Merge branch 'master' into staging

* master: (39 commits)
  pythonPackages: rename dns -> dnspython
  awesome: fix LUA_PATH/LUA_CPATH to lgi [now for version 3.5]
  qt4: fix qmake on darwin and delete custom install phase
  python.buildEnv: always include the $out output
  nix-bash-completions: lazy load aware install
  borg: 1.1.1 -> 1.1.3
  nixos/programs/bash: document that /etc/bash_completion.d is obsolete
  ocamlPackages.markup: 0.7.4 -> 0.7.5
  hhvm: 3.21 -> 3.23.2
  ocamlPackages.ulex: 1.1 -> 1.2
  notmuch: 0.25.2 -> 0.25.3
  gmime3: 3.0.1 -> 3.0.5
  qt4: fix darwin install phase
  nixos/programs/bash: Let bash-completion lazy load scripts
  Revert "gmime: 3.0.1 -> 3.0.5"
  rawtherapee: delete unused files
  pythonPackages: rename dns -> dnspython
  nixpkgs: remove sqlite/kyotocabinet deps for leveldb
  tor-browser-bundle-bin: 7.0.10 -> 7.0.11
  networkmanager: remove restart after suspend from resume
  ...

3 files changed, 18 insertions, 14 deletions

diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 2be5e568fe7c..8840d70bc131 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -6277,7 +6277,7 @@ with pkgs;
 
   metaocaml_3_09 = callPackage ../development/compilers/ocaml/metaocaml-3.09.nix { };
 
-  ber_metaocaml_003 = callPackage ../development/compilers/ocaml/ber-metaocaml-003.nix { };
+  ber_metaocaml = callPackage ../development/compilers/ocaml/ber-metaocaml-104.nix { };
 
   ocaml_make = callPackage ../development/ocaml-modules/ocamlmake { };
 
@@ -13923,8 +13923,7 @@ with pkgs;
   altcoins = recurseIntoAttrs ( callPackage ../applications/altcoins { } );
   bitcoin = altcoins.bitcoin;
   bitcoin-xt = altcoins.bitcoin-xt;
-
-  cryptop = callPackage ../applications/altcoins/cryptop { };
+  cryptop = altcoins.cryptop;
 
   libbitcoin = callPackage ../tools/misc/libbitcoin/libbitcoin.nix {
     secp256k1 = secp256k1.override { enableECDH = true; };
@@ -16527,14 +16526,8 @@ with pkgs;
 
   rawtherapee = callPackage ../applications/graphics/rawtherapee {
     fftw = fftwSinglePrec;
-    cmake = cmake_2_8; # problems after 3.4 -> 3.6.0
   };
 
-  rawtherapee-git = lowPrio (callPackage ../applications/graphics/rawtherapee/dev.nix {
-    fftw = fftwSinglePrec;
-    cmake = cmake_2_8; # problems after 3.4 -> 3.6.0
-  });
-
   rclone = callPackage ../applications/networking/sync/rclone { };
 
   rcs = callPackage ../applications/version-management/rcs { };
@@ -19448,6 +19441,8 @@ with pkgs;
 
   kompose = callPackage ../applications/networking/cluster/kompose { };
 
+  kontemplate = callPackage ../applications/networking/cluster/kontemplate { };
+
   kops = callPackage ../applications/networking/cluster/kops { };
 
   lilypond = callPackage ../misc/lilypond { guile = guile_1_8; };
diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix
index 2003f30ef2e2..52a921dcc0ed 100644
--- a/pkgs/top-level/ocaml-packages.nix
+++ b/pkgs/top-level/ocaml-packages.nix
@@ -369,7 +369,7 @@ let
 
     magick = callPackage ../development/ocaml-modules/magick { };
 
-    markup = callPackage ../development/ocaml-modules/markup { lwt = lwt2; };
+    markup = callPackage ../development/ocaml-modules/markup { lwt = ocaml_lwt; };
 
     menhir = callPackage ../development/ocaml-modules/menhir { };
 
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 8affc1249bfb..5b10697deb43 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -4523,7 +4523,8 @@ in {
 
   discogs_client = callPackage ../development/python-modules/discogs_client { };
 
-  dns = callPackage ../development/python-modules/dns { };
+  dnspython = callPackage ../development/python-modules/dnspython { };
+  dns = self.dnspython; # Alias for compatibility, 2017-12-10
 
   docker = callPackage ../development/python-modules/docker {};
 
@@ -5600,6 +5601,14 @@ in {
     };
   };
 
+  gurobipy = if stdenv.system == "x86_64-darwin"
+  then callPackage ../development/python-modules/gurobipy/darwin.nix {
+    inherit (pkgs.darwin) cctools insert_dylib;
+  }
+  else if stdenv.system == "x86_64-linux"
+  then callPackage ../development/python-modules/gurobipy/linux.nix {}
+  else throw "gurobipy not yet supported on ${stdenv.system}";
+
   helper = buildPythonPackage rec {
     pname = "helper";
     version = "2.4.1";
@@ -11830,7 +11839,7 @@ in {
     name = "sleekxmpp-${version}";
     version = "1.3.1";
 
-    propagatedBuildInputs = with self ; [ dns pyasn1 ];
+    propagatedBuildInputs = with self ; [ dnspython pyasn1 ];
 
     src = pkgs.fetchurl {
       url = "mirror://pypi/s/sleekxmpp/${name}.tar.gz";
@@ -16674,7 +16683,7 @@ in {
 
     buildInputs = with self; [ nose mock pyopenssl ];
 
-    propagatedBuildInputs = with self; [ urllib3 dns];
+    propagatedBuildInputs = with self; [ urllib3 dnspython ];
 
     postPatch = ''
       sed -i '19s/dns/"dnspython"/' setup.py
@@ -18544,7 +18553,7 @@ in {
 
     nativeBuildInputs = [ pkgs.pkgconfig ];
     buildInputs = with pkgs; [ alsaLib ffmpeg libv4l sqlite libvpx ];
-    propagatedBuildInputs = with self; [ cython pkgs.openssl dns dateutil xcaplib msrplib lxml python-otr ];
+    propagatedBuildInputs = with self; [ cython pkgs.openssl dnspython dateutil xcaplib msrplib lxml python-otr ];
   };