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authorJeffrey David Johnson <jefdaj@gmail.com>2015-05-22 17:51:24 -0700
committerPeter Simons <simons@cryp.to>2015-06-17 23:19:56 +0200
commit93a742fd28bb1dca4091478755b2f30e93d84d2e (patch)
tree604fb14a889014ca297027899989848a2c0193d8 /pkgs/build-support
parent97db35a3b46600e6a450320d2006e6a995e683bc (diff)
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R: add support for Bioconductor packages
Diffstat (limited to 'pkgs/build-support')
-rw-r--r--pkgs/build-support/fetchurl/mirrors.nix15
1 files changed, 15 insertions, 0 deletions
diff --git a/pkgs/build-support/fetchurl/mirrors.nix b/pkgs/build-support/fetchurl/mirrors.nix
index 2a3dbb40a2b8..5507eba965f2 100644
--- a/pkgs/build-support/fetchurl/mirrors.nix
+++ b/pkgs/build-support/fetchurl/mirrors.nix
@@ -289,6 +289,21 @@ rec {
     ftp://ftp.xemacs.org/sites/metalab.unc.edu/
   ];
 
+  # Bioconductor mirrors (from http://bioconductor.org/about/mirrors)
+  # The commented-out ones don't seem to allow direct package downloads;
+  # they serve error messages that result in hash mismatches instead.
+  bioc = [
+    # http://bioc.ism.ac.jp/3.0/bioc/
+    # http://bioc.openanalytics.eu/3.0/bioc/
+    # http://bioconductor.fmrp.usp.br/3.0/bioc/
+    # http://mirror.aarnet.edu.au/pub/bioconductor/3.0/bioc/
+    # http://watson.nci.nih.gov/bioc_mirror/3.0/bioc/
+    http://bioconductor.jp/packages/3.0/bioc/
+    http://bioconductor.statistik.tu-dortmund.de/packages/3.0/bioc/
+    http://mirrors.ebi.ac.uk/bioconductor/packages/3.0/bioc/
+    http://mirrors.ustc.edu.cn/bioc/3.0/bioc/
+  ];
+
   # CRAN mirrors (from http://cran.r-project.org/mirrors.html)
   cran = [
     http://cran.r-project.org/