 lars MASS mrMLM ncvreg openxlsx qqman sampling shiny shinyjs stringr]; }; + mrMLM = derive2 { name="mrMLM"; version="3.1"; sha256="0mmnqgirbihq25fcy7bqs6qsw9dz6v1mzlm5ccs6pfpi852460c9"; depends=[bigmemory coin data_table doParallel foreach ggplot2 lars MASS ncvreg openxlsx qqman sampling stringr]; }; + mrMLM_GUI = derive2 { name="mrMLM.GUI"; version="3.2"; sha256="0xhbkvq9bd0spnpd8acnmf3spsi1kz43wf2na5b122iv7ppwl3ix"; depends=[bigmemory coin data_table doParallel foreach ggplot2 lars MASS mrMLM ncvreg openxlsx qqman sampling shiny shinyjs stringr]; }; mra = derive2 { name="mra"; version="2.16.11"; sha256="0268msdy4cs2ifpagmwiabi6aav54ckn214ai18aqv2h97hmixw0"; depends=[]; }; mratios = derive2 { name="mratios"; version="1.4.0"; sha256="0pjcwqx3zykpwyykwgqziwignd41sjm2s1blyjwc1lhymis4ldzq"; depends=[mvtnorm]; }; mrbsizeR = derive2 { name="mrbsizeR"; version="1.1.1"; sha256="0a69yyxxf4p84c2sx9kkaxgpfyck88cn0ajlnm64arrr9r99iiir"; depends=[fields maps Rcpp]; }; mrds = derive2 { name="mrds"; version="2.2.0"; sha256="08m5a61rpbw5pv0v0yspihkzihcxazsh6w5kmfvg68s4akjwcnqi"; depends=[mgcv numDeriv optimx Rsolnp]; }; mreg = derive2 { name="mreg"; version="1.1"; sha256="06la0yy2yys161jhlzlcm5lcv0664wm6sa8gjdnpd1s1nx52jkqf"; depends=[]; }; mregions = derive2 { name="mregions"; version="0.1.6"; sha256="0ix77hqcllhcpldchlnvciiflm6ysylynnnqvczpf8vx7gwa3lrk"; depends=[data_table httr jsonlite rappdirs sp tibble wellknown xml2]; }; - mrfDepth = derive2 { name="mrfDepth"; version="1.0.7"; sha256="1v0d1vm7jihg88xd4hwi5j940r5kh74c3nidh6hyvajqq97nidjq"; depends=[abind geometry ggplot2 matrixStats Rcpp RcppArmadillo RcppEigen reshape2]; }; + mrfDepth = derive2 { name="mrfDepth"; version="1.0.10"; sha256="138nsjcxrs3ihzscaw0cv15hkr0xnrjnjlyyf9igpcpg76d5m1bb"; depends=[abind geometry ggplot2 matrixStats Rcpp RcppArmadillo RcppEigen reshape2]; }; mrgsolve = derive2 { name="mrgsolve"; version="0.8.12"; sha256="04k7mj64gqwnvwsshfn4l3iiqfbsy92qil14ysq4ncjj2h40lgkj"; depends=[BH dplyr magrittr Rcpp RcppArmadillo rlang tibble]; }; mri = derive2 { name="mri"; version="0.1.1"; sha256="07lqr9fv0nqd626jpqa6x1qxf85r1j4r5brv760dll1p2kl060gw"; depends=[]; }; mritc = derive2 { name="mritc"; version="0.5-1"; sha256="12sfyw5b1lryczl92xvyvhl37qfx3ybg4y9awsl0b7f51zi0lzy3"; depends=[lattice misc3d oro_nifti]; }; @@ -8774,16 +9158,16 @@ in with self; { msap = derive2 { name="msap"; version="1.1.8"; sha256="0z5lm782jjb9w1h5vgz8bmxjdcrq9zb3xp1w5cb479jjc7krlgg3"; depends=[ade4 ape]; }; mschart = derive2 { name="mschart"; version="0.2.3"; sha256="0lq2hhbwy3hycbvzhrhny7jk5cc4iq89a4mff5q2jjfff13vmm6g"; depends=[cellranger data_table htmltools officer R6 writexl xml2]; }; mscstexta4r = derive2 { name="mscstexta4r"; version="0.1.2"; sha256="1hjcasmn33xav2mw085lcndv0432l6sz327aikf63491wj1sj7mw"; depends=[dplyr httr jsonlite pander stringi]; }; - mscstts = derive2 { name="mscstts"; version="0.2.2"; sha256="1aa8pvg3immcrpr7b6q1lf4nm8gvq9316s28jvzpp2az5hvc1w00"; depends=[httr jsonlite]; }; + mscstts = derive2 { name="mscstts"; version="0.3.0"; sha256="1fl3s5hhqkh7paaafm2dy4066g3p3rqcjmbxlsq4v60l3x448p5p"; depends=[httr jsonlite]; }; mscsweblm4r = derive2 { name="mscsweblm4r"; version="0.1.2"; sha256="031s00wpr9zfjpii56m67q1phn05vqlhb8cfzhyf6fbrxvpb8k7n"; depends=[httr jsonlite pander]; }; msda = derive2 { name="msda"; version="1.0.2"; sha256="05khpa5qasnngn6yvk87gv5262plqpw4knb6hzgy52w401k0y80r"; depends=[MASS Matrix]; }; msde = derive2 { name="msde"; version="1.0.3"; sha256="18l5ca4s1ryyb9i0zsb03klm53f25klwyg171dqkn5z4bqwznp2m"; depends=[Rcpp RcppProgress]; }; mseapca = derive2 { name="mseapca"; version="1.0"; sha256="115njdk8cv55zxd38hq9qaca686ykckni0f3xl8w3bn32gb5g9a7"; depends=[XML]; }; + msgl = derive2 { name="msgl"; version="2.3.7"; sha256="18mcn2b7bk6z85yfmpgv8ics3fr2vbafpkn8fcnsc2amklpaplcd"; depends=[BH Matrix Rcpp RcppArmadillo RcppProgress sglOptim]; }; msgpack = derive2 { name="msgpack"; version="1.0"; sha256="1j1nnca9nm3l1r4wjjlb15zr8p6zw1lcgyj4383ndy156bbh1f5a"; depends=[]; }; msgpackR = derive2 { name="msgpackR"; version="1.1"; sha256="0a6vm4q1zfy8wlvhl9wfy09ig1iag9fvjasz5w9bll7idky4ldx5"; depends=[]; }; msgps = derive2 { name="msgps"; version="1.3"; sha256="0nvxy9a41z5d111gqr1gh521imm795l1li70g1mzrag1gpg810c5"; depends=[]; }; - msgtools = derive2 { name="msgtools"; version="0.2.7"; sha256="1lk4r9gdhlfarl5z6a48aih682q7dvwa6lf31119lljpa5gmi92y"; depends=[devtools digest hunspell poio tibble]; }; - msigdbr = derive2 { name="msigdbr"; version="6.1.1"; sha256="0d8jxkfnlybs17s0qfxr1qcg6r4pp4q6c3srmm2r8zp7ln0qkj8j"; depends=[dplyr magrittr rlang tibble]; }; + msigdbr = derive2 { name="msigdbr"; version="6.2.1"; sha256="1264j1hs74kq7hyh68vfynadfi6mdpq46qm1hnwzkzzhmbzpb9cg"; depends=[dplyr magrittr rlang tibble]; }; msir = derive2 { name="msir"; version="1.3.1"; sha256="1ipzgdffsqly3dp91pw7yp3h5cwn08l9qsj7cdmrykd42jc98950"; depends=[mclust rgl]; }; msltrend = derive2 { name="msltrend"; version="1.0"; sha256="1rwy77ijf3hzq2zp47cijwvqcq34rdlfxwhrd9l56bvmlmzr1dqx"; depends=[changepoint forecast plyr Rssa tseries zoo]; }; msm = derive2 { name="msm"; version="1.6.6"; sha256="06m7fflb6lgjfnj9v4wjc63x2as8jvc24qmz6jvgm9fw7hnm24px"; depends=[expm mvtnorm survival]; }; @@ -8791,21 +9175,21 @@ in with self; { msme = derive2 { name="msme"; version="0.5.3"; sha256="0mq57zdas1s87nblnvbif9lisgahfhvmabglvp9imr1mvpwybpbh"; depends=[lattice MASS]; }; msmtools = derive2 { name="msmtools"; version="1.3"; sha256="0p7xpj78cjc1s015ma7vc38kqiy6wvpyixrdinx4ngig1pqfrq4p"; depends=[data_table msm survival]; }; msos = derive2 { name="msos"; version="1.1.0"; sha256="1dlqmjz5f8h71334kzdjbzvkn0dhysp7fb18g45qqs79cqpf1vzf"; depends=[mclust tree]; }; - msr = derive2 { name="msr"; version="0.4.4"; sha256="1r7kzicyi380xylw4vl88918gqmvs875f3rssx57yg28swb93sv0"; depends=[colorspace e1071 glmnet RColorBrewer rgl]; }; mssqlR = derive2 { name="mssqlR"; version="1.0.0"; sha256="0qdnm7cx9cg14vfcnkmcjqr1jpxsw8xlrbnxldvzz44mzv2n878l"; depends=[magrittr RODBC]; }; mstR = derive2 { name="mstR"; version="1.2"; sha256="0v8cv9pswkvw0lva6jx5vavsb20dawgq83gn4rgydyhvigcl5szd"; depends=[]; }; mstate = derive2 { name="mstate"; version="0.2.11"; sha256="13kw1n1p2f1f0k5hkcc4732wlhiy3csx8nx2ajrgw06svzksgh3y"; depends=[RColorBrewer survival]; }; mstherm = derive2 { name="mstherm"; version="0.4.7"; sha256="04jrp0w17svwmrvx356jmh04npbwhk9nvfy3r39vqr82yrvn6jip"; depends=[doParallel foreach nls2 plotrix RColorBrewer]; }; + mstrio = derive2 { name="mstrio"; version="10.11.1"; sha256="1k407b75kfvqlvlr9wcklf81b2cby3yi6jdi5ka661n5rybcs4nn"; depends=[httr jsonlite openssl]; }; msu = derive2 { name="msu"; version="0.0.1"; sha256="1vhh9725dbywmzihnmsq1jircpn91r8227j2f76fvma9rwss90p7"; depends=[entropy]; }; mtconnectR = derive2 { name="mtconnectR"; version="1.1.0"; sha256="068rp4n2afl9qgqrnp0a4lmnq7mq9wrc2yi361bfvib96gzg1fdw"; depends=[data_table dplyr dtw ggplot2 magrittr plyr proxy stringr tidyr XML]; }; mthapower = derive2 { name="mthapower"; version="0.1.0"; sha256="17svh0q9a982a390fgwgvrc2kygxxgyacb3j6gcksbikjrvkcfpw"; depends=[]; }; mtk = derive2 { name="mtk"; version="1.0"; sha256="0vq2xlxf86l92fl91qm8m4yfjyz1h8szmwxiics7sc9f0as0dkmy"; depends=[lhs rgl sensitivity stringr XML]; }; mtsdi = derive2 { name="mtsdi"; version="0.3.5"; sha256="0j4hl690n8x7zfpygw5qv0m0jyl8dnz1d3r4314w06h7c578n2kp"; depends=[gam]; }; - muHVT = derive2 { name="muHVT"; version="0.1.0"; sha256="1lkqas8ghnkgdnnhjmm1aivgabnqgpd3hfk8i3z7bajvi201qvx4"; depends=[conf_design deldir Hmisc MASS plyr sp splancs]; }; + muHVT = derive2 { name="muHVT"; version="0.2.1"; sha256="0qndbg9m3267s8h7gphcm4rkchfgkyzd1301wr6iajv0shrc98rv"; depends=[conf_design deldir dplyr ggplot2 Hmisc magrittr MASS purrr sp splancs]; }; muRL = derive2 { name="muRL"; version="0.1-11"; sha256="1pyspp1wpd80hcla1zwnl3misqggfk0ls54akwnx5aa617bibzz8"; depends=[maps stringr]; }; muStat = derive2 { name="muStat"; version="1.7.0"; sha256="18727xj9i9hcnpdfnl1b9wd6cp7wl1g74byqpda2gsrcardl57wz"; depends=[]; }; muckrock = derive2 { name="muckrock"; version="0.1.0"; sha256="16lm1iiaaws7clby7qgblqdiznw6abjjgvsxlfpza7l2xdvplxpg"; depends=[]; }; - mudata2 = derive2 { name="mudata2"; version="1.0.2"; sha256="14jd0fwc11a5640p0vr5dgfw7f1h7473ybqhalg20n7519jybfcb"; depends=[dplyr ggplot2 jsonlite lubridate magrittr readr rlang stringr tibble tidyr tidyselect]; }; + mudata2 = derive2 { name="mudata2"; version="1.0.3"; sha256="14nzi90gglq2dzwdq2bkpnwiz5fdfsf987ailii0c77xkd6j98jm"; depends=[dplyr ggplot2 jsonlite lubridate magrittr readr rlang stringr tibble tidyr tidyselect]; }; mudfold = derive2 { name="mudfold"; version="1.1.0"; sha256="0mp25lad79dx2101srarx26my172jbkd6a0bzr87hjdgqr1pys5b"; depends=[ggplot2 gtools reshape2 yesno zoo]; }; mueRelativeRisk = derive2 { name="mueRelativeRisk"; version="0.1.1"; sha256="16yclfmgxc32pv00vyb9fjdh4syax8ynizr8a29haiq22q5fqclh"; depends=[]; }; muhaz = derive2 { name="muhaz"; version="1.2.6"; sha256="1b7gzygbb5qss0sf9kdwp7rnj8iz58yq9267n9ffqsl9gwiwa1b7"; depends=[survival]; }; @@ -8824,14 +9208,15 @@ in with self; { multiROC = derive2 { name="multiROC"; version="1.1.1"; sha256="15ydbxpkdyvsc55di13jvwh9p6dzxc1yj93w1cwsd8jp2y10wsd3"; depends=[boot magrittr zoo]; }; multiband = derive2 { name="multiband"; version="0.1.0"; sha256="1f4gmy0yf9zid7kl05zncvvig6hs4nl1h9wkrkc24rxx9risw9k9"; depends=[]; }; multibiplotGUI = derive2 { name="multibiplotGUI"; version="1.0"; sha256="0ig7r4p8mq594cjwclbqwjk8saqkvjqjbbnnxj1hc1sdj7qdlcpf"; depends=[cluster dendroextras Matrix rgl shapes tcltk2 tkrplot]; }; - multicastR = derive2 { name="multicastR"; version="1.0.0"; sha256="0gs5pbnf9jr7l1hi6dq54a2isx43gdvbxx0p354r060gddj2xwqd"; depends=[data_table]; }; + multicastR = derive2 { name="multicastR"; version="1.0.1"; sha256="1sf5mn5hgz34ildga00462j92cr6v19132ns0sf9klwcrir8fqfb"; depends=[data_table stringi xml2]; }; multichull = derive2 { name="multichull"; version="1.0.0"; sha256="1gc7kxxlbanc6rmmbf6h85jf7kj0a78h23m5vwwqqliv018qsv2n"; depends=[igraph plotly shiny shinythemes]; }; multicmp = derive2 { name="multicmp"; version="1.1"; sha256="0mz7ksc5h6dy95l3kbsamm191372blhlrj573krc57bj93lmp1a5"; depends=[numDeriv]; }; + multicolor = derive2 { name="multicolor"; version="0.1.1"; sha256="1n7mxjkpd54y41lr3kwn3gwlka9p812jgazhlm9m6s9bc34sw3y9"; depends=[cowsay crayon dplyr glue magrittr purrr stringr tibble tidyr]; }; multicon = derive2 { name="multicon"; version="1.6"; sha256="16glkgnm4vlpxkhf1xw1gl1q10yavx9479i21v29lldag35z8pqx"; depends=[abind foreach mvtnorm psych sciplot]; }; multicool = derive2 { name="multicool"; version="0.1-10"; sha256="1ybg9piya9psqg42w9i3zsnavbxhkfklfwl7cb420i5nkq6wpc2v"; depends=[Rcpp]; }; - multifluo = derive2 { name="multifluo"; version="1.0"; sha256="1blmr2cdbdwfyivvla0nmv2n44m168f3d11g5i7vydh8fl17l8vr"; depends=[ellipse imager]; }; + multifluo = derive2 { name="multifluo"; version="1.1"; sha256="1hnh1gj6lfnh2fn0v064bszydgsr6p9f7p8yxyw5rdxfrxymiw09"; depends=[agricolae ellipse imager]; }; multifwf = derive2 { name="multifwf"; version="0.2.2"; sha256="1l6z3pzz6g6w1spp1f918jh6w0jm93qyc882rj8jhn1198d2s8nd"; depends=[]; }; - multigraph = derive2 { name="multigraph"; version="0.75"; sha256="0y4ibyy7v5hgxilrw5fxhj12597yl9q8zla5xvvhn9g7ir6xvmxd"; depends=[multiplex]; }; + multigraph = derive2 { name="multigraph"; version="0.91"; sha256="1ind8zqqcy4k97sdimn7bn85nbqwda92z0dp80kilcsvlhf47y35"; depends=[multiplex]; }; multigroup = derive2 { name="multigroup"; version="0.4.4"; sha256="1r79zapziz3jkd654bwsc5g0rphrk9hkp1fpik8jvjsa1cix40mq"; depends=[MASS]; }; multilaterals = derive2 { name="multilaterals"; version="1.0"; sha256="11zfdhn6qzqz0n31g23bn40wnfzkjndb753iiqvihirphzb74v5v"; depends=[ape igraph]; }; multilevel = derive2 { name="multilevel"; version="2.6"; sha256="19zrvpq23dn69d7kai1rgw5b8ibmgybnbg6isliq0n8bv9jvrzia"; depends=[MASS nlme]; }; @@ -8840,11 +9225,11 @@ in with self; { multimode = derive2 { name="multimode"; version="1.3"; sha256="130sh1r92z7415j4liz7ka1lpq0b5dxwqdh8s2lnd0wyjz8ysh3k"; depends=[diptest ks rootSolve]; }; multinbmod = derive2 { name="multinbmod"; version="1.0"; sha256="1c4jyzlcjkqdafj9b6hrqp6zs33q6qnp3wb3d7ldlij7ns9fhg71"; depends=[]; }; multinet = derive2 { name="multinet"; version="1.1.5"; sha256="15zwwksyfacvlkwrbslr2rz108xb1qmq37r6zxk022hi9gkh4mnz"; depends=[igraph Rcpp]; }; - multinets = derive2 { name="multinets"; version="0.2.0"; sha256="05m0xin8wxshmwb3b9cgsvi8037wvmirbyyim1xxx2ppfwrdr2a6"; depends=[igraph Rcpp]; }; + multinets = derive2 { name="multinets"; version="0.2.1"; sha256="00h1nqi49mix5rxp39i46pimmr3rl0c2869g7ss8cy0kl8hl41hz"; depends=[igraph igraphdata Rcpp]; }; multinomRob = derive2 { name="multinomRob"; version="1.8-6.1"; sha256="1fdjfk77a79fy7jczhpd2jlbyj6dyscl1w95g64jwxiq4hsix9s6"; depends=[MASS mvtnorm rgenoud]; }; - multipanelfigure = derive2 { name="multipanelfigure"; version="1.0.0"; sha256="08vwz3d3gwybb1dzxhmzzik636k7y6dvrwkxpdsij7zw9p5gbbgs"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types caTools ggplot2 gridGraphics gtable jpeg magrittr png rsvg tiff]; }; + multipanelfigure = derive2 { name="multipanelfigure"; version="2.0.0"; sha256="0p9dipwkqfrfdd50s002byhwrdbzwp7nj1bswf8anpzvqnd8iz1a"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_types ggplot2 gridGraphics gtable magick magrittr stringi]; }; multipleNCC = derive2 { name="multipleNCC"; version="1.2-1"; sha256="080wpyifpw41p6jip2ia7439jdhzyb7lbhs2qzzg0hn6c0qq7mrr"; depends=[mgcv survival]; }; - multiplex = derive2 { name="multiplex"; version="2.8"; sha256="01l3kmvsrrq0c98dv5m25yjjcbc99in6dv9k5h54cyjsw4jsjhns"; depends=[]; }; + multiplex = derive2 { name="multiplex"; version="2.9"; sha256="1na0w4kzaswgzyw4wq8qmihasgbvbl426a2cx3y672l80rgjhhdh"; depends=[]; }; multipol = derive2 { name="multipol"; version="1.0-7"; sha256="1rkrg3kayxa05jayg8bk1mm3hcvi76570wqfja5953hd9j4krgha"; depends=[abind]; }; multirich = derive2 { name="multirich"; version="2.1.1"; sha256="04jr5jvds70j2psyxz12d2my61jcj5hvdyv10pvar2rpqaw0yxyh"; depends=[]; }; multiselect = derive2 { name="multiselect"; version="0.1.0"; sha256="1cda38zq7c1r56wdfpr5dg0jfw4kzi9p7jq59qm04j461j9ag3q6"; depends=[Hmisc]; }; @@ -8852,19 +9237,19 @@ in with self; { multisom = derive2 { name="multisom"; version="1.3"; sha256="0msxmrj4iawxg4vf4r7kj26zalxz4di2w4nxgxiakiig4g4ggy9z"; depends=[class kohonen]; }; multispatialCCM = derive2 { name="multispatialCCM"; version="1.0"; sha256="1fzd91w10iln8qb81z240lq3fi4gq22l4rh9npkav6fiq6g6rlp8"; depends=[]; }; multistate = derive2 { name="multistate"; version="0.2"; sha256="0jdgyzc99k4py39g98c4dlcdl918568ihcyhb7csxbsn1zn1qm9l"; depends=[date relsurv statmod survival]; }; - multistateutils = derive2 { name="multistateutils"; version="1.1.0"; sha256="1fpfmqwspvrhq4n02ha5vpaybnhg8ylqmixm2r2xrk2x3kq7733r"; depends=[data_table dplyr magrittr networkD3 Rcpp survival tidyr]; }; + multistateutils = derive2 { name="multistateutils"; version="1.2.0"; sha256="0dngc2vyqgcck1iaf9r116r6xp65axivqq8hl6sa7ib6rgwknhkw"; depends=[data_table dplyr magrittr networkD3 Rcpp survival tidyr]; }; multitaper = derive2 { name="multitaper"; version="1.0-14"; sha256="04wd9bbhyx7697pfy0fpj02v1csr48hkpqj62h9p8a6w84ji4k68"; depends=[]; }; - multivariance = derive2 { name="multivariance"; version="1.1.0"; sha256="1yl1qfckpf98j4ca3wv8zw8vd79isaqvq7qkakyhxy0ljx20jmlk"; depends=[abind igraph]; }; + multivariance = derive2 { name="multivariance"; version="1.2.0"; sha256="07cm2qji04lmxkm4sqigln7rihanaww98d4k8p1rn6d62mcxyizv"; depends=[abind igraph Rcpp]; }; multivator = derive2 { name="multivator"; version="1.1-9"; sha256="0vbqvhmym46zjr1h4s53sjrddfjpv8wi0sq4lrh2rmqarq068416"; depends=[emulator mvtnorm]; }; multiwave = derive2 { name="multiwave"; version="1.2"; sha256="1bw071izjxrsk5gx8s49nrlryabpgpg7k2z1ghmk8p6i9m5apnl8"; depends=[]; }; multiway = derive2 { name="multiway"; version="1.0-5"; sha256="0ni38h16nddwib9nvcby59rsn9913qwhrlkpdkz99fwz8cnl8rw2"; depends=[CMLS]; }; multiwayvcov = derive2 { name="multiwayvcov"; version="1.2.3"; sha256="1znsmca16jac8s5z0j64cck27pvf88anm1mfblabqchqqcz1ykfc"; depends=[boot sandwich]; }; multxpert = derive2 { name="multxpert"; version="0.1"; sha256="03mvf4m0kabm22vy4zkj1cfh884larpj8cbgg3p9l3pag20snf1l"; depends=[mvtnorm]; }; muma = derive2 { name="muma"; version="1.4"; sha256="0midx3wzyvcz8rk9kvsfll3xg41pkz40si4jw2ps54ykkf9rkm99"; depends=[bitops car caTools gplots gtools mvtnorm pcaPP pdist pls robustbase rrcov]; }; - mumm = derive2 { name="mumm"; version="0.2.0"; sha256="1dizjqi29cw2bpsr0i3a27mys2rs90yhbg1lc7a2nkg7lwqgb993"; depends=[lme4 Matrix Rcpp RcppEigen stringr TMB]; }; + mumm = derive2 { name="mumm"; version="0.2.1"; sha256="1wjg2pqn2wb9hk9mqgpi3k26qwjnkmp4apx09lxcwrz35bbwhfzv"; depends=[lme4 Matrix Rcpp RcppEigen stringr TMB]; }; munfold = derive2 { name="munfold"; version="0.3.5"; sha256="17zizx9r0f8dxb7dkgn1nn0fp7ydy6r155p1zfz0v93jc26lc1hb"; depends=[MASS memisc]; }; munsell = derive2 { name="munsell"; version="0.5.0"; sha256="16g1fzisbpqb15yh3pqf3iia4csppva5dnv1z88x9dg263xskwyh"; depends=[colorspace]; }; - munsellinterpol = derive2 { name="munsellinterpol"; version="2.0.1"; sha256="1pyqsgx2fhrh264yvg6ybkr4skksn1hlanh8950df1f77h70ji6i"; depends=[geometry rootSolve spacesRGB]; }; + munsellinterpol = derive2 { name="munsellinterpol"; version="2.1-3"; sha256="0y0ab133sh4c4avdgwjja14z290gczkzv3xlgr0lwdwhfbb60cc2"; depends=[geometry rootSolve spacesRGB spacesXYZ]; }; murphydiagram = derive2 { name="murphydiagram"; version="0.11"; sha256="0wax9gjhzz8nphzwijqzllz4y25jksf1vqfcbnfb7zafsfv40rib"; depends=[]; }; musicNMR = derive2 { name="musicNMR"; version="0.0.2"; sha256="09xxc78ajk428yc3617jfxqp5fy89nfc24f1rig6cw28fflwqj0k"; depends=[seewave]; }; musica = derive2 { name="musica"; version="0.1.3"; sha256="0cfzfar706l0xdb0n11m18mayj5rrplvf4qry36vgxsiaxcba90r"; depends=[data_table lubridate magrittr qmap]; }; @@ -8872,9 +9257,9 @@ in with self; { mutSignatures = derive2 { name="mutSignatures"; version="1.2"; sha256="1kbp221lm43a5wiw754yjkd3qidmca20m0i8jlxsqk8ijbp40ky2"; depends=[cluster doParallel foreach ggplot2 pracma proxy]; }; mutoss = derive2 { name="mutoss"; version="0.1-12"; sha256="1yk7p7pb2xm38d3j19ysgwmix48lvimbhkhjjwk5jmr1a0ysx298"; depends=[multcomp multtest mvtnorm plotrix]; }; mutossGUI = derive2 { name="mutossGUI"; version="0.1-11"; sha256="08pcca9gzns83az6jbjzv4xhm1wgmchhzz4f54x1aq0nmvsz3qq1"; depends=[CommonJavaJars JavaGD JGR multcomp mutoss plotrix rJava]; }; - mvLSW = derive2 { name="mvLSW"; version="1.2.1"; sha256="012p828pyzz6xnv2akax5hx79v522dg4a2gqrjss526qylpg5j9l"; depends=[fields wavethresh xts zoo]; }; + mvLSW = derive2 { name="mvLSW"; version="1.2.2"; sha256="19bz1hryw9jhw2y3cnx4bqykdqpfgdlnmkx7ka8i96yb5xg4791q"; depends=[fields wavethresh xts zoo]; }; mvMISE = derive2 { name="mvMISE"; version="1.0"; sha256="0lnc5g3ksl5cvwylh8p8baxyvq3z32a2i337q7lhg00j031ccy5c"; depends=[lme4 MASS]; }; - mvMORPH = derive2 { name="mvMORPH"; version="1.0.9"; sha256="09368vgyb1s18awfr07hs1s40n2h15hy08fmir3ayhdfrdain4k6"; depends=[ape corpcor phytools spam subplex]; }; + mvMORPH = derive2 { name="mvMORPH"; version="1.1.0"; sha256="0v63wi4la5kw59xdl1bmsc8hh8gfpm89s79dzrkbdkmakm740vvx"; depends=[ape corpcor glassoFast phytools spam subplex]; }; mvMonitoring = derive2 { name="mvMonitoring"; version="0.1.0"; sha256="03nvq8nmrmrpzyxlsqzww5ghk640115l1jgmgwfahhjxkdpkzfxx"; depends=[BMS dplyr lazyeval plyr rlang robustbase xts zoo]; }; mvPot = derive2 { name="mvPot"; version="0.1.4"; sha256="04l9dn8amwp366b6lic5fkl4kck0x2m3xcsqz6as4c3h772nhq1w"; depends=[evd gmp MASS numbers]; }; mvProbit = derive2 { name="mvProbit"; version="0.1-8"; sha256="07dizclqjlwj29yb3xwjihjh8kmn6jiq5cpf8rcirylzykfdv3wk"; depends=[abind bayesm maxLik miscTools mvtnorm]; }; @@ -8885,10 +9270,10 @@ in with self; { mvbutils = derive2 { name="mvbutils"; version="2.7.4.1"; sha256="1vs97yia78xh35sdfv5pj3ddqmy83qgamvyyh9gjg0vdznqhffzg"; depends=[]; }; mvc = derive2 { name="mvc"; version="1.3"; sha256="0kmh6vp7c2y9jf71f4a29b0fxcl0h7m4p8wig4dk3fi7alhjf7ym"; depends=[rattle]; }; mvcluster = derive2 { name="mvcluster"; version="1.0"; sha256="0yfl31scdgsiljvpv1yxc5bwwzr6kbhpjwqh2kql7xf0m0hc1pr4"; depends=[Rcpp RcppArmadillo]; }; - mvctm = derive2 { name="mvctm"; version="1.1"; sha256="00lrnqnzpnvrl84b41ai33iwpyb4qzpjyqrw1d18hj6szybdfhsv"; depends=[Formula MNM nlme quantreg Rfit SpatialNP]; }; + mvctm = derive2 { name="mvctm"; version="1.2"; sha256="0810bmk748cvbls4djspqvkk65j605djqicqg4rkwy2a799l3rgc"; depends=[Formula MNM nlme quantreg Rfit SpatialNP]; }; mvcwt = derive2 { name="mvcwt"; version="1.3"; sha256="0fqdyypmszm00rpl04z8kiiw6jd416a0b2rap3dqq3kchnz8h4s2"; depends=[foreach RColorBrewer]; }; mvdalab = derive2 { name="mvdalab"; version="1.4"; sha256="18wchy517qd45w5y0sr8lcafb7kmscy0q9vsryk9if6x2jq22lqz"; depends=[car dummies ggplot2 MASS moments penalized plyr reshape2 sn]; }; - mvglmmRank = derive2 { name="mvglmmRank"; version="1.2-1"; sha256="1gyc1xjyapadrv43kd4kngld37q8drhx4qfcimsvf7jdp33y6g5d"; depends=[MASS Matrix numDeriv]; }; + mvglmmRank = derive2 { name="mvglmmRank"; version="1.2-2"; sha256="00zxqby8syb959fqgw9i7b0yamgjwddq32jlin6qmnzys5bg1556"; depends=[MASS Matrix numDeriv]; }; mvinfluence = derive2 { name="mvinfluence"; version="0.8-3"; sha256="0nygsldkm61ny5ljcc1r667rywj239j4x59ssi81cb2005kkjgm5"; depends=[car heplots]; }; mvmesh = derive2 { name="mvmesh"; version="1.5"; sha256="0my43559jh8ln1fx5rh5vw24vr6kxpd2h5scylfxfv2qfk794l0b"; depends=[abind geometry rcdd rgl SimplicialCubature]; }; mvmeta = derive2 { name="mvmeta"; version="0.4.11"; sha256="1h1393s7xdi4sv461srsard6w961mcxxmxq9mkmfsgw5hdmkwkr2"; depends=[]; }; @@ -8899,12 +9284,12 @@ in with self; { mvnmle = derive2 { name="mvnmle"; version="0.1-11.1"; sha256="131k2bnn6194y3f35r9cgys8g1z2y52123ng8iijpkpbfd147y92"; depends=[]; }; mvnormtest = derive2 { name="mvnormtest"; version="0.1-9"; sha256="1iaxjwp7bgxhaa4xqvgqb61316mq2fb0452d0pabhmbxkvmvdnj6"; depends=[]; }; mvnpermute = derive2 { name="mvnpermute"; version="1.0.0"; sha256="0mbyj5i5vysrnl3pgypl0cjf3sylsvzfl1pcxkn0q16560vqh2ba"; depends=[]; }; - mvord = derive2 { name="mvord"; version="0.3.1"; sha256="1i1jhvs9h5s07zqa84i1lm3gx70v32agsiymc0v1msqai12plknb"; depends=[MASS Matrix mnormt numDeriv optimx pbivnorm]; }; + mvord = derive2 { name="mvord"; version="0.3.2"; sha256="0gpm7biwmvimsv7zcc8h8gmzl6f1n52gx68cmz2ppz0d1fv0w8sb"; depends=[BB dfoptim MASS Matrix minqa mnormt numDeriv optimx pbivnorm ucminf]; }; mvoutlier = derive2 { name="mvoutlier"; version="2.0.9"; sha256="1d562h3xicq962h27fi95qhrz9vkwxk0p8axhps1cy4b49w4bygi"; depends=[robCompositions robustbase sgeostat]; }; mvprpb = derive2 { name="mvprpb"; version="1.0.4"; sha256="1kcjynz9s7vrvcgjb9sbqv7g50yiymbpkpg6ci34wznd33f7nrxm"; depends=[]; }; mvrtn = derive2 { name="mvrtn"; version="1.0"; sha256="0k0k76wk5zq0cjydncsrb60rdhmb58mlf7zhclhaqmli1cy697k8"; depends=[]; }; mvsf = derive2 { name="mvsf"; version="1.0"; sha256="1krvsxvj38c5ndvnsd1m18fkqld748kn5j2jbgdr3ca9m3i5nlwf"; depends=[mvnormtest nortest]; }; - mvst = derive2 { name="mvst"; version="1.0.1"; sha256="0sv8pd1524pr3xpxplq468dxfd0wipdr41awqwvcljpw5wgl34qa"; depends=[MCMCpack mnormt mvtnorm]; }; + mvst = derive2 { name="mvst"; version="1.1.0"; sha256="03q0kdychsmn4wcn50b6dqhxn4f2mjvrr5rac942xdv75w8qklc9"; depends=[MCMCpack mnormt mvtnorm]; }; mvtboost = derive2 { name="mvtboost"; version="0.5.0"; sha256="06zgx1c2470bh3x6s2awzkxbyij6bvzv23xbvamg77v5pz5bjj6h"; depends=[gbm RColorBrewer]; }; mvtmeta = derive2 { name="mvtmeta"; version="1.0"; sha256="0g0d4lrz854wkd0dz5aiad54i46aqkfhsq6cpbsfv0w5l2kwiqqz"; depends=[gtools]; }; mvtnorm = derive2 { name="mvtnorm"; version="1.0-8"; sha256="0la42lylb7cjrcrc285bn69bz9kyg556xw317iz139dp1yswl410"; depends=[]; }; @@ -8917,28 +9302,29 @@ in with self; { mycor = derive2 { name="mycor"; version="0.1.1"; sha256="00hqmvga22bv43833s974s7ky7lbry3r2bb5kza7kvkn1p6773rg"; depends=[lattice]; }; myepisodes = derive2 { name="myepisodes"; version="1.1.1"; sha256="0xk9bwgpl630nhc8qa2pc0rwqbqk3haxnp78gfxq6sn6z7i44k1p"; depends=[XML]; }; mztwinreg = derive2 { name="mztwinreg"; version="1.0-1"; sha256="1rg6ikaqdrc7q44s3r3km8h45prnvcpzpxd7nxbmh209iz9j19ai"; depends=[mclogit rms]; }; - n1qn1 = derive2 { name="n1qn1"; version="6.0.0-1"; sha256="01bci81lhanxpfl454gl09krgb4229dnq9f34bngwm8ygvdadfgy"; depends=[Rcpp RcppArmadillo]; }; + n1qn1 = derive2 { name="n1qn1"; version="6.0.1-3"; sha256="1k13x4h2rbcra3b8873ymvn4bgj6psaw05ba0hac0spymbp01fzi"; depends=[Rcpp RcppArmadillo]; }; nCDunnett = derive2 { name="nCDunnett"; version="1.1.0"; sha256="0q2db1pixqr0wbx4bd05c98i1p0vgaqsfa1iwjxr08c62a5xhkks"; depends=[]; }; - nCal = derive2 { name="nCal"; version="2017.12-3"; sha256="1k03zrf67il7miap81r2fdnsi15i98wmwc3a8zxn54qfr2w9pcy6"; depends=[drc gdata gWidgets kyotil]; }; + nCal = derive2 { name="nCal"; version="2018.8-20"; sha256="1idgpzivw5wa423z86rf60ri50cyh8p38p4r493i9b2m9qzzqf1x"; depends=[drc gdata gWidgets kyotil]; }; nFCA = derive2 { name="nFCA"; version="0.3"; sha256="1jyyzagmppm3i7vh3ia4ic0zql1w04f66z81v0zpdihd4cbl5ra7"; depends=[]; }; nFactors = derive2 { name="nFactors"; version="2.3.3"; sha256="016d76yfxz7gx7zz5dgwjmj2c5m6kxdmqj0lln5w6d70r9g1kxg7"; depends=[boot lattice MASS psych]; }; nLTT = derive2 { name="nLTT"; version="1.4"; sha256="0718r93xw8hw639xpa5w6lax7agr2k3avqx9dcdybqdp19x9qia0"; depends=[ape coda deSolve testit]; }; nVennR = derive2 { name="nVennR"; version="0.2.1"; sha256="11qkwd8laf67iqyzx3ia424vykvsvy0k9d7labdgqfx2ihd95hh2"; depends=[Rcpp]; }; na_tools = derive2 { name="na.tools"; version="0.3.1"; sha256="1lbzsckfg297n85kzbin65x1l6qgg9l50hd3xi2gflxc7n2xb8bw"; depends=[]; }; - nabor = derive2 { name="nabor"; version="0.4.7"; sha256="16dxnvq6yxlrignzvxjdwzwm32fn2a8bsjqjsg5qz94ir7g3pzm6"; depends=[BH Rcpp RcppEigen]; }; + nabor = derive2 { name="nabor"; version="0.5.0"; sha256="1nj39cdfwrmhgsi3cq8imxv3n6xzc1v6dzdb2cf2hybjk368v4s7"; depends=[BH Rcpp RcppEigen]; }; nadiv = derive2 { name="nadiv"; version="2.16.0.0"; sha256="0pfg9hbhcjgbfmakl1jqqaf9i07i5z5jk7sh2x7x7p4354z30z9y"; depends=[Matrix]; }; naivebayes = derive2 { name="naivebayes"; version="0.9.2"; sha256="0xmgcvvhfh7v8afi8fywaldawbx3s5hwgpvyyp2c9m6nrhw1kknl"; depends=[]; }; naivereg = derive2 { name="naivereg"; version="1.0.1"; sha256="0wvyv54q3r4jz03jdbsmnxsinzpqcac6xjvzcrjjdzbkqfxicxal"; depends=[gmm grpreg]; }; namedCapture = derive2 { name="namedCapture"; version="2017.06.01"; sha256="14zimn3wbavbkwra8vfmqdm1q5bmlmsbg0b29cjly5dd4zlfzzb0"; depends=[]; }; namespace = derive2 { name="namespace"; version="0.9.1"; sha256="1bsx5q19l7m3q2qys87izvq06zgb22b7hqblx0spkvzgiiwlq236"; depends=[]; }; nandb = derive2 { name="nandb"; version="1.0.1"; sha256="1hg6j8sv2fhaqwp2hzkgdwfymr2f3j6506vz2kshj3h3387nfhm4"; depends=[autothresholdr checkmate detrendr dplyr filesstrings ijtiff magrittr MASS purrr Rcpp rlang stringr]; }; - naniar = derive2 { name="naniar"; version="0.3.1"; sha256="0mscn99x3wwf5jdi6khlf6n9w737icf07vhz6yqsqpkzsd8z825w"; depends=[dplyr forcats ggplot2 glue magrittr purrr rlang tibble tidyr viridis visdat]; }; + naniar = derive2 { name="naniar"; version="0.4.0.0"; sha256="0b8hi00x6anlkkpw7mr6hiizpw6ljv3m5h9w6c4rj05psv5nm3w2"; depends=[dplyr forcats ggplot2 glue magrittr purrr rlang tibble tidyr UpSetR viridis visdat]; }; nanop = derive2 { name="nanop"; version="2.0-6"; sha256="007gdc93pk0vpfmsw7zgfma2k1045n2cxwwsyy276smy0ys9fdhp"; depends=[distrEx rgl]; }; - nanotime = derive2 { name="nanotime"; version="0.2.1"; sha256="0zb6gwxzmcmk2v1020xc2l3bzrz8kz1b445x3ci6s7pgwh0njxra"; depends=[bit64 RcppCCTZ zoo]; }; + nanotime = derive2 { name="nanotime"; version="0.2.3"; sha256="0pcz49rm9l97xj5s7pvff2mf9373xhj0wr8bc57ibbi38adgcvbx"; depends=[bit64 RcppCCTZ zoo]; }; naptime = derive2 { name="naptime"; version="1.3.0"; sha256="1cadfv5sdsmz61kf96hf2gbnghf24q40g5c3h9b8prvkxslap691"; depends=[lubridate]; }; nardl = derive2 { name="nardl"; version="0.1.5"; sha256="1xi1fkwgkfc1b8qsgi4lrjx419778qk0vxzl23azcziwa6fha5p8"; depends=[Formula gtools strucchange tseries]; }; - narray = derive2 { name="narray"; version="0.4.0"; sha256="0cr0y8mqwprxk0bv9160xvqxgvqkihn3avzsjm6ccivvb8zlkqxv"; depends=[reshape2 stringr]; }; + narray = derive2 { name="narray"; version="0.4.1"; sha256="09n50shk2gy1m85kmvq8g3zh2nrikpllv8gph9x2id1p62rbqf1y"; depends=[progress stringr]; }; nasadata = derive2 { name="nasadata"; version="0.9.0"; sha256="0y88qdy8c1y0prsajxic5vdqfixv9knjsbhw3vbfac8wv3a69bjl"; depends=[dplyr jsonlite plyr png]; }; + nasapower = derive2 { name="nasapower"; version="1.0.2"; sha256="1p99yl47l1dvyhkl38alzszbk5vs28a2zh3miqxsqmsqzmmjbsd3"; depends=[APSIM crul curl jsonlite lubridate readr tibble]; }; nasaweather = derive2 { name="nasaweather"; version="0.1"; sha256="05pqrsf2vmkzc7l4jvvqbi8wf9f46854y73q2gilag62s85vm9xb"; depends=[]; }; nat = derive2 { name="nat"; version="1.8.11"; sha256="1s5hbi1b20jq0qv4px0zrwsivhi2mdlqbwx4lv55mdhj447rxk1x"; depends=[digest filehash igraph nabor nat_utils plyr rgl yaml]; }; nat_nblast = derive2 { name="nat.nblast"; version="1.6.2"; sha256="0b2gzyzszj2v5girxyv31nvds0837lzvim7x7bs9h897yrxs57k8"; depends=[dendroextras nabor nat plyr rgl spam]; }; @@ -8947,25 +9333,26 @@ in with self; { natserv = derive2 { name="natserv"; version="0.1.4"; sha256="0qwf7lapx5gchk8xmdnmxr10j5dnkp52mqnh1ja216z7l841cl07"; depends=[crul data_table tibble xml2]; }; natural = derive2 { name="natural"; version="0.9.0"; sha256="0zxwbf3gg2h0bhl2w0md3rd162vlsgg0dv3187hc0ax7333cc4cx"; depends=[glmnet Matrix]; }; naturalsort = derive2 { name="naturalsort"; version="0.1.3"; sha256="0mz801y9mzld9ypp3xmsjw2d8l9q97sdnv09wrci9xi3yg2sjf6d"; depends=[]; }; - nbc4va = derive2 { name="nbc4va"; version="1.0"; sha256="0y1qpkzjr327qyvmqf129m400rvn6gwk72ccnly6cqq53icrarn4"; depends=[]; }; + nbc4va = derive2 { name="nbc4va"; version="1.1"; sha256="025p9h1ghrsq4h439gx25ffpyvh2kp1i51hm7kbzx8nmh4ka8aff"; depends=[]; }; nbconvertR = derive2 { name="nbconvertR"; version="1.0.2"; sha256="1dc9jxfibvb27qwiykj93322nb1ahwrg69zqcc0p9xp0rpsim02w"; depends=[]; }; nbpMatching = derive2 { name="nbpMatching"; version="1.5.1"; sha256="0f90k9vq05gkc0sgywb98frig63df0ih4z41dq7m2inx1zk5rqns"; depends=[Hmisc MASS]; }; - ncar = derive2 { name="ncar"; version="0.4.0"; sha256="0in8nvkxgd6p5xdwyqnqlnhskysbja9lw1pw3hl8zfn1qhcgqxl9"; depends=[NonCompart rtf]; }; + ncappc = derive2 { name="ncappc"; version="0.3.0"; sha256="0bf00iskrd3x43839bwn957mi3qvm2dhcmqa7hl1ib0gp2r1cnzx"; depends=[bookdown Cairo dplyr ggplot2 gridExtra gtable knitr lazyeval magrittr PopED purrr readr reshape2 rlang rmarkdown scales tibble tidyr xtable]; }; + ncar = derive2 { name="ncar"; version="0.4.1"; sha256="0nqc3ari3ghxygqvb3vfzdqclh77mbhyh3pki86wwx6ym62b1bx0"; depends=[NonCompart rtf]; }; ncbit = derive2 { name="ncbit"; version="2013.03.29"; sha256="0f07h8v68119rjvgm84b75j0j7dvcrl6dq62vp41adlm2hgjg024"; depends=[]; }; ncdf_tools = derive2 { name="ncdf.tools"; version="0.7.1.295"; sha256="1jgxivmg2gzvkn09n13i5xr1v0xcyp5ckhwxz6g5kdh9z2dkjhc2"; depends=[abind chron JBTools plotrix raster RColorBrewer RNetCDF]; }; ncdf4 = derive2 { name="ncdf4"; version="1.16"; sha256="0lwjjis0b83c4l3xvqai4ckzrskd6mychck1iwxcxgjvh0d77mgd"; depends=[]; }; ncdf4_helpers = derive2 { name="ncdf4.helpers"; version="0.3-3"; sha256="051akd7r6zx805a0xwcs95q5sd8alag0f1gzqjk3n188q8r3ji5j"; depends=[abind ncdf4 PCICt]; }; ncdump = derive2 { name="ncdump"; version="0.0.3"; sha256="09g98mzpky32z41jf23ahzhyv34l34y1gqq99j2hl4pqlvvhxs9i"; depends=[dplyr ncdf4]; }; - ncf = derive2 { name="ncf"; version="1.2-5"; sha256="0w7zaiiy1ddahq8nw3q23k6qh4yw2d1iw4wybwiii3spn8hab57s"; depends=[]; }; + ncf = derive2 { name="ncf"; version="1.2-6"; sha256="1ac1jc7f6ywngbf9h9vb4rfm10cakljn1i48ga815h3m71cagmak"; depends=[]; }; ncg = derive2 { name="ncg"; version="0.1.1"; sha256="1jzkzp61cc5jxmdnl867lcrjjm7y2iw9imzprbd098p1j3w8fvj7"; depends=[]; }; - ncmeta = derive2 { name="ncmeta"; version="0.0.2"; sha256="1qr0zfyy8g3zrmvg6i6b7sfvl3lavr391rqgf6pqhslg7i9cgpiz"; depends=[dplyr rlang RNetCDF tibble]; }; - ncodeR = derive2 { name="ncodeR"; version="0.1.0"; sha256="0bjjz9x6cfgkgc6z32pkl5b6khhdl5yjn9mi2b3n184kvpszjygj"; depends=[cli R6 rhoR]; }; + ncmeta = derive2 { name="ncmeta"; version="0.0.3"; sha256="14gbl7ln5ylplj12rsksyw0wlimh1gjnjm1c26mc8yg2h1cv3667"; depends=[dplyr rlang RNetCDF tibble]; }; + ncodeR = derive2 { name="ncodeR"; version="0.1.2"; sha256="1wa87shdcngf6x22gcysylkxvj8h2k6f88r867wiagz0c01mq9bf"; depends=[cli R6 rhoR]; }; ncpen = derive2 { name="ncpen"; version="0.2.0"; sha256="1wrpscd9n7z9lz7537qyy4rn4pjznlb8zwb79kkzmnfvyj21fi1r"; depends=[Rcpp RcppArmadillo]; }; - ncvreg = derive2 { name="ncvreg"; version="3.10-0"; sha256="0q9rk1mz2rm1h99m093kz7a2p6fl3pj4nqzblp3154q8i1kva7za"; depends=[]; }; - ndjson = derive2 { name="ndjson"; version="0.6.0"; sha256="0w7a587q45hkzmjhzlyrhk0hw4c8avkfzf4ai0wib5qk3al8gk6n"; depends=[data_table dplyr dtplyr Rcpp]; }; - ndl = derive2 { name="ndl"; version="0.2.17"; sha256="08h01rw7gsa31zp91q2rsw1ba9yf0fyhz3w8s9xq5788qwc80280"; depends=[Hmisc MASS Rcpp]; }; - ndtv = derive2 { name="ndtv"; version="0.12.2"; sha256="0jyzdi19n2h6kf8kbibg1lap3mxq9bbn390xwrv2abnc3y437vqb"; depends=[animation base64 jsonlite MASS network networkDynamic sna statnet_common]; }; - nearfar = derive2 { name="nearfar"; version="1.1"; sha256="0i2nc1b4vslgjj29x5q24yxv9l3i0g5hcrbm9xy1b3039n70cwix"; depends=[car GenSA MASS nbpMatching]; }; + ncvreg = derive2 { name="ncvreg"; version="3.11-0"; sha256="0348xngd9357x3nzhpqbcxcp1vgb5ycz8wjv023lm9lmzyj8frzc"; depends=[]; }; + ndjson = derive2 { name="ndjson"; version="0.7.0"; sha256="1hqbp5aii3x2yygsy4zfv3j2zl78fzrydqj3ycfl3k3nnrkrf8h5"; depends=[data_table dplyr dtplyr Rcpp]; }; + ndl = derive2 { name="ndl"; version="0.2.18"; sha256="0b235v6jf98rrqp5aqw3jkk7mq8dbqmhb758zbzza1mavh4n2k7s"; depends=[Hmisc MASS Rcpp]; }; + ndtv = derive2 { name="ndtv"; version="0.12.3"; sha256="08bvkfraj2sl879fywsl5k403xfhxfg55yd72nms2z8d3fqgcvj8"; depends=[animation base64 jsonlite MASS network networkDynamic sna statnet_common]; }; + nearfar = derive2 { name="nearfar"; version="1.2"; sha256="116rq797a5fascirz8xg465fywjf40j1k5czryvqzpik0if0w00r"; depends=[car GenSA MASS nbpMatching]; }; neariso = derive2 { name="neariso"; version="1.0"; sha256="1npfd5g5xqjpsm5hvhwy7y84sj5lqw9yzbnxk6aqi80gfxhfml4c"; depends=[]; }; neat = derive2 { name="neat"; version="1.1.3"; sha256="0d8igx576jhi7f666nwn0wpdyvin974k5cfm7wdszzbnpng5961k"; depends=[igraph]; }; neatmaps = derive2 { name="neatmaps"; version="1.1.0"; sha256="0qsc0jwnyadbm45qrskpmw12i980q11i988mga8ky3x4fa4jp82d"; depends=[dendextend ggplot2 heatmaply igraph pvclust]; }; @@ -8974,25 +9361,26 @@ in with self; { negenes = derive2 { name="negenes"; version="1.0-8"; sha256="0qyhypryp3p8c876jffg1syg05b370mw24clwlx733yx86qhmb1v"; depends=[]; }; neighbr = derive2 { name="neighbr"; version="1.0"; sha256="0612nzpryj4xp0ncpvpn56x5n9ammzjp3ysq1rj1fc84h0p7nml3"; depends=[]; }; neldermead = derive2 { name="neldermead"; version="1.0-11"; sha256="0gf9rfwz48sadl6960mpfb6a3l9n5p28yq3n0a9vz8mr57vh1dzg"; depends=[optimbase optimsimplex]; }; - neotoma = derive2 { name="neotoma"; version="1.7.0"; sha256="0f4s5yw0yj4n8lkvbl2l3ivdclg9pknyss7qhppp85rdxzwxilpq"; depends=[analogue httr jsonlite leaflet plyr reshape2 xml2]; }; + neotoma = derive2 { name="neotoma"; version="1.7.2"; sha256="0kxx1ymdy2grjmi7wb2lrk5hwrfgrlxpvhwwwkwxaqrpxmx6sk7v"; depends=[analogue dplyr httr jsonlite leaflet plyr reshape2 xml2]; }; nephro = derive2 { name="nephro"; version="1.2"; sha256="1izmzx8lah322xzb42asfnrvr2c9yqd0zf7fmrhwd3p4rr1rqa7d"; depends=[]; }; - nesRdata = derive2 { name="nesRdata"; version="0.1.0"; sha256="1h33hql0vgkr2ps1ysisdxxb0cnm18mh8sbd3fxy9xf42icwfwdb"; depends=[dataone dplyr purrr rappdirs readr]; }; + nesRdata = derive2 { name="nesRdata"; version="0.2.0"; sha256="1cr5d600bnslxbm2kknzwivvb4zyfsrf8rbrk3kk0j6dpclx5x6s"; depends=[dataone dplyr purrr rappdirs readr]; }; nestedRanksTest = derive2 { name="nestedRanksTest"; version="0.2"; sha256="0r08jp8036cz2dl1mjf4qvv5qdcvsrad3cwj88x31xx35c4dnjgj"; depends=[]; }; - nestfs = derive2 { name="nestfs"; version="0.8.4"; sha256="1w2wb3wphpx8y17jwpnbqq9igyq854rsa35bhk51m422zhygqygk"; depends=[dgof foreach]; }; + nestfs = derive2 { name="nestfs"; version="0.9"; sha256="0vx6bvm4wpx4hnyxnldvkj0il7j7hlrmlpiza1dawqr3kx08c86l"; depends=[dgof foreach pROC]; }; net_security = derive2 { name="net.security"; version="0.3.0"; sha256="15vvcmakl9hl1srdhjf73g2bwwcxn93220i4gv0rcsw5732mjanz"; depends=[data_table dplyr jsonlite plyr R_utils stringr XML]; }; - netCoin = derive2 { name="netCoin"; version="0.2.8"; sha256="0axac72fj5qhssdpx8k20lgayzpwzcd3pp7cz4mv6cwfzc0y8768"; depends=[haven igraph Matrix]; }; + netCoin = derive2 { name="netCoin"; version="0.3.0"; sha256="1lzzl28q3ald01yaxiiwqj716cpslya8i2m89nydpylh0c1pgs52"; depends=[haven igraph Matrix]; }; netSEM = derive2 { name="netSEM"; version="0.5.0"; sha256="0gcs38r3xwwcxhgs1xfbkccz9k0y7dk5kky48fvmys8v1p4rsjpp"; depends=[DiagrammeR DiagrammeRsvg gtools htmlwidgets knitr magrittr MASS png rsvg segmented svglite]; }; netassoc = derive2 { name="netassoc"; version="0.6.3"; sha256="1hyshnbpq60a3y13b4sh1c2rk78x09q01b7q6xrgv10w7bn9r2sg"; depends=[corpcor huge igraph infotheo vegan]; }; netcoh = derive2 { name="netcoh"; version="0.2"; sha256="0q60hvyparlwdww6as6hcdzfs6q3n8z1rfpj53r5q2s77x6q07xx"; depends=[Matrix Rcpp RcppArmadillo]; }; netcom = derive2 { name="netcom"; version="1.0.4"; sha256="0fka14sffm0p1gldk27fd62ng05spfpbn665b4w5hdf1z4z0bs20"; depends=[clue expm igraph Matrix pdist pracma vegan]; }; + netdep = derive2 { name="netdep"; version="0.1.0"; sha256="0mrbqn5d8iqvs98a0kski0vya135z7l902xafya96s2h288jchx7"; depends=[igraph igraphdata MASS mvrtn]; }; netdiffuseR = derive2 { name="netdiffuseR"; version="1.20.0"; sha256="0z7k62dipksc8gfppicbknh5sig7jdlr80h15q89bbk26jg5lqsr"; depends=[boot igraph MASS MatchIt Matrix network networkDynamic Rcpp RcppArmadillo sna SparseM viridis]; }; netgen = derive2 { name="netgen"; version="1.3"; sha256="1iywpl9n1yplnd38dff8m9mz1vlfbvplw393grhpav5czcknj160"; depends=[BBmisc checkmate ggplot2 igraph lhs lpSolve mvtnorm stringr]; }; netgsa = derive2 { name="netgsa"; version="3.0"; sha256="0cqyiilpxhdi6zmibn85y1aqwpcs1aialz34klakmllzn6kvdsng"; depends=[corpcor glasso glmnet igraph Matrix]; }; - netgwas = derive2 { name="netgwas"; version="1.5.0"; sha256="0ixdk602v58ii4awrvj63j0zn90z3csc0lcwajfa8j8ymryc0hgs"; depends=[glasso huge igraph MASS Matrix RBGL tmvtnorm]; }; - netjack = derive2 { name="netjack"; version="1.0.0"; sha256="016byr8qsmmiyk5wdafn809w2sc71mav7jdxyg4cs48gzp7zslpp"; depends=[brainGraph ggplot2 igraph Rdpack]; }; + netgwas = derive2 { name="netgwas"; version="1.7.0"; sha256="1jyn0i3i5pjvik9jpgyd9sd28p0ln1xh5nxzssw3nynp4hyqmvix"; depends=[glasso huge igraph MASS Matrix qtl RBGL tmvtnorm]; }; + netjack = derive2 { name="netjack"; version="1.1.1"; sha256="0pb9phfdjfp8yxlv5p0qb6vxhh8vb9iviffzrbj8x8dy3y3c9vp5"; depends=[brainGraph ggplot2 igraph Rdpack]; }; netmeta = derive2 { name="netmeta"; version="0.9-8"; sha256="0bkfxdz14lg9r51ykwmkmpm6vhbvly35hrcgj6f26g36ihagjksd"; depends=[magic MASS meta]; }; - netrankr = derive2 { name="netrankr"; version="0.2.0"; sha256="1y56y5wv95d7mmjf8rrwr7cs0k64h9a2qbpind4xp0kakpjihn7m"; depends=[igraph Rcpp RcppArmadillo]; }; - netregR = derive2 { name="netregR"; version="0.3.1"; sha256="0ki0ywnwjba53bram4dxxdxx631b0rywp1rjgj83nvdbg3mdcp7x"; depends=[Matrix]; }; + netrankr = derive2 { name="netrankr"; version="0.2.1"; sha256="0csgi09ijp7ygwk7x057l9xjrzyhr7sav8hamh0p6i72l6719ssl"; depends=[igraph Rcpp RcppArmadillo]; }; + netregR = derive2 { name="netregR"; version="1.0.1"; sha256="0n5absjra0imddz1spy1piij5rdz76wi4g568yby3rbhkm1896rs"; depends=[Matrix]; }; nets = derive2 { name="nets"; version="0.9"; sha256="1wcr0fj50w3rqxw0k9cb81c2psdkb0dwwwzrjvxv50hksbhyi8kn"; depends=[igraph]; }; network = derive2 { name="network"; version="1.13.0.1"; sha256="1bbkbqkqf1d7irfwh08c13c2pfypir1ssvlqrln83irqns1ikdv0"; depends=[]; }; networkD3 = derive2 { name="networkD3"; version="0.4"; sha256="02wxki67drppgfka1is1ykg1f2rxf0x0657c0crj7ipfy62jbf1k"; depends=[htmlwidgets igraph magrittr]; }; @@ -9015,32 +9403,35 @@ in with self; { neutralitytestr = derive2 { name="neutralitytestr"; version="0.0.2"; sha256="1p1zjc3fiphkxflsyzrxx8af98aa0gp9pvby63mmrsjb0z7ps948"; depends=[cowplot dplyr ggplot2 ggpmisc pracma scales]; }; neverhpfilter = derive2 { name="neverhpfilter"; version="0.2-0"; sha256="0m4gbqnjw2nmhf25svznlf6pd0b0mslk52lpirmlj1iv04w1aq1i"; depends=[xts zoo]; }; newTestSurvRec = derive2 { name="newTestSurvRec"; version="1.0.2"; sha256="06p782md33wqh5wa1735yg5i01d42p74kl7h5qhqs9cd732ls6pz"; depends=[]; }; + newsmap = derive2 { name="newsmap"; version="0.6"; sha256="1zcpwh8v7lswg0anjhjq8hmz8z9rjmvlyrh6jr5p01sj53mv9sha"; depends=[Matrix quanteda stringi]; }; ngram = derive2 { name="ngram"; version="3.0.4"; sha256="1q4y64dy7vcjikbfx20fpdiy1kwvxay4y90xr5j8d8zkqnva0way"; depends=[]; }; ngramrr = derive2 { name="ngramrr"; version="0.2.0"; sha256="1p8s4p3h27g647rxx9qjfad5dzbngjbmvhw4gz0jbsmfqrsf72by"; depends=[tau tm]; }; ngspatial = derive2 { name="ngspatial"; version="1.2-1"; sha256="1c65ws9b9s2grr44lqg8026c4p2875d0426dfmrakpb44mw2zppp"; depends=[batchmeans Rcpp RcppArmadillo]; }; ngstk = derive2 { name="ngstk"; version="0.2.1"; sha256="12zpl20i07d1f9navs9jjrialfh798wrfn1241j7s9h3rd6xi40l"; depends=[configr data_table stringr]; }; - nhanesA = derive2 { name="nhanesA"; version="0.6.4.4"; sha256="0vl8bg718fk97x3yrjkg48hj3lap4gzhri53gzcwz9g4rfyrlwxp"; depends=[Hmisc magrittr plyr rvest stringr xml2]; }; + nhanesA = derive2 { name="nhanesA"; version="0.6.5"; sha256="0bb53s379qrm8xqp4bsi5vgk6v6hvwadzjv09pvdp1n45z7rqj86"; depends=[Hmisc magrittr plyr rvest stringr xml2]; }; nhlscrapr = derive2 { name="nhlscrapr"; version="1.8.1"; sha256="107k063279w9cy6in99rn03w2rq42ci8s6dvb9x6f9w7y3bdpvzn"; depends=[biglm bitops RCurl rjson]; }; nhstplot = derive2 { name="nhstplot"; version="1.0.1"; sha256="1f07gfmbx80as54mlzdbs2z1vzc78rjy6i6m7zd4jplgcqdcynws"; depends=[ggplot2]; }; nice = derive2 { name="nice"; version="0.4-1"; sha256="1p8vmimiq9sbjvbx6c2wqwwkpnzw4kkdvjry6qyadmm3frwhj5qb"; depends=[]; }; nicheROVER = derive2 { name="nicheROVER"; version="1.0"; sha256="0sa7wfpzkin78vz48vwa5iac82v5l1s3zczdxz8sc2kyg22fj0aw"; depends=[mvtnorm]; }; - nilde = derive2 { name="nilde"; version="1.1-1"; sha256="09r8xfwpz243xmb5l33fw7wf09lw5q9m57anqd2n5wrxfqzzz57h"; depends=[]; }; + nilde = derive2 { name="nilde"; version="1.1-2"; sha256="07m52c4gw0vcyb6pya5z7m4y1kiy2zvh0gnhp80hxc7nhyx0rnqd"; depends=[]; }; nima = derive2 { name="nima"; version="0.5.0"; sha256="1xpzq1mg2l9hnh83hbmxcqz3v0ai62ii7k688i8lpj0xnpsm25pl"; depends=[assertthat devtools ggplot2 ggthemes gridExtra gtools plyr ProjectTemplate scales survival]; }; - nimble = derive2 { name="nimble"; version="0.6-11"; sha256="12vprr5snz05y3k4lq7x51yz1q4crwx5cn42dvbnff4pf7kpj218"; depends=[coda igraph R6]; }; - nipals = derive2 { name="nipals"; version="0.4"; sha256="0h9jxmj44x3lllxk1y2izkslafbiab175qrsxlnfcvhnaj13zsds"; depends=[]; }; + nimble = derive2 { name="nimble"; version="0.6-12"; sha256="1vgyqrcki9z60sxqfyj6smqrq2422g9g95fv5gmmqiwqiv89blxj"; depends=[coda igraph R6]; }; + nipals = derive2 { name="nipals"; version="0.5"; sha256="1zrn1ykl9scd988wj3mm0j6g5q6lq04iwn2ibgap1lrsd0rw1zbf"; depends=[]; }; nitrcbot = derive2 { name="nitrcbot"; version="1.2"; sha256="0lainbw9j5aj9s824afpxdjl3q2f728jfpdfji7kpi9hdg8jixhx"; depends=[dplyr httr jsonlite RCurl]; }; nivm = derive2 { name="nivm"; version="0.3"; sha256="111jkgirgsl1j36xgwi81wzwxial3vdw8mqzi1faldxxd9a2cixm"; depends=[bpcp ssanv]; }; nlWaldTest = derive2 { name="nlWaldTest"; version="1.1.3"; sha256="1cppdz8qvigjdz4sgr1gm2j09zi407xxmryc28zc7ps7rvgy344h"; depends=[]; }; + nlaR = derive2 { name="nlaR"; version="0.3"; sha256="1s54dpz6z7pgj6jn0jjx8s1m318fbk6ra8wrzfvfbz9bcvgp0i2m"; depends=[rappdirs]; }; nlcv = derive2 { name="nlcv"; version="0.3.5"; sha256="1ywnm8a13ifqa1bxnf659h1j6mg9iy02vaszyh9p966ps9c1pjab"; depends=[a4Core Biobase e1071 ipred kernlab limma MASS MLInterfaces multtest pamr randomForest RColorBrewer ROCR xtable]; }; nleqslv = derive2 { name="nleqslv"; version="3.3.2"; sha256="1v9znvncyigw9r25wx2ma0b7ib179b488dl0qsrhp5zrcz7mcjgm"; depends=[]; }; + nlgeocoder = derive2 { name="nlgeocoder"; version="0.1.3"; sha256="13d30kfgfsny5gnn3yjfnclky6yixaa8sg0m689rszqxrvbrj79x"; depends=[jsonlite]; }; nlirms = derive2 { name="nlirms"; version="3.4.4"; sha256="1njyfip377a0f6hf9y32s077b4jv4h8ydbjgnl68yfypxbfn2xyx"; depends=[gridExtra gtable]; }; nlme = derive2 { name="nlme"; version="3.1-137"; sha256="11vyxxc0n36vb8d8g02zr0402ymicvbifwdsqm7gy9iqqnwrn101"; depends=[lattice]; }; nlmeODE = derive2 { name="nlmeODE"; version="1.1"; sha256="1zp1p98mzbfxidl87yrj2i9m21zlfp622dfnmyg8f2pyijhhn0y2"; depends=[deSolve lattice nlme]; }; nlmeU = derive2 { name="nlmeU"; version="0.70-3"; sha256="05kxymgybziiijpb17bhcd9aq4awmp5km67l2py9ypakivi0hc6l"; depends=[nlme]; }; - nlmixr = derive2 { name="nlmixr"; version="0.9.1-3"; sha256="0pl9dm09wc4wa0y64ncqcrrarmimahgcdzf1hz09aj5r5l5pvfvd"; depends=[BH brew cli crayon dparser fastGHQuad ggplot2 lattice lbfgs magrittr Matrix memoise minqa n1qn1 nlme numDeriv PreciseSums R_utils Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders vpc]; }; + nlmixr = derive2 { name="nlmixr"; version="1.0.0-7"; sha256="1ibj2cxf09jnsf08idrd9q0fxg34i2wp56i4f6q4rq21aswh92qd"; depends=[BH brew cli crayon dparser fastGHQuad ggplot2 lattice lbfgs magrittr Matrix memoise minqa n1qn1 nlme numDeriv PreciseSums R_utils Rcpp RcppArmadillo RcppEigen rex RxODE StanHeaders tidyr vpc]; }; nlmrt = derive2 { name="nlmrt"; version="2016.3.2"; sha256="1g0qq0a933ay65gkp04qgn2wqk6vw79pj2a228c2ski4rcmkjxyn"; depends=[]; }; nlnet = derive2 { name="nlnet"; version="1.2"; sha256="00lcyz5csjj9qbhh7yw0qlbnyv32k0c2dpm23v04n9wkdgs67jy0"; depends=[coin e1071 earth fdrtool igraph randomForest ROCR TSP]; }; - nloptr = derive2 { name="nloptr"; version="1.0.4"; sha256="1cypz91z28vhvwq2rzqjrbdc6a2lvfr2g16vid2sax618q6ai089"; depends=[]; }; + nloptr = derive2 { name="nloptr"; version="1.2.1"; sha256="15yz60kljxwnhm2m3gryjzxl3ynhkhd5jiwc179b1hz6rlzf71hz"; depends=[]; }; nlr = derive2 { name="nlr"; version="0.1-1"; sha256="12j2hp5fgpdz7pvlpykhf9zp1sw1f6vzhh5ykk9b2diaf3l55zsl"; depends=[GA MASS nlme quantreg robcor TSA tseries]; }; nlreg = derive2 { name="nlreg"; version="1.2-2.1"; sha256="08pz3qycnsvz175ppj23i2i0wcif6imi6fc117n8802ln3npwm64"; depends=[statmod survival]; }; nlrr = derive2 { name="nlrr"; version="0.1"; sha256="09wm8s5sadkhkq9pb3fjk66cb2xn8py46w1d7yp7fjhczh31bjsq"; depends=[Hmisc rms]; }; @@ -9053,44 +9444,44 @@ in with self; { nlsmsn = derive2 { name="nlsmsn"; version="0.0-4"; sha256="1gvpy8rq020l64bdw6n7kv354l7gwa2rgxarm6k0mqq7z21fxf58"; depends=[]; }; nlsr = derive2 { name="nlsr"; version="2018.1.28"; sha256="113g656j6zqdqip6dw55pimmwq36xrxgfyix10y3qqn9lxvqrpqq"; depends=[digest]; }; nlsrk = derive2 { name="nlsrk"; version="1.1"; sha256="0yqcsz5pdhqsrd86g0yx8bdac13fbmvg89phj3v4qvla2jfznjba"; depends=[]; }; - nlstimedist = derive2 { name="nlstimedist"; version="1.1.1"; sha256="1222vj2w4f8xh7fkrzlyarr7980a6wj047p5p0nw3cfna3mmhi5b"; depends=[broom dplyr ggplot2 lazyeval minpack_lm nlstools]; }; + nlstimedist = derive2 { name="nlstimedist"; version="1.1.3"; sha256="0wjf18fcm5w82sqza3nmwvqvd14zidvdf72wvkbgfjk4vgcrqj5l"; depends=[broom dplyr ggplot2 lazyeval minpack_lm nlstools]; }; nlstools = derive2 { name="nlstools"; version="1.0-2"; sha256="0mjn1j9fqqgr3qgdr0ki4lfbd0yrkanvya4y2483q3wklqa6qvjc"; depends=[]; }; - nlt = derive2 { name="nlt"; version="2.1-3"; sha256="1j0xrrbr1hvfda8rvnc17lj96m6cz24faxvwn68ilf7j1ab2lkgn"; depends=[adlift EbayesThresh]; }; - nlts = derive2 { name="nlts"; version="0.2-2"; sha256="0bx6xqa3j0k01p43vnv5lcv2pryjzgsak77y1cr9rm2xwqa3j6az"; depends=[acepack locfit]; }; - nmaINLA = derive2 { name="nmaINLA"; version="0.1.1"; sha256="0976jafmdhy2rz5fcarb7hh1vaanm8l2610hk06f5k93xjhypg8j"; depends=[]; }; + nlt = derive2 { name="nlt"; version="2.2-1"; sha256="10wf00qzf28dxjfvv12wsqxlfn6xz15wk8njrzgsgm9px1g6s21f"; depends=[adlift EbayesThresh]; }; + nlts = derive2 { name="nlts"; version="1.0-2"; sha256="0s49qjwavl9ns2746nn4zy4h4dh0njfcvznm3qd61qhs7np9w1db"; depends=[acepack locfit]; }; + nmaINLA = derive2 { name="nmaINLA"; version="0.1.2"; sha256="0layk1pqry2g3xiwmasrnsvmw91sgg7iz15d6iz6hbq4za61hr0k"; depends=[]; }; nmathresh = derive2 { name="nmathresh"; version="0.1.3"; sha256="09pxbizmvdp2l5j1gs0v3xk2lsyclx5rndaw6b4ccn61m3x060ls"; depends=[ggplot2 gridExtra gtable Matrix nnls]; }; nmfem = derive2 { name="nmfem"; version="1.0.3"; sha256="1v808k25g0ph1wvx1j89izfxy9szn0m4sf965d8nkygrk184i9gj"; depends=[d3heatmap dplyr mixtools plyr tidyr]; }; nmfgpu4R = derive2 { name="nmfgpu4R"; version="0.2.5.2"; sha256="05066rgbbp6kj2d67nzf3d1pf32gypz9ammz4ba88yxblydb3cwk"; depends=[Matrix Rcpp SparseM stringr]; }; nmixgof = derive2 { name="nmixgof"; version="0.1.0"; sha256="0cbwrsxrcf8pn4ycn6r0z8jdidw5l6kdvwyrks69fq4pjzx988d6"; depends=[Rcpp unmarked]; }; - nmslibR = derive2 { name="nmslibR"; version="1.0.2"; sha256="1ya3dqnkrlvpil2nypcl3pp6f3x20ip40avnrbqgbylak7yqg9yw"; depends=[KernelKnn Matrix R6 Rcpp RcppArmadillo reticulate]; }; + nmslibR = derive2 { name="nmslibR"; version="1.0.3"; sha256="1m3bq0vg774kqragdx1ydm4q2if3yn9llbd6ybv3c8bmbdb9h405"; depends=[KernelKnn Matrix R6 Rcpp RcppArmadillo reticulate]; }; nmw = derive2 { name="nmw"; version="0.1.4"; sha256="1vj7b2p40x0h3xp45qzar86i9439mj8y3r5hnlbwa025jqdf2g0q"; depends=[numDeriv]; }; - nnTensor = derive2 { name="nnTensor"; version="0.99.1"; sha256="0ai3mqyw24mwl6gcz2jmlvfv59y937n675gram1ajwxdlx76fxff"; depends=[fields plot3D rTensor tagcloud]; }; + nnTensor = derive2 { name="nnTensor"; version="0.99.4"; sha256="1z5dafcnj9cnslxljij5ycmzagvvp27z8b7p6i3hz134z4vbx5jb"; depends=[fields plot3D rTensor tagcloud]; }; nna = derive2 { name="nna"; version="0.0.2.1"; sha256="17cz1jf7iv61wspqldfdwbdjhlr0wq09idkzlivfb8aik5w9f0z5"; depends=[]; }; nneo = derive2 { name="nneo"; version="0.1.0"; sha256="0jaaz15y1csh3bwmzp7mgx86m3f0w3ykzb8qdvg8ak2grxw3wl6a"; depends=[crul data_table fauxpas jsonlite tibble]; }; nnet = derive2 { name="nnet"; version="7.3-12"; sha256="17amqnw9dpap2w8ivx53hxha2xrm0drwfnj32li0xk41hlz548r7"; depends=[]; }; nnetpredint = derive2 { name="nnetpredint"; version="1.2"; sha256="1c6s9wm6vhylwv4xhp2hkllw18zj8hdr17ls9vlxm9qs3wx1v48w"; depends=[RSNNS]; }; nnfor = derive2 { name="nnfor"; version="0.9.2"; sha256="1wxv8s5547spw155rj7nlilsfn5d7m40xpfy87mady93n25pwm3d"; depends=[forecast glmnet MASS neuralnet plotrix]; }; - nngeo = derive2 { name="nngeo"; version="0.1.8"; sha256="0fxiq65kd1q7w95m9hhg18xw3l8czi0li60wkr9h3dakmy2s9j7m"; depends=[geosphere lwgeom RANN Rcpp sf sp units]; }; + nngeo = derive2 { name="nngeo"; version="0.2.2"; sha256="0wjbw1b0ldsl28k3k8i6x0f9msv4a2wwgbvb0wshq0kk0yamanpz"; depends=[geosphere lwgeom RANN Rcpp sf sp units]; }; nnlasso = derive2 { name="nnlasso"; version="0.3"; sha256="1n7karlmgq61z9ywfx9xb5wvmxx40ydpnzzazj1xr70qlv5m0qk4"; depends=[]; }; nnls = derive2 { name="nnls"; version="1.4"; sha256="07vcrrxvswrvfiha6f3ikn640yg0m2b4yd9lkmim1g0jmsmpfp8f"; depends=[]; }; noaastormevents = derive2 { name="noaastormevents"; version="0.1.0"; sha256="1pkfmvp20f6xi2iy7l6c67zspp9f4wkrh7s308hlklms2difhp6m"; depends=[choroplethr choroplethrMaps data_table dplyr forcats ggplot2 htmltab hurricaneexposure lubridate maps plyr RColorBrewer stringr tidyr viridis XML]; }; + nodbi = derive2 { name="nodbi"; version="0.1.0"; sha256="0i82713yhasl5n5zdncpsfplvfm77dvxjvhb4vvlsnfwk364gadf"; depends=[data_table jsonlite]; }; nodeHarvest = derive2 { name="nodeHarvest"; version="0.7-3"; sha256="0nh3g50rk9qzrarpf29kijwkz9v60682i0ag77j2ipyvhhbpwpkc"; depends=[quadprog randomForest]; }; nodiv = derive2 { name="nodiv"; version="1.2.0"; sha256="0bdhlq5nd169hbwnik4z843xzh5bbmahrvyxj54626zxyvf1fmfb"; depends=[ape picante raster sp vegan]; }; nofrills = derive2 { name="nofrills"; version="0.3.0"; sha256="18hryq6clywlr2f45az6ryslkkarly45nacln4bwk6ip0yfl5s98"; depends=[rlang]; }; noia = derive2 { name="noia"; version="0.97.1"; sha256="0yldfmnb4ads4s9v9cj1js8zf1w1hxasqq6qjyzwknmvmp7kh62h"; depends=[]; }; noise = derive2 { name="noise"; version="1.0"; sha256="1a48s9vpz3nc058966lad8hydmg7z0vbzfwcf6nxc9g3c8mw4nig"; depends=[preprocessCore]; }; nomclust = derive2 { name="nomclust"; version="1.1.1106"; sha256="17hb89k72sw3ya0wm3n95mpx4vj7mpl4mzs8qwl2773dh2mcjgjq"; depends=[cluster dummies]; }; - nomine = derive2 { name="nomine"; version="1.0.0"; sha256="1yaxhac002fxcyiz5x562fnhrsq9h9nx0qmw4rykjsc5l2qbi9gd"; depends=[httr RCurl]; }; - nomisr = derive2 { name="nomisr"; version="0.3.0"; sha256="0ia1i3gzp7wp8hf57arajbf7063m4jpbb2hl0l03rwg1z4afb7jd"; depends=[dplyr httr jsonlite readr rlang rsdmx tibble]; }; + nomisr = derive2 { name="nomisr"; version="0.4.0"; sha256="1ns05jpq20ql3pqandfil7zln4b9lls4vpscnaai3mxf9434ga9x"; depends=[dplyr httr jsonlite readr rlang rsdmx tibble]; }; nomogramEx = derive2 { name="nomogramEx"; version="3.0"; sha256="16235rwblnzn8k53817llwy2pzhnpifh6ij159nxymjm8ar9qpbp"; depends=[pracma rms]; }; noncensus = derive2 { name="noncensus"; version="0.1"; sha256="0cfj17bfzddfshhhzv2ijhrp9ylcscmsysswjcsjfxmy3gbkd00q"; depends=[]; }; noncompliance = derive2 { name="noncompliance"; version="0.2.2"; sha256="1lcybgj95z7lz7p26xbsdiv0vvms4ab4f8kad0pclacf1l43v0j6"; depends=[data_table Rcpp]; }; noncomplyR = derive2 { name="noncomplyR"; version="1.0"; sha256="1a9m6r9cizw42nmy24jdsrsbllg5z84fs8b239axnh1fxzskg2qy"; depends=[MCMCpack]; }; nonlinearICP = derive2 { name="nonlinearICP"; version="0.1.2.1"; sha256="1m9a1f0yrbjl0nx2l7r76pyi78b2bxj8v4jx92yga91f975mw6np"; depends=[caTools CondIndTests data_tree randomForest]; }; - nonlinearTseries = derive2 { name="nonlinearTseries"; version="0.2.3"; sha256="1pcah255hh3lqabxgjb5fsaap4s2d92lvxw9a48l1p4dkmm1lbsx"; depends=[Matrix Rcpp rgl TSA tseries]; }; - nonmem2R = derive2 { name="nonmem2R"; version="0.1.9"; sha256="06irvlyhfimcx3izbfivvrxc9xbiwvqajvl5n47krgbkbd4r4ag0"; depends=[ggplot2 lattice latticeExtra MASS mvtnorm]; }; - nonmemica = derive2 { name="nonmemica"; version="0.8.2"; sha256="1nz0sq8a1xgpasii2hpxiz79d501nnfs6awaqpp8m8lviimnhv68"; depends=[csv dplyr encode lazyeval magrittr metaplot rlang spec tidyr xml2]; }; - nonnest2 = derive2 { name="nonnest2"; version="0.5-1"; sha256="02pflg6frvsq7azwcr660qj9mpj4q3kjx6xr6v5lshg77mjfhgdg"; depends=[CompQuadForm lavaan mvtnorm sandwich]; }; + nonlinearTseries = derive2 { name="nonlinearTseries"; version="0.2.5"; sha256="0vpa8r8b7j2d19da49cw4jg8zm74kvg9npwf4aqwxw8ndkfgpyj0"; depends=[Matrix Rcpp RcppArmadillo rgl TSA tseries zoo]; }; + nonmem2R = derive2 { name="nonmem2R"; version="0.1.10"; sha256="05ipdkvryx21kqc2kajy1xmpd9w33k8w0z6zq786kp9ks76pmfrb"; depends=[ggplot2 lattice latticeExtra MASS mvtnorm splines2]; }; + nonmemica = derive2 { name="nonmemica"; version="0.8.3"; sha256="07n6cz2vlg5mk0wvbi86j2v9v12vxpll6zkc6f4nf7cb700r9kwa"; depends=[csv dplyr encode lazyeval magrittr metaplot rlang spec tidyr xml2]; }; + nonnest2 = derive2 { name="nonnest2"; version="0.5-2"; sha256="1bq44qqmm59j91m0sny4xnqmxqlga4cm48qdsw8xfs3x19xwmxk6"; depends=[CompQuadForm lavaan mvtnorm sandwich]; }; nonpar = derive2 { name="nonpar"; version="1.0.1"; sha256="0pxks3nga7jrcvq0pzr1axj3a9xvzky836fl7966a09ws1vff7i4"; depends=[]; }; nonparaeff = derive2 { name="nonparaeff"; version="0.5-8"; sha256="1kkn68m7cqlzx3v539cjxw3x5a2y86lvmyv2k98s87m3yvqg0gdk"; depends=[gdata geometry Hmisc lpSolve psych pwt rms]; }; nonrandom = derive2 { name="nonrandom"; version="1.42"; sha256="0icm23hw593322z41wmjkwxqknh2pa9kpzbrch7xw1mhp93sd5ll"; depends=[lme4]; }; @@ -9102,7 +9493,7 @@ in with self; { nord = derive2 { name="nord"; version="0.0.1"; sha256="0ajymjn2xw7zik62nhjp11g8bkvsqhhsrzi3bl2k70y544wbl3kn"; depends=[ggplot2]; }; nordklimdata1 = derive2 { name="nordklimdata1"; version="1.2"; sha256="0c2hbh3qy8nrs275lxpzfgqsfgwp81m4kv0layvnjj09fcybm54x"; depends=[]; }; norm = derive2 { name="norm"; version="1.0-9.5"; sha256="01j1h412yfjx5r4dd0w8rhlf55997spgb6zd6pawy19rgw0byp1h"; depends=[]; }; - normalp = derive2 { name="normalp"; version="0.7.0"; sha256="1s12x2qln3s4bbqsm4p3cq4g6461z73r858g6ym1awamhbmncnrl"; depends=[]; }; + normalp = derive2 { name="normalp"; version="0.7.0.1"; sha256="1gvbqirvb0q6c3831qqm5x7nj7rls1v7nfj7mf1nmwg5b0ljakp0"; depends=[]; }; normalr = derive2 { name="normalr"; version="1.0.0"; sha256="1ahrg188vbhnrnwag0zi6lcb3g0y1mbz06sl3j1wyllq5l918cc7"; depends=[magrittr MASS purrr rlang shiny]; }; normtest = derive2 { name="normtest"; version="1.1"; sha256="073r2mwfs6c4vqh8921nlyygl0f20nhv997s0iwf00d3jckkc4pp"; depends=[]; }; normwhn_test = derive2 { name="normwhn.test"; version="1.0"; sha256="1kr45bfydk40hgdg24i2f28cdaw65hg9gmsgv4lsvvr2m3r74vi6"; depends=[]; }; @@ -9116,7 +9507,7 @@ in with self; { notifyme = derive2 { name="notifyme"; version="0.3.0"; sha256="0b6xrv6c4id7rs0dafg96pl4brn4yma5xh9wjz78ql44bg3w5s91"; depends=[dplyr httr magrittr]; }; nowcasting = derive2 { name="nowcasting"; version="0.1.3"; sha256="1b74rqz7y4g5zyrbmns27v60jpv13s5aax9dyiyvnk2y7ng1kp5x"; depends=[corpcor DBI httr lubridate magic matlab Matrix RCurl RMySQL xts zoo]; }; noweb = derive2 { name="noweb"; version="1.0-4"; sha256="17s65m1m8bj286l9m2h54a8j799xaqadwfrml11732f8vyrzb191"; depends=[]; }; - np = derive2 { name="np"; version="0.60-8"; sha256="17h67a510wh83800ri6g02wvznrlhigxni8shyijz1iaxcpk8k4j"; depends=[boot cubature quadprog quantreg]; }; + np = derive2 { name="np"; version="0.60-9"; sha256="1z4jcpx8bbgwslv42wrphfd1qfq965qjn0kmfxm5f6hbbycahcgy"; depends=[boot cubature quadprog quantreg]; }; npIntFactRep = derive2 { name="npIntFactRep"; version="1.5"; sha256="14ms66ppzb4jjsa3fparic6gdn913f6wv2ccjyb02j1ahs4iaa4g"; depends=[ez plyr]; }; npROCRegression = derive2 { name="npROCRegression"; version="1.0-5"; sha256="09ngfj0bd9cp19lpwsbknp2y71x36k03ph84bmf67wm1q2na7f93"; depends=[lattice]; }; nparACT = derive2 { name="nparACT"; version="0.8"; sha256="0zwhz52j526n3xd21s7kghjaby56a8g296bkkc6scaa23zn1xg4b"; depends=[ggplot2 stringr zoo]; }; @@ -9130,7 +9521,7 @@ in with self; { nplplot = derive2 { name="nplplot"; version="4.5"; sha256="1dpbs0jb34gv0zj528357z1j2pwahjbp04rm7jir6qk0jhyaxxgh"; depends=[]; }; nplr = derive2 { name="nplr"; version="0.1-7"; sha256="1h3qv9dlw2gx8km3slyvrl588nif1n87df8xwmm6p75ziqhn2f56"; depends=[]; }; npmlda = derive2 { name="npmlda"; version="1.0.0"; sha256="1dr25an7cac89jyb8zhmj3ry6lq7sh7zxci1injplnk4gzy17mc5"; depends=[]; }; - npmlreg = derive2 { name="npmlreg"; version="0.46-3"; sha256="1k1l977g1a86918k6w7h2m8145x7adb8r7q2s4jky8s9ixa14hz3"; depends=[statmod]; }; + npmlreg = derive2 { name="npmlreg"; version="0.46-5"; sha256="1f0bzccmral2y56aih37gmi6mjww6wmp2a8z6yxm501fgj2lgzfc"; depends=[statmod]; }; npmr = derive2 { name="npmr"; version="1.1"; sha256="1ss8ypvv6qcdxv7l3szivliwmhidmzi3572p3nz96ysndf56akl4"; depends=[]; }; npmv = derive2 { name="npmv"; version="2.4.0"; sha256="04lfks2rlax59gxdnbgkpmk2vaax718z6hkgsvmyxf52iby6rvlr"; depends=[Formula]; }; nppbib = derive2 { name="nppbib"; version="1.0-0"; sha256="075jb13zckkh66jwdmdlq4d2drjcc3lkj26px3w79b91223yymf2"; depends=[]; }; @@ -9138,7 +9529,8 @@ in with self; { npregfast = derive2 { name="npregfast"; version="1.5.1"; sha256="0s9ci3nybzwykrgi9z2rqp6l15mqbxf759ks0clvkbm7wxv3whk5"; depends=[doParallel foreach ggplot2 mgcv sfsmisc shiny shinyjs wesanderson]; }; nprobust = derive2 { name="nprobust"; version="0.1.3"; sha256="1zr89myhamcxzk7j04rxcc4mbi86pf09kl70p8niklm0b3wmsjzj"; depends=[ggplot2 Rcpp RcppArmadillo]; }; nproc = derive2 { name="nproc"; version="2.1.1"; sha256="0wpny7c1n9mmv1yywlws8gjbidkrikvcqcckrxpba9avjw2c5df8"; depends=[ada e1071 glmnet MASS naivebayes randomForest ROCR tree]; }; - npsf = derive2 { name="npsf"; version="0.3.1"; sha256="1mv2dzn3gc7b9ynpw8dv22xd31igg4hmkgrds12n9920pghkya44"; depends=[Formula Rcpp]; }; + nprotreg = derive2 { name="nprotreg"; version="1.0.0"; sha256="06n82i5m7sgfj759zdwwh8fqybkbchvnaaqcds64m6hbms592bh3"; depends=[expm]; }; + npsf = derive2 { name="npsf"; version="0.4.1"; sha256="0vl02ysfmbxfzzbrjhiz8j129waz9cnpmds978fmv08l6wsjr3mi"; depends=[Formula Rcpp]; }; npsm = derive2 { name="npsm"; version="0.5"; sha256="12jq6ygp3di5rknh7izrr3bxvpn6bqnj3jhfxzf29yf0bd86hzqk"; depends=[plyr Rfit]; }; npsp = derive2 { name="npsp"; version="0.5-3"; sha256="0ck6iymfc73bzrifdc2sagcliz1yakqk1yv67a3ykha996jsrx99"; depends=[quadprog]; }; npsr = derive2 { name="npsr"; version="0.1.1"; sha256="1fzvilzjg9z05991sr1s1bdp17kfl6d1580qdllk8is9ac06np0v"; depends=[gmp infotheo MASS]; }; @@ -9146,29 +9538,31 @@ in with self; { npsurv = derive2 { name="npsurv"; version="0.4-0"; sha256="1wq4c9yfha5azjhrn40iiqkshmvh611sa90jp3lh82n4bl9zfk20"; depends=[lsei]; }; nricens = derive2 { name="nricens"; version="1.6"; sha256="0fpgp6k3mhb0qxbx6248k9bscnmlzwj70mqh631a1nc4cpdjvw3q"; depends=[survival]; }; nsRFA = derive2 { name="nsRFA"; version="0.7-14"; sha256="0sd3br2a5jf6mqbxk8s2i7px9vi9bk3pl8bd5884k40xqcj77irs"; depends=[]; }; - nsROC = derive2 { name="nsROC"; version="1.0"; sha256="0c99z8kknbrnbyyv7p79sj848aq7b5n4m4r7v1yrcs61ackrdn2n"; depends=[sde survival]; }; + nsROC = derive2 { name="nsROC"; version="1.1"; sha256="1fi7k61fja98kpn528jprjdycwz01rnqm368m82anxh21k7q4s1m"; depends=[sde survival]; }; + nsapi = derive2 { name="nsapi"; version="0.1.1"; sha256="06xf2p6f911vwpzky47r35fjgjvlhp13p9pf1zlvjrv66kdw8vbp"; depends=[crul xml2]; }; nscancor = derive2 { name="nscancor"; version="0.6.1-25"; sha256="183kvzlln5lhmi51dm0skq1165c3hhy1yz5h2g7nxwqk2b4p23xj"; depends=[]; }; nscprepr = derive2 { name="nscprepr"; version="0.1.1"; sha256="1rd32zywrzyxz6hpn9s6cwjlg8q8rz3cc0p3b5gan8bicx0ilwjc"; depends=[dplyr lubridate stringr]; }; - nse = derive2 { name="nse"; version="1-00.17"; sha256="16zam539ir29m9ixyim9bqnf3sdy8aaaaly3wf96i3csgysf8pjc"; depends=[coda mcmc mcmcse np Rcpp sandwich sapa]; }; + nse = derive2 { name="nse"; version="1.19"; sha256="107ri9325ga4kgvs5a3j3698dc3m4v28cb02ypc4dan6f3fa9h8i"; depends=[coda mcmc mcmcse np Rcpp sandwich]; }; + nseval = derive2 { name="nseval"; version="0.4"; sha256="18avir5zllvm2sbi9616k7dlb8yxhvnbji7xshr4kcfvy1fvn2ia"; depends=[]; }; nsga2R = derive2 { name="nsga2R"; version="1.0"; sha256="04jj0a3isfc348vg46il5x9l33cr7xawz5w0mm4pwr6djhd8nfhx"; depends=[mco]; }; nsgp = derive2 { name="nsgp"; version="1.0.5"; sha256="0piajjz3r71dnjw7lwpjhbaygxcrbbxfvhf8p3n2izyr2pw5fml9"; depends=[MASS]; }; nspmix = derive2 { name="nspmix"; version="1.4-0"; sha256="1cd133ncnr4g0n6w4c44q6mda8y1n7cfmsgy1x1kczvwp7cm9kk2"; depends=[lsei]; }; nsprcomp = derive2 { name="nsprcomp"; version="0.5.1-2"; sha256="1zlc1ximx96f235c0l8qfs6vbp1kpnbf943wxsfahnnlnxvwi59f"; depends=[]; }; - nucim = derive2 { name="nucim"; version="1.0.0"; sha256="0fyapw6f5wkybr4mwmqpk9wy349j5sa4q26pci1bsy4ly2wf9wx6"; depends=[bioimagetools EBImage fields stringr]; }; - nullabor = derive2 { name="nullabor"; version="0.3.1"; sha256="0anwla6x9y2i7yd6r0yi1xhy0zfqwfpp5h1f18gji11nmiva9d81"; depends=[dplyr fpc ggplot2 MASS moments plyr]; }; + nucim = derive2 { name="nucim"; version="1.0.6"; sha256="0bw9a2xz2w5jlr2qlbia6jfm2yp09n3gzg8a630p1ks75xvlmkbx"; depends=[bioimagetools EBImage fields stringr]; }; + nullabor = derive2 { name="nullabor"; version="0.3.5"; sha256="0hnrawf8s2g0xjc9kh2p3pbdnbai7q71z7arab5mnrz6qbiyym34"; depends=[dplyr forecast fpc ggplot2 magrittr MASS moments purrr rlang tibble tidyr tidyverse tsibble]; }; numDeriv = derive2 { name="numDeriv"; version="2016.8-1"; sha256="07ni52rwiap4wilfz94w5mrqaxr59axxmgn57857ip4p6qkiss0v"; depends=[]; }; numGen = derive2 { name="numGen"; version="0.1.1"; sha256="1y41wq31r8126dz1sj23smq2k6v9yqczq4ddgzqb73dsrx9dmmc0"; depends=[]; }; numKM = derive2 { name="numKM"; version="0.1.0"; sha256="0pnwb7skp5jx5ibgfkympq59m9sf71gvk5zc0fwik539vrzfykdf"; depends=[survival]; }; - numOSL = derive2 { name="numOSL"; version="2.5"; sha256="0wrddd5yvilp66p2m9jbchd0spb55zgl3k63zf3yq3dc8jdrvzvy"; depends=[]; }; + numOSL = derive2 { name="numOSL"; version="2.6"; sha256="03h1p56650x4my5vq5jlmjsz5xj0w2j75qfr08rh7nr38dwgp1k8"; depends=[]; }; numbers = derive2 { name="numbers"; version="0.7-1"; sha256="1k5a24pnjhn3h330q0s7ivk2v5dsjmg2xwlhfinzixihnwhc12xy"; depends=[]; }; numbersBR = derive2 { name="numbersBR"; version="0.0.2"; sha256="0ihxlny745gpz1ngq862rydn1zwn8zni1xw9mmgw8hkylsrnjfq8"; depends=[stringr]; }; numform = derive2 { name="numform"; version="0.4.0"; sha256="09vim4ajnnkdf27ag5j8pj7p8qyfakfh3ar1dki8bqzms2d7bkcm"; depends=[]; }; nutshell = derive2 { name="nutshell"; version="2.0"; sha256="1v11g5wqyxnj29b7akl0cwa34hcqs79ijbiv735pg3df4ggyrzvm"; depends=[nutshell_audioscrobbler nutshell_bbdb]; }; nutshell_audioscrobbler = derive2 { name="nutshell.audioscrobbler"; version="1.0"; sha256="10fvc5d22gnfb0bkgbww48f0vvcaja96g5gfv85kap939j11172j"; depends=[]; }; nutshell_bbdb = derive2 { name="nutshell.bbdb"; version="1.0"; sha256="19c4047rjahyh6wa6kcf82pj09smskskvhka9lnpchj13br8rizw"; depends=[]; }; + nvmix = derive2 { name="nvmix"; version="0.0-1"; sha256="13pp664n5f06gavny586xrwm1n18jndr0hlqx5fdy68n6py0vz9r"; depends=[qrng]; }; nws = derive2 { name="nws"; version="1.7.0.1"; sha256="1fn92n6brjhh8hpvhax7211cphx2cn0rl99kjqksig6z7242c316"; depends=[]; }; nycflights13 = derive2 { name="nycflights13"; version="1.0.0"; sha256="10b05cxpiysvlif59lriprxcyhgk59d3qmcpwwzk88wy6bicl9hn"; depends=[tibble]; }; - nyctaxi = derive2 { name="nyctaxi"; version="0.0.1"; sha256="187fs819g45f8irx2s9bgwnzr00lyamfv2ra88kyb8q2cq1icwwy"; depends=[DBI dplyr etl rlang stringr]; }; nzelect = derive2 { name="nzelect"; version="0.4.0"; sha256="19kcbq454yg9g76ix7v3nibgw2203d7vv6f2d6d2zkcc0h08bjm7"; depends=[]; }; nzpullover = derive2 { name="nzpullover"; version="0.3.0"; sha256="0b3mz5i58m48fa1x7gv4l3gqj0gvrar201ph2l1gkbcnfmazwjp8"; depends=[]; }; oXim = derive2 { name="oXim"; version="1.2.2"; sha256="1hi4ps36amvgqgj64yc3cvy4sx32z1az6lk5yy1sciy6074k5byb"; depends=[gstat imagine R_matlab sp]; }; @@ -9188,24 +9582,26 @@ in with self; { observer = derive2 { name="observer"; version="0.1.2"; sha256="1027827k57qb4xppx0xxxffd1s3n7pz754irdx3v1v3piix8xi8m"; depends=[bazar bit dplyr lazyeval magrittr tibble]; }; oc = derive2 { name="oc"; version="1.01"; sha256="12idrh4jxxq28lgqzr6jzgrvmmwysh5amzhmmaqn3yz49i17gcaf"; depends=[pscl]; }; occ = derive2 { name="occ"; version="1.1"; sha256="1aka29qqwbd494kvi15yyyqkb9hks4ky2gcvykxhx2drm2fnsn4g"; depends=[]; }; - oce = derive2 { name="oce"; version="0.9-23"; sha256="0k5h6k4y9bas2aqwkh1dkxmwgx4d41hxy87zfih5iq8ff61d03rr"; depends=[gsw testthat]; }; + oce = derive2 { name="oce"; version="1.0-1"; sha256="0wn49xp7zvfipxvx0jdbqqldinbq0ccsqipljsidc3gzhf7jh67p"; depends=[gsw Rcpp testthat]; }; oceanmap = derive2 { name="oceanmap"; version="0.1.0"; sha256="1kkjc213nn2ks7cqzchbmjvyp9hci8qndv8migpmyf5vjbm7d297"; depends=[abind extrafont fields lubridate mapdata maps maptools ncdf4 plotrix raster sp]; }; ocedata = derive2 { name="ocedata"; version="0.1.3"; sha256="0lzsyaz8zb6kiw86fnaav2g2wfdhyicxvm81ly5a9z4mjch3qj02"; depends=[]; }; ockc = derive2 { name="ockc"; version="1.0"; sha256="0chzrs3ipa2518r4d35z4fxffgq12p1mwj0hzkxw19gdgq6aa8s7"; depends=[flexclust modeltools]; }; ocomposition = derive2 { name="ocomposition"; version="1.1"; sha256="0fk8ia95yjlvyvmjw7qg72piqa40kcqq9wlb3flc6a81pys1ycb5"; depends=[bayesm coda]; }; odbc = derive2 { name="odbc"; version="1.1.6"; sha256="146phrsks0hfd1bfxx452kkq7ximk3fwjz9lqg9fdykar5sr6vjj"; depends=[BH bit64 blob DBI hms Rcpp]; }; odds_converter = derive2 { name="odds.converter"; version="1.4.8"; sha256="09s8pg55gpsxmrbimzg5rsr1n07la93781sar6vab5p9zn9zxgx4"; depends=[]; }; - oddsratio = derive2 { name="oddsratio"; version="1.0.2"; sha256="0s9w5iqcabkc7lqdh27nmg7xnw2jpwik5djjlqxb6xgabzls97d6"; depends=[cowplot ggplot2 MASS mgcv]; }; + oddsratio = derive2 { name="oddsratio"; version="1.0.3"; sha256="1kdqnai8hbhxg9gjn9j7zgm8mw4bd765jkdrwrk9q65fpvc62f5k"; depends=[cowplot ggplot2 MASS mgcv]; }; odeintr = derive2 { name="odeintr"; version="1.7.1"; sha256="0wfb5lgv10p0qyfbn9hdg14bda37v43lpgbwv6nbw63zzbsbazqi"; depends=[BH Rcpp]; }; odk = derive2 { name="odk"; version="1.5"; sha256="0fcnr4c1clwx1sk6fgg4cx506gdi90n2h05g0i47p4s5bra0qwwl"; depends=[gsheet openxlsx]; }; - odpc = derive2 { name="odpc"; version="1.0.0"; sha256="1mhak9drp0a7h1yrbk08cs00hbvkfkj8r1y6klhr40sdych4q506"; depends=[forecast gdpc Rcpp RcppArmadillo]; }; - odr = derive2 { name="odr"; version="0.7.3"; sha256="07jfd809wv92ijgw1r1nq9516zi2rkf3ik243br42glf6lszn19p"; depends=[]; }; + odpc = derive2 { name="odpc"; version="2.0.0"; sha256="1lpd7x2vq8qdgf0nag0sqzf1jpbig52zr3glk17n7cl50v2m19ii"; depends=[doParallel foreach forecast Rcpp RcppArmadillo]; }; + odr = derive2 { name="odr"; version="1.0.0"; sha256="0niadinljx5pph329dgixivdc9s1l27ik9755fbfhmplhj92ihi2"; depends=[]; }; oec = derive2 { name="oec"; version="2.7.8"; sha256="0qi5xkyh5xgwcivihnc9wv96lzhdzlcz4zv08pvpxf7dx1qhafrj"; depends=[curl dplyr jsonlite magrittr purrr readr rlang stringr]; }; oem = derive2 { name="oem"; version="2.0.8"; sha256="08j9y9vq31skvdpg0kyqj50d77aijd2d95vcwm92df5vcvw9bpwz"; depends=[BH bigmemory foreach Matrix Rcpp RcppArmadillo RcppEigen]; }; - officer = derive2 { name="officer"; version="0.3.1"; sha256="1qpy2srk4sqmnqmpaivgp5j5nc3b58mjbibzkq5nw784jni13jmj"; depends=[base64enc digest htmltools magrittr R6 Rcpp uuid xml2 zip]; }; + ofGEM = derive2 { name="ofGEM"; version="1.0"; sha256="0xdkl8k12an9pdy6i5nay4m2iakrwsp0lr3zl8gphii75j0ywz7k"; depends=[CompQuadForm forestplot MASS]; }; + officer = derive2 { name="officer"; version="0.3.2"; sha256="14b6ii9h3fi5g8ja929mfhxps9r7x78flqjdy437y9aygkhmiz2i"; depends=[base64enc digest htmltools magrittr R6 Rcpp uuid xml2 zip]; }; oglmx = derive2 { name="oglmx"; version="3.0.0.0"; sha256="13axmhbqhv4kkcdsdmp9r7p0d0kyqlsaqgyyllbkxlxb4hfz79b6"; depends=[maxLik]; }; - ohtadstats = derive2 { name="ohtadstats"; version="1.1.1"; sha256="1d011xcrn9zhb4pf9wkwlynvz3kkk95yk2l5qs352ra1dhki7b6k"; depends=[lattice]; }; + ohtadstats = derive2 { name="ohtadstats"; version="2.0.0"; sha256="0vi0hi90l8p80kf0769iidlaq9j11myhxrj41lvxr70q4h4slr8j"; depends=[lattice]; }; oii = derive2 { name="oii"; version="1.0.2.1"; sha256="1n41hikn53ikyynsravg127cw5csa8s0s1l63w5hym7c6j625ya5"; depends=[Deducer gmodels rapportools]; }; + ojUtils = derive2 { name="ojUtils"; version="0.1.0"; sha256="0q1w99wfahi8n2278njbxk3qn3xd6q2rhqr7afc904x9xpxadazc"; depends=[Rcpp testthat]; }; okcupiddata = derive2 { name="okcupiddata"; version="0.1.0"; sha256="1l04rr4yr73a6q2am9ylyr5prf347hkf2jx735w78rsb6472kbaq"; depends=[]; }; okmesonet = derive2 { name="okmesonet"; version="0.1.5"; sha256="1kzyzmg702ayzphn9jsk64m51mlnz37ylxiwq5gsr23vaiida680"; depends=[plyr]; }; olctools = derive2 { name="olctools"; version="0.3.0"; sha256="1gbchwynvmryarz32f24v56kj57h7x6nrrm878fkjkpq140cqwzz"; depends=[Rcpp]; }; @@ -9214,10 +9610,11 @@ in with self; { omics = derive2 { name="omics"; version="0.1-5"; sha256="1y2x33mfgq98nglhvpr1wq1v6nfiq4njy2yac47x72rpwxsj9vb1"; depends=[lme4 pheatmap]; }; ompr = derive2 { name="ompr"; version="0.8.0"; sha256="1nmd5wa1g2xzmwqfqf882bxcrmkxbb5b414cbbzvmqzfs34yk6bl"; depends=[data_table lazyeval Matrix progress Rcpp rlang]; }; ompr_roi = derive2 { name="ompr.roi"; version="0.8.0"; sha256="1cbrchvpd31lxpxvw2l3q9k5jmffarb1shca8kwm76y5a6zxxq63"; depends=[Matrix ompr ROI slam]; }; + omu = derive2 { name="omu"; version="1.0.2"; sha256="03mj5xk447gadsnvqrm97cjcyfq4xzkgc46kw85gishv7w9qmqrk"; depends=[dplyr ggfortify ggplot2 KEGGREST magrittr plyr reshape2 stringr tidyr]; }; oncomodel = derive2 { name="oncomodel"; version="1.0"; sha256="1jyyq9znffiv7rg26mjldbwc5yi2f4f8npsd2ykhxyacb3g96fp1"; depends=[ade4]; }; onehot = derive2 { name="onehot"; version="0.1.1"; sha256="1cdsz007wr054k5phvihhg4qx0fc039k2s6484m92kws8mb2ziix"; depends=[]; }; onemap = derive2 { name="onemap"; version="2.1.1"; sha256="0j9c0ynwpzyr548n72wzmmk8gi52qvxlxgzqzn8g6n4v5zmzlkhy"; depends=[fields ggplot2 maps Rcpp reshape2 tkrplot]; }; - onewaytests = derive2 { name="onewaytests"; version="1.7"; sha256="1lly2pxw08mmm4gqgj3wxa9ayhf90fyqjhnj8hcvr408k9p7bgsb"; depends=[car ggplot2 moments nortest]; }; + onewaytests = derive2 { name="onewaytests"; version="1.9"; sha256="15zs39krrf7i5g0bp830il3cihwbichsd6swhjxp53j77hwcb0hy"; depends=[car ggplot2 moments nortest]; }; onion = derive2 { name="onion"; version="1.2-7"; sha256="17jx7saxcsahyyivln4v9fzzcmidy6ygjd9n81skv5jpr491zkgk"; depends=[]; }; onlinePCA = derive2 { name="onlinePCA"; version="1.3.1"; sha256="08qivsfnwz5vp089lv9czsaz3nfi42kn9yhgzf27dji18y2xscic"; depends=[Rcpp RcppArmadillo RSpectra]; }; onlineVAR = derive2 { name="onlineVAR"; version="0.1-0"; sha256="1hqriwrlxhbi5v5wpqxfvvcb6np1iaarb3zf84ykfzi4llqqgz24"; depends=[lattice]; }; @@ -9229,19 +9626,19 @@ in with self; { oompaBase = derive2 { name="oompaBase"; version="3.2.6"; sha256="0lighs2546nyhpgbjsn4k53c7jw6xyla5b82v8jp3l1sqxj68a3s"; depends=[cluster]; }; oompaData = derive2 { name="oompaData"; version="3.1.1"; sha256="0by9qfxlx6fdmp12qnphlli5hdn5balvx4ckg64fw6vwa291g7b0"; depends=[]; }; openCR = derive2 { name="openCR"; version="1.2.0"; sha256="1wz31rnvdz1s253krf423ipkmfsxia66d5adnbyp3r59mc48yh1k"; depends=[abind MASS nlme plyr R2ucare Rcpp RcppParallel secr stringr]; }; - openEBGM = derive2 { name="openEBGM"; version="0.6.0"; sha256="0xzcdahfxdk1zjq6019yvr2mlhyqxbsqx6vd4w95mjq9h3bd5vmr"; depends=[data_table ggplot2]; }; + openEBGM = derive2 { name="openEBGM"; version="0.7.0"; sha256="1a4jcc15995id2fh22v18f1wrwlknfx3mlh6chjl0b93z60aad6k"; depends=[data_table ggplot2]; }; openNLP = derive2 { name="openNLP"; version="0.2-6"; sha256="1173cng877sg6ynbs3csfnn956wwrq3yldhhzfbqdsz35draganj"; depends=[NLP openNLPdata rJava]; }; openNLPdata = derive2 { name="openNLPdata"; version="1.5.3-4"; sha256="0j45rh9qki8r5wavaysrfsvb3wc3x8jjicqff2yi0r34j58xvlv8"; depends=[rJava]; }; openSTARS = derive2 { name="openSTARS"; version="1.1.0"; sha256="1cjws49r22cmdax136zcy3k35yzbajkm6pyfibgcw2iqdxy1vcxg"; depends=[data_table progress raster rgdal rgrass7 sf sp SSN]; }; - openVA = derive2 { name="openVA"; version="1.0.4"; sha256="1lfc8h64y7zlcyf30pw0zrmzrjh4x4kkij0awmwwzhw402cvb16r"; depends=[ggplot2 InSilicoVA InterVA4 InterVA5 nbc4va Tariff]; }; + openVA = derive2 { name="openVA"; version="1.0.7"; sha256="1hv0i2h9vw2l4gzsz31apc1w7k8rkrr5szxzfxhznchyv0sr9625"; depends=[cli crayon ggplot2 InSilicoVA InterVA4 InterVA5 purrr Tariff]; }; openadds = derive2 { name="openadds"; version="0.2.0"; sha256="1jb8zd3rpxfkjkg895iab6m4cfi53p5vy3nnpjkgq7ym6499qjcv"; depends=[crul dplyr jsonlite maptools rappdirs readr tibble xml2]; }; - openair = derive2 { name="openair"; version="2.4-2"; sha256="1kaq0ww3829qh6wsnaa2asyyqmqhdgm9am70g0vphf7lp9vjk9x1"; depends=[cluster dplyr hexbin lattice latticeExtra lubridate mapproj MASS mgcv purrr RColorBrewer Rcpp rlang tidyr]; }; + openair = derive2 { name="openair"; version="2.5-0"; sha256="1zsgqzp5rpyg4jr0vqk5jn1p0lba2lagsvw6idnwb1kjw82y82fd"; depends=[cluster dplyr hexbin lattice latticeExtra lubridate mapproj MASS mgcv purrr RColorBrewer Rcpp rlang tidyr]; }; opencage = derive2 { name="opencage"; version="0.1.4"; sha256="1lqs38lml73axsjlsjkmcsb2irgs40mjrx2cn3k0bjb63qyb9hf5"; depends=[dplyr httr jsonlite memoise]; }; - opencpu = derive2 { name="opencpu"; version="2.0.5"; sha256="1bs2z3y2zc3aqzfjh6bq3qrpzm106f5xhw7lbyng1bpcp4rch6y3"; depends=[brew curl devtools evaluate httpuv jsonlite knitr mime openssl protolite rappdirs sendmailR sys webutils zip]; }; + opencpu = derive2 { name="opencpu"; version="2.0.8"; sha256="1x5z1galq8m45fr2jnik4gx28gn2cdwaj2871c7cx5rang6rv1jp"; depends=[brew curl devtools evaluate httpuv jsonlite knitr mime openssl protolite rappdirs sendmailR sys webutils zip]; }; opendotaR = derive2 { name="opendotaR"; version="0.1.4"; sha256="17cygsw3nkg6zincfrcdh1509rlz3n5zrv9wvv7mjngm61sn79nf"; depends=[dplyr jsonlite lubridate]; }; openintro = derive2 { name="openintro"; version="1.7.1"; sha256="059azlasdkmp8f54qpjf3mq5dyqakw0dgx0kx85wfdmhq38zal5n"; depends=[]; }; - opensensmapr = derive2 { name="opensensmapr"; version="0.4.1"; sha256="1yq0fxlfb203di2y0n23zfy4xyjy1ij52s4kp1fn44pb3gmqhndm"; depends=[digest dplyr httr magrittr]; }; - openssl = derive2 { name="openssl"; version="1.0.1"; sha256="1qyql5gpwf88bkm1qarjhbqbq4hn6w0d8j4pxb5x7i96is30ap30"; depends=[]; }; + opensensmapr = derive2 { name="opensensmapr"; version="0.5.0"; sha256="0bv03p2fprgkqg2vm6ydqi5wjswkjlxwwmkk3r6lq2m4xq909d4r"; depends=[digest dplyr httr lazyeval magrittr purrr readr]; }; + openssl = derive2 { name="openssl"; version="1.0.2"; sha256="1djfpnphkcxx8idk5rjfzg8r8dnqsgc0shh2pw8lns5hap2wc5rc"; depends=[]; }; opentraj = derive2 { name="opentraj"; version="1.0"; sha256="13nqal96199l8vkgmkvl542ksnappkscb6rbdmdapxyi977qrgxk"; depends=[doParallel foreach maptools openair plyr raster reshape rgdal sp]; }; openxlsx = derive2 { name="openxlsx"; version="4.1.0"; sha256="1n7z22pm78xa77fvn77kdn68az6xzxk36y11sqf0w6h6adri4yxb"; depends=[Rcpp zip]; }; opera = derive2 { name="opera"; version="1.0"; sha256="0p2wg3srg088l420ykrq0wqvzh1mp6l753rdw35f7kdmaj08mqfq"; depends=[quadprog quantreg RColorBrewer]; }; @@ -9257,34 +9654,36 @@ in with self; { optbdmaeAT = derive2 { name="optbdmaeAT"; version="1.0.1"; sha256="1y1mvcyjihpj1wgjmifhmd10717wr1srp7h87azs4gfypgsiqchn"; depends=[igraph MASS Matrix]; }; optextras = derive2 { name="optextras"; version="2016-8.8"; sha256="03wqz16q8kn0ndk241h541fa0g5y0nrfg17vph85cm5xvzdd14cc"; depends=[numDeriv]; }; optiRum = derive2 { name="optiRum"; version="0.40.1"; sha256="1kl9mzh53pwhrxbn89dsjjpfji7k8vmysscd1qd9sw7vqdan8g6x"; depends=[AUC data_table ggplot2 knitr plyr scales stringr XML]; }; - optiSel = derive2 { name="optiSel"; version="2.0.1"; sha256="0bk2yf7wlkf2v76dybcqvqjy6n4cr72h0l05yfxba3zl8fw7r7na"; depends=[data_table doParallel ECOSolveR foreach kinship2 magic MASS Matrix nadiv optiSolve pedigree plyr pspline purrr quadprog Rcpp RcppArmadillo reshape2 stringr]; }; + optiSel = derive2 { name="optiSel"; version="2.0.2"; sha256="0k3651h7ih59w13jzkbh8m5pddi1g1zci5rn9dm3b873yjr2nalx"; depends=[data_table doParallel ECOSolveR foreach kinship2 magic MASS Matrix nadiv optiSolve pedigree plyr pspline purrr quadprog Rcpp RcppArmadillo reshape2 stringr]; }; optiSolve = derive2 { name="optiSolve"; version="0.1"; sha256="1wnpj7z0vqf91gzgz6r2ympnljq4mczxnnyk3sq7gvf6df4ic2m1"; depends=[alabama cccp MASS Matrix nloptr plyr Rcpp Rcsdp shapes stringr]; }; opticut = derive2 { name="opticut"; version="0.1-2"; sha256="1j479wa7mlp62c2y7shha1w7ybhfy8wvjfaz27kmwd1f61ma1g0l"; depends=[betareg MASS mefa4 pbapply pscl ResourceSelection]; }; optifunset = derive2 { name="optifunset"; version="1.0"; sha256="18pvdl04ln1i0w30ljdb3k86j27zg2nvrn3ws54c1g6zg9haqhbg"; depends=[]; }; optigrab = derive2 { name="optigrab"; version="0.7.3"; sha256="1vd4b6mh4a137nvsbpx71jibfd67va1m8iya1gasqiflm6qzszcx"; depends=[magrittr stringi]; }; optim_functions = derive2 { name="optim.functions"; version="0.1"; sha256="1la3v8yd9cdichp3mka4x86hr9lynh6qfg7h9ab6cwijw6kzkn6g"; depends=[lhs randtoolbox stringr]; }; - optimParallel = derive2 { name="optimParallel"; version="0.7-2"; sha256="1b705gn0f3m3cn1hy5ga6qazvl2kvgc9dmnqky2px1zbkw2n3qy0"; depends=[]; }; + optimParallel = derive2 { name="optimParallel"; version="0.7-4"; sha256="0415lz5qrhb423h55plws1hjf1fsddg2qf9phm1srvd24dvz2khw"; depends=[]; }; + optimStrat = derive2 { name="optimStrat"; version="1.1"; sha256="0wlkk0wmhzkxkam0d6lzr5s6hyb51fnvvd64syffgr084ivxymra"; depends=[shiny]; }; optimbase = derive2 { name="optimbase"; version="1.0-9"; sha256="0ivz24kf3yacgq5bl3s3az1pcyhsz0cza5f8vdksy5gchwqplm8n"; depends=[Matrix]; }; optimization = derive2 { name="optimization"; version="1.0-7"; sha256="09s62ax3w8zijfp2cmh2lvdqbl3nijbjkwq4n3icasi53lzg2179"; depends=[colorspace Rcpp]; }; optimr = derive2 { name="optimr"; version="2016-8.16"; sha256="02dgwkcjhf6ciwb6x6gyk7nn4v2jras7l1icfd4pjbypiapwnck9"; depends=[numDeriv optextras Rcgmin Rvmmin setRNG]; }; optimsimplex = derive2 { name="optimsimplex"; version="1.0-7"; sha256="1if32133556zwmijlz6085fg1h65442hy03lzia0ahap3yndqfqy"; depends=[optimbase]; }; optimus = derive2 { name="optimus"; version="0.2.0"; sha256="01njyjfrm6kjwx2qq41c0hsgxzydnrmr3538cpbfdn5i0z5blgyx"; depends=[mvabund ordinal]; }; - optimx = derive2 { name="optimx"; version="2013.8.7"; sha256="0pbd7s02isj24npi4m1m1f008xqwzvwp3kn472wz8nmy4zrid30s"; depends=[BB dfoptim minqa numDeriv Rcgmin Rvmmin setRNG svUnit ucminf]; }; + optimx = derive2 { name="optimx"; version="2018-7.10"; sha256="0npzgb5ky3p2iky4917grmysawh7mb5gwz4i7ssmh73ypqnndfhk"; depends=[numDeriv]; }; optional = derive2 { name="optional"; version="1.1"; sha256="13ajzybylw0q0x6yy6i8qr6l1ar53cyl708zgqaqaj0lkj183zhz"; depends=[magrittr]; }; optiscale = derive2 { name="optiscale"; version="1.1"; sha256="1c263w9df66m7lgvzpdfm2zwx9nj8wcdpgh5gijachr2dzffmrp2"; depends=[lattice]; }; optismixture = derive2 { name="optismixture"; version="0.1"; sha256="0nacfbqlnzajp1hfhf0yzm2d86fxpp4kw2zy33q8k2d4sr56bird"; depends=[Matrix mvtnorm]; }; - optmatch = derive2 { name="optmatch"; version="0.9-9"; sha256="04w6ma1f09rjlz2qalfqk894pdkvqszr13n010y7015b3dsyqnkk"; depends=[digest Rcpp RItools survival]; }; + optmatch = derive2 { name="optmatch"; version="0.9-10"; sha256="1jnvk9r7jc8w5rg8xvhbhj0wmy0l1hhjm8iwyf703939p4xc5z71"; depends=[digest Rcpp RItools survival]; }; optparse = derive2 { name="optparse"; version="1.6.0"; sha256="1d7v5gl45x4amsfmzn5zyyffyqlc7a82h01szlnda22viyxids0h"; depends=[getopt]; }; optpart = derive2 { name="optpart"; version="2.3-0"; sha256="125b9sfdk4bdcj1vq5rxlrskv1zra31x8d96pdxnqvcnkmwxm4zh"; depends=[cluster labdsv MASS plotrix]; }; optrcdmaeAT = derive2 { name="optrcdmaeAT"; version="1.0.0"; sha256="16g4612mwyfsckn6l71fbrjnnjv4yvnac1cccbrn3k8jh07qgb1h"; depends=[igraph MASS Matrix]; }; - optrdd = derive2 { name="optrdd"; version="1.0.1"; sha256="1nvrl04vg5ayrqqf6n3sb8jp37xifl5inh9nyr7pv6szckih6cd2"; depends=[CVXR Matrix quadprog]; }; + optrdd = derive2 { name="optrdd"; version="1.0.2"; sha256="04c0dz68bs9h7l7bw9l0fahbbr2d0472xcq23pj91c8953n2mkak"; depends=[CVXR glmnet Matrix quadprog]; }; optrees = derive2 { name="optrees"; version="1.0"; sha256="1zqpjii8dsfs98n58qpif81ckvyxkr0661svhlbgzi19xb2vszqs"; depends=[igraph]; }; + optweight = derive2 { name="optweight"; version="0.2.0"; sha256="0qpm5i9anzmv03cgdpk3r7pr6gg9l32hrnbrrd65cmkvf5wdxcyj"; depends=[ggplot2 Matrix rosqp]; }; opusminer = derive2 { name="opusminer"; version="0.1-0"; sha256="1m4gsjylz58pbmhgcy4l9hqdsgy8ra1zg0d3rb6h2qiwfyfm0yh4"; depends=[arules Matrix Rcpp]; }; orQA = derive2 { name="orQA"; version="0.2.1"; sha256="0vivjrpcbql42y078gi91kfpfdpv73j23jkiv8fpazzwzdi8ydqq"; depends=[genefilter gtools nlme Rcpp]; }; ora = derive2 { name="ora"; version="2.0-1"; sha256="0albxqma220rnrpfdq3z9cawr83q1a0zzczbbcy4nijjm4mswphy"; depends=[DBI ROracle]; }; orca = derive2 { name="orca"; version="1.1-1"; sha256="1wd5nh2vh6j1rp78hbw17qipi67f0wimrbkiarak8f7k5pfiy1zn"; depends=[]; }; orclus = derive2 { name="orclus"; version="0.2-6"; sha256="0d78mn2vl2yxlvdswyxkxp9zg59b8cvfksz9m56kddn79aps1ikl"; depends=[]; }; - orcutt = derive2 { name="orcutt"; version="2.2"; sha256="0mwfbbsn39nla083p845xbbgh3y8kkrg0q735kap64jf4pgcyac7"; depends=[lmtest]; }; + orcutt = derive2 { name="orcutt"; version="2.3"; sha256="0pj7pqzbcg4gp35nsz3avyawmx69dgj0l2w0x8ypw5qwl4zhmnyk"; depends=[lmtest]; }; ordBTL = derive2 { name="ordBTL"; version="0.8"; sha256="09x3zfmss4fsh3rjghgmpv8y34dnkz4mw696b3k3nvlgk55a1423"; depends=[caret gtools VGAM wikibooks]; }; ordDisp = derive2 { name="ordDisp"; version="1.0.1"; sha256="1vjki73h8933z36ikwmjn84ldz154mahp2jkd9cbj5n6xsi47fnw"; depends=[VGAM]; }; ordPens = derive2 { name="ordPens"; version="0.3-1"; sha256="0yzf3qzi4p7xqimihjvr0wkdvj3sy9n3wc86bf4bjbavniq6m69r"; depends=[grplasso mgcv RLRsim]; }; @@ -9294,22 +9693,22 @@ in with self; { orderedLasso = derive2 { name="orderedLasso"; version="1.7"; sha256="0vrh89nrmpi8xscvambcb1y70gqqi5819a2gxh02h4pnyjn8axql"; depends=[ggplot2 Iso Matrix quadprog reshape2]; }; orderstats = derive2 { name="orderstats"; version="0.1.0"; sha256="0a3ga0cjryvbininspsx5wzc96s3fza06s3d5fhbllbixz0rap4a"; depends=[]; }; ordiBreadth = derive2 { name="ordiBreadth"; version="1.0"; sha256="04faqhas1p9lxhghd4xq07yq1nxv7ns18avhvkql7sy5a9g7bfs1"; depends=[vegan]; }; - ordinal = derive2 { name="ordinal"; version="2018.4-19"; sha256="04fpm4jsjfd90ig2rzd11jafkip74814b60ixis0sii2gr9c8zxb"; depends=[MASS Matrix ucminf]; }; - ordinalClust = derive2 { name="ordinalClust"; version="1.2.1"; sha256="1035471ni5f8129w23kkj7263p5pa9jlihqdq2skda410lj50vnk"; depends=[progress Rcpp RcppArmadillo]; }; + ordinal = derive2 { name="ordinal"; version="2018.8-25"; sha256="03cv9hcrw8j3lhamzhz8sk2p3ns4cw9z41x49h301k2b3pajv43h"; depends=[MASS Matrix numDeriv ucminf]; }; + ordinalClust = derive2 { name="ordinalClust"; version="1.3.1"; sha256="10wk2brp8a3k1pjsl7wify4ki59ad4vbpqgmbi5va99hfnywz5ml"; depends=[Rcpp RcppArmadillo RcppProgress]; }; ordinalCont = derive2 { name="ordinalCont"; version="1.3.0"; sha256="0zi9cfvkb811hhcplp159zpnmmk4rs0nid19gi4g9g3dgn9pa296"; depends=[boot]; }; - ordinalForest = derive2 { name="ordinalForest"; version="2.1"; sha256="1ancr7xdwhbqq3rj5hijrkjbrcaih8rqcx5r41mykrrp1k1s55dd"; depends=[combinat ggplot2 Rcpp]; }; - ordinalNet = derive2 { name="ordinalNet"; version="2.4"; sha256="0c9k3p62d482sl0vg94xm6hllk2mic2nd1c5m4vhci5ycavqzdd3"; depends=[]; }; + ordinalForest = derive2 { name="ordinalForest"; version="2.2"; sha256="1cfcdk7nndw7z1shq966pdk6448hdvfqc6c1z4fwrrlkp75gnjr5"; depends=[combinat ggplot2 nnet Rcpp]; }; + ordinalNet = derive2 { name="ordinalNet"; version="2.5"; sha256="1lx8jacidb6irwb2mwsc75dy90fnvrpgwcg8s2wzkvql1lasc6wy"; depends=[]; }; ordinalRR = derive2 { name="ordinalRR"; version="1.0"; sha256="07gihg8hppxa7bp5wxcshqawj3vkzicmdsrnjyrasr3glv08b9lj"; depends=[rjags]; }; - ordinalgmifs = derive2 { name="ordinalgmifs"; version="1.0.4"; sha256="1s8f8fpiyyxxqlcwa5pn2aj1iggf5r1q7zkvzsik6265krcsbqn6"; depends=[survival]; }; - ore = derive2 { name="ore"; version="1.6.1"; sha256="0hy1xm03zbmd336g9jjrkdsx1z7ai32jvj1hk8a7bj9wqb5rl8g5"; depends=[]; }; + ordinalgmifs = derive2 { name="ordinalgmifs"; version="1.0.5"; sha256="0i66i0qwsc52yj4hpfzk4d8v2nwdd4zr7zgqlxvsk3n8vi65lnqf"; depends=[survival]; }; + ore = derive2 { name="ore"; version="1.6.2"; sha256="1l1ziljgm5gwjhvjq42wi5vcwbxlaj5dl9w8bhz0wh8vx4ajj07m"; depends=[]; }; ores = derive2 { name="ores"; version="0.3.1"; sha256="12war455cfcn2llig7pkx05b70dp5y7warjq03ayqq6i7c945mhb"; depends=[httr]; }; orgR = derive2 { name="orgR"; version="0.9.0"; sha256="1q4qbwnbhmja8rqiph7g7m4wxhzhk9mh91x1jgbnky8bs4ljdgrx"; depends=[data_table ggplot2 ggthemes lubridate stringr]; }; orgutils = derive2 { name="orgutils"; version="0.4-1"; sha256="1yc3avhq3786his7nd60zfbzd9inkfrfz938r8378z59zbb1mzqq"; depends=[textutils]; }; orientlib = derive2 { name="orientlib"; version="0.10.3"; sha256="1qi46hkz73b8722zc3w6wvsq1ydlk37yxn9rd1dqygqbs1svkmvv"; depends=[]; }; origami = derive2 { name="origami"; version="1.0.0"; sha256="0692n4javr0lwxcd0b83sbbhxbmxxs41sjvlsq5bc5l7n140qaca"; depends=[abind data_table future future_apply listenv]; }; originr = derive2 { name="originr"; version="0.3.0"; sha256="1r4w8gilr25gdqm3slviwas3s7qkpiyv4ifzp7qkby6vrdswnngb"; depends=[crul data_table jsonlite taxize xml2]; }; - orloca = derive2 { name="orloca"; version="4.5"; sha256="1zkd80b8rqy3x389c5pwsh0k8q6hy9bg4vvqs2xigxbprz4gyzl7"; depends=[png ucminf]; }; - orloca_es = derive2 { name="orloca.es"; version="4.5"; sha256="0lnv565c7g69649481w3rlnx0yya7bw9fkpwim9bs639flwh6w96"; depends=[orloca]; }; + orloca = derive2 { name="orloca"; version="4.6"; sha256="1mhm4m0qmhhb1kca2s5z630f52h3a5ms16aqxrq9a8j9nyd65xh4"; depends=[knitr png ucminf]; }; + orloca_es = derive2 { name="orloca.es"; version="4.6"; sha256="1yfsvihm8p4ggdfam50i2xg7dy7khww5qqk6g4lry3m1icwx6vsy"; depends=[orloca]; }; oro_dicom = derive2 { name="oro.dicom"; version="0.5.0"; sha256="05dmhfglp76apyilwicf3n2ylyjhp1gq6b9bnzsiiblpjnfpia43"; depends=[oro_nifti]; }; oro_nifti = derive2 { name="oro.nifti"; version="0.9.1"; sha256="19w9dzyfmfgxgxb5i0l06b6gzqksx879iwicfs76fwmb1q2ph540"; depends=[abind bitops RNifti]; }; oro_pet = derive2 { name="oro.pet"; version="0.2.6"; sha256="1dczii7knh9241ksswxk9zg1d69mhk2ilrk4kjv7cj9nfm8fgmja"; depends=[minpack_lm msm oro_dicom oro_nifti]; }; @@ -9323,10 +9722,10 @@ in with self; { osd = derive2 { name="osd"; version="0.1"; sha256="1py9p15nrcydr8w9ilxkxabiz9zlqnls8xn9avjkxd8x6602jx6p"; depends=[JADE nnls]; }; oshka = derive2 { name="oshka"; version="0.1.2"; sha256="02hglpq5lknq93zbcf219lhnhppzgygkhxqixb15f89rxf9fczgs"; depends=[]; }; osmar = derive2 { name="osmar"; version="1.1-7"; sha256="0q6d8nw7d580bnx66mjc282dx45zw9srczz90b520hjcli4w3i3r"; depends=[geosphere RCurl XML]; }; - osmdata = derive2 { name="osmdata"; version="0.0.7"; sha256="0gpb8anvm9wmhvdkirhclkyppqz1sd5siclszigff11fw4bxnwj3"; depends=[curl httr jsonlite lubridate magrittr Rcpp rvest sp xml2]; }; + osmdata = derive2 { name="osmdata"; version="0.0.8"; sha256="0hhfnraxjj54z5p3lnpvklhpmdhihs9lgfb9dm3s9h7kjcknf6x3"; depends=[curl httr jsonlite lubridate magrittr Rcpp rvest sp xml2]; }; osmose = derive2 { name="osmose"; version="0.1.1"; sha256="0fiijnrvvydhj6j9yb02rn5sg8arcpj3jz977m2zwjgqy878cffg"; depends=[rlist stringr]; }; osmplotr = derive2 { name="osmplotr"; version="0.3.0"; sha256="0w45riwwjigh1bxf9gx0wdj2yhdizwi6ydprp83pss2z9wph66yb"; depends=[curl e1071 ggm ggplot2 httr osmdata rgeos sp spatstat]; }; - osqp = derive2 { name="osqp"; version="0.3.1"; sha256="1q7f009xbl15prsn6l18fr307a7z76rw39z6fj380nliq6s5s56z"; depends=[Matrix R6 Rcpp]; }; + osqp = derive2 { name="osqp"; version="0.4.1"; sha256="0v1sg914l1xz2f2crgwy2pp9k72ak2k1qmqix20j2akqmlvr39p2"; depends=[Matrix R6 Rcpp]; }; osrm = derive2 { name="osrm"; version="3.1.1"; sha256="14rf5m2pm5w414v2l1dvd6vlvirms93l8rkfbmgcvxwxmc52b187"; depends=[gepaf jsonlite raster RCurl rgeos sp]; }; osrmr = derive2 { name="osrmr"; version="0.1.29"; sha256="1mkc39v56m7b89nbjzs50kzz8w1i1950gciiw7iyqpdj6g2knwdx"; depends=[assertthat bitops R_utils rjson stringr]; }; otinference = derive2 { name="otinference"; version="0.1.0"; sha256="1l75jjnkyk8yzaw9zyk45jq9ys304i6pzm2xd5apxrb1jk75a3li"; depends=[MASS Rglpk sm transport]; }; @@ -9337,12 +9736,14 @@ in with self; { outbreaker = derive2 { name="outbreaker"; version="1.1-8"; sha256="0przz78jzkwl580w83p0aigaykfki2hdzprwqic7dy6yxnpqlpm3"; depends=[adegenet ape igraph]; }; outbreaker2 = derive2 { name="outbreaker2"; version="1.0.1"; sha256="1v49i9z4kx9l485ib5q91s4z6r03lyijzjrr9zyjgham59rncyij"; depends=[ape ggplot2 magrittr Rcpp visNetwork]; }; outbreaks = derive2 { name="outbreaks"; version="1.3.0"; sha256="1k0g9x6wvdw8lkpjiv8z1ijp6pg5hri3gawx7zfpnm05g6ncvg81"; depends=[]; }; + outcomerate = derive2 { name="outcomerate"; version="1.0.1"; sha256="07mwml7r98qjgvrp938sqf7klyspz110583j0zwb72j69n4whmrj"; depends=[Rdpack]; }; outliers = derive2 { name="outliers"; version="0.14"; sha256="0vcqfqmmv4yblyp3s6bd25r49pxb7hjzipiic5a82924nqfqzkmn"; depends=[]; }; outreg = derive2 { name="outreg"; version="0.2.2"; sha256="04f1x7mxq4swbd7bfwjjgx4838jm6qj4piaighmhcscwrdkxa1cp"; depends=[magrittr reshape2 sandwich stringr tidyr]; }; overlap = derive2 { name="overlap"; version="0.3.2"; sha256="1j3m6ir1chdz0si2fhcw6gs7c9h09bv0chz18rpzxsywww6d4rzy"; depends=[]; }; overlapping = derive2 { name="overlapping"; version="1.5.0"; sha256="1xqpkyxpdzcvq7s2hzkbnfddffjfs1xrxhrkvl5i4qv1czdsphjn"; depends=[ggplot2]; }; overlapptest = derive2 { name="overlapptest"; version="1.0"; sha256="1p5xbqbl1kpvx7rjb335k7hfc8i9b13p2r2rr6rrjfa8zs74smml"; depends=[spatstat]; }; owmr = derive2 { name="owmr"; version="0.7.2"; sha256="0206i5zzmfjdd43qziis6kqc0zsvn0l7v5sspjrywjxw2gyjfmwb"; depends=[httr jsonlite magrittr]; }; + ows4R = derive2 { name="ows4R"; version="0.1-0"; sha256="1a27h63spy46ms7fgh2vl659znp5g55d1hsk6py6lgfa6hc2f1dx"; depends=[geometa httr openssl R6 rgdal sf XML]; }; oxcAAR = derive2 { name="oxcAAR"; version="1.0.0"; sha256="19inf2bcpfj4jzfym1v5f1w5fkmcycz5jrfc2hf0wsvixy53lfxa"; depends=[jsonlite stringr]; }; oz = derive2 { name="oz"; version="1.0-21"; sha256="0p4r8qbpv7q6vad940540pd3lk79pyfj41h2cn22hsy1j0va1qbv"; depends=[]; }; p2distance = derive2 { name="p2distance"; version="1.0.1"; sha256="1ims8i5z5k97kjpdysgx8g7lgvnvf7amahcrssw7bk38bvbxawni"; depends=[]; }; @@ -9352,10 +9753,11 @@ in with self; { pCalibrate = derive2 { name="pCalibrate"; version="0.1-1"; sha256="04a7dmf9sjw44y53i469f8fjm8as2vwr0pgk4s91l63pxdqnjvfl"; depends=[epitools exact2x2 MCMCpack]; }; pGLS = derive2 { name="pGLS"; version="0.0-1"; sha256="1rlk8q09sikf4vpzsx0c7s6qqh2hxf8dy2bgcm4nnkbv2nfjz438"; depends=[MASS]; }; pGMGM = derive2 { name="pGMGM"; version="1.0"; sha256="1hkczz38g8a8253jm8vhm8948fs91g6b2rfzkz47srkkby9ksa4x"; depends=[JGL MASS mvtnorm]; }; + pGPx = derive2 { name="pGPx"; version="0.1.1"; sha256="0b3pjrk7496nlw1cv5m6yfp02c663452z67y21yhhm26b17nrldv"; depends=[DiceKriging KrigInv pbivnorm pracma randtoolbox Rcpp RcppArmadillo rgenoud]; }; pKSEA = derive2 { name="pKSEA"; version="0.0.1"; sha256="1k9javxbhx28hf5k3i66ggqwlws2w9qwp01g8f7jmyp92pxr3qqd"; depends=[]; }; pMineR = derive2 { name="pMineR"; version="0.31"; sha256="1j71dcldzmk4kzspx4v5s3vqqkllgwkckfm1g145qgg26c1gyc6l"; depends=[cluster DiagrammeR stringr XML]; }; pRF = derive2 { name="pRF"; version="1.2"; sha256="17srabk7mam16rdzc5g9ggdrhjjk8wibny40gxvgzkv7qgq7m80x"; depends=[dplyr ggplot2 multtest permute randomForest reshape2]; }; - pROC = derive2 { name="pROC"; version="1.12.1"; sha256="05ad69a6fxy9k903cw3h4q59ch2jv6qfg9yjdbw3cgiiazcafrlj"; depends=[ggplot2 plyr Rcpp]; }; + pROC = derive2 { name="pROC"; version="1.13.0"; sha256="0ain17clympkx09ym7gydylcd93096dxzqx1qzci310yq2l7fknm"; depends=[ggplot2 plyr Rcpp]; }; pRSR = derive2 { name="pRSR"; version="3.1.1"; sha256="1irx95b7cwvx3gpn9brjjn4k947m8frz542r18nilc9f1159mb3s"; depends=[]; }; pSI = derive2 { name="pSI"; version="1.1"; sha256="0cvw38dqqlyx7cpl27hq33f5xns2d0019lyr98pwndcnbp09mx0b"; depends=[gdata]; }; pa = derive2 { name="pa"; version="1.2-1"; sha256="1pfgzxirkb0p8f6smjlrbp1qpsh0vsvqf306cvldaj9zx8cw0q9f"; depends=[ggplot2]; }; @@ -9367,9 +9769,9 @@ in with self; { packagedocs = derive2 { name="packagedocs"; version="0.4.0"; sha256="0zw9ana7s42ardphhdaklba02yjj1v8gliq4l98397mjmzc6f4xd"; depends=[crayon devtools digest evaluate highlight htmltools lazyrmd magrittr rmarkdown stringr whisker yaml]; }; packagefinder = derive2 { name="packagefinder"; version="0.0.7"; sha256="030s8r2k0q3vls6vndmdz8a45kqrqx9whqvrcbh3f6xgy1vhs1hs"; depends=[formattable httr jsonlite pander stringr]; }; packagetrackr = derive2 { name="packagetrackr"; version="0.1.1"; sha256="0xjq27j7bd7lps0vp9gdinxn19wl10k2cp9wb2xjih7p6l0wd57g"; depends=[dplyr httr magrittr rappdirs]; }; - packcircles = derive2 { name="packcircles"; version="0.3.2"; sha256="1hqzvhk8zm95vsrvf6bifxkgdgik8hixylslfvzpfcq378zi97yb"; depends=[Rcpp]; }; + packcircles = derive2 { name="packcircles"; version="0.3.3"; sha256="0gik0splf48zfl40297nh7lbgvd2qqlci99wv841mfy7858ai933"; depends=[Rcpp]; }; packrat = derive2 { name="packrat"; version="0.4.9-3"; sha256="0d42x4qvz9hs7s5sl2lhklsdc8imrnp2k800xdagrpjilww9jac7"; depends=[]; }; - pacman = derive2 { name="pacman"; version="0.4.6"; sha256="1vdak1hv3j44dsj6cckzc1a86dg933jqhxdys8fyxacmk101l388"; depends=[devtools]; }; + pacman = derive2 { name="pacman"; version="0.5.0"; sha256="0gb0fsm8rm81j22q93fqx8q6zgjq3w1pv791ac0smc1a45blfab1"; depends=[remotes]; }; paco = derive2 { name="paco"; version="0.3.2"; sha256="0qf692fqlq0d7hh9yllywaswmj5spy6q1r67nzkhgyh311nhjh6c"; depends=[plyr vegan]; }; pacotest = derive2 { name="pacotest"; version="0.3"; sha256="135637bidfx71xay6c69lfjvr4i0v3ckgkg0fi838p24is6icbix"; depends=[ggplot2 gridExtra numDeriv Rcpp RcppArmadillo VineCopula]; }; pact = derive2 { name="pact"; version="0.5.0"; sha256="043hbydj5f6889xrfsrn8jrgid2nnbsz6d7jpn4hywwa97snw4ny"; depends=[glmnet survival]; }; @@ -9378,6 +9780,7 @@ in with self; { pafdR = derive2 { name="pafdR"; version="1.0"; sha256="1yimsd4h23hcf752p5flda3dqk8hgn6qm9k0pmbapxj4jbsw14w5"; depends=[curl exams stringr]; }; pagenum = derive2 { name="pagenum"; version="1.1"; sha256="0908rlr9sd1a2qwz0idw8ccxhji73sk24gyrdl071lpnd1rs2wl7"; depends=[]; }; pageviews = derive2 { name="pageviews"; version="0.3.0"; sha256="031y67nqqvf3fa2273m7z2cldda0ijh63qwkh4gis3hz9hfril0v"; depends=[curl httr jsonlite]; }; + painter = derive2 { name="painter"; version="0.1.0"; sha256="0qr6p13h50rlavcsamxmijfr4dfrbv1k088m28qf8a4gam3ap85b"; depends=[]; }; paintmap = derive2 { name="paintmap"; version="1.0"; sha256="1qw5725yjymxmfhffqjx4lbmzj437c7qwr8xrzmf52f0m28nl3vk"; depends=[]; }; pairedCI = derive2 { name="pairedCI"; version="0.5-4"; sha256="03wf526n3bbr2ai44zwrdhbfx99pxq1nbng9wsbndrdg2ji4dar2"; depends=[]; }; pairheatmap = derive2 { name="pairheatmap"; version="1.0.1"; sha256="1awmqr5n9gbqxadkblpxwcjl9hm73019bwwfwy1f006jpn050d6l"; depends=[]; }; @@ -9385,13 +9788,14 @@ in with self; { pairwise = derive2 { name="pairwise"; version="0.4.3-2"; sha256="1kb73jsfyp1daqbrmpwh8l9j28fgiapimfwdypz82m46wza1qgww"; depends=[]; }; pairwiseCI = derive2 { name="pairwiseCI"; version="0.1-26"; sha256="0dislkyvzckkxl2ccdpalyfbp4pfs6yvzwr175h2xcbzm5jjf35j"; depends=[boot coin MASS MCPAN mcprofile]; }; palaeoSig = derive2 { name="palaeoSig"; version="1.1-3"; sha256="1zm8xr7fpnnh6l4421vjavi6bg44iars3mna4r5fw3spmbswyv7b"; depends=[MASS mgcv rioja TeachingDemos vegan]; }; - palasso = derive2 { name="palasso"; version="0.0.1"; sha256="00vwp0xbnp8fj8g7qn81r4j15vwp26pjjh51hc8syi8l7457alhm"; depends=[glmnet Matrix survival]; }; + palasso = derive2 { name="palasso"; version="0.0.2"; sha256="19syj2qlmnrbz75hhlrslh04k8cmi3bh8r15yq8gwy1mr9kwq3i3"; depends=[CorShrink glmnet Matrix survival]; }; paleoMAS = derive2 { name="paleoMAS"; version="2.0-1"; sha256="1hhb5wbj4m3ch8wnvd1zkl5bk6wa9nl6jl1dhm4z6yqkh29yn9z6"; depends=[lattice MASS vegan]; }; paleoTS = derive2 { name="paleoTS"; version="0.5-1"; sha256="18f5lkgzvndc8s7w7d7dfdlqf37adrmzabpwkavjw1zkpb1dga8c"; depends=[doParallel foreach iterators mnormt]; }; paleobioDB = derive2 { name="paleobioDB"; version="0.5.0"; sha256="195w0jzg8bhlqbsd3shi161wqr9cff6q85ik0x8w4laazzxs0jhr"; depends=[gtools maps plyr raster RCurl rjson scales]; }; paleofire = derive2 { name="paleofire"; version="1.2.2"; sha256="0mg03k3yf68js580ljvwcn7xfl0m1s408hb34a9h3mh3a5knm2zc"; depends=[GCD ggplot2 lattice locfit plyr raster rgdal]; }; paleomorph = derive2 { name="paleomorph"; version="0.1.4"; sha256="05l55miahkmj8ikq8qz20y6kgxvxmdf04kji898i7fp8qyj4vfpa"; depends=[]; }; - paleotree = derive2 { name="paleotree"; version="3.1.0"; sha256="1f90f6m6qgywxa134dv8rd43660vkr9n2s82wn0iwq7w89gqlcj2"; depends=[ape phangorn phytools]; }; + paleotree = derive2 { name="paleotree"; version="3.1.3"; sha256="05669s0lmd9azzpgn5iqayp49lg6sn34z4bqizcbpjviw6jwh72c"; depends=[ape phangorn phytools]; }; + paletteer = derive2 { name="paletteer"; version="0.1.0"; sha256="02d0k74bxdjphw34v4vvnc2dd04cvm9y6m0x8ngfhqmgv4nfsjx9"; depends=[ggthemes jcolors oompaBase palr pals rlang scico viridisLite]; }; palettetown = derive2 { name="palettetown"; version="0.1.1"; sha256="1kjj1sqib1ns7895plp8c7h317pxwbyxi2shjkcgadkcsv2yjsxn"; depends=[]; }; palinsol = derive2 { name="palinsol"; version="0.93"; sha256="0k29sl2j7yf4yc0dhb047rxwg9np9l6pdwv6wyb4j80yc07vc9am"; depends=[gsl]; }; palm = derive2 { name="palm"; version="1.1.1"; sha256="1fbc5ri5k152ww3cajjjclcas22mfvypfn3hdpkkmf307lvjaja3"; depends=[gsl minqa mvtnorm R6 Rcpp spatstat]; }; @@ -9403,18 +9807,18 @@ in with self; { pampe = derive2 { name="pampe"; version="1.1.2"; sha256="092n04nrp886kd163v32f5vhp9r7gnayxzqb6pj57ilm5w1yrcsk"; depends=[leaps]; }; pamr = derive2 { name="pamr"; version="1.55"; sha256="1hy3khb0gikdr3vpjz0s245m5zang1vq8k93g7n9fq3sjfa034gd"; depends=[cluster survival]; }; pan = derive2 { name="pan"; version="1.6"; sha256="1dk3jjj826p7xrz10qz04vyc068xnypg7bp0pj4c32z3da0xzh5d"; depends=[]; }; - pander = derive2 { name="pander"; version="0.6.1"; sha256="1axknd1isfjg4wj5b1smvl7qr4wvjdw1kikrghjnp73xh0glr7pp"; depends=[digest Rcpp]; }; + pander = derive2 { name="pander"; version="0.6.2"; sha256="0gd7rqkpbraznip8jmri9lqa8ajg1sryyplhd6m633wg91whiipi"; depends=[digest Rcpp]; }; pandocfilters = derive2 { name="pandocfilters"; version="0.1-1"; sha256="18n155rkbr3gq5lsb0bh1v1v0z0r6xr2ald3nh7xh3v9qwxpmsz1"; depends=[jsonlite]; }; panelAR = derive2 { name="panelAR"; version="0.1"; sha256="1ka2rbl9gs65xh2y2m4aqwh5qj4szibjy101hqfmza9wmdh25gpq"; depends=[car]; }; - panelView = derive2 { name="panelView"; version="1.0.1"; sha256="1ianff9clc0318nk0xplnslfqi5sxn773qcvxv3axj247994xpay"; depends=[ggplot2 gridExtra]; }; + panelView = derive2 { name="panelView"; version="1.0.5"; sha256="1hmb311qimm60l9zvk0nkgh4qy2givm8a8rdmmpfb9bfbbg6clks"; depends=[ggplot2 gridExtra]; }; panelaggregation = derive2 { name="panelaggregation"; version="0.1.1"; sha256="0x8ldqb9216pclfvs4ymdpian43v2ydkyflpf0k6lcn35r04xfr6"; depends=[data_table]; }; panelvar = derive2 { name="panelvar"; version="0.5.1"; sha256="1394lvvpzbcvm2mhxw68k784jyvsnzxiq787kdf4y4538lqgfx1n"; depends=[ggplot2 knitr MASS Matrix matrixcalc progress reshape2 texreg]; }; pangaear = derive2 { name="pangaear"; version="0.6.0"; sha256="0dykacf5ckhck08rbk6l5kyw51i2p1ncy44agcxj79cr290cd5ck"; depends=[crul jsonlite oai png rappdirs tibble xml2]; }; papayar = derive2 { name="papayar"; version="1.0"; sha256="11vkjhazfwfixsr6dba5jrcsr3r3mqgvj5s070b4gp70d6k1z8s5"; depends=[htmltools neurobase oro_nifti servr]; }; - papeR = derive2 { name="papeR"; version="1.0-2"; sha256="1pp6zzdqg9lj61f8p90sxl30vp9knmis7154fmfpm6pynbgr46ms"; depends=[car gmodels xtable]; }; + papeR = derive2 { name="papeR"; version="1.0-3"; sha256="0c3zziy32wnpvnv7d3kh1gs24pmy9ap2hq0l3ss2h79s5vmc76xi"; depends=[car gmodels xtable]; }; paperplanes = derive2 { name="paperplanes"; version="0.0.1.9"; sha256="1d9grc95xqxn91lvk8v7w3z90bhl8savkhihwshyjp8ij2xpzfkl"; depends=[]; }; parSim = derive2 { name="parSim"; version="0.1"; sha256="15d3k91mvbv2hmq0l1jfr0hsv2zkz3cr6axg85kf9bd9q79b85qp"; depends=[dplyr]; }; - parallelDist = derive2 { name="parallelDist"; version="0.2.1"; sha256="1w6c5ijnynqq7q15f5mflmxcad6yblpdaflh378lf9vm2xdq0yjp"; depends=[Rcpp RcppArmadillo RcppParallel]; }; + parallelDist = derive2 { name="parallelDist"; version="0.2.2"; sha256="0h7bf2mlfpydqr3msirg07wn041fqlcdha9m8rybix1x3vi778qc"; depends=[Rcpp RcppArmadillo RcppParallel]; }; parallelMCMCcombine = derive2 { name="parallelMCMCcombine"; version="1.0"; sha256="05krkd643awqhfrylq9lxr2cmgvnm1msn2x8p1l1483n2gzyklz7"; depends=[mvtnorm]; }; parallelML = derive2 { name="parallelML"; version="1.2"; sha256="05j0rb81i8342m8drwgmgi1w30q96yf501d83cdq4zhjbchphbl1"; depends=[doParallel foreach]; }; parallelMap = derive2 { name="parallelMap"; version="1.3"; sha256="026d018fr2a43cbh8bi2dklzr9fxjzdw5qyq84g2i18v5ibr6bd5"; depends=[BBmisc checkmate]; }; @@ -9424,7 +9828,7 @@ in with self; { paramlink = derive2 { name="paramlink"; version="1.1-2"; sha256="0y6wsrxwyavipmrjjznr2n920w0p6qlwapxc9mnkh9c6w3yznka2"; depends=[assertthat kinship2 maxLik]; }; params = derive2 { name="params"; version="0.6.1"; sha256="0w7k8k7z8p1y2w0dhpfssa868xaikfzfdjw2vlj1yl299k5yisax"; depends=[whisker]; }; paramtest = derive2 { name="paramtest"; version="0.1.0"; sha256="0yn1s1qkgby8x0qn7cy1zhxzc0wyi7bm30pkvijhn5h5afjpylsy"; depends=[boot]; }; - paran = derive2 { name="paran"; version="1.5.1"; sha256="0nvgk01z2vypk5bawkd6pp0pnbgb54ljy0p8sc47c8ibk242ljqk"; depends=[MASS]; }; + paran = derive2 { name="paran"; version="1.5.2"; sha256="0d9la83mxfpfgdfrqa40ck5fcp3j2b70d8c8nl9wmdsgvgqrl23s"; depends=[MASS]; }; parboost = derive2 { name="parboost"; version="0.1.4"; sha256="087b4as0w8bckwqpisq9mllvm523vlxmld3irrms13la23z6rjvf"; depends=[caret doParallel glmnet iterators mboost party plyr]; }; parcor = derive2 { name="parcor"; version="0.2-6"; sha256="10bhw50g8c4ln5gapa7wghhb050a3jmd1sw1d1k8yljibwcbbx36"; depends=[Epi GeneNet glmnet MASS ppls]; }; parfm = derive2 { name="parfm"; version="2.7.5"; sha256="1wnklksqybhaqwsfifwv8gmqjl6g9dm9s4z131mbjn4dm7bj1bra"; depends=[msm optimx sn survival]; }; @@ -9432,21 +9836,22 @@ in with self; { parlitools = derive2 { name="parlitools"; version="0.2.1"; sha256="14nzcbjddwnsiwwksl7bf2qk1kzzcnjc0b47ilqiq4nc4c386im3"; depends=[dplyr hansard httr jsonlite mnis sf stringi tibble]; }; parma = derive2 { name="parma"; version="1.5-3"; sha256="0yjpmxz20v6k107qylw42yf1b231hzym9dizjcq1kalivvscczc5"; depends=[corpcor nloptr quadprog Rglpk slam truncnorm]; }; parmigene = derive2 { name="parmigene"; version="1.0.2"; sha256="1fsm6pkr17jcbzkj1hbn91jf890fviqk1lq6ls8pihsdgah1zb4d"; depends=[]; }; + parmsurvfit = derive2 { name="parmsurvfit"; version="0.0.1"; sha256="0sgs2gk2592ly2jkvfnhjcwfxhhwk7758hfnxi6id83aca6l52wm"; depends=[fitdistrplus flexsurv ggplot2]; }; parsec = derive2 { name="parsec"; version="1.2.0"; sha256="0ilc9d6kv7zb0kwhpqqi3bjx3r1cihyfamphrw83p6zy3xhfmfs6"; depends=[igraph]; }; parsedate = derive2 { name="parsedate"; version="1.1.3"; sha256="0mg7hbm3903iwvmpn51gjpaaq03rsp72hjb1g8h5g84r81iha002"; depends=[]; }; parsemsf = derive2 { name="parsemsf"; version="0.1.1"; sha256="0ks4503k06ib5lq4ar2rg0sdni99rjcqxj76b0mclasxbi07kjsa"; depends=[DBI dbplyr dplyr lazyeval RSQLite stringr tidyr]; }; partDSA = derive2 { name="partDSA"; version="0.9.14"; sha256="1kp0cdsdjiay349jz22iqfzvspny8s343cfan8xahgf931k9h8p6"; depends=[survival]; }; partialAR = derive2 { name="partialAR"; version="1.0.11"; sha256="1x7vsrjn91nr4bbkzz9mp8h93j9yhwwaqw1abh5n3bsrkq3xmgqj"; depends=[data_table ggplot2 KFAS MASS plot3D Rcpp tseries urca zoo]; }; - partialCI = derive2 { name="partialCI"; version="1.1.1"; sha256="07c3484v8axqxss877dvb6d5gh4vrr8dbvcqgq2xgwb6wcs59nyy"; depends=[data_table ggplot2 glmnet KFAS MASS partialAR Rcpp TTR zoo]; }; + partialCI = derive2 { name="partialCI"; version="1.2.0"; sha256="0hi936yg4g5bg61ix2i68f8q4c5nvvshl2728ynz1rl970qfcrp7"; depends=[data_table ggplot2 glmnet KFAS MASS partialAR Rcpp TTR zoo]; }; partialOR = derive2 { name="partialOR"; version="0.9"; sha256="02vbvln8lswysaafpxq5rxb6crp7yhlc13i42kybv8fr10jaagjj"; depends=[nnet]; }; particles = derive2 { name="particles"; version="0.2.1"; sha256="0rhxn3c62x3xc9lcy7xbg6r7pgfylan7cz24v8i9icjhl7xfswmv"; depends=[digest dplyr igraph magrittr mgcv Rcpp rlang tidygraph]; }; - partitionComparison = derive2 { name="partitionComparison"; version="0.2.3"; sha256="1p0f08za30kpmj9ky4jw6i3nl38i7xrslwsj60ih7gvph2jd39ix"; depends=[lpSolve Rdpack]; }; + partitionComparison = derive2 { name="partitionComparison"; version="0.2.4"; sha256="07w1r4mdi8gv5bjj8shjdjbkply85pp7x5gnwxq96f9g1p4s24pz"; depends=[lpSolve Rdpack]; }; partitionMap = derive2 { name="partitionMap"; version="0.5"; sha256="0pi066xaaq0iqr0d7cncdzjd7bacmgrivc4qvhqx0y7q1vifrdjm"; depends=[randomForest]; }; partitionMetric = derive2 { name="partitionMetric"; version="1.1"; sha256="1wry9d3s814yp79ayab7rzf8z5l2mwpgnrc5j7d2sac24vp4pd48"; depends=[]; }; partitions = derive2 { name="partitions"; version="1.9-19"; sha256="1pklfnjdc094c8nzkqcdvqzdh8v3p5n8jbg4pf9678iw648saiyx"; depends=[gmp polynom]; }; partools = derive2 { name="partools"; version="1.1.6"; sha256="0w7p88y4ab4v14k16k95cyb5f3yl2g6ban11775rmi2h9xqkfxk8"; depends=[data_table pdist regtools]; }; partsm = derive2 { name="partsm"; version="1.1-2"; sha256="0cv3lgkdkn97bc85iwlv9w5pmqwwwsgb717zxnbgb5mzf4xn3f3g"; depends=[]; }; - party = derive2 { name="party"; version="1.3-0"; sha256="1ih3c85s40raq8a0cy952a3g31gf2iwnafy8ij1svzc4hgfzaw2m"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; + party = derive2 { name="party"; version="1.3-1"; sha256="13h8k2m933g9l4df1jjihn9i7ad0jrjyzga6chy0hb54xxi2asni"; depends=[coin modeltools mvtnorm sandwich strucchange survival zoo]; }; partykit = derive2 { name="partykit"; version="1.2-2"; sha256="118zrf9015kh0gicma98ddm80qhicdlhri2h1nwz0wlng9hkyxbg"; depends=[Formula inum libcoin mvtnorm rpart survival]; }; parviol = derive2 { name="parviol"; version="1.1"; sha256="1sfgic86ssd5wjf9ydss9kjd3m4jmm2d1v896sjsv8bydwymbpx3"; depends=[vioplot]; }; passport = derive2 { name="passport"; version="0.2.0"; sha256="1jiwivrz7781zmwxmw13rxl80cr9r5pinnk5bvqz8nhfmlx0zmgd"; depends=[]; }; @@ -9460,15 +9865,16 @@ in with self; { patentsview = derive2 { name="patentsview"; version="0.2.1"; sha256="104qq6cqvfk5m2yynpg5iwlp89y5qx18m20qp343mknxjbvqpjdg"; depends=[httr jsonlite]; }; pathClass = derive2 { name="pathClass"; version="0.9.4"; sha256="1vzmz3bml37wfxsjhkw9fip90sr1iv521ccr7nlf6xd30wavqywk"; depends=[affy Biobase igraph kernlab lpSolve ROCR svmpath]; }; pathdiagram = derive2 { name="pathdiagram"; version="0.1.9"; sha256="1j2h9mmwfi95nwhk9214kcfpb1qrmw249mjaza7i9gijmlicraxz"; depends=[shape]; }; - pathfindR = derive2 { name="pathfindR"; version="1.2.0"; sha256="1wf6wv9mdiagv3r4d5nviw8c2zxw7hlxa0mm9kk624g1qfhknnz2"; depends=[AnnotationDbi DBI doParallel foreach fpc ggplot2 knitr org_Hs_eg_db pathview rmarkdown shiny]; }; + pathfindR = derive2 { name="pathfindR"; version="1.2.3"; sha256="13n8jjzffhr0w7m0h23c16ayd8069ficsx6z98z459805ikzwv9y"; depends=[AnnotationDbi DBI doParallel foreach fpc ggplot2 knitr org_Hs_eg_db pathview rmarkdown shiny]; }; pathmapping = derive2 { name="pathmapping"; version="1.0.2"; sha256="0kx4wxf6lhi58sif8fzr5w4wa0i5253fq4v0ynp721fv1hkvmhvz"; depends=[]; }; pathmox = derive2 { name="pathmox"; version="0.2.0"; sha256="0hcllnpjjays35yngz309f1gcx9qg5z9h302kg9mhxs90470x4w0"; depends=[plspm tester]; }; pathological = derive2 { name="pathological"; version="0.1-2"; sha256="07g7ps6zfxi98y98kwas95rr5ybfd4bpih5mhkjafc7bn99254n2"; depends=[assertive_base assertive_files assertive_numbers assertive_properties assertive_reflection assertive_strings assertive_types magrittr plyr stringi]; }; + patrick = derive2 { name="patrick"; version="0.0.1"; sha256="16r0q3d9bq06393v46gabn9y9w2w7nqjcl65b7y2ryp35nv0aqsi"; depends=[dplyr purrr rlang testthat tibble]; }; patternator = derive2 { name="patternator"; version="0.1.0"; sha256="0s4vrhdfblllnhpz2awhhrkwm8d4170xg7fpsp7kvvqy8z8biwvi"; depends=[data_table]; }; patternize = derive2 { name="patternize"; version="0.0.1"; sha256="0xmz7ca555275a4x89vdmyk9x3m3sk964iwspv0dnxsmx5s1xmz7"; depends=[abind Morpho raster rgdal RNiftyReg sp]; }; patternplot = derive2 { name="patternplot"; version="0.2.1"; sha256="0ixb9x32fciwxwxnna47z9jb6s1zf3d9jqfiwvv4slaygi2cgydr"; depends=[dplyr ggplot2 gtable jpeg png R6 Rcpp RcppParallel]; }; pauwels2014 = derive2 { name="pauwels2014"; version="1.0"; sha256="1b7whn13lgydc69kg1fhnwkxirw0nqq75cfvii0yg0j4p8r1lw42"; depends=[deSolve ggplot2]; }; - pavo = derive2 { name="pavo"; version="1.3.1"; sha256="1vr3crp71dibm3jn88wh4gdia2l3z4aqmfns7v5pllqadk9s1064"; depends=[geometry mapproj pbmcapply rcdd]; }; + pavo = derive2 { name="pavo"; version="2.0.0"; sha256="1mcrx26lbhldmf1wlkpbpa4ld85wjbvr2kjidzb1hb78lqbv05ad"; depends=[geometry imager mapproj pbmcapply plot3D rcdd sp]; }; pawacc = derive2 { name="pawacc"; version="1.2.2"; sha256="0d5k0bq8zmb7sjvba3ljp97mba2iycnw44rnsnn2aajs02l1c2xg"; depends=[SparseM]; }; pawls = derive2 { name="pawls"; version="1.0.0"; sha256="01sf1cmd216ca5iwmw4hfnxi9lvh16r441cfcaa3n77zhq0i4w7n"; depends=[]; }; pbapply = derive2 { name="pbapply"; version="1.3-4"; sha256="0lk5kxac09xzdv6vf7ix6r5bfrm7cnpyr2l5mkd4igpciadszzfd"; depends=[]; }; @@ -9476,7 +9882,7 @@ in with self; { pbdBASE = derive2 { name="pbdBASE"; version="0.4-5.1"; sha256="0ghdq8ry6fiq8qj3plq2n8isjx6iacnhqd1z73bjckmvp99g221n"; depends=[pbdMPI pbdSLAP]; }; pbdDEMO = derive2 { name="pbdDEMO"; version="0.3-1"; sha256="0vr3dvvhr8j6xvdf308nn37y0lkl2ysm93yf0h7rclvqvsk1pf66"; depends=[pbdBASE pbdDMAT pbdMPI]; }; pbdDMAT = derive2 { name="pbdDMAT"; version="0.4-2"; sha256="1xiwfpi8r0l8jlfrc35aknm09y4qbn0hvvkscdpcxv9q7zifvl3v"; depends=[pbdBASE pbdMPI]; }; - pbdMPI = derive2 { name="pbdMPI"; version="0.3-6"; sha256="105nny9d4vm61iarckwf0x6lngkmg3jxys7nigshywhp91073ygk"; depends=[rlecuyer]; }; + pbdMPI = derive2 { name="pbdMPI"; version="0.3-8"; sha256="0yxzldgvjzzw4adsdv6sh3m3n6xlwfh2rmzn6pgppk8s1brbbjli"; depends=[rlecuyer]; }; pbdNCDF4 = derive2 { name="pbdNCDF4"; version="0.1-4"; sha256="0fd29mnbns30ck09kkh53dgj24ddrqzks4xrrk2hh1wiy7ap1h95"; depends=[]; }; pbdPROF = derive2 { name="pbdPROF"; version="0.3-1"; sha256="0a7c31605si062vbwcwngv770axlwyhh00cvdfqw3hv421p61sj8"; depends=[]; }; pbdRPC = derive2 { name="pbdRPC"; version="0.2-1"; sha256="1pz71zfs9qw96dj3h5mrm734vbbi4drlv9hrw91dbzm3a7jsxg4q"; depends=[]; }; @@ -9501,47 +9907,49 @@ in with self; { pcensmix = derive2 { name="pcensmix"; version="1.2-1"; sha256="1yrz4hdj52in8z65qyl18kh7frv75rb8ss5ljv3vbm6yhxi32jnd"; depends=[]; }; pcev = derive2 { name="pcev"; version="2.2.2"; sha256="1l0afcdzkxzkhkc8ln2fzi50hc7nfq46lg6hhx6rrzkb41w82iqw"; depends=[corpcor RMTstat]; }; pcg = derive2 { name="pcg"; version="1.1"; sha256="194j72hcp7ywq1q3dd493pwkn1fmdg647gmhxcd1jm6xgijhvv87"; depends=[]; }; + pcgen = derive2 { name="pcgen"; version="0.1.0.0"; sha256="151dhk1wnc5byrbvx2322bwy047ing3a9zw1q977w347r90h7arr"; depends=[ggm graph Hmisc lme4 MASS Matrix pcalg sommer]; }; pch = derive2 { name="pch"; version="1.3"; sha256="13pfrvp539fz4hxp08yil93caw3cjdna7xnky5fqd0lhc84fwq76"; depends=[survival]; }; pcnetmeta = derive2 { name="pcnetmeta"; version="2.6"; sha256="0rpd1bgg932xhj03fnskhbg7ni9nfd8qrvxvix8qmbgw8bwdsbgd"; depends=[coda rjags]; }; pco = derive2 { name="pco"; version="1.0.1"; sha256="0k1m450wfmlym976g7p9g8arqrvnsxgdpcazk5kh3m3jsrvrcchf"; depends=[]; }; - pcr = derive2 { name="pcr"; version="1.1.1"; sha256="1bm8c8ajb0imvnp8nwhskjkqdi4v9f11bsz2qdk45i5l2mq16kjc"; depends=[broom devtools dplyr ggplot2 magrittr purrr readr tidyr]; }; + pcr = derive2 { name="pcr"; version="1.1.2"; sha256="0sms024irkhqyb001lcicrm3dwnnyr2kw9kx10q3v9j6p7rxzhz2"; depends=[devtools dplyr ggplot2 magrittr purrr readr tidyr]; }; pcrcoal = derive2 { name="pcrcoal"; version="1.2.0"; sha256="0rd610ny8p7by3gi6kk130ii0qcswqsng5mzmxz8hrxqk0cs4c9x"; depends=[ape ggplot2 phylosim]; }; pcrsim = derive2 { name="pcrsim"; version="1.0.2"; sha256="04177xl513k01prmf93kha91dyxmb9v80d1y4lz73fxsifj6bhar"; depends=[data_table ggplot2 gWidgets mc2d plyr strvalidator]; }; pcse = derive2 { name="pcse"; version="1.9.1.1"; sha256="1rb9146vjkf36vc5v3frykmsff7kp6qp1hhmj8pak583in4rz8f8"; depends=[]; }; pdR = derive2 { name="pdR"; version="1.5"; sha256="072ra8czfvgcgkbdfkjhbpk7f23zh717f9sh84vls9j0wyrai6hn"; depends=[boot car coefplot lmtest papeR plm sandwich]; }; - pdSpecEst = derive2 { name="pdSpecEst"; version="1.2.1"; sha256="0j68jmsm6c9pan195k0l0nm1ldbipl5ywlbwkz61dblspizh04iw"; depends=[ddalpha multitaper Rcpp RcppArmadillo]; }; + pdSpecEst = derive2 { name="pdSpecEst"; version="1.2.3"; sha256="0kqph8134g1fyzc9b06nighkqsh6jjpckvwxhpslihj5sj3kapdd"; depends=[ddalpha multitaper Rcpp RcppArmadillo Rdpack]; }; pdc = derive2 { name="pdc"; version="1.0.3"; sha256="0503n7aiy0qrl790yfjvpm7bbyz1i4818rlg96q0fvzb58zqmyvc"; depends=[]; }; pder = derive2 { name="pder"; version="1.0-0"; sha256="097klk334bjhlss8x73f27l7jcp7d7vh10jr5sazm5kcvi95619i"; depends=[]; }; pdfCluster = derive2 { name="pdfCluster"; version="1.0-2"; sha256="0kbci54dlzn736835fh18xnf2pmzqrdmwa3jim29xcnwa1r2gklb"; depends=[geometry]; }; pdfetch = derive2 { name="pdfetch"; version="0.2.3"; sha256="1fcjhq79dcbnghmkfpy1h29gcywr1hq91xij5f21wgp4xx465sha"; depends=[curl httr jsonlite lubridate readr reshape2 XML xml2 xts zoo]; }; - pdfsearch = derive2 { name="pdfsearch"; version="0.1.1"; sha256="0k62j6ilv8rmmmasqyb3hklhjqg22jiyx0sxd7f8n0xmlfcjgfqi"; depends=[pdftools tibble]; }; + pdfsearch = derive2 { name="pdfsearch"; version="0.2.3"; sha256="1x6ymj6fk7bf2jx1lqryyzksg049ijdvb9syz244y43i7632ls59"; depends=[pdftools tibble tokenizers]; }; pdftables = derive2 { name="pdftables"; version="0.1"; sha256="1gnwjijr89cczchc7yi4w5xiw0dalbymvj23rymm8cfra34iwn5p"; depends=[httr]; }; pdftools = derive2 { name="pdftools"; version="1.8"; sha256="1yyhwr17bln59cr819igd7mxdy5mhqf5fwd68x8w3kgag0v0qyaz"; depends=[Rcpp]; }; pdist = derive2 { name="pdist"; version="1.2"; sha256="18nd3mgad11f2zmwcp0w3sxlch4a9y6wp8dfdyzvjn7y4b4bq0dd"; depends=[]; }; pdmod = derive2 { name="pdmod"; version="1.0.1"; sha256="04bk9gjg2c55hk6k1hy0m29927s8a5ig6mr4xb89npam68g0pcms"; depends=[mco]; }; - pdp = derive2 { name="pdp"; version="0.6.0"; sha256="12x9j3lwnss45wlafd5kc4nw293vhffijmgyafahqwz9if829m10"; depends=[ggplot2 gridExtra lattice magrittr mgcv plyr viridis]; }; + pdp = derive2 { name="pdp"; version="0.7.0"; sha256="0wcszaq4c14f9a2r1gd32mzhs035jlg2w8mkfklzigcj7fv9xmi8"; depends=[ggplot2 gridExtra lattice magrittr mgcv plyr viridis]; }; pds3 = derive2 { name="pds3"; version="0.5.0"; sha256="1hipi4ygk30khrrslxq3m9qdichazhrl34k444shs7gi6wjx9ilr"; depends=[rly]; }; peRiodiCS = derive2 { name="peRiodiCS"; version="0.5.0"; sha256="1366gmn6qfciwcjsfnbl3hfa16ffn11g00fm0kv74ilvm3nnawk3"; depends=[Hmisc rms]; }; peacots = derive2 { name="peacots"; version="1.3"; sha256="128qpz06b0giz80lp9yq9l6pxcjglfr97yickg7z64vzzl2jilmq"; depends=[]; }; + peakPantheR = derive2 { name="peakPantheR"; version="1.2.0"; sha256="1g9hj7z99cn0qgyxl4p6fln9mi95q87d25h8n32vlz7n1sv5jhiy"; depends=[doParallel foreach ggplot2 gridExtra minpack_lm MSnbase mzR scales stringr XML]; }; peakPick = derive2 { name="peakPick"; version="0.11"; sha256="1zf7ff9arm4hkdxrfhb0p8p7npd51icy773g2raaqsfys825xwhm"; depends=[matrixStats]; }; peakRAM = derive2 { name="peakRAM"; version="1.0.2"; sha256="0mj7f8jqkfky61xag2km0svbgvfmif3c1d8ccav6pv1963cg3cvv"; depends=[]; }; pear = derive2 { name="pear"; version="1.2"; sha256="1ixmyzm72s18qrfv2m8xzh5503k1q90lhddq4sp46m0q7qyxb192"; depends=[]; }; pearson7 = derive2 { name="pearson7"; version="1.0-2"; sha256="0x8bnlzgmfah8lzdg8skxs7bm8yq0nkrhqi7q43h902j4jl5b8jy"; depends=[]; }; - pec = derive2 { name="pec"; version="2018.04.18"; sha256="0a6q37l42zbz566bz0qs5aszd71bb0kd9bz0zmb42q0ak0v4yijd"; depends=[foreach prodlim rms survival timereg]; }; + pec = derive2 { name="pec"; version="2018.07.26"; sha256="07xr22klvmxpn2k72mjd775fs89f5hppb5xcy4sjy1njalmn3icm"; depends=[foreach prodlim rms survival timereg]; }; pedantics = derive2 { name="pedantics"; version="1.7"; sha256="14hphziwqrq4fkxlvp94j564q19k9fabvhmdz7zhb6cvak6xv1n6"; depends=[genetics kinship2 MasterBayes MCMCglmm mvtnorm]; }; pedgene = derive2 { name="pedgene"; version="2.9"; sha256="1200d6blz7n3krnvhw0i9mz6219vwk0vlj17yzr3fqzyn5cyf91z"; depends=[CompQuadForm kinship2 Matrix survey]; }; pedigree = derive2 { name="pedigree"; version="1.4"; sha256="1dqfvzcl6f15n4d4anjkd0h8vwsbxjg1lmlj33px8rpp3y8xzdgw"; depends=[HaploSim Matrix reshape]; }; pedigreemm = derive2 { name="pedigreemm"; version="0.3-3"; sha256="1bpkba9nxbaxnivrjarf1p2p9dcz6smf9k2djawis1wq9dhylvsb"; depends=[lme4 Matrix]; }; pedometrics = derive2 { name="pedometrics"; version="0.6-6"; sha256="1w9wa73wva6z0d56g221l8qmc5igfypwsa2xq4sn4r501bdy8qpq"; depends=[lattice latticeExtra Rcpp]; }; - pegas = derive2 { name="pegas"; version="0.10"; sha256="1qs2wxbgsraa6vqi7fh391hq2i4g1ysb06q4xqk0rkaymy5bp8ga"; depends=[adegenet ape]; }; + pegas = derive2 { name="pegas"; version="0.11"; sha256="0l21bapzbjcvblbvks3jh9rpy9hng1ccd7f0glhqw695lc737bpx"; depends=[adegenet ape]; }; pems_utils = derive2 { name="pems.utils"; version="0.2.17.8"; sha256="1qxsjzxb8gdw1hyxgd923s609k98pjdaxs6wm3pg4bl1w8sxqi8d"; depends=[ggplot2 lattice latticeExtra loa plyr RColorBrewer]; }; penDvine = derive2 { name="penDvine"; version="0.2.4"; sha256="0znpvsr7zy2wgy7znha1qiajcrz1z6mypi3f5hpims33z7npa7dl"; depends=[doParallel fda foreach lattice latticeExtra Matrix quadprog TSP]; }; penMSM = derive2 { name="penMSM"; version="0.99"; sha256="1xdcxnagvjdpgnfa5914gb41v5y4lsvh63lbz1d2l8bl9mpff3lm"; depends=[Rcpp]; }; - penalized = derive2 { name="penalized"; version="0.9-50.1"; sha256="0lhibn0bzdrlvdsp4ni0989jniyfbxnixh32g7qm5qwxf5jbky18"; depends=[Rcpp RcppArmadillo survival]; }; + penalized = derive2 { name="penalized"; version="0.9-51"; sha256="1zcrwa93mc27qj3g4ayc2k895r6g8q0g6qb2azmvj7wqk750va7a"; depends=[Rcpp RcppArmadillo survival]; }; penalizedLDA = derive2 { name="penalizedLDA"; version="1.1"; sha256="1bw5wiixmmg1vr3v0d59vh67f0gy2rvr30bi58skvrkb25qcjq6l"; depends=[flsa]; }; - penalizedSVM = derive2 { name="penalizedSVM"; version="1.1"; sha256="0zc36cgcrdy4rwhg4hhhahymqfalvc5v2zmqq56ikz5blln82qvq"; depends=[corpcor e1071 lhs MASS mlegp statmod tgp]; }; - penaltyLearning = derive2 { name="penaltyLearning"; version="2017.12.08"; sha256="0pkd853dq7frp0f9aii99qpnx9mk4gzb73iykfa5q9bnp45z8qd0"; depends=[data_table geometry ggplot2]; }; - pencopula = derive2 { name="pencopula"; version="0.3.5"; sha256="1cy36pprbrfabk9n3x4d1xbj1vd2dda7xq3ihj2hzniwn77j63wi"; depends=[fda lattice latticeExtra quadprog]; }; + penalizedSVM = derive2 { name="penalizedSVM"; version="1.1.2"; sha256="03zw95bc6svbnzak9x72s3b8l9gh581mxn2di1fl89gxlh864amd"; depends=[corpcor e1071 lhs MASS mlegp statmod tgp]; }; + penaltyLearning = derive2 { name="penaltyLearning"; version="2018.09.04"; sha256="07ddsq6bwbz0c9pixlw8gj1km6zqhqsqn1a19pgmjrr5mq1iix9p"; depends=[data_table geometry ggplot2]; }; + pencopula = derive2 { name="pencopula"; version="0.3.5.1"; sha256="1ivnqfq70gvnzc19brkvdlq0ks5dd954dj46j3pqpg6crvdrzh9r"; depends=[fda lattice latticeExtra quadprog]; }; pencopulaCond = derive2 { name="pencopulaCond"; version="0.2"; sha256="18hjjxnd0l2ms20ddqkghfbd4as5kq2rgwqzpz4y38k6nw76x511"; depends=[doParallel fda foreach igraph lattice latticeExtra pacotest quadprog TSP]; }; pense = derive2 { name="pense"; version="1.2.0"; sha256="0wilfjhkj5hrgm7mak1hvlk07wrr3f774w26vyvbwlm8xsxxsbzz"; depends=[Matrix Rcpp RcppArmadillo robustbase]; }; pensim = derive2 { name="pensim"; version="1.2.9"; sha256="10nrnxwfs41bhybs7j6xgnx0pq3c802n9k8irngmh8iy4w3wbhrq"; depends=[MASS penalized]; }; @@ -9550,7 +9958,7 @@ in with self; { pequod = derive2 { name="pequod"; version="0.0-5"; sha256="0mwrgyrxgiifpnpy15qxpdrdmd7dxqihccrnj5nh8fq9fvwymamg"; depends=[car ggplot2]; }; perARMA = derive2 { name="perARMA"; version="1.6"; sha256="0k70lcqhiiffrwzvh51asnhx68qxpnjnxadarvgpgbc7kfy7lv9x"; depends=[corpcor gnm matlab Matrix signal]; }; perccal = derive2 { name="perccal"; version="1.0"; sha256="1akak068d0g70amj5sbvnqbywzy21l4wz11mhp71b7cp4xmr9n12"; depends=[Rcpp RcppArmadillo RcppEigen]; }; - perccalc = derive2 { name="perccalc"; version="1.0.1"; sha256="0dq5m7d6jdapbnkh65f5cizqiggpl1922nl4gc6damzvyym95qrj"; depends=[broom dplyr magrittr multcomp purrr tibble tidyr]; }; + perccalc = derive2 { name="perccalc"; version="1.0.3"; sha256="0x895b75fjipzv7ff9mz7qpcabm9zys3bjsalk6h2q2350lwjmq1"; depends=[broom dplyr magrittr multcomp purrr tibble tidyr]; }; performanceEstimation = derive2 { name="performanceEstimation"; version="1.1.0"; sha256="08jx2zl6xh0rp54xa70gb717wbfdzfrx9b47i3b3ly41qaf85vrc"; depends=[dplyr ggplot2 parallelMap tidyr]; }; pergola = derive2 { name="pergola"; version="1.0"; sha256="1650ipp2b455xdkznwm7bnxvimad7nbyr9i1lg2vdh64j1qfh7gl"; depends=[seriation]; }; perm = derive2 { name="perm"; version="1.0-0.0"; sha256="0075awl66ynv10vypg63fcxk33qzvxddrp8mi4w08ysvimcyxijk"; depends=[]; }; @@ -9558,32 +9966,33 @@ in with self; { permGPU = derive2 { name="permGPU"; version="0.14.9"; sha256="10r2qxbvzjxv3520lrn6cwi5akhhwgkhz7yaqxi5vh2f5l0s49wy"; depends=[Biobase foreach RUnit survival]; }; permGS = derive2 { name="permGS"; version="0.2.5"; sha256="0d2kp3c1fmnjjmsvc2qwh6m66yqvy2vrrxgv1fj2i4clsbavfa0y"; depends=[coin survival]; }; permPATH = derive2 { name="permPATH"; version="1.1"; sha256="06h1lqpmkg4ajjh4r837qp094h105n4mpvafnp2nsbv9yyayd4h8"; depends=[R2HTML xtable]; }; - permubiome = derive2 { name="permubiome"; version="1.1"; sha256="02fg1g96pg6a87n8mhrls54xp0vnqqsgg39nnjirxr7hd74l71x9"; depends=[ggplot2]; }; + permubiome = derive2 { name="permubiome"; version="1.2"; sha256="0np10qhj5rl2gjmq5sfnpaqymmr0wag2b8fwyzndjflvypfmcsyp"; depends=[ggplot2]; }; permuco = derive2 { name="permuco"; version="1.0.1"; sha256="19spn5ra41v7s4ixdg5pbksfi8linhvhvfmllz72iw6wbzsw8m0m"; depends=[MASS Matrix permute]; }; permutations = derive2 { name="permutations"; version="1.0-2"; sha256="04lak21x0z1cskgm5w4xdyq59kmyrz64bwfpf332vfka54aiv8lk"; depends=[magic numbers partitions]; }; permute = derive2 { name="permute"; version="0.9-4"; sha256="1w8wzk1fg9q7wvisnfp2js70dg0m9wi12gkdhpyngpbdcgssahd5"; depends=[]; }; permutes = derive2 { name="permutes"; version="0.1"; sha256="1m5596l80nyyzassiwb6zd2fnp2jglj5vkp9xsbp28swd0q2wd90"; depends=[ggplot2 lmPerm plyr viridis]; }; perry = derive2 { name="perry"; version="0.2.0"; sha256="1lfmcq2xsxmfs7cxvhgxcsggslgjicbaks4wcjw1yjh67n559j46"; depends=[ggplot2 robustbase]; }; persiandictionary = derive2 { name="persiandictionary"; version="1.0"; sha256="0rgi36ngpiax3p5zk4cdgf3463vgx7zg5wxscs2j7834yh37jwax"; depends=[]; }; - personalized = derive2 { name="personalized"; version="0.1.5"; sha256="1id3ml5n7l7lgd029csn23ffrsqhm4g1id20hxqhqz4knknfxkkf"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; }; + personalized = derive2 { name="personalized"; version="0.2.1"; sha256="0qdbnra2ghz3i5xl4gw8ivalci1mqw0qblxvw3mfp0sbj4hvsssy"; depends=[foreach gbm ggplot2 glmnet kernlab mgcv plotly survival]; }; personograph = derive2 { name="personograph"; version="0.1.3"; sha256="07lrlbw4222l1d5rwn0hfqliyk8sqjf6ipz4n2zwcbk113bb8sy7"; depends=[grImport]; }; perspectev = derive2 { name="perspectev"; version="1.1"; sha256="175s1nq5z4gfs5qb39lq230g6n0v8fxzs5hr9j2rgx0knpbjfq03"; depends=[ape boot doParallel foreach ggplot2 mapproj sp]; }; perturb = derive2 { name="perturb"; version="2.05"; sha256="18ydmmp8aq4rf9834dmsr4fr9r07zyn97v8a1jqz3g9njza983la"; depends=[]; }; - perturbR = derive2 { name="perturbR"; version="0.1.1"; sha256="13in5xjv1854ihalyj4427ix4scc17b95iw72rcb4yivha9jgplq"; depends=[dils ggplot2 igraph mcclust]; }; + perturbR = derive2 { name="perturbR"; version="0.1.2"; sha256="0hb4bbcij5x9nbvmwr0j59x1hsnf9ddyhkixnbwvmbsha0nkcbww"; depends=[ggplot2 igraph]; }; petitr = derive2 { name="petitr"; version="1.0"; sha256="0i13zhdrdka0ij0khdzj6ylvvcn4wxvplb8a368i1s64cpgak30c"; depends=[]; }; petrinetR = derive2 { name="petrinetR"; version="0.2.0"; sha256="04alyjjnwgkbd4qigxki57v3hqa02vr1d5g7slp5njds1vk928ci"; depends=[DiagrammeR dplyr purrr visNetwork xml2]; }; - petro_One = derive2 { name="petro.One"; version="0.1.3"; sha256="13bxd011lprimy5m3z08l4yng2fkp28b1ad1bqs0piffx5bxw13n"; depends=[cluster data_table dplyr ggplot2 graph magrittr RColorBrewer Rgraphviz rvest RWeka tibble tm urltools wordcloud xml2]; }; pewdata = derive2 { name="pewdata"; version="0.2.0"; sha256="17j8fdn9x6hannr91zyccya523z3zm03gr517xfcyrd0m486xnqb"; depends=[httr magrittr purrr rvest]; }; pez = derive2 { name="pez"; version="1.1-1"; sha256="14n9s604wwh07kjir5kw6sra6bbmnpg00h3zvli3zqd8lx892hm8"; depends=[ade4 ape apTreeshape caper FD Matrix mvtnorm picante quantreg vegan]; }; pfa = derive2 { name="pfa"; version="1.1"; sha256="0ikdd7ps8wnjp9nm66w447m06hqxnnk553jglxikl2w5d9vk6b31"; depends=[lars POET quantreg]; }; pgam = derive2 { name="pgam"; version="0.4.15"; sha256="12llflsb32dfvxl3nbyb9bsl9bmd35g5g163hd3axzmg1bgi21ls"; depends=[]; }; - pgbart = derive2 { name="pgbart"; version="0.6.11"; sha256="1xfbpbxqynglw7j311pmx3qsi40r0416yflklh0qggr3pq0qf88k"; depends=[BayesTree]; }; + pgbart = derive2 { name="pgbart"; version="0.6.12"; sha256="0ykxdrjwswh6kwrs5f83ifqyf23hgq6q73aidmsh1p9iwaxg429r"; depends=[BayesTree]; }; + pgdraw = derive2 { name="pgdraw"; version="1.0"; sha256="1ips7wxksk69rgirgmd7aqqdf34qis6692wvn7npyzq9y24gwkmb"; depends=[Rcpp]; }; pgee_mixed = derive2 { name="pgee.mixed"; version="0.1.0"; sha256="115vvpv54q80486i3xs2yhmfyx476cf4g1v43q6l7wj3jwzcrvbg"; depends=[copula mvtnorm Rcpp RcppArmadillo]; }; pgirmess = derive2 { name="pgirmess"; version="1.6.9"; sha256="1i1qn68isaz2lbpqyydjgj9kri09aknza5qjn6m1wa1alyl7f611"; depends=[boot maptools rgdal rgeos sp spdep splancs]; }; pglm = derive2 { name="pglm"; version="0.2-1"; sha256="14hnlidf62kzcf83jc7k17n4hjjaj82scdwh8a7qxd056vygkqx2"; depends=[maxLik plm statmod]; }; pgmm = derive2 { name="pgmm"; version="1.2.2"; sha256="1z39148gvs5nndd54x2afpsqdyqd8apjgnxn0ndv2071aa8gyk1j"; depends=[]; }; pgnorm = derive2 { name="pgnorm"; version="2.0"; sha256="1k9z7pvmranr8m62v7amc0pj6lwzh3wqi79gg3mflifn1mr6c057"; depends=[]; }; pgraph = derive2 { name="pgraph"; version="0.8"; sha256="1r784snci5m81qljfh1r3w8qzszmy0476zvsd1alh43afzg9zpr5"; depends=[energy glasso glmnet SAM]; }; + pgsc = derive2 { name="pgsc"; version="1.0.0"; sha256="1y4szqn1jhp3yn8q738dpbhnqcqk45vgbmczamai154w3wb0qai7"; depends=[nloptr Rcpp RcppArmadillo reshape2]; }; ph2bayes = derive2 { name="ph2bayes"; version="0.0.2"; sha256="1xm7930gycxrz308dnfnp023yidqik52sbrli35f3773mnfcid2g"; depends=[Rcpp]; }; ph2bye = derive2 { name="ph2bye"; version="0.1.4"; sha256="0h5d8d4bagkp6g0nb67cb225ki5p1amnclnfj6afgdcsli5clr67"; depends=[animation nleqslv Rcpp VGAM]; }; ph2hetero = derive2 { name="ph2hetero"; version="1.0.2"; sha256="0aphkdb0ka8lk9q3r4ivkv4hrn7xz62rgqdbpkcwh9s455n38nyi"; depends=[clinfun mvtnorm]; }; @@ -9591,8 +10000,8 @@ in with self; { phangorn = derive2 { name="phangorn"; version="2.4.0"; sha256="0xc8k552nxczy19jr0xjjagrzc8x6lafasgk2c099ls8bc1yml1i"; depends=[ape fastmatch igraph magrittr Matrix quadprog Rcpp]; }; phantom = derive2 { name="phantom"; version="0.1.3"; sha256="0kgw65jziw5s03isq5ywmqijhkbik5i84k30hx5gbi0zzgj8y0h1"; depends=[gplots MASS NMF qusage RColorBrewer Rcpp RcppArmadillo]; }; phase1RMD = derive2 { name="phase1RMD"; version="1.0.8"; sha256="1wvlajsqb8y8f30asq1lyk87kmakh2risnky98g5gday765y90qa"; depends=[arrayhelpers boot coda ggplot2 mvtnorm rjags]; }; - phaseR = derive2 { name="phaseR"; version="1.3"; sha256="1hwclb7lys00vc260y3z9428b5dgm7zq474i8yg0w07rxqriaq2h"; depends=[deSolve]; }; - phateR = derive2 { name="phateR"; version="0.2.8"; sha256="17wlfdcfb14wxv3j45pd5672g5b2w858b65z6x3ck4hi2v8kz19v"; depends=[ggplot2 Matrix reticulate]; }; + phaseR = derive2 { name="phaseR"; version="2.0"; sha256="14shpsyrcz1j0bl60vh37cpcvmry48s76xlf4f9lmq4l5vynhrcn"; depends=[deSolve]; }; + phateR = derive2 { name="phateR"; version="0.2.9"; sha256="0zsi047rm0vi5ap4aaiab0ll19xarbg31k4q3fs3dcmsnqg1nrj1"; depends=[ggplot2 Matrix reticulate]; }; phcfM = derive2 { name="phcfM"; version="1.2"; sha256="0i1vr8rmq5zs34syz2vvy8c9603ifzr9s5v2izh1fh8xhzg7655x"; depends=[coda]; }; pheatmap = derive2 { name="pheatmap"; version="1.0.10"; sha256="1jzxs5hwbz3r0z2pp09i7fd14sndxnrbm3zibaac3kny4nzydzf7"; depends=[gtable RColorBrewer scales]; }; phenability = derive2 { name="phenability"; version="2.0"; sha256="0can8qgdpfr4h6jfg23cnwh7hhmwv6538wg2jla9w138la7rhpd1"; depends=[calibrate]; }; @@ -9601,8 +10010,8 @@ in with self; { pheno = derive2 { name="pheno"; version="1.6"; sha256="0xdya1g1ap7h12c6zn3apbkxr725rjhcp4gbdchkvcnwz4y9vw8c"; depends=[nlme quantreg SparseM]; }; pheno2geno = derive2 { name="pheno2geno"; version="1.4.0"; sha256="0fy8z6x1y0sakp07jb6zs0w0f86pbbllicj4qylxzfd5rpn1rqr0"; depends=[mixtools qtl VGAM]; }; phenoCDM = derive2 { name="phenoCDM"; version="0.1.3"; sha256="1cyqwc36zwa2a4ljy0xnqz0hhw0r98qk2an5y002lrchkqydplwp"; depends=[rjags]; }; - phenocamr = derive2 { name="phenocamr"; version="1.1.0"; sha256="10k7z82skkf9l15a2b77ygg5lkg0x68z7xbkw4p3mgs68dd9ah63"; depends=[changepoint curl daymetr DT jsonlite leaflet plotly shiny shinydashboard zoo]; }; - phenology = derive2 { name="phenology"; version="7.0"; sha256="1glbjm7i2kyl04k0sam29zy1lpzfq2mpkgg44jpnby8c9vz8pkmi"; depends=[HelpersMG lmf numDeriv optimx]; }; + phenocamr = derive2 { name="phenocamr"; version="1.1.1"; sha256="1ic0w9rfh0s50b9kzwmcqam51vibq9ji19vkcscz10grdbwjc502"; depends=[changepoint daymetr httr jsonlite shiny zoo]; }; + phenology = derive2 { name="phenology"; version="7.2"; sha256="0p39xihqlcapgsb6j90g9hal1jjrd9fra639hxc5gw4kl8nhlndq"; depends=[HelpersMG lmf numDeriv optimx]; }; phenomap = derive2 { name="phenomap"; version="1.2.1"; sha256="0kpngxqrbahild5nblfvgx2kna43hqqldx5q3b127dnqwzbhfvbb"; depends=[doParallel dplyr phenex plyr raster rgdal stringr]; }; phenopix = derive2 { name="phenopix"; version="2.3.1"; sha256="1yy163nh2b74m0v7f2gkgxaplvw4whs2h30bkw4chl0zyrcrci86"; depends=[bcp doParallel foreach gtools iterators jpeg plyr raster SDMTools sp stringr strucchange zoo]; }; phiDelta = derive2 { name="phiDelta"; version="1.0.1"; sha256="0g1g5516p8i1gfpvsy75rdirib8sx1ki2mbf1cvgsnzh70h72gbv"; depends=[]; }; @@ -9611,10 +10020,10 @@ in with self; { phonR = derive2 { name="phonR"; version="1.0-7"; sha256="0al2cbynnbvmd90lk1w1g1ppslqq0ng8vbb6bl7m4kqwd2lgv056"; depends=[deldir plotrix splancs]; }; phonTools = derive2 { name="phonTools"; version="0.2-2.1"; sha256="01i481mhswsys3gpasw9gn6nxkfmi7bz46g5c84m13pg0cv8hxc7"; depends=[]; }; phonenumber = derive2 { name="phonenumber"; version="0.2.2"; sha256="1m5idp538lvynmfp8m7l89js6hk5lpp26k419bdvj3hd3ap0n9lg"; depends=[]; }; - phonics = derive2 { name="phonics"; version="1.0.0"; sha256="02bkw589iijlzbw0cbg9qhq99jij2p92cqrxa77chkly4naqkqds"; depends=[BH Rcpp]; }; - photobiology = derive2 { name="photobiology"; version="0.9.21"; sha256="02516yl2fgfnswyfrhq8s229bniv81ml5vkdq7ap17a2g4v92hvc"; depends=[caTools dplyr lubridate plyr polynom rlang splus2R tibble]; }; + phonics = derive2 { name="phonics"; version="1.1.0"; sha256="02h26dlhw0hisr2ifa1rkrzw0350pk32mrba7h1rwsh41vxv9sji"; depends=[BH Rcpp]; }; + photobiology = derive2 { name="photobiology"; version="0.9.24"; sha256="10z9bplknis5zp6m5ayggr7pilv0pkbgyl2hs4qfmddby7cfmbsj"; depends=[dplyr lubridate plyr polynom rlang splus2R tibble zoo]; }; photobiologyFilters = derive2 { name="photobiologyFilters"; version="0.4.4"; sha256="14aiw5jxd6wnngy1rbbm85l0yx64nxrancal017wvr5n867c32d6"; depends=[photobiology]; }; - photobiologyInOut = derive2 { name="photobiologyInOut"; version="0.4.14"; sha256="1q0dd3szr06rm6zy2mkb37n4s37554x71jgkhmw88iiy58y2fkv5"; depends=[colorSpec dplyr hyperSpec lazyeval lubridate pavo photobiology readr readxl tibble tidyr]; }; + photobiologyInOut = derive2 { name="photobiologyInOut"; version="0.4.17-1"; sha256="1m2hjpjciqc1r53qflv7ci2n7jnng11aij8wz91nzi0y0ypics60"; depends=[colorSpec dplyr hyperSpec lazyeval lubridate photobiology readr readxl stringr tibble tidyr]; }; photobiologyLEDs = derive2 { name="photobiologyLEDs"; version="0.4.3-1"; sha256="0inhl6ba1fzkak4752m60hkm6fzapzyz5kchvz18yv33dmm13v1c"; depends=[photobiology]; }; photobiologyLamps = derive2 { name="photobiologyLamps"; version="0.4.2"; sha256="0fcin04xc2k39qdipslqd3w3bsd8yl3xlvg7mlgm3aphfwg4hnmj"; depends=[photobiology]; }; photobiologyPlants = derive2 { name="photobiologyPlants"; version="0.4.1"; sha256="0mpb5sv4wkvqzbhf193zkhap44yzlhxrnjx1p3j9iyjdg4bb1kka"; depends=[photobiology photobiologyWavebands]; }; @@ -9622,10 +10031,10 @@ in with self; { photobiologySun = derive2 { name="photobiologySun"; version="0.4.0"; sha256="0aczf1ki623pflsnn08z0nrsx7wwn67b8ql08ar08rpk1bj93nfy"; depends=[photobiology]; }; photobiologyWavebands = derive2 { name="photobiologyWavebands"; version="0.4.2"; sha256="0l1784xi9hzsxmiqipv0zkb4lq1xd9f890rzsgsjb0km6js5x3q7"; depends=[photobiology]; }; phrasemachine = derive2 { name="phrasemachine"; version="1.1.2"; sha256="1145c8ymarhbza8253rw4ybnq0k5pcckqxpdcr8s2y23pj182r1p"; depends=[NLP openNLP stringr]; }; - phreeqc = derive2 { name="phreeqc"; version="3.3.10"; sha256="0hcdjj1wgfknqf5yx50b9vz5f72siw4dslyvk2xbrfnwbzzz4qib"; depends=[]; }; + phreeqc = derive2 { name="phreeqc"; version="3.4.9"; sha256="0g3xlpwzb6vxz129kh7krf2lbhx6bgwmyjxk09mrzxzh3r5lqd9y"; depends=[]; }; phtt = derive2 { name="phtt"; version="3.1.2"; sha256="1fvvx5jilq5dlgh3qlfsjxr8jizy4k34a1g3lknfkmvn713ycp7v"; depends=[pspline]; }; phuassess = derive2 { name="phuassess"; version="1.1"; sha256="0jplj9gih32dllx2hw5aqvc9b94sbrbv66s3a5r8mdbpjh93rhng"; depends=[]; }; - phuse = derive2 { name="phuse"; version="0.1.5"; sha256="0cl36yxxhadg5rwdz3pxzqly52bv5510rr5ijyzb0x24l7zx6pjk"; depends=[git2r RCurl rlist shiny yaml]; }; + phuse = derive2 { name="phuse"; version="0.1.6"; sha256="1abfpnf5z88gg0cylfh7j4226yniw3sgx08asrr7xxq6ri0yxl4w"; depends=[git2r httr RCurl rlist shiny yaml]; }; phybreak = derive2 { name="phybreak"; version="0.2.0"; sha256="0vapc0w308wv1cd72p2xbj3q7jfnxwp08g5g8855a38pcn3njbfg"; depends=[ape phangorn Rcpp stringr]; }; phyclust = derive2 { name="phyclust"; version="0.1-22"; sha256="0c3w1vafhcshnh5lkb6bykk6w7w91qigz3sf215zqmrra1acri0d"; depends=[ape]; }; phyext2 = derive2 { name="phyext2"; version="0.0.4"; sha256="0j871kgqm9fll0vdgh071z77ib51y8pxxm0ssjszljvvpx1mb8rb"; depends=[ape phylobase]; }; @@ -9639,31 +10048,34 @@ in with self; { phyloland = derive2 { name="phyloland"; version="1.3"; sha256="10g40m6n2s4qvnzlqcwpy3k0j7bxdp79f586jj910b8p00ymrksp"; depends=[ape]; }; phylolm = derive2 { name="phylolm"; version="2.6"; sha256="0vah8ibicldi57wab4sk1kx7gdq6h34bm6swmxzhq7kikxfwmmyj"; depends=[ape future_apply]; }; phylometrics = derive2 { name="phylometrics"; version="0.0.1"; sha256="1pmr6l3wmaf91wdlsc5m63l07fibngnly2qzkma0rdi463ii03il"; depends=[mvtnorm]; }; - phylopath = derive2 { name="phylopath"; version="1.0.0"; sha256="1n6f7piygps3pwqapsvqpz764995kxhdqz1hc5n6znvl01ykdqx5"; depends=[ape dplyr ggm ggplot2 ggraph igraph MuMIn pbapply phylolm purrr tibble tidyr]; }; + phylopath = derive2 { name="phylopath"; version="1.0.1"; sha256="135b0zhspjns8jdb2y5ajhziyglkr9f5x1618i71dr5848mfkpha"; depends=[ape dplyr ggm ggplot2 ggraph igraph MuMIn pbapply phylolm purrr tibble tidyr]; }; phyloseqGraphTest = derive2 { name="phyloseqGraphTest"; version="0.0.2"; sha256="1xgv2kf7j3ia5vk10r7w9588rfv7asdaf8f3yxwp5q7aqn3krm6q"; depends=[ggnetwork ggplot2 igraph intergraph phyloseq]; }; phylosignal = derive2 { name="phylosignal"; version="1.2"; sha256="0apsg4v1n58wn8y8wnl6x1ahl903i29hh8bs2dw6ky2jafkjj4jb"; depends=[adephylo ape boot DBI igraph phylobase Rcpp RcppArmadillo]; }; phylosim = derive2 { name="phylosim"; version="3.0.2"; sha256="148zm43cgdhr264ffcabjx4abykks07jix6lypqysqy25fbmdngk"; depends=[ape compoisson ggplot2 R_methodsS3 R_oo]; }; + phylotaR = derive2 { name="phylotaR"; version="1.0.0"; sha256="0plxc3l9fxxj9mfnhnpp5wrxyvxm292fxrwx2g8xysasmjb301v9"; depends=[ggplot2 igraph R_utils rentrez sys treeman treemapify XML]; }; phylotate = derive2 { name="phylotate"; version="1.2"; sha256="19nssrdax5w5a50159j39jgs7305s48k3h56ivyzs5di6l7x1yxj"; depends=[]; }; phylotools = derive2 { name="phylotools"; version="0.2.2"; sha256="1dhk1ncp5zi4zl1xfnjz64v983dm7bq7iimfjin80j0bdcpps44w"; depends=[ape]; }; - phyndr = derive2 { name="phyndr"; version="0.1.0"; sha256="03y3j4ik6flrksqm2dwh2cihn12hzfdik0fsak4zbxjdzaqn5gim"; depends=[ape]; }; phyreg = derive2 { name="phyreg"; version="1.0.2"; sha256="0m1psq79zl7h8791pl8g6i0ybda7vgddza8r9mwqhg4sw1q4bzcp"; depends=[]; }; - physiology = derive2 { name="physiology"; version="0.2.2"; sha256="0z394smbnmlrnp9ms5vjczc3avrcn5nxm8np5y58k86x470w6npz"; depends=[]; }; - phytools = derive2 { name="phytools"; version="0.6-44"; sha256="1y815pv1cksj244vcb7q4qr45gzr4cb1qwi166h65ryggywcj48w"; depends=[animation ape clusterGeneration coda combinat maps MASS mnormt msm nlme numDeriv phangorn plotrix scatterplot3d]; }; + physiology = derive2 { name="physiology"; version="1.0.1"; sha256="01vza10gfcab8xxq5xszg7yxnsg3cg1x9yhz05jdy34xir7p1jvf"; depends=[Rcpp]; }; + phytools = derive2 { name="phytools"; version="0.6-60"; sha256="0xxk2r2x81nxsvyggk44fpw3ppfsmmna8lrsy2xpw90da5cxgjjm"; depends=[animation ape clusterGeneration coda combinat expm maps MASS mnormt nlme numDeriv phangorn plotrix scatterplot3d]; }; phytotools = derive2 { name="phytotools"; version="1.0"; sha256="049znviv2vvzv23biy1l28axm7bc7biwmq4bnn0cnjqgkk48ysz3"; depends=[FME insol]; }; picante = derive2 { name="picante"; version="1.7"; sha256="0qhaxxmab3c3qw06kx4swfyiqiiqail5h79aarvffryvh0qdgr3m"; depends=[ape nlme vegan]; }; - picasso = derive2 { name="picasso"; version="1.2.0"; sha256="1bclrv0g2frdw6bfqacjbbzn9vg3354i2bh5zn6hkix7r8rqymzg"; depends=[MASS Matrix]; }; + picasso = derive2 { name="picasso"; version="1.3.0"; sha256="1s8whczkrxayw6syb4ffgfrxmcflxn31d53bdy9gxzndjd9rpd50"; depends=[MASS Matrix]; }; pid = derive2 { name="pid"; version="0.36"; sha256="1w6h09ddq8rv7k5xl4v6nhlkm0vnmim57mg0dzk2dv9dc4v8i141"; depends=[DoE_base FrF2 ggplot2 png]; }; - piecewiseSEM = derive2 { name="piecewiseSEM"; version="2.0.1"; sha256="1pi0jii0yhmvy0rqlchlijrhvdqa07i4wzj4cdd25bbjnfy97ayc"; depends=[car lme4 MASS nlme pbkrtest]; }; + piecewiseSEM = derive2 { name="piecewiseSEM"; version="2.0.2"; sha256="07vz90cghkbmcar9ps94wydvg4r7mj32pa7vjdmgm5j8dhxq8max"; depends=[car lme4 MASS nlme pbkrtest]; }; pifpaf = derive2 { name="pifpaf"; version="1.0.1"; sha256="0wj1fbhd871fnw7fjlbh0gdjz848mbwl1bzjp3cgmh9s7jnd2kci"; depends=[ggplot2 gridExtra MASS matrixcalc numDeriv sfsmisc]; }; - pillar = derive2 { name="pillar"; version="1.2.3"; sha256="1rzhssprqgam1nq3s0f5rzxhxsq02azcghvxf6k8kmsmddf1n7f8"; depends=[cli crayon rlang utf8]; }; + piggyback = derive2 { name="piggyback"; version="0.0.8"; sha256="1c17yjqpaj6r6spbhm901dilqpsa2s9jc029vdfmrxdk18fzaf1f"; depends=[clisymbols crayon fs gh git2r httr jsonlite lubridate magrittr memoise usethis]; }; + pillar = derive2 { name="pillar"; version="1.3.0"; sha256="1q6arybmfqxhp5zqj1fri5pb8v7ywcv7bmgf81rrmgl892p4bn5f"; depends=[cli crayon fansi rlang utf8]; }; pim = derive2 { name="pim"; version="2.0.1"; sha256="1m804clxc8m4nyzi4hhfy118527lgf2sb7589qd61fb83yh6hi8p"; depends=[BB nleqslv]; }; - pimeta = derive2 { name="pimeta"; version="1.0.1"; sha256="1l50k34xrnhfwwnwa7ym97blhqi84nkgcf9y5yg6hcg75ajgi6zl"; depends=[Rcpp RcppEigen]; }; - pinbasic = derive2 { name="pinbasic"; version="1.2.0"; sha256="1sn4q9g2pw8z6gyxi302bd7p578ldy1g6419w56z7jgv7m8n7g73"; depends=[fastcluster ggplot2 lubridate Rcpp reshape2 scales]; }; + pimeta = derive2 { name="pimeta"; version="1.1.1"; sha256="0ylna31x8491q6hppz827ngri0did0bfwy3nlifpagccb2m4psi3"; depends=[Rcpp RcppEigen]; }; + pinbasic = derive2 { name="pinbasic"; version="1.2.1"; sha256="0ciqqjhbhj1kvf4lkswqi5fc8m32lk2mwhyc96afvjvaig1xv5q8"; depends=[fastcluster ggplot2 lubridate Rcpp reshape2 scales]; }; pinfsc50 = derive2 { name="pinfsc50"; version="1.1.0"; sha256="1fja8xdqwsm4g223wmb2yg5fqmsg94hchzjd4qrqah1zb8vbdfdn"; depends=[]; }; + pingers = derive2 { name="pingers"; version="0.1.1"; sha256="09np6aph6rhvdh6mwky8a57i38bi2amwi7x91p9kfb2mzkql8k8w"; depends=[data_table dplyr lubridate plotly reshape2 stringr tibble tictoc tidyselect]; }; pingr = derive2 { name="pingr"; version="1.1.2"; sha256="17fh2gjlmwy6wy8i24q76fivjig8jm05g9kvfz81q0h6b5zxnpmg"; depends=[]; }; pinnacle_API = derive2 { name="pinnacle.API"; version="2.3.3"; sha256="1b6adns1xr3cgcj2mdjvl16cm2vjjgsj2l8m2c47plyc5jh05qmb"; depends=[data_table httr jsonlite magrittr openssl purrr rjson uuid]; }; pinnacle_data = derive2 { name="pinnacle.data"; version="0.1.4"; sha256="1sl36i2857b3xwx7iwgy8mkgjvz7nfa74ch1n8kcxbj59ib7mp8p"; depends=[tibble]; }; - pinp = derive2 { name="pinp"; version="0.0.5"; sha256="12wypniib0pacgd3lvk64r1xy01yangjk9k2b2pkj8il4ycvijk4"; depends=[knitr rmarkdown]; }; + pinp = derive2 { name="pinp"; version="0.0.6"; sha256="1424syaxq8p0ldqa0ybn0qyizs4r00xgkf6h5p7frhavy4rf8f2v"; depends=[knitr rmarkdown]; }; + pinyin = derive2 { name="pinyin"; version="1.1.4"; sha256="0qndd2mc95hbzkb0aqvmyhk2anwk7msd8xqy0rfiyrab94kxmgla"; depends=[data_table splitstackshape]; }; pipe_design = derive2 { name="pipe.design"; version="0.5.1"; sha256="0r0szkdzifxmnnbr6675w8ij4zwqgxj3gwahc7a74mxr51f7qh8j"; depends=[ggplot2 gtools xtable]; }; pipeGS = derive2 { name="pipeGS"; version="0.4"; sha256="0ki4i70r5f195b4jfv3hxlxz3zj57mhy2yf4984bwr11impilz5w"; depends=[]; }; pipeR = derive2 { name="pipeR"; version="0.6.1.3"; sha256="16lj227x24pviqb4dcrj7a55l31p5mm0cbwsb6m3y3n6k5wcd2nh"; depends=[]; }; @@ -9674,18 +10086,20 @@ in with self; { piton = derive2 { name="piton"; version="0.1.1"; sha256="1265y4lv2m5nwrh25sahjkxwmivpxgh9shrdidlmaman7zs6cclr"; depends=[Rcpp]; }; pivot = derive2 { name="pivot"; version="18.4.17"; sha256="0nhf76f2g35cx5f1m00wsy29n6xm2x5wajs5myaasks7hbkk0w3y"; depends=[assertthat colorspace DBI dbplyr dplyr lubridate magrittr purrr rlang tidyr tidyselect]; }; pivotaltrackR = derive2 { name="pivotaltrackR"; version="0.1.0"; sha256="024srncm288mn3bz6hv7ljzkchmnljk4yc2d4z7i05vsn7dzd2c6"; depends=[curl httr]; }; - pivottabler = derive2 { name="pivottabler"; version="0.4.0"; sha256="1q7gmfrqx3sn32q9rrr0y3hywq0fvm5gs5d3jj6mqcbs53jqvzqc"; depends=[data_table dplyr htmltools htmlwidgets jsonlite R6]; }; + pivottabler = derive2 { name="pivottabler"; version="1.0.0"; sha256="106q62bfnkmh328kdzshwz8v01pz2qiyxcgmfbn3rc0cd9ml6wyj"; depends=[data_table dplyr htmltools htmlwidgets jsonlite R6]; }; pixels = derive2 { name="pixels"; version="0.1.0"; sha256="0lna0z2shs49kh48ipjnyigaa22wb9gm4mq970ldhh9msb7wcv55"; depends=[htmlwidgets miniUI shiny]; }; - pixiedust = derive2 { name="pixiedust"; version="0.8.4"; sha256="0rq1q30x36p1135kv2s8nfshi8w73167dj14f4c5m3fczhljc7lr"; depends=[broom checkmate dplyr htmltools knitr labelVector magrittr scales tidyr]; }; + pixiedust = derive2 { name="pixiedust"; version="0.8.5"; sha256="1b3i2l6vzqbpycp9fw439k4jzdy19kvsjj4j6klfvdbkqf911hfw"; depends=[broom checkmate dplyr htmltools knitr labelVector magrittr scales tidyr]; }; pixmap = derive2 { name="pixmap"; version="0.4-11"; sha256="04klxp6jndw1bp6z40v20fbmdmdpfca2g0czmmmgbkark9s1183g"; depends=[]; }; pkgKitten = derive2 { name="pkgKitten"; version="0.1.4"; sha256="0c44zrvpyz87s5mjhsqdrkyrvyzhyldnq371bwnn9crbpbac3wnd"; depends=[]; }; - pkgbuild = derive2 { name="pkgbuild"; version="1.0.0"; sha256="10iz8057mixl9j73pq2cbp4ib6dadfsgi3fcsjjm7l3wwb9issd9"; depends=[callr crayon desc R6 rprojroot withr]; }; - pkgconfig = derive2 { name="pkgconfig"; version="2.0.1"; sha256="0h2sp93fqqjbfqgq82a3i94ybnndx6ghaal8pbf99firnsjb40mb"; depends=[]; }; + pkgbuild = derive2 { name="pkgbuild"; version="1.0.2"; sha256="1i1rrax7x7r2bplig5cfc50lx85jc4n9a3qmvbdviaj22wr2lghs"; depends=[callr cli crayon desc prettyunits R6 rprojroot withr]; }; + pkgconfig = derive2 { name="pkgconfig"; version="2.0.2"; sha256="1jk9ip549xphb3anfixqv1yx5kidnndqgy9v3qjpmgmds5a7g695"; depends=[]; }; pkgcopier = derive2 { name="pkgcopier"; version="0.0.1"; sha256="04vpjf8nvqnpry54f1wwrnmipd5m6gqd89c3vkryqx88jk85jd8s"; depends=[httr stringr]; }; pkgdown = derive2 { name="pkgdown"; version="1.1.0"; sha256="0w1f23d600j9s8sa5xq63j2p6pvch8nndcxc63s14szlfjlvmddd"; depends=[callr cli crayon desc devtools digest evaluate fs highlight httr magrittr MASS memoise purrr R6 rematch rlang rmarkdown roxygen2 rsconnect rstudioapi tibble whisker xml2 yaml]; }; pkggraph = derive2 { name="pkggraph"; version="0.2.2"; sha256="0pzqlim84b22ahq5yr50ybffqa0f5k5ch372v37nw1ndzci211d8"; depends=[curl data_table dplyr ggnetwork ggplot2 htmltools igraph intergraph Matrix network networkD3 plyr RColorBrewer tibble]; }; + pkgload = derive2 { name="pkgload"; version="1.0.1"; sha256="0mm0avvan528zbrcrxigl5fkd7za01fb0qhlqrqvm3ar0115cqa8"; depends=[desc pkgbuild rlang rprojroot rstudioapi withr]; }; pkgmaker = derive2 { name="pkgmaker"; version="0.27"; sha256="0spcamjncj78kzjps2rw4v1a4494yazv6xvhn0vmdflnypc8k8hp"; depends=[bibtex codetools digest magrittr registry stringi stringr withr xtable]; }; pkgnet = derive2 { name="pkgnet"; version="0.2.0"; sha256="0rbwpmkphsy51zncy2pv2cnf7v2dpk8gf8qwmbz4iyiq94kqri6f"; depends=[assertthat covr data_table DT futile_logger igraph knitr magrittr mvbutils R6 rmarkdown visNetwork]; }; + pkmon = derive2 { name="pkmon"; version="1.0"; sha256="0j2v4zlf7vgy5gld29xiii15m9i85cpiwc25rmzjm02cz2p32c72"; depends=[]; }; pkr = derive2 { name="pkr"; version="0.1.2"; sha256="0m045dlcq3rls1w0smy4jvk3c57ckpqdv8xnz261k1gnnyjmz1k2"; depends=[binr foreign forestplot rtf]; }; pks = derive2 { name="pks"; version="0.4-0"; sha256="0fx7p2d83x0ip65aqp9dga59d9cggam8k79mi0drk5birzchqbcr"; depends=[sets]; }; plRasch = derive2 { name="plRasch"; version="1.0"; sha256="1rnpvxw6pzl5f6zp4xl2wfndgvqz5l3kiv9sh4cpvhga0gl8zjaw"; depends=[survival]; }; @@ -9694,7 +10108,7 @@ in with self; { placement = derive2 { name="placement"; version="0.1.1"; sha256="1narjb90sb5prvzfv2x30bz8y9aq8hqggza91ghwi47m99vm1dg6"; depends=[base64enc digest jsonlite RCurl stringi urltools]; }; plan = derive2 { name="plan"; version="0.4-3"; sha256="0j3mvcy97r7adcs7q6z0w9ng74jcfwii1xp8kcl2cwbzs2fd425r"; depends=[]; }; planar = derive2 { name="planar"; version="1.6"; sha256="0x5xdb2afpc1w8s217hy765mz938kg5b5j7vzqzhlsh2dzdjccpj"; depends=[cubature dielectric ggplot2 plyr Rcpp RcppArmadillo reshape2 statmod]; }; - planor = derive2 { name="planor"; version="1.3-9"; sha256="0hivy4iqfw896d2zmcx5c3rmlfj8fkqg1qn2x8mdlial3dzm3mz6"; depends=[bit64 conf_design Rcpp RcppArmadillo]; }; + planor = derive2 { name="planor"; version="1.4-1"; sha256="1ci4wp18jjc8pjdn89vsz0nfdjif7fz6l5f6x6blqh9cz4hkkrlf"; depends=[bit64 conf_design Rcpp RcppArmadillo]; }; plantecophys = derive2 { name="plantecophys"; version="1.3-2"; sha256="1jj9rkhdmcnmp6fzbxmkfwmsdx2w7v923rv0xn5c5iv7wys7vwfm"; depends=[]; }; plaqr = derive2 { name="plaqr"; version="2.0"; sha256="15pdb57123m3cahvcsyrrvxjwxvs2f389yxip91gjxn68jf6cx1l"; depends=[quantreg]; }; plater = derive2 { name="plater"; version="1.0.1"; sha256="0v5b9r6iha18qvrjpbr1p8fy06nf31x63ch5cnb4axyqa0x5skpp"; depends=[dplyr]; }; @@ -9704,7 +10118,7 @@ in with self; { pleiades = derive2 { name="pleiades"; version="0.2.0"; sha256="1h3q4yf0w0al7n8l7ca4vgx2bhrrz8clli15svlds7n402s8rzp5"; depends=[crul DBI dbplyr dplyr gistr jsonlite rappdirs RSQLite]; }; pleio = derive2 { name="pleio"; version="1.5"; sha256="1y9nkv5bzfkzbl373405v3xq54nz37wjz9zkxfzl8ggr5i9lcbqy"; depends=[Matrix rms]; }; plfMA = derive2 { name="plfMA"; version="1.0.4"; sha256="0q6wiiknmgw812kcf9qq309zlizyry7ldn6m08lkw6xq6i4f4s85"; depends=[cairoDevice gWidgets gWidgetsRGtk2 limma RGtk2]; }; - plfm = derive2 { name="plfm"; version="2.2.1"; sha256="00x6yyr32rhh6696z5aazj98nyd01i26ij9hs2sxf6j677fmppdr"; depends=[abind sfsmisc]; }; + plfm = derive2 { name="plfm"; version="2.2.2"; sha256="1jgf3jrkdpsf77i4lf68s6sxax95c9is4nryhnzanq9i5f23j24v"; depends=[abind sfsmisc]; }; plgp = derive2 { name="plgp"; version="1.1-7"; sha256="02g6saabrsd8pra0szbwcbilf6w5ywg2gxqb5zdvbxds2vw36hn0"; depends=[mvtnorm tgp]; }; plink = derive2 { name="plink"; version="1.5-1"; sha256="0rn2i9i8af9aq0xgxhpcdchs2952lq2d2sg8x3js0zi3vcml76k0"; depends=[lattice MASS statmod]; }; plm = derive2 { name="plm"; version="1.6-6"; sha256="1a14a8zbqzm2a6z44haa0c23ax9j1jk72dhrkca8q0abbd5lkx85"; depends=[bdsmatrix Formula lattice lmtest MASS maxLik nlme sandwich zoo]; }; @@ -9721,22 +10135,23 @@ in with self; { plotSEMM = derive2 { name="plotSEMM"; version="2.4"; sha256="0fircrayhz92zvkigkyb1zpn07bvssqs1ip15p926zj3rl77fqgy"; depends=[MplusAutomation plotrix plyr Rcpp shiny]; }; plotfunctions = derive2 { name="plotfunctions"; version="1.3"; sha256="0cnmwkfjg45187j490sf01gxijhajrpi6j13hfckli2ysn6xrgz3"; depends=[]; }; plotluck = derive2 { name="plotluck"; version="1.1.0"; sha256="0arbvldg50lyn98vkrys1yjkkraz8jracwal4r2mlw991pnaikpp"; depends=[ggplot2 hexbin Hmisc plyr quantreg RColorBrewer scales]; }; - plotly = derive2 { name="plotly"; version="4.7.1"; sha256="0wj9lw7w28z8w9ip9vadv6sydjhqyg65kfiai9m3bndzz50b1m3w"; depends=[base64enc crosstalk data_table digest dplyr ggplot2 hexbin htmltools htmlwidgets httr jsonlite lazyeval magrittr purrr RColorBrewer scales tibble tidyr viridisLite]; }; + plotly = derive2 { name="plotly"; version="4.8.0"; sha256="19p8pa03q9mw5vaan7r56xgd13d90ssiz0flbrkvpfrir2105ybq"; depends=[base64enc crosstalk data_table digest dplyr ggplot2 hexbin htmltools htmlwidgets httr jsonlite lazyeval magrittr promises purrr RColorBrewer rlang scales tibble tidyr viridisLite]; }; plotlyGeoAssets = derive2 { name="plotlyGeoAssets"; version="0.0.1"; sha256="0if4cahihxm0b2k3r0w6qj91mwwsjy5zm289zk6myg65i7ijqly4"; depends=[]; }; - plotmo = derive2 { name="plotmo"; version="3.4.2"; sha256="19g3b0pjxzv1nd65q0aimgw16xyq451l8bgyfhvwxm30c4qyafd5"; depends=[plotrix TeachingDemos]; }; + plotmo = derive2 { name="plotmo"; version="3.5.0"; sha256="14v703ky45sw34iwbqna7f8hylzbnlqm2gnml7avdp2i8ycli8wb"; depends=[plotrix TeachingDemos]; }; plotpc = derive2 { name="plotpc"; version="1.0.4"; sha256="1sf7n7mfyaijldm24bc8r8pfm8pp9cyaja7am14z2wpj2j9f9vyq"; depends=[]; }; plotprotein = derive2 { name="plotprotein"; version="1.0"; sha256="14kfb4xxpfp8klz31kb7cpc39636ax2cx2483vqqkciccb28f0ks"; depends=[ade4 plotrix plyr seqinr XML]; }; - plotrix = derive2 { name="plotrix"; version="3.7-2"; sha256="0hx3xv94gzlyy7ny5k4mzs7w1798h1zka175m5bkzc524493cm88"; depends=[]; }; + plotrix = derive2 { name="plotrix"; version="3.7-4"; sha256="1hs0zwaqs34559girinvysjfbvznyn8znp9cwvkqx6k2cqvcjinj"; depends=[]; }; plotrr = derive2 { name="plotrr"; version="1.0.0"; sha256="07ilqpa3ypqb2gpnq23r9v4kkfxz06mcak9si9adr9sf6c7gqwxz"; depends=[dplyr ggplot2]; }; + plotscale = derive2 { name="plotscale"; version="0.1.6"; sha256="0h2g0rv1lh70nqmqydgg5swwnwmy08wbjajxyb1c2a716rad765j"; depends=[]; }; plotwidgets = derive2 { name="plotwidgets"; version="0.4"; sha256="1w7c9grw4pyyra230196yq32snr4wdg6xi8vh4dx5df2v500wz22"; depends=[]; }; - pls = derive2 { name="pls"; version="2.6-0"; sha256="15j59p5x0rkdrk7iqzkipsy50rsyjl31w8zxc4w3v1j5gzxhi1rx"; depends=[]; }; - plsRbeta = derive2 { name="plsRbeta"; version="0.2.2"; sha256="1ia3hngpzaav3gfcxajb1fxa2ljgbwd5xkrahc2bxi7wfdidngs5"; depends=[betareg boot Formula MASS mvtnorm plsdof plsRglm]; }; - plsRcox = derive2 { name="plsRcox"; version="1.7.3"; sha256="17x79ihl9xpahva9ibbipyp1z9crvwm3y5g7ynxfjq7rjxwvw13y"; depends=[kernlab lars mixOmics pls plsRglm risksetROC rms survAUC survcomp survival]; }; + pls = derive2 { name="pls"; version="2.7-0"; sha256="0xaqqgmdvfh7g7v1m4bcwjqzph68b9cq3bn4kjisfsadl54i5p2x"; depends=[]; }; + plsRbeta = derive2 { name="plsRbeta"; version="0.2.3"; sha256="0yk2pirgszpdf33zk9ijh776aw4f238sjmga3w06xbvwf8q2vw8j"; depends=[betareg boot Formula MASS mvtnorm plsdof plsRglm]; }; + plsRcox = derive2 { name="plsRcox"; version="1.7.3.1"; sha256="1ni1hx54qxk48nnypqd9j189vi4vph3lqg06r39mv7xa4ap8ypmv"; depends=[kernlab lars mixOmics pls plsRglm risksetROC rms survAUC survcomp survival]; }; plsRglm = derive2 { name="plsRglm"; version="1.2.3"; sha256="0qf3nh3nw6psqr12zw9r5vagrlpwav3xiv3rh7xra13zx821kr4g"; depends=[bipartite boot car mvtnorm]; }; plsVarSel = derive2 { name="plsVarSel"; version="0.9.4"; sha256="19xz7ds4jx5ql999mwn9zs983rlshf14y4nlah8cfy9gpi0vl1g1"; depends=[bdsmatrix genalg MASS mvtnorm pls progress]; }; plsdepot = derive2 { name="plsdepot"; version="0.1.17"; sha256="1i00wxr451xpfy6dnvcm11aqf9106jsh5hj7gpds22ysgm4iq5w4"; depends=[]; }; - plsdof = derive2 { name="plsdof"; version="0.2-7"; sha256="1z8z9m0nsnyy1fipzvm1srpxn3q6wjrlivmmki1f8plwkixkyc5y"; depends=[MASS]; }; - plsgenomics = derive2 { name="plsgenomics"; version="1.5-1"; sha256="0d2k3h2cwwhcv7mbxqypd7g6yp1l6j32n3wslm348zmcx50j9pn4"; depends=[boot fields MASS plyr reshape2 RhpcBLASctl]; }; + plsdof = derive2 { name="plsdof"; version="0.2-8"; sha256="00phvvb17s0y2f0xqwak7lp7bdx9lws3m5n5mbd9l8514pfdxcxc"; depends=[MASS]; }; + plsgenomics = derive2 { name="plsgenomics"; version="1.5-2"; sha256="1pvb50nv6jc99bm2hsxpzazg26y49yi24wwwim5xcjj6j1szbip4"; depends=[boot fields MASS plyr reshape2 RhpcBLASctl]; }; plspm = derive2 { name="plspm"; version="0.4.9"; sha256="03aj1ffq11hh931dbkxy9ba74xyvzmr1ylrj4fw1rbryrwqg89v6"; depends=[amap diagram shape tester turner]; }; plspm_formula = derive2 { name="plspm.formula"; version="1.0.1"; sha256="1i2d1q8pz21js1ci8afnqzcky430hh1iwf5f6jr3j9yr9gs365k5"; depends=[plspm]; }; plspolychaos = derive2 { name="plspolychaos"; version="1.1-1"; sha256="078arfv8z5nfrmsfi0n7hskmv394ysi6nhlskpy5cg37lqiwh0r1"; depends=[lhs MASS]; }; @@ -9747,13 +10162,14 @@ in with self; { plus = derive2 { name="plus"; version="1.0"; sha256="1l7lvnq7vahj8m7knmr4q3wj00ar7iq89j45a2dqn2bh0qyj68ls"; depends=[]; }; plusser = derive2 { name="plusser"; version="0.4-0"; sha256="1g100dh8cvn9q09j0jbkw4xmwjdp1lm4651369975fm99nrlp1j9"; depends=[lubridate plyr RCurl RJSONIO]; }; plyr = derive2 { name="plyr"; version="1.8.4"; sha256="1igar5pcjqh0jyxv0z3jah8rz617vfa86vw0r5c7c031b7bj5db0"; depends=[Rcpp]; }; - pmatch = derive2 { name="pmatch"; version="0.1.3"; sha256="1k83ysgc4dwms0k5knh2rj99l3kfclw9a29h2ksphy0g4r1ig9k3"; depends=[dplyr glue purrr rlang tibble]; }; + pmatch = derive2 { name="pmatch"; version="0.1.4"; sha256="1d04q3kh46pha4yn5xy6ax7qkw9bwrxfkh5x6y4nwsby5j3xw2c0"; depends=[dplyr foolbox glue magrittr purrr rlang tibble]; }; pmc = derive2 { name="pmc"; version="1.0.3"; sha256="06bsab09i9ydgsjx5i50kdb22ldp4g1v83a01kz3mswybi4lv9w2"; depends=[dplyr geiger ggplot2 ouch tidyr]; }; pmcgd = derive2 { name="pmcgd"; version="1.1"; sha256="1pybzvyjmzpcnxrjsas06diy3x83i1r5491s6ccyr63l56hs55d5"; depends=[mixture mnormt]; }; pmclust = derive2 { name="pmclust"; version="0.2-0"; sha256="1bpfix76ylmn5ds6y0v40mfad7znaa6dj5ngr4mzv96yy6mg13ns"; depends=[MASS pbdBASE pbdDMAT pbdMPI]; }; - pmhtutorial = derive2 { name="pmhtutorial"; version="1.2"; sha256="1dviqazdk3ggxwwyv20409w3qadka0gbcgviwyywssn2x4cg0vih"; depends=[mvtnorm Quandl]; }; - pmml = derive2 { name="pmml"; version="1.5.4"; sha256="1acld1x0z5rgyxb5id071s3zvf2vbv4b9nngvxrb63ay3yyy124b"; depends=[stringr XML]; }; - pmmlTransformations = derive2 { name="pmmlTransformations"; version="1.3.1"; sha256="1cxmp3fgsf3z71v6qpd9l9ilgda5knan7vqifxpgm8m7a30sp3f3"; depends=[]; }; + pmhtutorial = derive2 { name="pmhtutorial"; version="1.3"; sha256="1acrqjannyhg608g8ap3hj2r6krl0js44q8gsyk7lw0s0xr1k67v"; depends=[mvtnorm Quandl]; }; + pmml = derive2 { name="pmml"; version="1.5.6"; sha256="0w12gnjf7l59qws9cn87ay5xglixbpiir53ms6y4r0y3vn7xb8yn"; depends=[stringr XML]; }; + pmmlTransformations = derive2 { name="pmmlTransformations"; version="1.3.2"; sha256="1s222r0zj630gjsvi28wb5mbz9fky967m9jnpaj8nsqv3k9sgkcc"; depends=[]; }; + pmpp = derive2 { name="pmpp"; version="0.1.0"; sha256="1vmv7aav0rvp7kd5f16ym422ygw1wpnwrhmmp2w1c2fl8i263zh9"; depends=[data_table dplyr ggplot2 magrittr MASS Matrix minqa moments plm pracma]; }; pmr = derive2 { name="pmr"; version="1.2.5"; sha256="0dq97dfjmgxlhr3a2n20vyyzfmamcicw878hdxpw31lw02xs6yls"; depends=[]; }; pmultinom = derive2 { name="pmultinom"; version="1.0.0"; sha256="0p2amb3y4jl24r21fii1qpmdbn5pfgywrx8k7x1jxpg49rk7k0rp"; depends=[fftw]; }; pmxTools = derive2 { name="pmxTools"; version="0.1.0"; sha256="1a242c85ywk026vb778s8bjc331ww11rb15pai02wbvpw9x4kpa0"; depends=[GGally ggplot2 magrittr MASS PKNCA plyr stringr XML xpose]; }; @@ -9769,40 +10185,45 @@ in with self; { pointdensityP = derive2 { name="pointdensityP"; version="0.3.4"; sha256="0vv8j1yz8n2vmmp6bg2i8w3dchdbybsdxn3sk5d1ync2knih8l2s"; depends=[data_table]; }; poio = derive2 { name="poio"; version="0.0-3"; sha256="1smbnqjlicaqq2hswl910yiirzb9zikbk4pqxm9pwpixywj0nkys"; depends=[assertive_base assertive_files assertive_properties assertive_sets assertive_strings assertive_types devtools digest dplyr magrittr R6 stringi tibble whoami]; }; poisDoubleSamp = derive2 { name="poisDoubleSamp"; version="1.1"; sha256="13wyj9jf161218y4zjv2haavlmanihp9l59cvh7x8pfr9dh2dwr8"; depends=[Rcpp]; }; + poisFErobust = derive2 { name="poisFErobust"; version="1.0.1"; sha256="0qgwl5gb2rw043zb0h1rrv038ymsd72r8h9gqdr2xkfbi3mnr24r"; depends=[data_table glmmML]; }; poisbinom = derive2 { name="poisbinom"; version="1.0.1"; sha256="0mjxg0s3nck7qrmq4bbrhwxfwr6fqml54s9k8q1mkfzlifa7qyf7"; depends=[Rcpp]; }; poisson = derive2 { name="poisson"; version="1.0"; sha256="1diyf1b84sr6iai3ghd3kcp6fc6w7fan49wzs1lzvxxsmp15ag2d"; depends=[]; }; poisson_glm_mix = derive2 { name="poisson.glm.mix"; version="1.2"; sha256="0328m279jfa1fasi9ha304k4wcybzr7hldww7wn0cl7anfxykbv8"; depends=[]; }; + poissonMT = derive2 { name="poissonMT"; version="0.3-5"; sha256="14qkc8qz3423b13gp6gsp8cbb1nv9wwjjfa4i9zc15qy5i99ha26"; depends=[checkmate MASS robcbi robustbase]; }; poistweedie = derive2 { name="poistweedie"; version="1.0"; sha256="18992fafypds3qsb52c09fasm3hzlyh5zya6cw32wnhipmda643m"; depends=[]; }; poker = derive2 { name="poker"; version="0.8.8"; sha256="14ik77440z22k4kwq0p1fn7adzi0p8mh8j8hd7ayinvrab4b5r85"; depends=[]; }; polidata = derive2 { name="polidata"; version="0.1.0"; sha256="07641v0dnn161kyxx7viplkf8c3r51hd4hd5pzmcph4y4387r01i"; depends=[jsonlite RCurl]; }; - poliscidata = derive2 { name="poliscidata"; version="1.2.0"; sha256="0vn9wdlh3bi24mcq0r4ani2b0hhlg1za1z6fw8ikz7952gpacqk8"; depends=[abind car descr ENmisc gplots Hmisc plotrix plyr survey weights xtable]; }; - politeness = derive2 { name="politeness"; version="0.2.4"; sha256="0r8wsghznbkdl3nn1rh7wi3l9zggdrvi2yjish7inkd8ygs4p8x1"; depends=[data_table ggplot2 glmnet quanteda spacyr stringr textir tm]; }; - pollen = derive2 { name="pollen"; version="0.70.0"; sha256="1hk9sjxzwglj98ryic3m80lajzv1klnq9dl6i97c8f0ihbf97zdq"; depends=[dplyr lubridate purrr]; }; + poliscidata = derive2 { name="poliscidata"; version="2.2.3"; sha256="18mmdzf9hrfz36rh1rg1j5q1m131xadppy272y4f4yay0ljafbm2"; depends=[abind car descr ENmisc gplots Hmisc plotrix plyr survey weights xtable]; }; + politeness = derive2 { name="politeness"; version="0.2.5"; sha256="01lj7zxcijlibzjjvh70xq0qmjf8habqslxwj34h2chvffkakngg"; depends=[data_table ggplot2 glmnet quanteda spacyr stringr textir tm]; }; + pollen = derive2 { name="pollen"; version="0.71.0"; sha256="0g0g6n8y87jyk7l4s6xpdk60dz4lkg2xp5c5agakkrah8a233920"; depends=[dplyr lubridate purrr]; }; + pollimetry = derive2 { name="pollimetry"; version="1.0.0"; sha256="11a1ksbf9mgdp0yn823kiwka7vi5d93ivv7zsmhvjinmh3pxn1zb"; depends=[brms repmis]; }; pollstR = derive2 { name="pollstR"; version="2.0.1"; sha256="13g5z1hix1bmsxznq5qx82yf445rvvyn67ch9bihxm1hr4cr4sbl"; depends=[httr lubridate purrr stringr]; }; - polmineR = derive2 { name="polmineR"; version="0.7.8"; sha256="18dg0p74drc9awgiwsy3wkdc3z350kvsdsjhnm35047kqg67v2bc"; depends=[data_table DT jsonlite Matrix pbapply R6 RcppCWB slam stringi tm xml2]; }; + polmineR = derive2 { name="polmineR"; version="0.7.10"; sha256="0ynb9gpphwm1inyagxj5kfn15jbl0paydfy6hcjm4912ncf5bvri"; depends=[data_table DT jsonlite knitr Matrix pbapply R6 RcppCWB slam stringi tm xml2]; }; polspline = derive2 { name="polspline"; version="1.1.13"; sha256="08hz6wlaipjss3cfk0dvr7yy6fc7cd4hqv9finj40kkm5n262xck"; depends=[]; }; - polyCub = derive2 { name="polyCub"; version="0.6.1"; sha256="16nr83gmv6pnk89nqxh8ihzacb0y8l4lz05c8sp6whmr26ja9vnf"; depends=[sp]; }; - polyPK = derive2 { name="polyPK"; version="3.0.0"; sha256="1vdfsad2b9habvm2ikjgn7ihnm851q9lqmgqjlsl737ka1vsgisf"; depends=[circlize corrplot gplots Hmisc impute imputeLCMD mixOmics pcaMethods pkr plyr ropls samr sqldf xlsx]; }; + polyCub = derive2 { name="polyCub"; version="0.7.0"; sha256="0cigzpdas6alr3fc6w7dhn2pf4n5qc1jmvdjlqw4mvpajn034hid"; depends=[sp]; }; + polyPK = derive2 { name="polyPK"; version="3.1.0"; sha256="0cb83sq8iz4swr73vwhh8n4k62p6321nsy1sz5fba0wiicycxf55"; depends=[circlize corrplot gplots Hmisc impute imputeLCMD mixOmics pcaMethods pkr plyr ropls sqldf xlsx]; }; + polyRAD = derive2 { name="polyRAD"; version="0.5-0"; sha256="1g3s12x6m6v3mqz82xssyxh0kzjq2kx6p1bw2z5px06px4d8m7dx"; depends=[fastmatch pcaMethods Rcpp]; }; polySegratio = derive2 { name="polySegratio"; version="0.2-5"; sha256="0djw49mbhd7x6jr0f5qkb9akw3fw3ax4w9xv8iwa5f65q5gbxpdf"; depends=[gdata]; }; polySegratioMM = derive2 { name="polySegratioMM"; version="0.6-4"; sha256="162xj52566kaxgfk7c14170xx07isyjmqb9skvhrdg7sz20lc3l1"; depends=[coda gtools lattice polySegratio]; }; polyaAeppli = derive2 { name="polyaAeppli"; version="2.0"; sha256="0kyz3ap92xz7aqyviyrpggfmicy1gybrx7y19djsmixcwz53zqch"; depends=[]; }; polyapost = derive2 { name="polyapost"; version="1.5"; sha256="0r2h51l2y0sj0xahdzfy1lyq4kh166crh2j02sk85q577q9d883y"; depends=[boot rcdd]; }; polychaosbasics = derive2 { name="polychaosbasics"; version="1.1-1"; sha256="1kw5c4dmgpkbk2a30hh5n6xqpnbh6q2swxsdjkmcmhkwrzm4ylm2"; depends=[lhs MASS]; }; - polyclip = derive2 { name="polyclip"; version="1.9-0"; sha256="0c4xf5m1amig0glnq3nczrl3fww0g57xwkgb6qnkyc7l7chin9ac"; depends=[]; }; + polyclip = derive2 { name="polyclip"; version="1.9-1"; sha256="0r5izja3ns39as40al04vl4jz17d6cgbsb4sj16c9z9l3fzpimf5"; depends=[]; }; polycor = derive2 { name="polycor"; version="0.7-9"; sha256="0d0756faksviic5jrc47fg6l3wsm9r2wlbnxiw08563rv7shbvb7"; depends=[Matrix mvtnorm]; }; polyfreqs = derive2 { name="polyfreqs"; version="1.0.2"; sha256="13859vbpys5yj1qiapyzv9wlvi6x6k0rm335bsi1v07ch3x2bh3b"; depends=[Rcpp]; }; polyglot = derive2 { name="polyglot"; version="0.1.2"; sha256="01sb3ilr58252yw0b2669vjdf8574br0n2n0ffwd86gc9f3islb3"; depends=[]; }; - polymapR = derive2 { name="polymapR"; version="1.0.16"; sha256="0j9zsgm4v78scsl4bblrf2rs691296p1sdimqqzs03d56cgaky04"; depends=[combinat doParallel foreach igraph knitr MDSMap]; }; + polymapR = derive2 { name="polymapR"; version="1.0.17"; sha256="148mnkarrc9k15vy82f2wma6was8p41hg7wlv2kc50sn30v5gkwa"; depends=[combinat doParallel foreach igraph knitr MDSMap]; }; polynom = derive2 { name="polynom"; version="1.3-9"; sha256="1s4xxv5rvpigawknvq27v9vzvs83phfsj5h8mim2lmf5bj950nnk"; depends=[]; }; polypoly = derive2 { name="polypoly"; version="0.0.2"; sha256="00c1hrnf575awvh0rlsnf6nkgi9p3fnqhd1knamkgb4icwi5s46d"; depends=[ggplot2 reshape2 rlang tibble]; }; polysat = derive2 { name="polysat"; version="1.7-3"; sha256="155zcrjvpnqdzakmxqds17wmn5kl4rrkv9bqlxq8hrrly3nf6ynz"; depends=[Rcpp]; }; polywog = derive2 { name="polywog"; version="0.4-1"; sha256="02qk1cyvkd77mwlvhj1zzzi0bmy7qxz29j2v730wp7rz4w7h5x5n"; depends=[foreach Formula glmnet iterators Matrix miscTools ncvreg Rcpp stringr]; }; pom = derive2 { name="pom"; version="1.1"; sha256="02jv19apn0kmp1ric2cxajlaad2fmsz4nm4izd2c3691vzas7l83"; depends=[matrixcalc]; }; - pomp = derive2 { name="pomp"; version="1.17"; sha256="0f7706hgpa70b5l1p34yq57fqyk4w55z8d5rvsv03m2cxilngc9k"; depends=[coda deSolve digest mvtnorm nloptr subplex]; }; - pompom = derive2 { name="pompom"; version="0.1.4"; sha256="0j37gq6lfccypclhrp7w3yfgsjbhfgqwg7x87r6rgywz6b3fnsgh"; depends=[ggplot2 lavaan qgraph reshape2]; }; + pomp = derive2 { name="pomp"; version="1.18"; sha256="0x77vx09ps4p1ihcd6yb4halr8jsq67d8zc04hp6vqkk0s7ycvyx"; depends=[coda deSolve digest mvtnorm nloptr subplex]; }; + pompom = derive2 { name="pompom"; version="0.2.0"; sha256="1alz3lrj7m16vhymsvvrcmf0kmgx88q2f3v4j6wiciqv77bnyai1"; depends=[ggplot2 lavaan qgraph reshape2]; }; pooh = derive2 { name="pooh"; version="0.3-2"; sha256="0qwa5j91aypasvsf4xcfbl6lz7llawdr38jiflzmfak2ad72rv7j"; depends=[]; }; pool = derive2 { name="pool"; version="0.1.4.1"; sha256="1a8kyfwylr8gl2z2w2fmf6657yqvw0ylf1pxg00flddf8fnwbh0w"; depends=[DBI dbplyr dplyr later R6]; }; - poolfstat = derive2 { name="poolfstat"; version="0.0.1"; sha256="1g6qx4518cr77wdlbicda68jm2yji24h14mjv5sq7zq241h4ailh"; depends=[]; }; + poolVIM = derive2 { name="poolVIM"; version="1.0.0"; sha256="19yw6pp5l3jmla4wjbvpjq132f645yks49pzsdv123f3qfr8f0m6"; depends=[EmpiricalBrownsMethod Hmisc ranger]; }; + poolfstat = derive2 { name="poolfstat"; version="1.0.0"; sha256="15s9zs13x9w5lxxibkpg40sg2hgaqfx1gbcpdq4yb0zpjpjlg9x1"; depends=[]; }; pooling = derive2 { name="pooling"; version="1.1.1"; sha256="0011w80pxz01scj2sa69m1bcfq797hq3ihpw46fdlxsxavz8prwy"; depends=[cubature dplyr dvmisc ggplot2 ggrepel mvtnorm pracma]; }; pop = derive2 { name="pop"; version="0.1"; sha256="0hbxdrkasb69x7ipddvyrzl5vvc7dd6rzj1vy7v3chg3rzgq89cj"; depends=[igraph MASS]; }; pop_wolf = derive2 { name="pop.wolf"; version="0.1"; sha256="19n00xv47v9j7slvm2ykzlksjfwjzimf88b3nk0y0192c29sdc9x"; depends=[abind]; }; @@ -9814,18 +10235,22 @@ in with self; { popdemo = derive2 { name="popdemo"; version="1.3-0"; sha256="0760ajqaq822m0j092gdqzhgw1mk413k09mmmwyzb0jzj6bd15q3"; depends=[expm MCMCpack]; }; popkin = derive2 { name="popkin"; version="1.0.5"; sha256="147ic0d7cgs4x9vz4jm4wd6ckikn0s8a0q1mknmcrcfisq8zim75"; depends=[RColorBrewer Rcpp RcppEigen]; }; poplite = derive2 { name="poplite"; version="0.99.19"; sha256="0y1l21clp9b5m50chqnqmvyd6rsk6xgn2bqf1877gx3h1qidh5fm"; depends=[DBI dbplyr dplyr igraph lazyeval RSQLite]; }; - poppr = derive2 { name="poppr"; version="2.8.0"; sha256="132lfxcdqxhh3f09sdgwas4372yrqcflws936fqyp0isg59siyzx"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas phangorn polysat rlang shiny vegan]; }; + poppr = derive2 { name="poppr"; version="2.8.1"; sha256="1pl6lqbcrqrzz28cs70ki8bp749af4b8a9dk1bcdwg290vxzqywp"; depends=[ade4 adegenet ape boot dplyr ggplot2 igraph magrittr pegas phangorn polysat rlang shiny vegan]; }; popprxl = derive2 { name="popprxl"; version="0.1.4"; sha256="076aia4qbq5yw2nxafq2ys5n5c7wv77i8k1nmzb3all193vjf203"; depends=[poppr readxl]; }; popsom = derive2 { name="popsom"; version="4.2"; sha256="11d6z3qsq94k0557pnwa0h4pc718360lvg9jkblp8abnj52lcvvv"; depends=[class fields ggplot2 som]; }; poptrend = derive2 { name="poptrend"; version="0.1.0"; sha256="0hypxpb18azg6q1mqrphbx3x262h9ybwhlkb8fyd6vr7jjb5wn3h"; depends=[mgcv]; }; population = derive2 { name="population"; version="0.2"; sha256="1k0hwh17dyfbbyw8gprsz1klx6l2ncq5mxkmnjmknlnrkpah0bbl"; depends=[abind]; }; - populationPDXdesign = derive2 { name="populationPDXdesign"; version="1.0.2"; sha256="00xfpfd1ly2cv82x5r9sy1h7gq2yhhw2gz0sw3z1cpk9vxzvr6d9"; depends=[devtools ggplot2 plyr roxygen2 shiny shinycssloaders]; }; - portes = derive2 { name="portes"; version="2.1-4"; sha256="09liy2bia76h5dh21s8skq9pj8k4wpq5agwrmr1pnvlpgc8m2b60"; depends=[]; }; + populationPDXdesign = derive2 { name="populationPDXdesign"; version="1.0.3"; sha256="0p73ddv3j1s1vs4j3axnsf39n626qjv0w1qlq9p7km4s6729bhgv"; depends=[devtools ggplot2 plyr roxygen2 shiny shinycssloaders]; }; + portes = derive2 { name="portes"; version="3.0"; sha256="144fipskh6yb6xcz3m5bgh2kwjwa58zaw24y88hzzrdvh9glvyrc"; depends=[forecast]; }; portfolio = derive2 { name="portfolio"; version="0.4-7"; sha256="0gs1a4qh68xsvl7yi6mz67lamwlqyqjbljpyax795piv46kkm06p"; depends=[lattice nlme]; }; + portfolio_optimization = derive2 { name="portfolio.optimization"; version="1.0-0"; sha256="1rdhwffsjc1pa1qq7rqy6dwk8yrcblkmijz94p2w7sf2v4jmwxxr"; depends=[magrittr MASS modopt_matlab xts]; }; portfolioSim = derive2 { name="portfolioSim"; version="0.2-7"; sha256="1vf46882ys06ia6gfiibxx1b1g81xrg0zzman9hvsj4iky3pwbar"; depends=[lattice portfolio]; }; + portsort = derive2 { name="portsort"; version="0.1.0"; sha256="0swl39dn7lzwvps18bva4l64a441gkf6lbwcwrhlf93f1ardvxji"; depends=[xts zoo]; }; postGIStools = derive2 { name="postGIStools"; version="0.2.2"; sha256="1d1igv17bj17d0nmavvn5814nqb7k0hs2cjbaqgjd6ip1wcclfxz"; depends=[DBI jsonlite rgdal rgeos RPostgreSQL sp stringr]; }; + postal = derive2 { name="postal"; version="0.1.0"; sha256="1cg9fyiraawxmmfm15lzxwv7pqizjbyrr5aqm8aqrg928ynjy3q9"; depends=[curl dplyr glue janitor jsonlite lubridate magrittr purrr readr stringr tibble tidyr]; }; postlightmercury = derive2 { name="postlightmercury"; version="1.2"; sha256="1345ckp50jplcdqp3a250c6mhapqh9322jzpxj5dyqmbg2nmgp9i"; depends=[crul jsonlite purrr rvest tibble xml2]; }; potts = derive2 { name="potts"; version="0.5-7"; sha256="194996wr4rnpr42xqfi5yrcnxvd82all2fxki95dklr2qfjxg98a"; depends=[]; }; + powdR = derive2 { name="powdR"; version="0.1.0"; sha256="0a2n33x16920v3z909hcnkdi6hp2id3j89svn2qp9g57f9md0hi1"; depends=[ggplot2 ggpubr plotly reshape shiny]; }; powdist = derive2 { name="powdist"; version="0.1.4"; sha256="1my88ag5q9hwkn2wy79jl9008gpvg0bsrnyc81gkdfi7pjh2mp1z"; depends=[gamlss_dist normalp rmutil]; }; poweRlaw = derive2 { name="poweRlaw"; version="0.70.1"; sha256="04sr0nhdd1v915m0zf5gasznzgi08ykcy20kkwdw0l5mvvdbic8m"; depends=[VGAM]; }; powell = derive2 { name="powell"; version="1.0-0"; sha256="160i4ki3ymvq08szaxshqlz7w063493j5zqvnw6cgjmxs7y0vj8y"; depends=[]; }; @@ -9836,39 +10261,39 @@ in with self; { powerMediation = derive2 { name="powerMediation"; version="0.2.9"; sha256="1rk8h8qn4b68ra5h5hiy9fvvbpskj9y806rwrvl1l7gs7xlmji7l"; depends=[]; }; powerSurvEpi = derive2 { name="powerSurvEpi"; version="0.1.0"; sha256="1xxicvw113mc2y889rklws3xml5z64sgjpn4wg95gbw6nadch7zz"; depends=[survival]; }; powerbydesign = derive2 { name="powerbydesign"; version="1.0.4"; sha256="0xd4hylx7jl4ksycz5gfjcgy92mh5c9d4r34ap1g81ybmyk7yrsj"; depends=[gdata ggplot2 lme4 MASS plyr reshape2 stringr]; }; - powerlmm = derive2 { name="powerlmm"; version="0.3.0"; sha256="1prg1dw0pzyz4vc7a936bgx56227ab34b3ipwxn1mm8n03xk1zqc"; depends=[lme4 MASS Matrix scales]; }; + powerlmm = derive2 { name="powerlmm"; version="0.4.0"; sha256="0dpfvbp54lhz7ibzihqqrbl45s6dqxn6qyvv39mk2166hjcgi1h2"; depends=[lme4 MASS Matrix scales]; }; powerpkg = derive2 { name="powerpkg"; version="1.5"; sha256="0mbk2fda2fvyp1h5lk5b1fg398xybbjv0z6kdx7w7xj345misf7l"; depends=[]; }; powerplus = derive2 { name="powerplus"; version="3.1"; sha256="0ayp6x34hkzgris4j3zbbs0r23n81bhww3wgfyy630ri4sk6brrn"; depends=[complexplus expm MASS Matrix phonTools]; }; ppcSpatial = derive2 { name="ppcSpatial"; version="0.2.0"; sha256="1gi57zngc42wcrihg29nn7qa3gaq105ckp76qmczkldshlpd7x4r"; depends=[dplyr ggplot2 htmltools htmlwidgets leaflet magrittr PakPC2017 rgdal scales shiny tidyr tmap]; }; ppcc = derive2 { name="ppcc"; version="1.0"; sha256="022c8w7ws7fw6yy572rn6m8ki14d2ph7nd2hk2c6mmx2c4lbc20v"; depends=[]; }; ppclust = derive2 { name="ppclust"; version="0.1.1"; sha256="10fcyayda634lg5g992g21casqx5k0jni9r30km5rczzib7cz9gg"; depends=[inaparc MASS]; }; ppcor = derive2 { name="ppcor"; version="1.1"; sha256="1x9b2kb8s0bp92b17gby0jwzzr3i4cf3ap9c4nq7m8fav72g0y3a"; depends=[MASS]; }; + ppgmmga = derive2 { name="ppgmmga"; version="1.0.1"; sha256="16pvpfx353wjn317d3gxfgv6g20prnzwyqrmk0n4pz646mxq9i19"; depends=[cli crayon GA ggplot2 ggthemes mclust Rcpp RcppArmadillo]; }; ppitables = derive2 { name="ppitables"; version="0.2.0"; sha256="097rrkgv1xvn00gcmv9mfy4qwx4f4wjaj4j0c2az6smkhnzyr37n"; depends=[tibble tidyr]; }; - ppls = derive2 { name="ppls"; version="1.6-1"; sha256="1r3h4pf79bkzpqdvyg33nwjabsqfv7r8a4ziq2zwx5vvm7mdy7pd"; depends=[MASS]; }; + ppls = derive2 { name="ppls"; version="1.6-1.1"; sha256="1zyrisy3c4cz896j1bjh61sf57wdl9p8ywdq268cl819szfq78mx"; depends=[MASS]; }; ppmlasso = derive2 { name="ppmlasso"; version="1.1"; sha256="1w13p1wjl1csds1xfc79m44rlym9id9gwnp3q0bzw05f35zbfryg"; depends=[spatstat]; }; pps = derive2 { name="pps"; version="0.94"; sha256="0sirxpagqc2ghc01zc6q4dk691six9wkgknfbwaqxbxvda3hcmyq"; depends=[]; }; ppsbm = derive2 { name="ppsbm"; version="0.2.2"; sha256="0y4whxv14jqx7mqxj7n427vpbxb5rkwj8xvx0mj4knnwy9v437z4"; depends=[clue gtools Rfast]; }; pqantimalarials = derive2 { name="pqantimalarials"; version="0.2"; sha256="0azxkf1rvk9cyzr4gbp4y2vcxrxw3d4f002d5gjkvv1f4kx8faw1"; depends=[plyr RColorBrewer reshape2 shiny]; }; prLogistic = derive2 { name="prLogistic"; version="1.2"; sha256="1abwz7nqkz2qbyqyr603kl9a3rkad3f4vxhck6a9kl80xrmfrj9s"; depends=[boot Hmisc lme4]; }; prabclus = derive2 { name="prabclus"; version="2.2-6"; sha256="0qjsxrx6yv338bxm4ki0w9h8hind1l98abdrz828588bwj02jya1"; depends=[MASS mclust]; }; - pracma = derive2 { name="pracma"; version="2.1.4"; sha256="1ygm81i7mqvh229dp9935djjyb120p3bqvaf4k572sa4q63fzjhc"; depends=[]; }; + pracma = derive2 { name="pracma"; version="2.1.8"; sha256="0m8ladhrfyxwybblkcdgg4xv1mk5kibmwarpj2k0c2y34zzcix4z"; depends=[]; }; pragma = derive2 { name="pragma"; version="0.1.3"; sha256="1n30a346pph4d8cj4p4qx2l6fnwhkxa8yxdisx47pix376ljpjfx"; depends=[]; }; - prais = derive2 { name="prais"; version="0.1.1"; sha256="0vv6h12gsbipi0gnq0w6xh6qvnvc0ydn341g1gnn3zc2n7cx8zcn"; depends=[]; }; + prais = derive2 { name="prais"; version="1.0.0"; sha256="176878dyfqfx9x2cd97c43qb0gn0rs04jn3268n9yksfsxmrr4wx"; depends=[]; }; praise = derive2 { name="praise"; version="1.0.0"; sha256="1gfyypnvmih97p2r0php9qa39grzqpsdbq5g0fdsbpq5zms5w0sw"; depends=[]; }; praktikum = derive2 { name="praktikum"; version="0.1"; sha256="0kkydgglvqw371fxh46fi86fmdndhwq1n8qj0ynbh2gz1cn86aw1"; depends=[]; }; praznik = derive2 { name="praznik"; version="5.0.0"; sha256="01xbhcgvq6mf89ryh2gif7aa9956kpka3j4mqaxlglxs53vdrfnk"; depends=[]; }; - prc = derive2 { name="prc"; version="2018.1-31"; sha256="0xvf1f202qwpjb1kh469jk45l592q7bfzngyi8ifry94bi7mphp7"; depends=[kyotil nlme]; }; + prc = derive2 { name="prc"; version="2018.8-17"; sha256="13w6nqid3dqmzr39g14g0kgx727qvimyb20x0i206lj37cl347i2"; depends=[kyotil nlme]; }; prcbench = derive2 { name="prcbench"; version="0.7.3"; sha256="0xdmwjhxpcdaiqawhmlpr4ddlx22xk3rywa70jpm1vk5hc9pwivk"; depends=[assertthat ggplot2 gridExtra memoise precrec PRROC R6 rJava ROCR]; }; prclust = derive2 { name="prclust"; version="1.3"; sha256="0p0sf8248aigs99py8mpzz743jnrf7n1nv5shag15arxz9yx7zn3"; depends=[Rcpp]; }; prcr = derive2 { name="prcr"; version="0.1.5"; sha256="1hfr0jijnj5nd25rh16i81bsz8kwz0q9vmn7bqgy467cwvypg9k2"; depends=[class dplyr ggplot2 irr lpSolve purrr tibble tidyr]; }; - pre = derive2 { name="pre"; version="0.5.0"; sha256="04dfn9nd0ikilz7cf7q0y7z5dn961jjg1gby7h46fixkwnf7fdfs"; depends=[earth Formula glmnet partykit rpart stringr]; }; + pre = derive2 { name="pre"; version="0.6.0"; sha256="19dxm2khdw9cizxm06z41ywl2imrc9nw42ldcpjm30qfa0xqldjn"; depends=[earth Formula glmnet partykit rpart stringr survival]; }; preText = derive2 { name="preText"; version="0.6.2"; sha256="0pcnqssv542cfajzrqfsbq0jf628nnmcb3nryvd7d5wk4wdkji4q"; depends=[cowplot ecodist ggplot2 proxy quanteda reshape2 topicmodels vegan]; }; precintcon = derive2 { name="precintcon"; version="2.3.0"; sha256="1sf0mfqa77aqhbx3hg8pv582ibmfnv6vigqcd3xqsbq7nigy2ms9"; depends=[ggplot2 scales]; }; precrec = derive2 { name="precrec"; version="0.9.1"; sha256="0kppl4x8ji8hzll5wss1nzlk8qvf4g78f14x4c2b8dcxjikgl939"; depends=[assertthat data_table ggplot2 gridExtra Rcpp]; }; - predatory = derive2 { name="predatory"; version="1.2"; sha256="1qbkifx16ixzimshm8lsg3d1y7cj453ksn8cpwy03xql6b19r8x4"; depends=[readr stringr]; }; prediction = derive2 { name="prediction"; version="0.3.6"; sha256="19d7312f5lkqfglfvlgssnvyw7gl161s0xradcry44r1i6qp05j1"; depends=[data_table]; }; predictionInterval = derive2 { name="predictionInterval"; version="1.0.0"; sha256="029hc57cblfcbqckrghf95l2rkn7acgb4yr36da01bx8bmpww0bn"; depends=[ggplot2 MASS MBESS pbapply]; }; - predictmeans = derive2 { name="predictmeans"; version="0.99"; sha256="1qfqh21d3m0k2491hv5rl5k4v49j5089xsdk3bxicp30l512rax0"; depends=[ggplot2 lattice lme4 nlme pbkrtest plyr]; }; + predictmeans = derive2 { name="predictmeans"; version="1.0.1"; sha256="06zspg1v0x1qqaah7xj5jdaqjv7asnzmgybyyzx3j26v4h59p350"; depends=[ggplot2 lme4 Matrix nlme numDeriv pbkrtest plyr]; }; predkmeans = derive2 { name="predkmeans"; version="0.1.0"; sha256="1xmzdv35hxnslffkj8nbahhxrxmv7995pkdq2igw72x9wbryqlhs"; depends=[e1071 maxLik mgcv Rcpp RcppArmadillo]; }; predmixcor = derive2 { name="predmixcor"; version="1.1-1"; sha256="0v99as0dzn0lqnbbzycq9j885rgsa1cy4qgbya37bbjd01b3pykd"; depends=[]; }; predtoolsTS = derive2 { name="predtoolsTS"; version="0.1.1"; sha256="0f9fapw9yjdzj6pwcskbyfwjsvg09ahn20vrv4bgi0dx8am291rl"; depends=[caret forecast Metrics tseries TSPred]; }; @@ -9884,20 +10309,20 @@ in with self; { presens = derive2 { name="presens"; version="2.1.0"; sha256="175nr9pqn3m6kh9bcc1gxqmqv05xdsqdw9lx385lmm1g947d2159"; depends=[marelac measurements]; }; preseqR = derive2 { name="preseqR"; version="4.0.0"; sha256="1g2rnnmi45649vpy6z45v5i3wxm54s138ajqrzwi3a5r7x3xnhq1"; depends=[polynom]; }; prettyGraphs = derive2 { name="prettyGraphs"; version="2.1.5"; sha256="19jag5cymancxy5lvkj5mkhdbxr37pciqj4vdvmxr82mvw3d75m4"; depends=[]; }; - prettyR = derive2 { name="prettyR"; version="2.2"; sha256="026cgbrqs799lg06qlwx1r9ramil790qxrb1cyl4w7mzf8sfpgn9"; depends=[]; }; - prettycode = derive2 { name="prettycode"; version="1.0.1"; sha256="0iw38q5yx92m71wrbp52d14bl3nqwpjrd57l2w9chasmlrjnl2aw"; depends=[crayon withr]; }; + prettyR = derive2 { name="prettyR"; version="2.2-2"; sha256="01p0g68c6k5hd4a80gmdsqd5sxy6n521ry5sh6iz06f0rbl3jlcf"; depends=[]; }; + prettycode = derive2 { name="prettycode"; version="1.0.2"; sha256="0yz75qqpvrk4p9mypjnmrg1xwlrhh2iax2897f11cfk8rjj784jg"; depends=[crayon withr]; }; prettydoc = derive2 { name="prettydoc"; version="0.2.1"; sha256="00amqn0izg2jrn96pmm5papqmp0chn25msjk94nim3avqg9x4x92"; depends=[rmarkdown]; }; prettymapr = derive2 { name="prettymapr"; version="0.2.2"; sha256="151jp0l728krmxcyzwjh01mvd1zhqijq0nsgjaqsh0q8n3jmndi0"; depends=[digest httr plyr rjson]; }; prettyunits = derive2 { name="prettyunits"; version="1.0.2"; sha256="0p3z42hnk53x7ky4d1dr2brf7p8gv3agxr71i99m01n2hq2ri91m"; depends=[assertthat magrittr]; }; prevR = derive2 { name="prevR"; version="3.3"; sha256="11syifnv0mgbybsphgaj3a2j29p2q0l4y4w008n2r9s359arjj8m"; depends=[directlabels fields foreign GenKern ggplot2 gstat maptools rgdal sp]; }; prevalence = derive2 { name="prevalence"; version="0.4.0"; sha256="0vnmglxj1p66sgkw4ffc4wgn0w4s281fk2yifx5cn4svwijv30q0"; depends=[coda rjags]; }; - pricesensitivitymeter = derive2 { name="pricesensitivitymeter"; version="0.3.2"; sha256="0hmqhsbpf8sbk5285mm8g0gi0s7s05dzbdci4fp3xyjn30659gdr"; depends=[]; }; + pricesensitivitymeter = derive2 { name="pricesensitivitymeter"; version="0.4.1"; sha256="1mk6i4rjcm938rpwd3b80y9x4vj45jsddzprzrig91dmmjp6b11i"; depends=[]; }; prim = derive2 { name="prim"; version="1.0.16"; sha256="0i5jpk798qbvyv9adgjbzpg4dvf7x51bcgbdp38fzdnam6g88y5a"; depends=[misc3d rgl]; }; primefactr = derive2 { name="primefactr"; version="0.1.1"; sha256="11hi75jwjxrl9p5m8yjwjb20pc9y9vkhi8sjrnisdq2hm53m483w"; depends=[]; }; primer = derive2 { name="primer"; version="1.0"; sha256="0vkq794a9qmz9klgzz7xz35msnmhdaq3f91lcix762wlchz6v7sg"; depends=[deSolve lattice]; }; primerTree = derive2 { name="primerTree"; version="1.0.3"; sha256="0k81h6ln9yjg3r4j8n5f8g8xlrq1pvrr5ywrw16s4mjjhx3r1ylg"; depends=[ape directlabels foreach ggplot2 gridExtra httr lubridate plyr scales stringr XML]; }; primes = derive2 { name="primes"; version="0.1.0"; sha256="0hhkgpkadvai9xcivfalsvr5w0irsxygyz3p2zngwl3g5rvvh5g9"; depends=[Rcpp]; }; - princurve = derive2 { name="princurve"; version="2.0.3"; sha256="1yc14nychxk2ddhqd2v7cfpx5hgdspxcrg42kvs5jvic54dbjjc2"; depends=[Rcpp]; }; + princurve = derive2 { name="princurve"; version="2.1.3"; sha256="12ngs63n6qjx08ks99h8m2nyr3h8ygznq5j8ag6ic8p65pis5pdp"; depends=[Rcpp]; }; prinsimp = derive2 { name="prinsimp"; version="0.8-8"; sha256="074a27ml0x0m23hlznv6qz6wvfqkv08qxh3v1sbkl9nxrc7ak4vn"; depends=[]; }; printr = derive2 { name="printr"; version="0.1"; sha256="13yqqcwfqnbhvcxwrr6j45qhnbxng3qwn2ygkr809gibg9grw471"; depends=[knitr]; }; prioritizr = derive2 { name="prioritizr"; version="4.0.2"; sha256="1v5bkarsgi40w9afalsjfgl7azd1q4lzwr0ipw761cnqcnhkkmkh"; depends=[ape assertthat BH data_table doParallel igraph magrittr Matrix plyr proto raster Rcpp RcppArmadillo rgeos sp tibble uuid]; }; @@ -9907,22 +10332,25 @@ in with self; { prisonbrief = derive2 { name="prisonbrief"; version="0.1.0"; sha256="1fnhg6vqdabdnhvgd19vnkfrdgz8a53snfrx6m6mmdwb6cvavb8m"; depends=[data_table dplyr httr magrittr passport rlang rnaturalearth rnaturalearthdata rvest stringr tibble tidyr xml2]; }; pro = derive2 { name="pro"; version="0.1.1"; sha256="0f0iliq7bhf313hi0jbwavljic4laxfc0n3gac5y6hzm39gvvgag"; depends=[]; }; proPubBills = derive2 { name="proPubBills"; version="0.1"; sha256="1fpn9x31jjahdyk0f30mbb3ijj4dsghrq9q94r04pjsgr2jw23zx"; depends=[dplyr httr stringr]; }; + prob = derive2 { name="prob"; version="1.0-1"; sha256="05qcrsl790hn7p3ap4zj5i1b1sf674wvvrh42lyb7a0nsc09iq9n"; depends=[combinat fAsianOptions]; }; probFDA = derive2 { name="probFDA"; version="1.0.1"; sha256="093k50kyady54rkrz0n9x9z98z5ws36phlj42j25yip7pzhfd6sv"; depends=[MASS]; }; probemod = derive2 { name="probemod"; version="0.2.1"; sha256="1cgjr03amssc9rng8ky4w3abhhijj0d2byzm118dfdjzrgmnrf9g"; depends=[]; }; probout = derive2 { name="probout"; version="1.1.1"; sha256="1hasrvxdig8n3fhzsbmq27050dyanzp1j0qlybnrkb41k9gyljda"; depends=[FNN MASS mclust]; }; probsvm = derive2 { name="probsvm"; version="1.00"; sha256="1k0zysym7ncmjy9h7whwi49qsfkpxfk7chfdjrydl6hn6pscis37"; depends=[kernlab]; }; proccalibrad = derive2 { name="proccalibrad"; version="0.14"; sha256="0vr55rpcqh9wvy3bklssrimp42x85w3sanjgshfij657v68vmx46"; depends=[]; }; - processanimateR = derive2 { name="processanimateR"; version="0.1.1"; sha256="1him2rdamg4q2kidc7a95pgihhcwfaz678cgdxgzz563dlgqkgac"; depends=[bupaR DiagrammeR DiagrammeRsvg dplyr htmlwidgets magrittr processmapR RColorBrewer rlang scales shiny shinycssloaders tidyr zoo]; }; + processanimateR = derive2 { name="processanimateR"; version="0.3.0"; sha256="18bzn4x0aiv1z0ips2wkyb5pvdbq1fxh4mi430i44qn64z88wasi"; depends=[bupaR DiagrammeR dplyr htmlwidgets magrittr processmapR rlang scales zoo]; }; + processcheckR = derive2 { name="processcheckR"; version="0.1.0"; sha256="1arckp3m9z9idq8dq6aghijc6h8i6giir606h1viivrwj0ks0f90"; depends=[bupaR dplyr edeaR glue rlang stringr]; }; processcontrol = derive2 { name="processcontrol"; version="0.1.0"; sha256="0c0bksgq24blfkdgp5bn49sjnaajrg5bag8qzb5zffxbhnm4s30x"; depends=[plyr]; }; processmapR = derive2 { name="processmapR"; version="0.3.2"; sha256="0j42791qarxrn5ianbndbx0rkq6av4gvrxjl92svzki1mv5cl59n"; depends=[bupaR data_table DiagrammeR dplyr edeaR forcats ggplot2 ggthemes glue hms miniUI plotly purrr RColorBrewer rlang scales shiny stringr viridis]; }; processmonitR = derive2 { name="processmonitR"; version="0.1.0"; sha256="1ckr438yifpsh095j6bb65dq3rdm7cfm8k7qsjmcqwjkww4j74z8"; depends=[bupaR dplyr edeaR ggplot2 magrittr miniUI shiny]; }; - processx = derive2 { name="processx"; version="3.1.0"; sha256="0wjr3cqwvnjxbvln25szffmkns5w0xysivdjr6chxap4nh515b0i"; depends=[assertthat crayon R6 testthat]; }; + processx = derive2 { name="processx"; version="3.2.0"; sha256="1pzx4ap4xa07gf9zkd6hacdsnb9sp3kb60a7v7ljl0ywrcpn1fn4"; depends=[assertthat crayon ps R6]; }; prodest = derive2 { name="prodest"; version="1.0.1"; sha256="16nqgd9wrjfxymwbxrnlak54cagbv3fxgbql0w5bxnmyrbbqy509"; depends=[AER DEoptim dplyr Matrix Rsolnp]; }; prodigenr = derive2 { name="prodigenr"; version="0.4.0"; sha256="1rbfg3jzspw51lbhjbdy0wy5fgl3k3cnb324i73nbgjn7ycmpfqx"; depends=[clipr clisymbols crayon desc devtools fs git2r rmarkdown rprojroot usethis withr]; }; prodlim = derive2 { name="prodlim"; version="2018.04.18"; sha256="1aslq87sqwikh8chxc378r38146y7kv79zz0kcq3j93ivx7va8jb"; depends=[KernSmooth lava Rcpp survival]; }; productivity = derive2 { name="productivity"; version="1.1.0"; sha256="1g8b4vlyqq3xyzd4dki01glhc3g9j3ywgwpxylkmzp0ivqic53yc"; depends=[doParallel foreach iterators lpSolveAPI]; }; productplots = derive2 { name="productplots"; version="0.1.1"; sha256="1igs6d0qwgsfk0z3vxabgv5kva9w2kpzi535gjfdrbx34j4pf3gx"; depends=[ggplot2 plyr]; }; prof_tree = derive2 { name="prof.tree"; version="0.1.0"; sha256="0mjvxaacrgkzl0f1wn3fpgah4jh720safni66ri0dnriwcxis6rz"; depends=[data_tree]; }; + profExtrema = derive2 { name="profExtrema"; version="0.2.0"; sha256="13fn32v4jryyw2sc6g76fmf2ivbwql0z39wqpl6ggmiwnj95sfm7"; depends=[DiceKriging KrigInv lhs MASS microbenchmark pGPx quantreg rcdd RColorBrewer]; }; profdpm = derive2 { name="profdpm"; version="3.3"; sha256="07lhjavrx4fa5950w928mfpddmmnmvdapl5n6mv49m8h3bxs4nmy"; depends=[]; }; profile = derive2 { name="profile"; version="1.0"; sha256="0m7fm490gqkbmnbdq3lac87zqb9qyx6546rlpa130rq1jnlgxfp6"; depends=[rlang tibble withr]; }; profileModel = derive2 { name="profileModel"; version="0.5-9"; sha256="1p9b9jr5842im195d60ja82pp7vbk85vs8b0r3fnf62j4b92aky9"; depends=[]; }; @@ -9936,10 +10364,10 @@ in with self; { prognosticROC = derive2 { name="prognosticROC"; version="0.7"; sha256="0lscsyll41hpfzihdavygdzqw9xxjp48dmy4i17qsx5h01jl1h4i"; depends=[survival]; }; progress = derive2 { name="progress"; version="1.2.0"; sha256="1rhwm0bdw30z3rvl0bn56xprjl3zrdy7150w4gl4bkvn2d6h9fav"; depends=[crayon hms prettyunits R6]; }; proj4 = derive2 { name="proj4"; version="1.0-8"; sha256="06r3lavgixrsa52d1v31laqcbw6fb9xn23akv39hvaib78diglv9"; depends=[]; }; - projections = derive2 { name="projections"; version="0.3.0"; sha256="1zhyylbp10g2syfj8mybr5cas68wf4h4fk3s7cca4iiihnglcfwz"; depends=[distcrete ggplot2 incidence]; }; + projections = derive2 { name="projections"; version="0.3.1"; sha256="12vskql6x04jzik72a0vx83amfj01w9f7mxn052vsv7aaljbi124"; depends=[distcrete ggplot2 incidence]; }; projector = derive2 { name="projector"; version="0.0.2"; sha256="15n5b2xgs0zj87pc3svlmnkjrxgkjkx941g8bs3ms90fg7nh2drc"; depends=[assertthat dbscan plotly RColorBrewer RcppAnnoy Rtsne shiny shinyjs shinythemes]; }; - projmanr = derive2 { name="projmanr"; version="0.1.1"; sha256="0mmfmp5qf4r75q4hjbra2pxym77m16g28n94z5yj2qdzq46hgl4c"; depends=[ggplot2 igraph R6 tidyr]; }; - projpred = derive2 { name="projpred"; version="0.8.0"; sha256="06wi8lc88xm45drqhb3mcq5l1g1zm2msgi1m0857vldg6828gjbq"; depends=[ggplot2 loo Rcpp RcppArmadillo rngtools rstan rstanarm]; }; + projmanr = derive2 { name="projmanr"; version="0.2.1"; sha256="0pj2a79xnhkwik7lq1gm9jv30pkjgv057yd9nlmb58mf2097i7an"; depends=[ggplot2 igraph mc2d R6 Rcpp tidyr]; }; + projpred = derive2 { name="projpred"; version="1.1.0"; sha256="03lfzlhrch7l87vmpfvyiggq12bzj45kkqp0dy307jnrvfzx9lb1"; depends=[ggplot2 loo Rcpp RcppArmadillo rngtools]; }; promises = derive2 { name="promises"; version="1.0.1"; sha256="0n2mlv6bvfb4yhgcml696l9vkbw21pz0smqylivr606z99rwgny2"; depends=[later magrittr R6 Rcpp rlang]; }; promote = derive2 { name="promote"; version="1.0.2"; sha256="0nxbwy6ls7bn0dqxa87a2gc74yvpyvsvn03q4v0sy3jmdyca0c73"; depends=[httr jsonlite stringr]; }; prop_comb_RR = derive2 { name="prop.comb.RR"; version="1.2"; sha256="10s52fkq7rv6v4gw1yd46f0fbg89ksim0qhgb5jbglzrqh585ny5"; depends=[rootSolve]; }; @@ -9948,7 +10376,7 @@ in with self; { properties = derive2 { name="properties"; version="0.0-9"; sha256="1zd66cg31yd53rqsc0cwxhlpfn7kvc67qdh3vyj9qib8kwxaw1zl"; depends=[]; }; prophet = derive2 { name="prophet"; version="0.3.0.1"; sha256="0ays7qn8vsa8kwzh5fk0b7nbd0l72yczjbg9h0ajkyywz3jda3fv"; depends=[dplyr dygraphs extraDistr ggplot2 Rcpp rstan scales tidyr xts]; }; proportion = derive2 { name="proportion"; version="2.0.0"; sha256="0a71f6hz6blb7550m9x0di84vp51yjhnn952301rwlrh3axf6dbr"; depends=[ggplot2 TeachingDemos]; }; - propr = derive2 { name="propr"; version="3.5.1"; sha256="0wja6snr1hd1ms3wzg6scvs30zip5kbq0jx2j31dxrmy6fwd4h2j"; depends=[fastcluster ggplot2 igraph Rcpp]; }; + propr = derive2 { name="propr"; version="4.0.0"; sha256="1bqprryww8qhivklla2jv0ygy49321racs2msmw4g5y6gpi29593"; depends=[fastcluster ggplot2 igraph Rcpp]; }; prospectr = derive2 { name="prospectr"; version="0.1.3"; sha256="18lh03xg6bgzsdsl56bjd63xdp16sqgr3s326sgifkkak8ffbv7q"; depends=[foreach iterators Rcpp RcppArmadillo]; }; protViz = derive2 { name="protViz"; version="0.3.1"; sha256="1im3ajimycsc1zpzbihxlsibjk0462q0vldy7v5ypsqnjbi1ndxm"; depends=[Rcpp]; }; proteomicdesign = derive2 { name="proteomicdesign"; version="2.0"; sha256="01s47pgwxy4xx10f3qmbfv59gbaj0qw017kpkpsn33s8w7ad63r0"; depends=[MASS]; }; @@ -9960,35 +10388,38 @@ in with self; { protolite = derive2 { name="protolite"; version="1.8"; sha256="05w5lgf255agj70qdyjm64ci9j0pncz0k0bxhq2cxjbkv09169lr"; depends=[jsonlite Rcpp]; }; proton = derive2 { name="proton"; version="1.0"; sha256="1mgaw54is8l6ac1rf8s70rj7kv9xgsfdrlvjz01ggfwg7c6pyr3s"; depends=[digest]; }; prototest = derive2 { name="prototest"; version="1.1"; sha256="0v65abrn73wgwnrrf6gv9f7p0qy12xlk9ishq9lq4qal1wlsrrjs"; depends=[glmnet intervals MASS Rcpp RcppArmadillo]; }; - protr = derive2 { name="protr"; version="1.5-0"; sha256="1mi14hph6cqdsgjw4p00miaa4bh2axkwfcmxaiv7f7v4dk8i52y1"; depends=[]; }; + protr = derive2 { name="protr"; version="1.5-1"; sha256="1hy10pd7lycnagjfbb8a6csprb1x0b30g5d0mwpp5jz2d1nadpgh"; depends=[]; }; proustr = derive2 { name="proustr"; version="0.2.1"; sha256="17syaxfrwm9kh5q825hj7bsrvi4h9avpdabw9y0vq20y87w8cq1s"; depends=[assertthat dplyr magrittr purrr rlang SnowballC stringr tidyr tokenizers]; }; - provenance = derive2 { name="provenance"; version="2.0"; sha256="1775dxxk506nwaigyjsvprf4fibmiamwp7p7cl01g3mbr4gyrm0z"; depends=[IsoplotR MASS]; }; + provenance = derive2 { name="provenance"; version="2.2"; sha256="1g70s5pwgb3cvw4vgxxqp4gi5qi3d02ldq09n4kildms4shxgsmn"; depends=[IsoplotR MASS]; }; proxy = derive2 { name="proxy"; version="0.4-22"; sha256="0l0ff8irmmvic941is290hd5vszyhaj5nfwna4v3w9c1zk5nr1ma"; depends=[]; }; - prozor = derive2 { name="prozor"; version="0.2.3"; sha256="1686lfmzmzl1488xnppv95hfr83gf67xfzqsw49gdas0aba3plhh"; depends=[AhoCorasickTrie doParallel foreach Matrix plyr seqinr stringr]; }; + prozor = derive2 { name="prozor"; version="0.2.11"; sha256="1a2k69fvgi6vxgczk81kh8r2jxc6nirc51w6ac239rqjzb1zyhjm"; depends=[AhoCorasickTrie doParallel dplyr foreach Matrix plyr readr seqinr stringr]; }; prrd = derive2 { name="prrd"; version="0.0.2"; sha256="0ifs55yqvwbcs3xyc90yi763fgavdhajk1ba73g1kchn2ak39qhb"; depends=[config crayon data_table DBI liteq RSQLite]; }; pryr = derive2 { name="pryr"; version="0.1.4"; sha256="06vj5xl9x37kbd3l5bw7sbgfdnp37spvrjrn976rxi04clqk966k"; depends=[codetools Rcpp stringr]; }; + ps = derive2 { name="ps"; version="1.2.0"; sha256="0ai8igdkysmks1ihbp3h3s552da2hskxqwrvp4cx7vwn91x9f3wd"; depends=[]; }; psData = derive2 { name="psData"; version="0.2.2"; sha256="013hb6lk9rm2w08m5jbw90ndrcd4wyy2h125jx07c9bs60wh4mp4"; depends=[countrycode DataCombine reshape2 rio xlsx]; }; psbcGroup = derive2 { name="psbcGroup"; version="1.4"; sha256="0l1hmgw4sislryws8hv7r2nglhcs6g9khg0372a70djvhz2l6gfi"; depends=[LearnBayes mvtnorm SuppDists]; }; pscl = derive2 { name="pscl"; version="1.5.2"; sha256="1phf3awsfr4ncqfqzin5m1pz0g7y1zhbcm2sz7358ssw914fd7rc"; depends=[MASS]; }; pscore = derive2 { name="pscore"; version="0.1-2"; sha256="1sfkxs2kv8lq87j3q9ci7j38c7gzfkp2l36lwcdhiidr2nls2x0c"; depends=[ggplot2 lavaan reshape2]; }; psd = derive2 { name="psd"; version="1.0-1"; sha256="1ssda4g98m0bk6gkrb7c6ylfsd2a84fq4yhp472n4k8wd73mkdn6"; depends=[RColorBrewer Rcpp RcppArmadillo signal zoo]; }; - psda = derive2 { name="psda"; version="1.0.0"; sha256="0zsvm6rqcxv186xbi8nqd4ak93lhrm1hp7339cks140vdp8yl7ys"; depends=[ggplot2 plyr raster rgeos sp]; }; + psda = derive2 { name="psda"; version="1.0.1"; sha256="0hqagrylfllc7mxbnsgxvc2qb3av1wh6ck7y0bs331s4paz0b2mc"; depends=[ggplot2 plyr raster rgeos sp]; }; pse = derive2 { name="pse"; version="0.4.7"; sha256="0kigfzsvx3gw7jwym4f19dydwwarwxgmha7hpy54gg0zzi4k9icl"; depends=[boot Hmisc]; }; pseudo = derive2 { name="pseudo"; version="1.4.3"; sha256="0ccf3gz2g7g5y4acpj2qnb39hrghhdganizlddg6rx7al869fffs"; depends=[geepack KMsurv]; }; - pseudorank = derive2 { name="pseudorank"; version="0.2.0"; sha256="17zr5q76l0y57n7am3c6zg3cwrhcvv2l8q561jcasacp16yg4gy3"; depends=[doBy Rcpp]; }; + pseudorank = derive2 { name="pseudorank"; version="0.3.7"; sha256="1wrf91z75yw88wy1b42z05z7lnykvnfkf8mi9li8108m4k9b13rk"; depends=[doBy Rcpp]; }; pseval = derive2 { name="pseval"; version="1.3.0"; sha256="1iv3fa7ar9i7v9j5axbasmn8l8nvry4zvmb7fd8aql82f22szmbj"; depends=[survival]; }; psgp = derive2 { name="psgp"; version="0.3-18"; sha256="1jfkqwqnmzj3m1d9gxbp2rjkbqb0di75gh78zg861by5qhhaz1a7"; depends=[automap doParallel foreach gstat intamap Rcpp RcppArmadillo rgdal sp]; }; - psidR = derive2 { name="psidR"; version="1.5"; sha256="02cyy1dqgg6mcqyvb0py674lyhhk3h0zi9p02yqacbr81swsjpam"; depends=[data_table foreign httr openxlsx RCurl SAScii XML]; }; + psidR = derive2 { name="psidR"; version="1.9"; sha256="0ljfjxsj6krxyk3ss1n0ccymca4hiwkp9fdb1h1l4rqm0dsj8jj8"; depends=[data_table foreign futile_logger openxlsx RCurl SAScii]; }; pso = derive2 { name="pso"; version="1.0.3"; sha256="0alar695c6kc1rsvwipsrvlxc93f3sy9l0yhp0mggyqgxkkvy406"; depends=[]; }; psoptim = derive2 { name="psoptim"; version="1.0"; sha256="1yziabkd3h05cfl5jy5l8ji2y3w21acvxsq3inxyh0iwyr8qdkkl"; depends=[]; }; pspearman = derive2 { name="pspearman"; version="0.3-0"; sha256="1l5mqga7b5nvm6v9gbl1xsspdqsjqyhhdn4gc4qlz6ld7fqfq6cx"; depends=[]; }; pspline = derive2 { name="pspline"; version="1.0-18"; sha256="1iwsw52miil1v1yl99mzl28qi8gdjr56rlasmh8faqjlpn9z477p"; depends=[]; }; pssm = derive2 { name="pssm"; version="1.1"; sha256="0r3d1mzc7bcz238lqq4y518400m2dqm5a1fb9gkfiari1ax099lv"; depends=[abind MASS MHadaptive numDeriv]; }; + pssmooth = derive2 { name="pssmooth"; version="1.0.1"; sha256="0g43fkls36lsv3z79326x6g1d370dym8879700lq29wl5fslp3an"; depends=[chngpt MASS np osDesign]; }; pstest = derive2 { name="pstest"; version="0.1.1"; sha256="0k8413ilpbz23v210wz80mli7ajpc8p7y4pbn1za371qw04b81c5"; depends=[harvestr]; }; psy = derive2 { name="psy"; version="1.1"; sha256="027whr670w65pf8f7x0vfk9wmadl6nn2idyi6z971069lf01wdlk"; depends=[]; }; psych = derive2 { name="psych"; version="1.8.4"; sha256="1kzv9nc7rwn1sj1zxd8xrbs6c7qlka7j2c8lsr4f20znkd3qx8gf"; depends=[foreign lattice mnormt nlme]; }; - psychmeta = derive2 { name="psychmeta"; version="2.1.1"; sha256="0sjsmzncbzqrhcmv221jliqvfhdd70ysrxax9dprsl8kyyvifvrl"; depends=[boot cli crayon data_table dplyr fungible ggplot2 knitr MASS metafor nor1mix progress purrr RCurl RefManageR reshape2 rlang rmarkdown stringi stringr tibble tidyr tmvtnorm xml2]; }; - psycho = derive2 { name="psycho"; version="0.2.8"; sha256="0739y1svarfw6v4jrf3q6n0vnb6wfij9dnmvzvn87wg8rsp0bvrl"; depends=[BayesFactor broom coda DescTools dplyr emmeans ggcorrplot ggplot2 lavaan lmerTest loo MASS MuMIn nFactors pbkrtest ppcor psych purrr qgraph rstanarm rstantools scales stringr tibble tidyr]; }; + psychReport = derive2 { name="psychReport"; version="0.2"; sha256="1pmxknfvrkwfsa1xw1a6nv9ms0ivrpm7pzzr7az8blj5hnpqm8d5"; depends=[cli crayon dplyr ez reshape2 testthat xtable]; }; + psychmeta = derive2 { name="psychmeta"; version="2.2.1"; sha256="0x5yxzd78xfz9sbbzx4yxa1vbgwj70fiiiypkk0bai5wjhx40c8v"; depends=[boot cli crayon data_table dplyr ggplot2 knitr MASS metafor nor1mix progress purrr RCurl RefManageR reshape2 rlang rmarkdown stringi stringr tibble tidyr tmvtnorm xml2]; }; + psycho = derive2 { name="psycho"; version="0.3.7"; sha256="0n9cj841mjf661cik6xyd7hhhw1dm0yshhg8fh3iq15gn88bgmqi"; depends=[BayesFactor broom coda DescTools dplyr emmeans ggcorrplot ggplot2 lavaan lme4 lmerTest loo MASS MuMIn nFactors ppcor psych purrr qgraph rstanarm rstantools scales stringr tibble tidyr]; }; psychometric = derive2 { name="psychometric"; version="2.2"; sha256="1b7cx6icixh8k3bv60fqxjjks23qn09vlcimqfv2x3m3nkf8p1s9"; depends=[multilevel nlme]; }; psychomix = derive2 { name="psychomix"; version="1.1-4"; sha256="15yk3z11w4bzk6vljr13bkfhzycypww6blc1djb5iwl635xq1c49"; depends=[flexmix Formula lattice modeltools psychotools]; }; psychotools = derive2 { name="psychotools"; version="0.4-3"; sha256="023cfh9ks8cdk458g4yvjhdy8g9vkcabgpj24bcs46r8nga3adjv"; depends=[]; }; @@ -10001,10 +10432,11 @@ in with self; { ptw = derive2 { name="ptw"; version="1.9-13"; sha256="0iighsx6xn8nbw4qpzmwgi4czmr5m8yrr7fzm7mx7cvx2r5ffmbq"; depends=[nloptr]; }; ptwikiwords = derive2 { name="ptwikiwords"; version="0.0.3"; sha256="129dad1vy52sf97dqrkwa49vjhv2kvs4pmd5zvq8pxd51hqm6wy9"; depends=[]; }; ptycho = derive2 { name="ptycho"; version="1.1-4"; sha256="1llk3rpk0lf80vwvs23d6dqhgyic3a6sfjc393csj69hh01nrdvc"; depends=[coda plyr reshape2]; }; - pubh = derive2 { name="pubh"; version="0.2.2"; sha256="13byp5xha102h9y8dhka4fz9gdan4gshcy6bvkgvkj106h7zhy4q"; depends=[bookdown car descr effects Epi epiR epitools gee lattice latticeExtra lme4 lmtest MASS multcomp nlme nnet ordinal pander papeR rmdformats sandwich survival]; }; - pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.12"; sha256="04zb5lbjdrhdpam4xmkcc947icsnias5pxbv2pwhvyhk7mz16nya"; depends=[boot R2HTML RCurl XML]; }; + pubchunks = derive2 { name="pubchunks"; version="0.1.0"; sha256="1mi5vzm80fm0vbh9kmmsh7kmgc915i1f1yi2kyw2d3mg98jld9xj"; depends=[data_table xml2]; }; + pubh = derive2 { name="pubh"; version="0.4.2"; sha256="1g5w600iwpazdm445xn8b22gdr0fx9pyjsignlhrvw65dw7pgykh"; depends=[bookdown car desctable effects Epi epiR epitools knitr latex2exp lattice latticeExtra lme4 lmtest MASS multcomp nlme nnet ordinal pander papeR sandwich survival tactile]; }; + pubmed_mineR = derive2 { name="pubmed.mineR"; version="1.0.13"; sha256="17pb5y5savh9iga3i7pyp32j41jwfac0vl538gln3n371x5fjh2r"; depends=[boot R2HTML RCurl XML]; }; pullword = derive2 { name="pullword"; version="0.2"; sha256="14rln0nbd4k2cvf18iwvc56776b9g3m3cs67i7fgzabfrgj8y6db"; depends=[RCurl]; }; - pulsar = derive2 { name="pulsar"; version="0.3.3"; sha256="1lhc9cvxkxvjcl2hi2kivwqp4gddq32kysy1rhpi34i9w0y3gav6"; depends=[Matrix]; }; + pulsar = derive2 { name="pulsar"; version="0.3.4"; sha256="076bakisgw2sv4mv9a21ky97zdz7wr733xylpdczmyyhhqi0n8yp"; depends=[Matrix]; }; pumilioR = derive2 { name="pumilioR"; version="1.3.1"; sha256="1791r5lkr6hafd2rz9f9nfy5vc03c4833f292khvd2cg43sb0bfc"; depends=[RCurl XML]; }; puniform = derive2 { name="puniform"; version="0.1.0"; sha256="16s5qk17wnag7fqgslxpayaq6nczaj2izgdkrkcssgjxfwnanzgm"; depends=[ADGofTest metafor Rcpp]; }; purge = derive2 { name="purge"; version="0.2.1"; sha256="1faf8mkaxsnj63wnig5rs50hd3j6vzaj0xkdz8kn0j7y2vvshp9p"; depends=[]; }; @@ -10015,11 +10447,10 @@ in with self; { pvclass = derive2 { name="pvclass"; version="1.4"; sha256="1g6x75qz3xybq1xnik0hzi7mcs0gzzqd3f0iwfkzi5d1zcddnw13"; depends=[Matrix]; }; pvclust = derive2 { name="pvclust"; version="2.0-0"; sha256="0hfpf257k5f1w59m0zq6sk0gaamflc3ldkw6qzbpyc4j94hiaihs"; depends=[]; }; pvsR = derive2 { name="pvsR"; version="0.3"; sha256="1ijmqlcsc8z0aphdd3j37ci8yqsy50wnr2fwn7h8fxbyd12ax2nj"; depends=[httr nnet XML]; }; - pweight = derive2 { name="pweight"; version="0.0.1"; sha256="0pxxfrap1bmnhbfbmkddfbqwkpw42hq37s0y26zmkxqlx4wblira"; depends=[qqman]; }; pwr = derive2 { name="pwr"; version="1.2-2"; sha256="0r5g781lr677vp3zyhgmi7r68c87l8gd05l1s3ffnxgn5wf043sm"; depends=[]; }; pwr2 = derive2 { name="pwr2"; version="1.0"; sha256="0zfv7z5yymw310r1sqm8ivsc2pv6dgk2k4b1axmm92gsaj53cn7p"; depends=[]; }; pwrAB = derive2 { name="pwrAB"; version="0.1.0"; sha256="0ifyw40m9gsijw3vm9qb8qk4yydmdixfdpdp45x2hk93j8v61jm1"; depends=[]; }; - pwrFDR = derive2 { name="pwrFDR"; version="1.90"; sha256="1lphq62k33wd1ay18gyl62yg6d57j2hhyk1pxz67qv5ywj73r34s"; depends=[]; }; + pwrFDR = derive2 { name="pwrFDR"; version="1.95"; sha256="0xphr4zrn7cav66kw6g52nhc8vvxacvmflvzy32gqy5l7jc89f4q"; depends=[]; }; pwrRasch = derive2 { name="pwrRasch"; version="0.1-2"; sha256="13fr4yfk8aky1vv36pllx673l4lg9q7i661vbyn2zabyizd2rw3b"; depends=[]; }; pwt = derive2 { name="pwt"; version="7.1-1"; sha256="0926viwmwldmzlzbnjfijh00wrhgb0h4h0mlrls71pi5pjfldifa"; depends=[]; }; pwt8 = derive2 { name="pwt8"; version="8.1-1"; sha256="1iig0x90ilzh3hdki0h33qgrra8r94rw4bk1x8y7i6c1may8y0v6"; depends=[]; }; @@ -10029,8 +10460,10 @@ in with self; { pycno = derive2 { name="pycno"; version="1.2"; sha256="0ha5css95xb98dq6qk98gnp1al32gy6w5fkz74255vs4hmkwfzw2"; depends=[maptools rgeos sp]; }; pyinit = derive2 { name="pyinit"; version="1.0.2"; sha256="148b8l5a8c636rgm8dwd8v6ggw9qmkafc5a40bciqc4rk09lfhl3"; depends=[robustbase]; }; pyramid = derive2 { name="pyramid"; version="1.4"; sha256="0hh0hmckicl0r2r9zlf693j65jr9jgmiz643j2asp57nbs99lgxz"; depends=[]; }; + pysd2r = derive2 { name="pysd2r"; version="0.1.0"; sha256="1dqvgdxj6m683wkjyjhv685xnhl9328bm921zphm1i9p70fahs0n"; depends=[knitr reticulate tibble]; }; + pzfx = derive2 { name="pzfx"; version="0.1.0"; sha256="1j4jrkn1qh6902xz0zmyj1y2nzpy2cbvv8qryb9gxm5jpk6zy97i"; depends=[xml2]; }; qCBA = derive2 { name="qCBA"; version="0.3.1"; sha256="0lr97hig9c4l9k7vjalvgar4f1dic1lqf91li4q63j07lgdyvh4c"; depends=[arc arules rJava]; }; - qGaussian = derive2 { name="qGaussian"; version="0.1.6"; sha256="0j8n4y4yzidkp52db73zv2snx0kwpg3aiz7vr82ybq3x9scy8c4n"; depends=[Rcpp robustbase zipfR]; }; + qGaussian = derive2 { name="qGaussian"; version="0.1.8"; sha256="02xy35xg4swr1ldnsbywnz2h0ga1pbsivnj0aqmpll7kvwl9qz4c"; depends=[Rcpp robustbase zipfR]; }; qLearn = derive2 { name="qLearn"; version="1.0"; sha256="1ilxmgazm8gjz8c1hhbp4fccibnvnalxrag8b0rn081zsqmhf094"; depends=[]; }; qPCR_CT = derive2 { name="qPCR.CT"; version="1.1"; sha256="19j41fsd2m7p2nxi2h2mj43rjxx6sz2jpf4sk0bfvl1gyj0iz3hi"; depends=[RColorBrewer]; }; qVarSel = derive2 { name="qVarSel"; version="1.0"; sha256="13x2hnqjsm0ifzmqkkl9ilhykrh80q04lhlkkp06hkysmh5w9rkx"; depends=[lpSolveAPI Rcpp]; }; @@ -10052,19 +10485,20 @@ in with self; { qgtools = derive2 { name="qgtools"; version="1.0"; sha256="0irqfaj2qqx7n1jfc0kmfpgzqrhwwlj0qizsmya94zk9d27bcpn5"; depends=[MASS Matrix]; }; qha = derive2 { name="qha"; version="0.0.8"; sha256="0sdf6g6884wn73i237xkwszg2mq8xddhvyy225qzpplh5za4pnhl"; depends=[ade4 FactoClass FactoMineR]; }; qicharts = derive2 { name="qicharts"; version="0.5.5"; sha256="0bl1f64b5n8q9jhzh3rqfyh9613qiy9mhcy2xsn16jyrj4hmj0jd"; depends=[ggplot2 lattice latticeExtra scales]; }; - qicharts2 = derive2 { name="qicharts2"; version="0.4.0"; sha256="0dd7jn7g7b85yvq39ykl75jdixk3dpinscsizxqwcfcjyhpvszq6"; depends=[dplyr ggplot2 scales]; }; + qicharts2 = derive2 { name="qicharts2"; version="0.5.1"; sha256="1xix0k62zrw6f29fb5yz97lkms669070i42nfdgz64b77axhqjcl"; depends=[dplyr ggplot2 scales]; }; qiimer = derive2 { name="qiimer"; version="0.9.4"; sha256="0argspi9pin2gjsg0qkl28hj3bw8svfab1cy410zlq76qdnmg7df"; depends=[pheatmap]; }; qiitr = derive2 { name="qiitr"; version="0.1.0"; sha256="1p0mcwgzvbib20l05wrnshkqx99vwr69dgy15dfwp75skyy5l797"; depends=[httr jsonlite purrr rstudioapi]; }; qlcData = derive2 { name="qlcData"; version="0.2.1"; sha256="0n1r7462zmyzkyi7mp3hf7pn7bgw1m1zs9flm3n199kjm8f6yyzy"; depends=[ape data_tree docopt phytools shiny stringi yaml]; }; qlcMatrix = derive2 { name="qlcMatrix"; version="0.9.7"; sha256="0iqkcvvy8rxlk0s83sjq57dd6fadb18p5z31lzy0gnzv1hsy1x8y"; depends=[docopt Matrix slam sparsesvd]; }; qlcVisualize = derive2 { name="qlcVisualize"; version="0.1.0"; sha256="13rc4z7rz7vngrkxq09flhszvcbg6i7drdkdp8kmvgcxf0im6lv0"; depends=[alphahull fields mapdata mapplots maps maptools MASS qlcMatrix raster seriation sp spatstat]; }; - qle = derive2 { name="qle"; version="0.17-1"; sha256="1zsvmnxdfd6avr14z5101i4kmks87yrsn15wiq5sx8gsfbxksjkj"; depends=[digest expm lhs mvtnorm nloptr]; }; + qle = derive2 { name="qle"; version="0.18"; sha256="0b2g5sgx1p94bwc1fivbqy3avgn8f95vy1m1nzv3y67615pa251n"; depends=[digest expm lhs mvtnorm nloptr]; }; qmap = derive2 { name="qmap"; version="1.0-4"; sha256="02xvq1mw83gln7phacbi3vhkvb100crggbldv13mhwq3wjnmg5k2"; depends=[fitdistrplus]; }; qmethod = derive2 { name="qmethod"; version="1.5.4"; sha256="1c64b7jy9llz5dhfnk75yamjva043213gd08dsr27pyjkmbyqms1"; depends=[digest GPArotation knitr psych xtable]; }; qmrparser = derive2 { name="qmrparser"; version="0.1.5"; sha256="0sl9n42j0dx9jqz5vv029ra6dyrg9v7mvdlya8ps3vyd6fjhwh0z"; depends=[]; }; + qoma_smuggler = derive2 { name="qoma.smuggler"; version="0.0.1"; sha256="03p9i0kr6i3adpb9lcszcmdr9p26nfy7f8hw2sbydazglaw4hscr"; depends=[lubridate rhli tibble]; }; qpcR = derive2 { name="qpcR"; version="1.4-1"; sha256="1r01q7jv3w59yx1gc0qw91rq7rvdhqsi8y57sqqkmwyqfw2x2vsv"; depends=[MASS Matrix minpack_lm rgl robustbase]; }; qqman = derive2 { name="qqman"; version="0.1.4"; sha256="1v9s9ag1hfb47py87wb2nad4mbsfx35832hdmrh5kxrb2f11zl1s"; depends=[calibrate]; }; - qqplotr = derive2 { name="qqplotr"; version="0.0.2"; sha256="1cfzs77labxsfqq3flqz40gihyaz4bsi9vhsx6qqgpl6v4iz0a2h"; depends=[dplyr ggplot2 knitr MASS robustbase]; }; + qqplotr = derive2 { name="qqplotr"; version="0.0.3"; sha256="0qijdgma702ryi0q2ii2sa04jpz12i8c7xnh9a9zngi9n630a0f2"; depends=[dplyr ggplot2 knitr MASS purrr rmarkdown robustbase]; }; qqtest = derive2 { name="qqtest"; version="1.1.1"; sha256="08vfpbrgvyhv1w0gqmys9zkhfxh85sk74ig5fn12ma2p87zv7r5l"; depends=[robust]; }; qqvases = derive2 { name="qqvases"; version="1.0.0"; sha256="1fli4v1slmnwcmzmmfw84sa4mx3xzv3im1q0plb8811sbsgmwdvl"; depends=[shiny shinythemes]; }; qrLMM = derive2 { name="qrLMM"; version="1.3"; sha256="1k85d09yvhx3pgmvqrsmhd14hqaah4pdr87vp4kg60dp9w5sydjz"; depends=[ald ghyp matrixcalc mvtnorm psych quantreg]; }; @@ -10074,14 +10508,15 @@ in with self; { qrcmNP = derive2 { name="qrcmNP"; version="0.1.2"; sha256="0psgnz2fdj530wjj14pv5x2889yzphnlsg10lry9i6dvmxd8m47k"; depends=[qrcm survival]; }; qrcode = derive2 { name="qrcode"; version="0.1.1"; sha256="12j0db8vidlgkp0dcjyrw5mhhvazl7v7gpn9wsf2m0qnz1rm4igq"; depends=[R_utils stringr]; }; qrencoder = derive2 { name="qrencoder"; version="0.1.0"; sha256="1lg60lg2fiqdw0m228i8pln2p0kqp9f21qmrx6r6rwxifvwlfhv8"; depends=[base64enc png raster Rcpp]; }; - qrjoint = derive2 { name="qrjoint"; version="1.0-0"; sha256="18jmxb5wv16gy4vf0cgp4x885s53i3z3qmc46bdr4md513mc980w"; depends=[coda kernlab Matrix quantreg]; }; + qrjoint = derive2 { name="qrjoint"; version="2.0-2"; sha256="1b8yxlq56z4xgy2k4da75j7gk3l1n6lcl0pzz7c9mx45296d200q"; depends=[coda kernlab Matrix quantreg]; }; qrmdata = derive2 { name="qrmdata"; version="2016-01-03-1"; sha256="192dcsmvl3xbzlk658cfp2sk5fkgbjhjd4g1mrcs8s63hmzbwdzc"; depends=[xts]; }; qrmix = derive2 { name="qrmix"; version="0.9.0"; sha256="1r695d9bmmngvblh9jj0rnjymdaln9w0jywz51wla0bdssssf845"; depends=[MASS quantreg]; }; qrmtools = derive2 { name="qrmtools"; version="0.0-9"; sha256="0q6hp6j4hcj17i1c1rf180rvjcjmka0zq4r89x2rb5cwrhgps99a"; depends=[lattice Quandl quantmod rugarch xts zoo]; }; qrng = derive2 { name="qrng"; version="0.0-5"; sha256="0ddwbbw5w7y8vns83z4dyh8inl976k2cg55rxbynaks8bdxr38mj"; depends=[]; }; qrnn = derive2 { name="qrnn"; version="2.0.3"; sha256="0lc1gj674ll168dbcb1wh0zxmvjaqfhfxg7p2zfpakq63qns442g"; depends=[]; }; qrsvm = derive2 { name="qrsvm"; version="0.2.1"; sha256="0qpj3c8qwrwr2asvp921av0mbdba1ayz0pdq4a52i1waqng4fgis"; depends=[doParallel foreach kernlab Matrix quadprog]; }; - qsort = derive2 { name="qsort"; version="0.2.1"; sha256="046imyjdbsakhf6i6p63xafb9dx7fcixbdqnkm34wrzzvyjvxh15"; depends=[cowplot ggplot2 gridExtra purrr]; }; + qsort = derive2 { name="qsort"; version="0.2.3"; sha256="1xvp29dijfa2207wyw3z09rmffn61fngfy0f00qjk284n1jnnvrg"; depends=[cowplot ggplot2 gridExtra purrr]; }; + qsub = derive2 { name="qsub"; version="1.0.3"; sha256="1ri9bmvqakp0r26mypi8nfpf9fvxkkp3cans8ara3s7wscygycxr"; depends=[dplyr glue processx purrr random readr ssh stringr tidyr]; }; qtbase = derive2 { name="qtbase"; version="1.0.14"; sha256="1pcgjycq61x9h52sqr6fz83qjnlpbawvpavnn9hyw2b7jlv3nwfd"; depends=[]; }; qte = derive2 { name="qte"; version="1.2.2"; sha256="0h4kffavw2ii765c4bvwg19nlzk1si8sw09iklwmmb6gdm2v5m81"; depends=[BMisc formula_tools ggplot2 Hmisc pbapply quantreg texreg]; }; qtl = derive2 { name="qtl"; version="1.42-8"; sha256="1l528dwvfpdlr05imrrm4rq32axp6hld9nqm6mm43kn5n7z2f5k6"; depends=[]; }; @@ -10094,6 +10529,7 @@ in with self; { qtlnet = derive2 { name="qtlnet"; version="1.4.4"; sha256="1r9r6wp71i36ffcdxiljvh2c8nva868x2dx6bkinbaq8cixww2cx"; depends=[graph igraph pcalg qtl sem]; }; qtpaint = derive2 { name="qtpaint"; version="0.9.1"; sha256="08x7qcxwkaclwv1p4s9a5k95x35hzp69whiihkakjv5blm83m3g9"; depends=[qtbase]; }; quad = derive2 { name="quad"; version="1.0"; sha256="0fak12l19f260k0ygh6zimx8dabzsv7a9i2njw8hnfcs3ndffhv5"; depends=[PearsonDS]; }; + quadmatrix = derive2 { name="quadmatrix"; version="0.1.0"; sha256="0nngrvvbalmrr6g9bq9f5qrllvwfq5p1b9yhs4zb098s3wga8jms"; depends=[geigen matrixcalc]; }; quadmesh = derive2 { name="quadmesh"; version="0.1.0"; sha256="1k1midhszmi843krv9sdwbyhjmffgps0xx9aigkp7yw7mpif07vx"; depends=[dplyr raster]; }; quadprog = derive2 { name="quadprog"; version="1.5-5"; sha256="0jg3r6abmhp8r9vkbhpx9ldjfw6vyl1m4c5vwlyjhk1mi03656fr"; depends=[]; }; quadprogXT = derive2 { name="quadprogXT"; version="0.0.3"; sha256="1pa494xpmxanbqcpylhhhm4bnsd1vkrixnmi2rg2bdw21x77hlmb"; depends=[quadprog]; }; @@ -10101,34 +10537,35 @@ in with self; { qualCI = derive2 { name="qualCI"; version="0.1"; sha256="09mzsy5ryyrn1gz9ahrh95cpfk7g09pmjjy0m82fh4xc7j5w6kpf"; depends=[combinat]; }; qualV = derive2 { name="qualV"; version="0.3-3"; sha256="1yyqk223ydcc0125gsn33a4mcdp8bd76fpn8kj9bfz9g78b8dqmx"; depends=[KernSmooth]; }; qualityTools = derive2 { name="qualityTools"; version="1.55"; sha256="1c2p78dhwqvzb2k01dvwb41a6hlr2iwpw6fv91036x30rphjzb88"; depends=[MASS Rsolnp]; }; + qualmap = derive2 { name="qualmap"; version="0.1.1"; sha256="1z085zyqxnizpx4y1891shhijs2a9gg5ap800ryvfxncg6gk35wa"; depends=[dplyr glue leaflet purrr rlang sf]; }; qualpalr = derive2 { name="qualpalr"; version="0.4.2"; sha256="0lgg8r7w2fwd2nw8x3k876pyc9r3igqri57akc5fwi92gb8grj5b"; depends=[assertthat randtoolbox Rcpp RcppArmadillo RcppParallel]; }; - qualtRics = derive2 { name="qualtRics"; version="3.0"; sha256="1cd49jvk04gx278v74yc93f4jni7k30v0anz95mz98x4y3xr45nd"; depends=[assertthat dplyr httr jsonlite readr rlang sjlabelled stringr yaml]; }; qualvar = derive2 { name="qualvar"; version="0.2.0"; sha256="1c7b7lcyq2l46sslk185r6xfh5fb35z9qihrhnh294sw1k52bffa"; depends=[]; }; quantable = derive2 { name="quantable"; version="0.3.6"; sha256="15q4phc2j7aihl8f4qzpdwxcvshq2cfzkfcxc8k4qypsxk9a00sb"; depends=[caret dplyr e1071 ggplot2 ggrepel gplots Matrix plyr pROC RColorBrewer readr reshape2 rlang scales stringr tibble tidyr]; }; - quanteda = derive2 { name="quanteda"; version="1.3.0"; sha256="140xs8581l29p4zn26d9ijzpzcqpgf91l279vbagbpbsj3z8zqky"; depends=[data_table extrafont fastmatch ggplot2 ggrepel lubridate magrittr Matrix network Rcpp RcppArmadillo RcppParallel RSpectra sna SnowballC spacyr stopwords stringi xml2 yaml]; }; + quanteda = derive2 { name="quanteda"; version="1.3.4"; sha256="1m6qhkhdqrd3lvnxpy66klmi7bbkjgjfjp7y1m9cbjws27fgnspi"; depends=[data_table extrafont fastmatch ggplot2 ggrepel lubridate magrittr Matrix network Rcpp RcppArmadillo RcppParallel RSpectra sna SnowballC spacyr stopwords stringi xml2 yaml]; }; quantification = derive2 { name="quantification"; version="0.2.0"; sha256="116cp88q9cmizxc2a8lsysa1vwyp1y86457fx5qkq5dcm4g721g8"; depends=[car]; }; quantileDA = derive2 { name="quantileDA"; version="1.1"; sha256="0jbklxsy33j7clcw97qq4ijwkrb94v2m11gjcfa38vplfxm9913q"; depends=[]; }; + quantities = derive2 { name="quantities"; version="0.1.1"; sha256="0yi9p0d7k07mfhvl1fhlrzslwmfcj9aaxxj97xdlwvd0kb9qs41j"; depends=[errors Rcpp units]; }; quantmod = derive2 { name="quantmod"; version="0.4-13"; sha256="16aldg96z7amp5mr90nb8127yy04gxsihfr26km5p3cx3j117yv0"; depends=[curl TTR xts zoo]; }; quantoptr = derive2 { name="quantoptr"; version="0.1.3"; sha256="0f9vy9yhya4wpya8n345s6n7a5sb29chdkl5fz6dwa31lp1mvvj3"; depends=[quantreg Rdpack rgenoud stringr]; }; quantreg = derive2 { name="quantreg"; version="5.36"; sha256="023gdzahxp582rpabilpxbl3wyjrgjjnnrhcv9xhrqdfiq5l2yza"; depends=[Matrix MatrixModels SparseM]; }; quantreg_nonpar = derive2 { name="quantreg.nonpar"; version="1.0"; sha256="1f9120awnkwsgdiqg98lg7xs5l4y80930869x6k9q76595r5m92k"; depends=[fda mnormt quantreg Rearrangement]; }; quantregForest = derive2 { name="quantregForest"; version="1.3-7"; sha256="0lk7r02i6zpx9sdl2rp0r7fc3a84s8qhg49nh2x7k3vxwa095pjz"; depends=[randomForest RColorBrewer]; }; - quantregGrowth = derive2 { name="quantregGrowth"; version="0.4-2"; sha256="0g8jlgxivsg788g73ji7vckc6hgncsjkpyc0l8awcpaxi7i3a98l"; depends=[quantreg]; }; + quantregGrowth = derive2 { name="quantregGrowth"; version="0.4-3"; sha256="0q2yk51hcn7jnvh14nxa7szfj4pr9grh5rdfwazaziilbwqdmw4f"; depends=[quantreg]; }; quantregRanger = derive2 { name="quantregRanger"; version="1.0"; sha256="1a9q2prr790bpw6s0y5ni5ppd3vqkjr0v4nqp6ywcj5n3sk69pvx"; depends=[ranger Rcpp]; }; quantspec = derive2 { name="quantspec"; version="1.2-1"; sha256="0kvwifdwy3big0lls5h3wcb48v3jvlfp1l0zjd07jnvj43zj3ysd"; depends=[abind quantreg Rcpp snowfall zoo]; }; quarrint = derive2 { name="quarrint"; version="1.0.0"; sha256="13fdmmrgn23xd9vpywmcl7pf729gmcxjfl1wxs30axsbp4h1s6rk"; depends=[neuralnet]; }; - questionr = derive2 { name="questionr"; version="0.6.2"; sha256="0mjgwm6xm753r6bjlz79c9vp7xxkb69hiv3mlzrm50slh34x7jhx"; depends=[classInt highr htmltools labelled miniUI rstudioapi shiny]; }; - queuecomputer = derive2 { name="queuecomputer"; version="0.8.2"; sha256="0zpyi4hqhsy2jlbf2ygfl25wh3m166ifp9yw4h4ycd1pga9bj43n"; depends=[dplyr Rcpp RcppArmadillo tidyr]; }; + questionr = derive2 { name="questionr"; version="0.6.3"; sha256="1vak9wlhdgdc1vh8g87ha3gjcnx6kpl67wpsxnpvkgxai6qd8fb9"; depends=[classInt highr htmltools labelled miniUI rstudioapi shiny]; }; + queuecomputer = derive2 { name="queuecomputer"; version="0.8.3"; sha256="0ravk2bxzq3zhk6mmh6iv11ql3bkpp2318vvrl39ghm5bh6pp6mg"; depends=[dplyr Rcpp RcppArmadillo tidyr]; }; queueing = derive2 { name="queueing"; version="0.2.11"; sha256="1rgavpivvxwww1qiphbjm25d1avhjcjv31imsrzrkwh1d12b2k7x"; depends=[]; }; quhomology = derive2 { name="quhomology"; version="1.1.1"; sha256="0wiih00zk4682wy1r4nyifh76h5bnvl3f785wjzmrwylnfy951l3"; depends=[MASS numbers]; }; - quickPlot = derive2 { name="quickPlot"; version="0.1.4"; sha256="13g86gdfidkvp70w4gscp81c4vzbhbl7b47a7knw4h7hswsb9a1p"; depends=[data_table fpCompare ggplot2 gridBase igraph raster RColorBrewer rgdal rgeos sp]; }; + quickPlot = derive2 { name="quickPlot"; version="0.1.5"; sha256="0jqfshwb7ykrz5xi0gfp80fs81yv6mfc0vhbgkbzn7kcjfkcydac"; depends=[data_table fpCompare ggplot2 gridBase igraph raster RColorBrewer rgdal rgeos sp]; }; quickReg = derive2 { name="quickReg"; version="1.5.0"; sha256="1l1v3k8albxlaz18l2b2x2ryifq4pbdq6n4q7555hnfcik9rqmw5"; depends=[dplyr ggplot2 nortest psych rlang survival]; }; - quickblock = derive2 { name="quickblock"; version="0.1.0"; sha256="15zv7znhq3rl5jkdy0jyxr0h2mkpxir04vvl2hw57c5mn79izcpr"; depends=[distances scclust]; }; + quickblock = derive2 { name="quickblock"; version="0.2.0"; sha256="0ij4ivpnkjzdixbq7pg4g1xkb031qawadr22qhzp0q210qhmhc0m"; depends=[distances scclust]; }; quickmapr = derive2 { name="quickmapr"; version="0.3.0"; sha256="0962qm8ak0wpqld8nrb8rvvb78743zfrfsq2xrwdlql681j2nv8c"; depends=[httr raster rgdal rgeos sf sp]; }; - quickmatch = derive2 { name="quickmatch"; version="0.1.2"; sha256="03wnx6hifr4pmwm6fsxamcaf5ig59nfia9lyn6mzxplinfid71w6"; depends=[distances sandwich scclust]; }; + quickmatch = derive2 { name="quickmatch"; version="0.2.1"; sha256="1qfslhjlbjpzigz8n6b7w41g8pwdiwri091ivd5igp1xy5pv8a3w"; depends=[distances sandwich scclust]; }; quickpsy = derive2 { name="quickpsy"; version="0.1.5"; sha256="0r1xjcx02p0fsgfcd2h0dxcagzxxan405cjwh8sjdgi5p01jrym8"; depends=[DEoptim dplyr ggplot2 MPDiR]; }; quickregression = derive2 { name="quickregression"; version="0.2"; sha256="1z0sspi8q7dvgxqbj5na56v458pv6jhxrssnm6j23156dchgw39h"; depends=[car]; }; - quint = derive2 { name="quint"; version="1.2.1"; sha256="1d9dnrjnl9cg2yn5snr6x9qr6lf74639j3ymsxpw0wn5c4fm8z46"; depends=[Formula partykit rpart]; }; + quint = derive2 { name="quint"; version="2.0.0"; sha256="10jcpabsk7bdw7cvq21z0hsrp4gnlbf35iypc2gprrbkk8sw4i8i"; depends=[Formula partykit rpart]; }; quokar = derive2 { name="quokar"; version="0.1.0"; sha256="1qnl3x1aa665xpyb3ac07xrnnjdwbmj645p103144k5is5b8likc"; depends=[ald ALDqr bayesQR dplyr ggplot2 GIGrvg gridExtra knitr magrittr MCMCpack purrr quantreg robustbase tidyr]; }; quotedargs = derive2 { name="quotedargs"; version="0.1.2"; sha256="034fhfmfq62yf7akx2i0bim70jq9azkk2h28k79lwax7ysydsjnj"; depends=[]; }; qut = derive2 { name="qut"; version="2.1"; sha256="1wkk4c4f10a1whrspr5yalp7flcxckzxlx187ymmpnz7qcncz619"; depends=[flare glmnet lars Matrix]; }; @@ -10140,7 +10577,9 @@ in with self; { r2dRue = derive2 { name="r2dRue"; version="1.0.4"; sha256="1apdq7zj5fhs349wm9g6y06nn33x24pg3gdp4z1frd18qlacf8z5"; depends=[matrixStats rgdal sp]; }; r2glmm = derive2 { name="r2glmm"; version="0.1.2"; sha256="0iim92blpa59vgz97c2pi05yhbjjmaffdbkbmk5kplfb2vmazgiy"; depends=[afex data_table dplyr ggplot2 gridExtra lmerTest MASS Matrix mgcv pbkrtest]; }; r2stl = derive2 { name="r2stl"; version="1.0.0"; sha256="18lvnxr40cm450s8qh09c3cnkl1hg83jhmv1gzsv6nkjrq4mj5wh"; depends=[]; }; + r4lineups = derive2 { name="r4lineups"; version="0.1.1"; sha256="1p0dnrp21zx1l9lqx01jnq54d5ppb8siibv47i4gsp7c7db9ymxc"; depends=[boot dplyr ggplot2 ggrepel here magick magrittr pROC psych purrr]; }; r4ss = derive2 { name="r4ss"; version="1.24.0"; sha256="1kifzfg2zx6lq2c8qqbhb096z1wgdayhg5qzx5hnkwpn05w5cma3"; depends=[coda corpcor gplots gtools maps pso truncnorm]; }; + r511 = derive2 { name="r511"; version="0.1.1"; sha256="1njsnjf0746cv6x7fznq4cg556fczqcfawwb869r3w9zv0zj1iy9"; depends=[assertthat dplyr httr tibble xml2]; }; r6extended = derive2 { name="r6extended"; version="0.1.1"; sha256="184c3jh84vihbwg81c2wv3ndaddki8cpas3wgvqk2akyq168rnfc"; depends=[digest hellno magrittr R6]; }; rARPACK = derive2 { name="rARPACK"; version="0.11-0"; sha256="12h2y46xcfldhjdmm960swgn9b23zvkj5vg2bi42s9qxwgi02d63"; depends=[RSpectra]; }; rAltmetric = derive2 { name="rAltmetric"; version="0.7.0"; sha256="1vbvjv273vg3pi30vxxa2bivlajfsbqrzflk3payp6ym9myi27mg"; depends=[httr jsonlite rlist]; }; @@ -10166,12 +10605,13 @@ in with self; { rFDSN = derive2 { name="rFDSN"; version="0.0.0"; sha256="1ffiqpdzy4ipy2aci22zkih4373ifkjkpvsrza8awhyf9fwqwdsl"; depends=[XML]; }; rFSA = derive2 { name="rFSA"; version="0.9.1"; sha256="14qpxmzy4vy1fydn8yqh1001mqrgv1i67ai42w61dkk0d4m75z60"; depends=[hashmap tibble]; }; rFTRLProximal = derive2 { name="rFTRLProximal"; version="1.0.0"; sha256="1458gqy2zbaa62vaimawdr1nk0lsgwz1j4pgw21fkw7bskcszz0f"; depends=[data_table FeatureHashing foreach magrittr Matrix Rcpp RcppArmadillo RcppProgress]; }; - rFerns = derive2 { name="rFerns"; version="2.0.3"; sha256="02lq43mgcz8n21hwb0pjqi0aq5dacnaakpx336q1xzw1kwlvfkhv"; depends=[]; }; + rFerns = derive2 { name="rFerns"; version="3.0.0"; sha256="0z12201y1b9d3rd02k4y64hpnlrgkg7pi1jpzsh1br4pchdf7rrm"; depends=[]; }; rGammaGamma = derive2 { name="rGammaGamma"; version="1.0.12"; sha256="1051ah6q11qkxj1my4xybbzc8xcqkxfmps8mv2his5cyfllwidbs"; depends=[gsl]; }; rGoodData = derive2 { name="rGoodData"; version="0.1.1"; sha256="092sgy6y3dkyr32hrir4jvjwh7n6gfvv9z7i631fipg59255g0zy"; depends=[data_table httr jsonlite]; }; rGroovy = derive2 { name="rGroovy"; version="1.3"; sha256="172vm4diygzi4ipmw8bl03k0x3aps0h1vkvwvw539kamy7xb5w98"; depends=[rJava]; }; rHealthDataGov = derive2 { name="rHealthDataGov"; version="1.0.1"; sha256="0lkjprss15yl6n9wgh79r4clip3jndly2ab1lv4iijzxnxay099d"; depends=[bit64 httr jsonlite]; }; rHpcc = derive2 { name="rHpcc"; version="1.0"; sha256="0096z90mmf1j2xpb9034a5ph52m8z6n6xjh3km2vrhw63g3cpwap"; depends=[RCurl XML]; }; + rIP = derive2 { name="rIP"; version="0.1.1"; sha256="0fmn48zfp7pkjza6a4dl7hpm2addijxk9990fw845q0awdd181ax"; depends=[httr]; }; rIsing = derive2 { name="rIsing"; version="0.1.0"; sha256="1208lwfk9j8gghj8xf6i8v6s18h89ydqsd4jq3r88n403yzbzzck"; depends=[data_table Rcpp RcppEigen]; }; rJPSGCS = derive2 { name="rJPSGCS"; version="0.2-10"; sha256="0a00s10yp22fkvk67dkq43sbphcqla65x9j4qpv076bmdchn7arw"; depends=[chopsticks rJava]; }; rJava = derive2 { name="rJava"; version="0.9-10"; sha256="0y7yg70i3zwbwl4g36js4dqpl51cmwss5ymrsk24d1z07bflp4y9"; depends=[]; }; @@ -10180,17 +10620,18 @@ in with self; { rLDCP = derive2 { name="rLDCP"; version="1.0.2"; sha256="0k7zc1xyqmcl7070hhpqw1d2k1ij6bd4wjym8cw263pds2n7nx21"; depends=[XML]; }; rLTP = derive2 { name="rLTP"; version="0.1.4"; sha256="04w432m03xwh0szshsrfw5h7wy43q4lj8z0y07k8w6gsf27cy5bx"; depends=[RCurl]; }; rLakeAnalyzer = derive2 { name="rLakeAnalyzer"; version="1.11.4"; sha256="1fvln3r2zkzhsck53jppchg795qbjbzw0rd688h89if1lkiy51w6"; depends=[plyr]; }; + rLandsat = derive2 { name="rLandsat"; version="0.1.0"; sha256="0j6p0ba76vhzg69frdf4ykiyc8vy0axd4jw26b72j8pl9rdwnn01"; depends=[dplyr httr jsonlite RCurl readr stringr svMisc]; }; rLiDAR = derive2 { name="rLiDAR"; version="0.1.1"; sha256="1w0yi4ygw0l9ydbllqjylp30d401bsf7b6fng6qg3pssbi9v3kln"; depends=[bitops deldir geometry plyr raster rgl sp spatstat]; }; rLindo = derive2 { name="rLindo"; version="8.0.1"; sha256="05qyc4wvpjgw8jxmwn2nwybi695fjn0cdilkprwmjg07c82f0q5n"; depends=[]; }; rMEA = derive2 { name="rMEA"; version="1.0.0"; sha256="1cxcf2ji2f3kkjlj6lym7zfpmgbbjw7al67dldy2kn9dk2dn087z"; depends=[]; }; rMR = derive2 { name="rMR"; version="1.1.0"; sha256="0da1hclfnnlkp9by6zf2p079643p8nimplr9p3ipbjdy739j344z"; depends=[biglm]; }; rMouse = derive2 { name="rMouse"; version="0.1"; sha256="0pzxasap5kwxqq36mb4zi139jllsl4vk06dw2pv9xnwdxiszr3gp"; depends=[rJava]; }; rNMF = derive2 { name="rNMF"; version="0.5.0"; sha256="1nz6h0j5ywdh48m0swmhp34hbkycd7n13rclrxaw85qi9wc42597"; depends=[knitr nnls]; }; - rNOMADS = derive2 { name="rNOMADS"; version="2.3.9"; sha256="15l6150vsaa7y2wv896mhdbakxdsg87fx74bbj0rsn0757jss525"; depends=[fields GEOmap MBA RCurl rvest scrapeR stringr XML xml2]; }; + rNOMADS = derive2 { name="rNOMADS"; version="2.3.10"; sha256="1pbbrx91fq5gpjhf6rqyhl9isj3mz3prbh5g5sfg7y63hhn817z0"; depends=[fields GEOmap MBA RCurl rvest scrapeR stringr uuid XML xml2]; }; rODE = derive2 { name="rODE"; version="0.99.6"; sha256="0l518ghfw6283kckqcbh45a35vd73njy05v3dwghhhjdj7v3km8b"; depends=[data_table]; }; rPackedBar = derive2 { name="rPackedBar"; version="0.1.0"; sha256="12jwkch3264m6ksl8rdjirwdzm1g8b4050mm6rysw9v57k3v57ji"; depends=[data_table plotly scales]; }; rPowerSampleSize = derive2 { name="rPowerSampleSize"; version="1.0.2"; sha256="1insdfvcn1pirsnf7nwfia0kzgsmh2zpghgfj2yc35ld1r9j2hp2"; depends=[mvtnorm ssanv]; }; - rPraat = derive2 { name="rPraat"; version="1.0.8"; sha256="06f97sa43i0b4x8j48higgx5jyj5q73j6mf2730yfm4db6ahz94m"; depends=[dplyr dygraphs readr stringr]; }; + rPraat = derive2 { name="rPraat"; version="1.1.2"; sha256="1fvawmpv3zxd1gjcal69j5biga1mcd956kr52x0azqprhqdk6r52"; depends=[dplyr dygraphs readr stringr]; }; rPref = derive2 { name="rPref"; version="1.2"; sha256="19b6rycz73rz3nxymb52gfddqsxprkxazwa8pb75vckk13q1cmj0"; depends=[dplyr igraph lazyeval Rcpp RcppParallel]; }; rPython = derive2 { name="rPython"; version="0.0-6"; sha256="1aw9jn45mw891cskr51yil60i55xv5x6akjvfdsbb9nwgdwwrqdp"; depends=[RJSONIO]; }; rRAP = derive2 { name="rRAP"; version="1.1"; sha256="1nzvs8bjkbjraa33azxf9mrxsxh87qhh3qlldrcs5y4fq4ancyqb"; depends=[lars lassoshooting MASS]; }; @@ -10201,30 +10642,34 @@ in with self; { rSymPy = derive2 { name="rSymPy"; version="0.2-1.1"; sha256="1mrfpyalrq8b6yicy28jsj0xy7hlawa72imsfhabwd3hrx6ld150"; depends=[rJython]; }; rTableICC = derive2 { name="rTableICC"; version="1.0.7"; sha256="1z896675kmm9p5dnmcnsz2205ynf05laqcxvlc9y0g5i0x8rf8v6"; depends=[aster partitions]; }; rTensor = derive2 { name="rTensor"; version="1.3"; sha256="0ra34sn4g92r6asrn4la2wbsi2y0hnyx163wwi4v0j6f57bslhdw"; depends=[]; }; + rTephra = derive2 { name="rTephra"; version="0.1"; sha256="045f2sp2j4hiwa9k1vs6cxr59x1yr34jq1z2crasxflsxbwa3xz8"; depends=[]; }; rUnemploymentData = derive2 { name="rUnemploymentData"; version="1.1.0"; sha256="0p5hba8iv060szp23s05hvpmwan518ykakm6vqzdcki0inxw0hyv"; depends=[choroplethr rvest stringr]; }; rWBclimate = derive2 { name="rWBclimate"; version="0.1.3"; sha256="0vs56hx7a85pw4jx8nb8bdlr9dbkl4zdhzhqsm0505xc3qz18vxh"; depends=[ggplot2 httr jsonlite plyr reshape2 rgdal sp]; }; - rWind = derive2 { name="rWind"; version="1.0.2"; sha256="0w109l3hibl1w0g2qj2rqm59qfs9zbry5q8azii86mqpgwxk7zln"; depends=[gdistance lubridate Matrix raster]; }; - rWishart = derive2 { name="rWishart"; version="0.1.0"; sha256="1kg2n8lyfdp76fw36m13rlb0qy1ffk8n701ffmf5dgkfp0x8nnn7"; depends=[lazyeval MASS Matrix]; }; + rWind = derive2 { name="rWind"; version="1.0.3"; sha256="04b3yz0x07j2fvq0gzmvl071wwnkhzx4wfr7xpdss2nq8vjwxjaj"; depends=[gdistance lubridate Matrix raster]; }; + rWishart = derive2 { name="rWishart"; version="0.1.1"; sha256="1zv35l2nvwwidx5zxfh7a4jgiaq2mqk69xf974994k1ksfvibkmi"; depends=[lazyeval MASS Matrix]; }; rYoutheria = derive2 { name="rYoutheria"; version="1.0.3"; sha256="1r63ggy4knwzxnpjkmsn7zwmwfaznm8mmxl7r9ph10wz4sblgygl"; depends=[plyr RCurl reshape2 RJSONIO]; }; rabi = derive2 { name="rabi"; version="0.1.0"; sha256="02ldpkqpdvh0b660j34bppw5j9pl3a2b4vkzaaiq4kcangahg2r6"; depends=[numbers polynom stringdist]; }; race = derive2 { name="race"; version="0.1.59"; sha256="13jprlnngribgvyr7fbg9d36i8qf3cax85n71dl71iv0y24al1cy"; depends=[]; }; radar = derive2 { name="radar"; version="1.0.0"; sha256="1wh5j3cfbj01jx2kbm9ca5cqhbb0vw7ifjn426bllm4lbbd8l273"; depends=[]; }; radarchart = derive2 { name="radarchart"; version="0.3.1"; sha256="0gcxnbgj8ja1m4wzhbjy67m6zphf0c5ni9yx7sr7f0abm03ry753"; depends=[htmltools htmlwidgets]; }; - radiant = derive2 { name="radiant"; version="0.9.5"; sha256="0a5dvmvnvn2jd53grvagbxw6lb4mp3l809911dlh2rr4b9z9nkyx"; depends=[AlgDesign psych r_import radiant_basics radiant_data radiant_design radiant_model radiant_multivariate rstudioapi shiny]; }; - radiant_basics = derive2 { name="radiant.basics"; version="0.9.5"; sha256="0xwsgi4nr9i7wi699cgmfdyb7nxf98af4vgl56i1bbnxl8k0bnxz"; depends=[dplyr ggplot2 gridExtra magrittr psych r_import radiant_data rstudioapi scales shiny tidyr]; }; - radiant_data = derive2 { name="radiant.data"; version="0.9.5"; sha256="0mbxfqn79nphii4hb6kxl2wc0w0ra16y378rp2yw9a9926zdb7mb"; depends=[base64enc broom car curl dplyr DT ggplot2 glue gridExtra jsonlite knitr lubridate magrittr markdown plotly psych r_import readr readxl rlang rmarkdown rstudioapi scales shiny shinyAce tibble tidyr writexl]; }; - radiant_design = derive2 { name="radiant.design"; version="0.9.5"; sha256="1lqim49ifw019aqfrz2pqa81yn2kg5hixn3ywd5hfj670n5sd5hr"; depends=[AlgDesign dplyr mvtnorm polycor r_import radiant_data rstudioapi shiny]; }; - radiant_model = derive2 { name="radiant.model"; version="0.9.5"; sha256="1r1gz8hlrihadzz4x73ccrxqkz744lbr8h29fa77ghkiy9y55abq"; depends=[car data_tree DiagrammeR dplyr e1071 ggplot2 gridExtra lubridate magrittr NeuralNetTools nnet psych r_import radiant_basics radiant_data rlang rpart rstudioapi sandwich shiny stringr tidyr yaml]; }; - radiant_multivariate = derive2 { name="radiant.multivariate"; version="0.9.5"; sha256="1rpk757r80l38y0y4w94h363xdmrv7mp6qpnwpcbrza20w9dhqvs"; depends=[car dplyr ggplot2 ggrepel Gmedian GPArotation gridExtra magrittr MASS psych r_import radiant_data radiant_model rlang rstudioapi scales shiny]; }; + radiant = derive2 { name="radiant"; version="0.9.7"; sha256="0vmiypmabimnxdh692x4f2fbv32fmb8rhn5hvf60sk5qzzp0hla3"; depends=[r_import radiant_basics radiant_data radiant_design radiant_model radiant_multivariate shiny]; }; + radiant_basics = derive2 { name="radiant.basics"; version="0.9.7"; sha256="1lyishpzy51yyi5wqcxxyl1vz16i28fkkg9828f5z6ak109y2mn8"; depends=[dplyr ggplot2 gridExtra magrittr psych r_import radiant_data scales shiny tidyr]; }; + radiant_data = derive2 { name="radiant.data"; version="0.9.7"; sha256="1f98ahki0kyb27gl55a859zb0lsvk9gddd9f54y767xfs6h89cgk"; depends=[base64enc broom car curl dplyr DT ggplot2 glue gridExtra jsonlite knitr lubridate magrittr markdown plotly psych r_import readr readxl rlang rmarkdown rstudioapi scales shiny shinyAce shinyFiles summarytools tibble tidyr writexl]; }; + radiant_design = derive2 { name="radiant.design"; version="0.9.7"; sha256="1qfridr70s22agjaiv2522v24pnf4jrk4dad46ghdzzj79s3kqvj"; depends=[AlgDesign dplyr mvtnorm polycor r_import radiant_data shiny]; }; + radiant_model = derive2 { name="radiant.model"; version="0.9.7"; sha256="18xrvgc3f58m26vng4m9ayn49vf7yb3r1p3nwbhszih5m9sfgxx2"; depends=[car data_tree DiagrammeR dplyr e1071 ggplot2 gridExtra lubridate magrittr NeuralNetTools nnet psych r_import radiant_basics radiant_data rlang rpart sandwich shiny stringr tidyr yaml]; }; + radiant_multivariate = derive2 { name="radiant.multivariate"; version="0.9.7"; sha256="1p7857h0p8l828hngb0l4qswjifdisi9ya0yxmn9wry50ids9rgf"; depends=[car dplyr ggplot2 ggrepel Gmedian GPArotation gridExtra magrittr MASS psych r_import radiant_data radiant_model rlang scales shiny]; }; radiomics = derive2 { name="radiomics"; version="0.1.3"; sha256="1ra94yaqw88slznhyv70kbfricxi44m4pnx1zh4ijghm491rphr5"; depends=[Rcpp reshape2 spatstat]; }; radir = derive2 { name="radir"; version="1.0.3"; sha256="0v1w0jy19fqscwkggyjashb6n9r6xjc0d971zw0lqnh1ap3chg0y"; depends=[hermite]; }; + radix = derive2 { name="radix"; version="0.5"; sha256="18sjhkrqsdr03sjpdh0crd83r8rk8q3p2saabasbkkbvprh6b769"; depends=[base64enc digest downloader htmltools jsonlite knitr lubridate mime png progress rmarkdown rprojroot rstudioapi stringr whisker xml2 yaml]; }; + radjust = derive2 { name="radjust"; version="0.1.0"; sha256="0krryhqid16a6jfb007n0k6rc8r7c808h859a9pjid2jbkg0bm7l"; depends=[]; }; radmixture = derive2 { name="radmixture"; version="0.0.1"; sha256="0rs60xjd43lg5c9972qhpg6bsqfg2578qvrz7gz3bdip10jb1ryj"; depends=[magrittr MCMCpack plyr quadprog]; }; + radtools = derive2 { name="radtools"; version="1.0.0"; sha256="0xspd3spfr59nciddx4gmfrw52jr0m0gznqb5rjsarshn9y8x3xf"; depends=[dplyr Hmisc magrittr oro_dicom oro_nifti]; }; rafalib = derive2 { name="rafalib"; version="1.0.0"; sha256="1dmxjl66bfdgrybhwyaa8d4i460liqcdw8b29a6w7shgksh29m0k"; depends=[RColorBrewer]; }; rags2ridges = derive2 { name="rags2ridges"; version="2.2"; sha256="04f9gvwpgrx54dgbjjixlxa2056aqcz2kryn4jplwf5fc0vj1lyn"; depends=[expm fdrtool ggplot2 graph gRbase Hmisc igraph RBGL Rcpp RcppArmadillo reshape sfsmisc snowfall]; }; ragt2ridges = derive2 { name="ragt2ridges"; version="0.3.1"; sha256="0zjqrvy1k1lz4caakcj3c6l2j637wp6nxbzfj0gvcn2c4pjcrdyp"; depends=[abind expm fdrtool igraph MASS Matrix mvtnorm rags2ridges Rcpp RcppArmadillo]; }; ragtop = derive2 { name="ragtop"; version="0.5"; sha256="0h09h9ws9c2d9xc00w4hl000h0kbvq16lz4vgv1w93am8zmsp4wm"; depends=[futile_logger limSolve]; }; railtrails = derive2 { name="railtrails"; version="0.1.1"; sha256="1hi55rcxmr7k3na3rpjqmd5fpgn51bymrp7yxmw45ff7mlzpa5h6"; depends=[tibble]; }; - rainbow = derive2 { name="rainbow"; version="3.4"; sha256="09vxdb4j099grnlx10995b74r3h9g1vs8div3nywgnslaj8x7pay"; depends=[cluster colorspace hdrcde ks MASS pcaPP]; }; + rainbow = derive2 { name="rainbow"; version="3.5"; sha256="1gcaflb3haw9wpx4wl64vgi30jxn2nrzlm5125hhg647rw7ryp8k"; depends=[cluster colorspace hdrcde ks MASS pcaPP]; }; raincpc = derive2 { name="raincpc"; version="0.4"; sha256="0yzpyidvf24frf82pj7rarjh0ncm5dhm0mmpsf2ycqlvp0qld10i"; depends=[SDMTools]; }; rainfreq = derive2 { name="rainfreq"; version="0.3"; sha256="0985ck2bglg22gfj7m0hc7kpk0apljsbssf1ci99mgk47yi8fk9v"; depends=[RCurl SDMTools]; }; rakeR = derive2 { name="rakeR"; version="0.2.1"; sha256="0cd89q6k0y9z1qk9k06iw56lhj4c52ckr0g4qv6q95lkyrbi3qg8"; depends=[ipfp wrswoR]; }; @@ -10241,7 +10686,7 @@ in with self; { random_polychor_pa = derive2 { name="random.polychor.pa"; version="1.1.4-2"; sha256="1ybwfn3hdwisxjn85vqrib1zhk8dcddbarbwjdf1vn27ih3c4h2c"; depends=[boot MASS mvtnorm nFactors psych sfsmisc]; }; randomForest = derive2 { name="randomForest"; version="4.6-14"; sha256="0kbmm0l42fc2d1rdq0l7k09d34kd87q4lx651ffsic4y84h8kf7l"; depends=[]; }; randomForestExplainer = derive2 { name="randomForestExplainer"; version="0.9"; sha256="0gqqm3784krl6xdx7j6xvvyi2rjbyi6c8shm44yvq59is5i7fypc"; depends=[data_table dplyr DT dtplyr GGally ggplot2 ggrepel MASS randomForest reshape2 rmarkdown]; }; - randomForestSRC = derive2 { name="randomForestSRC"; version="2.6.1"; sha256="0wmqy1m04iknqzfajhfcb6cjpl9h35x13ihsdx91l1d1yki7yq71"; depends=[]; }; + randomForestSRC = derive2 { name="randomForestSRC"; version="2.7.0"; sha256="12wqjch4mddb9gqcacihcvlrdj697yr2sjr3pmrf7xm3yws2gjrb"; depends=[]; }; randomGLM = derive2 { name="randomGLM"; version="1.02-1"; sha256="031338zxy6vqak8ibl2as0l37pa6qndln0g3i9gi4s6cvbdw3xrv"; depends=[doParallel foreach MASS]; }; randomLCA = derive2 { name="randomLCA"; version="1.0-15"; sha256="10rx2ah50dcjxz5y492c59d3pn0dvlgjaxfdf8sknkf6s4pmwkis"; depends=[boot fastGHQuad lattice Matrix]; }; randomNames = derive2 { name="randomNames"; version="1.0-0.0"; sha256="12q5bs65qivddiaxbsp128j94h2vyrgjvmm80d52r36ffbaigl09"; depends=[data_table]; }; @@ -10250,7 +10695,7 @@ in with self; { randomizationInference = derive2 { name="randomizationInference"; version="1.0.3"; sha256="0x36r9bjmpx90fz47cha4hbas4b31mpnbd8ziw2wld4580jkd6mk"; depends=[matrixStats permute]; }; randomizeBE = derive2 { name="randomizeBE"; version="0.3-4"; sha256="1x1lh1rrw7ma2wls0dflz18lk9h0qdy9gb11af95hqpabqc85rd7"; depends=[]; }; randomizeR = derive2 { name="randomizeR"; version="1.4.2"; sha256="0jv0mc40cy4w17jrsb2023l7k7cnzl9czdigl4shq9nx67mccdwx"; depends=[ggplot2 plotrix]; }; - randomizr = derive2 { name="randomizr"; version="0.16.0"; sha256="0lsba2nzzx8vnkyj8fzf9lfnkq743qdzir9f15pk23xycjzlncfs"; depends=[]; }; + randomizr = derive2 { name="randomizr"; version="0.16.1"; sha256="1jj04wvn7qrqpvag4ri9fqkw9815kyxhlcqn2f1m0bb94d5ngwzq"; depends=[]; }; randomsearch = derive2 { name="randomsearch"; version="0.1.0"; sha256="176grqp6rv4hiyzr9fzx2zz360h5nkrw39gidclgmrp7ckn5qs4v"; depends=[checkmate fs parallelMap ParamHelpers smoof]; }; randquotes = derive2 { name="randquotes"; version="0.1.0"; sha256="1rpcmxkpq8lgfzrjaipf5x573gm6rc31c9fafghiy99c0iphf46w"; depends=[curl jsonlite xml2]; }; randstr = derive2 { name="randstr"; version="0.2.0"; sha256="17593lbk6r089yasafd21i3v90ya9n92rflpzl0qicd2kqqk2gdh"; depends=[random stringi truncnorm]; }; @@ -10258,59 +10703,64 @@ in with self; { randtoolbox = derive2 { name="randtoolbox"; version="1.17.1"; sha256="13akf13qi4yhj9gapym05074b1qzk03vgysy81qsd73pd8r107ls"; depends=[rngWELL]; }; rangeBuilder = derive2 { name="rangeBuilder"; version="1.4"; sha256="1jjy1d3kljysm3mqgdszdi6incbmg2di63akxswfaiqcp1m68a6y"; depends=[alphahull cleangeo pbapply raster Rcpp rgdal rgeos sp stringi]; }; rangeMapper = derive2 { name="rangeMapper"; version="0.3-4"; sha256="0qrcxbh8saflqjmaa18fcyk5cqk6h4rz92zhqckswyqynx6m0cps"; depends=[classInt data_table foreach ggplot2 gridExtra lattice magrittr maptools raster RColorBrewer rgdal rgeos RSQLite sp]; }; + rangeModelMetadata = derive2 { name="rangeModelMetadata"; version="0.1.0"; sha256="0v0hn46s99hidfp0ln28hffyk3mzydxvqslkyif32zcdj0fxmc7l"; depends=[biomod2 dismo dplyr ecospat ENMeval googlesheets jsonlite MASS raster rgdal rgeos shiny sp spatstat spocc]; }; + rangemodelR = derive2 { name="rangemodelR"; version="1.0.3"; sha256="16pzmiazmfw14xvrlg0k9j15zrmz034hya41zl5z411d8rn0mqva"; depends=[]; }; ranger = derive2 { name="ranger"; version="0.10.1"; sha256="12z67xkgdmr5cflpd6cln0mn5xxajanqbfwlckv6cfma0gvf2z1j"; depends=[Matrix Rcpp RcppEigen]; }; rankFD = derive2 { name="rankFD"; version="0.0.1"; sha256="1zb9gxvsmv46mpw5znskhfjxnwkr59hdixcly6i3r78yaqgca0dz"; depends=[coin lattice MASS Matrix]; }; rankdist = derive2 { name="rankdist"; version="1.1.3"; sha256="1hdafy2zzn7hwl1lx5jksgi974zjn49dwih5s2zdyv4nnmmai003"; depends=[hash optimx permute Rcpp]; }; rankhazard = derive2 { name="rankhazard"; version="1.1.0"; sha256="0kljn9b74alrd22b5pwfnamdbaqi2wa2z6yzpmgpfs3x0hv72fw7"; depends=[survival]; }; rapiclient = derive2 { name="rapiclient"; version="0.1.2"; sha256="072rlr7z9rj4agkzmy12cz4axh4pajavfd83lpcx2b1lgxpj6ck4"; depends=[httr jsonlite]; }; - rapidjsonr = derive2 { name="rapidjsonr"; version="1.0.0"; sha256="064xqvyv83vl188rk18kgi4iaqq299d2y6fr24dk9lndpc4509kc"; depends=[]; }; + rapidjsonr = derive2 { name="rapidjsonr"; version="1.1"; sha256="0h4phjjhykbb45rg5b1xn48vqxdcvcngbm0416ds8in7j469wbwd"; depends=[]; }; rapidraker = derive2 { name="rapidraker"; version="0.1.0"; sha256="17jzkzm5hvd8vcqql40bwl89sfgz8yicvi0753nzgkmbvanzjhjx"; depends=[openNLPdata rJava slowraker]; }; rappdirs = derive2 { name="rappdirs"; version="0.3.1"; sha256="0ji6sg3bdn5gazkq14xmmcq7jnbsyxw4lzmmbgv6526j2vn93n1g"; depends=[]; }; rapport = derive2 { name="rapport"; version="1.0"; sha256="1i1zawar5yxw23km74mrvaxnc9hr06kqjvbm046c09cqi6pw0hjh"; depends=[pander rapportools stringr yaml]; }; rapportools = derive2 { name="rapportools"; version="1.0"; sha256="1sgv4sc737i12arh5dc3263kjsz3dzg06qihfmrqyax94mv2d01b"; depends=[pander plyr reshape]; }; raptr = derive2 { name="raptr"; version="0.1.2"; sha256="17aba9jxlvvf2946wy2y0ck5j85sqzkr8q1yk68cdqkf45lxkvz8"; depends=[adehabitatHR assertthat BH boot doParallel gdalUtils ggplot2 hypervolume ks Matrix mvtnorm PBSmapping plyr RandomFields raster RColorBrewer Rcpp RcppEigen rgdal rgeos RgoogleMaps scales shape sp]; }; + rare = derive2 { name="rare"; version="0.1.1"; sha256="0j78ilswiaxdp9107psiw8ibxncd7i81z2njhfqf0n7532pbvjss"; depends=[glmnet Matrix Rcpp RcppArmadillo]; }; rareGE = derive2 { name="rareGE"; version="0.1"; sha256="0v3a2wns77q923ilddicqzg0108f8kmfdnsff1n65icin7cfzsny"; depends=[MASS nlme survey]; }; rareNMtests = derive2 { name="rareNMtests"; version="1.1"; sha256="13r2hipqsf8z9k48ha5bh53n3plw1whb7crpy8zqqkcac8444b2z"; depends=[vegan]; }; rarhsmm = derive2 { name="rarhsmm"; version="1.0.7"; sha256="0pvqa6f0ib1jb0rwc6wv6hfinncb21v2g0y0hsy5l33gdagjw2sz"; depends=[glmnet Rcpp RcppArmadillo]; }; rasclass = derive2 { name="rasclass"; version="0.2.2"; sha256="1lsmv8kh519mz3szb4k9s17fz1480cw0i4qk12givhhm2rpzjy50"; depends=[car e1071 nnet randomForest RSNNS]; }; rase = derive2 { name="rase"; version="0.3-3"; sha256="03jqf5y5vj354m9psp81wzw6d7dfqr76bfjqv9kannsakkj587sy"; depends=[ape mvtnorm polyCub rgl sm spatstat]; }; - raster = derive2 { name="raster"; version="2.6-7"; sha256="009bwil3n9gaf11wzifwxyw9j6pl0pyjk3l5v7csd935si7q14gv"; depends=[Rcpp sp]; }; + raster = derive2 { name="raster"; version="2.7-15"; sha256="1b0js80bypy2nh91y12pfxqwldwq8y09dhkrjqkgj9n89k5fj55s"; depends=[Rcpp sp]; }; rasterImage = derive2 { name="rasterImage"; version="0.3.0"; sha256="0csx7wqwxdsddypd1c9wv74gcyymasn9n6pn05a35j6xhqbk2zp3"; depends=[plotrix]; }; rasterKernelEstimates = derive2 { name="rasterKernelEstimates"; version="1.0.1"; sha256="1733ic1hxym3gyibk2ysy5zzq7s9rbf6jx63x7irnrcavq151f8s"; depends=[raster]; }; rasterList = derive2 { name="rasterList"; version="0.5.8"; sha256="0q7apglxzpah04463z07cpkzyd6l6dbbdhm601brzh6yk75z20vh"; depends=[raster]; }; rasterVis = derive2 { name="rasterVis"; version="0.45"; sha256="0x1d28jn6l78lhccbnlnzyr18734f16rcfnfyl9vqpkrn7sgwc3i"; depends=[hexbin lattice latticeExtra raster RColorBrewer sp viridisLite zoo]; }; - ratelimitr = derive2 { name="ratelimitr"; version="0.3.9"; sha256="0w6i9czcbj8ipd9nn4w4h4pqk6xd8anh00cn60hss9hs18fcb21d"; depends=[assertthat]; }; + ratelimitr = derive2 { name="ratelimitr"; version="0.4.1"; sha256="06x759jxr5zcnvg9q120n5bpipkb16piw15kxrpk7i918mby889b"; depends=[assertthat]; }; ratematrix = derive2 { name="ratematrix"; version="1.0"; sha256="09nbgybgdgdkc6bdcxjiy1kdgv398lgih1aqzd7abj5lndlh8pny"; depends=[ape coda corpcor ellipse geiger MASS mvMORPH phylolm Rcpp RcppArmadillo readr]; }; rateratio_test = derive2 { name="rateratio.test"; version="1.0-2"; sha256="1a2v12z2dr893ha80fhada1820z5ih53w4pnsss9r9xw3hi0m6k5"; depends=[]; }; raters = derive2 { name="raters"; version="2.0.1"; sha256="16jnx6vv39k4niqkdlj4yhqx8qbrdi99bwzxjahsxr12ab5npbp1"; depends=[]; }; ratesci = derive2 { name="ratesci"; version="0.3-0"; sha256="1mdx47xpgjrjbb3lybajdmxb87dqr6cvv3fsvwfx0n629mjbih4z"; depends=[]; }; rationalfun = derive2 { name="rationalfun"; version="0.1-0"; sha256="15949vs9pdjz7426zhgqn7y87xzn79ikrpa2vyjnsid1igpyh0mp"; depends=[polynom]; }; ratios = derive2 { name="ratios"; version="1.2.0"; sha256="16q9v2lhgklvdp3hi9x3afdldznfpwg775p80m2g5074q2dzjpgg"; depends=[data_table stringr]; }; - rattle = derive2 { name="rattle"; version="5.1.0"; sha256="0xxf2wpazsk29y2byyk010n59vmzmhm4phpsqvklmsr1v3m10pvp"; depends=[cairoDevice dplyr ggplot2 magrittr RGtk2 rpart_plot stringi stringr tidyr XML]; }; + rattle = derive2 { name="rattle"; version="5.2.0"; sha256="099anyq4spb7dbikxb29aacqp4xswr66hxjgxiwcvhm9jjryb33v"; depends=[dplyr ggplot2 magrittr rpart_plot stringi stringr tidyr XML]; }; rattle_data = derive2 { name="rattle.data"; version="1.0.2"; sha256="0cnmyzvy23jc4vz521c3jg0w4165waycvy5014l5773fy19zq75c"; depends=[]; }; raw = derive2 { name="raw"; version="0.1.6"; sha256="0hnqwa9pwj3k2y0bs6hxrvbwksjyq0q6m73c9hhlafg8g3lkyxnf"; depends=[]; }; + rayshader = derive2 { name="rayshader"; version="0.5.1"; sha256="1qkv25p0n10zgs3r12i8kwgw6188c0k9a80wg9i12mjpy2pbrxmz"; depends=[doParallel foreach imager magrittr png progress raster Rcpp rgl scales]; }; rbacon = derive2 { name="rbacon"; version="2.3.4"; sha256="1va1rap2n6mcjfzclqg5h58ggrs2kb4nlaam5ch984w9rzq59g2l"; depends=[coda Rcpp]; }; rbamtools = derive2 { name="rbamtools"; version="2.16.11"; sha256="1pr1isq9yk5mpi41cnihg4zn5g9az7yr9m42759hibqqyb6nw78a"; depends=[refGenome]; }; - rbcb = derive2 { name="rbcb"; version="0.1.5"; sha256="0w76jgl75i36xb150m5vlqbd6k0nhxx34fcl0vw9l1in5pwd6qgw"; depends=[httr jsonlite tibble xml2 xts]; }; rbefdata = derive2 { name="rbefdata"; version="0.3.5"; sha256="12mcqz0pqgwfw5fmma0gwddj4zk0hpwmrsb74dvzqvgcvpfjnv98"; depends=[RColorBrewer RCurl rjson rtematres wordcloud XML]; }; rbenchmark = derive2 { name="rbenchmark"; version="1.0.0"; sha256="010fn3qwnk2k411cbqyvra1d12c3bhhl3spzm8kxffmirj4p2al9"; depends=[]; }; rbgm = derive2 { name="rbgm"; version="0.0.5"; sha256="1gz9hxlwmj2ch1ds6mx1nlkwy4fm811jkz5fz3cl6675n11bjdpg"; depends=[dplyr geosphere raster readr rlang sp stringr tibble]; }; rbhl = derive2 { name="rbhl"; version="0.8.0"; sha256="1avx36as99za19acjh7adb72ckdn69rmiwzcrrqxskzny56vxf0d"; depends=[crul jsonlite plyr tibble xml2]; }; rbi = derive2 { name="rbi"; version="0.9.1"; sha256="0jfaakzl15dz6bsbcd6y2pnf3bdccs3bx90c6hzsjpvck7fcvxpi"; depends=[data_table ncdf4 reshape2]; }; rbiouml = derive2 { name="rbiouml"; version="1.8"; sha256="0qvc896sf6idczbxix3klf56paxf0wpfbmga8qqlcyjasv1dsdql"; depends=[RCurl RJSONIO]; }; - rbison = derive2 { name="rbison"; version="0.6.0"; sha256="09mbhk56ns1qldgcj8qard3dsvsfbnlrq4s4drc46lr1s8lqjd1h"; depends=[crul dplyr ggplot2 jsonlite mapproj plyr sp]; }; + rbison = derive2 { name="rbison"; version="0.7.0"; sha256="0v9i45pdjdspc1xw1mm3zmmsdnq5s7s656mkkhssmhj603f3mswg"; depends=[crul data_table dplyr ggplot2 jsonlite mapproj plyr sp]; }; + rbit = derive2 { name="rbit"; version="1.0.0"; sha256="09ywr711gv0vgfims2vfcxk3rnd0iadzlksil0q9159yarapfc59"; depends=[R6]; }; rbitcoinchartsapi = derive2 { name="rbitcoinchartsapi"; version="1.0.4"; sha256="0r272jvjh3rzch8dmn4s0a5n5k6dsir7pr4qswzfvafqjdiwjajz"; depends=[RCurl RJSONIO]; }; rbmn = derive2 { name="rbmn"; version="0.9-2"; sha256="1zy832y399cmfmhpyfh7vfd293fylf1ylmp8w8krkmzkmyfa80f2"; depends=[MASS]; }; rbokeh = derive2 { name="rbokeh"; version="0.5.0"; sha256="1lpbph6bhh9rf5rs0ivp8dchx8i8ylz5nr7xc2xv9bnwlwj35729"; depends=[digest ggplot2 gistr hexbin htmlwidgets jsonlite lazyeval magrittr maps pryr scales]; }; rbounds = derive2 { name="rbounds"; version="2.1"; sha256="1h334bc37r1vbwz1b08jazsdrf6qgzpzkil9axnq5q04jf4rixs3"; depends=[Matching]; }; rbraries = derive2 { name="rbraries"; version="0.1.0"; sha256="12vdci4rzjvd419nxh99hpkhjlx86nsmrbjca0am5q0rkc68dgmj"; depends=[crul data_table fauxpas jsonlite tibble]; }; + rbtc = derive2 { name="rbtc"; version="0.1-5"; sha256="1yw5b8qgvznchqx0zndvkhcrl9ww4sn92x7khzwc9hlbr32j14ls"; depends=[gmp httr openssl rjson]; }; rbtt = derive2 { name="rbtt"; version="0.1.0"; sha256="1gbsb0vmqxcl28c5nn0rz95bxrvl7i0b17lq90cj5ahbk6x9jblz"; depends=[data_table]; }; rbugs = derive2 { name="rbugs"; version="0.5-9"; sha256="1kvn7x931gjpxymrz0bv50k69s1x1x9mv34vkz54sdkmi08rgb3y"; depends=[]; }; rbundler = derive2 { name="rbundler"; version="0.3.7"; sha256="0wmahn59h9vqm6bq1gwnf6mvfkyhqh6xvdc5hraszn1419asy26f"; depends=[devtools]; }; rbvs = derive2 { name="rbvs"; version="1.0.2"; sha256="1wzxz2ca8f1phhbqr9p7c8sk09cyrdq5jc45g4ddrqvi2q29k28y"; depends=[]; }; rcane = derive2 { name="rcane"; version="1.0"; sha256="0p2mgkq6fh0n289n2h19c52lnqxl05wvpmd6nwvgnjqwa4wwpa7r"; depends=[]; }; rcanvec = derive2 { name="rcanvec"; version="0.2.1"; sha256="0gsk2cfiysxjw2lrnpl2l524lvhh9nhnyyh79n8p7vykyqj711yn"; depends=[rgdal sp]; }; - rcarbon = derive2 { name="rcarbon"; version="1.1.3"; sha256="08gg72gakns9akcsi5j79jxsx8cngbzf3sg0qvpj22xsrp7amxr2"; depends=[doParallel foreach knitr sp]; }; + rcarbon = derive2 { name="rcarbon"; version="1.2.0"; sha256="0dd7x7i8d592gnn9c3dk706drd3irhi1k4iivlngfm44ck3wlpzn"; depends=[doParallel foreach knitr sp]; }; rcartocolor = derive2 { name="rcartocolor"; version="0.0.22"; sha256="1dh1n01v70sfmymg1w0f272j6nwnrzawqx5x4ljgh46pzqprx56r"; depends=[ggplot2 scales]; }; rcbalance = derive2 { name="rcbalance"; version="1.8.5"; sha256="15qlk3cqwsvixl17l1fxcajrabmz4y7q5gz0a1pd66f6i1xskcqq"; depends=[MASS plyr]; }; rcbsubset = derive2 { name="rcbsubset"; version="1.1.4"; sha256="0sfsmnxs4c8blzg0bb2ffb2xcsjv7pp39arnda988f7b2aas59wj"; depends=[MASS plyr]; }; @@ -10318,25 +10768,28 @@ in with self; { rccdates = derive2 { name="rccdates"; version="1.0.0"; sha256="1f87qlw62am2qy1zzrz91vmsn8axhld44gak61xa7046675hm98s"; depends=[rccmisc]; }; rccmisc = derive2 { name="rccmisc"; version="0.3.7"; sha256="171s2ll759xjdnx0z24ih5ix2vcp4qnmf1nf107gij6wv8k450ab"; depends=[dplyr]; }; rcdd = derive2 { name="rcdd"; version="1.2"; sha256="1s7idrfvl0hhyckrfiakszqw6fk34f9iiyxspzya3rqyhih014ay"; depends=[]; }; - rcdk = derive2 { name="rcdk"; version="3.4.7"; sha256="1r7cqr9adcbvw5zcnh0vpfahi5ywcjk8axhpj1pqrv24lb208c6j"; depends=[fingerprint iterators itertools png rcdklibs rJava]; }; + rcdk = derive2 { name="rcdk"; version="3.4.7.1"; sha256="1d08ajji631792b7fyfwzvcaswh8jlanfsxrj6c1wx7xh3qqpigg"; depends=[fingerprint iterators itertools png rcdklibs rJava]; }; rcdklibs = derive2 { name="rcdklibs"; version="2.0"; sha256="05g0y00bw1bqykfbwn4q42krwcfl50jcavaw7yyw9a5m34hvw0l8"; depends=[rJava]; }; rchallenge = derive2 { name="rchallenge"; version="1.3.0"; sha256="1qn2pzch5yk771jsjcsmfsi5vddfb2w50vfqlkmsl6nf5z6sdq9k"; depends=[knitr rmarkdown]; }; + rcheology = derive2 { name="rcheology"; version="3.5.1.1"; sha256="1yb9d55x6ffam4lirpfign3czx5c14nc1qz0cxqyi9ak63p9mb13"; depends=[]; }; rchess = derive2 { name="rchess"; version="0.1"; sha256="0qnvvvwcl02rmqra9m7qnhy40cbavswbq6i0jm47x6njmr1gpfhy"; depends=[assertthat dplyr ggplot2 htmlwidgets plyr R6 V8]; }; rcicr = derive2 { name="rcicr"; version="0.3.4.1"; sha256="1sa13sbhx64cf8szr2811iq4a1asb8d3k0igxw6fbssij2lwbxzp"; depends=[aspace dplyr jpeg matlab scales]; }; + rcites = derive2 { name="rcites"; version="0.1.0"; sha256="0n8wcyjj41ggmry9lrm7j4f1gcq8l97cdsknkgmb4a0l0da1c6xk"; depends=[data_table httr jsonlite]; }; rclimateca = derive2 { name="rclimateca"; version="1.0.2"; sha256="012p6vj78m43y8n85diaf5z11h4v0p4s898jmlipvsha11q60csn"; depends=[digest dplyr httr lubridate magrittr mudata2 prettymapr purrr readr reshape2 rlang stringr tibble tidyr]; }; rclipboard = derive2 { name="rclipboard"; version="0.1"; sha256="0qphr3qrp0k2gnzk27bgfiq3ff6b8564gmkrjw1kri1p7ilf71wx"; depends=[shiny]; }; - rcmdcheck = derive2 { name="rcmdcheck"; version="1.2.1"; sha256="04gh0drvkikn91i5zmpixhrhyjnsyxwz8k8bx4kgwwrmh1dc7f2s"; depends=[callr clisymbols crayon digest withr]; }; - rcompanion = derive2 { name="rcompanion"; version="1.13.2"; sha256="0kpr0pxfi8al6zdx0imp9nf9m98h8srimij7gf018ik4v6kjyjiv"; depends=[boot BSDA coin DescTools EMT hermite lattice lmtest multcompView nortest ordinal plyr RVAideMemoire WRS2]; }; + rcmdcheck = derive2 { name="rcmdcheck"; version="1.3.0"; sha256="13liz9lmx9xgc0f7pjiz3sp8ygvazx2zslbiwz3p9fimfsx1yfsg"; depends=[callr cli crayon desc digest pkgbuild prettyunits R6 rprojroot withr xopen]; }; + rcompanion = derive2 { name="rcompanion"; version="2.0.0"; sha256="1zbx4r43ql14hqwq6hpyy4dv7igbs6dl96127kriiyfvbkj0cmyw"; depends=[boot BSDA coin DescTools EMT lmtest multcompView nortest plyr]; }; rcongresso = derive2 { name="rcongresso"; version="0.4.6"; sha256="1xd07vlbcp3msmwvg2nk7acdx513v2wfbq64na0045rsv2v96m44"; depends=[dplyr httr jsonlite magrittr stringr tibble tidyr]; }; - rcoreoa = derive2 { name="rcoreoa"; version="0.1.0"; sha256="13nfziqxxljnczn3idq3zlc9xkklalfnxbakvhs5bw19jmbd11ba"; depends=[crul jsonlite pdftools]; }; - rcorpora = derive2 { name="rcorpora"; version="1.2.0"; sha256="0nxd2arzz2617xxcngvcrrrsky9f1b9zdmpv81zr89y08b3xh9f1"; depends=[jsonlite]; }; + rcoreoa = derive2 { name="rcoreoa"; version="0.3.0"; sha256="0z9kllhk1j7c4sgnd88ngxv7xvr396azg9vr9p6i72ficr7flr64"; depends=[crul hoardr jsonlite pdftools]; }; + rcorpora = derive2 { name="rcorpora"; version="2.0.0"; sha256="1b8xa81mn3afadz77576vda9b0d99f1k096drxrpqd989g993aqy"; depends=[jsonlite]; }; rcreds = derive2 { name="rcreds"; version="0.6.6"; sha256="1sdrdgn53kgcdnxfjs8jh0h538vb3b9ixz74lbnp54yp09jpqsri"; depends=[collectArgs digest jsonlite magrittr]; }; - rcrossref = derive2 { name="rcrossref"; version="0.8.0"; sha256="01k3jpd6awan8r4kc5wjw0did30i2bafzjr8mwaaqv87gni2yiyf"; depends=[bibtex crul dplyr jsonlite miniUI plyr R6 shiny stringr xml2]; }; + rcrossref = derive2 { name="rcrossref"; version="0.8.4"; sha256="1q58wngr28a0vrafwhxj8jvh42aprv2v1s68mdbbq30rn28yplj7"; depends=[bibtex crul dplyr DT jsonlite miniUI plyr R6 shiny stringr xml2]; }; + rcrtan = derive2 { name="rcrtan"; version="0.1.0"; sha256="1pg0w9amlxnzv5mrh4p3gnh8959m93dx8bfy2gvbm94isilb969z"; depends=[dplyr magrittr purrrlyr tibble tidyr]; }; rcrypt = derive2 { name="rcrypt"; version="0.1.1"; sha256="002r5wr0bmqbj014iz8wacj883j6gqcxc786m6p9a7zdrjpx2pqi"; depends=[]; }; - rcube = derive2 { name="rcube"; version="0.2"; sha256="1vfh0bg0awynbv0kafsn7sqj7sc2rjaap9rmy717qv9p0n6gkypr"; depends=[magrittr]; }; + rcube = derive2 { name="rcube"; version="0.3"; sha256="0y4sw67g0ws3iywbaz56ccg5q6n2885yfl8rvb45yvwjmdmbg85r"; depends=[magrittr]; }; rcure = derive2 { name="rcure"; version="0.1.0"; sha256="1pcdc168bwn0b90xy8sdwrm2yvhj26xj11wm8z84m48sxy56j4v8"; depends=[arm MASS plyr smcure survival]; }; rcv = derive2 { name="rcv"; version="0.2.1"; sha256="0i5z3a918ykl56dv3dvzwwcv550gvjjdg5kfh63jlpaxn9ybmv3f"; depends=[dplyr readr stringr tibble tidyr]; }; - rda = derive2 { name="rda"; version="1.0.2-2"; sha256="1g2q7c0y138i9r7jgjrlpqznvwpqsj6f7vljqqfzh2l6kcj43vjj"; depends=[]; }; + rda = derive2 { name="rda"; version="1.0.2-2.1"; sha256="1y4fawslr3i6crjaxhsdb47kfsqkyszdx6avq3r5far5a4pvc639"; depends=[]; }; rdatacite = derive2 { name="rdatacite"; version="0.4.0"; sha256="14p8albilnzf882m499zfps77jrx0zav9wpz3m047xgs2msnwxqw"; depends=[crul jsonlite oai solrium]; }; rdatamarket = derive2 { name="rdatamarket"; version="0.6.5"; sha256="1y4493cvhcgyg2j5hadx1fzmv2lzwan78jighi2dzyxxzv6pxccn"; depends=[RCurl RJSONIO zoo]; }; rdataretriever = derive2 { name="rdataretriever"; version="1.0.0"; sha256="1a1dbzs1jravbhidv9wcs52qbd6zf7wf26hixpqjwiq8gsq9l5gh"; depends=[]; }; @@ -10345,7 +10798,7 @@ in with self; { rddensity = derive2 { name="rddensity"; version="0.2.2"; sha256="10530il8fxpgcads6yvj09jwanldlpvjgjqcknl2wly4gmwcwjq9"; depends=[ggplot2 lpdensity]; }; rddtools = derive2 { name="rddtools"; version="0.4.0"; sha256="1z9sl9fwsq8zs1ygmnjnh3p6h9hjkikbm4z7cdkxw66y0hxgn96s"; depends=[AER Formula ggplot2 KernSmooth lmtest locpol np rdd sandwich]; }; rde = derive2 { name="rde"; version="0.1.0"; sha256="1zw9gdh90hl0wc5c0xwl5x7566r611wk73sbqdmpzpswjyyl9aqm"; depends=[clipr]; }; - rdefra = derive2 { name="rdefra"; version="0.3.4"; sha256="05fskap0vvrq08m4gql9gczy04lc3dgxgjcsb57dgp3nng358sf6"; depends=[dplyr httr lubridate rgdal sp tibble xml2]; }; + rdefra = derive2 { name="rdefra"; version="0.3.5"; sha256="0mj5xpr1xk0r2ph9fvbabmzrb9yqgdaj0bl76xrhkzisdkagf705"; depends=[dplyr httr lubridate rgdal sp tibble xml2]; }; rdetools = derive2 { name="rdetools"; version="1.0"; sha256="0pkl990viv7ifr7ihgdcsww93sk2wlzp2cg931wywagfp8dijd02"; depends=[]; }; rdflib = derive2 { name="rdflib"; version="0.1.0"; sha256="1xq378nfvbk8b2nbnr6yswqr351pgli7jcmhcr1ipynkl93rl5qm"; depends=[jsonld readr redland stringi]; }; rdfp = derive2 { name="rdfp"; version="0.1.2"; sha256="1kznr5p5mhplgpgmc0f4vrs1fwpivwjy52hwfc8k0q0vx53h3fs2"; depends=[curl dplyr httr lubridate plyr purrr readr XML xml2]; }; @@ -10354,23 +10807,23 @@ in with self; { rdist = derive2 { name="rdist"; version="0.0.3"; sha256="1jp3s4293h973dpz0waq9abpd8ibp4gxdyk3bwn7a32zfpk4kjza"; depends=[Rcpp RcppArmadillo]; }; rdiversity = derive2 { name="rdiversity"; version="1.2.1"; sha256="0j67b9mnq2xfbi2hrn1x9vgdv63779d0rcbzndljh37b1x5zlr22"; depends=[ape ggplot2 ggthemes phangorn phytools plyr reshape2 tibble tidyr]; }; rdlocrand = derive2 { name="rdlocrand"; version="0.3"; sha256="1cv69iy5sx9kdplpk9hnriqzgrm5mjbmhax4cybszhsyaly6r78d"; depends=[AER sandwich]; }; - rdmulti = derive2 { name="rdmulti"; version="0.1"; sha256="0a2nppb59054ns0ya3igva7xjaivnsj023fd30pzwca99zsmnx6s"; depends=[rdrobust]; }; - rdnb = derive2 { name="rdnb"; version="0.1-1"; sha256="1mg40jad79mk95ndnljvfvyh9rhbxkw7inpg2vbsixf1ywdljri3"; depends=[brew httr xml2]; }; + rdmulti = derive2 { name="rdmulti"; version="0.2"; sha256="1sl677kaq5qr2m9nzxfslwzai7h07mdfqjjzrak2xbpgqa44288z"; depends=[rdrobust]; }; + rdnb = derive2 { name="rdnb"; version="0.1-2"; sha256="1phb86jv2caayr4p95p68jrksai9w922rl3y5hjkw3gkc3jxn09f"; depends=[brew httr xml2]; }; rdoxygen = derive2 { name="rdoxygen"; version="1.0.0"; sha256="16907969w66xvy62k45rw10qfv4x8z6jkkc6i97vppkgnlvf4d4b"; depends=[devtools]; }; rdpla = derive2 { name="rdpla"; version="0.2.0"; sha256="0d32bp68z1agymcmjwnds4fkblhjrcx8i2q6f5b7sl4kdfdbjchf"; depends=[crul data_table hoardr jsonlite tibble]; }; - rdpower = derive2 { name="rdpower"; version="0.1"; sha256="1pi0g980zgy0h3kyiksnbpi59fksm17g9lxinqjf7xiam7pgw99n"; depends=[rdrobust]; }; - rdrobust = derive2 { name="rdrobust"; version="0.99.1"; sha256="18hq4nmyf8327qdbh7m8y0av6f21pcxaxfqs0qrc07yf6sdcj6ri"; depends=[]; }; + rdpower = derive2 { name="rdpower"; version="0.3"; sha256="1jdr18xrnws07iczi1f52l3py9fhxgvpina230jyr713hz99hzm3"; depends=[rdrobust]; }; + rdrobust = derive2 { name="rdrobust"; version="0.99.4"; sha256="0ykz9lgkr95l6h7jk9k8k0yv26hd4iyvgr9j298l388ry9w1ph9w"; depends=[]; }; rdrop2 = derive2 { name="rdrop2"; version="0.8.1"; sha256="1f4ysck58dm40k4wn9nfjaxym0mbgfkm146iidfkz7agmd1x0xyl"; depends=[assertive digest dplyr httr jsonlite magrittr purrr]; }; rdryad = derive2 { name="rdryad"; version="0.4.0"; sha256="19ca618hymvpk5byrrglc6iidsgm6wn43fypspssa7b3r1c4xhdc"; depends=[crul curl data_table oai solrium tibble xml2]; }; rdwd = derive2 { name="rdwd"; version="0.10.2"; sha256="18ghcg1arm5k2gan2h71bx0h27hsqr0mkajb5sha0ijyby3wa4h8"; depends=[berryFunctions pbapply]; }; re2r = derive2 { name="re2r"; version="0.2.0"; sha256="0xv355h4bps4a0picxmi6i15niq4knlail80fp9xvszyn72pm8gq"; depends=[htmlwidgets Rcpp RcppParallel stringi]; }; reGenotyper = derive2 { name="reGenotyper"; version="1.2.0"; sha256="13g4fhj25kdk6wbl1hcabcaxcpv0dj0hj2l502wl1aywk1fvmy8m"; depends=[gplots MatrixEQTL zoo]; }; - reReg = derive2 { name="reReg"; version="1.1.4"; sha256="0333r1rv9nshxmg7x2s5pdf7mk7pmpxdzfk617pmjkvf7qbfqfpa"; depends=[BB dplyr ggplot2 MASS nleqslv plyr purrr SQUAREM survival tidyr]; }; - reactR = derive2 { name="reactR"; version="0.2.0"; sha256="17jdcby95fxfa3imalllnqsp16py5vqqj4y0za4wli91vd37555q"; depends=[htmltools]; }; + reReg = derive2 { name="reReg"; version="1.1.6"; sha256="198vgf3294if9zmvl54pgx6ram63pswpjnh44fy7n60g8nza44bb"; depends=[BB dplyr ggplot2 MASS nleqslv plyr purrr SQUAREM survival tibble tidyr]; }; + reactR = derive2 { name="reactR"; version="0.2.1"; sha256="1abj3lh2vk4pni5gn2vb8sym2j2sx7yvnph86nz9hp6r270d0g86"; depends=[htmltools]; }; read_dbc = derive2 { name="read.dbc"; version="1.0.5"; sha256="1vrvxkcrk3iw5am9rsadxzf0wsr7z2mdpa5wb0v9jbhda710b4yf"; depends=[foreign]; }; readBrukerFlexData = derive2 { name="readBrukerFlexData"; version="1.8.5"; sha256="1qmimfxwh6d7s5qrnnk20i2f9l5j1ci3wpfs3qlmggz69jzf589m"; depends=[]; }; readHAC = derive2 { name="readHAC"; version="1.0"; sha256="0z80ai6xfswwgdfh83l9sq279c97n0wz25bk2l7xfb6w0sndzq53"; depends=[]; }; - readJDX = derive2 { name="readJDX"; version="0.2.3"; sha256="0qqzplyhpyhf24111y12r0h299wz86scjymfrym2ycxm04116vw5"; depends=[stringr]; }; + readJDX = derive2 { name="readJDX"; version="0.3.250"; sha256="0h7yfc0y4b67rhh949zknqyjx0jknsld1099y9x563a5lhzwrchv"; depends=[stringr]; }; readMLData = derive2 { name="readMLData"; version="0.9-7"; sha256="0l752j1jq37j9pdcsbmcb23b5l8fkfsbisfr3yjy3q4rxsphc7k6"; depends=[XML]; }; readMzXmlData = derive2 { name="readMzXmlData"; version="2.8.1"; sha256="03lnhajj75i3imy95n2npr5qpm4birbli922kphj0w3458nq8g8w"; depends=[base64enc digest XML]; }; readODS = derive2 { name="readODS"; version="1.6.4"; sha256="1kj648phxvpg480fdhr2sj4l8q306gjdl886zqnkwxif5mw1aq7g"; depends=[cellranger readr xml2]; }; @@ -10380,7 +10833,8 @@ in with self; { readbulk = derive2 { name="readbulk"; version="1.1.0"; sha256="0m02isvja0ihvy1fscjdl5f9gfdlmfmabgvpirgd2m9j3lz6mi8s"; depends=[plyr]; }; reader = derive2 { name="reader"; version="1.0.6"; sha256="1x489q3ljap4zpny68mx83mgxaqiwlkglcy57whwhnh33dd7qp4h"; depends=[NCmisc]; }; readit = derive2 { name="readit"; version="1.0.0"; sha256="1sq2spjgdc9rq8cr5i9qjmqd4vcf7cknpx5dndwjdqrv112y8bk9"; depends=[crayon haven jsonlite readr readxl]; }; - readobj = derive2 { name="readobj"; version="0.3"; sha256="0hwxfk27azay8hjz702b10cg395is06wnypqdw4788gm25d0i041"; depends=[Rcpp]; }; + readmnist = derive2 { name="readmnist"; version="1.0.6"; sha256="0f2kp5r04k47gpvbj8x13c47zsis3bw3y8f5f37sh6jggblqr004"; depends=[]; }; + readobj = derive2 { name="readobj"; version="0.3.1"; sha256="1hnmj6ydvdss7jbl3h16ip0g993wdfyfm15r8f78ihjlh84swima"; depends=[Rcpp]; }; readr = derive2 { name="readr"; version="1.1.1"; sha256="1cvw5wdcqk88cp5fyv678mnmp66l3whcd2yh33p2qvx0168bja8s"; depends=[BH hms R6 Rcpp tibble]; }; readroper = derive2 { name="readroper"; version="0.9.1"; sha256="153iy144c4yxcs2cwr73czy69b4fj4q1g77rb8qmvp6blfwdcd71"; depends=[readr]; }; readstata13 = derive2 { name="readstata13"; version="0.9.2"; sha256="02mqwpzn7n3pqjxivnd1vlfc47xkyiywfz594x0f6vd2dym8rdwd"; depends=[Rcpp]; }; @@ -10388,8 +10842,8 @@ in with self; { readxl = derive2 { name="readxl"; version="1.1.0"; sha256="05ii8knrg4jji6h7bv6bfpn279b6x52yrskdx5rv7b0hcpy22gdn"; depends=[cellranger Rcpp tibble]; }; realestateDK = derive2 { name="realestateDK"; version="0.1.0"; sha256="02y3c2zww9jakh9a0jqxkgcwshjz1hd5mw63603hyic7q4a07iv3"; depends=[statsDK]; }; reams = derive2 { name="reams"; version="0.1"; sha256="07hqi0y59kv5lg0nl75xy8n48zw03y5m71zx58aiig94bf3yl95c"; depends=[leaps mgcv]; }; - rebird = derive2 { name="rebird"; version="0.4.0"; sha256="1awwjr0gsd7hksh84fz5p17qwd857zn03fc2q0kzncy6q6iiw481"; depends=[dplyr httr jsonlite]; }; - rebmix = derive2 { name="rebmix"; version="2.10.2"; sha256="1m6h85kxp7lirx0pqhlibkd6f2wvgyhbmndrw308imkmzyqhgjz3"; depends=[mvtnorm]; }; + rebird = derive2 { name="rebird"; version="1.0.0"; sha256="0gp8afj6y3vss2b11v0fqyc3ai67kilicr4fnk5zghljfvbxsxm8"; depends=[assertthat dplyr httr jsonlite]; }; + rebmix = derive2 { name="rebmix"; version="2.10.3"; sha256="0yhazicibq8h2d7ldv59isapc6f68psawa3vrs1fdzwkrraj6893"; depends=[mvtnorm]; }; rebus = derive2 { name="rebus"; version="0.1-3"; sha256="0ms3dm6g0fq3jycpgjl7q7kyljxc97cczy2jj0lyviwmipdgjg9d"; depends=[rebus_base rebus_datetimes rebus_numbers rebus_unicode]; }; rebus_base = derive2 { name="rebus.base"; version="0.0-3"; sha256="1n2khszcya9k6379bdkq47xi2nw9jngiwj7z8a14wfswqydczv6y"; depends=[]; }; rebus_datetimes = derive2 { name="rebus.datetimes"; version="0.0-1"; sha256="09lv41mywm13avxb0xp8x1a2xz50zxazh3lpg27m16d4cgijmhm5"; depends=[rebus_base]; }; @@ -10398,24 +10852,24 @@ in with self; { recexcavAAR = derive2 { name="recexcavAAR"; version="0.3.0"; sha256="0b91jbgqzkgzvk658ckk639yyz1daa0xql3qgl0kzgqg68d53x20"; depends=[kriging Rcpp]; }; rechonest = derive2 { name="rechonest"; version="1.2"; sha256="0vpff8q5p6in7vjyl62bx3wmksravcg4mpx20qlgy5ia47vyhqp2"; depends=[httr jsonlite RCurl]; }; recipes = derive2 { name="recipes"; version="0.1.3"; sha256="1vqh3pxs4n1azhnd1lzg91vasya6g323kllhbrw177j7kdxqyimy"; depends=[broom ddalpha dimRed dplyr gower ipred lubridate magrittr Matrix pls purrr RcppRoll rlang tibble tidyr tidyselect timeDate]; }; - reclin = derive2 { name="reclin"; version="0.1.0"; sha256="1r88rk1yb19lhd1y69h016s26390cg5gnmxjjh143lynm3pbh0sv"; depends=[dplyr ldat lpSolve lvec Rcpp stringdist]; }; + reclin = derive2 { name="reclin"; version="0.1.1"; sha256="15qrdgjmclffivnljgmmipws9ks41fj4q40wnq0fk14mbv2045g2"; depends=[dplyr ldat lpSolve lvec Rcpp stringdist]; }; recluster = derive2 { name="recluster"; version="2.8"; sha256="05g8k10813zbkgja6gvgscdsjd99q124jx31whncc4awdsgk69s4"; depends=[ape cluster phangorn phytools picante vegan]; }; - recmap = derive2 { name="recmap"; version="0.5.33"; sha256="0znmsd7s25i2ildb4ysan10ih8s37rb8f794b6kp6cvy3zm81cbp"; depends=[GA Rcpp sp]; }; + recmap = derive2 { name="recmap"; version="1.0.0"; sha256="09aa6480lsrcqwh82rp9sijf720pkbihb5rrc3a74wr5svry7rd2"; depends=[GA Rcpp sp]; }; recoder = derive2 { name="recoder"; version="0.1"; sha256="0wh0lqp7hfd4lx2xnmszv1m932ax87k810aqxdb6liwbmvwqnfgd"; depends=[stringr]; }; recombinator = derive2 { name="recombinator"; version="1.0.0"; sha256="0amcpicsk270l9h7qgv764wp09phsffdpi4adcxrsrwiwm274ibw"; depends=[crayon]; }; recommenderlab = derive2 { name="recommenderlab"; version="0.2-3"; sha256="0lgfcwxy97cvi893k1dia3nng3yvclnmv95fszzmkcrf4qi9yy7q"; depends=[arules irlba Matrix proxy registry]; }; recommenderlabBX = derive2 { name="recommenderlabBX"; version="0.1-1"; sha256="042yh0h8qxj7n9hysrfdxnpb3g0zb6s5b683s7hn5mjc55q7nn4g"; depends=[recommenderlab]; }; recommenderlabJester = derive2 { name="recommenderlabJester"; version="0.1-2"; sha256="0kr9xc2gih2myn1a8h8dxxmdhibv1sjwjsvlrj9d5hvd1mgfhks5"; depends=[recommenderlab]; }; - reconstructr = derive2 { name="reconstructr"; version="2.0.0"; sha256="1pa6b8zns9495f1bdifvx19hsy5808hqbxb2bn1srwnr4s3ma1zi"; depends=[openssl Rcpp]; }; + reconstructr = derive2 { name="reconstructr"; version="2.0.2"; sha256="0pzpd2l1b6y1b1lnd95lpc5s8niz7p56vkmxgyi6g6b25vh9c2vi"; depends=[openssl Rcpp]; }; recosystem = derive2 { name="recosystem"; version="0.4.2"; sha256="1bn6l23gqmfpr6w60ph7zgv53vy3vnq9zdy5x0a8n1yp6b0lw48x"; depends=[Rcpp RcppProgress]; }; recurse = derive2 { name="recurse"; version="1.1.0"; sha256="1zgzzhbvdzqgmgzj43yvpyc7ahbkn96l5wyr1iqpnn3ha78fy0p3"; depends=[Rcpp]; }; red = derive2 { name="red"; version="1.4.0"; sha256="1z8ja8qbwgpbmy4ira9q6x482nw5rm4bksm82y0vc4gwpdxls5z3"; depends=[BAT dismo geosphere jsonlite maptools raster rgdal rgeos sp]; }; - redR = derive2 { name="redR"; version="1.0.0"; sha256="01safawd9ai34fqxjpc161yzpsk31hfyl8ybcfvdj7a9vdbvcb5i"; depends=[imager]; }; + redR = derive2 { name="redR"; version="1.0.1"; sha256="0bd1jzjip6p449m9ysi4kybxqljh2wj8z9mrgyk1cy08bjivd1cd"; depends=[imager]; }; reda = derive2 { name="reda"; version="0.4.1"; sha256="0aq6c2h694kdmjis12g4nxq5hdlzsi42nbnpzq7wic305l5r7nxl"; depends=[ggplot2 Rcpp RcppArmadillo splines2]; }; - redcapAPI = derive2 { name="redcapAPI"; version="2.1"; sha256="1xdhjr970cg7sr014rviznwg27d2rahc9nfj44b3fghv8jzfc272"; depends=[checkmate chron DBI httr labelVector lubridate stringr tidyr]; }; + redcapAPI = derive2 { name="redcapAPI"; version="2.2"; sha256="0bszw9px7ddcwnc1p3zpd8426mwym5369hglz3qm5x92va1j4036"; depends=[checkmate chron DBI httr labelVector lubridate readr stringr tidyr]; }; reddPrec = derive2 { name="reddPrec"; version="0.4.0"; sha256="0zmkaiivvjq8mcaz310zgjjc7y0wgsqv29bf8nhli5qawaczvb9a"; depends=[fields snowfall]; }; - redist = derive2 { name="redist"; version="1.3-1"; sha256="0rivfi3jpjvhd36rkhlazx4vr7wsig9lf3im1masjmzd4s00zrd8"; depends=[coda doParallel foreach Rcpp RcppArmadillo sp spdep]; }; - redland = derive2 { name="redland"; version="1.0.17-9"; sha256="01jx6r7zznb6cpi2bx36fpsgig3bkc1nv9afz5s2nfqisxiq48w5"; depends=[roxygen2]; }; + redist = derive2 { name="redist"; version="1.3-2"; sha256="0qkv2n9jianxm95vk2dqsqghhf2zirab8vhzc8cc8zichjv79f69"; depends=[coda doParallel foreach Rcpp RcppArmadillo sp spdep]; }; + redland = derive2 { name="redland"; version="1.0.17-10"; sha256="0k28896jsxy1qxnn6iyx3xxasq4y171xfjragqkj568nn9lmzfi8"; depends=[roxygen2]; }; redlistr = derive2 { name="redlistr"; version="1.0.1"; sha256="07zg0yzrcamaag5xcn33mh8i099r2gyz5p47f38lsg33j7am0m8n"; depends=[plyr raster rgeos sp]; }; redux = derive2 { name="redux"; version="1.1.0"; sha256="0a551w7fph338mqzxda6y21lsad19dway7w18jw9cv1rgvcp9nvc"; depends=[R6 storr]; }; refGenome = derive2 { name="refGenome"; version="1.7.3"; sha256="15p0ra2p1pwhy5ixbhsz1g79c5sc2aap4i4c8kil0m2syg9y45sn"; depends=[DBI doBy RSQLite]; }; @@ -10424,7 +10878,7 @@ in with self; { refinr = derive2 { name="refinr"; version="0.3.1"; sha256="0q76sr050pg3ahwzcxj08mjig0k2jq8yh7nv6d914pwg3dhq05sn"; depends=[Rcpp stringdist stringi]; }; refnr = derive2 { name="refnr"; version="0.1.0"; sha256="1gjjzxpyxm1kf1pqk99bd7f2j85rzmww3r1268bccivf19rs881i"; depends=[]; }; refset = derive2 { name="refset"; version="0.1.1"; sha256="1xbwvm9066g3f7pd34z5jh04vph4ddy2lkcgmf4kiwa1k5czpwg1"; depends=[]; }; - refuge = derive2 { name="refuge"; version="0.1.1"; sha256="1l9zbhx93f3ib978hlfvkczpy7c88g7ymwiq8grkycfzz52bfz0b"; depends=[dplyr httr jsonlite tibble]; }; + refuge = derive2 { name="refuge"; version="0.2.0"; sha256="15c1052dp13wcwxi15bnh3x700biw0jcy6b7532rqbgdkv67kqxn"; depends=[dplyr httr jsonlite tibble]; }; refund = derive2 { name="refund"; version="0.1-17"; sha256="1lz90y3zim0vl2gxiy4zw0qhkvg7i0p64jqabblnlx13f3lzn944"; depends=[boot fda gamm4 ggplot2 grpreg lattice lme4 magic MASS Matrix mgcv nlme pbs RLRsim]; }; refund_shiny = derive2 { name="refund.shiny"; version="0.3.0"; sha256="0r2xrm4wz35wn9zg4vvw2ysl7zzbz9i080vnbrlp4yrhhlkhpkm1"; depends=[dplyr ggplot2 gridExtra lme4 plotly refund reshape2 shiny tidyr]; }; refund_wave = derive2 { name="refund.wave"; version="0.1"; sha256="1vnhg7gi5r8scwivqjwhrv72sq8asnm4whx3jk39saphdxpk5hxv"; depends=[glmnet wavethresh]; }; @@ -10432,21 +10886,22 @@ in with self; { regclass = derive2 { name="regclass"; version="1.5"; sha256="0kha9b5ki55ggwh8cmlphg1alf1dq8if5dknisfbvd3f2x4dqf02"; depends=[bestglm leaps randomForest rpart rpart_plot VGAM]; }; regexPipes = derive2 { name="regexPipes"; version="0.0.1"; sha256="1hk0rhvmgzcyf5cyl8hjznl3ll25kpasqikfr6nxd6ian2slvmmb"; depends=[]; }; regexSelect = derive2 { name="regexSelect"; version="1.0.0"; sha256="0xnb9qa8l63ang4r40ky4qhlrs5mbzvmj98dgij26j3mq1ys1pa7"; depends=[shiny shinyjs]; }; - reghelper = derive2 { name="reghelper"; version="0.3.3"; sha256="0lsdsxi3nawqdzs7k1xma95mmywl86k517cihiv8q2s4maihsja3"; depends=[ggplot2 lme4 nlme]; }; + reghelper = derive2 { name="reghelper"; version="0.3.4"; sha256="03ddpa8dhvdsqv0fnbaai4rvblqcr8x6r9z42ljm166pnx5h0spk"; depends=[ggplot2 lme4 nlme]; }; registry = derive2 { name="registry"; version="0.5"; sha256="1yqfl1g6vsl28zn8brzc39659k8lqsmfms7900j7p64ilydyb2sx"; depends=[]; }; - reglogit = derive2 { name="reglogit"; version="1.2-5"; sha256="123l9n3m2v16skhj0rf77swlhy0ii6ridz13pp68hrxb72sr243c"; depends=[boot Matrix mvtnorm]; }; + reglogit = derive2 { name="reglogit"; version="1.2-6"; sha256="1nnn8n5sqhbd3nzmwnpmcsmaxxxaqwbna7xm7q9vk4cqz9cm9b9s"; depends=[boot Matrix mvtnorm]; }; regnet = derive2 { name="regnet"; version="0.3.0"; sha256="1jqy3zkxn3jms9fm950h1bvhvassbfa5yrl7222z3wa0w66kxpp0"; depends=[glmnet Rcpp RcppArmadillo]; }; - regplot = derive2 { name="regplot"; version="0.1"; sha256="1jw93pplg6qdrfv9jhnifkhclxzrhg84zs8gkfl0nb40jxb6pc34"; depends=[beanplot sm survival vioplot]; }; + regplot = derive2 { name="regplot"; version="0.2"; sha256="0j2mra5fqcixyl4wqwpzfng98rdh4xnl79ka7ilfi0jvz2jix84x"; depends=[beanplot sm survival vioplot]; }; regpro = derive2 { name="regpro"; version="0.1.1"; sha256="02axbq63hsqwg3q2ixr0lpsdai9q6wj57s5k1343q9m0pw90vr73"; depends=[denpro]; }; regress = derive2 { name="regress"; version="1.3-15"; sha256="1cgr0r49cmr8nzs2lr2cm8lli1i8azyas0lbnf1681kyab15c0r7"; depends=[]; }; regsel = derive2 { name="regsel"; version="0.2"; sha256="0wwwpawqsqimaldy0zxnqsy23nwp30ypa5dnrnndwhbs4qz99c9w"; depends=[elasticnet glmnet]; }; - regsem = derive2 { name="regsem"; version="1.1.2"; sha256="0d843h1kv78hsn48ibci6w7y69yqd3q32bidgsqs5dxk980kxcsk"; depends=[lavaan Rcpp RcppArmadillo]; }; + regsem = derive2 { name="regsem"; version="1.2.0"; sha256="156jvnxf885c42xpbd2ddakgxkbjmzanc240dzdc5z89a78vcy74"; depends=[lavaan Rcpp RcppArmadillo Rsolnp]; }; regspec = derive2 { name="regspec"; version="2.4"; sha256="18i6k2wqaddrc0dz7v8x3s9205dcfwanqhpnxa9hkpyqzbb17pd3"; depends=[]; }; regsubseq = derive2 { name="regsubseq"; version="0.12"; sha256="0879r4r8kpr8jd6a3fa9cifm7cv0sqzz8z1alkm1b2fr1625md3g"; depends=[]; }; regtest = derive2 { name="regtest"; version="0.05"; sha256="1wrrpp2hvkas0yc512gya3pvd0v97pn4v51k5jxkwyd1pp68zd1q"; depends=[]; }; regtools = derive2 { name="regtools"; version="1.0.1"; sha256="0807r8721qmdl8ahvlzcvqaq2rfvlvhblwbwdpi79fm7dk8vvq1i"; depends=[car dummies FNN mvtnorm]; }; rehh = derive2 { name="rehh"; version="2.0.2"; sha256="00wxx6w9ahddrg3lz14cqyg3dn0rfcxwy1z8arhdp1pn8d48pahw"; depends=[gplots rehh_data]; }; rehh_data = derive2 { name="rehh.data"; version="1.0.0"; sha256="1jkvwmnnmfa7iyvrabgcfzw3vfzx0dlgq47s6yf4zayi437v4di0"; depends=[]; }; + reinforcedPred = derive2 { name="reinforcedPred"; version="0.1.0"; sha256="1q83wnp935wr3z7rzfc6jrqm4p72diq1g0mdn69xnv2ljim4ps83"; depends=[glmnet MASS refund]; }; reinforcelearn = derive2 { name="reinforcelearn"; version="0.1.0"; sha256="025v8flr8q2p473kz760vywczhvx8b4lakm6rasr9ijgxpbd2jpn"; depends=[checkmate nnet purrr R6]; }; reinstallr = derive2 { name="reinstallr"; version="0.1.4"; sha256="1fcmy2cyqy4zwh815j2jbmziaiq6kypwsnj5bx0f10dlq3522m5q"; depends=[]; }; reinsureR = derive2 { name="reinsureR"; version="0.1.0"; sha256="19ayikzcq6z4i7xrlby76yy2nwvrsv6xdfrmvzyr7rz934flh8kd"; depends=[data_table dplyr ggplot2 viridis viridisLite]; }; @@ -10465,135 +10920,144 @@ in with self; { relevent = derive2 { name="relevent"; version="1.0-4"; sha256="10bf1s7jmas8ck1izqibqcaqg4z55ciwdpd9pm2697y8z0jhr2rj"; depends=[coda sna trust]; }; reliaR = derive2 { name="reliaR"; version="0.01"; sha256="000nafjp386nzd0n57hshmjzippiha6s6c4nfrcwl059dzmi088i"; depends=[]; }; relimp = derive2 { name="relimp"; version="1.0-5"; sha256="0ydn82g8xdqzhf34187080bbpcpw1zdjbj2i3dv1d6d35vvprb5c"; depends=[]; }; - relsurv = derive2 { name="relsurv"; version="2.1-2"; sha256="0hcvp1n8cvcnpqhwi1gcj3krzsarsk73ivwi75bvsvr3dpgxnwrm"; depends=[date survival]; }; - rem = derive2 { name="rem"; version="1.2.8"; sha256="1w0lkxjhyssl9343z6lw7dn0cazz9firglvcf74nls4ngkgv0bbd"; depends=[doParallel foreach Rcpp]; }; + relsurv = derive2 { name="relsurv"; version="2.2-2"; sha256="1r8gmqq4jnn697d4a6m48lf4kzkk6cq160ici60zfd7vb1b1y4vf"; depends=[date survival]; }; + rem = derive2 { name="rem"; version="1.3.1"; sha256="1q4p26irhhl1lvc0ydv9wmng1y635zm16szpl7gwq1kyn2p90rai"; depends=[doParallel foreach Rcpp]; }; remMap = derive2 { name="remMap"; version="0.2-0"; sha256="1k2niiaq2lr4inrx443clff9cqqvyiiwd45k7yqjd8ixnbaa3mrk"; depends=[]; }; rematch = derive2 { name="rematch"; version="1.0.1"; sha256="0y3mshvpvz9csmq8hk8jbabx4nxlv5sckvfzvm6920ndg34xw2d4"; depends=[]; }; rematch2 = derive2 { name="rematch2"; version="2.0.1"; sha256="16k0i5p7fa3qfxv59ijyn638wpz8n4jrkrnilqmh5g9l8f8bn4h6"; depends=[tibble]; }; remindR = derive2 { name="remindR"; version="0.0.1"; sha256="0b27v2qm3z8l9vcng8f0rkphjidxkw5n017ysflx180qjizqq632"; depends=[assertthat]; }; remote = derive2 { name="remote"; version="1.2.1"; sha256="1ihzjxbvas7396cwsi9am4pl94naxa9dnhbnh8k0l5p4a50mk33w"; depends=[gridExtra latticeExtra mapdata raster Rcpp scales]; }; remoter = derive2 { name="remoter"; version="0.4-0"; sha256="1a7m63l8phv5jnazvdqdrqkaqjwqzaac5y4jm2jn0ypy4n8jvkfl"; depends=[argon2 getPass pbdZMQ png]; }; - remotes = derive2 { name="remotes"; version="1.1.1"; sha256="07sxlwd09jzlfn7xakw9hwkr9k970lw2mnl0l3rpb5w71968km98"; depends=[]; }; + remotes = derive2 { name="remotes"; version="2.0.1"; sha256="1xkzlciv68jyf4j8hads0i47nxbgsy1kv7258c6zzyq66z0amhss"; depends=[]; }; renpow = derive2 { name="renpow"; version="0.1-1"; sha256="0kbfpzr17fvf5zzxpzdhvfmrqmlkba2w3rzxl5q5ac1w3h75gfhc"; depends=[]; }; rentrez = derive2 { name="rentrez"; version="1.2.1"; sha256="115ffrmsg755ynfwywql7xkcnlvv8ch4nlr1ab11i5923fz6vkvl"; depends=[httr jsonlite XML]; }; repeated = derive2 { name="repeated"; version="1.1.0"; sha256="0cdyzhhv89186q5nwablcjbqvm7ncq2w5d09iidbajrac9wd1y60"; depends=[rmutil]; }; + repec = derive2 { name="repec"; version="0.1.0"; sha256="0alr9fbmfxmnnnn1qymy65crcycynwz435jj0vangbb4p0qhv8pm"; depends=[jsonlite]; }; repfdr = derive2 { name="repfdr"; version="1.2.3"; sha256="0jpk44arg1jib0h2w90h851bs5cd1ss32fab9bfvf9iir2jk8985"; depends=[Rcpp]; }; repijson = derive2 { name="repijson"; version="0.1.0"; sha256="16iypvsmh5r9pk2k6npp17ya5dgkxihsj29pppd3zvdpm3vvd8k1"; depends=[geojsonio ggplot2 jsonlite OutbreakTools plyr sp]; }; replicatedpp2w = derive2 { name="replicatedpp2w"; version="0.1-2"; sha256="0nskwkqm9z2aphpim6pvykhc3fphlsbap3r49nghkwjpngd0qzj8"; depends=[spatstat spatstat_utils]; }; replicationInterval = derive2 { name="replicationInterval"; version="2.0.1"; sha256="1jyvyqr8r2fs1cmbz7zjcc8p116bnkslvx27pqi92y5pxgqvsqvr"; depends=[ggplot2 MASS MBESS pbapply]; }; - replyr = derive2 { name="replyr"; version="0.9.6"; sha256="1ffx8ziiiqpixabypk4lwnzvnrrylfl40rrjq4c3ys83gnbjm5n2"; depends=[DBI dplyr rlang wrapr]; }; + replyr = derive2 { name="replyr"; version="0.9.8"; sha256="086ck4vgjamifx621pkc9lyw96brvwhr1gfg4j5amg7r8llfws7r"; depends=[DBI dplyr rlang wrapr]; }; repmis = derive2 { name="repmis"; version="0.5"; sha256="0z5mjbsl24yjbl0aawr35grcal44rf2xbwv1hy7bdkms94ix79b5"; depends=[data_table digest httr plyr R_cache]; }; repo = derive2 { name="repo"; version="2.1.3"; sha256="1g72zvj2mg8cxfy1w3d46lkk4hayad64ns5w1y43731whzraxk95"; depends=[digest]; }; repolr = derive2 { name="repolr"; version="3.4"; sha256="13kmy09c7lk8p1mkdss0krcsfb6d7zcnqpwnl38zkanvh8q3fqhm"; depends=[Matrix Rcpp RcppArmadillo]; }; - reportROC = derive2 { name="reportROC"; version="3.0"; sha256="0jq3y1mia7nsnab14axyrvafw2b64g2zq25n42zplvm4pyfh1czr"; depends=[pROC]; }; + reportROC = derive2 { name="reportROC"; version="3.2"; sha256="1fskkligymxxfxbimd1sg1lhrd3pj62nkc41wpxfwacfr1zx57qb"; depends=[pROC]; }; reportReg = derive2 { name="reportReg"; version="0.2.0"; sha256="063z2szsainld9yb0hmpw23ij4d52qs6zjvdfdzj9h48qd50h38d"; depends=[nlme]; }; reportRx = derive2 { name="reportRx"; version="1.0"; sha256="0npiflql0lq8sqp6xgydxbw7xdr0zdxj1s2h4bnpmn4clc05r7m4"; depends=[aod cmprsk geoR reshape stringr survival xtable]; }; - reportr = derive2 { name="reportr"; version="1.2.2"; sha256="1fl4hy4ck4aapy152vn9gjd7w5vgvh2gz2ky6p0wwahah7m9b255"; depends=[ore]; }; + reportr = derive2 { name="reportr"; version="1.3.0"; sha256="0zynplxqvbmf23cm2rsz3wz2jx6mv55z94mn1k44ny3lx625cnpw"; depends=[ore]; }; reports = derive2 { name="reports"; version="0.1.4"; sha256="0r74fjmdqax2x5fhbkdxb8gsvzi6v794fh81x4la9davz6w1fnxh"; depends=[]; }; reporttools = derive2 { name="reporttools"; version="1.1.2"; sha256="1i87xmp7zchcb8w8g7nypid06l2439qyrvpwsjz6qny954w6fa2b"; depends=[xtable]; }; repr = derive2 { name="repr"; version="0.15.0"; sha256="0myg8d9idpp0gbi7nmcrjq3fa0zy4v73hkg6g5zlpw5vhsmvi8h0"; depends=[base64enc htmltools]; }; represent = derive2 { name="represent"; version="1.0"; sha256="0jvb40i6r1bh9ysfqwsj7s1g933d7z5fq9d618yjrqr6hbbqsvac"; depends=[]; }; represtools = derive2 { name="represtools"; version="0.1.2"; sha256="1zkabch49q23kd1786km5cb9wcaccbxds11v9hwjzsgrs15g5w35"; depends=[whisker]; }; - reprex = derive2 { name="reprex"; version="0.2.0"; sha256="1l44pxjiz3g0jkk3v6rg5jps3llihfiah0qyv40s0bxvxa6gm8v9"; depends=[callr clipr rlang rmarkdown whisker withr]; }; + reprex = derive2 { name="reprex"; version="0.2.1"; sha256="1ws5gds453xgfili87r35rz1wn2i7jbqissq98csbiddpkgls8sx"; depends=[callr clipr fs rlang rmarkdown whisker withr]; }; reproducer = derive2 { name="reproducer"; version="0.1.9"; sha256="092gz58sanpawgg0jk1634x9ki0jw460csbb6cywp0ndghswfgwh"; depends=[ggplot2 gridExtra lme4 MASS metafor openxlsx xtable]; }; - reproducible = derive2 { name="reproducible"; version="0.2.0"; sha256="0qaf9sx270hv73vggkschfwqvg39bmjvnz8wywvia722l3bjkh34"; depends=[archivist crayon data_table devtools digest dplyr fastdigest fasterize gdalUtils git2r googledrive httr magrittr memoise quickPlot R_utils raster Rcpp RCurl rgdal rgeos sf sp versions]; }; + reproducible = derive2 { name="reproducible"; version="0.2.3"; sha256="1cx6d07lsc6x122i1khgqfzh3nzxxfr4kxs0mjp0ghbsvnpk1rg9"; depends=[archivist backports crayon data_table devtools digest dplyr fastdigest fasterize gdalUtils git2r googledrive httr magrittr memoise quickPlot R_utils raster Rcpp RCurl rgdal rgeos sf sp versions]; }; repurrrsive = derive2 { name="repurrrsive"; version="0.1.0"; sha256="1ffldcs30xa4wcd825bgpcmqsndfyxx70dfmbb3c86ic9kq17p01"; depends=[tibble]; }; reqres = derive2 { name="reqres"; version="0.2.1"; sha256="056cjdx0nmf32vma2jkpbaznbaf76kc4jn0w6nv7blq33qlvx37z"; depends=[assertthat brotli jsonlite R6 stringi urltools webutils xml2]; }; request = derive2 { name="request"; version="0.1.0"; sha256="1q7zd6q00gdqmgq7s7nq1ixmns8zn2amr5zah9rwnsn8dkllj9yh"; depends=[curl httr jsonlite lazyeval magrittr R6 whisker]; }; requireR = derive2 { name="requireR"; version="1.0.0.1"; sha256="192l7i3q7s2a6n737an3fn258agjsdzh0q2w0vc8jbz7v4f3i92d"; depends=[]; }; rerddap = derive2 { name="rerddap"; version="0.4.2"; sha256="0jn5fqjjn4nqn6hyaiadq8xdg7vd23l09h9ax6nq8r5iiizpv249"; depends=[data_table digest dplyr hoardr httr jsonlite ncdf4 tibble xml2]; }; - rerf = derive2 { name="rerf"; version="1.0"; sha256="04q2g9pn34cvvzf790s6wlxd3v2qhwi7yx57cmm3h1ak9b4a6ics"; depends=[dummies Rcpp RcppArmadillo RcppZiggurat]; }; + rerf = derive2 { name="rerf"; version="1.1.3"; sha256="0mc55rwqbqxr655m6rgn5i63yg0pyn225yrmrd46b9h76j5hz3aj"; depends=[dummies Rcpp RcppArmadillo RcppZiggurat]; }; resample = derive2 { name="resample"; version="0.4"; sha256="1rckzm2p0rkf42isc47x72j17xqrg8b7jpc440kn24mqw4szgmgh"; depends=[]; }; - resampledata = derive2 { name="resampledata"; version="0.2.0"; sha256="1s683jhrpkhcn7cxjx5cipgkrbmhk5jr7hxniwc8ka7cbq3y22wl"; depends=[]; }; + resampledata = derive2 { name="resampledata"; version="0.3.0"; sha256="09hp97zk31f016d65vq64gv413c6bx1dwqy74ai34xk00flkwady"; depends=[]; }; resemble = derive2 { name="resemble"; version="1.2.2"; sha256="189a6b1y720w9ff8cyqazd2d3v1msbfw8zdqr5rmilxvxmnspccs"; depends=[foreach iterators Rcpp RcppArmadillo]; }; reservoir = derive2 { name="reservoir"; version="1.1.5"; sha256="1qvjq8j2gxp6b8m3k3822f9na8a1kbwzzsmq70m763dcq293rgiz"; depends=[gtools]; }; - reshape = derive2 { name="reshape"; version="0.8.7"; sha256="14ir3w4bb3bsz8jsak27nj7kpn227pdgr9653gjq5wc93rywi9ig"; depends=[plyr]; }; + reshape = derive2 { name="reshape"; version="0.8.8"; sha256="0s6i0sqxg1vldxs6miv8mi0zydxbqzgpmzfiwkj8y7jix3yrfmad"; depends=[plyr]; }; reshape2 = derive2 { name="reshape2"; version="1.4.3"; sha256="03ki5ka1dj208fc0dclbm0b4xp9d769pah2j9cs34l776p4r9zwa"; depends=[plyr Rcpp stringr]; }; reshapeGUI = derive2 { name="reshapeGUI"; version="0.1.0"; sha256="0kb57isws8gw0nlr6v9lg06c8000hqw0fvhfjsjyf8w6zwbbq3zs"; depends=[gWidgets gWidgetsRGtk2 plyr reshape2]; }; - respirometry = derive2 { name="respirometry"; version="0.6.0"; sha256="0dglmf3m8wpqs3jlza6lj8hamb1j1h8b85a4bfrcwkyap7pggcc5"; depends=[birk lubridate marelac measurements seacarb]; }; + respirometry = derive2 { name="respirometry"; version="0.7.0"; sha256="1anmi0pc54gbrbwcpx7sn8p2cqpyf7d5bf3v9zp4mzy4g7nx7vvj"; depends=[birk lubridate marelac measurements seacarb segmented]; }; restfulr = derive2 { name="restfulr"; version="0.0.13"; sha256="1dk45mzrr6ka92yjz7hfhkj12kpx1wg4szv1h1mg80mgga4ganbv"; depends=[RCurl rjson S4Vectors XML yaml]; }; restimizeapi = derive2 { name="restimizeapi"; version="1.0.0"; sha256="1ss6fng5pmqg6cafc256g9ddz8f660c68ysxfan6mn4gdaigz7lb"; depends=[RCurl RJSONIO]; }; restlos = derive2 { name="restlos"; version="0.2-2"; sha256="083w1ldax8bnf3w4119damma2nz75c3ki187b0275i1mqxqrixp7"; depends=[geometry igraph limSolve rgl som]; }; restrictedMVN = derive2 { name="restrictedMVN"; version="1.0"; sha256="0qynkg244gzq0yjb0716w7g1sxdq66i11ss8jij86h2mz3ykj137"; depends=[MASS]; }; - restriktor = derive2 { name="restriktor"; version="0.1-80.711"; sha256="10kbfr7gzah119xm4cnx7br9i9fcga38kymjajw7m2571f4jsji9"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; + restriktor = derive2 { name="restriktor"; version="0.1-80.811"; sha256="0yyaiv5777apf2hwf7kyhya9pxkqvsj94shn310dl7gfxks5bvqd"; depends=[boot ic_infer lavaan MASS mvtnorm quadprog]; }; resumer = derive2 { name="resumer"; version="0.0.3"; sha256="0ilya3v75989zqm16x69w4599ax2s5j2n6f16bmhwydrmzxs1g48"; depends=[dplyr rmarkdown useful]; }; rethinker = derive2 { name="rethinker"; version="1.1.0"; sha256="02zfx08s5xisv1v4y16iqbddi9kb3fcr249b3414fzvs4nm5as94"; depends=[rjson]; }; - reticulate = derive2 { name="reticulate"; version="1.8"; sha256="0zwb4ikf021nw7axdn7qlr6bq4xkph3anfy314idkspy1iil4nmr"; depends=[jsonlite Matrix Rcpp]; }; + reticulate = derive2 { name="reticulate"; version="1.10"; sha256="0bz3lxbisjwn6cv23090zivpy0bxcncr82g5qja13l37i8xnvqsq"; depends=[jsonlite Matrix Rcpp]; }; retimes = derive2 { name="retimes"; version="0.1-2"; sha256="019sllyfahlqnqry2gqw4w5cy4cavrqnwpwrbb25cgjpdb19raja"; depends=[]; }; retistruct = derive2 { name="retistruct"; version="0.5.12"; sha256="11m4i29i3zqh9chyjgdhzqj4yqlslfm8y4q0x14xxc2r9lqbkj9l"; depends=[foreign geometry png R_matlab rgl RImageJROI RTriangle sp ttutils]; }; reutils = derive2 { name="reutils"; version="0.2.3"; sha256="09dhf4s7wz3anrkzqi16abx64gk8ck2142kfd8pv71mjy3x548l7"; depends=[assertthat jsonlite RCurl tibble XML]; }; reval = derive2 { name="reval"; version="2.0.0"; sha256="1yxkyc6wdp5h3cp8i42a9cf0b1cwr4nmpd7svlp7bpfxlcnqqa0d"; depends=[doParallel foreach]; }; revdbayes = derive2 { name="revdbayes"; version="1.3.2"; sha256="09xxy3yk2fwd0113dgsz0kd2k1k1ghjv9ay2n03b5cnxqaksa99s"; depends=[bayesplot Rcpp RcppArmadillo rust zoo]; }; + revealedPrefs = derive2 { name="revealedPrefs"; version="0.4"; sha256="1xd1bvji99mgnz772naz95i0xnrvqdkwxjj7mjblk2qdym95s1d0"; depends=[pso Rcpp RcppArmadillo]; }; revealjs = derive2 { name="revealjs"; version="0.9"; sha256="0h4csxrcl1rzmj3g01nf0mr990zc8swrf4jvmxwqsyzx9v2cqbnc"; depends=[rmarkdown]; }; - revengc = derive2 { name="revengc"; version="1.0.0"; sha256="0ccbw61xqjf9y15ghhzx57q3l48xpw9pq2nb11nrqapp5w3f9vzy"; depends=[stringr]; }; + revengc = derive2 { name="revengc"; version="1.0.3"; sha256="0hls00hnwq9f72v4dnaqsmz81lzddvma81p38qrl85v792l16q61"; depends=[dplyr mipfp stringr truncdist]; }; revgeo = derive2 { name="revgeo"; version="0.15"; sha256="1ns7d1817475lriss6wwgvdm6lj760p40yxqaifla13c2xb73a55"; depends=[RCurl RJSONIO]; }; revtools = derive2 { name="revtools"; version="0.2.2"; sha256="0sn7k5vcp09vp6j1bf879jrig382ayhfnwp569z9dxgdh7s18v6n"; depends=[ade4 modeltools plotly shiny shinydashboard SnowballC stringdist tm topicmodels viridisLite]; }; reweight = derive2 { name="reweight"; version="1.2.1"; sha256="0fv7q1zb3f4vplg3b5ykb1ydwbzmiajgd1ihrxl732ll8rkkfa4v"; depends=[]; }; rex = derive2 { name="rex"; version="1.1.2"; sha256="0alsadgjgass3wr8y5d247j12qqzg454sc84vpskclrkmz778g5x"; depends=[lazyeval magrittr]; }; - rexpokit = derive2 { name="rexpokit"; version="0.26.3"; sha256="0af9h7p4gx627iin3l8hbwhkf7yfdrr900a1rq8ib9p4ip7inxmd"; depends=[Rcpp]; }; - rfPermute = derive2 { name="rfPermute"; version="2.1.5"; sha256="0c7yi395j640mvnr1qlm9hy1w6vva33fa2lqb3amzkafy4j1cs63"; depends=[abind ggplot2 gridExtra randomForest reshape2 swfscMisc]; }; + rexpokit = derive2 { name="rexpokit"; version="0.26.6"; sha256="06h2k1jzn9rvbgyhhgnshwdajl9psks1sx09108appyf7sqlb9bp"; depends=[Rcpp]; }; + rfPermute = derive2 { name="rfPermute"; version="2.1.6"; sha256="198vvf8jdcjiv55hmlzd4f9jwr55yxk8m3s6dr9lkcq5r4h6xmrk"; depends=[abind dplyr ggplot2 gridExtra magrittr plyr randomForest reshape2 rlang scales swfscMisc tibble tidyr viridis]; }; rfUtilities = derive2 { name="rfUtilities"; version="2.1-3"; sha256="0vnhvdkqqqn894abznw97j07gwdvvmvk8vsf4aaxx9yzk44cnk5g"; depends=[cluster randomForest]; }; + rfacebookstat = derive2 { name="rfacebookstat"; version="1.8.3"; sha256="1a9xj0hpbvjp70v8rim0vpqpdjf6x81jw47nzjl9iggny3c1nb1m"; depends=[bitops data_table dplyr httr jsonlite RCurl]; }; rfbCNPJ = derive2 { name="rfbCNPJ"; version="0.1.1"; sha256="0zvpazxi184ia2wql0120kw7665dn9cs8a2kv91n79pncabb4xfg"; depends=[fs glue httr magrittr progress purrr readr stringr tibble xml2]; }; rfigshare = derive2 { name="rfigshare"; version="0.3.7"; sha256="1qgzn0mpjy4czy0pnbi395fxxx84arkg8r7rk8aidmd34584gjiq"; depends=[ggplot2 httpuv httr plyr RJSONIO XML yaml]; }; rfishbase = derive2 { name="rfishbase"; version="2.1.2"; sha256="1w8jk6qfhyzzmxf8qnqqwckm4syrqimi8k6dqmwflgxz6bsxcz0v"; depends=[dplyr httr lazyeval tidyr]; }; rfisheries = derive2 { name="rfisheries"; version="0.2"; sha256="16j3hn1py8khqadmh81qsg76c62wzqkaq3fn39z0z5mgynmcm62j"; depends=[assertthat data_table ggplot2 httr rjson]; }; rfm = derive2 { name="rfm"; version="0.1.0"; sha256="0bd71qk6vrd0jnnwdwlh30mn8v8dwwgmffrd71kbq83gbfp8ry3l"; depends=[assertthat dplyr forcats ggplot2 lubridate magrittr purrr RColorBrewer rlang shiny tidyr]; }; rfml = derive2 { name="rfml"; version="0.1.0"; sha256="133adpfjpp14m47841k6ybq9lrvby9bxgr5zs4i3akjr2575nq1j"; depends=[httr jsonlite PKI XML]; }; - rfoaas = derive2 { name="rfoaas"; version="1.1.1"; sha256="1rglqmbhnasc3ciypms3qqgfaj19202cnqdimsi69lvig2rnkca5"; depends=[httr]; }; + rfoaas = derive2 { name="rfoaas"; version="2.0.0"; sha256="04wx3d6v9zci6i5k3c4nfdycgjmng7f533b9k84kf1pa4lwp45ad"; depends=[httr]; }; rfordummies = derive2 { name="rfordummies"; version="0.1.3"; sha256="13jqvww65wzac1c8ajkljz89vi4j76y9ga52w3ygajjzg0rn15l5"; depends=[]; }; rforensicbatwing = derive2 { name="rforensicbatwing"; version="1.3.1"; sha256="1i521h2nmlkhcxfxqir8jfjv0llwr6cz0ck5w6hzplk48044bn16"; depends=[Rcpp]; }; rgabriel = derive2 { name="rgabriel"; version="0.7"; sha256="1c6awfppm1gqg7rm3551k6wyhqvjpyidqikjisg2p2kkhmyfkyzx"; depends=[]; }; rgam = derive2 { name="rgam"; version="0.6.6"; sha256="0klf2prw5zj76az66c5hzv23yya1b45l61xdy1zbnggvwh62fqik"; depends=[Rcpp RcppArmadillo]; }; - rgbif = derive2 { name="rgbif"; version="1.0.0"; sha256="1bjapaxp84rm8p7qp3w814b80h2s2m9zpnah85xyg27ba26jixnz"; depends=[crul data_table geoaxe ggplot2 jsonlite lazyeval magrittr oai tibble whisker wicket xml2]; }; + rgbif = derive2 { name="rgbif"; version="1.1.0"; sha256="1rn4gpl5paf8qmk535y1gg81xdnlglm70spvw2y72kvdl5jyrzhl"; depends=[crul data_table geoaxe ggplot2 jsonlite lazyeval magrittr oai tibble whisker wicket xml2]; }; rgcvpack = derive2 { name="rgcvpack"; version="0.1-4"; sha256="1vlvw9slrra18qaizqk2xglzky0i6z3bsan85x908wrg8drss4h5"; depends=[]; }; - rgdal = derive2 { name="rgdal"; version="1.3-3"; sha256="06dvybwz6rgnqhkc05jgi1j9j0bc8hnwrsz5gs1p3xkbxk9fvr0z"; depends=[sp]; }; + rgdal = derive2 { name="rgdal"; version="1.3-6"; sha256="07yq2bcgjr8my9120v451r567wkxqzh2fqhxmy5iy91aik5bhhxm"; depends=[sp]; }; rgdax = derive2 { name="rgdax"; version="0.6.0"; sha256="0kls1v9i3fhiyfns41nqqyz4spf5449hc624vwdw86sgbc1w30w8"; depends=[digest httr jsonlite RCurl]; }; rgen = derive2 { name="rgen"; version="0.0.1"; sha256="0gl82v09q1ha58wd1014s46wzkx1yf348bc7jkl6s4qdc6c4vsb8"; depends=[]; }; rgenoud = derive2 { name="rgenoud"; version="5.8-2.0"; sha256="0ffjw8kqmi0zkbskyw3h38a8iapv7hdi9819x5w9a5gmdmm4yv0h"; depends=[]; }; rgeoapi = derive2 { name="rgeoapi"; version="1.1.0"; sha256="0k8p1l0vrgx0bifbc2i9gxxwih513vbqhjh7fiifyfq3r74i4j7k"; depends=[httr magrittr rjson]; }; rgeolocate = derive2 { name="rgeolocate"; version="1.0.1"; sha256="1v9kd71wpxna1war0rbp91pc5wdqlganmj2c2fc5m5176dnxd2v3"; depends=[httr Rcpp]; }; - rgeopat2 = derive2 { name="rgeopat2"; version="0.2.5"; sha256="1zdjnbdxj6yfmb5dl4ajlcklgh0iw17ji3arl0wf9j61pw45kk17"; depends=[readr sf stringr]; }; - rgeos = derive2 { name="rgeos"; version="0.3-28"; sha256="1dfbphf5g4ggd109j7qh4cycxgslppnja8d4ibwajkfgd3f6iq0q"; depends=[sp]; }; + rgeopat2 = derive2 { name="rgeopat2"; version="0.2.6"; sha256="04r8q3mig7sp38f3m9g20xlb0h046c04hhrzg4n06b5wkn7298s5"; depends=[readr sf stringr]; }; + rgeos = derive2 { name="rgeos"; version="0.4-1"; sha256="1zash6cfq6wlk1gn30al9gvb5im1kgl2yw2isrc06nnd4cxjaswd"; depends=[sp]; }; rgexf = derive2 { name="rgexf"; version="0.15.3"; sha256="0iw1vk32ad623aasf6f8hl0qkj59f1dsc2riwqc775zvs5w7k2if"; depends=[igraph Rook XML]; }; - rggobi = derive2 { name="rggobi"; version="2.1.21"; sha256="0zi4rhggngm0y8dsjxqlr2mmfc5wzi7l1qcp5gin4bjlbyf8yb3z"; depends=[RGtk2]; }; + rggobi = derive2 { name="rggobi"; version="2.1.22"; sha256="1g7k4xais9xkjlbvrkadr5d6c5rw4jp9c0gljhm71pa1fc9fcqff"; depends=[RGtk2]; }; rgho = derive2 { name="rgho"; version="1.0.1"; sha256="0jkfmyn3i50vsqciy96wd2fpik6yfg0sz6rrhwb04jv1dmyz2nfa"; depends=[curl dplyr httr jsonlite lazyeval magrittr memoise readr tibble tidyr]; }; rgl = derive2 { name="rgl"; version="0.99.16"; sha256="0q8sg8fr0140ilssqhscaxkjc29w1rpp6f4k50amw3zzs9g58ak9"; depends=[crosstalk htmltools htmlwidgets jsonlite knitr magrittr manipulateWidget shiny]; }; rglobi = derive2 { name="rglobi"; version="0.2.14"; sha256="09f4v98m68ssnf1n0ijsrzawpri3jhv4bz7gzzzpijb75mkb0zwz"; depends=[RCurl rjson]; }; rglwidget = derive2 { name="rglwidget"; version="0.2.1"; sha256="0siqxn3gyl98i84p0yha821b4rdrp2i0942mkx819wnf7qwrpqcv"; depends=[rgl]; }; + rgoogleslides = derive2 { name="rgoogleslides"; version="0.3.1"; sha256="06i1ljrib0ap87bxlbpnvx5fr05pwzcmza48gbicvg7fwhz9hs05"; depends=[assertthat httr jsonlite R6]; }; rgr = derive2 { name="rgr"; version="1.1.15"; sha256="1mrnmbh2crhkwdi37q59hx76afvkhgzgaacg3688q7jp23d58z6x"; depends=[fastICA MASS]; }; - rgrass7 = derive2 { name="rgrass7"; version="0.1-10"; sha256="0w5vy8163xlfmdrpyp00x25wwq4jnaspzggpvj160azigndsc1kr"; depends=[sp XML]; }; + rgrass7 = derive2 { name="rgrass7"; version="0.1-12"; sha256="1gsy45j6nq4i6lbr4gyhgmnc9l8g6qxbhsqby9r59d6xz49b2xlv"; depends=[sp XML]; }; + rgsp = derive2 { name="rgsp"; version="0.2.0"; sha256="1fk0k479srfr0f4a5abyzcrzwy9hr1v5xf0jgs36fbim9bh7njlc"; depends=[dplyr magrittr tibble]; }; rgw = derive2 { name="rgw"; version="0.1.0"; sha256="12f7bsfg24cld9y47jyqxswgc1bk4adbhhdpycapinbcfhyzc91p"; depends=[]; }; rhandsontable = derive2 { name="rhandsontable"; version="0.3.6"; sha256="1n631vffbfi8mgbcjgav1209ryj88igb17h73xvjdmglh5f0s6dz"; depends=[htmlwidgets jsonlite magrittr]; }; + rhierbaps = derive2 { name="rhierbaps"; version="1.1.0"; sha256="0c18xa6ikgs1j1xn1f9q3angqki7iwzfnq1kzdcgk0rvxkcn1rir"; depends=[ape ggplot2 LambertW matrixStats purrr]; }; + rhli = derive2 { name="rhli"; version="0.0.2"; sha256="1mb6bizqkg7zd8nc5a81fw7d0y0vcv6zh6y28k9vikqmc5l1n21q"; depends=[]; }; + rhmc = derive2 { name="rhmc"; version="1.0.0"; sha256="1m79f1hx404y0k8lk3n6jnzhr6wwrk83xiym68sq1zvj0wjqiqmw"; depends=[]; }; rhmmer = derive2 { name="rhmmer"; version="0.1.0"; sha256="0875b29i8rl9iypxp7vw514avq0ac4abdlfq3861cdd3kgycw8jh"; depends=[dplyr magrittr readr rlang tidyr]; }; rhnerm = derive2 { name="rhnerm"; version="1.1"; sha256="1fkh2pr4kzvqvagdyjlyab7p591s913104gyq05q170gmvlpmiww"; depends=[]; }; - rhoR = derive2 { name="rhoR"; version="1.1.0.0"; sha256="00djh16s144a9cl2z8zm3za1bsnpzd3i5b9nyqad10xlkgll36li"; depends=[]; }; - rhosp = derive2 { name="rhosp"; version="1.07"; sha256="09wq96micv9wpr3sx8ir7frkanpy3zi3mwn6rbixw2kxvn5wkkfn"; depends=[]; }; + rhoR = derive2 { name="rhoR"; version="1.2.0.0"; sha256="04v4cb811d1px7k0afa1x4ixkj8q8syr1rhqgf6j801nqn0dvq8v"; depends=[]; }; + rhosp = derive2 { name="rhosp"; version="1.10"; sha256="1k0rb4fchjlzinky6ysdvyk0xjsx5986aqwn3yc6s7m3v7y9wb9m"; depends=[]; }; rhub = derive2 { name="rhub"; version="1.0.2"; sha256="18aq28q4vggbp19l9wcw3dylnyv7sd26wg0i5w8jrva5cq1v2n5j"; depends=[assertthat callr clisymbols crayon desc httr jsonlite parsedate prettyunits R6 rappdirs rcmdcheck rematch whoami withr]; }; rhymer = derive2 { name="rhymer"; version="1.0.0"; sha256="1k15sd5q6a1ijayl585vc54d1zs4nyrxsfck9bn4nlfdiwc5arwf"; depends=[httr jsonlite]; }; ri = derive2 { name="ri"; version="0.9"; sha256="00y01n9cx95bjhdpnh7vi0xd5p6al3sxbjszbyxafn7m9mygmnhv"; depends=[]; }; ri2 = derive2 { name="ri2"; version="0.1.1"; sha256="01iyk9cfs6v7jd1z962vrcdb3bfab5pcq9abkb21yqi82f9w97jf"; depends=[estimatr ggplot2 pbapply randomizr]; }; riceware = derive2 { name="riceware"; version="0.4"; sha256="0pky0bwf10qcdgg9fgysafr35xbmnr9q0jbh56fawj99nbyj3m70"; depends=[random]; }; rich = derive2 { name="rich"; version="1.0.1"; sha256="0kasr9gb85qhngfayqy3fvrsr0a066krwxsx21nsxcnss0mrqygr"; depends=[boot vegan]; }; - ridge = derive2 { name="ridge"; version="2.2"; sha256="01yldzzlqg0xqha31l3py62lyq7fw5xfsbmz6ifzff24gqsf029x"; depends=[]; }; + ridge = derive2 { name="ridge"; version="2.3"; sha256="15m9klxcxj33s8wkxyamc4awzarg2ncahgaz5cg5m926g8haz9c8"; depends=[]; }; ridigbio = derive2 { name="ridigbio"; version="0.3.5"; sha256="0526nscxynl3857zybpms1wr3230qby29kxglm919pcdvpjb5kz5"; depends=[httr jsonlite plyr]; }; ridittools = derive2 { name="ridittools"; version="0.1"; sha256="1m9xbwxb277l4cd85qxmpw66gyavpwamgwr8kyf8vqarzfbwiilr"; depends=[]; }; riem = derive2 { name="riem"; version="0.1.1"; sha256="0lwhsxb4pm26kb65hs8pa63bsbrgy0zchqm4i6pq9f2r9h8vsm1m"; depends=[httr jsonlite lubridate tibble]; }; rif = derive2 { name="rif"; version="0.2.0"; sha256="0vk3dmg3qzw3i27wbpfih66rx8sdxq033l7h59h3hy960av4hawh"; depends=[crul data_table jsonlite tibble]; }; + rifle = derive2 { name="rifle"; version="1.0"; sha256="1r0cfj3vzndgiarl9sb38zmpnpm4p8v9l5cm9c1m6g2q9kvpgpbs"; depends=[MASS]; }; riingo = derive2 { name="riingo"; version="0.1.0"; sha256="1lkg0xmy3mhx99ywbvkmnkj6i61r5x75g4fnnwj6vdyslvwf3s5x"; depends=[crayon glue httr jsonlite purrr rlang tibble]; }; rijkspalette = derive2 { name="rijkspalette"; version="1.0.0"; sha256="15yn4sp4p4gcm94clyrijp5mxiz2xcslsq2a8x5x2la1l91kf70i"; depends=[crayon curl imager jsonlite]; }; rinat = derive2 { name="rinat"; version="0.1.5"; sha256="14ql90f8wrxz9nlykbzfpar1yfwh7p71vks7vhhn8ys09wvj30zk"; depends=[ggplot2 httr jsonlite maps plyr]; }; - rindex = derive2 { name="rindex"; version="0.12"; sha256="1k9zihvrp955c4lh70zjlsssviy2app8w6mv5ln4nawackbz0six"; depends=[regtest]; }; + rindex = derive2 { name="rindex"; version="0.12.1"; sha256="0q86dvgmrgm94l05inapm7kbgzlmm1xh3x8plvir43rx6gq0am4h"; depends=[regtest]; }; ring = derive2 { name="ring"; version="1.0.0"; sha256="03sbgxwzms20gp0hkm5s0dihqkx3qf6bw0jrays7jjzrrwzl5657"; depends=[R6]; }; rintrojs = derive2 { name="rintrojs"; version="0.2.0"; sha256="0qdry88f6ci5g6k0i8mycm9k5ibnmb9zjppjvqqaflw3g3nsnli2"; depends=[jsonlite shiny]; }; rio = derive2 { name="rio"; version="0.5.10"; sha256="158xg3vj0glk3fslwi6fywwmfym2b6kn3fdmjligdfy5lf68khix"; depends=[curl data_table foreign haven openxlsx readxl tibble]; }; rioja = derive2 { name="rioja"; version="0.9-15.1"; sha256="18fyqcykg12mf4ap0a2la30656xq32immqz11ddmrfrb0vpd2h7h"; depends=[mgcv vegan]; }; ripa = derive2 { name="ripa"; version="2.0-2"; sha256="0n1gaga0d4bb9qdlm7gksa1nwi4y28kbgwr3icwqgihf1bfb9m81"; depends=[Rcpp]; }; + rise = derive2 { name="rise"; version="1.0.4"; sha256="12r7mbaxp9pjypbpjxlsbqg7spw80gjgm2w0lsvgvclffc50a6ni"; depends=[dplyr ggplot2]; }; riskR = derive2 { name="riskR"; version="1.1"; sha256="1qadfyb07idfw0bs006kb3917rzda83di6jmsr22941gv78z1wyv"; depends=[]; }; - riskRegression = derive2 { name="riskRegression"; version="2018.04.21"; sha256="0jyk5pdgr8wqyfxzwbmanqp7ff0fkw3nlz7dx19rqxji1lnj74qa"; depends=[abind cmprsk data_table doParallel foreach ggplot2 lava plotrix prodlim Rcpp RcppArmadillo rms survival timereg]; }; + riskRegression = derive2 { name="riskRegression"; version="2018.10.03"; sha256="1j0q0a9rkh9gmcidl6kwlmiiwn24cxg9yrx0i72py1b2765kqwk2"; depends=[abind cmprsk data_table doParallel foreach ggplot2 lava plotrix prodlim ranger Rcpp RcppArmadillo rms survival timereg]; }; riskSimul = derive2 { name="riskSimul"; version="0.1"; sha256="0s2a1mn6g11m96gqscb916caj2aykcs3rkacpqcdnlyzryk1gsnb"; depends=[Runuran]; }; risksetROC = derive2 { name="risksetROC"; version="1.0.4"; sha256="1fh0jf8v536qzf1v3awx3f73wykzicli4r54yg1z926ccqb4h80l"; depends=[MASS survival]; }; riskyr = derive2 { name="riskyr"; version="0.1.0"; sha256="1s6yrij5d1vhvzc7nnajjnjmxnhrs0r1psppcvwb0qg3ff181y22"; depends=[diagram vcd]; }; - rite = derive2 { name="rite"; version="0.3.4"; sha256="196ashcfj5p52qpnpnrkg7vxq87v7vhf1d7z40mk134gmxk2784j"; depends=[knitr markdown RCurl tcltk2]; }; ritis = derive2 { name="ritis"; version="0.7.2"; sha256="1bn7nfgg9f2y19fp747k96r9kmnrfsqib81a9rzbwv4b97ymg31s"; depends=[crul data_table jsonlite solrium tibble]; }; riv = derive2 { name="riv"; version="2.0-5"; sha256="0n19jlrs12iysq45xyi3zvghkircg0ww5vbsfpnqkw5b22zsv30s"; depends=[MASS quantreg rrcov]; }; riverdist = derive2 { name="riverdist"; version="0.15.0"; sha256="145mvqnhv12dcvss54wdycgb3wwk95phl4kx5z0jnh3kmm1zsdl4"; depends=[rgdal sp]; }; @@ -10602,10 +11066,10 @@ in with self; { rivervis = derive2 { name="rivervis"; version="0.46.0"; sha256="19jsl5g46jcbc0kg47bsif1wrw9z9brgvwdcxqjc89shnx3hzzfv"; depends=[]; }; rivr = derive2 { name="rivr"; version="1.2"; sha256="0ankpfixggwdv17ba8i5iln0zzmngqrhvh3dg8lis9kqg6wa89yr"; depends=[Rcpp]; }; rjade = derive2 { name="rjade"; version="0.1"; sha256="0f1jljj6m1almz0na984n0g314y0rl6a0mx04rbrpipgfgz1h37c"; depends=[V8]; }; - rjags = derive2 { name="rjags"; version="4-6"; sha256="1bc9bzq31liawg3nzwfczf75vgg56fnqjw0997xvlic4ghgbn96g"; depends=[coda]; }; + rjags = derive2 { name="rjags"; version="4-8"; sha256="17xmjksj69f9wk4x71jxk4cgiqhaf2fj6bjm0mgzp4qln5x84a8m"; depends=[coda]; }; rjazz = derive2 { name="rjazz"; version="0.1.7"; sha256="0wmqlpgcr98dvapfmdcph5mdv202rzzsvb06iy5sqvpizpg7pbsz"; depends=[RCurl]; }; rje = derive2 { name="rje"; version="1.9"; sha256="1dyd34z6lb0p6zmyax5dpzflgc9a4saka33mvdfcxi5pj0rnygaz"; depends=[]; }; - rjmcmc = derive2 { name="rjmcmc"; version="0.4.1"; sha256="0ww94zdrxdyznpsfxy5fr65w1qjxxr5zignj4bw4291694vfazw1"; depends=[coda madness mvtnorm]; }; + rjmcmc = derive2 { name="rjmcmc"; version="0.4.3"; sha256="0y2bcfkczlmfnkwmpxa8b65jmfp4pv071wsijv7x4pis28v3mvlr"; depends=[coda madness mvtnorm]; }; rjson = derive2 { name="rjson"; version="0.2.20"; sha256="0v1zvdd3svnavklh7y5xbwrrkbvx6053r4c5hgnk7hz7bqg7qa1s"; depends=[]; }; rjsonapi = derive2 { name="rjsonapi"; version="0.1.0"; sha256="0qshll0y8b6lbfrqmp69w9kc9hgfrz94dk68nddshk9ilg14lx4d"; depends=[crul jsonlite plumber R6]; }; rjstat = derive2 { name="rjstat"; version="0.3.0"; sha256="0r772p0a0x6g96k6r26vb6vjxa68mzjslwg71r0wysa9kqhvypm4"; depends=[checkmate jsonlite]; }; @@ -10614,47 +11078,51 @@ in with self; { rknn = derive2 { name="rknn"; version="1.2-1"; sha256="1x9r01314q0wgqwqzd7d13ycjzb4jzghzd3whgjvm2rsmnabai95"; depends=[gmp]; }; rkt = derive2 { name="rkt"; version="1.5"; sha256="1rgf7dnk4d1b46rns2mb2s1ilxq7hqrh057vrrl00324r4h8bs1k"; depends=[]; }; rkvo = derive2 { name="rkvo"; version="0.1"; sha256="0ci8jqf9nc8hb063nckxdnp0nlyr4ghby356lxm00anw44jlmw8v"; depends=[Rcpp]; }; - rlang = derive2 { name="rlang"; version="0.2.1"; sha256="0ghg66vyri8nck4p6kl1nh47qdppbmxvjiyms69nhvipphk4ifpj"; depends=[]; }; - rlas = derive2 { name="rlas"; version="1.2.4"; sha256="12siq75a4dwyfypyrz8550wj6xjjwfs99kxaglx39c8wc0z64wmy"; depends=[data_table Rcpp uuid]; }; + rlang = derive2 { name="rlang"; version="0.3.0.1"; sha256="0j7kp6h25wbkvpzr7dpc0zgdpjiwsjjlgprj3mv7bgfalfq1si99"; depends=[]; }; + rlas = derive2 { name="rlas"; version="1.2.9"; sha256="025hh6fv2kpgi7jvgmjdmh26smhpfaxisj1gq5jcc6xl02jxhpp0"; depends=[BH data_table Rcpp rgeos sf sp uuid]; }; rld = derive2 { name="rld"; version="1.0"; sha256="1glv4q25z14hcwifwg623h77p4awpsn3nk843pnph4sb3p5qbmn3"; depends=[emdbook MASS survival]; }; rleafmap = derive2 { name="rleafmap"; version="0.2"; sha256="1i2qczipg7lr6fl35lcl896r54jia7libxx83darrfzc1hd9sdcq"; depends=[knitr raster sp]; }; rlecuyer = derive2 { name="rlecuyer"; version="0.3-4"; sha256="0d5mcdzn6f5nhwzs165a24z36d0b8gd0cyfyzffvr6p96h8qydy7"; depends=[]; }; rlfsm = derive2 { name="rlfsm"; version="0.2.0"; sha256="08fdllzk5q77fz6ii83vbmz8dnfwwr3ixs11ia2l1vrm1gdj9gf7"; depends=[doParallel elliptic foreach ggplot2 plyr Rdpack reshape2 stabledist]; }; rlist = derive2 { name="rlist"; version="0.4.6.1"; sha256="08awy2p7rykc272wvvya4ddszbr7b7s7qv4wr3hs8ylr4jqlh0dv"; depends=[data_table jsonlite XML yaml]; }; rlm = derive2 { name="rlm"; version="1.2"; sha256="18y735z05k9pms6iv1739qg3q12w099qhs42icxhqs5gcdhz92fm"; depends=[]; }; + rlmDataDriven = derive2 { name="rlmDataDriven"; version="0.1.0"; sha256="1nfa7ivvrmvw91n77dhx128xxhgv031dzvc8cqb7mzz48lwa225n"; depends=[MASS]; }; rlme = derive2 { name="rlme"; version="0.5"; sha256="0p26mw4g12l279lh80vqcjs3pvjr759ap2m622490k1i2ralxzif"; depends=[magic MASS mgcv nlme quantreg Rcpp robustbase stringr]; }; rlo = derive2 { name="rlo"; version="0.3.2"; sha256="0abq42dhapzmh6hvmildbn8zya29c6p1aqbv8avc03g014dwbrd0"; depends=[PythonInR]; }; - rly = derive2 { name="rly"; version="1.6.1"; sha256="13l1ya0f8mbpwainzs1rbl9zjhf3wxrcfkf0xnj9wybs34k9qzxj"; depends=[futile_logger R6]; }; + rly = derive2 { name="rly"; version="1.6.2"; sha256="1bb55g3rip524dccaxvahjxsi2cimxqvzc897pxplv3bb10pm0r2"; depends=[futile_logger R6]; }; rma_exact = derive2 { name="rma.exact"; version="0.1.0"; sha256="1igs92la79akyqj84ah23lpcay7i33k7zgzcwm7sii782fhirivx"; depends=[abind metafor]; }; rmaf = derive2 { name="rmaf"; version="3.0.1"; sha256="0w247mamwgibr5576p5c2lzaiz2lv2c25n7gw9q99s7rc4bps7j7"; depends=[]; }; - rmake = derive2 { name="rmake"; version="1.0.0"; sha256="1qvbyd68p37nsqrm77w18znsa6m629qzyd7sl8w98p654pqmjhdw"; depends=[assertthat pryr rmarkdown]; }; - rmapshaper = derive2 { name="rmapshaper"; version="0.4.0"; sha256="0a911f6q9czni6zpijp63rngnil7jkbcy9f7jz55jr225fgm6g6z"; depends=[geojsonio geojsonlint jsonlite readr sf sp V8]; }; - rmapzen = derive2 { name="rmapzen"; version="0.3.5"; sha256="0n549y6j056cl7c7pdcn9pixhvs8vpwqg50m380pchbxhxnfjvbq"; depends=[assertthat digest dplyr geojsonio httr jsonlite maps maptools purrr rgdal sf sp tibble tidyr]; }; + rmake = derive2 { name="rmake"; version="1.1.0"; sha256="00qlki2vps505nxzmfykf1iyq4b0y20nb75hbfcj63ap46z7zk3c"; depends=[assertthat pryr rmarkdown visNetwork]; }; + rmapshaper = derive2 { name="rmapshaper"; version="0.4.1"; sha256="0kd8hppn4d3z527s3kqz0mll7qjy0pbxbif46dfqx3rci6m62a68"; depends=[geojsonio geojsonlint jsonlite readr sf sp V8]; }; + rmapzen = derive2 { name="rmapzen"; version="0.4.1"; sha256="1vql1cy38c4kv8pyl81877s587kq4l9sx9nslbgk3l41wvyyvphk"; depends=[assertthat digest dplyr geojsonio httr jsonlite maps maptools purrr rgdal sf sp tibble tidyr]; }; rmarkdown = derive2 { name="rmarkdown"; version="1.10"; sha256="0mh2f3k98w7pgz0ri34149s4kx5y0kfm27nwq64k0qwxd16hwd9r"; depends=[base64enc evaluate htmltools jsonlite knitr mime rprojroot stringr tinytex yaml]; }; rmatio = derive2 { name="rmatio"; version="0.12.0"; sha256="1cw7j44rgjgbw2xln7lh29ln53lwfadr8rx0sffkjwc7lbh1r6wa"; depends=[Matrix]; }; - rmcfs = derive2 { name="rmcfs"; version="1.2.11"; sha256="0pzkxhgn4qcynv0rqbisld7hkpmx8aarxwc165bpipw2z11krdqj"; depends=[dplyr ggplot2 igraph reshape2 rJava yaml]; }; + rmcfs = derive2 { name="rmcfs"; version="1.2.15"; sha256="0qz8b6z1rslsay0m94y013wychajq850bffv6kg2m0jlf4m16320"; depends=[dplyr ggplot2 igraph reshape2 rJava yaml]; }; rmcorr = derive2 { name="rmcorr"; version="0.3.0"; sha256="1p05ln653yrd02wmn8wfzawiw6a924d8an0568fcbgl1pdna43b1"; depends=[psych RColorBrewer]; }; rmdHelpers = derive2 { name="rmdHelpers"; version="1.2"; sha256="1ahzbs8z7wvh1dwbq1kq8wrjrknxi2gck63k70gj0swjvgk0ih5r"; depends=[dplyr knitr]; }; - rmda = derive2 { name="rmda"; version="1.5"; sha256="13119x23xi912s7wl2p2a24msbczgv75x37p2jsr5w0n4l2k01wi"; depends=[caret MASS pander reshape]; }; + rmda = derive2 { name="rmda"; version="1.6"; sha256="1m7j79jwii9la47w34ka3yl1n7nql8pfn32if0aycn4yw5sy8dmc"; depends=[caret MASS pander reshape]; }; rmdformats = derive2 { name="rmdformats"; version="0.3.3"; sha256="06nyrdhy26mvgfb1bnlbd8hslybpc01a30a40wwlc3ay7yp0nzrj"; depends=[bookdown htmltools knitr questionr rmarkdown]; }; rmdshower = derive2 { name="rmdshower"; version="2.1.1"; sha256="1sjpi5ils31adii51gaa8ly7x93l9ganp6in8rsln6si4jc2ppg9"; depends=[rmarkdown]; }; rmeta = derive2 { name="rmeta"; version="3.0"; sha256="0vkbnxp579v8zmcv1isdbzj5swpr6fq17zwparxcvzswjc2x9ydr"; depends=[]; }; + rmetalog = derive2 { name="rmetalog"; version="1.0.0"; sha256="1ndw8drzhf74sjx31zfhhx9q1l6pdn4yx2i8l7klp38d5bsc27xm"; depends=[ggplot2 lpSolve]; }; rmetasim = derive2 { name="rmetasim"; version="3.1.7"; sha256="0sz4mdprdi6sgkfwfdvh2hr9nxiwq17sw0vggq3cvs7lzb0i6m9r"; depends=[ade4 adegenet gtools pegas]; }; - rmgarch = derive2 { name="rmgarch"; version="1.3-0"; sha256="0brqjhplvzl0bgsi6x057rb2cg5x372i746dhddr013p1mx0rlcx"; depends=[Bessel ff MASS Matrix pcaPP Rcpp RcppArmadillo Rsolnp rugarch shape spd xts zoo]; }; + rmgarch = derive2 { name="rmgarch"; version="1.3-5"; sha256="1c9rbd56ssa8msw8s181bn3sjyxchai8q63vchdw5g8kqi5v4l0z"; depends=[Bessel corpcor ff MASS Matrix pcaPP Rcpp RcppArmadillo Rsolnp rugarch shape spd xts zoo]; }; + rmi = derive2 { name="rmi"; version="0.1.1"; sha256="1y0395l9lhskdrk3x9ps2dmv0sznsba0n6a9fmma33dc9dhywgf9"; depends=[BH Rcpp RcppArmadillo]; }; rminer = derive2 { name="rminer"; version="1.4.2"; sha256="1hjgcawjrwsf0nv2hlznr1cvpm445yyxc6cq28k2yzyivk74si34"; depends=[adabag Cubist e1071 glmnet kernlab kknn lattice MASS mda nnet party plotrix pls randomForest rpart xgboost]; }; rmonad = derive2 { name="rmonad"; version="0.5.0"; sha256="0m7hhmn87rfh49hxrjlcxcq6q36niyxlh3w2frld68jkbks71jn5"; depends=[digest glue igraph magrittr pryr]; }; - rmpw = derive2 { name="rmpw"; version="0.0.3"; sha256="1iidiq0pz88wgh155hfy8mw0cwwwcl77zshcjrbw11zpx6p8qy94"; depends=[gtools MASS]; }; + rmpw = derive2 { name="rmpw"; version="0.0.4"; sha256="1a49rvdwvmccv4gfir48fw0b9jyrpc2q9zfyk5j9b7nxsx6x7abl"; depends=[gtools MASS]; }; rms = derive2 { name="rms"; version="5.1-2"; sha256="01wjxlqfz6l1bdsvxqq0lsbps0k86hx3ayb6fl2n2hxccvsfxkzi"; depends=[ggplot2 Hmisc htmlTable htmltools lattice multcomp nlme polspline quantreg rpart SparseM survival]; }; rms_gof = derive2 { name="rms.gof"; version="1.0"; sha256="1n0h3nrp11f2x70mfjxpk2f3g4vwjaf4476pjjwy49smxxlxwz82"; depends=[]; }; rmsfact = derive2 { name="rmsfact"; version="0.0.3"; sha256="05s23rfs9prr2ia3h4h9y614xhv91lbgppgf3mrrssxkwz220kd5"; depends=[]; }; rmsfuns = derive2 { name="rmsfuns"; version="0.0.0.2"; sha256="0by2d6l25lf5vidxbkcxghpxycffyldzzbxcw6h4rm86zmkkv1m0"; depends=[magrittr purrr readr tidyverse xts zoo]; }; rmumps = derive2 { name="rmumps"; version="5.1.2-4"; sha256="1qdpvyxwb18dapa8xqj8kjjmrnrqixkn29qn6q4cnwdwi1zcbdx6"; depends=[Rcpp]; }; rmutil = derive2 { name="rmutil"; version="1.1.1"; sha256="0yyzypkz6jjqvhafg6ipml8hrhr0w9l6j2vnmf0gdy90xj78mgag"; depends=[]; }; - rmweather = derive2 { name="rmweather"; version="0.1.1"; sha256="0p9fdvkdyicbyngsg53vf56fbc3q7yxs2m7iisd1hpaz09gazqlm"; depends=[dplyr ggplot2 lubridate magrittr pdp purrr ranger stringr strucchange testthat tibble viridis]; }; + rmweather = derive2 { name="rmweather"; version="0.1.2"; sha256="1w78qp4irgl2v3hcfmdk3c4yzbaf12lb2whf8nxpj1lcajkpcvq4"; depends=[dplyr ggplot2 lubridate magrittr pdp purrr ranger stringr strucchange tibble viridis]; }; + rmytarget = derive2 { name="rmytarget"; version="1.1"; sha256="1gjmp0mk91f15sswmi8fhkdr7j3zrl49k02m0jmhhp51g4wazxim"; depends=[dplyr httr jsonlite lubridate stringr]; }; rnaseqWrapper = derive2 { name="rnaseqWrapper"; version="1.0-1"; sha256="1fa3hmwrpccf09dlpginl31lcxpj5ypxspa0mlraynlfl5jrivch"; depends=[ecodist gplots gtools]; }; rnaturalearth = derive2 { name="rnaturalearth"; version="0.1.0"; sha256="193b31a7n9jhc607mhwxbpx5gr0fpj3qasm9dbi6kcc7vac3ilgm"; depends=[sf sp]; }; rnaturalearthdata = derive2 { name="rnaturalearthdata"; version="0.1.0"; sha256="1z32j5lz2lb8xgpkr73majw22k0b49iazj6jjc7j4w9k4zxxa102"; depends=[sp]; }; - rncl = derive2 { name="rncl"; version="0.8.2"; sha256="17inkk6ajdn1x6g253k2yjyivcryjwn903cd369h1bxlr80amqc0"; depends=[progress Rcpp]; }; + rncl = derive2 { name="rncl"; version="0.8.3"; sha256="03c8sizm32rdilbvf67gsw81w7i623pajn9blrrkq8rq8j3zdbns"; depends=[progress Rcpp]; }; rneos = derive2 { name="rneos"; version="0.3-2"; sha256="0m5mmhwnrk9ifv91s5ngmlvqqd7bw1n7glzkgk5i72cw0siiwmh0"; depends=[RCurl XML]; }; rnetcarto = derive2 { name="rnetcarto"; version="0.2.4"; sha256="0fk5rym6zp049bl1f7bkl2231mjh3pgnxn0nhvmzpsah08rh4rr6"; depends=[]; }; rngSetSeed = derive2 { name="rngSetSeed"; version="0.3-2"; sha256="00mqjjkhbnvxqkf1kz16gipsf98q62vmhx9v8140qs7c4ljbhc3a"; depends=[]; }; @@ -10666,17 +11134,18 @@ in with self; { rnpn = derive2 { name="rnpn"; version="0.1.0"; sha256="10xx8fxgdknv71ks42xxvf38xsmjy6s87y67wi21673v0n07fxb5"; depends=[data_table httr jsonlite plyr]; }; rnr = derive2 { name="rnr"; version="0.2.1"; sha256="1z9bab3qmq8d79bcvjzldbxlah2w8mqp2ifd0cn1348dafwa0dhi"; depends=[assertthat purrr]; }; rnrfa = derive2 { name="rnrfa"; version="1.4.0"; sha256="007j6a2hihw7h0vhv6aiz7iymzr3lkzmc1dy5f8b22z5n52k4pl3"; depends=[ggmap ggplot2 httr plyr rgdal rjson sp stringr xml2 xts]; }; - roadoi = derive2 { name="roadoi"; version="0.5.1"; sha256="139i0nhvmkx66f1k3vg5b59m0b12zd6abq38ggx15vshzs5q1f5w"; depends=[dplyr httr jsonlite miniUI plyr purrr shiny tibble tidyr]; }; - roahd = derive2 { name="roahd"; version="1.4"; sha256="1snbda40lxb0hyk87alljxclwv3lsjy8qm39ynq8299f1ra1l1lh"; depends=[dplyr magrittr robustbase scales]; }; + roadoi = derive2 { name="roadoi"; version="0.5.2"; sha256="0fzvg75m5yyz2181n2i208525cixyiwclfij47qd3d61qqzlmlp3"; depends=[dplyr httr jsonlite miniUI plyr purrr shiny tibble tidyr]; }; + roahd = derive2 { name="roahd"; version="1.4.1"; sha256="0d89d21s32bsjkm8bdiqrbccd3m9badh87vrsb1laawhl4hr3dn9"; depends=[dplyr magrittr robustbase scales]; }; robCompositions = derive2 { name="robCompositions"; version="2.0.8"; sha256="0i7pjp0ir0n7j5r75ha5avsrqniji1zg7jb93nj9ji3qy286yyxw"; depends=[car cluster cvTools data_table e1071 fpc GGally ggplot2 kernlab MASS mclust pls Rcpp robustbase rrcov sROC VIM zCompositions]; }; robcbi = derive2 { name="robcbi"; version="1.1-2"; sha256="1n8whpnpsm9imiz8l1jxq5x597ydzb2b54jkvrl05hmwh79p97in"; depends=[robeth]; }; robcor = derive2 { name="robcor"; version="0.1-6"; sha256="1hw8simv93jq8a5y79hblhqz157wr8q9dzgm0xhvvv5nkzyqkpzf"; depends=[]; }; - robeth = derive2 { name="robeth"; version="2.7-2"; sha256="049j24hxg7jy80xz615lj7l2mqiybm9zkmwznqpbzrz10s38dj3y"; depends=[]; }; + robeth = derive2 { name="robeth"; version="2.7-4"; sha256="11ghpy88r02844mw99zxl7qzkic8kcl0gw56a4kdyw84r0lyv8rg"; depends=[]; }; robets = derive2 { name="robets"; version="1.4"; sha256="0lvzfpv6569pjysblhadd05sglx0qvyr9wipb9cpiya4a1992n61"; depends=[forecast Rcpp]; }; robfilter = derive2 { name="robfilter"; version="4.1.1"; sha256="1fxqva2khk16sj5ka5zdpaknh2w9n925ys0i4v7ahqvzhnxg6l3b"; depends=[lattice MASS robustbase]; }; robis = derive2 { name="robis"; version="1.0.1"; sha256="11j86nyslh52fxvl6m2vay638n5gqw4akd9d1mkqnpvrvxhm41l5"; depends=[dplyr httr jsonlite leaflet]; }; - robmed = derive2 { name="robmed"; version="0.1.1"; sha256="1716vzci0lmim4n28bc2pjky1shjxqrclgllj3hc4dzf8j22dxbz"; depends=[boot ggplot2]; }; - robotstxt = derive2 { name="robotstxt"; version="0.6.0"; sha256="1xia7xivqnqj0xis6i4qzm3v414ga1m7lmv1piz1b431faq9s1ai"; depends=[future httr magrittr spiderbar stringr]; }; + robmed = derive2 { name="robmed"; version="0.2.0"; sha256="1xrdlmyawzzglv9s41nm470yc6dn21cqqalsnk77vk72dhib7p3k"; depends=[boot ggplot2 robustbase shiny]; }; + robmixglm = derive2 { name="robmixglm"; version="1.0-2"; sha256="0z23frjv9yscw0q33s5vlrmisg9an5hksyhcrgcnlan6x63r91kq"; depends=[actuar bbmle boot fastGHQuad MASS numDeriv Rcpp VGAM]; }; + robotstxt = derive2 { name="robotstxt"; version="0.6.2"; sha256="1c1rhiwkdzvbspwa5km6gp3sjhzmb60ljibb2pf26s931lkr5b6l"; depends=[future future_apply httr magrittr spiderbar stringr]; }; robreg3S = derive2 { name="robreg3S"; version="0.3"; sha256="0rv8qh98wws1f40d1kmysyy9qin0ngsvwq63cnxbwi290wsnrvls"; depends=[GSE MASS robustbase]; }; robumeta = derive2 { name="robumeta"; version="2.0"; sha256="1ynlfxlzh442jd1cf02j0f948m16d536a30gb4bf7208baqri1vg"; depends=[]; }; robust = derive2 { name="robust"; version="0.4-18"; sha256="1b7qh1aff500nd6dh4y2ipmjgdiq8991shflb63pc39vpc0ny6g4"; depends=[fit_models lattice MASS robustbase rrcov]; }; @@ -10686,12 +11155,12 @@ in with self; { robustHD = derive2 { name="robustHD"; version="0.5.1"; sha256="14v6l0appy206zx1jcv7m14r2z9g12dpkm6zxzv756rca2yj8fp5"; depends=[ggplot2 MASS perry Rcpp RcppArmadillo robustbase]; }; robustX = derive2 { name="robustX"; version="1.2-2"; sha256="0pgfq78qd8s40ciqval01bwajy6zfdjms1lbh0b5g0rww6920s6f"; depends=[robustbase]; }; robustarima = derive2 { name="robustarima"; version="0.2.5"; sha256="0mqlp4xmma74rgwb6rihbzs5nillcnddl6smlxmm8lq1wba27jdj"; depends=[splusTimeDate splusTimeSeries]; }; - robustbase = derive2 { name="robustbase"; version="0.93-1"; sha256="10fsc50vqngi2a26fgi99bacq4rb05jg8kqw38r4n4khssw06rk4"; depends=[DEoptimR]; }; + robustbase = derive2 { name="robustbase"; version="0.93-3"; sha256="1nqh1qg1qd1qrxl1w585dqx7ql55qzjny1r4f9hqxpwd7lml07cc"; depends=[DEoptimR]; }; robustfa = derive2 { name="robustfa"; version="1.0-5"; sha256="04nk5ipml54snsmiqf5sbhx490i46gnhs7yibf4wscrsj1bh2mqy"; depends=[rrcov]; }; robustgam = derive2 { name="robustgam"; version="0.1.7"; sha256="0s1z7jylj757g91najbyi1aiqnssd207jfm9yhias746540qp3kw"; depends=[mgcv Rcpp RcppArmadillo robustbase]; }; robustlmm = derive2 { name="robustlmm"; version="2.2-1"; sha256="0xh77jrhjybrbcfzvfzywj8nanqyfgn93rhd1bixw4snz7l1n97x"; depends=[cubature fastGHQuad ggplot2 lattice lme4 Matrix nlme Rcpp RcppEigen robustbase xtable]; }; robustloggamma = derive2 { name="robustloggamma"; version="1.0-2"; sha256="1cifyasrik010zs8jsz0kzzmwm3qmc0y7h2dahg2ibpwxfcqfcpq"; depends=[numDeriv RobustAFT robustbase survival]; }; - robustrank = derive2 { name="robustrank"; version="2017.12-2"; sha256="0lcjn77lsdfbcby89hfcz2h049v2fndw7rankdcdgnl6lw2bdpvr"; depends=[kyotil]; }; + robustrank = derive2 { name="robustrank"; version="2018.10-1"; sha256="0fggn4kv56rvjb84lf18q140flcc6n90bqj59g5zpf8q9l7pqy9z"; depends=[kyotil]; }; robustrao = derive2 { name="robustrao"; version="1.0-3"; sha256="0gcxxizsg380blrv55vl9f3az8gnr274c6idi0pimhh5c26h7ma6"; depends=[doParallel foreach gmp igraph iterpc quadprog]; }; robustreg = derive2 { name="robustreg"; version="0.1-10"; sha256="1zwfgmla6wna48vq5hbz7c7fvmb29y949790w2j6x8pkjzr781sz"; depends=[Matrix Rcpp RcppArmadillo]; }; robustsae = derive2 { name="robustsae"; version="0.1.0"; sha256="0fi1fpqnfj6vkmidlr90kqbn1bxxxqb5qpqqrz9rrimlsvrc4ddl"; depends=[coda lattice MCMCpack mvtnorm pscl]; }; @@ -10699,16 +11168,19 @@ in with self; { rocNIT = derive2 { name="rocNIT"; version="1.0"; sha256="18vxyh1wcq6dv62xf2dyl4226cd00n4hlbaqnynl9j5gnrmmsvi1"; depends=[]; }; rocc = derive2 { name="rocc"; version="1.2"; sha256="00yxbbphhwkg4sj2h7pd9vw86yavl711nk8yylwmjd3qv39qjml0"; depends=[ROCR]; }; roccv = derive2 { name="roccv"; version="1.1"; sha256="13pwrc31w279l7j58wdz24p8j9jdh53rsavj1mymj92jpm52nfzl"; depends=[glmnet pROC]; }; - rockchalk = derive2 { name="rockchalk"; version="1.8.111"; sha256="0x82mmsvy41cw1chbrxwjj35fwimb3iv9lrlhxsslgix62xlskvx"; depends=[car lme4 MASS]; }; - rococo = derive2 { name="rococo"; version="1.1.5"; sha256="062pj62haf0xw74p6c1dd20ipcxka8nn0mxsq490d22kqwm4vf5a"; depends=[Rcpp]; }; + rockchalk = derive2 { name="rockchalk"; version="1.8.117"; sha256="0xy665iypp6c3whzk5qj3n3f69mm23z08cxdgxnvyrnwp5zznqg8"; depends=[carData lme4 MASS]; }; + rococo = derive2 { name="rococo"; version="1.1.7"; sha256="1fp3kk5j9kc0vyr50rlbsxjc9p3qz5137sifxsbd297p7zj1fcs2"; depends=[Rcpp]; }; + rocsvm_path = derive2 { name="rocsvm.path"; version="0.1.0"; sha256="1pd59bzcz96sxpp725pqa7pjh2gdrfapbilp4wccjkf5290zw56v"; depends=[quadprog svmpath]; }; rodd = derive2 { name="rodd"; version="0.2-1"; sha256="01zrkw4lr21vxk2grfc37iyrcipfdcj5m0i7gnxsvs435y9fqagd"; depends=[Matrix matrixcalc numDeriv quadprog rootSolve]; }; rodeo = derive2 { name="rodeo"; version="0.7.4"; sha256="16yzj12m9wvcrqxc33rpbyzbq019swi5jxnbda9crfwjdvafaa0d"; depends=[deSolve R6]; }; rodham = derive2 { name="rodham"; version="0.1.1"; sha256="15mrlx7azvwkwjgfplvs5fhk2nwlg9pay2l99q327p8hx87jr8ra"; depends=[jsonlite plyr splitstackshape stringr tibble]; }; - roll = derive2 { name="roll"; version="1.0.7"; sha256="059n1pl7692grzv4pmnj8s6cs2zi98lr1s5zi9pxg5vpw7r6h2v9"; depends=[Rcpp RcppArmadillo RcppParallel]; }; - rollRegres = derive2 { name="rollRegres"; version="0.1.0"; sha256="09vb06j8yyxw7k7dmni8s90wnvdk5l5x09gr76cvp4rjkx8jjlpj"; depends=[checkmate Rcpp RcppArmadillo]; }; + roll = derive2 { name="roll"; version="1.1.1"; sha256="146x0sfalwxykrj0m08kmrjhihdfnss97hk6x76zd46ji305zk9v"; depends=[Rcpp RcppArmadillo RcppParallel]; }; + rollRegres = derive2 { name="rollRegres"; version="0.1.1"; sha256="1mbwx1rpb5sj6kzsagf3mg7kz11naqqn5fpvnpdvmv7mcp92wj7x"; depends=[checkmate Rcpp RcppArmadillo]; }; rollbar = derive2 { name="rollbar"; version="0.1.0"; sha256="1q2ym0vkgbdnibxmwx0bp9c20g3bm8fzwwgs3j4bxg1ydg3gnkj4"; depends=[httr]; }; rollmatch = derive2 { name="rollmatch"; version="1.0.1"; sha256="1bxd31s30jji97m93z4w4hdxdrfyp947dyzhjwmm13zc59mpfnvs"; depends=[dplyr magrittr]; }; rollply = derive2 { name="rollply"; version="0.5.0"; sha256="01rh4x9352ixdhrqdysapqx5ynksknyf8n230b340pxwaz2d7xhc"; depends=[plyr Rcpp stringr]; }; + roloc = derive2 { name="roloc"; version="0.1-1"; sha256="0xynj12gp010c23f6ll9p343vwgxwa22s771p1w2pi65cj2ixhas"; depends=[colorspace]; }; + rolocISCCNBS = derive2 { name="rolocISCCNBS"; version="0.1"; sha256="100jh5m2c1zp5wg3wd4y2i47dzx1j0g6lfwyqmwk4bz99yzzz5am"; depends=[colorspace roloc]; }; rolr = derive2 { name="rolr"; version="1.0.0"; sha256="04nm4q0mlr4w6jb0frykzlyknfn3gn02ysqr5ll5jch6wawichy2"; depends=[survival]; }; rolypoly = derive2 { name="rolypoly"; version="0.1.0"; sha256="11nf7in6n03675l11ynl4rp20rlzy7jli3m518s4sqqxdm8f8ci7"; depends=[data_table dplyr foreach ggplot2 glmnet MASS Matrix matrixcalc]; }; rootSolve = derive2 { name="rootSolve"; version="1.7"; sha256="08ic6ggcc5dw4nv9xsqkm3vnvswmxyhnqnv1rdjv1h2gy1ivpcq8"; depends=[]; }; @@ -10717,8 +11189,10 @@ in with self; { rope = derive2 { name="rope"; version="1.0"; sha256="06qp6h8cjnz0yacm4r39k99hrw74iyq16h5mqfcki7sf3zqbfm7r"; depends=[]; }; ropenaq = derive2 { name="ropenaq"; version="0.2.6"; sha256="065p4c8l4bqxy00clbjhad8hqw4gg2h2c00b06n2fa5n70z0akgq"; depends=[crul dplyr jsonlite lazyeval lubridate tidyr]; }; ropensecretsapi = derive2 { name="ropensecretsapi"; version="1.0.1"; sha256="0d4yl0h4am3blskdnzk119hk374c3vx0cg99r20w07yh8jfafrw7"; depends=[RCurl RJSONIO]; }; + roperators = derive2 { name="roperators"; version="1.1.0"; sha256="0klmk1jmh1iysgf345qa6qyjmn1pkz072ha254k90flprgicg7c6"; depends=[]; }; ropercenter = derive2 { name="ropercenter"; version="0.2.0"; sha256="1ghn666jhwmkxwrr8pc398nhzvg4y4097pa19m4b08d9mkg9iqlj"; depends=[dplyr foreign haven httr readr rvest stringr tibble tidyr xml2]; }; - roprov = derive2 { name="roprov"; version="0.1.0"; sha256="0g9jg9j91v705kygs4yx1y6s0cx5krr6kbg3jlgcsda9ldjmj7fy"; depends=[CodeDepends fastdigest igraph]; }; + roprov = derive2 { name="roprov"; version="0.1.1"; sha256="1b03y61h5j5cirk43hf1z520g47iq9jnkh150qshpk52pd4iq1n0"; depends=[CodeDepends fastdigest igraph]; }; + roptim = derive2 { name="roptim"; version="0.1.1"; sha256="0r06msb8d3i01inzkyc02zy4zg63sww6jb5cdhzzi5iz768lczc1"; depends=[Rcpp RcppArmadillo]; }; rorcid = derive2 { name="rorcid"; version="0.4.0"; sha256="1diz14b5jzs9i4khyykq58cbgz87qraivv9lhq5nrrrfi2gryl9r"; depends=[crul data_table fauxpas httr jsonlite tibble xml2]; }; rorutadis = derive2 { name="rorutadis"; version="0.4.2"; sha256="13a7xj4qw1nd8xgrqhrki3php960lgy9gy38sg4kpvs4j2rwijzc"; depends=[ggplot2 gridExtra hitandrun Rglpk]; }; rosetteApi = derive2 { name="rosetteApi"; version="1.9.0"; sha256="0pnrfc0dcbh5r3qwfwyb0q063bzwpw4ga60965y5qyxz64cyx74r"; depends=[httr jsonlite]; }; @@ -10727,22 +11201,23 @@ in with self; { rosqp = derive2 { name="rosqp"; version="0.1.0"; sha256="0975g7p75bq238g7lr200svsqm9i11z7l331r0igm5ycahljrlsm"; depends=[Matrix R6 Rcpp]; }; rotationForest = derive2 { name="rotationForest"; version="0.1.3"; sha256="1z2wk3mcs5hrahsxralidbc0dd8gxdbwjpr2f71g4g3isfx1ic8d"; depends=[rpart]; }; rotations = derive2 { name="rotations"; version="1.5"; sha256="1zksh6hyxdkm0lvvrld6dgkmhszn6wsjrjzr2xbn3af3gsvsydaa"; depends=[ggplot2 Rcpp RcppArmadillo rgl sphereplot]; }; - rotl = derive2 { name="rotl"; version="3.0.4"; sha256="1zc4418gxpd65n60lspsdm15v7apkv6wkf9jqqs152z079ppdrhx"; depends=[ape assertthat httr jsonlite rentrez rncl]; }; + rotl = derive2 { name="rotl"; version="3.0.5"; sha256="18iq91r7g79nv6qmkb6kp5vlc3jkymfsdzs83il5rd63cvj6gp46"; depends=[ape assertthat httr jsonlite rentrez rncl]; }; roughrf = derive2 { name="roughrf"; version="1.0"; sha256="0nwdynqfb9yzjvi1lykgdkch3b4g09aj8vbd6sf5pyx473s066y4"; depends=[mice nnet randomForest]; }; + roundhouse = derive2 { name="roundhouse"; version="0.0.1"; sha256="142dw9ky6fyp5n8zf5lymx083gi56q6wxj4jm0m8cjb0khiqw2lq"; depends=[httr jsonlite]; }; routr = derive2 { name="routr"; version="0.3.0"; sha256="1mjf1vwrh1k1kjl1kcgqs29zb8h9m05630czsjkz7li3pmvy9mrv"; depends=[assertthat digest httpuv R6 reqres stringi uuid]; }; rowr = derive2 { name="rowr"; version="1.1.3"; sha256="1f93c2yni956flwnxgphn340pc7p6yagr5xnmhinjgk9kvsd07yh"; depends=[]; }; - roxygen2 = derive2 { name="roxygen2"; version="6.0.1"; sha256="0xpzziminf225kjwhyl51kgkzhplyzhk5farhf5s822krl2xqbfj"; depends=[brew commonmark desc digest R6 Rcpp stringi stringr xml2]; }; + roxygen2 = derive2 { name="roxygen2"; version="6.1.0"; sha256="0ji9k4s1bvfbl8wimfqj1lqr33h1claaz30vb5pgksxyg77j5xaa"; depends=[brew commonmark desc digest pkgload purrr R6 Rcpp stringi stringr xml2]; }; royston = derive2 { name="royston"; version="1.2"; sha256="1rywc89qzx0hldbq10201bjdhz60pq2gmgd9b9j52mza3w4canjz"; depends=[moments nortest]; }; rpanel = derive2 { name="rpanel"; version="1.1-4"; sha256="0yzasb4k5jcx3wfsll9k9alyrwc0l1x6pk91nj7cqrdiapw8j519"; depends=[]; }; rpart = derive2 { name="rpart"; version="4.1-13"; sha256="0k29qx3k3pj5sgrpg0p47yd8i811rmdakaw57bigpq1449asc4cf"; depends=[]; }; - rpart_plot = derive2 { name="rpart.plot"; version="2.2.0"; sha256="1sh45ixd22nl7lxry82h74k4d5y2yvrs9g2ydqqv5jwkk7hmki11"; depends=[rpart]; }; + rpart_plot = derive2 { name="rpart.plot"; version="3.0.4"; sha256="0b4y1adn0gnx9igi0nghjp2bf5pa2d5fqz00ra505ljdwj8d0lgx"; depends=[rpart]; }; rpart_utils = derive2 { name="rpart.utils"; version="0.5"; sha256="00ahvmly6cdf7qhhcic0dbjlljqq8kbhx15rc7vrkd3hzd55c0im"; depends=[rpart]; }; rpartScore = derive2 { name="rpartScore"; version="1.0-1"; sha256="15zamlzbf6avir8zfw88531zg5c0a6sc5r9v5cy9h08ypf34xf4y"; depends=[rpart]; }; rpartitions = derive2 { name="rpartitions"; version="0.1"; sha256="1gklsi4pqhk16xp9s49n1lr9ldm1vx61pvphjqsqkzrlxwcpx3j8"; depends=[hash]; }; rpatrec = derive2 { name="rpatrec"; version="1.0.1"; sha256="0zj461frf6n5s97zq7r52q0blsn2xq2759impgz6v4pr87gmq0si"; depends=[np]; }; rpca = derive2 { name="rpca"; version="0.2.3"; sha256="135q3g8jmn9rwamrc9ss45cnbfyw8kxcbrf0kinw8asz70fihj9z"; depends=[]; }; rpcdsearch = derive2 { name="rpcdsearch"; version="1.0"; sha256="17g3x15qgv2hamlj451sb88i83n8svw5vnmjpijp5cnn5d1jx0d6"; depends=[assertthat combinat dplyr stringr xlsx]; }; - rpdo = derive2 { name="rpdo"; version="0.2.3"; sha256="150kd9pvfr7msrh55vsqcj8lv994izlvhxf4g5n1qbzdcaqsdjzp"; depends=[checkr]; }; + rpdo = derive2 { name="rpdo"; version="0.2.4"; sha256="153xj2fw6ddqxcdriq825nigf6zdakgx5ik2yr4w4bayam1qa5fq"; depends=[checkr]; }; rpf = derive2 { name="rpf"; version="0.59"; sha256="06gibjngl27mmvmni6ncz5qa4nlbxlna57f13607a9r739146378"; depends=[mvtnorm RcppEigen]; }; rpg = derive2 { name="rpg"; version="1.6"; sha256="1vn5cswrkmw98z1dr0f0yjkz3n8kwvjb4zknqg81fzqsagfc89yx"; depends=[getPass RApiSerialize Rcpp uuid]; }; rpgm = derive2 { name="rpgm"; version="1.1.2"; sha256="0pbja877gb3mn7m78lfdl217dm7qsrblq6gwrjh5wbv1nd532hvz"; depends=[]; }; @@ -10750,13 +11225,13 @@ in with self; { rpicosat = derive2 { name="rpicosat"; version="1.0.1"; sha256="1zj2d6jairmvya91vhv9kpkf34zmzl9vlha5yvfjj0j0apmqc0li"; depends=[]; }; rpinterest = derive2 { name="rpinterest"; version="0.3.1"; sha256="0kkf73byhgzqxw85wda3nh7qsq81pc035vi6z3fhnvb9ssszwakc"; depends=[httr magrittr rjson]; }; rpivotTable = derive2 { name="rpivotTable"; version="0.3.0"; sha256="0ndhsw4nnz6wf0v8dh4sz8867m01jjkzw6aq7f490z1ypa3d9fv5"; depends=[htmlwidgets]; }; - rplos = derive2 { name="rplos"; version="0.8.0"; sha256="0l38zllzklsy6q2l2r0v2x8wcsldnxjhilcsq5ykl1k35gbva19y"; depends=[crul dplyr ggplot2 jsonlite lubridate plyr reshape2 solrium whisker]; }; - rplotengine = derive2 { name="rplotengine"; version="1.0-6"; sha256="1x9lf5h6cmjyi5xyvmk2ii2dwkwmjqbg0m1fhfabay0flqc7qdm0"; depends=[xtable]; }; + rplos = derive2 { name="rplos"; version="0.8.4"; sha256="1hx1r9ag62a2mv8zqag0i1f10k5rfdygjhqinql4cgzgrdi7y3h7"; depends=[crul dplyr ggplot2 jsonlite lubridate plyr reshape2 solrium whisker]; }; + rplotengine = derive2 { name="rplotengine"; version="1.0-7"; sha256="1bbciq84l0h6g4qajlcqg3v66g2rspflv6k7x5h5qzwlcb4p4dps"; depends=[xtable]; }; rpms = derive2 { name="rpms"; version="0.3.0"; sha256="0kdxjn2aij83ax0g1ipdb7qrvpqn67vhs3z54ihj1kbx4i8pzs9g"; depends=[Rcpp RcppArmadillo]; }; rpn = derive2 { name="rpn"; version="1.0"; sha256="0wk8y4yk6wqzbq5bqv6zncfp9az5vn8xgwh426pk3bxm3v4xi16i"; depends=[BBmisc checkmate]; }; rpnf = derive2 { name="rpnf"; version="1.0.5"; sha256="07byg0ym4d2cr6fp74z379jhsaw4c0xrwf622dvhwa4frn4anl60"; depends=[]; }; rportfolios = derive2 { name="rportfolios"; version="1.0-1"; sha256="00xxh85jpl0rw8fv84i7zmq0psc92pq7hharnr4szbmhgz8kbc35"; depends=[truncdist]; }; - rpostgis = derive2 { name="rpostgis"; version="1.4.0"; sha256="0rgi7ax2n2fln12501zshwaz23nns9qk4vy1ylnaqb4bg0x30gn4"; depends=[DBI raster rgeos RPostgreSQL sp]; }; + rpostgis = derive2 { name="rpostgis"; version="1.4.1"; sha256="15s5k5grg2va5dkszpbrk0kgbmrq5xhg7jm37q90m3ydbgln2ys2"; depends=[DBI raster rgeos RPostgreSQL sp]; }; rpostgisLT = derive2 { name="rpostgisLT"; version="0.6.0"; sha256="1adwpkfndm6n3s9xcx8zrwnj6bmgvq4nzs072fnl5i6kjy6ngjm6"; depends=[adehabitatLT DBI htmltools leaflet lubridate magrittr mapview rpostgis RPostgreSQL sf shiny shinyWidgets sp]; }; rppo = derive2 { name="rppo"; version="1.0"; sha256="0agqys52l8bb3mc3bpawym12phl5r1ymalfvgrq5w6n78lpzcxls"; depends=[httr jsonlite plyr readr]; }; rpql = derive2 { name="rpql"; version="0.6"; sha256="0kbxhh0pacgh5d490665a5k00qh93rv5k7v3g73vrgn6lc085a54"; depends=[gamlss_dist lme4 MASS Matrix mvtnorm Rcpp RcppArmadillo]; }; @@ -10764,14 +11239,14 @@ in with self; { rprime = derive2 { name="rprime"; version="0.1.0"; sha256="1v6n1qi0i7x8xgizbyvp1mnwc316lsan4rvam44fgjj45fcd79gd"; depends=[assertthat plyr stringi stringr]; }; rprintf = derive2 { name="rprintf"; version="0.2.1"; sha256="0rwqpln0igxb4m6d6jyp7h3shfb8sbp0kj7cgkffjp88hn9qm4h3"; depends=[stringi]; }; rprojroot = derive2 { name="rprojroot"; version="1.3-2"; sha256="12r3fdxmi2pmwn6ic3rhg0b20ll5z420m0d8fziv1n21961namnz"; depends=[backports]; }; - rpsftm = derive2 { name="rpsftm"; version="1.2.2"; sha256="0xfw2rc8k9nnwzmzf803w5aarhm09hvi8ry5gi21d9n8fxsj1q97"; depends=[ggplot2 rootSolve survival]; }; + rpsftm = derive2 { name="rpsftm"; version="1.2.3"; sha256="1l0674jsi5ngazmbl13wm73xwxyqy4z6k7p0j46j6wcv84ljj7ss"; depends=[ggplot2 rootSolve survival]; }; rpst = derive2 { name="rpst"; version="1.0.0"; sha256="10cbgj67lqgh5bawwa0nwj9kfl3jg4vdm121kc61q199v8dw7nrz"; depends=[plotrix survival]; }; rpsychi = derive2 { name="rpsychi"; version="0.8"; sha256="1h40kbqvvwwjkz5hrclj6j22zhav3yyfbbhqahs1whwjkksnam4w"; depends=[gtools]; }; rptR = derive2 { name="rptR"; version="0.9.21"; sha256="0wqh9d372s2222qm5w0wx77l2sj7zvdnl7zvxcn5wfs3cz84fj15"; depends=[lme4 pbapply]; }; rpubchem = derive2 { name="rpubchem"; version="1.5.10"; sha256="06j9ir65ykky5hdbyv74fnddwqd39jxvr6jig0kjqisc75k4spjz"; depends=[base64enc car data_table fingerprint iterators itertools RCurl RJSONIO stringr XML]; }; rqPen = derive2 { name="rqPen"; version="2.0"; sha256="13m21v753njaramgpbhn0lb793b6946crv5v8vl127w38q0z3wyd"; depends=[quantreg regpro]; }; - rqdatatable = derive2 { name="rqdatatable"; version="0.1.1"; sha256="14m0sfl46kkzwv4pmgl8wc4sxb9b14lbx3m3c7r6d3iv6jjmaaj2"; depends=[data_table rquery wrapr]; }; - rquery = derive2 { name="rquery"; version="0.5.0"; sha256="1ssf7mxj8dy78v9a9bmaxppp2cygpcqndir40vavl6fm9v34s0nq"; depends=[wrapr]; }; + rqdatatable = derive2 { name="rqdatatable"; version="1.1.1"; sha256="1634llj4ykkn85ijj978k9rxclp7ff687vsvr9i2v5xppg7sbr5h"; depends=[data_table rquery wrapr]; }; + rquery = derive2 { name="rquery"; version="1.1.1"; sha256="0w7fs5mvw8dzaiw7xl75a2rl99nhfay5mwl12smakd1zpsn0v8n3"; depends=[wrapr]; }; rr = derive2 { name="rr"; version="1.4"; sha256="1c2h6ibjfwrjfqh1if3c90pdh0g2rf3p71j4p9w23xbbrx2l80pl"; depends=[arm coda magic MASS]; }; rrBLUP = derive2 { name="rrBLUP"; version="4.6"; sha256="1bw4pjj9hm9ik5bvvklnlkykhlqm6k7pbkma1iwc3kbg8shpbd18"; depends=[]; }; rrBlupMethod6 = derive2 { name="rrBlupMethod6"; version="1.3"; sha256="1qwv954mhry46ff2ax48xcmnasygi5alv8d413g3qbk2da6i0d8l"; depends=[]; }; @@ -10782,7 +11257,7 @@ in with self; { rrd = derive2 { name="rrd"; version="0.2.1"; sha256="1n4590h3xzja7j8fzay4b8rp98wnilg2znnkbw4ffk9fdac2wr5l"; depends=[assertthat tibble]; }; rrecsys = derive2 { name="rrecsys"; version="0.9.7.3"; sha256="034p7ncnzlkniicl5nd58m9wjy7mc00f027zpg5das226svhfywf"; depends=[ggplot2 knitr MASS Rcpp registry]; }; rredis = derive2 { name="rredis"; version="1.7.0"; sha256="0wzamwpmx20did8xj8x9dllri2ps83viyqjic18ari7i4h1bpixv"; depends=[]; }; - rredlist = derive2 { name="rredlist"; version="0.4.0"; sha256="0j2hab26zs9dyg9fggza7yffbvwvnmrk5frbfs2ys8h3hg2x6ncy"; depends=[crul jsonlite]; }; + rredlist = derive2 { name="rredlist"; version="0.5.0"; sha256="12dqilcwyxad5yjz8gh29ycwj2rbm1g0hxfsqkl7zsjaz5lbcka0"; depends=[crul jsonlite]; }; rrefine = derive2 { name="rrefine"; version="1.0"; sha256="1lh3vddrp5k9bhz5spv93w0qm9z5lskpdgxfksys0l3275hzx1lm"; depends=[httr readr rlist]; }; rreg = derive2 { name="rreg"; version="0.2.1"; sha256="05c2yj58zn43zkmqp4iyblsixsq76hsjkchffl5rkqynvgxi0qzi"; depends=[directlabels ggplot2]; }; rrepast = derive2 { name="rrepast"; version="0.7.0"; sha256="1s596sk993aam5rsb4as2y3n5wcgjlnb25b29l59z0xks1v04mnc"; depends=[digest doParallel foreach ggplot2 gridExtra lhs rJava sensitivity xlsx]; }; @@ -10792,44 +11267,45 @@ in with self; { rroad = derive2 { name="rroad"; version="0.0.5"; sha256="09q5r9wq3vm5wy5aigx9wffv7m0njlp3sma1djm6cp7hhwgss0nj"; depends=[]; }; rrpack = derive2 { name="rrpack"; version="0.1-7"; sha256="0svrw2ik59hjyfb0kag4nv8ilcaz7irmkp7ndbxxn0jg7dacb411"; depends=[ggplot2 glmnet lassoshooting MASS Rcpp RcppArmadillo]; }; rrr = derive2 { name="rrr"; version="1.0.0"; sha256="0sv6k70mv325yjm8yjy4dw8cqc0xc071iiv94fk1l1yfz0n67prz"; depends=[dplyr GGally ggplot2 magrittr MASS plotly Rcpp]; }; - rsMove = derive2 { name="rsMove"; version="0.2.4"; sha256="01iag63vskm68zjgq5qmgiimhmxcmp0mq6qarzsr3jlgmxix6kqs"; depends=[caret gdalUtils ggplot2 igraph lattice lubridate pryr randomForest raster RCurl rgdal sp spatialEco]; }; + rrtable = derive2 { name="rrtable"; version="0.1.0"; sha256="1rvqb32fr63dkm5kz291pxzli8yi10k76v0lm1qdn28cx1l6ff3y"; depends=[devEMF editData flextable ggplot2 magrittr moonBook officer purrr readr rmarkdown rvg shiny stringr ztable]; }; + rsMove = derive2 { name="rsMove"; version="0.2.6"; sha256="15mr2i0fv1k230ncfkbdk564rydsq9zy9bgwackbg9zlix8x7874"; depends=[caret gdalUtils ggplot2 igraph lattice lubridate plyr pryr randomForest raster RCurl rgdal sp spatialEco]; }; rsae = derive2 { name="rsae"; version="0.1-5"; sha256="1f3ry3jwa6vg2vq2npx2pzzvfwadz8m48hjrqjk860nfjrymwgx5"; depends=[]; }; rsample = derive2 { name="rsample"; version="0.0.2"; sha256="10lmpy4ca045j2fxbz5xzl1w9242dkp6sc8hhrk0fxs0dkfb7amf"; depends=[broom dplyr purrr recipes rlang tibble tidyr]; }; rsatscan = derive2 { name="rsatscan"; version="0.3.9200"; sha256="00vgby24jknq8nl7rnqcwg7gawcxhwq8b7m98vjx2hkqx39n4g21"; depends=[foreign]; }; - rscala = derive2 { name="rscala"; version="3.0.2"; sha256="0gbi2q63pbl8izyq8wjrjn9d0746ylak8fp7zsjzw56gjpak79q3"; depends=[]; }; + rscala = derive2 { name="rscala"; version="3.2.3"; sha256="11p626ys62xgvs0pd5hsnywnhvgm5m082s6laqg823az8ybs9wyp"; depends=[]; }; rscimark = derive2 { name="rscimark"; version="1.0"; sha256="1jsjz4d5bnxb90qqzz42m4nyvm8d8w8bs0m1r5g2n78zmckqb8vy"; depends=[checkmate]; }; rsconnect = derive2 { name="rsconnect"; version="0.8.8"; sha256="019phwamg2irb0ak9y0sn25ihi0a9sfdpa02dz9x0bhpcg55x0li"; depends=[digest packrat PKI RCurl RJSONIO rstudioapi yaml]; }; - rscopus = derive2 { name="rscopus"; version="0.5.11"; sha256="1h0lj68znfy1jc2b7qbxj0cq8y2blhwz2p82cfn321yhca0s818c"; depends=[dplyr httr plyr tidyr]; }; - rscorecard = derive2 { name="rscorecard"; version="0.7.1"; sha256="1j7v383gcb13bi6d1v59pkx6d9g4yichyyh5ads9w82qq6v31xnw"; depends=[dplyr httr jsonlite lazyeval magrittr]; }; + rscopus = derive2 { name="rscopus"; version="0.6.1"; sha256="1nhpgslwhsz6zpk82fsyqk4qrsw9avq1jv2wbz5ahbfkgd5rshwa"; depends=[dplyr httr plyr tidyr]; }; + rscorecard = derive2 { name="rscorecard"; version="0.10.0"; sha256="1sls4fnr02kwc1d9myd92am1yzj6mi1pxs694n74amyl4m58kqg9"; depends=[dplyr httr jsonlite lazyeval magrittr tidyselect]; }; rsdepth = derive2 { name="rsdepth"; version="0.1-5"; sha256="064jbb6gnx0sm41w3sbi6mvsbzsfkjqfici6frk8sfm9ybvm591j"; depends=[]; }; - rsdmx = derive2 { name="rsdmx"; version="0.5-12"; sha256="0qzbn3d6vkvn8qnjymmjbqgcffglnl5qm2zm4v6694xwcc1msvwx"; depends=[plyr RCurl XML]; }; + rsdmx = derive2 { name="rsdmx"; version="0.5-13"; sha256="1lgy5nbrl4frfn805lghyx1gl2h8lkvgk07365jyvb8rzfcl43av"; depends=[plyr RCurl XML]; }; rsed = derive2 { name="rsed"; version="0.1.2"; sha256="1rk7wkidvdn1d39a11cbgglz2dg74bbv3v1ijjdx903kgwg3nnrc"; depends=[Smisc]; }; rseedcalc = derive2 { name="rseedcalc"; version="1.3"; sha256="18zmpjv6g8f7pmvqlp6khxyys9kdnq5x4zxwb6gwybsh4jxrymkp"; depends=[]; }; rsem = derive2 { name="rsem"; version="0.4.6"; sha256="16nsbp4s20396h2in0zymbpmsn24gqlbik0vgv86zhy1yg1rz9ia"; depends=[lavaan MASS]; }; rsgcc = derive2 { name="rsgcc"; version="1.0.6"; sha256="12f8xsg6abmhdgkrrc8sfzmv4i1pycq1g0jfad664d17yciw7rhh"; depends=[biwt cairoDevice fBasics gplots gWidgets gWidgetsRGtk2 minerva parmigene snowfall stringr]; }; rsggm = derive2 { name="rsggm"; version="0.3"; sha256="17yzvd5vs2avp0nzk7x9bi4d7p6n9nv7675qpgfpwkfqp25lax73"; depends=[glasso MASS Matrix QUIC]; }; rsimsum = derive2 { name="rsimsum"; version="0.3.3"; sha256="0h08klkdn84y32xlaafig1jj5ni79j4yx2pp3pg2qfmpimxcm44w"; depends=[checkmate ggplot2]; }; - rsinaica = derive2 { name="rsinaica"; version="0.5.0"; sha256="12jzbay7vm1ziqdjx8i7wkb3f354q95qfayasr3prl16sz80kpp7"; depends=[dplyr httr jsonlite lubridate stringr]; }; + rsinaica = derive2 { name="rsinaica"; version="0.6.0"; sha256="0ygr2mpvmqnv6a71cm93xss8g3pnmb5ax0fb88cjzax993m2l48v"; depends=[dplyr httr jsonlite lubridate stringr]; }; rslp = derive2 { name="rslp"; version="0.1.0"; sha256="06glpdsd309058kxww114j9sshvj6gw9g5sdm4zkmzq3cl91fa6h"; depends=[magrittr plyr stringi stringr]; }; rslurm = derive2 { name="rslurm"; version="0.4.0"; sha256="1ck4ky5d0pf8hnxz1ijbjk0nfyj1hfnhf9la5qrqw2spa09z82ki"; depends=[whisker]; }; - rsm = derive2 { name="rsm"; version="2.9"; sha256="1rj2qdlv44hbv1ipv7hdpssn90ypp6bfc7nqdaf9dak0bd6khwni"; depends=[estimability]; }; - rsnps = derive2 { name="rsnps"; version="0.2.0"; sha256="10g1b2i2mp0b4p78iiy83sz2jwz73xfjkhc6ih4ag2wmbdmwf9pb"; depends=[httr jsonlite plyr stringr XML]; }; + rsm = derive2 { name="rsm"; version="2.10"; sha256="0a6bxrb0qad40lnigqjv2pnwwzcwi1rcmh9gb1a1b00k1n3mnmlc"; depends=[estimability]; }; + rsnps = derive2 { name="rsnps"; version="0.3.0"; sha256="1ym58gqpvn708228pbkq1klvl60a60bwxwm0arzzad3wh1wansxj"; depends=[crul data_table jsonlite plyr stringr XML xml2]; }; rsoi = derive2 { name="rsoi"; version="0.3.0"; sha256="0syl90akbbg50pyhsa4nyq2r4psi2n6qg48a4nxprgz412n8rjbv"; depends=[dplyr lubridate readr]; }; - rsolr = derive2 { name="rsolr"; version="0.0.8"; sha256="1swhg7hnkdphnw0d9jrzn18nk2v5a6ny7n652fh8d0k88a27xx4d"; depends=[BiocGenerics graph RCurl restfulr rjson S4Vectors XML]; }; - rspa = derive2 { name="rspa"; version="0.2.1"; sha256="0m3h25jxfccdqy4gf3cls4wcdpw580yfmb3lvw4ndfva8lj2q6sy"; depends=[lintools validate]; }; - rsparkling = derive2 { name="rsparkling"; version="0.2.4"; sha256="0ykk8lvigi3hb5iz7rxsi3brf4ydg2kxmaks4vk0vrkanyifs7xp"; depends=[h2o sparklyr]; }; - rsq = derive2 { name="rsq"; version="1.0.1"; sha256="1c7604g48rcsbfk66xfwia1jaxlqsjiw19zx9pg51n8d6c0l17zb"; depends=[MASS]; }; + rsolr = derive2 { name="rsolr"; version="0.0.9"; sha256="1mxvzb7wvm1agv35r82pr1hxa3fimixcwf36j98qjlxj9p7valrw"; depends=[BiocGenerics graph RCurl restfulr rjson S4Vectors XML]; }; + rspa = derive2 { name="rspa"; version="0.2.3"; sha256="171bwyxbjx2w8fz87jsbaghqxgmmkaxixhia0kp2y33ns6fc1hy9"; depends=[lintools validate]; }; + rsparkling = derive2 { name="rsparkling"; version="0.2.11"; sha256="150lg0zdpnpcgrh10vh7fr8fmmq6qhvf8pc27fil4rq31k4aazr9"; depends=[h2o sparklyr]; }; + rsq = derive2 { name="rsq"; version="1.1"; sha256="0pvnyf875jybid16mg1y3dmnlrk1vahckhr5zaai1a0k4i6mh4jf"; depends=[MASS]; }; rstack = derive2 { name="rstack"; version="1.0.0"; sha256="19vbfmkd6ymadah1y1w5rn52f4hviddccyc6qj2cv5viqwbwws2z"; depends=[R6]; }; rstackdeque = derive2 { name="rstackdeque"; version="1.1.1"; sha256="0i1qqbfj0yrqbkad8bqc1qlxmyxpn7zycbnq83cdmfbilcmi87ql"; depends=[]; }; - rstan = derive2 { name="rstan"; version="2.17.3"; sha256="10fdasqbdwlisnm7hjmgl5f027ypfhni86d1c5fykb09g1pvkjz3"; depends=[BH ggplot2 gridExtra inline Rcpp RcppEigen StanHeaders]; }; - rstanarm = derive2 { name="rstanarm"; version="2.17.4"; sha256="1azggccxj6k8nrz8xlmsv42h0rvwmqfih8xxqn45v7fy9la006p0"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen rstan rstantools shinystan StanHeaders survival]; }; + rstan = derive2 { name="rstan"; version="2.18.1"; sha256="01cwm4vrlrrcqmda0dgr23bpav1rbb8xp53n9hl8x70995k4lpcf"; depends=[BH ggplot2 gridExtra inline loo pkgbuild Rcpp RcppEigen StanHeaders]; }; + rstanarm = derive2 { name="rstanarm"; version="2.18.1"; sha256="08md6kjxrq0cpgjj8jq69jxk21lhdf6arav2griz66mgkydg8xkm"; depends=[bayesplot BH ggplot2 lme4 loo Matrix nlme Rcpp RcppEigen rstan rstantools shinystan StanHeaders survival]; }; rstansim = derive2 { name="rstansim"; version="0.1.1"; sha256="09hg4ishzp6q90nrl94h21al0ad0jn7fr8brp8f0xa9cvkwlzjpg"; depends=[doRNG doSNOW foreach loo Rcpp rstan]; }; - rstantools = derive2 { name="rstantools"; version="1.5.0"; sha256="19rzcfiirw539hxs98j33gccwigdpwf3nj1w5jwwzank217wmgg4"; depends=[]; }; + rstantools = derive2 { name="rstantools"; version="1.5.1"; sha256="11dlrz3mj1j9qigh2qff0ixdcfds4ppxd37112yq8bn16b0idasw"; depends=[]; }; rstatscn = derive2 { name="rstatscn"; version="1.1.1"; sha256="0aj4x3lyrldpgh90v90qbxylndacn5ri5yqff3qy53q45ar7yji3"; depends=[httr jsonlite]; }; rstiefel = derive2 { name="rstiefel"; version="0.20"; sha256="1wrl7rc4nrnxjs26l9v36x3mpx33mjijk27nbzidwrhp9gppzz1i"; depends=[]; }; rstpm2 = derive2 { name="rstpm2"; version="1.4.2"; sha256="19cijqx1jblhgwzr0q1p7aaiajnrf5g9l4fw67p69nv4nljcypan"; depends=[bbmle fastGHQuad mgcv numDeriv Rcpp RcppArmadillo survival]; }; rstream = derive2 { name="rstream"; version="1.3.5"; sha256="1wprsnwl63cc4a6j5h18r09wlh32bq5z6hj6r5klp7rkpjchsplp"; depends=[]; }; - rstudioapi = derive2 { name="rstudioapi"; version="0.7"; sha256="133s75q2hr6jg28m1wvs96qrbc9c4vw87migwhkjqb88xxvbqhd5"; depends=[]; }; + rstudioapi = derive2 { name="rstudioapi"; version="0.8"; sha256="0d6r0in13k0rcyr6asanwy0a9dv4lizq6l2w913rr222pq6vrrck"; depends=[]; }; rsubgroup = derive2 { name="rsubgroup"; version="0.6"; sha256="1hz8rnbsl97ch6sjwxdicn2sjyn6cajg2zwmfp03idzpb3ixlk7l"; depends=[foreign rJava]; }; rsunlight = derive2 { name="rsunlight"; version="0.7.0"; sha256="0v2wrgq8fxvkf8sf4z4wi4bbvbskw5wzcplns9imwfmm3y2pabyi"; depends=[crul data_table jsonlite plyr stringr tibble]; }; rsurface = derive2 { name="rsurface"; version="1.1.0"; sha256="1pymbgvr72nqd66wap5wrcizzx2k9bfr6vkxv6dkvjmi8q7jl2gv"; depends=[plotly rsm]; }; @@ -10837,40 +11313,43 @@ in with self; { rsvd = derive2 { name="rsvd"; version="0.9"; sha256="1d71y4r27gpwsaq195yys301va8wdc2bvwxjk6501f7ma2yhl7y9"; depends=[]; }; rsvg = derive2 { name="rsvg"; version="1.3"; sha256="11mccgf6hfskg45wqc114sx3qy2r494y6axdf73z6xwhs1wpm97g"; depends=[]; }; rsyslog = derive2 { name="rsyslog"; version="1.0.1"; sha256="1i33bpv894jk7cixsvn85h1g532zj39f8dfqq8cyzgsav9wba2y4"; depends=[]; }; + rt_test = derive2 { name="rt.test"; version="1.18.7.9"; sha256="0ywkdjvfzmrmmsfkz4jbhwzbzv7wivx80xy8wr92dch1862h6ias"; depends=[]; }; rt3 = derive2 { name="rt3"; version="0.1.2"; sha256="1fqbymkz4csavkxrs26glzrh0kw3qy9x5smgddgda9a1dxh9ljkm"; depends=[]; }; - rtable = derive2 { name="rtable"; version="0.1.5"; sha256="1a9x0qcbp96wg86nbvx25yh5viwvf5sqb41z3cvr5i7br2ji8n5i"; depends=[knitr ReporteRs shiny tidyr xtable]; }; rtape = derive2 { name="rtape"; version="2.2"; sha256="0q7rs7pc1k1kayr734lvh367j5qig2nnq5mgak1wbpimhl7z3wm7"; depends=[]; }; - rtdists = derive2 { name="rtdists"; version="0.8-3"; sha256="1p8j50snlfc4rs7fvzd2ny1i47vy3d6xmik4rhyppvv4kr47nwhm"; depends=[evd gsl msm Rcpp]; }; + rtdists = derive2 { name="rtdists"; version="0.9-0"; sha256="14ccpn67xdsx5fhwiw32z55gldzdcpaparqb1zpls2r233wg0v99"; depends=[evd gsl msm Rcpp]; }; rtematres = derive2 { name="rtematres"; version="0.2"; sha256="1d0vrprvnlk4hl2dbc6px9xn9kx9d1qvlqxd798hzda6qg5wwvf2"; depends=[gdata plyr RCurl XML]; }; rtext = derive2 { name="rtext"; version="0.1.20"; sha256="0455rwfxmpgb4qb925ildqr4km4ndgqjxgvk90x2dhfivgmmn60k"; depends=[digest hellno magrittr R6 Rcpp RSQLite stringb]; }; rtf = derive2 { name="rtf"; version="0.4-13"; sha256="1gwvw98lnym305z9awjaximrmkl4kkki59blbwqs2js42iqcx2m3"; depends=[R_methodsS3 R_oo]; }; rtfbs = derive2 { name="rtfbs"; version="0.3.9"; sha256="02irj6c7nfgp42yb5zdmhbr5pi09xgx0z76d1ccfczjf0r1cyvfz"; depends=[rphast]; }; - rticles = derive2 { name="rticles"; version="0.4.1"; sha256="1f2a60jmlsiga377ihhy8sm9amqn7fd91sd4vx682b97hfh3zn39"; depends=[knitr rmarkdown yaml]; }; - rtide = derive2 { name="rtide"; version="0.0.4"; sha256="0i3mf3818s62mmn315brv2axpwiiz646k5hv8z26z7s4ahxavrc0"; depends=[abind datacheckr lubridate magrittr plyr stringr tibble tidyr]; }; + rticles = derive2 { name="rticles"; version="0.6"; sha256="1rdjk5h9li55j3r7pj7q82z2y4phxqwybr3375dyajymd370gsys"; depends=[knitr rmarkdown tinytex xfun yaml]; }; + rtide = derive2 { name="rtide"; version="0.0.5"; sha256="0ns79xkkl141bbns8zlvx3gf48k4a03qa21pjyhnhgkm9lsihwfc"; depends=[abind checkr lubridate]; }; rtiff = derive2 { name="rtiff"; version="1.4.5"; sha256="0wpjp8qwfiv1yyirf2zj0696zb7m7fpzn953ii8vbmgzhakgr8kw"; depends=[pixmap]; }; - rtika = derive2 { name="rtika"; version="0.1.8"; sha256="1lkcrs3cdfcgy86vbvjfxqs2jxw4imz16s6c3pxhdl8r0byjdndk"; depends=[curl rappdirs sys]; }; + rtika = derive2 { name="rtika"; version="1.1.19"; sha256="0qh6qq3hxhsa2nb3bn468h87k54xjq8f0jj5rixcp95p4krr6wn7"; depends=[curl digest rappdirs sys]; }; rtimes = derive2 { name="rtimes"; version="0.5.0"; sha256="1z8iaxkvd99fnk46vzbw6lax2qayng6s5n1sxn78kvp8py552f61"; depends=[crul data_table dplyr jsonlite tibble]; }; rtimicropem = derive2 { name="rtimicropem"; version="1.3"; sha256="1z7nrmzwdgz7fy2i23rl07jd39sdxqsdmmmkaaxzagj7whd58inj"; depends=[changepoint dplyr ggplot2 knitr lazyeval lubridate pathological R6 rbokeh readr stringr tibble tidyr]; }; rtip = derive2 { name="rtip"; version="1.1.1"; sha256="0lfny8nvgnf90xsmgmr32nzjbw8117m4vw7d0bc3xm4pzpnymjdq"; depends=[boot ggplot2 mvtnorm plyr rootSolve]; }; rtk = derive2 { name="rtk"; version="0.2.5.4"; sha256="1nh757l4ih5pmmh7b84ca1f5wpz9mcksdb0a4rvs2hhgap38ihg9"; depends=[Rcpp]; }; - rtkore = derive2 { name="rtkore"; version="1.5.1"; sha256="03vmgrsil5yrrs3ndgqvfcwv9plcawc8v2y2x9nwcashxg40djn6"; depends=[Rcpp]; }; + rtkore = derive2 { name="rtkore"; version="1.5.5"; sha256="0srk0ih4gbmhb1pl6zf8sjwrkdmgws9cl1397fcqv6l3bc376622"; depends=[inline Rcpp]; }; rtop = derive2 { name="rtop"; version="0.5-14"; sha256="1wwllckginnzisapbklpsizy47db24r83xahq4qsd8zhqvv9yj33"; depends=[gstat sp]; }; rtrek = derive2 { name="rtrek"; version="0.1.0"; sha256="05dzqylvv8rgh0sxl2qa2zvxnmilwmxsa6f99mh6ygcf9pal8jzd"; depends=[dplyr jsonlite magrittr purrr]; }; rtrends = derive2 { name="rtrends"; version="0.1.0"; sha256="04xdggf36m294drb9z8khdjr6fgsg4bwkb4mmbbvqfzjpq4mq4y1"; depends=[dplyr lubridate tidyr]; }; - rtrim = derive2 { name="rtrim"; version="2.0.4"; sha256="1xl3xai768idnfc30hp20cnpq3a07049p7vpkqpdrpla6a8zhvqk"; depends=[]; }; - rts = derive2 { name="rts"; version="1.0-45"; sha256="11gvgj5bqiacsf51sg4dj7jpsjgdj6j26vqc8by15325a4c804ml"; depends=[raster RCurl sp xts zoo]; }; + rtrim = derive2 { name="rtrim"; version="2.0.6"; sha256="18fvi8zbf9dqwi5x0sgy2aay5565ldvqpispqqb5gx2lwb9qra2r"; depends=[]; }; + rts = derive2 { name="rts"; version="1.0-47"; sha256="0xlwg6c49clb1zyfw8s8qhwdbyl0rwx7ljy8j2rq7hjh07541hdx"; depends=[raster RCurl sp xts zoo]; }; + rtsdata = derive2 { name="rtsdata"; version="0.1.1"; sha256="1xh5wsc330x49zcid8hpv9jarbp64dgq10k6lbjjsx1n7dg9qm3z"; depends=[alfred anytime curl data_table mongolite Quandl quantmod xts zoo]; }; rtson = derive2 { name="rtson"; version="1.3"; sha256="1gwvk7nmq9bz90jy1zh7lhr735iw804pmwxykdpaigcsnxk7zx03"; depends=[R6]; }; - rtsplot = derive2 { name="rtsplot"; version="0.1.0"; sha256="1iz7m1r46d1b84fbbkby42ry8plp226gh38krrdgzshfcf2a6856"; depends=[quantmod RColorBrewer TTR xts zoo]; }; - rtweet = derive2 { name="rtweet"; version="0.6.7"; sha256="0blyggy559cginfavmwzli1ibjbh1lbipyyi4bs2h9mvx9iwkl2l"; depends=[httr jsonlite magrittr tibble]; }; + rtsplot = derive2 { name="rtsplot"; version="0.1.1"; sha256="0dkv8pl2937zfpcwyy9ms1ak29nv9mxyb8w6bh2ns8figjp11zmp"; depends=[quantmod RColorBrewer xts zoo]; }; + rtweet = derive2 { name="rtweet"; version="0.6.8"; sha256="0r2lyiy3wa7v7wq72fvckw3bbff9sjy5bqpag766pl1rwfsbphjm"; depends=[httr jsonlite magrittr tibble]; }; rtype = derive2 { name="rtype"; version="0.1-1"; sha256="0wjf359w7gb1nrhbxknzg7qdys0hdn6alv07rd9wm6zynnn1vwxy"; depends=[]; }; - rtypeform = derive2 { name="rtypeform"; version="0.3.3"; sha256="13nqlgi4wwby8ka014ggilnh2m4qr940zbsks27zfd7q56ng7sbq"; depends=[httr jsonlite purrr tibble]; }; + rtypeform = derive2 { name="rtypeform"; version="2.0.0"; sha256="00as49l9plncc25bn93x36hpxnxachsh382ivhq6k9d9gi8424c0"; depends=[dplyr glue httr jsonlite lubridate purrr tibble tidyr]; }; rubias = derive2 { name="rubias"; version="0.1.0"; sha256="0k8f1aaj3zpxqkhzjfl7iyyx7pjssp5lldajjsghw110j75qksh4"; depends=[dplyr ggplot2 gtools magrittr Rcpp readr rlang stringr tibble tidyr]; }; rucm = derive2 { name="rucm"; version="0.6"; sha256="1n6axmxss08f2jf5impvyamyhpbha13lvrk7pplxl0mrrrl5g0n8"; depends=[KFAS]; }; rucrdtw = derive2 { name="rucrdtw"; version="0.1.3"; sha256="0wbh9zbgqf5bk1ix5qry18lhgdqk90pn5xnv401268gldjy4z777"; depends=[Rcpp]; }; rugarch = derive2 { name="rugarch"; version="1.4-0"; sha256="0b0rq88v93945g7pr6xin7wfdm8zl2vw8hxwa2kfak4xnrrprsyy"; depends=[chron expm ks nloptr numDeriv Rcpp RcppArmadillo Rsolnp SkewHyperbolic spd xts zoo]; }; + ruin = derive2 { name="ruin"; version="0.1.1"; sha256="124xs1c2mjfy6z0bp83rwkqw2y73g77xwn3q4yd2xw0v2frnpvpz"; depends=[ggplot2]; }; ruler = derive2 { name="ruler"; version="0.1.3"; sha256="000hnnnz3zccpshpi725f67kbfr3hnpgr48zyz24pbynyz3d7vap"; depends=[dplyr keyholder rlang tidyr]; }; runittotestthat = derive2 { name="runittotestthat"; version="0.0-2"; sha256="15zdcvqkr5ivq6wk6dw8k6diginc6z7mdc18pswim90d99j2g9sm"; depends=[assertive RUnit]; }; runjags = derive2 { name="runjags"; version="2.0.4-2"; sha256="035sxmh0b0m6dwz8qbpsmw2p7ihkx3cxgkhj27i0j6dsjryl3x4p"; depends=[coda lattice]; }; + runner = derive2 { name="runner"; version="0.1.0"; sha256="0gzh8438pvpg5wwirh0hn5s8fnd8cb6y66syndxarr06v9jy1gza"; depends=[Rcpp]; }; rusda = derive2 { name="rusda"; version="1.0.8"; sha256="0xx72jjf1pyixwpnvvgx5n2vc5gl46bam1caav043iqki68wb338"; depends=[foreach httr plyr RCurl stringr taxize testthat XML]; }; rusk = derive2 { name="rusk"; version="0.1.1"; sha256="0a6vbcnfzlfq9fmibiy0cwcfix65qhxq4f7wc7d53riga82s00lk"; depends=[dplyr ggforce ggplot2 reshape2 shiny tidyr]; }; rust = derive2 { name="rust"; version="1.3.5"; sha256="16jrf1nfn3wnkrbzp5bjkqi0q0vpy82ra6f0vs1pyk5hw5jhshg9"; depends=[Rcpp RcppArmadillo spatstat]; }; @@ -10879,15 +11358,17 @@ in with self; { rvHPDT = derive2 { name="rvHPDT"; version="3.0"; sha256="05nrfnyvb8ar7k2bmn227rn20w1yzkp1smwi4sysc00hyjrlyg8s"; depends=[gtools]; }; rvTDT = derive2 { name="rvTDT"; version="1.0"; sha256="09c2fbqnlwkhaxfmgpsdprl0bb447ajk9xl7qdlda201fvxkdc8v"; depends=[CompQuadForm]; }; rvalues = derive2 { name="rvalues"; version="0.6.3"; sha256="1bsdvwcijb75f27c8padjx8663as667axc4skwa6xgv5y423kbd0"; depends=[]; }; - rvcheck = derive2 { name="rvcheck"; version="0.1.0"; sha256="0b3vw1r4aglciwmjqm8dvlizydydwcgnpwkzib2g9k69a355iyi0"; depends=[]; }; + rvcheck = derive2 { name="rvcheck"; version="0.1.1"; sha256="116cs1ih5m55jyp0f5whjvnbn4gpi4550qkbwzw0mq254x2r8vdg"; depends=[rlang]; }; rversions = derive2 { name="rversions"; version="1.0.3"; sha256="0i2gi05nrvknr7g89rbppkswyfcwwd4r9gp75fdfhpah8sgq1l11"; depends=[curl xml2]; }; rvertnet = derive2 { name="rvertnet"; version="0.7.0"; sha256="01z3ij5z21v901hz4l9173r4pa9jz2nl7bx086ka1bxvcy0dgqgj"; depends=[crul dplyr ggplot2 jsonlite maps]; }; rvest = derive2 { name="rvest"; version="0.3.2"; sha256="04mv99z8dixywx96kfy4215g6ib23s7qvd77hcf9pxqxzcvqhvhd"; depends=[httr magrittr selectr xml2]; }; rvg = derive2 { name="rvg"; version="0.1.9"; sha256="0r2amwygazq1sff8fl0k618fxs2d5pxp5ryz7kqyjkcnxfghgnxf"; depends=[gdtools officer Rcpp xml2]; }; rvgtest = derive2 { name="rvgtest"; version="0.7.4"; sha256="1lhha5nh8fk42pckg4ziha8sa6g20m0l4p078pjj51kz0k8929ng"; depends=[]; }; - rvinecopulib = derive2 { name="rvinecopulib"; version="0.2.8.1.0"; sha256="0n92822pgspq17wy52zmvch2ag9fc577y64myzg5b7hz7fqd96mq"; depends=[assertthat BH cctools kde1d lattice Rcpp RcppEigen RcppThread]; }; - rwalkr = derive2 { name="rwalkr"; version="0.3.3"; sha256="03kpv4hvlajm09cqrlihia62pcj1skakx28ci4mgbfgpjy6l4jsl"; depends=[dplyr httr tibble tidyr]; }; + rviewgraph = derive2 { name="rviewgraph"; version="1.2"; sha256="0qw1fdfwg2763a1k1qmryblw5rpagsi5p70rs7fj256zfcjvwrz8"; depends=[rJava]; }; + rvinecopulib = derive2 { name="rvinecopulib"; version="0.3.0.1.1"; sha256="09zs1ckc5c0z4xg6h348v8nig37b400mkwsa0z4hn7rrhjf5i3gf"; depends=[assertthat BH cctools kde1d lattice Rcpp RcppEigen RcppThread wdm]; }; + rwalkr = derive2 { name="rwalkr"; version="0.3.4"; sha256="1zx58l92finzkrivp214hbldkcbpdjgx0k6bwz22spp0lgnzi9mp"; depends=[dplyr httr tibble tidyr]; }; rwars = derive2 { name="rwars"; version="1.0.0"; sha256="0kmwpr6gn3xsf0pqx153vblpjbhc34mzlgyv8xb2nw78nf8znfij"; depends=[httr]; }; + rwavelet = derive2 { name="rwavelet"; version="0.1.0"; sha256="15shy8v659r3qnx32hrq6zn5fwinwg6aiys71f45k0s9jhj973ki"; depends=[dplyr signal]; }; rwc = derive2 { name="rwc"; version="1.11"; sha256="1qhgkbkp4nz0wq5c4x8232xiszpiyzcdklfgvpnx4cbp3bbfdi4g"; depends=[MASS Matrix mvtnorm raster]; }; rwfec = derive2 { name="rwfec"; version="0.2"; sha256="0wmalfms59zi8jdn2s2qbcdckfkifl9vg19hzx4389mm5gk6qsbh"; depends=[Rcpp]; }; rworldmap = derive2 { name="rworldmap"; version="1.3-6"; sha256="1q1h0n9qr0m5pdx10swrh9ddsvdj8kv5nqngrf3lnx9rg9iwivjk"; depends=[fields maptools sp]; }; @@ -10897,9 +11378,11 @@ in with self; { rwunderground = derive2 { name="rwunderground"; version="0.1.8"; sha256="02p26gkicd5v511kb04p1h3wxj57r7j5vr97n3ibywc6ivz7nqxa"; depends=[countrycode dplyr httr lubridate tibble]; }; rxSeq = derive2 { name="rxSeq"; version="0.99.3"; sha256="0g0n2pzbssz61psghjp1vrlspgph4s39x1k1zhcz7ivdn5pjb2nx"; depends=[MASS numDeriv VGAM]; }; rxylib = derive2 { name="rxylib"; version="0.2.1"; sha256="0qfdd7z9as6igc82i8dbvjz03jk8scxz599jw8xm69y5qs5zf104"; depends=[BH Rcpp]; }; + rym = derive2 { name="rym"; version="0.4.0"; sha256="1vxc6nk0d90ggwymdyfwaxzsd91zmd3bspz0chj7iaki8cjbbjdw"; depends=[httr stringr]; }; ryouready = derive2 { name="ryouready"; version="0.4"; sha256="1d9z3paxcrkwsgn5g83x57jwz2iqarks30x0bwg48i5ispw6xbr3"; depends=[car ggplot2 stringr]; }; rysgran = derive2 { name="rysgran"; version="2.1.0"; sha256="1l2mx297iyipap8cw2wcw5gm7jq4076bf4gvgvij4q35vp62m85z"; depends=[lattice soiltexture]; }; - rzmq = derive2 { name="rzmq"; version="0.9.3"; sha256="04rb54gr1wr0nczxnhk5jbk9ar65yn2vs8bsa41i1hfhzjhnsvxb"; depends=[]; }; + rzeit2 = derive2 { name="rzeit2"; version="0.2.0"; sha256="0r74i14bnpw1dp8vzcx8kf87a8v4g3r4wbs4c87s9s4ingvsbl64"; depends=[anytime httr jsonlite openssl rvest stringr xml2]; }; + rzmq = derive2 { name="rzmq"; version="0.9.4"; sha256="1bbkgxqpjmy3ma76cc9kjxhhwi632di4mfarlgxi2g42dmsxmyq3"; depends=[]; }; s2 = derive2 { name="s2"; version="0.4-0"; sha256="1mpivllq3r3kn7msb7qn9h8fr31jl5cvfg1pdq1wi69k4bznd8y0"; depends=[Rcpp]; }; s20x = derive2 { name="s20x"; version="3.1-27"; sha256="021f9l34svx42mnzi080rr44sxz9zjvcnxljakcag02r4hl52pcp"; depends=[]; }; s2dverification = derive2 { name="s2dverification"; version="2.8.0"; sha256="13cjzxrjwahjhdw5q8lpbwgywgswqrcnj7rkff9kraan9lj83bkk"; depends=[abind bigmemory GEOmap geomapdata mapproj maps NbClust ncdf4 plyr SpecsVerification]; }; @@ -10915,9 +11398,9 @@ in with self; { sRDA = derive2 { name="sRDA"; version="1.0.0"; sha256="0g11smn4adm3b79m9w7wzcragxggkf8rrrsgj2yzdhm1d7zzjwbk"; depends=[doParallel elasticnet foreach Matrix mvtnorm]; }; sROC = derive2 { name="sROC"; version="0.1-2"; sha256="0cp6frhk9ndffb454dqp8fzjrla76dbz0mn4y8zz1nbq1jzmz0d3"; depends=[]; }; sSDR = derive2 { name="sSDR"; version="1.2.0"; sha256="1fqsglqzsbzdvcdnwwf7mg6x20zfpw66x63r6avac3w1pz3n7kvx"; depends=[MASS Matrix]; }; - sValues = derive2 { name="sValues"; version="0.1.5"; sha256="0y234nci9pnc10xyiwxllvb5b48ajga2y0k5fv9izlwkbc5wpiaw"; depends=[caTools ggplot2 reshape2]; }; + sValues = derive2 { name="sValues"; version="0.1.6"; sha256="0830f4w6jgpiysk0vz0bxaxwa8m3k94fgj9l3qb42r3jjf9cdn29"; depends=[ggplot2 reshape2]; }; saasCNV = derive2 { name="saasCNV"; version="0.3.4"; sha256="12h5vrl55sb4wmx0hzib5iax8p0q2qzk19h15r0asfkh9l7qz94l"; depends=[DNAcopy RANN]; }; - sabre = derive2 { name="sabre"; version="0.2.0"; sha256="1mcjchw1hw1ry5vkl50jrz4bm82b4fqzhgn2xp2kdzwsgvq61dbm"; depends=[dplyr entropy rlang sf tibble tidyr]; }; + sabre = derive2 { name="sabre"; version="0.2.1"; sha256="0zfw3mb21p48xjjwvz7p5q5ckh1sk17rymkkhln97jjfy5q1zwz8"; depends=[dplyr entropy rlang sf tibble tidyr]; }; sac = derive2 { name="sac"; version="1.0.1"; sha256="1rl5ayhg5y84fw9w3zf43dijjlw9x0g0w2z4haw5xmxfni72ms8w"; depends=[]; }; saccades = derive2 { name="saccades"; version="0.1-1"; sha256="138a6g3hjmcyvflpxx1lhgxnb8svrynplrjnvzij7c4bzkp8zip6"; depends=[zoom]; }; sadists = derive2 { name="sadists"; version="0.2.3"; sha256="17jlzx5h5l1w7riz0rs99w31n6lxnnxwzbzqn2z5r292j2nxvmkw"; depends=[hypergeo orthopolynom PDQutils]; }; @@ -10926,33 +11409,36 @@ in with self; { sae2 = derive2 { name="sae2"; version="0.1-1"; sha256="0fbbh2s0gjhyhypaccnd37b5g2rhyzq7mrm6s0z36ldg1pzi4dd9"; depends=[MASS]; }; saeRobust = derive2 { name="saeRobust"; version="0.2.0"; sha256="1bdfrsm59xwkga0kxl3r5n83mhhkyzj7gplrgx26gyflashyd1zc"; depends=[aoos assertthat ggplot2 magrittr MASS Matrix memoise modules pbapply Rcpp RcppArmadillo spdep]; }; saeSim = derive2 { name="saeSim"; version="0.9.0"; sha256="19l41qpwspccphmgxi20p7f473lxxh8d86b0wyy5jq24phhd8awx"; depends=[dplyr functional ggplot2 MASS parallelMap spdep]; }; + saemix = derive2 { name="saemix"; version="2.2"; sha256="1gp9xww9q3cq9dr6nifp4wlyg9gmamab845py1ag07vnr2gfwx5c"; depends=[]; }; saery = derive2 { name="saery"; version="1.0"; sha256="09x1v627llqbpiwkh1wr0z7gsndfdrjzag2hprhq1adbzh05k47z"; depends=[]; }; safeBinaryRegression = derive2 { name="safeBinaryRegression"; version="0.1-3"; sha256="1g68r6pp5l41rbgyfqgcha1gpsisnl0ybdmdqr4ylr43f61dpgvd"; depends=[lpSolveAPI]; }; - safer = derive2 { name="safer"; version="0.2.0"; sha256="0659xn8jzd5md2mm71p4036ljrfvlhkfshsgidx7l2k9ig532059"; depends=[assertthat base64enc sodium]; }; + safer = derive2 { name="safer"; version="0.2.1"; sha256="1lmhaj9y0hi4ybxfkllxl99vsagcg73sy4kkcmlvn3bs69jky1r9"; depends=[assertthat base64enc sodium]; }; salesforcer = derive2 { name="salesforcer"; version="0.1.2"; sha256="02a4xzwphy5zfkd0qza6cm2n7dpf71bmc6r78gj17w4amrp3k5y5"; depends=[dplyr httr jsonlite lubridate purrr readr XML xml2]; }; + salty = derive2 { name="salty"; version="0.1.0"; sha256="1dxq62yrkv416fy09l03slc7ci6mnwiyvjlsxhbqnj8yjy3kbhr6"; depends=[assertthat purrr stringr]; }; sambia = derive2 { name="sambia"; version="0.1.0"; sha256="15yz5lrjav5bs8m52crg3l43xmi4gf7wydji76p181ssyg43z2ln"; depends=[dplyr e1071 FNN mvtnorm pROC ranger smotefamily]; }; samon = derive2 { name="samon"; version="4.0.0"; sha256="0pvv93ahh0i69ncc3sic9481wd5rv5dfxysxyzkl61ds3yvrr09v"; depends=[]; }; sampSurf = derive2 { name="sampSurf"; version="0.7-4"; sha256="0azs8d1d4cp5vzrlzpn2lbqmbha6rxq109apg6hr2hf7i81g19d7"; depends=[boot lattice latticeExtra raster rasterVis sp]; }; sampleSelection = derive2 { name="sampleSelection"; version="1.2-0"; sha256="1s3p5fvvxkjkm6vjpxi3rw8ncbmyvqpfb0gghcvf2sspdyzam1s2"; depends=[Formula maxLik miscTools mvtnorm systemfit VGAM]; }; - sampler = derive2 { name="sampler"; version="0.2.0"; sha256="00c5blf8gfsj8ksf3jwksg3pkh7m39mk23r8v9lkqcp1y91z5p0i"; depends=[dplyr reshape splitstackshape tidyr]; }; + sampler = derive2 { name="sampler"; version="0.2.2"; sha256="02dk16hywmdrhaqf18dis7canq433wm7pn0haq10h49qav16kj55"; depends=[dplyr purrr reshape tidyr]; }; samplesize = derive2 { name="samplesize"; version="0.2-4"; sha256="0n6z7jmf665lbj3g1mjy87a9fh53z85546bhrkmkgsysb0r9q6iq"; depends=[]; }; - samplesize4surveys = derive2 { name="samplesize4surveys"; version="3.1.2.400"; sha256="16q8pird6ic7001i3gkwqb2rlak9l853bf2m1y9njmdprsjs82yl"; depends=[TeachingSampling timeDate]; }; + samplesize4surveys = derive2 { name="samplesize4surveys"; version="3.6.1.0"; sha256="0qkzhqr67x5rkahbyr5j2nksf0l0jwxsdl19p5gfx7j5kqzlifwq"; depends=[TeachingSampling timeDate]; }; samplesizeCMH = derive2 { name="samplesizeCMH"; version="0.0.0"; sha256="0gdywqmylid4fkz5syzf1wgcan71whhm9gjylmsg4p05hlwvpv1d"; depends=[]; }; samplesizelogisticcasecontrol = derive2 { name="samplesizelogisticcasecontrol"; version="0.0.6"; sha256="1xznql86r6snkkmk9g05jhdam06pr0qmg40mdzasl291nc50v5aa"; depends=[mvtnorm]; }; sampling = derive2 { name="sampling"; version="2.8"; sha256="06pj7dan0mknpsblmlnk7am78qrnwgnql5vvx7vmbfvib7rj6s9m"; depends=[lpSolve MASS]; }; samplingDataCRT = derive2 { name="samplingDataCRT"; version="1.0"; sha256="0ah3fi2sn642c8nicikhjhl1hdsjzshrf1j02swq0jaqggcqjdvk"; depends=[mvtnorm]; }; samplingEstimates = derive2 { name="samplingEstimates"; version="0.1-3"; sha256="1srdchlpxksfdqhf5qdvl7nz0qsxkxww7hzqj0q71asbzlq3am3p"; depends=[samplingVarEst]; }; - samplingVarEst = derive2 { name="samplingVarEst"; version="1.1"; sha256="1ffdw7s3jf5xfcbiqbrk4f3d0ym1s690wlc24yvhp5fvh5rghjn3"; depends=[]; }; + samplingVarEst = derive2 { name="samplingVarEst"; version="1.3"; sha256="031iwgiw7dcncw1smxidn3kyvl0n06j5ag4pbhnicfqpj0pnx3l3"; depends=[]; }; samplingbook = derive2 { name="samplingbook"; version="1.2.2"; sha256="1szx9bdlxxn2yhy9i362fcscn5cydvrkw9kggr7yqb715k5n1j6n"; depends=[pps sampling survey]; }; - samr = derive2 { name="samr"; version="2.0"; sha256="0rsfca07pvmhfn7b49yk2ycw00wsq6dmrpv9haxz8q0xv7n5n2q9"; depends=[impute matrixStats]; }; + samr = derive2 { name="samr"; version="3.0"; sha256="01km0f7qgm73x19vbvsxl083hs1dq4dj8qm5h64cxbf20b08my15"; depends=[GSA impute matrixStats openxlsx shiny shinyFiles]; }; sand = derive2 { name="sand"; version="1.0.3"; sha256="0h7djria9v75gqcygjcfznpchqgxjqc6b43arvq9ni1xjrq8sszf"; depends=[igraph igraphdata]; }; - sandwich = derive2 { name="sandwich"; version="2.4-0"; sha256="1h6c12cfv2x42laxf6ifxfk9hqzagvvvimzak88fv8vnxnf5nc9l"; depends=[zoo]; }; + sandwich = derive2 { name="sandwich"; version="2.5-0"; sha256="168kq5kk34xbhfsxsanard9zriyp6cw0s09ralzb57kk42pl9hbc"; depends=[zoo]; }; sanitizers = derive2 { name="sanitizers"; version="0.1.0"; sha256="1c1831fnv1nzpq8nw9krgf9fm8v54w0gvcn4443b6jghnnbhn2n6"; depends=[]; }; sankey = derive2 { name="sankey"; version="1.0.2"; sha256="0jvcr2bn69aklfbgj4hbsrc047mymrx0jmsg26m0g6w7n1igqvcw"; depends=[simplegraph]; }; sanon = derive2 { name="sanon"; version="1.5"; sha256="1iikm7ivlz87kbq0ax9r1dz29zdq1kmhxd2imzc4hkvr1rwgciv6"; depends=[]; }; santaR = derive2 { name="santaR"; version="1.0"; sha256="10g4z951mpxw9d21s5f6zwfch5xs9vx812fb0wyrbw9s8drmlbkh"; depends=[doParallel foreach ggplot2 gridExtra iterators pcaMethods plyr reshape2 shiny shinythemes]; }; sapa = derive2 { name="sapa"; version="2.0-2"; sha256="056xlh14dnzq4x7sbp7ff2k61jxy7110a742b502vz549qfrr5ds"; depends=[ifultools splus2R]; }; - sarima = derive2 { name="sarima"; version="0.5-2"; sha256="00xlfd8hrplxn66k2nfc7ivyacrr6rqgsv9ylsjynibpidvkkn17"; depends=[FitAR FitARMA lagged ltsa PolynomF portes Rdpack]; }; + sarima = derive2 { name="sarima"; version="0.7.6"; sha256="1x0qxvq2sax8c2x3max4ghhdrxcyji92vdz4bg5jkpakrn4ilm8a"; depends=[FitAR FitARMA Formula KFAS lagged ltsa numDeriv PolynomF Rcpp RcppArmadillo Rdpack]; }; + sars = derive2 { name="sars"; version="1.0.0"; sha256="055h2sldx0yiqipk5rpxpskh7hz2d5qjvylv72rwq7s76jbnyqnn"; depends=[cli crayon dplyr nortest numDeriv]; }; sas7bdat = derive2 { name="sas7bdat"; version="0.5"; sha256="0qxlapb6wdhzpwlmzlhscy3av7va3h6gkzsppn4sx5q960310an3"; depends=[]; }; sasMap = derive2 { name="sasMap"; version="1.0.0"; sha256="11vhhxhakqm1gsb3p4s4966sapmrqfyw79zfppbx5lnqi3xr0ngn"; depends=[readr stringi stringr]; }; satellite = derive2 { name="satellite"; version="1.0.1"; sha256="1g8zzlsdvb56l2jph7i5wjgbpyx5dkwa3nv8mzmg0qyh3zd9pyi0"; depends=[plyr raster Rcpp]; }; @@ -10960,31 +11446,36 @@ in with self; { saturnin = derive2 { name="saturnin"; version="1.1.1"; sha256="0cjp4h1s9ivn17v8ar48mxflaj9vgv92c8p9l2k5bc9yqx9mcs36"; depends=[Rcpp RcppEigen]; }; saves = derive2 { name="saves"; version="0.5"; sha256="1b4mfi2851bwcp0frx079h5yl6y1bhc2s8ziigmr8kwy1y1cxw10"; depends=[]; }; saws = derive2 { name="saws"; version="0.9-6.1"; sha256="0w40j6xczqs74z1z3na4510w06px7yn55s2mw9mddd6736l56fv1"; depends=[gee]; }; + sazedR = derive2 { name="sazedR"; version="1.0.0"; sha256="1cpc27rla0wn19fjxr0rflmmd4f1rh5phprny39abwx81nqx8s2p"; depends=[bspec fftwtools forecast pracma signal zoo]; }; sbart = derive2 { name="sbart"; version="0.1.1"; sha256="0552dbdj7rm1h7dbl34m4r4disra6x3p919d9c4719ks88i78255"; depends=[LaplacesDemon msm Rcpp]; }; sbfc = derive2 { name="sbfc"; version="1.0.1"; sha256="1xz8h1m5d5ahrz4wsy55amd5mxh3acjs5qmcn7gl6yh3pn0c8phf"; depends=[DiagrammeR discretization Matrix Rcpp RcppArmadillo]; }; sbgcop = derive2 { name="sbgcop"; version="0.980"; sha256="0vmg8b4462qghlyx6hq0raf9xqvygzgwi5y0cbqcljhmbmqjrwxs"; depends=[]; }; sbioPN = derive2 { name="sbioPN"; version="1.1.0"; sha256="0yvg55xnkhm35hfl7rldy2grb26hm4a68jr4x9n45fs7hhdylxri"; depends=[]; }; + sbl = derive2 { name="sbl"; version="0.1.0"; sha256="1wxzscii0kp55sngmjccrqvc8zm1zamfh406r12irrz2wbxwqnkw"; depends=[]; }; sbmSDP = derive2 { name="sbmSDP"; version="0.2"; sha256="1sl46lqi6w0s7ghv4bywhic56cm2vib3kawprga760m6igargx4y"; depends=[Rcpp RcppArmadillo]; }; + sboost = derive2 { name="sboost"; version="0.1.0"; sha256="1pnl64yyppffi730rp230cfhwfnpzn7s8dcii3k0m9in3z31j002"; depends=[dplyr Rcpp rlang]; }; sbpiper = derive2 { name="sbpiper"; version="1.9.0"; sha256="0pjq88ixk494wlz4nh5anbsn59mmh9wg564qh3vzwwqgxf1k61cg"; depends=[colorRamps data_table factoextra FactoMineR ggplot2 Hmisc reshape2 scales stringr]; }; sbrl = derive2 { name="sbrl"; version="1.2"; sha256="1d0f2mlzzcghhvqagrr954qa69b5v47milw3iazxihh8q1qlird2"; depends=[arules Rcpp]; }; sbtools = derive2 { name="sbtools"; version="1.1.6"; sha256="1wvd7xbkfyx88bi1vz30c6jb20fgsrcgpvkw4g4ym0966vhv1ca1"; depends=[curl httr jsonlite stringr]; }; + scBio = derive2 { name="scBio"; version="0.1.2"; sha256="01yqfqddgak0iaysphsf08mbkqbgbpr0gsyvkj3hpyj7kk1937h4"; depends=[doSNOW fields foreach LiblineaR limma raster sp]; }; + scPDSI = derive2 { name="scPDSI"; version="0.1.0"; sha256="1p5hrahklm85hawssp223hc1binyhz3fadd9qkr7hw3a47yn9cc5"; depends=[Rcpp]; }; scRNAtools = derive2 { name="scRNAtools"; version="1.0"; sha256="0x0lniqhq6q87y08kkkyvmk1g5b8i73hm3h86ba8rcv0v0n7ap9a"; depends=[ALL ConsensusClusterPlus corrplot edgeR foreach ggplot2 ggthemes Hmisc igraph lattice limma PerformanceAnalytics plyr reshape2 Rmisc Rtsne scatterplot3d survival TPEA]; }; scaRabee = derive2 { name="scaRabee"; version="1.1-3"; sha256="1yap3hi36f8hk93jn59nxrbgq8iw0xwkkm3pc2gb50cpcpaq41pd"; depends=[deSolve lattice neldermead]; }; scagnostics = derive2 { name="scagnostics"; version="0.2-4.1"; sha256="1azg1xlid63l9mcyns9yyl3a3hykbl0sl0h5jhyvzjzahfyanq53"; depends=[rJava]; }; scaleboot = derive2 { name="scaleboot"; version="0.3-4"; sha256="16shdj4b8pbdbphqzw7r5xzx6k2qfkr729inv21gkp9qcp4h0vrm"; depends=[mvtnorm pvclust]; }; - scales = derive2 { name="scales"; version="0.5.0"; sha256="0zg9wfzmsdjxpbld0nzv7hcpq5r0wazqxmn7grvvif2agj0w1z6v"; depends=[dichromat labeling munsell plyr R6 RColorBrewer Rcpp viridisLite]; }; - scalpel = derive2 { name="scalpel"; version="1.0.0"; sha256="0zk81q2f49vrbprlvjq3q4s2ak7rrlpj55rrfkqr8nq1vvi6nxd2"; depends=[gam igraph Matrix protoclust R_matlab SDMTools]; }; + scales = derive2 { name="scales"; version="1.0.0"; sha256="0353dkh3d7x78463c6ds80hcml59lrqwr8rlv82a8dnkxla4l7qc"; depends=[labeling munsell R6 RColorBrewer Rcpp viridisLite]; }; + scalpel = derive2 { name="scalpel"; version="1.0.1"; sha256="18mapg96xl9a1g85h5xhqsz1333hkc28z0ivfjaff933p1kc6sng"; depends=[gam igraph Matrix protoclust R_matlab SDMTools]; }; scalreg = derive2 { name="scalreg"; version="1.0"; sha256="06iqij1cyiw55ijzk2byrwh3m5iwsra7clx8l4v69rc236q8zbdi"; depends=[lars MASS]; }; - scam = derive2 { name="scam"; version="1.2-2"; sha256="04w0y2l4h3xddb6mzyhf0mcx6kbphrmjyfc59cqw9z88sssfrmm7"; depends=[Matrix mgcv]; }; + scam = derive2 { name="scam"; version="1.2-3"; sha256="0ray17cbfd25x61kvpbg1kplpgz1dak4kp3p6lalffgjh94qry27"; depends=[Matrix mgcv]; }; scan = derive2 { name="scan"; version="0.20"; sha256="1xyng9dlfmp7n2h91n4xy9lx3jm205gjiizdqk1yj1qw8mmahvqc"; depends=[nlme]; }; scanstatistics = derive2 { name="scanstatistics"; version="1.0.1"; sha256="147fhq34vqkq50bw0g3a112048s5jaxxcwm3iv5wykp8zl45msmz"; depends=[dplyr emdbook ismev magrittr plyr purrr Rcpp RcppArmadillo reliaR sets tibble tidyr]; }; scape = derive2 { name="scape"; version="2.3-2"; sha256="1i3k37r7lisrj1pblni5xn76kf6py52s4yd51fm78c3286yfaasf"; depends=[coda Hmisc lattice]; }; scar = derive2 { name="scar"; version="0.2-1"; sha256="04x42414qxrz8c7xrnmpr00r46png2jy5giwicdx6gx8jwrkzhzs"; depends=[]; }; scatr = derive2 { name="scatr"; version="1.0.1"; sha256="1c2z722i7d7qflh4mzb8kkix5i22wph98kwz2p98x2mhaml8802d"; depends=[cowplot ggplot2 ggridges ggstance jmvcore R6]; }; scatterD3 = derive2 { name="scatterD3"; version="0.8.2"; sha256="1cfh060ffwxy33b1f7n8mba1sbbwgx28mqn08im16dqbphkcmx1z"; depends=[digest ellipse htmlwidgets]; }; - scatterpie = derive2 { name="scatterpie"; version="0.1.0"; sha256="0ssfvnwwfyavzxxrbimb623pc0y72qvbis16sdr6fxvyfif4qmm5"; depends=[ggforce ggplot2 rlang tidyr]; }; + scatterpie = derive2 { name="scatterpie"; version="0.1.2"; sha256="0r3m3781jvzxr0ry7rhd085c0xl5620sf5zcq9nnfl613imwxj2b"; depends=[ggforce ggplot2 rlang rvcheck tidyr]; }; scatterplot3d = derive2 { name="scatterplot3d"; version="0.3-41"; sha256="152xqz9c70qab86mpgng049gxsg5f4fpf1m8dh93fb9v1avjd0sc"; depends=[]; }; - scclust = derive2 { name="scclust"; version="0.1.1"; sha256="1bml4qyyspwaqxzwjhqy8i450614p3f3dj0s0qdkv6psa60h0w5z"; depends=[distances]; }; + scclust = derive2 { name="scclust"; version="0.2.0"; sha256="11jnjij62vcnvbd9m27xjdmyjib35isviqb07435yas93bn01vz4"; depends=[distances]; }; scdensity = derive2 { name="scdensity"; version="1.0.2"; sha256="173xm3bf8vxl30zk4n451al7m003byg9q4d1l1pfyfa4xnv8qdg9"; depends=[lpSolve quadprog]; }; scdhlm = derive2 { name="scdhlm"; version="0.3.1"; sha256="1b5x4kqvmkpb8wbgfhnwqakisw6hfnvama2bsnd8kvw4alfanxhm"; depends=[nlme]; }; scenario = derive2 { name="scenario"; version="1.0"; sha256="0v1b00kiny21yx4qkk2x51cy1zqibdnd68z76qia7h5py28yhxsi"; depends=[]; }; @@ -11001,13 +11492,14 @@ in with self; { sciplot = derive2 { name="sciplot"; version="1.1-1"; sha256="1ydwx9kh778z3x7s3i6gqinqi6bmsf6bslaf0mgszj0nrgcmj6y3"; depends=[]; }; sclero = derive2 { name="sclero"; version="0.2"; sha256="1vqysby822s958msnwcqmz78193vrgmpf6si1jnfb9cj90hh7wgg"; depends=[plyr RImageJROI spatstat]; }; scmamp = derive2 { name="scmamp"; version="0.2.55"; sha256="17qhj9l1akxachaimy9d5rls8adph8aalj3qr6ckip29a8ma9gf7"; depends=[ggplot2 graph reshape2 Rgraphviz]; }; + scoper = derive2 { name="scoper"; version="0.1.0"; sha256="1a170x1h2wglsmqp0fjga2q29yfnfdbgjcm62412n575j9d4xp5n"; depends=[alakazam doParallel dplyr foreach ggplot2 iterators lazyeval shazam stringi]; }; scopr = derive2 { name="scopr"; version="0.3.2"; sha256="0wssxfhkgpqzw5gbqbidawj7wizwcbra8inrxvnmsjxq0fhhzazy"; depends=[behavr data_table memoise readr RSQLite stringr]; }; score = derive2 { name="score"; version="1.0.2"; sha256="1p289k1vmc7qg70rv15x05dyb92r7s6315whr1ibi40sqln62a5s"; depends=[msm]; }; - scorecard = derive2 { name="scorecard"; version="0.1.8"; sha256="04zjlpchdbbm40n12am5094ha36bdiycbq5vzbh0vc3kmc6xhjp1"; depends=[data_table doParallel foreach ggplot2 gridExtra]; }; + scorecard = derive2 { name="scorecard"; version="0.1.9"; sha256="1786j57kg6v8yl88p5zhyi3g7vp5j4j8bci7bill134x9z63nacq"; depends=[data_table doParallel foreach ggplot2 gridExtra]; }; scorecardModelUtils = derive2 { name="scorecardModelUtils"; version="0.0.0.9"; sha256="1hnz9dgx5fxbhh54psalrr50n22vc250v2xxxl49j09q26xh37kl"; depends=[car e1071 gbm ggplot2 partykit randomForest reshape2 sqldf stringr]; }; scorer = derive2 { name="scorer"; version="0.2.0"; sha256="1mc4hxcrqzh4dmz5fy40740bnrp4fxia81fj3cdw9382p67ivhim"; depends=[Rcpp]; }; scoring = derive2 { name="scoring"; version="0.6"; sha256="114jlpbnm15fdan5lr40adxdzwajy3yhdw6dm4kvkvky6qhcx7q5"; depends=[]; }; - scoringRules = derive2 { name="scoringRules"; version="0.9.4"; sha256="0m8050qqb3j0miwfbadp6lmd2q5vicsqn4waw4jszz52fhb8mv27"; depends=[MASS Rcpp RcppArmadillo]; }; + scoringRules = derive2 { name="scoringRules"; version="0.9.5"; sha256="0aby9il4jd6ky8py0qk651al8c0ffqnmfnnzphy6pvndc0q0m085"; depends=[knitr MASS Rcpp RcppArmadillo]; }; scout = derive2 { name="scout"; version="1.0.4"; sha256="0vr497g7g1xhf75cwjbjsns2fvdzy86iibbf5w0g2xylw82s4lh2"; depends=[glasso]; }; scpm = derive2 { name="scpm"; version="1.0-2"; sha256="0jrr90lcalchfqmq5c8ja7ws88rpri3gjdc5z4jfpazn2vznx26n"; depends=[geoR interp lattice MASS Matrix mvtnorm RandomFields rgl]; }; scraEP = derive2 { name="scraEP"; version="1.1"; sha256="0dimvdjlgaymjmd3gf60hxcavpr58bpffrfhlksnrfzbb7an65dd"; depends=[data_table RCurl XML]; }; @@ -11015,42 +11507,43 @@ in with self; { scrime = derive2 { name="scrime"; version="1.3.3"; sha256="1vp7ai10m0f3s0hywyqh0yllxj6z6p795zqpr6vp58fh6yq20x73"; depends=[]; }; scriptName = derive2 { name="scriptName"; version="1.0.0"; sha256="0jpr9x5hf45cik5zxqw0j3vkvbk04a7ck2crvb2472hrv7s9al55"; depends=[purrr rlang]; }; scriptests = derive2 { name="scriptests"; version="1.0-16"; sha256="11l145gvzkxqwbzw976rq94krly1p4lahqw051dwaacarq4hnrdg"; depends=[]; }; - scriptexec = derive2 { name="scriptexec"; version="0.2.1"; sha256="09gaccqadb51ia66xk9vi3p9472s82bg6v8i6ba390g04yipbipi"; depends=[]; }; + scriptexec = derive2 { name="scriptexec"; version="0.2.3"; sha256="0smpn7d1lqyq5x8l5rdhybzv0sqrps0czv1r8bni67i80zjaaff8"; depends=[]; }; scrm = derive2 { name="scrm"; version="1.7.2-4"; sha256="1fj0204hc0yvahg3plz3ia9kwa93mimk721mf2dljwdnj46lb067"; depends=[Rcpp]; }; scrubr = derive2 { name="scrubr"; version="0.1.1"; sha256="0dqsk6vvc79qmjcr1gdksqzbd064nkyqfj2mxg6z7aifqgxs8zzz"; depends=[lazyeval magrittr Matrix qlcMatrix]; }; scs = derive2 { name="scs"; version="1.1-1"; sha256="1qx8b73g5v7mjx85lx5bln6j6i9r7m238i7hm8adr2jrbl33532y"; depends=[Matrix]; }; scuba = derive2 { name="scuba"; version="1.9-1"; sha256="1b92b6p9dn54rmcaw2ng41pvvvkmrzgg12d6zcr3yh8qgi89pvdi"; depends=[]; }; - sdPrior = derive2 { name="sdPrior"; version="0.5"; sha256="1l086a4ghx36fi951z968mpqdjpd64ilqvim6hcm05pl8dj7xcva"; depends=[BayesX caTools doParallel GB2 MASS mgcv mvtnorm pscl rsvd]; }; + sdPrior = derive2 { name="sdPrior"; version="1.0-0"; sha256="0g4crlasnvxz752n3az5jc681jvvj2g87c3a8s2h1i2vh64p5h37"; depends=[doParallel GB2 MASS mgcv mvtnorm pscl]; }; + sdStaf = derive2 { name="sdStaf"; version="1.0.0"; sha256="0yd6nh2kdg81j4hdwbjjmd7ah4jl0p5vm15jq9v3mkw6rrjdz9bi"; depends=[dismo dplyr ggplot2 raster rasterVis rgdal rgeos sp tidyr]; }; sda = derive2 { name="sda"; version="1.3.7"; sha256="1v0kp6pnjhazr8brz1k9lypchz8k8gdaby8sqpqzjsj8klghlcjp"; depends=[corpcor entropy fdrtool]; }; sdat = derive2 { name="sdat"; version="1.1"; sha256="1mxijw2yfblqjvqqb2xrzhfn9c872i1q9ggw24xicvr2fk4lvjw6"; depends=[]; }; sdcMicro = derive2 { name="sdcMicro"; version="5.3.0"; sha256="0n2pbwm344iw3zm0nf6ybx51hf79jhjzd2780c57n71jl2ybxzpk"; depends=[car carData cluster data_table DT e1071 ggplot2 haven knitr MASS prettydoc Rcpp rhandsontable rmarkdown robustbase sets shiny shinyBS VIM xtable]; }; - sdcTable = derive2 { name="sdcTable"; version="0.23"; sha256="00zh55zpi6y5mrhyzxj1r9f2r1axikgy0dimxv7978sasxsm3hnm"; depends=[data_table data_tree knitr lpSolveAPI Rcpp Rglpk rlang slam stringr]; }; + sdcTable = derive2 { name="sdcTable"; version="0.24"; sha256="10qwfa64fji7l24znrhl15ich2bmsq2y219y0pbr6q4xy02vp515"; depends=[data_table data_tree knitr lpSolveAPI Rcpp Rglpk rlang slam stringr]; }; sdcTarget = derive2 { name="sdcTarget"; version="0.9-11"; sha256="18cf276mh1sv16xn0dn8par4zg8k7y8710byxiih6db4i616fjpi"; depends=[doParallel foreach magic tuple]; }; sddpack = derive2 { name="sddpack"; version="0.9"; sha256="1963l8jbfwrqhqcpif73di9i5mb996r4f8smjyil6l7sdir7cg9l"; depends=[]; }; sde = derive2 { name="sde"; version="2.0.15"; sha256="0gxyhq9lafd62y68h7fd746a3jz3jdsm0shgwm2ylmp4a2f5cdmm"; depends=[fda MASS zoo]; }; sdef = derive2 { name="sdef"; version="1.7"; sha256="0x2b8shp02ik0dd11wi3jcrl9h9m963fnkfy47fwwhav9x6jg0jf"; depends=[]; }; sdm = derive2 { name="sdm"; version="1.0-46"; sha256="14z8336yxja1j7mx8xszqqi6s24nk6r5bycmw8h01wvq4rqgxi4g"; depends=[raster sp]; }; - sdmpredictors = derive2 { name="sdmpredictors"; version="0.2.6"; sha256="1kbgv5x5ilzccafl20x86fi9f7jqxnccvb8k7dy8q41s9n36qwfs"; depends=[R_utils raster rgdal]; }; + sdmpredictors = derive2 { name="sdmpredictors"; version="0.2.8"; sha256="18374f2bnhh3nb62xf1h6fbqgpimlnkc2vbx5xkg5gyfylydz0v9"; depends=[R_utils raster rgdal]; }; sdmvspecies = derive2 { name="sdmvspecies"; version="0.3.2"; sha256="19avkag13ij1k65vqhmvcy8j50j8vrgw4mjc49x8i63w3d4z1wxh"; depends=[psych raster]; }; sdnet = derive2 { name="sdnet"; version="2.3.8"; sha256="10c962wbzgl2zpz7yx5kpryldbbq76qrd5pnz4rlmbaa9kfg08s5"; depends=[]; }; sdols = derive2 { name="sdols"; version="1.6"; sha256="083yvlqgr5151dy0570jkhns12nyj2na2gk39vf8gv0gyw72c3yk"; depends=[commonsMath rscala]; }; sdprisk = derive2 { name="sdprisk"; version="1.1-5"; sha256="1c6mipq8sh8347i7m7dh47f69fr21xkrsk8yjgsdvcy41h8zijmf"; depends=[numDeriv PolynomF rootSolve]; }; - sdpt3r = derive2 { name="sdpt3r"; version="0.1"; sha256="06mw1h6c8gkhi3vhal17h7px3bb277xz15k2ryqjwc7agzwhmv8c"; depends=[Matrix]; }; + sdpt3r = derive2 { name="sdpt3r"; version="0.2"; sha256="0q97gxmf2vka566dm6jry5q2scqnm88fq0v5kqkphihsi52kya23"; depends=[Matrix]; }; sdtoolkit = derive2 { name="sdtoolkit"; version="2.33-1"; sha256="0pirgzcn8b87hjb35bmg082qp14idc5pfvm6dikpgkswag23hwh8"; depends=[]; }; sdwd = derive2 { name="sdwd"; version="1.0.2"; sha256="0l0w4jn2p9b7acp8gmlv4w8n662l397kbrm4glslik0vnmjv151w"; depends=[Matrix]; }; seaaroundus = derive2 { name="seaaroundus"; version="1.2.0"; sha256="09nyypzylb0y04ssd9ak2cw8wpy6a3nmabg9p7jrc8qz54wl6z4q"; depends=[crul ggplot2 jsonlite maps rgdal scales sp wicket]; }; - seacarb = derive2 { name="seacarb"; version="3.2.8"; sha256="02l10jgjw79vf31c8qfzfpyrfhlc0j2dibs4pkk5y7visggzr47p"; depends=[gsw oce]; }; + seacarb = derive2 { name="seacarb"; version="3.2.10"; sha256="0l3df69744bsibml6lq3a8cbx846095vgv0icnmrp6rz07x74g7p"; depends=[gsw oce]; }; sealasso = derive2 { name="sealasso"; version="0.1-2"; sha256="0cjy3fj170p5wa41c2hwscmhqxwkjq22vhg9kbajnq7df2s20jcp"; depends=[lars]; }; sealr = derive2 { name="sealr"; version="0.1.1"; sha256="1y31k4y3v1mvjagsbr4647hdn8rk4nfdyixidl3myq0qhnaf0x6w"; depends=[clipr clisymbols digest dplyr glue magrittr purrr rlang rstudioapi styler tibble tidyr]; }; searchConsoleR = derive2 { name="searchConsoleR"; version="0.3.0"; sha256="1z8bdlxq2sk8bcg164wy0yrmsx0inf0aj5ya2pybvadss8wr0qlr"; depends=[googleAuthR stringr]; }; searchable = derive2 { name="searchable"; version="0.3.3.1"; sha256="0xc87i2q42j7dviv9nj4hkgjvpfiprkkjpgzwsy47vp7q8024dv0"; depends=[magrittr stringi]; }; searcher = derive2 { name="searcher"; version="0.0.3"; sha256="004k757hn5y80k7kim3049n3mjrsimqpzdz5fis2ggxbdwwf1bs1"; depends=[]; }; seas = derive2 { name="seas"; version="0.5-2"; sha256="0hn4d5dc01zyycd7l3vj1sx6bq668n7fzffw9ypaa5l20fizs0ay"; depends=[MASS]; }; - season = derive2 { name="season"; version="0.3.6"; sha256="1q0xih4vj0pv1xcgdi2d6vl56gd1gmzfbyc0aklpjz9iaxmxgb8f"; depends=[coda ggplot2 MASS mgcv survival]; }; + season = derive2 { name="season"; version="0.3.8"; sha256="0kw3gvy7rv0rms0zj1rvqlfdn3yxr9r9ldm21zl2xrpx9cy04d2d"; depends=[ggplot2 MASS survival]; }; seasonal = derive2 { name="seasonal"; version="1.6.1"; sha256="1nvavn84f2zb0f6n352br52wcrcmnxv6vprzcpymrnzik7pyp8y6"; depends=[x13binary]; }; seasonalview = derive2 { name="seasonalview"; version="0.3"; sha256="1l705yc7ssldsfckbgnvd95sh3zzhpkmf1rr6ar2s60s3wsyly4n"; depends=[dygraphs htmlwidgets openxlsx seasonal shiny shinydashboard xtable xts zoo]; }; seawaveQ = derive2 { name="seawaveQ"; version="1.0.0"; sha256="19vm1f0qkmkkbnfy1hkqnfz6x2a7g9902ka76bhpcscynl69iy56"; depends=[lubridate NADA survival]; }; - secr = derive2 { name="secr"; version="3.1.6"; sha256="0mf0p7asx2shf630j5xd7ym21f76a0af536wzs9rdbhq0xychv6z"; depends=[abind MASS mgcv nlme raster sp stringr]; }; + secr = derive2 { name="secr"; version="3.1.7"; sha256="0shshkgv89q2w51nmrqx482d8d28xjyrwdnwr6g4061rxms7plsz"; depends=[abind MASS mgcv nlme raster sp stringr]; }; secrdesign = derive2 { name="secrdesign"; version="2.5.4"; sha256="1kbqgdjpyns11ag16rgw9n6mvmjgdypk9lv3yzwf4kynds46wbbk"; depends=[abind secr]; }; secret = derive2 { name="secret"; version="1.0.0"; sha256="09b28f7ndc167bbanbdydralykq718fixnrgs5xr9d3fbdhz1vdl"; depends=[assertthat curl jsonlite openssl rprojroot]; }; secrlinear = derive2 { name="secrlinear"; version="1.1.1"; sha256="0jcvraypkss1gphh4cjb0b4v9460fj4dw80yd057ah11p9942ggs"; depends=[igraph maptools MASS rgdal secr sp]; }; @@ -11060,7 +11553,7 @@ in with self; { seedCCA = derive2 { name="seedCCA"; version="1.0"; sha256="1grs6ykiyp8p5gh93hgb4niggppbh2wzwl6yx0l1qs9fkcz5zvy7"; depends=[CCA corpcor]; }; seedy = derive2 { name="seedy"; version="1.3"; sha256="1a21sl8i7z12cjaqj08lkq3viazxlgxv82vaarm58fgbpsvdi0m0"; depends=[]; }; seewave = derive2 { name="seewave"; version="2.1.0"; sha256="0i0zhvgl64fwpabnwvfdxndmw5whhh2fd4lhpg399w4rzrwzv92y"; depends=[tuneR]; }; - seg = derive2 { name="seg"; version="0.5-1"; sha256="0gsdbq7b5wpknhlilrw771japr63snvx4vpirvzph4fjyby1c7rg"; depends=[sp splancs]; }; + seg = derive2 { name="seg"; version="0.5-5"; sha256="0q1k3zh29pkxx2sq28dw1vn4nmdv7pa8pw48vmywfcm4vmqnx7xg"; depends=[sp splancs]; }; segclust2d = derive2 { name="segclust2d"; version="0.1.0"; sha256="0kymw36cvakx84c96npkbnsvv0a1s82773ib5c802ybvkb2r1k9p"; depends=[dplyr ggplot2 magrittr plyr RColorBrewer Rcpp RcppArmadillo reshape2 scales zoo]; }; segmag = derive2 { name="segmag"; version="1.2.4"; sha256="1i717xg1z7s35pkwzywgjf9wx7zj9xksv0k87h7p1q62y073qbqm"; depends=[plyr Rcpp]; }; segmented = derive2 { name="segmented"; version="0.5-3.0"; sha256="0nrik5fyq59hwiwjcpbi4p5yfavgfjq6wyrynhkrbm4k6v1g1wlq"; depends=[]; }; @@ -11082,20 +11575,20 @@ in with self; { semPLS = derive2 { name="semPLS"; version="1.0-10"; sha256="0q5linjyv5npkw4grx3vq58iq2q1grf06ikivhkg8w7rvb7pqn6b"; depends=[lattice]; }; semPlot = derive2 { name="semPlot"; version="1.1"; sha256="0fzz580an7mmq6vycxbcvfdqbii0qz0nghlidb6in05j8dppsnsn"; depends=[colorspace corpcor igraph lavaan lisrelToR OpenMx plyr qgraph rockchalk sem semTools XML]; }; semPower = derive2 { name="semPower"; version="1.0.0"; sha256="0wciz5qrd40q4mxq96pibnya11ac42n37c9xhjd4zfhznhjz06bb"; depends=[]; }; - semTools = derive2 { name="semTools"; version="0.5-0"; sha256="0akan511aj8qkn37aiw200nvyxwdqrz022ll16av2n7qsp9xdynh"; depends=[lavaan]; }; + semTools = derive2 { name="semTools"; version="0.5-1"; sha256="0lh10yw888hcj1mdl96p5pw8gi0a1dj8panclghry6b8xaa3w7ni"; depends=[lavaan]; }; semantic_dashboard = derive2 { name="semantic.dashboard"; version="0.1.1"; sha256="0fd5qnw5jcmf5akkv59z1zjizsczwlmnpkfd8bfminhpa89sgp1y"; depends=[shiny shiny_semantic]; }; semdiag = derive2 { name="semdiag"; version="0.1.2"; sha256="0kjcflw7dn907zx6790w7hnf5db6bf549whfsc0c2r173kf13irp"; depends=[sem]; }; - semds = derive2 { name="semds"; version="0.9-4"; sha256="14x6xqv15fgsxhsyxw77i3slpdaax8kcq9sx7ipwp1b83fmmqv1z"; depends=[minpack_lm pracma]; }; + semds = derive2 { name="semds"; version="0.9-5"; sha256="16zla94jzqrm2gji4sgiz44fw15f2kf4i8s76s1cnjai6saqcf9f"; depends=[minpack_lm pracma]; }; semiArtificial = derive2 { name="semiArtificial"; version="2.2.5"; sha256="1m8kwjhqjpqjzz22caiwpb4nb70d8y0ssf9j4rfyyh530x2q2k1m"; depends=[cluster CORElearn flexclust fpc ks logspline MASS mcclust nnet robustbase RSNNS StatMatch timeDate]; }; - seminr = derive2 { name="seminr"; version="0.5.0"; sha256="0f8k1v2g82axhaw5a370f95h9q07qar1by795wfc3yil7pn94xmy"; depends=[]; }; + seminr = derive2 { name="seminr"; version="0.5.3"; sha256="18yd2pcp4msy6w4gpj5znid4gygh1hg2794lhsjqxvyz36hb3i5p"; depends=[]; }; semsfa = derive2 { name="semsfa"; version="1.1"; sha256="1k6i1m4r9y7j85rlrsgfjm8w15ax4xgf70xyvqwsszmf9950ldxx"; depends=[doParallel foreach gamlss iterators mgcv moments np]; }; semtree = derive2 { name="semtree"; version="0.9.12"; sha256="07i82f3bnn9x7gy8gsjyd99mzcq9pk3xqb3479d338vpky2afv43"; depends=[bitops cluster digest OpenMx plotrix rpart rpart_plot sets]; }; semver = derive2 { name="semver"; version="0.2.0"; sha256="10wpkyms2cix3bsin2q0qhkbl445pwwpa5gm2s4jjw1989namkxy"; depends=[assertthat Rcpp]; }; sendmailR = derive2 { name="sendmailR"; version="1.2-1"; sha256="0z7ipywnzgkhfvl4zb2fjwl1xq7b5wib296vn9c9qgbndj6b1zh4"; depends=[base64enc]; }; sendplot = derive2 { name="sendplot"; version="4.0.0"; sha256="0ia2xck94nwirwxi38nv0viz5wb8291yiak6f0wgwh84irsrfp1h"; depends=[rtiff]; }; sensR = derive2 { name="sensR"; version="1.5-1"; sha256="0hqnk6gvlkl9harz7rh5ikbp0s0vjwi63gxixqjfhkyk02ilaa3z"; depends=[MASS multcomp numDeriv]; }; - sensiPhy = derive2 { name="sensiPhy"; version="0.8.2"; sha256="19sbcl3873r2jayxpr83n8w36br12c6p31y830gzi7a4q0cxaxxq"; depends=[ape caper geiger ggplot2 phylolm phytools]; }; - sensitivity = derive2 { name="sensitivity"; version="1.15.0"; sha256="02vqs1pqzivxpg2ql3wi0530cshdkz7hxvablpd1dzhvjnindknm"; depends=[boot]; }; + sensiPhy = derive2 { name="sensiPhy"; version="0.8.3"; sha256="03qrxal0wvgiyr5vnnzc8n95h4460p11idnmr6vnr73c5f8q905h"; depends=[ape caper geiger ggplot2 phylolm phytools]; }; + sensitivity = derive2 { name="sensitivity"; version="1.15.2"; sha256="0ilb79bbplnv5qlismp21jrzfxr1is59vww3s1p99ax303614w7m"; depends=[boot]; }; sensitivity2x2xk = derive2 { name="sensitivity2x2xk"; version="1.01"; sha256="1r829k939zzmi0j4chdaniajchcflmmjrl3a9hwnkg0wkfnjbvdl"; depends=[BiasedUrn mvtnorm]; }; sensitivityPStrat = derive2 { name="sensitivityPStrat"; version="1.0-6"; sha256="0rfzvkpz7dll3173gll6np65dyb40zms63fkvaiwn0lk4aryinlh"; depends=[survival]; }; sensitivityfull = derive2 { name="sensitivityfull"; version="1.5.6"; sha256="0g2gc4rms6gd34d23kxj50pjh0yq1h6yiybj4dxwyf6i2652irhq"; depends=[]; }; @@ -11105,10 +11598,10 @@ in with self; { sensors4plumes = derive2 { name="sensors4plumes"; version="0.9.3"; sha256="1r9sddnlxpjck7rhm2w7z8jak7wmrxg3d62dydc5dqcqhgp54r6p"; depends=[automap conf_design emdist FNN genalg gstat lattice raster rgdal sp]; }; sensory = derive2 { name="sensory"; version="1.1"; sha256="1zd0ajrymxi6gygcq9fqgwgy0g6c3cqz53x0k5m0ihbmh11rc7s7"; depends=[gtools MASS Matrix]; }; senstrat = derive2 { name="senstrat"; version="1.0.3"; sha256="0j6mb55v5ivqvk8nn8fjlzrbdgj6csa58yc6gy1g07m7gk2qz2np"; depends=[BiasedUrn MASS]; }; - sentimentr = derive2 { name="sentimentr"; version="2.3.2"; sha256="14f5zac5ywz864fbcia05kdlxx4bgvasc1l1abcrk34i2jvh8zwl"; depends=[data_table ggplot2 lexicon stringi syuzhet textclean textshape]; }; - sentometrics = derive2 { name="sentometrics"; version="0.4"; sha256="0mr064qb1wr0bpbrx1bl3imxy95ybxlx4bxpy25qcz07v5nynk5l"; depends=[abind caret data_table doParallel foreach ggplot2 ggthemes glmnet ISOweek MCS quanteda Rcpp RcppArmadillo RcppRoll stringi zoo]; }; + sentimentr = derive2 { name="sentimentr"; version="2.6.1"; sha256="1xwi3rjyhx3w042r2g4a8rzqr2svam7fdx2ivc9vyhj9y81az7fh"; depends=[data_table ggplot2 lexicon stringi syuzhet textclean textshape]; }; + sentometrics = derive2 { name="sentometrics"; version="0.5.1"; sha256="1icnf7p45hgh2z02xmxc5a7bx9k5r0jjs3mnpr1j97vnm19rk8jx"; depends=[abind caret data_table foreach ggplot2 glmnet ISOweek quanteda Rcpp RcppArmadillo RcppParallel RcppRoll stringi zoo]; }; separationplot = derive2 { name="separationplot"; version="1.1"; sha256="0qfkrk8n6jj8l7ywngwsaikfwmd9hbrpr43x0l9wkjjp1asgs5l6"; depends=[]; }; - seplyr = derive2 { name="seplyr"; version="0.5.8"; sha256="0ca9mg2fx3jdgybbiq2a22q5p6613awxwysrpgdbs5lrqdm1ywim"; depends=[dplyr rlang tidyr wrapr]; }; + seplyr = derive2 { name="seplyr"; version="0.8.2"; sha256="0inqnrqf2dld2dkhwp16iz8hzrvi01jbj437ghhvprfp06320lxg"; depends=[dplyr rlang tidyr wrapr]; }; seqCBS = derive2 { name="seqCBS"; version="1.2"; sha256="1kywi3kvvl9y6nm7cwf6fj8gz9gzznp5va336g1akzgy77k82d8v"; depends=[clue]; }; seqDesign = derive2 { name="seqDesign"; version="1.1"; sha256="1694swd8ik9fbiflmnw4xpq82kq18rqzkw0dv5pvq30c47xjgamv"; depends=[survival xtable]; }; seqHMM = derive2 { name="seqHMM"; version="1.0.8-1"; sha256="18rpmncm5xn34l336kzg0pby59pw16s5cdv3h946yhrcjigz0kkn"; depends=[gridBase igraph Matrix nloptr numDeriv Rcpp RcppArmadillo TraMineR]; }; @@ -11116,86 +11609,90 @@ in with self; { seqMeta = derive2 { name="seqMeta"; version="1.6.7"; sha256="11dscdrlnk5jzg0q2g59qis4xjr4xs86bi463jmhq53n9gsb4i1l"; depends=[CompQuadForm coxme Matrix survival]; }; seqRFLP = derive2 { name="seqRFLP"; version="1.0.1"; sha256="1i98hm8wgwr8b6hd237y2i9i0xgn35w4n2rxy4lqc5zq71gkwkvk"; depends=[]; }; seqinr = derive2 { name="seqinr"; version="3.4-5"; sha256="17zv0n5cji17izwmwg0jcbxbjl3w5rls91w15svcnlpxjms38ahn"; depends=[ade4 segmented]; }; - seqminer = derive2 { name="seqminer"; version="6.0"; sha256="057j1l6dip35l1aivilapl2zv9db677b3di2pb3sfgq2sxg0ps3l"; depends=[]; }; + seqminer = derive2 { name="seqminer"; version="6.1"; sha256="15yhg4vfc7jg1jnqb3371j00pgbmbyc9l1xx63hq1l3p34lazq2l"; depends=[]; }; seqmon = derive2 { name="seqmon"; version="2.1"; sha256="0p7vbrx0l59wyxhg59a8nnnk1z46inys30rpchj0v5ggadaazjkx"; depends=[]; }; seqtest = derive2 { name="seqtest"; version="0.1-0"; sha256="1bdfww9szh7h278id5xpfc39mxkcix3yvsdwc68wx3q3x0wxhqhq"; depends=[]; }; sequences = derive2 { name="sequences"; version="0.5.9"; sha256="17571m525b6a3k4f0m936wfq401181gx1fpb7x4v0fhaldzdmk3a"; depends=[Rcpp]; }; sequenza = derive2 { name="sequenza"; version="2.1.2"; sha256="0f3aj96qvbr1wqimlv6rxg0v34zlrgc6pbdy7sfkwfzs1n44q1xf"; depends=[copynumber squash]; }; - sequoia = derive2 { name="sequoia"; version="1.0.2"; sha256="1pn282s40ssprjrfh5drjr123ldlp84z3kviv6mmavrwhkp5lq5g"; depends=[plyr]; }; + sequoia = derive2 { name="sequoia"; version="1.1.1"; sha256="12s6890jr9rvp45h1hrfwpndsrr7na0kz1a29hd96ycnk7bvd1ic"; depends=[plyr]; }; sergeant = derive2 { name="sergeant"; version="0.5.2"; sha256="02chkyvmwd4nimw62v82rfbid1xqw5b1335na44pdi675g904250"; depends=[DBI dbplyr dplyr htmltools httr jsonlite purrr readr scales]; }; serial = derive2 { name="serial"; version="1.3"; sha256="1ibwd8xmkd0pwdhivm6h3yd3rsi28mai5n7qcs1bq2mx8hb5lg7f"; depends=[]; }; seriation = derive2 { name="seriation"; version="1.2-3"; sha256="1q6hw4hjw224b4y0dc0j630v2pgj6sn455nwkilb70w8k31hpk92"; depends=[cluster colorspace dendextend gclus gplots MASS qap registry TSP]; }; - serieslcb = derive2 { name="serieslcb"; version="0.1.0"; sha256="09mg8x738q7p16z95rrfj9fzmsrl34fvx9nsz1ndkp4h6cwf679l"; depends=[gplots shiny]; }; + serieslcb = derive2 { name="serieslcb"; version="0.2.0"; sha256="1af7mvfiv40hwjlf6f53grw48c343rnmzxiyw4yx95mf8rk46bsd"; depends=[gplots shiny]; }; seroincidence = derive2 { name="seroincidence"; version="2.0.0"; sha256="0sam4y7w6prswz0izkm1a9v2k5rv7z22g1ajy15n9xix9aml5ms4"; depends=[]; }; serrsBayes = derive2 { name="serrsBayes"; version="0.3-13"; sha256="1s38mva66l684i0wrk65r3gdafjlih7bglsmi9fr44yk0wavygrm"; depends=[MASS Matrix Rcpp RcppEigen truncnorm]; }; - servr = derive2 { name="servr"; version="0.10"; sha256="0yz3igqsiyqnjj1ngh199zicg3spx4kbmvl0wc8i8xahk6l9g06v"; depends=[httpuv jsonlite mime xfun]; }; + servr = derive2 { name="servr"; version="0.11"; sha256="0yj3p1risf269n25dd56lqv82dsxv6a0aq4bcc1ddn9wv7h2xdfi"; depends=[httpuv jsonlite mime xfun]; }; sesem = derive2 { name="sesem"; version="1.0.2"; sha256="0b1xzv38wpkhhlq87xrvlh45b8ksbi8bg4ar5hrf8gxa19r9rmi5"; depends=[gplots lavaan mgcv]; }; session = derive2 { name="session"; version="1.0.3"; sha256="04mcy1ac75fd33bg70c47nxqxrmqh665m9r8b1zsz5jij1sbl8q5"; depends=[]; }; - sessioninfo = derive2 { name="sessioninfo"; version="1.0.0"; sha256="00g3lbvk1cjjzckl70fn5n3579qb301im4lbm3cip5c2v8k283dk"; depends=[clisymbols withr]; }; + sessioninfo = derive2 { name="sessioninfo"; version="1.1.0"; sha256="01c0m8yzadpwd825hky6as0f8ka4xyz7zfy0ih2iy7qqw11w6qn5"; depends=[cli withr]; }; setRNG = derive2 { name="setRNG"; version="2013.9-1"; sha256="02198cikj769yc32v8m2qrv5c01l2fxmx61l77m5ysm0hab3j6hs"; depends=[]; }; sets = derive2 { name="sets"; version="1.0-18"; sha256="16v7650p47khqrbbw0z98llmwmmhswqmhri0n7nrfhdqwmby1lbl"; depends=[]; }; setter = derive2 { name="setter"; version="0.0-1"; sha256="10fwrx8yysp99rrkbnn3rbz79vyzr2h3p7zxxlqapw1k2lllp0r5"; depends=[assertive_base]; }; settings = derive2 { name="settings"; version="0.2.4"; sha256="092sv6nccm6p2d695l9w0zfi2xgymk12c8p8lhl9nb86mxrb3nry"; depends=[]; }; severity = derive2 { name="severity"; version="2.0"; sha256="1mp19y2pn7nl9m8xfljc515kk5dirv0r2kypazpmd956lcivziqq"; depends=[]; }; - sf = derive2 { name="sf"; version="0.6-3"; sha256="0c6ayyclhlna2jnpwi6glafw7ip7ar0ycsmms79x451mdqb5xvja"; depends=[classInt DBI magrittr Rcpp units]; }; + sf = derive2 { name="sf"; version="0.7-1"; sha256="0xpgv1fyha61s5sa2msgsznl23yi2rpki6jnjv7xg1a26bl0il89"; depends=[classInt DBI magrittr Rcpp units]; }; sfa = derive2 { name="sfa"; version="1.0-1"; sha256="1acqxgydf8j5csdkx0yf169x3yaa31r0ccdrqarh6vj1hacm89ad"; depends=[]; }; sfadv = derive2 { name="sfadv"; version="1.0.1"; sha256="1rfpm6km5pckwhqgpvidm6qsj5sjdaqqj5b0sgvpslivfa4c80cr"; depends=[gmm minpack_lm]; }; sfc = derive2 { name="sfc"; version="0.1.0"; sha256="0cm4mfcfd9bhf2j5fppsihzrfipnldb6q3xradd88z9pwgrkfx2a"; depends=[dplyr sna tidyr triangle zoo]; }; sfdct = derive2 { name="sfdct"; version="0.0.6"; sha256="0ilh89mfwp1yqn44yn80vz1a6g65hryk6w87ngzvak3pd6jxq6aa"; depends=[dplyr RTriangle sf sp tibble]; }; sfinx = derive2 { name="sfinx"; version="1.7.99"; sha256="14v47y00qwvc2s0vzjw19hwn85nzj8lna539c75qq6zkn6kir6va"; depends=[]; }; sfsmisc = derive2 { name="sfsmisc"; version="1.1-2"; sha256="0cgq2h11ngkzd6p34k6mqjnvlvc5vj4lnqrl64k05lb391j391w0"; depends=[]; }; - sft = derive2 { name="sft"; version="2.2-0"; sha256="0d1yiimc899i09yyrv1x40ixqss87xjpy08ab16h9faxd4bsk3y2"; depends=[fda SuppDists]; }; + sft = derive2 { name="sft"; version="2.2-1"; sha256="0fxz64ba58n6ghfqsgq64n1c7qkvi8c3lsa86732mil9w71yxw33"; depends=[fda SuppDists]; }; sgPLS = derive2 { name="sgPLS"; version="1.7"; sha256="1jk2j1zn5vq82rcjflnk7g6y2q0v5jl14k804dmigqg013gbykql"; depends=[mixOmics mvtnorm]; }; sgRSEA = derive2 { name="sgRSEA"; version="0.1"; sha256="0vyypnq81l36x0j44q2l9wbf3x4krz4fzypi7vyqhaq97mkzaw5j"; depends=[]; }; sgee = derive2 { name="sgee"; version="0.6-0"; sha256="055iydainzywb1s5id5rl9i94dj5arr9b6qz15p8wps49vm2mlp3"; depends=[copula mvtnorm]; }; sgeostat = derive2 { name="sgeostat"; version="1.0-27"; sha256="1iq9p2jk8bpv1h853a1l91d5c5dxnhkk3cmkd01siqqvj04hv4vb"; depends=[]; }; + sglOptim = derive2 { name="sglOptim"; version="1.3.7"; sha256="19rwich72xzdlwkp6cpqdjxa6hcfd4ys1ia66gzpvkyqs05m3561"; depends=[BH doParallel foreach Matrix Rcpp RcppArmadillo RcppProgress]; }; sglasso = derive2 { name="sglasso"; version="1.2.3"; sha256="1xf4jni7gybk66wp542p92jxrp4lf63ypbwsnb3av5db04bis7ll"; depends=[igraph Matrix]; }; sglg = derive2 { name="sglg"; version="0.1.3"; sha256="17w9mfb53ll8aqasl4ysnb0b7sk6cgp7s1cfvn07rg5win2swqrj"; depends=[Formula robustloggamma ssym survival]; }; sglr = derive2 { name="sglr"; version="0.7"; sha256="11gjbvq51xq7xbmpziyzwqfzf4avyxj2wpiz0kp4vfdj3v7p4fp9"; depends=[ggplot2 shiny]; }; - sgmcmc = derive2 { name="sgmcmc"; version="0.2.2"; sha256="1ga3dynhldkl98fd7fzbbhb4bryf6nyijwvxsj8i1szy4jsv8q3q"; depends=[tensorflow]; }; + sgmcmc = derive2 { name="sgmcmc"; version="0.2.3"; sha256="08n2m1aksa5frasmc4xa7c9b444icnzj0ycixvnq3d13v803ham4"; depends=[reticulate tensorflow]; }; + sgmodel = derive2 { name="sgmodel"; version="0.1.0"; sha256="03s9z7n7w3pys5dp1z5x91bszgv3q1sax5z591dz9rvmn5glp2lj"; depends=[ggplot2 ramify Rtauchen tidyverse]; }; sgof = derive2 { name="sgof"; version="2.3"; sha256="12bpyvg5df1m2ar6frpi10zlj3dk9h61r13rzn3w5a3nyk8gljsg"; depends=[poibin]; }; sgr = derive2 { name="sgr"; version="1.3"; sha256="0zxmrbv3fyb686hcgfy2w1w2jffxf41ab8yc90dsgf931s9c55wn"; depends=[MASS]; }; sgt = derive2 { name="sgt"; version="2.0"; sha256="0qb3maj5idwafs40fpdfrwzkadnh5yg8fvfzfs51p9yy69kbmlkx"; depends=[numDeriv optimx]; }; shades = derive2 { name="shades"; version="1.2.0"; sha256="06mz09rrrjp4dkzbw6nnv6n3k80ddwzaw4pkp4127d1f4cij9pnj"; depends=[]; }; - shadow = derive2 { name="shadow"; version="0.5.3"; sha256="036jh63y3i42yfjm96yp0xp3p77v1mzj77q0vl9msjhd246l5gm8"; depends=[plyr raster rgeos sp]; }; - shadowtext = derive2 { name="shadowtext"; version="0.0.2"; sha256="17ccylxnl6837cf81fwkgywjmqizmcm6mhqak10sl5apnqm5n1nl"; depends=[ggplot2]; }; + shadow = derive2 { name="shadow"; version="0.5.7"; sha256="11x3vrkar0cf0x8dgsylhk4j53mcpw1vcja0wfxa08y9rcbjlb5b"; depends=[plyr raster rgeos sp]; }; + shadowtext = derive2 { name="shadowtext"; version="0.0.3"; sha256="1mqi7n6m9mm86z3gv6cf37qbq8p4n0lqlzs9d7x873a27bpclca0"; depends=[ggplot2]; }; shallot = derive2 { name="shallot"; version="0.4.4"; sha256="0bjbw8l5lzz5d6nxgwjby40fxvxrfli0wkipdf84pg4nigy84w2w"; depends=[commonsMath rscala sdols]; }; shape = derive2 { name="shape"; version="1.4.4"; sha256="0hadk3mapkhbh8xjkiz52vxdagmmgvm15xwpzb90ikw4giyipjzl"; depends=[]; }; shapeR = derive2 { name="shapeR"; version="0.1-5"; sha256="17fq4gsdvyniq7n4x1xdvb5kk50184i7why3pdf1djjhknym087j"; depends=[gplots jpeg MASS pixmap vegan wavethresh]; }; shapefiles = derive2 { name="shapefiles"; version="0.7"; sha256="08ghndihs45kylbzd9wnxffn8ixvxjhjnjldjyd526ai2sj8xcgf"; depends=[foreign]; }; - shapes = derive2 { name="shapes"; version="1.2.3"; sha256="1fzwpqa0paql4n652diqsqylz5r5crblfip6g6c0vszrvy7avi4q"; depends=[MASS rgl scatterplot3d]; }; + shapes = derive2 { name="shapes"; version="1.2.4"; sha256="1zqykhx8rz1k2ahi2lmmzll1c8k0as6vw4gbd3rpfb5fvpni3ni0"; depends=[MASS minpack_lm rgl scatterplot3d]; }; sharpeRratio = derive2 { name="sharpeRratio"; version="1.1"; sha256="0rgsad8idhjyjgwlzk358jlqkqf6sk7g6vl3fchkamjzxnhbb8p9"; depends=[ghyp Rcpp]; }; sharpr2 = derive2 { name="sharpr2"; version="1.1.1.0"; sha256="1r7anfr296l5sbhgry6rb15hlca6mpcm24qssdzz9bckavyfvqgi"; depends=[Matrix mvtnorm]; }; sharpshootR = derive2 { name="sharpshootR"; version="1.0"; sha256="1x9cava7b9lg8qpmjqlbkqmpc9a2dn8k4kl71s4himr4wzp9z4y3"; depends=[ape aqp circular cluster digest Hmisc igraph lattice latticeExtra plyr RColorBrewer reshape2 scales soilDB sp vegan]; }; sharx = derive2 { name="sharx"; version="1.0-5"; sha256="10sfjg6946jfk4051da0w1v89503av40wckqaabr12syf8kn0aw8"; depends=[dclone dcmle Formula]; }; - shazam = derive2 { name="shazam"; version="0.1.9"; sha256="1dm553l1qwqajy5p13x3ms6x45ax33zh7b79iw6xx1chbrpalhmk"; depends=[alakazam ape diptest doParallel dplyr foreach ggplot2 igraph iterators kedd KernSmooth lazyeval MASS progress scales SDMTools seqinr stringi tidyr]; }; + shazam = derive2 { name="shazam"; version="0.1.10"; sha256="1rhd2jh8s548z4p984l0cqn0hgdvnv4mgfbb82k5l4m9p2rsii81"; depends=[alakazam ape diptest doParallel dplyr foreach ggplot2 igraph iterators kedd KernSmooth lazyeval MASS progress scales SDMTools seqinr stringi tidyr]; }; shelltrace = derive2 { name="shelltrace"; version="3.5.1"; sha256="1xgbavaa26185i6q3907ds3bzq4xrw027x1sw5vsybqrxdz04jiz"; depends=[bmp tiff xlsx]; }; shiftR = derive2 { name="shiftR"; version="1.4"; sha256="12mb4b5zhiq7hfkpc9hgi004hqli1kkkzdy2169svwrjv7bfifrn"; depends=[]; }; shiny = derive2 { name="shiny"; version="1.1.0"; sha256="12aw4kmf0j993fj4lpyqlyqzzn0bnniwd55w22p9pa0b3g6n9dbh"; depends=[crayon digest htmltools httpuv jsonlite later mime promises R6 rlang sourcetools xtable]; }; + shiny_i18n = derive2 { name="shiny.i18n"; version="0.1.0"; sha256="15llwr4yrx6rlk32b92wcq3dn360y5cvy4mh2aqkza9ikcvlhcvv"; depends=[jsonlite yaml]; }; + shiny_router = derive2 { name="shiny.router"; version="0.1.1"; sha256="0biwni6bk39qafvsh8w32crlgm4hf8r9kwkmnlc3w5za2x2fja4c"; depends=[magrittr shiny]; }; shiny_semantic = derive2 { name="shiny.semantic"; version="0.2.1"; sha256="0m0f22qlmf7f2cf33myn72dm48yslqyx4kwzb96i78a3yz6a2awp"; depends=[htmltools htmlwidgets jsonlite magrittr purrr shiny]; }; - shinyAce = derive2 { name="shinyAce"; version="0.3.1"; sha256="1hqgszbiv99dibhwr21v21ll4s2hjn3ccqdicsm0z3gk77bh8iyb"; depends=[jsonlite shiny]; }; + shinyAce = derive2 { name="shinyAce"; version="0.3.2"; sha256="1fbk5i6w6cpam8s3acf4bgdp8hajn4digjjix3i6i4q3p2rvn6zx"; depends=[jsonlite shiny]; }; shinyBS = derive2 { name="shinyBS"; version="0.61"; sha256="0rhim4mbp4x9vvm7xkmpl7mhb9qd1gr96cr4dv330v863ra2kgji"; depends=[htmltools shiny]; }; shinyDND = derive2 { name="shinyDND"; version="0.1.0"; sha256="0nkvz4hmjzmxlzj4vkjrdy8xlbxapg1amk180irgvwicqldi4jpm"; depends=[htmltools shiny]; }; - shinyFeedback = derive2 { name="shinyFeedback"; version="0.0.4"; sha256="14lvr99nfldlr101ysmpwz0zw0bjvr6b7lfm0msx57ymh6gjzg3n"; depends=[digest shiny]; }; - shinyFiles = derive2 { name="shinyFiles"; version="0.7.0"; sha256="1bs1dj84scg4gkrdlw1jvmnwckcjcdpzc8drwmr8h6cxk3yklijc"; depends=[htmltools jsonlite shiny]; }; + shinyFeedback = derive2 { name="shinyFeedback"; version="0.1.0"; sha256="01qp75c5dsvc4xs1id1yhn81gmjl0hnjz8msf8mkvf4ifqal563f"; depends=[digest shiny]; }; + shinyFiles = derive2 { name="shinyFiles"; version="0.7.1"; sha256="1cbg09l7w2zbgxb4qjm9p873p0lzrihlzsk5xxi3cpxdckn6zsrm"; depends=[fs htmltools jsonlite shiny tibble]; }; shinyHeatmaply = derive2 { name="shinyHeatmaply"; version="0.1.0"; sha256="1vl80vp7yslnh0dvcrpysfn5rndjavphy31y15546q7ax7d0fn6v"; depends=[dplyr DT heatmaply htmltools htmlwidgets jsonlite plotly RColorBrewer readxl shiny viridis xtable]; }; shinyKGode = derive2 { name="shinyKGode"; version="1.0.5"; sha256="004zwz4kqfijzvvwkq8v1gi25w1wrdlg8230g93w36gbi6cl2vk1"; depends=[ggplot2 gridExtra KGode mvtnorm pracma pspline reshape2 shiny shinyjs XML]; }; shinyLP = derive2 { name="shinyLP"; version="1.1.2"; sha256="1sjcll10ciq6pj9h8c6ybjqp8763wc423hddlalcblxxpajf6avz"; depends=[shiny]; }; shinyRGL = derive2 { name="shinyRGL"; version="0.1.0"; sha256="07llg1yg5vmsp89jk60ly695zvxky6n06ar77mjxzlyc294akwmy"; depends=[rgl shiny]; }; shinyShortcut = derive2 { name="shinyShortcut"; version="0.1.0"; sha256="101wz9s4rk7fbaqgm0r2v3v8za20vdxwq4vhkz8xr7y5pr65sxiq"; depends=[]; }; shinyTime = derive2 { name="shinyTime"; version="0.2.1"; sha256="0gpa6kypchvvlq71nnlilciclcrhaa488prjz46sddrsxjy09mp7"; depends=[htmltools shiny]; }; - shinyTree = derive2 { name="shinyTree"; version="0.2.2"; sha256="08n2s6pppbxn23ijp6vms609p4qwlmfh9g0k5hdfqsqxjrz1nndi"; depends=[shiny]; }; + shinyTree = derive2 { name="shinyTree"; version="0.2.6"; sha256="1rw6nwvjsmzfj5fprvg0fasfq079pmdid6vv6rj11wvy7rf40y6j"; depends=[jsonlite shiny]; }; shinyWidgets = derive2 { name="shinyWidgets"; version="0.4.3"; sha256="070yy6vq9w97bz17nxbc2z65v05k50hr24dxfcld994bw0910ldx"; depends=[htmltools jsonlite shiny]; }; shinyaframe = derive2 { name="shinyaframe"; version="1.0.1"; sha256="1flhgsm4q7p5acb41v73pf8ni92y9dwdppxjb9czlz1sxwf03p1s"; depends=[htmltools htmlwidgets shiny]; }; shinyalert = derive2 { name="shinyalert"; version="1.0"; sha256="0ngmpbzw6fw1gs6sv9m3xv2c9bmrxg0bs6lnvxn8hm8cwr4440xi"; depends=[digest shiny]; }; - shinyanimate = derive2 { name="shinyanimate"; version="0.1.0"; sha256="0vbzfcw4d0fvmpdn2pjbsl3najikhm6p60w5vxc0d3x7d8sfq57z"; depends=[shiny]; }; + shinyanimate = derive2 { name="shinyanimate"; version="0.2.0"; sha256="04knbwv8ls23ibwj0gnnpmvnich9nbakx4pjfawghwlm75z9bpdk"; depends=[shiny]; }; shinybootstrap2 = derive2 { name="shinybootstrap2"; version="0.2.1"; sha256="17634l3swlvgj1sv56nvrpgd6rqv7y7qjq0gygljbrgpwmfj198c"; depends=[htmltools jsonlite shiny]; }; shinycssloaders = derive2 { name="shinycssloaders"; version="0.2.0"; sha256="1bpzsm7m7c366sjl1qndp4m5dg2vlm68rjgdy9n1ija9xbp0r2g4"; depends=[digest glue shiny]; }; shinycustomloader = derive2 { name="shinycustomloader"; version="0.9.0"; sha256="1klx71vr26g0gjf6hbiia1qidqii5d467i1sdjvlrg1hxdcggqff"; depends=[glue shiny]; }; - shinydashboard = derive2 { name="shinydashboard"; version="0.7.0"; sha256="10yqcqqcxgfqwkmscqwvvgr710im583qsqnsqkfpisjvkqp10yqb"; depends=[htmltools shiny]; }; - shinydashboardPlus = derive2 { name="shinydashboardPlus"; version="0.5.0"; sha256="0wj388lys7jlh45il6vvln0bpjg1rr91xyypzz55hp46r8z31vl2"; depends=[htmltools shiny shinydashboard]; }; - shinyhelper = derive2 { name="shinyhelper"; version="0.3.0"; sha256="1ypd9wc0h9yfh4awjmjn952g2cfsgcyrm25zk575b17jrkjl5skj"; depends=[markdown shiny]; }; - shinyjqui = derive2 { name="shinyjqui"; version="0.3.0"; sha256="0x7pyb897apmdfpys2kc7bkaa8i4a9rlmdlmlps1n8cxj8kx3dal"; depends=[htmltools htmlwidgets jsonlite shiny]; }; + shinydashboard = derive2 { name="shinydashboard"; version="0.7.1"; sha256="0khac8b27q3swdw07kl609hm0fjfjsjv591b388q99mqqr2rk92i"; depends=[htmltools promises shiny]; }; + shinydashboardPlus = derive2 { name="shinydashboardPlus"; version="0.6.0"; sha256="01yfijdh6ynxzd45bidywvdk0rlx7fzfzq5pbapbvknb7sbasi0y"; depends=[htmltools shiny shinydashboard]; }; + shinyhelper = derive2 { name="shinyhelper"; version="0.3.1"; sha256="1z3wb3vdpz9pcn6rfmpbxky05cf8bxldhpwzldrmhn03spz3n987"; depends=[markdown shiny]; }; + shinyjqui = derive2 { name="shinyjqui"; version="0.3.2"; sha256="1a73vsq1wc3xf14y64hkgnk5jgxj98b8aj3g0fs7mgayar3an5g0"; depends=[htmltools htmlwidgets jsonlite shiny]; }; shinyjs = derive2 { name="shinyjs"; version="1.0"; sha256="113zpijri0l80rlgrvqn6bxk0sdqgl79h7yhja2p76f9dc9i2sr8"; depends=[digest htmltools jsonlite shiny]; }; shinymaterial = derive2 { name="shinymaterial"; version="0.5.3"; sha256="0lddw626mlb6vv474vv22pbjlwl1hgnjs8py3a30d84m94wg7p3z"; depends=[jsonlite shiny]; }; shinystan = derive2 { name="shinystan"; version="2.5.0"; sha256="18alf5kiqw7y2l6m5nxxizwc2znsf9frxfsqhvgcad8hld9cbya5"; depends=[bayesplot colourpicker DT dygraphs ggplot2 gridExtra gtools markdown reshape2 rsconnect rstan shiny shinyjs shinythemes threejs xtable xts]; }; @@ -11208,7 +11705,7 @@ in with self; { showimage = derive2 { name="showimage"; version="1.0.0"; sha256="1c0x3iqjdjsz3cdhc02b3qm2pwxjr1q2k87jwvxj9lnzzw81f1pl"; depends=[png]; }; showtext = derive2 { name="showtext"; version="0.5-1"; sha256="0zb9h6frw580cql0nbkvfb0jajq6k4yhqaifvz8cpysd32dk35wm"; depends=[showtextdb sysfonts]; }; showtextdb = derive2 { name="showtextdb"; version="2.0"; sha256="1qwwj9x2jvadvwn60h75k99c9xi7yhqjsgaakahz5paxgj583bsh"; depends=[sysfonts]; }; - shp2graph = derive2 { name="shp2graph"; version="0-4"; sha256="13hpj2yjai3yf8q6dnhpdqzsw4nkdpi06fxxdgn82ycx0sp7zk4v"; depends=[igraph maptools sp]; }; + shp2graph = derive2 { name="shp2graph"; version="0-5"; sha256="1l9mg98hkb0bvr5dzd2p26g8mw5hqjxrym2gmbm10kyapvccfk56"; depends=[igraph maptools sp]; }; shrink = derive2 { name="shrink"; version="1.2.1"; sha256="0pd967wsys8fd7gyvr9y08km118yamfk5c1a1i2k8nr2ifpqmy0w"; depends=[MASS mfp rms survival]; }; shuffle = derive2 { name="shuffle"; version="1.0.1"; sha256="0aqb11h340picx7z2jg3k46l3pr6fkknlpyzc0z89hhrc90pss48"; depends=[]; }; shuffleCI = derive2 { name="shuffleCI"; version="0.1.0"; sha256="1n9k28m1fcnw1my9a7v0gy9waygd48lab45vj9k2wwijbc325zai"; depends=[plotrix]; }; @@ -11216,25 +11713,26 @@ in with self; { siar = derive2 { name="siar"; version="4.2"; sha256="1c4z72jr81dzkp9xqyrrkwjsalvvksl67pnbaadkc52v84fhzx3r"; depends=[bayesm coda hdrcde MASS mnormt spatstat]; }; sicegar = derive2 { name="sicegar"; version="0.2.2"; sha256="0fnr0wv8zbhs2i5y1kqyvhm0kzisc68ys3iy0wxwbdj3bnfgzj70"; depends=[dplyr fBasics ggplot2 minpack_lm]; }; sideChannelAttack = derive2 { name="sideChannelAttack"; version="1.0-6"; sha256="1xcsy1h8gc8a4f9nzs7zv8x6v55g1pg8vy1kg64iqxm0gnz2f20l"; depends=[ade4 corpcor infotheo MASS mmap]; }; - sidier = derive2 { name="sidier"; version="4.0.2"; sha256="1zzlgd20aw2asbsb3g9m5gvlmmgkai3bqrxyn48mphc2ncl4y7w0"; depends=[ape ggmap ggplot2 gridBase igraph network]; }; + sidier = derive2 { name="sidier"; version="4.0.3"; sha256="0pfzx0a5f597iqigq9xidm9b9xv18zaiqa35yp4xlk1y7gv0nj6c"; depends=[ape ggmap ggplot2 gridBase igraph network]; }; sidrar = derive2 { name="sidrar"; version="0.2.4"; sha256="1zwxafc4xaa4386a9jdg3gwflpdxql3f33bkqx1l2yl30x3517rw"; depends=[dplyr magrittr RCurl rjson rvest stringr tidyr xml2]; }; sievetest = derive2 { name="sievetest"; version="1.2.3"; sha256="17qrm7axvlr2yzp8brbibp26f8qdpqm85hc2kjzxm5zqwfvd6dfs"; depends=[]; }; sig = derive2 { name="sig"; version="0.0-5"; sha256="084wwpj5mnmq4k98ijbv23z80sj4axadc7c6hn3917dazsaa6ngn"; depends=[]; }; - sigQC = derive2 { name="sigQC"; version="0.1.20"; sha256="1s0z5pd8183q1v5pn07zwxckafhq0rhh7fzzny7xpjs79r50l9ii"; depends=[biclust circlize class cluster ComplexHeatmap fmsb gplots gridGraphics GSVA KernSmooth lattice MASS mclust moments nnet RankProd]; }; + sigQC = derive2 { name="sigQC"; version="0.1.21"; sha256="0794xvkz4fd81gqqpxzn5njv3d34nfxy0jl5zpixlnz0ap4c9vhx"; depends=[biclust circlize class cluster ComplexHeatmap fmsb gplots gridGraphics GSVA KernSmooth lattice MASS mclust moments nnet RankProd]; }; sigclust = derive2 { name="sigclust"; version="1.1.0"; sha256="0151v7lr4n4yyn93j0s06gzc9jh9xhdgvfw6kvpfy24jl6wdii7g"; depends=[]; }; sigmaNet = derive2 { name="sigmaNet"; version="1.1.0"; sha256="1i0xikwad9kiyrqxi1klkc4h4hyqfkxr388sw4mrx9pswfpbv3xr"; depends=[htmlwidgets igraph jsonlite RColorBrewer]; }; + sigmajs = derive2 { name="sigmajs"; version="0.1.1"; sha256="05fkwm0lkk3mg59ldc68y8sc58223zw1c3vgvxn09100bf6kfvyr"; depends=[crosstalk dplyr htmltools htmlwidgets igraph jsonlite magrittr purrr shiny]; }; sigmoid = derive2 { name="sigmoid"; version="0.3.0"; sha256="1sa6nmip3fizdk3r47pvx0h3qldn267arpmid0wa1pb7k5j2g682"; depends=[]; }; signal = derive2 { name="signal"; version="0.7-6"; sha256="1vsxramz5qd9q9s3vlqzmfdpmwl2rhlb2n904zw6f0fg0xxjfq3b"; depends=[MASS]; }; signalHsmm = derive2 { name="signalHsmm"; version="1.4"; sha256="1plyvx0pdid4zydxjwph6v96c8ilzgn55vcdszkslp3a4s2sns65"; depends=[Rcpp seqinr shiny]; }; signmedian_test = derive2 { name="signmedian.test"; version="1.5.1"; sha256="05n7a4h2bibv2r64cqschzhjnm204m2lm1yrwxvx17cwdp847hkm"; depends=[]; }; - sigora = derive2 { name="sigora"; version="2.0.1"; sha256="1sgjafr2f7carwnvp0vsvp80jn2bzwlkay38ch63qk9gapsh4imh"; depends=[]; }; - sigr = derive2 { name="sigr"; version="0.2.7"; sha256="0fdqlwblinb2dqlmcr7p679ppjh73aykgsmjffyaz0liiyk0zsc7"; depends=[wrapr]; }; + sigora = derive2 { name="sigora"; version="3.0.1"; sha256="1pz9jibxjvvbc0wmd7sj2fss6hd8h1fvcg8vg72qwqvfy3f9jdry"; depends=[]; }; + sigr = derive2 { name="sigr"; version="1.0.2"; sha256="1477xc3ba4zm0z73aqyrqd47x84184vp4v0zkzfxjw4y7rkw1anh"; depends=[wrapr]; }; siland = derive2 { name="siland"; version="1.0"; sha256="0zqwslg0vak22q475azwank81wr4kfx33h21w84lsg7iihrb08nv"; depends=[lme4 raster rgdal sp]; }; sim1000G = derive2 { name="sim1000G"; version="1.39"; sha256="1qxl7lsdsd4skn6x8iw7jx60ly0rwsj27yh5yiqmhxa34jpyjg0m"; depends=[hapsim MASS readr stringr]; }; simEd = derive2 { name="simEd"; version="1.0.3"; sha256="1yq0qblrz0zddx682rzwdaa0k0r223i123la7wbp73spnn38g4br"; depends=[rstream]; }; simFrame = derive2 { name="simFrame"; version="0.5.3"; sha256="154d4k6x074ib813dp42l5l8v81x9bq2c8q0p5mwm63pj0rgf5f3"; depends=[lattice Rcpp]; }; simIReff = derive2 { name="simIReff"; version="1.0"; sha256="0yi43splda8chnh4bq5x6chbrl5c0y9sv1k2m31763da0czayall"; depends=[bde extraDistr ks MASS np rvinecopulib truncnorm]; }; - simLife = derive2 { name="simLife"; version="0.3"; sha256="0bqhixr4zg7mwgxdsjk0h5a82dyfkhiv9xafw43w2bpnmyxywdia"; depends=[splancs unfoldr]; }; + simLife = derive2 { name="simLife"; version="0.5.1"; sha256="16idgxvc06m10k67y86agcdsv79ndi1d05zrajlnd5fap7n1w3d5"; depends=[splancs]; }; simMP = derive2 { name="simMP"; version="0.17.3"; sha256="1pzg79dd08ds3pfzxnk9h95gaibicv00mnm0jb4i8v5is4gzrdhr"; depends=[Biostrings BSgenome doParallel foreach GenomeInfoDb GenomicRanges IRanges XVector]; }; simMSM = derive2 { name="simMSM"; version="1.1.41"; sha256="04icijrdc269b4hwbdl3qz2lyxcxx6z63y2wbak1884spn6bzbs8"; depends=[mvna survival]; }; simPATHy = derive2 { name="simPATHy"; version="0.2"; sha256="0ai5wmjz8k0glbwkclgg3m3ncsjghja4iys2mn1psn3r8gxk79yc"; depends=[ggm graph gRbase htmlwidgets igraph mvtnorm qpgraph R_utils shiny shinydashboard]; }; @@ -11244,18 +11742,18 @@ in with self; { simTool = derive2 { name="simTool"; version="1.1.0"; sha256="121nv0s14jzxgcmj2fsj1k0msziknwbix2a49f7igic2l8yv869p"; depends=[dplyr plyr purrr reshape tibble tidyr]; }; simba = derive2 { name="simba"; version="0.3-5"; sha256="14kqxqavacckl5s1518iiwzrmlgbxz1lxy33y8c9qq7xaln41g9h"; depends=[vegan]; }; simboot = derive2 { name="simboot"; version="0.2-6"; sha256="0bgibrqb9j62p1chldi1lvdsgc6sgsr7afyq4lvyrc2h861f3j9d"; depends=[boot mvtnorm]; }; - simcausal = derive2 { name="simcausal"; version="0.5.4"; sha256="19mqabxqz2mvfhslbln5vsnlrnmgcfmgp7ypf5k2yd03755b0k4b"; depends=[assertthat data_table igraph Matrix R6 stringr]; }; simctest = derive2 { name="simctest"; version="2.5"; sha256="038ipxww0n09sh8al5isbm1fikr8kazwxn9cj2d0wgm6cdpy681n"; depends=[]; }; simdistr = derive2 { name="simdistr"; version="1.0.0"; sha256="0r7qfrq4vcjqrzajc6xmn0rrkinqwbr8cqghgp4iklbhsjbk2xfl"; depends=[]; }; simecol = derive2 { name="simecol"; version="0.8-12"; sha256="06zw9xhj8jwhmqwxxbj8hgz9cxrw1b4syy6z79aawv9cg1bnwfhf"; depends=[deSolve minqa]; }; simest = derive2 { name="simest"; version="0.4"; sha256="1wp08dkbshn5parq69d7iizp4g16qzpdim37kcg09pgsc3aghwaj"; depends=[cobs nnls]; }; simex = derive2 { name="simex"; version="1.7"; sha256="0dmyxhg3bk23y08xbgwlg791pcl3131im3jkh9x5pjqczfjvim0a"; depends=[]; }; simexaft = derive2 { name="simexaft"; version="1.0.7"; sha256="13w9m35qrrp8kkz4gqp7fg9jv8fs99y19n21bdxsd3f5mlkbvqgl"; depends=[mvtnorm survival]; }; - simglm = derive2 { name="simglm"; version="0.7.0"; sha256="1p29v8y3ahdkid35ky9sbj5227cvj0nn0ljzjpliyqwbkmxpncmj"; depends=[broom dplyr Matrix purrr rlang]; }; - simmer = derive2 { name="simmer"; version="3.8.0"; sha256="0d1m93ffnajvkf3wiqvbim5l1i10k30pr702wyazrg6b0c2kybkf"; depends=[BH codetools magrittr R6 Rcpp]; }; - simmer_bricks = derive2 { name="simmer.bricks"; version="0.1.0"; sha256="1sb1ayh56sbgs4p0r3frjjfn4vcdr43xm85lvb9aqk3wmj2lddqy"; depends=[simmer]; }; - simmer_plot = derive2 { name="simmer.plot"; version="0.1.13"; sha256="0afp4il95dmdgw815rk0c3cyf56gli237v4i716l4agag5l1rp60"; depends=[DiagrammeR dplyr ggplot2 scales simmer tidyr]; }; + simglm = derive2 { name="simglm"; version="0.7.1"; sha256="1y5j0a09svxq7gygw02l906pgs0lwv26qsikjy8vf5rmds58mcfd"; depends=[broom dplyr Matrix purrr rlang]; }; + simmer = derive2 { name="simmer"; version="4.0.1"; sha256="1vsg4540id6006pp7wdfwz3s7ny6adc3z9ynaw1qad2z0xnxcn6y"; depends=[BH codetools magrittr R6 Rcpp]; }; + simmer_bricks = derive2 { name="simmer.bricks"; version="0.2.0"; sha256="1i4vhklky7d837z35859jp5q43aabcw5zk3936017awdsn4fkn9r"; depends=[simmer]; }; + simmer_plot = derive2 { name="simmer.plot"; version="0.1.14"; sha256="0w72064h8s6b2fhz5nv3i6c86wvcxfvhybb96vh5ykr1xkqpybbh"; depends=[DiagrammeR dplyr ggplot2 scales simmer tidyr]; }; simmr = derive2 { name="simmr"; version="0.3"; sha256="18ycrd7qbz7frvd3bgbqaaapslw1jw89fy3np5qyb9sswyk08w9m"; depends=[boot coda compositions ggplot2 MASS reshape2 rjags viridis]; }; + simode = derive2 { name="simode"; version="1.1.1"; sha256="1v72ja8jf33biljqc64s35iv2q8igk62z852y5fxwssckm1nhcdd"; depends=[deSolve pracma quadprog]; }; simpleCache = derive2 { name="simpleCache"; version="0.3.1"; sha256="14jrsfxcrndfgi7yl5frfsyixxkhagc7cfav8h6mf6apfxx0v1ls"; depends=[]; }; simpleNeural = derive2 { name="simpleNeural"; version="0.1.1"; sha256="0rm6kvz1mppvgcvwsgg3nz6ci37l95ins64g0jh4rw6lfmy0grjc"; depends=[]; }; simpleRCache = derive2 { name="simpleRCache"; version="0.3.2"; sha256="0ldmxa5rw1kcb24swnk8s471ww11jfbscynaahnnsi0zzqmhwirk"; depends=[digest]; }; @@ -11268,43 +11766,45 @@ in with self; { simrel = derive2 { name="simrel"; version="1.0-1"; sha256="0905rjqh8c08vyg090h0i7sx89vdryignslldzfz2r5yrszl4ga8"; depends=[FrF2 sfsmisc]; }; simsalapar = derive2 { name="simsalapar"; version="1.0-10"; sha256="1q7kh44xl7q48vpqbyrp85my6x97l4fqq36bry8vg3k5riihirzf"; depends=[colorspace gridBase sfsmisc]; }; simsem = derive2 { name="simsem"; version="0.5-14"; sha256="1sg1zmngpviqpbsy8kxnw4f4x93gy3gh02ykmcw8j9falfnd7g6i"; depends=[lavaan]; }; - simstudy = derive2 { name="simstudy"; version="0.1.9"; sha256="0lix46xi02sfkd3nslqgcbnyfpgqhdz8kj5hh85b6ajly4hgw103"; depends=[data_table mvnfast Rcpp]; }; + simstandard = derive2 { name="simstandard"; version="0.1.0"; sha256="09jggrcfjjyr248rjr3nfrwmpr843z8h379cyxkl302s9g1qz57s"; depends=[lavaan mvtnorm tibble]; }; + simstudy = derive2 { name="simstudy"; version="0.1.10"; sha256="0wc3464np94m429jrwdna3im1z2r2yq2xxxr212ndw6is0bb5w9s"; depends=[data_table mvnfast mvtnorm Rcpp]; }; simsurv = derive2 { name="simsurv"; version="0.2.2"; sha256="1dfn156mm08l1cyp6wy69rd9a2lyy7qlbqa59jq35n9fhpjbrif0"; depends=[]; }; simtimer = derive2 { name="simtimer"; version="3.0.0"; sha256="0hfp652s97dz07fs92gfsaiwd6pwg95qsvr6qjwj1k5d3h6hzf8y"; depends=[]; }; - simukde = derive2 { name="simukde"; version="1.0.0"; sha256="1v4shnyba05mh0qaylivcjby6niz2yc4zb67qfbycifbj0cl14vh"; depends=[ks mvtnorm]; }; + simukde = derive2 { name="simukde"; version="1.1.0"; sha256="0g4qb57q1g9ixl70zwiw8y934gcr421xmz4dl515lxzfzk0605fc"; depends=[ks MASS mvtnorm]; }; simulator = derive2 { name="simulator"; version="0.2.0"; sha256="18x0c9bf9anbykq9f46fxnnx7g36bh01s4cdmrn7mdygs6ac9c8z"; depends=[magrittr]; }; simule = derive2 { name="simule"; version="1.3.0"; sha256="0jzyk1r2jfs7qivmy9x44c5bagy55jpy3hf0xpl9xnk409c3y2wd"; depends=[igraph lpSolve pcaPP]; }; sinaplot = derive2 { name="sinaplot"; version="1.1.0"; sha256="0zfq6l8wjvdj7rndsfyh0a2xjlxmn2ij1q50hg3xjfpwrjxcsck8"; depends=[plyr]; }; - sinew = derive2 { name="sinew"; version="0.3.5.1"; sha256="0fp5afjnkah3ig1c1fy23zlfxkfg590jai8iqf5s8wl8r4s0ywgm"; depends=[miniUI rstudioapi shiny sos stringi yaml]; }; + sindyr = derive2 { name="sindyr"; version="0.2.1"; sha256="0977qb9f2247y6bzlsp9lqfbmncq2prqr57myrgd6f60jc09n3mj"; depends=[arrangements crqa igraph matrixStats pracma]; }; + sinew = derive2 { name="sinew"; version="0.3.8"; sha256="1ggx7wgmgnsv69nnc55mg9g7rzjv5m23sygz7x8q68pybmjr7fc1"; depends=[cli crayon miniUI rematch2 rstudioapi shiny sos stringi yaml]; }; sinib = derive2 { name="sinib"; version="1.0.0"; sha256="08x2a5hn41vcsai3r36w1kgzka4ks53pkp6dxn90bsqh40ydb0db"; depends=[]; }; - siplab = derive2 { name="siplab"; version="1.2"; sha256="0r7gk9qsmbc3ln67cb8p87bq3s2rx6fbavlly1fpzqqv2isf5pq9"; depends=[spatstat]; }; + siplab = derive2 { name="siplab"; version="1.3"; sha256="1wl7i8i24mwmndkfjbk38kn49x4hrcs52sq1hfw8crqa20knaf12"; depends=[spatstat]; }; sirad = derive2 { name="sirad"; version="2.3-3"; sha256="0vhmk2fmq4797gj6c8803zw1ipmdxfvdfgi2bygzxbn5bqd4da2n"; depends=[raster zoo]; }; - sirt = derive2 { name="sirt"; version="2.6-9"; sha256="06iz4dxlsxdfgmn52pyiyng0bbxffc5b7sszwbzq5i64ad1j0d48"; depends=[CDM coda lavaan lavaan_survey MASS mirt mvtnorm Rcpp RcppArmadillo sfsmisc survey TAM]; }; + sirt = derive2 { name="sirt"; version="2.7-50"; sha256="1l1y65qr1ziapszm4n309q8gahcf55jfi7i2jj5v8wrg2b3g660w"; depends=[CDM coda lavaan lavaan_survey MASS mirt mvtnorm Rcpp RcppArmadillo sfsmisc survey TAM]; }; sisVIVE = derive2 { name="sisVIVE"; version="1.4"; sha256="1vh53irxgk8ahw52cdqbbm89dvmzyf54izg4lm8a3v92k5p6nzwz"; depends=[lars]; }; sisal = derive2 { name="sisal"; version="0.46"; sha256="00szc3l69i0cksxmd0lyrs4p6plf05sl4vxs3nl4gkbja5y4lvpc"; depends=[boot digest lattice mgcv R_matlab R_methodsS3]; }; sisus = derive2 { name="sisus"; version="3.9-13"; sha256="0lz9ww07dvdx6l3k5san8gwq09hycc3mqwpgzmr2ya9z8y27zadr"; depends=[coda gdata gtools MASS moments polyapost rcdd RColorBrewer]; }; sitar = derive2 { name="sitar"; version="1.1.0"; sha256="1a2x6igzq0i1vac54xyiq14vzx0m20431nv7aw0anv0lss7xy6r8"; depends=[dplyr nlme quantreg rlang tibble]; }; sitmo = derive2 { name="sitmo"; version="2.0.0"; sha256="11mzkdh01cfazxqxxlhm0ifbiggpw54k5n9qpz3vxbq10v9720h9"; depends=[Rcpp]; }; sitools = derive2 { name="sitools"; version="1.4"; sha256="0c0qnvsv06g6v7hxad96fkp9j641v8472mbphvaxa60k3xc7ackb"; depends=[]; }; - sitree = derive2 { name="sitree"; version="0.1-3"; sha256="1rs109sxvmsbx8w75iifbc14z685k9brk7fgfy0mjgkcxszafjwk"; depends=[data_table lattice latticeExtra]; }; + sitree = derive2 { name="sitree"; version="0.1-4"; sha256="0ypn9y1kighvh17yj1v83dkj973vqgzbr5lmkl761lam3m1fglq0"; depends=[data_table lattice latticeExtra]; }; sitreeE = derive2 { name="sitreeE"; version="0.0-2"; sha256="0w4gbdjphanfy614jv4zp70kl901zz5hblk35lyv7rjxifq5bpx0"; depends=[sitree]; }; sivipm = derive2 { name="sivipm"; version="1.1-3"; sha256="1l0j1bi38s09ax4kwikk615lyd074gzg1aa1j2jfmhr3igannm3z"; depends=[seqinr]; }; - sizeMat = derive2 { name="sizeMat"; version="0.3.0"; sha256="0766wxcc1980ivlib2saagl20y9dm0ar7i43qcqk2jpdbbaky33z"; depends=[MASS matrixStats mcmc MCMCpack]; }; - sjPlot = derive2 { name="sjPlot"; version="2.4.1"; sha256="0aazxrqsbp5jsd5yfm6hrx17rmlqbh5vs314xms7g620aj383zrh"; depends=[arm broom dplyr effects forcats ggeffects ggplot2 glmmTMB knitr lme4 magrittr MASS merTools modelr nlme psych purrr rlang scales sjlabelled sjmisc sjstats tibble tidyr tidyselect]; }; + sizeMat = derive2 { name="sizeMat"; version="1.0.0"; sha256="05dw4hgpw5msgy5cabf5dixr6ma66i9wz9wlajihqkpbg134jz1k"; depends=[MASS matrixStats mcmc MCMCpack]; }; + sjPlot = derive2 { name="sjPlot"; version="2.6.1"; sha256="13qvw2s3r96qfi8kfsn76m050ccnmckl31a9qv94xws8da99v2fk"; depends=[broom dplyr forcats ggeffects ggplot2 glmmTMB knitr lme4 magrittr MASS modelr nlme psych purrr rlang scales sjlabelled sjmisc sjstats tidyr]; }; sjdbc = derive2 { name="sjdbc"; version="1.6.0"; sha256="17ncgj2s2pjn3w3c1dgxv8g7y17h4p78iic86gsj2ahn0xpsmkcc"; depends=[rJava]; }; - sjlabelled = derive2 { name="sjlabelled"; version="1.0.11"; sha256="1bkjv36v7vwvwfal9qwfyvirnv72r080cq333q161bnq6vcp648y"; depends=[broom dplyr haven magrittr prediction purrr rlang snakecase tibble tidyselect]; }; - sjmisc = derive2 { name="sjmisc"; version="2.7.3"; sha256="1d588cpgnyhxyclchiv5fx0vi155mkh7ac252swg5fp4752skff7"; depends=[broom crayon dplyr haven magrittr pillar purrr rlang sjlabelled stringdist stringr tibble tidyr tidyselect]; }; - sjstats = derive2 { name="sjstats"; version="0.15.0"; sha256="1gy37k3ziyxlf336b9s5j2shp9qapwnr8ya8sfjyrs56naai411b"; depends=[bayesplot broom coin crayon dplyr emmeans glmmTMB lme4 lmtest magrittr MASS Matrix modelr nlme prediction purrr pwr rlang sandwich sjlabelled sjmisc tibble tidyr tidyselect]; }; + sjlabelled = derive2 { name="sjlabelled"; version="1.0.14"; sha256="0ayfzhm9bwjfaarq5z0gvn9kapjwj3532azgin97nr5fnjdhvgaw"; depends=[broom dplyr haven magrittr prediction purrr rlang snakecase]; }; + sjmisc = derive2 { name="sjmisc"; version="2.7.5"; sha256="05fjqfr2rfk11065zqkzb9mbqd6mgdkw9jdhq3by425a7f8m2dcg"; depends=[broom crayon dplyr haven magrittr purrr rlang sjlabelled stringdist stringr tidyr]; }; + sjstats = derive2 { name="sjstats"; version="0.17.1"; sha256="0s9b0xr8gmcm0kh48jkwk8ns0lqknd8kpys4f7czf0xwzmcx2n1z"; depends=[bayesplot broom coin crayon dplyr emmeans glmmTMB lme4 magrittr MASS Matrix modelr nlme purrr pwr rlang sjlabelled sjmisc tidyr]; }; skda = derive2 { name="skda"; version="0.1"; sha256="0a6mksr1d0j3pd0kz4jb6yh466gvl4fkrvgvnlmvivpv6b2gqs3q"; depends=[]; }; skeleSim = derive2 { name="skeleSim"; version="0.9.8"; sha256="1wxdl30cy8vr1cd0wcjxyklp6crw4bv8r77ma2dkzmxm2ma5jw92"; depends=[adegenet ape hierfstat igraph markdown pegas reshape2 rmetasim shiny shinyFiles strataG swfscMisc]; }; skeletor = derive2 { name="skeletor"; version="1.0.4"; sha256="1jfbfbkjx8mdwamsrkhvcnyn470in702vgcyw3g2dbgs84gl29q8"; depends=[]; }; skellam = derive2 { name="skellam"; version="0.2.0"; sha256="0r5wbs5h7xc3k2vjxd4axwnxr9cmwm008fcyj1vyixkg8fa680gx"; depends=[]; }; skewt = derive2 { name="skewt"; version="0.1"; sha256="1xm00zfzjv53cq9drfcx7w2ri5dwsq7kajrk2hc1mvw0b6s4x2ix"; depends=[]; }; skimr = derive2 { name="skimr"; version="1.0.3"; sha256="1c6szryq4w6gipmz7s5nn5936dbwly013czlcl6fky2yrhhjf25v"; depends=[cli dplyr knitr magrittr pander purrr rlang stringr tibble tidyr tidyselect]; }; - sklarsomega = derive2 { name="sklarsomega"; version="1.0"; sha256="0zyaycsbi4nnqx80lvipa43zphc032gw8bmxrx4blqb67xlfhp98"; depends=[hash LaplacesDemon Matrix numDeriv spam]; }; + sklarsomega = derive2 { name="sklarsomega"; version="2.0"; sha256="05ar391bsaixv83dah3qzfi50avsjhn85niyq5n05sb8d5943z9h"; depends=[extraDistr hash LaplacesDemon Matrix mcmcse numDeriv spam]; }; skm = derive2 { name="skm"; version="0.1.5.4"; sha256="06g3bdncq2r56d8k3dr87gqnibypbsps0gj4jxkw9q1sq1yaff3v"; depends=[data_table magrittr plyr Rcpp RcppArmadillo RcppParallel]; }; skmeans = derive2 { name="skmeans"; version="0.2-11"; sha256="1a8nwlym6pf0z13nnw1id2wls9lq788860yhjaqd56c3slzfsymn"; depends=[clue cluster slam]; }; - skpr = derive2 { name="skpr"; version="0.49.1"; sha256="0qsqa9lbrch5vs0hfp6k8vcrh0xgcjm23lpi5prrdh3h93lqjhxf"; depends=[doParallel doRNG foreach iterators kableExtra knitr lme4 nlme Rcpp RcppEigen rintrojs shiny shinythemes survival]; }; + skpr = derive2 { name="skpr"; version="0.56.1"; sha256="110qlb4ksp7c6ipv2w445ziwykqqbvs188gkg6sclb4rnzjy4lix"; depends=[car doParallel doRNG foreach future iterators kableExtra knitr lme4 magrittr nlme promises Rcpp RcppEigen rintrojs shiny shinyjs shinythemes survival viridis]; }; skynet = derive2 { name="skynet"; version="1.2.2"; sha256="1k6909fm40g6ianzjzbrv93x0fx2l8lnwl38krb7r50g1yk7lnrd"; depends=[data_table dplyr ggplot2 ggrepel igraph maps stringr]; }; skyscapeR = derive2 { name="skyscapeR"; version="0.2.2"; sha256="08h3vvn9zglw3xrl0xpyj95r1n3v6lk835a4nbanxdvi21mgpi77"; depends=[astrolibR doParallel foreach MESS numDeriv oce plotrix png pracma RColorBrewer rootSolve]; }; slackr = derive2 { name="slackr"; version="1.4.2"; sha256="1vm2h5fzcss3xx1annx68wrvv6c0s6h2ci0bipxmdl9amdaqw85w"; depends=[dplyr ggplot2 httr jsonlite]; }; @@ -11315,22 +11815,24 @@ in with self; { slickR = derive2 { name="slickR"; version="0.2.4"; sha256="14y4rwa450xqw6prdgp2l7xs9vv6zqbxwg7hc3hjgq47jy8qsdm1"; depends=[base64enc htmltools htmlwidgets xml2]; }; slim = derive2 { name="slim"; version="0.1.1"; sha256="0x9bk6w6lmw15s85gw9g8d1wlb57kkvnmx1wsyasn93x9llkjva1"; depends=[data_table MASS]; }; slimrec = derive2 { name="slimrec"; version="0.1.0"; sha256="1qzcvk7z8y11hwmybvppk1gf8di596zxy7qs22fclp6h6y18s377"; depends=[assertthat bigmemory glmnet Matrix pbapply]; }; + slouch = derive2 { name="slouch"; version="2.1.1"; sha256="1pzvlbqyby12m0pfspbih222mbhdcgmians8khd3yj9570djxqa7"; depends=[ape memoise]; }; slowraker = derive2 { name="slowraker"; version="0.1.1"; sha256="0glc3ldvbqkvzfvhs4s5mzx1kfz05px4k7rx5jfp9dm9d0gfpvsx"; depends=[NLP openNLP SnowballC]; }; slp = derive2 { name="slp"; version="1.0-5"; sha256="0i9iv0s1wdp9cyzr8qixh6c7qvrj025vll13gyf8dfbidrp6hryl"; depends=[mgcv]; }; - sm = derive2 { name="sm"; version="2.2-5.5"; sha256="1rw2mxygxsmk8mn4wag1ppjgzk0rlvh6zd8q02qrhjrn9jhi5qj3"; depends=[]; }; + sm = derive2 { name="sm"; version="2.2-5.6"; sha256="0c4whcx879gb4lwvqnzxl5n9xgpcqh2c54ip9ami3mwfprzcv45q"; depends=[]; }; smaa = derive2 { name="smaa"; version="0.3-0"; sha256="0y7j4q147fdk7fffyinc803mfzzsmcdfx8bp695w3wkq1wwy9kyl"; depends=[]; }; smac = derive2 { name="smac"; version="1.0"; sha256="1inn7i5k0q5vln24kazh3gl3szf6lxwnjr2rw70jcyn9dr9iy952"; depends=[]; }; smacof = derive2 { name="smacof"; version="1.10-8"; sha256="1q3xpfpcgsm98gzavkpsmsidch7sdxwr6iyqpz7cm8qiki8jgjzb"; depends=[candisc colorspace ellipse Hmisc MASS nnls plotrix polynom weights wordcloud]; }; smacpod = derive2 { name="smacpod"; version="2.0.4"; sha256="0dh8n3rxrffr09a8q7vdlin9hq5f2v0hjjjqsmzgwf7ln1b9wcr1"; depends=[abind pbapply plotrix sp spatstat]; }; smallarea = derive2 { name="smallarea"; version="0.1"; sha256="0jcv0xbh8v4g6zxxs4yyd0divwzk9d2w7g01r4s65khxvy3av7yx"; depends=[MASS]; }; - smam = derive2 { name="smam"; version="0.3-0"; sha256="1sdr0ki2y9smiwfglgh97kj6y0n1z3blyyxk823xp3467byk1rnb"; depends=[Matrix numDeriv Rcpp]; }; - smapr = derive2 { name="smapr"; version="0.1.2"; sha256="0j4ddlj5km0hmz9q61l93rm6gc7x6iyfgq1fbkjajmij0099mscr"; depends=[httr rappdirs raster rhdf5 rvest xml2]; }; + smam = derive2 { name="smam"; version="0.4.0"; sha256="00fgjcx0pqj03f4bhbzdcj8194l0y1rp34qp51p5vnnagdksj11j"; depends=[doParallel foreach Matrix nloptr numDeriv Rcpp RcppGSL RcppParallel]; }; + smapr = derive2 { name="smapr"; version="0.2.0"; sha256="13nvcfz4c2ipfb6ad9x59fm950prpdd991lzvszkdhsp53d0z9l4"; depends=[httr rappdirs raster rhdf5 rvest xml2]; }; smart = derive2 { name="smart"; version="1.0.1"; sha256="0ki3qn71zrw0nyv395qijcwahnxyv1p21j8x6cxr9spah2wzz8lb"; depends=[elasticnet gplots gtools igraph Matrix pcaPP PMA]; }; + smartdata = derive2 { name="smartdata"; version="1.0.0"; sha256="011yhhyfczzp90bzzfy6zh9nl7ikr6g7d0nghx63qvh89i823g2s"; depends=[adaptiveGPCA Amelia Boruta checkmate class clusterSim denoiseR discretization DMwR FSelector functional imbalance infotheo lle magrittr mice missForest missMDA MVN NoiseFiltersR outliers RoughSets unbalanced VIM]; }; smartsizer = derive2 { name="smartsizer"; version="1.0.1"; sha256="0m474f6dz0izwdh2xvgx6shsbkpr969ckcld56d7c589kjhapbrl"; depends=[MASS]; }; smatr = derive2 { name="smatr"; version="3.4-8"; sha256="0qqqbg65flxh48sw7x90zvgzbpcfzb1811h0pz3zlhdw9a7khs9n"; depends=[]; }; - smbinning = derive2 { name="smbinning"; version="0.6"; sha256="13izdq2pl7hi8ppzmpmiiz4pmc43m63ixjrbj9lwa371vx60ndmh"; depends=[Formula gsubfn partykit sqldf]; }; + smbinning = derive2 { name="smbinning"; version="0.7"; sha256="1pf74ys0jgm160zrwf8kv5j5bgb4i9z8cayirfxhwjdw9rc0w61p"; depends=[Formula gsubfn partykit sqldf]; }; smcUtils = derive2 { name="smcUtils"; version="0.2.2"; sha256="0d1kmg386j0zrpp8vgxjwvpf1i25l86xrh82767xkp0n9qj8srwq"; depends=[]; }; - smcfcs = derive2 { name="smcfcs"; version="1.3.0"; sha256="1860qzhfpdr78a8ha8537izbkm0dx9j63l9fv6mswcs5sjl25i09"; depends=[MASS survival VGAM]; }; + smcfcs = derive2 { name="smcfcs"; version="1.3.1"; sha256="0f3sd4pz46wjpyw932qrxw4hr3fmdbjrhcrgfmvm89hp0r09vz74"; depends=[MASS survival VGAM]; }; smco = derive2 { name="smco"; version="0.1"; sha256="1sj3y1x6pc32cwzyhn9gaxs964xh5xl4vw08hsa8kfcxhh2r0s99"; depends=[]; }; smcure = derive2 { name="smcure"; version="2.0"; sha256="1j7fxnb0sx57a0l929c3haz4f1y829ymlq0cvdh0cia4qp6ydv60"; depends=[survival]; }; smdata = derive2 { name="smdata"; version="1.2"; sha256="1p26b46kg4hmhs2fl9h9vchar00llqv58ylx438bjgzz4f229qvr"; depends=[]; }; @@ -11338,15 +11840,15 @@ in with self; { smds = derive2 { name="smds"; version="1.0"; sha256="0aqf3wfn6mlsl8a32gaf9qdpyxwsx19g6mma8qzgaysdmk6vhbpd"; depends=[MASS]; }; sme = derive2 { name="sme"; version="1.0.2"; sha256="0gszpy1sx2qsypps3iza79sab475wcrscl7wnbbrv97a3ry0ybp6"; depends=[lattice]; }; smerc = derive2 { name="smerc"; version="0.4.5"; sha256="1455fjfihznzivz80jad7pyfjms8yyvmsz6wqdvqv3n6dsyr8fvb"; depends=[fields maps matrixStats smacpod sp SpatialTools spdep]; }; - smfsb = derive2 { name="smfsb"; version="1.1"; sha256="0khd23b6k9zgxz2x6g6c6k2g32mbpli32izdq6fgk1a990kdsp6j"; depends=[]; }; - smicd = derive2 { name="smicd"; version="1.0.1"; sha256="05v1lwl2jacrzd4fcp7d386gd70q1kcrr96pnq39zdsniq2j7dn9"; depends=[formula_tools ineq laeken lme4 MuMIn mvtnorm spatstat truncnorm weights]; }; + smfsb = derive2 { name="smfsb"; version="1.3"; sha256="1328w7zpwd3nam6ha4bh14g919jjl87v323ijmbp1j71gc64nn2i"; depends=[abind]; }; + smicd = derive2 { name="smicd"; version="1.0.2"; sha256="1hylmii2nd0v2k8zksrd0bh882mqj16vdrxmal2lv79x3fb7jpkb"; depends=[formula_tools ineq laeken lme4 MuMIn mvtnorm spatstat truncnorm weights]; }; smirnov = derive2 { name="smirnov"; version="1.0-1"; sha256="09mpb45wj8rfi6n6822h4c335xp2pl0xsyxgin1bkfw97yjcvrgk"; depends=[]; }; smnet = derive2 { name="smnet"; version="2.1.1"; sha256="0fa47zgm7jxvs3jfai54wsc6qa9ycqw4f3yr941fvkczwzh4ch02"; depends=[DBI RSQLite spam SSN]; }; smoof = derive2 { name="smoof"; version="1.5.1"; sha256="01jkldmxn86vmcmmz81mdlhpm1m3bddj4sv550a3b4wm1r3gddng"; depends=[BBmisc checkmate ggplot2 mco ParamHelpers plot3D plotly RColorBrewer Rcpp RcppArmadillo RJSONIO]; }; - smooth = derive2 { name="smooth"; version="2.4.5"; sha256="0yp7ziikd1w0j091c49zqbfwypp49rfxpn410kbh09bay2fb58x1"; depends=[forecast greybox nloptr Rcpp RcppArmadillo zoo]; }; + smooth = derive2 { name="smooth"; version="2.4.6"; sha256="1fcfhf7vzhvfa977a8wwgg4j1pb763a0yr4jzjkk1ah350h49vc4"; depends=[forecast greybox nloptr Rcpp RcppArmadillo zoo]; }; smoothAPC = derive2 { name="smoothAPC"; version="0.3"; sha256="11f34qqdm8m0hmy9jf29q439slchvmqgdfrmak7vcdhfnjcylr5r"; depends=[colorspace lmtest quantreg rgl SparseM]; }; smoothHR = derive2 { name="smoothHR"; version="1.0.2"; sha256="0l33xg3p9pyfrp4rhavz8m1jakk4wr8i14g6jjiizb03rpxdpzqy"; depends=[survival]; }; - smoothSurv = derive2 { name="smoothSurv"; version="2.0"; sha256="0ypgmqf7mj0x0ibid9qx6cbqn4cpig8333g095b64297bf0syvjc"; depends=[survival]; }; + smoothSurv = derive2 { name="smoothSurv"; version="2.0.1"; sha256="0srb6ms1ag3mllkf2rh0pnji9zp8c11mh8i5zgb6zh1nx2s86x93"; depends=[survival]; }; smoother = derive2 { name="smoother"; version="1.1"; sha256="0nqr1bvlr5bnasqg74zmknjjl4x28kla9h5cxpga3kq5z215pdci"; depends=[TTR]; }; smoothie = derive2 { name="smoothie"; version="1.0-1"; sha256="12p4ig8fbmlsby5jjd3d27njv8j7aiwx0m2n1nmgvjj0n330s1kj"; depends=[]; }; smoothmest = derive2 { name="smoothmest"; version="0.1-2"; sha256="14cri1b6ha8w4h8m26b3d7qip211wfv1sywgdxw3a6vqgc65hmk5"; depends=[MASS]; }; @@ -11359,16 +11861,16 @@ in with self; { smss = derive2 { name="smss"; version="1.0-2"; sha256="04lgfdcvnzpnpplyl62fy7slyiy8wkqpjjrzmclgqis3c9zkkncp"; depends=[]; }; sn = derive2 { name="sn"; version="1.5-2"; sha256="16gwr68zzj5v83bqfmzxnzwig3dnjrkxdhs6clri1caqkvrq6aig"; depends=[mnormt numDeriv]; }; sna = derive2 { name="sna"; version="2.4"; sha256="1ks8819qvpdfansfqj9p32s1rhvl26frvbi78m4rx1wd1qcv74i2"; depends=[network statnet_common]; }; - snakecase = derive2 { name="snakecase"; version="0.9.1"; sha256="02462vd08asm4ah2brrc3z2s1lqcya80shrd6w743cylv3h3hpyv"; depends=[stringi stringr]; }; + snakecase = derive2 { name="snakecase"; version="0.9.2"; sha256="1g6xai53dl24ws0mwhqrkcv583ziaq505cv3z8v5dhjgy98kilyj"; depends=[stringi stringr]; }; snappier = derive2 { name="snappier"; version="0.1.0"; sha256="0334zwhqdl3lfw7rg8ql7z10qj8jjrm17yi9mgdcxnzaf3f1p859"; depends=[]; }; snapshot = derive2 { name="snapshot"; version="0.1.2"; sha256="0cif1ybxxjpyp3spnh98qpyw1i5sgi1jlafcbcldbqhsdzfz4q10"; depends=[]; }; snht = derive2 { name="snht"; version="1.0.5"; sha256="0k8w1118b2qrf5zfi902gm6zf7b1mwv7py7wg57vsibh2r2ra8ah"; depends=[ggplot2 gridExtra mgcv plyr reshape2 zoo]; }; snipEM = derive2 { name="snipEM"; version="1.0"; sha256="0f98c3ycl0g0l3sgjgk7xrjp6ss7n8zzlyzvpcb6agc60cnw3w03"; depends=[GSE MASS mvtnorm Rcpp RcppArmadillo]; }; snn = derive2 { name="snn"; version="1.1"; sha256="0yywn3v1iz9xizwli3gmzprkx66b5a813mbp8hq2vsj8n4lfj8r5"; depends=[]; }; snnR = derive2 { name="snnR"; version="1.0"; sha256="0qrl5ivpmipibszx8k9fvd8g462zzdcmzbjj1hb8apv4z79gzima"; depends=[]; }; - snow = derive2 { name="snow"; version="0.4-2"; sha256="1mxbrkpnmq32x4wd0194d541661yvfrrjlr3lsf7qq53ms3h21zf"; depends=[]; }; + snow = derive2 { name="snow"; version="0.4-3"; sha256="1n3n8pva9s34fvlw32yng0x416lmbv7q1fsd0ywa4kikmxym64l5"; depends=[]; }; snowFT = derive2 { name="snowFT"; version="1.6-0"; sha256="00rq2xibzhx7441v9jg138a4fkmx28hifs4yyj3pwi8najf0df4n"; depends=[rlecuyer snow]; }; - snowboot = derive2 { name="snowboot"; version="0.5.2"; sha256="07mly89x9mj5cvpmi45xmlr4d1l1d2fdcagmniviqqqhmllc50pi"; depends=[igraph Rcpp VGAM]; }; + snowboot = derive2 { name="snowboot"; version="1.0.0"; sha256="1fqvij959699bfyzc2b2dmgkm3nm119b2zg0jh29mpka3v5qqy3n"; depends=[igraph Rcpp Rdpack VGAM]; }; snowfall = derive2 { name="snowfall"; version="1.84-6.1"; sha256="13941rlw1jsdjsndp1plzj1cq5aqravizkrqn6l25r9im7rnsi2w"; depends=[snow]; }; snowflakes = derive2 { name="snowflakes"; version="1.0.0"; sha256="0adna9jfs0wv4dhyjczxhq7c0ldjfai07p1q9119avxyilv9x0vi"; depends=[]; }; snp_plotter = derive2 { name="snp.plotter"; version="0.5.1"; sha256="16apsqvkah5l0d5qcwp3lq2jspkb6n62wzr0wskmj84jblx483vv"; depends=[genetics]; }; @@ -11381,7 +11883,7 @@ in with self; { sns = derive2 { name="sns"; version="1.1.2"; sha256="132zd57xb2y0nshw4lakf49r2mvvkv7j32f7l7hqrh91mw7wyqpr"; depends=[coda mvtnorm numDeriv]; }; soc_ca = derive2 { name="soc.ca"; version="0.7.3"; sha256="0z3phmvgwd3s6swfaywq851my12a2n48i6k26vhggc6pf9d28phl"; depends=[ellipse ggplot2 ggrepel gridExtra reshape2 shiny]; }; social = derive2 { name="social"; version="1.0"; sha256="0ny81bhj80rlwwa6cgbkdz2rxz6bp0f3nvjr1sqxr4s8l8rnf4ic"; depends=[Rcpp]; }; - socialmixr = derive2 { name="socialmixr"; version="0.1.2"; sha256="0cj8l1gl7c9hk3hpznfqhblmh79qvi9866713sry538f3kkv897c"; depends=[countrycode curl data_table httr jsonlite oai stringr wpp2015 XML]; }; + socialmixr = derive2 { name="socialmixr"; version="0.1.3"; sha256="16z0ykbji9vh2j0d02x6vcrxwwqpzjckfxr1wjkvfc86mqpgpqmd"; depends=[countrycode curl data_table httr jsonlite oai stringr wpp2015 XML]; }; sodavis = derive2 { name="sodavis"; version="1.2"; sha256="1jf5sml51qxlpgv5b1rvyig4dm4ijw2hpnk85zf790jp22xm64jw"; depends=[MASS mvtnorm nnet]; }; sodium = derive2 { name="sodium"; version="1.1"; sha256="1zxzi8xvxnhgcd5qrylf08nz1cdq3aslrswjas440qg63ypmbf6w"; depends=[]; }; sofa = derive2 { name="sofa"; version="0.3.0"; sha256="10f01a23bq6a30f95cilfan588dg0bg36y7g14q46rmcz15cqbrx"; depends=[crul jsonlite mime R6]; }; @@ -11393,7 +11895,7 @@ in with self; { soilDB = derive2 { name="soilDB"; version="2.0-1"; sha256="0nzi0fss77x0bjdzslhy0flwvhap0i0cq3xw82x7sggnbmc3ya72"; depends=[aqp curl Hmisc plyr raster reshape2 sp xml2]; }; soilcarbon = derive2 { name="soilcarbon"; version="1.2.0"; sha256="1gxq7np5xh3jcqbsf8xva4b82rv6rab2j23mbkc4pjs6nbnzvzba"; depends=[devtools ggplot2 openxlsx shiny]; }; soilphysics = derive2 { name="soilphysics"; version="3.1"; sha256="11c094bqbwhggh0n3hdva1321gqzz2k1b7v3767wyyk1xpgzg98r"; depends=[boot MASS rpanel tkrplot]; }; - soiltexture = derive2 { name="soiltexture"; version="1.4.6"; sha256="1ak8vp6y2cb04118bw5inmwwgjvbxmzpbarr6ga7r1w5i16c7nk7"; depends=[MASS sp]; }; + soiltexture = derive2 { name="soiltexture"; version="1.5.1"; sha256="1l9npvk910488qzd45ibc7ss557hnkb78lx1p6fs3nhl8sacgyxh"; depends=[MASS sp]; }; soilwater = derive2 { name="soilwater"; version="1.0.5"; sha256="11gal7hj73j82qx65krmzpmf0gpm41ph8hw70df46dbf4w23vvjn"; depends=[]; }; sokoban = derive2 { name="sokoban"; version="0.1.0"; sha256="07r2zv9rynvw06fpncrz3rsmkdy6z2pcvmm559bhs428kmnq2xib"; depends=[]; }; solaR = derive2 { name="solaR"; version="0.44"; sha256="1waxi2zfns4dh1vpsl3khbgaw07icp4f1ax9l0pry9qipmk0nk3k"; depends=[lattice latticeExtra RColorBrewer zoo]; }; @@ -11401,14 +11903,14 @@ in with self; { solarius = derive2 { name="solarius"; version="0.3.0.2"; sha256="17c765nxq81xshyyl4lfhqjmgvmhn9xyzc6x4qd33wvhh4148f38"; depends=[data_table ggplot2 plyr]; }; solrad = derive2 { name="solrad"; version="0.99.0"; sha256="1r3bz2nvg660bfba9xbqlzrysvn0wpmn948qx3hfbqcv5ihcnly3"; depends=[]; }; solrium = derive2 { name="solrium"; version="1.0.0"; sha256="1rlf60kynqb8pvzllfdkiabxgnqx60hwm8vy86y9f2bh7d7jsdhf"; depends=[crul dplyr jsonlite plyr R6 tibble xml2]; }; - solvebio = derive2 { name="solvebio"; version="2.5.0"; sha256="1053pmmm1bl5kfrgmlbfnb6xywvv4nwrd6mwn9kyj2p63akvwq1s"; depends=[dplyr httr jsonlite mime]; }; + solvebio = derive2 { name="solvebio"; version="2.6.1"; sha256="17zcnfmccfl2njv1ph40jchxb06x0qhgn82fz4yg8nqyf8b9cq5h"; depends=[dplyr httr jsonlite mime]; }; som = derive2 { name="som"; version="0.3-5.1"; sha256="1fbza1jxvwrkf5x3inkj36vshhkn7mz0ajqlxalbfmk6ngjw1x56"; depends=[]; }; som_nn = derive2 { name="som.nn"; version="1.1.0"; sha256="0mw2c2lqvdq9bhndpjyawjy43l4x7clcsx2350j45g7fnchhy602"; depends=[class hexbin kohonen som]; }; soma = derive2 { name="soma"; version="1.1.1"; sha256="1mc1yr9sq9h2z60v40aqmil0xswj5hgxfdh4racq297qw3a97my4"; depends=[reportr]; }; someKfwer = derive2 { name="someKfwer"; version="1.2"; sha256="0widny5l04ja91fy16x4giwrabwqhx0fs3yl48pv9xh4zj6sx563"; depends=[]; }; someMTP = derive2 { name="someMTP"; version="1.4.1"; sha256="19bsn8rny1vv9343bvk8xzhh82sskl0zg0f5r59g9k812q5llchn"; depends=[]; }; somebm = derive2 { name="somebm"; version="0.1"; sha256="1iwwc94k6znh4d3bbjnvwp4chc4wg0iy4v2f99cs4jasrsimb4p8"; depends=[]; }; - sommer = derive2 { name="sommer"; version="3.5"; sha256="1qsg822y3fsqs7knc8vwlhnnh51d8f8rn7yzvmxiqd8qnrkkmbix"; depends=[data_table lattice MASS Matrix]; }; + sommer = derive2 { name="sommer"; version="3.6"; sha256="1znp5svj2l2632ivnilc0060x8k8mbiv55ppgfcmnj5d22vlb06q"; depends=[data_table lattice MASS Matrix]; }; somplot = derive2 { name="somplot"; version="1.6.4"; sha256="06c8p2lqz3yxmxdl7ji8a3czvxnsbl7bwyiig76pkwc3a5qqfbb9"; depends=[hexbin]; }; sonar = derive2 { name="sonar"; version="1.0.2"; sha256="1f0f5iqi3y9vnxyym14nm8dqxw0vcpnxmvvkx4sm612i4fclg1f9"; depends=[]; }; sonicLength = derive2 { name="sonicLength"; version="1.4.4"; sha256="1v46xzx3jxxxs2biyrq6xbv2lhpz1i95la93hj6dl4jfyikmx0im"; depends=[]; }; @@ -11424,7 +11926,7 @@ in with self; { sotu = derive2 { name="sotu"; version="1.0.2"; sha256="0aqwkawaydsm91hz13msjg1a5llg7xmv6hxmfmsaganrl7iaym3c"; depends=[]; }; sound = derive2 { name="sound"; version="1.4.5"; sha256="1kbbb614d0fmj9l0yjiwf5yqnl7sby4xklp7qwp6rwjvq9bnm0ab"; depends=[]; }; soundecology = derive2 { name="soundecology"; version="1.3.3"; sha256="16h6gbdlyav7wbfisdv1f2zsqhr45liidgj7qqk8giwjxgan8q97"; depends=[ineq oce pracma seewave tuneR vegan]; }; - soundgen = derive2 { name="soundgen"; version="1.2.0"; sha256="1k6my6lcwy36fa25glyd8vfr3b57fwx7nz4s24bkf40vp0vkpsc2"; depends=[dtw mvtnorm phonTools plyr reshape2 seewave shiny tuneR zoo]; }; + soundgen = derive2 { name="soundgen"; version="1.3.1"; sha256="0hsd00bmm6szvx0pjlprqg4749pwr39hippwvl5fkwm8fqb482p5"; depends=[dtw mvtnorm phonTools plyr reshape2 seewave shiny tuneR zoo]; }; source_gist = derive2 { name="source.gist"; version="1.0.0"; sha256="03bv0l4ccz9p41cjw18wlz081vbjxzfgq3imlhq3pgy9jdwcd8fp"; depends=[RCurl rjson]; }; sourceR = derive2 { name="sourceR"; version="1.0.1"; sha256="01qxa44s9szaxl0rdcx4p0wn4vby17hdzdjzpsbls3prsnr0jaad"; depends=[assertthat cluster dplyr gplots gtools hashmap R6 reshape2 SPIn tensorA]; }; sourcetools = derive2 { name="sourcetools"; version="0.1.7"; sha256="1jnjir0q2dj724f1mjm6p5h77yzyx6xcqy9r2g7gmcxkxw349627"; depends=[]; }; @@ -11433,46 +11935,48 @@ in with self; { spAddins = derive2 { name="spAddins"; version="0.2.0"; sha256="19wbcghcf0f9qvqy92jhsdcpmd9b4lkhxndvr71cyhzga539lh1n"; depends=[magrittr purrr rstudioapi stringr]; }; spBayes = derive2 { name="spBayes"; version="0.4-1"; sha256="1cypl3kvcr7nwdkq59zpdhkasz0z5r2gk8hr6wf1a1992k8c33ag"; depends=[abind coda Formula magic]; }; spBayesSurv = derive2 { name="spBayesSurv"; version="1.1.3"; sha256="0syb4x05j878jhcql8prfw1aqxmpi1idxk1d4xl52j32wngkpn8b"; depends=[coda fields MASS Rcpp RcppArmadillo survival]; }; - spData = derive2 { name="spData"; version="0.2.9.0"; sha256="1yzgfbihpx9xj2vw6amm5sqib9d8xs4p964hlqbvypp4hfphnpwc"; depends=[]; }; + spCP = derive2 { name="spCP"; version="1.0"; sha256="1qi5p77kjwkv8c84j20mx0zm4y4vycip4ghgf6jqhn14d4ifvkmj"; depends=[msm mvtnorm Rcpp RcppArmadillo]; }; + spData = derive2 { name="spData"; version="0.2.9.4"; sha256="039rf7c5npv0xhw46ja5igravi3l0zcg9vfkngza1vn4zwgg1yi8"; depends=[]; }; spFSR = derive2 { name="spFSR"; version="1.0.0"; sha256="0094plnjlyhnnjqw3i4an5q95bw6hjy1gzc7zr6wy77faivqsbms"; depends=[class ggplot2 mlbench mlr parallelMap tictoc]; }; - spGARCH = derive2 { name="spGARCH"; version="0.1.5"; sha256="14r8b2hj211r3bqk44l5y4zvlqbk6h8pa5i25rn0d9fqr37cks1f"; depends=[Matrix Rcpp RcppEigen Rsolnp spdep truncnorm]; }; + spGARCH = derive2 { name="spGARCH"; version="0.1.6"; sha256="10ksbqk5s9qq6lz17h07kmg2gr1ppq2rjm06kipscs9v0zldki9l"; depends=[Matrix Rcpp RcppEigen Rsolnp spdep truncnorm]; }; spMC = derive2 { name="spMC"; version="0.3.9"; sha256="10cvha5j2pi3b2qiq3jbrc10yi84a595zlg0wshx3wrzxb1rim85"; depends=[]; }; spMaps = derive2 { name="spMaps"; version="0.3"; sha256="0w4rrzbybaf9zgb09zg0zkf2hgvfrwx57yzbxm4px1ygdfxyi4cm"; depends=[raster rgeos sp]; }; spNNGP = derive2 { name="spNNGP"; version="0.1.1"; sha256="0b55arvy5xr592bs2082djyzaa48jbv0y85h7nnj479f8c31grqp"; depends=[coda Formula RANN]; }; spTDyn = derive2 { name="spTDyn"; version="2.0"; sha256="0wandd5iqyqb474096lky04rrgj31gnyqnlmgw8ypxsypd0gqdy0"; depends=[coda sp spacetime spTimer]; }; spTest = derive2 { name="spTest"; version="0.2.5"; sha256="11x2wq3031mqbj4n6hvb4l3sp4382qankdl1v1qh7ab2xa0h6xw8"; depends=[geoR sp]; }; spThin = derive2 { name="spThin"; version="0.1.0"; sha256="06qbk0qiaw7ly1ywbr4cnkmqfasymr7gbhvq8jjbljm0l69fgjpp"; depends=[fields knitr spam]; }; - spTimer = derive2 { name="spTimer"; version="3.1"; sha256="1b3d8z8bb8jagr4vcxwqfcq2y37hb975v75ggmpc02jvy228xs1z"; depends=[coda extraDistr sp spacetime]; }; + spTimer = derive2 { name="spTimer"; version="3.2"; sha256="1hw40jb8n9amg3i1lyjlc26gpafxd0jjf3yw5r24pqlh0d11n0i7"; depends=[coda extraDistr sp spacetime]; }; spa = derive2 { name="spa"; version="2.0"; sha256="1np50qiiy3481xs8w0xfmyfl3aypikl1i1w8aa5n2qr16ksxrnq3"; depends=[cluster MASS]; }; - spaMM = derive2 { name="spaMM"; version="2.4.35"; sha256="1b013kyrhld2y4wr69v4bkii4qjp38hrp1srmmj5ldb68zw3vadz"; depends=[MASS Matrix nlme nloptr pbapply proxy Rcpp RcppEigen]; }; + spaMM = derive2 { name="spaMM"; version="2.5.0"; sha256="00y2n0k9qq54qa1vz72q7g6m3nq62n6wm3vxx2c540k404kil8p3"; depends=[MASS Matrix nlme nloptr pbapply proxy Rcpp RcppEigen]; }; spaa = derive2 { name="spaa"; version="0.2.2"; sha256="163iipz1knxx1lzby9a3n1f014yqkf25z1wpwwy4gbx7sia499d5"; depends=[]; }; space = derive2 { name="space"; version="0.1-1"; sha256="1qigfz62xz47hqi43aii3yr4h7ddvaf11a5nil7rqprgkd0k6mv3"; depends=[]; }; spaceNet = derive2 { name="spaceNet"; version="1.0.1"; sha256="005jz7bm3c7zi3pgm8wyivc2kl058c0lwdjjzv0qb1vdsq9mpxx1"; depends=[MASS permute RcppTN Rfast sna vegan]; }; spacejam = derive2 { name="spacejam"; version="1.1"; sha256="1mdxmfa1aifh3h279cklm4inin0cx3h0z2lm738bai34j6hpvar7"; depends=[igraph Matrix]; }; - spacesRGB = derive2 { name="spacesRGB"; version="1.0-4"; sha256="0bifagywaksn27cdfsln52f5nwsaj347xilp812shmcma29b08ig"; depends=[]; }; - spacetime = derive2 { name="spacetime"; version="1.2-1"; sha256="1i6yrmyr9vc5lr99w7qhr0jqdx97ckjqay5g0lqdrk98sygpfl4g"; depends=[intervals lattice sp xts zoo]; }; + spacesRGB = derive2 { name="spacesRGB"; version="1.1-1"; sha256="1298dxzli8f4bpv8114y7d9r7d2i80qvbmc9n67znpg5wdib79b7"; depends=[]; }; + spacesXYZ = derive2 { name="spacesXYZ"; version="1.0-1"; sha256="1v6ancnd0k6rpf5b4bh4ndk9d8rlvlqd17snnlq53mr1pm9a2hp8"; depends=[]; }; + spacetime = derive2 { name="spacetime"; version="1.2-2"; sha256="0bgaarh2ibj3z6z504mzcb94x6w2bh5vyn1ar1lllqf4wn93z78y"; depends=[intervals lattice sp xts zoo]; }; spacodiR = derive2 { name="spacodiR"; version="0.13.0115"; sha256="0c0grrvillpwjzv6fixviizq9l33y7486ypxniwg7i5j6k36nkpl"; depends=[colorspace picante Rcpp]; }; spacom = derive2 { name="spacom"; version="1.0-5"; sha256="0b6yh4q9f0ibwlwyckwaya9m645j22x6bdz9mz3chass8qza6bls"; depends=[foreach iterators lme4 Matrix nlme spdep]; }; - spacyr = derive2 { name="spacyr"; version="0.9.9"; sha256="1zdn57k5iacy73xmac32mslqzidpn3d38qyrnbzkzv2slysqwgkw"; depends=[data_table reticulate]; }; - spaero = derive2 { name="spaero"; version="0.2.0"; sha256="0srkah89z23j30y2smlnyhf97mm123apma8vgmgfarbx188bkwpn"; depends=[]; }; - spagmix = derive2 { name="spagmix"; version="0.2-0"; sha256="16yzkq1z5qj21milyw98a5bk7gvi6k3mbwgvnw7s8ckr40pbp48l"; depends=[abind MCMCpack mvtnorm sparr spatstat]; }; + spacyr = derive2 { name="spacyr"; version="0.9.91"; sha256="03dpp26lq4a5x0p5l3l8d2gs9v2pc13c14ir8vf7ws46970f6var"; depends=[data_table reticulate]; }; + spaero = derive2 { name="spaero"; version="0.3.0"; sha256="1l6h6mri78b49mw6b1d9dirygfj57pdyqx6822llnj3wkdn2x87v"; depends=[]; }; + spagmix = derive2 { name="spagmix"; version="0.3-1"; sha256="0xfrm4i28sy490g5324bc43dxlrgcnzxg27gsd5b81mqi03sry9j"; depends=[abind mvtnorm RandomFields sparr spatstat]; }; spam = derive2 { name="spam"; version="2.2-0"; sha256="02v78dmf263drmz3y099gbakbcvaxkb18900s7sw440cjfv691d1"; depends=[dotCall64]; }; spam64 = derive2 { name="spam64"; version="2.2-0"; sha256="1kyj93drzvd4ph6x7wr318xq3ldrrdxb17rwxws39wa4gj7jkmkg"; depends=[]; }; spanel = derive2 { name="spanel"; version="0.1"; sha256="1riyvvfij277mclgik41gyi01qv0k466wyk2wbqqhlvrlj79yzsc"; depends=[]; }; spanish = derive2 { name="spanish"; version="0.3.2"; sha256="1dg4wnvxhybhagag9xx27af6760dlclaivx27mfxywfha312xfpn"; depends=[magrittr xml2]; }; - spant = derive2 { name="spant"; version="0.10.0"; sha256="0kvxaaqij2wnjchp4zrqkwnsp6g767mx840xvyb8lq01a9k7jjyn"; depends=[abind complexplus foreach magrittr matrixcalc minpack_lm nnls plyr pracma readr signal smoother stringr svd tibble tkrplot]; }; + spant = derive2 { name="spant"; version="0.11.0"; sha256="0fy5fsiqf4sgrlzrfy16affdz83f564qm6369jsv6jcdxcsl3pmv"; depends=[abind complexplus foreach magrittr matrixcalc minpack_lm nnls plyr pracma readr signal smoother stringr svd tibble tkrplot]; }; sparc = derive2 { name="sparc"; version="0.9.0"; sha256="0jsirrkmvrfxav9sphk8a4n52fg0d1vnk3i8m804i4xl0s7lrg8s"; depends=[]; }; - sparcl = derive2 { name="sparcl"; version="1.0.3"; sha256="1348pi8akx1k6b7cf4bhpm4jqr5v8l5k086c7s6rbi5p6qlpsrvz"; depends=[]; }; + sparcl = derive2 { name="sparcl"; version="1.0.4"; sha256="138krflvfdlx4hlh90mswds51i8aw2vv00gm5lgkfsvxj4w324jg"; depends=[]; }; spareserver = derive2 { name="spareserver"; version="1.0.1"; sha256="094q5i6v4v37hzfdyps8zni394z312r802hl04jw0xzzps922rq4"; depends=[assertthat httr pingr]; }; - spark = derive2 { name="spark"; version="2.0.0"; sha256="062i9qah9zws6p555pk1b42qmd04l8sx22h71skpx76vgb0lsn83"; depends=[clisymbols]; }; spark_sas7bdat = derive2 { name="spark.sas7bdat"; version="1.2"; sha256="1kvzfjhf1q5jzlq5d04s7d96j63vnvqqrh8s03rwkl79h1dhqhhp"; depends=[sparklyr]; }; sparkTable = derive2 { name="sparkTable"; version="1.3.0"; sha256="1fc2nihxfrjpmxm9g9296mz5czd3ydvi1v37g8qgb20j7b73c64h"; depends=[boot Cairo ggplot2 gridExtra pixmap Rglpk RGraphics shiny StatMatch xtable]; }; sparkavro = derive2 { name="sparkavro"; version="0.1.0"; sha256="0jihqvjs7dgyxhyzhsbki7khy7fjniwf9xwlangzqfi4rcan8g7x"; depends=[DBI dplyr sparklyr]; }; + sparkbq = derive2 { name="sparkbq"; version="0.1.0"; sha256="0jcxnivi5zfbixmdywhn1v42lxi085wh7r4c26laclz9j2wvj8mk"; depends=[sparklyr]; }; sparkline = derive2 { name="sparkline"; version="2.0"; sha256="0lrr1lm7603di7x3mf53cp13d9ssjh9gmb43wa6z9yqapis2djm2"; depends=[htmltools htmlwidgets]; }; - sparklyr = derive2 { name="sparklyr"; version="0.8.4"; sha256="1gmzg8464wqygx8r0rh1d67a2h9zpm98y6jwi3ay4adw7bnffhvx"; depends=[assertthat base64enc broom config DBI dbplyr digest dplyr httr jsonlite lazyeval openssl rappdirs readr rlang rprojroot rstudioapi shiny tidyr withr xml2]; }; + sparklyr = derive2 { name="sparklyr"; version="0.9.2"; sha256="06jkxp7y57fs2ij1rzr56lf3a5900l6a0aq24qapyyn6jsvrk00h"; depends=[assertthat base64enc broom config DBI dbplyr digest dplyr forge httr jsonlite lazyeval openssl purrr r2d3 rappdirs rlang rprojroot rstudioapi shiny tibble tidyr withr xml2]; }; sparktex = derive2 { name="sparktex"; version="0.1"; sha256="0r6jnn9fj166pdhnjbsaqmfmnkq0qr1cjprihlnln9jad05mrkjx"; depends=[]; }; sparkwarc = derive2 { name="sparkwarc"; version="0.1.1"; sha256="07b66f12fz19042kj7d9p32j9sy3103zvil36xkf21hm9iyg6xph"; depends=[DBI sparklyr]; }; - sparr = derive2 { name="sparr"; version="2.2-11"; sha256="01li60cybv9kg54zkc9rh4ra6danzbnap9rx59pgfj7zkhs2phmn"; depends=[doParallel foreach misc3d spatstat spatstat_utils]; }; + sparr = derive2 { name="sparr"; version="2.2-13"; sha256="1cn8bzlfairfrxfwwdap0pnaa97rn9h13jz54il8cn9zacnzb8yc"; depends=[doParallel foreach misc3d spatstat spatstat_utils]; }; sparseBC = derive2 { name="sparseBC"; version="1.1"; sha256="1w60n2875n809lbrn0hd4kdmsyfd64aikgzxchza8b59x77l0psy"; depends=[fields glasso]; }; sparseEigen = derive2 { name="sparseEigen"; version="0.1.0"; sha256="0vqcy61rarmp3liz8fr3vs3y40hkb3wfw89b5xsj1byaiap4772s"; depends=[]; }; sparseFLMM = derive2 { name="sparseFLMM"; version="0.2.2"; sha256="12143qij3p8vry9i02i52nj00m1ckkwg2rq99dq00dq43axcpvgw"; depends=[data_table MASS Matrix mgcv refund]; }; @@ -11485,17 +11989,16 @@ in with self; { sparseSVM = derive2 { name="sparseSVM"; version="1.1-6"; sha256="0b0qiikjyyh9qfd4jl69zqnlp7adxq63mwsxvgwvyc0pv5ccg8i0"; depends=[]; }; sparsebn = derive2 { name="sparsebn"; version="0.0.5"; sha256="19315nzj9pz98498amlhas6ii3vwvn3qxz5a6136nh2xfwfg2bhc"; depends=[ccdrAlgorithm discretecdAlgorithm sparsebnUtils]; }; sparsebnUtils = derive2 { name="sparsebnUtils"; version="0.0.6"; sha256="02a75ldvxfn0awn2aaws3fgd4zzk1jjfry4nxjf3y1grdbbz396y"; depends=[Matrix nnet]; }; - sparsediscrim = derive2 { name="sparsediscrim"; version="0.2.4"; sha256="1sa3yssncbpx8yid5wrnxdq7jl3hy5rskyh60v5x592ijcb2mif0"; depends=[bdsmatrix corpcor dplyr ggplot2 mvtnorm]; }; - sparseinv = derive2 { name="sparseinv"; version="0.1.2"; sha256="1lf0lbk8dslasd6m1rq4wzpxa1v427j5i9j0rrw5xjx80z1gc206"; depends=[Matrix spam]; }; + sparseinv = derive2 { name="sparseinv"; version="0.1.3"; sha256="06inzix9m7b5g7c97lyvyl2g7fdr4iz60791hl2w9mah7nd6bfja"; depends=[Matrix Rcpp spam]; }; sparsepca = derive2 { name="sparsepca"; version="0.1.2"; sha256="0wk2nm37p15gb8i4s45izzzdmwywr56kv4g0j3jd5s3slm224vv4"; depends=[rsvd]; }; - sparsepp = derive2 { name="sparsepp"; version="0.2.0"; sha256="0ibadyv7lchxw3y1dspjnbhc4pin4dxwqj9rdrdxfbvlx0i3jgxr"; depends=[]; }; + sparsepp = derive2 { name="sparsepp"; version="1.22"; sha256="0wa1585pkbn3y11apyim4z1ixn300c1yyv9bf2qldb6cjfiv7699"; depends=[]; }; sparsereg = derive2 { name="sparsereg"; version="1.2"; sha256="1ipsang2fppmjx4h5ljgzx3c44z3lggc376ghrqqgmxb5ql8bcp3"; depends=[coda ggplot2 GIGrvg glmnet gridExtra MASS MCMCpack msm Rcpp RcppArmadillo VGAM]; }; sparsestep = derive2 { name="sparsestep"; version="1.0.0"; sha256="0f3wrwiyn990sn3x9r50zgs8cr76nmyisdc7qismgx1nn5yx5z0g"; depends=[Matrix]; }; sparsesvd = derive2 { name="sparsesvd"; version="0.1-4"; sha256="1yf373552wvdnd65r7hfcqa3v29dqn7jd4cn431mqd2acnqjrsam"; depends=[Matrix]; }; sparsevar = derive2 { name="sparsevar"; version="0.0.10"; sha256="069r0kbypmx7pw3z2v9l17qidw3d73rzf5zs6yn1adyvpsddjxi8"; depends=[doParallel flare ggplot2 glmnet Matrix mvtnorm ncvreg picasso reshape2]; }; sparsio = derive2 { name="sparsio"; version="1.0.0"; sha256="12nbydgzl3qlanlsfdy8bvg6rxa439lv0z0vbyqssqwky3mmg5c3"; depends=[Matrix Rcpp]; }; spartan = derive2 { name="spartan"; version="3.0.1"; sha256="15gn72cgbb3hf6grq2hhh2vxd3in0jp62k11qfap6fy9rm4cnqg6"; depends=[e1071 ggplot2 gplots lhs mco mlegp neuralnet plotrix psych randomForest XML]; }; - spass = derive2 { name="spass"; version="1.1"; sha256="1kr2ixyvsm82h2brdm51bzll69632mkj9f88a2ny0pcyqrbggg83"; depends=[geepack MASS multcomp mvtnorm Rcpp]; }; + spass = derive2 { name="spass"; version="1.2"; sha256="0vf7fl68ibv6bwj6v3mh7d0l809kxlcjjgpwqhpgrkqmk1qvzgss"; depends=[geepack MASS multcomp mvtnorm Rcpp]; }; spate = derive2 { name="spate"; version="1.5"; sha256="1hlh4iwx1lrl8r2gag33z2xdv6k4hg86ch4f0jlqnqkhm9hapshf"; depends=[mvtnorm truncnorm]; }; spatgraphs = derive2 { name="spatgraphs"; version="3.2-1"; sha256="0n7f3r4ahv1w5mwx5mnib3g4263kz73rh1fcfk5wb12y52x8n1iz"; depends=[Matrix Rcpp]; }; spatial = derive2 { name="spatial"; version="7.3-11"; sha256="04aw8j533sn63ybyrf4hyhrqm4058vfcb7yhjy07kq92mk94hi32"; depends=[]; }; @@ -11509,12 +12012,14 @@ in with self; { spatialkernel = derive2 { name="spatialkernel"; version="0.4-23"; sha256="0kvhirh7afk2gfy21pa6117yk6kzbaf2dxfkr1ax3b554rnrv4p0"; depends=[spatstat]; }; spatialnbda = derive2 { name="spatialnbda"; version="1.0"; sha256="14mx5jybymasyia752f3vnr5vmswcavbz8bpqr69vlxphw27qkwk"; depends=[mvtnorm SocialNetworks]; }; spatialprobit = derive2 { name="spatialprobit"; version="0.9-11"; sha256="1cpxxylc0pm7h9m83m2cklrh4jni5x79r5m5gibxi6viahwxn9kc"; depends=[Matrix mvtnorm spdep tmvtnorm]; }; + spatialrisk = derive2 { name="spatialrisk"; version="0.4.1"; sha256="0r65y3ch53gbfb0di0svlb2zr39b5v0gbgjh713jgnw44g2g43r3"; depends=[Rcpp RcppProgress]; }; spatialsegregation = derive2 { name="spatialsegregation"; version="2.44"; sha256="02s75q6ylzm6xzr1q23fhps3svlb0ix86dzgr23wf42369gs7h0g"; depends=[spatstat]; }; spatialwarnings = derive2 { name="spatialwarnings"; version="1.2"; sha256="1kpyx1jl23ml4gpbwz5p4srmdq58634dxznw1g6f618wml13ab3s"; depends=[ggplot2 plyr Rcpp RcppArmadillo reshape2 tidyr VGAM]; }; - spatstat = derive2 { name="spatstat"; version="1.56-0"; sha256="0gigb7vpgpwg4hrwsl9wncknrl2c7i4iv9aab2qskbc5z7xxjs4v"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; }; - spatstat_data = derive2 { name="spatstat.data"; version="1.3-1"; sha256="13wb9c1r7g2lrrjv7a2qmkyz27yjmcasl9qrzgk09akqgikkbbf3"; depends=[spatstat_utils]; }; + spatsoc = derive2 { name="spatsoc"; version="0.1.4"; sha256="0h41ql1ll1ypmwfjczk3pls78z75xz8qakl61xrynqmw0y7l9fys"; depends=[adehabitatHR data_table igraph rgeos sp]; }; + spatstat = derive2 { name="spatstat"; version="1.56-1"; sha256="0q3srg3rdnvwz52lqpamhhj97nkxkl55kqk2dw1707iic14dv0w6"; depends=[abind deldir goftest Matrix mgcv nlme polyclip rpart spatstat_data spatstat_utils tensor]; }; + spatstat_data = derive2 { name="spatstat.data"; version="1.4-0"; sha256="137cf9x6qcp7lw3rpjqizsy73z99yihff8gr434wlz7b5fwmn7hj"; depends=[spatstat_utils]; }; spatstat_local = derive2 { name="spatstat.local"; version="3.5-7"; sha256="1sdcx4qxv0z5q97rljn34mssbs4w6qbqxhn71xmkns01xypl1wr2"; depends=[spatstat spatstat_utils tensor]; }; - spatstat_utils = derive2 { name="spatstat.utils"; version="1.8-2"; sha256="1wjvwhhyqh8f4cm3xw7vhrnj5qr9vlwkcxkj1l6s4sbjbcli2y2p"; depends=[]; }; + spatstat_utils = derive2 { name="spatstat.utils"; version="1.10-0"; sha256="1wmakkc9b8vzyjdjwgr15hf676lrx11kxgmg3mbl0r9i72lflnvs"; depends=[]; }; spatsurv = derive2 { name="spatsurv"; version="1.2"; sha256="0acg6n5qs3z9c7y2n3amla61dm3z1p16njkx0h52dlgdbj5v1nhn"; depends=[fields geostatsp iterators lubridate Matrix OpenStreetMap RandomFields raster RColorBrewer rgeos rgl sp spatstat stringr survival]; }; spbabel = derive2 { name="spbabel"; version="0.4.8"; sha256="1f0lradf7a3fjkdhbviw24awpqj1pzw1wfvigrqhnmf0jjw3nng3"; depends=[dplyr sp tibble]; }; spc = derive2 { name="spc"; version="0.6.0"; sha256="118r2yjfmzm0bi3ccx9pzi56vw2kbjz0pbxrjqdks0075fk7ij0q"; depends=[]; }; @@ -11524,7 +12029,7 @@ in with self; { spcov = derive2 { name="spcov"; version="1.01"; sha256="1brmy64wbk56bwz9va7mc86a0ajbfy09qpjafyq2jv7gm7a35ph5"; depends=[]; }; spcr = derive2 { name="spcr"; version="2.0"; sha256="1n0lva9brpzxysw6p7l88cj8d46jng2zd7zvr5brqldzd3yl63l9"; depends=[]; }; spd = derive2 { name="spd"; version="2.0-1"; sha256="00zxh4ri47b61jkcjf5idl9hhlfld6rhczsnhmjsax59884f2i8m"; depends=[KernSmooth]; }; - spdep = derive2 { name="spdep"; version="0.7-7"; sha256="0wrlximy4w5y5aszy3pacmf3ag224chl12q4rj4r7ky6zw2sn1ns"; depends=[boot coda deldir expm gmodels LearnBayes MASS Matrix nlme sp spData]; }; + spdep = derive2 { name="spdep"; version="0.7-9"; sha256="17sx6zkrnmbhhqqjb9qgp9mmykszqqr2hw3npk8q74k567mgxgcm"; depends=[boot coda deldir expm gmodels LearnBayes MASS Matrix nlme sp spData]; }; spdownscale = derive2 { name="spdownscale"; version="0.1.0"; sha256="0pl560km9629iwy13h7359ab7ixzs09hg986kvk0xbnc348srb86"; depends=[]; }; spdplyr = derive2 { name="spdplyr"; version="0.1.3"; sha256="1f34yzj9z4f1dj7pqaayk0mvabzwa6kc3kwi1pmpikl1afgsyv25"; depends=[dplyr lazyeval rlang sp spbabel tibble]; }; spduration = derive2 { name="spduration"; version="0.17.1"; sha256="1hsz4hcw85f1rj2pd8ppzsd1r8fh4yf6axc11yf2hd287ghzzxzy"; depends=[corpcor forecast MASS plyr Rcpp RcppArmadillo separationplot xtable]; }; @@ -11541,12 +12046,12 @@ in with self; { spectral_methods = derive2 { name="spectral.methods"; version="0.7.2.133"; sha256="0k8kpk94d2qzqdk3fnf6h9jmwdyp8h3klr0ilm5siwq5wkcz339l"; depends=[abind DistributionUtils foreach JBTools ncdf_tools nnet raster RColorBrewer RNetCDF Rssa]; }; spectralAnalysis = derive2 { name="spectralAnalysis"; version="3.12.0"; sha256="0mz01hx86qi65k6vzz9k1j9q7gi10dh14cqvrlfy93f3kmi52q0x"; depends=[baseline BiocGenerics data_table ggplot2 hNMF jsonlite magrittr NMF nnls plotly plyr RColorBrewer signal viridis]; }; spectralGP = derive2 { name="spectralGP"; version="1.3.3"; sha256="1jf09nsil4r90vdj7n1k6ma9dzzx3bwv0fa7svil9pxrd2zlbkbs"; depends=[]; }; - spectrolab = derive2 { name="spectrolab"; version="0.0.6"; sha256="0pzisyi64f9wm79qxw22rmgm6lsgn6jqavxh688yrm94nnn1qv5h"; depends=[devtools prospectr RColorBrewer shiny shinyjs]; }; + spectrolab = derive2 { name="spectrolab"; version="0.0.8"; sha256="1hjvi9na94f7n7yr64p0bvh0mzckwmfh36d6zxisrxr08zxwyxzz"; depends=[devtools prospectr RColorBrewer shiny shinyjs usethis]; }; speedglm = derive2 { name="speedglm"; version="0.3-2"; sha256="1b25zimk0z7ad62yacqdg0zk0qs0jja4i918ym942xfw4j1z3jjz"; depends=[MASS Matrix]; }; - spef = derive2 { name="spef"; version="1.0-7"; sha256="006qp0qsqrlbbbv4b86ikqz1ig0php0cahqz4c9n3js1kxwsdi7d"; depends=[BB ggplot2 nleqslv plyr sm SQUAREM survival]; }; + spef = derive2 { name="spef"; version="1.0.8"; sha256="1c4hpm19zqh869z8qbixkfbidnygc3fy91d0m2l4bp2s6bq1wdnz"; depends=[BB ggplot2 nleqslv plyr sm SQUAREM survival]; }; speff2trial = derive2 { name="speff2trial"; version="1.0.4"; sha256="0dj5mh2sdp6j4ijgv14hjr39rasab8g83lx1d9y50av11yhbf2pw"; depends=[leaps survival]; }; spellcheckr = derive2 { name="spellcheckr"; version="0.1.2"; sha256="09snc1ymzr4njnr3w502b84dqwjjd414higjxqi48jvh27br5k1l"; depends=[data_table dplyr stringr]; }; - spelling = derive2 { name="spelling"; version="1.1"; sha256="10zhzbpyjw5lkg4iyjwgs5xp2c8bgwyzjg146fcml6cjs6xhl8ni"; depends=[commonmark hunspell knitr xml2]; }; + spelling = derive2 { name="spelling"; version="1.2"; sha256="1gdxxwz0n2z05d8xqk0kcvv2zffa810hda57i23zsysbrpn751s4"; depends=[commonmark hunspell knitr xml2]; }; spemd = derive2 { name="spemd"; version="0.1-1"; sha256="1aw8dg2fm8qd95bgim2kjwp7ax4b2g78521llsxv7fhdj9hl7rgw"; depends=[MBA sp spdep]; }; sperich = derive2 { name="sperich"; version="1.5-7"; sha256="1apgq5nsl6nw674dy7bc7r7z962wcmqsia5n67a8n6c5lcgcif3f"; depends=[foreach rgdal SDMTools sp]; }; sperrorest = derive2 { name="sperrorest"; version="2.1.5"; sha256="126vwk3bxs27gblakc5nplj0k90a21gks9d0kbyanlxc2ihsy243"; depends=[doFuture foreach future future_apply gdata glue magrittr pbapply pbmcapply purrr ROCR rpart stringr]; }; @@ -11563,35 +12068,37 @@ in with self; { spider = derive2 { name="spider"; version="1.5.0"; sha256="1y034v42jxjl3vj87iz5kaizq7fwppmn56z7yyvrrmk5ps4nqr1j"; depends=[ape pegas]; }; spiderbar = derive2 { name="spiderbar"; version="0.2.1"; sha256="1mm9g58riyjxpfwjj28shlw9zlycsgcxl6xw8im0gm815v2plyhv"; depends=[Rcpp]; }; spiders = derive2 { name="spiders"; version="1.2"; sha256="1qklm178bgkgpvrjf024jphsdh9can8300sf0702l4h0rk2daqbq"; depends=[plyr]; }; - spikeSlabGAM = derive2 { name="spikeSlabGAM"; version="1.1-11"; sha256="1f16jvdj6kbiiypnbbj10nj7l88kkrxasrribqpjv7ai62dlximn"; depends=[akima cluster coda ggplot2 gridExtra MASS MCMCpack mvtnorm R2WinBUGS reshape scales]; }; + spikeSlabGAM = derive2 { name="spikeSlabGAM"; version="1.1-14"; sha256="1ha2ngs5jkrcd3ay26vynrd31fqf9pva5r0p954dyfbpbinizxgf"; depends=[akima cluster coda ggplot2 gridExtra MASS MCMCpack mvtnorm R2WinBUGS reshape scales]; }; spikes = derive2 { name="spikes"; version="1.1"; sha256="080sna0sgii61kai5sirs6cijnvk1012djwfw705di9y2lvk1hqk"; depends=[emdbook]; }; spikeslab = derive2 { name="spikeslab"; version="1.1.5"; sha256="0dzkipbrpwki6fyk4hqlql3yhadwmclgbrx00bxahrmlaz1vjzh2"; depends=[lars randomForest]; }; - spind = derive2 { name="spind"; version="2.1.3"; sha256="173jpyq13vdhcwbxwx188fp7jg8l67yh6kxlai13z8lqnlpl1xqh"; depends=[gee geepack ggplot2 lattice MASS RColorBrewer rje splancs stringr waveslim]; }; + spind = derive2 { name="spind"; version="2.2.0"; sha256="1qswvj8hcjds3mjffzlxq87g79gijsk3mw26lfr81vyf5zmwm4w4"; depends=[gee geepack ggplot2 lattice MASS RColorBrewer rje rlang splancs stringr waveslim]; }; spinyReg = derive2 { name="spinyReg"; version="0.1-0"; sha256="0kbg7rncrrl5xdsaw9vj909x97mfp77mjnvghczplmnwmmanyn72"; depends=[]; }; splancs = derive2 { name="splancs"; version="2.01-40"; sha256="0qs3lwyllrkahnvqbm8bzrf03bm9zk4s7p1n19s638y4xf0l6x3r"; depends=[sp]; }; splashr = derive2 { name="splashr"; version="0.4.1"; sha256="1gydnl6qdkqxvgzy3j6n8y4nan4wz6p7wybcgnm5p37n7q6m2rhk"; depends=[curl docker formatR HARtools httr jsonlite lubridate magick openssl purrr scales stringi xml2]; }; splines2 = derive2 { name="splines2"; version="0.2.8"; sha256="0ygzqq0swhcss5v8bn7qg98fpvp3wibbnbzkbpw4nvfd8bg51m1v"; depends=[]; }; + splinetree = derive2 { name="splinetree"; version="0.1.0"; sha256="14bqdad538nm4vps43gpyq3c9lv5hl28064mq9vyldgvvbdr40w2"; depends=[ggplot2 mclust mosaic nlme rpart treeClust]; }; splitFeas = derive2 { name="splitFeas"; version="0.1.0"; sha256="1cfiis32h5kkp8r1mndmj4xss9gw96vdzk7q68q3jhbwqiaxp9rp"; depends=[corpcor matrixStats]; }; splitfngr = derive2 { name="splitfngr"; version="0.1.1"; sha256="0gz65acnkil9xjspl2kzpzyhj7lslga9g3p0k79xh25ia6qal5ws"; depends=[lbfgs]; }; splithalf = derive2 { name="splithalf"; version="0.3.1"; sha256="01ip3brnlyxlxr1hmnmc2w6jg4vm5gjk8fwavclmv7m7hr2bb4xh"; depends=[dplyr tidyr]; }; - splitstackshape = derive2 { name="splitstackshape"; version="1.4.4"; sha256="0vhgb4pysp7hbph7kq8b38m4gqhal40j4p7gij2wrc2rajspzhkq"; depends=[data_table]; }; - splm = derive2 { name="splm"; version="1.4-10"; sha256="0zz28mfs84nqyvl1l0ba7yrhgcxxzw1v0542jc39h4pr537yz1nc"; depends=[bdsmatrix ibdreg MASS Matrix maxLik nlme plm spam spdep]; }; + splitstackshape = derive2 { name="splitstackshape"; version="1.4.6"; sha256="03w6h64ga4zqilffdway4l38l5cbman4yrspkzhbigds12aqz25r"; depends=[data_table]; }; + splm = derive2 { name="splm"; version="1.4-11"; sha256="15app94mxs6xlmqqhpa0q041skc4n4l2wfi6pmmhwinrgcqgncln"; depends=[bdsmatrix ibdreg MASS Matrix maxLik nlme plm spam spdep]; }; splot = derive2 { name="splot"; version="0.4.0"; sha256="1g6n10pjjfhxa8sycr1iamwfdhjhp6g2zn5dkynfhg9j7v0dxnyf"; depends=[]; }; spls = derive2 { name="spls"; version="2.2-2"; sha256="11xp6wnxizc8g91ci9fd7lbjc8pin84c9ak8lr8yg2jyd2l351j9"; depends=[MASS nnet pls]; }; splus2R = derive2 { name="splus2R"; version="1.2-2"; sha256="0xrbj8vxy0pc6hl7m8abv71d3hjw47cl51s7j7priadyqczkq6sz"; depends=[]; }; splusTimeDate = derive2 { name="splusTimeDate"; version="2.5.0-141"; sha256="1z29djg6az8dl47w0b9fpfwhng74xnbh5bq1asv55i8kdm1a4v1s"; depends=[]; }; splusTimeSeries = derive2 { name="splusTimeSeries"; version="1.5.0-75"; sha256="14bg0yzwk3v0b1qrlfaxv48dpk380ha6wb2w4k02c9vmb51ysmw0"; depends=[splusTimeDate]; }; - spm = derive2 { name="spm"; version="1.1.0"; sha256="0xx1g6ir0sanj2p6xgsdghymx1iy2bzsany2j87q49y5hah7349j"; depends=[biomod2 gbm gstat psy randomForest ranger sp]; }; - spm12r = derive2 { name="spm12r"; version="2.7.4"; sha256="0v0zmsbzk6446n1yipz3w99n0n4yya6idff3gfyj7fgq10pcalgz"; depends=[git2r matlabr neurobase oro_nifti R_utils]; }; - spmoran = derive2 { name="spmoran"; version="0.1.4"; sha256="0b58c2v57qj14icd577mpsgxwa84lyib4v9qxcbl26im4dhikmfm"; depends=[doParallel fields foreach ggplot2 Matrix vegan]; }; + spm = derive2 { name="spm"; version="1.1.1"; sha256="0yz1fmh25yv5rdh5ny9xm3k177650ll03bp6pd1d2p8dgqyimv15"; depends=[biomod2 gbm gstat psy randomForest ranger sp]; }; + spm12r = derive2 { name="spm12r"; version="2.8.0"; sha256="1f18f4z017j98kihixjsi9lngxp4fz2bnslfb0xqjzy7wq8d3y6x"; depends=[git2r matlabr neurobase oro_nifti R_utils]; }; + spmoran = derive2 { name="spmoran"; version="0.1.6"; sha256="15cz3ivs20yspdz36279gjcc4w4lr5anb5dyyl96lvz6gjdacb4g"; depends=[doParallel fields foreach ggplot2 Matrix rARPACK spdep vegan]; }; spnet = derive2 { name="spnet"; version="0.9.1-0"; sha256="1fy0fpgz2k985brfqyza1l49y0w2j9z308n542pgmkzqsnsdscpw"; depends=[shape sp]; }; spnn = derive2 { name="spnn"; version="1.1"; sha256="0i77lpxrfa1jxi9znlmn5knmcjpf17q4hf8999b1x8lhqlhiizc1"; depends=[MASS]; }; spocc = derive2 { name="spocc"; version="0.8.0"; sha256="00wm3fkwzcma847kfxliap66sr0i6vfr0kpkvcdjidgk3z51y3bw"; depends=[crul data_table jsonlite lubridate rbison rebird rgbif ridigbio rvertnet tibble whisker wicket]; }; spongecake = derive2 { name="spongecake"; version="0.1.2"; sha256="13fxizbfjvqkhkmxk5bwv2fj2xyjkbxrxicpdgwpg0wsk4dhj3s8"; depends=[ggplot2 jpeg magrittr plyr]; }; sporm = derive2 { name="sporm"; version="1.1"; sha256="07sxz62h4jb7xlqg08sj4wpx121n9jfk65196mnxdvb36lqmb4hp"; depends=[]; }; - spotGUI = derive2 { name="spotGUI"; version="0.2.0"; sha256="05x8i1295qjdzyr1ri5c85lgcmj3sahamdwgzknf87dsc9r4hjcz"; depends=[gridExtra httpuv plotly rclipboard rhandsontable shiny shinyBS shinydashboard shinyjs smoof SPOT XML]; }; + sport = derive2 { name="sport"; version="0.1.1"; sha256="0sqlnapmfdmpsxs5gapcw8k4dbc5jfc48qa6lirvfqz85yg2xzxs"; depends=[data_table ggplot2 Rcpp]; }; + spotGUI = derive2 { name="spotGUI"; version="0.2.1"; sha256="1z664ricdsn8c29ks6hslm89f0qq6ls94pz4k256427cs95pk3ay"; depends=[gridExtra httpuv plotly rclipboard rhandsontable shiny shinyBS shinydashboard shinyjs smoof SPOT XML]; }; spotifyr = derive2 { name="spotifyr"; version="1.0.0"; sha256="1f7sv6qc8bim8vkcsma96zdzd1ci73dpag2dp27mqjcbh716xfy0"; depends=[dplyr httr lubridate purrr tidyr]; }; - spp = derive2 { name="spp"; version="1.15.4"; sha256="0gjg0g30y9w445mimrd29s44ryla1bmh1mdwj4hb85s1yi1l4h25"; depends=[BH caTools Rcpp Rsamtools]; }; + spp = derive2 { name="spp"; version="1.15.5"; sha256="097rb34kk20varsdf0d9gf3k2hxbislsirzgjm61ksrzmj96fj0w"; depends=[BH caTools Rcpp Rsamtools]; }; sppmix = derive2 { name="sppmix"; version="1.0.2"; sha256="1924lrxjlijlbvjbkkwb3pfa4klg49ph6hz66b7kyy1371wa2b9y"; depends=[fields ggplot2 mvtnorm Rcpp RcppArmadillo rgl spatstat]; }; spray = derive2 { name="spray"; version="1.0-3"; sha256="0zy2dwzk33cwch0pdhhsyiy169z39iij3zvvjg81gxa29pq0h1ab"; depends=[magic partitions Rcpp]; }; sprex = derive2 { name="sprex"; version="1.4.1"; sha256="14idml4mipd4wyza7hqf49ww4dparmwaps35hxm8jg5h0w1pgh7j"; depends=[swfscMisc]; }; @@ -11603,7 +12110,7 @@ in with self; { spsi = derive2 { name="spsi"; version="0.1"; sha256="0q995hdp7knic6nca0kf5yzkvv8rsskisbzpkh9pijxjmp1wnjrx"; depends=[plot3D]; }; spsurvey = derive2 { name="spsurvey"; version="3.4"; sha256="0bi2d5jfqbnhhfhs79wid7ksg77vh8r5r8q2g4zbzpjgc9c67lj4"; depends=[deldir foreign Hmisc MASS rgeos sp]; }; spt = derive2 { name="spt"; version="2.5.1"; sha256="04j38d2b35p4798znnc49vqrg8r8bygwi07vybfj3nzimlp2mkrn"; depends=[]; }; - sptemExp = derive2 { name="sptemExp"; version="0.1.1"; sha256="0a4y355j24sll8jmm17lh4j13k21b3nlalsxzpzx2gp5xw1x7jr6"; depends=[automap BayesX BayesXsrc bcv deldir doParallel foreach limSolve ncdf4 plyr R2BayesX raster Rcpp RcppEigen rgdal rgeos sp SpatioTemporal]; }; + sptemExp = derive2 { name="sptemExp"; version="0.1.3"; sha256="1j5c63mywv92c2zyqaa1rp22s5dmsj0as1f3q93455wjvvr42sz6"; depends=[automap BayesX BayesXsrc bcv deldir doParallel foreach limSolve ncdf4 plyr R2BayesX raster Rcpp RcppEigen rgdal rgeos sp SpatioTemporal]; }; sptm = derive2 { name="sptm"; version="17.12-7"; sha256="1l5in0jkqg44rr2id3h25jrfbn7x855p31z338hnmdpfwkpm2b1a"; depends=[kyotil survey survival]; }; spuRs = derive2 { name="spuRs"; version="2.0.2"; sha256="00c0hnyrcbkbj269czxbfgmgi88y0vxzm79sxclllkzr9rdd1p53"; depends=[lattice MASS]; }; spup = derive2 { name="spup"; version="1.3-1"; sha256="0xq9z9iy3bwqhzq783qydgmczxvh7knkk9vdvwnbpbk0rbjgq3kn"; depends=[gstat magrittr mvtnorm purrr raster whisker]; }; @@ -11614,7 +12121,7 @@ in with self; { squash = derive2 { name="squash"; version="1.0.8"; sha256="1x1rw0ny2kas0x8y5vv9czyqmwml7s5d2c8a33vqap0x8q52r4z6"; depends=[]; }; squid = derive2 { name="squid"; version="0.1.1"; sha256="0qv9lazgiqazhq096ybmllalm2l2h794ry4p1r93c10msxg37sdp"; depends=[arm data_table ggplot2 lme4 MASS shiny]; }; sra = derive2 { name="sra"; version="0.1.1"; sha256="03nqjcydl58ld0wq1f9f5p666qnvdfxb5vhd584sdilw1b730ykd"; depends=[]; }; - srp = derive2 { name="srp"; version="1.0.0"; sha256="10mpyy8q419dw0zd96l0z8lkxpcyn1l5fvnyvr3n0lyl6jmf91sy"; depends=[fda mgcv]; }; + srp = derive2 { name="srp"; version="1.1.0"; sha256="1655p3f7y50qjprm03gp5vffgnkin0c7ahzcrj6s8qfrd6gh2vsp"; depends=[fda mgcv]; }; srvyr = derive2 { name="srvyr"; version="0.3.3"; sha256="0xarb92xhsb3c6g45lqq9kgp5yy0y9psi7yrn7yvv1a130lwzs40"; depends=[dplyr magrittr rlang survey tibble]; }; ss3sim = derive2 { name="ss3sim"; version="0.9.5"; sha256="0rdb49bfxvyh0jrqycrv1hxvh7y4kvw81jccjg5ma734x44q0vm5"; depends=[bbmle dplyr foreach ggplot2 gtools lubridate magrittr plyr r4ss]; }; ssa = derive2 { name="ssa"; version="1.2.1"; sha256="10x58c57pa9x6svm4h4xrss72ikin9lpf3ihjwmnkgnaicvsd0bx"; depends=[iterators]; }; @@ -11622,19 +12129,19 @@ in with self; { ssc = derive2 { name="ssc"; version="2.0.0"; sha256="0w7c0blqny7dyjh1a6l9lr7nysgpmasfqbf7wf368rwmv59pk0b3"; depends=[proxy]; }; sscor = derive2 { name="sscor"; version="0.2"; sha256="1kcrr90cxg6k4qkc3pidhkwf4dsnlgbxczxigr2afwpd9cpf104c"; depends=[mvtnorm pcaPP robustbase]; }; ssd = derive2 { name="ssd"; version="0.3"; sha256="1z61n9m6vn0ijawyz924ak0zfl9z13jsb4k4575b7c424ci2p6gy"; depends=[]; }; + ssdtools = derive2 { name="ssdtools"; version="0.0.2"; sha256="193b7qq57vzhv45bvnqz0vh8z89zm83gq8c6ayadw8sbxcras4rs"; depends=[actuar checkr dplyr FAdist fitdistrplus ggplot2 magrittr plyr pryr purrr scales tibble VGAM]; }; ssfa = derive2 { name="ssfa"; version="1.1"; sha256="0fkyalhsjmx2sf8xxkppf4vd272n99nbkxh1scidrsgp4jk6z7fx"; depends=[Matrix maxLik sp spdep]; }; ssfit = derive2 { name="ssfit"; version="1.1"; sha256="1fais0msi2ppgfp0vbx3qri7s9zs51i7n90w36xkwwac4f46bq5y"; depends=[survey]; }; - ssgraph = derive2 { name="ssgraph"; version="1.4"; sha256="1k1ignb6gsjwwsqlkxjlr3pm6avzf9z3aj069f6y0hglz3g74qv0"; depends=[BDgraph igraph Matrix]; }; - ssh = derive2 { name="ssh"; version="0.2"; sha256="12v5yfkaqlbixifw6sfdbjw88fc604sryg4ygml7k383nr8rpklf"; depends=[getPass]; }; + ssgraph = derive2 { name="ssgraph"; version="1.5"; sha256="0d8zfk6q3q2krjyhkpb7h08cmgx7hsw4q7qhpzsbb3pjma0pkad7"; depends=[BDgraph igraph Matrix]; }; + ssh = derive2 { name="ssh"; version="0.3"; sha256="0javjjl8bay18hg69fwwkmkzfin42yqlcafw0g6w9wslbm5a7fxh"; depends=[getPass]; }; ssh_utils = derive2 { name="ssh.utils"; version="1.0"; sha256="08313zzzgcyvzkrkq0w0yf748ya1a9shx5xnan5891v0lah9v0b1"; depends=[stringr]; }; ssize_fdr = derive2 { name="ssize.fdr"; version="1.2"; sha256="0y723lwsnmk3rxbhlsrny9hiy07a5p255ygy9qkj6mri64gk1hby"; depends=[]; }; ssizeRNA = derive2 { name="ssizeRNA"; version="1.2.9"; sha256="1916r0hmhpfa0p1s8myqk8g4i8fgjqkm4wvpb4nf3sl69kfdva95"; depends=[Biobase edgeR limma MASS qvalue ssize_fdr]; }; - sskm = derive2 { name="sskm"; version="1.0.0"; sha256="1qji34v66qj4k9axy5i2lf3j5zps8sjhwk3h3mqfln3pi9z6gmv8"; depends=[fpc sparcl]; }; ssmn = derive2 { name="ssmn"; version="1.1"; sha256="1rab9yjb05g5rphqlhwvdwmsyqlv1f4m0rqxfv8c5pbh170nbwbc"; depends=[mnormt moments sn truncdist]; }; ssmrob = derive2 { name="ssmrob"; version="0.4"; sha256="1inndspir7571f54kalbj0h599v9k6dxdmp0n1l5r3a62vn45hd3"; depends=[MASS mvtnorm robustbase sampleSelection]; }; ssmsn = derive2 { name="ssmsn"; version="0.2.0"; sha256="0fzqdkqhj5hh8pzcwh7i0rglgdq22a5mriyis8r1vhlkdc7n5m39"; depends=[MCMCpack]; }; sspline = derive2 { name="sspline"; version="0.1-6"; sha256="0d6ms8szyn39c7v0397d5ar2hrl8v1l2b7m8hlj37hgp70b9s55h"; depends=[]; }; - sspse = derive2 { name="sspse"; version="0.5-5"; sha256="07656miqrv9g5nn3ahyfj7wb010cwkr3qjhysbsih0p43dwczq0y"; depends=[coda]; }; + sspse = derive2 { name="sspse"; version="0.6"; sha256="1296893wgg0s6z5bv9a3k39gbxazvljl4dxiv4ma1s73nhz0xan9"; depends=[coda RDS scam]; }; ssrm_logmer = derive2 { name="ssrm.logmer"; version="0.1"; sha256="1i9rrsixl3swd04w1gf9gf1r2wb9nkvwhc8ld4bx4zxzm1031f67"; depends=[sfsmisc statmod]; }; sss = derive2 { name="sss"; version="0.1-0"; sha256="1qg56g60h8c52l8lpxihxsdgnqkxiag1mzh3p388r9hhff7g3g0k"; depends=[assertthat xml2]; }; sssc = derive2 { name="sssc"; version="1.0.0"; sha256="00m5zfd3jnbxa8x76v4pfyl4qdfq90n8rqx4hngany0ka1z5g7m6"; depends=[changepoint e1071 ggplot2 VGAM]; }; @@ -11643,17 +12150,18 @@ in with self; { ssym = derive2 { name="ssym"; version="1.5.7"; sha256="0l5d921vlhd4qwddllrgcxpq3bhivvy5ikh3ixdy3s140rzpgwrv"; depends=[Formula GIGrvg normalp numDeriv sandwich survival]; }; st = derive2 { name="st"; version="1.2.5"; sha256="0dnyfjcz37gjjv87nrabb11gw2dlkqhq3mrxdpkzahx0w0g0q0pb"; depends=[corpcor fdrtool sda]; }; stR = derive2 { name="stR"; version="0.4"; sha256="120k8k1l8cfy8x746808jym7lnaplgh4s3lycgyq2wia2c35r0rc"; depends=[foreach forecast Matrix quantreg rgl SparseM]; }; - stUPscales = derive2 { name="stUPscales"; version="1.0.3.1"; sha256="0qs8lj50jrkyh4dmiinpg6dxfs68x6zlp0knr2ckpgik3v51r52z"; depends=[data_table doParallel EmiStatR foreach ggplot2 hydroGOF lattice lmom mAr moments msm xts zoo]; }; + stUPscales = derive2 { name="stUPscales"; version="1.0.3.3"; sha256="1hby7z9j23pd0z2hvyvprjl4gglb2rg9rh5fpkqy26x24nwkgk3h"; depends=[data_table doParallel EmiStatR foreach ggplot2 hydroGOF lattice lmom mAr moments msm xts zoo]; }; staRdom = derive2 { name="staRdom"; version="1.0.8"; sha256="15khv32jbhjq73kr60al39ppf4pps7n48220jhp7sc04fcbi8fwd"; depends=[data_table doParallel dplyr drc eemR foreach GGally ggplot2 matrixStats multiway plotly pracma readr stringr tibble tidyr zoo]; }; staTools = derive2 { name="staTools"; version="0.1.0"; sha256="1ksr0sjkhlwh0fkwcxjcxzbyxs1g78m4spkhrmgdpfzmk5zskqf9"; depends=[magicaxis Rcpp VGAM]; }; - stability = derive2 { name="stability"; version="0.2.0"; sha256="154dp26aghznibnp9h7j86hi30caylvyxp87jkf2p7cb4l3qn5r4"; depends=[dplyr ggfortify ggplot2 lme4 magrittr matrixStats reshape2 rlang scales tibble tidyr]; }; + stability = derive2 { name="stability"; version="0.5.0"; sha256="0mz7ikfhpfbdcp72klq7fi4zfmx2w18gz46yhwywcc4dyi277m11"; depends=[dplyr ggfortify ggplot2 lme4 magrittr matrixStats reshape2 rlang scales tibble tidyr]; }; stable = derive2 { name="stable"; version="1.1.3"; sha256="1fbyba91qi536mbb7hs6bvi1zgwdjvnv6ih7ykyyhkxk85cmfmq3"; depends=[rmutil stabledist]; }; stabledist = derive2 { name="stabledist"; version="0.7-1"; sha256="0scar396wiq6wkbkvwp4qrxqc1m075y56p37i6iry5rw796p1i86"; depends=[]; }; + stablelearner = derive2 { name="stablelearner"; version="0.1-1"; sha256="19mvk6dzg8zg0nj1q4sraqg6h3zj8xvnfc0jql1xiqas9wcypx7d"; depends=[e1071 MASS partykit]; }; stablespec = derive2 { name="stablespec"; version="0.3.0"; sha256="0m143cq0baj2lyakhr31mqk2lg78jzpdlpv2bhwz6bzzip7mqi22"; depends=[foreach ggm graph matrixcalc nsga2R polycor Rgraphviz sem]; }; stabs = derive2 { name="stabs"; version="0.6-3"; sha256="17sa0sjxf6h7gx1ga1pxhv17yrz3qisaivbf5cbc3asvshhswqg9"; depends=[]; }; stackoverflow = derive2 { name="stackoverflow"; version="0.1.2"; sha256="1psw96iscgsx11drmcnh0yjg2jjcaa4akmywh337i6gbgam8kj61"; depends=[]; }; - stacomiR = derive2 { name="stacomiR"; version="0.5.3.1"; sha256="1d05k8s8239d615vqjs6r6rx7r3vqc5gmms8iqds6lhr59bxv83g"; depends=[dplyr ggplot2 gWidgets gWidgetsRGtk2 Hmisc intervals lattice lubridate magrittr mgcv RColorBrewer reshape2 RGtk2 RODBC RPostgreSQL sqldf stacomirtools stringr xtable]; }; - stacomirtools = derive2 { name="stacomirtools"; version="0.5.2"; sha256="1a33yy594699b05lb32zwx6yhmvxzwly6vvf8xzqg6lac64p26r5"; depends=[RODBC xtable]; }; + stacomiR = derive2 { name="stacomiR"; version="0.5.4.0"; sha256="0spkv1xx6mh2v41pba0gasymsb80xvqi42a3v0qqvd0ib8sgj2k7"; depends=[dplyr ggplot2 gWidgets gWidgetsRGtk2 Hmisc intervals lattice lubridate magrittr mgcv RColorBrewer reshape2 RGtk2 RODBC RPostgreSQL sqldf stacomirtools stringr xtable]; }; + stacomirtools = derive2 { name="stacomirtools"; version="0.5.3"; sha256="00zpsfrw0gcjbjr3xdxf2wacrr1zfw6wq7a2ycq32pbh2smbkz4k"; depends=[RODBC xtable]; }; stagePop = derive2 { name="stagePop"; version="1.1-1"; sha256="0949r5ibl3sb10sr5xsswxap3wd824riglrylk7fx43ynsv5hzpy"; depends=[deSolve PBSddesolve]; }; stam = derive2 { name="stam"; version="0.0-1"; sha256="1x1j45fir64kffny0nssb2hwn4rcp8gd2cjv6fw4yy0l4d0xi5iv"; depends=[np sp]; }; stampr = derive2 { name="stampr"; version="0.2"; sha256="10mc71kgnw5712q2gvzd4bmjaw1879r7s599hfsjap21idqb2k2m"; depends=[deldir maptools raster rgdal rgeos sp spdep]; }; @@ -11663,21 +12171,22 @@ in with self; { stargazer = derive2 { name="stargazer"; version="5.2.2"; sha256="1pij76r60hkjlvxw6zw1v7gkib81smiqmjq7mwszn6xclq9lmsvh"; depends=[]; }; starma = derive2 { name="starma"; version="1.3"; sha256="07r0kyabhgbm2v39fcrw0qhxcxj9a9cb45g9chzcnn9qmvramcwx"; depends=[ggplot2 Rcpp RcppArmadillo scales]; }; starmie = derive2 { name="starmie"; version="0.1.2"; sha256="06cvl8gk78c55kcf4rd27d4gfzh2lcg7ldynvx4hclvbw7ak9zdq"; depends=[combinat data_table ggdendro ggplot2 ggrepel gridExtra iterpc label_switching MCL MCMCpack proxy purrr readr stringr tidyr]; }; + stars = derive2 { name="stars"; version="0.2-0"; sha256="0fsl88bg0mxqvijyj7q7a05p1r48lwamhz9vwdj7icv8alz0higr"; depends=[abind classInt ncdf4 ncmeta rlang sf units]; }; startR = derive2 { name="startR"; version="0.0.1"; sha256="12y57n3yip5rz4rln41896a15zv5b4c67k164282fh1p6ww9gr3r"; depends=[abind bigmemory future]; }; - startup = derive2 { name="startup"; version="0.10.0"; sha256="1j9vb1008sg6wwbz8ilxqnqzy7b18cscxiyaijszzx4ygxmcq39j"; depends=[]; }; - startupmsg = derive2 { name="startupmsg"; version="0.9.4"; sha256="1r9dqrfznsrj7s11m56hkzgfnw3qcgzh07pqipl007zr2av9xwqw"; depends=[]; }; + startup = derive2 { name="startup"; version="0.11.0"; sha256="1ibplrnzqv0z7mm8c3py5prlp4wg95xhk1jxv5i3z1w9ndqimbfv"; depends=[]; }; + startupmsg = derive2 { name="startupmsg"; version="0.9.5"; sha256="1dn7yr957qa47c0hxdq2c27qvdpg9iy5i0lwz4kijz9yph2daahh"; depends=[]; }; statGraph = derive2 { name="statGraph"; version="0.1.0"; sha256="13wfylb92lzw08fn3p000v87abs7ij2rb82np1rkgsl8w2kica73"; depends=[igraph MASS]; }; statar = derive2 { name="statar"; version="0.6.5"; sha256="0vmdrdq6db16vfl0rb39x8yfnbdzpcrvywfgp4lss6jby3nvjwd9"; depends=[data_table dplyr ggplot2 lazyeval matrixStats rlang stringr tidyr]; }; statcheck = derive2 { name="statcheck"; version="1.3.0"; sha256="0ivybdcrymlsfv6pg6p5bv70qdvgxf2vgp0kf4r0pf2fcvav1mcp"; depends=[ggplot2 plyr rmarkdown]; }; statebins = derive2 { name="statebins"; version="1.2.2"; sha256="0qfs796dk5x983qah32w3npv9mxzljp3g7kffdd0ansn3z7i1zbb"; depends=[ggplot2 gridExtra RColorBrewer scales]; }; states = derive2 { name="states"; version="0.2.1"; sha256="1f0cwv1jkl4nw0p31p147g71nira5f4hwq8lhjnmns28xq04by24"; depends=[dplyr lubridate]; }; statesRcontiguous = derive2 { name="statesRcontiguous"; version="0.1.0"; sha256="0yzi6ycfj4cc4q0zzzckdz65wp9m4yx6fi7kp9nssj9pj6a8xlrp"; depends=[dplyr magrittr sf]; }; - stationaRy = derive2 { name="stationaRy"; version="0.4.1"; sha256="1iyzg40vi1l4s68kh50in1p97pcb28z6n932cgrx5k1rv3api13g"; depends=[downloader dplyr leaflet lubridate plyr progress readr stringr]; }; - statip = derive2 { name="statip"; version="0.1.5"; sha256="1gyn86kg96yrs9drc23xabf4s8ii32hgjla310sy6pd7c97bwqgf"; depends=[bazar dplyr]; }; + stationery = derive2 { name="stationery"; version="0.98.5.5"; sha256="0c7v9nhbcmdi4c2i185j3fbckqcjr6f0x1pw5dchsp4cw59nr1mc"; depends=[knitr kutils rmarkdown]; }; + statip = derive2 { name="statip"; version="0.2.0"; sha256="012caxqa04qv3z49cz09qzh9crfbdc4il2d2b96l5d3qnqv9xbh9"; depends=[bazar clue rpart]; }; statmod = derive2 { name="statmod"; version="1.4.30"; sha256="07v4x8af60alcw6vbiwf5fp25bhra61kvxz9kqx64lszm0i1fb4x"; depends=[]; }; - statnet = derive2 { name="statnet"; version="2016.9"; sha256="1j5z7awvac3sb66ma1lrc9j23m6hmzqfnqxc0znsm36h324y3y6s"; depends=[ergm ergm_count network networkDynamic sna statnet_common tergm]; }; + statnet = derive2 { name="statnet"; version="2018.10"; sha256="1v0l8bjnqzz9b0b32b31kqmasw0aw4hnlwidlr3xfhbd9clyhyiq"; depends=[ergm ergm_count network networkDynamic sna statnet_common tergm tsna]; }; statnet_common = derive2 { name="statnet.common"; version="4.1.4"; sha256="14dydm4c4dzc4v6ldxpn04q551nczzfablwibrd8lzgja8x9ksic"; depends=[coda]; }; - statnetWeb = derive2 { name="statnetWeb"; version="0.4.0"; sha256="0gqvvpz9435wakpgf5jsznwgd3fix1vyabh87bnnfsm3pfs7rf2x"; depends=[ergm lattice latticeExtra network RColorBrewer shiny sna]; }; + statnetWeb = derive2 { name="statnetWeb"; version="0.5.0"; sha256="02344i8rhjxy8ainfvf5vn39g1nk2n448l76cg74cyxv6zv4f55w"; depends=[ergm lattice latticeExtra network RColorBrewer shiny sna]; }; statprograms = derive2 { name="statprograms"; version="0.2.0"; sha256="0m7px7fmpz2zzlfdi7rbllcjvcjp8iy94f6fa1w4xinh7vz3y6vq"; depends=[]; }; statquotes = derive2 { name="statquotes"; version="0.2.2"; sha256="1xzc3ndddjrlyld0p4zcwwxkj7i3m3adj7c78x9l4lhlw9mxbbqg"; depends=[stringr tidytext wordcloud]; }; statsDK = derive2 { name="statsDK"; version="0.1.1"; sha256="0insx4sivac0nfxaa11iz9dd7374g51fcndsgljj3f14zw1xyq66"; depends=[dplyr ggplot2 httr jsonlite lubridate readr stringr tibble tidyr]; }; @@ -11687,43 +12196,45 @@ in with self; { stddiff = derive2 { name="stddiff"; version="2.0"; sha256="0mik01a8agcdpjq4r7lcdf3w2jcy6s9gx9zl7plzvnl2r3s5xw5b"; depends=[]; }; stdvectors = derive2 { name="stdvectors"; version="0.0.5"; sha256="0gxylknr146qyg9aj22md076cdhrsz75dg25a1hx8525cm71nwd6"; depends=[Rcpp]; }; steadyICA = derive2 { name="steadyICA"; version="1.0"; sha256="0mcalbsgajdpk45k9vpyavn079063hw4ihkw72n9wcy5nb0da14g"; depends=[clue combinat MASS Rcpp]; }; - steemr = derive2 { name="steemr"; version="0.0.4"; sha256="10x90l00mq1aq7xf69vl7lpax0gl9grq182ixp3iwn3pa1wifmpm"; depends=[lattice openair RCurl rlist tm VennDiagram wordcloud XML zoo]; }; + steemr = derive2 { name="steemr"; version="0.0.5"; sha256="012kiglvdpkwd701m5brhb87bljrkvw3j3v95ga5irjlddrgww34"; depends=[RCurl XML]; }; steepness = derive2 { name="steepness"; version="0.2-2"; sha256="0bw7wm7n2xspkmj90qsjfssnig683s3qwg1ndkq2aw3f6clh4ilm"; depends=[]; }; stellaR = derive2 { name="stellaR"; version="0.3-3"; sha256="098sz6b8pl3fyca3g6myp97nna368xhxf8krmibadnnsr49q5zs9"; depends=[]; }; - stellaRbase = derive2 { name="stellaRbase"; version="0.1.0"; sha256="1jwhh14wk57z8acg8vjd7m3nwq0vq4w0x9ml8zhk3gnl4czq8m04"; depends=[data_table httr RJSONIO]; }; stemmatology = derive2 { name="stemmatology"; version="0.3.1"; sha256="1ln5cvn4yldr8xdgadlfzkgxbv6im39mdsdz597zailqnfsr576g"; depends=[cluster igraph xml2]; }; + stepPenal = derive2 { name="stepPenal"; version="0.2"; sha256="08gizl6c606ibbv7x2rdvfw37rghkrprwszha79yngkzpajw8gql"; depends=[caret dfoptim glmnet mvtnorm pROC]; }; stepPlr = derive2 { name="stepPlr"; version="0.93"; sha256="1i54nyz8z5vq3mzfh6h2vd1q0hsdazc4mhrj9ad0zdvn0qnz61lv"; depends=[]; }; stepR = derive2 { name="stepR"; version="2.0-2"; sha256="0inxlgihyivfr0l4gk8zq0043l9s5w4r3x3hwjlzfwbqjkwy1rjs"; depends=[digest R_cache Rcpp]; }; - stepp = derive2 { name="stepp"; version="3.0-11"; sha256="0jrwfvcgh3sjm3zag93kjyny2qqsyiw988vnx6jw7s31bv9g0d6s"; depends=[car survival]; }; + stepp = derive2 { name="stepp"; version="3.2.0.0"; sha256="0fnjqbncadscv6ryvqyqf8qqgpfzh2hka5ld2zvw39mjqzy5gadi"; depends=[car survival]; }; stepwise = derive2 { name="stepwise"; version="0.3"; sha256="1lbx1bxwkf9dw6q46w40pp7h5nkxgghmx8rkpaymm6iybc7gyir2"; depends=[]; }; stheoreme = derive2 { name="stheoreme"; version="1.2"; sha256="14w3jcbs8y8cz44xlq8yybr2jwgk3w7s2msgjhlp1vazy8959s65"; depends=[]; }; sticky = derive2 { name="sticky"; version="0.5.2"; sha256="0yib9llvlxyzcwam3qd3wxz91mdacvh4v888ifxwjhhjihffqvbj"; depends=[]; }; - stilt = derive2 { name="stilt"; version="1.2.0"; sha256="1b9z64g1v5764h3y75xk1zkcv3imskvd44nqjp5m2dzmsw33nzji"; depends=[fields]; }; - stinepack = derive2 { name="stinepack"; version="1.3"; sha256="0kjpcjqkwndqs7cyc6w62z1nnkqmhkifz2w0bi341jh0ybmak4fq"; depends=[]; }; + stilt = derive2 { name="stilt"; version="1.3.0"; sha256="0b1bs849hw2wcvaldybxk8h8wgwl6p7x4i7winncvngmhplgrvx4"; depends=[fields]; }; + stima = derive2 { name="stima"; version="1.2"; sha256="1784807cdscjy441f41bbqq7fx7c59c4mwwnhg1nnizybnwa993r"; depends=[rpart]; }; + stinepack = derive2 { name="stinepack"; version="1.4"; sha256="0crl77gr4x2bz2zp0a0lqiw5iqlrcx7vj67igkbzg64d1fxai85d"; depends=[]; }; stlplus = derive2 { name="stlplus"; version="0.5.1"; sha256="14728xsm982z9sg4rbqg307pbwqlsiyzj8z3sr9wr6fi0dayf6z5"; depends=[lattice Rcpp yaImpute]; }; stm = derive2 { name="stm"; version="1.3.3"; sha256="1b1i4r161i92f5q63zjfghzg39bw9d2rqdxx0y6zjd8n2p0ni3wv"; depends=[data_table glmnet lda Matrix matrixStats quadprog quanteda Rcpp RcppArmadillo slam stringr]; }; stmCorrViz = derive2 { name="stmCorrViz"; version="1.3"; sha256="1a4pckrbzsihyf1bqvw3cl0hxrc4yq1pnkgxgf4b8jday6zkxwcv"; depends=[jsonlite SnowballC stm tm]; }; stmgp = derive2 { name="stmgp"; version="1.0"; sha256="1v6ahg4icyrz8p0lfiyi2x90allhjvcq8rycinas5mffg7xgpv7d"; depends=[MASS]; }; stmgui = derive2 { name="stmgui"; version="0.1.6"; sha256="1fn2m5l7y3p1riw39g6r3hpjxdccygih7yipp7dvc4msl9fm4h5c"; depends=[markdown shiny shinyBS shinyjs shinythemes stm tm]; }; - stminsights = derive2 { name="stminsights"; version="0.2.0"; sha256="0s4gnb3cb5vb4x4vmwa2dz7l7m8d0mqhrc8lmaa912s16y05y63z"; depends=[dplyr ggplot2 ggraph ggrepel huge igraph purrr scales shiny shinyBS shinydashboard shinyjs stm stringr tibble tidygraph]; }; + stminsights = derive2 { name="stminsights"; version="0.2.2"; sha256="13b94z4wp24hbmwz1hkyds2p7adp48rvp6rd7lh0l3qm0k3q6krb"; depends=[dplyr ggplot2 ggraph ggrepel huge igraph purrr readr scales shiny shinyBS shinydashboard shinyjs stm stringr tibble tidygraph]; }; stoRy = derive2 { name="stoRy"; version="0.1.2"; sha256="1n2ivdv6fa3qkk2xhgcy8cixpbw6mijr4p8q34q8d9fvh9qs9g11"; depends=[data_tree R6]; }; stocc = derive2 { name="stocc"; version="1.30"; sha256="0xpf9101094l5l75p9lr64gwh2b8jh4saw6z6m2nbn197la3acpw"; depends=[coda fields Matrix rARPACK truncnorm]; }; stochprofML = derive2 { name="stochprofML"; version="1.2"; sha256="0gqfm2l2hq1dy3cvg9v2ksphydqdmaj8lppl5s5as2khnh6bd1l1"; depends=[MASS numDeriv]; }; stochvol = derive2 { name="stochvol"; version="1.3.3"; sha256="0cg61djjfw4jmq71g8kddrihdy9n2vlpzlf7kl2f3p8njc1f8kk2"; depends=[coda Rcpp RcppArmadillo]; }; stockR = derive2 { name="stockR"; version="1.0.68"; sha256="0pgyxh19csv21vgji1sjpqaaqb1wwz62mnsf85a97ba9aph9lxwb"; depends=[gtools]; }; - stocks = derive2 { name="stocks"; version="1.1.3"; sha256="0zpmx32dxv672ifk1m725ww286g4r09dvxvnk146vpwlk4mk11d0"; depends=[dvmisc Hmisc lubridate quantmod rbenchmark RColorBrewer Rcpp zoo]; }; + stocks = derive2 { name="stocks"; version="1.1.4"; sha256="0b6rl7pfkgzbpwnv7zzkr36hs5f1zb60d16ijslf7g9m25vvcyg6"; depends=[dvmisc Hmisc lubridate quantmod rbenchmark RColorBrewer Rcpp TTR zoo]; }; stoichcalc = derive2 { name="stoichcalc"; version="1.1-3"; sha256="0z9fnapibfp070jxg27k74fdxpgszl07xiqfj448dkydpg8ydkrb"; depends=[]; }; stopwords = derive2 { name="stopwords"; version="0.9.0"; sha256="050v3hq1wd3w83zrp76nv6n67qsf5fss2cbihb6waijancm7zfzh"; depends=[ISOcodes]; }; - stormwindmodel = derive2 { name="stormwindmodel"; version="0.1.0"; sha256="1pxkb0ijx04c4bk6szxhj8lxq6x76m8pyhxpf8xq63h4gh57fxh3"; depends=[dplyr ggplot2 lubridate maps plyr stringr tidyr weathermetrics]; }; - storr = derive2 { name="storr"; version="1.2.0"; sha256="0rsj84yfvy3y02cv0s25fq6ji4rfh7nnrpacbka0lhrxf698h5ga"; depends=[digest R6]; }; + stormwindmodel = derive2 { name="stormwindmodel"; version="0.1.1"; sha256="16w6si2icpsyhkn0d3l6sh64nj6ynyymp7jxfwa792ds2wrz2mkm"; depends=[dplyr ggplot2 lubridate maps plyr stringr tidyr weathermetrics]; }; + storr = derive2 { name="storr"; version="1.2.1"; sha256="0409gb6wji3cjxkdcd0wc3jvsx61h3rxd8a3nr018y8rh1rpsaj6"; depends=[digest R6]; }; stosim = derive2 { name="stosim"; version="0.0.14"; sha256="10k8j7manskjsrjc1l44yhy682b1qh0k2jx3cs5k69j2z42mnhmk"; depends=[Rcpp]; }; - stplanr = derive2 { name="stplanr"; version="0.2.5"; sha256="0r386bvsmglap6cxs6k3mn8bdahlbxb3qv2k4iqg2fr2r62dalf7"; depends=[curl dplyr geosphere httr igraph jsonlite lubridate lwgeom maptools nabor openxlsx R_utils raster Rcpp RcppArmadillo readr rgdal rgeos rlang sf sp stringi stringr]; }; - stpm = derive2 { name="stpm"; version="1.6.9"; sha256="1pj8lxych7fgrimi5c237f4vi6yc51ya3zwcq0qk3py96nixcpxn"; depends=[knitcitations nloptr Rcpp RcppArmadillo sas7bdat survival]; }; + stplanr = derive2 { name="stplanr"; version="0.2.6"; sha256="1v8x8gql4y6avxkpnjg4wb31hwim3admshwp4wcvfingxvzplxb2"; depends=[curl dplyr geosphere httr igraph jsonlite lubridate lwgeom maptools nabor openxlsx R_utils raster Rcpp RcppArmadillo readr rgdal rgeos rlang sf sp stringi stringr]; }; + stpm = derive2 { name="stpm"; version="1.7.7"; sha256="1l40zb9qwshg7saqmgi7c49a3jd93ycrbvmysgzs0q8pl94vgcfs"; depends=[knitcitations MASS nloptr Rcpp RcppArmadillo sas7bdat survival]; }; stpp = derive2 { name="stpp"; version="2.0-3"; sha256="18icnfrlrcibrpw7vqkrhzfx880ak24xk6llwgiqw18r929mq1hw"; depends=[ggplot2 gridExtra KernSmooth plot3D rgl rpanel spatstat splancs]; }; strandCet = derive2 { name="strandCet"; version="1.0"; sha256="019cacj0g9f6i8v03rq7qyph7f14d8n0qw0axvczijvnk99q602a"; depends=[boot corpcor MASS minpack_lm mvtnorm numDeriv]; }; stranger = derive2 { name="stranger"; version="0.3.3"; sha256="0p0ssba5q192g7pviv1shmh1lpcdjmzdim3rp1qs3hrd1d3pn4vq"; depends=[assertthat data_table dplyr ggplot2 tidyr]; }; strap = derive2 { name="strap"; version="1.4"; sha256="0gdvx02w0dv1cq9bb2yvap00lsssklfnqw0mwsgblcy2j6fln7b0"; depends=[ape geoscale]; }; strat = derive2 { name="strat"; version="0.1"; sha256="1axxrp750kjzcgxjdqfscjmryv1mkv4l23zk8k23z8l4ymhd2f5w"; depends=[Hmisc Rcpp RcppArmadillo]; }; + stratEst = derive2 { name="stratEst"; version="0.1.0"; sha256="06xddfgddrcd0fjc2hiqmxh9i7szrvay5phhd7k5y1bdmjav7q2c"; depends=[Rcpp RcppArmadillo]; }; strataG = derive2 { name="strataG"; version="2.0.2"; sha256="1rf1xf07yb0dzasgig9sfm4i9ggdkjgy5iiysqgdapk3sxs26c8r"; depends=[adegenet ape apex copula data_table DT ggplot2 gridExtra Hmisc pegas phangorn RColorBrewer Rcpp shiny shinyFiles survival swfscMisc]; }; stratbr = derive2 { name="stratbr"; version="1.2"; sha256="15vkymmc61yz9szhfhc5663hfyqvh499ahwhr9mv1lhv5bikk0kb"; depends=[Rglpk snowfall stratification]; }; strategicplayers = derive2 { name="strategicplayers"; version="1.0"; sha256="19vijrlzawd701vvk9ig7yhzbirh39dxxcwfz8ywwvxxiaky5x55"; depends=[sna]; }; @@ -11732,28 +12243,31 @@ in with self; { stratvns = derive2 { name="stratvns"; version="1.0"; sha256="1bw9l389lxiji4h7hrsshf24v135h6la9dg3xxjly53d4fi56ifh"; depends=[MultAlloc Rglpk sampling snowfall stratification]; }; stream = derive2 { name="stream"; version="1.3-0"; sha256="0wj6j070wmiw50vmjs075jm7k7aaryq4qm8dnj522vr7g0ryvkdh"; depends=[animation BH clue cluster clusterGeneration dbscan fpc MASS mlbench proxy Rcpp]; }; streamMOA = derive2 { name="streamMOA"; version="1.1-4"; sha256="09vspcz806j2f397hr8h685vy4xbx419bbha91f44s3bhks1y7fr"; depends=[rJava stream]; }; - streamR = derive2 { name="streamR"; version="0.4.3"; sha256="174iliizvr050mm3z9gz44f264xp1kclbvq1amynqal2kv8k7yj1"; depends=[ndjson RCurl rjson]; }; + streamR = derive2 { name="streamR"; version="0.4.4"; sha256="0xb0bzp3axflwrbxc6zsscmq8bn7qhlsk00l10qlxm4h1mh8xnlb"; depends=[ndjson RCurl rjson]; }; streambugs = derive2 { name="streambugs"; version="1.0"; sha256="1dyh5rwi47dn584nyy7f7vg5j5nlpz7ygcl8lwkj7prahplmzg5d"; depends=[deSolve]; }; stressr = derive2 { name="stressr"; version="1.0.0"; sha256="00b93gfh1jd5r7i3dhsfqjidrczf693kyqlsa1krdndg8f0jkyj7"; depends=[lattice latticeExtra XML xts]; }; + strex = derive2 { name="strex"; version="0.1.2"; sha256="12hbzlkihzvmyd8qx147bk57cia2db4w9k6wh7csbbqp95cy77bi"; depends=[checkmate glue magrittr matrixStats ore purrr Rcpp rlang stringr tibble]; }; strider = derive2 { name="strider"; version="1.1"; sha256="00r6gbvwmla5h27iyi7rdfd0kr4alxz19fd7g2ba0in3779za3sw"; depends=[BH Rcpp]; }; stringb = derive2 { name="stringb"; version="0.1.13"; sha256="004bp75yhrgr480v9774kfq7z5l9z0761cnrwj4yk7fxygk89a1x"; depends=[backports]; }; stringdist = derive2 { name="stringdist"; version="0.9.5.1"; sha256="0gap1g9xwhp0zxqsznkc2carpvi80z03prr4q8m528684lznx2xa"; depends=[]; }; stringformattr = derive2 { name="stringformattr"; version="0.1.2"; sha256="0x56k30clj5ajk0qg5sr8b9l0asz6ldivwr1ddy1vp1djliih1fx"; depends=[stringr]; }; - stringi = derive2 { name="stringi"; version="1.2.3"; sha256="1sgg4krw03qkz1n4dwiya0djggk7giwd0w21qlp0pfjqi0rxq6qx"; depends=[]; }; + stringi = derive2 { name="stringi"; version="1.2.4"; sha256="1y46xab7g1lsjmilp4hbl7pjad6pcxp66hdj8wnfdg9518h0lmq1"; depends=[]; }; stringr = derive2 { name="stringr"; version="1.3.1"; sha256="0hq3ybz7clnifi5wdm2s6p2i0kzljdkv26blg6yphng472h8x2vs"; depends=[glue magrittr stringi]; }; - strip = derive2 { name="strip"; version="0.1.1"; sha256="18pz6ix6d661fvg1k1yyyiiwa1gdixynmpxl725ffd9lpykmfqbw"; depends=[rlist]; }; + strip = derive2 { name="strip"; version="0.1.7"; sha256="1nzl5513s0gfd3mhnp9xzmhaj8q46lmdpv7j5jni8f50pnm3niay"; depends=[rlist]; }; stripless = derive2 { name="stripless"; version="1.0-3"; sha256="08mdp7kq6r5bk77j09477d1dnn7iwa346pr24b5bqsxwnbknyrsr"; depends=[lattice]; }; striprtf = derive2 { name="striprtf"; version="0.5.1"; sha256="1pv67grm8fb1plsfxrfrmv0yk6cjnf44ssawddlcxy9mvg3ka5mm"; depends=[magrittr Rcpp stringr]; }; strucchange = derive2 { name="strucchange"; version="1.5-1"; sha256="0cdgvl6kphm2i59bmnppn1y3kv65ml111bk7yzpcx7vv8wh2w3kl"; depends=[sandwich zoo]; }; structSSI = derive2 { name="structSSI"; version="1.1.1"; sha256="06rwmrgqc4qy4x0bhlshjdsjxfmp5fr9d1wjglhlb1gbp72fmkdv"; depends=[ggplot2 igraph multtest reshape2 rjson]; }; structree = derive2 { name="structree"; version="1.1.5"; sha256="0m14jzhmkfn8dpxjzj8xh9zf6cggqj3awnfz7zh1xlkkka91jz8d"; depends=[lme4 mgcv penalized]; }; strum = derive2 { name="strum"; version="0.6.2"; sha256="0f5cb7cfvqhmnv4sjfr58lns4fclmr8iyka595zddy9f6dv5rqp1"; depends=[graph MASS Matrix pedigree Rcpp RcppArmadillo Rgraphviz]; }; - strvalidator = derive2 { name="strvalidator"; version="2.0.0"; sha256="03f7clhs1hda3lkard7lbx4pfyqvhwm35r3d9sz2yksp5s78wbjk"; depends=[data_table ggplot2 gridExtra gtable gWidgets2 gWidgets2RGtk2 MASS plyr RGtk2 scales]; }; + strvalidator = derive2 { name="strvalidator"; version="2.1.0"; sha256="15qpdbqr740bn2zimfyspj6arzigc39hdf73yy9lbk6vhiq43yyq"; depends=[data_table ggplot2 gridExtra gtable gWidgets2 gWidgets2RGtk2 MASS plyr RGtk2 scales]; }; stsm = derive2 { name="stsm"; version="1.9"; sha256="18ypmkd7l7m7qkahb0nqf8f1m8g4irxlw48v2ms0dq1bsnhbzx7j"; depends=[KFKSDS]; }; stsm_class = derive2 { name="stsm.class"; version="1.3"; sha256="19jrja5ff31gh5k2zqhqsyd7w2ivr4s6bkliash6x8fmd22h5zs8"; depends=[]; }; + stuart = derive2 { name="stuart"; version="0.7.3"; sha256="0xd85ijshhsyzkm22vacjl2p7ni8x3zfypmrwmvvba5x9l82s3hi"; depends=[]; }; stubthat = derive2 { name="stubthat"; version="1.2.1"; sha256="130naxzvswcyadwcgldvwnxxdxbfwx5vljac7901vn3ahjp75d8z"; depends=[testthat]; }; styler = derive2 { name="styler"; version="1.0.2"; sha256="0rsbaszwr0089imcwracjss52ivjzlcba9j0sqvpza4qgd0yjmd4"; depends=[backports cli enc magrittr purrr rematch2 rlang rprojroot tibble withr]; }; - stylo = derive2 { name="stylo"; version="0.6.7"; sha256="0l5msnv6sk90p3l7ma2q31yn93y1zj86y5hzzg2fws4r0pi09p19"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; }; + stylest = derive2 { name="stylest"; version="0.1.0"; sha256="0dr7j9fh8kp6wsqql38s3rk596xl6m9nx0w1l5v25hv2bphidxzr"; depends=[corpus Matrix]; }; + stylo = derive2 { name="stylo"; version="0.6.8"; sha256="1j27hyjsjs3y76lb0pn92ng23q0lk7w69vdx3429q610dixqdfim"; depends=[ape class e1071 lattice pamr tcltk2 tsne]; }; suRtex = derive2 { name="suRtex"; version="0.9"; sha256="0xcy3x1079v10bn3n3y6lxignb9n3h57w4hhrvzi5y14x05jjyda"; depends=[]; }; subcopem2D = derive2 { name="subcopem2D"; version="1.2"; sha256="1yrjqg3y6i5m6k0zljq1p1pciicmc1vig3qd0wxaicz708rbp3yq"; depends=[]; }; subdetect = derive2 { name="subdetect"; version="1.1"; sha256="1bcc13avs5w9vmwyf71cnjd2kwmcavmzpwyv8gvsn61n7b4j8wlk"; depends=[]; }; @@ -11763,7 +12277,7 @@ in with self; { submax = derive2 { name="submax"; version="1.1.1"; sha256="0b9x55gqzw20smr3hx9izvyr0i8zv0h03hadn4c7ks7w8ga5i0kj"; depends=[mvtnorm sensitivityfull]; }; subniche = derive2 { name="subniche"; version="0.9.7"; sha256="1jsdcaf6d38j7c0ppjyilj0jd2dbpdldw6w4prmsbmx8mh7lplww"; depends=[ade4]; }; subplex = derive2 { name="subplex"; version="1.5-4"; sha256="10cbgbx1bgsax5z7gz6716g360xpq4mvq19cf4qqrxv02mmwz57z"; depends=[]; }; - subprocess = derive2 { name="subprocess"; version="0.8.2"; sha256="1qyl8726vq94vqd6iyh9kca6wwxi3g7yv4b784wn2ifrm4waixxd"; depends=[]; }; + subprocess = derive2 { name="subprocess"; version="0.8.3"; sha256="00720hj685449vhjqm9q6rrsn5jyxnxwq3pgxpbsnrhmwa697w89"; depends=[]; }; subrank = derive2 { name="subrank"; version="0.9.9.1"; sha256="19lgw7248jq6b34i17c7vw208wsvmppni7njswd02i9xdgyjn95z"; depends=[]; }; subsamp = derive2 { name="subsamp"; version="0.1.0"; sha256="1bfz2z2qy1war3id8qr1asygwvwxgf2hhlh075hr6bjdkxz0j0nd"; depends=[]; }; subscore = derive2 { name="subscore"; version="2.0"; sha256="1vscmzw6ama2kc7ic6b2rfbbczcpyhp0m4dd5khg9vkyihww5b5h"; depends=[CTT irtoys]; }; @@ -11775,14 +12289,14 @@ in with self; { subtype = derive2 { name="subtype"; version="1.0"; sha256="1094q46j0njkkqv09slliclp3jf8hkg4147hmisggy433xwd19xh"; depends=[penalized ROCR]; }; sudoku = derive2 { name="sudoku"; version="2.6"; sha256="13j7m06m38s654wn75kbbrin5nqda4faiawlsharxgrljcibcbrk"; depends=[]; }; sudokuAlt = derive2 { name="sudokuAlt"; version="0.1-11"; sha256="1hv9d99ir1xz6p0arxr77dv5qb45sr8jhapm6wf755l7pxlqqklq"; depends=[magrittr]; }; - sugrrants = derive2 { name="sugrrants"; version="0.1.2"; sha256="0l9v2wqb8wsp002gc802xcawwyv56rn765ipp6d1mzds3sp438h7"; depends=[dplyr ggplot2 lubridate purrr readr rlang tidyr timeDate tsibble]; }; + sugrrants = derive2 { name="sugrrants"; version="0.2.0"; sha256="0860jc979f5j0697hksx5bzrrmq7jqi9461w3f1m9xbgd0d01ag2"; depends=[dplyr ggplot2 gtable lubridate rlang]; }; sumFREGAT = derive2 { name="sumFREGAT"; version="1.0.0"; sha256="13g3px3c3dxacrvgwrvqdp8lm7k185npr0dlq3siq9x9mgjr7hsj"; depends=[Matrix]; }; summariser = derive2 { name="summariser"; version="0.1.0"; sha256="0a6wyb0r1i0cynld002q96ylr58jz76n5jqjz8gm6a3csjn9qss7"; depends=[dplyr ggplot2 lazyeval plotrix]; }; - summarytools = derive2 { name="summarytools"; version="0.8.5"; sha256="0455csyz3hd9armpw18r1lgbzbyr6i43wyampp4n0s0lr95flp46"; depends=[htmltools lubridate matrixStats pander pryr rapportools RCurl]; }; - sunburstR = derive2 { name="sunburstR"; version="2.0.0"; sha256="1gkrgm90ps5i1k5cqdw6sbvd4jgbk4yq82gwd5m1z1jhv1shfsf4"; depends=[d3r dplyr htmltools htmlwidgets]; }; + summarytools = derive2 { name="summarytools"; version="0.8.8"; sha256="0z836m6ib9bznwcawn6xf8gck05ydxwi3bx4jbrbyqql4kci8zwb"; depends=[htmltools lubridate matrixStats pander pryr rapportools RCurl]; }; + sunburstR = derive2 { name="sunburstR"; version="2.1.0"; sha256="0dg988fnm9z1p14j2l604q4aqb83vrijvafbpc1l4kn0dg3cs1ff"; depends=[d3r dplyr htmltools htmlwidgets]; }; suncalc = derive2 { name="suncalc"; version="0.4"; sha256="190bnh26bl26piq6512ijrx2hygzdscryjsjyz8y4ara8bf646r3"; depends=[V8]; }; - sundialr = derive2 { name="sundialr"; version="0.1.0"; sha256="0r6nijpj6vbz9ssrdhxn01frhahnqg4n1bsfg6d43c1smj563y6m"; depends=[Rcpp]; }; - supc = derive2 { name="supc"; version="0.1"; sha256="1cq0lr04m409xr3i1hphww4ldr8z3kqq2gmp7hm3yp0iz2gy3m9a"; depends=[BH Rcpp]; }; + sundialr = derive2 { name="sundialr"; version="0.1.1"; sha256="1f56hqh9ah5chwwr4ak39hc4q49hpzz398spifkv6zyd0sy8kc8s"; depends=[Rcpp]; }; + supc = derive2 { name="supc"; version="0.2.1"; sha256="121dy7ymvxvq3ksf17hg0df74ycd2nag2z2ggnw4p2rwzj99vgc5"; depends=[BH Rcpp]; }; supclust = derive2 { name="supclust"; version="1.0-7"; sha256="0437pccagvqv6ikdsgzpif9yyiv6p24lhn5frk6yqby2asj09727"; depends=[class rpart]; }; supcluster = derive2 { name="supcluster"; version="1.0"; sha256="1rkd4bpzzvzbmqaj907pqv53hxcgic0jklbsf5iayf0ra768b5w6"; depends=[gtools mvtnorm]; }; superMDS = derive2 { name="superMDS"; version="1.0.2"; sha256="0jxbwm3izk7bc3bd01ygisn6ihnapg9k5lr6nbkr96d3blpikk04"; depends=[]; }; @@ -11792,22 +12306,21 @@ in with self; { supernova = derive2 { name="supernova"; version="1.1"; sha256="0n34fkscml6ldbcr6kk8c6n4f5z4j398qn1vsp06h3b0h6sl5rrb"; depends=[]; }; superpc = derive2 { name="superpc"; version="1.09"; sha256="1p3xlg2n7p57n54g2w4frfrng5vjh97kp6ax4mrgvj3pqmd1m69z"; depends=[survival]; }; supervisedPRIM = derive2 { name="supervisedPRIM"; version="2.0.0"; sha256="1j5gsy119pvrhkkg048lyk6hjvn9x1bhmfy5g824gj3k1w5slrib"; depends=[prim]; }; - support = derive2 { name="support"; version="0.1.1"; sha256="0031dqkjwsi7s7bmvidjnivqxlh43q0ak2jnqnzm8h7sp0kfwjwf"; depends=[BH doParallel matrixStats MHadaptive nloptr randtoolbox Rcpp RcppArmadillo]; }; + support = derive2 { name="support"; version="0.1.2"; sha256="1ih32hhgkbrdmjprqqf1sqlijgibzsrzh37i8jfmfb8n0d6h4x5a"; depends=[BH doParallel matrixStats MHadaptive nloptr randtoolbox Rcpp RcppArmadillo]; }; support_BWS = derive2 { name="support.BWS"; version="0.2-0"; sha256="1yfjpr9v9zsbkysm3r6zk9r0a072g038lmj9wk4014a3rk9kmm80"; depends=[]; }; support_BWS2 = derive2 { name="support.BWS2"; version="0.1-2"; sha256="069n7kxl74v42rjxb153yk1p81izkbvi7k6r8zd5d78jx54w7igb"; depends=[]; }; support_CEs = derive2 { name="support.CEs"; version="0.4-1"; sha256="1rbyl7v6m07dsp08kkk9020bh39rhx89q7d05rc5kxb6f7y66jyz"; depends=[DoE_base MASS RCurl simex XML]; }; supportInt = derive2 { name="supportInt"; version="1.1"; sha256="14fh75sds05c06xkcfbijd8my3sa9kpnczzh96xx0gwj1193yya9"; depends=[ProfileLikelihood]; }; sure = derive2 { name="sure"; version="0.2.0"; sha256="0gwr2j321i2vq98rin5b1m4sl123dm1nih1ghcmj0zd1wd6x5x54"; depends=[ggplot2 goftest gridExtra]; }; surface = derive2 { name="surface"; version="0.4-1"; sha256="0z7fh09hjmxfmqzi588gjwqqlpj1a475aixrnvy911lkx3zfk146"; depends=[ape geiger MASS ouch]; }; - surrosurv = derive2 { name="surrosurv"; version="1.1.24"; sha256="0c18pjkqgp5nm927jvcbgpfa4knrhnsq0492d1ysfr1li8sf9n7q"; depends=[copula eha lme4 MASS Matrix msm mvmeta optextras optimx parfm SurvCorr survival]; }; + surrosurvROC = derive2 { name="surrosurvROC"; version="0.1.0"; sha256="1dpqr9dqzckgvdfrb2ndxazra0lbp6db9wbjch4vig3kyz6nyw4y"; depends=[survival]; }; surv2sampleComp = derive2 { name="surv2sampleComp"; version="1.0-5"; sha256="0pk70q33il9clz0ikzx1cypg5ygnsqp5hgk67xczzbidksjzs4dn"; depends=[flexsurv plotrix survival]; }; survAUC = derive2 { name="survAUC"; version="1.0-5"; sha256="0bcj982ib1h0sjql09zbvx3h1m96jy9q37krmk6kfzw25ms6bzzr"; depends=[survival]; }; survAWKMT2 = derive2 { name="survAWKMT2"; version="1.0.0"; sha256="1cv39rf1ia4nwrri9d9izy6lxndnfwqy2vzrb9rrxga2qplxl79k"; depends=[survival]; }; survAccuracyMeasures = derive2 { name="survAccuracyMeasures"; version="1.2"; sha256="1i41xkvqpxpq9spryh1syp57ymlzw71ygdjqn41rv8jjc9q52x9g"; depends=[Rcpp RcppArmadillo survival]; }; survBootOutliers = derive2 { name="survBootOutliers"; version="1.0"; sha256="1gfh2n1kd1m4bpd1j7islm5ar1qmzycnmfpb8zl8ghv0z5rf5f09"; depends=[survival]; }; survC1 = derive2 { name="survC1"; version="1.0-2"; sha256="1bidjhq3k5ab7gqj1b2afngip7pp6c9c7q0m6ww7h7i2vg505l7v"; depends=[survival]; }; - survClip = derive2 { name="survClip"; version="0.2.3"; sha256="1s82z8cld6qlg6dv0l4j4vyg58ji9qp7xkg6sxd9s88fpcjdnz3g"; depends=[checkmate clipper corpcor elasticnet FactoMineR graph qpgraph rrcov survival]; }; - survHE = derive2 { name="survHE"; version="1.0.6"; sha256="128pjnm1m12qqhnz2izwmir64m99389qjr73vcqr19dgbkbgv28c"; depends=[BH flexsurv Rcpp RcppEigen rms rstan StanHeaders xlsx]; }; + survHE = derive2 { name="survHE"; version="1.0.64"; sha256="1vqfvmr2dza8hw61b5q0wl22b7gpca7llpq5swdclnll1narff5i"; depends=[BH flexsurv Rcpp RcppEigen rms rstan StanHeaders xlsx]; }; survIDINRI = derive2 { name="survIDINRI"; version="1.1-1"; sha256="03lsypx189zm28gv764gdq24a18jj3kpdk91ssa501qxj5jv7v29"; depends=[survC1 survival]; }; survJamda = derive2 { name="survJamda"; version="1.1.4"; sha256="14ly1g548ysm8jgsyrhj12zmd6i2lca7rsgby3jbwikyqyk1mx5q"; depends=[ecodist survcomp survival survivalROC survJamda_data]; }; survJamda_data = derive2 { name="survJamda.data"; version="1.0.2"; sha256="0a010v2ar48i5m0jiqjvdyqm93ckfgfmcmym9a02h0rclnizd75r"; depends=[]; }; @@ -11816,9 +12329,9 @@ in with self; { survRM2 = derive2 { name="survRM2"; version="1.0-2"; sha256="0pvp65c1kkbkcci4l3cvq4a5krmv58jwb9abz5225ql6jyawzlsw"; depends=[survival]; }; survRM2adapt = derive2 { name="survRM2adapt"; version="1.0-1"; sha256="1r3jvjbc2sb7b00s95b3sdx4d99rmrnd573fx1n4914ydiggi9nn"; depends=[survival]; }; survSNP = derive2 { name="survSNP"; version="0.24"; sha256="0mzwcp8zfqvsiapa446si9qb6wyymnw5zj6acj6f2cfjpyi76k4w"; depends=[foreach lattice Rcpp survival xtable]; }; - surveillance = derive2 { name="surveillance"; version="1.16.1"; sha256="0pr6fy0n684ncl9hf0bp6jfahmihziyyfj2zwnqigkc4bcl091h3"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat xtable]; }; + surveillance = derive2 { name="surveillance"; version="1.16.2"; sha256="1k6wpzsagsq2ixpdhx6b4zzb5wv2j95nsmxyfwvlxkxafahx986h"; depends=[MASS Matrix nlme polyCub Rcpp sp spatstat xtable]; }; survexp_fr = derive2 { name="survexp.fr"; version="1.0"; sha256="12rjpnih0xld4dg5gl7gwxdxmrdmyzsymm7j05v98ynldd1jkjl8"; depends=[survival]; }; - survey = derive2 { name="survey"; version="3.33-2"; sha256="1c4q0005663b0y87ckmf1ra7gm2i5hnlw955pgb11bywh60hg9hl"; depends=[lattice Matrix survival]; }; + survey = derive2 { name="survey"; version="3.34"; sha256="09024mqkbm5aak9rsi9qw97d3xrq2dba3z2hyvydncygjmjymy65"; depends=[lattice Matrix minqa numDeriv survival]; }; surveybootstrap = derive2 { name="surveybootstrap"; version="0.0.1"; sha256="13rp6gj1dgdzcjbi2403pldygp1dyqx8zj0r1nvyghpi06x5gpb7"; depends=[dplyr functional plyr Rcpp RcppArmadillo stringr]; }; surveydata = derive2 { name="surveydata"; version="0.2.0"; sha256="1iwhjhazfy38dbcj224kz3zbw2nvpq01ry54wmmkg9d0n6mb02h4"; depends=[dplyr magrittr plyr purrr stringr]; }; surveyeditor = derive2 { name="surveyeditor"; version="1.0"; sha256="073219bcn1hlxl9ql6gncfvgn0m37pz5sb7h94nq6lf35dymq5zq"; depends=[]; }; @@ -11826,14 +12339,17 @@ in with self; { surveyplanning = derive2 { name="surveyplanning"; version="2.9"; sha256="0ad4122m78hbzhkkaspzpr62bl59w1j8z0qa67slqljjldhq1akv"; depends=[data_table laeken]; }; survidm = derive2 { name="survidm"; version="1.1.0"; sha256="1piwhb8zsqnw284xp0l3ajs8r9amyn8yfng19hkci574mkdgsw4f"; depends=[doParallel doRNG foreach KernSmooth np survival TPmsm]; }; survivALL = derive2 { name="survivALL"; version="0.9.3"; sha256="0lnvs7b097sl21gvnfafdprzvh197p1q4nzzagkdf4xm1xw8pj0h"; depends=[cowplot desiR ggplot2 ggthemes survcomp survival viridis]; }; - survival = derive2 { name="survival"; version="2.42-4"; sha256="0gnv6r6qrapw867gb9napa8f00dm15aw97lgn6556mn9i9k6d0k7"; depends=[Matrix]; }; + survival = derive2 { name="survival"; version="2.42-6"; sha256="1bsxc2fir9pbvdzy9n474fkl7har606h9zhspp0z67wnjpp48g73"; depends=[Matrix]; }; + survivalAnalysis = derive2 { name="survivalAnalysis"; version="0.1.0"; sha256="148l6qp9gwzpjh7hky9bayggal9cw629xabl34iklqvqlz1im7gb"; depends=[cowplot dplyr forcats ggplot2 gridExtra magrittr purrr rlang scales stringr survival survminer tibble tidyr tidytidbits]; }; survivalMPL = derive2 { name="survivalMPL"; version="0.2"; sha256="05bfa9fx841kh9g2jcs1dimsxkjnf4bxgamcnjpisx3a644c1gkn"; depends=[MASS survival]; }; survivalROC = derive2 { name="survivalROC"; version="1.0.3"; sha256="0wnd65ff5w679hxa1zrpfrx9qg47q21pjxppsga6m3h4iq1yfj8l"; depends=[]; }; survivalsvm = derive2 { name="survivalsvm"; version="0.0.5"; sha256="1b4hrdrqq1z0kfn8vpdwg54388m25df2s6w9i574x3mkxkmkjkga"; depends=[Hmisc kernlab Matrix pracma quadprog survival]; }; - survminer = derive2 { name="survminer"; version="0.4.2"; sha256="15npx3q7xf7sl7pbb1476khgfpqrvidqcb101iim3iym125sl54r"; depends=[broom cmprsk dplyr ggplot2 ggpubr gridExtra magrittr maxstat purrr scales survival survMisc tibble tidyr]; }; + survminer = derive2 { name="survminer"; version="0.4.3"; sha256="0bsjvs7q2ydxvvjka28zsgcpwabqqpvwvb8m5fhhx4rgwlwimfbf"; depends=[broom cmprsk dplyr ggplot2 ggpubr gridExtra magrittr maxstat purrr scales survival survMisc tibble tidyr]; }; survsim = derive2 { name="survsim"; version="1.1.5"; sha256="0194w1h3v4p546wibp3xyhy2r84w3p9r6ggzhlf11v8467mjy0l9"; depends=[eha statmod]; }; + survsup = derive2 { name="survsup"; version="0.0.1"; sha256="16j7ip9qr7q3drb8jzb7ha1ni1m8mr56686blnvlcwih5yqmfkb5"; depends=[broom colorspace dplyr ggplot2 gridExtra survival]; }; survtmle = derive2 { name="survtmle"; version="1.1.0"; sha256="0q1ym4a13xqy3lqjwg40wp28xlp1iqybwq7dd0gp6fnmx3n6373g"; depends=[dplyr ggplot2 ggsci Matrix plyr speedglm stringr SuperLearner tidyr]; }; - survutils = derive2 { name="survutils"; version="1.0.1"; sha256="09844i5nfyn0fm5i8ca96xz8dza21shh2f89w41zh17xaxvidjsw"; depends=[broom dplyr ggplot2 glue lazyeval magrittr purrr survC1 survival]; }; + survutils = derive2 { name="survutils"; version="1.0.2"; sha256="1ws4r5chz0cbf6vjmlj2xv9hmr968xyw8dc5g3j937xpbz40i75h"; depends=[broom dplyr ggplot2 glue lazyeval magrittr purrr survC1 survival]; }; + survxai = derive2 { name="survxai"; version="0.2.0"; sha256="09sk7i0bsk5ql8dibqyykyv95i945bf43xpr4gv22w73zwc0n8hh"; depends=[breakDown ggplot2 pec prodlim scales survival survminer]; }; sutteForecastR = derive2 { name="sutteForecastR"; version="0.1"; sha256="13dd0v3l3s7xb1wnpf6qvnvclzab87831z8bsxsq53vpb26xcw1b"; depends=[forecast forecastHybrid fracdiff robets]; }; svDialogs = derive2 { name="svDialogs"; version="1.0.0"; sha256="0xqppydfawnwk84kb5qiybwbcmv38vn4imgz01mz2pnq4xb80p97"; depends=[rstudioapi svGUI]; }; svDialogstcltk = derive2 { name="svDialogstcltk"; version="0.9-4"; sha256="16166f8i6nsg7palqmnlp5b9s91d6ja9n0zm6rcvd2fwnw2ljkr4"; depends=[svDialogs svGUI]; }; @@ -11848,10 +12364,9 @@ in with self; { svUnit = derive2 { name="svUnit"; version="0.7-12"; sha256="16iiryj3v34zbnk1x05g30paza7al1frqx52fkw8ka61icizsrf5"; depends=[]; }; svWidgets = derive2 { name="svWidgets"; version="0.9-45"; sha256="08cpsy4abypjnv33arsgxk5i0gpdvdzj60wa1b22ca1n7d35mc80"; depends=[svMisc]; }; svapls = derive2 { name="svapls"; version="1.4"; sha256="12gk8wrgp556phdv89jqza22zmsnachsydr5vlz38s664d2lplbg"; depends=[class pls]; }; - svars = derive2 { name="svars"; version="1.2.0"; sha256="06kg9z5clsgg65gjrcb456ppdwk8cja2cmzfwlwmnz5yf3m6lk8k"; depends=[clue copula DEoptim expm ggplot2 pbapply reshape2 steadyICA tsDyn vars zoo]; }; + svars = derive2 { name="svars"; version="1.2.1"; sha256="1kdnrwwrb903a53qr8ppwyw7p0nhgxwgpj2yyd0w248nwswfwhfz"; depends=[clue copula DEoptim expm ggplot2 pbapply reshape2 steadyICA strucchange tsDyn vars zoo]; }; svcm = derive2 { name="svcm"; version="0.1.2"; sha256="1lkik65md8xdxzkmi990dvmbkc6zwkyxv8maypv2vbi2x534jkhl"; depends=[Matrix]; }; svd = derive2 { name="svd"; version="0.4.1"; sha256="00plnwrjnp3majssr3qbz2zp25z9cfivgpggyfvy4lnc4av5qn3g"; depends=[]; }; - svdvis = derive2 { name="svdvis"; version="0.1"; sha256="1z3z86izl2gpxllpx56vn6kkdg9cjjikfd90hdjnfi4bmmpx50dn"; depends=[GGally ggplot2 gridExtra RColorBrewer reshape2 scales]; }; svdvisual = derive2 { name="svdvisual"; version="1.1"; sha256="02mzh2cy4jzb62fd4m1iyq499fzwar99p12pyanbdnmqlx206mc2"; depends=[lattice]; }; svenssonm = derive2 { name="svenssonm"; version="0.1.0"; sha256="0pvay9vfrcafaq270pq6glp2b74zdfgldksl13cwdb0wk7qx7731"; depends=[]; }; svgPanZoom = derive2 { name="svgPanZoom"; version="0.3.3"; sha256="09gfa2943bvmjpnhnc2nr85wddkv662k30pxsqvvvq1va64rzpkc"; depends=[htmlwidgets]; }; @@ -11869,47 +12384,51 @@ in with self; { swamp = derive2 { name="swamp"; version="1.4.1"; sha256="01w44d7rqh6q9wpapd3g7rzllhbm2brwilmna9vk2dwqx57jyim6"; depends=[amap gplots impute MASS]; }; swapClass = derive2 { name="swapClass"; version="1.0.1"; sha256="0wg6km261xdywakxi64dw4wwprbrkw217q4c6622z0mgm9sjgpym"; depends=[inline]; }; swatches = derive2 { name="swatches"; version="0.5.0"; sha256="1kivscgka8gn44rjj0s5sjan1s04znnyn0nd37a74zaik0hm8zs0"; depends=[colorspace httr pack stringr xml2]; }; - sweep = derive2 { name="sweep"; version="0.2.1"; sha256="0v6166p1h14klf1avqvry8jj3as498qnydksy0da8q1bp1sy007f"; depends=[broom devtools dplyr forecast lazyeval lubridate tibble tidyr timetk]; }; + swdft = derive2 { name="swdft"; version="0.0.1"; sha256="0971iyyw537n24wsm7wh126zgb7b3p9161sc2ny293qzbsb7hm1g"; depends=[]; }; + sweep = derive2 { name="sweep"; version="0.2.1.1"; sha256="0hfvgvzr5mh9niwpsr9jcly426dz457afrg4q5w13ahsasx7c9jg"; depends=[broom devtools dplyr forecast lazyeval lubridate tibble tidyr timetk]; }; sweidnumbr = derive2 { name="sweidnumbr"; version="1.4.1"; sha256="014zbp6a66gv7b0f2gmzvifllz266zrc14ihawksvyp1mcxz2ipg"; depends=[lubridate stringr]; }; swfscMisc = derive2 { name="swfscMisc"; version="1.2"; sha256="08p2crsx8zi6qprs14mhdyq9x5sjlp3a46c1zzvp6741an4fy640"; depends=[ggplot2 mapdata maps reshape2 spatstat]; }; - swgee = derive2 { name="swgee"; version="1.2"; sha256="1blfxhvcpfbc0k25xlkw8bxqdmgz3c9ksd9ww2p8k0dy5jd2z64r"; depends=[gee geepack mvtnorm]; }; + swgee = derive2 { name="swgee"; version="1.3"; sha256="0shacrrj72c2yhnbrrryy98yvxb16882zawvfhy1hpf39gspld7n"; depends=[gee geepack mvtnorm]; }; swirl = derive2 { name="swirl"; version="2.4.3"; sha256="1l7gwisk3sjslh6zh4cq3vxf5y84af2fr078cp4i86rw1w2j9d44"; depends=[digest httr RCurl stringr testthat yaml]; }; swirlify = derive2 { name="swirlify"; version="0.5.2"; sha256="07r6rdj079ryafdgs0p8jhnk4h7iqm7agh9wjhvm12abbwjr9g1x"; depends=[base64enc readr rmarkdown shiny shinyAce stringr swirl whisker yaml]; }; swissMrP = derive2 { name="swissMrP"; version="0.62"; sha256="1vy6h6c4v49zlsli77ilj4df8cfh67rqmki71v6j1aqw6kf3b649"; depends=[arm blme lme4 maptools sp]; }; switchnpreg = derive2 { name="switchnpreg"; version="0.8-0"; sha256="1vaanz01vd62ds2g2xv4kjlnvp13h59n8yqikwx07293ixd4qhpw"; depends=[expm fda HiddenMarkov MASS]; }; - switchr = derive2 { name="switchr"; version="0.12.7"; sha256="1ymvghjvbrbsgn49mp8f9n4kv81626pa4pv05hrx813ly8h30mmq"; depends=[RCurl RJSONIO]; }; + switchr = derive2 { name="switchr"; version="0.13.0"; sha256="1ij97gz31gxbmd0fwsw950vhgyd1py3xr4vlh7q98ba1ldzw8dg1"; depends=[RCurl RJSONIO]; }; swmmr = derive2 { name="swmmr"; version="0.8.1"; sha256="0zl00864x9q6a2aqdbqs3b5kw6z50wgr46c62kxk9xkns8317sa7"; depends=[dplyr purrr Rcpp readr tibble tidyr xts zoo]; }; - sybil = derive2 { name="sybil"; version="2.1.1"; sha256="1hgxlwpb5libvv126vh01ngxqs8hlvll8xjgxw5xxhfbgsadfp1m"; depends=[lattice Matrix]; }; + sybil = derive2 { name="sybil"; version="2.1.2"; sha256="1nfhh696hrajmxg3z36rjgp7bmgsxiz7hpyz00y0w1qkjczbbph3"; depends=[lattice Matrix]; }; sybilDynFBA = derive2 { name="sybilDynFBA"; version="1.0.1"; sha256="1zyhvlzkcwnq3sh6gvi0v1crq94mr16bc5jnh0g9c8rbdl4v8r4x"; depends=[sybil]; }; sybilccFBA = derive2 { name="sybilccFBA"; version="2.0.0"; sha256="0x0is1a56jyahaba6dk9inj5v248m8n46f70ynqyqp1xpiax1fkr"; depends=[Matrix sybil]; }; sybilcycleFreeFlux = derive2 { name="sybilcycleFreeFlux"; version="2.0.0"; sha256="0p3w7ipyrqrh7nf52h8qmr4fikyinm8an7npmcb7kwjd59rcy554"; depends=[MASS Matrix sybil]; }; sylcount = derive2 { name="sylcount"; version="0.1-0"; sha256="1dxbqbjyvkg7cx234icby9fjdjz1z4l4crqd7kv8m05fv69pg224"; depends=[]; }; - sylly = derive2 { name="sylly"; version="0.1-4"; sha256="14lw5sxrdvidk0465a7x0jz74cvqjbqv0wlqdy78qzbq4ilcmcaa"; depends=[]; }; + syllabifyr = derive2 { name="syllabifyr"; version="0.1.0"; sha256="1pd5zjgcmpxg7xqhcljxck80pjs84ihhkr5bl4i8h2mc6xqmy1kf"; depends=[dplyr purrr stringr tibble tidyr]; }; + sylly = derive2 { name="sylly"; version="0.1-5"; sha256="01c7mpsk32kcsjyzzv52bn8bj28lqbmyhhfa1cwhphva5c5nkqwx"; depends=[]; }; sylly_en = derive2 { name="sylly.en"; version="0.1-3"; sha256="0jw48qin172vv7skcpvcpi9wzgav5l9afzb09hhgcxvivbz6dl93"; depends=[sylly]; }; - symDMatrix = derive2 { name="symDMatrix"; version="1.0.0"; sha256="0xss7f7hkrf2afchccfavymylfybnp9nxawqxd2vdjni95kbd595"; depends=[]; }; + sym_arma = derive2 { name="sym.arma"; version="1.0"; sha256="13fhmgzd50mwlnz9m6nnn4arr4jdqf5h7dgli5lk08da9wx6cy69"; depends=[]; }; + symDMatrix = derive2 { name="symDMatrix"; version="2.0.2"; sha256="1lf0yhid47107c2vnr4g7xz4hrjb2cgr5zpgik4xf5gypli6xh6x"; depends=[bit ff LinkedMatrix]; }; symbolicDA = derive2 { name="symbolicDA"; version="0.5-3"; sha256="1zbr8b19m3fnzx0bdajl86s6aijiycjdibf9q83wd6mgpq66jb85"; depends=[ade4 cluster clusterSim e1071 rgl shapes XML]; }; symbols = derive2 { name="symbols"; version="1.1"; sha256="1234rx3divhg60p0h0zn11viqn51fm6b8876m6rip2i6z8vrg319"; depends=[shape]; }; symmoments = derive2 { name="symmoments"; version="1.2"; sha256="074k0285c0yri39zags420kjls6kjlvlhymg3r7y24h42zdy82d4"; depends=[combinat cubature multipol mvtnorm]; }; synRNASeqNet = derive2 { name="synRNASeqNet"; version="1.0"; sha256="05ncwbv8kvvhqqrxa8qq7s0jc6krs5a56ph04z50iwgd91rzyi7x"; depends=[GenKern igraph KernSmooth parmigene]; }; synbreed = derive2 { name="synbreed"; version="0.12-9"; sha256="0h85z9bhzgsr783qx3zjqyi461a0q52wbqifwm3gc1kapl5irxhd"; depends=[abind BGLR doBy doParallel foreach igraph lattice LDheatmap MASS qtl regress]; }; synbreedData = derive2 { name="synbreedData"; version="1.5"; sha256="16wv9r7p0n8726qv0jlizmkvnrqwjj1q4xaxvfmj9611rm47vckx"; depends=[]; }; - synchronicity = derive2 { name="synchronicity"; version="1.3.4"; sha256="1km5hx82gy71m5nc6pkcksv0dn32fylhg2axpdsnarrxva14mgdg"; depends=[BH bigmemory_sri Rcpp uuid]; }; + synchronicity = derive2 { name="synchronicity"; version="1.3.5"; sha256="1kgsk64aifjm3mfj102y3va7x1abypq2zi0cqbnjhl8fqyzp69hx"; depends=[BH bigmemory_sri Rcpp uuid]; }; synchrony = derive2 { name="synchrony"; version="0.3.7"; sha256="0lnin4aphy1lq20bn7nsdj0ymy2xdwjzdj2f89xq0qwkc7w7b5jb"; depends=[]; }; synlik = derive2 { name="synlik"; version="0.1.2"; sha256="1pscfqg5x7wpq3vp1i7fy29dwa7cw5g3kzxinanwrwbcznv9nyms"; depends=[Matrix Rcpp RcppArmadillo]; }; - synthACS = derive2 { name="synthACS"; version="1.4.2"; sha256="069cqmp9whal7z490jh6my8fqmmc4d2mm693xi4lsci2afc5plzc"; depends=[acs data_table Rcpp]; }; - synthpop = derive2 { name="synthpop"; version="1.4-4"; sha256="1q3vmsagdaha97182cf3ak51rjx018h8c72zv9v6slf7h71a0d53"; depends=[classInt foreign ggplot2 lattice MASS nnet party plyr polspline proto randomForest rpart]; }; - sys = derive2 { name="sys"; version="1.5"; sha256="0yskm5mzps4435yvld9nfp6i5lqdy5ckpdwydvvbyjznz5yv01x2"; depends=[]; }; - sysfonts = derive2 { name="sysfonts"; version="0.7.2"; sha256="1jl66pyw9khi117523zanjjzdpnpgqdqx190w829xc4ljxzi8n55"; depends=[]; }; + synoptReg = derive2 { name="synoptReg"; version="0.1.0"; sha256="1d1341b2al6qjhdx2s2ww9lfr3pz7hxc9gv41vgvh4bw8pxcd48d"; depends=[fields maps ncdf4 raster zoo]; }; + synthpop = derive2 { name="synthpop"; version="1.5-0"; sha256="0p0dszrh66xzfaiks89qli23c8qzq8gvi4d7wwlngkmq4k8y80rq"; depends=[classInt foreign ggplot2 lattice MASS mipfp nnet party plyr polspline proto randomForest rpart]; }; + sys = derive2 { name="sys"; version="1.6"; sha256="16jkdfik3n7h1cjas7qgxkv9z1fv8mcsm0mx6jsfyj180bp2a49v"; depends=[]; }; + sysfonts = derive2 { name="sysfonts"; version="0.8"; sha256="0wng902plryf2d8fc7k7m3jx11acz51kb2d91cqbyhq7xpk06z43"; depends=[]; }; sysid = derive2 { name="sysid"; version="1.0.4"; sha256="0fr9gf5yjin3zvz850z4r4pqc1r4mwx8d46sl64i4csdm9qnqagy"; depends=[bitops ggplot2 polynom reshape2 signal tframe zoo]; }; systemfit = derive2 { name="systemfit"; version="1.1-22"; sha256="19nmhidnzyk2wcwi5v28n9lkvylfw4in63vg5naqlk3w4fbwm2wb"; depends=[car lmtest MASS Matrix sandwich]; }; systemicrisk = derive2 { name="systemicrisk"; version="0.4.1"; sha256="1zimkyj58lk3iq5x4g6a76dain65j36s8c8jhx25sqjr5z2zmfsr"; depends=[lpSolve Rcpp]; }; + syt = derive2 { name="syt"; version="0.1.0"; sha256="1qagd67wznyc6sfvs22lw2lwnwap1hlpf92i0ck5aif514ysi886"; depends=[Matrix partitions]; }; syuzhet = derive2 { name="syuzhet"; version="1.0.4"; sha256="0wf4rls7v7h7zkq2k550d16aqvaij27iim85cwif7dkbinajfngi"; depends=[dplyr dtt NLP textshape tidyr zoo]; }; tRophicPosition = derive2 { name="tRophicPosition"; version="0.7.5"; sha256="0qmkdsl0b2aw485vpbdqxdlfwg5a3i5bj4l67xv6h51fnbyfqfiz"; depends=[ArgumentCheck coda data_table ggplot2 gridExtra hdrcde MCMCglmm plyr rjags]; }; - taRifx = derive2 { name="taRifx"; version="1.0.6"; sha256="10kp06hkdx1qrzh2zs9mkrgcnn6d31cldjczmk5h9n98r34hmirx"; depends=[plyr reshape2]; }; + taRifx = derive2 { name="taRifx"; version="1.0.6.1"; sha256="1qnp2562irhb516jfapmpg4260172ckc8jc3vxfkjsj7dnr35j6l"; depends=[plyr reshape2]; }; tab = derive2 { name="tab"; version="3.1.2"; sha256="1vc5swfy9p3bsv5bqqgk4w81apzk6d0m1xz0cbhii7rpn7x6zh1h"; depends=[gee survey survival xtable]; }; taber = derive2 { name="taber"; version="0.1.0"; sha256="07a18kn65b4cxxf1z568n7adp6y3qx96nrff3a3714x241sd5p6i"; depends=[dplyr magrittr]; }; tablaxlsx = derive2 { name="tablaxlsx"; version="1.2.2"; sha256="1q7ap1dmymf3aj5g860794jfn9zrn3qiwwcdzl95lsbpkhgyspmz"; depends=[openxlsx]; }; - table1 = derive2 { name="table1"; version="1.0"; sha256="06cidli3k8cxzvnj1n6vysamkd3qsim2i6ly9fl7rwiyj4g64rw8"; depends=[Formula]; }; + table1 = derive2 { name="table1"; version="1.1"; sha256="01r6zlhv3d0ggniv6aaszmzqbappy9zycayiwwlknbwrgiwkp58z"; depends=[Formula htmltools knitr]; }; table1xls = derive2 { name="table1xls"; version="0.4.0"; sha256="0ixbshbp9hkcg12hj32vgb5bp0pj4rbc3i6g1xdg2zhqp7zanics"; depends=[XLConnect]; }; tableHTML = derive2 { name="tableHTML"; version="1.1.0"; sha256="0j2dk11h0dvibppyxjix4pxr6i9ji9ipzaizsr1fadrpk5xzawd5"; depends=[htmltools magrittr shiny]; }; tableMatrix = derive2 { name="tableMatrix"; version="0.82.0"; sha256="1sskijhbqakamrk2rv7v5zpjsdi8jw0jl2z96l0vhsvsiq0cz1c8"; depends=[data_table]; }; @@ -11929,84 +12448,93 @@ in with self; { tailDepFun = derive2 { name="tailDepFun"; version="1.0.0"; sha256="1z2jrzly1adiwi8y0pndyfggpr0li6sjv9rkrc5mi47s0qjvr5qj"; depends=[copula cubature mvtnorm SpatialExtremes]; }; tailloss = derive2 { name="tailloss"; version="1.0"; sha256="0lmjgjs6d94b70i10vx66fyvlxm5swwqbcjsnqa3lmldzz6m4jc1"; depends=[MASS]; }; tailr = derive2 { name="tailr"; version="0.1.2"; sha256="1z47akvm2y05ih8q5ci03jm29xzp4m52shvbm4d9h2bipnq5crys"; depends=[glue rlang]; }; + taipan = derive2 { name="taipan"; version="0.1.2"; sha256="192sy5pgq74vs31p7jfn6svdzf9mk9ybppzhp1rlki1bagmm5f1r"; depends=[shiny]; }; + takos = derive2 { name="takos"; version="0.1.0"; sha256="0a26jmxccpyk36sah9nz7pqpkc1rd9kbwrvwh0r0zp7lwvxbjb8w"; depends=[baseline broom colorRamps data_table devEMF MASS minpack_lm pracma segmented sfsmisc smoother]; }; tangram = derive2 { name="tangram"; version="0.4"; sha256="1yj5vwc8jkiic4zjag9k7w3j6dibqw5zsi78q6gssshsi9z0zbgy"; depends=[base64enc digest htmltools magrittr R6 stringi stringr]; }; + tatest = derive2 { name="tatest"; version="1.0"; sha256="1yd9pdpdhxwpllnj5wxa7ly29qiw8qywx9lx0w3nizczlx35fgjy"; depends=[]; }; tatoo = derive2 { name="tatoo"; version="1.1.0"; sha256="1dsycdp3vln1m1w3nhhrr60x8raw6gbihjpav0d4ad8qla2fq8nh"; depends=[assertthat colt crayon data_table magrittr openxlsx purrr rlang stringi withr]; }; tau = derive2 { name="tau"; version="0.0-20"; sha256="1inpqc2cz1vvjkmp8h3jpjvnvj0y5cwbbj92jlq0322w5w45vip9"; depends=[]; }; - tauturri = derive2 { name="tauturri"; version="0.1.1"; sha256="0v0p1avrx9vgnrli4zp6figm3s9265k9yny0acblbjlmz3z8smai"; depends=[httr magrittr plyr purrr tibble]; }; + tauturri = derive2 { name="tauturri"; version="0.3.0"; sha256="014301f5mzy6vblqzb61bxjv46kdynmmrxjpxyvk01w1k8wkwfcn"; depends=[httr magrittr plyr purrr tibble]; }; tawny = derive2 { name="tawny"; version="2.1.7"; sha256="1b2v0cgkmhzxy36dcdn6hnbqk6l5ac5c3myvwryf7wlp19xi786d"; depends=[futile_logger futile_matrix lambda_r lambda_tools PerformanceAnalytics quantmod tawny_types xts zoo]; }; tawny_types = derive2 { name="tawny.types"; version="1.1.5"; sha256="1vg0hv91dif6cfqfzrf7m1qbk57fp8v97fp88whwmvs83yd521hq"; depends=[futile_logger futile_options lambda_r lambda_tools quantmod xts zoo]; }; - taxa = derive2 { name="taxa"; version="0.2.1"; sha256="0jh3isjlh6bx9mdhavg1c43aayq1zl5jqx3x4690lwgvphnzl1dn"; depends=[crayon dplyr jsonlite knitr lazyeval magrittr R6 rlang stringr taxize tibble tidyr]; }; - taxize = derive2 { name="taxize"; version="0.9.3"; sha256="05llhgv6a440va80fs45r8q6865q45gi4z28b1ldcln0dmx77r7c"; depends=[ape bold crul data_table foreach httr jsonlite natserv plyr reshape2 ritis rotl rredlist stringr tibble wikitaxa worrms xml2 zoo]; }; + taxa = derive2 { name="taxa"; version="0.3.1"; sha256="19bfgcibryvvqsqyjw3jgiw4raraas82w1dhkmnv9j7jny3v2677"; depends=[crayon dplyr jsonlite knitr lazyeval magrittr R6 rlang stringr taxize tibble tidyr]; }; + taxize = derive2 { name="taxize"; version="0.9.4"; sha256="1p5rlc93q62rk2z3qcq02xfrs4pz699qdakk05pz6g9rlbqj342m"; depends=[ape bold crul data_table foreach httr jsonlite natserv plyr reshape2 ritis rotl rredlist stringr tibble wikitaxa worrms xml2 zoo]; }; taxizedb = derive2 { name="taxizedb"; version="0.1.4"; sha256="15gj9i18ysd83v9fidrrvw938dah04i10ahi3wh5dgjs5fd5ch2s"; depends=[curl DBI dbplyr dplyr hoardr magrittr RMySQL RPostgreSQL RSQLite]; }; taxlist = derive2 { name="taxlist"; version="0.1.5"; sha256="17b7sdjjzragi8k08304idic0p8cj095h4p9vlpfidn8k6csrkv8"; depends=[foreign stringdist taxize vegdata]; }; - taxonomizr = derive2 { name="taxonomizr"; version="0.2.2"; sha256="0drzsbr23kr3da6bawjrz8rl976mai0vcz19fr5aypsliqz32b41"; depends=[data_table R_utils RSQLite]; }; + taxonomizr = derive2 { name="taxonomizr"; version="0.5.1"; sha256="0a8knjyjs9w9nk9xmbny2hh5yfgmwmrj0d9wa58i28x6a7x54aq9"; depends=[data_table R_utils RSQLite]; }; + taxotools = derive2 { name="taxotools"; version="0.0.4"; sha256="0jvzyr476s21q1n9vylrpsahwqlyx1qalpaprf8kncv8407c1lwl"; depends=[taxize wikitaxa]; }; tbart = derive2 { name="tbart"; version="1.0"; sha256="0m8l9ic7na70il6r9ha0pyrjwznbgjq7gk5xwa5k9px4ysws29k5"; depends=[Rcpp sp]; }; tbdiag = derive2 { name="tbdiag"; version="0.1"; sha256="1wr2whgdk84426hb2pf8iiyradh9c61gyazvcrnbkgx2injkz65q"; depends=[]; }; tbl2xts = derive2 { name="tbl2xts"; version="0.1.2"; sha256="1zz310253s6gz0hzzldil5r03mm7ngvvnba7hxm8fm9dhfmvkbj6"; depends=[dplyr lazyeval PerformanceAnalytics xts zoo]; }; - tcR = derive2 { name="tcR"; version="2.2.1.11"; sha256="1wyxjwyba08m80g2c40sdg3d5brs3qmq8azb6vzwh2wmgqlb5400"; depends=[data_table dplyr ggplot2 gridExtra gtable igraph Rcpp reshape2 scales stringdist]; }; + tbrf = derive2 { name="tbrf"; version="0.1.0"; sha256="011p14jbgswbkb1habk09117a8aywzg8zzdaz0qmyr9icab7dpf1"; depends=[boot dplyr lubridate purrr rlang tibble tidyr]; }; + tcR = derive2 { name="tcR"; version="2.2.2"; sha256="0r44l47pyvj8zc0qa74y048yzjvwf7qrcf635cq656spmf1yszl0"; depends=[data_table dplyr ggplot2 gridExtra gtable igraph Rcpp reshape2 scales stringdist]; }; tcgsaseq = derive2 { name="tcgsaseq"; version="1.6.6"; sha256="0sk8fydhfx1c3mrir3qx8bqcif220l6ggzmlw9yw8faha210ak2y"; depends=[CompQuadForm ggplot2 GSA KernSmooth]; }; tcltk2 = derive2 { name="tcltk2"; version="1.2-11"; sha256="1ibxld379600xx7kiqq3fck083s8psry12859980218rnzikl65d"; depends=[]; }; tclust = derive2 { name="tclust"; version="1.4-1"; sha256="17md6l9v9dl9b72l84df01b52h2xiynbcjm437mv9mzcr09fc2sb"; depends=[]; }; tcpl = derive2 { name="tcpl"; version="1.4.3"; sha256="0b588in2xmdvybzfbbr0ik9mf0ls6k31nbrdpl7ijvxg2xfxfr1w"; depends=[data_table DBI numDeriv RColorBrewer RMySQL RSQLite]; }; tdROC = derive2 { name="tdROC"; version="1.0"; sha256="137j1m9pysjcz1gsfcym0438by3c7na21ccjlqf7xfccr1y8k2k6"; depends=[survival]; }; tdr = derive2 { name="tdr"; version="0.13"; sha256="0i0hnb3fc4d1mbbxcpzmyfh1w2rahfjabg5iyxym3yjd6377al15"; depends=[ggplot2 lattice RColorBrewer]; }; + tdsc = derive2 { name="tdsc"; version="1.0.0.1"; sha256="17nr5fa4f16ww8si8qikbqmixl38jxjy185b80ff2i5v4129mnwd"; depends=[data_table]; }; tdthap = derive2 { name="tdthap"; version="1.1-9"; sha256="0y01x0hcf0rw06cpn4pk17b0shf4v2c9was7vfs0zhsbq8qcwx7r"; depends=[]; }; tea = derive2 { name="tea"; version="1.0"; sha256="03wxhbgx17hl9bbzbfjmfa30q4fqszhs5y9imbp768fmzwbppn24"; depends=[eva]; }; teachingApps = derive2 { name="teachingApps"; version="1.0.4"; sha256="0wi25wdpkz7kh8r1s42wa9kiky8ilmcg8kgw0j1caygwg0bml2fa"; depends=[actuar BH d3heatmap data_table devtools diagram DiagrammeR dplyr DT dygraphs ggplot2 knitr leaflet magrittr markdown metricsgraphics miniUI networkD3 pacman plotly radarchart Rcpp RcppEigen RcppNumerical rprojroot scales shiny shinyAce shinydashboard shinythemes threejs tidyr visNetwork yaml]; }; teamcolors = derive2 { name="teamcolors"; version="0.0.1"; sha256="07mqsbhrsy23qc4j1w1wji36cbh6dijkp6p7g3598nlzhw7ln3aj"; depends=[]; }; teda = derive2 { name="teda"; version="0.1.1"; sha256="0yx469jbkw9cgx73zi5mkykrdn16kn01zh524x9411314aa32avx"; depends=[]; }; teigen = derive2 { name="teigen"; version="2.2.2"; sha256="1k5k3lj6av5pyx130w1j7avd0jdmm12ryc71mi5mq49sp95ndl4v"; depends=[]; }; + telefit = derive2 { name="telefit"; version="1.0.0"; sha256="1g54alrkigbrcf9p7np4cbzdzn3hjch70wvv5d0qxrj1xbbz0rgg"; depends=[abind coda cowplot doRNG dplyr fields foreach ggplot2 gtable itertools mvtnorm raster Rcpp RcppArmadillo RcppEigen reshape2 scales scoringRules SDMTools sp stringr]; }; telegram = derive2 { name="telegram"; version="0.6.0"; sha256="02wwa115f0vz2d9y4nf01397hjkpc3cv2gdl47snrajrm41gji7y"; depends=[curl httr jsonlite R6]; }; telegram_bot = derive2 { name="telegram.bot"; version="1.0.0"; sha256="10i126wa5dbpzxvr8f9zysfwg53051sk9cjdpdrjva1p3yvyn143"; depends=[httr R6 telegram]; }; tempR = derive2 { name="tempR"; version="0.9.9.15"; sha256="00xxrwzbqcsvb50xcrr4aii4fjcfa8bc25jn0zvg4dxmww8w4s1r"; depends=[]; }; tempcyclesdata = derive2 { name="tempcyclesdata"; version="1.0.1"; sha256="0hciachv59kjpjs119r4z24jskzgnassi1yjg3cgl2r0hyglxxc3"; depends=[]; }; tempdisagg = derive2 { name="tempdisagg"; version="0.25.0"; sha256="0zi11jqb3i5kd2z1bbkz8y7g16kmkcn3xpkwj2brv0s86wxwsny7"; depends=[]; }; - temperatureresponse = derive2 { name="temperatureresponse"; version="0.1"; sha256="0q2x09cyy4zacbgmnwd43h1rwv2g3f2rk9cbg2phsvgxqx9vfm24"; depends=[AICcmodavg broom dplyr minpack_lm nlme numDeriv rootSolve tidyr]; }; templates = derive2 { name="templates"; version="0.3.0"; sha256="0xnzj3cvhw1r7zfqaijbfdyclka61jwixcdh05a5z9qwgv0076sh"; depends=[dat magrittr stringr]; }; tensor = derive2 { name="tensor"; version="1.5"; sha256="19mfsgr6vz4lgwidm80i4yw0y1dr3n8i6qz7g4n2xa0k74zc5pp1"; depends=[]; }; - tensorA = derive2 { name="tensorA"; version="0.36"; sha256="1xpczn94a6vfkfibfvr71a7wccksg16pc22h0inpafna4qpygcwp"; depends=[]; }; + tensorA = derive2 { name="tensorA"; version="0.36.1"; sha256="176hjy3bvg3in62r97wxbhq187sjz6c1gwy9x6spaxl6k4my3zy7"; depends=[]; }; + tensorBF = derive2 { name="tensorBF"; version="1.0.2"; sha256="1dw1a6xqcsl4isbzbfiplgqq5nak5n9ffzm23mzzmkh1r1a8kl1y"; depends=[tensor]; }; tensorBSS = derive2 { name="tensorBSS"; version="0.3.4"; sha256="0wh14qy7fa7klb7yy272d16cvgfgnrf25wba3bqbpral9pv5nkmv"; depends=[ICtest JADE Rcpp RcppArmadillo tensor tsBSS]; }; - tensorflow = derive2 { name="tensorflow"; version="1.8"; sha256="1ixli2m7lbkp5pv7a8waxvhi04l41dcrrplzgdyzqi3ifaarr2sk"; depends=[config jsonlite processx reticulate rstudioapi tfruns yaml]; }; + tensorflow = derive2 { name="tensorflow"; version="1.9"; sha256="0g346xzjkq7bsbdchcp6k5lzx7242vamf1zj0clgmpidqz4afhf3"; depends=[config jsonlite processx reticulate rstudioapi tfruns yaml]; }; tensorr = derive2 { name="tensorr"; version="0.1.0"; sha256="00zqklz3hqjv20giwqnd1d62x5hdm620hfdkn1x75i87dv92qn8m"; depends=[assertive_base assertive_properties assertive_types Matrix purrr]; }; - tensr = derive2 { name="tensr"; version="1.0.0"; sha256="05gclhljflkz98hgiq5bgbqjz8icxbdq6b84bn2995cx7v0x85ds"; depends=[]; }; - tergm = derive2 { name="tergm"; version="3.4.1"; sha256="10sanqbnqdyqafjjcwm99zfnpgrv18z4y2rgaq5wqq7nni184hfm"; depends=[coda ergm MASS network networkDynamic nlme robustbase statnet_common]; }; - tesseract = derive2 { name="tesseract"; version="2.1"; sha256="11v4z79sdrms5in5qvg5c6bvf2lynibwzpi7ficf7w240nq23d15"; depends=[curl digest pdftools rappdirs Rcpp tibble]; }; + tensr = derive2 { name="tensr"; version="1.0.1"; sha256="1z6b3ra7fgn88mxbhsq65x3frj5j7p17n119s9kbw7sg9y633vfx"; depends=[assertthat]; }; + tergm = derive2 { name="tergm"; version="3.5.2"; sha256="0p7qcr59p6n7snzspv02m8gn26rgk3rp2hxilmp5jailk43zid35"; depends=[coda ergm MASS network networkDynamic nlme robustbase statnet_common]; }; + tesseract = derive2 { name="tesseract"; version="2.3"; sha256="14v6ac0p6nc76ks1vkrcz74lpmib7hrp5m6gw4vh6pl68cwmd0y6"; depends=[curl digest pdftools rappdirs Rcpp tibble]; }; + testDriveR = derive2 { name="testDriveR"; version="0.4.0"; sha256="1ri5wa0qab3mn921vycxrmzhs0g95dsdj1vxvcr5a999wggwabak"; depends=[]; }; testassay = derive2 { name="testassay"; version="0.1.0"; sha256="06gks3k04m45kn946i525261v33ymwxpvgdy84kc7sp01xxx4rfv"; depends=[]; }; tester = derive2 { name="tester"; version="0.1.7"; sha256="1x5m43abk3x3fvb2yrb1xwa7rb4jxl8wjrnkyd899ii1kh8lbimr"; depends=[]; }; testforDEP = derive2 { name="testforDEP"; version="0.2.0"; sha256="1mgzhj8b35r5cm4bl0nnyxj0h7rwd28d17qvgvaky2kvm2r83cf9"; depends=[Hmisc minerva Rcpp]; }; testit = derive2 { name="testit"; version="0.8"; sha256="1xwpimphcv23ps824s6s77y9w8xww0imm22qmgs61bifjsfc3a88"; depends=[]; }; - testthat = derive2 { name="testthat"; version="2.0.0"; sha256="155l53kb69jga5d8c5nvdwqlvlgfmk4vzyyl4d0108j53jnlgh1v"; depends=[cli crayon digest magrittr praise R6 rlang withr]; }; - testthis = derive2 { name="testthis"; version="1.0.3"; sha256="1q42nhp4nsazn31lxymb3zfj928ygbiv6jy7f0j4m3p02w2hqz5n"; depends=[assertthat devtools magrittr rprojroot stringi testthat usethis]; }; + testthat = derive2 { name="testthat"; version="2.0.1"; sha256="1cafy5xsjx6m08s45456mjsal7mfxzwpbrds0p4z3gwam948gpzy"; depends=[cli crayon digest magrittr praise R6 rlang withr]; }; + testthis = derive2 { name="testthis"; version="1.0.4"; sha256="1gdfpxrgk801ai98mla7hczsa4m85wqsjbc3xk7ngq0dd0knz2j3"; depends=[assertthat devtools magrittr pkgload stringi testthat usethis]; }; tetraclasse = derive2 { name="tetraclasse"; version="0.1.21"; sha256="1cl2cah0xi6x3rvvdy56iszai6rkbxc1w3x13v0l1z1nryff7c6a"; depends=[dplyr FactoMineR ggplot2 ggrepel magrittr reshape2 tibble tidyr]; }; - texPreview = derive2 { name="texPreview"; version="1.1.4"; sha256="1xix13vh3haganyb67rrmrsy2nsk053wq83y9ky99wk5gmxpjmxf"; depends=[base64enc htmltools magick rstudioapi svgPanZoom xml2]; }; - texmex = derive2 { name="texmex"; version="2.4"; sha256="0s3x681f1qnbgmzi5iwqpmkfzpx9gsccd3q1vz1dppzq8fbid3c2"; depends=[ggplot2 mvtnorm]; }; + texPreview = derive2 { name="texPreview"; version="1.2.3"; sha256="0yl8y94jc6b23nmby2ff52yzgx95xma4bzd3w46az7b6pg7a2bxb"; depends=[base64enc htmltools magick rematch2 rstudioapi svgPanZoom whisker xml2]; }; + texmex = derive2 { name="texmex"; version="2.4.2"; sha256="01qx4f5f0gf0xz85lzxxv79fp7syd7x484iw711rbnv0nw3aqwa2"; depends=[ggplot2 mvtnorm Rcpp]; }; texreg = derive2 { name="texreg"; version="1.36.23"; sha256="0yxaqimd7cyfrfpia6fnqm15lgs0bf5zyjzmnfm1v4qmf8kj8x6v"; depends=[]; }; text2vec = derive2 { name="text2vec"; version="0.5.1"; sha256="0vcp50mgpgxbf534vd8l56m8006i3sh8a4v9nrf9vxkq2pv7xygc"; depends=[data_table digest foreach futile_logger irlba Matrix mlapi R6 Rcpp RcppParallel sparsepp stringi]; }; - textTinyR = derive2 { name="textTinyR"; version="1.1.1"; sha256="0i35mfvrqz524089zysd1dyhfk6ndr1azxps01vls9rvgyw9452i"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; }; + textTinyR = derive2 { name="textTinyR"; version="1.1.2"; sha256="177m3mh61isjk9svbnv5gdlpyfy7fdmafi2znxh2m7fqcwn7k3af"; depends=[BH data_table Matrix R6 Rcpp RcppArmadillo]; }; textcat = derive2 { name="textcat"; version="1.0-5"; sha256="039bzyz4jvh1hl2a2pfp328kr2mpb1a07j79yqf5cbqk3d5a197b"; depends=[slam tau]; }; - textclean = derive2 { name="textclean"; version="0.9.2"; sha256="1xf5krbc8nr0yk63mcdlzbn3r58m4l4wgxhp54bahvn0ff8cwsjb"; depends=[data_table english glue lexicon mgsub qdapRegex stringi textshape]; }; + textclean = derive2 { name="textclean"; version="0.9.3"; sha256="0kgjh6c4f14qkjc4fds7q7rpf4nkma3p0igm54fplmm3p853nvrz"; depends=[data_table english glue lexicon mgsub qdapRegex stringi textshape]; }; texteffect = derive2 { name="texteffect"; version="0.1"; sha256="0fwcbz7bpynvcivac16z77j8d398bf7vl4l8sppi9yvg72l0k94w"; depends=[boot ggplot2 MASS]; }; textfeatures = derive2 { name="textfeatures"; version="0.1.1"; sha256="0pcs3nax21npb5blbwrmzl7q85ya8n7vgjn83z2abjr80gj3f5lj"; depends=[dplyr rlang tibble]; }; textgRid = derive2 { name="textgRid"; version="1.0.1"; sha256="1wi5vq5f7ixhz39l5hqi2jlmjjacx4lyrs4h8xfbd47pj6g16lc6"; depends=[]; }; textile = derive2 { name="textile"; version="0.1.2"; sha256="067zli6sl7bp9843spgx47hmw55aq61yinqw1lqifmrpk7b0ywk5"; depends=[]; }; textir = derive2 { name="textir"; version="2.0-5"; sha256="0ban5qiinlxizqpcgafv4b5gwxlil6jdfarjd6l1m48awxh3mlnb"; depends=[distrom gamlr Matrix]; }; - textmineR = derive2 { name="textmineR"; version="2.1.2"; sha256="1lhk4ix8h138vrn2l1ivcwgv2d9i7xgccn7c6h6gxxc5dpzwdsyk"; depends=[lda Matrix Rcpp RcppArmadillo RcppProgress RSpectra SnowballC stringr text2vec tm topicmodels]; }; + textmineR = derive2 { name="textmineR"; version="2.1.3"; sha256="120zhg63q09m1fs08kivw15scvy2dc66xc9f1vrd4vgx8wlgn70b"; depends=[lda Matrix Rcpp RcppArmadillo RcppProgress RSpectra SnowballC stringr text2vec tm]; }; textmining = derive2 { name="textmining"; version="0.0.1"; sha256="16wiykhrjs4djwa7q2wm4g8b3mrhh6hq9d9876w1j7c2s6zx69gd"; depends=[caret dplyr koRpus mallet networkD3 NLP rJava slam SnowballC stylo tm topicmodels wordcloud]; }; textometry = derive2 { name="textometry"; version="0.1.4"; sha256="17k3v9r5d5yqgp25bz69pj6sw2j55dxdchq63wljxqkhcwxyy9lh"; depends=[]; }; textrank = derive2 { name="textrank"; version="0.2.0"; sha256="0s2mnid3dha3nyyc9abhb36vlij4bg0024i9ay4pvvy4l1x947gr"; depends=[data_table digest igraph]; }; - textreadr = derive2 { name="textreadr"; version="0.7.0"; sha256="081lqqclx2dlrv341178dagd5zajndf27lbrkrv78668cdfk58xr"; depends=[antiword curl data_table pdftools readxl rvest striprtf textshape xml2]; }; - textreg = derive2 { name="textreg"; version="0.1.4"; sha256="0k7hpvvhacz29d3mvnygg6rqmh9f3ghkcp7kjmvv9jnr2ipw2j21"; depends=[NLP Rcpp tm]; }; + textreadr = derive2 { name="textreadr"; version="0.9.0"; sha256="04nyjrfxgwq8g3bdj12nnkia2xn2zngk1rprlkpyicrisgq36agk"; depends=[antiword curl data_table pdftools readxl rvest striprtf textshape xml2]; }; + textreg = derive2 { name="textreg"; version="0.1.5"; sha256="0h44z5hyndnvzd9axix7gpmhbdx347dfgxw9r8w38kyw6dklbjy6"; depends=[NLP Rcpp tm]; }; textreuse = derive2 { name="textreuse"; version="0.1.4"; sha256="0qfp7ffzb5p3k3wiw8i1zjskni8f38rzkjnss97j9f3vhhb8j4r7"; depends=[assertthat BH digest dplyr NLP Rcpp RcppProgress stringr tidyr]; }; textshape = derive2 { name="textshape"; version="1.6.0"; sha256="1pl85wjq5rl25gdlh4cp0l14hn76rrmpl7l1fn7kq9lwj9yfpcs8"; depends=[data_table slam stringi]; }; textstem = derive2 { name="textstem"; version="0.1.4"; sha256="1pbhi5ia3w16vsix2x3if51zd2v9bcv0j4lj9hfikgq1yz9zxmw2"; depends=[dplyr hunspell koRpus koRpus_lang_en lexicon quanteda SnowballC stringi textclean textshape]; }; - textutils = derive2 { name="textutils"; version="0.1-6"; sha256="0xvsd6pfg4kv40l14xcvmirqiq8rmky4s8v8diagzri3a7i45nqn"; depends=[]; }; - tfdatasets = derive2 { name="tfdatasets"; version="1.5"; sha256="1ik6rzfnjmm54m7s2rvp1bq5jk0k2vl631bz3db3dk639jndiz6a"; depends=[magrittr reticulate rlang tensorflow tidyselect]; }; + textutils = derive2 { name="textutils"; version="0.1-9"; sha256="13fy5krm8giprw0jjdws8p4c5fra6r4vhbyzpf5aksacy125j66y"; depends=[]; }; + tfdatasets = derive2 { name="tfdatasets"; version="1.9"; sha256="1djq3ywkzbnmmfr3fbdi6pg4sapqjh53dm2p5bil8f41maak12b7"; depends=[magrittr reticulate rlang tensorflow tidyselect]; }; tfer = derive2 { name="tfer"; version="1.1"; sha256="19d31hkxs6dc4hvj5495a3kmydm29mhp9b2wp65mmig5c82cl9ck"; depends=[]; }; - tfestimators = derive2 { name="tfestimators"; version="1.5"; sha256="069j6d5i19yc3nhxrrzwzassv4fv3bdhygxvqqc49nndyf5vwwbj"; depends=[magrittr progress purrr reticulate rlang tensorflow tfruns tibble tidyr tidyselect]; }; + tfestimators = derive2 { name="tfestimators"; version="1.9.0"; sha256="0yfnwiszxypzinzl2qzbl317lm1xfshg4228c7h6z8im5da59x9p"; depends=[magrittr progress purrr reticulate rlang tensorflow tfruns tibble tidyr tidyselect]; }; tfplot = derive2 { name="tfplot"; version="2015.12-1"; sha256="1x007j6ibbzfr0kncvsr4c7295jv3c4amg2dpyjvdir9h665nc23"; depends=[tframe]; }; tframe = derive2 { name="tframe"; version="2015.12-1"; sha256="0k0favda3z6zdg7ykc2nnl28gxz7sfzbyr5pcifiyi984pa2zgfx"; depends=[]; }; tframePlus = derive2 { name="tframePlus"; version="2016.7-1"; sha256="12xi2xw4pr78n3cppfknpxmjp2263pb4kqj9v412yxwp82rgb6yk"; depends=[tframe timeSeries]; }; - tfruns = derive2 { name="tfruns"; version="1.3"; sha256="02ib3k3jsmskk5cdxl2nyvnvpn7nlkgjb353z7qlwal0fgrssaln"; depends=[base64enc config jsonlite magrittr reticulate rlang rstudioapi tidyselect whisker yaml]; }; + tfruns = derive2 { name="tfruns"; version="1.4"; sha256="1mqv5m13qm1dqz0622jd5ayb3nk76lfa657y2hyqv261flxizhvg"; depends=[base64enc config jsonlite magrittr reticulate rlang rstudioapi tidyselect whisker yaml]; }; + tfse = derive2 { name="tfse"; version="0.4.2"; sha256="06d2v69xcikzilbc1hkl1hw54r3sjng7mgiswyg0san50swgs7l2"; depends=[]; }; tgcd = derive2 { name="tgcd"; version="2.0"; sha256="1553f464jpmngdj8fmbjn9cpmrcp4ysgsfx4w7q4pm4csslsqvlr"; depends=[]; }; tggd = derive2 { name="tggd"; version="0.1.1"; sha256="1izar1b3w148vp2r8gv3vpwfndib8ilxcjxgbfzbxn7q5mr73mwa"; depends=[gsl]; }; tgp = derive2 { name="tgp"; version="2.4-14"; sha256="1l3kssjkh5sbrh75qdpmynjfnidgz8vmzq1jml1qm1yfwval8ak1"; depends=[maptree]; }; @@ -12018,34 +12546,40 @@ in with self; { thgenetics = derive2 { name="thgenetics"; version="0.4-2"; sha256="1314gry3xs9v4jy13g08q16qy4ax3s0bc7d74gi0wbpkgdrk3lql"; depends=[]; }; thief = derive2 { name="thief"; version="0.3"; sha256="12ymkkisg5p0g1gmvlczhp4dc7mirjg55fqqmz2d90673vlg6rfq"; depends=[forecast ggplot2 hts]; }; thinkr = derive2 { name="thinkr"; version="0.13"; sha256="1j43mjznriq8d5ki50rb41vgmzj2gq8sahvhj11742ggxd0bzvdb"; depends=[assertthat devtools dplyr ggplot2 lazyeval lubridate magrittr officer rvg stringi stringr tidyr]; }; + thor = derive2 { name="thor"; version="1.0.1"; sha256="02yyn8sp2s8qhxhwhc4f4921014c5q70b5x2r00jbqlwg069szj2"; depends=[R6 storr]; }; threeboost = derive2 { name="threeboost"; version="1.1"; sha256="033vwn42ys81w6z90w5ii41xfihjilk61vdnsgap269l9l0c8gmn"; depends=[Matrix]; }; threejs = derive2 { name="threejs"; version="0.3.1"; sha256="1s3rdlzy7man6177ycayg6xsh6k8y1r9rdj9yzn3b93j2rs0nxbi"; depends=[base64enc crosstalk htmlwidgets igraph]; }; threewords = derive2 { name="threewords"; version="0.1.0"; sha256="083y5i4qyl1wj017wy5ywl2yx9wvrpjl9g9k9clvnrbwzbycx2cg"; depends=[httr]; }; threg = derive2 { name="threg"; version="1.0.3"; sha256="1ja0w4hhdkw3b1cipbpw8ym27k5lh2m7gibd74mj6gij7rpixrnb"; depends=[Formula survival]; }; thregI = derive2 { name="thregI"; version="1.0.4"; sha256="0zddd32fnfi98zwq08akkvhkg3c66sj3jii6ap8p1m9a0wg2k2k3"; depends=[Formula survival]; }; threshr = derive2 { name="threshr"; version="1.0.0"; sha256="1zrhmqpz3k2gyddrzg96yyyc1jffj3aic2dmbidxxc97b9g5hi53"; depends=[revdbayes rust]; }; + thriftr = derive2 { name="thriftr"; version="1.0.3"; sha256="08d9xi0czy8ci0aci75prjvfhpkmdw23qvcviap9kz2hr9x23183"; depends=[R6 rly stringi]; }; thsls = derive2 { name="thsls"; version="0.1"; sha256="18z7apskydkg7iqrs2hgnzby578qsvyd73wx8v4z3aa338lssdi7"; depends=[Formula]; }; tibble = derive2 { name="tibble"; version="1.4.2"; sha256="05svbjkm1xqv56ybjgsqqg2pp8nn6hams1yxcr8aanbhzx9h6rqi"; depends=[cli crayon pillar rlang]; }; tibbletime = derive2 { name="tibbletime"; version="0.1.1"; sha256="15rp66p4pgiv7fd0rx1pzqlpsg4i4j5j368cwqm1mf1m4xknz6yy"; depends=[assertthat dplyr glue hms lubridate purrr Rcpp rlang tibble zoo]; }; tibbrConnector = derive2 { name="tibbrConnector"; version="1.5.1"; sha256="1r58myi7x4hqqvyrphxy4ppa1lnad6x2ginfq2j52ax53zr07ajp"; depends=[RCurl rjson]; }; tictactoe = derive2 { name="tictactoe"; version="0.2.2"; sha256="1fx8plj5zr04xwk5hfj3zqhcknidxlzya2q14cf0m3y33a86lx42"; depends=[hash]; }; tictoc = derive2 { name="tictoc"; version="1.0"; sha256="1zp2n8k2ax2jjw89dsri268asmm5ry3ijf32wbca5ji231y0knj7"; depends=[]; }; - tidyLPA = derive2 { name="tidyLPA"; version="0.1.3"; sha256="1yk9abn21ycfdr1h43shjaymga5j9z862mp1zbwj2wbxxv6m5pp7"; depends=[dplyr forcats ggplot2 magrittr mclust purrr readr rlang stringr tibble tidyr]; }; - tidyRSS = derive2 { name="tidyRSS"; version="1.2.4"; sha256="0dvpaawwm6jbwxiilxllzmifjwx9spbl57jmi8lkcq948abn84vg"; depends=[dplyr httr jsonlite lubridate magrittr purrr sf stringr testthat tibble xml2]; }; + tidyLPA = derive2 { name="tidyLPA"; version="0.2.2"; sha256="0z9yh4wa9mzly5g3jkqap70zh7l3s2xzgjjrhzyvshd82g1bs7ac"; depends=[dplyr forcats ggplot2 magrittr mclust purrr readr rlang stringr tibble tidyr]; }; + tidyRSS = derive2 { name="tidyRSS"; version="1.2.6"; sha256="1kwc0bnpz4gi05j2yz6c4r30jhd1dvcqcpajaxlmnwnblpcp033f"; depends=[dplyr httr jsonlite lubridate magrittr purrr sf stringr testthat tibble xml2]; }; + tidybayes = derive2 { name="tidybayes"; version="1.0.3"; sha256="1dkkzfbbq94vrrswf3g6dcds4vpvjn2kldf91f7642qf6kdgy135"; depends=[arrayhelpers coda dplyr forcats ggplot2 ggridges ggstance HDInterval LaplacesDemon magrittr MASS plyr purrr rlang stringi stringr tibble tidyr tidyselect]; }; tidyboot = derive2 { name="tidyboot"; version="0.1.1"; sha256="0nss1ci763g9p5f33g163ppamx72axc8xhrils0cql3ka8439pmn"; depends=[dplyr modelr purrr rlang tidyr]; }; - tidycensus = derive2 { name="tidycensus"; version="0.4.6"; sha256="1czfdwm5bn0xpqm43mvb5bd30m5kdxikaq21gxkj41r78z69qncl"; depends=[dplyr httr jsonlite purrr rappdirs readr rvest sf stringr tidyr tigris units xml2]; }; + tidycensus = derive2 { name="tidycensus"; version="0.8.1"; sha256="1xw3r53wy3sy8rc08nprs4xfxplq6h1gmy1lhcwi8db922nyb671"; depends=[dplyr httr jsonlite purrr rappdirs readr rvest sf stringr tidyr tigris units xml2]; }; tidygenomics = derive2 { name="tidygenomics"; version="0.1.0"; sha256="0n6km2zhdmbgacn6rzamrn506d9y3sl6yp2q6fd9x7kzgz09aq4n"; depends=[dplyr fuzzyjoin IRanges purrr Rcpp tidyr]; }; tidygraph = derive2 { name="tidygraph"; version="1.1.0"; sha256="1cqmii1pia5s8cj1hfm5jh4qgg9dn65dcb666bqfhq51nzgwy6b4"; depends=[dplyr igraph magrittr R6 Rcpp rlang tibble tidyr]; }; - tidyhydat = derive2 { name="tidyhydat"; version="0.3.4"; sha256="03kjcvh6g6xwd72fm8yyflyy72zm6fd8d0rlb6wabzq7hbzhfpp0"; depends=[cli crayon DBI dbplyr dplyr httr lubridate rappdirs readr rlang RSQLite tidyr]; }; + tidyhydat = derive2 { name="tidyhydat"; version="0.3.5"; sha256="1b82pxkn54kil661hkc5dp52nkl4sdbc0qr835ax1j00ix4hzi0b"; depends=[cli crayon DBI dbplyr dplyr httr lubridate rappdirs readr rlang RSQLite tidyr]; }; tidyimpute = derive2 { name="tidyimpute"; version="0.1.0"; sha256="03b475nn206hxq3i0n7j1qws82rwwk5vqivmdg5mff44dvz4gl5s"; depends=[dplyr na_tools rlang]; }; + tidymodels = derive2 { name="tidymodels"; version="0.0.1"; sha256="1ijl9hkdnqiszzgnm7bk8mq34anm6xqwa1hv3q9kh3iwph9mi10c"; depends=[broom cli crayon dplyr ggplot2 infer magrittr pillar purrr recipes rlang rsample rstudioapi tibble tidyposterior tidypredict tidytext yardstick]; }; tidyposterior = derive2 { name="tidyposterior"; version="0.0.1"; sha256="09q2j6kjwqphdzi60w26mlax9fnmndw7s3fsxfcj0pjjl8688w52"; depends=[broom dplyr ggplot2 purrr rlang rsample rstanarm tibble tidyr]; }; tidypredict = derive2 { name="tidypredict"; version="0.2.0"; sha256="1hq9xzaa234679qvf02nc5w8l21yh1f3dhl76zxzqc7na7chn13k"; depends=[dplyr purrr rlang tibble tidyr]; }; tidyquant = derive2 { name="tidyquant"; version="0.5.5"; sha256="0kh3y291j5d6qbqr45jjzjpwa02r0ymb7gdr0zd9g3d4czllwv95"; depends=[dplyr ggplot2 httr lazyeval lubridate magrittr PerformanceAnalytics purrr Quandl quantmod rlang stringr tibble tidyr tidyverse timetk TTR xml2 xts]; }; - tidyr = derive2 { name="tidyr"; version="0.8.1"; sha256="0485f19mkkglc4bv57y6bm6l9rfgd878hsz2xdg1nwgbqchjhgix"; depends=[dplyr glue magrittr purrr Rcpp rlang stringi tibble tidyselect]; }; - tidyselect = derive2 { name="tidyselect"; version="0.2.4"; sha256="1592dbzawhd1hpsp9919l4sifyiaaj6xr7lnhsbwa6jwmmb0xcsw"; depends=[glue purrr Rcpp rlang]; }; + tidyr = derive2 { name="tidyr"; version="0.8.2"; sha256="03s9dv6c2dj65a769h8fgy9878y46rdq7x65i53kd44kag80i9cr"; depends=[dplyr glue magrittr purrr Rcpp rlang stringi tibble tidyselect]; }; + tidyselect = derive2 { name="tidyselect"; version="0.2.5"; sha256="0x3cp36byhfjajikr1lwffjm85ayw3bcs7d7kb0cydgs61ifiqjw"; depends=[glue purrr Rcpp rlang]; }; tidystats = derive2 { name="tidystats"; version="0.2"; sha256="15f12zizgql1y303pr4vhmvpmpxib0wpybd0b5gbx281iglpdsc0"; depends=[dplyr knitr magrittr purrr readr stringr tibble tidyr]; }; tidystringdist = derive2 { name="tidystringdist"; version="0.1.2"; sha256="1jk5yqkjf33arbbfgfzk7ym943gy95n3yncybmvwbjsff07qpmaw"; depends=[attempt dplyr magrittr purrr rlang stringdist]; }; - tidytext = derive2 { name="tidytext"; version="0.1.9"; sha256="1hkxg23cc44496w8nvrm1zsbk05fhk423k12ss6ay2da3n8khi0f"; depends=[broom dplyr hunspell janeaustenr Matrix purrr rlang stopwords stringr tokenizers]; }; + tidytext = derive2 { name="tidytext"; version="0.2.0"; sha256="15xyn7mz81cm6dqsjvdb681q2sag9pp62kv11y0blyxd81wpy994"; depends=[broom dplyr hunspell janeaustenr Matrix purrr rlang stopwords stringr tokenizers]; }; + tidytidbits = derive2 { name="tidytidbits"; version="0.1.0"; sha256="154k3gn87fnmzhldyp7h0rq5gxpndwaf4gahqydhsh9i6dq61lk7"; depends=[dplyr extrafont forcats magrittr purrr rlang stringr tibble tidyr tidyselect]; }; + tidytransit = derive2 { name="tidytransit"; version="0.3.5"; sha256="0pxkn162i601lc8lwci1j4ns44yxc1d7zy7c7423ccqjpj85nm7g"; depends=[assertthat dplyr here htmltools httr lubridate magrittr readr rlang scales sf stringr tibble tidyr zip]; }; tidytree = derive2 { name="tidytree"; version="0.1.9"; sha256="0bxgmwamiclr4fnn5dk7hnkl7jf4p1fgwga2gfa3a6lwa79qgpwn"; depends=[ape dplyr lazyeval magrittr tibble]; }; tidyverse = derive2 { name="tidyverse"; version="1.2.1"; sha256="0yy3fkjksgcn6wkbgsb0pbnmsyqs4m01mziqafhig578nixs4rxd"; depends=[broom cli crayon dbplyr dplyr forcats ggplot2 haven hms httr jsonlite lubridate magrittr modelr purrr readr readxl reprex rlang rstudioapi rvest stringr tibble tidyr xml2]; }; tidyxl = derive2 { name="tidyxl"; version="1.0.3"; sha256="02icd5xwyimdlzrn6ikj6rrs3kj3qw1ngap69cf89mvmlkp93y79"; depends=[piton Rcpp]; }; @@ -12053,7 +12587,7 @@ in with self; { tiger = derive2 { name="tiger"; version="0.2.3.1"; sha256="0xr56c46b956yiwkili6vp8rhk885pcmfyd3j0rr4h8sz085md6n"; depends=[e1071 hexbin klaR lattice qualV som]; }; tigerhitteR = derive2 { name="tigerhitteR"; version="1.1.0"; sha256="0inyi12lf8bn7nbklf2rjixk6wrgrjcp8njv7knai4dgvv7v0rfa"; depends=[Hmisc magrittr openxlsx zoo]; }; tigerstats = derive2 { name="tigerstats"; version="0.3"; sha256="12wrghipgypkhwwkmaxb6n0qx9fgxk82dc6wlh56rblsvciv2hj0"; depends=[abd ggplot2 lattice manipulate MASS mosaic mosaicData]; }; - tigger = derive2 { name="tigger"; version="0.2.11"; sha256="1kbqlfr3lsiiv0l7dzahna706zb4mx0gfx91220n2ckfc81pyrv5"; depends=[alakazam doParallel dplyr foreach ggplot2 iterators lazyeval tidyr]; }; + tigger = derive2 { name="tigger"; version="0.3.1"; sha256="1ay8al764adpzabwsinxg97y2mz28k6y1m8ckfxhi9h11az23hid"; depends=[alakazam doParallel dplyr foreach ggplot2 gridExtra gtools iterators lazyeval rlang shazam stringi tidyr]; }; tightClust = derive2 { name="tightClust"; version="1.1"; sha256="0vqkp2g6z8y3b6dhzglmacjhf2qi1sg80kb941mwfafin2k40zbm"; depends=[]; }; tigreBrowserWriter = derive2 { name="tigreBrowserWriter"; version="0.1.5"; sha256="0izgx1khci6qc6pz85dxj75kzxvpr30l0vhcv9476jrcbwqs4k8m"; depends=[DBI RSQLite]; }; tigris = derive2 { name="tigris"; version="0.7"; sha256="0azfp8ahf63a10862669wsamf0270rcyrmknc331vjs52b3qlrvl"; depends=[dplyr httr magrittr maptools rappdirs rgdal sf sp stringr uuid]; }; @@ -12074,8 +12608,8 @@ in with self; { timeordered = derive2 { name="timeordered"; version="0.9.9"; sha256="0rfga5i6kckmlz2dzqb1pp634dl93wxp7v3kisxlbjl7mgnbck3k"; depends=[igraph plyr]; }; timereg = derive2 { name="timereg"; version="1.9.2"; sha256="0ddckk8vrfkk4kwlrjms6niry6g6c8dz0yf96z2kq03jgs06kfdh"; depends=[lava numDeriv survival]; }; timesboot = derive2 { name="timesboot"; version="1.0"; sha256="1ixmcigi1bf42np93md8d3w464papg9hp85v0c3hg3vl4nsm2bji"; depends=[boot]; }; - timeseriesdb = derive2 { name="timeseriesdb"; version="0.2.1"; sha256="0150zs8c8184jzry33aki21prmpnxp3rclp84q6igwxi4grdhlr0"; depends=[DBI reshape2 RJSONIO RPostgreSQL shiny xts zoo]; }; - timetk = derive2 { name="timetk"; version="0.1.1"; sha256="0m8l9ivww5aykdfab6bk9khy7jqkd3yrzbz2r78xnsfzipa9bzmk"; depends=[devtools dplyr forecast lazyeval lubridate padr purrr readr stringi tibble tidyr xts zoo]; }; + timeseriesdb = derive2 { name="timeseriesdb"; version="0.4.1"; sha256="1ghb3lg63fs9zx34l5qczv39mdccnmqzlc74l1zhb8qmsg8sm1g2"; depends=[data_table DBI jsonlite openxlsx RPostgreSQL shiny xtable xts zoo]; }; + timetk = derive2 { name="timetk"; version="0.1.1.1"; sha256="0ca6xnsidc98yjb52gbafvfgxzdgszj8l9hvc77mwgc33g0ydvs1"; depends=[devtools dplyr forecast lazyeval lubridate padr purrr readr stringi tibble tidyr xts zoo]; }; timetools = derive2 { name="timetools"; version="1.14"; sha256="13jchgd9fc8hxj74wm1kg4rwcng4yxblkq04i33djsqghgb5f9mj"; depends=[]; }; timetree = derive2 { name="timetree"; version="1.0"; sha256="1fpdp6mkwm67svqvkfflvqxn52y2041zl09rxrms28ybbd5f84c0"; depends=[phangorn XML]; }; timevis = derive2 { name="timevis"; version="0.4"; sha256="08caa5gilh1c0z41lm3ghf6cpnlsdjfm1v7ha73jxv1655kznmpx"; depends=[htmltools htmlwidgets jsonlite magrittr rmarkdown shiny]; }; @@ -12084,46 +12618,48 @@ in with self; { tinsel = derive2 { name="tinsel"; version="0.0.1"; sha256="0n1x0cf4x6cq1yks0444nxd9snga4m6inc5lfvb7k96fzjb3xgbp"; depends=[]; }; tint = derive2 { name="tint"; version="0.1.0"; sha256="1hczc2nrm8xgvw3igkfnlqyz73686l447kigsrd6m796v8ny1gbf"; depends=[htmltools knitr rmarkdown]; }; tinyProject = derive2 { name="tinyProject"; version="0.5"; sha256="10sllhjcla4pfgp5n1y5vi318q9bcy82j88rx3k1sgzmbq1nc1c2"; depends=[brew devtools]; }; - tinytex = derive2 { name="tinytex"; version="0.5"; sha256="1pg4jfyvandjwz3lmr38pbqi9d045iwkk3xklhsfhhxq6aviq9p7"; depends=[]; }; - tiobeindexr = derive2 { name="tiobeindexr"; version="0.1.0"; sha256="045b0c0mn3qlasclpzc2k3x1xlmcdvg2ixc2n9m6gjmhp2fdm499"; depends=[rvest xml2]; }; + tinytex = derive2 { name="tinytex"; version="0.9"; sha256="08w5hyq3ysh631d5whgcfv1bb007cdc0bjhb83vwmhazs6rgvyjy"; depends=[xfun]; }; + tiobeindexr = derive2 { name="tiobeindexr"; version="0.1.1"; sha256="09vw83hkf7lgd3xyhbmqkyv57g3dz856230xkf8630jiicfvcg3b"; depends=[rvest xml2]; }; tipom = derive2 { name="tipom"; version="1.0.2-1"; sha256="1gdfv0g5dw742j6ycmi0baqh6xcchp3yf2n1g8vn7jmqgz5mlhdr"; depends=[]; }; tippy = derive2 { name="tippy"; version="0.0.1"; sha256="0kkyi4s4ffpyjyfl89cd5y788ab1p253rx179k422y3y1z6w1md7"; depends=[htmltools htmlwidgets jsonlite shiny]; }; tipr = derive2 { name="tipr"; version="0.1.1"; sha256="138xmkfad0xjrmr9v3ladbwsyknyad27wxcav03n6f72plhxmxb6"; depends=[broom purrr tibble]; }; tis = derive2 { name="tis"; version="1.34"; sha256="01bpl8q2n49wpr2gghkcv1zf16b3375xa71mv0q7wwn0da3n7m0n"; depends=[]; }; titan = derive2 { name="titan"; version="1.0-16"; sha256="0x30a877vj99z3fh3cw9762j5ci56964j2466xfbwcywhn9njz5r"; depends=[boot lattice MASS]; }; titanic = derive2 { name="titanic"; version="0.1.0"; sha256="0mdmh0ciwfig00847bmvp50cyvj8pra6q4i4vdg7md19z5rjlx3j"; depends=[]; }; + titeIR = derive2 { name="titeIR"; version="0.1.0"; sha256="047vidn3zydbjijwgz6qm2d9j2ny8ng2sv5jzm8zb300y7k2426c"; depends=[Iso]; }; titrationCurves = derive2 { name="titrationCurves"; version="0.1.0"; sha256="0z127sihd262mdik46sq9vcf05s7jsqmkpm3p4d779viw74bl768"; depends=[]; }; tkRplotR = derive2 { name="tkRplotR"; version="0.1.1"; sha256="0fr30c2xjgpjh0pkqv0m7g413wkzzffbak7ak26k7bsi2ls341qa"; depends=[]; }; tkrgl = derive2 { name="tkrgl"; version="0.8"; sha256="1c5jiahqpf3nfybkzmks785dlkchjdisvknxkb0biv3xj9nzgz14"; depends=[rgl]; }; - tkrplot = derive2 { name="tkrplot"; version="0.0-23"; sha256="1cnyszn3rmr1kwvi5a178dr3074skdijfixf5ln8av5wwcy35947"; depends=[]; }; + tkrplot = derive2 { name="tkrplot"; version="0.0-24"; sha256="04gk48vm8ilj1n3b3ir66pcfv504ra4rlgc0ll4ixbnp6w566wr8"; depends=[]; }; tlemix = derive2 { name="tlemix"; version="0.1.3"; sha256="0c4mvdxlhbmyxj070xyipx4c27hwxlb3c5ps65ipm6gi8v8r6spj"; depends=[]; }; tlm = derive2 { name="tlm"; version="0.1.5"; sha256="1iw08pa70nb25fnv64834s5c8vl456a2rcng7x6v9vs5q37610g6"; depends=[boot]; }; tlmec = derive2 { name="tlmec"; version="0.0-2"; sha256="1gak8vxmfjf05bhaj6lych7bm8hgav1x3h14k2ra7236v82rqbw7"; depends=[mvtnorm]; }; - tm = derive2 { name="tm"; version="0.7-4"; sha256="1vvc0arl1w5g8r8bp5w95w79d7hnyfvkhsw5nq2qxql1sjsq69ya"; depends=[BH NLP Rcpp slam xml2]; }; + tls = derive2 { name="tls"; version="0.1.0"; sha256="183b5m70s2whlgp9s1gb4xnylhlp4hnh3lw6b8f2vx4kahaid763"; depends=[]; }; + tm = derive2 { name="tm"; version="0.7-5"; sha256="05x3kj6dxffcfyn42q2fw9bby5f4wdmslc3ww1dl0r09pz950cax"; depends=[BH NLP Rcpp slam xml2]; }; tm_plugin_alceste = derive2 { name="tm.plugin.alceste"; version="1.1"; sha256="0wid51bbbx01mjfhnaiv50vfyxxmjxw8alb73c1hq9wlsh3x3vjf"; depends=[NLP tm]; }; tm_plugin_dc = derive2 { name="tm.plugin.dc"; version="0.2-8"; sha256="0z843i2wlmx75748p95jz3j45d9bzmlmqa3awgya24k7bdhpd6kd"; depends=[DSL NLP slam tm]; }; tm_plugin_europresse = derive2 { name="tm.plugin.europresse"; version="1.4"; sha256="03qi9rkfwgjvir4cjpi9imc8zaldvan42v9lqfr5d6zhr0ajy6wx"; depends=[NLP tm XML]; }; tm_plugin_factiva = derive2 { name="tm.plugin.factiva"; version="1.7"; sha256="1zcddarjd083p3sly49wvsnbn6bmpx5wd1bqm3acgydxk8y84nif"; depends=[NLP rvest tm xml2]; }; tm_plugin_lexisnexis = derive2 { name="tm.plugin.lexisnexis"; version="1.4.0"; sha256="0q4njhfpwqym9d8xfbb577vn6g9ks4nkpb4bh6j31nzg7yp96av7"; depends=[ISOcodes NLP tm xml2]; }; - tm_plugin_mail = derive2 { name="tm.plugin.mail"; version="0.1"; sha256="0ca2w2p5zv3qr4zi0cj3lfz36g6xkgkbck8pdxq5k65kqi5ndzyp"; depends=[NLP tm]; }; + tm_plugin_mail = derive2 { name="tm.plugin.mail"; version="0.2-1"; sha256="0rn8jqv622qmc0zkz534ka5qnbca2rlabxm3vjbqplr6fh1ahwb1"; depends=[NLP tm]; }; tm_plugin_webmining = derive2 { name="tm.plugin.webmining"; version="1.3"; sha256="1694jidf01ilyk286q43bjchh1gg2fk33a2cwsf5jxv7jky3gl7h"; depends=[boilerpipeR NLP RCurl RJSONIO tm XML]; }; - tmap = derive2 { name="tmap"; version="1.11-2"; sha256="1cinbsfhi8pngidxp3brmba1willknavlrpjzywm85wp7973y045"; depends=[classInt htmltools htmlwidgets leaflet mapview raster RColorBrewer rgdal rgeos sp spdep tmaptools]; }; - tmaptools = derive2 { name="tmaptools"; version="1.2-4"; sha256="1dymngn3hrpky5v767lghijlbagmz57dqrkw57r0gy8a9k06bsx8"; depends=[classInt dichromat geosphere KernSmooth magrittr osmar raster RColorBrewer rgdal rgeos rmapshaper sp spdep XML]; }; + tm1r = derive2 { name="tm1r"; version="1.1.0"; sha256="0vzl1w5x1gpbfkxkqhf6lafvnqzh7z4ahhd38g9a7miw27c60a5a"; depends=[httr jsonlite]; }; + tmap = derive2 { name="tmap"; version="2.1-1"; sha256="0928f7cqwqy66hp959mpaq7idb3riz6ahhfh26aidpaqc85lwqpw"; depends=[classInt htmltools htmlwidgets leaflet mapview raster RColorBrewer sf tmaptools units viridisLite]; }; + tmaptools = derive2 { name="tmaptools"; version="2.0-1"; sha256="0zfj2q3p4xmb7xzpiidfn20g569fscyhryzcpmvwkp98a7fg9swz"; depends=[classInt dichromat KernSmooth lwgeom magrittr raster RColorBrewer rgdal rgeos sf sp units viridisLite XML]; }; tmbstan = derive2 { name="tmbstan"; version="1.0.0"; sha256="01x1nw0mlbpsldrd6hx2g040d9slrhk7hm2pm1v7pci3vxgbpgy9"; depends=[BH Rcpp RcppEigen rstan StanHeaders TMB]; }; tmcn = derive2 { name="tmcn"; version="0.2-12"; sha256="1gqmq3f0plgd44056905l5jd7x9k4ls06hcp006w8skxj1rnwzb9"; depends=[]; }; tmg = derive2 { name="tmg"; version="0.3"; sha256="0yqavibinzsdh85izzsx8b3bb9l36vzkp5a3bdwdbh410s62j68a"; depends=[Rcpp RcppEigen]; }; tmle = derive2 { name="tmle"; version="1.3.0-1"; sha256="1y7fjj2492a70idnqwrlcdpz2bqphdxbaz96yjxnkfhx940y26b5"; depends=[SuperLearner]; }; tmle_npvi = derive2 { name="tmle.npvi"; version="0.10.0"; sha256="00jav1ql3lv18wh9msxnjvz36z2ds44fdi6lrp1pfphh1in4vdcl"; depends=[geometry MASS Matrix R_methodsS3 R_oo R_utils]; }; - tmlenet = derive2 { name="tmlenet"; version="0.1.0"; sha256="1pg9w7yci9j0m1cxi0nwdpp6jwap0b7ql4xkh25kjbq3w5r8w8pr"; depends=[assertthat data_table Matrix R6 Rcpp simcausal speedglm stringr]; }; tmod = derive2 { name="tmod"; version="0.36"; sha256="054kg3rwcmrn1y1x1ba8wflb6m76nmf69g4yj3x1vw0qjjs421nh"; depends=[beeswarm plotwidgets tagcloud XML]; }; tmpm = derive2 { name="tmpm"; version="1.0.3"; sha256="1fqk39zyc07gh0ygi7pfljlnj6ih37jsb7bcxm05zcd4796wil8j"; depends=[reshape2]; }; + tmvmixnorm = derive2 { name="tmvmixnorm"; version="1.0.2"; sha256="04bjdlrz82v9skirap2fmngi2sv9xakkgmkgpwdv3qshszvx3wz4"; depends=[]; }; tmvnsim = derive2 { name="tmvnsim"; version="1.0-2"; sha256="03xsvsg9bqvgl98ywid3h91mmlhax5s6wvmypp3hq91vmc5kvxlp"; depends=[]; }; tmvtnorm = derive2 { name="tmvtnorm"; version="1.4-10"; sha256="1w3kmpx25l7rb80vpclqq4pbbv12qgysyqxjq3lp55l9nklkb7qs"; depends=[gmm Matrix mvtnorm]; }; tnam = derive2 { name="tnam"; version="1.6.5"; sha256="0jbwnsnn6875yprmh6y2i0bvr875hfsg7wfsj6ydmjpr5cpqqk56"; depends=[igraph lme4 network Rcpp sna vegan xergm_common]; }; tnet = derive2 { name="tnet"; version="3.0.14"; sha256="05cc6jrkjbwxzmgzq30h63xzhlgq8f0l3wx2q54vrv0wpvlvfphn"; depends=[igraph survival]; }; toOrdinal = derive2 { name="toOrdinal"; version="1.0-0.0"; sha256="1y46rcm6v2c5n71hdf5rgsgvy913wiazmml60mlxqb70dvz42649"; depends=[crayon testthat]; }; - toaster = derive2 { name="toaster"; version="0.5.5"; sha256="0ga4l3zp422scrgvz701rjznn013vhsbp4gh7v1inqp7kpxafky9"; depends=[foreach GGally ggmap ggplot2 ggthemes memoise network plyr RColorBrewer reshape2 RODBC scales slam wordcloud]; }; - togglr = derive2 { name="togglr"; version="0.1.3"; sha256="033d4mcl2w7nbjmaa5bc28skd63x34k4k4ib94nf11iwdj7bipkw"; depends=[assertthat dplyr getPass glue httr jsonlite keyring lubridate magrittr prettyunits purrr rstudioapi]; }; + togglr = derive2 { name="togglr"; version="0.1.33"; sha256="105c9vxa67bqccj31ksk5myfd0v7v0wbz6qqjhxqndlg7v6ggfzc"; depends=[assertthat dplyr getPass glue httr jsonlite keyring lubridate magrittr parsedate prettyunits purrr rstudioapi]; }; tokenizers = derive2 { name="tokenizers"; version="0.2.1"; sha256="006xf1vdrmp9skhpss9ldhmk4cwqk512cjp1pxm2gxfybpf7qq98"; depends=[Rcpp SnowballC stringi]; }; tolBasis = derive2 { name="tolBasis"; version="1.0"; sha256="0g4jdwklx92dffrz38kpm1sjzmvhdqzv6mj6hslsjii6sawiyibh"; depends=[lubridate polynom]; }; tolerance = derive2 { name="tolerance"; version="1.3.0"; sha256="17qh4ad1f3fbcpwlxxqh8qr9bnwjcl4yxk0l3fkbr6b2l4rc5p86"; depends=[rgl]; }; @@ -12132,9 +12668,11 @@ in with self; { topmodel = derive2 { name="topmodel"; version="0.7.3"; sha256="15w9id90d6l0i0ji3ln3sxnpispb6pgabk4waysqn0nh6y4lfdgb"; depends=[]; }; topologyGSA = derive2 { name="topologyGSA"; version="1.4.6"; sha256="0vas7qab5a86jb277ql63qjvfvx7iqqbcrwky7iyr0s8p8p794ia"; depends=[fields graph gRbase qpgraph]; }; topsis = derive2 { name="topsis"; version="1.0"; sha256="056cgi684qy2chh1rvhgkxwhfv9nnfd7dfzc05m24gy2wyypgxj3"; depends=[]; }; + tosca = derive2 { name="tosca"; version="0.1-2"; sha256="0zr0q0l4ic0hmmahgzm4hzjqzy0vxb31xsgmvqnvi8kya2bb68sh"; depends=[data_table htmltools lda lubridate RColorBrewer stringr tm WikipediR]; }; tosls = derive2 { name="tosls"; version="1.0"; sha256="03nqwahap504yvcksvxdhykplbzmf5wdwgpzm7svn8bymdc472v2"; depends=[Formula]; }; - totalcensus = derive2 { name="totalcensus"; version="0.3.0"; sha256="0i7srsfhskfcq7fdc3sq2rq2p6x508pwgbig86l92zki3ljm7qgs"; depends=[data_table magrittr purrr stringr]; }; - touch = derive2 { name="touch"; version="0.1-3"; sha256="1zzc4h6y0xmr3p7jl0vlvn4yswxz5akgvz8laxgmjgqzk926g9jl"; depends=[stringr]; }; + totalcensus = derive2 { name="totalcensus"; version="0.5.0"; sha256="0qmx1vmkvywkdl837vvyx8wl2ldab80m9gks2dfcqfancl8ijkm8"; depends=[data_table magrittr purrr stringr]; }; + touch = derive2 { name="touch"; version="0.1-4"; sha256="0xz3mvwhyn7wbqhbfp2klrnf89gvsncrv5y7fmk9ym3nkq7z26cg"; depends=[Rcpp]; }; + touchard = derive2 { name="touchard"; version="1.0"; sha256="0hjki9y94kzapkik48dpdz3x5ybi1miy94mvn4klsgs54z68apsi"; depends=[MASS nleqslv numDeriv plotrix]; }; tourr = derive2 { name="tourr"; version="0.5.5"; sha256="12293kp36kz056zd3fnsaf2gy4g8mcs79ws0vgbs7b0hx09sy9vp"; depends=[]; }; tourrGui = derive2 { name="tourrGui"; version="0.4"; sha256="1g9928q3x9rrd9k3k84r201wss3vjd2pngvbaflk5dqh9yf75jpq"; depends=[Cairo colorspace gWidgets RGtk2 tourr]; }; toxboot = derive2 { name="toxboot"; version="0.1.1"; sha256="0sw0mxhcq5k11swlhfpn6xk0nfsambh2yx1721zx75lya27wkmq1"; depends=[data_table tcpl]; }; @@ -12146,23 +12684,25 @@ in with self; { tracer = derive2 { name="tracer"; version="1.0.0"; sha256="1jdh4ljcz7d0w2y5miggqkvv397jdx7fn108hbjw93af2gnh698q"; depends=[clisymbols crayon prettycode]; }; tracheideR = derive2 { name="tracheideR"; version="0.1.1"; sha256="1x1jwzgs2aqb3k17mm9mhfhnbwcmilhkjaz9rl40rcg84xjqdrpl"; depends=[tgram]; }; track = derive2 { name="track"; version="1.1.9"; sha256="1d0hab7xyayyhyyrbv8nvpka1kzry4yx10fg8aqwkca3nm7n2q3c"; depends=[]; }; - trackdem = derive2 { name="trackdem"; version="0.4.1"; sha256="0r33ph7vk5i4nl3bw4642cpy743arly9xmn3n5jk2961q80m0kq5"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo SDMTools shiny]; }; - trackeR = derive2 { name="trackeR"; version="1.0.0"; sha256="0z200jlkgcdxwss0ckbh3vqcfw56fi7pivr9vzf4rkwyf2n6v25s"; depends=[fda ggmap ggplot2 gridExtra gtable jsonlite leaflet raster RSQLite scam XML zoo]; }; - trackr = derive2 { name="trackr"; version="0.7.5"; sha256="1achrnkqnpdjp2vr1s7xsl8fdfdyifgv5vr00b3xq9pkr4jggj6z"; depends=[CodeDepends fastdigest ggplot2 gridGraphics histry htmltools knitr lattice miniUI RJSONIO rmarkdown rsolr shiny]; }; + trackdem = derive2 { name="trackdem"; version="0.4.2"; sha256="0isd3cs10z6sqm8sh2q577z8bhnagq9gqsvdlsv377lk1z7wd1ln"; depends=[MASS neuralnet png raster Rcpp RcppArmadillo SDMTools shiny]; }; + trackeR = derive2 { name="trackeR"; version="1.2.0"; sha256="07kfnla6dq1x62k43nl2d2s2bn1m1djzqzhks09f8fjz7vcbjgsy"; depends=[fda foreach ggmap ggplot2 ggridges gridExtra gtable jsonlite leaflet raster RSQLite scam sp xml2 zoo]; }; + trackr = derive2 { name="trackr"; version="0.10.2"; sha256="0nl4f476a6rq5hhbsh8snhgaspalrx7r74n6i7z51p39z8rdfsik"; depends=[CodeDepends fastdigest ggplot2 gridGraphics histry htmltools lattice miniUI RJSONIO rlang rmarkdown roprov rsolr shiny]; }; tractor_base = derive2 { name="tractor.base"; version="3.2.2"; sha256="1pbh9hand7h68vxap2qis3a7zs5qkrj2wxk8flqyvhx50p98wigv"; depends=[ore reportr shades]; }; trade = derive2 { name="trade"; version="0.5.3"; sha256="0v0yw261daag0hw3sc7dh2bpm8sd3r46xbcbcbxv7qb59rad756w"; depends=[antitrust]; }; + trafo = derive2 { name="trafo"; version="1.0.0"; sha256="03s341v264yvcyfli4smrsgak15123bilm8a944kg64s0z3hg79y"; depends=[FNN lmtest moments pryr]; }; traitr = derive2 { name="traitr"; version="0.14"; sha256="1pkc8wcq55229wkwb54hg9ndbhlxziv51n8880z6yq73zac1hbmf"; depends=[digest gWidgets proto]; }; traits = derive2 { name="traits"; version="0.3.0"; sha256="155y8j69214xxi1bfk07k30zlpm3q6fmz7ydhnkvw0kv4l0i5pc5"; depends=[crul data_table hoardr httr jsonlite readr rvest taxize tibble xml2]; }; traj = derive2 { name="traj"; version="1.2"; sha256="0mq6xdbxjqjivxyy7cwaghwmnmb5pccrah44nmalssc6qfrgys4n"; depends=[cluster GPArotation NbClust pastecs psych]; }; - trajectories = derive2 { name="trajectories"; version="0.1-4"; sha256="0vwfbx5s8ywasxwv8cld4s6r96vlyknxipp49rsfpqn94nawhwnx"; depends=[lattice sp spacetime]; }; + trajectories = derive2 { name="trajectories"; version="0.2-0"; sha256="0zd2a57pfc6aamh6d3n79sxlsvdwzrnq77xsfjyil4kvgh9ajd9c"; depends=[lattice sp spacetime]; }; trajr = derive2 { name="trajr"; version="1.1.0"; sha256="1wfncd3ays8wqz8hhwz46diyac49ivz31qm1rvy1gkbw71icmnd7"; depends=[plotrix signal]; }; - tram = derive2 { name="tram"; version="0.2-2"; sha256="1lyk2srbj5axh2h8y54sxn5l36sa9q9nkkb7vvbhms5dinld1z6j"; depends=[basefun Formula mlt multcomp sandwich survival variables]; }; + tram = derive2 { name="tram"; version="0.2-3"; sha256="1bbz9a57pmdalb9xmhawy9wjswcvr7lcb390plrs43lka2j55j6n"; depends=[basefun Formula mlt multcomp sandwich survival variables]; }; transcribeR = derive2 { name="transcribeR"; version="0.0.0"; sha256="0y2kxg2da71i962fhsjxsr2ic3b31fmffhj3gg97b0nykfpcviib"; depends=[httr]; }; translate = derive2 { name="translate"; version="0.1.2"; sha256="1w0xrg1xxwfdanlammmixf06hwq700ssbjlc3cfigl50p87dbc5x"; depends=[functional lisp RCurl RJSONIO]; }; translateR = derive2 { name="translateR"; version="1.0"; sha256="11kh9hjpsj5rfmzybnh345n1gzb0pdksrjp04nzlv948yc0mg5gm"; depends=[httr RCurl RJSONIO textcat]; }; translation_ko = derive2 { name="translation.ko"; version="0.0.1.5.2"; sha256="1w5xibg4znhd39f3i0vsqckp6iia43nblqxnzgj0ny6s7zmdq1wd"; depends=[]; }; transport = derive2 { name="transport"; version="0.9-4"; sha256="0ham0cla4qwfd6fqyckpdl2n2gm3qnl7ry1xi9kjvbajlcc0xwi2"; depends=[Rcpp]; }; trapezoid = derive2 { name="trapezoid"; version="2.0-0"; sha256="0f6rwmnn61bj97xxdgbydi94jizv1dbq0qycl60jb4dsxvif8l3n"; depends=[]; }; + trawl = derive2 { name="trawl"; version="0.2.1"; sha256="1ns4nk8zdnl2z9clc2q38sbb1ijkj86lcifxq7d111mcwsmpb6fi"; depends=[DEoptim MASS rootSolve Runuran squash TSA]; }; treatSens = derive2 { name="treatSens"; version="2.1.3"; sha256="159dpd4wg0i4cidg40lad665sm3j4qch8d1y3k9chwggbhcad5jn"; depends=[BH dbarts lme4 mvtnorm nlme Rcpp RcppEigen]; }; tree = derive2 { name="tree"; version="1.0-39"; sha256="0q2dnl1hvyaw76lkfq0i9d92z68r29ssb3a9j8jknnzx896x055x"; depends=[]; }; tree_bins = derive2 { name="tree.bins"; version="0.1.1"; sha256="1flrkhdqimsn8dxn97xzl1fykx916i1dis1bfany44yk0cjmd85g"; depends=[data_table dplyr rpart rpart_utils]; }; @@ -12173,27 +12713,29 @@ in with self; { treecm = derive2 { name="treecm"; version="1.2.2"; sha256="0vrawg4vvy270dn20gb2k99xi4q89l4mjz0mm7ikpz8wxqypzq2l"; depends=[plyr]; }; treedater = derive2 { name="treedater"; version="0.2.0"; sha256="18y1nbpinpcnczyn0kwlcnhbmnxv7814ms6l5qfikdqrxd2gx3si"; depends=[ape limSolve]; }; treelet = derive2 { name="treelet"; version="1.1"; sha256="0k3qhxjg7ws6jfhcvvv9jmy26v2wzi4ghnxnwpjm8nh7b90lbysd"; depends=[]; }; - treeman = derive2 { name="treeman"; version="1.1.2"; sha256="0imwg4wi85gjhbhpym5gs0my8kacx28l74m5xbfwqdi4gxpz3kkc"; depends=[ape bigmemory plyr RJSONIO stringr]; }; + treeman = derive2 { name="treeman"; version="1.1.3"; sha256="0xvazizpi3dbdgjd48ff4kg4dhsi2yzbnkk43pgyi21zii673yyn"; depends=[ape bigmemory plyr RJSONIO stringr]; }; treemap = derive2 { name="treemap"; version="2.4-2"; sha256="15bdgkdwryb55v82b3hpcx4ykfg5z7zf10h0wwknf6kl1kn34v90"; depends=[colorspace data_table ggplot2 gridBase igraph RColorBrewer shiny]; }; - treemapify = derive2 { name="treemapify"; version="2.5.0"; sha256="0s8qrm2ifbpm31zwyc2f2f6jyc04r06vy6vgq3k99aq67mz6krdq"; depends=[ggfittext ggplot2]; }; + treemapify = derive2 { name="treemapify"; version="2.5.2"; sha256="0iraqkvlk97xk8iv23nvcb144h195l3kbis3lm4r58prlgffyac3"; depends=[ggfittext ggplot2]; }; treeperm = derive2 { name="treeperm"; version="1.6"; sha256="0mz7p9khrsq4dbkijymfvlwr01y4fvs0x6si4x5xid16s2zsnmm4"; depends=[]; }; treeplyr = derive2 { name="treeplyr"; version="0.1.4"; sha256="140j1cd8a34fww8bi6b7mi3c7c1nik5sajk085nyfmjq7lxds0cy"; depends=[ape dplyr geiger lazyeval phytools Rcpp]; }; treespace = derive2 { name="treespace"; version="1.1.3"; sha256="0s3hmmjx2hf8l0piwz6mddd80hb5jsljnpzpakighqj9iiah5jjv"; depends=[ade4 adegenet adegraphics adephylo ape combinat distory fields htmlwidgets MASS phangorn phytools Rcpp rgl RLumShiny scatterD3 shiny shinyBS]; }; treethresh = derive2 { name="treethresh"; version="0.1-11"; sha256="1fksyn9mycr6dpw1yh5b3fa7fk7ndz7q39174daplm55jbrz1dr5"; depends=[EbayesThresh wavethresh]; }; trekfont = derive2 { name="trekfont"; version="0.9.2"; sha256="1njmllp6i10rafjq5c9z1qp3bmy8zr3nxv9cjw75w5fnrh50rlzh"; depends=[]; }; - trelliscope = derive2 { name="trelliscope"; version="0.9.8"; sha256="1581ss5c3f7mnv6s3p9f8kfwnks0l80kxwpxv9mq61w3lf9fksm2"; depends=[base64enc curl data_table datadr digest DistributionUtils ggplot2 hexbin htmltools htmlwidgets jpeg jsonlite lattice png rsconnect shiny]; }; + trelliscopejs = derive2 { name="trelliscopejs"; version="0.1.14"; sha256="1yjgn0a7jdfp1l3b1l8ss4pl23z9j4w27ny73mgmdbji02xqklyv"; depends=[autocogs base64enc digest DistributionUtils dplyr ggplot2 gtable htmltools htmlwidgets jsonlite knitr progress purrr rlang tidyr webshot]; }; trelloR = derive2 { name="trelloR"; version="0.1.0"; sha256="0d549yw9pfxs8a3q716z08fzg68bkm5l09cv5iqqkm4gyasrxsf4"; depends=[dplyr httr jsonlite]; }; - trend = derive2 { name="trend"; version="1.1.0"; sha256="06yifqbsvxbmk5gld4z2nnyhf59v8ks5xjwacmb25mv9r6bn388b"; depends=[extraDistr]; }; - trialr = derive2 { name="trialr"; version="0.0.1"; sha256="0v274a4w9pamlp9y7xs8hw783ib7z3p19gx94dciyvgm2wj9h7di"; depends=[BH gtools Rcpp RcppEigen rstan rstantools StanHeaders]; }; + trend = derive2 { name="trend"; version="1.1.1"; sha256="1bd567n15k2vpmgbx02584k5kglrc58mlb5kgd07wdss3knpa48q"; depends=[extraDistr]; }; + trialr = derive2 { name="trialr"; version="0.0.4"; sha256="1vav3kvmwl7lf2hp89i0vh6a8zc294m0ch24mw0a0ml6mvw9iwpx"; depends=[BH dplyr ggplot2 gtools loo magrittr Rcpp RcppEigen rstan rstantools StanHeaders stringr tidyr]; }; triangle = derive2 { name="triangle"; version="0.11"; sha256="0983bvywbyl0sms29j1hby2qy6p984vy4r0q1awh1f8gr01bbk5b"; depends=[]; }; triangulation = derive2 { name="triangulation"; version="0.5.0"; sha256="1zp09g0s0qpqgz2k6jx32pswh2zqyyd0b62lf1dx1p46m28dafkn"; depends=[]; }; - tribe = derive2 { name="tribe"; version="0.1.6"; sha256="0sx6hyfyg8x0vxq4l4gvv5kb8afrbjp3qk3s48l85vf5v1chwnhf"; depends=[bazar dplyr lazyeval magrittr rlist rstudioapi]; }; - tricolore = derive2 { name="tricolore"; version="1.0.3"; sha256="0lycsb29havx911q0fv4r184nr81w1c7yvy4sn6jqg35g2p1qqdv"; depends=[assertthat dplyr ggplot2 ggtern shiny]; }; + tribe = derive2 { name="tribe"; version="0.1.7"; sha256="1k12yzicf3p5wpgzpsv4kk5xzrdfx712z67kj9xmcr1mbs8l5skb"; depends=[bazar dplyr lazyeval magrittr rlist rstudioapi]; }; + tricolore = derive2 { name="tricolore"; version="1.2.0"; sha256="0mv72lh5z8drdn96nb39dz9gnzia6vm6vbl8z6ldmd952x727y0a"; depends=[assertthat dplyr ggplot2 ggtern shiny]; }; triebeard = derive2 { name="triebeard"; version="0.3.0"; sha256="1hqyz57gph02c9fdc07lxz113bbklif3g18sw8jan6pakhhdc7dz"; depends=[Rcpp]; }; trifield = derive2 { name="trifield"; version="1.1"; sha256="0xk48fkd5xa3mfn3pwdya0ihpkwnh20sgj3rc7fmzjil47kqscvy"; depends=[]; }; + trigpoints = derive2 { name="trigpoints"; version="1.0.0"; sha256="1hckjh2gb0fvd2c8x6mj0idpk3im7b831y7mbli1hqhry6qqdw15"; depends=[sf tibble]; }; trimTrees = derive2 { name="trimTrees"; version="1.2"; sha256="0v75xf5186dy76332x4w7vdwcz7zpqga8mxrb5all2miq2v45fi8"; depends=[mlbench randomForest]; }; - trimcluster = derive2 { name="trimcluster"; version="0.1-2"; sha256="0lsgbg93hm0w1rdb813ry0ks2l0jfpyqzqkf3h3bj6fch0avcbv2"; depends=[]; }; + trimcluster = derive2 { name="trimcluster"; version="0.1-2.1"; sha256="0013bpyq6mkvjn38qsmwnsxfiwxgwngnqxycxvgpgmiadhm8fjmn"; depends=[]; }; trimr = derive2 { name="trimr"; version="1.0.1"; sha256="0gcn18nwxmax9c35is0nldyh74cw8rg3gj60cixzs9qjnpb9xx3d"; depends=[]; }; + trinROC = derive2 { name="trinROC"; version="0.2"; sha256="1hdqf845sb44wrzjb0lk1n24zcf9psv7ck6cwvpjvlwscrqbfd0p"; depends=[ggplot2 gridExtra rgl]; }; trioGxE = derive2 { name="trioGxE"; version="0.1-1"; sha256="1ra86l3i7fhb6nsy8izixyvm6z23shv7fcjmnnpil54995j15ax4"; depends=[gtools mgcv msm]; }; trip = derive2 { name="trip"; version="1.5.0"; sha256="1qdq3hbqqaa0cmb47ssg3pr3jksni7g4xsc7bsj6wwdw62d9wzf6"; depends=[maptools MASS raster sp spatstat]; }; tripEstimation = derive2 { name="tripEstimation"; version="0.0-44"; sha256="1ylpyzlqr6l5haxq4icnlxw6vgvc2lsfz5sm2wqqm4m6h3p0i6s6"; depends=[lattice mgcv rgdal sp zoo]; }; @@ -12201,24 +12743,24 @@ in with self; { triversity = derive2 { name="triversity"; version="1.0"; sha256="1bar2bpy8jvj91jmzzdwy6rlvirsbxrzqnx4r825irqhc69gc53r"; depends=[data_tree Matrix]; }; tropAlgebra = derive2 { name="tropAlgebra"; version="0.1.1"; sha256="1idvhxhw2f6z8iq0nfdj6jmzy8913vid84rvln6rx2dkzw3s9wnl"; depends=[]; }; tropicalSparse = derive2 { name="tropicalSparse"; version="0.1.0"; sha256="1ay6i3pzz5lpvznxqln31mijp86p6z0df7rvp0gm4lxvn294m7f8"; depends=[]; }; - tropr = derive2 { name="tropr"; version="0.1.2"; sha256="1nm97sqmj4nfy7h8z58gmd9ipyrkw6skh2wx2g3ivm9pn3m50bwl"; depends=[digest httr magrittr rvest stringr xml2]; }; trotter = derive2 { name="trotter"; version="0.6"; sha256="0i8r2f2klkkfnjm7jhvga3gx6m7r97pd73d88004jzlm9ficspgy"; depends=[]; }; - trtf = derive2 { name="trtf"; version="0.3-2"; sha256="16nsrg68vn9p4s5al7fg6fg02cr3ccswzmhig7k4irprsnhdy4fr"; depends=[Formula libcoin mlt partykit sandwich variables]; }; + trread = derive2 { name="trread"; version="0.2.5"; sha256="0rygk71qrp9k3hw3fq80q5kf9fwwfpwlgl268ij2x84n399g16p2"; depends=[assertthat dplyr here htmltools httr magrittr readr scales stringr tibble]; }; + trtf = derive2 { name="trtf"; version="0.3-3"; sha256="1jvbh4c1s8nd4yf04i2rmrzx6rw92imdyp41wl40097133x9a0fb"; depends=[Formula libcoin mlt partykit sandwich variables]; }; trueskill = derive2 { name="trueskill"; version="0.1"; sha256="0mqvm64fcsxjlh789lqdk6l28q31yhh6jjirwjlgbpxxb90c5107"; depends=[]; }; truncSP = derive2 { name="truncSP"; version="1.2.2"; sha256="1hdi518j3sg9273g01l1jqlmqya3ppim82ma7zakwqpmsjmzw18q"; depends=[boot truncreg]; }; truncdist = derive2 { name="truncdist"; version="1.0-2"; sha256="02ihw4ixhadwr3sqm6r264i8vpcaz8pn69vkzabd8fwqvn5vcj5q"; depends=[evd]; }; truncgof = derive2 { name="truncgof"; version="0.6-0"; sha256="0b499i9zjwvva5jfl9fj02jjrgy8myxqfjwa0cjg0jrpgxczgwg8"; depends=[MASS]; }; truncnorm = derive2 { name="truncnorm"; version="1.0-8"; sha256="0zn88wdd58223kibk085rhsikl4yhlrwiyq109hzjg06hy6lwmj9"; depends=[]; }; - truncreg = derive2 { name="truncreg"; version="0.2-4"; sha256="1rmf1v2khsx82yzyyk51k7fbnbchf21lj9yqrays1z2mx3p1l1fc"; depends=[maxLik]; }; + truncreg = derive2 { name="truncreg"; version="0.2-5"; sha256="1scbjh5k1b8cjjavax08grlxdfs75s63dss0ifpz4d0axc4nm3iy"; depends=[maxLik]; }; trust = derive2 { name="trust"; version="0.1-7"; sha256="013gmiqb6frzsl6fsb5pqfdapwdxas0llg954hlcvgki9al5mlg3"; depends=[]; }; trustOptim = derive2 { name="trustOptim"; version="0.8.6.2"; sha256="1nsl8jd6cna52b5dd92jw3sh84jqpg7gazskn7166bcjbph19bf7"; depends=[Matrix Rcpp RcppEigen]; }; tryCatchLog = derive2 { name="tryCatchLog"; version="1.0.2"; sha256="0452xcfv98d2nfdhi9l2033s381lsa1kjghmrk05d3kc88d22np7"; depends=[futile_logger]; }; - tsBSS = derive2 { name="tsBSS"; version="0.5.1"; sha256="0hysb132cjymlqg5bcsqdvii7kyx3rh07c4bsds636j1cypi86kd"; depends=[boot forecast ICtest JADE Rcpp RcppArmadillo]; }; + tsBSS = derive2 { name="tsBSS"; version="0.5.2"; sha256="00brzy0dkvdwrsf5jlpyp6ggwc2wkmdkb3l6h8fx1i3lmhnaqhkg"; depends=[boot forecast ICtest JADE Rcpp RcppArmadillo]; }; tsDyn = derive2 { name="tsDyn"; version="0.9-48"; sha256="01yqfd156ffnxy9wyd3s9vkpkc9n0davs1cq606sbpvvkmphnws3"; depends=[foreach forecast MASS Matrix mgcv mnormt nnet tseries tseriesChaos urca vars]; }; tsModel = derive2 { name="tsModel"; version="0.6"; sha256="0mkmhzj4g38ngzfcfx0zsiqpxs2qpw82kgmm1b8gl671s4rz00zs"; depends=[]; }; tsPI = derive2 { name="tsPI"; version="1.0.2"; sha256="0lw4s7gxn4xldsk5f3dz27bb9jywa14195703b5q1497h9j966gk"; depends=[KFAS]; }; tsSelect = derive2 { name="tsSelect"; version="0.1.8"; sha256="0ysijzhhwaj5n7h50jacshnla6d0h61q0f6lj19ic0lwvlz4yazy"; depends=[forecast]; }; - tsallisqexp = derive2 { name="tsallisqexp"; version="0.9-2"; sha256="19535zlr6gjg45f8z6hm98pamgn20z19m8qb63997vbj4azsrjfv"; depends=[]; }; + tsallisqexp = derive2 { name="tsallisqexp"; version="0.9-3"; sha256="0mzqplsj2w4a7jnav43afyk8ymy6p444j7km6kc8c2g4aifpgxcb"; depends=[]; }; tsbox = derive2 { name="tsbox"; version="0.0.3"; sha256="1dcfp0lg6fvhhkspgk9a41crnfq7gx50ll4a4a0qil795349srnj"; depends=[anytime data_table]; }; tsbridge = derive2 { name="tsbridge"; version="1.1"; sha256="0mry3ia54cdfydpzm8asrq1ldj70gnpb5dqzj51w0jiyps2zlw6f"; depends=[mvtnorm tsbugs]; }; tsbugs = derive2 { name="tsbugs"; version="1.2"; sha256="130v4x6cfy7ddvhijsnvipm4ycrispkj1j0z5f326yb4v5lrk91x"; depends=[]; }; @@ -12235,17 +12777,18 @@ in with self; { tsfknn = derive2 { name="tsfknn"; version="0.1.0"; sha256="0gzij2fbgwavpsqmr7cp012lhii23fav4nsrbc2w9qingglcnqd1"; depends=[ggplot2]; }; tsgui = derive2 { name="tsgui"; version="0.0.3"; sha256="16cx68gq2f63wx7mhbv0aq6pr71wfbc035kjbjjsfrbagaq4ib13"; depends=[RandomFieldsUtils tcltk2 tkrplot]; }; tsiR = derive2 { name="tsiR"; version="0.3.0"; sha256="1brlwsbs4rac8z6cf1q3xm1apdi4ban5hj7p3qvz2yx810gbxp1d"; depends=[ggplot2 kernlab reshape2]; }; - tsibble = derive2 { name="tsibble"; version="0.3.0"; sha256="0rakw6fwkxlvdwzw5cj31a6dkq88jr2ffrkdwc41vasdxzf6xwrc"; depends=[dplyr lubridate pillar purrr Rcpp rlang tibble tidyr tidyselect]; }; + tsibble = derive2 { name="tsibble"; version="0.5.3"; sha256="0i026q33zsv184rbywbmcd8m7cilg89m7ai0n1m74z6c57zs8lc0"; depends=[anytime dplyr lubridate purrr Rcpp rlang tibble tidyr tidyselect]; }; tsintermittent = derive2 { name="tsintermittent"; version="1.9"; sha256="1mrb6yrsjwj6j40n97sgg42ddvwhjnaiq9k7ka249bbq01gf2975"; depends=[MAPA]; }; + tsmp = derive2 { name="tsmp"; version="0.3.2"; sha256="1q1rdlx90dwk2p9s7i3246yi192pwysflphfvd20ldc0qm815sml"; depends=[audio doSNOW foreach magrittr progress]; }; tsna = derive2 { name="tsna"; version="0.2.0"; sha256="09q01jzj1rnv2f2jf7djnq5xrkp7lvykdbf4bfswsy0f95j0asx2"; depends=[network networkDynamic statnet_common]; }; tsne = derive2 { name="tsne"; version="0.1-3"; sha256="0s8cv2pndkddq62rzlgzgfdjp1vjv5hz5i5957sllnb97vbzbzb6"; depends=[]; }; tsoutliers = derive2 { name="tsoutliers"; version="0.6-6"; sha256="0q4lkqasnsps8lzpiyk074nfhv29sbma080729c8l3ba1sa9pmyn"; depends=[forecast KFKSDS stsm]; }; tspmeta = derive2 { name="tspmeta"; version="1.2"; sha256="028jbbd0pwpbjq4r6jcc1h0p7c4djcb9d2mvgzw1rmpphaxjvrkd"; depends=[BBmisc checkmate fpc ggplot2 MASS splancs stringr TSP vegan]; }; tsqn = derive2 { name="tsqn"; version="1.0.0"; sha256="1iv1wwa6a9824dbgfk5a609szppc3a8j250z74hb8csjvwwx9qq9"; depends=[fracdiff MASS robustbase]; }; - tstools = derive2 { name="tstools"; version="0.3.6.1"; sha256="066bkm4hqkbhslk3f3vk9w4hzv3smg718vpav04byrvlcdiibv0c"; depends=[data_table jsonlite xts zoo]; }; + tstools = derive2 { name="tstools"; version="0.3.8"; sha256="0daxrp91hxc367hlzla0s7x5dddnx462239jcq0ickx6awkk753g"; depends=[data_table jsonlite xts zoo]; }; tswge = derive2 { name="tswge"; version="1.0.0"; sha256="0wj0kyb1dcwfn8wjp7skgcflc48cr4va0i0jg8x970658if7z6fz"; depends=[astsa MASS PolynomF signal waveslim]; }; tsxtreme = derive2 { name="tsxtreme"; version="0.3.1"; sha256="0cfska93ws5x11pslcdhf5rrshxzh6ddlgmfkl9zlci2rqdbwz35"; depends=[evd MASS mvtnorm]; }; - ttScreening = derive2 { name="ttScreening"; version="1.5"; sha256="0qn8lkvgvqpmm368fwpqkm09yaj9mw42mjlikyiwpv2wrgbpmg9n"; depends=[corpcor limma MASS matrixStats sva]; }; + ttScreening = derive2 { name="ttScreening"; version="1.6"; sha256="1i8c9l3sdkzl99zxxyfqm84vkh6wjdh3a32l5q8ikf74g9dhxkf4"; depends=[corpcor limma MASS matrixStats simsalapar sva]; }; ttbbeer = derive2 { name="ttbbeer"; version="1.1.0"; sha256="1azffcizm3460kxvrxxkilc6qxspyi247x8drrw5ywfichwhmdhc"; depends=[]; }; tth = derive2 { name="tth"; version="4.3-2-1"; sha256="19rvmyprl1nk9mmngk6dax8rnli10msfvm3vzp86pbdjxnsh3hjc"; depends=[]; }; tttplot = derive2 { name="tttplot"; version="1.1.1"; sha256="0rmgp1888y07w0h8kwq1azpr6bysjq4pyjf6ygpra75jj4563wx9"; depends=[]; }; @@ -12254,71 +12797,76 @@ in with self; { tuber = derive2 { name="tuber"; version="0.9.7"; sha256="0ypfzxk0cyb81y61xxj4bhr5v9afnd7z9wi09xippjv8djbm78yb"; depends=[dplyr httr jsonlite plyr purrr]; }; tubern = derive2 { name="tubern"; version="0.1.0"; sha256="0wpn4aig6r1kpncrgrqra4kr0f07rdq7z4p2k0h28f7kww6l52vv"; depends=[httr jsonlite]; }; tuckerR_mmgg = derive2 { name="tuckerR.mmgg"; version="1.5.1"; sha256="0lrylh0np0kbl4xx3gmlvid0g11fh0ad39wdwbz6hrmf5pzsjdjq"; depends=[]; }; - tufte = derive2 { name="tufte"; version="0.3"; sha256="1fpv9ilf8ajynz38ny0abfnq20xzpgwbxaxj8ijwy8viki893bd0"; depends=[htmltools knitr rmarkdown xfun]; }; + tufte = derive2 { name="tufte"; version="0.4"; sha256="0vp7rsb8qa21mkcfxy57sgb26nm4s492r0069rmn8fcpazcsbzqb"; depends=[htmltools knitr rmarkdown xfun]; }; tufterhandout = derive2 { name="tufterhandout"; version="1.2.1"; sha256="04fvvbx69a28nk7i4wz5ynamz1yvsa2ibz542r1xaq1ikk0ywqbw"; depends=[knitr rmarkdown]; }; tukeytrend = derive2 { name="tukeytrend"; version="0.6"; sha256="0lsxfpkim4fkrm2lrjhn3w55c0p694vbkal3mjqk6vnmnycg9d71"; depends=[lme4 Matrix mgcv multcomp nlme pbkrtest]; }; tumblR = derive2 { name="tumblR"; version="1.1"; sha256="0gl6q6rff9bp21gvi3bz8kmwbhimxqrv1mmzwshl1ys9r7d4dvps"; depends=[httr RCurl RJSONIO stringr]; }; tumgr = derive2 { name="tumgr"; version="0.0.4"; sha256="1ylfmrsg177g75l2scjpgw6v4dpz62r7cy89pql9zd5zqy167xqj"; depends=[minpack_lm]; }; - tuneR = derive2 { name="tuneR"; version="1.3.2"; sha256="1xk66rrahfvvbjzpx2mkbmlmyj0l3vidd8kz24f72wh56gbdgbsa"; depends=[signal]; }; - tuneRanger = derive2 { name="tuneRanger"; version="0.2"; sha256="0dk8nnh3sp0mlfr4vfc33r83a5kdgdi3sbqs0v4311i6dv72c1hn"; depends=[BBmisc DiceKriging lhs lubridate mlr mlrMBO ParamHelpers ranger smoof]; }; + tuneR = derive2 { name="tuneR"; version="1.3.3"; sha256="0av978m4h2iqazyfq6n2cgkh4wpllihh7s29lah2nb8ngc0w5hxx"; depends=[signal]; }; + tuneRanger = derive2 { name="tuneRanger"; version="0.3"; sha256="1hj77fy522lr68h3ypsms96pkrahhn0sp50cggmnf60qdqcgdbjq"; depends=[BBmisc DiceKriging lhs lubridate mlr mlrMBO ParamHelpers ranger smoof]; }; tuple = derive2 { name="tuple"; version="0.4-02"; sha256="0fm8fsdfiwknjpc20ivi5m5b19r9scdxhzij70l8qi3ixw1f0rnk"; depends=[]; }; turboEM = derive2 { name="turboEM"; version="2018.1"; sha256="1xjpm2dxn48nflqriplxxbrjxv0spix6v7cp76gyh4kj8ylnbna6"; depends=[doParallel foreach iterators numDeriv quantreg]; }; turfR = derive2 { name="turfR"; version="0.8-7"; sha256="007jmkppfv1x4zzvvd65fhg5k15ybjhsya2zfjgwm77wm34y81ca"; depends=[dplyr]; }; turner = derive2 { name="turner"; version="0.1.7"; sha256="1xckb750hbfmzhvabj0lzrsscib7g187b44ag831z58zvawwh772"; depends=[tester]; }; tutorial = derive2 { name="tutorial"; version="0.4.3"; sha256="0sxdlpw0w4azlaxdlk36ycrric6pbj2zi4nyv26pgsp0cr1hrx6r"; depends=[base64enc knitr markdown rjson]; }; tuts = derive2 { name="tuts"; version="0.1.1"; sha256="0mwc6lsnhxww041wh3020wz7w812asp1d6djv4n9pl7jil0kvkry"; depends=[coda doParallel foreach lomb mcmcplots rjags truncnorm]; }; - tvR = derive2 { name="tvR"; version="0.2.0"; sha256="06h90r0mlflsbbvg09s1ap8b16yfk285ma8rzzdi7cmkfdc5hlyx"; depends=[filling Matrix Rcpp RcppArmadillo Rdpack]; }; + tvR = derive2 { name="tvR"; version="0.3.0"; sha256="1pg13bvndqyyi2yl1bg3bkdh2xq060ihl25j3a91nahwasy3225m"; depends=[Matrix Rcpp RcppArmadillo Rdpack]; }; tvReg = derive2 { name="tvReg"; version="0.3.0"; sha256="16z032j5wxyvgc29m8sgh4wcvsdam6a0srjwym52885rdslbkmjy"; depends=[bvarsv MASS Matrix systemfit vars]; }; tvd = derive2 { name="tvd"; version="0.1.0"; sha256="07al7gpm81a16q5nppsyc5rhv6zzkcvw72isx955b1q189v073aw"; depends=[Rcpp]; }; tvm = derive2 { name="tvm"; version="0.3.0"; sha256="1iv0qrks1zdiq8jaqr1h46snq8wc3g3q017hxc8zc6fqnsz1whf6"; depends=[ggplot2 reshape2]; }; twang = derive2 { name="twang"; version="1.5"; sha256="1sp1vb6l0mwpy9b9my5d3spc0q0zs7xg4dkmi4cl7hy7m9xy1dbk"; depends=[gbm lattice latticeExtra survey xtable]; }; tweedie = derive2 { name="tweedie"; version="2.3.2"; sha256="10fv998qjxsyx0h94fi0xbh6xbf24nwgh254n9zfnmix9vk2cqls"; depends=[]; }; - tweenr = derive2 { name="tweenr"; version="0.1.5"; sha256="06h0vhxlljmvxg4a62sqrq53lpbvl5w19dqcpyw1jqvrb5agidnq"; depends=[Rcpp]; }; - tweet2r = derive2 { name="tweet2r"; version="1.0"; sha256="0v7xshk389k3aws72ww9kqc2ycw6l6q9xmhps47g3bdl64jy8bay"; depends=[ggmap ggplot2 maptools plyr rgdal ROAuth RPostgreSQL RSQLite sp spacetime spatstat splancs streamR]; }; + tweenr = derive2 { name="tweenr"; version="1.0.0"; sha256="0r98ln17fdzdda66rsj6lqwi843anl6m7c287kbzc4gkj931cifh"; depends=[farver magrittr Rcpp rlang]; }; + tweet2r = derive2 { name="tweet2r"; version="1.1"; sha256="1ivzc05af3fbdxn99lcphm74qs64lz8577zzi6r52r9xjpsqpqzi"; depends=[ggmap ggplot2 maptools plyr rgdal ROAuth RPostgreSQL RSQLite sp spacetime spatstat splancs streamR]; }; twfy = derive2 { name="twfy"; version="0.1.0"; sha256="14xxl9y8iagnn5jd06k6jyy4wk7crm64svz8h0zmzcvg47k8bwc7"; depends=[httr jsonlite]; }; twiddler = derive2 { name="twiddler"; version="0.5-0"; sha256="0r16nfk2afcw7w0j0n3g0sjs07dnafrp88abwcqg3jyvldp3kxnx"; depends=[]; }; twilio = derive2 { name="twilio"; version="0.1.0"; sha256="0b70vcc2bd5jpd2d82i2k828q90viah0b9abz2r627bbyxivpcnd"; depends=[httr jsonlite lubridate magrittr purrr]; }; twitteR = derive2 { name="twitteR"; version="1.1.9"; sha256="1hh055aqb8iddk9bdqw82r3df9rwjqsg5a0d2i0rs1bry8z4kzbr"; depends=[bit64 DBI httr rjson]; }; + twl = derive2 { name="twl"; version="1.0"; sha256="0n2r40ddsr5zpzi92k7f0lvq78k5cmfbqzjxvr78hwq6j13dhar3"; depends=[corrplot data_table MCMCpack Rfast]; }; twoStageGwasPower = derive2 { name="twoStageGwasPower"; version="0.99.0"; sha256="1xvy6v444v47i29aw54y29xiizkmryv8p3mjha93xr3xq9bx2mq7"; depends=[]; }; twostageTE = derive2 { name="twostageTE"; version="1.3"; sha256="0mkxs3lmzja51zdrf5himhwcdygpj6czhdd2bydakm26kvw7znwr"; depends=[isotone]; }; + twoway = derive2 { name="twoway"; version="0.6.2"; sha256="0q053jvb2sa762bjnpzkxzdcq1wk82ynp4rjl4j6qncqccvqq0c3"; depends=[]; }; txtplot = derive2 { name="txtplot"; version="1.0-3"; sha256="1949ab1bzvysdb79g8x1gaknj0ih3d6g63pv9512h5m5l3a6c31h"; depends=[]; }; - txtq = derive2 { name="txtq"; version="0.0.4"; sha256="0ipfc68m7l72wdnd4lmy7jm2dxs4xayzrd0g58m44dbikgwnw20i"; depends=[base64url filelock fs R6]; }; + txtq = derive2 { name="txtq"; version="0.1.1"; sha256="1nnwxqxmh820b8ksbqk3g7lnf895684k60k5r1ahh105mqccq2x9"; depends=[base64url filelock fs R6]; }; types = derive2 { name="types"; version="1.0.0"; sha256="01shcin8wjbhbmzl979fj3008xqxssw90g3bjg42cnjxkmnaql59"; depends=[]; }; uCAREChemSuiteCLI = derive2 { name="uCAREChemSuiteCLI"; version="0.1.2"; sha256="0nvpmlp8dd250xn3g936wm52s2m6hb82lpvgpdak44ydhhswds0m"; depends=[ChemmineR usethis]; }; - uGMAR = derive2 { name="uGMAR"; version="2.0.2"; sha256="1rbhinq3s818c11kj5ybz1v3xmfpzz55i7mh20a0r3pq64jdh7kc"; depends=[Brobdingnag]; }; + uGMAR = derive2 { name="uGMAR"; version="3.0.1"; sha256="19sxzsz21nysxiydcgm0g4sd40jmqvysrxka0j2zcg7yfmg3hr5w"; depends=[Brobdingnag pbapply]; }; uHMM = derive2 { name="uHMM"; version="1.0"; sha256="1516ipadxi7rc1dbinr5rva2fbcr5i2zg3rlli5wy7r6naf8fzzl"; depends=[chron class cluster clValid corrplot FactoMineR HMM tcltk2 tkrplot]; }; uaparserjs = derive2 { name="uaparserjs"; version="0.1.0"; sha256="1zhz39jrvi64sj0wvwkm4y8gakfp6kz1knw4wn08kk4fa9ymyjvq"; depends=[dplyr purrr V8]; }; - uavRmp = derive2 { name="uavRmp"; version="0.5.3"; sha256="05annx1vzpssxf5ycrgk2dizgl83zbwvl2x3bj8r5d8w5lvlpwrb"; depends=[brew data_table devtools gdalUtils geosphere htmltools htmlwidgets log4r maptools raster rgdal rgeos roxygen2 sf sp spatial_tools stringr zoo]; }; - ubci = derive2 { name="ubci"; version="0.0.2"; sha256="1k2fgzz286qyzqk216saz52s6044zhwgzgv6ra03513vgm9w45ld"; depends=[dplyr httr lubridate magrittr tibble tidyr]; }; + uavRmp = derive2 { name="uavRmp"; version="0.5.4"; sha256="0djx6z9489pr03bf01y2d79ar840q4ffj39j72c8phz27yz40y04"; depends=[brew data_table devtools gdalUtils geosphere htmltools htmlwidgets log4r maptools raster rgdal rgeos roxygen2 sf sp spatial_tools stringr zoo]; }; + ubci = derive2 { name="ubci"; version="0.0.3"; sha256="0pczbasicng6zl44kh61jcx8mbmg2na14q2lni10z1liwwk3swsp"; depends=[dplyr httr lubridate magrittr tibble tidyr]; }; ubeR = derive2 { name="ubeR"; version="0.1.4"; sha256="1ilclna04hd1ykcp2b3gcj0v4qznwx0d24yavxnf2yh5d91wr6z2"; depends=[dplyr ggmap ggplot2 ggthemes googleway httpuv httr jsonlite]; }; ucbthesis = derive2 { name="ucbthesis"; version="1.0"; sha256="0l855if3a7862lxlnkbx52qa617mby634sbb2gkprj21rwd7lcbp"; depends=[knitr stringr]; }; ucminf = derive2 { name="ucminf"; version="1.1-4"; sha256="01vggwg1w71k98qs6fhb0x1843vi322mf4g3hbclks94kcpkisx2"; depends=[]; }; - udapi = derive2 { name="udapi"; version="0.1.1"; sha256="0mhkf1s7pv8d5hbianzcpc3jxps2i6y955n6bplikcz1l1pnb9ib"; depends=[curl httr]; }; - udpipe = derive2 { name="udpipe"; version="0.6"; sha256="0mzqyp3mhcchfknpspc79fmf5sf9n94dxpvssl393p2fd92gkajy"; depends=[data_table Matrix Rcpp]; }; + udapi = derive2 { name="udapi"; version="0.1.3"; sha256="0qyn6fdh8ia913hn2dl0x99xsm20ps8zm52snswlyb00prinm668"; depends=[curl httr]; }; + udpipe = derive2 { name="udpipe"; version="0.7"; sha256="1dmrnlmj3aj01jzhixdkvglqfdsrkqnp52xrvz5pblmwmcdmjflf"; depends=[data_table Matrix Rcpp]; }; udunits2 = derive2 { name="udunits2"; version="0.13"; sha256="0yav7rm2afcx67xqrknybxgz7x63w78zyxa0xifvc0k2gz0d6mfi"; depends=[]; }; - uiucthemes = derive2 { name="uiucthemes"; version="0.2.0"; sha256="1z1wx89b2d7z1a2zc4ai05v9slfpidja8f561jcsrcdi9hz2yp81"; depends=[rmarkdown]; }; + ufs = derive2 { name="ufs"; version="0.0.1"; sha256="0sp4963ijhn5zgni2kcx1shf59p7dr0pigb368fp8b01077q8qqn"; depends=[]; }; + uiucthemes = derive2 { name="uiucthemes"; version="0.2.1"; sha256="1l96mch9r5npsdv1v4qfyj43ana7a2ff7yj04q6fzhh27v0fx7ak"; depends=[rmarkdown]; }; ukbabynames = derive2 { name="ukbabynames"; version="0.1.1"; sha256="0vrwcf3hixd40ag6kb289anq2ys2k6vdhhsrjbizvndkyn8sr0r0"; depends=[]; }; ukbtools = derive2 { name="ukbtools"; version="0.11.0"; sha256="0ww8knrivykk8zx0mqc0bg9f1m64psdpjcxvdn4alhs88ywc71cf"; depends=[data_table dplyr ggplot2 magrittr plyr purrr readr scales stringr tibble tidyr XML]; }; - ukgasapi = derive2 { name="ukgasapi"; version="0.13"; sha256="0bnblha96ldbxj0nqhcj26d1dk2xm6nkjqqval1jlc2pki20mr9n"; depends=[RCurl XML]; }; - umap = derive2 { name="umap"; version="0.1.0.3"; sha256="039pmpbh60m9p3i07mg4gv01p3x4ad0ngpcw76dgarr3yqkx4ic6"; depends=[Rcpp reticulate]; }; + ukgasapi = derive2 { name="ukgasapi"; version="0.15"; sha256="051bavhsqybg0m1nkv52k9vy5a80aanas146ndx0k9dn2mqmpsw7"; depends=[RCurl XML]; }; + umap = derive2 { name="umap"; version="0.2.0.0"; sha256="1qdq3isrv6dqz462sfwk1albbs6h8lcnqidhwr1jxa09bwinhk7q"; depends=[Rcpp reticulate RSpectra]; }; ump = derive2 { name="ump"; version="0.5-8"; sha256="1sg226caq9y41cwl7wr5s9z3bpq2j5p6rj6fy2pasbzimgzw0byx"; depends=[]; }; - umx = derive2 { name="umx"; version="2.8.0"; sha256="06r93dli8rxj0b7kz2s5395xnr8ka4bikdvfda882jjnv2rprdbb"; depends=[cowplot DiagrammeR ggplot2 knitr MASS Matrix mvtnorm nlme numDeriv OpenMx polycor R2HTML RCurl sfsmisc xtable]; }; + umx = derive2 { name="umx"; version="2.8.5"; sha256="1fi4k6asw3rmh88rvdwrf63xi5yqdd9h0bq1bs10j7h9mw9a119j"; depends=[cowplot DiagrammeR ggplot2 knitr MASS Matrix MuMIn mvtnorm nlme numDeriv OpenMx polycor R2HTML RCurl sfsmisc xtable]; }; unbalanced = derive2 { name="unbalanced"; version="2.0"; sha256="18hy9nnq42s1viij0a5i9wzrrfmmbf7y3yzjzymz2wnrx4f2pqwv"; depends=[doParallel FNN foreach mlr RANN]; }; unbalhaar = derive2 { name="unbalhaar"; version="2.0"; sha256="0v6bkin1cakwl9lmv49s0jnccl9d6vdslbi1a7kfvmr5dgy760hs"; depends=[]; }; uncertainty = derive2 { name="uncertainty"; version="0.2.0"; sha256="1mq14ny7l3gy3wjsqijnm37azavyapxszjnckd861h4hgcpdcdjz"; depends=[mvtnorm triangle]; }; uncmbb = derive2 { name="uncmbb"; version="0.2.0"; sha256="0cvbh7a81g52hd2qzp23jwwjd5406iszf4wilgrz8sjfrfgybgfm"; depends=[dplyr rlang]; }; understandBPMN = derive2 { name="understandBPMN"; version="1.1.0"; sha256="11ijxr5nzg6ivx2c9shgba9nfjb8ixypbj8jvhl7zjkwjrpb6f1y"; depends=[devtools dplyr purrr R_utils Rcpp tibble tidyr XML]; }; - unfoldr = derive2 { name="unfoldr"; version="0.6.5"; sha256="18k1bq3vdsiyg55zvs0sx5wgmslxvj283g742rkh214mfy5d89l5"; depends=[]; }; + unfoldr = derive2 { name="unfoldr"; version="0.6.9"; sha256="1zr5k1vcqp16zc9i538fk5gcs900nsl140vx2dpi818jv84md1ij"; depends=[]; }; ungeneanno = derive2 { name="ungeneanno"; version="0.1.6"; sha256="0fm47vmzn4z73pn37p94r84lbkg5amk0sl78304ibwz0rhlda0y5"; depends=[httr XML]; }; + ungroup = derive2 { name="ungroup"; version="1.1.1"; sha256="0jrxxp93ak9bva98j3nmkhrb7znz7lpywk56415k4b2rzpy3j7fs"; depends=[MortalitySmooth pbapply Rcpp RcppEigen Rdpack rgl]; }; uniCox = derive2 { name="uniCox"; version="1.0"; sha256="1glgk6k8gwxk3haqaswd2gmr7a2hgwjkwk2i1qc5ya7gg8svyavv"; depends=[survival]; }; uniReg = derive2 { name="uniReg"; version="1.1"; sha256="0wjc7pgaisvk26j7grxp2ypsabb5my9wg6c9i5w9zhh5jdx1fdab"; depends=[DoseFinding MASS mvtnorm quadprog SEL]; }; uniah = derive2 { name="uniah"; version="1.0"; sha256="19zwy33gwa749i81mi9h05k8k3l4xbbln3k6q70fa7ic5lqbbdzj"; depends=[ahaz Iso survival]; }; unifDAG = derive2 { name="unifDAG"; version="1.0.1"; sha256="1zf2pclddswrssil7ikq75449ks3070jxkzy2lmggq9gyipdypps"; depends=[gmp graph]; }; + uniformly = derive2 { name="uniformly"; version="0.1.0"; sha256="0n3s0x05v4d79jn51nwj06gm074rgy269f57y2q5z0bkwyp6yc7n"; depends=[pgnorm]; }; uniftest = derive2 { name="uniftest"; version="1.1"; sha256="0a37m7l3lc6rznx10w9h9krnn5paim2i2wvw47ckwag7bv0d4pm4"; depends=[orthopolynom]; }; uniqtag = derive2 { name="uniqtag"; version="1.0"; sha256="025q71mzdv3n1jw1fa37bbw8116msnfzcia01p1864si04ch5358"; depends=[]; }; unitedR = derive2 { name="unitedR"; version="0.3.1"; sha256="06plbhjbn1gflpxarn21knhiwfr02vxprak9qcghl30fkkymd02r"; depends=[plyr]; }; unitizer = derive2 { name="unitizer"; version="1.4.5"; sha256="1ml1x9jvwmh8mg2w2j2g8ffibw6a1ihj0aih11zzf4gjhs0w5p9d"; depends=[crayon diffobj]; }; - units = derive2 { name="units"; version="0.6-0"; sha256="06g4ihhxvcc9d28zd1nznd2h5fd8zamq7jcxw6qj0ghb8878mw2n"; depends=[Rcpp]; }; + units = derive2 { name="units"; version="0.6-1"; sha256="0gafl1d89gvmpndmkb9ng7dqhvnb5cx9igza0rjdrdn285icb07i"; depends=[Rcpp]; }; unittest = derive2 { name="unittest"; version="1.3-0"; sha256="0haf3s3pc5bhsm6y5njghr9w8ifsjxczm5r7g0ynylwzvd019n8b"; depends=[]; }; univOutl = derive2 { name="univOutl"; version="0.1-4"; sha256="041cc1jn95zababc4i84c378i204zkn865k2vd7mk1piwm3qkrj5"; depends=[Hmisc robustbase]; }; unix = derive2 { name="unix"; version="1.3"; sha256="1l5w22j0h3qzya13wx7y8lx2baw496vcmn39l2y8r1v38as9dybc"; depends=[]; }; @@ -12330,6 +12878,7 @@ in with self; { unsystation = derive2 { name="unsystation"; version="0.2.0"; sha256="02da7wzzk5bwd475i67v5x04ay2bn5yd5xffl1asqcqxcc5sy0m8"; depends=[doParallel foreach iterators Rcpp RcppArmadillo]; }; untb = derive2 { name="untb"; version="1.7-3"; sha256="1324gn42qxw4cf3jg9vd8nwxiw4w4fg6p2xhzmn636q5wlziln5c"; depends=[Brobdingnag partitions polynom]; }; unvotes = derive2 { name="unvotes"; version="0.2.0"; sha256="0wanvivwm1nmqadq2vapg27kasnjnr0a4np2kw54wj9pg21izqic"; depends=[]; }; + updog = derive2 { name="updog"; version="1.0.1"; sha256="0y2w62f25an1d7fpkiqhimak0ww201r873sjb08akwf82v4k34wz"; depends=[assertthat doParallel foreach ggplot2 ggthemes Rcpp RcppArmadillo stringr]; }; uplift = derive2 { name="uplift"; version="0.3.5"; sha256="11xikfmg6dg8mhwqq6wq9j9aw4ljh84vywpm9v0fk8r5a1wyy2f6"; depends=[coin MASS penalized RItools tables]; }; upmfit = derive2 { name="upmfit"; version="0.1.0"; sha256="0f0rk606v17abgw3mwlwihl6fsxprp44h2xbhv1675i18i36vbgx"; depends=[mcmcplots R2jags]; }; uptasticsearch = derive2 { name="uptasticsearch"; version="0.3.0"; sha256="09g50szxbgc7x2py647lzwmljspks7s6xbbjplbzbpkdc2z4pndh"; depends=[assertthat data_table futile_logger httr jsonlite purrr stringr uuid]; }; @@ -12338,32 +12887,33 @@ in with self; { uqr = derive2 { name="uqr"; version="1.0.0"; sha256="0f7isjfb5almp1zypxzw3lfkygkcixmg0xdsw0zznf61r6qhbqyr"; depends=[gtools Hmisc]; }; urca = derive2 { name="urca"; version="1.3-0"; sha256="1akaqwf3fvvvx4sgfn641fd4sj51s0701pvfl6s5hnz2k0iwh732"; depends=[nlme]; }; urlshorteneR = derive2 { name="urlshorteneR"; version="0.9.2"; sha256="1y5n1rn2c7yj5ncxfnsrj9lvaam2j3vvx8ld1vqyjay1r8flzifd"; depends=[httr jsonlite stringr]; }; - urltools = derive2 { name="urltools"; version="1.7.0"; sha256="0kxv54j4rf8jwyfv3z3plyb9vycwi0m1jv7z2nxnm3729p72y9xl"; depends=[Rcpp triebeard]; }; + urltools = derive2 { name="urltools"; version="1.7.1"; sha256="01h3fwk5mzicy2isvdla9r0zxrxhaf902xx4dg3f16a1l4fgi1a4"; depends=[Rcpp triebeard]; }; uroot = derive2 { name="uroot"; version="2.0-9"; sha256="0nxc8d4v9v5z3wbnj325iq2yrh0mipqgg2rn8pp2jyyq9vb1cxlv"; depends=[]; }; usdm = derive2 { name="usdm"; version="1.1-18"; sha256="1sis47fri2lrbx2ll5ps7bvycjqhncnia800izf11szgayim5lrv"; depends=[raster sp]; }; usedist = derive2 { name="usedist"; version="0.1.0"; sha256="17mldp0888ig2xc8cp1nhldj5g3srwmbx3mfcnzz21n1fz31jkmg"; depends=[]; }; - useful = derive2 { name="useful"; version="1.2.5"; sha256="05198zzlvzmmsic3g6nlxlwivpaszkzx61ximw0v4i4sahblxmp7"; depends=[assertthat dplyr ggplot2 magrittr Matrix plyr purrr scales]; }; - userfriendlyscience = derive2 { name="userfriendlyscience"; version="0.7.1"; sha256="1lkxzd5j51q57m5fqv21y6m37fgjwzjh0hhf940czhlwkk1idyld"; depends=[BiasedUrn car data_tree DiagrammeR digest diptest fBasics GGally ggplot2 ggrepel ggridges GPArotation gridExtra gtable knitr lavaan lme4 MASS MBESS minpack_lm pander plyr psych pwr RColorBrewer rio scales SCRT SuppDists viridis XML xtable]; }; - usethis = derive2 { name="usethis"; version="1.3.0"; sha256="0r61pf8qisjvrshm6jpcb76ck1v79s7lg9zwdgad4fasyyrzrcx2"; depends=[backports clipr clisymbols crayon curl desc gh git2r httr rematch2 rmarkdown rprojroot rstudioapi styler whisker]; }; + useful = derive2 { name="useful"; version="1.2.6"; sha256="0n50v1q75k518sq23id14jphwla35q4sasahrnrnllwrachl67v1"; depends=[assertthat dplyr ggplot2 magrittr Matrix plyr purrr scales]; }; + userfriendlyscience = derive2 { name="userfriendlyscience"; version="0.7.2"; sha256="17arxxha8qr876nrf9szpymgamxlvacj3lfbmpiv973kyi3hr7m4"; depends=[BiasedUrn car data_tree DiagrammeR digest diptest GGally ggplot2 ggrepel ggridges GPArotation gridExtra gtable knitr lavaan lme4 MASS MBESS minpack_lm pander plyr psych pwr RColorBrewer rio scales SCRT SuppDists ufs viridis XML xtable]; }; + usethis = derive2 { name="usethis"; version="1.4.0"; sha256="1gadckx3sxz9gxvpkprj9x7zcgg2nz5m4q0vi76ya9li1v03rwwn"; depends=[clipr clisymbols crayon curl desc fs gh git2r glue rlang rprojroot rstudioapi whisker]; }; usfertilizer = derive2 { name="usfertilizer"; version="0.1.5"; sha256="05zjn39hqjjzzp4v4b1zbqq59205s7k0kikms951h57kbyvjz6vk"; depends=[tidyverse]; }; uskewFactors = derive2 { name="uskewFactors"; version="2.0"; sha256="0ndi5987ak8sa7krgiglsibfg0k7z9j8fg47hg1m8ar0sq4r1yj6"; depends=[MASS MCMCpack mvtnorm tmvtnorm]; }; usl = derive2 { name="usl"; version="1.8.0"; sha256="04w7p9i08a51smgg11kh4hablic5rjmr5hndrnlg49j5h20i7w1v"; depends=[nlsr]; }; - usmap = derive2 { name="usmap"; version="0.3.0"; sha256="0zf3frhdg08fa5m25gln5b7xpbyjr0sbybyih0yd5hgvw0fnk4dm"; depends=[]; }; + usmap = derive2 { name="usmap"; version="0.4.0"; sha256="1sslvh2wbc52dnc9sy8m312amykcl5bvqhws1lvma5d21jn3scmh"; depends=[]; }; ustyc = derive2 { name="ustyc"; version="1.0.0"; sha256="1267bng2dz3229cbbq47w22i2yq2ydpw26ngqa1nbi3ma6hwqsv4"; depends=[plyr XML]; }; utf8 = derive2 { name="utf8"; version="1.1.4"; sha256="0m0ywg8k3blfiahxvh1i4zn9dksrlc937d2lbza5fc38zjnrrnpn"; depends=[]; }; utf8latex = derive2 { name="utf8latex"; version="1.0.4"; sha256="12isrl056h7y7nr7wk52dnvf3frcp66qqy7si869ark2aj81f959"; depends=[]; }; - utility = derive2 { name="utility"; version="1.4.2"; sha256="0q08yc0sxbcjhsr0nkgc2pyxkd93zwlbf0jyq21cf535mj4036gq"; depends=[]; }; + utility = derive2 { name="utility"; version="1.4.3"; sha256="12g2y9xzzi2sl3ya3va1p7nc7hrjhr4arsz06f8xlxw5n8kvdxag"; depends=[]; }; utilsIPEA = derive2 { name="utilsIPEA"; version="0.0.6"; sha256="07avc0j6qkzqmznbydn0zdg743g7g7kn2bcx5n03m3wg0fqyggr7"; depends=[data_table dplyr RCurl stringdist stringr]; }; utiml = derive2 { name="utiml"; version="0.1.4"; sha256="1z93a7ldgkab6hsa9a0hzyhxsbac45sgqn7fy2jh615d2kw7pqr1"; depends=[mldr]; }; uuid = derive2 { name="uuid"; version="0.1-2"; sha256="1gmisd630fc8ybg845hbg13wmm3pk3npaamrh5wqbc1nqd6p0wfx"; depends=[]; }; + uwIntroStats = derive2 { name="uwIntroStats"; version="0.0.7"; sha256="0lihcjd79sqnw64bd2d4p02rl7fmzpyykrdi7b5dsnnwjhr0ks6r"; depends=[Exact geepack plyr sandwich survival]; }; vMask = derive2 { name="vMask"; version="1.0"; sha256="14zfmgidlvlmm9anjcz3wvz4crc24ysq7jj1j1078fp7px5vvr8z"; depends=[]; }; vaersNDvax = derive2 { name="vaersNDvax"; version="1.0.4"; sha256="0hvw7vbxs87c9xkdv3617fkjwz2dbawscbd7dgaixhdhcr3k823a"; depends=[]; }; - vaersvax = derive2 { name="vaersvax"; version="1.0.4"; sha256="15znkwbhr624qgwlcrdhaxpdfl85ym845mr2sy8b016d3ngz7n94"; depends=[]; }; - vagalumeR = derive2 { name="vagalumeR"; version="0.1.1"; sha256="1l1p63yhwqvkh8kgqii9n96vdm86jfc64nrinjp5l7jhx99sn013"; depends=[httr jsonlite plyr stringr]; }; + vaersvax = derive2 { name="vaersvax"; version="1.0.5"; sha256="0bfbpdjnykvb9r0p28bz8lrqxksy4jvwnd28y6gdlprpisiipiic"; depends=[]; }; + vagalumeR = derive2 { name="vagalumeR"; version="0.1.3"; sha256="11f3jk5arpfbjdh1a84iwdr8hn3lq3g03n457lmlhkvl49vh5fq9"; depends=[httr jsonlite plyr stringr]; }; valaddin = derive2 { name="valaddin"; version="0.1.2"; sha256="0j1c3g9gn2j0manz3jjh58cnl7b1rfwm9494xqrfqpia8948p9vq"; depends=[lazyeval purrr]; }; valection = derive2 { name="valection"; version="1.0.0"; sha256="0104zcg3cw57ksgmb321hnyv095mn3frxci9vikj1smwarpnrpzc"; depends=[testthat]; }; validann = derive2 { name="validann"; version="1.2.1"; sha256="00c0hkjiv8n7mksx6sknb4xkkivxr1ml31k697csv4imwrk09dy5"; depends=[moments]; }; - validate = derive2 { name="validate"; version="0.2.5"; sha256="069r6a0l719napmrf37rwi2dvm4ql5ip3g7kba3s96b1qamh8afi"; depends=[settings yaml]; }; + validate = derive2 { name="validate"; version="0.2.6"; sha256="0aadfqk02c3qjzyn0n7g62b5dv1mhyic76xprfa2cdy3sg8vp8jd"; depends=[settings yaml]; }; validateRS = derive2 { name="validateRS"; version="1.0.0"; sha256="1ivw9ddr6z2wrsqvhbn87p5pikhkxlz8p45pb5nq13dvs359vkww"; depends=[data_table reshape2 triangle truncnorm]; }; validatejsonr = derive2 { name="validatejsonr"; version="1.0.4"; sha256="1n8jf7j3hvz47z1x3gqz5yj5wxfjzz0zgzkgckdvy1nbsqf7w3cr"; depends=[Rcpp]; }; validatetools = derive2 { name="validatetools"; version="0.4.3"; sha256="1v6mmk3iq5nzzjkkj1spiqfmqq2133xg2qyy3y8h4pwwfynp4v7c"; depends=[lpSolveAPI validate]; }; @@ -12371,46 +12921,51 @@ in with self; { valottery = derive2 { name="valottery"; version="0.0.1"; sha256="0rlv8agm9ng4jcb9ixqifh7kjczvkx7047brq8yf9kg7rb8mzgpz"; depends=[]; }; valr = derive2 { name="valr"; version="0.4.1"; sha256="0w9hgcyvmny2z1k2phnid60y8qvwbp47dy7q85ppd3j1cxyik5id"; depends=[BH bindrcpp broom dplyr ggplot2 plogr Rcpp readr rlang stringr tibble]; }; valuer = derive2 { name="valuer"; version="1.1.2"; sha256="0mbwzsvy34ppngyxdzpd9w1r4f00cik4maqab9kpiflrrv9xdp78"; depends=[ggplot2 orthopolynom R6 Rcpp RcppEigen timeDate yuima]; }; + vamc = derive2 { name="vamc"; version="0.1.0"; sha256="1rcyj2zsx33rxmhw7p1i45cm6z6380df0bayxlyizi7vh43ggy6p"; depends=[Rdpack]; }; vanddraabe = derive2 { name="vanddraabe"; version="1.0.0"; sha256="0hnfkwrrk50a5rica3lk2d52qi77xya3aspf13g0zygbyvv7ls72"; depends=[bio3d cowplot fastcluster ggplot2 openxlsx reshape2 scales]; }; + vanquish = derive2 { name="vanquish"; version="1.0.0"; sha256="01di1j36npl7vnyhgsagvyf6j8bxcw867dwf9dgi7l1328s7lf0l"; depends=[changepoint e1071 ggplot2 VGAM]; }; + vapour = derive2 { name="vapour"; version="0.1.0"; sha256="0skayxfwr9dqdr0mxj7h0gz08niib9mgv5vgl621fnzw481282fn"; depends=[Rcpp]; }; + varImp = derive2 { name="varImp"; version="0.2"; sha256="1jc6aadcqqrmn5wsh2spq21nc20jpfdh9rspzsk99aymnv46sdyv"; depends=[measures party]; }; varSel = derive2 { name="varSel"; version="0.1"; sha256="0ddj3swfxzchs75kfi6h25h3c33hpapnd5kcwcijnqhlh902b1r0"; depends=[]; }; varSelRF = derive2 { name="varSelRF"; version="0.7-8"; sha256="0h49rl1j13yfh97rsfsyh9s2c4wajny4rzms2qw77d0cavxqg53i"; depends=[randomForest]; }; varband = derive2 { name="varband"; version="0.9.0"; sha256="16z66rx7xq5zan8pnw100c9r5syw1ml4hgzi9mch52aia23v21p9"; depends=[Rcpp RcppArmadillo]; }; + varbin = derive2 { name="varbin"; version="0.2.1"; sha256="0gcynwc0vx7qlp3z0pcc4i7mjlnxkwy8ydxz2wr244fw32qgp4kq"; depends=[rpart]; }; varbvs = derive2 { name="varbvs"; version="2.4-0"; sha256="0f6c9acrir8c8m8mg928azlp31yh49faz5s2g7cbgf5f1pxi07nl"; depends=[lattice latticeExtra Matrix Rcpp]; }; vardiag = derive2 { name="vardiag"; version="0.2-1"; sha256="07i0wv84sw035bpjil3cfw69fdgbcf2j8wq4k22narkrz83iyi2z"; depends=[]; }; - vardpoor = derive2 { name="vardpoor"; version="0.10.0"; sha256="0v1l6rw8in0nr1a7g1mgfimjxjzjww174y8vxvmgirlifnnjxkc8"; depends=[data_table foreach laeken MASS plyr stringr surveyplanning]; }; + vardpoor = derive2 { name="vardpoor"; version="0.12.0"; sha256="1a6s2zip5lks4yfmpdiplqzfx97xsfyhr61yizvmm0yrnwr1a4g9"; depends=[data_table foreach ggplot2 laeken MASS plyr pracma stringr surveyplanning]; }; varhandle = derive2 { name="varhandle"; version="2.0.3"; sha256="11yisjgqc8fq0sj1kzgp51i926cs4yqkpfmbis5ak786wqalc6na"; depends=[]; }; - variables = derive2 { name="variables"; version="1.0-0"; sha256="0i1nmrbps1snyzdwlki7sfxf2vpqghd9ap8pmy235d5r399jmpkb"; depends=[]; }; + variables = derive2 { name="variables"; version="1.0-1"; sha256="05bqhkzava24z7dqg79vf9144d226rr5mby6ry32lqyx7w0gql9x"; depends=[]; }; varian = derive2 { name="varian"; version="0.2.2"; sha256="0jyw46qx2w19h02mrwv3w3n8qc1n4b3ckm38qly1y4a4w9ib6c2i"; depends=[Formula ggplot2 gridExtra MASS rstan]; }; variosig = derive2 { name="variosig"; version="0.1"; sha256="191d4f52z686s8xbx7aw9c3qjp77iri43l52n8nxjgfjl877x5m4"; depends=[geoR gstat sp]; }; varjmcm = derive2 { name="varjmcm"; version="0.1.0"; sha256="02l0d896faakh9pdq2rzl2psmrj7l2pvacz7nk3r6552glsk7h18"; depends=[expm jmcm MASS Matrix]; }; varrank = derive2 { name="varrank"; version="0.1"; sha256="1ynpnzfvwbwfpcv7rqlkvxmmafnjgdssr5l42rr3bklm9j1z71vm"; depends=[FNN]; }; - vars = derive2 { name="vars"; version="1.5-2"; sha256="1q45z5b07ww4nafrvjl48z0w1zpck3cd8fssgwgh4pw84id3dyjh"; depends=[lmtest MASS sandwich strucchange urca]; }; + vars = derive2 { name="vars"; version="1.5-3"; sha256="0zc6v827ll19n088n31afgjf65zqwvyzmmj4q3ab1xhqzxfsgbw6"; depends=[lmtest MASS sandwich strucchange urca]; }; vbdm = derive2 { name="vbdm"; version="0.0.4"; sha256="1rbff0whhbfcf6q5wpr3ws1n4n2kcr79yifcni12vxg69a3v6dd3"; depends=[]; }; vbsr = derive2 { name="vbsr"; version="0.0.5"; sha256="1avskbxxyinjjdga4rnghcfvd4sypv4m39ysfaij5avvmi89bx3b"; depends=[]; }; vcd = derive2 { name="vcd"; version="1.4-4"; sha256="1lp99h0wvsc61l1dgcqjxdrcgpgw88ak430cdsv43kmm43qssqd5"; depends=[colorspace lmtest MASS]; }; vcdExtra = derive2 { name="vcdExtra"; version="0.7-1"; sha256="163x9hhvhgdmrqbcig7b120lk63svy0y652scbrcb11f85zrgb0c"; depends=[ca gnm MASS vcd]; }; vcfR = derive2 { name="vcfR"; version="1.8.0"; sha256="1684lamsivwaqzvmwzhrrziwczkaqn3mhbdr86zbjdhr1jcgkz2z"; depends=[ape dplyr magrittr memuse pinfsc50 Rcpp stringr tibble vegan viridisLite]; }; vcov = derive2 { name="vcov"; version="0.0.1"; sha256="1w89mr8dk6436bxap28rszajgm9k7sjfqsr1i4p68dlhw8zk4yq1"; depends=[]; }; - vcr = derive2 { name="vcr"; version="0.1.0"; sha256="1f0hjfip7k9gd7lbaqk97idan2qfns7yiw6rsxp8q7szmjyhb6ga"; depends=[base64enc crul lazyeval R6 urltools webmockr yaml]; }; + vcr = derive2 { name="vcr"; version="0.2.0"; sha256="1zr94hxch8k8pcgpm43fip8wrlqswb0pjv0py66rpf9nn08nwjvy"; depends=[base64enc crul httr lazyeval R6 urltools webmockr yaml]; }; vcrpart = derive2 { name="vcrpart"; version="1.0-2"; sha256="1xfvsxgyf39d2qxnm40nzkqp7q12y8nbpn9h154n876zxxfs7gh1"; depends=[formula_tools nlme numDeriv partykit rpart sandwich strucchange ucminf zoo]; }; vdg = derive2 { name="vdg"; version="1.2.0"; sha256="1hi5d14nh9q784sbdk018awrawh9f1aix0wl26x7n0xb4707rcmy"; depends=[ggplot2 gridExtra proxy quantreg]; }; vdiffr = derive2 { name="vdiffr"; version="0.2.3"; sha256="0rsznvbymlwdjl9qdll98x8cqkf8rdi20c5sw4w547sfxr664yl0"; depends=[devtools fontquiver gdtools glue htmlwidgets purrr R6 Rcpp rlang shiny svglite testthat xml2]; }; - vdmR = derive2 { name="vdmR"; version="0.2.5"; sha256="1v96khvg3k33kg3aavanl8g05n5mjkbqsbf8c4lya73f3rs4sfgb"; depends=[broom dplyr GGally ggplot2 gridSVG maptools plyr Rdpack rgdal rgeos rjson Rook sp]; }; + vdmR = derive2 { name="vdmR"; version="0.2.6"; sha256="15d3yrwiqs7cfyzl6v5vqgi33arx9lxjbqpif9zzfb56j0x1xsk5"; depends=[broom dplyr GGally ggplot2 gridSVG maptools plyr Rdpack rgdal rgeos rjson Rook sp]; }; vec2dtransf = derive2 { name="vec2dtransf"; version="1.1"; sha256="029xynay9f9rn0syphh2rhd3szv50ib4r0h0xfhhvbbb37h5dc9s"; depends=[sp]; }; veccompare = derive2 { name="veccompare"; version="0.1.0"; sha256="03nyyxvhhwfxxg5w6qflk7q234ipbhj9fd4abcp50sxz3diabch1"; depends=[corrplot gtools pander purrr qgraph reshape2 VennDiagram]; }; vecsets = derive2 { name="vecsets"; version="1.2.1"; sha256="086af6swjpbkd140yvb76affy5gn4p9xm41m3akm8axc3qk0hybg"; depends=[]; }; vegalite = derive2 { name="vegalite"; version="0.6.1"; sha256="0dlzhvrg3nj6knyycdgg3d1vzq3dn9vxb34fjin9hzilszqmarbk"; depends=[base64 clipr digest htmltools htmlwidgets jsonlite magrittr webshot]; }; - vegan = derive2 { name="vegan"; version="2.5-2"; sha256="13pyqvlpz64qibi8k5d109v7q09j06mbv6ndix3n4cn21mjx391c"; depends=[cluster lattice MASS mgcv permute]; }; - vegan3d = derive2 { name="vegan3d"; version="1.1-1"; sha256="1jd9m2immkhgb1zr39gsgl746y7qpi5fhj8awmqq5lyr5j6jp6jh"; depends=[cluster rgl scatterplot3d vegan]; }; + vegan = derive2 { name="vegan"; version="2.5-3"; sha256="023xznh0iy0496icpchadmp7a3rk3nj9s48fvwlvp3dssw58yp3c"; depends=[cluster lattice MASS mgcv permute]; }; + vegan3d = derive2 { name="vegan3d"; version="1.1-2"; sha256="01yyhrapdvs6rr5hw1ij4jnpz7mq005s35pn96snpy8ngn6ir386"; depends=[cluster rgl scatterplot3d vegan]; }; vegclust = derive2 { name="vegclust"; version="1.7.4"; sha256="1fz3p5jpqy99r601dj9fahgv32vw0v54jlrq48wn81rzg2wwfmk7"; depends=[Kendall Rcpp sp vegan]; }; - vegdata = derive2 { name="vegdata"; version="0.9.1"; sha256="0w4dk7qcl89w04qgnlna5lk5hxnyrvwmgjjxmnvb6r5dspq7qyad"; depends=[foreign httr jsonlite XML]; }; + vegdata = derive2 { name="vegdata"; version="0.9.5"; sha256="145frmlsdb7m5z8qa03js4061pqmgvy3gykxkpiv1wv2wnfzyvnr"; depends=[foreign XML]; }; vegetarian = derive2 { name="vegetarian"; version="1.2"; sha256="15ys1m8p3067dfsjwz6ds837n6rqd19my23yj8vw78xli3qmn445"; depends=[]; }; vegtable = derive2 { name="vegtable"; version="0.1.3"; sha256="1pjbqhc09bmyjxx21z01dysbvwbx7v0mxm9xbcmfxdmr10adhian"; depends=[foreign plotKML qdapRegex sp stringi taxlist vegdata]; }; - vein = derive2 { name="vein"; version="0.3.35"; sha256="0jmsr7vw2p7r6z3s1kqkrnkd5f0w6mjzv2ln3s446c1z3bmvv5zv"; depends=[data_table eixport sf sp units]; }; + vein = derive2 { name="vein"; version="0.5.2"; sha256="1iwmh8kd4sa4bby9vycsg6wby63yri3vj310q3kvkd8b7k7z2vlw"; depends=[data_table eixport sf sp units]; }; velociraptr = derive2 { name="velociraptr"; version="1.0"; sha256="1n7q08i37qbbh5cjq6jb4gmpzzip3wx2wx8xx5wpkln8n3nyiqki"; depends=[RCurl rgdal]; }; velox = derive2 { name="velox"; version="0.2.0"; sha256="1jrarfsfflvpc0dqh5gnw92fk8zic222n7pr7hd0lhr5d389k6d0"; depends=[BH raster Rcpp rgdal rgeos sf sp]; }; vembedr = derive2 { name="vembedr"; version="0.1.3"; sha256="0zg6j0g9l7j36ifwabhxrin5z0dics66bqkc7x6rqijmizk1xpba"; depends=[htmltools httr magrittr stringr]; }; - venn = derive2 { name="venn"; version="1.6"; sha256="0ipfysb9kjq07rvf6szy1cci4waw905bavk9bs60aii5858k9rcs"; depends=[]; }; + venn = derive2 { name="venn"; version="1.7"; sha256="0lll5bcwx64di4m0k56f00vsfaas2l2mkcbblniq302v0g12v8cj"; depends=[]; }; vennLasso = derive2 { name="vennLasso"; version="0.1.2"; sha256="1lma34msdl8ik0375bh4adbfgvcy0crv29gpsk7p6x75464jsp9y"; depends=[foreach igraph MASS Matrix Rcpp RcppEigen RcppNumerical survival VennDiagram visNetwork]; }; venneuler = derive2 { name="venneuler"; version="1.1-0"; sha256="10fviqv9vr7zkmqm6iy2l9bjxglf2ljb7sx423vi4s9vffcxjp17"; depends=[rJava]; }; vennplot = derive2 { name="vennplot"; version="1.0"; sha256="0x59awa1zsjwk5qb1jzv6d2mn2fm4aq1lq8zlbnf1da0h4837yab"; depends=[Rcpp rgl stringr]; }; @@ -12419,29 +12974,29 @@ in with self; { vertexenum = derive2 { name="vertexenum"; version="1.0.2"; sha256="16ywz3z1kzhb3knhhi2i5igm3djdaaxyyrw69wkc5saa7ayhdb4y"; depends=[numbers]; }; vesselr = derive2 { name="vesselr"; version="0.2.1"; sha256="1wzprnpiv04gxhqgki36gp1a0xj9l3mchllphwkfsdja4axq3prk"; depends=[oro_nifti pbapply pbmcapply]; }; vetools = derive2 { name="vetools"; version="1.3-28"; sha256="1470xgqdq9n5kj86gdfds15k3vqidk3h99zi3g76hhyfl8gyl1c0"; depends=[lubridate maptools plyr scales sp stringr tis xts]; }; - vetr = derive2 { name="vetr"; version="0.2.5"; sha256="164zs1bxhkjzicip95lhyb2yi4hgg08zm6i18z6g4bjgn1ban1id"; depends=[]; }; + vetr = derive2 { name="vetr"; version="0.2.6"; sha256="02sa0l4dh0n066y0ls377dh6q4fdhlx2jj80gk5c5x9l5ms649xk"; depends=[]; }; vfcp = derive2 { name="vfcp"; version="1.4.0"; sha256="0zj1ihqdx5x1695al1xyi8k001yw8x7gdss72myxlnh7b4flnp9m"; depends=[copula extraDistr stringr]; }; vhica = derive2 { name="vhica"; version="0.2.4"; sha256="0km49lrzn9rm3wxadwxc290dvx3bsblbmna7f9lnkq6g1z5jdqwg"; depends=[]; }; vietnamcode = derive2 { name="vietnamcode"; version="0.1.1"; sha256="0vc0c1fg30afar2dkch5h27b8jbglcd9ja6d5hcypnibqz4c68vz"; depends=[]; }; - vimp = derive2 { name="vimp"; version="1.0.0"; sha256="0q92zgs52nxrxswnvascbpfvg51hvy08cwjy2vjjvzjydicsfnxh"; depends=[SuperLearner]; }; - vinereg = derive2 { name="vinereg"; version="0.3.0"; sha256="05vd9ilnx9cswsa21bnw6p5q44yyc7adm4xh966dnsdrsdj6dd7s"; depends=[cctools furrr future kde1d rvinecopulib]; }; + vimp = derive2 { name="vimp"; version="1.1.4"; sha256="146z6xismk97613cdiz508hn0mgg0w0rqnjb9as66sq57kqgn5yn"; depends=[SuperLearner]; }; + vinereg = derive2 { name="vinereg"; version="0.5.0"; sha256="17qni21jaizmfzl975xd39ahlc5flfnmy6xy7n9adfv346f3zwp0"; depends=[cctools furrr future kde1d rvinecopulib]; }; vines = derive2 { name="vines"; version="1.1.5"; sha256="057d2fdh03cq9kh4vz94arqscahmz14xbr2g59l0vn205lnyilf1"; depends=[ADGofTest copula cubature TSP]; }; violinmplot = derive2 { name="violinmplot"; version="0.2.1"; sha256="1j3hb03y988xa704kp25v1z1pmpxw5k1502zfqjaf8cy4lr3kzsc"; depends=[lattice]; }; vioplot = derive2 { name="vioplot"; version="0.2"; sha256="16wkb26kv6qr34hv5zgqmgq6zzgysg9i78pvy2c097lr60v087v0"; depends=[sm]; }; viopoints = derive2 { name="viopoints"; version="0.2-1"; sha256="0cpbkkzm1rxch8gnvlmmzy8g521f5ang3nhlcnin419gha0w6avf"; depends=[]; }; - vip = derive2 { name="vip"; version="0.1.0"; sha256="1blyyy17f4gxhbw7jwwf0xrq4ha142k356dfhasnvk4jqrpajcxc"; depends=[dplyr ggplot2 gridExtra magrittr pdp plyr tibble tidyr]; }; + vip = derive2 { name="vip"; version="0.1.2"; sha256="1y4v0qd7qag9jw9vazlnl3hp4813lcbhmbq60s3znhdmxnbb4irw"; depends=[ggplot2 gridExtra magrittr ModelMetrics pdp plyr tibble]; }; vipor = derive2 { name="vipor"; version="0.4.5"; sha256="112gc0d7f8iavgf56pnzfxb7hy75yhd0zlyjzshdcfbnqcd2a6bx"; depends=[]; }; viridis = derive2 { name="viridis"; version="0.5.1"; sha256="060rf1jn29dq53y3nhb0hykvcap6rqsk04rq544ypiiqb18ngwnx"; depends=[ggplot2 gridExtra viridisLite]; }; viridisLite = derive2 { name="viridisLite"; version="0.3.0"; sha256="1by2l05f0yabwvv64lhnv7bbhx0w683s3wr9j2xda920ghpa23kq"; depends=[]; }; - virtualspecies = derive2 { name="virtualspecies"; version="1.4-2"; sha256="19qw8vqf08x6fgm8w159qabpgr2wv2cxishpj6888ihcaa9ykp8f"; depends=[ade4 dismo raster rworldmap]; }; + virtualspecies = derive2 { name="virtualspecies"; version="1.4-4"; sha256="04byc39id5vn22h06b0yqb08bxnpsfdgig4v5r8hjv240c0p8q91"; depends=[ade4 raster rworldmap sp]; }; virustotal = derive2 { name="virustotal"; version="0.2.1"; sha256="0lky75al8zcvmfgx7a2s3bij8ya4avdsnv046lk7564zfd8rbymw"; depends=[httr plyr]; }; visNetwork = derive2 { name="visNetwork"; version="2.0.4"; sha256="05gdsma70zvkgly9qscbwy98x8zrqgsk93czb37jp0as365l00q5"; depends=[htmltools htmlwidgets jsonlite magrittr]; }; visdat = derive2 { name="visdat"; version="0.5.1"; sha256="1vnfwldzq5ddqk8prj4cg0dmkbjhpchdkb6v8kicd876dv8vxy2q"; depends=[dplyr ggplot2 magrittr plotly purrr readr rlang tibble tidyr]; }; visreg = derive2 { name="visreg"; version="2.5-0"; sha256="0n19k6rsmpqga6r8lyhjviqs3nw881dhr211621m2cl7knqhhi4y"; depends=[lattice]; }; - vistime = derive2 { name="vistime"; version="0.5.0"; sha256="1h7dm66m0qx3hmfx1hlv5na65swdhdykyg1fsqzgnjl6p98cg81j"; depends=[plotly RColorBrewer]; }; + vistime = derive2 { name="vistime"; version="0.6.0"; sha256="1ah3zwz2ikzd8y2rbff65mdd9lp4yd328mb2971afr2xdd9gvvqd"; depends=[plotly RColorBrewer]; }; visualFields = derive2 { name="visualFields"; version="0.5.4"; sha256="19fb1qq4kyhln21dmf7wm6kqf7g94ls7nsaspl2q9d3rlmcgz5h3"; depends=[deldir flip gtools Hmisc matrixStats spatstat]; }; visualize = derive2 { name="visualize"; version="4.3.0"; sha256="1s49sx828f25d4n93mn28xdbc81zflk2sr3h8ffs2mkjr888qd8y"; depends=[]; }; - visvow = derive2 { name="visvow"; version="0.1.0"; sha256="0nb849m6dqfanqlaqcargw0rlf4ch9v09zmf0zqmxkwcil0w0dka"; depends=[Cairo DT ggplot2 plot3D plyr pracma psych Rdpack readxl shiny shinyBS svglite WriteXLS]; }; + visvow = derive2 { name="visvow"; version="0.2.0"; sha256="1518vhvhx64k18sf003j5bafhdpkx4m8hahvksgcp2a1n3660l1i"; depends=[Cairo DT ggdendro ggplot2 ggrepel MASS plot3D plyr pracma psych Rdpack readxl Rtsne shiny shinyBS svglite WriteXLS]; }; vita = derive2 { name="vita"; version="1.0.0"; sha256="114p2lzcr8rn68f0z4kmjdnragqlmi18axda9ma4sbqh8mrmjs9v"; depends=[randomForest Rcpp]; }; vitality = derive2 { name="vitality"; version="1.3"; sha256="17micfmlksnw167vavvhlk431fm20k74y5ggs47pgz5fwpm854zp"; depends=[]; }; vkR = derive2 { name="vkR"; version="0.1"; sha256="0rb66am3y009wli8ykl58i02kzm6cdqz5v5d4vvzlbngz8crdkyy"; depends=[httr jsonlite XML]; }; @@ -12453,13 +13008,13 @@ in with self; { vortexRdata = derive2 { name="vortexRdata"; version="1.0.3"; sha256="1pq910xaqk6d5amg8hj7xagb5wn2ahfrmqairf3vhwqx55lhjbg1"; depends=[]; }; vosonSML = derive2 { name="vosonSML"; version="0.23.4"; sha256="0y2jyrkld02ksn2ipkkxzc724dhbqbja120gg7sm67v6x444pma7"; depends=[bitops data_table Hmisc httpuv httr igraph instaR plyr RCurl Rfacebook rjson stringr tm twitteR]; }; vote = derive2 { name="vote"; version="1.1-0"; sha256="1kxbv4062g4x9vn4gh74c6zwdshysw5n7vx9qljhq2wrdnqzjpyg"; depends=[formattable knitr]; }; - voteogram = derive2 { name="voteogram"; version="0.2.0"; sha256="0m4j7iz7mc6z536vk0kmqfd8ank87ingv5vnjl7mn62r53c5fbsf"; depends=[dplyr ggplot2 jsonlite scales]; }; + voteogram = derive2 { name="voteogram"; version="0.3.1"; sha256="12xv0c3g4vr23c8adkk8z7m7sx31w5mjvdg9h4qbvaimb99p2r7z"; depends=[dplyr ggplot2 jsonlite scales]; }; votesys = derive2 { name="votesys"; version="0.1.1"; sha256="1z7cx3rj3bfrkb6jkmf1m1wad5ff46zrab5vhk69wf3jbwd9h920"; depends=[data_table gtools Matrix]; }; vottrans = derive2 { name="vottrans"; version="1.0"; sha256="1fp7jrw072ws39bqsg88bm2qndcv68aa2vdqwgnza58p1dfq3x9f"; depends=[quadprog]; }; vowels = derive2 { name="vowels"; version="1.2-2"; sha256="0xhfn3avx9h6kg3jwd47n2x7w8q8c9h13wsxd74hhbbn2gkjrs84"; depends=[]; }; vows = derive2 { name="vows"; version="0.5"; sha256="06akjdbab9v7r47di7syvcm7gf4k81djizg8maszs5l1ksyhmv6b"; depends=[fda gamm4 mgcv oro_nifti RLRsim shape stringr]; }; voxel = derive2 { name="voxel"; version="1.3.5"; sha256="1xlym8xc22dq67h0lylrr16z7b4zdidpgrkvbs7n9fnkh6vijw2j"; depends=[gamm4 ggplot2 lmerTest mgcv oro_nifti purrr]; }; - vpc = derive2 { name="vpc"; version="1.0.1"; sha256="0zxiakls7wi0278f6v74xdcaw500am8gfs8lp7cciaxnw2clvsbv"; depends=[classInt dplyr ggplot2 MASS readr reshape2 survival]; }; + vpc = derive2 { name="vpc"; version="1.1.0"; sha256="15ws6zfizyryn3bvjvs053n81k2g9k641dqmwvgy152bsg7w7fwx"; depends=[classInt dplyr ggplot2 MASS readr reshape2 survival]; }; vqtl = derive2 { name="vqtl"; version="2.0.4"; sha256="1jp7h2afnfgn8i65qg64lwbjw56s37w8fgwfajcgxn2mwb5z0jcb"; depends=[dglm doParallel dplyr evd foreach ggplot2 gtools iterators knitr lazyeval purrr qtl stringr testthat tidyr]; }; vrcp = derive2 { name="vrcp"; version="0.1.1"; sha256="1wrch1dqy752gkj24h1dgi2x3kf1797xj4pf1s9mszf3x3ic905d"; depends=[ggplot2]; }; vrmlgen = derive2 { name="vrmlgen"; version="1.4.9"; sha256="0lifhhf41yml4k83wpkssl14jgn8jaw1lcknwbci1sd8s1c4478l"; depends=[]; }; @@ -12467,7 +13022,7 @@ in with self; { vscc = derive2 { name="vscc"; version="0.2"; sha256="1p14v8vd8kckd44g4dvzh51gdkd8jvsc4bkd2i4csx8vjiwrni5w"; depends=[mclust teigen]; }; vsgoftest = derive2 { name="vsgoftest"; version="0.3-2"; sha256="020kghcfv8h0i7fzq3p2grhhbwvqmc9ya9r7lc1kiqg1bfgljg91"; depends=[fitdistrplus Rcpp]; }; vstsr = derive2 { name="vstsr"; version="1.0.0"; sha256="0flsw5yw1vmj5x866klxmjqz5aimkvjiwl1zdciz63p9zffmb4gz"; depends=[httr jsonlite magrittr R6 RCurl xml2]; }; - vtreat = derive2 { name="vtreat"; version="1.2.2"; sha256="06r8ib4l3cyxrx8ykkvjj7ycrjsrv5d5y0lm6zj12lc9l298zj49"; depends=[wrapr]; }; + vtreat = derive2 { name="vtreat"; version="1.3.1"; sha256="00iwxfn42zanhs2bwk73731nzwzpjwb127dig91dqhdsvng9585s"; depends=[wrapr]; }; vudc = derive2 { name="vudc"; version="1.1"; sha256="0zxz6n3ixa3xjzcinky8ymqjx9w8y8z65mz8d84dl00mxzkmkz4h"; depends=[]; }; vwr = derive2 { name="vwr"; version="0.3.0"; sha256="1h790vjcdfngs1siwldvqz8jrxpkajl3266lzadfnmchfan1x7xv"; depends=[lattice latticeExtra stringdist]; }; wBoot = derive2 { name="wBoot"; version="1.0.3"; sha256="08qgkkv6jvqmxq5gvfp7jbrc3k8mxajfww7k8a3p8888aq411p7q"; depends=[boot simpleboot]; }; @@ -12476,24 +13031,25 @@ in with self; { wNNSel = derive2 { name="wNNSel"; version="0.1"; sha256="19j2yz6lvkxpmjr0vv6pjc7j1c02y0hb3gay5sy1y0xk706aggb5"; depends=[]; }; wPerm = derive2 { name="wPerm"; version="1.0.1"; sha256="0f3v0kba87wkwyii0pzvs6a8ja897aifpvwkvryl2hzxxxaml7z4"; depends=[]; }; wSVM = derive2 { name="wSVM"; version="0.1-7"; sha256="0c7rblzgagwfb8mmddkc0nd0f9rv6kapw8znpwapv3fv0j2qzq7h"; depends=[MASS quadprog]; }; - wTO = derive2 { name="wTO"; version="1.6.1"; sha256="0iw5vg3qpjgyx6n2p10a2ma9dpcm1hchvrm2brh1a0j1xmjwpsrl"; depends=[data_table igraph magrittr plyr reshape2 shiny som visNetwork]; }; + wTO = derive2 { name="wTO"; version="1.6.2"; sha256="04393rwl74m8qj89kcsnyayvhwkf9bynga33pc09spvjnpnfjj14"; depends=[data_table igraph magrittr plyr reshape2 shiny som visNetwork]; }; waccR = derive2 { name="waccR"; version="0.1.0"; sha256="092p1bibyqx1gcrch68l9ilzilg5aqf46b6iagm562292cfi074l"; depends=[dplyr lubridate magrittr rvest tibble xml2]; }; waffect = derive2 { name="waffect"; version="1.2"; sha256="0r5dvm0ggyxyv81hxdr1an658wkqkhqq2xaqzqpnh4sh4wbak35a"; depends=[Rcpp]; }; waffle = derive2 { name="waffle"; version="0.7.0"; sha256="1qjmai33p96cyavi9lgi6k30h6fj7db5sr569v9jf4kwx92c61df"; depends=[extrafont ggplot2 gridExtra gtable RColorBrewer]; }; wahc = derive2 { name="wahc"; version="1.0"; sha256="1324xhajgmxq6dxzpnkcvxdpm2m3g47drhyb2b3h227cn3aakxyg"; depends=[]; }; wakefield = derive2 { name="wakefield"; version="0.3.3"; sha256="05z9a6g1cdavalp50wss7klnlcdbv3y1jvz1v8ry1x2bziy216y2"; depends=[chron dplyr ggplot2 stringi]; }; walkalytics = derive2 { name="walkalytics"; version="0.1.0"; sha256="1kl6kwwnl67d45akna01xp389wjxsxlc84l0bcpadbipsqyb3kd1"; depends=[base64enc dplyr httr purrr sp stringr tibble]; }; - walker = derive2 { name="walker"; version="0.2.1"; sha256="1q99nny7mdh7wc3yj4dz0s2454aqyxjcsp5hpjrha14h4p3fcirf"; depends=[bayesplot BH dplyr ggplot2 KFAS Rcpp RcppArmadillo RcppEigen rstan StanHeaders]; }; + walker = derive2 { name="walker"; version="0.2.3"; sha256="0wnrqlkv6nrl2mb3pxmvv1fahx0vv4jcr86lhxhwgvjgff50idfl"; depends=[bayesplot BH dplyr ggplot2 KFAS Rcpp RcppArmadillo RcppEigen rstan StanHeaders]; }; walkr = derive2 { name="walkr"; version="0.3.4"; sha256="01278hfa9mppwqmr54826gb65pswhqbh7ai8ij6m4ncc0fk6pvvd"; depends=[ggplot2 hitandrun limSolve MASS Rcpp RcppEigen shinystan]; }; walkscoreAPI = derive2 { name="walkscoreAPI"; version="1.2"; sha256="1c2gfkl5yl3mkviah8s8zjnqk6lnzma1yilxgfxckdh5wywi39fx"; depends=[]; }; - wallace = derive2 { name="wallace"; version="1.0.5"; sha256="1c3ghc5prkw44sq93klj1cfgllsz3830y78i4b1y6r23bj2z9520"; depends=[dismo dplyr DT ENMeval leaflet leaflet_extras magrittr maptools raster RColorBrewer rgdal rgeos rmarkdown shiny shinyjs shinythemes spocc spThin testthat XML]; }; + wallace = derive2 { name="wallace"; version="1.0.6"; sha256="0pnkwdfmimnvyygbz1iz1b9fhcdi7k53wjw44kmnr2b7ln9pbcl2"; depends=[dismo dplyr DT ENMeval leaflet leaflet_extras magrittr maptools raster RColorBrewer rgdal rgeos rmarkdown shiny shinyjs shinythemes spocc spThin XML zip]; }; wally = derive2 { name="wally"; version="1.0.9"; sha256="1g6dywny8s8fpdnfvrlbzsp9d9dhxdxrm1j4dd3b9r6rpiajf964"; depends=[data_table prodlim riskRegression]; }; walmartAPI = derive2 { name="walmartAPI"; version="0.1.5"; sha256="1nng8izncj2nmmpywn1ggpzvjh8q7y3q6260qhy9kbmvrrl26spf"; depends=[dplyr glue httr magrittr purrr stringr tibble]; }; walrus = derive2 { name="walrus"; version="1.0.3"; sha256="1nk2glcvy4hyksl5ipq2mz8jy4fss90hx6cq98m3w96kzjni6jjj"; depends=[ggplot2 jmvcore R6 WRS2]; }; wand = derive2 { name="wand"; version="0.2.0"; sha256="1p2r96nyr36jv418xi4j2ldarymb4xmpis6d2iz7mq9755kb4fnh"; depends=[dplyr purrr rappdirs Rcpp stringi tibble tidyr]; }; - warbleR = derive2 { name="warbleR"; version="1.1.14"; sha256="0wr0m950y404chh8gipx1v5mvldypm0iwyiqn4ypz5143fzlhwih"; depends=[bitops dtw fftw iterators jpeg maps monitoR NatureSounds pbapply pracma RCurl rjson seewave Sim_DiffProc tuneR]; }; + warbleR = derive2 { name="warbleR"; version="1.1.15"; sha256="1vd2yvb1crzxbrbfk8iv31ir09xc646m8glfgqkgazhnj0y6l6yr"; depends=[bioacoustics bitops dtw fftw iterators jpeg maps monitoR NatureSounds pbapply pracma RCurl rjson seewave Sim_DiffProc soundgen tuneR]; }; warpMix = derive2 { name="warpMix"; version="0.1.0"; sha256="13zbl4aifhg7j5b3vpwgzgs09hr7yblz0rckmj5qh40s78j8cpfn"; depends=[fda fields lme4 MASS nlme reshape2]; }; washdata = derive2 { name="washdata"; version="0.1.2"; sha256="01cnlhymh3qg9c7fda8s6lvm4j2vklmb72dfk17sn4p0kkikf9m8"; depends=[]; }; + washeR = derive2 { name="washeR"; version="0.1.2"; sha256="0sb5sgwf7y9sd291qfj1az3x6h6gmznnnsdmqizkmv2xz9029rxz"; depends=[gplots]; }; wasim = derive2 { name="wasim"; version="1.1.2"; sha256="1zydzw7cihhdwv0474fnc4lgaq5fwrv8jinz79vkbidbgcy7i2fd"; depends=[fast MASS qualV tiger]; }; water = derive2 { name="water"; version="0.8"; sha256="0qglf922dlgi41jzz3sivq7ckmzl8axqjfg4klcgnddycmm3ha5j"; depends=[raster rgdal sp]; }; waterData = derive2 { name="waterData"; version="1.0.8"; sha256="0884agh876wf3qlbc75fbaa47x2iwvncz7r2l25qw34n8lxq1yr6"; depends=[dataRetrieval lattice latticeExtra lubridate xml2]; }; @@ -12511,33 +13067,35 @@ in with self; { wbstats = derive2 { name="wbstats"; version="0.2"; sha256="0rfc9c6892jq7y17dwp6vsn62ggnac964xndmxq3mip6k2pk8yi0"; depends=[httr jsonlite tidyr]; }; wbsts = derive2 { name="wbsts"; version="2.0"; sha256="12k68nsrrxglrm9ik53rm8160xvjlsgzi7v4wp78jhmh2slmyxw3"; depends=[mvtnorm Rcpp wmtsa]; }; wdm = derive2 { name="wdm"; version="0.1.1"; sha256="0mr901l2378dyygdhc5agx93lm46a44fs3kr3ax2wnv1cdhmc379"; depends=[Rcpp]; }; - weathercan = derive2 { name="weathercan"; version="0.2.7"; sha256="09465l1gy349vgnpasxazp3i5x82hld8k06ba6556k4r9jypx08v"; depends=[dplyr httr lubridate purrr stringi tidyr xml2]; }; + wdman = derive2 { name="wdman"; version="0.2.4"; sha256="00q9qk8qgz7fjbd9j8pxknrw8lk1ardifg8w4agyrk8r4q56b1a0"; depends=[assertthat binman semver subprocess yaml]; }; + weathercan = derive2 { name="weathercan"; version="0.2.8"; sha256="1hspjij4rhlnl3k1hidpa9sclml95q9igwf9dsy0kihlsl0g35h1"; depends=[dplyr httr lubridate purrr rlang stringi tidyr xml2]; }; weathermetrics = derive2 { name="weathermetrics"; version="1.2.2"; sha256="1hjhgsy3v8328hv4czxxz7kp68sxc10sy10f3dv5j8f6pka6qlsp"; depends=[]; }; weatherr = derive2 { name="weatherr"; version="0.1.2"; sha256="11sb5bmqccqkvlabsw4siy9n6ivsrvxavywvaffgrs3blmnygql9"; depends=[ggmap lubridate RJSONIO XML]; }; - webTRISr = derive2 { name="webTRISr"; version="0.1.0"; sha256="19xal5zg9mg25vzvkz55zm6gkd8b0y3sw3zbbrxn73a1jg8x5v0l"; depends=[dplyr httr jsonlite lubridate magrittr purrr readr stringr]; }; + webTRISr = derive2 { name="webTRISr"; version="0.1.1"; sha256="044a079fj4ryykj2n8zlfipmjyrfyfvhrqcd1wbb6r440yjkvali"; depends=[dplyr httr jsonlite lubridate magrittr purrr readr stringr]; }; webchem = derive2 { name="webchem"; version="0.4.0"; sha256="032bsfnkn7s33y42fyf8yradsh8jhms4ryjkh0r76hqnx3j00ph0"; depends=[httr jsonlite RCurl rvest stringr xml2]; }; webdriver = derive2 { name="webdriver"; version="1.0.5"; sha256="0l3nz7gf62jlkvkn5sfxfvn0prxz3ds7nlpfb1yhnmdljhbzrgzf"; depends=[base64enc callr curl debugme httr jsonlite R6 showimage withr]; }; webglobe = derive2 { name="webglobe"; version="1.0.2"; sha256="1277d6fkgrgixlhikfwf0r6z8g5b7mah905xi219qsfycxmifgn9"; depends=[geojsonio httpuv jsonlite]; }; - webmockr = derive2 { name="webmockr"; version="0.2.6"; sha256="00akqj7lw3hvwxllnn48zpq5wk70bbr4ghzilh6064jwkk365c8v"; depends=[crul curl fauxpas jsonlite lazyeval magrittr R6 urltools]; }; + webmockr = derive2 { name="webmockr"; version="0.2.8"; sha256="03744y89d1cklidd5lyqw23yaz71yyv6w8gk5qqibg2alq58gcn8"; depends=[crul curl fauxpas jsonlite lazyeval magrittr R6 urltools]; }; webp = derive2 { name="webp"; version="0.4"; sha256="0jsyjynrsrqpbg93rn48xrjclkvwmz2c2lhcfli5djny122ymh6r"; depends=[]; }; webr = derive2 { name="webr"; version="0.1.0"; sha256="0fjbk933034cgmqd41cw7q5xcvrwgylcic6lxav9jv3b2sspzw06"; depends=[ggplot2 moonBook stringr]; }; webreadr = derive2 { name="webreadr"; version="0.4.0"; sha256="0l3l5g4zj5faxqi1kqwx9lq91gbj40z2q3csrsmpal08qnwkxs90"; depends=[Rcpp readr]; }; - websearchr = derive2 { name="websearchr"; version="0.0.2"; sha256="1yf8ch86khg5syppcxs94mxgc3i5623qyhzh174nssw1wzyqb9ba"; depends=[]; }; - webshot = derive2 { name="webshot"; version="0.5.0"; sha256="07r71zzmggp4jf92x4ws4wg6v1x98vaj01lsar85bnb30n5vx8gh"; depends=[jsonlite magrittr processx withr]; }; - webuse = derive2 { name="webuse"; version="0.1.2"; sha256="0ks3pb9ir778j9x4l0s4ly2xa1jc9syddqm65wkck52q3lrarg3l"; depends=[haven]; }; + websearchr = derive2 { name="websearchr"; version="0.0.3"; sha256="1c6dwm5g5rjq0b12zrwwi5k9760jb0ph83v4j2gm8zm0x9dhiqm9"; depends=[]; }; + webshot = derive2 { name="webshot"; version="0.5.1"; sha256="08sb1xi376pfy1vwilk2d68zljsg9yiv04n2dkqz383gdhh0sxdr"; depends=[callr jsonlite magrittr]; }; + webuse = derive2 { name="webuse"; version="0.1.3"; sha256="09xvw0v991cq1ck2kfxblp5cngfh9j6swvh5xv420mvky0kshv32"; depends=[haven]; }; webutils = derive2 { name="webutils"; version="0.6"; sha256="1basl7q2m8y9nw5ksi1kdz6an9pybvsmdd4snrm7a37041xymnps"; depends=[curl jsonlite]; }; wec = derive2 { name="wec"; version="0.4-1"; sha256="10lqh43536d44d6082rpp11q1323pmjbmgrgb8v9mrk9c1ysf50w"; depends=[dplyr]; }; weco = derive2 { name="weco"; version="1.2"; sha256="1prk8hn782pd8g2rbbaj7y10vjimqs9n8i4rab6aw6fc3k759d6b"; depends=[]; }; weibullness = derive2 { name="weibullness"; version="1.18.6"; sha256="046fs6b5yb6ckddcb9vplc5478c7xprnafsj4rvzb1gmcpcrqqck"; depends=[]; }; + weibulltools = derive2 { name="weibulltools"; version="0.5.4"; sha256="0xxqcvxd489qhdais7f2xnscz8bfcsl4k1qggl35v65bn7bm7hjw"; depends=[dplyr magrittr plotly Rcpp sandwich segmented SPREDA survival]; }; weightTAPSPACK = derive2 { name="weightTAPSPACK"; version="0.1"; sha256="0kpfw477qka5qrc6sh73had38xbrwrqp1yv0dj2qiihkiyrp67ks"; depends=[HotDeckImputation mice plyr survey]; }; weightedScores = derive2 { name="weightedScores"; version="0.9.5.1"; sha256="118hzwaarcb8pk2zz83m6zzzndlpbbzb7gz87vc7zggpa998k1gr"; depends=[mvtnorm rootSolve]; }; weightr = derive2 { name="weightr"; version="1.1.2"; sha256="13wy7ygx7khbmymg2r0rr6mrl4lbapf5bnnq1rq8izl38sjk7csx"; depends=[]; }; - weights = derive2 { name="weights"; version="0.90"; sha256="0wgh2nb2y0xr20y6ig9mric34zhwpndb71ddpbrf5sjqg3hijj96"; depends=[gdata Hmisc mice]; }; + weights = derive2 { name="weights"; version="1.0"; sha256="0186bfpkhxngrshac6bpg37alp6slwhwd43inrm8hqg0vhpfgc4c"; depends=[gdata Hmisc mice]; }; weirs = derive2 { name="weirs"; version="0.25"; sha256="17a0ppi7ghikrwn39zvhg2cvhmnr3w0qi7r9lj22x65ii9nzadd7"; depends=[]; }; welchADF = derive2 { name="welchADF"; version="0.3"; sha256="0k2di5fwh5jv87mw4bjnhbk2rmhf2v2f5ksjr5dgnyhnawwxqq97"; depends=[lme4]; }; wellknown = derive2 { name="wellknown"; version="0.5.0"; sha256="1y3hi5ajqaxx3s40cx24ayfcd3c6d1ydlhsm0gg2fxgmidm6bhwy"; depends=[jsonlite V8]; }; wesanderson = derive2 { name="wesanderson"; version="0.3.6"; sha256="09mr6p2jmqdjq27cz974w5hyxgn929zp9z3inhxqmmh1582fmdi2"; depends=[]; }; - wevid = derive2 { name="wevid"; version="0.4.2"; sha256="0d771r3xrd7nwnpwnhzqaqybimjg0gaikqqagbf483x423ijfdny"; depends=[ggplot2 pROC reshape2 zoo]; }; + wevid = derive2 { name="wevid"; version="0.5.1"; sha256="1dw4ypdmhnvwv89ydjbl2jbaf6913gx966qvcbm82apvjbb624vy"; depends=[ggplot2 pROC reshape2 zoo]; }; wfe = derive2 { name="wfe"; version="1.6"; sha256="0y8f042hzlqwgsr63rl2apl7hkw9bs69a287dynvz9w078am61ch"; depends=[arm MASS Matrix]; }; wfg = derive2 { name="wfg"; version="0.1"; sha256="1r6wb8v42mpapjfhmkmghm9fq21c3s4zmdxy8nlh31nsja71c37d"; depends=[igraph]; }; wfindr = derive2 { name="wfindr"; version="0.1.0"; sha256="0m5xj50hqdjj4lpbgx1kp3my4njr0nz09hd63rf4qf1ls8r7zil9"; depends=[dplyr magrittr]; }; @@ -12546,8 +13104,9 @@ in with self; { wheatmap = derive2 { name="wheatmap"; version="0.1.0"; sha256="1c1xvzy194vw3idkwkqp9kyrfldzczj30cl15jw1bbnw87zcwdzy"; depends=[colorspace RColorBrewer]; }; whereport = derive2 { name="whereport"; version="0.1"; sha256="1gdqzr2hrnpxbwl7cfps4m3xja8wkgwfs50i2nailybympvdnxm4"; depends=[dplyr]; }; whisker = derive2 { name="whisker"; version="0.3-2"; sha256="0z4cn115gxcl086d6bnqr8afi67b6a7xqg6ivmk3l4ng1x8kcj28"; depends=[]; }; - whitening = derive2 { name="whitening"; version="1.0.0"; sha256="0vncjbrw9gafplz6r02x0j1fnrfvxq027h1pqcbdwqykjzg0zcym"; depends=[corpcor]; }; - whoami = derive2 { name="whoami"; version="1.1.2"; sha256="1wkgh8mxm2ci5ylwppbh38sx5fm5rsm06bimdpc07z35bz4825xg"; depends=[httr jsonlite]; }; + whitechapelR = derive2 { name="whitechapelR"; version="0.3.0"; sha256="0mnq5m59mw8w5g1p0h2xzlz738j397b3444km59bm5yln3j0nsbi"; depends=[igraph plyr]; }; + whitening = derive2 { name="whitening"; version="1.1.0"; sha256="19p0l2vim9nc1m381v9m3icg238n1xamvwz3v2v00sb1fan9nr9s"; depends=[corpcor]; }; + whoami = derive2 { name="whoami"; version="1.2.0"; sha256="1b1zvbvmyh979fq72qa5k83888wpfr44l0qjz0pgdlad1li0nfnc"; depends=[httr jsonlite]; }; whoapi = derive2 { name="whoapi"; version="0.1.2"; sha256="0ib0an08xsxan24q8mb5ai375njmkdc61lh4321rzgr25iqvi682"; depends=[httr]; }; wicket = derive2 { name="wicket"; version="0.4.0"; sha256="1lizzmj69bswzlk18fv2v4yxxc6dynvmkymdiafznzcyyz4a8xnf"; depends=[BH Rcpp]; }; widals = derive2 { name="widals"; version="0.5.4"; sha256="1bl59s1r4gkvq4nkf94fk7m0zvhbrszkgmig66lfxhyvk9r84fvb"; depends=[snowfall]; }; @@ -12557,10 +13116,12 @@ in with self; { wikibooks = derive2 { name="wikibooks"; version="0.2"; sha256="178lhri1b8if2j7y7l9kqgyvmkn4z0bxp5l4dmm97x3pav98c7ks"; depends=[]; }; wikilake = derive2 { name="wikilake"; version="0.4"; sha256="0pm0brzkf2k6aknwl4b3fba5ly7mhah8qfb0h94fckiaqbnpyx9v"; depends=[maps rvest selectr sp stringi stringr units WikipediR xml2]; }; wikipediatrend = derive2 { name="wikipediatrend"; version="1.1.14"; sha256="00i38py9n4l0iqkn3257a3jbiwh3hrmx1p9x6rfh9sgfcch8yyj5"; depends=[hellno httr jsonlite RColorBrewer rvest stringr xml2]; }; - wikitaxa = derive2 { name="wikitaxa"; version="0.2.0"; sha256="06ccb1ix5lsz3jgr3aq2ywq9bdnz020sa5dzlq1ayw95gdqj6icl"; depends=[crul curl data_table jsonlite tibble WikidataR xml2]; }; + wikisourcer = derive2 { name="wikisourcer"; version="0.1.1"; sha256="03n813w281y6zk0xl248jdis6jr10dgpax7lcmx8av18dipssf1d"; depends=[dplyr purrr rvest stringr urltools xml2]; }; + wikitaxa = derive2 { name="wikitaxa"; version="0.3.0"; sha256="0v681qac33dlcdlah20qf5qb9g5h917rpzv67brx1handjnapnqh"; depends=[crul curl data_table jsonlite tibble WikidataR xml2]; }; wildcard = derive2 { name="wildcard"; version="1.1.0"; sha256="0qkzab84z95g5f4fv3v4wisccgd7k9m3210pz4nvm1x8rfaqfjf1"; depends=[magrittr stringi]; }; wildlifeDI = derive2 { name="wildlifeDI"; version="0.2"; sha256="0z8zyrl3d73x2j32l6xqz5nwhygzy7c9sjfp6bql5acyfvn7ngjv"; depends=[adehabitatLT rgeos sp]; }; wildpoker = derive2 { name="wildpoker"; version="1.1"; sha256="1302ain55spz34irmq49sp9b1pvrn2nxmzmqs8m9wdk6g82h3s27"; depends=[]; }; + wilson = derive2 { name="wilson"; version="2.0.2"; sha256="0ivd3cm6swhbcg38f66505rwf8h19wcg69mf3p4f9vjif8l13q4s"; depends=[circlize colourpicker ComplexHeatmap data_table DESeq2 DT factoextra FactoMineR ggplot2 ggrepel gplots heatmaply log4r openssl plotly plyr R6 RColorBrewer reshape rintrojs rje rjson RJSONIO scales shiny shinycssloaders shinydashboard shinyjs viridis]; }; winRatioAnalysis = derive2 { name="winRatioAnalysis"; version="0.1.0"; sha256="1msvc06bfzw9clinxbvr5fdw38dff0c0xii46182nwnk5kj0libr"; depends=[data_table JM Matrix MLEcens mvtnorm nlme plyr pssm survival]; }; windex = derive2 { name="windex"; version="1.0"; sha256="0ci10x6mm5i03j05fyadxa0ic0ngpyp5nsn05p9m7v1is5jhxci0"; depends=[ape geiger scatterplot3d]; }; windfarmGA = derive2 { name="windfarmGA"; version="1.2.1"; sha256="1v4brwi92a2kchak43z0vxjq11373amh190fnmpmnpz58zbls448"; depends=[calibrate data_table doParallel dplyr foreach geoR ggplot2 googleVis gstat gtools leaflet magrittr maptools RandomFields raster RColorBrewer rgdal rgeos rgl RgoogleMaps sp spatstat]; }; @@ -12576,22 +13137,22 @@ in with self; { wnl = derive2 { name="wnl"; version="0.4.1"; sha256="0gr0jf549nmavlzra6b1jg9306chl2l5qivizn5xkkcf8hmq5rm6"; depends=[numDeriv]; }; wnominate = derive2 { name="wnominate"; version="1.2.5"; sha256="0pvw36jzx90z7ah4f7cyf95csdn5x7n9rh3ddsppa61y1dmjsn5k"; depends=[pscl]; }; woe = derive2 { name="woe"; version="0.2"; sha256="15mvcmwnrqxpzn054lq85vyzq5rgxkiwbd40gnn4s3ny1xdrwgsm"; depends=[]; }; - woeBinning = derive2 { name="woeBinning"; version="0.1.5"; sha256="04pw32vng31v1n4r1g1fisvv8cacxmcx7m65vw4a2byamp2d25yq"; depends=[]; }; + woeBinning = derive2 { name="woeBinning"; version="0.1.6"; sha256="0x890h5fh59n54587adyzphr956fkg3px8i7c378aq1fs7k35gxs"; depends=[]; }; woeR = derive2 { name="woeR"; version="0.1.3"; sha256="15bdhgjq39svzaqzmfykyaq4r543lq15jf0sz8m9bwjv2c6vlx5l"; depends=[dplyr]; }; womblR = derive2 { name="womblR"; version="1.0.3"; sha256="0g8r98lfycvsaii3zczr55pah5ffqrpinbrax41yp62w6hzgkq9b"; depends=[msm mvtnorm Rcpp RcppArmadillo]; }; - wooldridge = derive2 { name="wooldridge"; version="1.3.0"; sha256="029vdiglwkr7ilr7jvzarvphcc71n1majn6bh427b4qq7n01a7wb"; depends=[]; }; + wooldridge = derive2 { name="wooldridge"; version="1.3.1"; sha256="0471x3vszf1c4fj9pk5ix8bdmp2bnq1ghnqvwzad9chvvkpzmg3l"; depends=[]; }; word_alignment = derive2 { name="word.alignment"; version="1.0.9"; sha256="02dy4a9agfb99rjbqxy35nf11bpxyjcq15bnyzjkbvcy0ppfgz0l"; depends=[data_table openxlsx quanteda]; }; wordbankr = derive2 { name="wordbankr"; version="0.3.0"; sha256="0aa1gz3fg7h9wnk93ialwj0wjyk8wxani8galwkrms4fp7d5lmf4"; depends=[assertthat DBI dbplyr dplyr purrr rlang RMySQL robustbase stringr tidyr]; }; - wordcloud = derive2 { name="wordcloud"; version="2.5"; sha256="1ajqdkm8h1wid3d41zd8v7xzf2swid998w31zrghd45a5lcp7qcm"; depends=[RColorBrewer Rcpp slam]; }; + wordcloud = derive2 { name="wordcloud"; version="2.6"; sha256="0j96yyvm6bcrrpbdx4w26piqx44a0vbsr3px9cb4zk8a8da6jwak"; depends=[RColorBrewer Rcpp]; }; wordcloud2 = derive2 { name="wordcloud2"; version="0.2.1"; sha256="1a2q42bn65q4idxq0vxysyam16q6c18inxv4dqhfy0x52j8z9x6k"; depends=[base64enc htmlwidgets]; }; wordmatch = derive2 { name="wordmatch"; version="1.0"; sha256="0zscp361qf79y1zsliga18hc7wj36cnydshrqb9pv67b65njrznz"; depends=[plyr reshape2]; }; wordnet = derive2 { name="wordnet"; version="0.1-14"; sha256="12a21zlc7h973gi1632gngbk8b09vhp3sldh1mh9b5n6h18ga25p"; depends=[rJava]; }; wordspace = derive2 { name="wordspace"; version="0.2-0"; sha256="0rrnbimf68ax1qxsyn7g0kd76abijzxg5i11h93l0fnzi2g2a9xn"; depends=[cluster iotools MASS Matrix Rcpp sparsesvd]; }; - workflowr = derive2 { name="workflowr"; version="1.1.0"; sha256="0vpnrldn798g3hcf1i30l5306259idbn5h3s23hjx3vxqjznss7f"; depends=[callr getPass git2r glue knitr R_utils rmarkdown rprojroot rstudioapi stringr whisker yaml]; }; + workflowr = derive2 { name="workflowr"; version="1.1.1"; sha256="0qkppim5b6kb5jf0xmgaqpzhyxdcg5qfbmy3vafi5w4yw08q23q2"; depends=[callr getPass git2r glue knitr R_utils rmarkdown rprojroot rstudioapi stringr whisker yaml]; }; worldmet = derive2 { name="worldmet"; version="0.8.4"; sha256="15crnmlcj1yi9rm35n8f34jprms24r2xwx550zz627bdvq4vmam4"; depends=[doParallel dplyr foreach leaflet openair readr zoo]; }; worms = derive2 { name="worms"; version="0.2.2"; sha256="183chjdi5qvsmdznvc9igcxaz769a37rwh5nzgvf5zf012a85wir"; depends=[httr plyr]; }; worrms = derive2 { name="worrms"; version="0.2.8"; sha256="1f25x46b7hzrjz6y8ps29cfl8qa17smxbnrghf3bwhr4qc0vf5k5"; depends=[crul data_table jsonlite tibble]; }; - wosr = derive2 { name="wosr"; version="0.1.1"; sha256="1jmq4z5myjxww2lz20i70vyvsvjxm1n9ayvxggxvzl28kwhpi5ca"; depends=[httr jsonlite pbapply xml2]; }; + wosr = derive2 { name="wosr"; version="0.2.0"; sha256="0q8mswxb3w4d9pgc2fi64142i3dad4f2999vr1jvc9n8sjrmmmfc"; depends=[httr jsonlite pbapply xml2]; }; wpp2008 = derive2 { name="wpp2008"; version="1.0-1"; sha256="0gd3vjw1fpzhp3qlf1jpc24f76i0pxsjs5pb1v3k2si6df7q4msd"; depends=[]; }; wpp2010 = derive2 { name="wpp2010"; version="1.2-0"; sha256="1h87r1cn4lnx80dprvawsyzfkriscqjgr27gvv7n19wvsx8qd57k"; depends=[]; }; wpp2012 = derive2 { name="wpp2012"; version="2.2-1"; sha256="00283s4r36zzwn67fydrl7ldg6jhn14qkf47h0ifmsky95bd1n5k"; depends=[]; }; @@ -12601,8 +13162,8 @@ in with self; { wql = derive2 { name="wql"; version="0.4.9"; sha256="0m16l807mhcjkbqhlzhc24pw4hl78fjyykiszlg337x3qs803fg2"; depends=[ggplot2 reshape2 zoo]; }; wqs = derive2 { name="wqs"; version="0.0.1"; sha256="14qaa9g9v4nqrv897laflib3wwhflyfaf9wpllmbi5xfv9223rcg"; depends=[glm2 Rsolnp]; }; wrangle = derive2 { name="wrangle"; version="0.4"; sha256="0d1xdcvgcv8bn20s90sn1dmzhcdz39yr1m2bkcjbvavm132p96bl"; depends=[dplyr lazyeval magrittr tidyr]; }; - wrapr = derive2 { name="wrapr"; version="1.5.0"; sha256="1r3h4h9vd0j4pbxh72557vqhdm1b79d35ialxr5919afx0nw1sg8"; depends=[]; }; - wrassp = derive2 { name="wrassp"; version="0.1.7"; sha256="0wbgrpxp4ck8cpfnv6n5lf04ga12gn8cm3rm5jj32gcm4gvdvzjl"; depends=[]; }; + wrapr = derive2 { name="wrapr"; version="1.6.3"; sha256="0qvlyj3wnvy6wxdnkb49c7a16v14xkk5zb9bw27w06p9iikc66i0"; depends=[]; }; + wrassp = derive2 { name="wrassp"; version="0.1.8"; sha256="052x0lxpchr6f97yfj3vmhh8gc8qg5pp1m91h5akrav4yfawbs7k"; depends=[]; }; write_snns = derive2 { name="write.snns"; version="0.0-4.2"; sha256="0sxg7z8rnh4lssbivkrfxldv4ivy37wkndzzndpbvq2gbvbjnp4l"; depends=[]; }; writexl = derive2 { name="writexl"; version="1.0"; sha256="0r2v12dc4zqmr1agp6vbw0fc48i278018684x84psjjqfmnv14cf"; depends=[]; }; wrspathrow = derive2 { name="wrspathrow"; version="0.1"; sha256="1xkh12aal85qhk8d0pdj2qbi6pp4jnr6zbxkhdw2zwav57ly3f4i"; depends=[raster rgdal rgeos sp wrspathrowData]; }; @@ -12613,7 +13174,7 @@ in with self; { wskm = derive2 { name="wskm"; version="1.4.28"; sha256="0d9hcriakg6fxzc8wjsahc4zkyjza31mb9dv2h4xcf8298xa96i4"; depends=[clv lattice latticeExtra]; }; wsrf = derive2 { name="wsrf"; version="1.7.17"; sha256="0gmlvfcy2iqa5sqhwps3hx0hl9fir8nf5xq62f25sn8i3llw752z"; depends=[Rcpp]; }; wtest = derive2 { name="wtest"; version="3.1"; sha256="1rlas9jn57mcyjic9dhkqj355djldc95q07b076w847cd4pmzqvb"; depends=[]; }; - wtss = derive2 { name="wtss"; version="1.0.0"; sha256="041686mnhqcljxm3ska35mslpq30ah47anvnmrgnkx5y05pwa8pj"; depends=[jsonlite lubridate RCurl roxygen2 zoo]; }; + wtss = derive2 { name="wtss"; version="1.1.0"; sha256="019zvmq4z5xy5dwcf4g0z43x2mb14d1lgqhs1zp6821izffpbd0s"; depends=[jsonlite lubridate RCurl roxygen2 zoo]; }; wunderscraper = derive2 { name="wunderscraper"; version="0.1.0"; sha256="1h9nhxvs673n2ivw466qm77k20541cwgmmq35iv3dcb3hvw36p0r"; depends=[httr jsonlite sf tigris]; }; wux = derive2 { name="wux"; version="2.2-1"; sha256="0iw0kf0wfspnpc83v7gxhcakmp0z34cccnm0jn9c2za9ay9l2swv"; depends=[abind class corpcor fields gdata Hmisc ncdf4 reshape rgdal rgeos rworldmap sp stringr]; }; wvtool = derive2 { name="wvtool"; version="1.0"; sha256="0x9awj6g5lzqp2lhwgh9ib7jmfdzyhwazrjvw1vwacqqfhbz8qxv"; depends=[]; }; @@ -12623,20 +13184,23 @@ in with self; { x13binary = derive2 { name="x13binary"; version="1.1.39-1"; sha256="1v6slh5136av3l7bk99a57gj6i6khx2j55qv4pyz1zmrzzgaayyc"; depends=[]; }; x3ptools = derive2 { name="x3ptools"; version="0.0.1"; sha256="16kms5hbpa5hz5i0pdwx49yp2hmhyr8hd4w672vmwi94s5d84i1q"; depends=[digest rgl xml2 zoo]; }; xLLiM = derive2 { name="xLLiM"; version="2.1"; sha256="1q6ryw9z5wi0amv5f4drz14p36zy8gc2a0s59q10jixhhyas7ycl"; depends=[abind capushe corpcor igraph MASS Matrix]; }; - xROI = derive2 { name="xROI"; version="0.1.2"; sha256="01xicw6ffrzs0df69dmylfxxfszqy5j81vba1w1l99h7hxq5a6bs"; depends=[colourpicker data_table jpeg lubridate moments plotly raster RCurl rgdal rjson shiny shinyAce shinyBS shinydashboard shinyFiles shinyjs shinythemes shinyTime sp stringr tiff]; }; - xSub = derive2 { name="xSub"; version="0.0.1"; sha256="0ccvkdylsia8qkfjlbbyggpy4l8z3r05cmvp4xb3j4628fa82jav"; depends=[countrycode haven RCurl]; }; + xROI = derive2 { name="xROI"; version="0.9.9"; sha256="10wr1298066mncycmcbgqrpbd3fnd36f8ydrq11mjg0gxcs8m3i8"; depends=[colourpicker data_table jpeg lubridate moments plotly raster RCurl rgdal rjson shiny shinyAce shinyBS shinydashboard shinyFiles shinyjs shinythemes shinyTime sp stringr tiff]; }; + xRing = derive2 { name="xRing"; version="0.1.0"; sha256="17f1jif8yw2508k86p8mjgw1h20ml5wzaff04ix9xq96plqzi8ma"; depends=[dplR imager tcltk2 tkRplotR]; }; + xSub = derive2 { name="xSub"; version="2.0.1"; sha256="0pharrgncczdq06f6cspv4is595jrbc0zik0jcps2619khs7b1q8"; depends=[countrycode haven RCurl]; }; xVA = derive2 { name="xVA"; version="0.8.1"; sha256="0wr4i37sya5gg6v63ka16g9077gxbhvjqyqfaahhban8skzl2adf"; depends=[SACCR Trading]; }; - xaringan = derive2 { name="xaringan"; version="0.6"; sha256="0jgdixgbkwp9jnvjnrzdmlawz8f24z8in56cma3hn79glbvxfaw4"; depends=[htmltools knitr rmarkdown servr xfun]; }; + xaringan = derive2 { name="xaringan"; version="0.8"; sha256="05a2x3a8irvj34zvpbnivwi73i2i6hsh63rw56lj0b4y8d8cqgby"; depends=[htmltools knitr rmarkdown servr xfun]; }; xbreed = derive2 { name="xbreed"; version="1.0.1"; sha256="0grrfra9j0k3mqikmrif5qawh4260ayr40irskzpp9ywsixim63h"; depends=[BGLR]; }; - xergm = derive2 { name="xergm"; version="1.8.2"; sha256="0rg8b0r27nzjnf0zkwfbkw96439h0b40k1l5lqi5igyr0bm7w0cc"; depends=[btergm GERGM rem tnam xergm_common]; }; + xdcclarge = derive2 { name="xdcclarge"; version="0.1.0"; sha256="1j8wsidwmfjygqlwavxinv4bqc6rddy42jdmlknsjfrrs49yj8kn"; depends=[nlshrink Rcpp RcppArmadillo]; }; + xergm = derive2 { name="xergm"; version="1.8.3"; sha256="155469550rsdwszrhw7vdgwz2h0d72a8f4hirrb6hny7f1q63ykk"; depends=[btergm GERGM rem tnam xergm_common]; }; xergm_common = derive2 { name="xergm.common"; version="1.7.7"; sha256="0nfls8a1knmnjjrrw0q93qsfrrb9p3yqsm5dxp13z0780vrzxvcj"; depends=[ergm network]; }; xesreadR = derive2 { name="xesreadR"; version="0.2.2"; sha256="1y7iilqdj9jv5snzylihs996hvpcj9s3yaiy7wr20m5yh1ngwkvj"; depends=[bupaR data_table dplyr lubridate purrr stringr tidyr XML xml2]; }; - xfun = derive2 { name="xfun"; version="0.2"; sha256="0zl22fcw90kdvzkjyf6vbmdmn9rz3bl51522fasvmykypffyng4a"; depends=[]; }; + xfun = derive2 { name="xfun"; version="0.4"; sha256="0991ywgc2dsraba91kkj37akhfzhzn02cnz7c88hhdis9kag3pwv"; depends=[]; }; xgboost = derive2 { name="xgboost"; version="0.71.2"; sha256="134q69xbi93ajjlwrp838jgypjdjipmbkzmr31mvc100i9nsr14x"; depends=[data_table magrittr Matrix stringi]; }; xgobi = derive2 { name="xgobi"; version="1.2-15"; sha256="03ym5mm16rb1bdwrymr393r3xgprp0ign45ryym3g0x2zi8dy557"; depends=[]; }; xhmmScripts = derive2 { name="xhmmScripts"; version="1.1"; sha256="1qryyb34jx9c64l8bnwp40b08y81agdj5w0icj8dk052x50ip1hl"; depends=[gplots plotrix]; }; - xkcd = derive2 { name="xkcd"; version="0.0.5"; sha256="1cq4n7w4adj24qq658z15jkqvrn4pd5abxpcsdkzb2cq98m69iis"; depends=[extrafont ggplot2 Hmisc]; }; + xkcd = derive2 { name="xkcd"; version="0.0.6"; sha256="1z2y0ihn68ppay7xkglhw7djki5654g6z4bbpyy41if57z9q554f"; depends=[extrafont ggplot2 Hmisc]; }; xkcdcolors = derive2 { name="xkcdcolors"; version="1.0"; sha256="07fnjv01r3b951dqca2zs9b9f6hsgbpbpsrggvb8rps53kpid0i7"; depends=[FNN]; }; + xlm = derive2 { name="xlm"; version="0.1.1"; sha256="0hr95x3s3gbyj12xb8kvy2kzlmjr2ycdw79r2kfcqvvabd2h41dv"; depends=[data_table httr R6 RJSONIO]; }; xlsimple = derive2 { name="xlsimple"; version="0.0.1"; sha256="1x0b2pb1sg2sqmh4z03bchsc9fhcphi6mxk4nbb6my2cr0kqrrdq"; depends=[]; }; xlsx = derive2 { name="xlsx"; version="0.6.1"; sha256="1d58qlzdj4vrk4vnlyzri600ix7z3wnc30gnbcc1qz27nlbbv055"; depends=[rJava xlsxjars]; }; xlsxjars = derive2 { name="xlsxjars"; version="0.6.1"; sha256="1rka5smm7yqnhhlblpihhciydfap4i6kjaa4a7isdg7qjmzm3h9p"; depends=[rJava]; }; @@ -12644,32 +13208,33 @@ in with self; { xlutils3 = derive2 { name="xlutils3"; version="0.1.0"; sha256="1cxishi62bd36zlsy5qhzix1p68akdf9kpjg9gfm9aqpcijzccb9"; depends=[magrittr readxl]; }; xmeta = derive2 { name="xmeta"; version="1.1-4"; sha256="1y9jldi8qn4jpr05g8fnvb23gig180hh36pc2v4y8n8289s9yvg2"; depends=[aod glmmML metafor mvmeta numDeriv]; }; xml2 = derive2 { name="xml2"; version="1.2.0"; sha256="154lmksfiwkhnlmryas25mjhfg6k4mmnnk7bbb29mnn5x5pr2yha"; depends=[Rcpp]; }; - xmlparsedata = derive2 { name="xmlparsedata"; version="1.0.1"; sha256="0q9d4l3p4ypc0qswnjwrd3as9bx9f1niixsc19y1msva51sg5h39"; depends=[]; }; - xmlrpc2 = derive2 { name="xmlrpc2"; version="1.0"; sha256="1h99z0kmmp5rmyglqwpaan6hbb8kg8q4783kjsyww43fl0l3imd8"; depends=[base64enc curl xml2]; }; - xmrr = derive2 { name="xmrr"; version="1.0.1"; sha256="0h5861mym7k7xkby6zilcxq8i3yr06kcaam5pzi2y0q85iycb88f"; depends=[dplyr ggplot2 tidyr]; }; + xmlparsedata = derive2 { name="xmlparsedata"; version="1.0.2"; sha256="1npf4ng9d34k56ib1ac4cb3p2x8gqm3jha1sc25nv6546ahcrcjh"; depends=[]; }; + xmlrpc2 = derive2 { name="xmlrpc2"; version="1.1"; sha256="13rfw0civp3hzi4hn31x1idliid1qb73495x4c31z5msd35lzxrs"; depends=[base64enc curl xml2]; }; + xmrr = derive2 { name="xmrr"; version="1.0.36"; sha256="0xxi8z9sp156508y5a7f4ax8yry7lg4qmn0hyk04dn1xr7syd4gs"; depends=[dplyr ggplot2 tidyr]; }; xoi = derive2 { name="xoi"; version="0.67-4"; sha256="180zzc81d883qzl1xgj88d9aslqmsgdvv8w1mx2613h1rkirkpdp"; depends=[qtl]; }; + xopen = derive2 { name="xopen"; version="1.0.0"; sha256="1vrvgdika1d63dwygynbv2wmd87ll8dji5dy89hj576n8hw601z2"; depends=[processx]; }; xplain = derive2 { name="xplain"; version="0.2.1"; sha256="01hl9dxiqqxzdixqccga0sywlhv97pi1l51r9sr7v106s7q11jxn"; depends=[RCurl readr XML]; }; - xpose = derive2 { name="xpose"; version="0.4.2"; sha256="11k07z76fpp4fvp3kfx1jc7bx1mwc1xfwyp46xwfhgfbazbvyfd7"; depends=[dplyr ggforce ggplot2 purrr readr rlang stringr tibble tidyr vpc]; }; + xpose = derive2 { name="xpose"; version="0.4.3"; sha256="1h1wx0pyr2l93pc59ybgg124fs1qhwhhyarafmh4s9b0ps0a451c"; depends=[dplyr ggforce ggplot2 purrr readr rlang stringr tibble tidyr vpc]; }; xpose4 = derive2 { name="xpose4"; version="4.6.1"; sha256="1722ai8r94dmy4d2r728iir0hl2b2gmym8xjsqscfc6jw070734i"; depends=[dplyr gam Hmisc lattice lazyeval readr survival]; }; xptr = derive2 { name="xptr"; version="1.1"; sha256="12yvgbwm311hap3kk24wdx5zz084h0lhkj9k10mjzqp4a6aayi88"; depends=[]; }; xray = derive2 { name="xray"; version="0.2"; sha256="1ibj92ljlj8a5rmbrci691yhpd4kwrfyl944nzl2dcbf58l01dzq"; depends=[dplyr foreach ggplot2 lubridate scales]; }; xseq = derive2 { name="xseq"; version="0.2.1"; sha256="0bsakbfvkfv39q2ch2g21b17g84470sq4v73355cljlshsi6404i"; depends=[e1071 gptk impute preprocessCore RColorBrewer sfsmisc]; }; xslt = derive2 { name="xslt"; version="1.3"; sha256="0giqzmdby9ax8gwx9b7xqka28k3hgymv4289k8p8dvg26d683p3l"; depends=[Rcpp xml2]; }; xsp = derive2 { name="xsp"; version="0.1.2"; sha256="1jbmxa234v52qji8sz4bkg24c2n65b0zh9py1wyyfzw9n1wx5w0r"; depends=[ggplot2 reshape2]; }; - xtable = derive2 { name="xtable"; version="1.8-2"; sha256="0398qkpvlw3dv0myz4mjcyqwpwc2m31l127r8vdzwc71wb6s28qn"; depends=[]; }; + xtable = derive2 { name="xtable"; version="1.8-3"; sha256="09f311gq9g7dzf8jdvcx72j11xb7p00jlg066jjbpa6pz3zv1cjk"; depends=[]; }; xtal = derive2 { name="xtal"; version="1.15"; sha256="1zq3vd5x3vw6acn47yd2x7kflr9sm3znmdkm68cs64ha54jbl3vs"; depends=[]; }; - xtensor = derive2 { name="xtensor"; version="0.6.1-0"; sha256="0ajxzjj8nyn7a0z16agj499j6qwj0ykag152pvmqvdm000dx5n1l"; depends=[Rcpp]; }; + xtensor = derive2 { name="xtensor"; version="0.8.1-0"; sha256="0qyqadg2yvvf51ch2w1aqsi1j0yfgw1167fps4s0k7gjvv692zfx"; depends=[Rcpp]; }; xtermStyle = derive2 { name="xtermStyle"; version="3.0.5"; sha256="1q4qq8w4sgxbbb1x0i4k5xndvwisvjszg830wspwb37wigxz8xvz"; depends=[]; }; xtractomatic = derive2 { name="xtractomatic"; version="3.4.2"; sha256="1w70kk608avnf7zdjx79gxqmj12cw86ma4x0b9j92md1vmpw5389"; depends=[dplyr httr ncdf4 readr sp]; }; - xts = derive2 { name="xts"; version="0.10-2"; sha256="1i11fczks4lh8rpi6xbm9bm7f3jpcp6xw03kv178g3n3361qhmc1"; depends=[zoo]; }; - xwf = derive2 { name="xwf"; version="0.2-1"; sha256="1g94wbsq8flnkxxfxx6yg87siiwpyrx219an9a2cf1blnwjv9b68"; depends=[mgcv]; }; - xxIRT = derive2 { name="xxIRT"; version="2.1.0"; sha256="17cyvbywfvbs93ky8qmzh6fp94dk24p3wpzb76lxb8nfsvakq5pf"; depends=[ggplot2 lpSolveAPI reshape2]; }; + xts = derive2 { name="xts"; version="0.11-1"; sha256="17d3g14xkxa1a5z5gd3gk1xjqfkjg1ik3i12q0arina8frql3jhd"; depends=[zoo]; }; + xwf = derive2 { name="xwf"; version="0.2-2"; sha256="1psryam65pg7flfa20smm6lx184f76dhjv1lig8sy7y9hphfv3s1"; depends=[mgcv]; }; + xxIRT = derive2 { name="xxIRT"; version="2.1.1"; sha256="1y21yc840kq98sy06qcnlnzizv5aya5yllx4mjx9njv7mvcsp1wr"; depends=[ggplot2 glpkAPI lpSolveAPI reshape2]; }; xyloplot = derive2 { name="xyloplot"; version="1.6"; sha256="0d1dv3syfjwcp9fil9bl1my19d0kdyz1qrp1yf7ykrk8aq91762v"; depends=[]; }; xyz = derive2 { name="xyz"; version="0.2"; sha256="13w4sb4pvgciwr8wsz785dafj2k2kpx7znz46r5d32wx88vkycp4"; depends=[Rcpp]; }; - yaImpute = derive2 { name="yaImpute"; version="1.0-29"; sha256="1zxl4l54y9f9lmi17hlhsbsc4f1qb0dnnl5dg9frhq6bhw2lqxqb"; depends=[]; }; - yacca = derive2 { name="yacca"; version="1.1"; sha256="0wg2wgvh1najmccmgzyigj11mshrdb8w4r2pqq360dracpn0ak6x"; depends=[]; }; + yaImpute = derive2 { name="yaImpute"; version="1.0-30"; sha256="0s997gb9ig2if6nc4g89vi1yz6my3z9m7ai3bgjqw836643dmhg9"; depends=[]; }; + yacca = derive2 { name="yacca"; version="1.1.1"; sha256="1hxgkyxipk27p74vdkiy8a3wjymhcsc6ad3y9mf15qsl2xim6wwl"; depends=[]; }; yakmoR = derive2 { name="yakmoR"; version="0.1.1"; sha256="09aklz79s0911p2wnpd7gc6vrbr9lmiskhkahsc63pdigggmq9f7"; depends=[BBmisc checkmate Rcpp]; }; - yaml = derive2 { name="yaml"; version="2.1.19"; sha256="04bzrnfgbpk0rhkvzwp3k3ip7jpq26bjxz71bx5mwxmcjdb07nz5"; depends=[]; }; + yaml = derive2 { name="yaml"; version="2.2.0"; sha256="0in562nd0i23cg91a8kdbqgim656fgscykwi0icsnq53xj3srg2m"; depends=[]; }; yardstick = derive2 { name="yardstick"; version="0.0.1"; sha256="165czwi62nrhhci06fb0rfpk2gki94aiyl4wlflmgpzmspmgz7m8"; depends=[broom dplyr MLmetrics pROC rlang tibble tidyr tidyselect]; }; yarrr = derive2 { name="yarrr"; version="0.1.5"; sha256="1258bj7x4icaxfabnnd3fgwydnqbzxkih7zw0sdlwdax3q8fw5c5"; depends=[BayesFactor circlize jpeg]; }; yasp = derive2 { name="yasp"; version="0.2.0"; sha256="0fza8h9y1wmarsmjcvw4r970d6j4ii795pd2h4xh9nlsirv50adi"; depends=[]; }; @@ -12683,7 +13248,7 @@ in with self; { yuima = derive2 { name="yuima"; version="1.8.1"; sha256="1jzk3623c1cpw9j8d9b96x6n0jwz8h2izzhrdp01cwwskbnv3hq2"; depends=[boot cubature expm mvtnorm Rcpp RcppArmadillo zoo]; }; yuimaGUI = derive2 { name="yuimaGUI"; version="1.2.0"; sha256="166hsq1nc0jzkqbz08y3dl0qdi58swascbkm1lc7zhsh6g93azjs"; depends=[DT ggplot2 plotly quantmod sde shiny shinyBS shinydashboard shinyjs yuima]; }; yummlyr = derive2 { name="yummlyr"; version="0.1.1"; sha256="0xrk6g58laksz92d8mxck923sk4j92g55szrkxk123wjp5kg9vx6"; depends=[httr jsonlite]; }; - zCompositions = derive2 { name="zCompositions"; version="1.1.1"; sha256="1j6v7mfxhn67mr3q6cvcjj9pqc8a02w114z8q74h3l6jw8ahjg6m"; depends=[MASS NADA truncnorm]; }; + zCompositions = derive2 { name="zCompositions"; version="1.1.1-1"; sha256="147layq5hj7hba2a5q9sb7dwv6rwha9d8040p1npmdif3nbap2zd"; depends=[MASS NADA truncnorm]; }; zFactor = derive2 { name="zFactor"; version="0.1.7"; sha256="0vsjafg65qydfz0j75rrw40si5v2hwbf09z6d58wzffrwzgrwpvd"; depends=[data_table dplyr ggplot2 rootSolve tibble tidyr]; }; zTree = derive2 { name="zTree"; version="1.0.4"; sha256="058vjvxn1lw07nxw8rs1b8vnw6ccxh3swrmvjicvr35xmakj8qa0"; depends=[plyr]; }; zeallot = derive2 { name="zeallot"; version="0.1.0"; sha256="1sd1igcfnv27pa3bqxlbyxchi562h7grnjg1l7wxx3bwr49i57s3"; depends=[]; }; @@ -12692,6 +13257,7 @@ in with self; { zeligverse = derive2 { name="zeligverse"; version="0.1.1"; sha256="1hf3hbgzdlhhyy2gvg984dwp8d0qm0ziyn8i9h5x00gwf74vn9dr"; depends=[Amelia dplyr MatchIt purrr rstudioapi tibble WhatIf Zelig ZeligChoice ZeligEI]; }; zendeskR = derive2 { name="zendeskR"; version="0.4"; sha256="06cjwk08w3x6dx717123psinid5bx6c563jnfn890373jw6xnfrk"; depends=[RCurl rjson]; }; zenplots = derive2 { name="zenplots"; version="0.0-3"; sha256="1ba9xv522knzbirl6ac5hzbmsw8ignsmymbkps2w057w0fsc9iyz"; depends=[graph MASS PairViz]; }; + zeroEQpart = derive2 { name="zeroEQpart"; version="0.1.0"; sha256="1n24nqyl0irpyspwx4b73xy228a84aa8zsn9fcf2lrlni5vyzmm0"; depends=[MASS ppcor]; }; zetadiv = derive2 { name="zetadiv"; version="1.1.1"; sha256="0laxp2pd5s0s9wcnvs1r4shid2gi8ap4y9py6gpl207ywq6cxmgz"; depends=[car glm2 Imap mgcv nnls scam vegan]; }; zfa = derive2 { name="zfa"; version="1.0"; sha256="0lddwpifkzggzvy56ans5pfknfr8laxcg264f3ph2z150gw1plsh"; depends=[SKAT]; }; zic = derive2 { name="zic"; version="0.9.1"; sha256="1vd64ljigf6iwgzlgdxgj65nlwir176h7ddznddpaz2abh6n6zwp"; depends=[coda Rcpp RcppArmadillo]; }; @@ -12703,16 +13269,16 @@ in with self; { zoeppritz = derive2 { name="zoeppritz"; version="1.0-7"; sha256="14j9jl2g7gn94nzs96mwsgwlxnfbr1crjfmfwbi3rk367xi197jb"; depends=[]; }; zoib = derive2 { name="zoib"; version="1.5.1"; sha256="0lsyr8hfhk4dk129x2l1793v6nmf2k97wnsc44ir6ymip3i4zfld"; depends=[abind coda Formula matrixcalc rjags]; }; zonator = derive2 { name="zonator"; version="0.5.9"; sha256="04gjrm9nxnxsigrc30zghmv37ijsx27134hfnrbm51smw2y60dm4"; depends=[ggplot2 raster RColorBrewer reshape2 rgdal]; }; - zoo = derive2 { name="zoo"; version="1.8-2"; sha256="1lpwigxmi5sc23xrha4gcsccsm4yfsg0sa97y6vac3pg1lliblvx"; depends=[lattice]; }; + zoo = derive2 { name="zoo"; version="1.8-4"; sha256="1pywcp86kqijdrvl42qwdy75szrag9pzj0p88zbrj2r1klb8rn5i"; depends=[lattice]; }; zooaRch = derive2 { name="zooaRch"; version="1.2"; sha256="0grc378xppv0303sf4flfqz5002vq5a23nzbq4bsff41rww7dihc"; depends=[ggplot2]; }; zooaRchGUI = derive2 { name="zooaRchGUI"; version="1.0.2"; sha256="0snggx0d69ajz6xxwnv03l12jpjrjkpy2dgf4lrpm2l8rspd27i4"; depends=[car coda foreign geomorph ggplot2 MASS pgirmess raster readxl rjags sp spdep splancs tcltk2 tkrplot vegan]; }; - zoocat = derive2 { name="zoocat"; version="0.2.0"; sha256="1xqi90jnpqjdf3zr4pldh1a2gjppjwjrgkq71rvdhmcrf5s8jav0"; depends=[plyr reshape2 scales zoo]; }; + zoocat = derive2 { name="zoocat"; version="0.2.0.1"; sha256="0rdjgf1gvnixqwxrnvzswb53yzcvjgvfkrms6d38bhfyw320kgdp"; depends=[plyr reshape2 scales zoo]; }; zooimage = derive2 { name="zooimage"; version="5.5.2"; sha256="0ck8w0zb9l1n9xvjwqshq9q9l8pigy3yslq2hnfbgcwk17kk9mp8"; depends=[digest DT filehash jpeg MASS mda mlearning png shiny svDialogs svMisc tiff]; }; zoom = derive2 { name="zoom"; version="2.0.4"; sha256="03f5rxfr6ncf1j6vpn7pip21q7ylj4bx0a5xphqb6x6i33lxf1g5"; depends=[]; }; zoon = derive2 { name="zoon"; version="0.6.3"; sha256="11accyiv9n2zk7fq5bapbmv1ixadab19666i8w41bw642lafgivq"; depends=[dismo plyr randomForest raster RCurl rfigshare rgdal roxygen2 rworldmap SDMTools sp testthat]; }; zscorer = derive2 { name="zscorer"; version="0.1.0"; sha256="1199d72v9hm7k5jnll2ngn3jlfsiaxrrpbqzrkl0fghm6wnxcc6h"; depends=[]; }; zstdr = derive2 { name="zstdr"; version="0.1.1"; sha256="1rigsdh0f68l6vvvxp277cp8hbxj10x4588s6az1njxfpxrc8ajj"; depends=[Rcpp]; }; - ztable = derive2 { name="ztable"; version="0.1.8"; sha256="1hk5k9614n52dpfrhdws06w4gvwhnz8q47x4cwxx88qmrzm8z2m3"; depends=[]; }; + ztable = derive2 { name="ztable"; version="0.2.0"; sha256="0g7khk5ifsdh9p31wlwh2l5mn1hzxzpv6qcn1wh34vsfjdmijjwy"; depends=[flextable magrittr moonBook officer RColorBrewer scales stringr]; }; ztype = derive2 { name="ztype"; version="0.1.0"; sha256="0brbq2rgkl4mhjbb70kkfv47lzs66k9ppfs2klavcbripirxn5fx"; depends=[assertthat dplyr ggplot2 lubridate magrittr rvest stringr]; }; zyp = derive2 { name="zyp"; version="0.10-1"; sha256="0f1fqqxysf3psnvn08s5qly2c958h1hhznjjj8mvpjr5g6hqlr1k"; depends=[Kendall]; }; } diff --git a/pkgs/development/r-modules/default.nix b/pkgs/development/r-modules/default.nix index c9766a985f6f..428d6c60546e 100644 --- a/pkgs/development/r-modules/default.nix +++ b/pkgs/development/r-modules/default.nix @@ -278,11 +278,10 @@ let kza = [ pkgs.fftw.dev ]; libamtrack = [ pkgs.gsl_1 ]; magick = [ pkgs.imagemagick.dev ]; - mixcat = [ pkgs.gsl_1 ]; mvabund = [ pkgs.gsl_1 ]; mwaved = [ pkgs.fftw.dev ]; ncdf4 = [ pkgs.netcdf ]; - nloptr = [ pkgs.nlopt ]; + nloptr = [ pkgs.nlopt pkgs.pkgconfig ]; odbc = [ pkgs.unixODBC ]; outbreaker = [ pkgs.gsl_1 ]; pander = [ pkgs.pandoc pkgs.which ]; @@ -353,7 +352,6 @@ let sf = [ pkgs.gdal pkgs.proj pkgs.geos ]; showtext = [ pkgs.zlib pkgs.libpng pkgs.icu pkgs.freetype.dev ]; simplexreg = [ pkgs.gsl_1 ]; - SOD = [ pkgs.opencl-headers ]; spate = [ pkgs.fftw.dev ]; ssanv = [ pkgs.proj ]; stsm = [ pkgs.gsl_1 ]; @@ -602,11 +600,9 @@ let "RcmdrPlugin_coin" "RcmdrPlugin_depthTools" "RcmdrPlugin_DoE" - "RcmdrPlugin_doex" "RcmdrPlugin_EACSPIR" "RcmdrPlugin_EBM" "RcmdrPlugin_EcoVirtual" - "RcmdrPlugin_epack" "RcmdrPlugin_EZR" "RcmdrPlugin_FactoMineR" "RcmdrPlugin_HH" @@ -624,7 +620,6 @@ let "RcmdrPlugin_sampling" "RcmdrPlugin_SCDA" "RcmdrPlugin_SLC" - "RcmdrPlugin_SM" "RcmdrPlugin_sos" "RcmdrPlugin_steepness" "RcmdrPlugin_survival" @@ -641,7 +636,6 @@ let "rich" "rioja" "ripa" - "rite" "RNCEP" "RQDA" "RSDA" @@ -861,10 +855,9 @@ let }); nloptr = old.nloptr.overrideDerivation (attrs: { - configureFlags = [ - "--with-nlopt-cflags=-I${pkgs.nlopt}/include" - "--with-nlopt-libs='-L${pkgs.nlopt}/lib -lnlopt_cxx -lm'" - ]; + # Drop bundled nlopt source code. Probably unnecessary, but I want to be + # sure we're using the system library, not this one. + preConfigure = "rm -r src/nlopt_src"; }); V8 = old.V8.overrideDerivation (attrs: { @@ -948,6 +941,15 @@ let PKGCONFIG_CFLAGS = "-I${pkgs.openssl.dev}/include -I${pkgs.cyrus_sasl.dev}/include -I${pkgs.zlib.dev}/include"; PKGCONFIG_LIBS = "-Wl,-rpath,${pkgs.openssl.out}/lib -L${pkgs.openssl.out}/lib -L${pkgs.cyrus_sasl.out}/lib -L${pkgs.zlib.out}/lib -lssl -lcrypto -lsasl2 -lz"; }); + + ps = old.ps.overrideDerivation (attrs: { + preConfigure = "patchShebangs configure"; + }); + + rlang = old.rlang.overrideDerivation (attrs: { + preConfigure = "patchShebangs configure"; + }); + }; in self diff --git a/pkgs/development/ruby-modules/bundled-common/default.nix b/pkgs/development/ruby-modules/bundled-common/default.nix index f902ca58c384..415457b86e16 100644 --- a/pkgs/development/ruby-modules/bundled-common/default.nix +++ b/pkgs/development/ruby-modules/bundled-common/default.nix @@ -19,6 +19,7 @@ , meta ? {} , groups ? ["default"] , ignoreCollisions ? false +, buildInputs ? [] , ... }@args: @@ -96,7 +97,7 @@ let envPaths = lib.attrValues gems ++ lib.optional (!hasBundler) bundler; basicEnv = buildEnv { - inherit ignoreCollisions; + inherit buildInputs ignoreCollisions; name = name'; diff --git a/pkgs/development/ruby-modules/bundler-app/default.nix b/pkgs/development/ruby-modules/bundler-app/default.nix index c8f61389ad3f..60e3a38517ce 100644 --- a/pkgs/development/ruby-modules/bundler-app/default.nix +++ b/pkgs/development/ruby-modules/bundler-app/default.nix @@ -1,4 +1,4 @@ -{ lib, stdenv, callPackage, runCommand, ruby }@defs: +{ lib, stdenv, callPackage, runCommand, makeWrapper, ruby }@defs: # Use for simple installation of Ruby tools shipped in a Gem. # Start with a Gemfile that includes `gem <toolgem>` @@ -24,7 +24,9 @@ , gemset ? null , preferLocalBuild ? false , allowSubstitutes ? false +, installManpages ? true , meta ? {} +, buildInputs ? [] , postBuild ? "" , gemConfig ? null }@args: @@ -32,18 +34,29 @@ let basicEnv = (callPackage ../bundled-common {}) args; - cmdArgs = removeAttrs args [ "pname" "postBuild" "gemConfig" ] - // { inherit preferLocalBuild allowSubstitutes; }; # pass the defaults + cmdArgs = removeAttrs args [ "pname" "postBuild" "gemConfig" ] // { + inherit preferLocalBuild allowSubstitutes; # pass the defaults + + buildInputs = buildInputs ++ lib.optional (scripts != []) makeWrapper; + }; in - runCommand basicEnv.name cmdArgs '' - mkdir -p $out/bin; - ${(lib.concatMapStrings (x: "ln -s '${basicEnv}/bin/${x}' $out/bin/${x};\n") exes)} - ${(lib.concatMapStrings (s: "makeWrapper $out/bin/$(basename ${s}) $srcdir/${s} " + - "--set BUNDLE_GEMFILE ${basicEnv.confFiles}/Gemfile "+ - "--set BUNDLE_PATH ${basicEnv}/${ruby.gemPath} "+ - "--set BUNDLE_FROZEN 1 "+ - "--set GEM_HOME ${basicEnv}/${ruby.gemPath} "+ - "--set GEM_PATH ${basicEnv}/${ruby.gemPath} "+ - "--run \"cd $srcdir\";\n") scripts)} + runCommand basicEnv.name cmdArgs '' + mkdir -p $out/bin + ${(lib.concatMapStrings (x: "ln -s '${basicEnv}/bin/${x}' $out/bin/${x};\n") exes)} + ${(lib.concatMapStrings (s: "makeWrapper $out/bin/$(basename ${s}) $srcdir/${s} " + + "--set BUNDLE_GEMFILE ${basicEnv.confFiles}/Gemfile "+ + "--set BUNDLE_PATH ${basicEnv}/${ruby.gemPath} "+ + "--set BUNDLE_FROZEN 1 "+ + "--set GEM_HOME ${basicEnv}/${ruby.gemPath} "+ + "--set GEM_PATH ${basicEnv}/${ruby.gemPath} "+ + "--run \"cd $srcdir\";\n") scripts)} + + ${lib.optionalString installManpages '' + for section in {1..9}; do + mandir="$out/share/man/man$section" + find -L ${basicEnv}/${ruby.gemPath}/gems/${basicEnv.name} \( -wholename "*/man/*.$section" -o -wholename "*/man/man$section/*.$section" \) -print -execdir mkdir -p $mandir \; -execdir cp '{}' $mandir \; + done + ''} + ${postBuild} '' diff --git a/pkgs/development/ruby-modules/gem/default.nix b/pkgs/development/ruby-modules/gem/default.nix index d00ce7fccf5c..b0abb2c54fc5 100644 --- a/pkgs/development/ruby-modules/gem/default.nix +++ b/pkgs/development/ruby-modules/gem/default.nix @@ -44,6 +44,7 @@ lib.makeOverridable ( # git checkout). # If you need to apply patches, make sure to set `dontBuild = false`; , dontBuild ? true +, dontInstallManpages ? false , propagatedBuildInputs ? [] , propagatedUserEnvPkgs ? [] , buildFlags ? [] @@ -206,6 +207,14 @@ stdenv.mkDerivation ((builtins.removeAttrs attrs ["source"]) // { ruby ${./gem-post-build.rb} "$spec" ''} + ${lib.optionalString (!dontInstallManpages) '' + for section in {1..9}; do + mandir="$out/share/man/man$section" + find $out/lib \( -wholename "*/man/*.$section" -o -wholename "*/man/man$section/*.$section" \) \ + -execdir mkdir -p $mandir \; -execdir cp '{}' $mandir \; + done + ''} + runHook postInstall ''; diff --git a/pkgs/development/tools/analysis/cppcheck/default.nix b/pkgs/development/tools/analysis/cppcheck/default.nix index 5a095c8b6a0e..2f82c1ee66ad 100644 --- a/pkgs/development/tools/analysis/cppcheck/default.nix +++ b/pkgs/development/tools/analysis/cppcheck/default.nix @@ -2,12 +2,12 @@ stdenv.mkDerivation rec { pname = "cppcheck"; - version = "1.84"; + version = "1.85"; name = "${pname}-${version}"; src = fetchurl { url = "mirror://sourceforge/${pname}/${name}.tar.bz2"; - sha256 = "1rp8j0akxzcpvr2na5zchz8zxq5ldngiwj7f6sibjq5p3dcyn2w5"; + sha256 = "1xjc0gna9hrqc6liyzkzkr2naapj5bldzad8qdxcjgqz5yd6rb7i"; }; buildInputs = [ pcre ]; diff --git a/pkgs/development/tools/analysis/verasco/default.nix b/pkgs/development/tools/analysis/verasco/default.nix deleted file mode 100644 index 7f623e72dc31..000000000000 --- a/pkgs/development/tools/analysis/verasco/default.nix +++ /dev/null @@ -1,51 +0,0 @@ -{ stdenv, lib, fetchurl -, coq, ocaml, findlib, menhir, zarith -, tools ? stdenv.cc -}: - -assert lib.versionAtLeast ocaml.version "4.02"; - -stdenv.mkDerivation rec { - name = "verasco-1.3"; - src = fetchurl { - url = "http://compcert.inria.fr/verasco/release/${name}.tgz"; - sha256 = "0zvljrpwnv443k939zlw1f7ijwx18nhnpr8jl3f01jc5v66hr2k8"; - }; - - buildInputs = [ coq ocaml findlib menhir zarith ]; - - preConfigure = '' - substituteInPlace ./configure --replace '{toolprefix}gcc' '{toolprefix}cc' - ''; - - configureFlags = [ - "-toolprefix ${tools}/bin/" - (if stdenv.isDarwin then "ia32-macosx" else "ia32-linux") - ]; - - prefixKey = "-prefix "; - - enableParallelBuilding = true; - buildFlags = "proof extraction ccheck"; - - installPhase = '' - mkdir -p $out/bin - cp ccheck $out/bin/ - ln -s $out/bin/ccheck $out/bin/verasco - if [ -e verasco.ini ] - then - mkdir -p $out/share - cp verasco.ini $out/share/ - fi - mkdir -p $out/lib/compcert - cp -riv runtime/include $out/lib/compcert - ''; - - meta = { - homepage = http://compcert.inria.fr/verasco/; - description = "A static analyzer for the CompCert subset of ISO C 1999"; - maintainers = with stdenv.lib.maintainers; [ vbgl ]; - license = stdenv.lib.licenses.unfree; - platforms = with stdenv.lib.platforms; darwin ++ linux; - }; -} diff --git a/pkgs/development/tools/ansible-lint/default.nix b/pkgs/development/tools/ansible-lint/default.nix index c460662f4f88..5433725b3050 100644 --- a/pkgs/development/tools/ansible-lint/default.nix +++ b/pkgs/development/tools/ansible-lint/default.nix @@ -19,6 +19,10 @@ pythonPackages.buildPythonPackage rec { patchShebangs bin/ansible-lint ''; + preBuild = '' + export HOME="$TMP" + ''; + checkPhase = '' nosetests test ''; diff --git a/pkgs/development/tools/apktool/default.nix b/pkgs/development/tools/apktool/default.nix index 42deae45a25d..17b0265fddde 100644 --- a/pkgs/development/tools/apktool/default.nix +++ b/pkgs/development/tools/apktool/default.nix @@ -23,7 +23,7 @@ stdenv.mkDerivation rec { mkdir -p "$out/bin" makeWrapper "${jre}/bin/java" "$out/bin/apktool" \ --add-flags "-jar $out/libexec/apktool/apktool.jar" \ - --prefix PATH : "${buildTools}/build-tools/25.0.1/" + --prefix PATH : "${buildTools.v25_0_1}/build-tools/25.0.1/" ''; meta = with stdenv.lib; { diff --git a/pkgs/development/tools/asmfmt/default.nix b/pkgs/development/tools/asmfmt/default.nix new file mode 100644 index 000000000000..d2cb7e807b58 --- /dev/null +++ b/pkgs/development/tools/asmfmt/default.nix @@ -0,0 +1,37 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +, fetchpatch +}: + +buildGoPackage rec { + name = "asmfmt-${version}"; + version = "1.1"; + + goPackagePath = "github.com/klauspost/asmfmt"; + + src = fetchFromGitHub { + owner = "klauspost"; + repo = "asmfmt"; + rev = "v${version}"; + sha256 = "08mybfizcvck460axakycz9ndzcgwqilp5mmgm4bl8hfrn36mskw"; + }; + + patches = [ + (fetchpatch { + excludes = ["README.md"]; + url = "https://github.com/klauspost/asmfmt/commit/39a37c8aed8095e0fdfb07f78fc8acbd465d9627.patch"; + sha256 = "18bc77l87mf0yvqc3adlakxz6wflyqfsc2wrmh9q0nlqghlmnw5k"; + }) + ]; + + goDeps = ./deps.nix; + + meta = with lib; { + description = "Go Assembler Formatter"; + homepage = https://github.com/klauspost/asmfmt; + license = licenses.mit; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/asmfmt/deps.nix b/pkgs/development/tools/asmfmt/deps.nix new file mode 100644 index 000000000000..0288fc206d49 --- /dev/null +++ b/pkgs/development/tools/asmfmt/deps.nix @@ -0,0 +1,20 @@ +[ + { + goPackagePath = "golang.org/x/tools"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/tools"; + rev = "3a10b9bf0a52df7e992a8c3eb712a86d3c896c75"; + sha256 = "19f3dijcc54jnd7458jab2dgpd0gzccmv2qympd9wi8cc8jpnhws"; + }; + } + { + goPackagePath = "sourcegraph.com/sqs/goreturns"; + fetch = { + type = "git"; + url = "https://github.com/sqs/goreturns"; + rev = "538ac601451833c7c4449f8431d65d53c1c60e41"; + sha256 = "0gcplch8zmcgwl6xvcffxg50g3xnf60n7dlqxgn51179qcjr354p"; + }; + } +] diff --git a/pkgs/development/tools/build-managers/bazel/bazel-deps/default.nix b/pkgs/development/tools/build-managers/bazel/bazel-deps/default.nix index af8cd5faacde..142f729517d5 100644 --- a/pkgs/development/tools/build-managers/bazel/bazel-deps/default.nix +++ b/pkgs/development/tools/build-managers/bazel/bazel-deps/default.nix @@ -2,7 +2,7 @@ buildBazelPackage rec { name = "bazel-deps-${version}"; - version = "2018-08-16"; + version = "2018-11-01"; meta = with stdenv.lib; { homepage = "https://github.com/johnynek/bazel-deps"; @@ -15,8 +15,8 @@ buildBazelPackage rec { src = fetchFromGitHub { owner = "johnynek"; repo = "bazel-deps"; - rev = "942a0b03cbf159dd6e0f0f40787d6d8e4e832d81"; - sha256 = "0ls2jvz9cxa169a8pbbykv2d4dik4ipf7dj1lkqx5g0ss7lgs6q5"; + rev = "1af8921d52f053fad575f26762533a3823b4a847"; + sha256 = "0srz0sbz4bq9n7cp4g1n3kd3j6rcjqfi25sq8aa64l27yqzbk53x"; }; bazelTarget = "//src/scala/com/github/johnynek/bazel_deps:parseproject_deploy.jar"; @@ -66,12 +66,13 @@ buildBazelPackage rec { find . -type d -empty -delete ''; - sha256 = "0jkzf1hay0h8ksk9lhfvdliac6c5d7nih934i1xjbrn6zqlivy19"; + sha256 = "1gvl4a9z8p4ch2gmcj3lpp0imrkrvy8wng949p3wlkibi14hc6ww"; }; buildAttrs = { installPhase = '' mkdir -p $out/bin/bazel-bin/src/scala/com/github/johnynek/bazel_deps + cp gen_maven_deps.sh $out/bin wrapProgram "$out/bin/gen_maven_deps.sh" --set JAVA_HOME "${jre}" --prefix PATH : ${lib.makeBinPath [ jre ]} cp bazel-bin/src/scala/com/github/johnynek/bazel_deps/parseproject_deploy.jar $out/bin/bazel-bin/src/scala/com/github/johnynek/bazel_deps diff --git a/pkgs/development/tools/build-managers/meson/default.nix b/pkgs/development/tools/build-managers/meson/default.nix index 35ae59af617c..0ba44b1b17a7 100644 --- a/pkgs/development/tools/build-managers/meson/default.nix +++ b/pkgs/development/tools/build-managers/meson/default.nix @@ -1,4 +1,4 @@ -{ lib, python3Packages, stdenv, writeTextDir, substituteAll }: +{ lib, python3Packages, stdenv, writeTextDir, substituteAll, targetPackages }: python3Packages.buildPythonApplication rec { version = "0.46.1"; @@ -47,20 +47,20 @@ python3Packages.buildPythonApplication rec { crossFile = writeTextDir "cross-file.conf" '' [binaries] - c = '${stdenv.cc.targetPrefix}cc' - cpp = '${stdenv.cc.targetPrefix}c++' - ar = '${stdenv.cc.bintools.targetPrefix}ar' - strip = '${stdenv.cc.bintools.targetPrefix}strip' + c = '${targetPackages.stdenv.cc.targetPrefix}cc' + cpp = '${targetPackages.stdenv.cc.targetPrefix}c++' + ar = '${targetPackages.stdenv.cc.bintools.targetPrefix}ar' + strip = '${targetPackages.stdenv.cc.bintools.targetPrefix}strip' pkgconfig = 'pkg-config' [properties] needs_exe_wrapper = true [host_machine] - system = '${stdenv.targetPlatform.parsed.kernel.name}' - cpu_family = '${stdenv.targetPlatform.parsed.cpu.family}' - cpu = '${stdenv.targetPlatform.parsed.cpu.name}' - endian = ${if stdenv.targetPlatform.isLittleEndian then "'little'" else "'big'"} + system = '${targetPackages.stdenv.targetPlatform.parsed.kernel.name}' + cpu_family = '${targetPackages.stdenv.targetPlatform.parsed.cpu.family}' + cpu = '${targetPackages.stdenv.targetPlatform.parsed.cpu.name}' + endian = ${if targetPackages.stdenv.targetPlatform.isLittleEndian then "'little'" else "'big'"} ''; # 0.45 update enabled tests but they are failing @@ -70,7 +70,7 @@ python3Packages.buildPythonApplication rec { inherit (stdenv) cc; - isCross = stdenv.buildPlatform != stdenv.hostPlatform; + isCross = stdenv.targetPlatform != stdenv.hostPlatform; meta = with lib; { homepage = http://mesonbuild.com; diff --git a/pkgs/development/tools/check/default.nix b/pkgs/development/tools/check/default.nix new file mode 100644 index 000000000000..dfa164e6755c --- /dev/null +++ b/pkgs/development/tools/check/default.nix @@ -0,0 +1,30 @@ +{ buildGoPackage +, lib +, fetchFromGitLab +}: + +buildGoPackage rec { + name = "check-unstable-${version}"; + version = "2018-09-12"; + rev = "88db195993f8e991ad402754accd0635490769f9"; + + goPackagePath = "gitlab.com/opennota/check"; + + src = fetchFromGitLab { + inherit rev; + + owner = "opennota"; + repo = "check"; + sha256 = "1983xmdkgpqda4qz8ashc6xv1zg5jl4zly3w566grxc5sfxpgf0i"; + }; + + goDeps = ./deps.nix; + + meta = with lib; { + description = "A set of utilities for checking Go sources."; + homepage = https://gitlab.com/opennota/check; + license = licenses.gpl3; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/check/deps.nix b/pkgs/development/tools/check/deps.nix new file mode 100644 index 000000000000..b9c50d95d117 --- /dev/null +++ b/pkgs/development/tools/check/deps.nix @@ -0,0 +1,11 @@ +[ + { + goPackagePath = "golang.org/x/tools"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/tools"; + rev = "677d2ff680c1"; + sha256 = "0vp1w1haqcjd82dxd6x9xrllbfwvm957rxwkpji96cgvhsli2bq5"; + }; + } +] diff --git a/pkgs/development/tools/cppclean/default.nix b/pkgs/development/tools/cppclean/default.nix new file mode 100644 index 000000000000..96fe07a7799a --- /dev/null +++ b/pkgs/development/tools/cppclean/default.nix @@ -0,0 +1,31 @@ +{ stdenv, lib, fetchFromGitHub, python3Packages }: + +with python3Packages; + +buildPythonApplication rec { + name = "cppclean-unstable-${version}"; + version = "2018-05-12"; + + src = fetchFromGitHub { + owner = "myint"; + repo = "cppclean"; + rev = "e7da41eca5e1fd2bd1dddd6655e50128bb96dc28"; + sha256 = "0pymh6r7y19bwcypfkmgwyixrx36pmz338jd83yrjflsbjlriqm4"; + }; + + postUnpack = '' + patchShebangs . + ''; + + checkPhase = '' + ./test.bash + ''; + + meta = with stdenv.lib; { + description = "Finds problems in C++ source that slow development of large code bases"; + homepage = https://github.com/myint/cppclean; + license = licenses.asl20; + maintainers = with maintainers; [ nthorne ]; + platforms = platforms.linux; + }; +} diff --git a/pkgs/development/tools/database/timescaledb-parallel-copy/default.nix b/pkgs/development/tools/database/timescaledb-parallel-copy/default.nix new file mode 100644 index 000000000000..d667e49e7cbe --- /dev/null +++ b/pkgs/development/tools/database/timescaledb-parallel-copy/default.nix @@ -0,0 +1,26 @@ +{ stdenv, buildGoPackage, fetchFromGitHub }: + +buildGoPackage rec { + name = "timescaledb-parallel-copy-${version}"; + version = "2018-05-14"; + + owner = "timescale"; + repo = "timescaledb-parallel-copy"; + + goPackagePath = with src; "github.com/${owner}/${repo}"; + goDeps = ./deps.nix; + + src = fetchFromGitHub { + inherit owner repo; + rev = "20d3e8f8219329f2f4b0a5aa985f280dd04d10bb"; + sha256 = "0waaccw991cnxaxjdxh9ksb94kiiyx1r7gif6pkd5k58js0kfvdn"; + }; + + meta = with stdenv.lib; { + description = "Bulk, parallel insert of CSV records into PostgreSQL"; + homepage = http://github.com/timescale/timescaledb-parallel-copy; + license = licenses.asl20; + platforms = platforms.linux; + maintainers = with maintainers; [ thoughtpolice ]; + }; +} diff --git a/pkgs/development/tools/database/timescaledb-parallel-copy/deps.nix b/pkgs/development/tools/database/timescaledb-parallel-copy/deps.nix new file mode 100644 index 000000000000..c672611e09c1 --- /dev/null +++ b/pkgs/development/tools/database/timescaledb-parallel-copy/deps.nix @@ -0,0 +1,21 @@ +# This file was generated by https://github.com/kamilchm/go2nix v1.2.1 +[ + { + goPackagePath = "github.com/jmoiron/sqlx"; + fetch = { + type = "git"; + url = "https://github.com/jmoiron/sqlx"; + rev = "0dae4fefe7c0e190f7b5a78dac28a1c82cc8d849"; + sha256 = "0r8fyj70n0v84byvagw8w8rzz532s94mjr72b9sx018j0b6xglmy"; + }; + } + { + goPackagePath = "github.com/lib/pq"; + fetch = { + type = "git"; + url = "https://github.com/lib/pq"; + rev = "90697d60dd844d5ef6ff15135d0203f65d2f53b8"; + sha256 = "0hb4bfsk8g5473yzbf3lzrb373xicakjznkf0v085xgimz991i9r"; + }; + } +] diff --git a/pkgs/development/tools/deadcode/default.nix b/pkgs/development/tools/deadcode/default.nix new file mode 100644 index 000000000000..fbed4e905cfc --- /dev/null +++ b/pkgs/development/tools/deadcode/default.nix @@ -0,0 +1,31 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +# TODO(yl): should we package https://github.com/remyoudompheng/go-misc instead of +# the standalone extract of deadcode from it? +buildGoPackage rec { + name = "deadcode-unstable-${version}"; + version = "2016-07-24"; + rev = "210d2dc333e90c7e3eedf4f2242507a8e83ed4ab"; + + goPackagePath = "github.com/tsenart/deadcode"; + excludedPackages = "\\(cmd/fillswitch/test-fixtures\\)"; + + src = fetchFromGitHub { + inherit rev; + + owner = "tsenart"; + repo = "deadcode"; + sha256 = "05kif593f4wygnrq2fdjhn7kkcpdmgjnykcila85d0gqlb1f36g0"; + }; + + meta = with lib; { + description = "deadcode is a very simple utility which detects unused declarations in a Go package."; + homepage = https://github.com/remyoudompheng/go-misc/tree/master/deadcode; + license = licenses.bsd3; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/errcheck/default.nix b/pkgs/development/tools/errcheck/default.nix new file mode 100644 index 000000000000..1ce49a4cbb9d --- /dev/null +++ b/pkgs/development/tools/errcheck/default.nix @@ -0,0 +1,29 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "errcheck-${version}"; + version = "1.1.0"; + + goPackagePath = "github.com/kisielk/errcheck"; + excludedPackages = "\\(testdata\\)"; + + src = fetchFromGitHub { + owner = "kisielk"; + repo = "errcheck"; + rev = "v${version}"; + sha256 = "19vd4rxmqbk5lpiav3pf7df3yjlz0l0dwx9mn0gjq5f998iyhy6y"; + }; + + goDeps = ./deps.nix; + + meta = with lib; { + description = "errcheck is a program for checking for unchecked errors in go programs."; + homepage = https://github.com/kisielk/errcheck; + license = licenses.mit; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/errcheck/deps.nix b/pkgs/development/tools/errcheck/deps.nix new file mode 100644 index 000000000000..8470c9e12aa6 --- /dev/null +++ b/pkgs/development/tools/errcheck/deps.nix @@ -0,0 +1,20 @@ +[ + { + goPackagePath = "github.com/kisielk/gotool"; + fetch = { + type = "git"; + url = "https://github.com/kisielk/gotool"; + rev = "80517062f582ea3340cd4baf70e86d539ae7d84d"; + sha256 = "14af2pa0ssyp8bp2mvdw184s5wcysk6akil3wzxmr05wwy951iwn"; + }; + } + { + goPackagePath = "golang.org/x/tools"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/tools"; + rev = "3a10b9bf0a52df7e992a8c3eb712a86d3c896c75"; + sha256 = "19f3dijcc54jnd7458jab2dgpd0gzccmv2qympd9wi8cc8jpnhws"; + }; + } +] diff --git a/pkgs/development/tools/flyway/default.nix b/pkgs/development/tools/flyway/default.nix index 70f6d8021ff8..7386dc0eeeba 100644 --- a/pkgs/development/tools/flyway/default.nix +++ b/pkgs/development/tools/flyway/default.nix @@ -1,22 +1,23 @@ { stdenv, fetchurl, jre_headless, makeWrapper }: let - version = "5.1.4"; + version = "5.2.1"; in stdenv.mkDerivation { name = "flyway-${version}"; src = fetchurl { - url = "https://repo1.maven.org/maven2/org/flywaydb/flyway-commandline/5.1.4/flyway-commandline-${version}.tar.gz"; - sha256 = "1raz125k55v6xa8gp6ylcjxz77r5364xqp9di46rayx3z2282f7q"; + url = "https://repo1.maven.org/maven2/org/flywaydb/flyway-commandline/${version}/flyway-commandline-${version}.tar.gz"; + sha256 = "0lm536qc8pqj4s21dd47gi99nwwflk17gqzfwaflghw3fnhn7i1s"; }; buildInputs = [ makeWrapper ]; dontBuild = true; dontStrip = true; installPhase = '' mkdir -p $out/bin $out/share/flyway - cp -r sql jars lib drivers $out/share/flyway + cp -r sql jars drivers conf $out/share/flyway + cp -r lib/community $out/share/flyway/lib makeWrapper "${jre_headless}/bin/java" $out/bin/flyway \ --add-flags "-Djava.security.egd=file:/dev/../dev/urandom" \ - --add-flags "-cp '$out/share/flyway/lib/*:$out/share/flyway/drivers/*'" \ + --add-flags "-classpath '$out/share/flyway/lib/*:$out/share/flyway/drivers/*'" \ --add-flags "org.flywaydb.commandline.Main" ''; meta = with stdenv.lib; { diff --git a/pkgs/development/tools/global-platform-pro/default.nix b/pkgs/development/tools/global-platform-pro/default.nix index ab32216de80d..9841e7900cd5 100644 --- a/pkgs/development/tools/global-platform-pro/default.nix +++ b/pkgs/development/tools/global-platform-pro/default.nix @@ -62,6 +62,7 @@ stdenv.mkDerivation rec { ''; homepage = https://github.com/martinpaljak/GlobalPlatformPro; license = with licenses; [ lgpl3 ]; + maintainers = with maintainers; [ ekleog ]; platforms = platforms.all; }; } diff --git a/pkgs/development/tools/go-tools/default.nix b/pkgs/development/tools/go-tools/default.nix new file mode 100644 index 000000000000..7e599ed8de71 --- /dev/null +++ b/pkgs/development/tools/go-tools/default.nix @@ -0,0 +1,29 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "go-tools-${version}"; + version = "2017.2.2"; + + goPackagePath = "honnef.co/go/tools"; + excludedPackages = ''\(simple\|ssa\|ssa/ssautil\|lint\|staticcheck\|unused\)/testdata''; + + src = fetchFromGitHub { + owner = "dominikh"; + repo = "go-tools"; + rev = "${version}"; + sha256 = "1khl6szjj0skkfqp234p9rf3icik7fw2pk2x0wbj3wa9q3f84hb7"; + }; + + goDeps = ./deps.nix; + + meta = with lib; { + description = "A collection of tools and libraries for working with Go code, including linters and static analysis."; + homepage = https://staticcheck.io; + license = licenses.mit; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/go-tools/deps.nix b/pkgs/development/tools/go-tools/deps.nix new file mode 100644 index 000000000000..afe5e50e47bd --- /dev/null +++ b/pkgs/development/tools/go-tools/deps.nix @@ -0,0 +1,20 @@ +[ + { + goPackagePath = "github.com/kisielk/gotool"; + fetch = { + type = "git"; + url = "https://github.com/kisielk/gotool"; + rev = "80517062f582ea3340cd4baf70e86d539ae7d84d"; + sha256 = "14af2pa0ssyp8bp2mvdw184s5wcysk6akil3wzxmr05wwy951iwn"; + }; + } + { + goPackagePath = "golang.org/x/tools"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/tools"; + rev = "96e9e165b75e735822645eff82850b08c377be36"; + sha256 = "1zj9ck5sg9b0pphxybmvxf64hhcap7v7j37fx3v5aknf18crjjdg"; + }; + } +] diff --git a/pkgs/development/tools/gocode-gomod/default.nix b/pkgs/development/tools/gocode-gomod/default.nix new file mode 100644 index 000000000000..b0069d3488e0 --- /dev/null +++ b/pkgs/development/tools/gocode-gomod/default.nix @@ -0,0 +1,50 @@ +{ stdenv, buildGoPackage, fetchFromGitHub }: + +buildGoPackage rec { + name = "gocode-gomod-unstable-${version}"; + version = "2018-10-16"; + rev = "12640289f65065d652cc942ffa01a52bece1dd53"; + + goPackagePath = "github.com/stamblerre/gocode"; + + # we must allow references to the original `go` package, + # because `gocode` needs to dig into $GOROOT to provide completions for the + # standard packages. + allowGoReference = true; + + excludedPackages = ''internal/suggest/testdata''; + + src = fetchFromGitHub { + inherit rev; + + owner = "stamblerre"; + repo = "gocode"; + sha256 = "1avv0b5p2l8pv38m5gg97k57ndr5k9yy0rfkmmwjq96pa221hs1q"; + }; + + goDeps = ./deps.nix; + + postInstall = '' + mv $bin/bin/gocode $bin/bin/gocode-gomod + ''; + + meta = with stdenv.lib; { + description = "An autocompletion daemon for the Go programming language"; + longDescription = '' + Gocode is a helper tool which is intended to be integrated with your + source code editor, like vim, neovim and emacs. It provides several + advanced capabilities, which currently includes: + + - Context-sensitive autocompletion + + It is called daemon, because it uses client/server architecture for + caching purposes. In particular, it makes autocompletions very fast. + Typical autocompletion time with warm cache is 30ms, which is barely + noticeable. + ''; + homepage = https://github.com/stamblerre/gocode; + license = licenses.mit; + platforms = platforms.all; + maintainers = with maintainers; [ kalbasit ]; + }; +} diff --git a/pkgs/development/tools/gocode-gomod/deps.nix b/pkgs/development/tools/gocode-gomod/deps.nix new file mode 100644 index 000000000000..ac9662697063 --- /dev/null +++ b/pkgs/development/tools/gocode-gomod/deps.nix @@ -0,0 +1,11 @@ +[ + { + goPackagePath = "golang.org/x/tools"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/tools"; + rev = "78dc5bac0cacea7969e98b79c3b86597e0aa4e25"; + sha256 = "16jg2x1sfm39kz4rchn0gxyq99fnkxw6v51wxriqbs76a2wrznp9"; + }; + } +] diff --git a/pkgs/development/tools/gocode/default.nix b/pkgs/development/tools/gocode/default.nix index bb44074dfc75..3351c0e986b3 100644 --- a/pkgs/development/tools/gocode/default.nix +++ b/pkgs/development/tools/gocode/default.nix @@ -2,10 +2,11 @@ buildGoPackage rec { name = "gocode-unstable-${version}"; - version = "2018-10-22"; - rev = "e893215113e5f7594faa3a8eb176c2700c921276"; + version = "2018-11-05"; + rev = "0af7a86943a6e0237c90f8aeb74a882e1862c898"; goPackagePath = "github.com/mdempsky/gocode"; + excludedPackages = ''internal/suggest/testdata''; # we must allow references to the original `go` package, # because `gocode` needs to dig into $GOROOT to provide completions for the @@ -17,17 +18,11 @@ buildGoPackage rec { owner = "mdempsky"; repo = "gocode"; - sha256 = "1zsll7yghv64890k7skl0g2lg9rsaiisgrfnb8kshsxrcxi1kc2l"; + sha256 = "0fxqn0v6dbwarn444lc1xrx5vfkcidi73f4ba7l4clsb9qdqgyam"; }; goDeps = ./deps.nix; - preBuild = '' - # getting an error building the testdata because they contain invalid files - # on purpose as part of the testing. - rm -r go/src/$goPackagePath/internal/suggest/testdata - ''; - meta = with stdenv.lib; { description = "An autocompletion daemon for the Go programming language"; longDescription = '' diff --git a/pkgs/development/tools/gocode/deps.nix b/pkgs/development/tools/gocode/deps.nix index 4eefdd9c6d04..ac9662697063 100644 --- a/pkgs/development/tools/gocode/deps.nix +++ b/pkgs/development/tools/gocode/deps.nix @@ -4,8 +4,8 @@ fetch = { type = "git"; url = "https://go.googlesource.com/tools"; - rev = "6fe81c087942f588f40c3f67b41ce284f2f70eee"; - sha256 = "04yl7rk2lf94bxz74ja5snh7ava9gcnf2yx6y002pfkk538r6w5d"; + rev = "78dc5bac0cacea7969e98b79c3b86597e0aa4e25"; + sha256 = "16jg2x1sfm39kz4rchn0gxyq99fnkxw6v51wxriqbs76a2wrznp9"; }; } ] diff --git a/pkgs/development/tools/goconst/default.nix b/pkgs/development/tools/goconst/default.nix new file mode 100644 index 000000000000..9ef94ffdc7fa --- /dev/null +++ b/pkgs/development/tools/goconst/default.nix @@ -0,0 +1,27 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "goconst-${version}"; + version = "1.1.0"; + + goPackagePath = "github.com/jgautheron/goconst"; + excludedPackages = ''testdata''; + + src = fetchFromGitHub { + owner = "jgautheron"; + repo = "goconst"; + rev = version; + sha256 = "0zhscvv9w54q1h2vs8xx3qkz98cf36qhxjvdq0xyz3qvn4vhnyw6"; + }; + + meta = with lib; { + description = "Find in Go repeated strings that could be replaced by a constant"; + homepage = https://github.com/jgautheron/goconst; + license = licenses.mit; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/gocyclo/default.nix b/pkgs/development/tools/gocyclo/default.nix new file mode 100644 index 000000000000..91ebaff803eb --- /dev/null +++ b/pkgs/development/tools/gocyclo/default.nix @@ -0,0 +1,28 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "gocyclo-unstable-${version}"; + version = "2015-02-08"; + rev = "aa8f8b160214d8dfccfe3e17e578dd0fcc6fede7"; + + goPackagePath = "github.com/alecthomas/gocyclo"; + + src = fetchFromGitHub { + inherit rev; + + owner = "alecthomas"; + repo = "gocyclo"; + sha256 = "094rj97q38j53lmn2scshrg8kws8c542yq5apih1ahm9wdkv8pxr"; + }; + + meta = with lib; { + description = "Calculate cyclomatic complexities of functions in Go source code."; + homepage = https://github.com/alecthomas/gocyclo; + license = licenses.bsd3; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/gogetdoc/default.nix b/pkgs/development/tools/gogetdoc/default.nix new file mode 100644 index 000000000000..7724ee49465c --- /dev/null +++ b/pkgs/development/tools/gogetdoc/default.nix @@ -0,0 +1,31 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "gogetdoc-unstable-${version}"; + version = "2018-10-25"; + rev = "9098cf5fc236a5e25060730544af2ba6d65cd968"; + + goPackagePath = "github.com/zmb3/gogetdoc"; + excludedPackages = "\\(testdata\\)"; + + src = fetchFromGitHub { + inherit rev; + + owner = "zmb3"; + repo = "gogetdoc"; + sha256 = "159dgkd2lz07kimbpzminli5p539l4ry0dr93r46iz3lk5q76znl"; + }; + + goDeps = ./deps.nix; + + meta = with lib; { + description = "Gets documentation for items in Go source code"; + homepage = https://github.com/zmb3/gogetdoc; + license = licenses.bsd3; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/gogetdoc/deps.nix b/pkgs/development/tools/gogetdoc/deps.nix new file mode 100644 index 000000000000..d770057d1d78 --- /dev/null +++ b/pkgs/development/tools/gogetdoc/deps.nix @@ -0,0 +1,13 @@ +# file generated from go.mod using vgo2nix (https://github.com/adisbladis/vgo2nix) +[ + + { + goPackagePath = "golang.org/x/tools"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/tools"; + rev = "6adeb8aab2de"; + sha256 = "0kylkki0ksdm12ppl37fghzbma9hmgqwph0nwngv08v4blk6li6k"; + }; + } +] diff --git a/pkgs/development/tools/gometalinter/default.nix b/pkgs/development/tools/gometalinter/default.nix new file mode 100644 index 000000000000..cce678e9d073 --- /dev/null +++ b/pkgs/development/tools/gometalinter/default.nix @@ -0,0 +1,70 @@ +{ buildGoPackage +, deadcode +, errcheck +, fetchFromGitHub +, go +, go-check +, go-tools +, goconst +, gocyclo +, golint +, gosec +, gotools +, ineffassign +, maligned +, interfacer +, lib +, makeWrapper +, unconvert +}: + +with lib; + +let + runtimeDeps = [ + deadcode + errcheck + go + go-check + go-tools + goconst + gocyclo + golint + gosec + gotools + ineffassign + interfacer + maligned + unconvert + ]; + +in buildGoPackage rec { + name = "gometalinter-${version}"; + version = "2.0.11"; + + goPackagePath = "github.com/alecthomas/gometalinter"; + excludedPackages = "\\(regressiontests\\)"; + + src = fetchFromGitHub { + owner = "alecthomas"; + repo = "gometalinter"; + rev = "v${version}"; + sha256 = "08p7bwvhpgizif8qi59m8mm3mcny70x9msbk8m8vjpphsq55wha4"; + }; + + postInstall = '' + wrapProgram $bin/bin/gometalinter --prefix PATH : "${makeBinPath runtimeDeps}" + ''; + + buildInputs = [ makeWrapper ]; + + allowGoReference = true; + + meta = with lib; { + description = "Concurrently run Go lint tools and normalise their output"; + homepage = https://github.com/alecthomas/gometalinter; + license = licenses.mit; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/gosec/default.nix b/pkgs/development/tools/gosec/default.nix new file mode 100644 index 000000000000..2cffd86f3965 --- /dev/null +++ b/pkgs/development/tools/gosec/default.nix @@ -0,0 +1,29 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "gosec-${version}"; + version = "1.1.0"; + + goPackagePath = "github.com/securego/gosec"; + excludedPackages = ''cmd/tlsconfig''; + + src = fetchFromGitHub { + owner = "securego"; + repo = "gosec"; + rev = "${version}"; + sha256 = "0vjn3g6w4y4ayx0g766jp31vb78cipl90fcg0mccjr0a539qrpy6"; + }; + + goDeps = ./deps.nix; + + meta = with lib; { + description = "Golang security checker"; + homepage = https://github.com/securego/gosec; + license = licenses.asl20 ; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/gosec/deps.nix b/pkgs/development/tools/gosec/deps.nix new file mode 100644 index 000000000000..80a77e7fb807 --- /dev/null +++ b/pkgs/development/tools/gosec/deps.nix @@ -0,0 +1,193 @@ +# file generated from go.mod using vgo2nix (https://github.com/adisbladis/vgo2nix) +[ + + { + goPackagePath = "github.com/davecgh/go-spew"; + fetch = { + type = "git"; + url = "https://github.com/davecgh/go-spew"; + rev = "v1.1.1"; + sha256 = "0hka6hmyvp701adzag2g26cxdj47g21x6jz4sc6jjz1mn59d474y"; + }; + } + + { + goPackagePath = "github.com/golang/protobuf"; + fetch = { + type = "git"; + url = "https://github.com/golang/protobuf"; + rev = "v1.2.0"; + sha256 = "0kf4b59rcbb1cchfny2dm9jyznp8ri2hsb14n8iak1q8986xa0ab"; + }; + } + + { + goPackagePath = "github.com/kisielk/gotool"; + fetch = { + type = "git"; + url = "https://github.com/kisielk/gotool"; + rev = "0de1eaf82fa3"; + sha256 = "177af7bjq6clmkqshnmnwlpwvx80kpi2277q275iwq59lp48viq1"; + }; + } + + { + goPackagePath = "github.com/kr/pretty"; + fetch = { + type = "git"; + url = "https://github.com/kr/pretty"; + rev = "v0.1.0"; + sha256 = "18m4pwg2abd0j9cn5v3k2ksk9ig4vlwxmlw9rrglanziv9l967qp"; + }; + } + + { + goPackagePath = "github.com/kr/pty"; + fetch = { + type = "git"; + url = "https://github.com/kr/pty"; + rev = "v1.1.1"; + sha256 = "0383f0mb9kqjvncqrfpidsf8y6ns5zlrc91c6a74xpyxjwvzl2y6"; + }; + } + + { + goPackagePath = "github.com/kr/text"; + fetch = { + type = "git"; + url = "https://github.com/kr/text"; + rev = "v0.1.0"; + sha256 = "1gm5bsl01apvc84bw06hasawyqm4q84vx1pm32wr9jnd7a8vjgj1"; + }; + } + + { + goPackagePath = "github.com/nbutton23/zxcvbn-go"; + fetch = { + type = "git"; + url = "https://github.com/nbutton23/zxcvbn-go"; + rev = "a22cb81b2ecd"; + sha256 = "0hm16vc7xrw0cqla6xcn59bb7n2sa0j8rkniywn5dqnbrpza12cd"; + }; + } + + { + goPackagePath = "github.com/onsi/ginkgo"; + fetch = { + type = "git"; + url = "https://github.com/onsi/ginkgo"; + rev = "11459a886d9c"; + sha256 = "1nswc1fnrrs792qbix05h91bilj8rr3wxmxgwi97p2gjk0r292zh"; + }; + } + + { + goPackagePath = "github.com/onsi/gomega"; + fetch = { + type = "git"; + url = "https://github.com/onsi/gomega"; + rev = "dcabb60a477c"; + sha256 = "1775lv5jbsgv3ghq5v2827slqlhqdadrzc1nkpq4y0hdv2qzrgkm"; + }; + } + + { + goPackagePath = "github.com/pmezard/go-difflib"; + fetch = { + type = "git"; + url = "https://github.com/pmezard/go-difflib"; + rev = "v1.0.0"; + sha256 = "0c1cn55m4rypmscgf0rrb88pn58j3ysvc2d0432dp3c6fqg6cnzw"; + }; + } + + { + goPackagePath = "github.com/ryanuber/go-glob"; + fetch = { + type = "git"; + url = "https://github.com/ryanuber/go-glob"; + rev = "256dc444b735"; + sha256 = "07rsd7hranghwc68ib0r2zxd9d5djanzjvd84j9dgj3wqsyg5mi2"; + }; + } + + { + goPackagePath = "github.com/stretchr/testify"; + fetch = { + type = "git"; + url = "https://github.com/stretchr/testify"; + rev = "v1.2.2"; + sha256 = "0dlszlshlxbmmfxj5hlwgv3r22x0y1af45gn1vd198nvvs3pnvfs"; + }; + } + + { + goPackagePath = "golang.org/x/net"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/net"; + rev = "8351a756f30f"; + sha256 = "0b6m579i3wrx1m69mqkdng5gjfssprxx0pg45kzrdi68sh0zr5d1"; + }; + } + + { + goPackagePath = "golang.org/x/sync"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/sync"; + rev = "1d60e4601c6f"; + sha256 = "046jlanz2lkxq1r57x9bl6s4cvfqaic6p2xybsj8mq1120jv4rs6"; + }; + } + + { + goPackagePath = "golang.org/x/sys"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/sys"; + rev = "164713f0dfce"; + sha256 = "1qn9vvyqsaaj0az0rbilzc4pfv9sl4vh78c2g37yya5gcdnarh3w"; + }; + } + + { + goPackagePath = "golang.org/x/text"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/text"; + rev = "1cbadb444a80"; + sha256 = "0ih9ysagh4ylj08393497sscf3yziybc6acg4mrh0wa7mld75j56"; + }; + } + + { + goPackagePath = "golang.org/x/tools"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/tools"; + rev = "e531a2a1c15f"; + sha256 = "0740w56nmjqdj7ld1h3gpcpi3x8n81bdx0pp267rz9hmwkrb2s1c"; + }; + } + + { + goPackagePath = "gopkg.in/check.v1"; + fetch = { + type = "git"; + url = "https://gopkg.in/check.v1"; + rev = "788fd7840127"; + sha256 = "0v3bim0j375z81zrpr5qv42knqs0y2qv2vkjiqi5axvb78slki1a"; + }; + } + + { + goPackagePath = "gopkg.in/yaml.v2"; + fetch = { + type = "git"; + url = "https://gopkg.in/yaml.v2"; + rev = "eb3733d160e7"; + sha256 = "1srhvcaa9db3a6xj29mkjr5kg33y71pclrlx4vcwz5m1lgb5c7q6"; + }; + } +] diff --git a/pkgs/development/tools/gron/default.nix b/pkgs/development/tools/gron/default.nix index 14c8f53a3944..ebe76197ef4e 100644 --- a/pkgs/development/tools/gron/default.nix +++ b/pkgs/development/tools/gron/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "gron-${version}"; - version = "0.5.2"; + version = "0.6.0"; owner = "tomnomnom"; repo = "gron"; @@ -11,7 +11,7 @@ buildGoPackage rec { src = fetchFromGitHub { inherit owner repo; rev = "v${version}"; - sha256 = "0nxcvih8n5a4f0a53dxaipab5ckqxgnsznzymhfw5kv4inr9v6j6"; + sha256 = "05f3w4zr15wd7xk75l12y5kip4gnv719a2x9w2hy23q3pnss9wk0"; }; goDeps = ./deps.nix; diff --git a/pkgs/development/tools/gron/deps.nix b/pkgs/development/tools/gron/deps.nix index c5b1feb888ae..effc255d877e 100644 --- a/pkgs/development/tools/gron/deps.nix +++ b/pkgs/development/tools/gron/deps.nix @@ -6,8 +6,8 @@ fetch = { type = "git"; url = "https://github.com/${owner}/${repo}"; - rev = "v1.6.0"; - sha256 = "0k1v9dkhrxiqhg48yqkwzpd7x40xx38gv2pgknswbsy4r8w644i7"; + rev = "v1.7.0"; + sha256 = "0v8msvg38r8d1iiq2i5r4xyfx0invhc941kjrsg5gzwvagv55inv"; }; } rec { @@ -32,4 +32,26 @@ sha256 = "001i6n71ghp2l6kdl3qq1v2vmghcz3kicv9a5wgcihrzigm75pp5"; }; } + rec { + owner = "mattn"; + repo = "go-colorable"; + goPackagePath = "github.com/${owner}/${repo}"; + fetch = { + type = "git"; + url = "https://github.com/${owner}/${repo}"; + rev = "v0.0.9"; + sha256 = "1nwjmsppsjicr7anq8na6md7b1z84l9ppnlr045hhxjvbkqwalvx"; + }; + } + rec { + owner = "mattn"; + repo = "go-isatty"; + goPackagePath = "github.com/${owner}/${repo}"; + fetch = { + type = "git"; + url = "https://github.com/${owner}/${repo}"; + rev = "v0.0.4"; + sha256 = "0zs92j2cqaw9j8qx1sdxpv3ap0rgbs0vrvi72m40mg8aa36gd39w"; + }; + } ] diff --git a/pkgs/development/tools/iferr/default.nix b/pkgs/development/tools/iferr/default.nix new file mode 100644 index 000000000000..e2aebe9b2dc2 --- /dev/null +++ b/pkgs/development/tools/iferr/default.nix @@ -0,0 +1,28 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "iferr-unstable-${version}"; + version = "2018-06-15"; + rev = "bb332a3b1d9129b6486c7ddcb7030c11b05cfc88"; + + goPackagePath = "github.com/koron/iferr"; + + src = fetchFromGitHub { + inherit rev; + + owner = "koron"; + repo = "iferr"; + sha256 = "1nyqy1sgq2afiama4wy7wap8s03c0hiwwa0f6kwq3y59097rfc0c"; + }; + + meta = with lib; { + description = ''Generate "if err != nil {" block''; + homepage = https://github.com/koron/iferr; + license = licenses.mit; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/impl/default.nix b/pkgs/development/tools/impl/default.nix new file mode 100644 index 000000000000..69bbf8afe5ac --- /dev/null +++ b/pkgs/development/tools/impl/default.nix @@ -0,0 +1,30 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "impl-unstable-${version}"; + version = "2018-02-27"; + rev = "3d0f908298c49598b6aa84f101c69670e15d1d03"; + + goPackagePath = "github.com/josharian/impl"; + + src = fetchFromGitHub { + inherit rev; + + owner = "josharian"; + repo = "impl"; + sha256 = "0xpip20x5vclrl0by1760lg73v6lj6nmkbiazlskyvpkw44h8a7c"; + }; + + goDeps = ./deps.nix; + + meta = with lib; { + description = "impl generates method stubs for implementing an interface."; + homepage = https://github.com/josharian/impl; + license = licenses.mit; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/impl/deps.nix b/pkgs/development/tools/impl/deps.nix new file mode 100644 index 000000000000..3477aaed6075 --- /dev/null +++ b/pkgs/development/tools/impl/deps.nix @@ -0,0 +1,11 @@ +[ + { + goPackagePath = "golang.org/x/tools"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/tools"; + rev = "96e9e165b75e735822645eff82850b08c377be36"; + sha256 = "1zj9ck5sg9b0pphxybmvxf64hhcap7v7j37fx3v5aknf18crjjdg"; + }; + } +] diff --git a/pkgs/development/tools/ineffassign/default.nix b/pkgs/development/tools/ineffassign/default.nix new file mode 100644 index 000000000000..10e5c61025ab --- /dev/null +++ b/pkgs/development/tools/ineffassign/default.nix @@ -0,0 +1,29 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "ineffassign-unstable-${version}"; + version = "2018-09-09"; + rev = "1003c8bd00dc2869cb5ca5282e6ce33834fed514"; + + goPackagePath = "github.com/gordonklaus/ineffassign"; + excludedPackages = ''testdata''; + + src = fetchFromGitHub { + inherit rev; + + owner = "gordonklaus"; + repo = "ineffassign"; + sha256 = "1rkzqvd3z03vq8q8qi9cghvgggsf02ammj9wq8jvpnx6b2sd16nd"; + }; + + meta = with lib; { + description = "Detect ineffectual assignments in Go code."; + homepage = https://github.com/gordonklaus/ineffassign; + license = licenses.mit; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/interfacer/default.nix b/pkgs/development/tools/interfacer/default.nix new file mode 100644 index 000000000000..274ced0b37cd --- /dev/null +++ b/pkgs/development/tools/interfacer/default.nix @@ -0,0 +1,31 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "interfacer-unstable-${version}"; + version = "2018-08-31"; + rev = "c20040233aedb03da82d460eca6130fcd91c629a"; + + goPackagePath = "mvdan.cc/interfacer"; + excludedPackages = ''check/testdata''; + + src = fetchFromGitHub { + inherit rev; + + owner = "mvdan"; + repo = "interfacer"; + sha256 = "0cx4m74mvn200360pmsqxx4z0apk9fcknwwqh8r94zd3jfv4akq2"; + }; + + goDeps = ./deps.nix; + + meta = with lib; { + description = "A linter that suggests interface types."; + homepage = https://github.com/mvdan/interfacer; + license = licenses.bsd3; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/interfacer/deps.nix b/pkgs/development/tools/interfacer/deps.nix new file mode 100644 index 000000000000..6810950878be --- /dev/null +++ b/pkgs/development/tools/interfacer/deps.nix @@ -0,0 +1,29 @@ +[ + { + goPackagePath = "github.com/kisielk/gotool"; + fetch = { + type = "git"; + url = "https://github.com/kisielk/gotool"; + rev = "80517062f582ea3340cd4baf70e86d539ae7d84d"; + sha256 = "14af2pa0ssyp8bp2mvdw184s5wcysk6akil3wzxmr05wwy951iwn"; + }; + } + { + goPackagePath = "golang.org/x/tools"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/tools"; + rev = "96e9e165b75e735822645eff82850b08c377be36"; + sha256 = "1zj9ck5sg9b0pphxybmvxf64hhcap7v7j37fx3v5aknf18crjjdg"; + }; + } + { + goPackagePath = "mvdan.cc/lint"; + fetch = { + type = "git"; + url = "https://github.com/mvdan/lint"; + rev = "adc824a0674b99099789b6188a058d485eaf61c0"; + sha256 = "17mi2rvkg9kzv1shxcyawzcj4jj3v738d1j82fp4yygx859yvr8r"; + }; + } +] diff --git a/pkgs/development/tools/jq/darwin-strptime-test.patch b/pkgs/development/tools/jq/darwin-strptime-test.patch deleted file mode 100644 index 4ea83fc164a3..000000000000 --- a/pkgs/development/tools/jq/darwin-strptime-test.patch +++ /dev/null @@ -1,16 +0,0 @@ -diff --git a/tests/jq.test b/tests/jq.test -index 4a4018b..f5aa7d5 100644 ---- a/src/tests/jq.test -+++ b/src/tests/jq.test -@@ -1144,9 +1144,9 @@ bsearch(4) - [1,2,3] - -4 - --[strptime("%Y-%m-%dT%H:%M:%SZ")|(.,mktime)] -+[strptime("%Y-%m-%dT%H:%M:%SZ")|mktime] - "2015-03-05T23:51:47Z" --[[2015,2,5,23,51,47,4,63],1425599507] -+[1425599507] - - strftime("%Y-%m-%dT%H:%M:%SZ") - [2015,2,5,23,51,47,4,63] diff --git a/pkgs/development/tools/jq/default.nix b/pkgs/development/tools/jq/default.nix index 712ec64bd416..b7b2b5066b9f 100644 --- a/pkgs/development/tools/jq/default.nix +++ b/pkgs/development/tools/jq/default.nix @@ -2,33 +2,17 @@ stdenv.mkDerivation rec { name = "jq-${version}"; - version="1.5"; + version="1.6"; src = fetchurl { url="https://github.com/stedolan/jq/releases/download/jq-${version}/jq-${version}.tar.gz"; - sha256="0g29kyz4ykasdcrb0zmbrp2jqs9kv1wz9swx849i2d1ncknbzln4"; + sha256="1a76f46a652i2g333kfvrl6mp2w7whf6h1yly519izg4y967h9cn"; }; outputs = [ "bin" "doc" "man" "dev" "lib" "out" ]; buildInputs = [ oniguruma ]; - patches = [ - (fetchpatch { - name = "CVE-2015-8863.patch"; - url = https://github.com/stedolan/jq/commit/8eb1367ca44e772963e704a700ef72ae2e12babd.diff; - sha256 = "18bjanzvklfzlzzd690y88725l7iwl4f6wnr429na5pfmircbpvh"; - }) - (fetchpatch { - name = "CVE-2016-4074.patch"; - url = https://patch-diff.githubusercontent.com/raw/stedolan/jq/pull/1214.diff; - sha256 = "1w8bapnyp56di6p9casbfczfn8258rw0z16grydavdjddfm280l9"; - }) - ] - ++ stdenv.lib.optional stdenv.isDarwin ./darwin-strptime-test.patch; - - patchFlags = [ "-p2" ]; # `src` subdir was introduced after v1.5 was released - configureFlags = [ "--bindir=\${bin}/bin" diff --git a/pkgs/development/tools/maligned/default.nix b/pkgs/development/tools/maligned/default.nix new file mode 100644 index 000000000000..7e5cbaddd8b3 --- /dev/null +++ b/pkgs/development/tools/maligned/default.nix @@ -0,0 +1,30 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "maligned-unstable-${version}"; + version = "2018-07-07"; + rev = "6e39bd26a8c8b58c5a22129593044655a9e25959"; + + goPackagePath = "github.com/mdempsky/maligned"; + + src = fetchFromGitHub { + inherit rev; + + owner = "mdempsky"; + repo = "maligned"; + sha256 = "08inr5xjqv9flrlyhqd8ck1q26y5xb6iilz0xkb6bqa4dl5ialhi"; + }; + + goDeps = ./deps.nix; + + meta = with lib; { + description = "Tool to detect Go structs that would take less memory if their fields were sorted."; + homepage = https://github.com/mdempsky/maligned; + license = licenses.bsd3; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/maligned/deps.nix b/pkgs/development/tools/maligned/deps.nix new file mode 100644 index 000000000000..afe5e50e47bd --- /dev/null +++ b/pkgs/development/tools/maligned/deps.nix @@ -0,0 +1,20 @@ +[ + { + goPackagePath = "github.com/kisielk/gotool"; + fetch = { + type = "git"; + url = "https://github.com/kisielk/gotool"; + rev = "80517062f582ea3340cd4baf70e86d539ae7d84d"; + sha256 = "14af2pa0ssyp8bp2mvdw184s5wcysk6akil3wzxmr05wwy951iwn"; + }; + } + { + goPackagePath = "golang.org/x/tools"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/tools"; + rev = "96e9e165b75e735822645eff82850b08c377be36"; + sha256 = "1zj9ck5sg9b0pphxybmvxf64hhcap7v7j37fx3v5aknf18crjjdg"; + }; + } +] diff --git a/pkgs/development/tools/misc/blackmagic/default.nix b/pkgs/development/tools/misc/blackmagic/default.nix index 2974c653acdd..281463528354 100644 --- a/pkgs/development/tools/misc/blackmagic/default.nix +++ b/pkgs/development/tools/misc/blackmagic/default.nix @@ -1,5 +1,5 @@ { stdenv, lib, fetchFromGitHub -, gcc-arm-embedded, libftdi +, gcc-arm-embedded, binutils-arm-embedded, libftdi , python, pythonPackages }: @@ -17,8 +17,11 @@ stdenv.mkDerivation rec { fetchSubmodules = true; }; + nativeBuildInputs = [ + gcc-arm-embedded binutils-arm-embedded + ]; + buildInputs = [ - gcc-arm-embedded libftdi python pythonPackages.intelhex diff --git a/pkgs/development/tools/misc/dfu-programmer/default.nix b/pkgs/development/tools/misc/dfu-programmer/default.nix index 1c0f80e1ddd7..ba95889b5a80 100644 --- a/pkgs/development/tools/misc/dfu-programmer/default.nix +++ b/pkgs/development/tools/misc/dfu-programmer/default.nix @@ -19,6 +19,6 @@ stdenv.mkDerivation rec { description = "A Device Firmware Update based USB programmer for Atmel chips with a USB bootloader"; homepage = http://dfu-programmer.sourceforge.net/; maintainers = [ maintainers.the-kenny ]; - platforms = platforms.linux; + platforms = platforms.unix; }; } diff --git a/pkgs/development/tools/misc/strace/default.nix b/pkgs/development/tools/misc/strace/default.nix index 33a46e16a3ab..e2022156870d 100644 --- a/pkgs/development/tools/misc/strace/default.nix +++ b/pkgs/development/tools/misc/strace/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "strace-${version}"; - version = "4.24"; + version = "4.25"; src = fetchurl { url = "https://strace.io/files/${version}/${name}.tar.xz"; - sha256 = "0d061cdzk6a1822ds4wpqxg10ny27mi4i9zjmnsbz8nz3vy5jkhz"; + sha256 = "00f7zagfh3np5gwi0z7hi7zjd7s5nixcaq7z78n87dvhakkgi1fn"; }; depsBuildBuild = [ buildPackages.stdenv.cc ]; diff --git a/pkgs/development/tools/misc/teensy-loader-cli/default.nix b/pkgs/development/tools/misc/teensy-loader-cli/default.nix index d6c5256ca84d..91f2a5c58fc2 100644 --- a/pkgs/development/tools/misc/teensy-loader-cli/default.nix +++ b/pkgs/development/tools/misc/teensy-loader-cli/default.nix @@ -10,7 +10,7 @@ stdenv.mkDerivation { sha256 = "1a663bv3lvm7bsf2wcaj2c0vpmniak7w5hwix5qgz608bvm2v781"; }; - buildInputs = [ unzip libusb ]; + buildInputs = [ libusb ]; installPhase = '' install -Dm755 teensy_loader_cli $out/bin/teensy-loader-cli @@ -21,6 +21,6 @@ stdenv.mkDerivation { description = "Firmware uploader for the Teensy microcontroller boards"; homepage = https://www.pjrc.com/teensy/; maintainers = with maintainers; [ the-kenny ]; - platforms = platforms.linux; + platforms = platforms.unix; }; } diff --git a/pkgs/development/tools/nrpl/default.nix b/pkgs/development/tools/nrpl/default.nix index d6a357235902..234f5a5bfae7 100644 --- a/pkgs/development/tools/nrpl/default.nix +++ b/pkgs/development/tools/nrpl/default.nix @@ -25,7 +25,10 @@ stdenv.mkDerivation rec { "-lpcre" ]; - buildPhase = "nim c -d:release nrpl.nim"; + buildPhase = '' + HOME=$TMPDIR + nim c -d:release nrpl.nim + ''; installPhase = "install -Dt $out/bin nrpl"; diff --git a/pkgs/development/tools/ocaml/merlin/default.nix b/pkgs/development/tools/ocaml/merlin/default.nix index d74b480c9c5a..c15970d3f3e6 100644 --- a/pkgs/development/tools/ocaml/merlin/default.nix +++ b/pkgs/development/tools/ocaml/merlin/default.nix @@ -3,7 +3,7 @@ assert stdenv.lib.versionAtLeast ocaml.version "4.02"; let - version = "3.2.1"; + version = "3.2.2"; in stdenv.mkDerivation { @@ -12,7 +12,7 @@ stdenv.mkDerivation { src = fetchzip { url = "https://github.com/ocaml/merlin/archive/v${version}.tar.gz"; - sha256 = "1szv2b7d12ll5n6pvnhlv3a6vnlyrkpya4l9fiyyiwyvgd4xzxwf"; + sha256 = "15ssgmwdxylbwhld9p1cq8x6kadxyhll5bfyf11dddj6cldna3hb"; }; buildInputs = [ ocaml findlib dune yojson ]; diff --git a/pkgs/development/tools/pyre/default.nix b/pkgs/development/tools/pyre/default.nix index 99e53610c01c..382e733cb98b 100644 --- a/pkgs/development/tools/pyre/default.nix +++ b/pkgs/development/tools/pyre/default.nix @@ -1,9 +1,15 @@ { stdenv, fetchFromGitHub, ocamlPackages, makeWrapper, writeScript -, dune, python3, rsync, fetchpatch }: +, dune, python3, rsync, fetchpatch, buck }: let # Manually set version - the setup script requires # hg and git + keeping the .git directory around. - pyre-version = "0.0.14"; + pyre-version = "0.0.17"; # also change typeshed revision below with $pyre-src/.typeshed-version + pyre-src = fetchFromGitHub { + owner = "facebook"; + repo = "pyre-check"; + rev = "v${pyre-version}"; + sha256 = "0y86a3g5xbgh0byksyx5jw7yq7w840x85dhz9inz6mkg5j06mcis"; + }; versionFile = writeScript "version.ml" '' cat > "./version.ml" <<EOF open Core @@ -20,12 +26,7 @@ let pyre-bin = stdenv.mkDerivation { name = "pyre-${pyre-version}"; - src = fetchFromGitHub { - owner = "facebook"; - repo = "pyre-check"; - rev = "v${pyre-version}"; - sha256 = "0c8xzaa3ljqb6llr041sydw0l4xqn7x21nw9vaymdxh35nx9bp2v"; - }; + src = pyre-src; nativeBuildInputs = [ makeWrapper ]; @@ -49,7 +50,6 @@ let export HOME=. # "external" because https://github.com/facebook/pyre-check/pull/8/files - cp Makefile.template Makefile sed "s/%VERSION%/external/" dune.in > dune cp ${versionFile} ./scripts/generate-version-number.sh @@ -77,20 +77,18 @@ let description = "A performant type-checker for Python 3"; homepage = https://pyre-check.org; license = licenses.mit; - platforms = with platforms; linux; + platforms = ocamlPackages.ocaml.meta.platforms; maintainers = with maintainers; [ teh ]; }; }; typeshed = stdenv.mkDerivation { name = "typeshed"; - # typeshed doesn't have versions, it seems to be synchronized with - # mypy relases. I'm assigning a random version here (same as pyre). version = pyre-version; src = fetchFromGitHub { owner = "python"; repo = "typeshed"; - rev = "a08c6ea"; - sha256 = "0wy8yh43vhyyc4g7iqnmlj66kz5in02y5qc0c4jdckhpa3mchaqk"; + rev = "bc3f9fe1d3c43b00c04cedb23e0eeebc9e1734b6"; + sha256 = "06b2kj4n49h4sgi8hn5kalmir8llhanfdc7f1924cxvrkj5ry94b"; }; phases = [ "unpackPhase" "installPhase" ]; installPhase = "cp -r $src $out"; @@ -98,19 +96,8 @@ typeshed = stdenv.mkDerivation { in python3.pkgs.buildPythonApplication rec { pname = "pyre-check"; version = pyre-version; - src = fetchFromGitHub { - owner = "facebook"; - repo = "pyre-check"; - rev = "v${pyre-version}"; - sha256 = "0ig7bx2kfn2kbxw74wysh5365yp5gyby42l9l29iclrzdghgk32l"; - }; - patches = [ - (fetchpatch { - url = "https://github.com/facebook/pyre-check/commit/b473d2ed9fc11e7c1cd0c7b8c42f521e5cdc2003.patch"; - sha256 = "05xvyp7j4n6z92bxf64rxfq5pvaadxgx1c8c5qziy75vdz72lkcy"; - }) - ./pyre-bdist-wheel.patch - ]; + src = pyre-src; + patches = [ ./pyre-bdist-wheel.patch ]; # The build-pypi-package script does some funky stuff with build # directories - easier to patch it a bit than to replace it @@ -119,15 +106,21 @@ in python3.pkgs.buildPythonApplication rec { mkdir ./build substituteInPlace scripts/build-pypi-package.sh \ --replace 'NIX_BINARY_FILE' '${pyre-bin}/bin/pyre.bin' \ - --replace 'BUILD_ROOT="$(mktemp -d)"' "BUILD_ROOT=$(pwd)/build" + --replace 'BUILD_ROOT="$(mktemp -d)"' "BUILD_ROOT=$PWD/build" + substituteInPlace client/buck.py \ + --replace '"buck"' '"${buck}/bin/buck"' + substituteInPlace client/tests/buck_test.py \ + --replace '"buck"' '"${buck}/bin/buck"' ''; - buildInputs = [ pyre-bin rsync ]; + buildInputs = [ pyre-bin ]; + nativeBuildInputs = [ rsync ]; # only required for build-pypi-package.sh propagatedBuildInputs = with python3.pkgs; [ docutils typeshed ]; buildPhase = '' bash scripts/build-pypi-package.sh --version ${pyre-version} --bundle-typeshed ${typeshed} cp -r build/dist dist ''; - - doCheck = false; # can't open file 'nix_run_setup': + checkPhase = '' + bash scripts/run-python-tests.sh + ''; } diff --git a/pkgs/development/tools/reftools/default.nix b/pkgs/development/tools/reftools/default.nix new file mode 100644 index 000000000000..6ef724022e8c --- /dev/null +++ b/pkgs/development/tools/reftools/default.nix @@ -0,0 +1,29 @@ +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "reftools-unstable-${version}"; + version = "2018-09-14"; + rev = "654d0ba4f96d62286ca33cd46f7674b84f76d399"; + + goPackagePath = "github.com/davidrjenni/reftools"; + excludedPackages = "\\(cmd/fillswitch/test-fixtures\\)"; + + src = fetchFromGitHub { + inherit rev; + + owner = "davidrjenni"; + repo = "reftools"; + sha256 = "12y2h1h15xadc8pa3xsj11hpdxz5dss6k7xaa4h1ifkvnasjp5w2"; + }; + + meta = with lib; { + description = "reftools - refactoring tools for Go"; + homepage = https://github.com/davidrjenni/reftools; + license = licenses.bsd2; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/rust/cargo-asm/default.nix b/pkgs/development/tools/rust/cargo-asm/default.nix index ca793bf49080..246f5b18843c 100644 --- a/pkgs/development/tools/rust/cargo-asm/default.nix +++ b/pkgs/development/tools/rust/cargo-asm/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, rustPlatform }: +{ stdenv, fetchFromGitHub, rustPlatform, Security }: rustPlatform.buildRustPackage rec { name = "cargo-asm-${version}"; @@ -13,6 +13,8 @@ rustPlatform.buildRustPackage rec { cargoSha256 = "1m2j6i8hc8isdlj77gv9m6sk6q0x3bvzpva2k16g27i1ngy1989b"; + buildInputs = stdenv.lib.optional stdenv.isDarwin Security; + # Test checks against machine code output, which fails with some # LLVM/compiler versions. doCheck = false; diff --git a/pkgs/development/tools/rust/pyo3-pack/default.nix b/pkgs/development/tools/rust/pyo3-pack/default.nix new file mode 100644 index 000000000000..05c57e46b893 --- /dev/null +++ b/pkgs/development/tools/rust/pyo3-pack/default.nix @@ -0,0 +1,35 @@ +{ stdenv, fetchFromGitHub, rustPlatform, dbus, gmp, openssl, pkgconfig +, darwin }: + +let + inherit (darwin.apple_sdk.frameworks) Security; +in rustPlatform.buildRustPackage rec { + name = "pyo3-pack-${version}"; + version = "0.3.8"; + + src = fetchFromGitHub { + owner = "PyO3"; + repo = "pyo3-pack"; + rev = "v${version}"; + sha256 = "14343209w7wphkqh7pnw08pah09spjbwhk6l548g9ivra057gwaz"; + }; + + cargoSha256 = "0n7z9p3v92ijqc2ix60wi74as5rql61k5qbqi8b1b02b71xmsp7j"; + + nativeBuildInputs = [ pkgconfig ]; + + buildInputs = [ gmp openssl ] + ++ stdenv.lib.optional stdenv.isDarwin Security + ++ stdenv.lib.optional stdenv.isLinux dbus; + + # Requires network access, fails in sandbox. + doCheck = false; + + meta = with stdenv.lib; { + description = "Build and publish crates with pyo3 bindings as python packages"; + homepage = https://github.com/PyO3/pyo3-pack; + license = licenses.mit; + maintainers = [ maintainers.danieldk ]; + platforms = platforms.all; + }; +} diff --git a/pkgs/development/tools/simavr/default.nix b/pkgs/development/tools/simavr/default.nix index b009d5ed601b..e28aad40ef47 100644 --- a/pkgs/development/tools/simavr/default.nix +++ b/pkgs/development/tools/simavr/default.nix @@ -1,4 +1,5 @@ -{ stdenv, fetchFromGitHub, avrbinutils, avrgcc, avrlibc, libelf, which, git, pkgconfig, freeglut +{ stdenv, fetchFromGitHub, libelf, which, git, pkgconfig, freeglut +, avrbinutils, avrgcc, avrlibc , libGLU_combined }: stdenv.mkDerivation rec { @@ -15,14 +16,10 @@ stdenv.mkDerivation rec { # ld: cannot find -lsimavr enableParallelBuilding = false; - preConfigure = '' - substituteInPlace Makefile.common --replace "-I../simavr/sim/avr -I../../simavr/sim/avr" \ - "-I${avrlibc}/avr/include -L${avrlibc}/avr/lib/avr5 -B${avrlibc}/avr/lib -I../simavr/sim/avr -I../../simavr/sim/avr" - ''; buildFlags = "AVR_ROOT=${avrlibc}/avr SIMAVR_VERSION=${version}"; installFlags = buildFlags + " DESTDIR=$(out)"; - + # Hack to avoid TMPDIR in RPATHs. preFixup = ''rm -rf "$(pwd)" && mkdir "$(pwd)" ''; @@ -31,8 +28,8 @@ stdenv.mkDerivation rec { patchelf --set-rpath "$(patchelf --print-rpath "$target"):$out/lib" "$target" ''; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ which git avrbinutils avrgcc avrlibc libelf freeglut libGLU_combined ]; + nativeBuildInputs = [ which git pkgconfig avrgcc avrbinutils ]; + buildInputs = [ libelf freeglut libGLU_combined ]; meta = with stdenv.lib; { description = "A lean and mean Atmel AVR simulator"; @@ -43,4 +40,3 @@ stdenv.mkDerivation rec { }; } - diff --git a/pkgs/development/tools/sourcetrail/default.nix b/pkgs/development/tools/sourcetrail/default.nix new file mode 100644 index 000000000000..2182f8697aab --- /dev/null +++ b/pkgs/development/tools/sourcetrail/default.nix @@ -0,0 +1,75 @@ +{ stdenv, fetchurl, autoPatchelfHook +, icu, zlib, expat, dbus, libheimdal, openssl}: + +stdenv.mkDerivation rec { + name = "sourcetrail-${version}"; + version = "2018.3.55"; + + src = fetchurl { + name = "sourtrail.tar.gz"; + url = "https://www.sourcetrail.com/downloads/${version}/linux/64bit"; + sha256 = "6f5fbbecc221e7165ecbf1c4d208e302dade4feea9d43eb3265521efc0a376e2"; + }; + + nativeBuildInputs = [ autoPatchelfHook ]; + buildInputs = [ zlib expat dbus stdenv.cc.cc openssl ]; + + installPhase = '' + runHook preInstall + + mkdir -p $out/bin $out/opt + + mv -v setup/share $out + mv -v data/gui/icon/logo_1024_1024.png $out/share/icons/sourcetrail.png + mv -v data/gui/icon/project_256_256.png $out/share/icons/project-sourcetrail.png + + mkdir -p $out/share/sourcetrail/doc + mv -v README EULA.txt $out/share/sourcetrail/doc + mv -v plugin $out/share/sourcetrail + + cp -rv . $out/opt + + rm $out/opt/lib/libssl.so + rm $out/opt/lib/platforms/{libqeglfs.so,libqwebgl.so} + ln -s ${openssl}/lib/libssl.so $out/opt/lib/libssl.so + + substituteInPlace \ + $out/share/applications/sourcetrail.desktop \ + --replace /usr/bin/ $out/bin/ + + cat <<EOF > $out/bin/sourcetrail + #! ${stdenv.shell} -e + + # XXX: Sourcetrail somehow copies the initial config files into the home + # directory without write permissions. We currently just copy them + # ourselves to work around this problem. + setup_config() { + local src dst + + [ ! -d ~/.config/sourcetrail ] && mkdir -p ~/.config/sourcetrail + for src in $out/opt/data/fallback/*; do + dst=~/.config/sourcetrail/"\$(basename "\$src")" + if [ ! -e "\$dst" ]; then + cp -r "\$src" "\$dst" + fi + done + + chmod -R u+w ~/.config/sourcetrail + } + + [ -d "\$HOME" ] && setup_config + exec "$out/opt/Sourcetrail.sh" "\$@" + EOF + chmod +x $out/bin/sourcetrail + + runHook postInstall + ''; + + meta = with stdenv.lib; { + homepage = https://www.sourcetrail.com; + description = "A cross-platform source explorer for C/C++ and Java"; + platforms = [ "x86_64-linux" ]; + license = licenses.unfree; + maintainers = with maintainers; [ midchildan ]; + }; +} diff --git a/pkgs/development/tools/unconvert/default.nix b/pkgs/development/tools/unconvert/default.nix new file mode 100644 index 000000000000..1e81c5b9f86e --- /dev/null +++ b/pkgs/development/tools/unconvert/default.nix @@ -0,0 +1,31 @@ + +{ buildGoPackage +, lib +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "unconvert-unstable-${version}"; + version = "2018-07-03"; + rev = "1a9a0a0a3594e9363e49545fb6a4e24ac4c68b7b"; + + goPackagePath = "github.com/mdempsky/unconvert"; + + src = fetchFromGitHub { + inherit rev; + + owner = "mdempsky"; + repo = "unconvert"; + sha256 = "1ww5qk1cmdis4ig5mb0b0w7nzrf3734s51plmgdxqsr35y88q4p9"; + }; + + goDeps = ./deps.nix; + + meta = with lib; { + description = "Remove unnecessary type conversions from Go source"; + homepage = https://github.com/mdempsky/unconvert; + license = licenses.bsd3; + maintainers = with maintainers; [ kalbasit ]; + platforms = platforms.linux ++ platforms.darwin; + }; +} diff --git a/pkgs/development/tools/unconvert/deps.nix b/pkgs/development/tools/unconvert/deps.nix new file mode 100644 index 000000000000..333ec7ca3b15 --- /dev/null +++ b/pkgs/development/tools/unconvert/deps.nix @@ -0,0 +1,29 @@ +[ + { + goPackagePath = "github.com/kisielk/gotool"; + fetch = { + type = "git"; + url = "https://github.com/kisielk/gotool"; + rev = "80517062f582ea3340cd4baf70e86d539ae7d84d"; + sha256 = "14af2pa0ssyp8bp2mvdw184s5wcysk6akil3wzxmr05wwy951iwn"; + }; + } + { + goPackagePath = "golang.org/x/text"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/text"; + rev = "6f44c5a2ea40ee3593d98cdcc905cc1fdaa660e2"; + sha256 = "00mwzxly5isgf0glz7k3k2dkyqkjfc4z55qxajx4lgcp3h8xn9xj"; + }; + } + { + goPackagePath = "golang.org/x/tools"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/tools"; + rev = "96e9e165b75e735822645eff82850b08c377be36"; + sha256 = "1zj9ck5sg9b0pphxybmvxf64hhcap7v7j37fx3v5aknf18crjjdg"; + }; + } +] diff --git a/pkgs/development/tools/yarn/default.nix b/pkgs/development/tools/yarn/default.nix index 47a11e1b7f4d..be2b0689f925 100644 --- a/pkgs/development/tools/yarn/default.nix +++ b/pkgs/development/tools/yarn/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "yarn-${version}"; - version = "1.10.1"; + version = "1.12.1"; src = fetchzip { url = "https://github.com/yarnpkg/yarn/releases/download/v${version}/yarn-v${version}.tar.gz"; - sha256 = "0j9y53k0wxgwjvvpbs6rr4nbydg3bn4khcxsrnzyrakym0ihgmr1"; + sha256 = "084xci8y5na2765sh8flc8c5z7fik62filf1p58aqrb2000vna1j"; }; buildInputs = [ nodejs ]; diff --git a/pkgs/development/web/mailcatcher/default.nix b/pkgs/development/web/mailcatcher/default.nix index 49c5c4d81af1..a2fa509232de 100644 --- a/pkgs/development/web/mailcatcher/default.nix +++ b/pkgs/development/web/mailcatcher/default.nix @@ -1,29 +1,11 @@ -{ stdenv, bundlerEnv, ruby, makeWrapper }: +{ lib, bundlerApp }: -stdenv.mkDerivation rec { - name = "mailcatcher-${version}"; +bundlerApp { + pname = "mailcatcher"; + gemdir = ./.; + exes = [ "mailcatcher" "catchmail" ]; - version = (import ./gemset.nix).mailcatcher.version; - - env = bundlerEnv { - name = "${name}-gems"; - - inherit ruby; - - gemdir = ./.; - }; - - buildInputs = [ makeWrapper ]; - - unpackPhase = ":"; - - installPhase = '' - mkdir -p $out/bin - makeWrapper ${env}/bin/mailcatcher $out/bin/mailcatcher - makeWrapper ${env}/bin/catchmail $out/bin/catchmail - ''; - - meta = with stdenv.lib; { + meta = with lib; { description = "SMTP server and web interface to locally test outbound emails"; homepage = https://mailcatcher.me/; license = licenses.mit; diff --git a/pkgs/games/dwarf-fortress/wrapper/default.nix b/pkgs/games/dwarf-fortress/wrapper/default.nix index 058bb5f72ae6..c1e81bf2b3ac 100644 --- a/pkgs/games/dwarf-fortress/wrapper/default.nix +++ b/pkgs/games/dwarf-fortress/wrapper/default.nix @@ -33,7 +33,7 @@ let ++ lib.optional enableTWBT twbt.art ++ [ dwarf-fortress ]; - fixup = lib.singleton (runCommand "fixup" {} '' + fixup = lib.singleton (runCommand "fixup" {} ('' mkdir -p $out/data/init cp ${dwarf-fortress}/data/init/init.txt $out/data/init/init.txt '' + lib.optionalString enableDFHack '' @@ -60,7 +60,7 @@ let --replace '[INTRO:YES]' '[INTRO:${unBool enableIntro}]' \ --replace '[TRUETYPE:YES]' '[TRUETYPE:${unBool enableTruetype}]' \ --replace '[FPS:NO]' '[FPS:${unBool enableFPS}]' - ''); + '')); env = buildEnv { name = "dwarf-fortress-env-${dwarf-fortress.dfVersion}"; diff --git a/pkgs/games/flightgear/default.nix b/pkgs/games/flightgear/default.nix index b7a4af54929d..f3b77d87e179 100644 --- a/pkgs/games/flightgear/default.nix +++ b/pkgs/games/flightgear/default.nix @@ -6,14 +6,14 @@ }: let - version = "2017.3.1"; - shortVersion = "2017.3"; + version = "2018.2.2"; + shortVersion = "2018.2"; data = stdenv.mkDerivation rec { name = "flightgear-base-${version}"; src = fetchurl { url = "mirror://sourceforge/flightgear/release-${shortVersion}/FlightGear-${version}-data.tar.bz2"; - sha256 = "166q0fsbp17lx1l1n6i8cfk3d1i79pasz1liya09z6m2i1pb026z"; + sha256 = "c89b94e4cf3cb7eda728daf6cca6dd051f7a47863776c99fd2f3fe0054400ac4"; }; phases = [ "installPhase" ]; @@ -31,7 +31,7 @@ stdenv.mkDerivation rec { src = fetchurl { url = "mirror://sourceforge/flightgear/release-${shortVersion}/${name}.tar.bz2"; - sha256 = "1kccf91vmxnzyki6grx09s10dvr4j6qrz34ikj7jn81g5scisbkg"; + sha256 = "61f809ef0a3f6908d156f0c483ed5313d31b5a6ac74761955d0b266751718147"; }; # Of all the files in the source and data archives, there doesn't seem to be diff --git a/pkgs/games/gemrb/default.nix b/pkgs/games/gemrb/default.nix index 0e9025259224..fc7bf7168ddf 100644 --- a/pkgs/games/gemrb/default.nix +++ b/pkgs/games/gemrb/default.nix @@ -1,5 +1,6 @@ { stdenv, fetchFromGitHub, cmake -, freetype, SDL2, SDL2_mixer, openal, zlib, libpng, python, libvorbis }: +, freetype, SDL2, SDL2_mixer, openal, zlib, libpng, python, libvorbis +, libiconv }: stdenv.mkDerivation rec { name = "gemrb-${version}"; @@ -13,7 +14,7 @@ stdenv.mkDerivation rec { }; # TODO: make libpng, libvorbis, sdl_mixer, freetype, vlc, glew (and other gl reqs) optional - buildInputs = [ freetype python openal SDL2 SDL2_mixer zlib libpng libvorbis ]; + buildInputs = [ freetype python openal SDL2 SDL2_mixer zlib libpng libvorbis libiconv ]; nativeBuildInputs = [ cmake ]; diff --git a/pkgs/games/speed-dreams/default.nix b/pkgs/games/speed-dreams/default.nix index 4bf03fec9de9..5f6e20c39b6b 100644 --- a/pkgs/games/speed-dreams/default.nix +++ b/pkgs/games/speed-dreams/default.nix @@ -35,6 +35,12 @@ stdenv.mkDerivation rec { tar -xf ${wip-cars-and-tracks} ''; + prePatch = '' + # https://sourceforge.net/p/speed-dreams/mailman/message/35665539/ + sed -i "s|lastSlash = '\\\0'|lastSlash = NULL|" src/libs/tgf/params.cpp + sed -i "s|const char\* error = '\\\0'|const char\* error = NULL|" src/libs/tgfclient/openalmusicplayer.cpp + ''; + preBuild = '' make -C src/libs/portability make -C src/libs/portability portability.o diff --git a/pkgs/games/steam/runtime-generated.nix b/pkgs/games/steam/runtime-generated.nix index 694274053bfe..ac24f0c15a53 100644 --- a/pkgs/games/steam/runtime-generated.nix +++ b/pkgs/games/steam/runtime-generated.nix @@ -4,1746 +4,1737 @@ { amd64 = [ rec { - name = "dconf-gsettings-backend_0.12.0-0ubuntu1.1+srt4_amd64"; - sha256 = "03yfjxzsyf14zqwxb43piyh78xxap7yxh5f4gx649qv28h7ygfrm"; - url = "mirror://steamrt/pool/main/d/d-conf/dconf-gsettings-backend_0.12.0-0ubuntu1.1+srt4_amd64.deb"; + name = "dconf-gsettings-backend_0.12.0-0ubuntu1.1+srt5_amd64"; + sha256 = "074vbkdxaylb36ljkxz586jfcn7ghxzfivyiz703li1dw54jaq87"; + url = "mirror://steamrt/pool/main/d/d-conf/dconf-gsettings-backend_0.12.0-0ubuntu1.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "dconf-gsettings-backend.deb"; }; } rec { - name = "freeglut3_2.6.0-1ubuntu3+srt4_amd64"; - sha256 = "1wi5fad0f7nqps55isvbb42njqssbhyzmd38q8413afjyhmm6icc"; - url = "mirror://steamrt/pool/main/f/freeglut/freeglut3_2.6.0-1ubuntu3+srt4_amd64.deb"; + name = "freeglut3_2.6.0-1ubuntu3+srt5_amd64"; + sha256 = "08mpxxd12c2kwlab47nfz25vpn7ag2xkmxp2zn48ymxab7qhvr5r"; + url = "mirror://steamrt/pool/main/f/freeglut/freeglut3_2.6.0-1ubuntu3+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "freeglut3.deb"; }; } rec { - name = "gcc-4.6-base_4.6.3-1ubuntu5+srt4_amd64"; - sha256 = "1za8f7wkwcww4wacydqq3fvi5p1ivgcr2n3npirqir1gr25cbxaj"; - url = "mirror://steamrt/pool/main/g/gcc-4.6/gcc-4.6-base_4.6.3-1ubuntu5+srt4_amd64.deb"; + name = "gcc-4.6-base_4.6.3-1ubuntu5+steamrt1.1+srt1_amd64"; + sha256 = "1iknyb54mn8l1gcm9pg47hlra7y5x9awrgd431hzvig44c34vv9m"; + url = "mirror://steamrt/pool/main/g/gcc-4.6/gcc-4.6-base_4.6.3-1ubuntu5+steamrt1.1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "gcc-4.6-base.deb"; }; } rec { - name = "gtk2-engines_2.20.2-1ubuntu1+srt4_amd64"; - sha256 = "03y4239swznwlgdx6yc58sj6w5irqq7432hxcmcw8608m3w0m29h"; - url = "mirror://steamrt/pool/main/g/gtk2-engines/gtk2-engines_2.20.2-1ubuntu1+srt4_amd64.deb"; + name = "gtk2-engines_2.20.2-1ubuntu1+srt5_amd64"; + sha256 = "1w2aaddcrfg37fw7bl2jcbx14bp7ar8lyaq25j9pi8298wvbikly"; + url = "mirror://steamrt/pool/main/g/gtk2-engines/gtk2-engines_2.20.2-1ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "gtk2-engines.deb"; }; } rec { - name = "gtk2-engines-murrine_0.98.2-0ubuntu1+srt4_amd64"; - sha256 = "1iwmgzkdxjvr2q2kz5bjz64r4qjqbcf6ynz3sy5y81dl254pjnmh"; - url = "mirror://steamrt/pool/main/g/gtk2-engines-murrine/gtk2-engines-murrine_0.98.2-0ubuntu1+srt4_amd64.deb"; + name = "gtk2-engines-murrine_0.98.2-0ubuntu1+srt5_amd64"; + sha256 = "0fqbm6502zqw64lbzywz0cllxkj9n44fxb2gg8q160vcqzyvb8jf"; + url = "mirror://steamrt/pool/main/g/gtk2-engines-murrine/gtk2-engines-murrine_0.98.2-0ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "gtk2-engines-murrine.deb"; }; } rec { - name = "gtk2-engines-pixbuf_2.24.10-0ubuntu6+steamrt1+srt4_amd64"; - sha256 = "0md5vjz8wnayppcxkl5x7874w2z4w7pjz96gprv24hid4azmyci8"; - url = "mirror://steamrt/pool/main/g/gtk+2.0/gtk2-engines-pixbuf_2.24.10-0ubuntu6+steamrt1+srt4_amd64.deb"; + name = "gtk2-engines-pixbuf_2.24.10-0ubuntu6+steamrt1+srt5_amd64"; + sha256 = "05d43583lj3ffskvmzcr6yb8a3jz1l8gc12mrmaix8w71bv81nr1"; + url = "mirror://steamrt/pool/main/g/gtk+2.0/gtk2-engines-pixbuf_2.24.10-0ubuntu6+steamrt1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "gtk2-engines-pixbuf.deb"; }; } rec { - name = "libacl1_2.2.51-5ubuntu1+srt6_amd64"; - sha256 = "02xwrfzspf58j9lr6b128jq1klkvd4b69lrclpqzwm9cqddg6mr5"; - url = "mirror://steamrt/pool/main/a/acl/libacl1_2.2.51-5ubuntu1+srt6_amd64.deb"; + name = "libacl1_2.2.51-5ubuntu1+srt7_amd64"; + sha256 = "199r529wahl2947iwnwf4qazv6jqipsjaj2dqvplacmm197rsvdc"; + url = "mirror://steamrt/pool/main/a/acl/libacl1_2.2.51-5ubuntu1+srt7_amd64.deb"; source = fetchurl { inherit url sha256; name = "libacl1.deb"; }; } rec { - name = "libappindicator1_0.4.92-0ubuntu1+steamrt1+srt5_amd64"; - sha256 = "08m1w5mhzl613gbjg6lvf7wcm7bs00xddaaci8f1944icl8pdibb"; - url = "mirror://steamrt/pool/main/liba/libappindicator/libappindicator1_0.4.92-0ubuntu1+steamrt1+srt5_amd64.deb"; + name = "libappindicator1_0.4.92-0ubuntu1.1+steamrt1+srt1_amd64"; + sha256 = "19s3s3fc4vcj5cg7fh40w35vjyhi7097vv83lwjzrzhz5jlgczmp"; + url = "mirror://steamrt/pool/main/liba/libappindicator/libappindicator1_0.4.92-0ubuntu1.1+steamrt1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libappindicator1.deb"; }; } rec { - name = "libasn1-8-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64"; - sha256 = "0m69ar6w3lzsggn79lyc3614p9rr2dy29vwqvl4w3gmshp6aqhs4"; - url = "mirror://steamrt/pool/main/h/heimdal/libasn1-8-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64.deb"; + name = "libasn1-8-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64"; + sha256 = "0mib9hy38mbiz40dr7x7c9c0liqswmnnykij7xpp7kbfqlvlshb8"; + url = "mirror://steamrt/pool/main/h/heimdal/libasn1-8-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libasn1-8-heimdal.deb"; }; } rec { - name = "libasound2_1.1.0-0ubuntu1+steamos1+srt1_amd64"; - sha256 = "1bh911nx5a2abn38h9sa90ji358r6is2n7ymm10v94yibdf63rwg"; - url = "mirror://steamrt/pool/main/a/alsa-lib/libasound2_1.1.0-0ubuntu1+steamos1+srt1_amd64.deb"; + name = "libasound2_1.1.0-0ubuntu1+steamos1+srt2_amd64"; + sha256 = "05d4ijlc20ss4rm2jxr5lxkgwbn0qcv5a7pj9aizl66klpbzsgay"; + url = "mirror://steamrt/pool/main/a/alsa-lib/libasound2_1.1.0-0ubuntu1+steamos1+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libasound2.deb"; }; } rec { - name = "libasound2-plugins_1.1.0-0ubuntu1+srt1_amd64"; - sha256 = "1l36hxgnml9pglrihm17vkgqp3jpqslicg1mpycixzz9cpgfyxbz"; - url = "mirror://steamrt/pool/main/a/alsa-plugins/libasound2-plugins_1.1.0-0ubuntu1+srt1_amd64.deb"; + name = "libasound2-plugins_1.1.0-0ubuntu1+srt2_amd64"; + sha256 = "1dsa9z7ssf39c039a60axh36wgykyapv65gmlxnvxpkhqnw4zywm"; + url = "mirror://steamrt/pool/main/a/alsa-plugins/libasound2-plugins_1.1.0-0ubuntu1+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libasound2-plugins.deb"; }; } rec { - name = "libasyncns0_0.8-4+srt4_amd64"; - sha256 = "154bh8mpslr4xwf54h1xds4v2yjf8rbyvv1lc0azl9gnkan1y0an"; - url = "mirror://steamrt/pool/main/liba/libasyncns/libasyncns0_0.8-4+srt4_amd64.deb"; + name = "libasyncns0_0.8-4+srt5_amd64"; + sha256 = "00nglm7sryy3y1pagjhv1mq6rvqiawmhf3kgwv0g7bqwgxcpia7p"; + url = "mirror://steamrt/pool/main/liba/libasyncns/libasyncns0_0.8-4+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libasyncns0.deb"; }; } rec { - name = "libatk1.0-0_2.4.0-0ubuntu1+srt4_amd64"; - sha256 = "0kky7mfkx38lj4gafrv886z0vbf17xnpymq6qas59x8f35bzx742"; - url = "mirror://steamrt/pool/main/a/atk1.0/libatk1.0-0_2.4.0-0ubuntu1+srt4_amd64.deb"; + name = "libatk1.0-0_2.18.0-1+steamrt1+srt1_amd64"; + sha256 = "1rs9k9pcxmpwlwbxgalsqhiv7baqylaxpkhy4524a4b8dw1qx0k4"; + url = "mirror://steamrt/pool/main/a/atk1.0/libatk1.0-0_2.18.0-1+steamrt1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libatk1.0-0.deb"; }; } rec { - name = "libattr1_2.4.46-5ubuntu1+srt4_amd64"; - sha256 = "11hn8q45pddm4khq0qp1qj19c1syfawscnvrl6cv1xmahpb3nm3i"; - url = "mirror://steamrt/pool/main/a/attr/libattr1_2.4.46-5ubuntu1+srt4_amd64.deb"; + name = "libattr1_2.4.46-5ubuntu1+steamrt1+srt1_amd64"; + sha256 = "1d7xlyz5phsgka2psf6hwa393lgmlyjl3cd7a8dbzs9862h5f2v8"; + url = "mirror://steamrt/pool/main/a/attr/libattr1_2.4.46-5ubuntu1+steamrt1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libattr1.deb"; }; } rec { - name = "libavahi-client3_0.6.30-5ubuntu2+srt4_amd64"; - sha256 = "0yrgvh80i1gpcq2w64hkqnmiymgrn7r2v67wyd1iijc2zyb4x0c3"; - url = "mirror://steamrt/pool/main/a/avahi/libavahi-client3_0.6.30-5ubuntu2+srt4_amd64.deb"; + name = "libavahi-client3_0.6.30-5ubuntu2.2+srt1_amd64"; + sha256 = "04rkaiapl13rxlr2bwxz2q7z6i0091nm1c49kjnl1yckg64d7548"; + url = "mirror://steamrt/pool/main/a/avahi/libavahi-client3_0.6.30-5ubuntu2.2+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libavahi-client3.deb"; }; } rec { - name = "libavahi-common3_0.6.30-5ubuntu2+srt4_amd64"; - sha256 = "1r1rqpqdqmqxn3g1iifc77jgrhfkr5275s7d5h3p1hvkmlzyvwd2"; - url = "mirror://steamrt/pool/main/a/avahi/libavahi-common3_0.6.30-5ubuntu2+srt4_amd64.deb"; + name = "libavahi-common3_0.6.30-5ubuntu2.2+srt1_amd64"; + sha256 = "1a2x57s3072na65gr7ys0wl5cm2f1j2m5kkhlhq4i8ms6hxssgrk"; + url = "mirror://steamrt/pool/main/a/avahi/libavahi-common3_0.6.30-5ubuntu2.2+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libavahi-common3.deb"; }; } rec { - name = "libavcodec53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_amd64"; - sha256 = "09fwqr29dxhxkkf1gd9f9sph2jgv0qx3p7k6qxxwq3bg4lh2971n"; - url = "mirror://steamrt/pool/main/liba/libav/libavcodec53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_amd64.deb"; + name = "libavcodec53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_amd64"; + sha256 = "0wpmnsnq5njv65iwq2g6819m2j5fda7jm8450qs3lmyc963ds0i2"; + url = "mirror://steamrt/pool/main/liba/libav/libavcodec53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libavcodec53.deb"; }; } rec { - name = "libavfilter2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_amd64"; - sha256 = "0fynn6g6mc4raj144hg9r7qbiz7b2s4p7aidjpy34xkbxcn2vq45"; - url = "mirror://steamrt/pool/main/liba/libav/libavfilter2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_amd64.deb"; + name = "libavfilter2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_amd64"; + sha256 = "1xpxmhhhgc7ap7f2ijlsgx9p58qqyvk2lgfn61dhlibq046px816"; + url = "mirror://steamrt/pool/main/liba/libav/libavfilter2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libavfilter2.deb"; }; } rec { - name = "libavformat53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_amd64"; - sha256 = "0qdfr19xfxwab9q5w4bvwgv873cs8zgm4s10hwg6741xr6qifnhg"; - url = "mirror://steamrt/pool/main/liba/libav/libavformat53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_amd64.deb"; + name = "libavformat53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_amd64"; + sha256 = "0b8vx5lhsbynivm58zhxd0w6g7c7bqjvsr891wbqizbi325yja2b"; + url = "mirror://steamrt/pool/main/liba/libav/libavformat53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libavformat53.deb"; }; } rec { - name = "libavutil51_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_amd64"; - sha256 = "0pfgxnrf1jjlb7gvwklwn7m61n591yfzqfzzqb76gyr20r6v6dzw"; - url = "mirror://steamrt/pool/main/liba/libav/libavutil51_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_amd64.deb"; + name = "libavutil51_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_amd64"; + sha256 = "1g3bdnfs0rgwnzrnwpj5hamynj1z0qs8wmxlfd0iqkah74ymgaaa"; + url = "mirror://steamrt/pool/main/liba/libav/libavutil51_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libavutil51.deb"; }; } rec { - name = "libbz2-1.0_1.0.6-1+srt4_amd64"; - sha256 = "13rsp2cyayvnh2755kjbs6g6j85rdpl6cwlx22b97hid5pq5nk60"; - url = "mirror://steamrt/pool/main/b/bzip2/libbz2-1.0_1.0.6-1+srt4_amd64.deb"; + name = "libbz2-1.0_1.0.6-1+srt5_amd64"; + sha256 = "046y04ynczpydlrablks51mx4jc1313k89hsi8x4sj2a355819nz"; + url = "mirror://steamrt/pool/main/b/bzip2/libbz2-1.0_1.0.6-1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libbz2-1.0.deb"; }; } rec { - name = "libcairo2_1.10.2-6.1ubuntu3+srt4_amd64"; - sha256 = "0iv16gfc1b8n4p088jbask9i8i56agip8dd5b1r22r52hg28gi9y"; - url = "mirror://steamrt/pool/main/c/cairo/libcairo2_1.10.2-6.1ubuntu3+srt4_amd64.deb"; + name = "libcairo2_1.10.2-6.1ubuntu3+srt5_amd64"; + sha256 = "1j82gzl9hfxsrk2s3nxx1dpq6jlmkz5y5mkvxw9d166v0mlvxkq4"; + url = "mirror://steamrt/pool/main/c/cairo/libcairo2_1.10.2-6.1ubuntu3+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libcairo2.deb"; }; } rec { - name = "libcanberra-gtk-module_0.28-3ubuntu3+steamrt1+srt4_amd64"; - sha256 = "19gl25hjzxw375qqbckmgfr14qd48zaccnny4zbddlz8aj5w4wig"; - url = "mirror://steamrt/pool/main/libc/libcanberra/libcanberra-gtk-module_0.28-3ubuntu3+steamrt1+srt4_amd64.deb"; + name = "libcanberra-gtk-module_0.28-3ubuntu3+steamrt1+srt5_amd64"; + sha256 = "1x36zmsb7wcmgli75sfqamw5gmsv47if56f1vljjgak3jn2vlmm2"; + url = "mirror://steamrt/pool/main/libc/libcanberra/libcanberra-gtk-module_0.28-3ubuntu3+steamrt1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libcanberra-gtk-module.deb"; }; } rec { - name = "libcanberra-gtk0_0.28-3ubuntu3+steamrt1+srt4_amd64"; - sha256 = "1kgq90l6rafqk7zfxafvzkh8msys5mlc95qr3rcv6l0f03w785dy"; - url = "mirror://steamrt/pool/main/libc/libcanberra/libcanberra-gtk0_0.28-3ubuntu3+steamrt1+srt4_amd64.deb"; + name = "libcanberra-gtk0_0.28-3ubuntu3+steamrt1+srt5_amd64"; + sha256 = "0g68j9w3xn0vnjgznq2avmzk8rykas0a6749ldq99yq9afccjfcp"; + url = "mirror://steamrt/pool/main/libc/libcanberra/libcanberra-gtk0_0.28-3ubuntu3+steamrt1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libcanberra-gtk0.deb"; }; } rec { - name = "libcanberra0_0.28-3ubuntu3+steamrt1+srt4_amd64"; - sha256 = "01x6y4gq1ivpdywglx418gr4m56qvm05nicmavwimnafxga3c5sk"; - url = "mirror://steamrt/pool/main/libc/libcanberra/libcanberra0_0.28-3ubuntu3+steamrt1+srt4_amd64.deb"; + name = "libcanberra0_0.28-3ubuntu3+steamrt1+srt5_amd64"; + sha256 = "0qzyjrr5nmc72pfbalh9s22s51c5c10f0h23viyjrk77kk0ysc3f"; + url = "mirror://steamrt/pool/main/libc/libcanberra/libcanberra0_0.28-3ubuntu3+steamrt1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libcanberra0.deb"; }; } rec { - name = "libcap2_2.22-1ubuntu3+srt4_amd64"; - sha256 = "1rhfhq1n45fq40p6c2aipkica2dw8w95w7bsdrxfby48gdppgzy7"; - url = "mirror://steamrt/pool/main/libc/libcap2/libcap2_2.22-1ubuntu3+srt4_amd64.deb"; + name = "libcap2_2.22-1ubuntu3+srt5_amd64"; + sha256 = "0bsjpbv2p7ir6w7dpjvs8y25skha72406mhgjrff9dvdvc9mwwpy"; + url = "mirror://steamrt/pool/main/libc/libcap2/libcap2_2.22-1ubuntu3+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libcap2.deb"; }; } rec { - name = "libcg_3.0.0016-0ubuntu1+srt4_amd64"; - sha256 = "0yifiwr2hc7rvvd6snf530gma05v2qpiyl652drdc9rvcfjrj9zi"; - url = "mirror://steamrt/pool/main/n/nvidia-cg-toolkit/libcg_3.0.0016-0ubuntu1+srt4_amd64.deb"; + name = "libcg_3.0.0016-0ubuntu1+srt5_amd64"; + sha256 = "1d4lc4krkphvmlvmd4z60l6cg37gd62x9m700s83jxbsz0fhwmrb"; + url = "mirror://steamrt/pool/main/n/nvidia-cg-toolkit/libcg_3.0.0016-0ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libcg.deb"; }; } rec { - name = "libcomerr2_1.42-1ubuntu2.2+srt1_amd64"; - sha256 = "1cll5iwdply1lz211j83n22aidsxfx2jvy09a02qa79a7g1qv6c3"; - url = "mirror://steamrt/pool/main/e/e2fsprogs/libcomerr2_1.42-1ubuntu2.2+srt1_amd64.deb"; + name = "libcomerr2_1.42-1ubuntu2.3+srt1_amd64"; + sha256 = "0ar9lzaxlmhqxpp6v2b3jz3lblkqhqwy0ywbwkdq4zs5za69kh1b"; + url = "mirror://steamrt/pool/main/e/e2fsprogs/libcomerr2_1.42-1ubuntu2.3+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libcomerr2.deb"; }; } rec { - name = "libcups2_1.5.3-0ubuntu8.2+steamrt1+srt3_amd64"; - sha256 = "1xaxim0df5713hj4kq141rnf51zvyhvpv015q4q41c3nh4d9bz7w"; - url = "mirror://steamrt/pool/main/c/cups/libcups2_1.5.3-0ubuntu8.2+steamrt1+srt3_amd64.deb"; + name = "libcups2_1.5.3-0ubuntu8.2+steamrt1+srt4_amd64"; + sha256 = "12ihcwb2qlkms5si1sz7an61ndhxqhd2dxrx9likm07bz2c9mq9b"; + url = "mirror://steamrt/pool/main/c/cups/libcups2_1.5.3-0ubuntu8.2+steamrt1+srt4_amd64.deb"; source = fetchurl { inherit url sha256; name = "libcups2.deb"; }; } rec { - name = "libcurl3_7.22.0-3ubuntu4.8+steamrt2+srt5_amd64"; - sha256 = "0vwdpkiisnbrm1j22qzjj2g5vsiv4wdja3j34j16pc30088f4c3i"; - url = "mirror://steamrt/pool/main/c/curl/libcurl3_7.22.0-3ubuntu4.8+steamrt2+srt5_amd64.deb"; + name = "libcurl3_7.22.0-3ubuntu4.17+srt1_amd64"; + sha256 = "1nzbxzrkqnnzhml2fyjzpaifsm3whq78bxjqnhs9ljs3jwhl59p5"; + url = "mirror://steamrt/pool/main/c/curl/libcurl3_7.22.0-3ubuntu4.17+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libcurl3.deb"; }; } rec { - name = "libcurl3-gnutls_7.22.0-3ubuntu4.8+steamrt2+srt5_amd64"; - sha256 = "0rvrjcxpmnbq42aq6x31gxxglwiccm059r2q78hqiw82i86b7j28"; - url = "mirror://steamrt/pool/main/c/curl/libcurl3-gnutls_7.22.0-3ubuntu4.8+steamrt2+srt5_amd64.deb"; + name = "libcurl3-gnutls_7.22.0-3ubuntu4.17+srt1_amd64"; + sha256 = "0mgxy0vninsv7yi3wiqjkdz8ap52y4zlkzxwyijcvbwkxp33rq68"; + url = "mirror://steamrt/pool/main/c/curl/libcurl3-gnutls_7.22.0-3ubuntu4.17+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libcurl3-gnutls.deb"; }; } rec { - name = "libdbus-1-3_1.4.18-1ubuntu1.7+srt1_amd64"; - sha256 = "1nkzsi04m1icwb3b1nky15d0frnc0hpfsyrm3xx1hriv02iqwgvw"; - url = "mirror://steamrt/pool/main/d/dbus/libdbus-1-3_1.4.18-1ubuntu1.7+srt1_amd64.deb"; + name = "libdbus-1-3_1.4.18-1ubuntu1.8+srt1_amd64"; + sha256 = "1m1q2q2s6b98x1zbk31hnd80dakfqg2g8yaj662vxrdrr85j6nza"; + url = "mirror://steamrt/pool/main/d/dbus/libdbus-1-3_1.4.18-1ubuntu1.8+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libdbus-1-3.deb"; }; } rec { - name = "libdbus-glib-1-2_0.98-1ubuntu1.1+srt4_amd64"; - sha256 = "19xnslykd4y22ff5mfs2rg4rjppmcrmrbwynzx4v2rvxckvvq77f"; - url = "mirror://steamrt/pool/main/d/dbus-glib/libdbus-glib-1-2_0.98-1ubuntu1.1+srt4_amd64.deb"; + name = "libdbus-glib-1-2_0.98-1ubuntu1.1+srt5_amd64"; + sha256 = "1f36vyq505hrfqmhizgplvvk17zhf1230wlrzibdwi04j275sahk"; + url = "mirror://steamrt/pool/main/d/dbus-glib/libdbus-glib-1-2_0.98-1ubuntu1.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libdbus-glib-1-2.deb"; }; } rec { - name = "libdbusmenu-glib4_0.6.2-0ubuntu0.1+srt4_amd64"; - sha256 = "1x1szx7m6y6i0d6ahffnrdhs693rk4wi4hrhbmmn2g1sizr9qhmb"; - url = "mirror://steamrt/pool/main/libd/libdbusmenu/libdbusmenu-glib4_0.6.2-0ubuntu0.1+srt4_amd64.deb"; + name = "libdbusmenu-glib4_0.6.2-0ubuntu0.1+srt5_amd64"; + sha256 = "064wwqbjrdvwkjpyi0k6vj7rrwkwcy49mrlsgrv3q4gckiqhjhbz"; + url = "mirror://steamrt/pool/main/libd/libdbusmenu/libdbusmenu-glib4_0.6.2-0ubuntu0.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libdbusmenu-glib4.deb"; }; } rec { - name = "libdbusmenu-gtk4_0.6.2-0ubuntu0.1+srt4_amd64"; - sha256 = "0nrydq0mjjsx1v9gk78j5xcgdaay5dhxn5rj9ydkbkw7ih4xm2m1"; - url = "mirror://steamrt/pool/main/libd/libdbusmenu/libdbusmenu-gtk4_0.6.2-0ubuntu0.1+srt4_amd64.deb"; + name = "libdbusmenu-gtk4_0.6.2-0ubuntu0.1+srt5_amd64"; + sha256 = "0vagal7jh6biarjf9sy219p2njb5k8ycv4v7glni8prli0c1zzxq"; + url = "mirror://steamrt/pool/main/libd/libdbusmenu/libdbusmenu-gtk4_0.6.2-0ubuntu0.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libdbusmenu-gtk4.deb"; }; } rec { - name = "libexif12_0.6.20-2ubuntu0.1+srt4_amd64"; - sha256 = "09pjkyjykvsmddx20ji4wgr5gnqbshj1hpm77129ini9qp61wxig"; - url = "mirror://steamrt/pool/main/libe/libexif/libexif12_0.6.20-2ubuntu0.1+srt4_amd64.deb"; + name = "libexif12_0.6.20-2ubuntu0.1+srt5_amd64"; + sha256 = "15rk2yfvsy16azpcwl8xsxigmrdhl0pkg6dvyq2pknp08c72r5r7"; + url = "mirror://steamrt/pool/main/libe/libexif/libexif12_0.6.20-2ubuntu0.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libexif12.deb"; }; } rec { - name = "libexpat1_2.0.1-7.2ubuntu1.2+srt1_amd64"; - sha256 = "0axky1v55yalkng9mn22ignmapv100gkcfb0xs82pllzaws32yhb"; - url = "mirror://steamrt/pool/main/e/expat/libexpat1_2.0.1-7.2ubuntu1.2+srt1_amd64.deb"; + name = "libexpat1_2.0.1-7.2ubuntu1.4+srt2_amd64"; + sha256 = "0pdn5f20pbmklnvsyl83x0rjafsjy8vxn4zd2nl7h0aabzng9vy2"; + url = "mirror://steamrt/pool/main/e/expat/libexpat1_2.0.1-7.2ubuntu1.4+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libexpat1.deb"; }; } rec { - name = "libffi6_3.0.11~rc1-5+srt4_amd64"; - sha256 = "1brqpwjbf6dd6crvs32b7q73m11anlq1s1r1m0p5cv17sc89q3q4"; - url = "mirror://steamrt/pool/main/libf/libffi/libffi6_3.0.11~rc1-5+srt4_amd64.deb"; + name = "libffi6_3.0.11~rc1-5+srt5_amd64"; + sha256 = "0i428a37s9lma09psy0d7vj2amnimwgx4izmmac4dlzyy6qpfn9s"; + url = "mirror://steamrt/pool/main/libf/libffi/libffi6_3.0.11~rc1-5+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libffi6.deb"; }; } rec { - name = "libflac8_1.2.1-6+srt4_amd64"; - sha256 = "1sdbbm4gdq0mw103z3nwhywvix1z21gdq6lc5xf4s12zpj1zq2gc"; - url = "mirror://steamrt/pool/main/f/flac/libflac8_1.2.1-6+srt4_amd64.deb"; + name = "libflac8_1.2.1-6+steamrt1.1ubuntu0.1+srt1_amd64"; + sha256 = "13hkikwbxsm3nf91rc1xa98apwx9y4mr9h20cd0206gm43qfyvh2"; + url = "mirror://steamrt/pool/main/f/flac/libflac8_1.2.1-6+steamrt1.1ubuntu0.1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libflac8.deb"; }; } rec { - name = "libfltk1.1_1.1.10-10+srt4_amd64"; - sha256 = "0x5xxxkkj7g5wyhxl1rv846irn3r8hh744fqyn8hgmbp4mdgils0"; - url = "mirror://steamrt/pool/main/f/fltk1.1/libfltk1.1_1.1.10-10+srt4_amd64.deb"; + name = "libfltk1.1_1.1.10-10+srt5_amd64"; + sha256 = "0zrx2mb5rl5hcyh6p0sglark6rh7s993sg26klizkswn2w53rv8j"; + url = "mirror://steamrt/pool/main/f/fltk1.1/libfltk1.1_1.1.10-10+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libfltk1.1.deb"; }; } rec { - name = "libfontconfig1_2.8.0-3ubuntu9.1+srt4_amd64"; - sha256 = "0mcdd9x8dc153sk2dqixxy4rxvl9hvc7dz0msfwiywrgbilzfbl4"; - url = "mirror://steamrt/pool/main/f/fontconfig/libfontconfig1_2.8.0-3ubuntu9.1+srt4_amd64.deb"; + name = "libfontconfig1_2.8.0-3ubuntu9.2+srt2_amd64"; + sha256 = "047sq7342mqvc84qx8dayf282yh84zdj4azqp1c0h4hczc73jwv9"; + url = "mirror://steamrt/pool/main/f/fontconfig/libfontconfig1_2.8.0-3ubuntu9.2+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libfontconfig1.deb"; }; } rec { - name = "libfreetype6_2.4.8-1ubuntu2.3+srt1_amd64"; - sha256 = "08x0fg01qbycdwdgqj3xal0fi676pnkkgsk0kbvxfg3i4ln944l1"; - url = "mirror://steamrt/pool/main/f/freetype/libfreetype6_2.4.8-1ubuntu2.3+srt1_amd64.deb"; + name = "libfreetype6_2.4.8-1ubuntu2.6+srt1_amd64"; + sha256 = "01z4dwib9d7i7187yw1b0vji587hrj354cz6ll2iybrbg25w510w"; + url = "mirror://steamrt/pool/main/f/freetype/libfreetype6_2.4.8-1ubuntu2.6+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libfreetype6.deb"; }; } rec { - name = "libgcc1_4.8.1-2ubuntu1~12.04+steamrt2+srt1_amd64"; - sha256 = "05pg02l16fj7fdv8gkx95jy4j4cikqwmdkyq65a8qf20in3qs04m"; - url = "mirror://steamrt/pool/main/g/gcc-4.8/libgcc1_4.8.1-2ubuntu1~12.04+steamrt2+srt1_amd64.deb"; + name = "libgcc1_5.4.0-7.really.6+steamrt1.1+srt1_amd64"; + sha256 = "1300z3mjxxcl718mjdfppv53s42ba88gm0izbfn6wqvrj7wrz5wq"; + url = "mirror://steamrt/pool/main/g/gcc-5/libgcc1_5.4.0-7.really.6+steamrt1.1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgcc1.deb"; }; } rec { - name = "libgconf-2-4_3.2.5-0ubuntu2+srt4_amd64"; - sha256 = "0mmgmnzyi9rlk7k6ir3f127brml366bbk7v5aq75y90z6qdp5h62"; - url = "mirror://steamrt/pool/main/g/gconf/libgconf-2-4_3.2.5-0ubuntu2+srt4_amd64.deb"; + name = "libgconf-2-4_3.2.5-0ubuntu2+srt5_amd64"; + sha256 = "163jbgkz66crkkjdqc0axj4sjfmd6kfkglwlk3d52rf3bc7mvimb"; + url = "mirror://steamrt/pool/main/g/gconf/libgconf-2-4_3.2.5-0ubuntu2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgconf-2-4.deb"; }; } rec { - name = "libgcrypt11_1.5.0-3ubuntu0.5+srt1_amd64"; - sha256 = "0qpxrm37js3pgi8hwcfqyqgkipypb0gw6nvsbz5dd112hmnpkp37"; - url = "mirror://steamrt/pool/main/libg/libgcrypt11/libgcrypt11_1.5.0-3ubuntu0.5+srt1_amd64.deb"; + name = "libgcrypt11_1.5.0-3ubuntu0.6+srt2_amd64"; + sha256 = "0p1vywfx5l9zhibr8c20by9w646przfjfaci5c6ifi7f4v5nn9hc"; + url = "mirror://steamrt/pool/main/libg/libgcrypt11/libgcrypt11_1.5.0-3ubuntu0.6+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgcrypt11.deb"; }; } rec { - name = "libgdk-pixbuf2.0-0_2.26.1-1+steamrt3+srt4_amd64"; - sha256 = "00kq05jzlrvd4gx8pz54k1i8sm9v8l07vih4if6wanr45ifsjqlp"; - url = "mirror://steamrt/pool/main/g/gdk-pixbuf/libgdk-pixbuf2.0-0_2.26.1-1+steamrt3+srt4_amd64.deb"; + name = "libgdk-pixbuf2.0-0_2.26.1-1+steamrt3+srt5_amd64"; + sha256 = "1km2w0haybwal9zkhwsrx4i9yi2zkhbbfhh2xljhfw5m5g6s4mq5"; + url = "mirror://steamrt/pool/main/g/gdk-pixbuf/libgdk-pixbuf2.0-0_2.26.1-1+steamrt3+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgdk-pixbuf2.0-0.deb"; }; } rec { - name = "libglew1.10_1.10.0-3+srt4_amd64"; - sha256 = "0ybry9jiyp0bgfm9b0bznf5qllyf7jc6avd8rcc20ai7yf719mwc"; - url = "mirror://steamrt/pool/main/g/glew/libglew1.10_1.10.0-3+srt4_amd64.deb"; + name = "libglew1.10_1.10.0-3+srt6_amd64"; + sha256 = "19w95wfzzr909jgjg8w6fqff8x00izawqicw896fqbf44zmsc2l0"; + url = "mirror://steamrt/pool/main/g/glew/libglew1.10_1.10.0-3+srt6_amd64.deb"; source = fetchurl { inherit url sha256; name = "libglew1.10.deb"; }; } rec { - name = "libglew1.6_1.6.0-4+srt4_amd64"; - sha256 = "1y4ywi4lp5df3nasxz8p5rmybl2vbv8bbww1s8alin5waidl7qav"; - url = "mirror://steamrt/pool/main/g/glew/libglew1.6_1.6.0-4+srt4_amd64.deb"; - source = fetchurl { - inherit url sha256; - name = "libglew1.6.deb"; - }; - } - rec { - name = "libglib2.0-0_2.32.3-0ubuntu1+steamrt2+srt4_amd64"; - sha256 = "1imdb4wyy7qndg8xmlrfnj0x3a6fg7dv0izn2rajp5q77ivry51v"; - url = "mirror://steamrt/pool/main/g/glib2.0/libglib2.0-0_2.32.3-0ubuntu1+steamrt2+srt4_amd64.deb"; + name = "libglib2.0-0_2.32.3-0ubuntu1+steamrt3+srt2_amd64"; + sha256 = "1zhb0cpyl3vq5hg63j7wgw6bmwrn8xnq1ybnbigw439c0nq4f333"; + url = "mirror://steamrt/pool/main/g/glib2.0/libglib2.0-0_2.32.3-0ubuntu1+steamrt3+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libglib2.0-0.deb"; }; } rec { - name = "libglu1-mesa_8.0.4-0ubuntu0.7+srt4_amd64"; - sha256 = "1bgks33ck18asizisa5d7wj4wsv8hxccpshl0f2ihdvs6qgxgs76"; - url = "mirror://steamrt/pool/main/m/mesa/libglu1-mesa_8.0.4-0ubuntu0.7+srt4_amd64.deb"; + name = "libglu1-mesa_8.0.4-0ubuntu0.7+srt5_amd64"; + sha256 = "02fywg8h5jlkrh1qiqd0hpjv4v1hxggm3vjhnfn5rdj3xxmbvr2y"; + url = "mirror://steamrt/pool/main/m/mesa/libglu1-mesa_8.0.4-0ubuntu0.7+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libglu1-mesa.deb"; }; } rec { - name = "libgmp10_5.0.2+dfsg-2ubuntu1+srt4_amd64"; - sha256 = "1la9938zrqrf8v4bcn5063xxxwwankhzh69m0sy8csixfg480c1a"; - url = "mirror://steamrt/pool/main/g/gmp/libgmp10_5.0.2+dfsg-2ubuntu1+srt4_amd64.deb"; + name = "libgmp10_5.0.2+dfsg-2ubuntu1+srt5_amd64"; + sha256 = "0vmx8ybnbf4rilylk1kxhq6c1z5wbxh77garwf79jm0jx3xamzrh"; + url = "mirror://steamrt/pool/main/g/gmp/libgmp10_5.0.2+dfsg-2ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgmp10.deb"; }; } rec { - name = "libgnutls26_2.12.14-5ubuntu3.11+srt1_amd64"; - sha256 = "1zrrprip93m9r2c7zd54pz8f5jvdgb0jir6ifvqbl60d521lfbl7"; - url = "mirror://steamrt/pool/main/g/gnutls26/libgnutls26_2.12.14-5ubuntu3.11+srt1_amd64.deb"; + name = "libgnutls26_2.12.14-5ubuntu3.14+srt1_amd64"; + sha256 = "19jl1ril1h2r66ilwi45j49g2ag9b4x5090ld0gqp4hbx6f67x9g"; + url = "mirror://steamrt/pool/main/g/gnutls26/libgnutls26_2.12.14-5ubuntu3.14+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgnutls26.deb"; }; } rec { - name = "libgomp1_4.8.1-2ubuntu1~12.04+steamrt2+srt1_amd64"; - sha256 = "094y3af19hg7s0hklh9slhmb19h2hhbfl4fpfpqcvbagkh6gwxl1"; - url = "mirror://steamrt/pool/main/g/gcc-4.8/libgomp1_4.8.1-2ubuntu1~12.04+steamrt2+srt1_amd64.deb"; + name = "libgomp1_5.4.0-7.really.6+steamrt1.1+srt1_amd64"; + sha256 = "06x5j6rvv5g8brsmgpxikjb9fs6gjpd31g2iw3b313k9c6fl7z9x"; + url = "mirror://steamrt/pool/main/g/gcc-5/libgomp1_5.4.0-7.really.6+steamrt1.1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgomp1.deb"; }; } rec { - name = "libgpg-error0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "0zw0zrl50y86y292zjcgpxiqjwyw0krnrmi28qvb0ba2ahp18f7v"; - url = "mirror://steamrt/pool/main/libg/libgpg-error/libgpg-error0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libgpg-error0_1.10-2ubuntu1+srt5_amd64"; + sha256 = "1pgv5svrqvsyiakqqnbb1ph6sk5yd6lgk53k2isyyz44vdjch9py"; + url = "mirror://steamrt/pool/main/libg/libgpg-error/libgpg-error0_1.10-2ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgpg-error0.deb"; }; } rec { - name = "libgssapi-krb5-2_1.10+dfsg~beta1-2ubuntu0.7+srt1_amd64"; - sha256 = "1mmd16fh58gnyyjwg9ac1br0xia670xc0ag65bfgxwnpfnkr7nyj"; - url = "mirror://steamrt/pool/main/k/krb5/libgssapi-krb5-2_1.10+dfsg~beta1-2ubuntu0.7+srt1_amd64.deb"; + name = "libgssapi-krb5-2_1.10+dfsg~beta1-2ubuntu0.7+srt2_amd64"; + sha256 = "1nv973s0h9vmnmslxyddd28p4yv8k47d685m8lxv1irc4skqxzzc"; + url = "mirror://steamrt/pool/main/k/krb5/libgssapi-krb5-2_1.10+dfsg~beta1-2ubuntu0.7+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgssapi-krb5-2.deb"; }; } rec { - name = "libgssapi3-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64"; - sha256 = "063k09yyr9mn0lacp29cgwagpiix220p7ahs5shpyigkjk5bp174"; - url = "mirror://steamrt/pool/main/h/heimdal/libgssapi3-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64.deb"; + name = "libgssapi3-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64"; + sha256 = "02h7fqwwg7jpz8b86dbjhh067ah34x3ys9n5df1rksbzpvmqcbiy"; + url = "mirror://steamrt/pool/main/h/heimdal/libgssapi3-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgssapi3-heimdal.deb"; }; } rec { - name = "libgstreamer-plugins-base0.10-0_0.10.36-1ubuntu0.1+srt4_amd64"; - sha256 = "0r60n1xym2alg4jr1icgzvd8x614p7vky0zxfvn8x9qd2hzr8k5q"; - url = "mirror://steamrt/pool/main/g/gst-plugins-base0.10/libgstreamer-plugins-base0.10-0_0.10.36-1ubuntu0.1+srt4_amd64.deb"; + name = "libgstreamer-plugins-base0.10-0_0.10.36-1ubuntu0.2+srt1_amd64"; + sha256 = "186hxj0jvgbxki0v6fx499pp796kcwiz86gqfhkd94k434aaqz1f"; + url = "mirror://steamrt/pool/main/g/gst-plugins-base0.10/libgstreamer-plugins-base0.10-0_0.10.36-1ubuntu0.2+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgstreamer-plugins-base0.10-0.deb"; }; } rec { - name = "libgstreamer0.10-0_0.10.36-1ubuntu1+srt4_amd64"; - sha256 = "0xynq7jgb0x8npb6apj58ag5zccl0gh4npyrfvs0ys4hzlv2fkmm"; - url = "mirror://steamrt/pool/main/g/gstreamer0.10/libgstreamer0.10-0_0.10.36-1ubuntu1+srt4_amd64.deb"; + name = "libgstreamer0.10-0_0.10.36-1ubuntu1+srt5_amd64"; + sha256 = "1ddfd661703jgd8xai2ysh2gdvf0pkbvg46iazlg5jqr17i1b1sx"; + url = "mirror://steamrt/pool/main/g/gstreamer0.10/libgstreamer0.10-0_0.10.36-1ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgstreamer0.10-0.deb"; }; } rec { - name = "libgtk2.0-0_2.24.10-0ubuntu6+steamrt1+srt4_amd64"; - sha256 = "0zbsr09xam3sl5qpnl34hgiir98g3rcfg2nblzwp8yr9kkrsb7zk"; - url = "mirror://steamrt/pool/main/g/gtk+2.0/libgtk2.0-0_2.24.10-0ubuntu6+steamrt1+srt4_amd64.deb"; + name = "libgtk2.0-0_2.24.10-0ubuntu6+steamrt1+srt5_amd64"; + sha256 = "1bb7yf3ld99a9amdb6r8slw7g3xnj72za2nbpsrm6cwlw9nyxli0"; + url = "mirror://steamrt/pool/main/g/gtk+2.0/libgtk2.0-0_2.24.10-0ubuntu6+steamrt1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgtk2.0-0.deb"; }; } rec { - name = "libgtk2.0-common_2.24.10-0ubuntu6+steamrt1+srt4_all"; - sha256 = "0xgh9nrvj1hf3wj9pqm9x3ykw95v9bsh5k2vgr3cr9135rrj0dp5"; - url = "mirror://steamrt/pool/main/g/gtk+2.0/libgtk2.0-common_2.24.10-0ubuntu6+steamrt1+srt4_all.deb"; + name = "libgtk2.0-common_2.24.10-0ubuntu6+steamrt1+srt5_all"; + sha256 = "0rw8iy16ij86abh444jk1xw78b5z81qjxm1292jin3sfhck4bd4x"; + url = "mirror://steamrt/pool/main/g/gtk+2.0/libgtk2.0-common_2.24.10-0ubuntu6+steamrt1+srt5_all.deb"; source = fetchurl { inherit url sha256; name = "libgtk2.0-common.deb"; }; } rec { - name = "libgudev-1.0-0_175-0ubuntu9.2+srt4_amd64"; - sha256 = "1bv962vi9x8m41ss6g73q91xlxhf1pd733wsywflllkxa5qyabpl"; - url = "mirror://steamrt/pool/main/u/udev/libgudev-1.0-0_175-0ubuntu9.2+srt4_amd64.deb"; + name = "libgudev-1.0-0_175-0ubuntu9.10+srt1_amd64"; + sha256 = "1i8k7y464zj3vb17kwim69kh57y9hnlx40xfs0hrfvjjlj3ih30w"; + url = "mirror://steamrt/pool/main/u/udev/libgudev-1.0-0_175-0ubuntu9.10+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libgudev-1.0-0.deb"; }; } rec { - name = "libhcrypto4-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64"; - sha256 = "1s67jx924c06arhf18dpqncphlih26a7frshzd4ndwzp8xp87xyc"; - url = "mirror://steamrt/pool/main/h/heimdal/libhcrypto4-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64.deb"; + name = "libhcrypto4-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64"; + sha256 = "1ihzd3ihylrbrwxqx8sam6lwkhkk2c9ys7vxah2yvj43fl8piiz8"; + url = "mirror://steamrt/pool/main/h/heimdal/libhcrypto4-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libhcrypto4-heimdal.deb"; }; } rec { - name = "libheimbase1-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64"; - sha256 = "0zchyajpd78rflfh4md3i0cvzd0gbkwf6l8kqcyavvib42mmdga8"; - url = "mirror://steamrt/pool/main/h/heimdal/libheimbase1-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64.deb"; + name = "libheimbase1-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64"; + sha256 = "1z4h6zdh5h9yvq4dfizy8ndskny94c86m5b4g9lpypfpzj259kpi"; + url = "mirror://steamrt/pool/main/h/heimdal/libheimbase1-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libheimbase1-heimdal.deb"; }; } rec { - name = "libheimntlm0-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64"; - sha256 = "0lz83zkg4f1rjhf0sigk09s4kbksm9j2lalf7k04bci1sxs2wj2y"; - url = "mirror://steamrt/pool/main/h/heimdal/libheimntlm0-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64.deb"; + name = "libheimntlm0-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64"; + sha256 = "13fgm887ycb1l5w1hxvlf906wr4k834drykg36ink6g9fi1smn79"; + url = "mirror://steamrt/pool/main/h/heimdal/libheimntlm0-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libheimntlm0-heimdal.deb"; }; } rec { - name = "libhx509-5-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64"; - sha256 = "0bcn57af9g4psxfiqqfsmfv7z3a713z86760lspgl63xfxlsm4d5"; - url = "mirror://steamrt/pool/main/h/heimdal/libhx509-5-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64.deb"; + name = "libhx509-5-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64"; + sha256 = "0alagksf7h181r86iiddvb9sil9zwf7d8lhnikq2x1i1ncxnwbj9"; + url = "mirror://steamrt/pool/main/h/heimdal/libhx509-5-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libhx509-5-heimdal.deb"; }; } rec { - name = "libice6_1.0.7-2build1+srt4_amd64"; - sha256 = "0lygkw0my7diasqyw7m5a0rfcpp38pb8jq7iqks195j21sy95h0s"; - url = "mirror://steamrt/pool/main/libi/libice/libice6_1.0.7-2build1+srt4_amd64.deb"; + name = "libice6_1.0.7-2build1+srt5_amd64"; + sha256 = "0v1a4dbs6by8n3yi23xqs4qqvjjdhh1qqmacc2bybjd2qi8dps8y"; + url = "mirror://steamrt/pool/main/libi/libice/libice6_1.0.7-2build1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libice6.deb"; }; } rec { - name = "libidn11_1.23-2+steamrt1+srt4_amd64"; - sha256 = "0530ygdsq840kmqm1mlqk19a7wxpvwgrbary2dpflzqvclx4gfr1"; - url = "mirror://steamrt/pool/main/libi/libidn/libidn11_1.23-2+steamrt1+srt4_amd64.deb"; + name = "libidn11_1.23-2+steamrt1+srt5_amd64"; + sha256 = "19s5pm1w8idc52hcj07fd52hw4fxl8hda9rm5gdbgginrl1naibp"; + url = "mirror://steamrt/pool/main/libi/libidn/libidn11_1.23-2+steamrt1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libidn11.deb"; }; } rec { - name = "libindicator7_0.5.0-0ubuntu1+srt4_amd64"; - sha256 = "0j89i9hgdh93a6m71ji3rrhlnyanjb7dbxy460shn38v4f3ax735"; - url = "mirror://steamrt/pool/main/libi/libindicator/libindicator7_0.5.0-0ubuntu1+srt4_amd64.deb"; + name = "libindicator7_0.5.0-0ubuntu1+steamrt1+srt1_amd64"; + sha256 = "0fcj1fmk70y8j1jcbr9dian2zrwf5m7yis4zpq8cc77838cdx0pg"; + url = "mirror://steamrt/pool/main/libi/libindicator/libindicator7_0.5.0-0ubuntu1+steamrt1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libindicator7.deb"; }; } rec { - name = "libjack-jackd2-0_1.9.8~dfsg.1-1ubuntu2+srt3_amd64"; - sha256 = "0l7h8z8fx0pqkbdh5x3v6azz6ddxdlzchgs97h5babrknkfkiar4"; - url = "mirror://steamrt/pool/main/j/jackd2/libjack-jackd2-0_1.9.8~dfsg.1-1ubuntu2+srt3_amd64.deb"; + name = "libjack-jackd2-0_1.9.8~dfsg.1-1ubuntu2+srt4_amd64"; + sha256 = "0qpipr1anfy4y6m1syznmarsh3ni6db9dc7a1w0n11zfhp8lpihg"; + url = "mirror://steamrt/pool/main/j/jackd2/libjack-jackd2-0_1.9.8~dfsg.1-1ubuntu2+srt4_amd64.deb"; source = fetchurl { inherit url sha256; name = "libjack-jackd2-0.deb"; }; } rec { - name = "libjpeg-turbo8_1.1.90+svn733-0ubuntu4.3+srt4_amd64"; - sha256 = "0z2df70v2ggw2la3yr4ll926wj6pc84li1x2bxwz9ysw7xsgalg0"; - url = "mirror://steamrt/pool/main/libj/libjpeg-turbo/libjpeg-turbo8_1.1.90+svn733-0ubuntu4.3+srt4_amd64.deb"; + name = "libjpeg-turbo8_1.1.90+svn733-0ubuntu4.3+srt5_amd64"; + sha256 = "10r393m5xxqjd6hpvlnfvnba081crhs88x1knhi3s6mhg2xhg35y"; + url = "mirror://steamrt/pool/main/libj/libjpeg-turbo/libjpeg-turbo8_1.1.90+svn733-0ubuntu4.3+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libjpeg-turbo8.deb"; }; } rec { - name = "libjpeg62_6b1-2ubuntu1.1+srt4_amd64"; - sha256 = "0n6qsfk42nhwvg8r9win7a90zvb31ba7cp7jvbbc4bhv7ygxxm7f"; - url = "mirror://steamrt/pool/main/libj/libjpeg6b/libjpeg62_6b1-2ubuntu1.1+srt4_amd64.deb"; + name = "libjpeg62_6b1-2ubuntu1.1+srt5_amd64"; + sha256 = "0wn9lgqc95gvck5k8qds9908j5ip3s3bz85a8l2bdprgg1q4rsrl"; + url = "mirror://steamrt/pool/main/libj/libjpeg6b/libjpeg62_6b1-2ubuntu1.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libjpeg62.deb"; }; } rec { - name = "libjson0_0.9-1ubuntu1.1+srt2_amd64"; - sha256 = "10r817kzxcviqvrajmi33pdbqss1qxpkmjxda7cclamnnawbcd17"; - url = "mirror://steamrt/pool/main/j/json-c/libjson0_0.9-1ubuntu1.1+srt2_amd64.deb"; + name = "libjson0_0.9-1ubuntu1.1+srt3_amd64"; + sha256 = "1pqncc63z9w3jg41xqklappyirajfrchdjp81bldrnmbpbj69xha"; + url = "mirror://steamrt/pool/main/j/json-c/libjson0_0.9-1ubuntu1.1+srt3_amd64.deb"; source = fetchurl { inherit url sha256; name = "libjson0.deb"; }; } rec { - name = "libk5crypto3_1.10+dfsg~beta1-2ubuntu0.7+srt1_amd64"; - sha256 = "1xsl1nwsm6r1gjfkl7x71h8p9qkq7gi624277cj3k68b31qh3g4z"; - url = "mirror://steamrt/pool/main/k/krb5/libk5crypto3_1.10+dfsg~beta1-2ubuntu0.7+srt1_amd64.deb"; + name = "libk5crypto3_1.10+dfsg~beta1-2ubuntu0.7+srt2_amd64"; + sha256 = "18xfi5c04s3z9brj1rrmvl9s67apd4d6ax7vfwwjzwh7ygnkp8h8"; + url = "mirror://steamrt/pool/main/k/krb5/libk5crypto3_1.10+dfsg~beta1-2ubuntu0.7+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libk5crypto3.deb"; }; } rec { - name = "libkeyutils1_1.5.2-2+srt4_amd64"; - sha256 = "0khwz7jqw9yq157r675sjii3bqk2i66dh6wn43b7vhh0wjz6nbdc"; - url = "mirror://steamrt/pool/main/k/keyutils/libkeyutils1_1.5.2-2+srt4_amd64.deb"; + name = "libkeyutils1_1.5.2-2+srt5_amd64"; + sha256 = "14mv4r05r0fzkbl3r4jaa7wwmmaprv3q5w36pyf3xqc3iynxnj2p"; + url = "mirror://steamrt/pool/main/k/keyutils/libkeyutils1_1.5.2-2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libkeyutils1.deb"; }; } rec { - name = "libkrb5-26-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64"; - sha256 = "0lfhwqsxpzaapz71rldi2zhsxkdy55krcmfbli06qs4mqx9mf691"; - url = "mirror://steamrt/pool/main/h/heimdal/libkrb5-26-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64.deb"; + name = "libkrb5-26-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64"; + sha256 = "0xhz42f7lnsc69sfnj2w0917jwm82nbc9i56qq3s1g2sw7z6kb3q"; + url = "mirror://steamrt/pool/main/h/heimdal/libkrb5-26-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libkrb5-26-heimdal.deb"; }; } rec { - name = "libkrb5-3_1.10+dfsg~beta1-2ubuntu0.7+srt1_amd64"; - sha256 = "0aqwf07c818apd5md4gxwzx67xvbvv8s6fm890vibqhsrmymi621"; - url = "mirror://steamrt/pool/main/k/krb5/libkrb5-3_1.10+dfsg~beta1-2ubuntu0.7+srt1_amd64.deb"; + name = "libkrb5-3_1.10+dfsg~beta1-2ubuntu0.7+srt2_amd64"; + sha256 = "1k3d1775ran10y79s7n5lmdlqlr7kscvxmj1887bnn4yxbwlgy73"; + url = "mirror://steamrt/pool/main/k/krb5/libkrb5-3_1.10+dfsg~beta1-2ubuntu0.7+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libkrb5-3.deb"; }; } rec { - name = "libkrb5support0_1.10+dfsg~beta1-2ubuntu0.7+srt1_amd64"; - sha256 = "04wacj307jcy8ykyq6w3xw9phmprmfz6cpwv1wyfarxf4gr7nyii"; - url = "mirror://steamrt/pool/main/k/krb5/libkrb5support0_1.10+dfsg~beta1-2ubuntu0.7+srt1_amd64.deb"; + name = "libkrb5support0_1.10+dfsg~beta1-2ubuntu0.7+srt2_amd64"; + sha256 = "1xml3gfn253lydqaqk27209sr1x0vvrbbkmb63z5cyy4i1yfpvmr"; + url = "mirror://steamrt/pool/main/k/krb5/libkrb5support0_1.10+dfsg~beta1-2ubuntu0.7+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libkrb5support0.deb"; }; } rec { - name = "liblcms2-2_2.2+git20110628-2ubuntu3.1+srt4_amd64"; - sha256 = "12kva7qrghlj65khzcmj6xqszij9186ly0iwjjqjs5xl5821aic4"; - url = "mirror://steamrt/pool/main/l/lcms2/liblcms2-2_2.2+git20110628-2ubuntu3.1+srt4_amd64.deb"; + name = "liblcms2-2_2.2+git20110628-2ubuntu3.1+srt5_amd64"; + sha256 = "0wj24yi2ws12lfs0pi0bq9rbr1gyk2nv30rf46bav41mpn2fj9mg"; + url = "mirror://steamrt/pool/main/l/lcms2/liblcms2-2_2.2+git20110628-2ubuntu3.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "liblcms2-2.deb"; }; } rec { - name = "libldap-2.4-2_2.4.28-1.1ubuntu4.2+steamrt1+srt4_amd64"; - sha256 = "1xnhh3s2cm4vjny964bsznnk2a6zj9n8ygkxfyrraib3wy61lidv"; - url = "mirror://steamrt/pool/main/o/openldap/libldap-2.4-2_2.4.28-1.1ubuntu4.2+steamrt1+srt4_amd64.deb"; + name = "libldap-2.4-2_2.4.28-1.1ubuntu4.2+steamrt1+srt5_amd64"; + sha256 = "1pakk71qcjdp28v5cbfvrkbknhjhnbkk7ywr6czarmhldipsyifp"; + url = "mirror://steamrt/pool/main/o/openldap/libldap-2.4-2_2.4.28-1.1ubuntu4.2+steamrt1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libldap-2.4-2.deb"; }; } rec { - name = "libltdl7_2.4.2-1ubuntu1+srt4_amd64"; - sha256 = "069s7km994c2z89jndwwrpspq0z7jyxr56ma057hbrilfpp4r7yd"; - url = "mirror://steamrt/pool/main/libt/libtool/libltdl7_2.4.2-1ubuntu1+srt4_amd64.deb"; + name = "libltdl7_2.4.2-1ubuntu1+srt5_amd64"; + sha256 = "0ly9p5xilsf0d214mrx96nc3gn1xm1b68dzizsimhqa3bfpckzbb"; + url = "mirror://steamrt/pool/main/libt/libtool/libltdl7_2.4.2-1ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libltdl7.deb"; }; } rec { - name = "libmikmod2_3.1.12-2+srt4_amd64"; - sha256 = "11flm0w3vwf66yi9mqf43ma3bc6jwg6xcz71h4a3jgqahsg3skfb"; - url = "mirror://steamrt/pool/main/libm/libmikmod/libmikmod2_3.1.12-2+srt4_amd64.deb"; + name = "libmikmod2_3.1.12-2+srt5_amd64"; + sha256 = "1i6kwzy1dz0a78jm0vpa0hjqahkwnj8yab8aky2srsf07y8bz2r8"; + url = "mirror://steamrt/pool/main/libm/libmikmod/libmikmod2_3.1.12-2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libmikmod2.deb"; }; } rec { - name = "libncurses5_5.9-4+srt4_amd64"; - sha256 = "08wb0y9dizj7ngsivl2rpikjfl246q1jib6r0nqg7c6r05h8k46m"; - url = "mirror://steamrt/pool/main/n/ncurses/libncurses5_5.9-4+srt4_amd64.deb"; + name = "libncurses5_5.9-4+srt5_amd64"; + sha256 = "1b4j17npqdhj6afcw7cj37k6dr2kmbgpjyv7c0viq82165bjacfp"; + url = "mirror://steamrt/pool/main/n/ncurses/libncurses5_5.9-4+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libncurses5.deb"; }; } rec { - name = "libncursesw5_5.9-4+srt4_amd64"; - sha256 = "1gv0w7jrx9zd59zg7z38qzlcp48h7yyfj4jrbfsifl54ryn4fgwh"; - url = "mirror://steamrt/pool/main/n/ncurses/libncursesw5_5.9-4+srt4_amd64.deb"; + name = "libncursesw5_5.9-4+srt5_amd64"; + sha256 = "0gavz5rh8hz6ir3x09p57balxl8zprjsglgf2craq340qpgqw4s6"; + url = "mirror://steamrt/pool/main/n/ncurses/libncursesw5_5.9-4+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libncursesw5.deb"; }; } rec { - name = "libnm-glib4_0.9.4.0-0ubuntu4.2+steamrt1+srt4_amd64"; - sha256 = "0f3h1hh4vn0ysr099lgwk8dx3462cpvmz3ig8r6d4vhxyzyh5a9z"; - url = "mirror://steamrt/pool/main/n/network-manager/libnm-glib4_0.9.4.0-0ubuntu4.2+steamrt1+srt4_amd64.deb"; + name = "libnm-glib4_0.9.4.0-0ubuntu4.2+steamrt2+srt1_amd64"; + sha256 = "0dw0mfwia3z6icj01558xgdjmi7g6g4nig4vrjbmlz05f9l2rck3"; + url = "mirror://steamrt/pool/main/n/network-manager/libnm-glib4_0.9.4.0-0ubuntu4.2+steamrt2+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libnm-glib4.deb"; }; } rec { - name = "libnm-util2_0.9.4.0-0ubuntu4.2+steamrt1+srt4_amd64"; - sha256 = "1dlfym38qs8m3g38z776vvpxg77xx2mjab7qipsc0lnppjn8gnss"; - url = "mirror://steamrt/pool/main/n/network-manager/libnm-util2_0.9.4.0-0ubuntu4.2+steamrt1+srt4_amd64.deb"; + name = "libnm-util2_0.9.4.0-0ubuntu4.2+steamrt2+srt1_amd64"; + sha256 = "1r9qw0mx38zisj6lr9bk8yv9f3yf2l80y4rvgxq6k28ccz5sahvs"; + url = "mirror://steamrt/pool/main/n/network-manager/libnm-util2_0.9.4.0-0ubuntu4.2+steamrt2+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libnm-util2.deb"; }; } rec { - name = "libnotify4_0.7.5-1+srt4_amd64"; - sha256 = "1d61w65qxs93hpn4a8awzhjqcv7yva96n65309630axsm48cqxbd"; - url = "mirror://steamrt/pool/main/libn/libnotify/libnotify4_0.7.5-1+srt4_amd64.deb"; + name = "libnotify4_0.7.5-1+srt5_amd64"; + sha256 = "15ny5m925wrn0m394gn88288zgdjf99m5jg9pxyfirhvjmpp8pmf"; + url = "mirror://steamrt/pool/main/libn/libnotify/libnotify4_0.7.5-1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libnotify4.deb"; }; } rec { - name = "libnspr4_4.10.10-0ubuntu0.12.04.1+srt1_amd64"; - sha256 = "1k08330f3fhr7c6bpm4b5qdyc2kkmz8fa5bgk1a8psxqvfdlsyap"; - url = "mirror://steamrt/pool/main/n/nspr/libnspr4_4.10.10-0ubuntu0.12.04.1+srt1_amd64.deb"; + name = "libnspr4_4.12-0ubuntu0.12.04.1+srt2_amd64"; + sha256 = "11y0nj7pc94gs3ndxph50whs1yx8lys48c44vj1207m2mkw3xdq7"; + url = "mirror://steamrt/pool/main/n/nspr/libnspr4_4.12-0ubuntu0.12.04.1+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libnspr4.deb"; }; } rec { - name = "libnss3_3.19.2.1-0ubuntu0.12.04.2+srt1_amd64"; - sha256 = "1bxg7wk179gwi7s4xrn1bkl2amnbqrf11qsdw384cyq9c2hwfagr"; - url = "mirror://steamrt/pool/main/n/nss/libnss3_3.19.2.1-0ubuntu0.12.04.2+srt1_amd64.deb"; + name = "libnss3_3.26.2-0ubuntu0.12.04.1+srt1_amd64"; + sha256 = "0a5mqk6fry96jgpn27fv66mzg7s7mn00jhiayh73q4ddlv52p1r6"; + url = "mirror://steamrt/pool/main/n/nss/libnss3_3.26.2-0ubuntu0.12.04.1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libnss3.deb"; }; } rec { - name = "libogg0_1.2.2~dfsg-1ubuntu1+srt4_amd64"; - sha256 = "0829hivgxzmhck0l16lg16qbphkhsrnqb2px4ksrzbspmg6b5rb1"; - url = "mirror://steamrt/pool/main/libo/libogg/libogg0_1.2.2~dfsg-1ubuntu1+srt4_amd64.deb"; + name = "libogg0_1.2.2~dfsg-1ubuntu1+srt5_amd64"; + sha256 = "1r06qcfw2hmm1lxgvndzjw24nawxc2qd2qd3lh7w8qmj2zrgp3zd"; + url = "mirror://steamrt/pool/main/libo/libogg/libogg0_1.2.2~dfsg-1ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libogg0.deb"; }; } rec { - name = "libopenal1_1.13-4ubuntu3+steamrt1+srt4_amd64"; - sha256 = "08gj208gfh37lfnxz1xksbmm1g78ax812z0rk12ahl4w72jm1yjy"; - url = "mirror://steamrt/pool/main/o/openal-soft/libopenal1_1.13-4ubuntu3+steamrt1+srt4_amd64.deb"; + name = "libopenal1_1.16.0-3+srt1_amd64"; + sha256 = "02dc0xfwh1jmhm0l4wig3ybs2yy48hdarnbfjv69m9aryjpbh6gj"; + url = "mirror://steamrt/pool/main/o/openal-soft/libopenal1_1.16.0-3+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libopenal1.deb"; }; } rec { - name = "liborc-0.4-0_0.4.16-1ubuntu2+srt4_amd64"; - sha256 = "0pgiha65y3rrqm095vmwc27498drqcgadiqyh4zyq2h2zi2ki60j"; - url = "mirror://steamrt/pool/main/o/orc/liborc-0.4-0_0.4.16-1ubuntu2+srt4_amd64.deb"; + name = "liborc-0.4-0_0.4.16-1ubuntu2+srt5_amd64"; + sha256 = "13s7ni24igdkvmcs3d13ncll36clfmm14ggjqd23dsgyzmip5n18"; + url = "mirror://steamrt/pool/main/o/orc/liborc-0.4-0_0.4.16-1ubuntu2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "liborc-0.4-0.deb"; }; } rec { - name = "libp11-kit0_0.12-2ubuntu1+srt4_amd64"; - sha256 = "1hsncmfp6h3ca5w2bhaxbr6y2ck8fpzp0zhjijgfnyaqvsjc6wwa"; - url = "mirror://steamrt/pool/main/p/p11-kit/libp11-kit0_0.12-2ubuntu1+srt4_amd64.deb"; + name = "libp11-kit0_0.12-2ubuntu1+srt5_amd64"; + sha256 = "00x01l29gh4zl0nfsyh90ixgvln6kcs2963vmmjaql4h1cgvi27g"; + url = "mirror://steamrt/pool/main/p/p11-kit/libp11-kit0_0.12-2ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libp11-kit0.deb"; }; } rec { - name = "libpango1.0-0_1.30.0-0ubuntu3.1+steamrt1+srt4_amd64"; - sha256 = "16hwn8a30ydarlw3rvpda48m0z0k5y1qw5vdg6syjaqcbwx15mll"; - url = "mirror://steamrt/pool/main/p/pango1.0/libpango1.0-0_1.30.0-0ubuntu3.1+steamrt1+srt4_amd64.deb"; + name = "libpango1.0-0_1.30.0-0ubuntu3.1+steamrt1+srt5_amd64"; + sha256 = "0dcimf6vsiv51lkavwbw980fll3vpki86i3rqm8vr37iz59798zf"; + url = "mirror://steamrt/pool/main/p/pango1.0/libpango1.0-0_1.30.0-0ubuntu3.1+steamrt1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libpango1.0-0.deb"; }; } rec { - name = "libpci3_3.1.8-2ubuntu5+srt4_amd64"; - sha256 = "041hxfsk0r7rh02h16igcr0141gmci4ljadljcxsa1yiyn41b4rr"; - url = "mirror://steamrt/pool/main/p/pciutils/libpci3_3.1.8-2ubuntu5+srt4_amd64.deb"; + name = "libpci3_3.1.8-2ubuntu6+srt1_amd64"; + sha256 = "167a5rgzyss746s07fkal7vy89i0m5syjm2vdwfiln3ncil4s86y"; + url = "mirror://steamrt/pool/main/p/pciutils/libpci3_3.1.8-2ubuntu6+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libpci3.deb"; }; } rec { - name = "libpcre3_8.12-4+srt4_amd64"; - sha256 = "1m53qvhqbicybi43zjjblhaqxfnlvq1m61mkvdhwskcxh1y5zpic"; - url = "mirror://steamrt/pool/main/p/pcre3/libpcre3_8.12-4+srt4_amd64.deb"; + name = "libpcre3_8.12-4+steamrt1.1ubuntu0.2+srt1_amd64"; + sha256 = "0x3yzmxvlg2xyy2sm03vvr4c46r7ywbns7gqbshzgn656zqdid00"; + url = "mirror://steamrt/pool/main/p/pcre3/libpcre3_8.12-4+steamrt1.1ubuntu0.2+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libpcre3.deb"; }; } rec { - name = "libpcrecpp0_8.12-4+srt4_amd64"; - sha256 = "0dv8a32dsvklrnvw66rxb7xim9ylhr9w4qvns527v6fl98rvg08l"; - url = "mirror://steamrt/pool/main/p/pcre3/libpcrecpp0_8.12-4+srt4_amd64.deb"; + name = "libpcrecpp0_8.12-4+steamrt1.1ubuntu0.2+srt1_amd64"; + sha256 = "1rlkj982w99x0mz008snkyqr1v13h165yj2z4jwdczpd1bsrra9h"; + url = "mirror://steamrt/pool/main/p/pcre3/libpcrecpp0_8.12-4+steamrt1.1ubuntu0.2+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libpcrecpp0.deb"; }; } rec { - name = "libpixman-1-0_0.30.2-1ubuntu0.0.0.0.2+srt1_amd64"; - sha256 = "0bljhrivr6dw181gisvy8dz6y9mjn0g9w3d5s2f5h8772g80mx7f"; - url = "mirror://steamrt/pool/main/p/pixman/libpixman-1-0_0.30.2-1ubuntu0.0.0.0.2+srt1_amd64.deb"; + name = "libpixman-1-0_0.30.2-1ubuntu0.0.0.0.3+srt2_amd64"; + sha256 = "15sa863fia26lclp821j0c747dv8a8igz5l86n5ff1m3dmlb5hp3"; + url = "mirror://steamrt/pool/main/p/pixman/libpixman-1-0_0.30.2-1ubuntu0.0.0.0.3+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libpixman-1-0.deb"; }; } rec { - name = "libpng12-0_1.2.46-3ubuntu4.2+srt1_amd64"; - sha256 = "00wis5q2xpdfh5z42rfl95j63lbsz5l3i5hvsyvim8r2h1r2nyn0"; - url = "mirror://steamrt/pool/main/libp/libpng/libpng12-0_1.2.46-3ubuntu4.2+srt1_amd64.deb"; + name = "libpng12-0_1.2.46-3ubuntu4.2+srt2_amd64"; + sha256 = "0gnjsh72c9w1229fk5fx753lpmcqzizx7dizrdh3wk1qmivhddl1"; + url = "mirror://steamrt/pool/main/libp/libpng/libpng12-0_1.2.46-3ubuntu4.2+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libpng12-0.deb"; }; } rec { - name = "libpulse0_1.1-0ubuntu15.2+steamrt1+srt4_amd64"; - sha256 = "150gpmn1gb0ykd3cgggc9zkb070figgwrcdqx89qa2kwvkxlg6vl"; - url = "mirror://steamrt/pool/main/p/pulseaudio/libpulse0_1.1-0ubuntu15.2+steamrt1+srt4_amd64.deb"; + name = "libpulse0_1.1-0ubuntu15.2+steamrt1+srt5_amd64"; + sha256 = "17d3f6gwbdyn058bbd8f0hj4ywp8rmhy9wsf2pnfkh219r5b98h2"; + url = "mirror://steamrt/pool/main/p/pulseaudio/libpulse0_1.1-0ubuntu15.2+steamrt1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libpulse0.deb"; }; } rec { - name = "libroken18-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64"; - sha256 = "07ldw9iyy9akp5zq2h7l85q3x8ggsx2hah51d0j41lfqrysyig63"; - url = "mirror://steamrt/pool/main/h/heimdal/libroken18-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64.deb"; + name = "libroken18-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64"; + sha256 = "16j666k8l85icbgy9ds9hdmcm60axsp8nxjc1n11jd64d9slb792"; + url = "mirror://steamrt/pool/main/h/heimdal/libroken18-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libroken18-heimdal.deb"; }; } rec { - name = "librtmp0_2.4~20110711.gitc28f1bab-1+srt4_amd64"; - sha256 = "0lzgsydisj6z7dgjgkmr42mzv11j61r9wny1m31vgm990p5zkh7n"; - url = "mirror://steamrt/pool/main/r/rtmpdump/librtmp0_2.4~20110711.gitc28f1bab-1+srt4_amd64.deb"; + name = "librtmp0_2.4~20110711.gitc28f1bab-1+srt5_amd64"; + sha256 = "0g07a8vxxglsh7sswqznsi7lmq5ibchhkhrmfywcdinxniwcr7ha"; + url = "mirror://steamrt/pool/main/r/rtmpdump/librtmp0_2.4~20110711.gitc28f1bab-1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "librtmp0.deb"; }; } rec { - name = "libsamplerate0_0.1.8-4+srt4_amd64"; - sha256 = "1g6nh8p3q8bsqw9w0ifpl86gql9lqqwxk7zn9bl62pq393h107mg"; - url = "mirror://steamrt/pool/main/libs/libsamplerate/libsamplerate0_0.1.8-4+srt4_amd64.deb"; + name = "libsamplerate0_0.1.8-4+srt5_amd64"; + sha256 = "1xr5k6zyfw8lc5s6sbg57d7v33045hg9l6a1rh5f46v99hi8k1rr"; + url = "mirror://steamrt/pool/main/libs/libsamplerate/libsamplerate0_0.1.8-4+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsamplerate0.deb"; }; } rec { - name = "libsasl2-2_2.1.25.dfsg1-3ubuntu0.1+srt4_amd64"; - sha256 = "0sp76gcpw1zgqpyq7bp3gmavlncflkrxiyg738nsf9mb65xy4v94"; - url = "mirror://steamrt/pool/main/c/cyrus-sasl2/libsasl2-2_2.1.25.dfsg1-3ubuntu0.1+srt4_amd64.deb"; + name = "libsasl2-2_2.1.25.dfsg1-3ubuntu0.1+srt5_amd64"; + sha256 = "1i7hh43fiadg1y35dmjm03s8mcbanv8jfnnjrcccabahsk8fpdj0"; + url = "mirror://steamrt/pool/main/c/cyrus-sasl2/libsasl2-2_2.1.25.dfsg1-3ubuntu0.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsasl2-2.deb"; }; } rec { - name = "libsdl-image1.2_1.2.10-3+srt4_amd64"; - sha256 = "0jhlbn5jfap15d8nr2fz2hcwlv32ax29gddd5jg08vmfga767sqi"; - url = "mirror://steamrt/pool/main/s/sdl-image1.2/libsdl-image1.2_1.2.10-3+srt4_amd64.deb"; + name = "libsdl-image1.2_1.2.10-3+srt5_amd64"; + sha256 = "180sia6zc48y2f3l1sywp8am0gqzc9swm711fq8b2kdd4rn3wicm"; + url = "mirror://steamrt/pool/main/s/sdl-image1.2/libsdl-image1.2_1.2.10-3+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsdl-image1.2.deb"; }; } rec { - name = "libsdl-mixer1.2_1.2.11-7+steamrt1+srt4_amd64"; - sha256 = "0cb84d0x3fjsl3w48jmxjzc7xq9c6g73p99baxdg50vhqssr7dmw"; - url = "mirror://steamrt/pool/main/s/sdl-mixer1.2/libsdl-mixer1.2_1.2.11-7+steamrt1+srt4_amd64.deb"; + name = "libsdl-mixer1.2_1.2.11-7+steamrt1+srt5_amd64"; + sha256 = "0z3zxvsvlnvzsvprvy5q4y99irjkzm4ilv0znaic5x967k3zpjp0"; + url = "mirror://steamrt/pool/main/s/sdl-mixer1.2/libsdl-mixer1.2_1.2.11-7+steamrt1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsdl-mixer1.2.deb"; }; } rec { - name = "libsdl-ttf2.0-0_2.0.9-1.1ubuntu1+srt4_amd64"; - sha256 = "1dqp16qi413xpv8nmyrbgx2x3dcxsyk2giifz7pa6jyvawcx7ghv"; - url = "mirror://steamrt/pool/main/s/sdl-ttf2.0/libsdl-ttf2.0-0_2.0.9-1.1ubuntu1+srt4_amd64.deb"; + name = "libsdl-ttf2.0-0_2.0.9-1.1ubuntu1+srt5_amd64"; + sha256 = "11ks71izg46k2pjnd5jdk03xkzz7jmxm5k3mkwq8b42grdiadd6a"; + url = "mirror://steamrt/pool/main/s/sdl-ttf2.0/libsdl-ttf2.0-0_2.0.9-1.1ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsdl-ttf2.0-0.deb"; }; } rec { - name = "libsdl1.2debian_1.2.15-5+steamrt1+srt4_amd64"; - sha256 = "1zcy3njzkahd5rq4yh7i07q3x1wyfpzl6kzynbsqkx9cnf53342k"; - url = "mirror://steamrt/pool/main/libs/libsdl1.2/libsdl1.2debian_1.2.15-5+steamrt1+srt4_amd64.deb"; + name = "libsdl1.2debian_1.2.15-5+steamrt1+srt5_amd64"; + sha256 = "1i2072wzjmrz97pqxm9mfdqqvx6q6x6w8xqa5f4jxmhm9sb7x7wb"; + url = "mirror://steamrt/pool/main/libs/libsdl1.2/libsdl1.2debian_1.2.15-5+steamrt1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsdl1.2debian.deb"; }; } rec { - name = "libsdl2_2.0.4+steamrt2+srt1_amd64"; - sha256 = "04v4znqksg9qj4hnz20czwx4qy4i6p9csqql4yd299wvjl9k61j5"; - url = "mirror://steamrt/pool/main/libs/libsdl2/libsdl2_2.0.4+steamrt2+srt1_amd64.deb"; + name = "libsdl2_2.0.8+steamrt1+srt1_amd64"; + sha256 = "1wm48pdd9sxd581jhwi2b6a4ln16wbz72p74q8l8fypq6gmvifcc"; + url = "mirror://steamrt/pool/main/libs/libsdl2/libsdl2_2.0.8+steamrt1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsdl2.deb"; }; } rec { - name = "libsdl2-image_2.0.1+steamrt2+srt1_amd64"; - sha256 = "01kwm3yjq275j7hnd52hfjbhj5ijfz5wxmc1vpdp88q89zbkw227"; - url = "mirror://steamrt/pool/main/libs/libsdl2-image/libsdl2-image_2.0.1+steamrt2+srt1_amd64.deb"; + name = "libsdl2-image_2.0.3+steamrt1+srt1_amd64"; + sha256 = "0nngj4lvk1r780wpghm9wcg9gmv0yswp56ff53h2jhn6k3gbcqsw"; + url = "mirror://steamrt/pool/main/libs/libsdl2-image/libsdl2-image_2.0.3+steamrt1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsdl2-image.deb"; }; } rec { - name = "libsdl2-mixer_2.0.1+steamrt1+srt1_amd64"; - sha256 = "0bzv3spjksn504ma7haywyi3dlb5nl35wxp83if9n58i4850j6sd"; - url = "mirror://steamrt/pool/main/libs/libsdl2-mixer/libsdl2-mixer_2.0.1+steamrt1+srt1_amd64.deb"; + name = "libsdl2-mixer_2.0.2+steamrt1+srt1_amd64"; + sha256 = "0l2l0krldx0yhdqnmj6zfsx13c1zfr8hky48gbs94rlgwl02ym6w"; + url = "mirror://steamrt/pool/main/libs/libsdl2-mixer/libsdl2-mixer_2.0.2+steamrt1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsdl2-mixer.deb"; }; } rec { - name = "libsdl2-net_2.0.1+srt1_amd64"; - sha256 = "16zx9cj56m939x3zrvq1ypxsd26vnc81gmkpkg5j80jl2lwz6b6v"; - url = "mirror://steamrt/pool/main/libs/libsdl2-net/libsdl2-net_2.0.1+srt1_amd64.deb"; + name = "libsdl2-net_2.0.1+srt2_amd64"; + sha256 = "1850n1zv9cpbnv5n3nk5knk30pm0f4g8x2cx70kyxbprfkq7894v"; + url = "mirror://steamrt/pool/main/libs/libsdl2-net/libsdl2-net_2.0.1+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsdl2-net.deb"; }; } rec { - name = "libsdl2-ttf_2.0.14+srt1_amd64"; - sha256 = "14sfnmb0zz0mhvl3jl45jqc2sci59gmzdn5kif08ai8ri2bk9sza"; - url = "mirror://steamrt/pool/main/libs/libsdl2-ttf/libsdl2-ttf_2.0.14+srt1_amd64.deb"; + name = "libsdl2-ttf_2.0.14+srt2_amd64"; + sha256 = "1bwhm58zqh452szjjj3m3ny2samx19qw3x6q7f18h7164d5vvm4a"; + url = "mirror://steamrt/pool/main/libs/libsdl2-ttf/libsdl2-ttf_2.0.14+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsdl2-ttf.deb"; }; } rec { - name = "libselinux1_2.1.0-4.1ubuntu1+srt4_amd64"; - sha256 = "1y2a5f9qsxgdhak7vf72jsd6drjim172qp6m897yx7xbbk8ikpnr"; - url = "mirror://steamrt/pool/main/libs/libselinux/libselinux1_2.1.0-4.1ubuntu1+srt4_amd64.deb"; + name = "libselinux1_2.1.0-4.1ubuntu1+srt5_amd64"; + sha256 = "001wfrryd549gh1qd4v8fz3m78vpjwdx1vh34cw0dgi3kxmjxp0q"; + url = "mirror://steamrt/pool/main/libs/libselinux/libselinux1_2.1.0-4.1ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libselinux1.deb"; }; } rec { - name = "libsm6_1.2.0-2build1+srt4_amd64"; - sha256 = "0fjb9grh86vz58g6cb5d89hxnppqf7w5apivqb3h6sd5axkg2z1r"; - url = "mirror://steamrt/pool/main/libs/libsm/libsm6_1.2.0-2build1+srt4_amd64.deb"; + name = "libsm6_1.2.0-2build1+srt5_amd64"; + sha256 = "0k0hyh6b36wvcn8ss24f7lqp2pb0wdvb5zh57y7zfxglgr9vj083"; + url = "mirror://steamrt/pool/main/libs/libsm/libsm6_1.2.0-2build1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsm6.deb"; }; } rec { - name = "libsndfile1_1.0.25-4+srt4_amd64"; - sha256 = "0fdv7ca60s23qc5azjsg7aaznqksx5xh0bngzc6sl8bqvnnc8z1g"; - url = "mirror://steamrt/pool/main/libs/libsndfile/libsndfile1_1.0.25-4+srt4_amd64.deb"; + name = "libsndfile1_1.0.25-4+steamrt1.1ubuntu0.1+srt1_amd64"; + sha256 = "17sds50cyvpfrm6x8hddb0ir5xsch79k8gyghkzi59dav2j4j2f4"; + url = "mirror://steamrt/pool/main/libs/libsndfile/libsndfile1_1.0.25-4+steamrt1.1ubuntu0.1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsndfile1.deb"; }; } rec { - name = "libspeex1_1.2~rc1-3ubuntu2+srt4_amd64"; - sha256 = "1as44g6g5li8q6mdxwnwfbqg9f779vyjh2bqygv5xm339viaj510"; - url = "mirror://steamrt/pool/main/s/speex/libspeex1_1.2~rc1-3ubuntu2+srt4_amd64.deb"; + name = "libspeex1_1.2~rc1-3ubuntu2+srt5_amd64"; + sha256 = "0b0lrg7arrnszc1hzya04ch3j4lbcrpxqf5hxxz2wm5k5qb9f6rv"; + url = "mirror://steamrt/pool/main/s/speex/libspeex1_1.2~rc1-3ubuntu2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libspeex1.deb"; }; } rec { - name = "libspeexdsp1_1.2~rc1-3ubuntu2+srt4_amd64"; - sha256 = "0rsrl5z379bls6bhb0nqc92ilkd7jkg7bdmxw0xg6vw9l66w78ln"; - url = "mirror://steamrt/pool/main/s/speex/libspeexdsp1_1.2~rc1-3ubuntu2+srt4_amd64.deb"; + name = "libspeexdsp1_1.2~rc1-3ubuntu2+srt5_amd64"; + sha256 = "1vks6i3ipggcd2b4ayhkpzj70rdwvlmgh20z7ac8hcnhfnsmvmbc"; + url = "mirror://steamrt/pool/main/s/speex/libspeexdsp1_1.2~rc1-3ubuntu2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libspeexdsp1.deb"; }; } rec { - name = "libsqlite3-0_3.7.9-2ubuntu1.2+srt1_amd64"; - sha256 = "1x1byhdvr0zdfl9dj07qpndifbs9x416vxl7rpmig9g0makxvsmx"; - url = "mirror://steamrt/pool/main/s/sqlite3/libsqlite3-0_3.7.9-2ubuntu1.2+srt1_amd64.deb"; + name = "libsqlite3-0_3.7.9-2ubuntu1.2+srt2_amd64"; + sha256 = "0yavzpx56kf27pfjif6s86bg9wmr9078d7p34dpvbzp0aibjifs8"; + url = "mirror://steamrt/pool/main/s/sqlite3/libsqlite3-0_3.7.9-2ubuntu1.2+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libsqlite3-0.deb"; }; } rec { - name = "libssl1.0.0_1.0.1-4ubuntu5.33+srt1_amd64"; - sha256 = "11n8iwsc562i1glpisjs9xvlmz4a4xibq6axkhi0xnvv0pbfnxiw"; - url = "mirror://steamrt/pool/main/o/openssl/libssl1.0.0_1.0.1-4ubuntu5.33+srt1_amd64.deb"; + name = "libssl1.0.0_1.0.1-4ubuntu5.36+steamrt1+srt2_amd64"; + sha256 = "149wrr5k7hx5lbgkyi4rh2sgr15m9k8x075gilab60mj1b6cv439"; + url = "mirror://steamrt/pool/main/o/openssl/libssl1.0.0_1.0.1-4ubuntu5.36+steamrt1+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libssl1.0.0.deb"; }; } rec { - name = "libstdc++6_4.8.1-2ubuntu1~12.04+steamrt2+srt1_amd64"; - sha256 = "0fdmjsyl8a5n14gkwhvkr3xfcfr7q9djapsk8gj56d6r0ydg9yxc"; - url = "mirror://steamrt/pool/main/g/gcc-4.8/libstdc++6_4.8.1-2ubuntu1~12.04+steamrt2+srt1_amd64.deb"; + name = "libstdc++6_5.4.0-7.really.6+steamrt1.1+srt1_amd64"; + sha256 = "0fnqw21m8byigf4303z7qvficral6ar3lsxrsx4ai9r8d6bmmgdn"; + url = "mirror://steamrt/pool/main/g/gcc-5/libstdc++6_5.4.0-7.really.6+steamrt1.1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libstdc++6.deb"; }; } rec { - name = "libstdc++6-4.6-pic_4.6.3-1ubuntu5+srt4_amd64"; - sha256 = "1yn54vcd5hxx7rxzvshbfidfksl1c0pvl8xv427lkf7xni3jx0xb"; - url = "mirror://steamrt/pool/main/g/gcc-4.6/libstdc++6-4.6-pic_4.6.3-1ubuntu5+srt4_amd64.deb"; + name = "libstdc++6-4.6-pic_4.6.3-1ubuntu5+steamrt1.1+srt1_amd64"; + sha256 = "0km4v33pzknjq0ah7w03s8xny21qggx6pc2q1ah9dlra5dwv4nsm"; + url = "mirror://steamrt/pool/main/g/gcc-4.6/libstdc++6-4.6-pic_4.6.3-1ubuntu5+steamrt1.1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libstdc++6-4.6-pic.deb"; }; } rec { - name = "libswscale2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_amd64"; - sha256 = "0y0k0glqnmsq69sbp3s47pw37vvf969n3chniv3jmrjkjghkp44h"; - url = "mirror://steamrt/pool/main/liba/libav/libswscale2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_amd64.deb"; + name = "libswscale2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_amd64"; + sha256 = "1shni0sdcv1jqkfsqy5j3kkr73lifb3ip9lqz8cxx23dlvbllly9"; + url = "mirror://steamrt/pool/main/liba/libav/libswscale2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libswscale2.deb"; }; } rec { - name = "libtasn1-3_2.10-1ubuntu1.4+srt1_amd64"; - sha256 = "0kqv3ndnw1lcz5p190bxpq6rglpcxdsz44wyr6yl7w5wpfwcbs61"; - url = "mirror://steamrt/pool/main/libt/libtasn1-3/libtasn1-3_2.10-1ubuntu1.4+srt1_amd64.deb"; + name = "libtasn1-3_2.10-1ubuntu1.5+srt2_amd64"; + sha256 = "1sjklhs977mrvs7qci0hc3w6x3gjrq5c6lfxjma7bjg731xwdivp"; + url = "mirror://steamrt/pool/main/libt/libtasn1-3/libtasn1-3_2.10-1ubuntu1.5+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libtasn1-3.deb"; }; } rec { - name = "libtbb2_4.0+r233-1+srt4_amd64"; - sha256 = "1ngm0nkzk8w5s7dp01983lybd256130kdc8f4jmlyikhvyx0khgh"; - url = "mirror://steamrt/pool/main/t/tbb/libtbb2_4.0+r233-1+srt4_amd64.deb"; + name = "libtbb2_4.0+r233-1+steamrt2+srt1_amd64"; + sha256 = "18rc6jhkpqnqvrw29zffahmjihrdrwmh4ydnx3433j6wc29m8p4v"; + url = "mirror://steamrt/pool/main/t/tbb/libtbb2_4.0+r233-1+steamrt2+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libtbb2.deb"; }; } rec { - name = "libtdb1_1.2.9-4+srt4_amd64"; - sha256 = "112dq62phrd3czhi27kdk4ra9is5phxpzbn26x4bis4y3ccm0cfm"; - url = "mirror://steamrt/pool/main/t/tdb/libtdb1_1.2.9-4+srt4_amd64.deb"; + name = "libtdb1_1.2.9-4+srt5_amd64"; + sha256 = "1wq2956jmq9zhd7gcpgvqq7d1rdjk954hgcx540zwgxs57brzkrw"; + url = "mirror://steamrt/pool/main/t/tdb/libtdb1_1.2.9-4+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libtdb1.deb"; }; } rec { - name = "libtheora0_1.1.1+dfsg.1-3ubuntu2+srt4_amd64"; - sha256 = "01zvb8msi6pkjs85y4j78a110fzlmnjp69m7z7qwr2r7rr05w6r0"; - url = "mirror://steamrt/pool/main/libt/libtheora/libtheora0_1.1.1+dfsg.1-3ubuntu2+srt4_amd64.deb"; + name = "libtheora0_1.1.1+dfsg.1-3ubuntu2+srt5_amd64"; + sha256 = "15b6sg3dhamlgaq28w3zlwif5aps0ybi0hc29k3vv2s48f6vqfi8"; + url = "mirror://steamrt/pool/main/libt/libtheora/libtheora0_1.1.1+dfsg.1-3ubuntu2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libtheora0.deb"; }; } rec { - name = "libtiff4_3.9.5-2ubuntu1.8+srt1_amd64"; - sha256 = "13j4pqqba0bf2fq0871s8b4wkw8zyv0q80x0n07lkjiv7bvrrkcw"; - url = "mirror://steamrt/pool/main/t/tiff/libtiff4_3.9.5-2ubuntu1.8+srt1_amd64.deb"; + name = "libtiff4_3.9.5-2ubuntu1.9+srt2_amd64"; + sha256 = "038wcp777pj2y3scwkqfdnb6yjsag5dnqajrdiv7pxmvkgn3bc2l"; + url = "mirror://steamrt/pool/main/t/tiff/libtiff4_3.9.5-2ubuntu1.9+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libtiff4.deb"; }; } rec { - name = "libtinfo5_5.9-4+srt4_amd64"; - sha256 = "07pp7dgp33yjdk0i3s7q73qq0pd0ylfbpvr5jssjap0wsp3aqq66"; - url = "mirror://steamrt/pool/main/n/ncurses/libtinfo5_5.9-4+srt4_amd64.deb"; + name = "libtinfo5_5.9-4+srt5_amd64"; + sha256 = "1w22aqm9zla5cfcvkridgzwnkhj3lyjqf61dl8ppnnbk8rhj07x4"; + url = "mirror://steamrt/pool/main/n/ncurses/libtinfo5_5.9-4+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libtinfo5.deb"; }; } rec { - name = "libudev0_175-0ubuntu9.2+srt4_amd64"; - sha256 = "07jvb8ghflb87f4dvgii5jv5qzz31g9s7c3k8wb9w9jp574y7079"; - url = "mirror://steamrt/pool/main/u/udev/libudev0_175-0ubuntu9.2+srt4_amd64.deb"; + name = "libudev0_175-0ubuntu9.10+srt1_amd64"; + sha256 = "146kdj719rkgj5v2g0lzs7qqb59a2xgplkqrrafpkssqangvfmq1"; + url = "mirror://steamrt/pool/main/u/udev/libudev0_175-0ubuntu9.10+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libudev0.deb"; }; } rec { - name = "libusb-1.0-0_1.0.19-1+srt1_amd64"; - sha256 = "19f9mhbjm6r4yxdr3fvsn0ad8j7dm07y4bzwqf0n5i715jcc0qaf"; - url = "mirror://steamrt/pool/main/libu/libusb-1.0/libusb-1.0-0_1.0.19-1+srt1_amd64.deb"; + name = "libusb-1.0-0_1.0.19-1+srt2_amd64"; + sha256 = "0vnsr4syd7alas356hv1radm5rb8vlh69h5ljlh24sqs923vgg28"; + url = "mirror://steamrt/pool/main/libu/libusb-1.0/libusb-1.0-0_1.0.19-1+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libusb-1.0-0.deb"; }; } rec { - name = "libuuid1_2.20.1-1ubuntu3+srt4_amd64"; - sha256 = "060wnsbhxl0aqyh1ymbcdma59v10b1vgi3h3xvvilzl869ivwr1p"; - url = "mirror://steamrt/pool/main/u/util-linux/libuuid1_2.20.1-1ubuntu3+srt4_amd64.deb"; + name = "libuuid1_2.20.1-1ubuntu3.1+steamrt1.1+srt1_amd64"; + sha256 = "03d2jj9l3k31wb2wrvcjpa79cp7yjsqqms58vqh9pksbnmyrddr2"; + url = "mirror://steamrt/pool/main/u/util-linux/libuuid1_2.20.1-1ubuntu3.1+steamrt1.1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libuuid1.deb"; }; } rec { - name = "libva-glx1_1.3.1-3+steamrt4+srt1_amd64"; - sha256 = "1v6n0ryr48d8f25vy06d9vh84z2zf3kmg6k8pg89j0s3spdyb44v"; - url = "mirror://steamrt/pool/main/libv/libva/libva-glx1_1.3.1-3+steamrt4+srt1_amd64.deb"; + name = "libva-glx1_1.7.0-1+steamos1+srt1_amd64"; + sha256 = "15scnb989xybb4l8gspbjvs058kjfw0r7ajqak3gxrx7vgqb3i92"; + url = "mirror://steamrt/pool/main/libv/libva/libva-glx1_1.7.0-1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libva-glx1.deb"; }; } rec { - name = "libva-x11-1_1.3.1-3+steamrt4+srt1_amd64"; - sha256 = "03s9kbprf6r48y4ycfixx96ga0n8vfjn7v74sv88kl0lrs8xzjy8"; - url = "mirror://steamrt/pool/main/libv/libva/libva-x11-1_1.3.1-3+steamrt4+srt1_amd64.deb"; + name = "libva-x11-1_1.7.0-1+steamos1+srt1_amd64"; + sha256 = "0f1hmz4218isrwx8823sm7v08dlvyjwphvbjqsgg9qgim0f13j8a"; + url = "mirror://steamrt/pool/main/libv/libva/libva-x11-1_1.7.0-1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libva-x11-1.deb"; }; } rec { - name = "libva1_1.3.1-3+steamrt4+srt1_amd64"; - sha256 = "0700lprd2c636dhqs000amw0nkys77h8mb7698bg30j25yd5kqr4"; - url = "mirror://steamrt/pool/main/libv/libva/libva1_1.3.1-3+steamrt4+srt1_amd64.deb"; + name = "libva1_1.7.0-1+steamos1+srt1_amd64"; + sha256 = "0p3548fnf47vj5kxzrqqpdxvip35xyydkxj7d5iiw9f26fz06drd"; + url = "mirror://steamrt/pool/main/libv/libva/libva1_1.7.0-1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libva1.deb"; }; } rec { - name = "libvdpau1_0.4.1-3ubuntu1.2+srt1_amd64"; - sha256 = "0a519njbsdwpvc49pn08sya34z2wcd8hpl0j44plr4bd2df010g2"; - url = "mirror://steamrt/pool/main/libv/libvdpau/libvdpau1_0.4.1-3ubuntu1.2+srt1_amd64.deb"; + name = "libvdpau1_0.4.1-3ubuntu1.2+srt2_amd64"; + sha256 = "1f1h77y6mf7xs8biaz77kfimp98v9cpjrbfg0qyi4wafwn7jmnsr"; + url = "mirror://steamrt/pool/main/libv/libvdpau/libvdpau1_0.4.1-3ubuntu1.2+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libvdpau1.deb"; }; } rec { - name = "libvorbis0a_1.3.2-1ubuntu3+srt4_amd64"; - sha256 = "1jdvxgvlwnjcvg6009qfklr8mf3678ydrg855smgv8a0nd7v5qiv"; - url = "mirror://steamrt/pool/main/libv/libvorbis/libvorbis0a_1.3.2-1ubuntu3+srt4_amd64.deb"; + name = "libvorbis0a_1.3.2-1ubuntu3+srt5_amd64"; + sha256 = "0sn12vpmgk6jwa97cp6m8wx4197mdgh1ggb2r09hr3p5fyk44nmc"; + url = "mirror://steamrt/pool/main/libv/libvorbis/libvorbis0a_1.3.2-1ubuntu3+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libvorbis0a.deb"; }; } rec { - name = "libvorbisenc2_1.3.2-1ubuntu3+srt4_amd64"; - sha256 = "1ysm1ika8cymh7gmd3p2hdfsnm3jrzyn4g2r12r4m9m6q3l9knz7"; - url = "mirror://steamrt/pool/main/libv/libvorbis/libvorbisenc2_1.3.2-1ubuntu3+srt4_amd64.deb"; + name = "libvorbisenc2_1.3.2-1ubuntu3+srt5_amd64"; + sha256 = "18zd7njnczr93q7x2dz7x3n9yqwp77bjsp52qcxvy4bm7b3pr0bi"; + url = "mirror://steamrt/pool/main/libv/libvorbis/libvorbisenc2_1.3.2-1ubuntu3+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libvorbisenc2.deb"; }; } rec { - name = "libvorbisfile3_1.3.2-1ubuntu3+srt4_amd64"; - sha256 = "0y4r9s5cjcjxi6hy0svzfbqlkaxklb883vcsqn1j0kp9li3jpkbx"; - url = "mirror://steamrt/pool/main/libv/libvorbis/libvorbisfile3_1.3.2-1ubuntu3+srt4_amd64.deb"; + name = "libvorbisfile3_1.3.2-1ubuntu3+srt5_amd64"; + sha256 = "12ninaw71p59lazzvyd3yq3sy4g30x9ywwfm760nbiijb9yq48m4"; + url = "mirror://steamrt/pool/main/libv/libvorbis/libvorbisfile3_1.3.2-1ubuntu3+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libvorbisfile3.deb"; }; } rec { - name = "libvpx1_1.0.0-1+srt4_amd64"; - sha256 = "1275437ph91i67q6naigz4nhmw2a330q72mjv282slk7y187ana5"; - url = "mirror://steamrt/pool/main/libv/libvpx/libvpx1_1.0.0-1+srt4_amd64.deb"; + name = "libvpx1_1.0.0-2+srt1_amd64"; + sha256 = "02r8yklax0nd9z9s0c2iv1pdnwaq7h3ys46vf0wcwfc8n1p6jj9j"; + url = "mirror://steamrt/pool/main/libv/libvpx/libvpx1_1.0.0-2+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libvpx1.deb"; }; } rec { - name = "libvulkan1_1.0.3~git20160215-0.1+steamos5+srt1_amd64"; - sha256 = "18v5vbrvg6l9m768k4cb4xwbxahqrr7zspx1b5a8fv6bw8h3d9l4"; - url = "mirror://steamrt/pool/main/v/vulkan-loader/libvulkan1_1.0.3~git20160215-0.1+steamos5+srt1_amd64.deb"; + name = "libvulkan1_1.1.73+dfsg-1+steamosc2+srt1_amd64"; + sha256 = "1f58xi83frcxpq62yfyqjhxzg2ali4hafv8zinial4ixh5nk2a07"; + url = "mirror://steamrt/pool/main/v/vulkan/libvulkan1_1.1.73+dfsg-1+steamosc2+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libvulkan1.deb"; }; } rec { - name = "libwind0-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64"; - sha256 = "02baqaxcpw306cgr5dvz5pcir7ys08r603m8ahk22bzgxpzl6xk4"; - url = "mirror://steamrt/pool/main/h/heimdal/libwind0-heimdal_1.6~git20120311.dfsg.1-2+srt4_amd64.deb"; + name = "libwind0-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64"; + sha256 = "0wfs33djnx2k5clhwn6rq17pmqv7d2xyr5mihhylc4fs7q179pg0"; + url = "mirror://steamrt/pool/main/h/heimdal/libwind0-heimdal_1.6~git20120311.dfsg.1-2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libwind0-heimdal.deb"; }; } rec { - name = "libwrap0_7.6.q-21+srt4_amd64"; - sha256 = "12wq77h9jczq974fh3c8n4fkqa876kbizvai96jizh7c90z94kvk"; - url = "mirror://steamrt/pool/main/t/tcp-wrappers/libwrap0_7.6.q-21+srt4_amd64.deb"; + name = "libwrap0_7.6.q-21+srt5_amd64"; + sha256 = "1rvgmwh2m633mmz78lccs97sr489bc2qv1vvwl1gf6rd01cmgd99"; + url = "mirror://steamrt/pool/main/t/tcp-wrappers/libwrap0_7.6.q-21+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libwrap0.deb"; }; } rec { - name = "libx11-6_1.4.99.1-0ubuntu2.3+steamrt1+srt1_amd64"; - sha256 = "0qp2q9q1z9sz0pyc7l1n6xa0bc22xsml3vf2yhdls71im3ks7bi9"; - url = "mirror://steamrt/pool/main/libx/libx11/libx11-6_1.4.99.1-0ubuntu2.3+steamrt1+srt1_amd64.deb"; + name = "libx11-6_1.6.3-1ubuntu2.1+srt1_amd64"; + sha256 = "0lf1k902i59f3v9jgjav9gzsiq7pnrfnlzmlmyxkcfwkd8pvkign"; + url = "mirror://steamrt/pool/main/libx/libx11/libx11-6_1.6.3-1ubuntu2.1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libx11-6.deb"; }; } rec { - name = "libx11-data_1.4.99.1-0ubuntu2.3+steamrt1+srt1_all"; - sha256 = "17mygha6q5480ajgv1f4wmgwr3l3zxh92yagh4qfsm6r1j2a5dma"; - url = "mirror://steamrt/pool/main/libx/libx11/libx11-data_1.4.99.1-0ubuntu2.3+steamrt1+srt1_all.deb"; + name = "libx11-data_1.6.3-1ubuntu2.1+srt1_all"; + sha256 = "1imsbk4mg6n1083gjjv6kssm5g842xlbg40vsc4dw97myxycpncw"; + url = "mirror://steamrt/pool/main/libx/libx11/libx11-data_1.6.3-1ubuntu2.1+srt1_all.deb"; source = fetchurl { inherit url sha256; name = "libx11-data.deb"; }; } rec { - name = "libx11-xcb1_1.4.99.1-0ubuntu2.3+steamrt1+srt1_amd64"; - sha256 = "1vsvf6ihz8jbnsarygnfrjb1y7pg44gpk89b8sk449p0c1kmv4yz"; - url = "mirror://steamrt/pool/main/libx/libx11/libx11-xcb1_1.4.99.1-0ubuntu2.3+steamrt1+srt1_amd64.deb"; + name = "libx11-xcb1_1.6.3-1ubuntu2.1+srt1_amd64"; + sha256 = "0l9zprciyrgn4aq91ddmmfhffvms8p9258vv109l62bar4mmg9sz"; + url = "mirror://steamrt/pool/main/libx/libx11/libx11-xcb1_1.6.3-1ubuntu2.1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libx11-xcb1.deb"; }; } rec { - name = "libxau6_1.0.6-4+srt4_amd64"; - sha256 = "1bm0jp69kfnirvlsyj7qxf7dg5b1n53875kxr9asdpw4aqmfj3a6"; - url = "mirror://steamrt/pool/main/libx/libxau/libxau6_1.0.6-4+srt4_amd64.deb"; + name = "libxau6_1.0.6-4+srt5_amd64"; + sha256 = "1l4ij8c6gmv54yfv24dw9903zjczasd6z9lvzd07c5zj4rj7gx62"; + url = "mirror://steamrt/pool/main/libx/libxau/libxau6_1.0.6-4+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxau6.deb"; }; } rec { - name = "libxaw7_1.0.9-3ubuntu1+srt4_amd64"; - sha256 = "15r0f6zhjr13pca7mdxfhk0v48923q0kndp23kpxw8rz75nc15s7"; - url = "mirror://steamrt/pool/main/libx/libxaw/libxaw7_1.0.9-3ubuntu1+srt4_amd64.deb"; + name = "libxaw7_1.0.9-3ubuntu1+srt5_amd64"; + sha256 = "1a15brx602gg6jq708ymngyr3rcbapmk5620wdx094vdclc665g9"; + url = "mirror://steamrt/pool/main/libx/libxaw/libxaw7_1.0.9-3ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxaw7.deb"; }; } rec { - name = "libxcb-composite0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "072z8vwk4gmbnyf5acn6y4rjiidk7rvi1k05za1j5hlqzlydb6x9"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-composite0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-composite0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "0h0yfv4ana590x038lwbz4cxfb3smcqbd394ggir0kv9m1przp78"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-composite0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-composite0.deb"; }; } rec { - name = "libxcb-damage0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "1062g911skvvlvxr6ihxkb0inyg6xg1j4m4k5rfqs333rw4npc2i"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-damage0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-damage0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1431qrr9kg3mdbag9sfdcqy0g84w074k01r2nyr3bq0w5q8px15l"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-damage0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-damage0.deb"; }; } rec { - name = "libxcb-doc_1.10-2ubuntu1+srt4_all"; - sha256 = "0zq3xcrlr2wjp3386bf5h1z63hapmkpnw45l1fz17chdngcmj358"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-doc_1.10-2ubuntu1+srt4_all.deb"; + name = "libxcb-doc_1.11.1-1ubuntu1+steamos1+srt1_all"; + sha256 = "0aly1y78gdv9vkxqgs6ir7sdifn0bvsbflp05x7jmq0zlgpcg0nz"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-doc_1.11.1-1ubuntu1+steamos1+srt1_all.deb"; source = fetchurl { inherit url sha256; name = "libxcb-doc.deb"; }; } rec { - name = "libxcb-dpms0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "1xq6zh8val8mc7wcry0jwdx11aagm4af383c6vs2z6a8vz97c6sj"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-dpms0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-dpms0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1p2hd14zb1zvqkvgs0apc6m2dwh7kwbxv12py10nr6rzmkr75z1k"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-dpms0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-dpms0.deb"; }; } rec { - name = "libxcb-dri2-0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "1kipdyw3wgdywznr5qxbdl85igizc40hwjd3s5f3y5pvd8kprarz"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-dri2-0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-dri2-0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1ixndxxr7ff48p4sp6rim5bjjvncyc2qcld13az56hjybyq90ka1"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-dri2-0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-dri2-0.deb"; }; } rec { - name = "libxcb-dri3-0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "04bqidf71j55qp2b83bfjm26sa62gslidzhzg81knynlqi8kk00q"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-dri3-0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-dri3-0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "0l4j5ydzfnzl5wmabwh8jv2qcdgi5blks8ys06cjri8dq4fqq3gg"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-dri3-0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-dri3-0.deb"; }; } rec { - name = "libxcb-glx0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "03wndp2gkjw016rl6k4jhkcpbs1njg74flnb0ppk30j7nxnxqcm9"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-glx0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-glx0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1shd1g43pq5hqpmxkfp8lykpqzzdn0a0w53m20bkz133jgjwqq1i"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-glx0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-glx0.deb"; }; } rec { - name = "libxcb-present0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "18f38c275h2y9221mn7x0s8ap5fhlry6rdz34lz0rr3pn83fhpvf"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-present0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-present0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1m3xf4vkbk2iwy64y8ak51b8wrd5g8hyfbankvfaf123dyyk8z7x"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-present0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-present0.deb"; }; } rec { - name = "libxcb-randr0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "08c7fx2vc35l7s72f2z02j0wh0b728ibn3zf103jc0yri9pgfinz"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-randr0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-randr0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "047j08nl310s4m8d2gk555bhf1q0s78pq882dqqla2skhfslg645"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-randr0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-randr0.deb"; }; } rec { - name = "libxcb-record0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "1ddr52m5x9ah4j313fvq2ira96l13w8dd4qi0z38llarmrhw2p2y"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-record0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-record0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "0qfh1wnd11z8r9a7zyrvsa4banisvmi3vj5zvihppz2698ln53rv"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-record0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-record0.deb"; }; } rec { - name = "libxcb-render0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "07kyplilgxk0dj9gxk9zdf5l108d8ya9j4j1ji0frn0mk06i45kl"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-render0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-render0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1yj9hxmdjqqinkx8a1gm7nwyxpj6adxphl2f3i863m0gp679bvag"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-render0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-render0.deb"; }; } rec { - name = "libxcb-res0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "0pxpgam9xjzf0m6hrqhl0679qa10qk91ami0p7k899b5b1573j6d"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-res0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-res0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1v8ipbhabg72mc3rf378l0c8x5apndkgjqbvg5qzp4s591w251np"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-res0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-res0.deb"; }; } rec { - name = "libxcb-screensaver0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "1i09z5nszbh9ikjpviwcixayicbq0v9rdg7gygxhs54zxxjccw8y"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-screensaver0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-screensaver0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "04cm77may727miynsqw0937cvs5kjbh85csrdr86yyayvlqygs02"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-screensaver0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-screensaver0.deb"; }; } rec { - name = "libxcb-shape0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "02c87qhymk8ncywaw7zrs73spl1x1byklnafk2drfw76gpf2pa26"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-shape0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-shape0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1z0jlvv25ya5v4rn7cmpwpdbafjmhrb9b7hp6x9nlwrhbpwjh6q2"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-shape0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-shape0.deb"; }; } rec { - name = "libxcb-shm0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "0yzk3yx3c20ms7np2g956m1j3y5xf241gnvpsv37z173a4j7hlhn"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-shm0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-shm0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "0sdajn0sxkvqpy69ccl3l7f7ky4yhj4z304b19wplqfy0qal2gn7"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-shm0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-shm0.deb"; }; } rec { - name = "libxcb-sync1_1.10-2ubuntu1+srt4_amd64"; - sha256 = "1lkch9qhzlx8hpv6msvfa2nd7qqkx6xj86akxwgj1wbl10lbqv47"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-sync1_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-sync1_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1dvq7n1jrsj07hikqvbbbc4wmmk5i9vsvgfcg39vaywmx5fdmfw8"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-sync1_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-sync1.deb"; }; } rec { - name = "libxcb-xevie0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "0f4g04lrbyfjgcphv12zcmsvxa6krjk33kjn4lfdfq3440znvkig"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xevie0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-xevie0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "07qsfdyym47shm3n6m7i9flb339xannxlch2h0i5p9ca2z1a34g2"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xevie0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xevie0.deb"; }; } rec { - name = "libxcb-xf86dri0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "11c6yh1kax9d5qp17znbvll41q953x4ymx5yvhkjx23z6ra8skbb"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xf86dri0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-xf86dri0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "06ha588as5j1njqga4xamfnw79z6y13i596syl0h34pdmsqd2jll"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xf86dri0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xf86dri0.deb"; }; } rec { - name = "libxcb-xfixes0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "0fhprxkv94sgyghcif81dzng5jwyrb6g1y8z78g0wrppjf0k2ixc"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xfixes0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-xfixes0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1npk19k2qhqm89hk2jhf49acig330myvksamd3xw2gjxa99xz7lz"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xfixes0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xfixes0.deb"; }; } rec { - name = "libxcb-xinerama0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "0wbs15dy8zr45d1jqnky6kki6slv150hqlylglva5n0cs2ami0si"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xinerama0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-xinerama0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "0s117w3a3ql7d6k2bp88hzni3k9cg24qcmbqz50z8b1gqhpw9y6b"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xinerama0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xinerama0.deb"; }; } rec { - name = "libxcb-xkb1_1.10-2ubuntu1+srt4_amd64"; - sha256 = "1y6h2awv9h5h09xzhbfr9cd500928knx38ixc28q9v3r0xbw8i8k"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xkb1_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-xkb1_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "0kximpl89ks2simxnz10z836rnvaysys7c2jddhsy1z7z30gpb9h"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xkb1_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xkb1.deb"; }; } rec { - name = "libxcb-xprint0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "0ifmby85fzcazzlw36mliz8ylmbxdxxqbpibzlzn65dj3fmmkmhl"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xprint0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-xprint0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1l2lxnwp129sa268n3xbrifq8yyfn292nz9arqp95za091zj2rri"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xprint0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xprint0.deb"; }; } rec { - name = "libxcb-xtest0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "09ia0zfb63wmr7a7hlgyn5dnq2dv78apkd834150pzbz83yr00vz"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xtest0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-xtest0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1pybcn6rwwg6b4l7a1sn0nxkp2lb5ar9vzwn6ggd8vwrwnppjvq4"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xtest0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xtest0.deb"; }; } rec { - name = "libxcb-xv0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "0r4yhw2h3clkscpxfg9vpl3x7sh89lxrqmddfvz2mwbqxs64i44q"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xv0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-xv0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "13jyd5jkz8wmbz6n7azxdnbw48c9i5zkwysza50d1c3rlxalpq82"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xv0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xv0.deb"; }; } rec { - name = "libxcb-xvmc0_1.10-2ubuntu1+srt4_amd64"; - sha256 = "0fjms3ram2zjg4b6njwqj37dyfw9m39syhw78w0p5q97my4vcrs2"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xvmc0_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb-xvmc0_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "0l4wagp619qar8g9yji1sf4schlclyl1zvdmp3w2cp9lnnwx1p1w"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xvmc0_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xvmc0.deb"; }; } rec { - name = "libxcb1_1.10-2ubuntu1+srt4_amd64"; - sha256 = "18d9armijpdncqv8crz969dgrana0cw6f81di0clqwhx3sgmm29v"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb1_1.10-2ubuntu1+srt4_amd64.deb"; + name = "libxcb1_1.11.1-1ubuntu1+steamos1+srt1_amd64"; + sha256 = "1a8x128bgbz9gy2wsmhijg4di99k18ybs9mwvv37hkpw6mlfaxdx"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb1_1.11.1-1ubuntu1+steamos1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcb1.deb"; }; } rec { - name = "libxcomposite1_0.4.3-2build1+srt4_amd64"; - sha256 = "0xiqwrgsz6dfa0pd9and19gyvmpha8x2sgh5hg3j6kn04cza8523"; - url = "mirror://steamrt/pool/main/libx/libxcomposite/libxcomposite1_0.4.3-2build1+srt4_amd64.deb"; + name = "libxcomposite1_0.4.3-2build1+srt5_amd64"; + sha256 = "01kkvnndzkzqx9pacrlirn435z7dky7lkm0clv7yya3xaw5fslv4"; + url = "mirror://steamrt/pool/main/libx/libxcomposite/libxcomposite1_0.4.3-2build1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcomposite1.deb"; }; } rec { - name = "libxcursor1_1.1.12-1ubuntu0.1+srt4_amd64"; - sha256 = "0zzj3j8k1ci94y3kydyia61crfw31qg4gqj10lih0m86ci5asyyw"; - url = "mirror://steamrt/pool/main/libx/libxcursor/libxcursor1_1.1.12-1ubuntu0.1+srt4_amd64.deb"; + name = "libxcursor1_1.1.12-1ubuntu0.1+srt5_amd64"; + sha256 = "0n9dgdi8hb1w5dpasi2pmm5ysrckfch930yvx9grs026dgz3s2g7"; + url = "mirror://steamrt/pool/main/libx/libxcursor/libxcursor1_1.1.12-1ubuntu0.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxcursor1.deb"; }; } rec { - name = "libxdamage1_1.1.3-2build1+srt4_amd64"; - sha256 = "12bb67z98j857wixl51bjg0mgq59zid69ng5lkdjwl5a7cqjgl0f"; - url = "mirror://steamrt/pool/main/libx/libxdamage/libxdamage1_1.1.3-2build1+srt4_amd64.deb"; + name = "libxdamage1_1.1.3-2build1+srt5_amd64"; + sha256 = "0l088wzpyn15nmy8c6nx3p97qhklxhyaxm8bhafv9sddpr407p4k"; + url = "mirror://steamrt/pool/main/libx/libxdamage/libxdamage1_1.1.3-2build1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxdamage1.deb"; }; } rec { - name = "libxdmcp6_1.1.0-4+srt4_amd64"; - sha256 = "1sw99jdxdafl57y67nssd0ninmiycfgmd8vbi7q3rpp545vc878p"; - url = "mirror://steamrt/pool/main/libx/libxdmcp/libxdmcp6_1.1.0-4+srt4_amd64.deb"; + name = "libxdmcp6_1.1.0-4+srt5_amd64"; + sha256 = "1jx1i0i6vrm6h2sq99f61dix0v8j1f6nq4d2a1hqaw5f1bsra4q7"; + url = "mirror://steamrt/pool/main/libx/libxdmcp/libxdmcp6_1.1.0-4+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxdmcp6.deb"; }; } rec { - name = "libxext6_1.3.0-3ubuntu0.2+steamrt1+srt1_amd64"; - sha256 = "0z9jhx6jplin6fzbj4v11aq3d1wqvy2rb2p3g952kymi9372mnr3"; - url = "mirror://steamrt/pool/main/libx/libxext/libxext6_1.3.0-3ubuntu0.2+steamrt1+srt1_amd64.deb"; + name = "libxext6_1.3.0-3ubuntu0.2+steamrt1+srt2_amd64"; + sha256 = "0ip72ys964g5569rbgsrcv8b1afmwm1mrskgrgiqjs93bhr5i4c4"; + url = "mirror://steamrt/pool/main/libx/libxext/libxext6_1.3.0-3ubuntu0.2+steamrt1+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxext6.deb"; }; } rec { - name = "libxfixes3_5.0-4ubuntu4.4+srt1_amd64"; - sha256 = "0531x9n6p5b9n8isjwmfnr8kmwxyjp81mxrdkmxf6v0k4j0y9sgg"; - url = "mirror://steamrt/pool/main/libx/libxfixes/libxfixes3_5.0-4ubuntu4.4+srt1_amd64.deb"; + name = "libxfixes3_5.0-4ubuntu4.4+srt2_amd64"; + sha256 = "1x2255fch7g2skiz1x94vrm63ahcwf258w2qjkadnbqwivyf8crz"; + url = "mirror://steamrt/pool/main/libx/libxfixes/libxfixes3_5.0-4ubuntu4.4+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxfixes3.deb"; }; } rec { - name = "libxft2_2.2.0-3ubuntu2+srt4_amd64"; - sha256 = "1bipk6d6dw57pdcybbyhvszjad68qckg4i8s9hkn3kn89d2s46bc"; - url = "mirror://steamrt/pool/main/x/xft/libxft2_2.2.0-3ubuntu2+srt4_amd64.deb"; + name = "libxft2_2.2.0-3ubuntu2+srt5_amd64"; + sha256 = "0ylsvvd28qwz442scylrp9gmmp1y6lvyj1bcjd5d4g0fc9iwm37d"; + url = "mirror://steamrt/pool/main/x/xft/libxft2_2.2.0-3ubuntu2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxft2.deb"; }; } rec { - name = "libxi6_1.7.1.901-1ubuntu1~precise3+srt1_amd64"; - sha256 = "0m9h9k5qbqjiay4003v51vbbm9i24j7g3nx6q901csndjk5aq6ss"; - url = "mirror://steamrt/pool/main/libx/libxi/libxi6_1.7.1.901-1ubuntu1~precise3+srt1_amd64.deb"; + name = "libxi6_1.7.1.901-1ubuntu1~precise3+srt2_amd64"; + sha256 = "0g3nazw6w77q91c0dsn040y79d1rmg4njg2n3cv871630zghz6rs"; + url = "mirror://steamrt/pool/main/libx/libxi/libxi6_1.7.1.901-1ubuntu1~precise3+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxi6.deb"; }; } rec { - name = "libxinerama1_1.1.1-3ubuntu0.1+srt4_amd64"; - sha256 = "03dqvmdvcdraw0p483qrqv6xchr6a96vpmbbni6qcdak1gic2xkb"; - url = "mirror://steamrt/pool/main/libx/libxinerama/libxinerama1_1.1.1-3ubuntu0.1+srt4_amd64.deb"; + name = "libxinerama1_1.1.1-3ubuntu0.1+srt5_amd64"; + sha256 = "1icp7syxhfgwpiabl7503ylw66m7z3sq5pn7wkxb2yriqxfj3nmp"; + url = "mirror://steamrt/pool/main/libx/libxinerama/libxinerama1_1.1.1-3ubuntu0.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxinerama1.deb"; }; } rec { - name = "libxml2_2.7.8.dfsg-5.1ubuntu4.14+srt1_amd64"; - sha256 = "0c5acgsr7as7afjwvl6qbqbgn3wpima2k55awgga6prvhzkas60p"; - url = "mirror://steamrt/pool/main/libx/libxml2/libxml2_2.7.8.dfsg-5.1ubuntu4.14+srt1_amd64.deb"; + name = "libxml2_2.7.8.dfsg-5.1ubuntu4.17+srt1_amd64"; + sha256 = "0k5wagjkf60ys0cg639758c1h0cjmziyxvp5597vavbds32sl2hm"; + url = "mirror://steamrt/pool/main/libx/libxml2/libxml2_2.7.8.dfsg-5.1ubuntu4.17+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxml2.deb"; }; } rec { - name = "libxmu6_1.1.0-3+srt4_amd64"; - sha256 = "1l08mkf2kwgskhzh9s43g5vcl4v1qphn68ila8g9gfw05gq7r0j1"; - url = "mirror://steamrt/pool/main/libx/libxmu/libxmu6_1.1.0-3+srt4_amd64.deb"; + name = "libxmu6_1.1.0-3+srt5_amd64"; + sha256 = "0pabx6pyazssqfs775k4l19frqv20225n7jmr1ncvwfikiw48gsl"; + url = "mirror://steamrt/pool/main/libx/libxmu/libxmu6_1.1.0-3+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxmu6.deb"; }; } rec { - name = "libxpm4_3.5.9-4+srt4_amd64"; - sha256 = "1z72sbc802sanhagf0w26hkk3yw0zdahw7dk89hjcgp57qmyyb08"; - url = "mirror://steamrt/pool/main/libx/libxpm/libxpm4_3.5.9-4+srt4_amd64.deb"; + name = "libxpm4_3.5.9-4+steamrt1.1ubuntu0.1+srt1_amd64"; + sha256 = "0nv7v30mh3j53h7lcvqm2ixnsbn8328vcfbd2ysx2r2fac9waw7j"; + url = "mirror://steamrt/pool/main/libx/libxpm/libxpm4_3.5.9-4+steamrt1.1ubuntu0.1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxpm4.deb"; }; } rec { - name = "libxrandr2_1.3.2-2ubuntu0.3+srt1_amd64"; - sha256 = "1yqfa0nllfqk9rnwj65nx8ni5xy4pn2nfasbkhzs8cfcyfd96y4x"; - url = "mirror://steamrt/pool/main/libx/libxrandr/libxrandr2_1.3.2-2ubuntu0.3+srt1_amd64.deb"; + name = "libxrandr2_1.5.0-1+srt1_amd64"; + sha256 = "1i55vzgaalxlm0mgi7c52nmpmksyffbf93isg3i2syg5nzain8v2"; + url = "mirror://steamrt/pool/main/libx/libxrandr/libxrandr2_1.5.0-1+srt1_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxrandr2.deb"; }; } rec { - name = "libxrender1_0.9.6-2ubuntu0.2+srt1_amd64"; - sha256 = "06v7qfp10gfzx04znksc1mhx5a90za29hi90vinjrzccv096ak99"; - url = "mirror://steamrt/pool/main/libx/libxrender/libxrender1_0.9.6-2ubuntu0.2+srt1_amd64.deb"; + name = "libxrender1_0.9.6-2ubuntu0.2+srt2_amd64"; + sha256 = "0zd4kd5235vn575msfgl48j4czfp4fc44y439gcclpadkhvciviz"; + url = "mirror://steamrt/pool/main/libx/libxrender/libxrender1_0.9.6-2ubuntu0.2+srt2_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxrender1.deb"; }; } rec { - name = "libxss1_1.2.1-2+srt4_amd64"; - sha256 = "0w0idnk6i94klavy80bv83pvkg2m8qvjaa9w641995r6drm9nag7"; - url = "mirror://steamrt/pool/main/libx/libxss/libxss1_1.2.1-2+srt4_amd64.deb"; + name = "libxss1_1.2.1-2+srt5_amd64"; + sha256 = "1k7248hb63ml79nqzij65rmg8x0ayi41zpl9ls6my87a6gzswyhr"; + url = "mirror://steamrt/pool/main/libx/libxss/libxss1_1.2.1-2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxss1.deb"; }; } rec { - name = "libxt6_1.1.1-2ubuntu0.1+srt4_amd64"; - sha256 = "1blcs2ngp6k5g87y10f2wgshr7m44943ks1ykpb59ss1w5j6cmx6"; - url = "mirror://steamrt/pool/main/libx/libxt/libxt6_1.1.1-2ubuntu0.1+srt4_amd64.deb"; + name = "libxt6_1.1.1-2ubuntu0.1+srt5_amd64"; + sha256 = "0gd81vk2bzjc9zcdbgj57hwhs6v9dmzajrmngmaxavyzv2fgamka"; + url = "mirror://steamrt/pool/main/libx/libxt/libxt6_1.1.1-2ubuntu0.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxt6.deb"; }; } rec { - name = "libxtst6_1.2.0-4ubuntu0.1+srt4_amd64"; - sha256 = "0mff4swa68mldsv915hirllccybbgjn3i4j23bj4bf26hasr0m6x"; - url = "mirror://steamrt/pool/main/libx/libxtst/libxtst6_1.2.0-4ubuntu0.1+srt4_amd64.deb"; + name = "libxtst6_1.2.0-4ubuntu0.1+srt5_amd64"; + sha256 = "1l1l2073b9cd76ckn5f2d4qb4w1k48s0dlki93bfikph8ms6px8d"; + url = "mirror://steamrt/pool/main/libx/libxtst/libxtst6_1.2.0-4ubuntu0.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxtst6.deb"; }; } rec { - name = "libxxf86vm1_1.1.1-2ubuntu0.1+srt4_amd64"; - sha256 = "0ahk7z05sshj649vanr2hvarwqp3aphqwbdzf3hjd5rb9cg061fm"; - url = "mirror://steamrt/pool/main/libx/libxxf86vm/libxxf86vm1_1.1.1-2ubuntu0.1+srt4_amd64.deb"; + name = "libxxf86vm1_1.1.1-2ubuntu0.1+srt5_amd64"; + sha256 = "1diqhhj91knlz02b6ha940091yjris46d5swy3zi3r389w2b2crm"; + url = "mirror://steamrt/pool/main/libx/libxxf86vm/libxxf86vm1_1.1.1-2ubuntu0.1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "libxxf86vm1.deb"; }; } rec { - name = "nvidia-cg-toolkit_3.0.0016-0ubuntu1+srt4_amd64"; - sha256 = "1sgjxdgx8fd780imrqwiwqlhwlmgrndam8km9visymcr431yjbnb"; - url = "mirror://steamrt/pool/main/n/nvidia-cg-toolkit/nvidia-cg-toolkit_3.0.0016-0ubuntu1+srt4_amd64.deb"; + name = "nvidia-cg-toolkit_3.0.0016-0ubuntu1+srt5_amd64"; + sha256 = "0cr24gybxz7h8s9rijr75dayahy1kx4i6gn5q2q6h4z29v046nc4"; + url = "mirror://steamrt/pool/main/n/nvidia-cg-toolkit/nvidia-cg-toolkit_3.0.0016-0ubuntu1+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "nvidia-cg-toolkit.deb"; }; } rec { - name = "zenity_3.4.0-0ubuntu4+steamrt2+srt4_amd64"; - sha256 = "12csbx3bzziygw2xa0w4d0i3gh7l2h1sc93npvsmqnjxs6qmwnnz"; - url = "mirror://steamrt/pool/main/z/zenity/zenity_3.4.0-0ubuntu4+steamrt2+srt4_amd64.deb"; + name = "zenity_3.4.0-0ubuntu4+steamrt2+srt5_amd64"; + sha256 = "0ajisfqvlajw0m6kq3yv8j6f38dfhlavrmmfdq5yqmb70wmmkk71"; + url = "mirror://steamrt/pool/main/z/zenity/zenity_3.4.0-0ubuntu4+steamrt2+srt5_amd64.deb"; source = fetchurl { inherit url sha256; name = "zenity.deb"; }; } rec { - name = "zlib1g_1.2.3.4.dfsg-3ubuntu4+srt4_amd64"; - sha256 = "06l2s654sg4z16g2b1whrjkz2gwqd0mjgf9w3jzvwwdbprc71gmg"; - url = "mirror://steamrt/pool/main/z/zlib/zlib1g_1.2.3.4.dfsg-3ubuntu4+srt4_amd64.deb"; + name = "zlib1g_1.2.3.4.dfsg-3ubuntu4+srt6_amd64"; + sha256 = "0962hhdg3knxnjinkv7m3h510fq8vghjyaxnsnsyijqzfawi4rfj"; + url = "mirror://steamrt/pool/main/z/zlib/zlib1g_1.2.3.4.dfsg-3ubuntu4+srt6_amd64.deb"; source = fetchurl { inherit url sha256; name = "zlib1g.deb"; @@ -1752,1746 +1743,1737 @@ ]; i386 = [ rec { - name = "dconf-gsettings-backend_0.12.0-0ubuntu1.1+srt4_i386"; - sha256 = "0i6phg3gmiqx4in4ym5iv3l15x396d0gkrs57x5p7mw8ahb5fq7q"; - url = "mirror://steamrt/pool/main/d/d-conf/dconf-gsettings-backend_0.12.0-0ubuntu1.1+srt4_i386.deb"; + name = "dconf-gsettings-backend_0.12.0-0ubuntu1.1+srt5_i386"; + sha256 = "1899b2x8kfallda1i0m1hph7v088q7px0rpxm8w6qwp5mwqy4rip"; + url = "mirror://steamrt/pool/main/d/d-conf/dconf-gsettings-backend_0.12.0-0ubuntu1.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "dconf-gsettings-backend.deb"; }; } rec { - name = "freeglut3_2.6.0-1ubuntu3+srt4_i386"; - sha256 = "1vsm25lzylxf4mvqs5p171qrl8aspdi5rvlnpfhc35cx3vhkxg79"; - url = "mirror://steamrt/pool/main/f/freeglut/freeglut3_2.6.0-1ubuntu3+srt4_i386.deb"; + name = "freeglut3_2.6.0-1ubuntu3+srt5_i386"; + sha256 = "0jdn9nvjmhphv9iw1h589cy5q1iq0gp9q4ibm0m69lkazi2v1blb"; + url = "mirror://steamrt/pool/main/f/freeglut/freeglut3_2.6.0-1ubuntu3+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "freeglut3.deb"; }; } rec { - name = "gcc-4.6-base_4.6.3-1ubuntu5+srt4_i386"; - sha256 = "1s7wvx23xnv3i3mw6a2pk9nr9s9wzpc99cr6rzgq3jxfmph78c4r"; - url = "mirror://steamrt/pool/main/g/gcc-4.6/gcc-4.6-base_4.6.3-1ubuntu5+srt4_i386.deb"; + name = "gcc-4.6-base_4.6.3-1ubuntu5+steamrt1.1+srt1_i386"; + sha256 = "0zsb0kn2kn64hvf33xnp94k5i9c1269qyla8p5q8vzwplcl0qrx9"; + url = "mirror://steamrt/pool/main/g/gcc-4.6/gcc-4.6-base_4.6.3-1ubuntu5+steamrt1.1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "gcc-4.6-base.deb"; }; } rec { - name = "gtk2-engines_2.20.2-1ubuntu1+srt4_i386"; - sha256 = "0rlhcsx8lvnmd6hx4iqh6z49jqxb2wlzl8n74qcbkx8vzg3jyffn"; - url = "mirror://steamrt/pool/main/g/gtk2-engines/gtk2-engines_2.20.2-1ubuntu1+srt4_i386.deb"; + name = "gtk2-engines_2.20.2-1ubuntu1+srt5_i386"; + sha256 = "06h5229y2md6d73imgy5wg4msv6s9vl056p97jq2hrf4di0q6a76"; + url = "mirror://steamrt/pool/main/g/gtk2-engines/gtk2-engines_2.20.2-1ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "gtk2-engines.deb"; }; } rec { - name = "gtk2-engines-murrine_0.98.2-0ubuntu1+srt4_i386"; - sha256 = "1jkma0v5z7i7plamg49ljk0mhg3qf92k1disdj8yjjlgjf3d0isl"; - url = "mirror://steamrt/pool/main/g/gtk2-engines-murrine/gtk2-engines-murrine_0.98.2-0ubuntu1+srt4_i386.deb"; + name = "gtk2-engines-murrine_0.98.2-0ubuntu1+srt5_i386"; + sha256 = "1fyha082h0jr26gjnsxzj1c6rl63c9xc2kgf6cfb86dmsmbvpqqg"; + url = "mirror://steamrt/pool/main/g/gtk2-engines-murrine/gtk2-engines-murrine_0.98.2-0ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "gtk2-engines-murrine.deb"; }; } rec { - name = "gtk2-engines-pixbuf_2.24.10-0ubuntu6+steamrt1+srt4_i386"; - sha256 = "00p0qi47nnzlh31ajwalfh5kimsmdzjicgl5lnfg4viwb0r07vmd"; - url = "mirror://steamrt/pool/main/g/gtk+2.0/gtk2-engines-pixbuf_2.24.10-0ubuntu6+steamrt1+srt4_i386.deb"; + name = "gtk2-engines-pixbuf_2.24.10-0ubuntu6+steamrt1+srt5_i386"; + sha256 = "0ix60pix5cnzd807v8q9mqhyhhksqndd7vc6brs1daknhxn5dsi4"; + url = "mirror://steamrt/pool/main/g/gtk+2.0/gtk2-engines-pixbuf_2.24.10-0ubuntu6+steamrt1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "gtk2-engines-pixbuf.deb"; }; } rec { - name = "libacl1_2.2.51-5ubuntu1+srt6_i386"; - sha256 = "188r323k4y6jvq64qywhglllxfbcpji15zvws1qlicv4nrjh2yk2"; - url = "mirror://steamrt/pool/main/a/acl/libacl1_2.2.51-5ubuntu1+srt6_i386.deb"; + name = "libacl1_2.2.51-5ubuntu1+srt7_i386"; + sha256 = "0x6959ivq4v8x9yd38c7kfvds9g3h00znim03dm5rvl7xl2k0cxn"; + url = "mirror://steamrt/pool/main/a/acl/libacl1_2.2.51-5ubuntu1+srt7_i386.deb"; source = fetchurl { inherit url sha256; name = "libacl1.deb"; }; } rec { - name = "libappindicator1_0.4.92-0ubuntu1+steamrt1+srt5_i386"; - sha256 = "049qhih0dl0z13ag1kradvwydwz90pllwriwnyjx78726fvcsa56"; - url = "mirror://steamrt/pool/main/liba/libappindicator/libappindicator1_0.4.92-0ubuntu1+steamrt1+srt5_i386.deb"; + name = "libappindicator1_0.4.92-0ubuntu1.1+steamrt1+srt1_i386"; + sha256 = "1bbf9k50d3df4sjn2idizk2bcpkcxkg0wz8mczgzkh634753pkld"; + url = "mirror://steamrt/pool/main/liba/libappindicator/libappindicator1_0.4.92-0ubuntu1.1+steamrt1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libappindicator1.deb"; }; } rec { - name = "libasn1-8-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386"; - sha256 = "0gp2falswr4hfcrfj7avp1g216mf5sargqflwyxl6ixxy1yxp22w"; - url = "mirror://steamrt/pool/main/h/heimdal/libasn1-8-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386.deb"; + name = "libasn1-8-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386"; + sha256 = "1qgap0ha5vlpz1fnf2fppprzh4lyrvy7k9sj0whhb3f48ass8mh5"; + url = "mirror://steamrt/pool/main/h/heimdal/libasn1-8-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libasn1-8-heimdal.deb"; }; } rec { - name = "libasound2_1.1.0-0ubuntu1+steamos1+srt1_i386"; - sha256 = "0cy9s4wpnq2yd08shvip5mzg5a5mk76zmwyq68brqblaf1yqw907"; - url = "mirror://steamrt/pool/main/a/alsa-lib/libasound2_1.1.0-0ubuntu1+steamos1+srt1_i386.deb"; + name = "libasound2_1.1.0-0ubuntu1+steamos1+srt2_i386"; + sha256 = "0wa019012di6slf29ambq249fn6w9ldmyxx80k564j9s1k510ivc"; + url = "mirror://steamrt/pool/main/a/alsa-lib/libasound2_1.1.0-0ubuntu1+steamos1+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libasound2.deb"; }; } rec { - name = "libasound2-plugins_1.1.0-0ubuntu1+srt1_i386"; - sha256 = "10qhsgcsabp0mrihssj7znw67kjfmw9kv2sbplpwl8bc52pxdz6z"; - url = "mirror://steamrt/pool/main/a/alsa-plugins/libasound2-plugins_1.1.0-0ubuntu1+srt1_i386.deb"; + name = "libasound2-plugins_1.1.0-0ubuntu1+srt2_i386"; + sha256 = "0hrrpjp4wg13vfam863hwkhzv7ngcydx0iysmfkxjzhmpf3j4ghd"; + url = "mirror://steamrt/pool/main/a/alsa-plugins/libasound2-plugins_1.1.0-0ubuntu1+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libasound2-plugins.deb"; }; } rec { - name = "libasyncns0_0.8-4+srt4_i386"; - sha256 = "1h2fs8azxz9z2wa45igxwvfaarp50pqx26jznyrv35ayxhnzsg8w"; - url = "mirror://steamrt/pool/main/liba/libasyncns/libasyncns0_0.8-4+srt4_i386.deb"; + name = "libasyncns0_0.8-4+srt5_i386"; + sha256 = "0k8rngiq74b574fc1jqfwf77f57qcflimbs63pa2jx1jqg7gxjx2"; + url = "mirror://steamrt/pool/main/liba/libasyncns/libasyncns0_0.8-4+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libasyncns0.deb"; }; } rec { - name = "libatk1.0-0_2.4.0-0ubuntu1+srt4_i386"; - sha256 = "08sbk32cv4r0nmhp8ydbmjy8mcnsi4y2wjm606d1hrqqnvhlk1yi"; - url = "mirror://steamrt/pool/main/a/atk1.0/libatk1.0-0_2.4.0-0ubuntu1+srt4_i386.deb"; + name = "libatk1.0-0_2.18.0-1+steamrt1+srt1_i386"; + sha256 = "0ldl3jsmf16mbf1bs94zkmaa1b1p9d9rvajlyp7iqkbqw6qkszlz"; + url = "mirror://steamrt/pool/main/a/atk1.0/libatk1.0-0_2.18.0-1+steamrt1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libatk1.0-0.deb"; }; } rec { - name = "libattr1_2.4.46-5ubuntu1+srt4_i386"; - sha256 = "06ms0pfsb85y53l83fvs2zh39dqzh7bw0jh6zsf5wi9g47y2kzhd"; - url = "mirror://steamrt/pool/main/a/attr/libattr1_2.4.46-5ubuntu1+srt4_i386.deb"; + name = "libattr1_2.4.46-5ubuntu1+steamrt1+srt1_i386"; + sha256 = "1iyy60mpc6radds5rh9i6m8bmfa168y7dqbnz3jvgps5zndri363"; + url = "mirror://steamrt/pool/main/a/attr/libattr1_2.4.46-5ubuntu1+steamrt1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libattr1.deb"; }; } rec { - name = "libavahi-client3_0.6.30-5ubuntu2+srt4_i386"; - sha256 = "0gsbwnc5s6hd412djs257fgy50ayjph5gg1jhmvgz0nf0wqqy60g"; - url = "mirror://steamrt/pool/main/a/avahi/libavahi-client3_0.6.30-5ubuntu2+srt4_i386.deb"; + name = "libavahi-client3_0.6.30-5ubuntu2.2+srt1_i386"; + sha256 = "1yyq436zsx8hbfhhv4l8ji85narl6ws8flhfcbqvxldaxlzv4ls7"; + url = "mirror://steamrt/pool/main/a/avahi/libavahi-client3_0.6.30-5ubuntu2.2+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libavahi-client3.deb"; }; } rec { - name = "libavahi-common3_0.6.30-5ubuntu2+srt4_i386"; - sha256 = "0cfn660pngq7ackkcid410g8245grcs0izawwlmkhr6y19nma0jg"; - url = "mirror://steamrt/pool/main/a/avahi/libavahi-common3_0.6.30-5ubuntu2+srt4_i386.deb"; + name = "libavahi-common3_0.6.30-5ubuntu2.2+srt1_i386"; + sha256 = "0lhvj64i4dqy0lh73kyk32992fqkhxxr7k1cr97a03hdpaa06ycq"; + url = "mirror://steamrt/pool/main/a/avahi/libavahi-common3_0.6.30-5ubuntu2.2+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libavahi-common3.deb"; }; } rec { - name = "libavcodec53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_i386"; - sha256 = "0dz4d63whrhlsylvd1mqzz5v3xpwf88cgga8qr8vgf2vaz7ns0k1"; - url = "mirror://steamrt/pool/main/liba/libav/libavcodec53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_i386.deb"; + name = "libavcodec53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_i386"; + sha256 = "129g8jgy4va5gszrq9pxd4p51zja9svcm0hqx8g12ryx5lfkjjc5"; + url = "mirror://steamrt/pool/main/liba/libav/libavcodec53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libavcodec53.deb"; }; } rec { - name = "libavfilter2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_i386"; - sha256 = "1rxbm4n09q4brhklaa5hwzaipv3y34a3jphrc724s29dg178bb6y"; - url = "mirror://steamrt/pool/main/liba/libav/libavfilter2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_i386.deb"; + name = "libavfilter2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_i386"; + sha256 = "1vnj97sl686wlkkxbhvn5s3ck60nzrqr60y4wxg9a2hxxf7ba1gf"; + url = "mirror://steamrt/pool/main/liba/libav/libavfilter2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libavfilter2.deb"; }; } rec { - name = "libavformat53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_i386"; - sha256 = "0f38h7h4m1g63jh9lsnq9win2k5zvg8i5khsadwb154y4iragm2f"; - url = "mirror://steamrt/pool/main/liba/libav/libavformat53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_i386.deb"; + name = "libavformat53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_i386"; + sha256 = "12zikl29fcq5vc0k5n4l8db8q0f95h13hlqgka3cy13nf31kbk06"; + url = "mirror://steamrt/pool/main/liba/libav/libavformat53_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libavformat53.deb"; }; } rec { - name = "libavutil51_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_i386"; - sha256 = "05lh422gvhl990yvlp4a0l3mfqn4n0l41fdaq4m4r5i23izcl3s0"; - url = "mirror://steamrt/pool/main/liba/libav/libavutil51_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_i386.deb"; + name = "libavutil51_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_i386"; + sha256 = "1brfvbqwga1hmmyarbwksbrj6kabnfnrk8hv9xrvd99jak3wsipl"; + url = "mirror://steamrt/pool/main/liba/libav/libavutil51_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libavutil51.deb"; }; } rec { - name = "libbz2-1.0_1.0.6-1+srt4_i386"; - sha256 = "1hh77sg2pan5qlvxg82my0h1dy53rxrgnl84bggn2kiz9i61ls2m"; - url = "mirror://steamrt/pool/main/b/bzip2/libbz2-1.0_1.0.6-1+srt4_i386.deb"; + name = "libbz2-1.0_1.0.6-1+srt5_i386"; + sha256 = "1nngc07hwr96n1k56bi3i2yffad8dhf1zfblqlz8pffi1yl92vjz"; + url = "mirror://steamrt/pool/main/b/bzip2/libbz2-1.0_1.0.6-1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libbz2-1.0.deb"; }; } rec { - name = "libcairo2_1.10.2-6.1ubuntu3+srt4_i386"; - sha256 = "141rbp47gkvzfqzrwg4j80m1ay2l573p4q3x2ym5nxzw3f9jb00a"; - url = "mirror://steamrt/pool/main/c/cairo/libcairo2_1.10.2-6.1ubuntu3+srt4_i386.deb"; + name = "libcairo2_1.10.2-6.1ubuntu3+srt5_i386"; + sha256 = "0vnz2d66q9pkn8ry2ixbmqcyz0kpqqmimaxnrfq42g1lz8k44cs6"; + url = "mirror://steamrt/pool/main/c/cairo/libcairo2_1.10.2-6.1ubuntu3+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libcairo2.deb"; }; } rec { - name = "libcanberra-gtk-module_0.28-3ubuntu3+steamrt1+srt4_i386"; - sha256 = "1mfv3q731b0sjl2axc5qf1drp4dfwsmg2i0c222bs3ccvk9m7bcr"; - url = "mirror://steamrt/pool/main/libc/libcanberra/libcanberra-gtk-module_0.28-3ubuntu3+steamrt1+srt4_i386.deb"; + name = "libcanberra-gtk-module_0.28-3ubuntu3+steamrt1+srt5_i386"; + sha256 = "10bw3fha2nc8lb3md5l8yj8c40rx7gm7vg9lk76359p06z3ypvvf"; + url = "mirror://steamrt/pool/main/libc/libcanberra/libcanberra-gtk-module_0.28-3ubuntu3+steamrt1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libcanberra-gtk-module.deb"; }; } rec { - name = "libcanberra-gtk0_0.28-3ubuntu3+steamrt1+srt4_i386"; - sha256 = "0iddn7f56g1lajd1f0s77s06qwh5nk0iv2ai2r5rcanhq693k3jp"; - url = "mirror://steamrt/pool/main/libc/libcanberra/libcanberra-gtk0_0.28-3ubuntu3+steamrt1+srt4_i386.deb"; + name = "libcanberra-gtk0_0.28-3ubuntu3+steamrt1+srt5_i386"; + sha256 = "1yg1hllxp2m5rv6hlgh714yhcb9l5ggg4lfwv33yaw4fnzz387km"; + url = "mirror://steamrt/pool/main/libc/libcanberra/libcanberra-gtk0_0.28-3ubuntu3+steamrt1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libcanberra-gtk0.deb"; }; } rec { - name = "libcanberra0_0.28-3ubuntu3+steamrt1+srt4_i386"; - sha256 = "0qpil9xifaq1kkmrga6v9sz4sl9dh78rp9kzm8p6c9hq2f4w5j4i"; - url = "mirror://steamrt/pool/main/libc/libcanberra/libcanberra0_0.28-3ubuntu3+steamrt1+srt4_i386.deb"; + name = "libcanberra0_0.28-3ubuntu3+steamrt1+srt5_i386"; + sha256 = "03b6rk9gkxx4d75cjr27w229nsc1jjp2fy8ln5gxp2bbhywgxl4a"; + url = "mirror://steamrt/pool/main/libc/libcanberra/libcanberra0_0.28-3ubuntu3+steamrt1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libcanberra0.deb"; }; } rec { - name = "libcap2_2.22-1ubuntu3+srt4_i386"; - sha256 = "0llaf4hgb4v66hwkc6ibrhpadhjxkiz3frl00f6yagm9g6z2yxvy"; - url = "mirror://steamrt/pool/main/libc/libcap2/libcap2_2.22-1ubuntu3+srt4_i386.deb"; + name = "libcap2_2.22-1ubuntu3+srt5_i386"; + sha256 = "1qy9ggswl8cbp0zbaryc7cd4bcq17qb4llv8v3zcj08wxr6v2ram"; + url = "mirror://steamrt/pool/main/libc/libcap2/libcap2_2.22-1ubuntu3+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libcap2.deb"; }; } rec { - name = "libcg_3.0.0016-0ubuntu1+srt4_i386"; - sha256 = "0ka9z2sq315xvdbqmbqg76j3wknfa88hk41jg94svnqf4fbawbrz"; - url = "mirror://steamrt/pool/main/n/nvidia-cg-toolkit/libcg_3.0.0016-0ubuntu1+srt4_i386.deb"; + name = "libcg_3.0.0016-0ubuntu1+srt5_i386"; + sha256 = "0gs2q5ql7wq28y2qrs9v9gs75r6ycq7c6xghf4s6g5s8q4cq205k"; + url = "mirror://steamrt/pool/main/n/nvidia-cg-toolkit/libcg_3.0.0016-0ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libcg.deb"; }; } rec { - name = "libcomerr2_1.42-1ubuntu2.2+srt1_i386"; - sha256 = "0d0zpm7qx1p4zpi5xk585hxfirn6i3v53r0br7dlaiqfy0divv5z"; - url = "mirror://steamrt/pool/main/e/e2fsprogs/libcomerr2_1.42-1ubuntu2.2+srt1_i386.deb"; + name = "libcomerr2_1.42-1ubuntu2.3+srt1_i386"; + sha256 = "12c8gxi0l0qysbiw81hbysf5hn1kgv956csvrn71yf52zwqwr388"; + url = "mirror://steamrt/pool/main/e/e2fsprogs/libcomerr2_1.42-1ubuntu2.3+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libcomerr2.deb"; }; } rec { - name = "libcups2_1.5.3-0ubuntu8.2+steamrt1+srt3_i386"; - sha256 = "1l49h8v8dgi4n2j32012zzxkyqgg7b9z7d9lxijj0cqwwjq6fzpx"; - url = "mirror://steamrt/pool/main/c/cups/libcups2_1.5.3-0ubuntu8.2+steamrt1+srt3_i386.deb"; + name = "libcups2_1.5.3-0ubuntu8.2+steamrt1+srt4_i386"; + sha256 = "03x40p961apv96y59dabvp50s3jryccx2yqrw9i3dbflxvja5rbz"; + url = "mirror://steamrt/pool/main/c/cups/libcups2_1.5.3-0ubuntu8.2+steamrt1+srt4_i386.deb"; source = fetchurl { inherit url sha256; name = "libcups2.deb"; }; } rec { - name = "libcurl3_7.22.0-3ubuntu4.8+steamrt2+srt5_i386"; - sha256 = "0z5qnjgmz9c917vm6r1m3856a10brdwx3d0k4qcv9vlv1gj1ln0j"; - url = "mirror://steamrt/pool/main/c/curl/libcurl3_7.22.0-3ubuntu4.8+steamrt2+srt5_i386.deb"; + name = "libcurl3_7.22.0-3ubuntu4.17+srt1_i386"; + sha256 = "14yb0a5cglgqvwa75kb6lbhfpmpj4xjgxz6dm27q27pcxv9xx5km"; + url = "mirror://steamrt/pool/main/c/curl/libcurl3_7.22.0-3ubuntu4.17+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libcurl3.deb"; }; } rec { - name = "libcurl3-gnutls_7.22.0-3ubuntu4.8+steamrt2+srt5_i386"; - sha256 = "09bx2gxldswb63nql2b7x5mq55miaz7x5gbzscrc1kybnm0vvv75"; - url = "mirror://steamrt/pool/main/c/curl/libcurl3-gnutls_7.22.0-3ubuntu4.8+steamrt2+srt5_i386.deb"; + name = "libcurl3-gnutls_7.22.0-3ubuntu4.17+srt1_i386"; + sha256 = "027dgd9ik9zxy2ixi1272mskbax10cg0k7flljhcx5zmnwvrhxhx"; + url = "mirror://steamrt/pool/main/c/curl/libcurl3-gnutls_7.22.0-3ubuntu4.17+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libcurl3-gnutls.deb"; }; } rec { - name = "libdbus-1-3_1.4.18-1ubuntu1.7+srt1_i386"; - sha256 = "1lp548l33i3c7wavq9q0n9jhxm44mg0jlrgi89ngfm705141zw4f"; - url = "mirror://steamrt/pool/main/d/dbus/libdbus-1-3_1.4.18-1ubuntu1.7+srt1_i386.deb"; + name = "libdbus-1-3_1.4.18-1ubuntu1.8+srt1_i386"; + sha256 = "1m8aqb9hvprl0hbswha0raz6pp3gs84cmqg40fblbfqya8nibdlk"; + url = "mirror://steamrt/pool/main/d/dbus/libdbus-1-3_1.4.18-1ubuntu1.8+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libdbus-1-3.deb"; }; } rec { - name = "libdbus-glib-1-2_0.98-1ubuntu1.1+srt4_i386"; - sha256 = "13dcsf3ipayvrzj1ksmxph31gk2zs3m0ghy5jh3aq648s5ql2jj9"; - url = "mirror://steamrt/pool/main/d/dbus-glib/libdbus-glib-1-2_0.98-1ubuntu1.1+srt4_i386.deb"; + name = "libdbus-glib-1-2_0.98-1ubuntu1.1+srt5_i386"; + sha256 = "0slsk7cqdrbnm35zqir21ms0vv1hv44i184x8ip1lg936vrvbxka"; + url = "mirror://steamrt/pool/main/d/dbus-glib/libdbus-glib-1-2_0.98-1ubuntu1.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libdbus-glib-1-2.deb"; }; } rec { - name = "libdbusmenu-glib4_0.6.2-0ubuntu0.1+srt4_i386"; - sha256 = "14glmvc6923djpcn2a9kwhqm4myg1y9mp38n7gkby1wz6y63zvp5"; - url = "mirror://steamrt/pool/main/libd/libdbusmenu/libdbusmenu-glib4_0.6.2-0ubuntu0.1+srt4_i386.deb"; + name = "libdbusmenu-glib4_0.6.2-0ubuntu0.1+srt5_i386"; + sha256 = "0g4zmrwpifl4kxv311spwyia1xrd76m0aizb3jzv6q8cc4hla3ii"; + url = "mirror://steamrt/pool/main/libd/libdbusmenu/libdbusmenu-glib4_0.6.2-0ubuntu0.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libdbusmenu-glib4.deb"; }; } rec { - name = "libdbusmenu-gtk4_0.6.2-0ubuntu0.1+srt4_i386"; - sha256 = "19ijz82wkk9z8w4yjp628hga6dsv7qr7x37kr8j8fq430gbl5y8s"; - url = "mirror://steamrt/pool/main/libd/libdbusmenu/libdbusmenu-gtk4_0.6.2-0ubuntu0.1+srt4_i386.deb"; + name = "libdbusmenu-gtk4_0.6.2-0ubuntu0.1+srt5_i386"; + sha256 = "0kj6pfpgybkkb5bjfr9qgczwddx5lkbwhknlcymhhi94jcfbcnbc"; + url = "mirror://steamrt/pool/main/libd/libdbusmenu/libdbusmenu-gtk4_0.6.2-0ubuntu0.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libdbusmenu-gtk4.deb"; }; } rec { - name = "libexif12_0.6.20-2ubuntu0.1+srt4_i386"; - sha256 = "1dh1idpqqh66l2awfim17vk94238wb073d3xj74ci8gxfp0rxkvr"; - url = "mirror://steamrt/pool/main/libe/libexif/libexif12_0.6.20-2ubuntu0.1+srt4_i386.deb"; + name = "libexif12_0.6.20-2ubuntu0.1+srt5_i386"; + sha256 = "06br49sn30hrxlq479xi3vxw3blkr558kz4d7gym3fxnwfa6im9w"; + url = "mirror://steamrt/pool/main/libe/libexif/libexif12_0.6.20-2ubuntu0.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libexif12.deb"; }; } rec { - name = "libexpat1_2.0.1-7.2ubuntu1.2+srt1_i386"; - sha256 = "0wv8iym5bhwlvnsljxfjwhl8z39wh5nba6li1i7nnzqj365hmdc4"; - url = "mirror://steamrt/pool/main/e/expat/libexpat1_2.0.1-7.2ubuntu1.2+srt1_i386.deb"; + name = "libexpat1_2.0.1-7.2ubuntu1.4+srt2_i386"; + sha256 = "0av7wcy104jz6pci7lgwpmvb528v9idx660qrrabdqhpd1m4hv8s"; + url = "mirror://steamrt/pool/main/e/expat/libexpat1_2.0.1-7.2ubuntu1.4+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libexpat1.deb"; }; } rec { - name = "libffi6_3.0.11~rc1-5+srt4_i386"; - sha256 = "1064kf252d1v8asi59m67bz7zg2k7fmgkqzbib872yb6qyrgj7p2"; - url = "mirror://steamrt/pool/main/libf/libffi/libffi6_3.0.11~rc1-5+srt4_i386.deb"; + name = "libffi6_3.0.11~rc1-5+srt5_i386"; + sha256 = "0gvhndr5y4zl097h105fr4q60sg38mhkhlw8ha51ypzcm9f8na6d"; + url = "mirror://steamrt/pool/main/libf/libffi/libffi6_3.0.11~rc1-5+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libffi6.deb"; }; } rec { - name = "libflac8_1.2.1-6+srt4_i386"; - sha256 = "17hb02f5yapkfkasamx6whxm76p1gpjrz7nq7i59zv0lfxwgjry7"; - url = "mirror://steamrt/pool/main/f/flac/libflac8_1.2.1-6+srt4_i386.deb"; + name = "libflac8_1.2.1-6+steamrt1.1ubuntu0.1+srt1_i386"; + sha256 = "1rdfykm113vps893xdkcrpphb06winv2566yb9myg9m3aybcldrx"; + url = "mirror://steamrt/pool/main/f/flac/libflac8_1.2.1-6+steamrt1.1ubuntu0.1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libflac8.deb"; }; } rec { - name = "libfltk1.1_1.1.10-10+srt4_i386"; - sha256 = "1vz2b02asscpr155v516zclawfi28m4yxf1ya33848ydg067iz35"; - url = "mirror://steamrt/pool/main/f/fltk1.1/libfltk1.1_1.1.10-10+srt4_i386.deb"; + name = "libfltk1.1_1.1.10-10+srt5_i386"; + sha256 = "1j0bhpgsaw6rphy1wqp40wn8yr6qzrxdmwarc2amryqw7bqslmy5"; + url = "mirror://steamrt/pool/main/f/fltk1.1/libfltk1.1_1.1.10-10+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libfltk1.1.deb"; }; } rec { - name = "libfontconfig1_2.8.0-3ubuntu9.1+srt4_i386"; - sha256 = "1dm12wk4pj2h4y0ykyvv9fs6s0vix1iy3hkvz2fvqx8wdb8710n6"; - url = "mirror://steamrt/pool/main/f/fontconfig/libfontconfig1_2.8.0-3ubuntu9.1+srt4_i386.deb"; + name = "libfontconfig1_2.8.0-3ubuntu9.2+srt2_i386"; + sha256 = "1ls25q28jk9znmi0fhm30cqilx9bmm463zfq1jmj5apw96wk64n4"; + url = "mirror://steamrt/pool/main/f/fontconfig/libfontconfig1_2.8.0-3ubuntu9.2+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libfontconfig1.deb"; }; } rec { - name = "libfreetype6_2.4.8-1ubuntu2.3+srt1_i386"; - sha256 = "0661g4ghhynz49kkbr5kds1ms8prqmpm5rz0qv3c7cf62a2lb3x1"; - url = "mirror://steamrt/pool/main/f/freetype/libfreetype6_2.4.8-1ubuntu2.3+srt1_i386.deb"; + name = "libfreetype6_2.4.8-1ubuntu2.6+srt1_i386"; + sha256 = "1zahvr5h833mppcpg648jv28dywx9jiqdv58wlv1vpsk6d9599bh"; + url = "mirror://steamrt/pool/main/f/freetype/libfreetype6_2.4.8-1ubuntu2.6+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libfreetype6.deb"; }; } rec { - name = "libgcc1_4.8.1-2ubuntu1~12.04+steamrt2+srt1_i386"; - sha256 = "19qracxc45irfmsbcn668zwdxx37avp1igj1z4c6xq8bmp6w685d"; - url = "mirror://steamrt/pool/main/g/gcc-4.8/libgcc1_4.8.1-2ubuntu1~12.04+steamrt2+srt1_i386.deb"; + name = "libgcc1_5.4.0-7.really.6+steamrt1.1+srt1_i386"; + sha256 = "0bsm95m17f9lxrknl11jmaz9mqrbkd40p29z44497fw8miw736r2"; + url = "mirror://steamrt/pool/main/g/gcc-5/libgcc1_5.4.0-7.really.6+steamrt1.1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libgcc1.deb"; }; } rec { - name = "libgconf-2-4_3.2.5-0ubuntu2+srt4_i386"; - sha256 = "1srwysvh165hwiqxyl0aac3j39zzg2v4g3alix51cbvc4s6yzhy3"; - url = "mirror://steamrt/pool/main/g/gconf/libgconf-2-4_3.2.5-0ubuntu2+srt4_i386.deb"; + name = "libgconf-2-4_3.2.5-0ubuntu2+srt5_i386"; + sha256 = "07b1w4ww3xb5r13px85f8rv4nsc08rz8w3741zdk0vacq8scw4pb"; + url = "mirror://steamrt/pool/main/g/gconf/libgconf-2-4_3.2.5-0ubuntu2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libgconf-2-4.deb"; }; } rec { - name = "libgcrypt11_1.5.0-3ubuntu0.5+srt1_i386"; - sha256 = "1cg2kps7cfmildp9hlijxsj7bc2j71xal6bm57ldz2vjcv6k06hl"; - url = "mirror://steamrt/pool/main/libg/libgcrypt11/libgcrypt11_1.5.0-3ubuntu0.5+srt1_i386.deb"; + name = "libgcrypt11_1.5.0-3ubuntu0.6+srt2_i386"; + sha256 = "1wbaml6cjdijcaq6c9m0lcdlh350fk9a2prh6z4k7fjhsms60ppc"; + url = "mirror://steamrt/pool/main/libg/libgcrypt11/libgcrypt11_1.5.0-3ubuntu0.6+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libgcrypt11.deb"; }; } rec { - name = "libgdk-pixbuf2.0-0_2.26.1-1+steamrt3+srt4_i386"; - sha256 = "1n5pyqw2v87xw32lj73aywhfgcmnzi2wvxxw2gqv52d56vzj254s"; - url = "mirror://steamrt/pool/main/g/gdk-pixbuf/libgdk-pixbuf2.0-0_2.26.1-1+steamrt3+srt4_i386.deb"; + name = "libgdk-pixbuf2.0-0_2.26.1-1+steamrt3+srt5_i386"; + sha256 = "0fis055pnc01rb5v9vdqc17w4ijdb6sksf2qjysc4q2j33gvh6d5"; + url = "mirror://steamrt/pool/main/g/gdk-pixbuf/libgdk-pixbuf2.0-0_2.26.1-1+steamrt3+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libgdk-pixbuf2.0-0.deb"; }; } rec { - name = "libglew1.10_1.10.0-3+srt4_i386"; - sha256 = "1aswani1ymq52jyr4yhw4vi42gzw6xqk5ygh1d7zycakgrfs179b"; - url = "mirror://steamrt/pool/main/g/glew/libglew1.10_1.10.0-3+srt4_i386.deb"; + name = "libglew1.10_1.10.0-3+srt6_i386"; + sha256 = "17ki8vb4nbg140fg7vdfyb092lcr3hpsjx0z1gz13bvmzxcff3lf"; + url = "mirror://steamrt/pool/main/g/glew/libglew1.10_1.10.0-3+srt6_i386.deb"; source = fetchurl { inherit url sha256; name = "libglew1.10.deb"; }; } rec { - name = "libglew1.6_1.6.0-4+srt4_i386"; - sha256 = "0yxnfi8arnp3cphxdviyqslw7nxnd1mx11v9i5i2xnl907iyaxpq"; - url = "mirror://steamrt/pool/main/g/glew/libglew1.6_1.6.0-4+srt4_i386.deb"; - source = fetchurl { - inherit url sha256; - name = "libglew1.6.deb"; - }; - } - rec { - name = "libglib2.0-0_2.32.3-0ubuntu1+steamrt2+srt4_i386"; - sha256 = "1lmxm2gfz0mkjafpw8f98y73f0lj5m5nfdarqlpbb8dqbmpabwvk"; - url = "mirror://steamrt/pool/main/g/glib2.0/libglib2.0-0_2.32.3-0ubuntu1+steamrt2+srt4_i386.deb"; + name = "libglib2.0-0_2.32.3-0ubuntu1+steamrt3+srt2_i386"; + sha256 = "0l0vjcff86mw1mv5kizg3pcjr8rk9bn2gjf0d22jgljisq47f607"; + url = "mirror://steamrt/pool/main/g/glib2.0/libglib2.0-0_2.32.3-0ubuntu1+steamrt3+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libglib2.0-0.deb"; }; } rec { - name = "libglu1-mesa_8.0.4-0ubuntu0.7+srt4_i386"; - sha256 = "11sdfs3zphb8ks2cpb646z4vza6s4zpbfgaq99drn5z9b8d109zi"; - url = "mirror://steamrt/pool/main/m/mesa/libglu1-mesa_8.0.4-0ubuntu0.7+srt4_i386.deb"; + name = "libglu1-mesa_8.0.4-0ubuntu0.7+srt5_i386"; + sha256 = "1bc2hb2cb05j4iw9lrskrqkdh8iy7wv3d1sknqn1ya847w98h9hr"; + url = "mirror://steamrt/pool/main/m/mesa/libglu1-mesa_8.0.4-0ubuntu0.7+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libglu1-mesa.deb"; }; } rec { - name = "libgmp10_5.0.2+dfsg-2ubuntu1+srt4_i386"; - sha256 = "1f6ss23vybyqkifjr9nam0y6va34m2vdpaxbwjmwi2z4wwj7pn9k"; - url = "mirror://steamrt/pool/main/g/gmp/libgmp10_5.0.2+dfsg-2ubuntu1+srt4_i386.deb"; + name = "libgmp10_5.0.2+dfsg-2ubuntu1+srt5_i386"; + sha256 = "0y6qrw7n41szpi8p2fpilx20wmqk3arw0m7kr35isy0y3icpryka"; + url = "mirror://steamrt/pool/main/g/gmp/libgmp10_5.0.2+dfsg-2ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libgmp10.deb"; }; } rec { - name = "libgnutls26_2.12.14-5ubuntu3.11+srt1_i386"; - sha256 = "0580r5n6z9s147q4bkkm75a2pwb1ganz9msbp440rwwh6xahrh56"; - url = "mirror://steamrt/pool/main/g/gnutls26/libgnutls26_2.12.14-5ubuntu3.11+srt1_i386.deb"; + name = "libgnutls26_2.12.14-5ubuntu3.14+srt1_i386"; + sha256 = "1f5dv4bk2g9ldqfjm7a2a6mx2ignzgxy42ghl9yny6x9xz39g56h"; + url = "mirror://steamrt/pool/main/g/gnutls26/libgnutls26_2.12.14-5ubuntu3.14+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libgnutls26.deb"; }; } rec { - name = "libgomp1_4.8.1-2ubuntu1~12.04+steamrt2+srt1_i386"; - sha256 = "04mywbz2lmxap8nq1rvj7aggkrvrgfz4869q41f0d6dnsmnbsj5k"; - url = "mirror://steamrt/pool/main/g/gcc-4.8/libgomp1_4.8.1-2ubuntu1~12.04+steamrt2+srt1_i386.deb"; + name = "libgomp1_5.4.0-7.really.6+steamrt1.1+srt1_i386"; + sha256 = "0p6gj53jdk3d4nmhkiiqvh8sk3pm2g99iqfmlc7br1gxvmpjjj3s"; + url = "mirror://steamrt/pool/main/g/gcc-5/libgomp1_5.4.0-7.really.6+steamrt1.1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libgomp1.deb"; }; } rec { - name = "libgpg-error0_1.10-2ubuntu1+srt4_i386"; - sha256 = "0hjfgcmrjr02xk788chyafg7j8viwmp2vrqyfjdjf79kvpy0354s"; - url = "mirror://steamrt/pool/main/libg/libgpg-error/libgpg-error0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libgpg-error0_1.10-2ubuntu1+srt5_i386"; + sha256 = "19wh8hdp5lcf68w2hwmj8z55j2bcp61ydf37cs796rvzsxbsbamr"; + url = "mirror://steamrt/pool/main/libg/libgpg-error/libgpg-error0_1.10-2ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libgpg-error0.deb"; }; } rec { - name = "libgssapi-krb5-2_1.10+dfsg~beta1-2ubuntu0.7+srt1_i386"; - sha256 = "06sqdxf38qm6cd76gdir6m9rvbg4xv70jhh36zshxxhi50lhpjcx"; - url = "mirror://steamrt/pool/main/k/krb5/libgssapi-krb5-2_1.10+dfsg~beta1-2ubuntu0.7+srt1_i386.deb"; + name = "libgssapi-krb5-2_1.10+dfsg~beta1-2ubuntu0.7+srt2_i386"; + sha256 = "1zkvqbm3i297b6pj0japgs3jcvps8my6icsh2n1ka6nvflvdr87h"; + url = "mirror://steamrt/pool/main/k/krb5/libgssapi-krb5-2_1.10+dfsg~beta1-2ubuntu0.7+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libgssapi-krb5-2.deb"; }; } rec { - name = "libgssapi3-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386"; - sha256 = "015jb2j56ia3zvfmjlx72yjlvfv8z8bg0ff4z5nh1d25cambqcbs"; - url = "mirror://steamrt/pool/main/h/heimdal/libgssapi3-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386.deb"; + name = "libgssapi3-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386"; + sha256 = "0q2r4fmpql34hpd061289ijl40y66wp8rlh78b2ysg8dkvycni0k"; + url = "mirror://steamrt/pool/main/h/heimdal/libgssapi3-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libgssapi3-heimdal.deb"; }; } rec { - name = "libgstreamer-plugins-base0.10-0_0.10.36-1ubuntu0.1+srt4_i386"; - sha256 = "14z4v2j7lc5xnzbfpf8b3b5qg0d2yg917v4ighxy2nydf2zy0mrs"; - url = "mirror://steamrt/pool/main/g/gst-plugins-base0.10/libgstreamer-plugins-base0.10-0_0.10.36-1ubuntu0.1+srt4_i386.deb"; + name = "libgstreamer-plugins-base0.10-0_0.10.36-1ubuntu0.2+srt1_i386"; + sha256 = "0nq6hvv00b3s5fmay2nm4s869y6lws8v2w9lrqlpgs08z6fh6mjp"; + url = "mirror://steamrt/pool/main/g/gst-plugins-base0.10/libgstreamer-plugins-base0.10-0_0.10.36-1ubuntu0.2+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libgstreamer-plugins-base0.10-0.deb"; }; } rec { - name = "libgstreamer0.10-0_0.10.36-1ubuntu1+srt4_i386"; - sha256 = "06lp4ajhnczb5salf6njgi1q24zv3yrkqhgvbyq45dvsax76kafj"; - url = "mirror://steamrt/pool/main/g/gstreamer0.10/libgstreamer0.10-0_0.10.36-1ubuntu1+srt4_i386.deb"; + name = "libgstreamer0.10-0_0.10.36-1ubuntu1+srt5_i386"; + sha256 = "0arypn4k1wvaiqqxc271r5w7bkdk0f4mh88l4np3ngfyzn2w6z61"; + url = "mirror://steamrt/pool/main/g/gstreamer0.10/libgstreamer0.10-0_0.10.36-1ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libgstreamer0.10-0.deb"; }; } rec { - name = "libgtk2.0-0_2.24.10-0ubuntu6+steamrt1+srt4_i386"; - sha256 = "0qhvr5pyjj0vh2c1658gmx9r7h194py8qbcx69qfca2czp9hhacs"; - url = "mirror://steamrt/pool/main/g/gtk+2.0/libgtk2.0-0_2.24.10-0ubuntu6+steamrt1+srt4_i386.deb"; + name = "libgtk2.0-0_2.24.10-0ubuntu6+steamrt1+srt5_i386"; + sha256 = "0swmpdf7872z0nb3rsfixspg11nvf0k7sm4xcdgvcliaqjhyv570"; + url = "mirror://steamrt/pool/main/g/gtk+2.0/libgtk2.0-0_2.24.10-0ubuntu6+steamrt1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libgtk2.0-0.deb"; }; } rec { - name = "libgtk2.0-common_2.24.10-0ubuntu6+steamrt1+srt4_all"; - sha256 = "0xgh9nrvj1hf3wj9pqm9x3ykw95v9bsh5k2vgr3cr9135rrj0dp5"; - url = "mirror://steamrt/pool/main/g/gtk+2.0/libgtk2.0-common_2.24.10-0ubuntu6+steamrt1+srt4_all.deb"; + name = "libgtk2.0-common_2.24.10-0ubuntu6+steamrt1+srt5_all"; + sha256 = "0rw8iy16ij86abh444jk1xw78b5z81qjxm1292jin3sfhck4bd4x"; + url = "mirror://steamrt/pool/main/g/gtk+2.0/libgtk2.0-common_2.24.10-0ubuntu6+steamrt1+srt5_all.deb"; source = fetchurl { inherit url sha256; name = "libgtk2.0-common.deb"; }; } rec { - name = "libgudev-1.0-0_175-0ubuntu9.2+srt4_i386"; - sha256 = "0z8ncxaqxna0ihlp19i7b59k9vbkynak49kim821rwxsxvjqsfcd"; - url = "mirror://steamrt/pool/main/u/udev/libgudev-1.0-0_175-0ubuntu9.2+srt4_i386.deb"; + name = "libgudev-1.0-0_175-0ubuntu9.10+srt1_i386"; + sha256 = "09gjla6gsx8whbvhzwvgjnm19md7bgpvb76kjfmxzm54hakcjxla"; + url = "mirror://steamrt/pool/main/u/udev/libgudev-1.0-0_175-0ubuntu9.10+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libgudev-1.0-0.deb"; }; } rec { - name = "libhcrypto4-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386"; - sha256 = "195yrcwrw8bnai5kkvhdq7nnjv643af5dyc97qcnfnvnvs20az42"; - url = "mirror://steamrt/pool/main/h/heimdal/libhcrypto4-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386.deb"; + name = "libhcrypto4-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386"; + sha256 = "18v3rqaclhdmbh25p48sa6qidi3birnymdfzg2c8z5bpg1giis83"; + url = "mirror://steamrt/pool/main/h/heimdal/libhcrypto4-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libhcrypto4-heimdal.deb"; }; } rec { - name = "libheimbase1-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386"; - sha256 = "0g2dml08mw4yy9llnn2149x1niy97mqbz56rphw3g3zv5nivnbp3"; - url = "mirror://steamrt/pool/main/h/heimdal/libheimbase1-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386.deb"; + name = "libheimbase1-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386"; + sha256 = "1546i5h5137ysvcgvyi6hplfx54wqya8sr233vgn838xd2bz024r"; + url = "mirror://steamrt/pool/main/h/heimdal/libheimbase1-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libheimbase1-heimdal.deb"; }; } rec { - name = "libheimntlm0-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386"; - sha256 = "0dbs4gxbfdhn2sbzfny75fzxiab9k8l1vd3vm7i4zfkbkx3lbr2x"; - url = "mirror://steamrt/pool/main/h/heimdal/libheimntlm0-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386.deb"; + name = "libheimntlm0-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386"; + sha256 = "1yk0ap8wsi5k2wz5i9vcdw332kbhnlbf5hb8la9pckfrxy6bca82"; + url = "mirror://steamrt/pool/main/h/heimdal/libheimntlm0-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libheimntlm0-heimdal.deb"; }; } rec { - name = "libhx509-5-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386"; - sha256 = "01z9qr5r7n7vfkkb95apmkcc35va43qxsf0nzxff8x1ll82l3n7a"; - url = "mirror://steamrt/pool/main/h/heimdal/libhx509-5-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386.deb"; + name = "libhx509-5-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386"; + sha256 = "0y6awbyl4w56qa8vkn9dzsnb3162x4p5nr1cf7ir119nl05987cp"; + url = "mirror://steamrt/pool/main/h/heimdal/libhx509-5-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libhx509-5-heimdal.deb"; }; } rec { - name = "libice6_1.0.7-2build1+srt4_i386"; - sha256 = "1gmykmbbxk9590snli45dcvj00v77xn2za8v8193v020qa8hvmik"; - url = "mirror://steamrt/pool/main/libi/libice/libice6_1.0.7-2build1+srt4_i386.deb"; + name = "libice6_1.0.7-2build1+srt5_i386"; + sha256 = "02nygw4q330jgrfgbp46fjpa97bmgzk7sg9ikh97k4c743lshija"; + url = "mirror://steamrt/pool/main/libi/libice/libice6_1.0.7-2build1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libice6.deb"; }; } rec { - name = "libidn11_1.23-2+steamrt1+srt4_i386"; - sha256 = "1xmv6kqn3zpnls7nyqd2bjqzc03y4w2gp0xmq6l8wwi659dkr4vz"; - url = "mirror://steamrt/pool/main/libi/libidn/libidn11_1.23-2+steamrt1+srt4_i386.deb"; + name = "libidn11_1.23-2+steamrt1+srt5_i386"; + sha256 = "1wv5rfk5a9y6w5wylvbxj8kbmav61y5w3j413kvf373xnhp79gaf"; + url = "mirror://steamrt/pool/main/libi/libidn/libidn11_1.23-2+steamrt1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libidn11.deb"; }; } rec { - name = "libindicator7_0.5.0-0ubuntu1+srt4_i386"; - sha256 = "0j1v3ljb01wyy5v8a5ad8ar9wmx2hf6qd50k7cl95si60zs79bk6"; - url = "mirror://steamrt/pool/main/libi/libindicator/libindicator7_0.5.0-0ubuntu1+srt4_i386.deb"; + name = "libindicator7_0.5.0-0ubuntu1+steamrt1+srt1_i386"; + sha256 = "1qiyw54y8yra871vzvdlj2cqhf1yvg68h9zckyyv87s753x98kkq"; + url = "mirror://steamrt/pool/main/libi/libindicator/libindicator7_0.5.0-0ubuntu1+steamrt1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libindicator7.deb"; }; } rec { - name = "libjack-jackd2-0_1.9.8~dfsg.1-1ubuntu2+srt3_i386"; - sha256 = "06gz25p9qm0lbxaqzag2y2lhc0wx9cnkxz7zdm2yfdcx1y4vbymx"; - url = "mirror://steamrt/pool/main/j/jackd2/libjack-jackd2-0_1.9.8~dfsg.1-1ubuntu2+srt3_i386.deb"; + name = "libjack-jackd2-0_1.9.8~dfsg.1-1ubuntu2+srt4_i386"; + sha256 = "02c4fj82svlkh9whsasclshjlvgbcabsz64ac47hvs2ccaap0gis"; + url = "mirror://steamrt/pool/main/j/jackd2/libjack-jackd2-0_1.9.8~dfsg.1-1ubuntu2+srt4_i386.deb"; source = fetchurl { inherit url sha256; name = "libjack-jackd2-0.deb"; }; } rec { - name = "libjpeg-turbo8_1.1.90+svn733-0ubuntu4.3+srt4_i386"; - sha256 = "1m1986mn0ad5basd8hlby4d6jxpps4v0ib2g2pwqxdlil39gmar5"; - url = "mirror://steamrt/pool/main/libj/libjpeg-turbo/libjpeg-turbo8_1.1.90+svn733-0ubuntu4.3+srt4_i386.deb"; + name = "libjpeg-turbo8_1.1.90+svn733-0ubuntu4.3+srt5_i386"; + sha256 = "0bcp6bxrgdbcgwrg2qgrax111w6xfwyf3rwrpf8j9mwd91hzm0c8"; + url = "mirror://steamrt/pool/main/libj/libjpeg-turbo/libjpeg-turbo8_1.1.90+svn733-0ubuntu4.3+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libjpeg-turbo8.deb"; }; } rec { - name = "libjpeg62_6b1-2ubuntu1.1+srt4_i386"; - sha256 = "1fjbscq7qp895z5g5aw5l98rfj0qpr66rl5r4m0f1ilrjn83i96y"; - url = "mirror://steamrt/pool/main/libj/libjpeg6b/libjpeg62_6b1-2ubuntu1.1+srt4_i386.deb"; + name = "libjpeg62_6b1-2ubuntu1.1+srt5_i386"; + sha256 = "1l3hm9p30w2kwbjyri452h9v0nprznsl9jh32l9hg4php8kjfidw"; + url = "mirror://steamrt/pool/main/libj/libjpeg6b/libjpeg62_6b1-2ubuntu1.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libjpeg62.deb"; }; } rec { - name = "libjson0_0.9-1ubuntu1.1+srt2_i386"; - sha256 = "0nlhsclyxqa1s05hnzid6j8h0986v9viv6dysg22bc16gfdg9i1j"; - url = "mirror://steamrt/pool/main/j/json-c/libjson0_0.9-1ubuntu1.1+srt2_i386.deb"; + name = "libjson0_0.9-1ubuntu1.1+srt3_i386"; + sha256 = "0jnbwf7j7fmrylav1dck17kajxdyc67gfmpn09wrrqy0zgdbg3zi"; + url = "mirror://steamrt/pool/main/j/json-c/libjson0_0.9-1ubuntu1.1+srt3_i386.deb"; source = fetchurl { inherit url sha256; name = "libjson0.deb"; }; } rec { - name = "libk5crypto3_1.10+dfsg~beta1-2ubuntu0.7+srt1_i386"; - sha256 = "0h2iv7p0w5ydd9nqfwmm4avjhcnki7nl000gpsdnrpfjrbv4rnlb"; - url = "mirror://steamrt/pool/main/k/krb5/libk5crypto3_1.10+dfsg~beta1-2ubuntu0.7+srt1_i386.deb"; + name = "libk5crypto3_1.10+dfsg~beta1-2ubuntu0.7+srt2_i386"; + sha256 = "0czc7vf1q84k252wsx9v9na2jn8vqym62dnb100992cpzj2956c1"; + url = "mirror://steamrt/pool/main/k/krb5/libk5crypto3_1.10+dfsg~beta1-2ubuntu0.7+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libk5crypto3.deb"; }; } rec { - name = "libkeyutils1_1.5.2-2+srt4_i386"; - sha256 = "1v9b3dg1s3ykj5abi4y2392m12dw2n7zrays6sv1n2dw46f2lj4k"; - url = "mirror://steamrt/pool/main/k/keyutils/libkeyutils1_1.5.2-2+srt4_i386.deb"; + name = "libkeyutils1_1.5.2-2+srt5_i386"; + sha256 = "0vmd87b8kk579fi99di79p94nkl0584bsdhgw2gw03czbainq9rx"; + url = "mirror://steamrt/pool/main/k/keyutils/libkeyutils1_1.5.2-2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libkeyutils1.deb"; }; } rec { - name = "libkrb5-26-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386"; - sha256 = "0h4mnxfsf8j12g33lca2nlrcma9d8gdchxckzr916yp4snzjk0bb"; - url = "mirror://steamrt/pool/main/h/heimdal/libkrb5-26-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386.deb"; + name = "libkrb5-26-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386"; + sha256 = "1hjdfsvqzvssxiamjq9dddlzjjz54grzva2a7rsipbmmvnw254yd"; + url = "mirror://steamrt/pool/main/h/heimdal/libkrb5-26-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libkrb5-26-heimdal.deb"; }; } rec { - name = "libkrb5-3_1.10+dfsg~beta1-2ubuntu0.7+srt1_i386"; - sha256 = "1ay1g283y3y6czm56r7wiibarwv267bg707ncaq4m7a9bxa0fmy2"; - url = "mirror://steamrt/pool/main/k/krb5/libkrb5-3_1.10+dfsg~beta1-2ubuntu0.7+srt1_i386.deb"; + name = "libkrb5-3_1.10+dfsg~beta1-2ubuntu0.7+srt2_i386"; + sha256 = "1cr6z0jv6mchs82p6iyskdq6ppbfpyixanxwdbjdg76cpb5as3ii"; + url = "mirror://steamrt/pool/main/k/krb5/libkrb5-3_1.10+dfsg~beta1-2ubuntu0.7+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libkrb5-3.deb"; }; } rec { - name = "libkrb5support0_1.10+dfsg~beta1-2ubuntu0.7+srt1_i386"; - sha256 = "031qjg6aajyrdj7ny9dl2v6p9syyngqfrdy277351814zcclhm1l"; - url = "mirror://steamrt/pool/main/k/krb5/libkrb5support0_1.10+dfsg~beta1-2ubuntu0.7+srt1_i386.deb"; + name = "libkrb5support0_1.10+dfsg~beta1-2ubuntu0.7+srt2_i386"; + sha256 = "11v68jp8f24abx7i6b69jimlmv0lvpb5hnlxnj3f281zsz2smpyw"; + url = "mirror://steamrt/pool/main/k/krb5/libkrb5support0_1.10+dfsg~beta1-2ubuntu0.7+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libkrb5support0.deb"; }; } rec { - name = "liblcms2-2_2.2+git20110628-2ubuntu3.1+srt4_i386"; - sha256 = "03ix9r3mxvgq5i5qv7zhjmmg8bki8gvgg4n8r79az5zbp4nxmi4f"; - url = "mirror://steamrt/pool/main/l/lcms2/liblcms2-2_2.2+git20110628-2ubuntu3.1+srt4_i386.deb"; + name = "liblcms2-2_2.2+git20110628-2ubuntu3.1+srt5_i386"; + sha256 = "1bpb8gfach74nibzzd2mk7mkdhlw1j27yrgckpl9pgzq8jd0ch70"; + url = "mirror://steamrt/pool/main/l/lcms2/liblcms2-2_2.2+git20110628-2ubuntu3.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "liblcms2-2.deb"; }; } rec { - name = "libldap-2.4-2_2.4.28-1.1ubuntu4.2+steamrt1+srt4_i386"; - sha256 = "0aycpf6xkr4fxr72np52jg6y384sy5b2r68kmmnzixqifykgc7jx"; - url = "mirror://steamrt/pool/main/o/openldap/libldap-2.4-2_2.4.28-1.1ubuntu4.2+steamrt1+srt4_i386.deb"; + name = "libldap-2.4-2_2.4.28-1.1ubuntu4.2+steamrt1+srt5_i386"; + sha256 = "1147dl2h2k2xhl6xlpnamg95rkmp4nq2k01fcrv09x442hmx34xf"; + url = "mirror://steamrt/pool/main/o/openldap/libldap-2.4-2_2.4.28-1.1ubuntu4.2+steamrt1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libldap-2.4-2.deb"; }; } rec { - name = "libltdl7_2.4.2-1ubuntu1+srt4_i386"; - sha256 = "1kjphpfqjr5zsa1z1zq4dibxwhm5861vardc3xic4izqf05vd6nj"; - url = "mirror://steamrt/pool/main/libt/libtool/libltdl7_2.4.2-1ubuntu1+srt4_i386.deb"; + name = "libltdl7_2.4.2-1ubuntu1+srt5_i386"; + sha256 = "1jv01xk4bf0sbq8jawa0zm1q0imc7nmzdwcmkhgscld02rzwwffs"; + url = "mirror://steamrt/pool/main/libt/libtool/libltdl7_2.4.2-1ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libltdl7.deb"; }; } rec { - name = "libmikmod2_3.1.12-2+srt4_i386"; - sha256 = "1rm18888n955wgh75srgrfhm0zgxz0n5sr030zc4lpp3bx4x2pfd"; - url = "mirror://steamrt/pool/main/libm/libmikmod/libmikmod2_3.1.12-2+srt4_i386.deb"; + name = "libmikmod2_3.1.12-2+srt5_i386"; + sha256 = "12dmbmkv3gmi1cz0bs3fsbhgnhzvf8cjp0b6zj2a2dgplw1h6qdr"; + url = "mirror://steamrt/pool/main/libm/libmikmod/libmikmod2_3.1.12-2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libmikmod2.deb"; }; } rec { - name = "libncurses5_5.9-4+srt4_i386"; - sha256 = "1lc9s9rapyq6ld0xzlagqi5ah07gh59lixg0sh4xxm4sz75z6h21"; - url = "mirror://steamrt/pool/main/n/ncurses/libncurses5_5.9-4+srt4_i386.deb"; + name = "libncurses5_5.9-4+srt5_i386"; + sha256 = "1jsi7qvwy4h1z1mf9qlhp5pizbn84qgnpgi2y1qjlgym8428k0ga"; + url = "mirror://steamrt/pool/main/n/ncurses/libncurses5_5.9-4+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libncurses5.deb"; }; } rec { - name = "libncursesw5_5.9-4+srt4_i386"; - sha256 = "1j5r17ph0z43npv4nh5xgz0fdw9magas5ryr6qpi2pcqf5x9pp9r"; - url = "mirror://steamrt/pool/main/n/ncurses/libncursesw5_5.9-4+srt4_i386.deb"; + name = "libncursesw5_5.9-4+srt5_i386"; + sha256 = "17hfrf97qcrw1n7p4nwwwiw3jpqpjphqwnq73pb7p8bsp53qa4h4"; + url = "mirror://steamrt/pool/main/n/ncurses/libncursesw5_5.9-4+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libncursesw5.deb"; }; } rec { - name = "libnm-glib4_0.9.4.0-0ubuntu4.2+steamrt1+srt4_i386"; - sha256 = "1jr5nysd947lvk39ki1lx1y8csyaw10vlm9db7djrn20b1a6dsns"; - url = "mirror://steamrt/pool/main/n/network-manager/libnm-glib4_0.9.4.0-0ubuntu4.2+steamrt1+srt4_i386.deb"; + name = "libnm-glib4_0.9.4.0-0ubuntu4.2+steamrt2+srt1_i386"; + sha256 = "0vsd00x0wvqw84zqlqrbmdxfmzshrvwbr2az3ynkaz8azkxj1d6d"; + url = "mirror://steamrt/pool/main/n/network-manager/libnm-glib4_0.9.4.0-0ubuntu4.2+steamrt2+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libnm-glib4.deb"; }; } rec { - name = "libnm-util2_0.9.4.0-0ubuntu4.2+steamrt1+srt4_i386"; - sha256 = "01gf2wf722mc28hyfh3g45p2qq0v04nrhkhz96xd8mwa7jdx0cb9"; - url = "mirror://steamrt/pool/main/n/network-manager/libnm-util2_0.9.4.0-0ubuntu4.2+steamrt1+srt4_i386.deb"; + name = "libnm-util2_0.9.4.0-0ubuntu4.2+steamrt2+srt1_i386"; + sha256 = "1vaqqgxzvixvh8cvdspyr7azfn8dmknvsypz628h2xvbldf0p156"; + url = "mirror://steamrt/pool/main/n/network-manager/libnm-util2_0.9.4.0-0ubuntu4.2+steamrt2+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libnm-util2.deb"; }; } rec { - name = "libnotify4_0.7.5-1+srt4_i386"; - sha256 = "00nfvgckkdfal6qfbj4hcp5jc0rs57ksl48ciy87v46inxgp67z5"; - url = "mirror://steamrt/pool/main/libn/libnotify/libnotify4_0.7.5-1+srt4_i386.deb"; + name = "libnotify4_0.7.5-1+srt5_i386"; + sha256 = "0420awfss4r2j8ncrvnapdj9gbh68z7qlp1vbq9wiaqraqy7zccw"; + url = "mirror://steamrt/pool/main/libn/libnotify/libnotify4_0.7.5-1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libnotify4.deb"; }; } rec { - name = "libnspr4_4.10.10-0ubuntu0.12.04.1+srt1_i386"; - sha256 = "00di7dw9a124ahc04m1rs8w3mdx1kpjhf696zvgxprn8qrwwp84n"; - url = "mirror://steamrt/pool/main/n/nspr/libnspr4_4.10.10-0ubuntu0.12.04.1+srt1_i386.deb"; + name = "libnspr4_4.12-0ubuntu0.12.04.1+srt2_i386"; + sha256 = "1kfs3afaqrfhajbp6dlwzcbzvl8xsg2c04c6b5l1bby1l4ynmqv2"; + url = "mirror://steamrt/pool/main/n/nspr/libnspr4_4.12-0ubuntu0.12.04.1+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libnspr4.deb"; }; } rec { - name = "libnss3_3.19.2.1-0ubuntu0.12.04.2+srt1_i386"; - sha256 = "1n46ln69sny735q75sn8g7sp23ahdav277bp0d0bl62k11xa3fnm"; - url = "mirror://steamrt/pool/main/n/nss/libnss3_3.19.2.1-0ubuntu0.12.04.2+srt1_i386.deb"; + name = "libnss3_3.26.2-0ubuntu0.12.04.1+srt1_i386"; + sha256 = "00m55f14ih9xyri197hnslw2mnzgl0dxwqvwiba0hnhfl3qvqi99"; + url = "mirror://steamrt/pool/main/n/nss/libnss3_3.26.2-0ubuntu0.12.04.1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libnss3.deb"; }; } rec { - name = "libogg0_1.2.2~dfsg-1ubuntu1+srt4_i386"; - sha256 = "0bnsrk44pwzwjs7yw44kzbr5b10kq3jsvrskzxxr2sv12ljhxmrj"; - url = "mirror://steamrt/pool/main/libo/libogg/libogg0_1.2.2~dfsg-1ubuntu1+srt4_i386.deb"; + name = "libogg0_1.2.2~dfsg-1ubuntu1+srt5_i386"; + sha256 = "0b47v6s9x8hvhkgvgmy01rxd81i1c8icb0lpf3mldp5ss1q8fwgj"; + url = "mirror://steamrt/pool/main/libo/libogg/libogg0_1.2.2~dfsg-1ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libogg0.deb"; }; } rec { - name = "libopenal1_1.13-4ubuntu3+steamrt1+srt4_i386"; - sha256 = "18g56z1s8yyxhklqmpy6l22zcbzkvws26v6b1xgg4w3k33hbcjng"; - url = "mirror://steamrt/pool/main/o/openal-soft/libopenal1_1.13-4ubuntu3+steamrt1+srt4_i386.deb"; + name = "libopenal1_1.16.0-3+srt1_i386"; + sha256 = "1barqvh4klpdabc1v9kb2q4l8pnmdx97h00hln32zca5z4y5ff9i"; + url = "mirror://steamrt/pool/main/o/openal-soft/libopenal1_1.16.0-3+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libopenal1.deb"; }; } rec { - name = "liborc-0.4-0_0.4.16-1ubuntu2+srt4_i386"; - sha256 = "0yfqakir28jnn873xxqdickf54mnlpp25946fi1malvxadjcqjll"; - url = "mirror://steamrt/pool/main/o/orc/liborc-0.4-0_0.4.16-1ubuntu2+srt4_i386.deb"; + name = "liborc-0.4-0_0.4.16-1ubuntu2+srt5_i386"; + sha256 = "0n9fkxs3qkd4mwhm4cwlnljww1yalwqjcgia420ls3h7i4p7ss4v"; + url = "mirror://steamrt/pool/main/o/orc/liborc-0.4-0_0.4.16-1ubuntu2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "liborc-0.4-0.deb"; }; } rec { - name = "libp11-kit0_0.12-2ubuntu1+srt4_i386"; - sha256 = "1f97dfd0z1fzk1l4zphdabxq7q02pdql03ifc265chzq4zpaghbh"; - url = "mirror://steamrt/pool/main/p/p11-kit/libp11-kit0_0.12-2ubuntu1+srt4_i386.deb"; + name = "libp11-kit0_0.12-2ubuntu1+srt5_i386"; + sha256 = "1nfcccnsn7x44wqwgkz0h9b3hzy3a0cknc51syniabsqds5w2i8p"; + url = "mirror://steamrt/pool/main/p/p11-kit/libp11-kit0_0.12-2ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libp11-kit0.deb"; }; } rec { - name = "libpango1.0-0_1.30.0-0ubuntu3.1+steamrt1+srt4_i386"; - sha256 = "0xda2k934wpfq01lrc9yw6fy6bispnfyyp5k0iszzh8awfjghrjj"; - url = "mirror://steamrt/pool/main/p/pango1.0/libpango1.0-0_1.30.0-0ubuntu3.1+steamrt1+srt4_i386.deb"; + name = "libpango1.0-0_1.30.0-0ubuntu3.1+steamrt1+srt5_i386"; + sha256 = "0w6m9ycpmlir2wvb7jj0w1p6sh84bjng9i0549bn0afq58f05biw"; + url = "mirror://steamrt/pool/main/p/pango1.0/libpango1.0-0_1.30.0-0ubuntu3.1+steamrt1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libpango1.0-0.deb"; }; } rec { - name = "libpci3_3.1.8-2ubuntu5+srt4_i386"; - sha256 = "1zi4g80r8cgy4zawdddfkklp6q98xm3qlad1a27rfw6zlg66a028"; - url = "mirror://steamrt/pool/main/p/pciutils/libpci3_3.1.8-2ubuntu5+srt4_i386.deb"; + name = "libpci3_3.1.8-2ubuntu6+srt1_i386"; + sha256 = "1jdakz038hxpkfh0g10acwlaaiqys7c546srdjhmhl9jxizw9ck8"; + url = "mirror://steamrt/pool/main/p/pciutils/libpci3_3.1.8-2ubuntu6+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libpci3.deb"; }; } rec { - name = "libpcre3_8.12-4+srt4_i386"; - sha256 = "1v1jj9vwsd6k0f6l9a72pbx3idlnjs32zxd1gci2fanma7fsp4vj"; - url = "mirror://steamrt/pool/main/p/pcre3/libpcre3_8.12-4+srt4_i386.deb"; + name = "libpcre3_8.12-4+steamrt1.1ubuntu0.2+srt1_i386"; + sha256 = "12ycdj8pwxlhhqbg89h6smgvnik2pvy6bqyx9szqmpdcjzddagp5"; + url = "mirror://steamrt/pool/main/p/pcre3/libpcre3_8.12-4+steamrt1.1ubuntu0.2+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libpcre3.deb"; }; } rec { - name = "libpcrecpp0_8.12-4+srt4_i386"; - sha256 = "01qklrzg9mprb45mn0bj9r5p5d3lmrz0mhiqwjxg07w533gycyr6"; - url = "mirror://steamrt/pool/main/p/pcre3/libpcrecpp0_8.12-4+srt4_i386.deb"; + name = "libpcrecpp0_8.12-4+steamrt1.1ubuntu0.2+srt1_i386"; + sha256 = "0ml6bh7banikn75hzy68s2yx6y6924if4zar10lra1akl63by80l"; + url = "mirror://steamrt/pool/main/p/pcre3/libpcrecpp0_8.12-4+steamrt1.1ubuntu0.2+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libpcrecpp0.deb"; }; } rec { - name = "libpixman-1-0_0.30.2-1ubuntu0.0.0.0.2+srt1_i386"; - sha256 = "004abdax9r66z0a359rik8dqc9bsx177m8z5ygjsh40yv7fjgc9g"; - url = "mirror://steamrt/pool/main/p/pixman/libpixman-1-0_0.30.2-1ubuntu0.0.0.0.2+srt1_i386.deb"; + name = "libpixman-1-0_0.30.2-1ubuntu0.0.0.0.3+srt2_i386"; + sha256 = "06ch7dsjmjx2c67f932930rawn1cil6vxfnc0xcx937iwd3sq8i7"; + url = "mirror://steamrt/pool/main/p/pixman/libpixman-1-0_0.30.2-1ubuntu0.0.0.0.3+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libpixman-1-0.deb"; }; } rec { - name = "libpng12-0_1.2.46-3ubuntu4.2+srt1_i386"; - sha256 = "0ahap0mzqdl51ia615j09yaawi36khv9bj9z5bd0wspfyjls0a74"; - url = "mirror://steamrt/pool/main/libp/libpng/libpng12-0_1.2.46-3ubuntu4.2+srt1_i386.deb"; + name = "libpng12-0_1.2.46-3ubuntu4.2+srt2_i386"; + sha256 = "0vv10bzxqxnfmp1p4wl9c19kravqa7pcpcc6xar5przgwfv75fd8"; + url = "mirror://steamrt/pool/main/libp/libpng/libpng12-0_1.2.46-3ubuntu4.2+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libpng12-0.deb"; }; } rec { - name = "libpulse0_1.1-0ubuntu15.2+steamrt1+srt4_i386"; - sha256 = "1gwsfmr80r59y7ic21shbflf505wl0izsm1mvld3yif80vfz4hdn"; - url = "mirror://steamrt/pool/main/p/pulseaudio/libpulse0_1.1-0ubuntu15.2+steamrt1+srt4_i386.deb"; + name = "libpulse0_1.1-0ubuntu15.2+steamrt1+srt5_i386"; + sha256 = "0frhw8cw2ima5j40grmdk0hjf6hg6b029wr3f2g2252wzbhzx6ac"; + url = "mirror://steamrt/pool/main/p/pulseaudio/libpulse0_1.1-0ubuntu15.2+steamrt1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libpulse0.deb"; }; } rec { - name = "libroken18-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386"; - sha256 = "0lfzgjyp4gxs6ns3v0xx82gpr784b7rwnhh37njq9zmhaq7mxpn6"; - url = "mirror://steamrt/pool/main/h/heimdal/libroken18-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386.deb"; + name = "libroken18-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386"; + sha256 = "1284xglgq9j0dqrgggs6455p0qidq5dxd7axgvi22zhzq3h5adfd"; + url = "mirror://steamrt/pool/main/h/heimdal/libroken18-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libroken18-heimdal.deb"; }; } rec { - name = "librtmp0_2.4~20110711.gitc28f1bab-1+srt4_i386"; - sha256 = "0x6dkzfc9bdcjr0sq6dl0vk0sjjm9pwp4hb2m8wjynykpinbzbxi"; - url = "mirror://steamrt/pool/main/r/rtmpdump/librtmp0_2.4~20110711.gitc28f1bab-1+srt4_i386.deb"; + name = "librtmp0_2.4~20110711.gitc28f1bab-1+srt5_i386"; + sha256 = "04wg1b9i77hv87ra7xbhqzcx6m9xdpx72b6d7pxnkrxxxc8sp35d"; + url = "mirror://steamrt/pool/main/r/rtmpdump/librtmp0_2.4~20110711.gitc28f1bab-1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "librtmp0.deb"; }; } rec { - name = "libsamplerate0_0.1.8-4+srt4_i386"; - sha256 = "10dm5k8c6f8q6vgk0ab52kvikbrgiflbmkflbix42rm5l44bz8hd"; - url = "mirror://steamrt/pool/main/libs/libsamplerate/libsamplerate0_0.1.8-4+srt4_i386.deb"; + name = "libsamplerate0_0.1.8-4+srt5_i386"; + sha256 = "070cz870znj9584a9y9npp7zzkkcb049ar2g6m3v1dzf8ijha38x"; + url = "mirror://steamrt/pool/main/libs/libsamplerate/libsamplerate0_0.1.8-4+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libsamplerate0.deb"; }; } rec { - name = "libsasl2-2_2.1.25.dfsg1-3ubuntu0.1+srt4_i386"; - sha256 = "19pkr848bjg2zg43z2l5npx97ydx4jgf7c5n33ckj6wbgxvzbn1s"; - url = "mirror://steamrt/pool/main/c/cyrus-sasl2/libsasl2-2_2.1.25.dfsg1-3ubuntu0.1+srt4_i386.deb"; + name = "libsasl2-2_2.1.25.dfsg1-3ubuntu0.1+srt5_i386"; + sha256 = "10hnrhzfxbg2ka3wlhbvg1qd15k5vdbpfxhdi3ip6yynr00zb9zs"; + url = "mirror://steamrt/pool/main/c/cyrus-sasl2/libsasl2-2_2.1.25.dfsg1-3ubuntu0.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libsasl2-2.deb"; }; } rec { - name = "libsdl-image1.2_1.2.10-3+srt4_i386"; - sha256 = "1d3m36a58iwpykc442axj4bd6s4h7f9qq269qfv07i6cyfp2j87l"; - url = "mirror://steamrt/pool/main/s/sdl-image1.2/libsdl-image1.2_1.2.10-3+srt4_i386.deb"; + name = "libsdl-image1.2_1.2.10-3+srt5_i386"; + sha256 = "0iam5axnl4is7avn37jc95c3qxb5zacl5kl2zg5mbnm4wgcywr08"; + url = "mirror://steamrt/pool/main/s/sdl-image1.2/libsdl-image1.2_1.2.10-3+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libsdl-image1.2.deb"; }; } rec { - name = "libsdl-mixer1.2_1.2.11-7+steamrt1+srt4_i386"; - sha256 = "0wij7i9d5g9bbjq4xrvrbzqcsdpjn6dhj1pjn997lpgxsfwyl0nd"; - url = "mirror://steamrt/pool/main/s/sdl-mixer1.2/libsdl-mixer1.2_1.2.11-7+steamrt1+srt4_i386.deb"; + name = "libsdl-mixer1.2_1.2.11-7+steamrt1+srt5_i386"; + sha256 = "1zv4iq7743y2g0zmycq1aj48s06lcmv60f0xig5s9zj8kj5nbg36"; + url = "mirror://steamrt/pool/main/s/sdl-mixer1.2/libsdl-mixer1.2_1.2.11-7+steamrt1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libsdl-mixer1.2.deb"; }; } rec { - name = "libsdl-ttf2.0-0_2.0.9-1.1ubuntu1+srt4_i386"; - sha256 = "1ih95dgbaksgj12x6p7528hywm4zqalv0zyg7k5mp3yfgdxi37xr"; - url = "mirror://steamrt/pool/main/s/sdl-ttf2.0/libsdl-ttf2.0-0_2.0.9-1.1ubuntu1+srt4_i386.deb"; + name = "libsdl-ttf2.0-0_2.0.9-1.1ubuntu1+srt5_i386"; + sha256 = "15rbl3zbmg053ach4d25c988m3kj4gjndj5bz1v1spv46798lya8"; + url = "mirror://steamrt/pool/main/s/sdl-ttf2.0/libsdl-ttf2.0-0_2.0.9-1.1ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libsdl-ttf2.0-0.deb"; }; } rec { - name = "libsdl1.2debian_1.2.15-5+steamrt1+srt4_i386"; - sha256 = "1qsmhdzs2rr13vgagma0yn39x4njx2gixw82l3zmp6b0rp8x0ff9"; - url = "mirror://steamrt/pool/main/libs/libsdl1.2/libsdl1.2debian_1.2.15-5+steamrt1+srt4_i386.deb"; + name = "libsdl1.2debian_1.2.15-5+steamrt1+srt5_i386"; + sha256 = "1da6gg64n9x86ldxns4dfnixxa4sc6bci34sgy08fa3r05aqh84a"; + url = "mirror://steamrt/pool/main/libs/libsdl1.2/libsdl1.2debian_1.2.15-5+steamrt1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libsdl1.2debian.deb"; }; } rec { - name = "libsdl2_2.0.4+steamrt2+srt1_i386"; - sha256 = "1xxj20q6kv4n8g1d1f5pbg1qaqdaq4nigqi2sq4lzmnvzkm8nj91"; - url = "mirror://steamrt/pool/main/libs/libsdl2/libsdl2_2.0.4+steamrt2+srt1_i386.deb"; + name = "libsdl2_2.0.8+steamrt1+srt1_i386"; + sha256 = "0ldraz2giwfhgxbc5m0sf4m1xvp21hx5n9cgqj1civa9plhwyrk7"; + url = "mirror://steamrt/pool/main/libs/libsdl2/libsdl2_2.0.8+steamrt1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libsdl2.deb"; }; } rec { - name = "libsdl2-image_2.0.1+steamrt2+srt1_i386"; - sha256 = "0s7gyc3d0acddzipc4pc89k5cdyjl8ik7pk1znrq0292rnmnwbk4"; - url = "mirror://steamrt/pool/main/libs/libsdl2-image/libsdl2-image_2.0.1+steamrt2+srt1_i386.deb"; + name = "libsdl2-image_2.0.3+steamrt1+srt1_i386"; + sha256 = "006kbbcrzv4bdgpz2w3s0z2q28h5n37ab3995d1zlrpaxmh03i37"; + url = "mirror://steamrt/pool/main/libs/libsdl2-image/libsdl2-image_2.0.3+steamrt1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libsdl2-image.deb"; }; } rec { - name = "libsdl2-mixer_2.0.1+steamrt1+srt1_i386"; - sha256 = "0hqqxqnh8pyvaqhb9rhk20qnf4plrmh3w0n80sfzcn1vjrdcg8mr"; - url = "mirror://steamrt/pool/main/libs/libsdl2-mixer/libsdl2-mixer_2.0.1+steamrt1+srt1_i386.deb"; + name = "libsdl2-mixer_2.0.2+steamrt1+srt1_i386"; + sha256 = "0m27snsrpcr1d7yd9kn8z0symw2fgivx8ndvjxif45w3h8qfkmv1"; + url = "mirror://steamrt/pool/main/libs/libsdl2-mixer/libsdl2-mixer_2.0.2+steamrt1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libsdl2-mixer.deb"; }; } rec { - name = "libsdl2-net_2.0.1+srt1_i386"; - sha256 = "14cn8v8bnllkbj88qy2chlj44m4qrdd6h1x705plwy10qma18iln"; - url = "mirror://steamrt/pool/main/libs/libsdl2-net/libsdl2-net_2.0.1+srt1_i386.deb"; + name = "libsdl2-net_2.0.1+srt2_i386"; + sha256 = "0fk45d366021s31b8vlry93crm1c30fqiq2r4a4yvp9gkhlkww4a"; + url = "mirror://steamrt/pool/main/libs/libsdl2-net/libsdl2-net_2.0.1+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libsdl2-net.deb"; }; } rec { - name = "libsdl2-ttf_2.0.14+srt1_i386"; - sha256 = "06r8vsji64dcswd7mwy9yyacp6pkza8lsa3dwz07yqyb49md9xrv"; - url = "mirror://steamrt/pool/main/libs/libsdl2-ttf/libsdl2-ttf_2.0.14+srt1_i386.deb"; + name = "libsdl2-ttf_2.0.14+srt2_i386"; + sha256 = "0v9myv9d04h5rs9x216qjg2lf6pwnngsbyylzc0fs5rlzshwdk9s"; + url = "mirror://steamrt/pool/main/libs/libsdl2-ttf/libsdl2-ttf_2.0.14+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libsdl2-ttf.deb"; }; } rec { - name = "libselinux1_2.1.0-4.1ubuntu1+srt4_i386"; - sha256 = "19vfb4zlpv25x5428zfm5mkwqgdc229mc3saq32pas3b2faxfan7"; - url = "mirror://steamrt/pool/main/libs/libselinux/libselinux1_2.1.0-4.1ubuntu1+srt4_i386.deb"; + name = "libselinux1_2.1.0-4.1ubuntu1+srt5_i386"; + sha256 = "0s5x224hx0q6j49pvb3bflzyzzi4ryl60sx6sf7y6wi7kplvibvg"; + url = "mirror://steamrt/pool/main/libs/libselinux/libselinux1_2.1.0-4.1ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libselinux1.deb"; }; } rec { - name = "libsm6_1.2.0-2build1+srt4_i386"; - sha256 = "0c1rca5w1m1cqi2a5g9k7zpvkvky6da9hkfg1ar5c8xw4ilw304j"; - url = "mirror://steamrt/pool/main/libs/libsm/libsm6_1.2.0-2build1+srt4_i386.deb"; + name = "libsm6_1.2.0-2build1+srt5_i386"; + sha256 = "07vrs3rarjah3q06yfqqpb38j67s7dv2p30izhjzps7xxj2qfw6d"; + url = "mirror://steamrt/pool/main/libs/libsm/libsm6_1.2.0-2build1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libsm6.deb"; }; } rec { - name = "libsndfile1_1.0.25-4+srt4_i386"; - sha256 = "0pbb7yv86am1x1fd2s15s7ybyz3q1xjlxij8in9dal1bkpj6yhsj"; - url = "mirror://steamrt/pool/main/libs/libsndfile/libsndfile1_1.0.25-4+srt4_i386.deb"; + name = "libsndfile1_1.0.25-4+steamrt1.1ubuntu0.1+srt1_i386"; + sha256 = "0y4hlf67cdlgcfsw03sjsvm2vch8gsasid58y77rzix43saay229"; + url = "mirror://steamrt/pool/main/libs/libsndfile/libsndfile1_1.0.25-4+steamrt1.1ubuntu0.1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libsndfile1.deb"; }; } rec { - name = "libspeex1_1.2~rc1-3ubuntu2+srt4_i386"; - sha256 = "1n2146dh1famhl58i1s4cdp0gyfz89w8vj5msh8hsdjjr8csa83s"; - url = "mirror://steamrt/pool/main/s/speex/libspeex1_1.2~rc1-3ubuntu2+srt4_i386.deb"; + name = "libspeex1_1.2~rc1-3ubuntu2+srt5_i386"; + sha256 = "0d662dxr5dh6dvnz49pii1mqd8k2xk0jaw07sgl7nnd01926xa9p"; + url = "mirror://steamrt/pool/main/s/speex/libspeex1_1.2~rc1-3ubuntu2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libspeex1.deb"; }; } rec { - name = "libspeexdsp1_1.2~rc1-3ubuntu2+srt4_i386"; - sha256 = "0gk0b28d9f7zya9vbmg1kj5xm3k3339ky2n16id3w6aks7lc5y8w"; - url = "mirror://steamrt/pool/main/s/speex/libspeexdsp1_1.2~rc1-3ubuntu2+srt4_i386.deb"; + name = "libspeexdsp1_1.2~rc1-3ubuntu2+srt5_i386"; + sha256 = "1924dczm2sxlfn9ibmp7yvn0chd3y201zhw0a6dv65fwngmzk725"; + url = "mirror://steamrt/pool/main/s/speex/libspeexdsp1_1.2~rc1-3ubuntu2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libspeexdsp1.deb"; }; } rec { - name = "libsqlite3-0_3.7.9-2ubuntu1.2+srt1_i386"; - sha256 = "160pzj7hmqm5hkixj002q81gcqybkv7xn8z8746dw7h90cvlyvrh"; - url = "mirror://steamrt/pool/main/s/sqlite3/libsqlite3-0_3.7.9-2ubuntu1.2+srt1_i386.deb"; + name = "libsqlite3-0_3.7.9-2ubuntu1.2+srt2_i386"; + sha256 = "05cihfj3ap1xwpnlmvl3wdbqrbbm6ic10zbja98c429xxx7y8bgv"; + url = "mirror://steamrt/pool/main/s/sqlite3/libsqlite3-0_3.7.9-2ubuntu1.2+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libsqlite3-0.deb"; }; } rec { - name = "libssl1.0.0_1.0.1-4ubuntu5.33+srt1_i386"; - sha256 = "142c6vwq852mra2i2jp802wfsprd5jia80xn09ms0rxxa1aa7xsk"; - url = "mirror://steamrt/pool/main/o/openssl/libssl1.0.0_1.0.1-4ubuntu5.33+srt1_i386.deb"; + name = "libssl1.0.0_1.0.1-4ubuntu5.36+steamrt1+srt2_i386"; + sha256 = "06gc6qpm51jx0x1imf5nccc3r9x2d41xvfi0wl3p9wvrx6nsna7d"; + url = "mirror://steamrt/pool/main/o/openssl/libssl1.0.0_1.0.1-4ubuntu5.36+steamrt1+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libssl1.0.0.deb"; }; } rec { - name = "libstdc++6_4.8.1-2ubuntu1~12.04+steamrt2+srt1_i386"; - sha256 = "187nknssd0x7r0qsw71f3d06pvwbkqanajah4f7a01xk3hc8cxh1"; - url = "mirror://steamrt/pool/main/g/gcc-4.8/libstdc++6_4.8.1-2ubuntu1~12.04+steamrt2+srt1_i386.deb"; + name = "libstdc++6_5.4.0-7.really.6+steamrt1.1+srt1_i386"; + sha256 = "13kvxng82xz171y3q0i12bvy8z77cqk6s088bjil4b5fq81aaxns"; + url = "mirror://steamrt/pool/main/g/gcc-5/libstdc++6_5.4.0-7.really.6+steamrt1.1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libstdc++6.deb"; }; } rec { - name = "libstdc++6-4.6-pic_4.6.3-1ubuntu5+srt4_i386"; - sha256 = "1j2wsczzlh5jpqyr8k6j72107kmhxa3hdiqm0s648i0fyrks54wp"; - url = "mirror://steamrt/pool/main/g/gcc-4.6/libstdc++6-4.6-pic_4.6.3-1ubuntu5+srt4_i386.deb"; + name = "libstdc++6-4.6-pic_4.6.3-1ubuntu5+steamrt1.1+srt1_i386"; + sha256 = "1xh0hvgw6rrg6k1fbpblxvfdaslwkjlqbgaqjkavkkvl0xmk5k4b"; + url = "mirror://steamrt/pool/main/g/gcc-4.6/libstdc++6-4.6-pic_4.6.3-1ubuntu5+steamrt1.1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libstdc++6-4.6-pic.deb"; }; } rec { - name = "libswscale2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_i386"; - sha256 = "0x3xbbzf643mia8cx9py8vrn9d8c5njxh7x233ylmh8lybac9z5x"; - url = "mirror://steamrt/pool/main/liba/libav/libswscale2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt1_i386.deb"; + name = "libswscale2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_i386"; + sha256 = "1cj7zfhxrb6mvsd8np6q1s1wja2rdd85h2cs9b2pbnlffbr0b9ad"; + url = "mirror://steamrt/pool/main/liba/libav/libswscale2_0.8.13-0ubuntu0.12.04.1+steamrt1+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libswscale2.deb"; }; } rec { - name = "libtasn1-3_2.10-1ubuntu1.4+srt1_i386"; - sha256 = "050w4qc87h9kvniknk62jxpx2i40pl8djbmzbhj2w2lmjbzr7g83"; - url = "mirror://steamrt/pool/main/libt/libtasn1-3/libtasn1-3_2.10-1ubuntu1.4+srt1_i386.deb"; + name = "libtasn1-3_2.10-1ubuntu1.5+srt2_i386"; + sha256 = "12lfinrk76laq7hiddsvi0gskyfgrf7nk2kflqryxwrpf1y34bcl"; + url = "mirror://steamrt/pool/main/libt/libtasn1-3/libtasn1-3_2.10-1ubuntu1.5+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libtasn1-3.deb"; }; } rec { - name = "libtbb2_4.0+r233-1+srt4_i386"; - sha256 = "1ava8m0iv62cb1gi28l486nibd981lsnjbx08b7cg7dd8hjw5lnj"; - url = "mirror://steamrt/pool/main/t/tbb/libtbb2_4.0+r233-1+srt4_i386.deb"; + name = "libtbb2_4.0+r233-1+steamrt2+srt1_i386"; + sha256 = "0ap5ar8v4ljv138p6kga1vzy96v5ilicxsk8lhp1scvcrcaqfppz"; + url = "mirror://steamrt/pool/main/t/tbb/libtbb2_4.0+r233-1+steamrt2+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libtbb2.deb"; }; } rec { - name = "libtdb1_1.2.9-4+srt4_i386"; - sha256 = "17q687bsc7v2jkcvp1y85mnzdq8kdxwlvxib0h5i6v6qvwrj01hn"; - url = "mirror://steamrt/pool/main/t/tdb/libtdb1_1.2.9-4+srt4_i386.deb"; + name = "libtdb1_1.2.9-4+srt5_i386"; + sha256 = "0snf08x6fsjqxs2gzfa7sdxbznq7h347ndawmras84zi0g0bgj6q"; + url = "mirror://steamrt/pool/main/t/tdb/libtdb1_1.2.9-4+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libtdb1.deb"; }; } rec { - name = "libtheora0_1.1.1+dfsg.1-3ubuntu2+srt4_i386"; - sha256 = "0viaqm59q9qbj23s5b4s4mq99imyfv799b6ph78cz2yi6l94qvqx"; - url = "mirror://steamrt/pool/main/libt/libtheora/libtheora0_1.1.1+dfsg.1-3ubuntu2+srt4_i386.deb"; + name = "libtheora0_1.1.1+dfsg.1-3ubuntu2+srt5_i386"; + sha256 = "1jjbd6yyyw5v5wnvsdc3s4gywm9q0mq32n2dr444qs030nkfvcrp"; + url = "mirror://steamrt/pool/main/libt/libtheora/libtheora0_1.1.1+dfsg.1-3ubuntu2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libtheora0.deb"; }; } rec { - name = "libtiff4_3.9.5-2ubuntu1.8+srt1_i386"; - sha256 = "1zyggf4hp7xxd7jn2rahg27vxk1pxpwcvjlrmc3lnp4d2krnf0pq"; - url = "mirror://steamrt/pool/main/t/tiff/libtiff4_3.9.5-2ubuntu1.8+srt1_i386.deb"; + name = "libtiff4_3.9.5-2ubuntu1.9+srt2_i386"; + sha256 = "0law24ini5ailgykff6blxqfj6zz0lfx5a2s5fzgf06s4j1n2cjv"; + url = "mirror://steamrt/pool/main/t/tiff/libtiff4_3.9.5-2ubuntu1.9+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libtiff4.deb"; }; } rec { - name = "libtinfo5_5.9-4+srt4_i386"; - sha256 = "0iy5lalmyr9lv8vm7mc5zdis70ir3x82aav798s4dvwmhzw7a45a"; - url = "mirror://steamrt/pool/main/n/ncurses/libtinfo5_5.9-4+srt4_i386.deb"; + name = "libtinfo5_5.9-4+srt5_i386"; + sha256 = "1476jzkd5mcipafc8cfb03z9yzkxvdxnfc0qa34xq5rbjwcximmd"; + url = "mirror://steamrt/pool/main/n/ncurses/libtinfo5_5.9-4+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libtinfo5.deb"; }; } rec { - name = "libudev0_175-0ubuntu9.2+srt4_i386"; - sha256 = "1wxkfv34nqch3zi4hyshmwbg9s33q7inlz8zl396p22m1q5m5sfx"; - url = "mirror://steamrt/pool/main/u/udev/libudev0_175-0ubuntu9.2+srt4_i386.deb"; + name = "libudev0_175-0ubuntu9.10+srt1_i386"; + sha256 = "089z7vv229w6gnnzwwagixxwn2qcl8gfim1zbagg266vlwqvcyka"; + url = "mirror://steamrt/pool/main/u/udev/libudev0_175-0ubuntu9.10+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libudev0.deb"; }; } rec { - name = "libusb-1.0-0_1.0.19-1+srt1_i386"; - sha256 = "0mmn9l99i595l4fd446jjyh301airh17wbc4wfiigsmz4b4mylb0"; - url = "mirror://steamrt/pool/main/libu/libusb-1.0/libusb-1.0-0_1.0.19-1+srt1_i386.deb"; + name = "libusb-1.0-0_1.0.19-1+srt2_i386"; + sha256 = "1rjnir1gm768xhn4lqb4rdai6wabdfysnlzb47qxxzshpfphycmh"; + url = "mirror://steamrt/pool/main/libu/libusb-1.0/libusb-1.0-0_1.0.19-1+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libusb-1.0-0.deb"; }; } rec { - name = "libuuid1_2.20.1-1ubuntu3+srt4_i386"; - sha256 = "1hcrpngalirqbzqfn209akkizqnm4qpkhp42mcys78xx0i0p5kxr"; - url = "mirror://steamrt/pool/main/u/util-linux/libuuid1_2.20.1-1ubuntu3+srt4_i386.deb"; + name = "libuuid1_2.20.1-1ubuntu3.1+steamrt1.1+srt1_i386"; + sha256 = "1hi8gq8jws689pacx8m0pzjfhrswh8jng39m7vnx2clj7xzfsk5b"; + url = "mirror://steamrt/pool/main/u/util-linux/libuuid1_2.20.1-1ubuntu3.1+steamrt1.1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libuuid1.deb"; }; } rec { - name = "libva-glx1_1.3.1-3+steamrt4+srt1_i386"; - sha256 = "0g7vra6wlgrvpn1cqx1xnckfxn7r2lzh8bk2gs32cdxc4qy7w22r"; - url = "mirror://steamrt/pool/main/libv/libva/libva-glx1_1.3.1-3+steamrt4+srt1_i386.deb"; + name = "libva-glx1_1.7.0-1+steamos1+srt1_i386"; + sha256 = "1q1aasyqlllhj0jhkf7mfcs4n83kj7yddxlsldl77v5x2rhn6ksx"; + url = "mirror://steamrt/pool/main/libv/libva/libva-glx1_1.7.0-1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libva-glx1.deb"; }; } rec { - name = "libva-x11-1_1.3.1-3+steamrt4+srt1_i386"; - sha256 = "0m5p4ciafgdvm4a29z07bcy8gx5n9vr634bwg1x2fj8z5w1y2bnx"; - url = "mirror://steamrt/pool/main/libv/libva/libva-x11-1_1.3.1-3+steamrt4+srt1_i386.deb"; + name = "libva-x11-1_1.7.0-1+steamos1+srt1_i386"; + sha256 = "1pk78g722w8j2zl0hij59p4v3j70am167mdd7f58d179j34v7y8p"; + url = "mirror://steamrt/pool/main/libv/libva/libva-x11-1_1.7.0-1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libva-x11-1.deb"; }; } rec { - name = "libva1_1.3.1-3+steamrt4+srt1_i386"; - sha256 = "1k44nikbgll3zh94p0zgnajjwkaxc0lzc1ss24frq1pzj76jgg54"; - url = "mirror://steamrt/pool/main/libv/libva/libva1_1.3.1-3+steamrt4+srt1_i386.deb"; + name = "libva1_1.7.0-1+steamos1+srt1_i386"; + sha256 = "17rlsh8sv8qymd17c8k1mlk5gb8fkjlgi2swxiaqnyzw40k52bi5"; + url = "mirror://steamrt/pool/main/libv/libva/libva1_1.7.0-1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libva1.deb"; }; } rec { - name = "libvdpau1_0.4.1-3ubuntu1.2+srt1_i386"; - sha256 = "0yya462g7ar6k54bb8aw9qw6zcnzqlzrqjni9w77pm5vbiy1r0yp"; - url = "mirror://steamrt/pool/main/libv/libvdpau/libvdpau1_0.4.1-3ubuntu1.2+srt1_i386.deb"; + name = "libvdpau1_0.4.1-3ubuntu1.2+srt2_i386"; + sha256 = "1qa6bssw4rnyjxw79pfpbhhlwzkxcxg2cx5i8lns5sxg072as5sj"; + url = "mirror://steamrt/pool/main/libv/libvdpau/libvdpau1_0.4.1-3ubuntu1.2+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libvdpau1.deb"; }; } rec { - name = "libvorbis0a_1.3.2-1ubuntu3+srt4_i386"; - sha256 = "0s2m9sa8gyqk56icsb8y65fhfnmbay56a8gy8znz690l8aq6fcvl"; - url = "mirror://steamrt/pool/main/libv/libvorbis/libvorbis0a_1.3.2-1ubuntu3+srt4_i386.deb"; + name = "libvorbis0a_1.3.2-1ubuntu3+srt5_i386"; + sha256 = "01hkk2wxqx5fj7qsi00h4al8ddvymhziyzdpzr025bd0ibhgqayg"; + url = "mirror://steamrt/pool/main/libv/libvorbis/libvorbis0a_1.3.2-1ubuntu3+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libvorbis0a.deb"; }; } rec { - name = "libvorbisenc2_1.3.2-1ubuntu3+srt4_i386"; - sha256 = "1848325zzklbdc03a738jvs0jpgypjd11sw80qv47i73zmc0wnfz"; - url = "mirror://steamrt/pool/main/libv/libvorbis/libvorbisenc2_1.3.2-1ubuntu3+srt4_i386.deb"; + name = "libvorbisenc2_1.3.2-1ubuntu3+srt5_i386"; + sha256 = "0v26kx6b98mj2glhmd6nsk2zqh3ra6jln1c9ksrq4abxda4qqril"; + url = "mirror://steamrt/pool/main/libv/libvorbis/libvorbisenc2_1.3.2-1ubuntu3+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libvorbisenc2.deb"; }; } rec { - name = "libvorbisfile3_1.3.2-1ubuntu3+srt4_i386"; - sha256 = "0p63wgif2h9q6pd61mfpl63qa1m12344d5nkrd6daq47hmldfibw"; - url = "mirror://steamrt/pool/main/libv/libvorbis/libvorbisfile3_1.3.2-1ubuntu3+srt4_i386.deb"; + name = "libvorbisfile3_1.3.2-1ubuntu3+srt5_i386"; + sha256 = "0l9d7z87fpa8zkfg96709hfpx6jr0zrd5pvjz193jaj5165kamkh"; + url = "mirror://steamrt/pool/main/libv/libvorbis/libvorbisfile3_1.3.2-1ubuntu3+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libvorbisfile3.deb"; }; } rec { - name = "libvpx1_1.0.0-1+srt4_i386"; - sha256 = "1dkpqaaclks24kw4wdbzfnkdbsf4yz3j8ygfl6w0y3w2sxwcxldl"; - url = "mirror://steamrt/pool/main/libv/libvpx/libvpx1_1.0.0-1+srt4_i386.deb"; + name = "libvpx1_1.0.0-2+srt1_i386"; + sha256 = "08yngwr92m787ycpsc798kgpyw6ixks55kmqmadjp8zx43pjzaai"; + url = "mirror://steamrt/pool/main/libv/libvpx/libvpx1_1.0.0-2+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libvpx1.deb"; }; } rec { - name = "libvulkan1_1.0.3~git20160215-0.1+steamos5+srt1_i386"; - sha256 = "1fir2kw66z14pfs6zqa5i620c9rli075dk9mj9802d723hr78ylh"; - url = "mirror://steamrt/pool/main/v/vulkan-loader/libvulkan1_1.0.3~git20160215-0.1+steamos5+srt1_i386.deb"; + name = "libvulkan1_1.1.73+dfsg-1+steamosc2+srt1_i386"; + sha256 = "0g9f3nk2bq8knqqs6qplw39p729zxqnxyyhipnziqy8h38bilj86"; + url = "mirror://steamrt/pool/main/v/vulkan/libvulkan1_1.1.73+dfsg-1+steamosc2+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libvulkan1.deb"; }; } rec { - name = "libwind0-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386"; - sha256 = "06vhdm7d6h7cihk97v5bf2b8mb5z1ncca1yfahcxmgykm0amq89w"; - url = "mirror://steamrt/pool/main/h/heimdal/libwind0-heimdal_1.6~git20120311.dfsg.1-2+srt4_i386.deb"; + name = "libwind0-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386"; + sha256 = "1xzj4q5wk1pjflqqd85cx1788sd89fjdjgwv4qlwyn76magxi7kh"; + url = "mirror://steamrt/pool/main/h/heimdal/libwind0-heimdal_1.6~git20120311.dfsg.1-2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libwind0-heimdal.deb"; }; } rec { - name = "libwrap0_7.6.q-21+srt4_i386"; - sha256 = "07qszw3j351x9vwz5q6qvzanp291xn27zif1ir5khdwidr5lb58b"; - url = "mirror://steamrt/pool/main/t/tcp-wrappers/libwrap0_7.6.q-21+srt4_i386.deb"; + name = "libwrap0_7.6.q-21+srt5_i386"; + sha256 = "1lhp9v9cpi5dgk0wdrivr50b0g3l4fy8cjgnjai25hb65w2hj33n"; + url = "mirror://steamrt/pool/main/t/tcp-wrappers/libwrap0_7.6.q-21+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libwrap0.deb"; }; } rec { - name = "libx11-6_1.4.99.1-0ubuntu2.3+steamrt1+srt1_i386"; - sha256 = "0wsr47fjfvjxz0ks07va0mqs8d6b8prll5512hvivj6hf6x8cngm"; - url = "mirror://steamrt/pool/main/libx/libx11/libx11-6_1.4.99.1-0ubuntu2.3+steamrt1+srt1_i386.deb"; + name = "libx11-6_1.6.3-1ubuntu2.1+srt1_i386"; + sha256 = "0mvg378ja1znf6qf5228bmijrznhhzw3r7lxizk9iwhz5pm6h2pm"; + url = "mirror://steamrt/pool/main/libx/libx11/libx11-6_1.6.3-1ubuntu2.1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libx11-6.deb"; }; } rec { - name = "libx11-data_1.4.99.1-0ubuntu2.3+steamrt1+srt1_all"; - sha256 = "17mygha6q5480ajgv1f4wmgwr3l3zxh92yagh4qfsm6r1j2a5dma"; - url = "mirror://steamrt/pool/main/libx/libx11/libx11-data_1.4.99.1-0ubuntu2.3+steamrt1+srt1_all.deb"; + name = "libx11-data_1.6.3-1ubuntu2.1+srt1_all"; + sha256 = "1imsbk4mg6n1083gjjv6kssm5g842xlbg40vsc4dw97myxycpncw"; + url = "mirror://steamrt/pool/main/libx/libx11/libx11-data_1.6.3-1ubuntu2.1+srt1_all.deb"; source = fetchurl { inherit url sha256; name = "libx11-data.deb"; }; } rec { - name = "libx11-xcb1_1.4.99.1-0ubuntu2.3+steamrt1+srt1_i386"; - sha256 = "11fhyqvfbs0jf71cnmld09q23abvnrzgp20zabrvi2r5vk0ai6f9"; - url = "mirror://steamrt/pool/main/libx/libx11/libx11-xcb1_1.4.99.1-0ubuntu2.3+steamrt1+srt1_i386.deb"; + name = "libx11-xcb1_1.6.3-1ubuntu2.1+srt1_i386"; + sha256 = "0vpnnsa4ayvin11c9gl5c8bbaplz1z6pm28k0fhfhla5ggq1kd46"; + url = "mirror://steamrt/pool/main/libx/libx11/libx11-xcb1_1.6.3-1ubuntu2.1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libx11-xcb1.deb"; }; } rec { - name = "libxau6_1.0.6-4+srt4_i386"; - sha256 = "0pw507i7nfr1zqjf8ysjzqgml053bwlac2jxv78b2rp3l3xky4sp"; - url = "mirror://steamrt/pool/main/libx/libxau/libxau6_1.0.6-4+srt4_i386.deb"; + name = "libxau6_1.0.6-4+srt5_i386"; + sha256 = "1q5qryha5ng0cjcalz5qxd38djxd5n7kb2fnz9mnp4cy2vk5jhmq"; + url = "mirror://steamrt/pool/main/libx/libxau/libxau6_1.0.6-4+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxau6.deb"; }; } rec { - name = "libxaw7_1.0.9-3ubuntu1+srt4_i386"; - sha256 = "172kg32mck6v60cy7bxb3wpmhn09jay6lg0mghb65f57bkqb539v"; - url = "mirror://steamrt/pool/main/libx/libxaw/libxaw7_1.0.9-3ubuntu1+srt4_i386.deb"; + name = "libxaw7_1.0.9-3ubuntu1+srt5_i386"; + sha256 = "17085yj7x9hncbgxw5jsi4inn17f6wzdx2akzv9v3l6hvhy8kmkl"; + url = "mirror://steamrt/pool/main/libx/libxaw/libxaw7_1.0.9-3ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxaw7.deb"; }; } rec { - name = "libxcb-composite0_1.10-2ubuntu1+srt4_i386"; - sha256 = "0m28k3pwgscxzbp4vhrncv12l0940s22qc8lrgzb0vi5ha4vb1zk"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-composite0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-composite0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "00zfy06nf78gs7ji222lcy1cwzsqfbng9119cgkw5c1z25x0q6a5"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-composite0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-composite0.deb"; }; } rec { - name = "libxcb-damage0_1.10-2ubuntu1+srt4_i386"; - sha256 = "0z180s301vq0bpnv18hqad3n5hsipv6svjgiwacq9c4srryn22af"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-damage0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-damage0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "09y48s64kp0maldv9bwwpj8ahrssvrik8xmqzjgvxcxpblb1zfb7"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-damage0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-damage0.deb"; }; } rec { - name = "libxcb-doc_1.10-2ubuntu1+srt4_all"; - sha256 = "0zq3xcrlr2wjp3386bf5h1z63hapmkpnw45l1fz17chdngcmj358"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-doc_1.10-2ubuntu1+srt4_all.deb"; + name = "libxcb-doc_1.11.1-1ubuntu1+steamos1+srt1_all"; + sha256 = "0aly1y78gdv9vkxqgs6ir7sdifn0bvsbflp05x7jmq0zlgpcg0nz"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-doc_1.11.1-1ubuntu1+steamos1+srt1_all.deb"; source = fetchurl { inherit url sha256; name = "libxcb-doc.deb"; }; } rec { - name = "libxcb-dpms0_1.10-2ubuntu1+srt4_i386"; - sha256 = "1k66jz8ms3mwbmkfdg9xb9wn77igwrkhjrvg6lw847c2f5rrxwp7"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-dpms0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-dpms0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "085b0qhf15kaw9msmsk8jxp4rk7fym506jmiaqxh1i6wgr66ys86"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-dpms0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-dpms0.deb"; }; } rec { - name = "libxcb-dri2-0_1.10-2ubuntu1+srt4_i386"; - sha256 = "00r0pcda8hc7sq1nj93621p55743dys424fi3n26hdmdky9j0rks"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-dri2-0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-dri2-0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "1nwdr550axxca7p438c3g9jb4y2zf8gxyd3756vav4jp1n57i1rq"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-dri2-0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-dri2-0.deb"; }; } rec { - name = "libxcb-dri3-0_1.10-2ubuntu1+srt4_i386"; - sha256 = "0lgg6b8sxd6s22vn7vwiyb9vz39v124y9w74g6krxqmfvbkfva2x"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-dri3-0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-dri3-0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "1vjklblpkdrki48dn890920nx8gcj25sxqp24qkpxja8samvl6gr"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-dri3-0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-dri3-0.deb"; }; } rec { - name = "libxcb-glx0_1.10-2ubuntu1+srt4_i386"; - sha256 = "142f73f4mkvad2l238kyf0xl4kwzgcpcww33ah3rx4qjz7q3ails"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-glx0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-glx0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "0zwc8c896bka6wi5jri78q1pq5ppsi5dwih9rwfl5c96p6r4lbr6"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-glx0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-glx0.deb"; }; } rec { - name = "libxcb-present0_1.10-2ubuntu1+srt4_i386"; - sha256 = "0rlnxwazwrp7kpgh6d6dbfzk5cjvlqp31qxgifd4b8fryjnan91f"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-present0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-present0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "0cd4jsyj1r6b7nm8g6342f8dafghzd1dc0k61iw3qncwx949j3gy"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-present0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-present0.deb"; }; } rec { - name = "libxcb-randr0_1.10-2ubuntu1+srt4_i386"; - sha256 = "0qg20vdidpbl6jar9w4n65jfmg907fkqrk2nwh6qj0l3xd90pm61"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-randr0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-randr0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "1vfrbkq1qqjp0278j70jcldls2g9rmkh9ifb6pnqznagqsrrhwy7"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-randr0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-randr0.deb"; }; } rec { - name = "libxcb-record0_1.10-2ubuntu1+srt4_i386"; - sha256 = "1kyjdazkvykcg76yp3gyy2pgj07nwbjld7q0ci96q1zka3a3m4sz"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-record0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-record0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "0gy7l161idc59a6q8vhgq1krknwmd1cyh5ss2vhp7qznxwh9bd7j"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-record0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-record0.deb"; }; } rec { - name = "libxcb-render0_1.10-2ubuntu1+srt4_i386"; - sha256 = "1r77z60hz0bblg07szl6yir6ll697w0w1y37bd66wv9n4cdlijqd"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-render0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-render0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "0gl7389h5ppfd3p30v8vmwl4kxvsqjhmhazszs7mdgalfjwkf9rf"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-render0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-render0.deb"; }; } rec { - name = "libxcb-res0_1.10-2ubuntu1+srt4_i386"; - sha256 = "1xnnyczipj30kzkyrwngkra2m3xc8jchzd88a3afgy4m6cy6qyyy"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-res0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-res0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "1ca5lk12qncrfkjakjb7yl5f5x41b3ynn3d9wk6paqrchhfn7yir"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-res0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-res0.deb"; }; } rec { - name = "libxcb-screensaver0_1.10-2ubuntu1+srt4_i386"; - sha256 = "155m47mnjbn9b5p895syyfxk9pk1sh76qj614k554rf77nwdx8rq"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-screensaver0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-screensaver0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "0sz49j0z7zl2mx7cf6kw4ljzsbik92az35yj9i0426p1zaqzx0vs"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-screensaver0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-screensaver0.deb"; }; } rec { - name = "libxcb-shape0_1.10-2ubuntu1+srt4_i386"; - sha256 = "0wm9mm8xyh70zdc7iz8j3y89n2c5yhd72kq68nbxqpnwrz3kyzcz"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-shape0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-shape0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "1mycsk8ixdn7c8c4ma4vbrilhcdjxqz92nzv9rwxf96vr0dj4bhd"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-shape0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-shape0.deb"; }; } rec { - name = "libxcb-shm0_1.10-2ubuntu1+srt4_i386"; - sha256 = "0ifvwv0jq4crsgzfpbssa4p9r1jk7mck4wlpfq5j11aiijyw5fq6"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-shm0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-shm0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "1w0d53d8hgzr5ql9is7x4dap6ny6bfp041qa6hldmg8jbw3x8wc3"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-shm0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-shm0.deb"; }; } rec { - name = "libxcb-sync1_1.10-2ubuntu1+srt4_i386"; - sha256 = "0wsf356qiv9frxky8c503bb7nsksrgn9zii7h2yp7v5wsxpi20p5"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-sync1_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-sync1_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "1pd0pw5q7h28p0j6h4889dq7fpvkjwclsmg96m6sl7a3459cp6b0"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-sync1_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-sync1.deb"; }; } rec { - name = "libxcb-xevie0_1.10-2ubuntu1+srt4_i386"; - sha256 = "1qynissbyb4ihyyy61nhlm4nqsm5akyfkdfyw38id6qiyh1hnml9"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xevie0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-xevie0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "0nf3s5jff5psab8mv9avkflgwfj2pmbrvc3pyy743b9cwzv7q85p"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xevie0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xevie0.deb"; }; } rec { - name = "libxcb-xf86dri0_1.10-2ubuntu1+srt4_i386"; - sha256 = "013mhdbavmaqvw99k52p45lzfri1fhyclg6hdzb3xgswzilq1wn4"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xf86dri0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-xf86dri0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "149dgslf6hhngjjkhdvrsl3hjx3l2llvnwv6jgnc8hqvz7ck1i1h"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xf86dri0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xf86dri0.deb"; }; } rec { - name = "libxcb-xfixes0_1.10-2ubuntu1+srt4_i386"; - sha256 = "0szrbzqjks1g77x572r3dvkv791k1c8lckcgk6a7wl4pygsksd3m"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xfixes0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-xfixes0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "1rjynbvfxxzm5x07xxfq40qhs7b5pwassn1f7j02q3685swqmk0z"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xfixes0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xfixes0.deb"; }; } rec { - name = "libxcb-xinerama0_1.10-2ubuntu1+srt4_i386"; - sha256 = "0h01rmw1h93xd1vhz06v7ckjzy89ingi6c6b2sl6sxdd7ii9fkni"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xinerama0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-xinerama0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "0m0v4c50104c2khx9vcsf3v3xyl031xv2yladxfp168gchrczyk9"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xinerama0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xinerama0.deb"; }; } rec { - name = "libxcb-xkb1_1.10-2ubuntu1+srt4_i386"; - sha256 = "07yq1khdrisvgkpbvl39kq1f3kwaqxvyn6jfcib2lcg6w5cbk9n8"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xkb1_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-xkb1_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "0d56vivs4ykanc1v3pbn9mzgcyw4ffx7c59ck1758g2vxfvi837w"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xkb1_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xkb1.deb"; }; } rec { - name = "libxcb-xprint0_1.10-2ubuntu1+srt4_i386"; - sha256 = "13dxk56nga9imkx07fb1s4fmgki0dnhcbb41pzr1r0ybxg6crnk9"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xprint0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-xprint0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "0gclf7sgd661820bqqj3aabykxp0m38y3wd9m25znqgqqg5bk6im"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xprint0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xprint0.deb"; }; } rec { - name = "libxcb-xtest0_1.10-2ubuntu1+srt4_i386"; - sha256 = "11ajwd0456dr4nwhkib31zwgk7xpyzir86pvjrgpydnh6yj3dic0"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xtest0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-xtest0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "0swkpx39gd9n553qrc8dhdv4vvnan1byrkvy935zzimzxv8phxfm"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xtest0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xtest0.deb"; }; } rec { - name = "libxcb-xv0_1.10-2ubuntu1+srt4_i386"; - sha256 = "0xkj414c0svlndqck1ghddc424a7mpxwaw44sdjw25iwsidzqi7i"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xv0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-xv0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "0mi49k0xfk34x71ap4q9wy4p7cs31z25pg0p41yr859q4y49461r"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xv0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xv0.deb"; }; } rec { - name = "libxcb-xvmc0_1.10-2ubuntu1+srt4_i386"; - sha256 = "109bkl63vbsmhflqw3ivjdas96jamq5jjh67rf4lvpgxnlscxsgw"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xvmc0_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb-xvmc0_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "068y30y9ry4hlfc4dsza47z6lakfz2cy0zkdq5rn3nbs59d7f2nh"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb-xvmc0_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb-xvmc0.deb"; }; } rec { - name = "libxcb1_1.10-2ubuntu1+srt4_i386"; - sha256 = "1n3ppygmfjy4hwgi4lq2xlm1ldlp47g67ksafbs3zd06a7lyq2rb"; - url = "mirror://steamrt/pool/main/libx/libxcb/libxcb1_1.10-2ubuntu1+srt4_i386.deb"; + name = "libxcb1_1.11.1-1ubuntu1+steamos1+srt1_i386"; + sha256 = "0sga5mjr5bk5w0mdq0y2hxfdhpfpzv9m9anfy2zkaw60gy6n0qk6"; + url = "mirror://steamrt/pool/main/libx/libxcb/libxcb1_1.11.1-1ubuntu1+steamos1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcb1.deb"; }; } rec { - name = "libxcomposite1_0.4.3-2build1+srt4_i386"; - sha256 = "1ga6g4mdz02p4m6l3q7fa8404243qhqfrvvcwinbm9hj8fyshliz"; - url = "mirror://steamrt/pool/main/libx/libxcomposite/libxcomposite1_0.4.3-2build1+srt4_i386.deb"; + name = "libxcomposite1_0.4.3-2build1+srt5_i386"; + sha256 = "1c23iswcyi5axg5hql3kkfmcvxkzjl1db9klrlsqb2c0455pjlsf"; + url = "mirror://steamrt/pool/main/libx/libxcomposite/libxcomposite1_0.4.3-2build1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcomposite1.deb"; }; } rec { - name = "libxcursor1_1.1.12-1ubuntu0.1+srt4_i386"; - sha256 = "0nalkn0hql9v13b48685jrlcx607n5bn6gk5vmhbq0zpcs2ww709"; - url = "mirror://steamrt/pool/main/libx/libxcursor/libxcursor1_1.1.12-1ubuntu0.1+srt4_i386.deb"; + name = "libxcursor1_1.1.12-1ubuntu0.1+srt5_i386"; + sha256 = "18321skl4h2s3izzaaw1jk2blfq93ygk4b2f2g4mnkipn1i9rybx"; + url = "mirror://steamrt/pool/main/libx/libxcursor/libxcursor1_1.1.12-1ubuntu0.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxcursor1.deb"; }; } rec { - name = "libxdamage1_1.1.3-2build1+srt4_i386"; - sha256 = "0qysvz8hwcra2kr8sd9iyk1x73wawfnhsq5yspjphq08kg2k5gmq"; - url = "mirror://steamrt/pool/main/libx/libxdamage/libxdamage1_1.1.3-2build1+srt4_i386.deb"; + name = "libxdamage1_1.1.3-2build1+srt5_i386"; + sha256 = "01pam4srj0d3vyrrhlsnfkznpxgil3p674i0armxqfydzh4bww8q"; + url = "mirror://steamrt/pool/main/libx/libxdamage/libxdamage1_1.1.3-2build1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxdamage1.deb"; }; } rec { - name = "libxdmcp6_1.1.0-4+srt4_i386"; - sha256 = "0hxixf0y2l3wc6flfg2gwlfc3fp40rg570lwkr0r6hwj1z0zwyf8"; - url = "mirror://steamrt/pool/main/libx/libxdmcp/libxdmcp6_1.1.0-4+srt4_i386.deb"; + name = "libxdmcp6_1.1.0-4+srt5_i386"; + sha256 = "0vz6w11yld3ii0b3i68wwzx7qsgd64yj8709h32db08izc1a2wdh"; + url = "mirror://steamrt/pool/main/libx/libxdmcp/libxdmcp6_1.1.0-4+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxdmcp6.deb"; }; } rec { - name = "libxext6_1.3.0-3ubuntu0.2+steamrt1+srt1_i386"; - sha256 = "0s6jc1zw6n2m3bmis62pr3mkzd64migzrj5wcl9hmq5yrnc46shs"; - url = "mirror://steamrt/pool/main/libx/libxext/libxext6_1.3.0-3ubuntu0.2+steamrt1+srt1_i386.deb"; + name = "libxext6_1.3.0-3ubuntu0.2+steamrt1+srt2_i386"; + sha256 = "11jjds6qk9wvx446rph5n2qsr9b36jlr99ayw98zr89b3y6y8lyf"; + url = "mirror://steamrt/pool/main/libx/libxext/libxext6_1.3.0-3ubuntu0.2+steamrt1+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libxext6.deb"; }; } rec { - name = "libxfixes3_5.0-4ubuntu4.4+srt1_i386"; - sha256 = "0y5fb7nrnydlxbflhxqw065qz337m2i87sdn4730pd8y693sinyz"; - url = "mirror://steamrt/pool/main/libx/libxfixes/libxfixes3_5.0-4ubuntu4.4+srt1_i386.deb"; + name = "libxfixes3_5.0-4ubuntu4.4+srt2_i386"; + sha256 = "19rm8s1dq7vysijlksbac04045x5j4g30s377im4ydljjh2vajh6"; + url = "mirror://steamrt/pool/main/libx/libxfixes/libxfixes3_5.0-4ubuntu4.4+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libxfixes3.deb"; }; } rec { - name = "libxft2_2.2.0-3ubuntu2+srt4_i386"; - sha256 = "087wclc31napmxc7l09gc73dgjczdkcyrld6zdcq6jq8jm1aq4vk"; - url = "mirror://steamrt/pool/main/x/xft/libxft2_2.2.0-3ubuntu2+srt4_i386.deb"; + name = "libxft2_2.2.0-3ubuntu2+srt5_i386"; + sha256 = "0pcd8bvdlh41bixbdkrl0sm6libgns7ndjzyvj86s3qks7k11g97"; + url = "mirror://steamrt/pool/main/x/xft/libxft2_2.2.0-3ubuntu2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxft2.deb"; }; } rec { - name = "libxi6_1.7.1.901-1ubuntu1~precise3+srt1_i386"; - sha256 = "0zx652d5gr6dvviwpn5v0mhd9812pcha7xs9z7il3s01d75qcysk"; - url = "mirror://steamrt/pool/main/libx/libxi/libxi6_1.7.1.901-1ubuntu1~precise3+srt1_i386.deb"; + name = "libxi6_1.7.1.901-1ubuntu1~precise3+srt2_i386"; + sha256 = "0pykpahh9j7cp91mbkqw22drl5npq3pbd712chbrmkdjdqm14x9p"; + url = "mirror://steamrt/pool/main/libx/libxi/libxi6_1.7.1.901-1ubuntu1~precise3+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libxi6.deb"; }; } rec { - name = "libxinerama1_1.1.1-3ubuntu0.1+srt4_i386"; - sha256 = "16dci5p6amsj1d474ih3avpjc1kc406wz6ywb9f6m44qrnm96w9m"; - url = "mirror://steamrt/pool/main/libx/libxinerama/libxinerama1_1.1.1-3ubuntu0.1+srt4_i386.deb"; + name = "libxinerama1_1.1.1-3ubuntu0.1+srt5_i386"; + sha256 = "0xd0rfr6h25s3h6n8in5kby4fm88s1ykw2y8clymk79znmgby0av"; + url = "mirror://steamrt/pool/main/libx/libxinerama/libxinerama1_1.1.1-3ubuntu0.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxinerama1.deb"; }; } rec { - name = "libxml2_2.7.8.dfsg-5.1ubuntu4.14+srt1_i386"; - sha256 = "0gld5pbh1qh93nafvw6fx319av0hpfxp54pg3w4svi1cg7hj9rk2"; - url = "mirror://steamrt/pool/main/libx/libxml2/libxml2_2.7.8.dfsg-5.1ubuntu4.14+srt1_i386.deb"; + name = "libxml2_2.7.8.dfsg-5.1ubuntu4.17+srt1_i386"; + sha256 = "1ss7fpdqdgm8hmcgm1d59x5mfr4n7zps8bjg1304nn29a3cck26z"; + url = "mirror://steamrt/pool/main/libx/libxml2/libxml2_2.7.8.dfsg-5.1ubuntu4.17+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxml2.deb"; }; } rec { - name = "libxmu6_1.1.0-3+srt4_i386"; - sha256 = "0vvxp9fr2rykqny2r1qz6h5vqw26zv5lkh9nyw8jvrv9gx01rma0"; - url = "mirror://steamrt/pool/main/libx/libxmu/libxmu6_1.1.0-3+srt4_i386.deb"; + name = "libxmu6_1.1.0-3+srt5_i386"; + sha256 = "0z39zacqis2cq1gdwam1wk5xmisdhsrly7r1a8g5h8h6hbrri72w"; + url = "mirror://steamrt/pool/main/libx/libxmu/libxmu6_1.1.0-3+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxmu6.deb"; }; } rec { - name = "libxpm4_3.5.9-4+srt4_i386"; - sha256 = "0s7pxkhfx84axldwpznv1wj9z05zm90fpp11702lm3qic6829sk1"; - url = "mirror://steamrt/pool/main/libx/libxpm/libxpm4_3.5.9-4+srt4_i386.deb"; + name = "libxpm4_3.5.9-4+steamrt1.1ubuntu0.1+srt1_i386"; + sha256 = "02k70n6v245l0kqf7gjjv4bm12zmxcw8cayjv9xh8cp6svsxdzsq"; + url = "mirror://steamrt/pool/main/libx/libxpm/libxpm4_3.5.9-4+steamrt1.1ubuntu0.1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxpm4.deb"; }; } rec { - name = "libxrandr2_1.3.2-2ubuntu0.3+srt1_i386"; - sha256 = "08392ac5sqsdq4r4p8n88c3d2nn0078y510grdrxp9z006f89846"; - url = "mirror://steamrt/pool/main/libx/libxrandr/libxrandr2_1.3.2-2ubuntu0.3+srt1_i386.deb"; + name = "libxrandr2_1.5.0-1+srt1_i386"; + sha256 = "10nqrxs2dxs06wah8dy48v7v8vdllpg9wwhcn67i7dkgfli27ykj"; + url = "mirror://steamrt/pool/main/libx/libxrandr/libxrandr2_1.5.0-1+srt1_i386.deb"; source = fetchurl { inherit url sha256; name = "libxrandr2.deb"; }; } rec { - name = "libxrender1_0.9.6-2ubuntu0.2+srt1_i386"; - sha256 = "08dj2kx2kr50jxcyfdj9y9gajkz1lnm6jn9z2pvqf43hzfa4pmp2"; - url = "mirror://steamrt/pool/main/libx/libxrender/libxrender1_0.9.6-2ubuntu0.2+srt1_i386.deb"; + name = "libxrender1_0.9.6-2ubuntu0.2+srt2_i386"; + sha256 = "0i48bi4zfv90dgc190mr8wd8hymbhdldrk1q2qag0l9fmn5hkwqv"; + url = "mirror://steamrt/pool/main/libx/libxrender/libxrender1_0.9.6-2ubuntu0.2+srt2_i386.deb"; source = fetchurl { inherit url sha256; name = "libxrender1.deb"; }; } rec { - name = "libxss1_1.2.1-2+srt4_i386"; - sha256 = "1zf5ifqq8s6xr3iiwhjk3g2ifrb9srwanffsdjab28jzfpsb4a9h"; - url = "mirror://steamrt/pool/main/libx/libxss/libxss1_1.2.1-2+srt4_i386.deb"; + name = "libxss1_1.2.1-2+srt5_i386"; + sha256 = "015n1l1hl4vvgb53zx6gisl44p2pjj339adabqlfy1fqwjf0ff4z"; + url = "mirror://steamrt/pool/main/libx/libxss/libxss1_1.2.1-2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxss1.deb"; }; } rec { - name = "libxt6_1.1.1-2ubuntu0.1+srt4_i386"; - sha256 = "1f01dzslhcm0r89p6wzs1pv32gaqxhxs3jim4jbzrkv18d4pyyc6"; - url = "mirror://steamrt/pool/main/libx/libxt/libxt6_1.1.1-2ubuntu0.1+srt4_i386.deb"; + name = "libxt6_1.1.1-2ubuntu0.1+srt5_i386"; + sha256 = "0yqb6j6rh9y65bfbqv1hrggl1719lsm6yzydbmpnilz15p3f4sa9"; + url = "mirror://steamrt/pool/main/libx/libxt/libxt6_1.1.1-2ubuntu0.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxt6.deb"; }; } rec { - name = "libxtst6_1.2.0-4ubuntu0.1+srt4_i386"; - sha256 = "0w64xxfakharkmh0w9y6pg5446a7zypqhs3wgj6dbsa7clly8ir8"; - url = "mirror://steamrt/pool/main/libx/libxtst/libxtst6_1.2.0-4ubuntu0.1+srt4_i386.deb"; + name = "libxtst6_1.2.0-4ubuntu0.1+srt5_i386"; + sha256 = "1h21nyc2bigm3brpzmdaafvry4wszmykbs13vagmibwhb6rls7xd"; + url = "mirror://steamrt/pool/main/libx/libxtst/libxtst6_1.2.0-4ubuntu0.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxtst6.deb"; }; } rec { - name = "libxxf86vm1_1.1.1-2ubuntu0.1+srt4_i386"; - sha256 = "1xbxlzmhl8j64k2aayrmpdz9bxn7b6jirdk84qibwh96fna4gd2x"; - url = "mirror://steamrt/pool/main/libx/libxxf86vm/libxxf86vm1_1.1.1-2ubuntu0.1+srt4_i386.deb"; + name = "libxxf86vm1_1.1.1-2ubuntu0.1+srt5_i386"; + sha256 = "133xi181g1pcd08px9yz7wqz93axy0cq9x5y76qp34dj7i9pscsg"; + url = "mirror://steamrt/pool/main/libx/libxxf86vm/libxxf86vm1_1.1.1-2ubuntu0.1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "libxxf86vm1.deb"; }; } rec { - name = "nvidia-cg-toolkit_3.0.0016-0ubuntu1+srt4_i386"; - sha256 = "1m4r0mp1i44rlddjjrmmbqi1phg2ksdn5zb4bxjrf55m2zfkgkx3"; - url = "mirror://steamrt/pool/main/n/nvidia-cg-toolkit/nvidia-cg-toolkit_3.0.0016-0ubuntu1+srt4_i386.deb"; + name = "nvidia-cg-toolkit_3.0.0016-0ubuntu1+srt5_i386"; + sha256 = "0nvhk0xyi1cc12j2j97x763irk2d9l8n0p3fjyg7s3jgm4va3yjj"; + url = "mirror://steamrt/pool/main/n/nvidia-cg-toolkit/nvidia-cg-toolkit_3.0.0016-0ubuntu1+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "nvidia-cg-toolkit.deb"; }; } rec { - name = "zenity_3.4.0-0ubuntu4+steamrt2+srt4_i386"; - sha256 = "162554nhfmpjyyf1pzc35gsbawz4f6n1bm4s8n0923g1hmafpf6g"; - url = "mirror://steamrt/pool/main/z/zenity/zenity_3.4.0-0ubuntu4+steamrt2+srt4_i386.deb"; + name = "zenity_3.4.0-0ubuntu4+steamrt2+srt5_i386"; + sha256 = "04j0mbdcv8891apw3lak161fbvpyl8qykvqvn6ljl3mimf3qabcd"; + url = "mirror://steamrt/pool/main/z/zenity/zenity_3.4.0-0ubuntu4+steamrt2+srt5_i386.deb"; source = fetchurl { inherit url sha256; name = "zenity.deb"; }; } rec { - name = "zlib1g_1.2.3.4.dfsg-3ubuntu4+srt4_i386"; - sha256 = "0gcw3qr6w418idwd69i12hjr90ixnab81d1p3wi7d0rwl1227ihv"; - url = "mirror://steamrt/pool/main/z/zlib/zlib1g_1.2.3.4.dfsg-3ubuntu4+srt4_i386.deb"; + name = "zlib1g_1.2.3.4.dfsg-3ubuntu4+srt6_i386"; + sha256 = "1qbqclnhhwfxj5ajsb05c3pg5iq5imf4pl6yisx5hw5jndgmzch7"; + url = "mirror://steamrt/pool/main/z/zlib/zlib1g_1.2.3.4.dfsg-3ubuntu4+srt6_i386.deb"; source = fetchurl { inherit url sha256; name = "zlib1g.deb"; diff --git a/pkgs/games/steam/update-runtime.py b/pkgs/games/steam/update-runtime.py index c225d6bf8adc..aed42cdd5668 100755 --- a/pkgs/games/steam/update-runtime.py +++ b/pkgs/games/steam/update-runtime.py @@ -1,5 +1,6 @@ -#!/usr/bin/env python2 -# +#! /usr/bin/env nix-shell +#! nix-shell -i python2 -p "with python2Packages; [python debian]" + # Script to build a Nix script to actually build a Steam runtime. # Patched version of https://github.com/ValveSoftware/steam-runtime/blob/master/build-runtime.py @@ -20,7 +21,7 @@ REPO="http://repo.steampowered.com/steamrt" DIST="scout" COMPONENT="main" -out = open("runtime-generated.nix", "w"); +out = open("runtime-generated.nix", "w") out.write("# This file is autogenerated! Do not edit it yourself, use update-runtime.py for regeneration.\n") out.write("{ fetchurl }:\n") out.write("\n") diff --git a/pkgs/misc/brightnessctl/default.nix b/pkgs/misc/brightnessctl/default.nix index f90baee91fcf..6292b8183b28 100644 --- a/pkgs/misc/brightnessctl/default.nix +++ b/pkgs/misc/brightnessctl/default.nix @@ -11,20 +11,18 @@ stdenv.mkDerivation rec { sha256 = "1n1gb8ldgqv3vs565yhk1w4jfvrviczp94r8wqlkv5q6ab43c8w9"; }; - makeFlags = [ "MODE=0755" "PREFIX=" "DESTDIR=$(out)" ]; - installTargets = [ "install" "install_udev_rules" ]; + makeFlags = [ "PREFIX=" "DESTDIR=$(out)" ]; postPatch = '' substituteInPlace 90-brightnessctl.rules --replace /bin/ ${coreutils}/bin/ - substituteInPlace 90-brightnessctl.rules --replace %k '*' ''; - meta = { + meta = with stdenv.lib; { homepage = "https://github.com/Hummer12007/brightnessctl"; - maintainers = [ stdenv.lib.maintainers.Dje4321 ]; - license = stdenv.lib.licenses.mit; description = "This program allows you read and control device brightness"; - platforms = stdenv.lib.platforms.linux; + license = licenses.mit; + maintainers = with maintainers; [ megheaiulian ]; + platforms = platforms.linux; }; } diff --git a/pkgs/misc/cups/drivers/brlaser/default.nix b/pkgs/misc/cups/drivers/brlaser/default.nix index 46c38892bf8f..08cc222e4a5b 100644 --- a/pkgs/misc/cups/drivers/brlaser/default.nix +++ b/pkgs/misc/cups/drivers/brlaser/default.nix @@ -14,7 +14,7 @@ stdenv.mkDerivation rec { nativeBuildInputs = [ cmake ]; buildInputs = [ zlib cups ]; - cmakeFlags = [ "-DCUPS_SERVER_BIN=$out/lib/cups" "-DCUPS_DATA_DIR=$out/share/cups" ]; + cmakeFlags = [ "-DCUPS_SERVER_BIN=lib/cups" "-DCUPS_DATA_DIR=share/cups" ]; meta = with stdenv.lib; { description = "A CUPS driver for Brother laser printers"; diff --git a/pkgs/misc/cups/drivers/splix/default.nix b/pkgs/misc/cups/drivers/splix/default.nix index 9cb9aa3ec582..012b37959d8f 100644 --- a/pkgs/misc/cups/drivers/splix/default.nix +++ b/pkgs/misc/cups/drivers/splix/default.nix @@ -31,6 +31,7 @@ in stdenv.mkDerivation { }; postPatch = '' + mv -v *.ppd ppd/ substituteInPlace src/pstoqpdl.cpp \ --replace "RASTERDIR \"/\" RASTERTOQPDL" "\"$out/lib/cups/filter/rastertoqpdl\"" \ --replace "RASTERDIR" "\"${cups-filters}/lib/cups/filter\"" \ diff --git a/pkgs/misc/drivers/sc-controller/default.nix b/pkgs/misc/drivers/sc-controller/default.nix index 9de0ba277789..b504002b7d9a 100644 --- a/pkgs/misc/drivers/sc-controller/default.nix +++ b/pkgs/misc/drivers/sc-controller/default.nix @@ -7,13 +7,13 @@ buildPythonApplication rec { pname = "sc-controller"; - version = "0.4.4"; + version = "0.4.5"; src = fetchFromGitHub { owner = "kozec"; repo = pname; rev = "v${version}"; - sha256 = "0ki9x28i5slpnygkpdglcvj8cssvvjyz732y1cnpzw1f0sj0kris"; + sha256 = "0mb9r4811rfj5rs4vrdhaf3x38iy1fvxr4sk2zg3xhvc29cdf5wv"; }; nativeBuildInputs = [ wrapGAppsHook ]; @@ -24,10 +24,6 @@ buildPythonApplication rec { checkInputs = [ pytest ]; - patches = [ - ./fix-udev.patch # fix upstream issue #401, remove with the next update - ]; - postPatch = '' substituteInPlace scc/paths.py --replace sys.prefix "'$out'" substituteInPlace scc/uinput.py --replace /usr/include ${linuxHeaders}/include diff --git a/pkgs/misc/emulators/retroarch/default.nix b/pkgs/misc/emulators/retroarch/default.nix index a37d299fbf70..24b46c8f9caa 100644 --- a/pkgs/misc/emulators/retroarch/default.nix +++ b/pkgs/misc/emulators/retroarch/default.nix @@ -1,5 +1,5 @@ { stdenv, fetchFromGitHub, which, pkgconfig, makeWrapper -, ffmpeg, libGLU_combined, freetype, libxml2, python34 +, ffmpeg, libGLU_combined, freetype, libxml2, python3 , libobjc, AppKit, Foundation , alsaLib ? null , libpulseaudio ? null @@ -39,7 +39,7 @@ in stdenv.mkDerivation rec { nativeBuildInputs = [ pkgconfig ] ++ optional withVulkan [ makeWrapper ]; - buildInputs = [ ffmpeg freetype libxml2 libGLU_combined python34 SDL2 which ] + buildInputs = [ ffmpeg freetype libxml2 libGLU_combined python3 SDL2 which ] ++ optional enableNvidiaCgToolkit nvidia_cg_toolkit ++ optional withVulkan [ vulkan-loader ] ++ optionals stdenv.isDarwin [ libobjc AppKit Foundation ] diff --git a/pkgs/misc/gnuk/generic.nix b/pkgs/misc/gnuk/generic.nix index 22aaa2d1cb57..80a4518f3f70 100644 --- a/pkgs/misc/gnuk/generic.nix +++ b/pkgs/misc/gnuk/generic.nix @@ -1,4 +1,4 @@ -{ stdenv, gcc-arm-embedded, makeWrapper +{ stdenv, gcc-arm-embedded, binutils-arm-embedded, makeWrapper , python, pythonPackages # Extra options @@ -14,7 +14,7 @@ stdenv.mkDerivation { inherit src; - nativeBuildInputs = [ gcc-arm-embedded makeWrapper ]; + nativeBuildInputs = [ gcc-arm-embedded binutils-arm-embedded makeWrapper ]; buildInputs = [ python ] ++ (with pythonPackages; [ pyusb colorama ]); configurePhase = '' diff --git a/pkgs/misc/gnuk/git.nix b/pkgs/misc/gnuk/git.nix deleted file mode 100644 index 142c4a0e7e5f..000000000000 --- a/pkgs/misc/gnuk/git.nix +++ /dev/null @@ -1,11 +0,0 @@ -{ callPackage, fetchgit, ... } @ args: - -callPackage ./generic.nix (args // rec { - version = "2015-04-22"; - - src = fetchgit { - url = "git://git.gniibe.org/gnuk/gnuk.git"; - rev = "3d5a776ab15a4ae6e17d91341a58eda3db09f700"; - sha256 = "1f9l1rwy630z8cnjd6lfv0zp6ij3c9ifbm3fym245049hh2xds7v"; - }; -}) diff --git a/pkgs/misc/gnuk/unstable.nix b/pkgs/misc/gnuk/unstable.nix deleted file mode 100644 index 16dbe5d21fc8..000000000000 --- a/pkgs/misc/gnuk/unstable.nix +++ /dev/null @@ -1,11 +0,0 @@ -{ callPackage, fetchgit, ... } @ args: - -callPackage ./generic.nix (args // rec { - version = "1.1.4"; - - src = fetchgit { - url = "git://git.gniibe.org/gnuk/gnuk.git"; - rev = "e7e8b9f5ca414a5c901f61b0f043c8da42414103"; - sha256 = "0js9dc1iyvrrcb0d8a2irivrli3yb7mxmpxws5a2n53hj5xc4n6l"; - }; -}) diff --git a/pkgs/misc/themes/matcha/default.nix b/pkgs/misc/themes/matcha/default.nix index 9967de786399..6e14d1587a75 100644 --- a/pkgs/misc/themes/matcha/default.nix +++ b/pkgs/misc/themes/matcha/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "matcha-${version}"; - version = "2018-10-21"; + version = "2018-10-30"; src = fetchFromGitHub { owner = "vinceliuice"; repo = "matcha"; rev = version; - sha256 = "112xfnwlq9ih72qbfrin78ly7bc4i94my3i6s7yhc46qg1lncl73"; + sha256 = "1ks30xm7jhyxgs0blxxnc9ygmyfwrwc9k8d0y0i6yb7608p8zxzq"; }; buildInputs = [ gdk_pixbuf librsvg ]; diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix index 4c6c577ce6d1..d9ceb20e9412 100644 --- a/pkgs/misc/vim-plugins/generated.nix +++ b/pkgs/misc/vim-plugins/generated.nix @@ -33,12 +33,12 @@ }; agda-vim = buildVimPluginFrom2Nix { - name = "agda-vim-2018-05-23"; + name = "agda-vim-2018-10-29"; src = fetchFromGitHub { owner = "derekelkins"; repo = "agda-vim"; - rev = "24169e70c1dbd784349b1551b6a3753680d9bb87"; - sha256 = "1bn2g89dvwccfl4ki07jb8iydb3d0s4rm7z5gv5q1bv3lccndax6"; + rev = "75853188f15175728e938e1e69da8916148d7f7a"; + sha256 = "1xv3il21fl602hilb3hk1r2bsbnf8brjyv61hprxsj8xd2s36a4d"; }; }; @@ -53,12 +53,12 @@ }; ale = buildVimPluginFrom2Nix { - name = "ale-2018-10-03"; + name = "ale-2018-10-31"; src = fetchFromGitHub { owner = "w0rp"; repo = "ale"; - rev = "e984497ec9dc8a465c2873d64c51629c9a559111"; - sha256 = "074s3rgd71nvnanzz1ivd3xpji3qqnsd4ix9ka2xajlscn7i5x6q"; + rev = "4b841b55869e3ec5b02806f9b2fe962ffdca2750"; + sha256 = "0wa8phv4b6n1akaii8qy9c0lr17vm4bqgz5chjx28zs73jfxsf2i"; }; }; @@ -93,22 +93,22 @@ }; awesome-vim-colorschemes = buildVimPluginFrom2Nix { - name = "awesome-vim-colorschemes-2018-01-20"; + name = "awesome-vim-colorschemes-2018-10-30"; src = fetchFromGitHub { owner = "rafi"; repo = "awesome-vim-colorschemes"; - rev = "8d2b6657bdbe4f7253e320c741bc4c1fc2f2f41d"; - sha256 = "1wfm6rsmyqldxwcz0ic4rq7kf00fgsx00rg42cl9yya35nqiri2z"; + rev = "21d1c93da95d58bead99f3226f9447f5b035afe1"; + sha256 = "1niwwyxgq7k7mbi05lnpz12lbmn9mam9x4qvzxcbvxsqqp2zzsj8"; }; }; base16-vim = buildVimPluginFrom2Nix { - name = "base16-vim-2018-05-24"; + name = "base16-vim-2018-10-08"; src = fetchFromGitHub { owner = "chriskempson"; repo = "base16-vim"; - rev = "fcce6bce6a2f4b14eea7ea388031c0aa65e4b67d"; - sha256 = "0wi8k80v2brmxqbkk0lrvl4v2sslkjfwpvflm55b3n0ii8qy39nk"; + rev = "7e9af12d680d81cc1277c07ef5acee8c83828f3f"; + sha256 = "1al00wf0bf61r0bfsfbq8g2qq8sbzj6z8c85787d3qfinvniz0cl"; }; }; @@ -123,12 +123,12 @@ }; calendar-vim = buildVimPluginFrom2Nix { - name = "calendar-vim-2018-08-05"; + name = "calendar-vim-2018-10-23"; src = fetchFromGitHub { owner = "itchyny"; repo = "calendar.vim"; - rev = "1f20b779171d4d3a20abd47508692fbae32e3188"; - sha256 = "01aiaslaww117kdwf7qxjc647g6bxcqr694mi3l0llblq549ih5l"; + rev = "3c6a7677543824aab0eb9946d376fe5d45a935c5"; + sha256 = "0jnk2hi9n1p7fqclifiyckrcady6fbkag6z29v7n6bbzhvz0qzzs"; }; }; @@ -204,12 +204,12 @@ }; committia-vim = buildVimPluginFrom2Nix { - name = "committia-vim-2018-09-16"; + name = "committia-vim-2018-10-23"; src = fetchFromGitHub { owner = "rhysd"; repo = "committia.vim"; - rev = "7d762c61b3907249cc1f13ec19c72ccd02ed1ade"; - sha256 = "0sq40m748xmjqqwhvkgly9205h1q5c7d70wzahjbnnzqi5mlk4pb"; + rev = "d367190c7ffe95f4ac5d30b2e9da4cd9898579b9"; + sha256 = "1yqsdy1mxc775qcrcl1yi930m2q6364mgjdj06vwnph1rg98w0ql"; }; }; @@ -264,12 +264,12 @@ }; csv-vim = buildVimPluginFrom2Nix { - name = "csv-vim-2018-09-26"; + name = "csv-vim-2018-10-04"; src = fetchFromGitHub { owner = "chrisbra"; repo = "csv.vim"; - rev = "41e9bd08371c253e7c8d1cb4d16066f8132c5a1c"; - sha256 = "1fvlw39a8vv3vxrpsg6f25is3drp2j83giydp06h3fyzgqgqfsfx"; + rev = "7aa17f00a6cc96b9c9c364c6786c24f97c04605b"; + sha256 = "06mdnpfch0rfhwdwqp4dhg7qx1gwsmkd6dlsd1ypc44r7wdjk38d"; }; }; @@ -304,12 +304,12 @@ }; ctrlp-vim = buildVimPluginFrom2Nix { - name = "ctrlp-vim-2018-09-13"; + name = "ctrlp-vim-2018-10-28"; src = fetchFromGitHub { owner = "ctrlpvim"; repo = "ctrlp.vim"; - rev = "ebc568c3992d9002d1d35b85737dfa0d9ce70d9f"; - sha256 = "0hh4wcyx0smv70axn18gdscmcmhwbbccam9klx0c613qccl5w70i"; + rev = "5e40e555d31d9cce2188d9fa724d1debcad28aa6"; + sha256 = "1skn8p527541w1kynk08dfpai2wlbmylw5sa4z2b7kmmnxa1lq47"; }; }; @@ -334,22 +334,22 @@ }; denite-nvim = buildVimPluginFrom2Nix { - name = "denite-nvim-2018-09-30"; + name = "denite-nvim-2018-10-28"; src = fetchFromGitHub { owner = "Shougo"; repo = "denite.nvim"; - rev = "3ffc9a27dd6c2ae4c98f0a153564ee64da2722b2"; - sha256 = "1q1rh1nw90g04jghc4jhaccssv1r7lc69ij00b3v2253ld9bdmlv"; + rev = "0a089bb122eb88e182420334a4f1df0c22917856"; + sha256 = "1virb8lr591jbzmb91dhki32jx9g15a89dsxbh0vy9lcawaikypj"; }; }; deol-nvim = buildVimPluginFrom2Nix { - name = "deol-nvim-2018-10-03"; + name = "deol-nvim-2018-10-12"; src = fetchFromGitHub { owner = "Shougo"; repo = "deol.nvim"; - rev = "61283778287107a5e2a80b360d6d53610a27774f"; - sha256 = "099dqlrz5baycrgz27m8hk6xy103jrdgph1yg7nmkchavvjp2rz1"; + rev = "04a5295ebad2df1a2141b85dc0b78cc51ea86fb4"; + sha256 = "1v5qip8kzrsq8qmmjrvhm15d9wrn48iz2s62qddcgvc0sdzk1y64"; }; }; @@ -365,23 +365,23 @@ }; deoplete-go = buildVimPluginFrom2Nix { - name = "deoplete-go-2018-09-30"; + name = "deoplete-go-2018-10-20"; src = fetchFromGitHub { owner = "zchee"; repo = "deoplete-go"; - rev = "5b2c70947eaeafabe3d5429527dc0fbd7e1aad64"; - sha256 = "0vwsd5mpyaa4ixqavqvxc0b0515v9iidqzxzv1di73xlxrmaghzi"; + rev = "8bb6d5f51ca825ef88d474c8aa9231692d6c2961"; + sha256 = "15qwhkx24m7drahksrsvvpdzj9wpm0k1722ry6sdwgd40q8d3jrh"; fetchSubmodules = true; }; }; deoplete-jedi = buildVimPluginFrom2Nix { - name = "deoplete-jedi-2018-09-18"; + name = "deoplete-jedi-2018-10-24"; src = fetchFromGitHub { owner = "zchee"; repo = "deoplete-jedi"; - rev = "d49b166458784585dc0cbfb0d7643bc02eba3dd8"; - sha256 = "1dza6bzij0f8bfs7k9j954f8xccjjcrc7wrcgrm1qw0d2jbm4bgq"; + rev = "4ffb3a5ace39143813d63c7f78137bf8478b91e9"; + sha256 = "1fik8snm6f7f337qidlkkhgri756rgyaswk3ndfiqw5vj673r4dw"; fetchSubmodules = true; }; }; @@ -417,42 +417,42 @@ }; deoplete-nvim = buildVimPluginFrom2Nix { - name = "deoplete-nvim-2018-10-03"; + name = "deoplete-nvim-2018-10-28"; src = fetchFromGitHub { owner = "Shougo"; repo = "deoplete.nvim"; - rev = "63fb188c547eb5ccf8cd713a33fbb7c80ac03ec9"; - sha256 = "1f2cfqyc17b8jvd0a2qw0njaw8ac15zbsnjvnwls3wm1f9mmhh6g"; + rev = "aa43a5f03b7b995841b416c40e8bbc8bcbf9b1a2"; + sha256 = "1ixjrf1rrdznfprd9w5fx86k0ni67c9amgvwwbbzhqz3i1zgwc3g"; }; }; dhall-vim = buildVimPluginFrom2Nix { - name = "dhall-vim-2018-07-30"; + name = "dhall-vim-2018-10-25"; src = fetchFromGitHub { owner = "vmchale"; repo = "dhall-vim"; - rev = "2693bfaf9167ac69ee96c1165b4354f03f4d8b24"; - sha256 = "0qm6z8z70cxqqlmxgq497w96nv5sn2gbxnc74balbhpk17bms4m0"; + rev = "aac9deeb695c810fee8a702fc5fca99a26f1d4bd"; + sha256 = "17avn55dixv0rxhc3jzpnadkvldrbq7r81nwgnzi4xlr3fjxjwfc"; }; }; echodoc-vim = buildVimPluginFrom2Nix { - name = "echodoc-vim-2018-09-30"; + name = "echodoc-vim-2018-10-20"; src = fetchFromGitHub { owner = "Shougo"; repo = "echodoc.vim"; - rev = "4e229bdc8fadf9842ce873665b63149db200adbf"; - sha256 = "0xqh1fdi89nph3f400bxqdsp6j0pcxi7l3ay4wldxlljhpva20zr"; + rev = "3fa121e0a0abee0762867a01b25f4e891594da6e"; + sha256 = "17qckl9x1yd70zxgwvpkh5nwx8zs5f6d8xismd0rbpigd08qd06q"; }; }; editorconfig-vim = buildVimPluginFrom2Nix { - name = "editorconfig-vim-2018-07-25"; + name = "editorconfig-vim-2018-10-14"; src = fetchFromGitHub { owner = "editorconfig"; repo = "editorconfig-vim"; - rev = "2c3e5323609d97ad7bda6fc22ae1f7746caab3d4"; - sha256 = "0a1nszrhxh9ixp5n47w89ijkvjk3rf29ypiz5blf4pnja39r336x"; + rev = "736451ae203c5e3bcce39f1be11d68009b783d82"; + sha256 = "01j2y02z23ylydkm7yij2m9nimk54m06ik2hyldj99yz8qi5vp18"; fetchSubmodules = true; }; }; @@ -468,12 +468,12 @@ }; ensime-vim = buildVimPluginFrom2Nix { - name = "ensime-vim-2018-04-20"; + name = "ensime-vim-2018-10-10"; src = fetchFromGitHub { owner = "ensime"; repo = "ensime-vim"; - rev = "634cce6eae10a31cd6eec259890bdcda326ee3c2"; - sha256 = "03sr53680kcwxaa5xbqzdfbsgday3bkzja33wym49w9gjmlaa320"; + rev = "caa734e84f002b25446c615706283a74edd4ecfe"; + sha256 = "190qq8r2zs7xzmsag7ygk6dvpav3cnzlc40lc3fvwmkfwgci5zg0"; }; }; @@ -498,12 +498,12 @@ }; ferret = buildVimPluginFrom2Nix { - name = "ferret-2018-03-23"; + name = "ferret-2018-10-18"; src = fetchFromGitHub { owner = "wincent"; repo = "ferret"; - rev = "b1ef0cf4af92c3a896821597d0d1a44b9c93dc5a"; - sha256 = "1gpbk396a7pihi6pg2jmxwv6nibprbcr8fg73kxs6kj0d60wgasy"; + rev = "984f0364f8a4ea77c7075e67cd753037ecfdafdf"; + sha256 = "0vis6zgknjmwjhv5vxiv4k5d78971sv61rjc8gh32sq2ksxk07zr"; }; }; @@ -549,12 +549,12 @@ }; fzf-vim = buildVimPluginFrom2Nix { - name = "fzf-vim-2018-10-01"; + name = "fzf-vim-2018-10-22"; src = fetchFromGitHub { owner = "junegunn"; repo = "fzf.vim"; - rev = "c6275ee1080de4d94bb3f3cfd6e7cc0ccecd9e64"; - sha256 = "1xy7yk4d9p7mbk8s9nj5kqihdgb4a4b004ivbnxwappj52znzw1g"; + rev = "50707b089b1c61fcdb300ec1ecbc4249ead4af11"; + sha256 = "1h0x701jcj2zwyzaxlzzfax3z8jxrn255wawxcjw9fskz9kldd68"; }; }; @@ -648,6 +648,16 @@ }; }; + iceberg-vim = buildVimPluginFrom2Nix { + name = "iceberg-vim-2018-10-17"; + src = fetchFromGitHub { + owner = "cocopon"; + repo = "iceberg.vim"; + rev = "0a18b0fbfdcdace35ee7ff4397ab6932d6dae1da"; + sha256 = "1p5x8kzxs491c2naxqhmqwdk85p3b6qr1aini746qm9ks5afhcgn"; + }; + }; + idris-vim = buildVimPluginFrom2Nix { name = "idris-vim-2017-12-04"; src = fetchFromGitHub { @@ -708,6 +718,17 @@ }; }; + jedi-vim = buildVimPluginFrom2Nix { + name = "jedi-vim-2018-10-14"; + src = fetchFromGitHub { + owner = "davidhalter"; + repo = "jedi-vim"; + rev = "b6dfc5fd49c26d4dbe9f54c814956567a7a9b3a8"; + sha256 = "11wvynjl1m23vdp4wvirhmm7vnpji5affbyhwz67yjkvh6c42xqa"; + fetchSubmodules = true; + }; + }; + Jenkinsfile-vim-syntax = buildVimPluginFrom2Nix { name = "Jenkinsfile-vim-syntax-2018-09-25"; src = fetchFromGitHub { @@ -719,12 +740,12 @@ }; julia-vim = buildVimPluginFrom2Nix { - name = "julia-vim-2018-10-01"; + name = "julia-vim-2018-10-21"; src = fetchFromGitHub { owner = "JuliaEditorSupport"; repo = "julia-vim"; - rev = "6e218a18d7b753423c59790105feb33d0388e2d0"; - sha256 = "1wl3djm8fc44da6srvw7g3r1xi5j6742wjbz8i98qalai5fkcibd"; + rev = "934618a71bcf64ff0fb94780dc1aefa58e81470a"; + sha256 = "1pw4snax7ibxhd8xff41lb86vk7a38yrcq85p89sis6nln6larq5"; }; }; @@ -809,12 +830,12 @@ }; ncm2 = buildVimPluginFrom2Nix { - name = "ncm2-2018-09-30"; + name = "ncm2-2018-10-15"; src = fetchFromGitHub { owner = "ncm2"; repo = "ncm2"; - rev = "02a263f7e38ee9569d8338da2d1cab2708b59150"; - sha256 = "0gz3vyv9a3kl3bd3mq7qlgkfvz1p9gnk7fjjb7bsabayq3854di9"; + rev = "4aaf9e1e313109d32fd2b64a5299416357d901b2"; + sha256 = "09rg3pa0yirhsn1x558k3bzh6fyy4whnfqlm89wvmzxw6rm8xnpw"; }; }; @@ -889,12 +910,12 @@ }; neco-vim = buildVimPluginFrom2Nix { - name = "neco-vim-2017-10-01"; + name = "neco-vim-2018-10-30"; src = fetchFromGitHub { owner = "Shougo"; repo = "neco-vim"; - rev = "f5397c5e800d65a58c56d8f1b1b92686b05f4ca9"; - sha256 = "0yb7ja6qgrazszk4i01cwjj00j9vd43zs2r11b08iy8n10jnzr73"; + rev = "4c0203b44f8daa7e2f72e2514488d637e8a766a4"; + sha256 = "03v3h2ks6y9pl960lnvzxlfhnn6l2pcn6d6012znw2wqpralrjq2"; }; }; @@ -909,12 +930,12 @@ }; neodark-vim = buildVimPluginFrom2Nix { - name = "neodark-vim-2018-05-26"; + name = "neodark-vim-2018-10-17"; src = fetchFromGitHub { owner = "KeitaNakamura"; repo = "neodark.vim"; - rev = "c966731b54a64b379ca5519c25d3cedb90df1d31"; - sha256 = "0rimpx3569lr4whg7lc0nym0irminwf6r6f2wr320pdhhfx7a0ch"; + rev = "e95e924081f95ec18d9b6d7239a445db982669e8"; + sha256 = "11mib0yf3kq626r9afw1127w2hxbqci3fgvh3lfl36mk06sm1qqb"; }; }; @@ -939,12 +960,12 @@ }; neomake = buildVimPluginFrom2Nix { - name = "neomake-2018-10-01"; + name = "neomake-2018-10-29"; src = fetchFromGitHub { owner = "benekastah"; repo = "neomake"; - rev = "a6715ed7df767ac75166b22305232687f47f5be8"; - sha256 = "0g8rm6y9vvzy1wxrxwjg6y0vw8na727z7mvjf8d20zmscpvmarj0"; + rev = "c15d51ea9f622b8bce469a18833a6ac64f6a1193"; + sha256 = "1l15y0di6k4v0vrwpd86lp2n5ljfjnzncgpxwmbhqb2xznr7caq7"; }; }; @@ -969,22 +990,22 @@ }; neosnippet-vim = buildVimPluginFrom2Nix { - name = "neosnippet-vim-2018-07-30"; + name = "neosnippet-vim-2018-10-23"; src = fetchFromGitHub { owner = "Shougo"; repo = "neosnippet.vim"; - rev = "70700ddef65f8f0639b336d04a0d2dbdc4eb0830"; - sha256 = "0szhmdqqgpfy6shwiw7wnsd06cz8c7v5zmpaa3hzs32gyrx49rza"; + rev = "32583e605ebe96bba805bdf0d526b951345c8b3e"; + sha256 = "105jnnw35ffxwx6zqazh6rizwqdndqc3n656xhljfng33c0lr5mk"; }; }; neoyank-vim = buildVimPluginFrom2Nix { - name = "neoyank-vim-2018-03-26"; + name = "neoyank-vim-2018-10-17"; src = fetchFromGitHub { owner = "Shougo"; repo = "neoyank.vim"; - rev = "ea3cd47ccb40cb2e26cb607d28475aa0fdb26fef"; - sha256 = "1zbf8062rpk56nd1zxqhwa8bdpxl9zp887l9nm4s9hc4ndsk4928"; + rev = "ba337d80769c4f2f19c04df4349a196f52fe5094"; + sha256 = "0sq595xlijz6xsil2z21kf4662cvmzzm6bsvysfz43wgl16dd5s6"; }; }; @@ -999,12 +1020,12 @@ }; nerdtree = buildVimPluginFrom2Nix { - name = "nerdtree-2018-09-17"; + name = "nerdtree-2018-10-31"; src = fetchFromGitHub { owner = "scrooloose"; repo = "nerdtree"; - rev = "599238ad99642e8767c4be6adda75bd84afdfd42"; - sha256 = "1yjx254lmwil42hild0nprxpb26rw84872cnxrzaqfljwsyq7wwv"; + rev = "8d005db94f8d1a214d172aeb1008d016c3d201e2"; + sha256 = "0f8dljl45ph668kwjf0py0891i3aqfdijplarxnblbkp2zn5ij7g"; }; }; @@ -1059,22 +1080,22 @@ }; nvimdev-nvim = buildVimPluginFrom2Nix { - name = "nvimdev-nvim-2018-09-08"; + name = "nvimdev-nvim-2018-10-05"; src = fetchFromGitHub { owner = "neovim"; repo = "nvimdev.nvim"; - rev = "cf5acd7712524886881efdba8f2e4cee0f133ed9"; - sha256 = "02jqgbkzn47xljv6kk1lk6gzq3c900lfs2s4dpg1vapd5n0yi4am"; + rev = "ef05db6817d8083f8daf9ddd99b79acc364d57a6"; + sha256 = "1c44pwsjllhcmlabz9pc9qb5p6lgilfzdsx4rcjc8q8ixijc7w99"; }; }; onehalf = buildVimPluginFrom2Nix { - name = "onehalf-2018-09-16"; + name = "onehalf-2018-10-21"; src = fetchFromGitHub { owner = "sonph"; repo = "onehalf"; - rev = "ecc3d8d5691b8d3b39345a4400e631638bc078f7"; - sha256 = "13w5n64wlwp70m74j2k12csm6ajq7jwgg7dq25azwrvxixi3iy9p"; + rev = "9c2afdf4254cb6029c8b57f69b5018ba15c3ad9f"; + sha256 = "0qvf3zjw1c9b7am4imqip5xgdn92rx1dph2q4fi1jwxd23d9jd5d"; }; }; @@ -1219,12 +1240,12 @@ }; riv-vim = buildVimPluginFrom2Nix { - name = "riv-vim-2018-06-20"; + name = "riv-vim-2018-10-17"; src = fetchFromGitHub { owner = "Rykka"; repo = "riv.vim"; - rev = "fb6d6f8c9d85128fd69c74f11bb7413addc002e8"; - sha256 = "1mjp90lz6jf3w9j4h1sidz7kfxhi9hk27pdnvb0hrvxw0q3bj9ch"; + rev = "09ae81f1fcf43d77a36705a7b9201f8cc1c85e23"; + sha256 = "0a3zzyxz2djy8dwmqjvhfqsingll28dnmnqdw0yii8r4xqxg6a8v"; }; }; @@ -1249,12 +1270,12 @@ }; rust-vim = buildVimPluginFrom2Nix { - name = "rust-vim-2018-09-16"; + name = "rust-vim-2018-10-26"; src = fetchFromGitHub { owner = "rust-lang"; repo = "rust.vim"; - rev = "5e4672c8ba490d2663c34d89616729b36b294594"; - sha256 = "189vjd2v271h4634i1fxi9g1sfxkgsb087454na67jrz1pwd8xvw"; + rev = "039b7c7c4f0b9fec9879027d6700229c33daae3e"; + sha256 = "09g9q91qvbrrb2hrybdw6p8jm3q3v9j9yffpm9q0nz6g8p6zi8xq"; }; }; @@ -1349,12 +1370,12 @@ }; syntastic = buildVimPluginFrom2Nix { - name = "syntastic-2018-10-03"; + name = "syntastic-2018-10-18"; src = fetchFromGitHub { owner = "scrooloose"; repo = "syntastic"; - rev = "df9f7057d18f996b9e40c9c57eea3e016350abdf"; - sha256 = "1yrs2yli39wjvmwnzsxg57i6kldhcmbwr90cqgbf6qi09rba828p"; + rev = "89e485c7f8b1f285b43bb397394f22b79021aac1"; + sha256 = "0xy54pllpr2bn1wp2fhq5nwrjpcclp61mhzls99cbzzpxfiwirlz"; }; }; @@ -1409,12 +1430,12 @@ }; targets-vim = buildVimPluginFrom2Nix { - name = "targets-vim-2018-05-27"; + name = "targets-vim-2018-10-24"; src = fetchFromGitHub { owner = "wellle"; repo = "targets.vim"; - rev = "c3042dc18acc0dfcee479310d3efc6aefe92db75"; - sha256 = "0shnlgwrxzrd0m3k6hnmr66i2l4zknp0pn7f71d2frx937gih34q"; + rev = "19586689fab6f1ff81743a675645f62adf745b0b"; + sha256 = "0bvx3dynbsralywkhsi9yjr188ayczp263di3y00dzwymxh7m1p5"; }; }; @@ -1469,22 +1490,22 @@ }; tsuquyomi = buildVimPluginFrom2Nix { - name = "tsuquyomi-2018-08-03"; + name = "tsuquyomi-2018-10-31"; src = fetchFromGitHub { owner = "Quramy"; repo = "tsuquyomi"; - rev = "05e6515f6d21545959ac4eb570c917e1d225b1f1"; - sha256 = "0hbd2d8zb86c8ncrrm4zyj92j523xay2lwk2k9arwacn8fj42hir"; + rev = "bdd034d06ed47176ec1ee0bd3dae5bc0aeb053e3"; + sha256 = "119dxmkarbh0b0k4l59mxr19shks4mv96j3mbz02q0kdq18bgrdq"; }; }; typescript-vim = buildVimPluginFrom2Nix { - name = "typescript-vim-2018-08-15"; + name = "typescript-vim-2018-10-17"; src = fetchFromGitHub { owner = "leafgarland"; repo = "typescript-vim"; - rev = "db131b8cd42973ed26928e9e445c1a745a98cff8"; - sha256 = "1l7wbwv3xirl9nvjb2f693knxsif5qanjknd9lija8m7gnwagzm4"; + rev = "0e9d92eead2df21abe342c4341c55536dd36b0af"; + sha256 = "1mf8cwkppfnxgjjgy762m1zbxmqxb9fpgxr6kbcjsi8qhzip0cvd"; }; }; @@ -1499,12 +1520,12 @@ }; undotree = buildVimPluginFrom2Nix { - name = "undotree-2018-09-17"; + name = "undotree-2018-10-15"; src = fetchFromGitHub { owner = "mbbill"; repo = "undotree"; - rev = "c15a0409d9d5a7eacf18d3061a8a37d114532765"; - sha256 = "0iaj69cc7ysylql43ybprsls9liprmg46ak9mmbh1vjgny2c1nf0"; + rev = "9172c17f6d07405f14707ff273e3ca9f35aa9e42"; + sha256 = "12z9y7lljhq3gsxpn1ivyf2cvasc0br3fdkdhnrz305zxib97r5q"; }; }; @@ -1519,32 +1540,32 @@ }; verilog_systemverilog-vim = buildVimPluginFrom2Nix { - name = "verilog_systemverilog-vim-2018-09-29"; + name = "verilog_systemverilog-vim-2018-10-22"; src = fetchFromGitHub { owner = "vhda"; repo = "verilog_systemverilog.vim"; - rev = "b82caf39715d7645bd6229e033bea5bb5144ae8c"; - sha256 = "0i7bqg9aw6c3f0zhs7rq38m44xv7qlhhg0nabnhpk2xkw84cms69"; + rev = "4809e36569363bc3b44c981cda842d5bb31e95ff"; + sha256 = "124ak7596b19rz4vk2f05z6wkfhfrlawlz0y4am8fm4y1mdxsprm"; }; }; vim = buildVimPluginFrom2Nix { - name = "vim-2018-09-20"; + name = "vim-2018-10-30"; src = fetchFromGitHub { owner = "dracula"; repo = "vim"; - rev = "15d0ff9f1a1a5455201dbf62221e8b119cfa9161"; - sha256 = "1cmmx99hs10mnr5x5kmac39kxjf9n3riphirhmijsnym8yijrcz1"; + rev = "66755a9cb9bdea62720812a1165132de6ff62468"; + sha256 = "0zca3spgnf00rxa0h5x79ydycz41b0xli7bgwpnbxannzxqswhiy"; }; }; vim-abolish = buildVimPluginFrom2Nix { - name = "vim-abolish-2018-08-02"; + name = "vim-abolish-2018-10-25"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-abolish"; - rev = "40e8b973971beb5da279a499231464ae1d959c8b"; - sha256 = "0ibhd9d57cwb2kls99wmbyl49w7v2niwqrf3pp7191pj46157720"; + rev = "56a76a8c10ca91f3e8f0a2cd9afa2be32d262e24"; + sha256 = "087l7mvb0rzcdfmrmng82s0abli6w2i4cbyiwps9k588sfcj0w7h"; }; }; @@ -1739,22 +1760,22 @@ }; vim-airline = buildVimPluginFrom2Nix { - name = "vim-airline-2018-10-03"; + name = "vim-airline-2018-11-01"; src = fetchFromGitHub { owner = "vim-airline"; repo = "vim-airline"; - rev = "f045452743736d53c7471bfb4698fd48569dc1e0"; - sha256 = "16wmigvwxxryx1jkpsfbxwmlglrv1jjmmpckgsxwg4j6v4vkgk4g"; + rev = "6516b1b4dccef543d489177431050fe8a5c5c99c"; + sha256 = "0x4vdxz31vqyd3qy8vr4gcdc649nz72axris5fxj8ln5zphlr6ll"; }; }; vim-airline-themes = buildVimPluginFrom2Nix { - name = "vim-airline-themes-2018-09-05"; + name = "vim-airline-themes-2018-10-25"; src = fetchFromGitHub { owner = "vim-airline"; repo = "vim-airline-themes"; - rev = "725789c110fbab52f8c18021f9d043839d7e31ed"; - sha256 = "15k5s8yysnvm0swfi27g2yhrnkb8kzvswb58k1jbzb65nwdw139z"; + rev = "65217b41da31f05d305b819f2a42a803dd0db434"; + sha256 = "1pv9plmbmygcnkbkdjp7gr3rp42zdh4qkmv2cfbndhdfx4yd331g"; }; }; @@ -1789,12 +1810,12 @@ }; vim-autoformat = buildVimPluginFrom2Nix { - name = "vim-autoformat-2018-09-08"; + name = "vim-autoformat-2018-10-22"; src = fetchFromGitHub { owner = "Chiel92"; repo = "vim-autoformat"; - rev = "98233b8f353fa5d237e89859a8f1b91c14c21397"; - sha256 = "18xb803vx11wx9yhxvp6aq8kh0vbidxmwhwrjfcslrw0k1zis3yl"; + rev = "db17ccbacb55beea82fdaa9a1cde82f6a928d16d"; + sha256 = "0nnykvbz5hm4cpv9jqk0jb4zzywlwgbybbirf1655rqrqfv126pp"; }; }; @@ -1899,12 +1920,12 @@ }; vim-css-color = buildVimPluginFrom2Nix { - name = "vim-css-color-2018-09-12"; + name = "vim-css-color-2018-10-20"; src = fetchFromGitHub { owner = "ap"; repo = "vim-css-color"; - rev = "7ecfc4810f34dbcd5d22a14013f977a9aa699312"; - sha256 = "1hds83biz0wv12rcqcdab1zm6lck1z4bdk67jq30x8siwcjvkwfy"; + rev = "0ee02ec9753c74d356106f0a0c4ddb0dcf9705f0"; + sha256 = "1fqngj2a4ky4z96vjryjfkblnr50jw99cfzc7xsjjpdy8j7wvrfk"; }; }; @@ -1959,12 +1980,12 @@ }; vim-dispatch = buildVimPluginFrom2Nix { - name = "vim-dispatch-2018-10-02"; + name = "vim-dispatch-2018-10-31"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-dispatch"; - rev = "ab7470d4b03bae9880bf2b5cef60fc0fb51b1101"; - sha256 = "01slb3lcbdba0a4xky6i5xflh1cjm0aq6g8yyfzrgn4w8pq50h9p"; + rev = "d4b8940fd1cd77fc6d300f003b18745a584295b2"; + sha256 = "06g0xc55z9jpa5rl8c5af5apb8b2agahsxxzayl2vn763v9p1n6b"; }; }; @@ -2109,22 +2130,22 @@ }; vim-fugitive = buildVimPluginFrom2Nix { - name = "vim-fugitive-2018-09-24"; + name = "vim-fugitive-2018-10-28"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-fugitive"; - rev = "a9100fafb8c6deb187ee1cfaa37a4a02018d6c9a"; - sha256 = "0p37gywcwbdd2sl09s2c3dhr0cvf2s53jpwyz93jls2dgnlbdri8"; + rev = "6d497b0e63173f89cfabe12ea27a7a5a8b29ac8a"; + sha256 = "1ma9zxqf0ybl6y6qd9wjp97lgrwvgzpqy5zca0c6da29gm03kb02"; }; }; vim-ghost = buildVimPluginFrom2Nix { - name = "vim-ghost-2018-10-02"; + name = "vim-ghost-2018-10-05"; src = fetchFromGitHub { owner = "raghur"; repo = "vim-ghost"; - rev = "306d83c152cd9db54bc45c5a21b92615d07bd4c7"; - sha256 = "1p6fjqlp1w7zy36isb1i3xzmjvlh2ng6iv3mb2ixllmiq4bdk26i"; + rev = "8a3acdde943688d52407b5da08988dfc528ea10c"; + sha256 = "0x7mgziyx8gs5cc37c4rm0hrzgzpg4klnkfviyj2k3h4qqj9hkaj"; }; }; @@ -2149,12 +2170,12 @@ }; vim-gitgutter = buildVimPluginFrom2Nix { - name = "vim-gitgutter-2018-08-15"; + name = "vim-gitgutter-2018-10-18"; src = fetchFromGitHub { owner = "airblade"; repo = "vim-gitgutter"; - rev = "50a7062909d91a290fae04219887b1b45f3138db"; - sha256 = "1bgpy85dxvn40ybzxih25gysy941jvylxm0fmkd5qpwkf7xm26wq"; + rev = "0597380f6b22f43a3ea6ff8364d5c239bb2504ea"; + sha256 = "18v4y616q29al2lx62gkcv5q9ka8042dk8y6i9b5jmyjfwps0q53"; }; }; @@ -2169,12 +2190,12 @@ }; vim-go = buildVimPluginFrom2Nix { - name = "vim-go-2018-10-04"; + name = "vim-go-2018-10-23"; src = fetchFromGitHub { owner = "fatih"; repo = "vim-go"; - rev = "92b360fca43553b56766aaccaf3d9166575e6061"; - sha256 = "0wq2v9damr8yp3nxxwdl1kd1vkndb456m33yjky7nrmxyshhxgnm"; + rev = "d5ce080c25806d68189be641e19996898138f1a4"; + sha256 = "09kq1zjq98vzy8gjgxiqkb7ibl3wpjz8lkzqjm110axxmx01b317"; }; }; @@ -2189,12 +2210,12 @@ }; vim-grepper = buildVimPluginFrom2Nix { - name = "vim-grepper-2018-09-10"; + name = "vim-grepper-2018-10-30"; src = fetchFromGitHub { owner = "mhinz"; repo = "vim-grepper"; - rev = "f61a745c1e19c80427a251f556f28fc31e962f6d"; - sha256 = "0l465qpphyi2c53hfwhc6fvj1s7vs2yc2l2spw387av6yqw83m9g"; + rev = "a55a14b97dc8ac848eeb95e71d095b75197ba665"; + sha256 = "08p5dp43z9bxllr5fvl3hgnyqyxlvpbfczw1ydncmzvrqqccrx08"; }; }; @@ -2259,12 +2280,12 @@ }; vim-highlightedyank = buildVimPluginFrom2Nix { - name = "vim-highlightedyank-2018-10-02"; + name = "vim-highlightedyank-2018-10-08"; src = fetchFromGitHub { owner = "machakann"; repo = "vim-highlightedyank"; - rev = "26a2ecc1ac08462680074a721c265e42b1c545ba"; - sha256 = "0ak8jws7qxjf52l3a97ks1ylf5ri7x03b90s2v4q3il4sry5h0m7"; + rev = "51e25c9fa3bd2dca500ee0c910a45641d57a57fa"; + sha256 = "1way32pgp0cb74p47g0fa5dqrz804lrypbddy65zcf3nd6rnr5qy"; }; }; @@ -2369,12 +2390,12 @@ }; vim-javacomplete2 = buildVimPluginFrom2Nix { - name = "vim-javacomplete2-2018-09-18"; + name = "vim-javacomplete2-2018-10-09"; src = fetchFromGitHub { owner = "artur-shaik"; repo = "vim-javacomplete2"; - rev = "3436162781c215f638af5ad8e83df9000edfa203"; - sha256 = "1ak1czp7dnz376bvalpnr0n8y1s0x4cpwrhb596phfa2567c4f41"; + rev = "a3af9721afcd3ce8972dd4ab0f40da947245c2fa"; + sha256 = "0pgfgf82dv0dys2d4dq48d0n4gnbmxbqpvsy3fwmqdrw9zn9bw79"; }; }; @@ -2399,12 +2420,12 @@ }; vim-jsbeautify = buildVimPluginFrom2Nix { - name = "vim-jsbeautify-2018-01-31"; + name = "vim-jsbeautify-2018-10-23"; src = fetchFromGitHub { owner = "maksimr"; repo = "vim-jsbeautify"; - rev = "7a55bffa7d87e4f1ed11650e56a1361779b39624"; - sha256 = "01jvc3nkvmhw9n7m9x96ax1ndzw78ryjmgrvkqb7gja1xb8i8jqq"; + rev = "7c586568716263e27449d9b3f2475636bcd1f4dc"; + sha256 = "1v1fcf1gm9p70l5nl9ba3xzdavx0jmz2v7x25v996dnfihaf494v"; fetchSubmodules = true; }; }; @@ -2430,12 +2451,12 @@ }; vim-jsonnet = buildVimPluginFrom2Nix { - name = "vim-jsonnet-2018-04-11"; + name = "vim-jsonnet-2018-10-08"; src = fetchFromGitHub { owner = "google"; repo = "vim-jsonnet"; - rev = "1425166887329363381194adc457b02b663b1354"; - sha256 = "0kkpvp1r06l3glhgw4wv3ihqisjhs5m0x7mxgy388hy4r73fx08j"; + rev = "824dcfe76568dba38135332fc4729e2b2c4d9b3a"; + sha256 = "1i79fc7yww5cpv9ck36smxq2yidj323kliyy5hw4fvsx7b4ahwsg"; }; }; @@ -2470,12 +2491,12 @@ }; vim-leader-guide = buildVimPluginFrom2Nix { - name = "vim-leader-guide-2017-03-18"; + name = "vim-leader-guide-2018-10-06"; src = fetchFromGitHub { owner = "hecal3"; repo = "vim-leader-guide"; - rev = "6ac8c663e65c9c0ded70417b84f66ee59457893e"; - sha256 = "1hqha3ig40ls15bnb10xpbl91swn0gxqnhmz5frkvvdzj4wq55fw"; + rev = "8dff63fcc29811bb30fccb135f31ad488a9a6170"; + sha256 = "1n1qgvr729r28rprjkam0blh4qscs8bxf6ay7v8x732axg9gpyav"; }; }; @@ -2490,12 +2511,12 @@ }; vim-localvimrc = buildVimPluginFrom2Nix { - name = "vim-localvimrc-2018-09-24"; + name = "vim-localvimrc-2018-10-29"; src = fetchFromGitHub { owner = "embear"; repo = "vim-localvimrc"; - rev = "e0ce126a2a8baf3816ae722b604121951a73e092"; - sha256 = "0wi5gyafzdfwin6bxk369fz59gbw5w4xm4pgq2jpz5hxk7krwkll"; + rev = "109962b3b7359ee2978417264b168ac6842db9cf"; + sha256 = "13jpp5g91bynl91n8i8q8ldicii3ns42fq3hlnjcrhz5ml734wlf"; }; }; @@ -2520,12 +2541,12 @@ }; vim-markdown = buildVimPluginFrom2Nix { - name = "vim-markdown-2018-07-30"; + name = "vim-markdown-2018-10-24"; src = fetchFromGitHub { owner = "plasticboy"; repo = "vim-markdown"; - rev = "f19506b1bfe5e60c39581dd53f6913a09385f5dd"; - sha256 = "0x0lsynmwg41fq8zf7149a2anj2b7fnm0d7b0vqnj3dwdwrjj5a1"; + rev = "52ee2eb68a706972a1840ca036035033046568d6"; + sha256 = "1w186rbnhk1y6sqqrwvgfs4xigf2c1f1xhjlhvmmb174cp5c84v2"; }; }; @@ -2550,12 +2571,12 @@ }; vim-multiple-cursors = buildVimPluginFrom2Nix { - name = "vim-multiple-cursors-2018-08-10"; + name = "vim-multiple-cursors-2018-10-16"; src = fetchFromGitHub { owner = "terryma"; repo = "vim-multiple-cursors"; - rev = "dd9289af03abafa76b28c503e20747ff7d7d89e5"; - sha256 = "082y4xsvsq2psllds7bncshzjsvh48l4200mri9vkv3f5mydz985"; + rev = "f4fd6ad4e4075dd14d208af059063f1f3cfb7d55"; + sha256 = "17fgwvs8qyyl1yywbmhb7wsv0i0nzl40bgaqik7w72zgndvai7ig"; }; }; @@ -2620,12 +2641,12 @@ }; vim-operator-surround = buildVimPluginFrom2Nix { - name = "vim-operator-surround-2017-12-22"; + name = "vim-operator-surround-2018-11-01"; src = fetchFromGitHub { owner = "rhysd"; repo = "vim-operator-surround"; - rev = "001c0da077b5b38a723151b19760d220e02363db"; - sha256 = "0c6w6id57faw6sjf5wvw9qp2a4i7xj65q0c4hjs0spgzycv2wpkh"; + rev = "80337a40a829cfc77b065a71d8a609e2ad7d2c8b"; + sha256 = "0f9shg81bl39hz67ahbi6k6gbhky7gzp8by16fhiz75hbjgp9lq2"; }; }; @@ -2660,12 +2681,12 @@ }; vim-pandoc = buildVimPluginFrom2Nix { - name = "vim-pandoc-2018-08-13"; + name = "vim-pandoc-2018-10-07"; src = fetchFromGitHub { owner = "vim-pandoc"; repo = "vim-pandoc"; - rev = "d0911146c68512defcf9d947542b06d7f7eed37e"; - sha256 = "13qqwpmnzida7bm57r306w3fpb397h6b2gxclq9in0ccq5h92xid"; + rev = "6be5e23d8ab5df9be20e324fffdc2f978cac2077"; + sha256 = "07f91w4z49xgrachra78hnfs9jl2hqx15amhcr4phnpb9f3hmjbg"; }; }; @@ -2740,12 +2761,12 @@ }; vim-polyglot = buildVimPluginFrom2Nix { - name = "vim-polyglot-2018-07-08"; + name = "vim-polyglot-2018-10-10"; src = fetchFromGitHub { owner = "sheerun"; repo = "vim-polyglot"; - rev = "055f7710b65dfa2df52fc0b5be2486ae36ac5751"; - sha256 = "1yyqsy3q1kjvlqffc10zn3kl0k468xj8mycc22xp1hp1zrkxcf5x"; + rev = "ec1c94306953b678bb36572897bd218fe6c76506"; + sha256 = "1n3s52ncmdbhygrdycrnqk9sj42413q0ah1q8a7s6q4z6zdm4scz"; }; }; @@ -2760,12 +2781,12 @@ }; vim-projectionist = buildVimPluginFrom2Nix { - name = "vim-projectionist-2018-09-18"; + name = "vim-projectionist-2018-10-21"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-projectionist"; - rev = "2f7ccf211326e06b89b5a677b2eee3ddb4b644a2"; - sha256 = "13v9j32p16ak237gwvhk69s6q6maxpg41xd66dqvkj0d7hb21i0v"; + rev = "ea1347bc475bb58a3c6aa8da37e5a4a019efbf17"; + sha256 = "1sw4vnb0w78vjaxgx3w4gx6j8jdcb1146fnf7wv497wa2grmi9n9"; }; }; @@ -2790,12 +2811,12 @@ }; vim-quickrun = buildVimPluginFrom2Nix { - name = "vim-quickrun-2018-09-06"; + name = "vim-quickrun-2018-10-16"; src = fetchFromGitHub { owner = "thinca"; repo = "vim-quickrun"; - rev = "0a78a3fe79b3607e01543cd33d8f2d8aceb35909"; - sha256 = "1alpirkl6gi840ja21wn62gfmcyri6669p8r2c0qyjsajwx8gm8y"; + rev = "9dbda9dcdc8ef3150c414b9b1ea347b04b942665"; + sha256 = "06ssvyk84097vqzyrnrmxsr63diy8mjy8mv8xkhq5cmvqhavz91s"; }; }; @@ -2820,12 +2841,12 @@ }; vim-rhubarb = buildVimPluginFrom2Nix { - name = "vim-rhubarb-2018-09-20"; + name = "vim-rhubarb-2018-10-31"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-rhubarb"; - rev = "3a9ddb8ffa46b9fa49f3d9372bbb5d64bdc5fd23"; - sha256 = "1swybc30vyf309w1a34jf94xja1kikvrr3xpixfban50s6aiyips"; + rev = "42072cc349c46db79c0a4411d399a2fe31cfda7e"; + sha256 = "020fshfrwbycs4saci58k625330i2ndfh6lqnxz5h0pp2m5y6jp8"; }; }; @@ -2880,12 +2901,12 @@ }; vim-sensible = buildVimPluginFrom2Nix { - name = "vim-sensible-2018-09-17"; + name = "vim-sensible-2018-10-27"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-sensible"; - rev = "679e53d61558466933fbffc87fab8735eeb8fea8"; - sha256 = "1sq836sy6kn9z092mnwjxs9p3ijka82gm0nhfvlym348yv1s03wn"; + rev = "7f46e82fc7e343be84df6c06bec63dd6494b6712"; + sha256 = "1xizcrxn34fbpdcbs0ydc1s9kma9cmk1llz0xbmrdgdf2yaz2558"; }; }; @@ -2900,12 +2921,12 @@ }; vim-signify = buildVimPluginFrom2Nix { - name = "vim-signify-2018-10-01"; + name = "vim-signify-2018-10-31"; src = fetchFromGitHub { owner = "mhinz"; repo = "vim-signify"; - rev = "ce2dd937bf3a394ef2fbeda8ab56d2b4437be3c3"; - sha256 = "08ah81bn0cmqphi2lw2y7pjdg8sw2wjwc3p3j6pj0gyqx2bsf408"; + rev = "4e7faba8d32d56d80090dedc5328849a7128b73a"; + sha256 = "0wm1kgklvd4b52lrqb9l7n511p8kaw8y9707962l4nrp8cbrbs31"; }; }; @@ -2940,12 +2961,12 @@ }; vim-snippets = buildVimPluginFrom2Nix { - name = "vim-snippets-2018-09-25"; + name = "vim-snippets-2018-10-27"; src = fetchFromGitHub { owner = "honza"; repo = "vim-snippets"; - rev = "b51c01137259ac7cd59381001279fa36baefbc5f"; - sha256 = "00ydadqq5nj94ldcd9ld45hkx6micd3mfllvn5csxbg4vw0p5472"; + rev = "06161e65cd238d5f462f21e3f549c61860db85d1"; + sha256 = "10n94s90jjwsg58cm5lrcs553mwsdyvy34rmf6xsa2mq9ql21vy1"; }; }; @@ -2970,22 +2991,22 @@ }; vim-speeddating = buildVimPluginFrom2Nix { - name = "vim-speeddating-2017-05-24"; + name = "vim-speeddating-2018-10-31"; src = fetchFromGitHub { owner = "tpope"; repo = "vim-speeddating"; - rev = "a418667791f03694065948342f2d6c5cca8d0f32"; - sha256 = "1wm33izawazh0dy70zjk6rkg30yrlldba5r1gypnr4barps702gw"; + rev = "799cd3473bc64adcb6b556bf349f549570666b62"; + sha256 = "0vyla4lslf1hycx1mvgydhlar2f6bwnwbcp39s1f0m65fqs25rhz"; }; }; vim-startify = buildVimPluginFrom2Nix { - name = "vim-startify-2018-10-02"; + name = "vim-startify-2018-10-31"; src = fetchFromGitHub { owner = "mhinz"; repo = "vim-startify"; - rev = "556bf1d507dfaddfba4b5795716ea20f8ba902ac"; - sha256 = "1jjj7iij08455rlc705m3pnbjg87r2l29jclzkiy7nsvjjh3dfwx"; + rev = "356562270684d8d1647daf0faaf76ac90740990c"; + sha256 = "0qc9ifq4blixda0kyc0zhmqi6cqz44xnk9x17p0p9qqidf1s1l1r"; }; }; @@ -3030,12 +3051,12 @@ }; vim-table-mode = buildVimPluginFrom2Nix { - name = "vim-table-mode-2018-05-16"; + name = "vim-table-mode-2018-10-21"; src = fetchFromGitHub { owner = "dhruvasagar"; repo = "vim-table-mode"; - rev = "5483e163bd0a67e729e0e8436315f33f9e126baf"; - sha256 = "0mmpa7zhrj8mqf4931ldf6n9jlpfxc4kg8xdhqlp7srlnq4h8siw"; + rev = "130e835ff73ae16c5827fe37f1d1b09456c5f7dc"; + sha256 = "1dlyszky76z8kj6vy4sfn5zkjdi12hwfn29g8adds04zbaxi61gg"; }; }; @@ -3060,12 +3081,12 @@ }; vim-test = buildVimPluginFrom2Nix { - name = "vim-test-2018-09-23"; + name = "vim-test-2018-10-24"; src = fetchFromGitHub { owner = "janko-m"; repo = "vim-test"; - rev = "5aa77d57d22d453bd53f28a18f80e7bfecccf811"; - sha256 = "1w0x4xfj3fl5zwnk14sh9sp1hkj25grrw1wan0g3y7ar8ygjyl7f"; + rev = "cecb28e55a29ecde7cea926852998c47027bd759"; + sha256 = "1av9fmva2ki180wikfik3yl83hzirj43rwhwwms65bk590cf4h95"; }; }; @@ -3090,12 +3111,12 @@ }; vim-tmux-navigator = buildVimPluginFrom2Nix { - name = "vim-tmux-navigator-2018-07-13"; + name = "vim-tmux-navigator-2018-10-19"; src = fetchFromGitHub { owner = "christoomey"; repo = "vim-tmux-navigator"; - rev = "18b775fbccde5ff02e516c014290650bb40e257d"; - sha256 = "09v8amrdk8h4hsr9va8v9wdgzvj89z04y4j71l94rd7r6smxinbj"; + rev = "7eb75a10e3ab0504673a0e7eb32af6e5521b80ec"; + sha256 = "0kafk2b8zxwx354p8inww0cyrw9w4arbiixbvvhrhxks7cccfxx6"; }; }; @@ -3160,22 +3181,22 @@ }; vim-vue = buildVimPluginFrom2Nix { - name = "vim-vue-2018-09-01"; + name = "vim-vue-2018-10-08"; src = fetchFromGitHub { owner = "posva"; repo = "vim-vue"; - rev = "2df46524311e719af51394726f5f88fc2aa08bd2"; - sha256 = "0bsg8j4871jvmsyi5mmpyhkmjxajf5ss3dx9072wdc21cx8pn185"; + rev = "720ca48e0207f2aca331b9d949ce9d4ff5702737"; + sha256 = "1cqny4vppyaw29g6bx1qlfdjb5fa0avpy41jkidazv76ym4ahi2x"; }; }; vim-wakatime = buildVimPluginFrom2Nix { - name = "vim-wakatime-2018-10-03"; + name = "vim-wakatime-2018-10-27"; src = fetchFromGitHub { owner = "wakatime"; repo = "vim-wakatime"; - rev = "3fe47846572032fc83d8300c596de6ded4f456a2"; - sha256 = "0qgy2chdisym34892kzs3gbvq7bj64mxs4q4475hhwpr46p7lyrn"; + rev = "656853504feb4aab3168e007aab5a1aee355bff5"; + sha256 = "1dpi6dc1gdwq4smsis9nxd2p3cq9jm88yj3kn12gfrsb5w1j9k7q"; }; }; @@ -3220,12 +3241,12 @@ }; vim-yapf = buildVimPluginFrom2Nix { - name = "vim-yapf-2018-06-05"; + name = "vim-yapf-2018-10-04"; src = fetchFromGitHub { owner = "mindriot101"; repo = "vim-yapf"; - rev = "cae79733a1a39732c5305d4a89cd093d17cb917d"; - sha256 = "16bmzvzks6kbqm6dk908k23b9wj7qf3x8bz3kikrzj27s0p7s9cc"; + rev = "b0c31bd73a6d1026765e659bd0a62c625ec057ad"; + sha256 = "0ncv6kjyywljsq5fz71rkmgmqxm7msyscgndnj055bnx5sh9wk80"; }; }; @@ -3260,12 +3281,12 @@ }; vimproc-vim = buildVimPluginFrom2Nix { - name = "vimproc-vim-2018-01-07"; + name = "vimproc-vim-2018-10-11"; src = fetchFromGitHub { owner = "Shougo"; repo = "vimproc.vim"; - rev = "2300224d366642f4f8d6f88861535d4ccbe20143"; - sha256 = "0b8ljqnix8bs667bpymg3s0g5f49fnphgddl6196dj6jvdfn1xia"; + rev = "9136f03680db82c552f4a84e3b461f83c6e232d5"; + sha256 = "0d930qgz049k55xgrgsihqqg1dw22zf3j1vbzyb9c65ys60x2q69"; }; }; @@ -3280,22 +3301,22 @@ }; vimtex = buildVimPluginFrom2Nix { - name = "vimtex-2018-10-03"; + name = "vimtex-2018-11-01"; src = fetchFromGitHub { owner = "lervag"; repo = "vimtex"; - rev = "10f3304f39ec1b49e77bb351d0972db179cce1b3"; - sha256 = "1yqajhr5q12yfjn9nvw4d8s89pcgkgv5hi1gd9wj7wjxk85wa6xm"; + rev = "2aae07e67034f4806d45500a967bf5775ab22baf"; + sha256 = "1ng1ps5f2vh7xs5lfkid7zwvcjglynw53xvd301zpjbgln2gv3fz"; }; }; vimwiki = buildVimPluginFrom2Nix { - name = "vimwiki-2018-09-17"; + name = "vimwiki-2018-10-12"; src = fetchFromGitHub { owner = "vimwiki"; repo = "vimwiki"; - rev = "f882cf01528e471d78d10df28ce407bc1cc23bc9"; - sha256 = "1c6vkz3y168akh0c6a8api4g0nwsh90gkd6l0pyqpr03glwyqg61"; + rev = "7ffc295094debc3d521cecf267d736cc8562c20e"; + sha256 = "0gl2d7xqzisinsgxpcwkkpryva8pklca9x860bqsirajr8mcdbpc"; }; }; @@ -3380,12 +3401,12 @@ }; youcompleteme = buildVimPluginFrom2Nix { - name = "youcompleteme-2018-09-20"; + name = "youcompleteme-2018-10-14"; src = fetchFromGitHub { owner = "valloric"; repo = "youcompleteme"; - rev = "e37923a752c7eee184cd6d96ac34e303fb7cfae9"; - sha256 = "1dhh88f1mz7rajxyjbarqf3qiia6n34salknri3a0dffbih5y8rc"; + rev = "f67e5ff27b048d8c55a10ba6a27c6c5b16d0f6ba"; + sha256 = "14v7kqv4d2013imc5qkh22lwl5d9x419jjfj5qinld04n56banmv"; fetchSubmodules = true; }; }; diff --git a/pkgs/misc/vim-plugins/overrides.nix b/pkgs/misc/vim-plugins/overrides.nix index 6b8bf42c795f..64fb9ef9693c 100644 --- a/pkgs/misc/vim-plugins/overrides.nix +++ b/pkgs/misc/vim-plugins/overrides.nix @@ -9,6 +9,12 @@ , languagetool , Cocoa, CoreFoundation, CoreServices , buildVimPluginFrom2Nix + +# vim-go denpencies +, asmfmt, delve, errcheck, godef, golint +, gomodifytags, gotags, gotools, motion +, gnused, reftools, gogetdoc, gometalinter +, impl, iferr, gocode, gocode-gomod, go-tools }: let @@ -247,6 +253,37 @@ with generated; dependencies = ["vim-misc"]; }); + # change the go_bin_path to point to a path in the nix store. See the code in + # fatih/vim-go here + # https://github.com/fatih/vim-go/blob/155836d47052ea9c9bac81ba3e937f6f22c8e384/autoload/go/path.vim#L154-L159 + vim-go = vim-go.overrideAttrs(old: let + binPath = lib.makeBinPath [ + asmfmt + delve + errcheck + go-tools + gocode + gocode-gomod + godef + gogetdoc + golint + gometalinter + gomodifytags + gotags + gotools + iferr + impl + motion + reftools + ]; + in { + postPatch = '' + ${gnused}/bin/sed \ + -Ee 's@"go_bin_path", ""@"go_bin_path", "${binPath}"@g' \ + -i autoload/go/config.vim + ''; + }); + vim-grammarous = vim-grammarous.overrideAttrs(old: { # use `:GrammarousCheck` to initialize checking # In neovim, you also want to use set @@ -334,4 +371,13 @@ with generated; }; }); + jedi-vim = jedi-vim.overrideAttrs(old: { + # checking for python3 support in vim would be neat, too, but nobody else seems to care + buildInputs = [ python3Packages.jedi ]; + meta = { + description = "code-completion for python using python-jedi"; + license = stdenv.lib.licenses.mit; + }; + }); + } diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names index a503f0bedadc..33049c834a26 100644 --- a/pkgs/misc/vim-plugins/vim-plugin-names +++ b/pkgs/misc/vim-plugins/vim-plugin-names @@ -32,18 +32,20 @@ chrisgeo/sparkup chriskempson/base16-vim christoomey/vim-sort-motion christoomey/vim-tmux-navigator +cocopon/iceberg.vim ctjhoa/spacevim ctrlpvim/ctrlp.vim dag/vim2hs dannyob/quickfixstatus +davidhalter/jedi-vim derekelkins/agda-vim derekwyatt/vim-scala dhruvasagar/vim-table-mode digitaltoad/vim-jade dleonard0/pony-vim-syntax dracula/vim -dylanaraps/wal.vim drmingdrmer/xptemplate +dylanaraps/wal.vim eagletmt/ghcmod-vim eagletmt/neco-ghc easymotion/vim-easymotion diff --git a/pkgs/misc/vscode-extensions/cpptools/default.nix b/pkgs/misc/vscode-extensions/cpptools/default.nix index e3463246ab2c..539d03d66fe1 100644 --- a/pkgs/misc/vscode-extensions/cpptools/default.nix +++ b/pkgs/misc/vscode-extensions/cpptools/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchzip, vscode-utils, jq, mono46, clang-tools, writeScript +{ stdenv, fetchzip, vscode-utils, jq, mono, clang-tools, writeScript , gdbUseFixed ? true, gdb # The gdb default setting will be fixed to specified. Use version from `PATH` otherwise. }: @@ -34,8 +34,8 @@ let name = "cpptools-language-component-binaries"; src = fetchzip { - url = https://download.visualstudio.microsoft.com/download/pr/11991016/8a81aa8f89aac452956b0e4c68e6620b/Bin_Linux.zip; - sha256 = "0ma59fxfldbgh6ijlvfbs3hnl4g0cnw5gs6286zdrp065n763sv4"; + url = "https://download.visualstudio.microsoft.com/download/pr/e8bc2ccc-bb10-4d40-8e29-edcd78986e9a/2e86fa29aefdbde2ea2cd1a6fceadeaa/bin_linux.zip"; + sha256 = "1hvrbp3c4733aryslgyh3l5azmqkw398j2wbgr3w788fphg4v6cc"; }; patchPhase = '' @@ -59,7 +59,7 @@ let export PATH=''${PATH}''${PATH:+:}${gdb}/bin '' else ""} - ${mono46}/bin/mono $BIN_DIR/bin/OpenDebugAD7.exe $* + ${mono}/bin/mono $BIN_DIR/bin/OpenDebugAD7.exe $* ''; in @@ -81,7 +81,7 @@ vscode-utils.buildVscodeMarketplaceExtension { # 1. Add activation events so that the extension is functional. This listing is empty when unpacking the extension but is filled at runtime. # 2. Patch `packages.json` so that nix's *gdb* is used as default value for `miDebuggerPath`. cat ./package_ori.json | \ - jq --slurpfile actEvts ${./package-activation-events-0-16-1.json} '(.activationEvents) = $actEvts[0]' | \ + jq --slurpfile actEvts ${./package-activation-events.json} '(.activationEvents) = $actEvts[0]' | \ jq '(.contributes.debuggers[].configurationAttributes | .attach , .launch | .properties.miDebuggerPath | select(. != null) | select(.default == "/usr/bin/gdb") | .default) = "${gdbDefaultsTo}"' > \ ./package.json diff --git a/pkgs/misc/vscode-extensions/cpptools/package-activation-events-0-16-1.json b/pkgs/misc/vscode-extensions/cpptools/package-activation-events-0-16-1.json deleted file mode 100644 index 3a12a8bc0474..000000000000 --- a/pkgs/misc/vscode-extensions/cpptools/package-activation-events-0-16-1.json +++ /dev/null @@ -1,22 +0,0 @@ -[ -"onLanguage:cpp", -"onLanguage:c", -"onCommand:extension.pickNativeProcess", -"onCommand:extension.pickRemoteNativeProcess", -"onCommand:C_Cpp.ConfigurationEdit", -"onCommand:C_Cpp.ConfigurationSelect", -"onCommand:C_Cpp.SwitchHeaderSource", -"onCommand:C_Cpp.Navigate", -"onCommand:C_Cpp.GoToDeclaration", -"onCommand:C_Cpp.PeekDeclaration", -"onCommand:C_Cpp.ToggleErrorSquiggles", -"onCommand:C_Cpp.ToggleIncludeFallback", -"onCommand:C_Cpp.ToggleDimInactiveRegions", -"onCommand:C_Cpp.ShowReleaseNotes", -"onCommand:C_Cpp.ResetDatabase", -"onCommand:C_Cpp.PauseParsing", -"onCommand:C_Cpp.ResumeParsing", -"onCommand:C_Cpp.ShowParsingCommands", -"onCommand:C_Cpp.TakeSurvey", -"onDebug" -] \ No newline at end of file diff --git a/pkgs/misc/vscode-extensions/cpptools/package-activation-events.json b/pkgs/misc/vscode-extensions/cpptools/package-activation-events.json new file mode 100644 index 000000000000..c2d8a10f340a --- /dev/null +++ b/pkgs/misc/vscode-extensions/cpptools/package-activation-events.json @@ -0,0 +1,25 @@ +[ + "onLanguage:cpp", + "onLanguage:c", + "onCommand:extension.pickNativeProcess", + "onCommand:extension.pickRemoteNativeProcess", + "onCommand:C_Cpp.ConfigurationEdit", + "onCommand:C_Cpp.ConfigurationSelect", + "onCommand:C_Cpp.ConfigurationProviderSelect", + "onCommand:C_Cpp.SwitchHeaderSource", + "onCommand:C_Cpp.Navigate", + "onCommand:C_Cpp.GoToDeclaration", + "onCommand:C_Cpp.PeekDeclaration", + "onCommand:C_Cpp.ToggleErrorSquiggles", + "onCommand:C_Cpp.ToggleIncludeFallback", + "onCommand:C_Cpp.ToggleDimInactiveRegions", + "onCommand:C_Cpp.ToggleSnippets", + "onCommand:C_Cpp.ShowReleaseNotes", + "onCommand:C_Cpp.ResetDatabase", + "onCommand:C_Cpp.PauseParsing", + "onCommand:C_Cpp.ResumeParsing", + "onCommand:C_Cpp.ShowParsingCommands", + "onCommand:C_Cpp.TakeSurvey", + "onDebug", + "workspaceContains:/.vscode/c_cpp_properties.json" +] diff --git a/pkgs/os-specific/darwin/apple-sdk/frameworks.nix b/pkgs/os-specific/darwin/apple-sdk/frameworks.nix index 9e47b8d02fdf..aab2852c1689 100644 --- a/pkgs/os-specific/darwin/apple-sdk/frameworks.nix +++ b/pkgs/os-specific/darwin/apple-sdk/frameworks.nix @@ -34,7 +34,7 @@ with frameworks; with libs; { CoreMIDIServer = []; CoreMedia = [ ApplicationServices AudioToolbox CoreAudio CF CoreGraphics CoreVideo ]; CoreMediaIO = [ CF CoreMedia ]; - CoreText = [ CF CoreGraphics cf-private ]; + CoreText = [ CF CoreGraphics ]; CoreVideo = [ ApplicationServices CF CoreGraphics IOSurface OpenGL ]; CoreWLAN = [ SecurityFoundation ]; DVComponentGlue = [ CoreServices QuickTime ]; @@ -48,8 +48,7 @@ with frameworks; with libs; { ExceptionHandling = []; FWAUserLib = []; ForceFeedback = [ CF IOKit ]; - # cf-private was moved first in list because of https://github.com/NixOS/nixpkgs/pull/28635 - Foundation = [ cf-private CF libobjc Security ApplicationServices SystemConfiguration ]; + Foundation = [ CF libobjc Security ApplicationServices SystemConfiguration ]; GLKit = [ CF ]; GLUT = [ OpenGL ]; GSS = []; diff --git a/pkgs/os-specific/linux/ati-drivers/default.nix b/pkgs/os-specific/linux/ati-drivers/default.nix index d5d42faa913e..cda7e03cd066 100644 --- a/pkgs/os-specific/linux/ati-drivers/default.nix +++ b/pkgs/os-specific/linux/ati-drivers/default.nix @@ -61,8 +61,8 @@ stdenv.mkDerivation rec { src = fetchurl { url = "https://www2.ati.com/drivers/linux/radeon-crimson-15.12-15.302-151217a-297685e.zip"; - sha256 = "0n0ynqmjkjp5dl5q07as7ps3rlyyn63hq4mlwgd7c7v82ky2skvh"; - curlOpts = "--referer http://support.amd.com/en-us/download/desktop?os=Linux+x86_64"; + sha256 = "704f2dfc14681f76dae3b4120c87b1ded33cf43d5a1d800b6de5ca292bb61e58"; + curlOpts = "--referer https://www.amd.com/en/support"; }; hardeningDisable = [ "pic" "format" ]; diff --git a/pkgs/os-specific/linux/bpftrace/bcc-source.patch b/pkgs/os-specific/linux/bpftrace/bcc-source.patch new file mode 100644 index 000000000000..a4c9947f0c34 --- /dev/null +++ b/pkgs/os-specific/linux/bpftrace/bcc-source.patch @@ -0,0 +1,32 @@ +From fc0a5bd2ddb5827c5288ee284c1f2d834d79e432 Mon Sep 17 00:00:00 2001 +From: Rodney Lorrimar <dev@rodney.id.au> +Date: Tue, 16 Oct 2018 09:55:59 +1000 +Subject: [PATCH 1/3] Don't use ExternalProject for bcc sources + +--- + CMakeLists.txt | 9 +++++++++ + 1 file changed, 9 insertions(+) + +diff --git a/CMakeLists.txt b/CMakeLists.txt +index eae850a..b20fb33 100644 +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -31,6 +31,15 @@ if (OFFLINE_BUILDS) + UPDATE_DISCONNECTED 1 + BUILD_COMMAND ${CMAKE_COMMAND} --build . --target bcc-static + ) ++elseif (NIX_BUILDS) ++ include(ExternalProject) ++ ExternalProject_Add(bcc ++ DOWNLOAD_COMMAND rmdir bcc && ln -sf $ENV{bccSrc} bcc ++ STEP_TARGETS build update ++ EXCLUDE_FROM_ALL 1 ++ UPDATE_DISCONNECTED 1 ++ BUILD_COMMAND ${CMAKE_COMMAND} --build . --target bcc-static ++ ) + else() + include(ExternalProject) + ExternalProject_Add(bcc +-- +2.17.1 + diff --git a/pkgs/os-specific/linux/bpftrace/default.nix b/pkgs/os-specific/linux/bpftrace/default.nix new file mode 100644 index 000000000000..12773a957165 --- /dev/null +++ b/pkgs/os-specific/linux/bpftrace/default.nix @@ -0,0 +1,57 @@ +{ stdenv, fetchFromGitHub +, cmake, pkgconfig, flex, bison +, llvmPackages, kernel, linuxHeaders, elfutils, libelf, bcc +}: + +stdenv.mkDerivation rec { + name = "bpftrace-unstable-${version}"; + version = "2018-10-27"; + + src = fetchFromGitHub { + owner = "iovisor"; + repo = "bpftrace"; + rev = "c07b54f61fd7b7b49e0a254e746d6f442c5d780d"; + sha256 = "1mpcjfyay9akmpqxag2ndwpz1qsdx8ii07jh9fky4w40wi9cipyg"; + }; + + # bpftrace requires an unreleased version of bcc, added to the cmake + # build as an ExternalProject. + # https://github.com/iovisor/bpftrace/issues/184 + bccSrc = fetchFromGitHub { + owner = "iovisor"; + repo = "bcc"; + rev = "afd00154865f3b2da6781cf92cecebaca4853950"; + sha256 = "0ad78smrnipr1f377i5rv6ksns7v2vq54g5badbj5ldqs4x0hygd"; + }; + + buildInputs = [ + llvmPackages.llvm llvmPackages.clang-unwrapped kernel + elfutils libelf bccSrc + ]; + + nativeBuildInputs = [ cmake pkgconfig flex bison ] + # libelf is incompatible with elfutils-libelf + ++ stdenv.lib.filter (x: x != libelf) kernel.moduleBuildDependencies; + + patches = [ + ./bcc-source.patch + # https://github.com/iovisor/bpftrace/issues/184 + ./disable-gtests.patch + ]; + + configurePhase = '' + mkdir build + cd build + cmake ../ \ + -DKERNEL_HEADERS_DIR=${linuxHeaders} \ + -DNIX_BUILDS:BOOL=ON \ + -DCMAKE_INSTALL_PREFIX=$out + ''; + + meta = with stdenv.lib; { + description = "High-level tracing language for Linux eBPF"; + homepage = https://github.com/iovisor/bpftrace; + license = licenses.asl20; + maintainers = with maintainers; [ rvl ]; + }; +} diff --git a/pkgs/os-specific/linux/bpftrace/disable-gtests.patch b/pkgs/os-specific/linux/bpftrace/disable-gtests.patch new file mode 100644 index 000000000000..941d85a41126 --- /dev/null +++ b/pkgs/os-specific/linux/bpftrace/disable-gtests.patch @@ -0,0 +1,73 @@ +From 221eea24674fffb3b657b2bd0c923071b69d48a7 Mon Sep 17 00:00:00 2001 +From: Rodney Lorrimar <dev@rodney.id.au> +Date: Tue, 16 Oct 2018 09:56:47 +1000 +Subject: [PATCH 2/3] Disable tests + +Would prefer to use gtest library in the normal way rather through +ExternalProject. +--- + CMakeLists.txt | 4 ++-- + tests/CMakeLists.txt | 18 +++++++++++------- + 2 files changed, 13 insertions(+), 9 deletions(-) + +diff --git a/CMakeLists.txt b/CMakeLists.txt +index b20fb33..7025d17 100644 +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -20,7 +20,7 @@ add_compile_options("-Wno-format-security") + #add_compile_options("-Wstrict-overflow=5") + #add_compile_options("-Wdisabled-optimization") + +-enable_testing() ++# enable_testing() + + if (OFFLINE_BUILDS) + include(ExternalProject) +@@ -79,7 +79,7 @@ include_directories(${CLANG_INCLUDE_DIRS}) + add_subdirectory(src/arch) + add_subdirectory(src/ast) + add_subdirectory(src) +-add_subdirectory(tests) ++# add_subdirectory(tests) + add_subdirectory(resources) + add_subdirectory(tools) + add_subdirectory(man) +diff --git a/tests/CMakeLists.txt b/tests/CMakeLists.txt +index c283efa..6b5bff0 100644 +--- a/tests/CMakeLists.txt ++++ b/tests/CMakeLists.txt +@@ -45,6 +45,8 @@ if (OFFLINE_BUILDS) + EXCLUDE_FROM_ALL 1 + UPDATE_DISCONNECTED 1 + ) ++elseif (NIX_BUILDS) ++ + else() + include(ExternalProject) + ExternalProject_Add(gtest-git +@@ -54,13 +56,15 @@ else() + EXCLUDE_FROM_ALL 1 + ) + endif() +-add_dependencies(bpftrace_test gtest-git-build) +-ExternalProject_Get_Property(gtest-git source_dir binary_dir) +-target_include_directories(bpftrace_test PUBLIC ${source_dir}/googletest/include) +-target_include_directories(bpftrace_test PUBLIC ${source_dir}/googlemock/include) +-target_link_libraries(bpftrace_test ${binary_dir}/googlemock/gtest/libgtest.a) +-target_link_libraries(bpftrace_test ${binary_dir}/googlemock/gtest/libgtest_main.a) +-target_link_libraries(bpftrace_test ${binary_dir}/googlemock/libgmock.a) ++ ++find_library(LIBGTEST "gtest") ++if(LIBGTEST) ++ set(LIBRARY_DEPENDENCIES ++ ${LIBRARY_DEPENDENCIES} ++ ${LIBGTEST} ++ ) ++endif() ++ + target_link_libraries(bpftrace_test ${CMAKE_THREAD_LIBS_INIT}) + + add_test(NAME bpftrace_test COMMAND bpftrace_test) +-- +2.17.1 + diff --git a/pkgs/os-specific/linux/busybox/sandbox-shell.nix b/pkgs/os-specific/linux/busybox/sandbox-shell.nix index de8865ba3acc..c2d82ebc487a 100644 --- a/pkgs/os-specific/linux/busybox/sandbox-shell.nix +++ b/pkgs/os-specific/linux/busybox/sandbox-shell.nix @@ -3,7 +3,7 @@ # Minimal shell for use as basic /bin/sh in sandbox builds busybox.override { # musl roadmap has RISC-V support projected for 1.1.20 - useMusl = !stdenv.hostPlatform.isRiscV; + useMusl = !stdenv.hostPlatform.isRiscV && stdenv.hostPlatform.libc != "bionic"; enableStatic = true; enableMinimal = true; extraConfig = '' diff --git a/pkgs/os-specific/linux/dropwatch/default.nix b/pkgs/os-specific/linux/dropwatch/default.nix new file mode 100644 index 000000000000..936dbf719a87 --- /dev/null +++ b/pkgs/os-specific/linux/dropwatch/default.nix @@ -0,0 +1,35 @@ +{ stdenv, fetchFromGitHub, autoreconfHook, pkgconfig +, libnl, readline, libbfd, ncurses, zlib }: + +stdenv.mkDerivation rec { + pname = "dropwatch"; + version = "1.5"; + name = "${pname}-${version}"; + + src = fetchFromGitHub { + owner = "nhorman"; + repo = pname; + rev = version; + sha256 = "085hyyl28v0vpxfnmzchl97fjfnzj46ynhkg6y4i6h194y0d99m7"; + }; + + nativeBuildInputs = [ autoreconfHook pkgconfig ]; + + buildInputs = [ libbfd libnl ncurses readline zlib ]; + + # To avoid running into https://sourceware.org/bugzilla/show_bug.cgi?id=14243 we need to define: + NIX_CFLAGS_COMPILE = [ + "-DPACKAGE=${pname}" + "-DPACKAGE_VERSION=${version}" + ]; + + enableParallelBuilding = true; + + meta = with stdenv.lib; { + description = "Kernel dropped packet monitor"; + homepage = https://github.com/nhorman/dropwatch; + license = licenses.gpl2; + platforms = platforms.linux; + maintainers = [ maintainers.c0bw3b ]; + }; +} diff --git a/pkgs/os-specific/linux/firmware/raspberrypi-wireless/default.nix b/pkgs/os-specific/linux/firmware/raspberrypi-wireless/default.nix index eb5b0bd294c8..89b4f70264eb 100644 --- a/pkgs/os-specific/linux/firmware/raspberrypi-wireless/default.nix +++ b/pkgs/os-specific/linux/firmware/raspberrypi-wireless/default.nix @@ -1,52 +1,51 @@ -{ stdenv, fetchurl, dpkg }: +{ stdenv, fetchurl, fetchFromGitHub, dpkg }: stdenv.mkDerivation rec { name = "raspberrypi-wireless-firmware-${version}"; - version = "2018-05-30"; + version = "2018-08-20"; srcs = [ - (fetchurl { - url = "https://archive.raspberrypi.org/debian/pool/main/b/bluez-firmware/bluez-firmware_1.2-3+rpt5.debian.tar.xz"; - sha256 = "06zpyrz6frkgjy26hr3998klnhjdqxwashgjgvj9rgbcqy70nkxg"; + (fetchFromGitHub { + name = "bluez-firmware"; + owner = "RPi-Distro"; + repo = "bluez-firmware"; + rev = "ade2bae1aaaebede09abb8fb546f767a0e4c7804"; + sha256 = "07gm76gxp5anv6paryvxcp34a86fkny8kdlzqhzcpfczzglkp6ag"; }) - (fetchurl { - url = "https://archive.raspberrypi.org/debian/pool/main/f/firmware-nonfree/firmware-brcm80211_20161130-3+rpt3_all.deb"; - sha256 = "10l74ac28baprnsiylf2vy4pkxgb3crixid90ngs6si9smm7rn6z"; + (fetchFromGitHub { + name = "firmware-nonfree"; + owner = "RPi-Distro"; + repo = "firmware-nonfree"; + rev = "b518de45ced519e8f7a499f4778100173402ae43"; + sha256 = "1d5026ic9awji6c67irpwsxpxgsc0dhn11d3abkxi2vvra1pir4g"; }) ]; sourceRoot = "."; + dontBuild = true; # Firmware blobs do not need fixing and should not be modified dontFixup = true; - - # Unpack the debian package - nativeBuildInputs = [ dpkg ]; - unpackCmd = '' - if ! [[ "$curSrc" =~ \.deb$ ]]; then return 1; fi - dpkg -x "$curSrc" . - ''; - installPhase = '' mkdir -p "$out/lib/firmware/brcm" # Wifi firmware - for filename in lib/firmware/brcm/brcmfmac434??-sdio.*; do + for filename in firmware-nonfree/brcm/brcmfmac434??-sdio.*; do cp "$filename" "$out/lib/firmware/brcm" done # Bluetooth firmware - cp broadcom/*.hcd "$out/lib/firmware/brcm" + cp bluez-firmware/broadcom/*.hcd "$out/lib/firmware/brcm" ''; outputHashMode = "recursive"; outputHashAlgo = "sha256"; - outputHash = "1gwzasl5w5nc0awqv3w2081ns63wd1yds0xh0dg95dc6brnqhhf8"; + outputHash = "1s5gb00v42s5izbaw8irs1fwvhh7z9wl07czc0nkw6p91871ivb7"; meta = with stdenv.lib; { description = "Firmware for builtin Wifi/Bluetooth devices in the Raspberry Pi 3 and Zero W"; - homepage = https://archive.raspberrypi.org/debian/pool/main/f/firmware-nonfree/; + homepage = https://github.com/RPi-Distro/firmware-nonfree; license = licenses.unfreeRedistributableFirmware; platforms = platforms.linux; maintainers = with maintainers; [ lopsided98 ]; diff --git a/pkgs/os-specific/linux/kernel/linux-4.14.nix b/pkgs/os-specific/linux/kernel/linux-4.14.nix index f4a728c9d25f..a5170edfa261 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.14.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.14.nix @@ -3,7 +3,7 @@ with stdenv.lib; buildLinux (args // rec { - version = "4.14.78"; + version = "4.14.79"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStrings (intersperse "." (take 3 (splitString "." "${version}.0"))) else modDirVersionArg; @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "0v2cwykgd2hxlqja4yl4pq45nhd5x8917ixqq7hj1r3ry304vnpl"; + sha256 = "0flkkgfjzs6z7hkr15lga8jvxgwn6wi885yf5wyr0zxjrqg0f6an"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.18.nix b/pkgs/os-specific/linux/kernel/linux-4.18.nix index d6c4b58b980a..add98cfb2faa 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.18.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.18.nix @@ -3,7 +3,7 @@ with stdenv.lib; buildLinux (args // rec { - version = "4.18.16"; + version = "4.18.17"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStrings (intersperse "." (take 3 (splitString "." "${version}.0"))) else modDirVersionArg; @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "1rjjkhl8lz4y4sn7icy8mp6p1x7rvapybp51p92sanbjy3i19fmy"; + sha256 = "0353ns09i5y0fcygvly20z0qrp6gcqd453186ihm4r7ajgh43bz2"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-4.19.nix b/pkgs/os-specific/linux/kernel/linux-4.19.nix index 5aa033348d4e..d597818dab68 100644 --- a/pkgs/os-specific/linux/kernel/linux-4.19.nix +++ b/pkgs/os-specific/linux/kernel/linux-4.19.nix @@ -3,7 +3,7 @@ with stdenv.lib; buildLinux (args // rec { - version = "4.19"; + version = "4.19.1"; # modDirVersion needs to be x.y.z, will automatically add .0 if needed modDirVersion = if (modDirVersionArg == null) then concatStrings (intersperse "." (take 3 (splitString "." "${version}.0"))) else modDirVersionArg; @@ -13,6 +13,6 @@ buildLinux (args // rec { src = fetchurl { url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz"; - sha256 = "18a92z17alh5kkvjv7l9z8wk5jgdb6raawdfkpwx9bi8amjzas0c"; + sha256 = "0ac8w310p83z11ksmyad7by7cmacwg4vq68pzxchc88bbk33gmk4"; }; } // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-beagleboard.nix b/pkgs/os-specific/linux/kernel/linux-beagleboard.nix deleted file mode 100644 index e98104f11ca9..000000000000 --- a/pkgs/os-specific/linux/kernel/linux-beagleboard.nix +++ /dev/null @@ -1,34 +0,0 @@ -{ stdenv, buildPackages, fetchFromGitHub, perl, buildLinux, ubootTools, dtc, ... } @ args: - -let - modDirVersion = "4.14.12"; - tag = "r23"; -in -stdenv.lib.overrideDerivation (buildLinux (args // rec { - version = "${modDirVersion}-ti-${tag}"; - inherit modDirVersion; - - src = fetchFromGitHub { - owner = "beagleboard"; - repo = "linux"; - rev = "${version}"; - sha256 = "07hdv2h12gsgafxsqqr7b0fir10rv9k66riklpjba2cg6x0p2nr4"; - }; - - kernelPatches = args.kernelPatches; - - features = { - efiBootStub = false; - } // (args.features or {}); - - extraMeta.hydraPlatforms = [ "armv7l-linux" ]; -} // (args.argsOverride or {}))) (oldAttrs: { - - # This kernel will run mkuboot.sh. - postPatch = '' - patchShebangs scripts/ - ''; - - nativeBuildInputs = oldAttrs.nativeBuildInputs ++ [ dtc ubootTools ]; - -}) diff --git a/pkgs/os-specific/linux/kernel/linux-hardkernel-4.14.nix b/pkgs/os-specific/linux/kernel/linux-hardkernel-4.14.nix index fc9cb2f238b2..8ad96f4f1bfb 100644 --- a/pkgs/os-specific/linux/kernel/linux-hardkernel-4.14.nix +++ b/pkgs/os-specific/linux/kernel/linux-hardkernel-4.14.nix @@ -1,10 +1,10 @@ { stdenv, buildPackages, fetchFromGitHub, perl, buildLinux, libelf, utillinux, ... } @ args: buildLinux (args // rec { - version = "4.14.73-149"; + version = "4.14.78-150"; # modDirVersion needs to be x.y.z. - modDirVersion = "4.14.73"; + modDirVersion = "4.14.78"; # branchVersion needs to be x.y. extraMeta.branch = "4.14"; @@ -13,7 +13,7 @@ buildLinux (args // rec { owner = "hardkernel"; repo = "linux"; rev = version; - sha256 = "1zc5py6v3xyvy6dwghnqb7nsn9l1aib3d96i5bqy9dd56vyiy5m2"; + sha256 = "0139qciaf1vlz41s9idjbcx20c1svrp1l7qaazfkwfx52ghb4pvv"; }; defconfig = "odroidxu4_defconfig"; diff --git a/pkgs/os-specific/linux/kernel/linux-riscv.nix b/pkgs/os-specific/linux/kernel/linux-riscv.nix deleted file mode 100644 index dbc69144c4da..000000000000 --- a/pkgs/os-specific/linux/kernel/linux-riscv.nix +++ /dev/null @@ -1,18 +0,0 @@ -{ stdenv, buildPackages, fetchFromGitHub, perl, buildLinux, libelf, utillinux, ... } @ args: - -buildLinux (args // rec { - version = "4.16-rc6"; - modDirVersion = "4.16.0-rc6"; - extraMeta.branch = "4.16"; - - src = fetchFromGitHub { - owner = "shlevy"; - repo ="riscv-linux"; - rev = "a54f259c2adce68e3bd7600be8989bf1ddf9ea3a"; - sha256 = "140w6mj4hm1vf4zsmcr2w5cghcaalbvw5d4m9z57dmq1z5plsl4q"; - }; - - # Should the testing kernels ever be built on Hydra? - extraMeta.hydraPlatforms = []; - -} // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-samus-4.12.nix b/pkgs/os-specific/linux/kernel/linux-samus-4.12.nix deleted file mode 100644 index 0a936c6c053b..000000000000 --- a/pkgs/os-specific/linux/kernel/linux-samus-4.12.nix +++ /dev/null @@ -1,16 +0,0 @@ -{ stdenv, buildPackages, fetchFromGitHub, perl, buildLinux, ncurses, ... } @ args: - -buildLinux (args // rec { - version = "4.12.2"; - extraMeta.branch = "4.12-2"; - - src = - let upstream = fetchFromGitHub { - owner = "raphael"; - repo = "linux-samus"; - rev = "v${extraMeta.branch}"; - sha256 = "1dr74i79p8r13522w2ppi8gnjd9bhngc9d2hsn91ji6f5a8fbxx9"; - }; in "${upstream}/build/linux"; - - extraMeta.platforms = [ "x86_64-linux" ]; -} // (args.argsOverride or {})) diff --git a/pkgs/os-specific/linux/kernel/linux-testing.nix b/pkgs/os-specific/linux/kernel/linux-testing.nix index f866d858eaeb..ad7e44ed0a17 100644 --- a/pkgs/os-specific/linux/kernel/linux-testing.nix +++ b/pkgs/os-specific/linux/kernel/linux-testing.nix @@ -1,13 +1,13 @@ { stdenv, buildPackages, fetchurl, perl, buildLinux, libelf, utillinux, ... } @ args: buildLinux (args // rec { - version = "4.19-rc8"; - modDirVersion = "4.19.0-rc8"; - extraMeta.branch = "4.19"; + version = "4.20-rc1"; + modDirVersion = "4.20.0-rc1"; + extraMeta.branch = "4.20"; src = fetchurl { url = "https://git.kernel.org/torvalds/t/linux-${version}.tar.gz"; - sha256 = "1xw8grzn4i4b2vprfwi4p4003n7rr9725dbiqyrl8w1pm11jwpin"; + sha256 = "0nf3rk8768740smkbf2ilsm40p1pnnmrpf53pmc5k1dkj4kgc0pb"; }; # Should the testing kernels ever be built on Hydra? diff --git a/pkgs/os-specific/linux/mdadm/default.nix b/pkgs/os-specific/linux/mdadm/default.nix index 52a5f16bc52c..c6c5f8436902 100644 --- a/pkgs/os-specific/linux/mdadm/default.nix +++ b/pkgs/os-specific/linux/mdadm/default.nix @@ -14,11 +14,11 @@ let ''; in stdenv.mkDerivation rec { - name = "mdadm-4.0"; + name = "mdadm-4.1"; src = fetchurl { url = "mirror://kernel/linux/utils/raid/mdadm/${name}.tar.xz"; - sha256 = "1ad3mma641946wn5lsllwf0lifw9lps34fv1nnkhyfpd9krffshx"; + sha256 = "0jjgjgqijpdp7ijh8slzzjjw690kydb1jjadf0x5ilq85628hxmb"; }; # This is to avoid self-references, which causes the initrd to explode @@ -47,6 +47,7 @@ stdenv.mkDerivation rec { description = "Programs for managing RAID arrays under Linux"; homepage = http://neil.brown.name/blog/mdadm; license = licenses.gpl2; + maintainers = with maintainers; [ ekleog ]; platforms = platforms.linux; }; } diff --git a/pkgs/os-specific/linux/nvidia-x11/default.nix b/pkgs/os-specific/linux/nvidia-x11/default.nix index 44598588db9d..97e5b3aa70ad 100644 --- a/pkgs/os-specific/linux/nvidia-x11/default.nix +++ b/pkgs/os-specific/linux/nvidia-x11/default.nix @@ -19,10 +19,10 @@ rec { stable = if stdenv.hostPlatform.system == "x86_64-linux" then stable_410 else stable_390; stable_410 = generic { - version = "410.66"; - sha256_64bit = "05xjzvj0fgmkpz36dbd7hy2vzl6xxiflzx7kml3k7ad9gy2svdlg"; - settingsSha256 = "1nsxz1byshgjs3c03lyx6ya36dp0f2vg2l0d9pkh1i6cpzkp53kz"; - persistencedSha256 = "0m4wdpb8w4y323d8py105p9hizwmf2ai8frkl7h77sn3ski17zw6"; + version = "410.73"; + sha256_64bit = "07pzq8rvbsx3v8rgz98amyw0k1mn5mkygpd1q5gfn6r0h7vrrg5y"; + settingsSha256 = "19xc10b0c074wb9fv9n04dvmi8hrwl6srvvyrjfyj92gch49x6hw"; + persistencedSha256 = "0vhr7pysv4vk7v96yima0i9zsvvgxaxihjzxlfifpsdki57n2jz7"; }; # Last one supporting x86 diff --git a/pkgs/os-specific/linux/pmtools/default.nix b/pkgs/os-specific/linux/pmtools/default.nix deleted file mode 100644 index a284924f0058..000000000000 --- a/pkgs/os-specific/linux/pmtools/default.nix +++ /dev/null @@ -1,23 +0,0 @@ -{ stdenv, fetchurl }: - -stdenv.mkDerivation rec { - name = "pmtools-20071116"; - - src = fetchurl { - url = "http://www.lesswatts.org/patches/linux_acpi/${name}.tar.gz"; - sha256 = "91751774976e39f6237efd0326eb35196a9346220b92ad35894a33283e872748"; - }; - - installPhase = '' - mkdir -p $out/bin $out/share/pmtools - cp acpidump/acpidump acpixtract/acpixtract madt/madt $out/bin/ - cp README $out/share/pmtools/ - ''; - - meta = { - homepage = http://www.lesswatts.org/projects/acpi/utilities.php; - description = "Linux ACPI utilities"; - license = stdenv.lib.licenses.gpl2; - platforms = stdenv.lib.platforms.linux; - }; -} diff --git a/pkgs/os-specific/linux/systemd/default.nix b/pkgs/os-specific/linux/systemd/default.nix index db64b8e6f6de..1d45109ac852 100644 --- a/pkgs/os-specific/linux/systemd/default.nix +++ b/pkgs/os-specific/linux/systemd/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchFromGitHub, fetchpatch, pkgconfig, intltool, gperf, libcap, kmod +{ stdenv, lib, fetchFromGitHub, fetchpatch, fetchurl, pkgconfig, intltool, gperf, libcap, kmod , xz, pam, acl, libuuid, m4, utillinux, libffi , glib, kbd, libxslt, coreutils, libgcrypt, libgpgerror, libidn2, libapparmor , audit, lz4, bzip2, libmicrohttpd, pcre2 @@ -30,6 +30,22 @@ in stdenv.mkDerivation rec { sha256 = "1xci0491j95vdjgs397n618zii3sgwnvanirkblqqw6bcvcjvir1"; }; + prePatch = let + # Upstream's maintenance branches are still too intrusive: + # https://github.com/systemd/systemd-stable/tree/v239-stable + patches-deb = fetchurl { + # When the URL disappears, it typically means that Debian has new patches + # (probably security) and updating to new tarball will apply them as well. + name = "systemd-debian-patches.tar.xz"; + url = mirror://debian/pool/main/s/systemd/systemd_239-11~bpo9+1.debian.tar.xz; + sha256 = "136f6p4jbi4z94mf4g099dfcacwka8jwhza0wxxw2q5l5q3xiysh"; + }; + # Note that we skip debian-specific patches, i.e. ./debian/patches/debian/* + in '' + tar xf ${patches-deb} + patches="$patches $(cat debian/patches/series | grep -v '^debian/' | sed 's|^|debian/patches/|')" + ''; + outputs = [ "out" "lib" "man" "dev" ]; nativeBuildInputs = diff --git a/pkgs/os-specific/linux/thunderbolt/default.nix b/pkgs/os-specific/linux/thunderbolt/default.nix index ac687de8c9ab..faf47c96a5e6 100644 --- a/pkgs/os-specific/linux/thunderbolt/default.nix +++ b/pkgs/os-specific/linux/thunderbolt/default.nix @@ -16,22 +16,13 @@ stdenv.mkDerivation rec { sha256 = "02w1bfm7xvq0dzkhwqiq0camkzz9kvciyhnsis61c8vzp39cwx0x"; }; - buildInputs = [ - boost - cmake - pkgconfig - txt2tags - ]; + nativeBuildInputs = [ cmake pkgconfig txt2tags ]; + buildInputs = [ boost ]; - # These can't go in the normal nix cmakeFlags because $out needs to be - # expanded by the shell, not by cmake or nix. $ENV{out} doesn't work right - # either; it results in /build/source/build//nix/store/blahblahblahblah/bin/ - # TODO: use ${placeholder "out"} when possible. - # See https://github.com/NixOS/nixpkgs/pull/37693 - preConfigure = '' - cmakeFlags+=" -DUDEV_BIN_DIR=$out/bin" - cmakeFlags+=" -DUDEV_RULES_DIR=$out/etc/udev/rules.d" - ''; + cmakeFlags = [ + "-DUDEV_BIN_DIR=${placeholder "out"}/bin" + "-DUDEV_RULES_DIR=${placeholder "out"}/etc/udev/rules.d" + ]; meta = { description = "Thunderbolt(TM) user-space components"; diff --git a/pkgs/os-specific/linux/upower/default.nix b/pkgs/os-specific/linux/upower/default.nix index 629f61bf5b16..6c6e411000ac 100644 --- a/pkgs/os-specific/linux/upower/default.nix +++ b/pkgs/os-specific/linux/upower/default.nix @@ -4,11 +4,11 @@ }: stdenv.mkDerivation rec { - name = "upower-0.99.7"; + name = "upower-0.99.9"; src = fetchurl { - url = "https://upower.freedesktop.org/releases/${name}.tar.xz"; - sha256 = "00d4830yvg84brdhz4kn60lr3r8rn2y8gdbhmhxm78i5mgvc5g14"; + url = https://gitlab.freedesktop.org/upower/upower/uploads/2282c7c0e53fb31816b824c9d1f547e8/upower-0.99.9.tar.xz; + sha256 = "046ix7j7hmb7ycv8v54668kjsrgjhzwxn299c1d87vdnkd38kfh1"; }; buildInputs = diff --git a/pkgs/os-specific/linux/zfs/default.nix b/pkgs/os-specific/linux/zfs/default.nix index cae06dbd0f38..ed83313e5ddf 100644 --- a/pkgs/os-specific/linux/zfs/default.nix +++ b/pkgs/os-specific/linux/zfs/default.nix @@ -158,7 +158,7 @@ in { # to be adapted zfsStable = common { # comment/uncomment if breaking kernel versions are known - # incompatibleKernelVersion = null; + incompatibleKernelVersion = "4.19"; # this package should point to the latest release. version = "0.7.11"; @@ -177,7 +177,7 @@ in { zfsUnstable = common rec { # comment/uncomment if breaking kernel versions are known - incompatibleKernelVersion = null; + incompatibleKernelVersion = "4.19"; # this package should point to a version / git revision compatible with the latest kernel release version = "0.8.0-rc1"; diff --git a/pkgs/servers/consul/Gemfile b/pkgs/servers/consul/Gemfile deleted file mode 100644 index 0e782af6b000..000000000000 --- a/pkgs/servers/consul/Gemfile +++ /dev/null @@ -1,5 +0,0 @@ -# A sample Gemfile -source "https://rubygems.org" - -gem "uglifier" -gem "sass" diff --git a/pkgs/servers/consul/Gemfile.lock b/pkgs/servers/consul/Gemfile.lock deleted file mode 100644 index 60a565f66951..000000000000 --- a/pkgs/servers/consul/Gemfile.lock +++ /dev/null @@ -1,25 +0,0 @@ -GEM - remote: https://rubygems.org/ - specs: - execjs (2.7.0) - ffi (1.9.23) - rb-fsevent (0.10.3) - rb-inotify (0.9.10) - ffi (>= 0.5.0, < 2) - sass (3.5.6) - sass-listen (~> 4.0.0) - sass-listen (4.0.0) - rb-fsevent (~> 0.9, >= 0.9.4) - rb-inotify (~> 0.9, >= 0.9.7) - uglifier (4.1.10) - execjs (>= 0.3.0, < 3) - -PLATFORMS - ruby - -DEPENDENCIES - sass - uglifier - -BUNDLED WITH - 1.14.6 diff --git a/pkgs/servers/consul/default.nix b/pkgs/servers/consul/default.nix index 5cf192791000..d1dcd78667f0 100644 --- a/pkgs/servers/consul/default.nix +++ b/pkgs/servers/consul/default.nix @@ -1,22 +1,27 @@ -{ stdenv, buildGoPackage, consul-ui, fetchFromGitHub }: +{ stdenv, buildGoPackage, fetchFromGitHub }: buildGoPackage rec { name = "consul-${version}"; - version = "0.9.3"; + version = "1.3.0"; rev = "v${version}"; goPackagePath = "github.com/hashicorp/consul"; + # Note: Currently only release tags are supported, because they have the Consul UI + # vendored. See + # https://github.com/NixOS/nixpkgs/pull/48714#issuecomment-433454834 + # If you want to use a non-release commit as `src`, you probably want to improve + # this derivation so that it can build the UI's JavaScript from source. + # See https://github.com/NixOS/nixpkgs/pull/49082 for something like that. + # Or, if you want to patch something that doesn't touch the UI, you may want + # to apply your changes as patches on top of a release commit. src = fetchFromGitHub { owner = "hashicorp"; repo = "consul"; inherit rev; - sha256 = "1176frp7kimpycsmz9wrbizf46jgxr8jq7hz5w4q1x90lswvrxv3"; + sha256 = "1zv84snvrjm74w3v3rr27linsbxj00m73xd047sb78a4766xs2h0"; }; - # Keep consul.ui for backward compatability - passthru.ui = consul-ui; - preBuild = '' buildFlagsArray+=("-ldflags" "-X github.com/hashicorp/consul/version.GitDescribe=v${version} -X github.com/hashicorp/consul/version.Version=${version} -X github.com/hashicorp/consul/version.VersionPrerelease=") ''; @@ -26,6 +31,6 @@ buildGoPackage rec { homepage = https://www.consul.io/; platforms = platforms.linux ++ platforms.darwin; license = licenses.mpl20; - maintainers = with maintainers; [ pradeepchhetri ]; + maintainers = with maintainers; [ pradeepchhetri vdemeester nh2 ]; }; } diff --git a/pkgs/servers/consul/gemset.nix b/pkgs/servers/consul/gemset.nix deleted file mode 100644 index 2a5425ccf5f5..000000000000 --- a/pkgs/servers/consul/gemset.nix +++ /dev/null @@ -1,62 +0,0 @@ -{ - execjs = { - source = { - remotes = ["https://rubygems.org"]; - sha256 = "1yz55sf2nd3l666ms6xr18sm2aggcvmb8qr3v53lr4rir32y1yp1"; - type = "gem"; - }; - version = "2.7.0"; - }; - ffi = { - source = { - remotes = ["https://rubygems.org"]; - sha256 = "0zw6pbyvmj8wafdc7l5h7w20zkp1vbr2805ql5d941g2b20pk4zr"; - type = "gem"; - }; - version = "1.9.23"; - }; - rb-fsevent = { - source = { - remotes = ["https://rubygems.org"]; - sha256 = "1lm1k7wpz69jx7jrc92w3ggczkjyjbfziq5mg62vjnxmzs383xx8"; - type = "gem"; - }; - version = "0.10.3"; - }; - rb-inotify = { - dependencies = ["ffi"]; - source = { - remotes = ["https://rubygems.org"]; - sha256 = "0yfsgw5n7pkpyky6a9wkf1g9jafxb0ja7gz0qw0y14fd2jnzfh71"; - type = "gem"; - }; - version = "0.9.10"; - }; - sass = { - dependencies = ["sass-listen"]; - source = { - remotes = ["https://rubygems.org"]; - sha256 = "19wyzp9qsg8hdkkxlsv713w0qmy66qrdp0shj42587ssx4qhrlag"; - type = "gem"; - }; - version = "3.5.6"; - }; - sass-listen = { - dependencies = ["rb-fsevent" "rb-inotify"]; - source = { - remotes = ["https://rubygems.org"]; - sha256 = "0xw3q46cmahkgyldid5hwyiwacp590zj2vmswlll68ryvmvcp7df"; - type = "gem"; - }; - version = "4.0.0"; - }; - uglifier = { - dependencies = ["execjs"]; - source = { - remotes = ["https://rubygems.org"]; - sha256 = "0dycp9c5xiricla6sgvg0vf22i3axs5k1v1607dvl7nv1xkkaczi"; - type = "gem"; - }; - version = "4.1.10"; - }; -} \ No newline at end of file diff --git a/pkgs/servers/consul/ui-no-bundle-exec.patch b/pkgs/servers/consul/ui-no-bundle-exec.patch deleted file mode 100644 index 5707b871049b..000000000000 --- a/pkgs/servers/consul/ui-no-bundle-exec.patch +++ /dev/null @@ -1,17 +0,0 @@ -diff --git a/ui/scripts/dist.sh b/ui/scripts/dist.sh -index 0ad6e28e..db340da0 100755 ---- a/ui/scripts/dist.sh -+++ b/ui/scripts/dist.sh -@@ -15,10 +15,9 @@ DEPLOY="../pkg/web_ui" - rm -rf $DEPLOY - mkdir -p $DEPLOY - --bundle check >/dev/null 2>&1 || bundle install --bundle exec sass styles/base.scss static/base.css -+sass styles/base.scss static/base.css - --bundle exec ruby scripts/compile.rb -+ruby scripts/compile.rb - - # Copy into deploy - shopt -s dotglob diff --git a/pkgs/servers/consul/ui.nix b/pkgs/servers/consul/ui.nix deleted file mode 100644 index da9b518bad73..000000000000 --- a/pkgs/servers/consul/ui.nix +++ /dev/null @@ -1,41 +0,0 @@ -{ stdenv, consul, ruby, bundlerEnv, zip, nodejs }: - -let - # `sass` et al - gems = bundlerEnv { - name = "consul-ui-deps"; - gemdir = ./.; - }; -in - -stdenv.mkDerivation { - name = "consul-ui-${consul.version}"; - - src = consul.src; - - buildInputs = [ ruby gems zip nodejs ]; - - patches = [ ./ui-no-bundle-exec.patch ]; - - postPatch = "patchShebangs ./ui/scripts/dist.sh"; - - buildPhase = '' - # Build ui static files - cd ui - make dist - ''; - - installPhase = '' - # Install ui static files - mkdir -p $out - mv ../pkg/web_ui/* $out - ''; - - meta = with stdenv.lib; { - homepage = https://www.consul.io/; - description = "A tool for service discovery, monitoring and configuration"; - maintainers = with maintainers; [ cstrahan wkennington ]; - license = licenses.mpl20 ; - platforms = platforms.unix; - }; -} diff --git a/pkgs/servers/dns/doh-proxy/default.nix b/pkgs/servers/dns/doh-proxy/default.nix new file mode 100644 index 000000000000..ac44dbbf04d1 --- /dev/null +++ b/pkgs/servers/dns/doh-proxy/default.nix @@ -0,0 +1,22 @@ +{ lib, python3Packages }: + +python3Packages.buildPythonApplication rec { + pname = "doh-proxy"; + version = "0.0.8"; + + src = python3Packages.fetchPypi { + inherit pname version; + sha256 = "0mfl84mcklby6cnsw29kpcxj7mh1cx5yw6mjs4sidr1psyni7x6c"; + }; + + propagatedBuildInputs = with python3Packages; + [ aioh2 dnspython aiohttp-remotes pytestrunner flake8 ]; + doCheck = false; # Trouble packaging unittest-data-provider + + meta = with lib; { + homepage = https://facebookexperimental.github.io/doh-proxy/; + description = "A proof of concept DNS-Over-HTTPS proxy"; + license = licenses.bsd3; + maintainers = [ maintainers.qyliss ]; + }; +} diff --git a/pkgs/servers/dns/knot-resolver/default.nix b/pkgs/servers/dns/knot-resolver/default.nix index b760b080ab78..ceefa542e6a4 100644 --- a/pkgs/servers/dns/knot-resolver/default.nix +++ b/pkgs/servers/dns/knot-resolver/default.nix @@ -12,11 +12,11 @@ inherit (stdenv.lib) optional concatStringsSep; unwrapped = stdenv.mkDerivation rec { name = "knot-resolver-${version}"; - version = "3.0.0"; + version = "3.1.0"; src = fetchurl { url = "https://secure.nic.cz/files/knot-resolver/${name}.tar.xz"; - sha256 = "68a0137e0e15061ee7dec53a2e424aa3266611720db3843853c6e7774a414f40"; + sha256 = "8f3deba4695784a666cde317bc6af80ecf42ce1047b01f4b9c582fdc021c7492"; }; outputs = [ "out" "dev" ]; diff --git a/pkgs/servers/home-assistant/component-packages.nix b/pkgs/servers/home-assistant/component-packages.nix index 6ad3facc0711..01232bd94704 100644 --- a/pkgs/servers/home-assistant/component-packages.nix +++ b/pkgs/servers/home-assistant/component-packages.nix @@ -2,7 +2,7 @@ # Do not edit! { - version = "0.81.0"; + version = "0.81.5"; components = { "abode" = ps: with ps; [ ]; "ads" = ps: with ps; [ ]; @@ -867,7 +867,7 @@ "sensor.bme680" = ps: with ps; [ ]; "sensor.bmw_connected_drive" = ps: with ps; [ ]; "sensor.bom" = ps: with ps; [ ]; - "sensor.broadlink" = ps: with ps; [ ]; + "sensor.broadlink" = ps: with ps; [ broadlink ]; "sensor.buienradar" = ps: with ps; [ ]; "sensor.canary" = ps: with ps; [ ]; "sensor.cert_expiry" = ps: with ps; [ ]; @@ -1166,7 +1166,7 @@ "switch.arduino" = ps: with ps; [ ]; "switch.arest" = ps: with ps; [ ]; "switch.bbb_gpio" = ps: with ps; [ ]; - "switch.broadlink" = ps: with ps; [ ]; + "switch.broadlink" = ps: with ps; [ broadlink ]; "switch.command_line" = ps: with ps; [ ]; "switch.deconz" = ps: with ps; [ ]; "switch.deluge" = ps: with ps; [ deluge-client ]; diff --git a/pkgs/servers/home-assistant/default.nix b/pkgs/servers/home-assistant/default.nix index 48ad27c96199..427f35e2fbcd 100644 --- a/pkgs/servers/home-assistant/default.nix +++ b/pkgs/servers/home-assistant/default.nix @@ -34,8 +34,8 @@ let "8d10113ca826a4c29d5b85b2c4e045ffa8bad74fb525ee0eceb1d38d4c70dfd6") (mkOverride "cryptography_vectors" "2.3.1" # required by cryptography==2.3.1 "bf4d9b61dce69c49e830950aa36fad194706463b0b6dfe81425b9e0bc6644d46") - (mkOverride "requests" "2.19.1" - "ec22d826a36ed72a7358ff3fe56cbd4ba69dd7a6718ffd450ff0e9df7a47ce6a") + (mkOverride "requests" "2.20.0" + "99dcfdaaeb17caf6e526f32b6a7b780461512ab3f1d992187801694cba42770c") (mkOverride "voluptuous" "0.11.5" "567a56286ef82a9d7ae0628c5842f65f516abcb496e74f3f59f1d7b28df314ef") (mkOverride "voluptuous-serialize" "2.0.0" @@ -79,7 +79,7 @@ let extraBuildInputs = extraPackages py.pkgs; # Don't forget to run parse-requirements.py after updating - hassVersion = "0.81.0"; + hassVersion = "0.81.5"; in with py.pkgs; buildPythonApplication rec { pname = "homeassistant"; @@ -94,7 +94,7 @@ in with py.pkgs; buildPythonApplication rec { owner = "home-assistant"; repo = "home-assistant"; rev = version; - sha256 = "05cdx2pax7vx0v7arnciqrq38k2xyiv7iagxd3qs5m6gra72qlqw"; + sha256 = "1fgf9hrv7q7g8s561sir951vd27a459mh3k685xzfnhkh4si47g4"; }; propagatedBuildInputs = [ diff --git a/pkgs/servers/home-assistant/frontend.nix b/pkgs/servers/home-assistant/frontend.nix index 7bf1e6871411..89d77649d971 100644 --- a/pkgs/servers/home-assistant/frontend.nix +++ b/pkgs/servers/home-assistant/frontend.nix @@ -2,11 +2,11 @@ buildPythonPackage rec { pname = "home-assistant-frontend"; - version = "20181026.0"; + version = "20181026.4"; src = fetchPypi { inherit pname version; - sha256 = "fa877803ec7201a9b2129e96d6c19822cbcb28fa8ad5d422974bd3c872da1531"; + sha256 = "b0610206eee06042847d89a581ecfcd71255b0e1ecff77e302237e8aa175b00d"; }; propagatedBuildInputs = [ user-agents ]; diff --git a/pkgs/servers/http/apache-modules/tomcat-connectors/default.nix b/pkgs/servers/http/apache-modules/tomcat-connectors/default.nix index e569ae8f8706..138864aec7d0 100644 --- a/pkgs/servers/http/apache-modules/tomcat-connectors/default.nix +++ b/pkgs/servers/http/apache-modules/tomcat-connectors/default.nix @@ -1,11 +1,11 @@ { stdenv, fetchurl, apacheHttpd, jdk }: stdenv.mkDerivation rec { - name = "tomcat-connectors-1.2.41-dev-1613051"; + name = "tomcat-connectors-1.2.46"; src = fetchurl { - url = "https://people.apache.org/~rjung/mod_jk-dev/${name}-src.tar.gz"; - sha256 = "11khipjpy3y84j1pp7yyx76y64jccvyhh3klwzqxylff49vjc2fc"; + url = "mirror://apache/tomcat/tomcat-connectors/jk/${name}-src.tar.gz"; + sha256 = "1sfbcsmshjkj4wc969ngjcxhjyp4mbkjprbs111d1b0x3l7547by"; }; configureFlags = [ @@ -24,7 +24,10 @@ stdenv.mkDerivation rec { buildInputs = [ apacheHttpd jdk ]; - meta = { - platforms = stdenv.lib.platforms.unix; + meta = with stdenv.lib; { + description = "Provides web server plugins to connect web servers with Tomcat"; + homepage = https://tomcat.apache.org/download-connectors.cgi; + license = licenses.asl20; + platforms = platforms.unix; }; } diff --git a/pkgs/servers/icecast/default.nix b/pkgs/servers/icecast/default.nix index f1bd1a4c9d86..55ec611d6053 100644 --- a/pkgs/servers/icecast/default.nix +++ b/pkgs/servers/icecast/default.nix @@ -3,11 +3,11 @@ , libvorbis, libtheora, speex, libkate, libopus }: stdenv.mkDerivation rec { - name = "icecast-2.4.3"; + name = "icecast-2.4.4"; src = fetchurl { url = "http://downloads.xiph.org/releases/icecast/${name}.tar.gz"; - sha256 = "14n5vm2xnyn8y7kl46lnnlgv6v5fjykhc57ffdsh0qaxfs6a8p68"; + sha256 = "0i2d9rhav0x6js2qhjf5iy6j2a7f0d11ail0lfv40hb1kygrgda9"; }; buildInputs = [ libxml2 libxslt curl libvorbis libtheora speex libkate libopus ]; diff --git a/pkgs/servers/matrix-synapse/default.nix b/pkgs/servers/matrix-synapse/default.nix index dab58d2edd6b..e0c666b002a9 100644 --- a/pkgs/servers/matrix-synapse/default.nix +++ b/pkgs/servers/matrix-synapse/default.nix @@ -1,4 +1,6 @@ -{ stdenv, python2Packages, fetchurl, fetchFromGitHub }: +{ lib, stdenv, python2Packages, fetchurl, fetchFromGitHub +, enableSystemd ? true +}: let matrix-angular-sdk = python2Packages.buildPythonPackage rec { name = "matrix-angular-sdk-${version}"; @@ -26,13 +28,13 @@ let }; in python2Packages.buildPythonApplication rec { name = "matrix-synapse-${version}"; - version = "0.33.6"; + version = "0.33.8"; src = fetchFromGitHub { owner = "matrix-org"; repo = "synapse"; rev = "v${version}"; - sha256 = "0c1dr09f1msv6xvpmdlncx7yyj6qxnpihd93lqckd115fds12g5h"; + sha256 = "122ba09xkc1x35qaajcynkjikg342259rgy81m8abz0l8mcg4mkm"; }; patches = [ @@ -40,16 +42,41 @@ in python2Packages.buildPythonApplication rec { ]; propagatedBuildInputs = with python2Packages; [ - blist canonicaljson daemonize dateutil frozendict pillow pyasn1 - pydenticon pymacaroons-pynacl pynacl pyopenssl pysaml2 pytz requests - signedjson systemd twisted ujson unpaddedbase64 pyyaml prometheus_client - matrix-angular-sdk bleach netaddr jinja2 psycopg2 - psutil msgpack-python lxml matrix-synapse-ldap3 - phonenumbers jsonschema affinity bcrypt sortedcontainers treq - ]; + bcrypt + bleach + canonicaljson + daemonize + dateutil + frozendict + jinja2 + jsonschema + lxml + matrix-angular-sdk + matrix-synapse-ldap3 + msgpack-python + netaddr + phonenumbers + pillow + prometheus_client + psutil + psycopg2 + pyasn1 + pydenticon + pymacaroons-pynacl + pynacl + pyopenssl + pysaml2 + pyyaml + requests + signedjson + sortedcontainers + treq + twisted + unpaddedbase64 + ] ++ lib.optional enableSystemd systemd; - # Checks fail because of Tox. - doCheck = false; + doCheck = true; + checkPhase = "python -m twisted.trial test"; buildInputs = with python2Packages; [ mock setuptoolsTrial diff --git a/pkgs/servers/miniflux/default.nix b/pkgs/servers/miniflux/default.nix new file mode 100644 index 000000000000..80fb5575e4d4 --- /dev/null +++ b/pkgs/servers/miniflux/default.nix @@ -0,0 +1,38 @@ +{ stdenv +, buildGoPackage +, fetchFromGitHub +}: + +buildGoPackage rec { + name = "miniflux-${version}"; + version = "2.0.12"; + + goPackagePath = "miniflux.app"; + + src = fetchFromGitHub { + owner = "miniflux"; + repo = "miniflux"; + rev = "refs/tags/${version}"; + sha256 = "13d1dwcwig7b5phymgxqm227k5l3zzzvx997cywarbl953ji2y1d"; + }; + + goDeps = ./deps.nix; + + doCheck = true; + + buildFlagsArray = '' + -ldflags=-X ${goPackagePath}/version.Version=${version} + ''; + + postInstall = '' + mv $bin/bin/miniflux.app $bin/bin/miniflux + ''; + + meta = with stdenv.lib; { + description = "Miniflux is a minimalist and opinionated feed reader."; + homepage = https://miniflux.app/; + license = licenses.asl20; + maintainers = with maintainers; [ benpye ]; + }; +} + diff --git a/pkgs/servers/miniflux/deps.nix b/pkgs/servers/miniflux/deps.nix new file mode 100644 index 000000000000..4ef30bec3b8d --- /dev/null +++ b/pkgs/servers/miniflux/deps.nix @@ -0,0 +1,153 @@ +# file generated from go.mod using vgo2nix (https://github.com/adisbladis/vgo2nix) +[ + + { + goPackagePath = "github.com/PuerkitoBio/goquery"; + fetch = { + type = "git"; + url = "https://github.com/PuerkitoBio/goquery"; + rev = "v1.4.1"; + sha256 = "11010z9ask21r0dskvm2pbh3z8951bnpcqg8aqa213if4h34gaa2"; + }; + } + + { + goPackagePath = "github.com/andybalholm/cascadia"; + fetch = { + type = "git"; + url = "https://github.com/andybalholm/cascadia"; + rev = "v1.0.0"; + sha256 = "09j8cavbhqqdxjqrkwbc40g8p0i49zf3184rpjm5p2rjbprcghcc"; + }; + } + + { + goPackagePath = "github.com/golang/protobuf"; + fetch = { + type = "git"; + url = "https://github.com/golang/protobuf"; + rev = "v1.1.0"; + sha256 = "0ya4ha7m20bw048m1159ppqzlvda4x0vdprlbk5sdgmy74h3xcdq"; + }; + } + + { + goPackagePath = "github.com/gorilla/context"; + fetch = { + type = "git"; + url = "https://github.com/gorilla/context"; + rev = "v1.1.1"; + sha256 = "03p4hn87vcmfih0p9w663qbx9lpsf7i7j3lc7yl7n84la3yz63m4"; + }; + } + + { + goPackagePath = "github.com/gorilla/mux"; + fetch = { + type = "git"; + url = "https://github.com/gorilla/mux"; + rev = "v1.6.2"; + sha256 = "0pvzm23hklxysspnz52mih6h1q74vfrdhjfm1l3sa9r8hhqmmld2"; + }; + } + + { + goPackagePath = "github.com/lib/pq"; + fetch = { + type = "git"; + url = "https://github.com/lib/pq"; + rev = "v1.0.0"; + sha256 = "1zqnnyczaf00xi6xh53vq758v5bdlf0iz7kf22l02cal4i6px47i"; + }; + } + + { + goPackagePath = "github.com/tdewolff/minify"; + fetch = { + type = "git"; + url = "https://github.com/tdewolff/minify"; + rev = "v2.3.5"; + sha256 = "0x67kgjhc6mfzjhr4xmw0j3qapzhkgwwahvv5b44rb449ml2qx5m"; + }; + } + + { + goPackagePath = "github.com/tdewolff/parse"; + fetch = { + type = "git"; + url = "https://github.com/tdewolff/parse"; + rev = "v2.3.3"; + sha256 = "190y2jykp8qyp6y58ky1v1fvmaqjnrsr1ksbqrrspf1gpjy69i94"; + }; + } + + { + goPackagePath = "golang.org/x/crypto"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/crypto"; + rev = "614d502a4dac"; + sha256 = "1rcyvsl8b8pk7h8lwl0fpiflrx8zs121wi5490ln0qnvkk8d4bwy"; + }; + } + + { + goPackagePath = "golang.org/x/net"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/net"; + rev = "8a410e7b638d"; + sha256 = "0hp0l8f6fir5gmgrjq0mhh5ikc0rlrm72774228800kfwqjrxxny"; + }; + } + + { + goPackagePath = "golang.org/x/oauth2"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/oauth2"; + rev = "d2e6202438be"; + sha256 = "0wbn75fd10485nb93bm4kqldqifdim5xqy4v7r5sdvimvf3fyhn7"; + }; + } + + { + goPackagePath = "golang.org/x/sync"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/sync"; + rev = "1d60e4601c6f"; + sha256 = "046jlanz2lkxq1r57x9bl6s4cvfqaic6p2xybsj8mq1120jv4rs6"; + }; + } + + { + goPackagePath = "golang.org/x/sys"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/sys"; + rev = "4910a1d54f87"; + sha256 = "0p2pp6mny34gjcvylx3ddzdaxn7hv008hppsr11w1bvyzj7s27by"; + }; + } + + { + goPackagePath = "golang.org/x/text"; + fetch = { + type = "git"; + url = "https://go.googlesource.com/text"; + rev = "v0.3.0"; + sha256 = "0r6x6zjzhr8ksqlpiwm5gdd7s209kwk5p4lw54xjvz10cs3qlq19"; + }; + } + + { + goPackagePath = "google.golang.org/appengine"; + fetch = { + type = "git"; + url = "https://github.com/golang/appengine"; + rev = "v1.1.0"; + sha256 = "1pz202zszg8f35dk5pfhwgcdi3r6dx1l4yk6x6ly7nb4j45zi96x"; + }; + } +] diff --git a/pkgs/servers/monitoring/kapacitor/default.nix b/pkgs/servers/monitoring/kapacitor/default.nix index 0e21069bbb0e..969a58aff85d 100644 --- a/pkgs/servers/monitoring/kapacitor/default.nix +++ b/pkgs/servers/monitoring/kapacitor/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "kapacitor-${version}"; - version = "1.4.0"; + version = "1.5.1"; goPackagePath = "github.com/influxdata/kapacitor"; @@ -10,7 +10,7 @@ buildGoPackage rec { owner = "influxdata"; repo = "kapacitor"; rev = "v${version}"; - sha256 = "1qanf7qljzqqkyw2cdazg0ll13q8a3fs3sqydcgfbgpdmf707sj2"; + sha256 = "17f3my1zmqmcx7qqhdcq8n73l60bsxnnxqgvnw0cnf0xsa5g1yks"; }; meta = with lib; { diff --git a/pkgs/servers/osrm-backend/default.nix b/pkgs/servers/osrm-backend/default.nix index 04fd2e37b357..97612f656cbc 100644 --- a/pkgs/servers/osrm-backend/default.nix +++ b/pkgs/servers/osrm-backend/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "osrm-backend-${version}"; - version = "5.18.0"; + version = "5.19.0"; src = fetchFromGitHub { rev = "v${version}"; owner = "Project-OSRM"; repo = "osrm-backend"; - sha256 = "0ffdw02rgjb4z7xi8fk97c0hl1i7z04csjh3yd18zsb19bk1mkva"; + sha256 = "1y3k2j4c3jparzm9ck1jkw5g12jr6kd9llq50jran2dwikc6hpyz"; }; nativeBuildInputs = [ cmake pkgconfig ]; diff --git a/pkgs/servers/plex/default.nix b/pkgs/servers/plex/default.nix index b562df681a06..4e783f3a507e 100644 --- a/pkgs/servers/plex/default.nix +++ b/pkgs/servers/plex/default.nix @@ -6,9 +6,9 @@ let plexPass = throw "Plex pass has been removed at upstream's request; please unset nixpkgs.config.plex.pass"; plexpkg = if enablePlexPass then plexPass else { - version = "1.13.8.5395"; - vsnHash = "10d48da0d"; - sha256 = "0lpsh87kcrqwi2qqkj1ccb86hif535yb45hhc41c0ixsfxbqk5cw"; + version = "1.13.9.5456"; + vsnHash = "ecd600442"; + sha256 = "6d1125d4e6eaa94a84f8c600230b867c2d0764644adbc959a96433b8fc210b61"; }; in stdenv.mkDerivation rec { diff --git a/pkgs/servers/radicale/default.nix b/pkgs/servers/radicale/default.nix index 1d8d97f4bde5..90e27b2907e5 100644 --- a/pkgs/servers/radicale/default.nix +++ b/pkgs/servers/radicale/default.nix @@ -2,14 +2,14 @@ python3.pkgs.buildPythonApplication rec { pname = "Radicale"; - version = "2.1.10"; + version = "2.1.11"; # No tests in PyPI tarball src = fetchFromGitHub { owner = "Kozea"; repo = "Radicale"; rev = version; - sha256 = "0ik9gvljxhmykkzzcv9kmkp4qjwgdrl9f7hp6300flx5kmqlcjb1"; + sha256 = "1k32iy55lnyyp1r75clarhwdqvw6w8mxb5v0l5aysga07fg2mix4"; }; # We only want functional tests diff --git a/pkgs/servers/search/solr/default.nix b/pkgs/servers/search/solr/default.nix index 0326784b2ac8..04e85212f3cd 100644 --- a/pkgs/servers/search/solr/default.nix +++ b/pkgs/servers/search/solr/default.nix @@ -1,20 +1,27 @@ -{ stdenv, fetchurl }: +{ stdenv, fetchurl, jre, makeWrapper }: stdenv.mkDerivation rec { name = "solr-${version}"; - version = "4.10.3"; + version = "7.5.0"; src = fetchurl { url = "mirror://apache/lucene/solr/${version}/solr-${version}.tgz"; - sha256 = "1dp269jka4q62qhv47j91wsrsnbxfn23lsx6qcycbijrlyh28w5c"; + sha256 = "1g6f58j2pzb73phj4hfri9mj7vmql72by7w3xrbq1pbnqgzxmhpa"; }; - phases = [ "unpackPhase" "installPhase" ]; + nativeBuildInputs = [ makeWrapper ]; installPhase = '' - mkdir -p $out/lib - cp dist/${name}.war $out/lib/solr.war - cp -r example/lib/ext $out/lib/ext + mkdir -p $out $out/bin + + cp -r bin/solr bin/post $out/bin/ + cp -r contrib $out/ + cp -r dist $out/ + cp -r example $out/ + cp -r server $out/ + + wrapProgram $out/bin/solr --set JAVA_HOME "${jre}" + wrapProgram $out/bin/post --set JAVA_HOME "${jre}" ''; meta = with stdenv.lib; { @@ -22,7 +29,7 @@ stdenv.mkDerivation rec { description = "Open source enterprise search platform from the Apache Lucene project"; license = licenses.asl20; platforms = platforms.all; - maintainers = [ maintainers.rickynils maintainers.domenkozar ]; + maintainers = [ maintainers.rickynils maintainers.domenkozar maintainers.aanderse ]; }; } diff --git a/pkgs/servers/sql/postgresql/default.nix b/pkgs/servers/sql/postgresql/default.nix index bccd54ca4ba8..f8bf08b55b7d 100644 --- a/pkgs/servers/sql/postgresql/default.nix +++ b/pkgs/servers/sql/postgresql/default.nix @@ -89,44 +89,50 @@ let }; meta = with lib; { - homepage = https://www.postgresql.org; + homepage = https://www.postgresql.org; description = "A powerful, open source object-relational database system"; - license = licenses.postgresql; - maintainers = [ maintainers.ocharles ]; - platforms = platforms.unix; + license = licenses.postgresql; + maintainers = with maintainers; [ ocharles thoughtpolice ]; + platforms = platforms.unix; }; }); in { - postgresql93 = common { + postgresql_9_3 = common { version = "9.3.24"; psqlSchema = "9.3"; sha256 = "1a8dnv16n2rxnbwhqw7c0kjpj3xqvkpwk50kvimj4d917cxaf542"; }; - postgresql94 = common { + postgresql_9_4 = common { version = "9.4.19"; psqlSchema = "9.4"; sha256 = "12qn9h47rkn4k41gdbxkkvg0pff43k1113jmhc83f19adc1nnxq3"; }; - postgresql95 = common { + postgresql_9_5 = common { version = "9.5.14"; psqlSchema = "9.5"; sha256 = "0k8s62h6qd9p3xlx315j5irniskqsnx1nz4ir5r1yhqp07mdab1y"; }; - postgresql96 = common { + postgresql_9_6 = common { version = "9.6.10"; psqlSchema = "9.6"; sha256 = "09l4zqs74fqnazdsyln9x657mq3wsbgng9wpvq71yh26cv2sq5c6"; }; - postgresql100 = common { + postgresql_10 = common { version = "10.5"; psqlSchema = "10.0"; sha256 = "04a07jkvc5s6zgh6jr78149kcjmsxclizsqabjw44ld4j5n633kc"; }; + postgresql_11 = common { + version = "11.0"; + psqlSchema = "11.0"; + sha256 = "0szk9ssfych1wlpyqxz3z6dllg1l6m5labpii8c2r463s01vm6xz"; + }; + } diff --git a/pkgs/servers/sql/postgresql/pg_hll/default.nix b/pkgs/servers/sql/postgresql/pg_hll/default.nix index 6c453f6a40c3..f91a8b1bf252 100644 --- a/pkgs/servers/sql/postgresql/pg_hll/default.nix +++ b/pkgs/servers/sql/postgresql/pg_hll/default.nix @@ -2,15 +2,15 @@ stdenv.mkDerivation rec { name = "pg_hll-${version}"; - version = "2.10.2-${builtins.substring 0 7 src.rev}"; + version = "2.12"; buildInputs = [ postgresql ]; src = fetchFromGitHub { owner = "citusdata"; repo = "postgresql-hll"; - rev = "9af41684d479a3097bab87d04936702c9e6baf5c"; - sha256 = "044x9v9kjhxb0idqb9f5i7c3yygxxsqliswl4kspqy9f9qcblckl"; + rev = "refs/tags/v${version}"; + sha256 = "1jdc9gjqc3dkjxv855q1p594j0awhrrymrcqnl5vw5vx2ny3bpgn"; }; installPhase = '' diff --git a/pkgs/servers/sql/postgresql/pg_repack/default.nix b/pkgs/servers/sql/postgresql/pg_repack/default.nix index a50605bd0409..14f71b1e2b3b 100644 --- a/pkgs/servers/sql/postgresql/pg_repack/default.nix +++ b/pkgs/servers/sql/postgresql/pg_repack/default.nix @@ -1,35 +1,35 @@ { stdenv, fetchFromGitHub, postgresql, openssl, zlib, readline }: stdenv.mkDerivation rec { - name = "pg_repack-${version}"; - version = "1.4.4"; + name = "pg_repack-${version}"; + version = "1.4.4"; - buildInputs = [ postgresql openssl zlib readline ]; + buildInputs = [ postgresql openssl zlib readline ]; - src = fetchFromGitHub { - owner = "reorg"; - repo = "pg_repack"; - rev = "refs/tags/ver_${version}"; - sha256 = "0ynsmsxfkcp82ccpz2nrgg8wiil8yxqigvw6425lx8v80h5lszbw"; - }; + src = fetchFromGitHub { + owner = "reorg"; + repo = "pg_repack"; + rev = "refs/tags/ver_${version}"; + sha256 = "0ynsmsxfkcp82ccpz2nrgg8wiil8yxqigvw6425lx8v80h5lszbw"; + }; - installPhase = '' - install -D bin/pg_repack -t $out/bin/ - install -D lib/pg_repack.so -t $out/lib/ - install -D lib/{pg_repack--${version}.sql,pg_repack.control} -t $out/share/extension - ''; + installPhase = '' + install -D bin/pg_repack -t $out/bin/ + install -D lib/pg_repack.so -t $out/lib/ + install -D lib/{pg_repack--${version}.sql,pg_repack.control} -t $out/share/extension + ''; - meta = with stdenv.lib; { - description = "Reorganize tables in PostgreSQL databases with minimal locks"; - longDescription = '' - pg_repack is a PostgreSQL extension which lets you remove bloat from tables and indexes, and optionally restore - the physical order of clustered indexes. Unlike CLUSTER and VACUUM FULL it works online, without holding an - exclusive lock on the processed tables during processing. pg_repack is efficient to boot, - with performance comparable to using CLUSTER directly. - ''; - license = licenses.bsd3; - maintainers = with maintainers; [ danbst ]; - inherit (postgresql.meta) platforms; - inherit (src.meta) homepage; - }; + meta = with stdenv.lib; { + description = "Reorganize tables in PostgreSQL databases with minimal locks"; + longDescription = '' + pg_repack is a PostgreSQL extension which lets you remove bloat from tables and indexes, and optionally restore + the physical order of clustered indexes. Unlike CLUSTER and VACUUM FULL it works online, without holding an + exclusive lock on the processed tables during processing. pg_repack is efficient to boot, + with performance comparable to using CLUSTER directly. + ''; + license = licenses.bsd3; + maintainers = with maintainers; [ danbst ]; + inherit (postgresql.meta) platforms; + inherit (src.meta) homepage; + }; } diff --git a/pkgs/servers/sql/postgresql/pgjwt/default.nix b/pkgs/servers/sql/postgresql/pgjwt/default.nix index 3e01d9bfe2ca..ab7ba8943a7b 100644 --- a/pkgs/servers/sql/postgresql/pgjwt/default.nix +++ b/pkgs/servers/sql/postgresql/pgjwt/default.nix @@ -1,19 +1,23 @@ -{ stdenv, fetchFromGitHub }: +{ stdenv, fetchFromGitHub, postgresql }: + stdenv.mkDerivation rec { - name = "pgjwt-${version}"; + name = "pgjwt-${version}"; version = "unstable-2017-04-24"; + src = fetchFromGitHub { - owner = "michelp"; - repo = "pgjwt"; - rev = "546a2911027b716586e241be7fd4c6f1785237cd"; + owner = "michelp"; + repo = "pgjwt"; + rev = "546a2911027b716586e241be7fd4c6f1785237cd"; sha256 = "1riz0xvwb6y02j0fljbr9hcbqb2jqs4njlivmavy9ysbcrrv1vrf"; }; - dontBuild = true; + + buildPhase = ":"; installPhase = '' mkdir -p $out/bin # current postgresql extension mechanism in nixos requires bin directory mkdir -p $out/share/extension cp pg*sql *.control $out/share/extension ''; + meta = with stdenv.lib; { description = "PostgreSQL implementation of JSON Web Tokens"; longDescription = '' diff --git a/pkgs/servers/sql/postgresql/plv8/default.nix b/pkgs/servers/sql/postgresql/plv8/default.nix index 009f65b9d81c..dae3b2fd1af1 100644 --- a/pkgs/servers/sql/postgresql/plv8/default.nix +++ b/pkgs/servers/sql/postgresql/plv8/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { name = "plv8-${version}"; - version = "2.1.0"; + version = "2.3.8"; nativeBuildInputs = [ perl ]; buildInputs = [ v8 postgresql ]; @@ -11,16 +11,20 @@ stdenv.mkDerivation rec { owner = "plv8"; repo = "plv8"; rev = "v${version}"; - sha256 = "1sfpxz0zcbinn6822j12lkwgrw9kfacrs83ic968rm489rl9w241"; + sha256 = "0hrmn1zzzdf52zwldg6axv57p0f3b279l9s8lbpijcv60fqrzx16"; }; + makeFlags = [ "--makefile=Makefile.shared" ]; + preConfigure = '' - substituteInPlace Makefile --replace '-lv8_libplatform' '-lv8_libplatform -lv8_libbase' + patchShebangs ./generate_upgrade.sh ''; + buildPhase = "make -f Makefile.shared all"; + installPhase = '' mkdir -p $out/bin - install -D plv8.so -t $out/lib + install -D plv8*.so -t $out/lib install -D {plls,plcoffee,plv8}{--${version}.sql,.control} -t $out/share/extension ''; diff --git a/pkgs/servers/sql/postgresql/timescaledb/default.nix b/pkgs/servers/sql/postgresql/timescaledb/default.nix index fab515035ce6..3c53054ba7de 100644 --- a/pkgs/servers/sql/postgresql/timescaledb/default.nix +++ b/pkgs/servers/sql/postgresql/timescaledb/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, cmake, postgresql }: +{ stdenv, fetchFromGitHub, cmake, postgresql, openssl }: # # To enable on NixOS: # config.services.postgresql = { @@ -8,16 +8,16 @@ stdenv.mkDerivation rec { name = "timescaledb-${version}"; - version = "0.11.0"; + version = "1.0.0"; nativeBuildInputs = [ cmake ]; - buildInputs = [ postgresql ]; + buildInputs = [ postgresql openssl ]; src = fetchFromGitHub { owner = "timescale"; repo = "timescaledb"; rev = "refs/tags/${version}"; - sha256 = "06xysf45r0c2sjfl6vgdbrm7pn7nxx2n0k29bm88q0ipyyp9fr0v"; + sha256 = "1359jc0dw8q3f0iipqfadzs8lvri9qa5w59ziz00x1d09ppw2q40"; }; # Fix the install phase which tries to install into the pgsql extension dir, @@ -46,6 +46,6 @@ stdenv.mkDerivation rec { homepage = https://www.timescale.com/; maintainers = with maintainers; [ volth ]; platforms = platforms.linux; - license = licenses.postgresql; + license = licenses.asl20; }; } diff --git a/pkgs/servers/sql/postgresql/topn/default.nix b/pkgs/servers/sql/postgresql/topn/default.nix index 6886c80cf50d..dae30aadabd0 100644 --- a/pkgs/servers/sql/postgresql/topn/default.nix +++ b/pkgs/servers/sql/postgresql/topn/default.nix @@ -2,7 +2,7 @@ stdenv.mkDerivation rec { name = "pg_topn-${version}"; - version = "2.0.2"; + version = "2.2.0"; nativeBuildInputs = [ protobufc ]; buildInputs = [ postgresql ]; @@ -11,7 +11,7 @@ stdenv.mkDerivation rec { owner = "citusdata"; repo = "postgresql-topn"; rev = "refs/tags/v${version}"; - sha256 = "00hc3hgnqv9xaalizbcvprb7s55sydj2qgk3rhgrdlwg2g025h62"; + sha256 = "1i5fn517mdvzfhlcj7fh4z0iniynanshcn7kzhsq19sgci0g31fr"; }; installPhase = '' diff --git a/pkgs/servers/sql/postgresql/tsearch_extras/default.nix b/pkgs/servers/sql/postgresql/tsearch_extras/default.nix index 5140ae1a228f..b43a9c51be0c 100644 --- a/pkgs/servers/sql/postgresql/tsearch_extras/default.nix +++ b/pkgs/servers/sql/postgresql/tsearch_extras/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "tsearch-extras-${version}"; - version = "0.3"; + version = "0.4"; src = fetchFromGitHub { - owner = "zulip"; - repo = "tsearch_extras"; - rev = version; - sha256 = "0i3i99lw80jwd4xflgdqabxmn1dnm1gm7dzf1mqv2drllxcy3yix"; + owner = "zulip"; + repo = "tsearch_extras"; + rev = "84e78f00931c4ef261d98197d6b5d94fc141f742"; # no release tag? + sha256 = "18j0saqblg3jhrz38splk173xjwdf32c67ymm18m8n5y94h8d2ba"; }; nativenativeBuildInputs = [ pkgconfig ]; diff --git a/pkgs/servers/x11/quartz-wm/default.nix b/pkgs/servers/x11/quartz-wm/default.nix index d724a81debbb..ccb3937ac85f 100644 --- a/pkgs/servers/x11/quartz-wm/default.nix +++ b/pkgs/servers/x11/quartz-wm/default.nix @@ -1,4 +1,4 @@ -{ stdenv, lib, fetchurl, xorg, pixman, pkgconfig, AppKit, Xplugin, darwin }: +{ stdenv, fetchurl, xorg, pixman, pkgconfig, AppKit, Foundation, Xplugin, cf-private }: let version = "1.3.1"; in stdenv.mkDerivation { @@ -19,9 +19,11 @@ in stdenv.mkDerivation { xorg.libXext pixman pkgconfig - AppKit Xplugin darwin.apple_sdk.frameworks.Foundation + AppKit Xplugin Foundation + # Needed for CFNotificationCenterAddObserver symbols. + cf-private ]; - meta = with lib; { + meta = with stdenv.lib; { license = licenses.apsl20; platforms = platforms.darwin; maintainers = with maintainers; [ matthewbauer ]; diff --git a/pkgs/servers/x11/xorg/overrides.nix b/pkgs/servers/x11/xorg/overrides.nix index 58688590b84e..8f4c251335a9 100644 --- a/pkgs/servers/x11/xorg/overrides.nix +++ b/pkgs/servers/x11/xorg/overrides.nix @@ -2,10 +2,12 @@ stdenv, makeWrapper, lib, fetchurl, fetchpatch, automake, autoconf, libtool, intltool, mtdev, libevdev, libinput, - python, freetype, apple_sdk, tradcpp, fontconfig, mesa_drivers, + python, freetype, tradcpp, fontconfig, libGL, spice-protocol, zlib, libGLU, dbus, libunwind, libdrm, mesa_noglu, udev, bootstrap_cmds, bison, flex, clangStdenv, autoreconfHook, - mcpp, epoxy, openssl, pkgconfig }: + mcpp, epoxy, openssl, pkgconfig, llvm_6, + cf-private, ApplicationServices, Carbon, Cocoa, Xplugin +}: let inherit (stdenv) lib isDarwin; @@ -108,9 +110,9 @@ self: super: }); libAppleWM = super.libAppleWM.overrideAttrs (attrs: { - buildInputs = attrs.buildInputs ++ [ apple_sdk.frameworks.ApplicationServices ]; + buildInputs = attrs.buildInputs ++ [ ApplicationServices ]; preConfigure = '' - substituteInPlace src/Makefile.in --replace -F/System -F${apple_sdk.frameworks.ApplicationServices} + substituteInPlace src/Makefile.in --replace -F/System -F${ApplicationServices} ''; }); @@ -394,7 +396,7 @@ self: super: }); xf86videovmware = super.xf86videovmware.overrideAttrs (attrs: { - buildInputs = attrs.buildInputs ++ [ mesa_drivers ]; # for libxatracker + buildInputs = attrs.buildInputs ++ [ mesa_noglu llvm_6 ]; # for libxatracker meta = attrs.meta // { platforms = ["i686-linux" "x86_64-linux"]; }; @@ -466,7 +468,11 @@ self: super: sha256 = "1j1i3n5xy1wawhk95kxqdc54h34kg7xp4nnramba2q8xqfr5k117"; }; nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ dri2proto dri3proto renderproto libdrm openssl libX11 libXau libXaw libxcb xcbutil xcbutilwm xcbutilimage xcbutilkeysyms xcbutilrenderutil libXdmcp libXfixes libxkbfile libXmu libXpm libXrender libXres libXt ]; + buildInputs = [ dri2proto dri3proto renderproto libdrm openssl libX11 libXau libXaw libxcb xcbutil xcbutilwm xcbutilimage xcbutilkeysyms xcbutilrenderutil libXdmcp libXfixes libxkbfile libXmu libXpm libXrender libXres libXt ] + ++ stdenv.lib.optionals stdenv.isDarwin [ + # Needed for NSDefaultRunLoopMode symbols. + cf-private + ]; postPatch = stdenv.lib.optionalString stdenv.isLinux "sed '1i#include <malloc.h>' -i include/os.h"; meta.platforms = stdenv.lib.platforms.unix; } else throw "unsupported xorg abiCompat ${abiCompat} for ${attrs_passed.name}"; @@ -538,9 +544,7 @@ self: super: nativeBuildInputs = attrs.nativeBuildInputs ++ [ autoreconfHook self.utilmacros self.fontutil ]; buildInputs = commonBuildInputs ++ [ bootstrap_cmds automake autoconf - apple_sdk.libs.Xplugin - apple_sdk.frameworks.Carbon - apple_sdk.frameworks.Cocoa + Xplugin Carbon Cocoa ]; propagatedBuildInputs = commonPropagatedBuildInputs ++ [ libAppleWM applewmproto @@ -582,7 +586,7 @@ self: super: preConfigure = '' mkdir -p $out/Applications export NIX_CFLAGS_COMPILE="$NIX_CFLAGS_COMPILE -Wno-error" - substituteInPlace hw/xquartz/pbproxy/Makefile.in --replace -F/System -F${apple_sdk.frameworks.ApplicationServices} + substituteInPlace hw/xquartz/pbproxy/Makefile.in --replace -F/System -F${ApplicationServices} ''; postInstall = '' rm -fr $out/share/X11/xkb/compiled diff --git a/pkgs/servers/x11/xquartz/default.nix b/pkgs/servers/x11/xquartz/default.nix index 3fc7aaea9c93..8cb96d0ae39f 100644 --- a/pkgs/servers/x11/xquartz/default.nix +++ b/pkgs/servers/x11/xquartz/default.nix @@ -1,6 +1,7 @@ -{ stdenv, lib, buildEnv, makeFontsConf, gnused, writeScript, xorg, bashInteractive, xterm, makeWrapper, ruby +{ stdenv, buildEnv, makeFontsConf, gnused, writeScript, xorg, bashInteractive, xterm, makeWrapper, ruby , quartz-wm, fontconfig, xlsfonts, xfontsel , ttf_bitstream_vera, freefont_ttf, liberation_ttf +, cf-private , shell ? "${bashInteractive}/bin/bash" }: @@ -97,7 +98,11 @@ let in stdenv.mkDerivation { name = "xquartz-${stdenv.lib.getVersion xorg.xorgserver}"; - buildInputs = [ ruby makeWrapper ]; + buildInputs = [ + ruby makeWrapper + # Needed for NSDefaultRunLoopMode symbols. + cf-private + ]; unpackPhase = "sourceRoot=."; @@ -134,7 +139,7 @@ in stdenv.mkDerivation { defaultStartX="$out/bin/startx -- $out/bin/Xquartz" ruby ${./patch_plist.rb} \ - ${lib.escapeShellArg (builtins.toXML { + ${stdenv.lib.escapeShellArg (builtins.toXML { XQUARTZ_DEFAULT_CLIENT = "${xterm}/bin/xterm"; XQUARTZ_DEFAULT_SHELL = "${shell}"; XQUARTZ_DEFAULT_STARTX = "@STARTX@"; @@ -179,7 +184,7 @@ in stdenv.mkDerivation { --replace "@FONTCONFIG_FILE@" "$fontsConfPath" ''; - meta = with lib; { + meta = with stdenv.lib; { platforms = platforms.darwin; maintainers = with maintainers; [ cstrahan ]; license = licenses.mit; diff --git a/pkgs/shells/zsh/zsh-git-prompt/default.nix b/pkgs/shells/zsh/zsh-git-prompt/default.nix index 7318da83d176..761ad071da95 100644 --- a/pkgs/shells/zsh/zsh-git-prompt/default.nix +++ b/pkgs/shells/zsh/zsh-git-prompt/default.nix @@ -29,10 +29,10 @@ , python , git , lib -, ghcVersion ? "ghc802" +, haskellPackages }: -haskell.packages.${ghcVersion}.callPackage +haskellPackages.callPackage ({ mkDerivation, base, HUnit, parsec, process, QuickCheck, stdenv }: mkDerivation rec { pname = "zsh-git-prompt"; diff --git a/pkgs/stdenv/linux/make-bootstrap-tools.nix b/pkgs/stdenv/linux/make-bootstrap-tools.nix index 59ded9d81108..f4184b92bd5f 100644 --- a/pkgs/stdenv/linux/make-bootstrap-tools.nix +++ b/pkgs/stdenv/linux/make-bootstrap-tools.nix @@ -19,7 +19,7 @@ in with pkgs; rec { tarMinimal = gnutar.override { acl = null; }; busyboxMinimal = busybox.override { - useMusl = !targetPlatform.isRiscV; + useMusl = !stdenv.targetPlatform.isRiscV; enableStatic = true; enableMinimal = true; extraConfig = '' @@ -44,7 +44,7 @@ in with pkgs; rec { set -x mkdir -p $out/bin $out/lib $out/libexec - '' + (if (hostPlatform.libc == "glibc") then '' + '' + (if (stdenv.hostPlatform.libc == "glibc") then '' # Copy what we need of Glibc. cp -d ${libc.out}/lib/ld*.so* $out/lib cp -d ${libc.out}/lib/libc*.so* $out/lib @@ -75,7 +75,7 @@ in with pkgs; rec { find $out/include -name .install -exec rm {} \; find $out/include -name ..install.cmd -exec rm {} \; mv $out/include $out/include-glibc - '' else if (hostPlatform.libc == "musl") then '' + '' else if (stdenv.hostPlatform.libc == "musl") then '' # Copy what we need from musl cp ${libc.out}/lib/* $out/lib cp -rL ${libc.dev}/include $out @@ -137,7 +137,7 @@ in with pkgs; rec { cp -d ${zlib.out}/lib/libz.so* $out/lib cp -d ${libelf}/lib/libelf.so* $out/lib - '' + lib.optionalString (hostPlatform != buildPlatform) '' + '' + lib.optionalString (stdenv.hostPlatform != stdenv.buildPlatform) '' # These needed for cross but not native tools because the stdenv # GCC has certain things built in statically. See # pkgs/stdenv/linux/default.nix for the details. @@ -199,21 +199,21 @@ in with pkgs; rec { bootstrapTools = runCommand "bootstrap-tools.tar.xz" {} "cp ${build}/on-server/bootstrap-tools.tar.xz $out"; }; - bootstrapTools = if (hostPlatform.libc == "glibc") then + bootstrapTools = if (stdenv.hostPlatform.libc == "glibc") then import ./bootstrap-tools { - inherit (hostPlatform) system; + inherit (stdenv.buildPlatform) system; # Used to determine where to build inherit bootstrapFiles; } - else if (hostPlatform.libc == "musl") then + else if (stdenv.hostPlatform.libc == "musl") then import ./bootstrap-tools-musl { - inherit (hostPlatform) system; + inherit (stdenv.buildPlatform) system; # Used to determine where to build inherit bootstrapFiles; } else throw "unsupported libc"; test = derivation { name = "test-bootstrap-tools"; - inherit (hostPlatform) system; + inherit (stdenv.hostPlatform) system; # We cannot "cross test" builder = bootstrapFiles.busybox; args = [ "ash" "-e" "-c" "eval \"$buildCommand\"" ]; @@ -232,12 +232,12 @@ in with pkgs; rec { grep --version gcc --version - '' + lib.optionalString (hostPlatform.libc == "glibc") '' + '' + lib.optionalString (stdenv.hostPlatform.libc == "glibc") '' ldlinux=$(echo ${bootstrapTools}/lib/ld-linux*.so.?) export CPP="cpp -idirafter ${bootstrapTools}/include-glibc -B${bootstrapTools}" export CC="gcc -idirafter ${bootstrapTools}/include-glibc -B${bootstrapTools} -Wl,-dynamic-linker,$ldlinux -Wl,-rpath,${bootstrapTools}/lib" export CXX="g++ -idirafter ${bootstrapTools}/include-glibc -B${bootstrapTools} -Wl,-dynamic-linker,$ldlinux -Wl,-rpath,${bootstrapTools}/lib" - '' + lib.optionalString (hostPlatform.libc == "musl") '' + '' + lib.optionalString (stdenv.hostPlatform.libc == "musl") '' ldmusl=$(echo ${bootstrapTools}/lib/ld-musl*.so.?) export CPP="cpp -idirafter ${bootstrapTools}/include-libc -B${bootstrapTools}" export CC="gcc -idirafter ${bootstrapTools}/include-libc -B${bootstrapTools} -Wl,-dynamic-linker,$ldmusl -Wl,-rpath,${bootstrapTools}/lib" diff --git a/pkgs/tools/X11/xidlehook/default.nix b/pkgs/tools/X11/xidlehook/default.nix index b96235341401..0c64cbefb3ed 100644 --- a/pkgs/tools/X11/xidlehook/default.nix +++ b/pkgs/tools/X11/xidlehook/default.nix @@ -1,22 +1,22 @@ -{ lib, stdenv, rustPlatform, fetchFromGitHub +{ lib, stdenv, rustPlatform, fetchFromGitLab , xlibsWrapper, xorg, libpulseaudio, pkgconfig, patchelf }: rustPlatform.buildRustPackage rec { name = "xidlehook-${version}"; - version = "0.4.9"; + version = "0.5.0"; doCheck = false; - src = fetchFromGitHub { + src = fetchFromGitLab { owner = "jD91mZM2"; repo = "xidlehook"; rev = version; - sha256 = "1l2kmymwxal9v5g3q21i985yc201dpybp85qfws2n5rzw8qpg1dw"; + sha256 = "1qrjwk91i31rww5lwgp84hc4h3b1prm60y45jm1f28g2bbv2qy19"; }; cargoBuildFlags = lib.optionals (!stdenv.isLinux) ["--no-default-features" "--features" "pulse"]; - cargoSha256 = "1mrg59flmmqg5wwi2l8lw6p1xpgdw597fdfsmpn8b126rgzqmjl8"; + cargoSha256 = "1pdhbqnkgwp2v5zyin8z8049aq8c3kfk04v9wsbz8qla34rgi99s"; buildInputs = [ xlibsWrapper xorg.libXScrnSaver libpulseaudio ]; nativeBuildInputs = [ pkgconfig patchelf ]; diff --git a/pkgs/tools/admin/ansible/default.nix b/pkgs/tools/admin/ansible/default.nix index 2b6877cb25f5..c86a108fc425 100644 --- a/pkgs/tools/admin/ansible/default.nix +++ b/pkgs/tools/admin/ansible/default.nix @@ -53,15 +53,20 @@ in rec { }; ansible_2_5 = generic { - version = "2.5.2"; - sha256 = "1r9sq30xz3jrvx6yqssj5wmkml1f75rx1amd7g89f3ryngrq6m59"; + version = "2.5.11"; + sha256 = "07rhgkl3a2ba59rqh9pyz1p661gc389shlwa2sw1m6wwifg4lm24"; }; ansible_2_6 = generic { - version = "2.6.2"; - sha256 = "1y5gd9h641p6pphwd7j99yyqglyj23rkmid7wgzk62611754qzkl"; + version = "2.6.7"; + sha256 = "10pakw9k9wd3cy1qk3ah2253ph7c7h3qzpal4k0s5lschzgy2fh0"; }; - ansible2 = ansible_2_6; + ansible_2_7 = generic { + version = "2.7.1"; + sha256 = "0fg95x2nr3j4rwnlyd2n03h91xx9fssi34c32356vk3z6ir395g7"; + }; + + ansible2 = ansible_2_7; ansible = ansible2; } diff --git a/pkgs/tools/admin/fastlane/Gemfile.lock b/pkgs/tools/admin/fastlane/Gemfile.lock index 631d9cb9628a..88162a3432d9 100644 --- a/pkgs/tools/admin/fastlane/Gemfile.lock +++ b/pkgs/tools/admin/fastlane/Gemfile.lock @@ -26,7 +26,7 @@ GEM faraday_middleware (0.12.2) faraday (>= 0.7.4, < 1.0) fastimage (2.1.4) - fastlane (2.105.2) + fastlane (2.107.0) CFPropertyList (>= 2.3, < 4.0.0) addressable (>= 2.3, < 3.0.0) babosa (>= 1.0.2, < 2.0.0) @@ -71,10 +71,10 @@ GEM representable (~> 3.0) retriable (>= 2.0, < 4.0) signet (~> 0.9) - googleauth (0.6.6) + googleauth (0.6.7) faraday (~> 0.12) jwt (>= 1.4, < 3.0) - memoist (~> 0.12) + memoist (~> 0.16) multi_json (~> 1.11) os (>= 0.9, < 2.0) signet (~> 0.7) @@ -105,7 +105,7 @@ GEM rouge (2.0.7) rubyzip (1.2.2) security (0.1.3) - signet (0.10.0) + signet (0.11.0) addressable (~> 2.3) faraday (~> 0.9) jwt (>= 1.5, < 3.0) @@ -127,7 +127,7 @@ GEM unf_ext (0.0.7.5) unicode-display_width (1.4.0) word_wrap (1.0.0) - xcodeproj (1.6.0) + xcodeproj (1.7.0) CFPropertyList (>= 2.3.3, < 4.0) atomos (~> 0.1.3) claide (>= 1.0.2, < 2.0) diff --git a/pkgs/tools/admin/fastlane/gemset.nix b/pkgs/tools/admin/fastlane/gemset.nix index c2133c7c8c9c..5afad1683c99 100644 --- a/pkgs/tools/admin/fastlane/gemset.nix +++ b/pkgs/tools/admin/fastlane/gemset.nix @@ -153,10 +153,10 @@ dependencies = ["CFPropertyList" "addressable" "babosa" "colored" "commander-fastlane" "dotenv" "emoji_regex" "excon" "faraday" "faraday-cookie_jar" "faraday_middleware" "fastimage" "gh_inspector" "google-api-client" "highline" "json" "mini_magick" "multi_json" "multi_xml" "multipart-post" "plist" "public_suffix" "rubyzip" "security" "simctl" "slack-notifier" "terminal-notifier" "terminal-table" "tty-screen" "tty-spinner" "word_wrap" "xcodeproj" "xcpretty" "xcpretty-travis-formatter"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "1fq1zqvwim939klkx2893cbm1v4gi3a991qrj8933l3qg1y41fx2"; + sha256 = "1d3jv7ik3rivmhxzcapia2lzf9xjmjgi4yxkl60ly6pcbbvhl48w"; type = "gem"; }; - version = "2.105.2"; + version = "2.107.0"; }; gh_inspector = { source = { @@ -179,10 +179,10 @@ dependencies = ["faraday" "jwt" "memoist" "multi_json" "os" "signet"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "1747p1dhpvz76i98xnjrvaj785y1232svm0nc8g9by6pz835gp2l"; + sha256 = "1yj7j1rnyamxpn5ybgdgbiw89v9bq2r0h85s2y2jzvqanvm7iflq"; type = "gem"; }; - version = "0.6.6"; + version = "0.6.7"; }; highline = { source = { @@ -367,10 +367,10 @@ dependencies = ["addressable" "faraday" "jwt" "multi_json"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "14rhv3riz6ki4ix4l79b6ckq7d015673gxkxvzdcxjl1h8plpdcy"; + sha256 = "1f5d3bz5bjc4b0r2jmqd15qf07lgsqkgd25f0h46jihrf9l5fsi4"; type = "gem"; }; - version = "0.10.0"; + version = "0.11.0"; }; simctl = { dependencies = ["CFPropertyList" "naturally"]; @@ -476,10 +476,10 @@ dependencies = ["CFPropertyList" "atomos" "claide" "colored2" "nanaimo"]; source = { remotes = ["https://rubygems.org"]; - sha256 = "1f4shbzff3wsk1jq0v9bs10496qdx69k2jfpf11p4q2ik3jdnsv7"; + sha256 = "1hy2ihcqfjlsrnf8qkm51m1kk154yp0l0007f269ky8j9z5lyw3p"; type = "gem"; }; - version = "1.6.0"; + version = "1.7.0"; }; xcpretty = { dependencies = ["rouge"]; diff --git a/pkgs/tools/admin/google-cloud-sdk/default.nix b/pkgs/tools/admin/google-cloud-sdk/default.nix index 016ea957f6c7..aa8cc12ece85 100644 --- a/pkgs/tools/admin/google-cloud-sdk/default.nix +++ b/pkgs/tools/admin/google-cloud-sdk/default.nix @@ -19,18 +19,18 @@ let sources = name: system: { x86_64-darwin = { url = "${baseUrl}/${name}-darwin-x86_64.tar.gz"; - sha256 = "1d5z575vw07jk7528bsqgdd875b3zwayrdnidvxpd2n8j4bip654"; + sha256 = "03ymvfhk8azyvdm6j4pbqx2fsh178kw81yqwkycbhmm6mnyc8yv1"; }; x86_64-linux = { url = "${baseUrl}/${name}-linux-x86_64.tar.gz"; - sha256 = "0ljslvp68ml5mglrl7kakgkqskbzglf3i5jv5d7jld28d0kbzj2c"; + sha256 = "1pw4w3v81mp8alm6vxq10242xxwv8rfs59bjxrmy0pfkjgsr4x4v"; }; }.${system}; in stdenv.mkDerivation rec { name = "google-cloud-sdk-${version}"; - version = "215.0.0"; + version = "222.0.0"; src = fetchurl (sources name stdenv.hostPlatform.system); diff --git a/pkgs/tools/admin/nomachine-client/default.nix b/pkgs/tools/admin/nomachine-client/default.nix new file mode 100644 index 000000000000..be616c1bf9e0 --- /dev/null +++ b/pkgs/tools/admin/nomachine-client/default.nix @@ -0,0 +1,83 @@ +{ stdenv, lib, file, fetchurl, makeWrapper, autoPatchelfHook, jsoncpp }: +let + versionMajor = "6.3"; + versionMinor = "6_1"; +in + stdenv.mkDerivation rec { + name = "nomachine-client-${version}"; + version = "${versionMajor}.${versionMinor}"; + + src = + if stdenv.hostPlatform.system == "x86_64-linux" then + fetchurl { + url = "https://download.nomachine.com/download/${versionMajor}/Linux/nomachine_${version}_x86_64.tar.gz"; + sha256 = "1035j2z2rqmdfb8cfm1pakd05c575640604b8lkljmilpky9mw5d"; + } + else if stdenv.hostPlatform.system == "i686-linux" then + fetchurl { + url = "https://download.nomachine.com/download/${versionMajor}/Linux/nomachine_${version}_i686.tar.gz"; + sha256 = "07j9f6mlq9m01ch8ik5dybi283vrp5dlv156jr5n7n2chzk34kf3"; + } + else + throw "NoMachine client is not supported on ${stdenv.hostPlatform.system}"; + + postUnpack = '' + mv $(find . -type f -name nxclient.tar.gz) . + mv $(find . -type f -name nxplayer.tar.gz) . + rm -r NX/ + tar xf nxclient.tar.gz + tar xf nxplayer.tar.gz + rm $(find . -maxdepth 1 -type f) + ''; + + nativeBuildInputs = [ file makeWrapper autoPatchelfHook ]; + buildInputs = [ jsoncpp ]; + + installPhase = '' + rm bin/nxplayer bin/nxclient + + mkdir -p $out/NX + cp -r bin lib share $out/NX/ + + ln -s $out/NX/bin $out/bin + + for i in share/icons/*; do + if [[ -d "$i" ]]; then + mkdir -p "$out/share/icons/hicolor/$(basename $i)/apps" + cp "$i"/* "$out/share/icons/hicolor/$(basename $i)/apps/" + fi + done + + mkdir $out/share/applications + cp share/applnk/player/xdg/*.desktop $out/share/applications/ + cp share/applnk/client/xdg-mime/*.desktop $out/share/applications/ + + mkdir -p $out/share/mime/packages + cp share/applnk/client/xdg-mime/*.xml $out/share/mime/packages/ + + for i in $out/share/applications/*.desktop; do + substituteInPlace "$i" --replace /usr/NX/bin $out/bin + done + ''; + + postFixup = '' + makeWrapper $out/bin/nxplayer.bin $out/bin/nxplayer --set NX_SYSTEM $out/NX + makeWrapper $out/bin/nxclient.bin $out/bin/nxclient --set NX_SYSTEM $out/NX + ''; + + dontBuild = true; + dontStrip = true; + + meta = with stdenv.lib; { + description = "NoMachine remote desktop client (nxplayer)"; + homepage = https://www.nomachine.com/; + license = { + fullName = "NoMachine 6 End-User License Agreement"; + url = https://www.nomachine.com/licensing-6; + free = false; + }; + maintainers = with maintainers; [ talyz ]; + platforms = [ "x86_64-linux" "i686-linux" ]; + }; + } + diff --git a/pkgs/tools/audio/abcmidi/default.nix b/pkgs/tools/audio/abcmidi/default.nix index 2d54c182349c..1a215d4ca83b 100644 --- a/pkgs/tools/audio/abcmidi/default.nix +++ b/pkgs/tools/audio/abcmidi/default.nix @@ -2,11 +2,11 @@ stdenv.mkDerivation rec { name = "abcMIDI-${version}"; - version = "2018.06.23"; + version = "2018.10.25"; src = fetchzip { url = "https://ifdo.ca/~seymour/runabc/${name}.zip"; - sha256 = "0487dlw9v4ayb929w8bk71fs4nbcs1liyk59g6sfr4yn6dx2sl2d"; + sha256 = "0q7yrds1hpis1821mdsz31c2cvn7hs73a10fi1mrk1v4hqql8vv3"; }; # There is also a file called "makefile" which seems to be preferred by the standard build phase diff --git a/pkgs/tools/backup/bup/default.nix b/pkgs/tools/backup/bup/default.nix index f24e89fcc840..bf10f556b6bb 100644 --- a/pkgs/tools/backup/bup/default.nix +++ b/pkgs/tools/backup/bup/default.nix @@ -5,7 +5,7 @@ assert par2Support -> par2cmdline != null; -let version = "0.29.1"; in +let version = "0.29.2"; in with stdenv.lib; @@ -16,7 +16,7 @@ stdenv.mkDerivation rec { repo = "bup"; owner = "bup"; rev = version; - sha256 = "0wdr399jf64zzzsdvldhrwvnh5xpbghjvslr1j2cwr5y4i36znxf"; + sha256 = "17lpbyhf43gcln5s43m2zzgichcx7jq6ragcawfklw6svg1vnj89"; }; buildInputs = [ diff --git a/pkgs/tools/backup/easysnap/default.nix b/pkgs/tools/backup/easysnap/default.nix new file mode 100644 index 000000000000..a8c726c9e161 --- /dev/null +++ b/pkgs/tools/backup/easysnap/default.nix @@ -0,0 +1,31 @@ +{stdenv, fetchFromGitHub, zfs }: + +stdenv.mkDerivation rec { + name = "easysnap-${version}"; + version = "unstable-2018-10-28"; + + src = fetchFromGitHub { + owner = "sjau"; + repo = "easysnap"; + rev = "aa2768762da7730aa3eb90fdc2190a8359976edc"; + sha256 = "0csn7capsmlkin4cf1fgl766gvszvqfllqkiyz0g9bvbapxv7nba"; + }; + + installPhase = '' + mkdir -p $out/bin + cp -n easysnap* $out/bin/ + + for i in $out/bin/*; do + substituteInPlace $i \ + --replace zfs ${zfs}/bin/zfs + done + ''; + + meta = with stdenv.lib; { + homepage = https://github.com/sjau/easysnap; + description = "Customizable ZFS Snapshotting tool with zfs send/recv pulling"; + license = licenses.gpl3; + maintainers = with maintainers; [ sjau ]; + }; + +} diff --git a/pkgs/tools/graphics/vulkan-tools/default.nix b/pkgs/tools/graphics/vulkan-tools/default.nix index 0d8f5bfe1bc7..afb6812b3a3a 100644 --- a/pkgs/tools/graphics/vulkan-tools/default.nix +++ b/pkgs/tools/graphics/vulkan-tools/default.nix @@ -3,17 +3,17 @@ stdenv.mkDerivation rec { name = "vulkan-tools-${version}"; - version = "1.1.82.0"; + version = "1.1.85.0"; src = fetchFromGitHub { owner = "KhronosGroup"; repo = "Vulkan-Tools"; rev = "sdk-${version}"; - sha256 = "1viaqp1zfdgli3hw674rz8mrfzxpgv12vxcd07czwr8nyb19f2g5"; + sha256 = "0f4dfr8g0vy7y1hvs6z9lw52kissailzisby4qnz4akv0zz5y5s5"; }; - nativeBuildInputs = [ pkgconfig ]; - buildInputs = [ cmake python3 vulkan-loader xlibsWrapper libxcb libXrandr wayland ]; + nativeBuildInputs = [ cmake pkgconfig ]; + buildInputs = [ python3 vulkan-loader xlibsWrapper libxcb libXrandr wayland ]; enableParallelBuilding = true; cmakeFlags = [ "-DBUILD_ICD=OFF" "-DGLSLANG_INSTALL_DIR=${glslang}" ]; diff --git a/pkgs/tools/inputmethods/ibus/default.nix b/pkgs/tools/inputmethods/ibus/default.nix index 540779477e35..3b6f3c989a33 100644 --- a/pkgs/tools/inputmethods/ibus/default.nix +++ b/pkgs/tools/inputmethods/ibus/default.nix @@ -1,7 +1,8 @@ { stdenv, fetchurl, fetchFromGitHub, autoreconfHook, gconf, intltool, makeWrapper, pkgconfig , vala, wrapGAppsHook, dbus, dconf ? null, glib, gdk_pixbuf, gobjectIntrospection, gtk2 , gtk3, gtk-doc, isocodes, python3, json-glib, libnotify ? null, enablePythonLibrary ? true -, enableUI ? true, withWayland ? false, libxkbcommon ? null, wayland ? null }: +, enableUI ? true, withWayland ? false, libxkbcommon ? null, wayland ? null +, buildPackages }: assert withWayland -> wayland != null && libxkbcommon != null; @@ -76,7 +77,7 @@ stdenv.mkDerivation rec { substituteInPlace data/dconf/Makefile.am --replace "dconf update" true substituteInPlace configure.ac --replace '$python2dir/ibus' $out/${python3.sitePackages}/ibus echo \#!${stdenv.shell} > data/dconf/make-dconf-override-db.sh - cp ${gtk-doc}/share/gtk-doc/data/gtk-doc.make . + cp ${buildPackages.gtk-doc}/share/gtk-doc/data/gtk-doc.make . ''; preAutoreconf = "touch ChangeLog"; diff --git a/pkgs/tools/misc/bat/default.nix b/pkgs/tools/misc/bat/default.nix index 4bd4a02c7a2d..d449b3b82f92 100644 --- a/pkgs/tools/misc/bat/default.nix +++ b/pkgs/tools/misc/bat/default.nix @@ -20,6 +20,9 @@ rustPlatform.buildRustPackage rec { buildInputs = stdenv.lib.optionals stdenv.isDarwin [ Security libiconv ]; + # https://github.com/NixOS/nixpkgs/issues/49642 + doCheck = !stdenv.isDarwin; + postInstall = '' install -m 444 -Dt $out/share/man/man1 doc/bat.1 diff --git a/pkgs/tools/misc/contacts/default.nix b/pkgs/tools/misc/contacts/default.nix index dc8f776cef66..b262626b1363 100644 --- a/pkgs/tools/misc/contacts/default.nix +++ b/pkgs/tools/misc/contacts/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchurl, xcbuildHook, Foundation, AddressBook }: +{ stdenv, fetchurl, xcbuildHook, cf-private, Foundation, AddressBook }: stdenv.mkDerivation rec { version = "1.1a-3"; @@ -10,16 +10,18 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ xcbuildHook ]; - buildInputs = [ Foundation AddressBook ]; + + buildInputs = [ + Foundation AddressBook + # Needed for OBJC_CLASS_$_NSArray symbols. + cf-private + ]; installPhase = '' mkdir -p $out/bin cp Products/Default/contacts $out/bin ''; - ## FIXME: the framework setup hook isn't adding these correctly - NIX_LDFLAGS = " -F${Foundation}/Library/Frameworks/ -F${AddressBook}/Library/Frameworks/"; - meta = with stdenv.lib; { description = "Access contacts from the Mac address book from command-line"; homepage = http://www.gnufoo.org/contacts/contacts.html; diff --git a/pkgs/tools/misc/fd/default.nix b/pkgs/tools/misc/fd/default.nix index 48ca8ad65c75..75c7897ac842 100644 --- a/pkgs/tools/misc/fd/default.nix +++ b/pkgs/tools/misc/fd/default.nix @@ -2,16 +2,16 @@ rustPlatform.buildRustPackage rec { name = "fd-${version}"; - version = "7.1.0"; + version = "7.2.0"; src = fetchFromGitHub { owner = "sharkdp"; repo = "fd"; rev = "v${version}"; - sha256 = "11x9zqhahgyf0icfnl8xzdb2mn35jrmvxmnz5xzh581mmhs355m2"; + sha256 = "1h7ar1m7w3vmakg9rp1nfmz7q5pqwvd8yyxwj335ixb49gph1zi5"; }; - cargoSha256 = "02r0lvfh37y1bij0fqmgyh8rywap714zvxrk0l108y8cqkq2ghnd"; + cargoSha256 = "0y6xp7fdjfmjfqf9avbq9bdvzvwkf3v1dv7a4k03w5279vxafzi4"; preFixup = '' mkdir -p "$out/man/man1" diff --git a/pkgs/tools/misc/graylog/plugins.nix b/pkgs/tools/misc/graylog/plugins.nix index 3f476cfea941..a692933053df 100644 --- a/pkgs/tools/misc/graylog/plugins.nix +++ b/pkgs/tools/misc/graylog/plugins.nix @@ -25,10 +25,10 @@ in { aggregates = glPlugin rec { name = "graylog-aggregates-${version}"; pluginName = "graylog-plugin-aggregates"; - version = "2.0.0"; + version = "2.3.0"; src = fetchurl { url = "https://github.com/cvtienhoven/${pluginName}/releases/download/${version}/${pluginName}-${version}.jar"; - sha256 = "0crgb49msjkvfpksbfhq2hlkc904j184wm1wp6q0x6lzhn07hm8y"; + sha256 = "0yy455wyr01ci3nqvbhzxs6r4bb3xgac0xcmqaim1wsm1fdfi2ws"; }; meta = { homepage = https://github.com/cvtienhoven/graylog-plugin-aggregates; @@ -38,10 +38,10 @@ in { auth_sso = glPlugin rec { name = "graylog-auth-sso-${version}"; pluginName = "graylog-plugin-auth-sso"; - version = "2.3.0"; + version = "2.4.2"; src = fetchurl { url = "https://github.com/Graylog2/${pluginName}/releases/download/${version}/${pluginName}-${version}.jar"; - sha256 = "110ag10y0xyf3za6663vf68r5rwdi92315a37vysqvj00y7yak0l"; + sha256 = "0nwzw7ddq2psnvj8jwaxp9i080l7y2daxy198wzb62m7i1srzcp8"; }; meta = { homepage = https://github.com/Graylog2/graylog-plugin-auth-sso; @@ -51,10 +51,10 @@ in { dnsresolver = glPlugin rec { name = "graylog-dnsresolver-${version}"; pluginName = "graylog-plugin-dnsresolver"; - version = "1.1.2"; + version = "1.2.0"; src = fetchurl { url = "https://github.com/graylog-labs/${pluginName}/releases/download/${version}/${pluginName}-${version}.jar"; - sha256 = "01s7wm6bwcpmdrl35gjp6rrqxixs2s9km2bdgzhv8pn25j5qnw28"; + sha256 = "0djlyd4w4mrrqfbrs20j1xw0fygqsb81snz437v9bf80avmcyzg1"; }; meta = { homepage = https://github.com/graylog-labs/graylog-plugin-dnsresolver; @@ -77,10 +77,10 @@ in { internal-logs = glPlugin rec { name = "graylog-internal-logs-${version}"; pluginName = "graylog-plugin-internal-logs"; - version = "2.3.0"; + version = "2.4.0"; src = fetchurl { url = "https://github.com/graylog-labs/${pluginName}/releases/download/${version}/${pluginName}-${version}.jar"; - sha256 = "05r4m2gf1hj1b889rmpb6b5a6q2xd0qkl1rpj107yd219j2grzf4"; + sha256 = "1jyy0wkjapv3xv5q957xxv2pcnd4n1yivkvkvg6cx7kv1ip75xwc"; }; meta = { homepage = https://github.com/graylog-labs/graylog-plugin-internal-logs; @@ -103,10 +103,10 @@ in { jabber = glPlugin rec { name = "graylog-jabber-${version}"; pluginName = "graylog-plugin-jabber"; - version = "2.0.0"; + version = "2.4.0"; src = fetchurl { url = "https://github.com/graylog-labs/${pluginName}/releases/download/${version}/${pluginName}-${version}.jar"; - sha256 = "1bqj5g9zjnw08bva7379c2ar3nhmyiilj7kjxd16qvfdn2674r5h"; + sha256 = "0zy27q8y0bv7i5nypsfxad4yiw121sbwzd194jsz2w08jhk3skl5"; }; meta = { homepage = https://github.com/graylog-labs/graylog-plugin-jabber; @@ -168,10 +168,10 @@ in { slack = glPlugin rec { name = "graylog-slack-${version}"; pluginName = "graylog-plugin-slack"; - version = "2.4.0"; + version = "3.1.0"; src = fetchurl { url = "https://github.com/graylog-labs/${pluginName}/releases/download/${version}/${pluginName}-${version}.jar"; - sha256 = "0v8ilfhs8bnx87pjxg1i3p2vxw61rwpg4k3zhga7slavx70y986p"; + sha256 = "067p8g94b007gypwyyi8vb6qhwdanpk8ah57abik54vv14jxg94k"; }; meta = { homepage = https://github.com/graylog-labs/graylog-plugin-slack; diff --git a/pkgs/tools/misc/hashit/default.nix b/pkgs/tools/misc/hashit/default.nix index 69d73aafff92..46e460db354f 100644 --- a/pkgs/tools/misc/hashit/default.nix +++ b/pkgs/tools/misc/hashit/default.nix @@ -1,8 +1,8 @@ -{ stdenv, fetchFromGitHub, meson, ninja, pkgconfig, cmake, vala, python3, gnome3, gtk3, granite, gobjectIntrospection, wrapGAppsHook }: +{ stdenv, fetchFromGitHub, meson, ninja, pkgconfig, cmake, vala_0_40, python3, gnome3, gtk3, granite, gobjectIntrospection, desktop-file-utils, wrapGAppsHook }: stdenv.mkDerivation rec { pname = "hashit"; - version = "0.2.0"; + version = "1.0.0"; name = "${pname}-${version}"; @@ -10,30 +10,37 @@ stdenv.mkDerivation rec { owner = "artemanufrij"; repo = pname; rev = version; - sha256 = "1d2g7cm7hhs354waidak9xkhhcvqlwnsl9d0bar9p82gfnpjdg7v"; + sha256 = "1ba38qmwdk7vkarsxqn89irbymzx52gbks4isx0klg880xm2z4dv"; }; nativeBuildInputs = [ + desktop-file-utils gobjectIntrospection meson ninja pkgconfig python3 - vala + vala_0_40 # should be `elementary.vala` when elementary attribute set is merged wrapGAppsHook ]; buildInputs = [ + gnome3.defaultIconTheme # should be `elementary.defaultIconTheme`when elementary attribute set is merged + gnome3.libgee granite gtk3 - gnome3.libgee ]; + postPatch = '' + chmod +x meson/post_install.py + patchShebangs meson/post_install.py + ''; + meta = with stdenv.lib; { description = "A simple app for checking usual checksums"; - homepage = https://github.com/artemanufrij/hashit; - license = licenses.gpl2Plus; + homepage = https://github.com/artemanufrij/hashit; + license = licenses.gpl2Plus; maintainers = with maintainers; [ worldofpeace ]; - platforms = platforms.linux; + platforms = platforms.linux; }; } diff --git a/pkgs/tools/misc/jdupes/default.nix b/pkgs/tools/misc/jdupes/default.nix index 991066690ee4..0df351bdd560 100644 --- a/pkgs/tools/misc/jdupes/default.nix +++ b/pkgs/tools/misc/jdupes/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "jdupes-${version}"; - version = "1.10.4"; + version = "1.11"; src = fetchFromGitHub { owner = "jbruchon"; repo = "jdupes"; rev = "v${version}"; - sha256 = "03a2jxv634xy5qwjrk784k3y3pd8f94pndf5m84yg2y7i8dvppnk"; + sha256 = "124n9vgnqqhnwgnms7dqmndp25xrcjaykxrzbi4v4as98kxxi3j1"; # Unicode file names lead to different checksums on HFS+ vs. other # filesystems because of unicode normalisation. The testdir # directories have such files and will be removed. diff --git a/pkgs/tools/misc/openopc/default.nix b/pkgs/tools/misc/openopc/default.nix deleted file mode 100644 index 8d3850745f11..000000000000 --- a/pkgs/tools/misc/openopc/default.nix +++ /dev/null @@ -1,48 +0,0 @@ -{ stdenv, fetchurl, python }: - -let - pythonEnv = python.withPackages(ps: [ps.Pyro]); -in stdenv.mkDerivation rec { - name = "openopc-${version}"; - version = "1.2.0"; - - src = fetchurl { - url = "mirror://sourceforge/project/openopc/openopc/${version}/OpenOPC-${version}.source.tar.bz2"; - sha256 = "0mm77fiipz5zy82l6pr3wk18bfril81milv2rdxr954c4gw5smyd"; - }; - - # There is no setup.py or any other "build system" file in the source archive. - installPhase = '' - mkdir -p "$out/bin" - mkdir -p "$out/share/doc/openopc" - mkdir -p "$out/${pythonEnv.python.sitePackages}" - mkdir -p "$out/libexec/opc" - - cp src/OpenOPC.py "$out/${pythonEnv.python.sitePackages}" - cp src/opc.py "$out/libexec/opc/" - - cat > "$out/bin/opc" << __EOF__ - #!${stdenv.shell} - export PYTHONPATH="$out/${pythonEnv.python.sitePackages}" - exec ${pythonEnv}/bin/${pythonEnv.python.executable} "$out/libexec/opc/opc.py" "\$@" - __EOF__ - chmod a+x "$out/bin/opc" - - cp -R *.txt doc/* "$out/share/doc/openopc/" - - # Copy these MS Windows tools, for reference. - cp src/OpenOPCService.py src/SystemHealth.py "$out/libexec/opc/" - ''; - - meta = with stdenv.lib; { - description = "OPC (OLE for Process Control) toolkit designed for use with Python"; - homepage = http://openopc.sourceforge.net/; - # """OpenOPC for Python is freely available under the terms of the GNU GPL. - # However, the OpenOPC library module is licensed under the "GPL + linking - # exception" license, which generally means that programs written using the - # OpenOPC library may be licensed under any terms.""" - license = licenses.gpl2; - platforms = platforms.linux; - maintainers = [ maintainers.bjornfor ]; - }; -} diff --git a/pkgs/tools/misc/powerline-rs/default.nix b/pkgs/tools/misc/powerline-rs/default.nix index 67f805988a3e..3de81d3bd052 100644 --- a/pkgs/tools/misc/powerline-rs/default.nix +++ b/pkgs/tools/misc/powerline-rs/default.nix @@ -1,25 +1,29 @@ -{ stdenv, lib, rustPlatform, fetchFromGitHub, pkgconfig, file, perl, curl, cmake, openssl, libssh2, libgit2, libzip, Security }: +{ stdenv, lib, rustPlatform, fetchFromGitLab, pkgconfig, file, perl, curl, cmake, openssl, libssh2, libgit2, libzip, Security }: rustPlatform.buildRustPackage rec { pname = "powerline-rs"; name = "${pname}-${version}"; - version = "0.1.8"; + version = "0.1.9"; - src = fetchFromGitHub { + src = fetchFromGitLab { owner = "jD91mZM2"; repo = "powerline-rs"; - rev = version; + #rev = version; - sha256 = "018i9qq98afbgv0nxs1n83zb09lqhqxpdrd95f2maic3rr5ngnj5"; + # Support for $COMPLETION_OUT: + rev = "44679385a95dd9f3ebd9b093f9ef8925610e9a23"; + + sha256 = "1mxkw6ydnqjyplbki2j9pbnlhxmkw9qqw54443a3cjmn2g08jyzp"; }; - cargoSha256 = "184s432a6damzvl0lv6jar1iml9dq60r190aqjy44lcg938981zc"; + cargoSha256 = "1sr9vbfk5bb3n0lv93y19in1clyvbj0w3p1gmp4sbw8lx84zwxhc"; nativeBuildInputs = [ pkgconfig file perl cmake curl ]; buildInputs = [ openssl libssh2 libgit2 libzip ] ++ lib.optional stdenv.isDarwin Security; + COMPLETION_OUT = "out"; postInstall = '' - install -Dm 755 "${pname}.bash" "$out/etc/bash_completion.d/${pname}" - install -Dm 755 "${pname}.fish" "$out/share/fish/vendor_completions.d/${pname}" + install -Dm 755 "${COMPLETION_OUT}/${pname}.bash" "$out/etc/bash_completion.d/${pname}" + install -Dm 755 "${COMPLETION_OUT}/${pname}.fish" "$out/share/fish/vendor_completions.d/${pname}" ''; meta = with lib; { diff --git a/pkgs/tools/misc/svtplay-dl/default.nix b/pkgs/tools/misc/svtplay-dl/default.nix index e29e799898c3..5502f2542f12 100644 --- a/pkgs/tools/misc/svtplay-dl/default.nix +++ b/pkgs/tools/misc/svtplay-dl/default.nix @@ -1,22 +1,22 @@ { stdenv, fetchFromGitHub, makeWrapper, python3Packages, perl, zip -, rtmpdump }: +, rtmpdump, gitMinimal }: let - inherit (python3Packages) python nose pycrypto requests mock; + inherit (python3Packages) python nose pycrypto pyyaml requests mock; in stdenv.mkDerivation rec { name = "svtplay-dl-${version}"; - version = "1.9.11"; + version = "2.1"; src = fetchFromGitHub { owner = "spaam"; repo = "svtplay-dl"; rev = version; - sha256 = "14p2362rzyblma9321z4zrcbzfs9m269ry6sz44ly0bv5fik7gdy"; + sha256 = "1cnc32gbhs955391hs1x1jpjsl3b6pqy7ysdydmp9q1i2rw105ln"; }; - pythonPaths = [ pycrypto requests ]; + pythonPaths = [ pycrypto pyyaml requests ]; buildInputs = [ python perl nose mock rtmpdump makeWrapper ] ++ pythonPaths; - nativeBuildInputs = [ zip ]; + nativeBuildInputs = [ gitMinimal zip ]; postPatch = '' substituteInPlace lib/svtplay_dl/fetcher/rtmp.py \ diff --git a/pkgs/tools/misc/tmux/default.nix b/pkgs/tools/misc/tmux/default.nix index 038b3206ac24..192c5eb0823b 100644 --- a/pkgs/tools/misc/tmux/default.nix +++ b/pkgs/tools/misc/tmux/default.nix @@ -20,8 +20,8 @@ stdenv.mkDerivation rec { src = fetchFromGitHub { owner = "tmux"; repo = "tmux"; - rev = version; - sha256 = "0n8sjddy00xgh1rvvw968hh72pyslg1gahmzajfc4b3xax87drpi"; + rev = "01918cb0170e07288d3aec624516e6470bf5b7fc"; + sha256 = "1fy87wvxn7r7jzqapvjisc1iizic3kxqk2lv83giqmw1y4g3s7rl"; }; postPatch = '' diff --git a/pkgs/tools/misc/youtube-dl/default.nix b/pkgs/tools/misc/youtube-dl/default.nix index 9de0f850d49b..8c08ee65805c 100644 --- a/pkgs/tools/misc/youtube-dl/default.nix +++ b/pkgs/tools/misc/youtube-dl/default.nix @@ -16,11 +16,14 @@ buildPythonPackage rec { pname = "youtube-dl"; - version = "2018.10.05"; + # The websites youtube-dl deals with are a very moving target. That means that + # downloads break constantly. Because of that, updates should always be backported + # to the latest stable release. + version = "2018.10.29"; src = fetchurl { url = "https://yt-dl.org/downloads/${version}/${pname}-${version}.tar.gz"; - sha256 = "1iq02kwxdgh07bf0w0fvbsjbdshs4kja35gy8m70ji9cj10l1mbw"; + sha256 = "1ndkkpnmjdyz5gjjmvaf18761lxa2c0kypicm9bpqpaj7sdr9s27"; }; nativeBuildInputs = [ makeWrapper ]; diff --git a/pkgs/tools/networking/eternal-terminal/default.nix b/pkgs/tools/networking/eternal-terminal/default.nix index 36bc2a9bc284..73eaa07ac8ff 100644 --- a/pkgs/tools/networking/eternal-terminal/default.nix +++ b/pkgs/tools/networking/eternal-terminal/default.nix @@ -2,13 +2,13 @@ stdenv.mkDerivation rec { name = "eternal-terminal-${version}"; - version = "5.1.7"; + version = "5.1.8"; src = fetchFromGitHub { owner = "MisterTea"; repo = "EternalTCP"; rev = "refs/tags/et-v${version}"; - sha256 = "17ndpkpyh8hwr6v7ac6029sja95nhn9c1g8r93g20rp0vz3r6lpa"; + sha256 = "0fq9a1fn0c77wfpypl3z7y23gbkw295ksy97wi9lhb5zj2m3dkq0"; }; nativeBuildInputs = [ cmake ninja ]; @@ -17,7 +17,7 @@ stdenv.mkDerivation rec { meta = with stdenv.lib; { description = "Remote shell that automatically reconnects without interrupting the session"; license = licenses.asl20; - homepage = https://mistertea.github.io/EternalTCP/; + homepage = https://mistertea.github.io/EternalTerminal/; platforms = platforms.linux ++ platforms.darwin; maintainers = [ maintainers.dezgeg ]; }; diff --git a/pkgs/tools/networking/getmail/default.nix b/pkgs/tools/networking/getmail/default.nix index ac69fd992658..56b7320a1b26 100644 --- a/pkgs/tools/networking/getmail/default.nix +++ b/pkgs/tools/networking/getmail/default.nix @@ -1,13 +1,12 @@ { stdenv, fetchurl, python2Packages }: python2Packages.buildPythonApplication rec { - version = "5.6"; - name = "getmail-${version}"; - namePrefix = ""; + pname = "getmail"; + version = "5.7"; src = fetchurl { - url = "http://pyropus.ca/software/getmail/old-versions/${name}.tar.gz"; - sha256 = "16nmvj80szr6yvcxxgmxn2lxqpjqqj4xg5a0b66zhvck6j42q3a6"; + url = "http://pyropus.ca/software/getmail/old-versions/${pname}-${version}.tar.gz"; + sha256 = "1ygv78ihjyrh60657bl8pc17a5dqawdkfh32h8hrd4kwwxlsd5r4"; }; doCheck = false; diff --git a/pkgs/tools/networking/i2pd/default.nix b/pkgs/tools/networking/i2pd/default.nix index 9ecf69637872..7ab77b2d2ee7 100644 --- a/pkgs/tools/networking/i2pd/default.nix +++ b/pkgs/tools/networking/i2pd/default.nix @@ -11,13 +11,13 @@ stdenv.mkDerivation rec { name = pname + "-" + version; pname = "i2pd"; - version = "2.21.0"; + version = "2.21.1"; src = fetchFromGitHub { owner = "PurpleI2P"; repo = pname; rev = version; - sha256 = "02zsig63cambwm479ckw4kl1dk00g1q2sbzsvn9vy1xpjy928n7v"; + sha256 = "0j892s9ga9fjc2q1rw3hp5il4mw1jc0aiw60y1rfaiflyv0wd696"; }; buildInputs = with stdenv.lib; [ boost zlib openssl ] diff --git a/pkgs/tools/networking/ip2unix/default.nix b/pkgs/tools/networking/ip2unix/default.nix new file mode 100644 index 000000000000..14f8599f7e97 --- /dev/null +++ b/pkgs/tools/networking/ip2unix/default.nix @@ -0,0 +1,32 @@ +{ stdenv, fetchFromGitHub, meson, ninja, pkgconfig, libyamlcpp, systemd +, asciidoctor, python3Packages +}: + +stdenv.mkDerivation rec { + name = "ip2unix-${version}"; + version = "1.0.0"; + + src = fetchFromGitHub { + owner = "nixcloud"; + repo = "ip2unix"; + rev = "v${version}"; + sha256 = "1s6gyrrzgifr6gagcw4vx9xznxvdl14y14r0d1xc72j69b00zc4q"; + }; + + nativeBuildInputs = [ + meson ninja pkgconfig asciidoctor + python3Packages.pytest python3Packages.pytest-timeout + ]; + + buildInputs = [ libyamlcpp systemd ]; + + doCheck = true; + + meta = { + homepage = https://github.com/nixcloud/ip2unix; + description = "Turn IP sockets into Unix domain sockets"; + platforms = stdenv.lib.platforms.linux; + license = stdenv.lib.licenses.lgpl3; + maintainers = [ stdenv.lib.maintainers.aszlig ]; + }; +} diff --git a/pkgs/tools/networking/ntp/seccomp.patch b/pkgs/tools/networking/ntp/seccomp.patch index 872bf8e7fcc2..c75536dac7fb 100644 --- a/pkgs/tools/networking/ntp/seccomp.patch +++ b/pkgs/tools/networking/ntp/seccomp.patch @@ -1,7 +1,18 @@ -diff -urN ntp-4.2.8p10.orig/ntpd/ntpd.c ntp-4.2.8p10/ntpd/ntpd.c ---- ntp-4.2.8p10.orig/ntpd/ntpd.c 2017-04-02 20:21:17.371319663 +0200 -+++ ntp-4.2.8p10/ntpd/ntpd.c 2017-04-02 21:26:02.766178723 +0200 -@@ -1157,10 +1157,12 @@ +From 881e427f3236046466bdb8235edf86e6dfa34391 Mon Sep 17 00:00:00 2001 +From: Michael Bishop <cleverca22@gmail.com> +Date: Mon, 11 Jun 2018 08:30:48 -0300 +Subject: [PATCH] fix the seccomp filter to include a few previously missed + syscalls + +--- + ntpd/ntpd.c | 8 ++++++++ + 1 file changed, 8 insertions(+) + +diff --git a/ntpd/ntpd.c b/ntpd/ntpd.c +index 2c7f02ec5..4c59dc2ba 100644 +--- a/ntpd/ntpd.c ++++ b/ntpd/ntpd.c +@@ -1140,10 +1140,12 @@ int scmp_sc[] = { SCMP_SYS(close), SCMP_SYS(connect), SCMP_SYS(exit_group), @@ -14,15 +25,16 @@ diff -urN ntp-4.2.8p10.orig/ntpd/ntpd.c ntp-4.2.8p10/ntpd/ntpd.c SCMP_SYS(getsockname), SCMP_SYS(ioctl), SCMP_SYS(lseek), -@@ -1179,6 +1181,7 @@ +@@ -1162,6 +1164,8 @@ int scmp_sc[] = { SCMP_SYS(sendto), SCMP_SYS(setitimer), SCMP_SYS(setsid), -+ SCMP_SYS(setsockopt), ++ SCMP_SYS(setsockopt), ++ SCMP_SYS(openat), SCMP_SYS(socket), SCMP_SYS(stat), SCMP_SYS(time), -@@ -1195,9 +1198,11 @@ +@@ -1178,9 +1182,11 @@ int scmp_sc[] = { SCMP_SYS(clock_settime), SCMP_SYS(close), SCMP_SYS(exit_group), @@ -34,12 +46,12 @@ diff -urN ntp-4.2.8p10.orig/ntpd/ntpd.c ntp-4.2.8p10/ntpd/ntpd.c SCMP_SYS(madvise), SCMP_SYS(mmap), SCMP_SYS(mmap2), -@@ -1211,6 +1216,8 @@ +@@ -1194,6 +1200,8 @@ int scmp_sc[] = { SCMP_SYS(select), SCMP_SYS(setitimer), SCMP_SYS(setsid), -+ SCMP_SYS(setsockopt), -+ SCMP_SYS(openat), ++ SCMP_SYS(setsockopt), ++ SCMP_SYS(openat), SCMP_SYS(sigprocmask), SCMP_SYS(sigreturn), SCMP_SYS(socketcall), diff --git a/pkgs/tools/nix/nixdoc/default.nix b/pkgs/tools/nix/nixdoc/default.nix new file mode 100644 index 000000000000..d84a85071df7 --- /dev/null +++ b/pkgs/tools/nix/nixdoc/default.nix @@ -0,0 +1,25 @@ +{ stdenv, callPackage, fetchFromGitHub, rustPlatform, darwin }: + +rustPlatform.buildRustPackage rec { + name = "nixdoc-${version}"; + version = "1.0.1"; + + src = fetchFromGitHub { + owner = "tazjin"; + repo = "nixdoc"; + rev = "v${version}"; + sha256 = "14d4dq06jdqazxvv7fq5872zy0capxyb0fdkp8qg06gxl1iw201s"; + }; + + buildInputs = stdenv.lib.optional stdenv.isDarwin [ darwin.Security ]; + + cargoSha256 = "1bfn1x1jhpyidai4cjwip5r1ibkqp26ivmqq3vjm71l00m6avb94"; + + meta = with stdenv.lib; { + description = "Generate documentation for Nix functions"; + homepage = https://github.com/tazjin/nixdoc; + license = [ licenses.gpl3 ]; + maintainers = [ maintainers.tazjin ]; + platforms = platforms.unix; + }; +} diff --git a/pkgs/tools/package-management/cargo-tree/default.nix b/pkgs/tools/package-management/cargo-tree/default.nix index 90f2ad71fc21..dd7d88ff848c 100644 --- a/pkgs/tools/package-management/cargo-tree/default.nix +++ b/pkgs/tools/package-management/cargo-tree/default.nix @@ -1,17 +1,17 @@ { stdenv, lib, rustPlatform, fetchFromGitHub, pkgconfig, cmake, curl, libiconv, darwin }: rustPlatform.buildRustPackage rec { name = "cargo-tree-${version}"; - version = "0.20.0"; + version = "0.21.0"; src = fetchFromGitHub { owner = "sfackler"; repo = "cargo-tree"; rev = "v${version}"; - sha256 = "197kbr7q7aqzv5l8xilz60m50rbkmfwfswyd6ka7w83j5bi88jw3"; + sha256 = "0vr1mv8ns67kslxgwkvic8w86fvmqasxs6yd4yn21j49zg23866k"; }; - cargoSha256 = "1v84cj42ch49jrigrkivg99hzxa79jii8s3fddjk23hi1xx1c35y"; + cargoSha256 = "0924bpcwz15zlp4vjaqap05s4nynw9mqz0np1kph3vx7aj9rsaw6"; nativeBuildInputs = [ pkgconfig cmake ]; buildInputs = [ curl ] ++ lib.optionals stdenv.isDarwin [ libiconv darwin.apple_sdk.frameworks.Security ]; diff --git a/pkgs/tools/package-management/nix-du/default.nix b/pkgs/tools/package-management/nix-du/default.nix index 24672296506d..59ec714261b1 100644 --- a/pkgs/tools/package-management/nix-du/default.nix +++ b/pkgs/tools/package-management/nix-du/default.nix @@ -1,25 +1,23 @@ -{ stdenv, fetchFromGitHub, rustPlatform, nix, boost, graphviz }: +{ stdenv, fetchFromGitHub, rustPlatform, nix, boost, graphviz, darwin }: rustPlatform.buildRustPackage rec { name = "nix-du-${version}"; - version = "0.2.0"; + version = "0.3.0"; src = fetchFromGitHub { owner = "symphorien"; repo = "nix-du"; rev = "v${version}"; - sha256 = "1n1qgqjbwbb59xnzgz0dn8h8pckh6yq3crh0w6x2sngijwh678x8"; + sha256 = "1x6qpivxbn94034jfdxb97xi97fhcdv2z7llq2ccfc80mgd0gz8l"; }; - cargoSha256 = "1qidbrkdpf4kliyvy2040qi3a67s8mr2r46rjcblr1v2gar0xgs0"; + cargoSha256 = "0sva4lnhccm6ly7pa6m99s3fqkmh1dzv7r2727nsg2f55prd4kxc"; - # switch to true when nix includes https://github.com/NixOS/nix/pull/2223 and - # https://github.com/NixOS/nix/pull/2234 - doCheck = false; + doCheck = true; checkInputs = [ graphviz ]; buildInputs = [ boost nix - ]; + ] ++ stdenv.lib.optional stdenv.isDarwin darwin.apple_sdk.frameworks.Security; meta = with stdenv.lib; { description = "A tool to determine which gc-roots take space in your nix store"; diff --git a/pkgs/tools/package-management/nix/default.nix b/pkgs/tools/package-management/nix/default.nix index 030571d6a911..ea03570bb3e5 100644 --- a/pkgs/tools/package-management/nix/default.nix +++ b/pkgs/tools/package-management/nix/default.nix @@ -160,12 +160,12 @@ in rec { nixUnstable = (lib.lowPrio (common rec { name = "nix-2.2${suffix}"; - suffix = "pre6520_18b4c53f"; + suffix = "pre6526_9f99d624"; src = fetchFromGitHub { owner = "NixOS"; repo = "nix"; - rev = "18b4c53f71dfc626f5f5ffa0282afd1b9faad6a4"; - sha256 = "1hn7bjrf6x7024nald7nk1c9m8fyddkzhazl7pwf6ssmiv12apxh"; + rev = "9f99d62480cf7c58c0a110b180f2096b7d25adab"; + sha256 = "0fkmx7gmgg0yij9kw52fkyvib88hj1jsj90vbpy13ccfwknh1044"; }; fromGit = true; })) // { perl-bindings = perl-bindings { diff --git a/pkgs/tools/security/pinentry/mac.nix b/pkgs/tools/security/pinentry/mac.nix index 4acdd6cb897e..8168aa94b3d2 100644 --- a/pkgs/tools/security/pinentry/mac.nix +++ b/pkgs/tools/security/pinentry/mac.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchFromGitHub, xcbuildHook, libiconv, Cocoa, ncurses }: +{ stdenv, fetchFromGitHub, xcbuildHook, libiconv, Cocoa, ncurses, cf-private }: stdenv.mkDerivation rec { name = "pinentry-mac-0.9.4"; @@ -11,7 +11,12 @@ stdenv.mkDerivation rec { }; nativeBuildInputs = [ xcbuildHook ]; - buildInputs = [ libiconv Cocoa ncurses ]; + + buildInputs = [ + libiconv Cocoa ncurses + # Needed for OBJC_CLASS_$_NSArray symbols. + cf-private + ]; installPhase = '' mkdir -p $out/Applications diff --git a/pkgs/tools/security/saml2aws/default.nix b/pkgs/tools/security/saml2aws/default.nix index 047706cd8a68..e90517f1581b 100644 --- a/pkgs/tools/security/saml2aws/default.nix +++ b/pkgs/tools/security/saml2aws/default.nix @@ -2,7 +2,7 @@ buildGoPackage rec { name = "saml2aws-${version}"; - version = "2.6.1"; + version = "2.10.0"; goPackagePath = "github.com/versent/saml2aws"; goDeps = ./deps.nix; @@ -15,7 +15,7 @@ buildGoPackage rec { rev = "v${version}"; owner = "Versent"; repo = "saml2aws"; - sha256 = "0sg5qm1gyrisna247lmxfgpa22y6rnz9vd6yg92kxlcwr4ji8l1j"; + sha256 = "00m8x57fgry601w5f9dxnxdqbbqjiv7c0rsx47iv9qsp0w7l50c5"; }; meta = with stdenv.lib; { diff --git a/pkgs/tools/security/tor/default.nix b/pkgs/tools/security/tor/default.nix index d7344884951c..d43b8598c18b 100644 --- a/pkgs/tools/security/tor/default.nix +++ b/pkgs/tools/security/tor/default.nix @@ -14,11 +14,11 @@ }: stdenv.mkDerivation rec { - name = "tor-0.3.4.8"; + name = "tor-0.3.4.9"; src = fetchurl { url = "https://dist.torproject.org/${name}.tar.gz"; - sha256 = "08qhzcmzxp5xr2l5721vagksqnnbrzzzy5hmz5y9r8lrq2r4qsl2"; + sha256 = "0jhnvnp08hsfrzgsvg5xnfxyaw3nzgg9h24cwbwnz6iby20i05qs"; }; outputs = [ "out" "geoip" ]; diff --git a/pkgs/tools/typesetting/scdoc/default.nix b/pkgs/tools/typesetting/scdoc/default.nix index 5789f51abd9c..a5bf2d261e1c 100644 --- a/pkgs/tools/typesetting/scdoc/default.nix +++ b/pkgs/tools/typesetting/scdoc/default.nix @@ -9,6 +9,8 @@ stdenv.mkDerivation rec { sha256 = "0a9sxifzsbj24kjnpc0525i91ni2vkwizhgvwx1m9shvfkiisnc6"; }; + patches = [ ./use-source-date-epoch.patch ]; + postPatch = '' substituteInPlace Makefile \ --replace "-static" "" \ diff --git a/pkgs/tools/typesetting/scdoc/use-source-date-epoch.patch b/pkgs/tools/typesetting/scdoc/use-source-date-epoch.patch new file mode 100644 index 000000000000..5a2496d63583 --- /dev/null +++ b/pkgs/tools/typesetting/scdoc/use-source-date-epoch.patch @@ -0,0 +1,75 @@ +diff --git a/src/main.c b/src/main.c +index 14b08d2..e2cc33e 100644 +--- a/src/main.c ++++ b/src/main.c +@@ -3,6 +3,7 @@ + #include <stdbool.h> + #include <stdio.h> + #include <stdlib.h> ++#define __USE_XOPEN + #include <time.h> + #include <unistd.h> + #include "string.h" +@@ -66,10 +67,17 @@ static void parse_preamble(struct parser *p) { + int section = -1; + uint32_t ch; + char date[256]; +- time_t now; +- time(&now); +- struct tm *now_tm = localtime(&now); +- strftime(date, sizeof(date), "%F", now_tm); ++ char *source_date_epoch = getenv("SOURCE_DATE_EPOCH"); ++ if (source_date_epoch != NULL) { ++ struct tm source_date_epoch_tm; ++ strptime(source_date_epoch, "%s", &source_date_epoch_tm); ++ strftime(date, sizeof(date), "%F", &source_date_epoch_tm); ++ } else { ++ time_t now; ++ time(&now); ++ struct tm *now_tm = localtime(&now); ++ strftime(date, sizeof(date), "%F", now_tm); ++ } + while ((ch = parser_getch(p)) != UTF8_INVALID) { + if ((ch < 0x80 && isalnum(ch)) || ch == '_' || ch == '-' || ch == '.') { + assert(str_append_ch(name, ch) != -1); +diff --git a/test/preamble b/test/preamble +index 03e2d0c..eeb734b 100755 +--- a/test/preamble ++++ b/test/preamble +@@ -38,31 +38,31 @@ EOF + end 0 + + begin "Writes the appropriate header" +-scdoc <<EOF | grep '^\.TH "test" "8" "'"$(date +'%F')"'"' >/dev/null ++scdoc <<EOF | grep '^\.TH "test" "8" "'"$(date +'%F' --date=@${SOURCE_DATE_EPOCH:-$(date +'%s')})"'"' >/dev/null + test(8) + EOF + end 0 + + begin "Preserves dashes" +-scdoc <<EOF | grep '^\.TH "test-manual" "8" "'"$(date +'%F')"'"' >/dev/null ++scdoc <<EOF | grep '^\.TH "test-manual" "8" "'"$(date +'%F' --date=@${SOURCE_DATE_EPOCH:-$(date +'%s')})"'"' >/dev/null + test-manual(8) + EOF + end 0 + + begin "Handles extra footer field" +-scdoc <<EOF | grep '^\.TH "test-manual" "8" "'"$(date +'%F')"'" "Footer"' >/dev/null ++scdoc <<EOF | grep '^\.TH "test-manual" "8" "'"$(date +'%F' --date=@${SOURCE_DATE_EPOCH:-$(date +'%s')})"'" "Footer"' >/dev/null + test-manual(8) "Footer" + EOF + end 0 + + begin "Handles both extra fields" +-scdoc <<EOF | grep '^\.TH "test-manual" "8" "'"$(date +'%F')"'" "Footer" "Header"' >/dev/null ++scdoc <<EOF | grep '^\.TH "test-manual" "8" "'"$(date +'%F' --date=@${SOURCE_DATE_EPOCH:-$(date +'%s')})"'" "Footer" "Header"' >/dev/null + test-manual(8) "Footer" "Header" + EOF + end 0 + + begin "Emits empty footer correctly" +-scdoc <<EOF | grep '^\.TH "test-manual" "8" "'"$(date +'%F')"'" "" "Header"' >/dev/null ++scdoc <<EOF | grep '^\.TH "test-manual" "8" "'"$(date +'%F' --date=@${SOURCE_DATE_EPOCH:-$(date +'%s')})"'" "" "Header"' >/dev/null + test-manual(8) "" "Header" + EOF + end 0 diff --git a/pkgs/tools/typesetting/tex/texlive/combine.nix b/pkgs/tools/typesetting/tex/texlive/combine.nix index f76b71ced3cf..ea2926748198 100644 --- a/pkgs/tools/typesetting/tex/texlive/combine.nix +++ b/pkgs/tools/typesetting/tex/texlive/combine.nix @@ -218,9 +218,30 @@ in buildEnv { ln -sv "$(realpath $s)" "$out/bin/$tName" # wrapped below done ) + '' + + # A hacky way to provide repstopdf + # * Copy is done to have a correct "$0" so that epstopdf enables the restricted mode + # * ./bin/repstopdf needs to be a symlink to be processed by wrapBin + '' + if [[ -e ./bin/epstopdf ]]; then + cp $(realpath ./bin/epstopdf) ./share/texmf/scripts/repstopdf + ln -s "$out"/share/texmf/scripts/repstopdf ./bin/repstopdf + fi + '' + + # finish up the wrappers + '' rm "$out"/bin/*-sys wrapBin '' + + # Perform a small test to verify that the restricted mode get enabled when + # needed (detected by checking if it disallows --gscmd) + '' + if [[ -e ./bin/epstopdf ]]; then + echo "Testing restricted mode for {,r}epstopdf" + ! (epstopdf --gscmd echo /dev/null 2>&1 || true) | grep forbidden + (repstopdf --gscmd echo /dev/null 2>&1 || true) | grep forbidden + fi + '' + # TODO: a context trigger https://www.preining.info/blog/2015/06/debian-tex-live-2015-the-new-layout/ # http://wiki.contextgarden.net/ConTeXt_Standalone#Unix-like_platforms_.28Linux.2FMacOS_X.2FFreeBSD.2FSolaris.29 diff --git a/pkgs/tools/video/atomicparsley/default.nix b/pkgs/tools/video/atomicparsley/default.nix index 701850758bcb..74f4c562102c 100644 --- a/pkgs/tools/video/atomicparsley/default.nix +++ b/pkgs/tools/video/atomicparsley/default.nix @@ -1,4 +1,4 @@ -{ stdenv, fetchhg, autoreconfHook, zlib, darwin }: +{ stdenv, fetchhg, autoreconfHook, zlib, cf-private, Cocoa }: stdenv.mkDerivation rec { name = "atomicparsley-${version}"; @@ -9,10 +9,14 @@ stdenv.mkDerivation rec { sha256 = "05n4kbn91ps52h3wi1qb2jwygjsc01qzx4lgkv5mvwl5i49rj8fm"; }; - buildInputs = - [ autoreconfHook - zlib - ] ++ stdenv.lib.optional stdenv.isDarwin darwin.apple_sdk.frameworks.Cocoa; + nativeBuildInputs = [ autoreconfHook ]; + + buildInputs = [ zlib ] + ++ stdenv.lib.optionals stdenv.isDarwin [ + Cocoa + # Needed for OBJC_CLASS_$_NSDictionary symbols. + cf-private + ]; installPhase = "install -D AtomicParsley $out/bin/AtomicParsley"; diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix index 444028d2db0d..8f5e866ede54 100644 --- a/pkgs/top-level/aliases.nix +++ b/pkgs/top-level/aliases.nix @@ -224,7 +224,13 @@ mapAliases ({ pidginwindowmerge = pidgin-window-merge; # added 2018-01-08 piwik = matomo; # added 2018-01-16 pltScheme = racket; # just to be sure + pmtools = acpica-tools; # added 2018-11-01 poppler_qt5 = libsForQt5.poppler; # added 2015-12-19 + postgresql93 = postgresql_9_3; + postgresql94 = postgresql_9_4; + postgresql95 = postgresql_9_5; + postgresql96 = postgresql_9_6; + postgresql100 = throw "deprecated 2018-10-21: use postgresql_10 instead"; procps-ng = procps; # added 2018-06-08 prometheus-statsd-bridge = prometheus-statsd-exporter; # added 2017-08-27 pulseaudioLight = pulseaudio; # added 2018-04-25 @@ -301,6 +307,7 @@ mapAliases ({ trang = jing-trang; # added 2018-04-25 transmission_gtk = transmission-gtk; # added 2018-01-06 transmission_remote_gtk = transmission-remote-gtk; # added 2018-01-06 + truecrypt = veracrypt; # added 2018-10-24 tshark = wireshark-cli; # added 2018-04-25 ucsFonts = ucs-fonts; # added 2016-07-15 ultrastardx-beta = ultrastardx; # added 2017-08-12 diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index fed01028d37b..9e9ee8797ff1 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -142,6 +142,8 @@ with pkgs; inherit dhall-nix; }; + deadcode = callPackage ../development/tools/deadcode { }; + diffPlugins = (callPackage ../build-support/plugins.nix {}).diffPlugins; dieHook = makeSetupHook {} ../build-support/setup-hooks/die.sh; @@ -591,12 +593,17 @@ with pkgs; gsl = gsl_1; }; - atomicparsley = callPackage ../tools/video/atomicparsley { }; + atomicparsley = callPackage ../tools/video/atomicparsley { + inherit (darwin) cf-private; + inherit (darwin.apple_sdk.frameworks) Cocoa; + }; autoflake = callPackage ../development/tools/analysis/autoflake { }; avfs = callPackage ../tools/filesystems/avfs { }; + avldrums-lv2 = callPackage ../applications/audio/avldrums-lv2 { }; + aws-iam-authenticator = callPackage ../tools/security/aws-iam-authenticator {}; awscli = callPackage ../tools/admin/awscli { }; @@ -675,6 +682,8 @@ with pkgs; cconv = callPackage ../tools/text/cconv { }; + go-check = callPackage ../development/tools/check { }; + chkcrontab = callPackage ../tools/admin/chkcrontab { }; cozy = callPackage ../applications/audio/cozy-audiobooks { }; @@ -790,6 +799,7 @@ with pkgs; androidenv = callPackage ../development/mobile/androidenv { pkgs_i686 = pkgsi686Linux; + licenseAccepted = (config.android_sdk.accept_license or false); }; inherit (androidenv) androidndk; @@ -818,6 +828,8 @@ with pkgs; }; aria = aria2; + asmfmt = callPackage ../development/tools/asmfmt { }; + aspcud = callPackage ../tools/misc/aspcud { }; at = callPackage ../tools/system/at { }; @@ -850,7 +862,10 @@ with pkgs; libssl = openssl; }; - axoloti = callPackage ../applications/audio/axoloti { }; + axoloti = callPackage ../applications/audio/axoloti { + gcc-arm-embedded = pkgsCross.arm-embedded.buildPackages.gcc; + binutils-arm-embedded = pkgsCross.arm-embedded.buildPackages.binutils; + }; dfu-util-axoloti = callPackage ../applications/audio/axoloti/dfu-util.nix { }; libusb1-axoloti = callPackage ../applications/audio/axoloti/libusb1.nix { inherit (darwin) libobjc; @@ -1046,10 +1061,10 @@ with pkgs; cue2pops = callPackage ../tools/cd-dvd/cue2pops { }; - cabal2nix = haskell.lib.overrideCabal haskellPackages.cabal2nix (drv: { + cabal2nix = haskell.lib.overrideCabal (haskell.lib.addOptparseApplicativeCompletionScripts "cabal2nix" haskellPackages.cabal2nix) (drv: { isLibrary = false; enableSharedExecutables = false; - executableToolDepends = [ makeWrapper ]; + executableToolDepends = (drv.executableToolDepends or []) ++ [ makeWrapper ]; postInstall = '' exe=$out/libexec/${drv.pname}-${drv.version}/${drv.pname} install -D $out/bin/${drv.pname} $exe @@ -1057,11 +1072,7 @@ with pkgs; makeWrapper $exe $out/bin/${drv.pname} \ --prefix PATH ":" "${nix}/bin" \ --prefix PATH ":" "${nix-prefetch-scripts}/bin" - mkdir -p $out/share/{bash-completion/completions,zsh/vendor-completions,fish/completions} - $exe --bash-completion-script $exe >$out/share/bash-completion/completions/${drv.pname} - $exe --zsh-completion-script $exe >$out/share/zsh/vendor-completions/_${drv.pname} - $exe --fish-completion-script $exe >$out/share/fish/completions/${drv.pname}.fish - ''; + '' + (drv.postInstall or ""); }); stack2nix = with haskell.lib; overrideCabal (justStaticExecutables haskellPackages.stack2nix) (drv: { @@ -1154,8 +1165,6 @@ with pkgs; consul = callPackage ../servers/consul { }; - consul-ui = callPackage ../servers/consul/ui.nix { }; - consul-alerts = callPackage ../servers/monitoring/consul-alerts { }; consul-template = callPackage ../tools/system/consul-template { }; @@ -1187,6 +1196,7 @@ with pkgs; codec2 = callPackage ../development/libraries/codec2 { }; contacts = callPackage ../tools/misc/contacts { + inherit (darwin) cf-private; inherit (darwin.apple_sdk.frameworks) Foundation AddressBook; }; @@ -1196,6 +1206,8 @@ with pkgs; coursier = callPackage ../development/tools/coursier {}; + cppclean = callPackage ../development/tools/cppclean {}; + cri-tools = callPackage ../tools/virtualization/cri-tools {}; crip = callPackage ../applications/audio/crip { }; @@ -1327,6 +1339,8 @@ with pkgs; envsubst = callPackage ../tools/misc/envsubst { }; + errcheck = callPackage ../development/tools/errcheck { }; + eschalot = callPackage ../tools/security/eschalot { }; esptool = callPackage ../tools/misc/esptool { }; @@ -1549,6 +1563,8 @@ with pkgs; patdiff = callPackage ../tools/misc/patdiff { }; + pbpst = callPackage ../applications/misc/pbpst { }; + pbzx = callPackage ../tools/compression/pbzx { }; pev = callPackage ../development/tools/analysis/pev { }; @@ -2078,8 +2094,12 @@ with pkgs; cudatoolkit_7 cudatoolkit_7_5 cudatoolkit_8 + cudatoolkit_9 cudatoolkit_9_0 - cudatoolkit_9; + cudatoolkit_9_1 + cudatoolkit_9_2 + cudatoolkit_10 + cudatoolkit_10_0; cudatoolkit = cudatoolkit_9; @@ -2089,7 +2109,11 @@ with pkgs; cudnn6_cudatoolkit_8 cudnn_cudatoolkit_8 cudnn_cudatoolkit_9 - cudnn_cudatoolkit_9_0; + cudnn_cudatoolkit_9_0 + cudnn_cudatoolkit_9_1 + cudnn_cudatoolkit_9_2 + cudnn_cudatoolkit_10 + cudnn_cudatoolkit_10_0; cudnn = cudnn_cudatoolkit_9; @@ -2355,6 +2379,8 @@ with pkgs; easyrsa2 = callPackage ../tools/networking/easyrsa/2.x.nix { }; + easysnap = callPackage ../tools/backup/easysnap { }; + ebook_tools = callPackage ../tools/text/ebook-tools { }; ecryptfs = callPackage ../tools/security/ecryptfs { }; @@ -3302,6 +3328,8 @@ with pkgs; hwinfo = callPackage ../tools/system/hwinfo { }; + hybridreverb2 = callPackage ../applications/audio/hybridreverb2 { }; + hylafaxplus = callPackage ../servers/hylafaxplus { }; i2c-tools = callPackage ../os-specific/linux/i2c-tools { }; @@ -3413,6 +3441,8 @@ with pkgs; ip2location = callPackage ../tools/networking/ip2location { }; + ip2unix = callPackage ../tools/networking/ip2unix { }; + ipad_charge = callPackage ../tools/misc/ipad_charge { }; iperf2 = callPackage ../tools/networking/iperf/2.nix { }; @@ -4171,6 +4201,8 @@ with pkgs; modemmanager = callPackage ../tools/networking/modem-manager {}; + modem-manager-gui = callPackage ../applications/networking/modem-manager-gui {}; + modsecurity_standalone = callPackage ../tools/security/modsecurity { }; molly-guard = callPackage ../os-specific/linux/molly-guard { }; @@ -4388,6 +4420,8 @@ with pkgs; nms = callPackage ../tools/misc/nms { }; + nomachine-client = callPackage ../tools/admin/nomachine-client { }; + notify-desktop = callPackage ../tools/misc/notify-desktop {}; nkf = callPackage ../tools/text/nkf {}; @@ -4522,8 +4556,6 @@ with pkgs; openobex = callPackage ../tools/bluetooth/openobex { }; - openopc = callPackage ../tools/misc/openopc { }; - openresolv = callPackage ../tools/networking/openresolv { }; opensc = callPackage ../tools/security/opensc { @@ -4563,7 +4595,7 @@ with pkgs; opae = callPackage ../development/libraries/opae { }; - opentracing-cpp = callPackages ../development/libraries/opentracing-cpp { }; + opentracing-cpp = callPackage ../development/libraries/opentracing-cpp { }; openvswitch = callPackage ../os-specific/linux/openvswitch { }; @@ -4780,6 +4812,7 @@ with pkgs; }; pinentry_mac = callPackage ../tools/security/pinentry/mac.nix { + inherit (darwin) cf-private; inherit (darwin.apple_sdk.frameworks) Cocoa; }; @@ -4965,10 +4998,6 @@ with pkgs; esteidfirefoxplugin = callPackage ../applications/networking/browsers/mozilla-plugins/esteidfirefoxplugin { }; - qgifer = callPackage ../applications/video/qgifer { - giflib = giflib_4_1; - }; - qhull = callPackage ../development/libraries/qhull { }; qjoypad = callPackage ../tools/misc/qjoypad { }; @@ -5091,6 +5120,8 @@ with pkgs; recoverjpeg = callPackage ../tools/misc/recoverjpeg { }; + reftools = callPackage ../development/tools/reftools { }; + reposurgeon = callPackage ../applications/version-management/reposurgeon { }; reptyr = callPackage ../os-specific/linux/reptyr {}; @@ -6050,11 +6081,6 @@ with pkgs; libpng = libpng12; }; - truecrypt = callPackage ../applications/misc/truecrypt { - stdenv = overrideInStdenv stdenv [ useOldCXXAbi ]; - wxGUI = config.truecrypt.wxGUI or true; - }; - ttmkfdir = callPackage ../tools/misc/ttmkfdir { }; ttwatch = callPackage ../tools/misc/ttwatch { }; @@ -6159,7 +6185,7 @@ with pkgs; }; veracrypt = callPackage ../applications/misc/veracrypt { - wxGUI = true; + wxGTK = wxGTK30; }; vlan = callPackage ../tools/networking/vlan { }; @@ -6209,6 +6235,8 @@ with pkgs; wol = callPackage ../tools/networking/wol { }; + wolf-shaper = callPackage ../applications/audio/wolf-shaper { }; + wring = nodePackages.wring; wrk = callPackage ../tools/networking/wrk { }; @@ -6451,6 +6479,23 @@ with pkgs; abcl = callPackage ../development/compilers/abcl {}; + adoptopenjdk-bin-11-packages-linux = import ../development/compilers/adoptopenjdk-bin/jdk11-linux.nix; + adoptopenjdk-bin-11-packages-darwin = import ../development/compilers/adoptopenjdk-bin/jdk11-darwin.nix; + + adoptopenjdk-hotspot-bin-11 = if stdenv.isLinux + then callPackage adoptopenjdk-bin-11-packages-linux.jdk-hotspot {} + else callPackage adoptopenjdk-bin-11-packages-darwin.jdk-hotspot {}; + adoptopenjdk-jre-hotspot-bin-11 = if stdenv.isLinux + then callPackage adoptopenjdk-bin-11-packages-linux.jre-hotspot {} + else callPackage adoptopenjdk-bin-11-packages-darwin.jre-hotspot {}; + + # no OpenJ9 for Darwin + adoptopenjdk-openj9-bin-11 = callPackage adoptopenjdk-bin-11-packages-linux.jdk-openj9 {}; + adoptopenjdk-jre-openj9-bin-11 = callPackage adoptopenjdk-bin-11-packages-linux.jre-openj9 {}; + + adoptopenjdk-bin = adoptopenjdk-hotspot-bin-11; + adoptopenjdk-jre-bin = adoptopenjdk-jre-hotspot-bin-11; + aldor = callPackage ../development/compilers/aldor { }; aliceml = callPackage ../development/compilers/aliceml { }; @@ -6841,36 +6886,6 @@ with pkgs; gcl_2_6_13_pre = callPackage ../development/compilers/gcl/2.6.13-pre.nix { }; - gcc-arm-embedded-4_7 = pkgsi686Linux.callPackage ../development/compilers/gcc-arm-embedded { - version = "4.7-2013q3-20130916"; - releaseType = "update"; - sha256 = "1bd9bi9q80xn2rpy0rn1vvj70rh15kb7dmah0qs4q2rv78fqj40d"; - ncurses = pkgsi686Linux.ncurses5; - }; - gcc-arm-embedded-4_8 = pkgsi686Linux.callPackage ../development/compilers/gcc-arm-embedded { - version = "4.8-2014q1-20140314"; - releaseType = "update"; - sha256 = "ce92859550819d4a3d1a6e2672ea64882b30afa2c08cf67fa8e1d93788c2c577"; - ncurses = pkgsi686Linux.ncurses5; - }; - gcc-arm-embedded-4_9 = pkgsi686Linux.callPackage ../development/compilers/gcc-arm-embedded { - version = "4.9-2015q1-20150306"; - releaseType = "update"; - sha256 = "c5e0025b065750bbd76b5357b4fc8606d88afbac9ff55b8a82927b4b96178154"; - ncurses = pkgsi686Linux.ncurses5; - }; - gcc-arm-embedded-5 = pkgs.pkgsi686Linux.callPackage ../development/compilers/gcc-arm-embedded { - dirName = "5.0"; - subdirName = "5-2016-q2-update"; - version = "5.4-2016q2-20160622"; - releaseType = "update"; - sha256 = "1r0rqbnw7rf94f5bsa3gi8bick4xb7qnp1dkvdjfbvqjvysvc44r"; - ncurses = pkgsi686Linux.ncurses5; - }; - gcc-arm-embedded-6 = callPackage ../development/compilers/gcc-arm-embedded/6 {}; - gcc-arm-embedded-7 = callPackage ../development/compilers/gcc-arm-embedded/7 {}; - gcc-arm-embedded = gcc-arm-embedded-7; - gforth = callPackage ../development/compilers/gforth {}; gtk-server = callPackage ../development/interpreters/gtk-server {}; @@ -6879,7 +6894,7 @@ with pkgs; haskell = callPackage ./haskell-packages.nix { }; - haskellPackages = haskell.packages.ghc843.override { + haskellPackages = haskell.packages.ghc844.override { overrides = config.haskellPackageOverrides or haskell.packageOverrides; }; @@ -6959,6 +6974,10 @@ with pkgs; go-junit-report = callPackage ../development/tools/go-junit-report { }; + gogetdoc = callPackage ../development/tools/gogetdoc { }; + + gometalinter = callPackage ../development/tools/gometalinter { }; + gox = callPackage ../development/tools/gox { }; gprolog = callPackage ../development/compilers/gprolog { }; @@ -7000,11 +7019,11 @@ with pkgs; inherit (gnome2) GConf gnome_vfs; }; - openjdk10 = + openjdk11 = if stdenv.isDarwin then - callPackage ../development/compilers/openjdk/darwin/10.nix { } + callPackage ../development/compilers/openjdk/darwin/11.nix { } else - callPackage ../development/compilers/openjdk/10.nix { + callPackage ../development/compilers/openjdk/11.nix { inherit (gnome2) GConf gnome_vfs; }; @@ -7024,17 +7043,14 @@ with pkgs; (lib.addMetaAttrs { outputsToInstall = [ "jre" ]; } ((openjdk8.override { minimal = true; }).jre // { outputs = [ "jre" ]; })); - jdk10 = openjdk10 // { outputs = [ "out" ]; }; - jre10 = lib.setName "openjre-${lib.getVersion pkgs.openjdk10.jre}" - (lib.addMetaAttrs { outputsToInstall = [ "jre" ]; } - (openjdk10.jre // { outputs = [ "jre" ]; })); - jre10_headless = + jdk11 = openjdk11 // { outputs = [ "out" ]; }; + jdk11_headless = if stdenv.isDarwin then - jre10 + jdk11 else - lib.setName "openjre-${lib.getVersion pkgs.openjdk10.jre}-headless" - (lib.addMetaAttrs { outputsToInstall = [ "jre" ]; } - ((openjdk10.override { minimal = true; }).jre // { outputs = [ "jre" ]; })); + lib.setName "openjdk-${lib.getVersion pkgs.openjdk11}-headless" + (lib.addMetaAttrs {} + ((openjdk11.override { minimal = true; }) // {})); jdk = jdk8; jre = jre8; @@ -7052,18 +7068,12 @@ with pkgs; oraclejdk8psu = pkgs.oraclejdk8psu_distro true false; - oraclejdk10 = pkgs.oraclejdk10distro "JDK" false; - oraclejre = lowPrio (pkgs.jdkdistro false false); oraclejre8 = lowPrio (pkgs.oraclejdk8distro false false); oraclejre8psu = lowPrio (pkgs.oraclejdk8psu_distro false false); - oraclejre10 = lowPrio (pkgs.oraclejdk10distro "JRE" false); - - oracleserverjre10 = lowPrio (pkgs.oraclejdk10distro "ServerJRE" false); - jrePlugin = jre8Plugin; jre8Plugin = lowPrio (pkgs.oraclejdk8distro false true); @@ -7078,9 +7088,6 @@ with pkgs; (if pluginSupport then appendToName "with-plugin" else x: x) (callPackage ../development/compilers/oraclejdk/jdk8psu-linux.nix { inherit installjdk pluginSupport; }); - oraclejdk10distro = packageType: _: - (callPackage ../development/compilers/oraclejdk/jdk10-linux.nix { inherit packageType; }); - javacard-devkit = pkgsi686Linux.callPackage ../development/compilers/javacard-devkit { }; jikes = callPackage ../development/compilers/jikes { }; @@ -7210,10 +7217,6 @@ with pkgs; manticore = callPackage ../development/compilers/manticore { }; - mentorToolchains = recurseIntoAttrs ( - pkgsi686Linux.callPackage ../development/compilers/mentor {} - ); - mercury = callPackage ../development/compilers/mercury { }; microscheme = callPackage ../development/compilers/microscheme { }; @@ -7246,16 +7249,6 @@ with pkgs; mono5 = mono58; mono4 = mono48; - mono40 = lowPrio (callPackage ../development/compilers/mono/4.0.nix { - inherit (darwin) libobjc; - inherit (darwin.apple_sdk.frameworks) Foundation; - }); - - mono44 = lowPrio (callPackage ../development/compilers/mono/4.4.nix { - inherit (darwin) libobjc; - inherit (darwin.apple_sdk.frameworks) Foundation; - }); - mono46 = lowPrio (callPackage ../development/compilers/mono/4.6.nix { inherit (darwin) libobjc; inherit (darwin.apple_sdk.frameworks) Foundation; @@ -7399,9 +7392,12 @@ with pkgs; cargo-tree = callPackage ../tools/package-management/cargo-tree { }; cargo-update = callPackage ../tools/package-management/cargo-update { }; - cargo-asm = callPackage ../development/tools/rust/cargo-asm { }; + cargo-asm = callPackage ../development/tools/rust/cargo-asm { + inherit (darwin.apple_sdk.frameworks) Security; + }; cargo-fuzz = callPackage ../development/tools/rust/cargo-fuzz { }; + pyo3-pack = callPackage ../development/tools/rust/pyo3-pack { }; rainicorn = callPackage ../development/tools/rust/rainicorn { }; rustfmt = callPackage ../development/tools/rust/rustfmt { }; rustracer = callPackage ../development/tools/rust/racer { }; @@ -7590,6 +7586,8 @@ with pkgs; dhall-text = haskell.lib.justStaticExecutables haskellPackages.dhall-text; + dhallPackages = import ../development/dhall-modules { inherit pkgs; }; + duktape = callPackage ../development/interpreters/duktape { }; beam = callPackage ./beam-packages.nix { }; @@ -7813,7 +7811,6 @@ with pkgs; python2Full = python2.override{x11Support=true;}; python27Full = python27.override{x11Support=true;}; python3Full = python3.override{x11Support=true;}; - python34Full = python34.override{x11Support=true;}; python35Full = python35.override{x11Support=true;}; python36Full = python36.override{x11Support=true;}; python37Full = python37.override{x11Support=true;}; @@ -7827,10 +7824,6 @@ with pkgs; self = python27; inherit (darwin) CF configd; }; - python34 = callPackage ../development/interpreters/python/cpython/3.4 { - inherit (darwin) CF configd; - self = python34; - }; python35 = callPackage ../development/interpreters/python/cpython/3.5 { inherit (darwin) CF configd; self = python35; @@ -7852,7 +7845,6 @@ with pkgs; # Python package sets. python27Packages = lib.hiPrioSet (recurseIntoAttrs python27.pkgs); - python34Packages = python34.pkgs; python35Packages = python35.pkgs; python36Packages = recurseIntoAttrs python36.pkgs; python37Packages = python37.pkgs; @@ -8006,17 +7998,17 @@ with pkgs; amtk = callPackage ../development/libraries/amtk { }; - avrgcclibc = throw "avrgcclibs are now separate packages, install avrbinutils, avrgcc and avrlibc"; - - avrbinutils = callPackage ../development/misc/avr/binutils {}; - - avrgcc = callPackage ../development/misc/avr/gcc {}; - - avrlibc = callPackage ../development/misc/avr/libc {}; + avrlibc = callPackage ../development/misc/avr/libc {}; + avrlibcCross = callPackage ../development/misc/avr/libc { + stdenv = crossLibcStdenv; + }; avr8burnomat = callPackage ../development/misc/avr8-burn-omat { }; - betaflight = callPackage ../development/misc/stm32/betaflight { }; + betaflight = callPackage ../development/misc/stm32/betaflight { + gcc-arm-embedded = pkgsCross.arm-embedded.buildPackages.gcc; + binutils-arm-embedded = pkgsCross.arm-embedded.buildPackages.binutils; + }; sourceFromHead = callPackage ../build-support/source-from-head-fun.nix {}; @@ -8024,6 +8016,8 @@ with pkgs; jython = callPackage ../development/interpreters/jython {}; + gImageReader = callPackage ../applications/misc/gImageReader { }; + guile-cairo = callPackage ../development/guile-modules/guile-cairo { }; guile-fibers = callPackage ../development/guile-modules/guile-fibers { }; @@ -8052,7 +8046,10 @@ with pkgs; guile = guile_2_0; }; - inav = callPackage ../development/misc/stm32/inav { }; + inav = callPackage ../development/misc/stm32/inav { + gcc-arm-embedded = pkgsCross.arm-embedded.buildPackages.gcc; + binutils-arm-embedded = pkgsCross.arm-embedded.buildPackages.binutils; + }; pharo-vms = callPackage ../development/pharo/vm { }; pharo = pharo-vms.multi-vm-wrapper; @@ -8095,6 +8092,7 @@ with pkgs; ansible_2_4 ansible_2_5 ansible_2_6 + ansible_2_7 ansible2 ansible; @@ -8167,10 +8165,10 @@ with pkgs; inherit (darwin) cctools; inherit (darwin.apple_sdk.frameworks) CoreFoundation CoreServices Foundation; }; - bazel_jdk10 = callPackage ../development/tools/build-managers/bazel { + bazel_jdk11 = callPackage ../development/tools/build-managers/bazel { inherit (darwin) cctools; inherit (darwin.apple_sdk.frameworks) CoreFoundation CoreServices Foundation; - runJdk = jdk10; + runJdk = jdk11; }; bazel-buildtools = callPackage ../development/tools/build-managers/bazel/buildtools { }; @@ -8210,6 +8208,8 @@ with pkgs; blackmagic = callPackage ../development/tools/misc/blackmagic { stdenv = overrideCC stdenv gcc6; + gcc-arm-embedded = pkgsCross.arm-embedded.buildPackages.gcc; + binutils-arm-embedded = pkgsCross.arm-embedded.buildPackages.binutils; }; bloaty = callPackage ../development/tools/bloaty { }; @@ -9004,10 +9004,6 @@ with pkgs; qcachegrind = libsForQt5.callPackage ../development/tools/analysis/qcachegrind {}; - verasco = ocaml-ng.ocamlPackages_4_02.verasco.override { - coq = coq_8_4; - }; - visualvm = callPackage ../development/tools/java/visualvm { }; vultr = callPackage ../development/tools/vultr { }; @@ -9589,6 +9585,8 @@ with pkgs; frog = self.languageMachines.frog; + fstrcmp = callPackage ../development/libraries/fstrcmp { }; + fstrm = callPackage ../development/libraries/fstrm { }; cfitsio = callPackage ../development/libraries/cfitsio { }; @@ -9759,11 +9757,13 @@ with pkgs; # libc is hackily often used from the previous stage. This `or` # hack fixes the hack, *sigh*. /**/ if name == "glibc" then targetPackages.glibcCross or glibcCross - else if name == "bionic" then targetPackages.bionic - else if name == "uclibc" then targetPackages.uclibcCross + else if name == "bionic" then targetPackages.bionic or bionic + else if name == "uclibc" then targetPackages.uclibcCross or uclibcCross + else if name == "avrlibc" then targetPackages.avrlibcCross or avrlibcCross + else if name == "newlib" then targetPackages.newlibCross or newlibCross else if name == "musl" then targetPackages.muslCross or muslCross else if name == "msvcrt" then targetPackages.windows.mingw_w64 or windows.mingw_w64 - else if stdenv.targetPlatform.useiOSPrebuilt then targetPackages.darwin.iosSdkPkgs.libraries + else if stdenv.targetPlatform.useiOSPrebuilt then targetPackages.darwin.iosSdkPkgs.libraries or darwin.iosSdkPkgs.libraries else if name == "libSystem" then targetPackages.darwin.xcode else throw "Unknown libc"; @@ -10166,6 +10166,8 @@ with pkgs; imlibsetroot = callPackage ../applications/graphics/imlibsetroot { libXinerama = xorg.libXinerama; } ; + ineffassign = callPackage ../development/tools/ineffassign { }; + ijs = callPackage ../development/libraries/ijs { }; incrtcl = callPackage ../development/libraries/incrtcl { }; @@ -11643,6 +11645,7 @@ with pkgs; opensaml-cpp = callPackage ../development/libraries/opensaml-cpp { }; openscenegraph = callPackage ../development/libraries/openscenegraph { }; + openscenegraph_3_4 = callPackage ../development/libraries/openscenegraph/3.4.0.nix { }; openslp = callPackage ../development/libraries/openslp {}; @@ -11731,7 +11734,9 @@ with pkgs; pgroonga = callPackage ../servers/sql/postgresql/pgroonga {}; plv8 = callPackage ../servers/sql/postgresql/plv8 { - v8 = v8_6_x; + v8 = callPackage ../development/libraries/v8/plv8_6_x.nix { + inherit (python2Packages) python; + }; }; phonon = callPackage ../development/libraries/phonon {}; @@ -12159,10 +12164,7 @@ with pkgs; schroedinger = callPackage ../development/libraries/schroedinger { }; SDL = callPackage ../development/libraries/SDL { - openglSupport = libGLSupported; - alsaSupport = stdenv.isLinux; - x11Support = !stdenv.isCygwin; - pulseaudioSupport = config.pulseaudio or stdenv.isLinux; + inherit (darwin) cf-private; inherit (darwin.apple_sdk.frameworks) OpenGL CoreAudio CoreServices AudioUnit Kernel Cocoa; }; @@ -12183,12 +12185,7 @@ with pkgs; SDL_ttf = callPackage ../development/libraries/SDL_ttf { }; SDL2 = callPackage ../development/libraries/SDL2 { - openglSupport = libGLSupported; - alsaSupport = stdenv.isLinux; - x11Support = !stdenv.isCygwin; - waylandSupport = stdenv.isLinux; - udevSupport = stdenv.isLinux; - pulseaudioSupport = config.pulseaudio or stdenv.isLinux; + inherit (darwin) cf-private; inherit (darwin.apple_sdk.frameworks) AudioUnit Cocoa CoreAudio CoreServices ForceFeedback OpenGL; }; @@ -12222,9 +12219,13 @@ with pkgs; graphite2 = callPackage ../development/libraries/silgraphite/graphite2.nix {}; - simavr = callPackage ../development/tools/simavr { }; + simavr = callPackage ../development/tools/simavr { + avrgcc = pkgsCross.avr.buildPackages.gcc; + avrbinutils = pkgsCross.avr.buildPackages.binutils; + avrlibc = pkgsCross.avr.libcCross; + }; - simgear = callPackage ../development/libraries/simgear { }; + simgear = callPackage ../development/libraries/simgear { openscenegraph = openscenegraph_3_4; }; simp_le = callPackage ../tools/admin/simp_le { }; @@ -12552,6 +12553,8 @@ with pkgs; vala = vala_0_40; }; + unconvert = callPackage ../development/tools/unconvert { }; + unibilium = callPackage ../development/libraries/unibilium { }; unicap = callPackage ../development/libraries/unicap {}; @@ -13223,6 +13226,8 @@ with pkgs; dex-oidc = callPackage ../servers/dex { }; + doh-proxy = callPackage ../servers/dns/doh-proxy { }; + dgraph = callPackage ../servers/dgraph { }; dico = callPackage ../servers/dico { }; @@ -13560,6 +13565,8 @@ with pkgs; mysql_jdbc = callPackage ../servers/sql/mysql/jdbc { }; + miniflux = callPackage ../servers/miniflux { }; + nagios = callPackage ../servers/monitoring/nagios { }; munin = callPackage ../servers/monitoring/munin { }; @@ -13613,22 +13620,25 @@ with pkgs; pgbouncer = callPackage ../servers/sql/pgbouncer { }; - pgpool93 = pgpool.override { postgresql = postgresql93; }; - pgpool94 = pgpool.override { postgresql = postgresql94; }; + pgpool93 = pgpool.override { postgresql = postgresql_9_3; }; + pgpool94 = pgpool.override { postgresql = postgresql_9_4; }; pgpool = callPackage ../servers/sql/pgpool { pam = if stdenv.isLinux then pam else null; libmemcached = null; # Detection is broken upstream }; - postgresql = postgresql96; + timescaledb-parallel-copy = callPackage ../development/tools/database/timescaledb-parallel-copy { }; + + postgresql = postgresql_9_6; inherit (callPackages ../servers/sql/postgresql { }) - postgresql93 - postgresql94 - postgresql95 - postgresql96 - postgresql100; + postgresql_9_3 + postgresql_9_4 + postgresql_9_5 + postgresql_9_6 + postgresql_10 + postgresql_11; postgresql_jdbc = callPackage ../servers/sql/postgresql/jdbc { }; @@ -13873,10 +13883,14 @@ with pkgs; xqilla = callPackage ../development/tools/xqilla { }; - xquartz = callPackage ../servers/x11/xquartz { }; + xquartz = callPackage ../servers/x11/xquartz { + inherit (darwin) cf-private; + }; + quartz-wm = callPackage ../servers/x11/quartz-wm { stdenv = clangStdenv; - inherit (darwin.apple_sdk.frameworks) AppKit; + inherit (darwin) cf-private; + inherit (darwin.apple_sdk.frameworks) AppKit Foundation; inherit (darwin.apple_sdk.libs) Xplugin; }; @@ -13885,7 +13899,9 @@ with pkgs; # have created a cycle. xorg = recurseIntoAttrs ((lib.callPackageWith __splicedPackages ../servers/x11/xorg { }).overrideScope' (lib.callPackageWith __splicedPackages ../servers/x11/xorg/overrides.nix { - inherit (darwin) apple_sdk; + inherit (darwin) cf-private; + inherit (darwin.apple_sdk.frameworks) ApplicationServices Carbon Cocoa; + inherit (darwin.apple_sdk.libs) Xplugin; bootstrap_cmds = if stdenv.isDarwin then darwin.bootstrap_cmds else null; python = python2; # Incompatible with Python 3x udev = if stdenv.isLinux then udev else null; @@ -14047,6 +14063,8 @@ with pkgs; drbd = callPackage ../os-specific/linux/drbd { }; + dropwatch = callPackage ../os-specific/linux/dropwatch { }; + dstat = callPackage ../os-specific/linux/dstat { }; # unstable until the first 1.x release @@ -14231,14 +14249,6 @@ with pkgs; klibcShrunk = lowPrio (callPackage ../os-specific/linux/klibc/shrunk.nix { }); - linux_beagleboard = callPackage ../os-specific/linux/kernel/linux-beagleboard.nix { - kernelPatches = - [ kernelPatches.bridge_stp_helper - kernelPatches.cpu-cgroup-v2."4.11" - kernelPatches.modinst_arg_list_too_long - ]; - }; - linux_mptcp = linux_mptcp_94; linux_mptcp_94 = callPackage ../os-specific/linux/kernel/linux-mptcp.nix { kernelPatches = @@ -14301,11 +14311,6 @@ with pkgs; # when adding a new linux version kernelPatches.cpu-cgroup-v2."4.11" kernelPatches.modinst_arg_list_too_long - # https://github.com/NixOS/nixpkgs/issues/42755 - # Remove these xen-netfront patches once they're included in - # upstream! Fixes https://github.com/NixOS/nixpkgs/issues/42755 - kernelPatches.xen-netfront_fix_mismatched_rtnl_unlock - kernelPatches.xen-netfront_update_features_after_registering_netdev ]; }; @@ -14343,24 +14348,6 @@ with pkgs; ]; }; - linux_riscv = callPackage ../os-specific/linux/kernel/linux-riscv.nix { - kernelPatches = [ - kernelPatches.bridge_stp_helper - kernelPatches.modinst_arg_list_too_long - ]; - }; - - linux_samus_4_12 = callPackage ../os-specific/linux/kernel/linux-samus-4.12.nix { - kernelPatches = - [ kernelPatches.bridge_stp_helper - kernelPatches.p9_fixes - # See pkgs/os-specific/linux/kernel/cpu-cgroup-v2-patches/README.md - # when adding a new linux version - kernelPatches.cpu-cgroup-v2."4.11" - kernelPatches.modinst_arg_list_too_long - ]; - }; - linux_hardkernel_4_14 = callPackage ../os-specific/linux/kernel/linux-hardkernel-4.14.nix { kernelPatches = [ kernelPatches.bridge_stp_helper @@ -14393,6 +14380,8 @@ with pkgs; python = python3; }; + bpftrace = callPackage ../os-specific/linux/bpftrace { }; + bbswitch = callPackage ../os-specific/linux/bbswitch {}; beegfs-module = callPackage ../os-specific/linux/beegfs/kernel-module.nix { }; @@ -14527,7 +14516,6 @@ with pkgs; linux_latest = linuxPackages_latest.kernel; # Build the kernel modules for the some of the kernels. - linuxPackages_beagleboard = linuxPackagesFor pkgs.linux_beagleboard; linuxPackages_mptcp = linuxPackagesFor pkgs.linux_mptcp; linuxPackages_rpi = linuxPackagesFor pkgs.linux_rpi; linuxPackages_4_4 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_4_4); @@ -14587,11 +14575,6 @@ with pkgs; linuxPackages_latest_xen_dom0_hardened = recurseIntoAttrs (hardenedLinuxPackagesFor (pkgs.linux_latest.override { features.xen_dom0=true; })); - # Samus kernels - linuxPackages_samus_4_12 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_samus_4_12); - linuxPackages_samus_latest = linuxPackages_samus_4_12; - linux_samus_latest = linuxPackages_samus_latest.kernel; - # Hardkernel (Odroid) kernels. linuxPackages_hardkernel_4_14 = recurseIntoAttrs (linuxPackagesFor pkgs.linux_hardkernel_4_14); linuxPackages_hardkernel_latest = linuxPackages_hardkernel_4_14; @@ -14720,19 +14703,24 @@ with pkgs; easyjson = callPackage ../development/tools/easyjson { }; + iferr = callPackage ../development/tools/iferr { }; + go-bindata = callPackage ../development/tools/go-bindata { }; go-bindata-assetfs = callPackage ../development/tools/go-bindata-assetfs { }; go-protobuf = callPackage ../development/tools/go-protobuf { }; - go-symbols = callPackage ../development/tools/go-symbols { }; go-outline = callPackage ../development/tools/go-outline { }; gocode = callPackage ../development/tools/gocode { }; + gocode-gomod = callPackage ../development/tools/gocode-gomod { }; + + goconst = callPackage ../development/tools/goconst { }; + goconvey = callPackage ../development/tools/goconvey { }; gotags = callPackage ../development/tools/gotags { }; @@ -14741,14 +14729,20 @@ with pkgs; golangci-lint = callPackage ../development/tools/golangci-lint { }; + gocyclo = callPackage ../development/tools/gocyclo { }; + godef = callPackage ../development/tools/godef { }; gopkgs = callPackage ../development/tools/gopkgs { }; + gosec = callPackage ../development/tools/gosec { }; + govers = callPackage ../development/tools/govers { }; govendor = callPackage ../development/tools/govendor { }; + go-tools = callPackage ../development/tools/go-tools { }; + gotools = callPackage ../development/tools/gotools { }; gotop = callPackage ../tools/system/gotop { }; @@ -14761,6 +14755,8 @@ with pkgs; gotests = callPackage ../development/tools/gotests { }; + impl = callPackage ../development/tools/impl { }; + quicktemplate = callPackage ../development/tools/quicktemplate { }; gogoclient = callPackage ../os-specific/linux/gogoclient { }; @@ -14828,8 +14824,6 @@ with pkgs; pmutils = callPackage ../os-specific/linux/pm-utils { }; - pmtools = callPackage ../os-specific/linux/pmtools { }; - policycoreutils = callPackage ../os-specific/linux/policycoreutils { }; semodule-utils = callPackage ../os-specific/linux/semodule-utils { }; @@ -15526,6 +15520,10 @@ with pkgs; hasklig = callPackage ../data/fonts/hasklig {}; + interfacer = callPackage ../development/tools/interfacer { }; + + maligned = callPackage ../development/tools/maligned { }; + inter-ui = callPackage ../data/fonts/inter-ui { }; siji = callPackage ../data/fonts/siji { }; @@ -16019,13 +16017,18 @@ with pkgs; bookworm = callPackage ../applications/office/bookworm { }; - chromium = callPackage ../applications/networking/browsers/chromium { + chromium = callPackage ../applications/networking/browsers/chromium ({ channel = "stable"; pulseSupport = config.pulseaudio or true; enablePepperFlash = config.chromium.enablePepperFlash or false; enableWideVine = config.chromium.enableWideVine or false; - gnome = gnome2; - }; + } // (if stdenv.isAarch64 then { + stdenv = gcc8Stdenv; + } else { + llvmPackages = llvmPackages_7; + stdenv = llvmPackages_7.stdenv; + }) + ); chronos = callPackage ../applications/networking/cluster/chronos { }; @@ -16069,6 +16072,8 @@ with pkgs; pulseaudioSupport = config.pulseaudio or false; }; + cmusfm = callPackage ../applications/audio/cmusfm { }; + cni = callPackage ../applications/networking/cluster/cni {}; cni-plugins = callPackage ../applications/networking/cluster/cni/plugins.nix {}; @@ -16303,7 +16308,7 @@ with pkgs; eaglemode = callPackage ../applications/misc/eaglemode { }; eclipses = recurseIntoAttrs (callPackage ../applications/editors/eclipse { - jdk = jdk10; + jdk = jdk11; }); ecs-agent = callPackage ../applications/virtualization/ecs-agent { }; @@ -16339,6 +16344,7 @@ with pkgs; imagemagick = null; acl = null; gpm = null; + inherit (darwin) cf-private; inherit (darwin.apple_sdk.frameworks) AppKit GSS ImageIO; }; @@ -17186,6 +17192,8 @@ with pkgs; gxmessage = callPackage ../applications/misc/gxmessage { }; + gxplugins-lv2 = callPackage ../applications/audio/gxplugins-lv2 { }; + hackrf = callPackage ../applications/misc/hackrf { }; hakuneko = callPackage ../tools/misc/hakuneko { }; @@ -17259,6 +17267,8 @@ with pkgs; slack-cli = callPackage ../tools/networking/slack-cli { }; + slack-term = callPackage ../applications/networking/instant-messengers/slack-term { }; + singularity = callPackage ../applications/virtualization/singularity { }; spectmorph = callPackage ../applications/audio/spectmorph { }; @@ -17488,6 +17498,8 @@ with pkgs; jwm = callPackage ../applications/window-managers/jwm { }; + jwm-settings-manager = callPackage ../applications/window-managers/jwm/jwm-settings-manager.nix { }; + k3d = callPackage ../applications/graphics/k3d { inherit (pkgs.gnome2) gtkglext; stdenv = overrideCC stdenv gcc6; @@ -18310,7 +18322,10 @@ with pkgs; opentimestamps-client = python3Packages.callPackage ../tools/misc/opentimestamps-client {}; - opentx = callPackage ../applications/misc/opentx { }; + opentx = callPackage ../applications/misc/opentx { + gcc-arm-embedded = pkgsCross.arm-embedded.buildPackages.gcc; + binutils-arm-embedded = pkgsCross.arm-embedded.buildPackages.binutils; + }; opera = callPackage ../applications/networking/browsers/opera {}; @@ -18770,6 +18785,10 @@ with pkgs; rstudio = libsForQt5.callPackage ../applications/editors/rstudio { boost = boost166; }; + rstudio-preview = libsForQt5.callPackage ../applications/editors/rstudio/preview.nix { + boost = boost166; + llvmPackages = llvmPackages_7; + }; rsync = callPackage ../applications/networking/sync/rsync { enableACLs = !(stdenv.isDarwin || stdenv.isSunOS || stdenv.isFreeBSD); @@ -19053,6 +19072,8 @@ with pkgs; apiKey = config.libspotify.apiKey or null; }; + sourcetrail = callPackage ../development/tools/sourcetrail { }; + spotifywm = callPackage ../applications/audio/spotifywm { }; squeezelite = callPackage ../applications/audio/squeezelite { }; @@ -19173,6 +19194,8 @@ with pkgs; taskjuggler = callPackage ../applications/misc/taskjuggler { }; + tabula = callPackage ../applications/misc/tabula { }; + tasknc = callPackage ../applications/misc/tasknc { }; taskwarrior = callPackage ../applications/misc/taskwarrior { }; @@ -19394,6 +19417,7 @@ with pkgs; }; vim = callPackage ../applications/editors/vim { + inherit (darwin) cf-private; inherit (darwin.apple_sdk.frameworks) Carbon Cocoa; }; @@ -19752,6 +19776,8 @@ with pkgs; gtk = gtk2; }; + x11basic = callPackage ../development/compilers/x11basic { }; + x11vnc = callPackage ../tools/X11/x11vnc { }; x2goclient = libsForQt5.callPackage ../applications/networking/remote/x2goclient { }; @@ -20251,7 +20277,7 @@ with pkgs; fish-fillets-ng = callPackage ../games/fish-fillets-ng {}; - flightgear = libsForQt5.callPackage ../games/flightgear { }; + flightgear = libsForQt5.callPackage ../games/flightgear { openscenegraph = openscenegraph_3_4; }; flock = callPackage ../development/tools/flock { }; @@ -20693,6 +20719,7 @@ with pkgs; # Torcs wants to make shared libraries linked with plib libraries (it provides static). # i686 is the only platform I know than can do that linking without plib built with -fPIC libpng = libpng12; + openscenegraph = openscenegraph_3_4; }; torcs = callPackage ../games/torcs { }; @@ -21358,9 +21385,7 @@ with pkgs; abella = callPackage ../applications/science/logic/abella {}; - acgtk = callPackage ../applications/science/logic/acgtk { - ocamlPackages = ocaml-ng.ocamlPackages_4_05; - }; + acgtk = callPackage ../applications/science/logic/acgtk {}; alt-ergo = callPackage ../applications/science/logic/alt-ergo {}; @@ -21371,13 +21396,14 @@ with pkgs; boogie = dotnetPackages.Boogie; inherit (callPackage ./coq-packages.nix { - inherit (ocaml-ng) ocamlPackages_4_02 - ocamlPackages_4_05 - ; + inherit (ocaml-ng) ocamlPackages_4_05; }) mkCoqPackages - coq_8_4 coq_8_5 coq_8_6 coq_8_7 coq_8_8 - coqPackages_8_5 coqPackages_8_6 coqPackages_8_7 coqPackages_8_8 - coqPackages coq + coqPackages_8_5 coq_8_5 + coqPackages_8_6 coq_8_6 + coqPackages_8_7 coq_8_7 + coqPackages_8_8 coq_8_8 + coqPackages_8_9 coq_8_9 + coqPackages coq ; coq2html = callPackage ../applications/science/logic/coq2html { @@ -21989,14 +22015,9 @@ with pkgs; gnome-breeze = callPackage ../misc/themes/gnome-breeze { }; gnuk = callPackage ../misc/gnuk { - gcc-arm-embedded = gcc-arm-embedded-4_9; + gcc-arm-embedded = pkgsCross.arm-embedded.buildPackages.gcc; + binutils-arm-embedded = pkgsCross.arm-embedded.buildPackages.binutils; }; - gnuk-unstable = lowPrio (callPackage ../misc/gnuk/unstable.nix { - gcc-arm-embedded = gcc-arm-embedded-4_9; - }); - gnuk-git = lowPrio (callPackage ../misc/gnuk/git.nix { - gcc-arm-embedded = gcc-arm-embedded-4_9; - }); greybird = callPackage ../misc/themes/greybird { }; @@ -22106,38 +22127,56 @@ with pkgs; nixops-dns = callPackage ../tools/package-management/nixops/nixops-dns.nix { }; - /* - * Evaluate a NixOS configuration using this evaluation of Nixpkgs. - * - * With this function you can write, for example, a package that - * depends on a custom virtual machine image. - * - * Parameter: A module, path or list of those that represent the - * configuration of the NixOS system to be constructed. - * - * Result: An attribute set containing packages produced by this - * evaluation of NixOS, such as toplevel, kernel and - * initialRamdisk. - * The result can be extended in the modules by defining - * extra options in system.build. - * - * Unlike in plain NixOS, the nixpkgs.config, nixpkgs.overlays and - * nixpkgs.system options will be ignored by default. Instead, - * nixpkgs.pkgs will have the default value of pkgs as it was - * constructed right after invoking the nixpkgs function (e.g. the - * value of import <nixpkgs> { overlays = [./my-overlay.nix]; } - * but not the value of (import <nixpkgs> {} // { extra = ...; }). - * - * If you do want to use the config.nixpkgs options, you are - * probably better off by calling nixos/lib/eval-config.nix - * directly, even though it is possible to set config.nixpkgs.pkgs. - * - * For more information about writing NixOS modules, see - * https://nixos.org/nixos/manual/index.html#sec-writing-modules - * - * Note that you will need to have called Nixpkgs with the system - * parameter set to the right value for your deployment target. - */ + /* Evaluate a NixOS configuration using this evaluation of Nixpkgs. + + With this function you can write, for example, a package that + depends on a custom virtual machine image. + + Parameter: A module, path or list of those that represent the + configuration of the NixOS system to be constructed. + + Result: An attribute set containing packages produced by this + evaluation of NixOS, such as toplevel, kernel and + initialRamdisk. + The result can be extended in the modules by defining + extra attributes in system.build. + + Example: + + let + myOS = pkgs.nixos ({ lib, pkgs, config, ... }: { + + config.services.nginx = { + enable = true; + # ... + }; + + # Use config.system.build to exports relevant parts of a + # configuration. The runner attribute should not be + # considered a fully general replacement for systemd + # functionality. + config.system.build.run-nginx = config.systemd.services.nginx.runner; + }); + in + myOS.run-nginx + + Unlike in plain NixOS, the nixpkgs.config, nixpkgs.overlays and + nixpkgs.system options will be ignored by default. Instead, + nixpkgs.pkgs will have the default value of pkgs as it was + constructed right after invoking the nixpkgs function (e.g. the + value of import <nixpkgs> { overlays = [./my-overlay.nix]; } + but not the value of (import <nixpkgs> {} // { extra = ...; }). + + If you do want to use the config.nixpkgs options, you are + probably better off by calling nixos/lib/eval-config.nix + directly, even though it is possible to set config.nixpkgs.pkgs. + + For more information about writing NixOS modules, see + https://nixos.org/nixos/manual/index.html#sec-writing-modules + + Note that you will need to have called Nixpkgs with the system + parameter set to the right value for your deployment target. + */ nixos = configuration: (import (self.path + "/nixos/lib/eval-config.nix") { inherit (pkgs.stdenv.hostPlatform) system; @@ -22154,6 +22193,8 @@ with pkgs; nixui = callPackage ../tools/package-management/nixui { node_webkit = nwjs_0_12; }; + nixdoc = callPackage ../tools/nix/nixdoc {}; + nix-bundle = callPackage ../tools/package-management/nix-bundle { }; nix-delegate = haskell.lib.justStaticExecutables haskellPackages.nix-delegate; @@ -22729,9 +22770,7 @@ with pkgs; tomb = callPackage ../os-specific/linux/tomb {}; - tomboy = callPackage ../applications/misc/tomboy { - mono = mono46; - }; + tomboy = callPackage ../applications/misc/tomboy { }; imatix_gsl = callPackage ../development/tools/imatix_gsl {}; @@ -22842,4 +22881,16 @@ with pkgs; }; tsung = callPackage ../applications/networking/tsung {}; + + qmk_firmware = callPackage ../development/misc/qmk_firmware { + avrgcc = pkgsCross.avr.buildPackages.gcc; + avrbinutils = pkgsCross.avr.buildPackages.binutils; + gcc-arm-embedded = pkgsCross.arm-embedded.buildPackages.gcc; + binutils-arm-embedded = pkgsCross.arm-embedded.buildPackages.binutils; + }; + + newlib = callPackage ../development/misc/newlib { }; + newlibCross = callPackage ../development/misc/newlib { + stdenv = crossLibcStdenv; + }; } diff --git a/pkgs/top-level/coq-packages.nix b/pkgs/top-level/coq-packages.nix index 75e9506ac049..2084140c3fd8 100644 --- a/pkgs/top-level/coq-packages.nix +++ b/pkgs/top-level/coq-packages.nix @@ -1,8 +1,4 @@ -{ lib, callPackage, newScope, recurseIntoAttrs -, gnumake3 -, ocamlPackages_4_02 -, ocamlPackages_4_05 -}: +{ lib, callPackage, newScope, recurseIntoAttrs, ocamlPackages_4_05 }: let mkCoqPackages' = self: coq: @@ -52,13 +48,19 @@ let in rec { + /* The function `mkCoqPackages` takes as input a derivation for Coq and produces + * a set of libraries built with that specific Coq. More libraries are known to + * this function than what is compatible with that version of Coq. Therefore, + * libraries that are not known to be compatible are removed (filtered out) from + * the resulting set. For meta-programming purposes (inpecting the derivations + * rather than building the libraries) this filtering can be disabled by setting + * a `dontFilter` attribute into the Coq derivation. + */ mkCoqPackages = coq: let self = mkCoqPackages' self coq; in - filterCoqPackages coq self; + if coq.dontFilter or false then self + else filterCoqPackages coq self; - coq_8_4 = callPackage ../applications/science/logic/coq/8.4.nix { - inherit (ocamlPackages_4_02) ocaml findlib lablgtk camlp5; - }; coq_8_5 = callPackage ../applications/science/logic/coq { ocamlPackages = ocamlPackages_4_05; version = "8.5pl3"; @@ -73,11 +75,15 @@ in rec { coq_8_8 = callPackage ../applications/science/logic/coq { version = "8.8.2"; }; + coq_8_9 = callPackage ../applications/science/logic/coq { + version = "8.9+beta1"; + }; coqPackages_8_5 = mkCoqPackages coq_8_5; coqPackages_8_6 = mkCoqPackages coq_8_6; coqPackages_8_7 = mkCoqPackages coq_8_7; coqPackages_8_8 = mkCoqPackages coq_8_8; + coqPackages_8_9 = mkCoqPackages coq_8_9; coqPackages = coqPackages_8_8; coq = coqPackages.coq; diff --git a/pkgs/top-level/dotnet-packages.nix b/pkgs/top-level/dotnet-packages.nix index ee1b94c8638d..bcfef9bdad88 100644 --- a/pkgs/top-level/dotnet-packages.nix +++ b/pkgs/top-level/dotnet-packages.nix @@ -210,8 +210,8 @@ let self = dotnetPackages // overrides; dotnetPackages = with self; { SharpFont = fetchNuGet { baseName = "SharpFont"; - version = "3.1.0"; - sha256 = "137y514i4zi0i0qsx7nv4ibl4kifbr8xr23rqdkwf7yxf88jjmh2"; + version = "4.0.1"; + sha256 = "1yd3cm4ww0hw2k3aymf792hp6skyg8qn491m2a3fhkzvsl8z7vs8"; outputFiles = [ "lib/*" "config/*" ]; }; diff --git a/pkgs/top-level/haskell-packages.nix b/pkgs/top-level/haskell-packages.nix index e654b35d258d..ebf1d264f590 100644 --- a/pkgs/top-level/haskell-packages.nix +++ b/pkgs/top-level/haskell-packages.nix @@ -7,9 +7,8 @@ let integerSimpleExcludes = [ "ghc7103Binary" "ghc821Binary" + "ghc844" "ghcjs" - "ghcjs710" - "ghcjs80" "ghcjs82" "ghcjs84" "integer-simple" @@ -47,28 +46,12 @@ in { ghc7103Binary = callPackage ../development/compilers/ghc/7.10.3-binary.nix { }; ghc821Binary = callPackage ../development/compilers/ghc/8.2.1-binary.nix { }; - ghc7103 = callPackage ../development/compilers/ghc/7.10.3.nix { - bootPkgs = packages.ghc7103Binary; - buildLlvmPackages = buildPackages.llvmPackages_35; - llvmPackages = pkgs.llvmPackages_35; - }; - ghc802 = callPackage ../development/compilers/ghc/8.0.2.nix { - bootPkgs = packages.ghc7103Binary; - inherit (buildPackages.python27Packages) sphinx; - buildLlvmPackages = buildPackages.llvmPackages_37; - llvmPackages = pkgs.llvmPackages_37; - }; ghc822 = callPackage ../development/compilers/ghc/8.2.2.nix { bootPkgs = packages.ghc821Binary; inherit (buildPackages.python3Packages) sphinx; buildLlvmPackages = buildPackages.llvmPackages_39; llvmPackages = pkgs.llvmPackages_39; }; - ghc843 = callPackage ../development/compilers/ghc/8.4.3.nix { - bootPkgs = packages.ghc821Binary; - buildLlvmPackages = buildPackages.llvmPackages_5; - llvmPackages = pkgs.llvmPackages_5; - }; ghc844 = callPackage ../development/compilers/ghc/8.4.4.nix { bootPkgs = packages.ghc821Binary; buildLlvmPackages = buildPackages.llvmPackages_5; @@ -79,31 +62,24 @@ in { buildLlvmPackages = buildPackages.llvmPackages_6; llvmPackages = pkgs.llvmPackages_6; }; + ghc862 = callPackage ../development/compilers/ghc/8.6.2.nix { + bootPkgs = packages.ghc822; + buildLlvmPackages = buildPackages.llvmPackages_6; + llvmPackages = pkgs.llvmPackages_6; + }; ghcHEAD = callPackage ../development/compilers/ghc/head.nix { bootPkgs = packages.ghc821Binary; buildLlvmPackages = buildPackages.llvmPackages_5; llvmPackages = pkgs.llvmPackages_5; }; ghcjs = compiler.ghcjs84; - # Use `import` because `callPackage inside`. - ghcjs710 = import ../development/compilers/ghcjs/7.10 { - bootPkgs = packages.ghc7103; - inherit (pkgs) cabal-install; - inherit (buildPackages) fetchgit fetchFromGitHub; - }; - # `import` on purpose; see above. - ghcjs80 = import ../development/compilers/ghcjs/8.0 { - bootPkgs = packages.ghc802; - inherit (pkgs) cabal-install; - inherit (buildPackages) fetchgit fetchFromGitHub; - }; ghcjs82 = callPackage ../development/compilers/ghcjs-ng { bootPkgs = packages.ghc822; ghcjsSrcJson = ../development/compilers/ghcjs-ng/8.2/git.json; stage0 = ../development/compilers/ghcjs-ng/8.2/stage0.nix; }; ghcjs84 = callPackage ../development/compilers/ghcjs-ng { - bootPkgs = packages.ghc843; + bootPkgs = packages.ghc844; ghcjsSrcJson = ../development/compilers/ghcjs-ng/8.4/git.json; stage0 = ../development/compilers/ghcjs-ng/8.4/stage0.nix; ghcjsDepOverrides = callPackage ../development/compilers/ghcjs-ng/8.4/dep-overrides.nix {}; @@ -126,22 +102,12 @@ in { # Always get compilers from `buildPackages` packages = let bh = buildPackages.haskell; in { - ghc7103 = callPackage ../development/haskell-modules { - buildHaskellPackages = bh.packages.ghc7103; - ghc = bh.compiler.ghc7103; - compilerConfig = callPackage ../development/haskell-modules/configuration-ghc-7.10.x.nix { }; - }; ghc7103Binary = callPackage ../development/haskell-modules { buildHaskellPackages = bh.packages.ghc7103Binary; ghc = bh.compiler.ghc7103Binary; compilerConfig = callPackage ../development/haskell-modules/configuration-ghc-7.10.x.nix { }; packageSetConfig = bootstrapPackageSet; }; - ghc802 = callPackage ../development/haskell-modules { - buildHaskellPackages = bh.packages.ghc802; - ghc = bh.compiler.ghc802; - compilerConfig = callPackage ../development/haskell-modules/configuration-ghc-8.0.x.nix { }; - }; ghc821Binary = callPackage ../development/haskell-modules { buildHaskellPackages = bh.packages.ghc821Binary; ghc = bh.compiler.ghc821Binary; @@ -168,6 +134,11 @@ in { ghc = bh.compiler.ghc861; compilerConfig = callPackage ../development/haskell-modules/configuration-ghc-8.6.x.nix { }; }; + ghc862 = callPackage ../development/haskell-modules { + buildHaskellPackages = bh.packages.ghc862; + ghc = bh.compiler.ghc862; + compilerConfig = callPackage ../development/haskell-modules/configuration-ghc-8.6.x.nix { }; + }; ghcHEAD = callPackage ../development/haskell-modules { buildHaskellPackages = bh.packages.ghcHEAD; ghc = bh.compiler.ghcHEAD; diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix index 9f9bba933a17..2f6992e1c9a5 100644 --- a/pkgs/top-level/ocaml-packages.nix +++ b/pkgs/top-level/ocaml-packages.nix @@ -1024,12 +1024,6 @@ let omake_rc1 = callPackage ../development/tools/ocaml/omake/0.9.8.6-rc1.nix { }; - verasco = callPackage ../development/tools/analysis/verasco ( - if system == "x86_64-linux" - then { tools = pkgs.pkgsi686Linux.stdenv.cc; } - else {} - ); - google-drive-ocamlfuse = callPackage ../applications/networking/google-drive-ocamlfuse { }; diff --git a/pkgs/top-level/perl-packages.nix b/pkgs/top-level/perl-packages.nix index c68e15aeb961..e94f8945d399 100644 --- a/pkgs/top-level/perl-packages.nix +++ b/pkgs/top-level/perl-packages.nix @@ -12103,19 +12103,19 @@ let }; PerconaToolkit = buildPerlPackage rec { - name = "Percona-Toolkit-3.0.11"; + name = "Percona-Toolkit-3.0.12"; src = fetchFromGitHub { owner = "percona"; repo = "percona-toolkit"; - rev = "6e5c5c5e6db0a32c6951c8f798c4547539cdab87"; - sha256 = "18wxvp7psqrx0zdvg47azrals572hv9fx1s3p0q65s87lnk3q63l"; + rev = "3.0.12"; + sha256 = "0xk4h4dzl80kf97lbx0nznx9ajrb6kkg7k3iwca3rj6f3rqggv9y"; }; outputs = [ "out" ]; buildInputs = [ DBDmysql DBI IOSocketSSL TermReadKey TimeHiRes ]; meta = { description = ''Collection of advanced command-line tools to perform a variety of MySQL and system tasks.''; homepage = http://www.percona.com/software/percona-toolkit; - license = with stdenv.lib.licenses; [ lgpl2 ]; + license = with stdenv.lib.licenses; [ gpl2 ]; platforms = stdenv.lib.platforms.linux; maintainers = with stdenv.lib.maintainers; [ izorkin ]; }; @@ -12482,7 +12482,8 @@ let export PERL_MB_OPT="--install_base=$out --prefix=$out" substituteInPlace Po4aBuilder.pm --replace "\$self->install_sets(\$self->installdirs)->{'bindoc'}" "'$out/share/man/man1'" ''; - buildPhase = "perl Build.PL --install_base=$out; ./Build build"; + + buildPhase = "perl Build.PL --install_base=$out --install_path=\"lib=$out/${perl.libPrefix}\"; ./Build build"; installPhase = "./Build install"; checkPhase = '' export SGML_CATALOG_FILES=${pkgs.docbook_sgml_dtd_41}/sgml/dtd/docbook-4.1/docbook.cat diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 93aee66a567e..05ac04a22bce 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -212,6 +212,8 @@ in { aws-adfs = callPackage ../development/python-modules/aws-adfs { }; + atomman = callPackage ../development/python-modules/atomman { }; + # packages defined elsewhere amazon_kclpy = callPackage ../development/python-modules/amazon_kclpy { }; @@ -264,6 +266,8 @@ in { brotli = callPackage ../development/python-modules/brotli { }; + broadlink = callPackage ../development/python-modules/broadlink { }; + browser-cookie3 = callPackage ../development/python-modules/browser-cookie3 { }; browsermob-proxy = disabledIf isPy3k (callPackage ../development/python-modules/browsermob-proxy {}); @@ -284,6 +288,8 @@ in { btchip = callPackage ../development/python-modules/btchip { }; + datamodeldict = callPackage ../development/python-modules/datamodeldict { }; + dbf = callPackage ../development/python-modules/dbf { }; dbfread = callPackage ../development/python-modules/dbfread { }; @@ -334,6 +340,8 @@ in { eradicate = callPackage ../development/python-modules/eradicate { }; + fastpbkdf2 = callPackage ../development/python-modules/fastpbkdf2 { }; + fido2 = callPackage ../development/python-modules/fido2 { }; filterpy = callPackage ../development/python-modules/filterpy { }; @@ -428,6 +436,8 @@ in { nvchecker = callPackage ../development/python-modules/nvchecker { }; + numericalunits = callPackage ../development/python-modules/numericalunits { }; + oauthenticator = callPackage ../development/python-modules/oauthenticator { }; ordered-set = callPackage ../development/python-modules/ordered-set { }; @@ -652,6 +662,8 @@ in { spglib = callPackage ../development/python-modules/spglib { }; + sslib = callPackage ../development/python-modules/sslib { }; + statistics = callPackage ../development/python-modules/statistics { }; sumo = callPackage ../development/python-modules/sumo { }; @@ -664,6 +676,8 @@ in { hdf5 = pkgs.hdf5.override { zlib = pkgs.zlib; }; }; + trueskill = callPackage ../development/python-modules/trueskill { }; + trustme = callPackage ../development/python-modules/trustme {}; trio = callPackage ../development/python-modules/trio {}; @@ -702,12 +716,18 @@ in { aiofiles = callPackage ../development/python-modules/aiofiles { }; + aioh2 = callPackage ../development/python-modules/aioh2 { }; + aiohttp = callPackage ../development/python-modules/aiohttp { }; aiohttp-cors = callPackage ../development/python-modules/aiohttp/cors.nix { }; aiohttp-jinja2 = callPackage ../development/python-modules/aiohttp-jinja2 { }; + aiohttp-remotes = callPackage ../development/python-modules/aiohttp-remotes { }; + + aioprocessing = callPackage ../development/python-modules/aioprocessing { }; + ajpy = callPackage ../development/python-modules/ajpy { }; alabaster = callPackage ../development/python-modules/alabaster {}; @@ -971,12 +991,8 @@ in { cypari2 = callPackage ../development/python-modules/cypari2 { }; - dlib = buildPythonPackage rec { - inherit (pkgs.dlib) name src nativeBuildInputs meta buildInputs; - - patches = [ ../development/python-modules/dlib/build-cores.patch ]; - - checkInputs = with self; [ pytest ]; + dlib = callPackage ../development/python-modules/dlib { + inherit (pkgs) dlib; }; datadog = callPackage ../development/python-modules/datadog {}; @@ -1632,6 +1648,8 @@ in { inherit (pkgs.gitAndTools) git-annex; }; + python-gitlab = callPackage ../development/python-modules/python-gitlab { }; + google-cloud-sdk = callPackage ../tools/admin/google-cloud-sdk { }; google-cloud-sdk-gce = callPackage ../tools/admin/google-cloud-sdk { with-gce=true; }; @@ -1854,6 +1872,8 @@ in { poyo = callPackage ../development/python-modules/poyo { }; + priority = callPackage ../development/python-modules/priority { }; + prov = callPackage ../development/python-modules/prov { }; pudb = callPackage ../development/python-modules/pudb { }; @@ -2284,20 +2304,8 @@ in { grappelli_safe = callPackage ../development/python-modules/grappelli_safe { }; - pytorch = let - # Fails with CUDA 9.1 and GCC 6.4: - # https://github.com/pytorch/pytorch/issues/5831 - # https://devtalk.nvidia.com/default/topic/1028112 - # We should be able to remove this when CUDA 9.2 is released. - cudatoolkit_9 = pkgs.cudatoolkit_9.override { - gcc6 = pkgs.gcc5; - }; - in callPackage ../development/python-modules/pytorch { + pytorch = callPackage ../development/python-modules/pytorch { cudaSupport = pkgs.config.cudaSupport or false; - cudatoolkit = cudatoolkit_9; - cudnn = pkgs.cudnn_cudatoolkit_9.override { - inherit cudatoolkit_9; - }; }; pytorchWithCuda = self.pytorch.override { @@ -2454,6 +2462,8 @@ in { html5lib = callPackage ../development/python-modules/html5lib { }; + httmock = callPackage ../development/python-modules/httmock { }; + http_signature = callPackage ../development/python-modules/http_signature { }; httpbin = callPackage ../development/python-modules/httpbin { }; @@ -4453,22 +4463,24 @@ in { }; }; + owslib = callPackage ../development/python-modules/owslib { }; + PyICU = buildPythonPackage rec { - name = "PyICU-2.0.3"; + name = "PyICU-2.2"; src = pkgs.fetchurl { url = "mirror://pypi/P/PyICU/${name}.tar.gz"; - sha256 = "0pzss3l0b0vcsyr7wlqdd6pkcqldspajfgd9k2iijf6r152d2ln4"; + sha256 = "0wq9y5fi1ighgf5aws9nr87vi1w44p7q1k83rx2y3qj5d2xyhspa"; }; patches = [ (pkgs.fetchpatch { - url = https://sources.debian.org/data/main/p/pyicu/2.0.3-1/debian/patches/icu_test.patch; + url = https://sources.debian.org/data/main/p/pyicu/2.2-1/debian/patches/icu_test.patch; sha256 = "1iavdkyqixm9i753svl17barla93b7jzgkw09dn3hnggamx7zwx9"; }) ]; - buildInputs = [ pkgs.icu self.pytest ]; + buildInputs = [ pkgs.icu60 self.pytest ]; propagatedBuildInputs = [ self.six ]; @@ -4682,7 +4694,11 @@ in { PyStemmer = callPackage ../development/python-modules/pystemmer {}; - Pyro = callPackage ../development/python-modules/pyro { }; + serpent = callPackage ../development/python-modules/serpent { }; + + selectors34 = callPackage ../development/python-modules/selectors34 { }; + + Pyro4 = callPackage ../development/python-modules/pyro4 { }; pyrsistent = buildPythonPackage (rec { name = "pyrsistent-0.11.12"; @@ -6552,7 +6568,7 @@ in { }; in if isPy3k then py3 else py2; - pythondaemon = callPackage ../development/python-modules/python-daemon { }; + python-daemon = callPackage ../development/python-modules/python-daemon { }; sympy = callPackage ../development/python-modules/sympy { }; @@ -6745,23 +6761,7 @@ in { }; }; - - sh = buildPythonPackage rec { - name = "sh-1.11"; - - src = pkgs.fetchurl { - url = "mirror://pypi/s/sh/${name}.tar.gz"; - sha256 = "590fb9b84abf8b1f560df92d73d87965f1e85c6b8330f8a5f6b336b36f0559a4"; - }; - - doCheck = false; - - meta = { - description = "Python subprocess interface"; - homepage = https://pypi.python.org/pypi/sh/; - }; - }; - + sh = callPackage ../development/python-modules/sh { }; sipsimple = buildPythonPackage rec { name = "sipsimple-${version}"; @@ -10917,6 +10917,10 @@ EOF todoist = callPackage ../development/python-modules/todoist { }; + zstd = callPackage ../development/python-modules/zstd { + inherit (pkgs) zstd pkgconfig; + }; + zxcvbn-python = callPackage ../development/python-modules/zxcvbn-python { }; incremental = callPackage ../development/python-modules/incremental { }; diff --git a/pkgs/top-level/release-cross.nix b/pkgs/top-level/release-cross.nix index 89a8af6794f6..058182392e9b 100644 --- a/pkgs/top-level/release-cross.nix +++ b/pkgs/top-level/release-cross.nix @@ -12,6 +12,12 @@ with import ./release-lib.nix { inherit supportedSystems scrubJobs; }; let nativePlatforms = all; + embedded = { + buildPackages.binutils = nativePlatforms; + buildPackages.gcc = nativePlatforms; + libcCross = nativePlatforms; + }; + common = { buildPackages.binutils = nativePlatforms; gmp = nativePlatforms; @@ -24,7 +30,7 @@ let buildPackages.gcc = nativePlatforms; coreutils = nativePlatforms; haskell.packages.ghcHEAD.hello = nativePlatforms; - haskell.packages.ghc822.hello = nativePlatforms; + haskell.packages.ghc844.hello = nativePlatforms; }; linuxCommon = lib.recursiveUpdate gnuCommon { @@ -81,11 +87,11 @@ in # good idea lest there be some irrelevant pass-through debug attrs that # cause false negatives. testEqualOne = path: system: let - f = path: attrs: builtins.toString (lib.getAttrFromPath path (allPackages attrs)); + f = path: crossSystem: system: builtins.toString (lib.getAttrFromPath path (pkgsForCross crossSystem system)); in assertTrue ( - f path { inherit system; } + f path null system == - f (["buildPackages"] ++ path) { inherit system crossSystem; } + f (["buildPackages"] ++ path) crossSystem system ); testEqual = path: systems: forMatchingSystems systems (testEqualOne path); @@ -134,12 +140,19 @@ in android64 = mapTestOnCross lib.systems.examples.aarch64-android-prebuilt (linuxCommon // { }); + avr = mapTestOnCross lib.systems.examples.avr embedded; + arm-embedded = mapTestOnCross lib.systems.examples.arm-embedded embedded; + powerpc-embedded = mapTestOnCross lib.systems.examples.ppc-embedded embedded; + aarch64-embedded = mapTestOnCross lib.systems.examples.aarch64-embedded embedded; + i686-embedded = mapTestOnCross lib.systems.examples.i686-embedded embedded; + x86_64-embedded = mapTestOnCross lib.systems.examples.x86_64-embedded embedded; + /* Cross-built bootstrap tools for every supported platform */ bootstrapTools = let tools = import ../stdenv/linux/make-bootstrap-tools-cross.nix { system = "x86_64-linux"; }; maintainers = [ lib.maintainers.dezgeg ]; mkBootstrapToolsJob = drv: - assert lib.elem drv.system (supportedSystems ++ [ "aarch64-linux" ]); + assert lib.elem drv.system supportedSystems; hydraJob' (lib.addMetaAttrs { inherit maintainers; } drv); in lib.mapAttrsRecursiveCond (as: !lib.isDerivation as) (name: mkBootstrapToolsJob) tools; } diff --git a/pkgs/top-level/release-lib.nix b/pkgs/top-level/release-lib.nix index 623c9d9cb000..957de2dcc307 100644 --- a/pkgs/top-level/release-lib.nix +++ b/pkgs/top-level/release-lib.nix @@ -11,8 +11,6 @@ in with lib; rec { - allPackages = args: packageSet (args // nixpkgsArgs); - pkgs = packageSet (lib.recursiveUpdate { system = "x86_64-linux"; config.allowUnsupportedSystem = true; } nixpkgsArgs); inherit lib; @@ -23,29 +21,52 @@ rec { /* !!! Hack: poor man's memoisation function. Necessary to prevent Nixpkgs from being evaluated again and again for every job/platform pair. */ - pkgsFor = system: - if system == "x86_64-linux" then pkgs_x86_64_linux - else if system == "i686-linux" then pkgs_i686_linux - else if system == "aarch64-linux" then pkgs_aarch64_linux - else if system == "armv6l-linux" then pkgs_armv6l_linux - else if system == "armv7l-linux" then pkgs_armv7l_linux - else if system == "x86_64-darwin" then pkgs_x86_64_darwin - else if system == "x86_64-freebsd" then pkgs_x86_64_freebsd - else if system == "i686-freebsd" then pkgs_i686_freebsd - else if system == "i686-cygwin" then pkgs_i686_cygwin - else if system == "x86_64-cygwin" then pkgs_x86_64_cygwin - else abort "unsupported system type: ${system}"; - - pkgs_x86_64_linux = allPackages { system = "x86_64-linux"; }; - pkgs_i686_linux = allPackages { system = "i686-linux"; }; - pkgs_aarch64_linux = allPackages { system = "aarch64-linux"; }; - pkgs_armv6l_linux = allPackages { system = "armv6l-linux"; }; - pkgs_armv7l_linux = allPackages { system = "armv7l-linux"; }; - pkgs_x86_64_darwin = allPackages { system = "x86_64-darwin"; }; - pkgs_x86_64_freebsd = allPackages { system = "x86_64-freebsd"; }; - pkgs_i686_freebsd = allPackages { system = "i686-freebsd"; }; - pkgs_i686_cygwin = allPackages { system = "i686-cygwin"; }; - pkgs_x86_64_cygwin = allPackages { system = "x86_64-cygwin"; }; + mkPkgsFor = crossSystem: let + packageSet' = args: packageSet (args // { inherit crossSystem; } // nixpkgsArgs); + + pkgs_x86_64_linux = packageSet' { system = "x86_64-linux"; }; + pkgs_i686_linux = packageSet' { system = "i686-linux"; }; + pkgs_aarch64_linux = packageSet' { system = "aarch64-linux"; }; + pkgs_armv6l_linux = packageSet' { system = "armv6l-linux"; }; + pkgs_armv7l_linux = packageSet' { system = "armv7l-linux"; }; + pkgs_x86_64_darwin = packageSet' { system = "x86_64-darwin"; }; + pkgs_x86_64_freebsd = packageSet' { system = "x86_64-freebsd"; }; + pkgs_i686_freebsd = packageSet' { system = "i686-freebsd"; }; + pkgs_i686_cygwin = packageSet' { system = "i686-cygwin"; }; + pkgs_x86_64_cygwin = packageSet' { system = "x86_64-cygwin"; }; + + in system: + if system == "x86_64-linux" then pkgs_x86_64_linux + else if system == "i686-linux" then pkgs_i686_linux + else if system == "aarch64-linux" then pkgs_aarch64_linux + else if system == "armv6l-linux" then pkgs_armv6l_linux + else if system == "armv7l-linux" then pkgs_armv7l_linux + else if system == "x86_64-darwin" then pkgs_x86_64_darwin + else if system == "x86_64-freebsd" then pkgs_x86_64_freebsd + else if system == "i686-freebsd" then pkgs_i686_freebsd + else if system == "i686-cygwin" then pkgs_i686_cygwin + else if system == "x86_64-cygwin" then pkgs_x86_64_cygwin + else abort "unsupported system type: ${system}"; + + pkgsFor = pkgsForCross null; + + + # More poor man's memoisation + pkgsForCross = let + examplesByConfig = lib.flip lib.mapAttrs' + (builtins.removeAttrs lib.systems.examples [ "riscv" ]) + (_: crossSystem: nameValuePair crossSystem.config { + inherit crossSystem; + pkgsFor = mkPkgsFor crossSystem; + }); + native = mkPkgsFor null; + in crossSystem: let + candidate = examplesByConfig.${crossSystem.config} or null; + in if crossSystem == null + then native + else if candidate != null && lib.matchAttrs crossSystem candidate.crossSystem + then candidate.pkgsFor + else mkPkgsFor crossSystem; # uncached fallback # Given a list of 'meta.platforms'-style patterns, return the sublist of @@ -90,30 +111,32 @@ rec { platform as an argument . We return an attribute set containing a derivation for each supported platform, i.e. ‘{ x86_64-linux = f pkgs_x86_64_linux; i686-linux = f pkgs_i686_linux; ... }’. */ - testOn = metaPatterns: f: forMatchingSystems metaPatterns - (system: hydraJob' (f (pkgsFor system))); + testOn = testOnCross null; /* Similar to the testOn function, but with an additional - 'crossSystem' parameter for allPackages, defining the target + 'crossSystem' parameter for packageSet', defining the target platform for cross builds. */ testOnCross = crossSystem: metaPatterns: f: forMatchingSystems metaPatterns - (system: hydraJob' (f (allPackages { inherit system crossSystem; }))); + (system: hydraJob' (f (pkgsForCross crossSystem system))); /* Given a nested set where the leaf nodes are lists of platforms, map each leaf node to `testOn [platforms...] (pkgs: pkgs.<attrPath>)'. */ - mapTestOn = mapAttrsRecursive - (path: metaPatterns: testOn metaPatterns (pkgs: getAttrFromPath path pkgs)); + mapTestOn = _mapTestOnHelper id null; - /* Similar to the testOn function, but with an additional 'crossSystem' - * parameter for allPackages, defining the target platform for cross builds, - * and triggering the build of the host derivation (cross built - crossDrv). */ - mapTestOnCross = crossSystem: mapAttrsRecursive + _mapTestOnHelper = f: crossSystem: mapAttrsRecursive (path: metaPatterns: testOnCross crossSystem metaPatterns - (pkgs: addMetaAttrs { maintainers = crossMaintainers; } (getAttrFromPath path pkgs))); + (pkgs: f (getAttrFromPath path pkgs))); + + + /* Similar to the testOn function, but with an additional 'crossSystem' + * parameter for packageSet', defining the target platform for cross builds, + * and triggering the build of the host derivation. */ + mapTestOnCross = _mapTestOnHelper + (addMetaAttrs { maintainers = crossMaintainers; }); /* Recursively map a (nested) set of derivations to an isomorphic diff --git a/pkgs/top-level/stage.nix b/pkgs/top-level/stage.nix index 37724a870a30..4e6531286ee5 100644 --- a/pkgs/top-level/stage.nix +++ b/pkgs/top-level/stage.nix @@ -150,7 +150,7 @@ let # All packages built for i686 Linux. # Used by wine, firefox with debugging version of Flash, ... - pkgsi686Linux = assert stdenv.hostPlatform.isLinux; nixpkgsFun { + pkgsi686Linux = if stdenv.hostPlatform.isLinux && stdenv.hostPlatform.isx86 then nixpkgsFun { inherit overlays config; ${if stdenv.hostPlatform == stdenv.buildPlatform then "localSystem" else "crossSystem"} = { @@ -158,7 +158,7 @@ let cpu = lib.systems.parse.cpuTypes.i686; }; }; - }; + } else throw "i686 Linux package set can only be used with the x86 family."; # Extend the package set with zero or more overlays. This preserves # preexisting overlays. Prefer to initialize with the right overlays |