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author | Arcadio Rubio García <arc@well.ox.ac.uk> | 2018-01-23 13:01:13 +0000 |
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committer | Arcadio Rubio García <arc@well.ox.ac.uk> | 2018-01-24 16:16:46 +0000 |
commit | a7333e9cedc4ff42e761c65c1a88fb4ce493c0a7 (patch) | |
tree | 7244b7840b10724205fa4dbf3eddacd089fa0e4b /pkgs/applications | |
parent | 1d479088792e8a5999c4ffcb747653a53c1e78fe (diff) | |
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kallisto: init at 0.43.1
Diffstat (limited to 'pkgs/applications')
-rw-r--r-- | pkgs/applications/science/biology/kallisto/default.nix | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/kallisto/default.nix b/pkgs/applications/science/biology/kallisto/default.nix new file mode 100644 index 000000000000..d80ffea9a780 --- /dev/null +++ b/pkgs/applications/science/biology/kallisto/default.nix @@ -0,0 +1,25 @@ +{ stdenv, fetchFromGitHub, cmake, hdf5, zlib }: + +stdenv.mkDerivation rec { + name = "kallisto-${version}"; + version = "0.43.1"; + + src = fetchFromGitHub { + repo = "kallisto"; + owner = "pachterlab"; + rev = "v${version}"; + sha256 = "04697pf7jvy7vw126s1rn09q4iab9223jvb1nb0jn7ilwkq7pgwz"; + }; + + nativeBuildInputs = [ cmake ]; + + buildInputs = [ hdf5 zlib ]; + + meta = with stdenv.lib; { + description = "kallisto is a program for quantifying abundances of transcripts from RNA-Seq data"; + homepage = https://pachterlab.github.io/kallisto; + license = licenses.bsd2; + platforms = platforms.linux; + maintainers = [ maintainers.arcadio ]; + }; +} |